Query 020663
Match_columns 323
No_of_seqs 325 out of 1189
Neff 11.1
Searched_HMMs 46136
Date Fri Mar 29 04:10:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020663.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020663hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 99.9 1.1E-24 2.4E-29 182.5 16.6 213 38-308 82-294 (294)
2 PLN02679 hydrolase, alpha/beta 99.9 1.2E-23 2.5E-28 180.4 17.3 70 240-309 284-358 (360)
3 PRK03592 haloalkane dehalogena 99.9 4.1E-23 9E-28 173.0 15.6 214 38-310 73-291 (295)
4 PLN02965 Probable pheophorbida 99.9 3.9E-23 8.4E-28 169.4 14.5 67 243-309 188-254 (255)
5 KOG1454 Predicted hydrolase/ac 99.9 4.3E-23 9.3E-28 172.3 13.4 250 2-309 70-325 (326)
6 KOG4178 Soluble epoxide hydrol 99.9 5.6E-23 1.2E-27 164.8 13.3 225 37-308 92-320 (322)
7 PRK06765 homoserine O-acetyltr 99.9 3.7E-22 8.1E-27 170.7 19.1 241 33-307 135-387 (389)
8 PLN02578 hydrolase 99.9 4.7E-22 1E-26 170.3 17.3 222 38-306 132-353 (354)
9 KOG4409 Predicted hydrolase/ac 99.9 5.2E-22 1.1E-26 159.7 12.2 215 41-307 143-363 (365)
10 TIGR02240 PHA_depoly_arom poly 99.9 1.5E-21 3.3E-26 162.0 15.4 68 242-310 201-268 (276)
11 PRK10673 acyl-CoA esterase; Pr 99.9 5.3E-21 1.1E-25 157.0 18.0 65 243-307 190-254 (255)
12 PRK10349 carboxylesterase BioH 99.9 3.6E-21 7.8E-26 158.0 16.2 69 239-307 187-255 (256)
13 PRK07581 hypothetical protein; 99.9 6.4E-21 1.4E-25 162.8 18.1 71 239-309 266-337 (339)
14 TIGR03343 biphenyl_bphD 2-hydr 99.9 1.4E-21 2.9E-26 162.9 13.3 68 239-306 214-281 (282)
15 TIGR01392 homoserO_Ac_trn homo 99.9 8.4E-21 1.8E-25 162.6 17.1 68 239-306 279-351 (351)
16 PLN03087 BODYGUARD 1 domain co 99.9 1.6E-20 3.5E-25 163.5 18.8 65 243-307 413-478 (481)
17 PRK00870 haloalkane dehalogena 99.9 2.8E-21 6E-26 162.5 13.5 66 242-308 233-301 (302)
18 PRK00175 metX homoserine O-ace 99.9 1.8E-20 3.8E-25 161.8 18.7 72 239-310 300-376 (379)
19 PLN03084 alpha/beta hydrolase 99.9 1.1E-20 2.4E-25 161.4 17.0 203 38-306 177-382 (383)
20 PRK06489 hypothetical protein; 99.9 2.6E-20 5.7E-25 160.0 19.1 70 239-309 283-358 (360)
21 PRK03204 haloalkane dehalogena 99.9 7E-21 1.5E-25 158.4 15.0 58 248-305 227-285 (286)
22 PRK08775 homoserine O-acetyltr 99.9 1.5E-20 3.3E-25 160.4 15.9 67 243-309 272-340 (343)
23 TIGR03056 bchO_mg_che_rel puta 99.9 1.3E-20 2.9E-25 156.6 14.3 66 241-306 213-278 (278)
24 TIGR03611 RutD pyrimidine util 99.8 4E-20 8.6E-25 151.7 16.1 67 240-306 190-256 (257)
25 PF00561 Abhydrolase_1: alpha/ 99.8 4E-20 8.6E-25 149.2 15.2 64 239-302 166-229 (230)
26 PLN02385 hydrolase; alpha/beta 99.8 7.6E-20 1.7E-24 156.6 16.7 70 240-309 271-346 (349)
27 PRK11126 2-succinyl-6-hydroxy- 99.8 5.3E-20 1.2E-24 149.8 14.6 53 40-92 48-101 (242)
28 PF12697 Abhydrolase_6: Alpha/ 99.8 1.7E-19 3.6E-24 144.9 17.0 181 38-300 46-228 (228)
29 TIGR01250 pro_imino_pep_2 prol 99.8 1.8E-19 3.8E-24 150.3 16.6 67 239-306 222-288 (288)
30 PLN02894 hydrolase, alpha/beta 99.8 3.9E-19 8.4E-24 154.1 17.3 73 239-312 316-389 (402)
31 TIGR01738 bioH putative pimelo 99.8 2.3E-19 5.1E-24 145.9 14.9 67 239-305 179-245 (245)
32 TIGR02427 protocat_pcaD 3-oxoa 99.8 1.7E-19 3.7E-24 147.1 14.0 67 240-306 185-251 (251)
33 PLN02298 hydrolase, alpha/beta 99.8 3.1E-18 6.7E-23 145.8 17.4 70 241-310 244-319 (330)
34 PHA02857 monoglyceride lipase; 99.8 2.4E-18 5.2E-23 142.9 15.9 69 240-308 201-273 (276)
35 TIGR03695 menH_SHCHC 2-succiny 99.8 2.9E-18 6.3E-23 139.7 14.9 66 240-306 186-251 (251)
36 PLN02211 methyl indole-3-aceta 99.8 5.5E-18 1.2E-22 139.8 14.4 63 245-308 207-270 (273)
37 PRK10749 lysophospholipase L2; 99.8 2.8E-18 6.1E-23 145.7 12.7 67 242-308 253-329 (330)
38 PRK14875 acetoin dehydrogenase 99.8 1.1E-17 2.3E-22 145.0 16.4 66 239-307 305-370 (371)
39 PLN02980 2-oxoglutarate decarb 99.8 8.4E-18 1.8E-22 167.1 17.3 73 239-312 1559-1643(1655)
40 KOG2382 Predicted alpha/beta h 99.8 1.4E-17 3.1E-22 134.0 12.7 65 245-309 250-314 (315)
41 KOG2984 Predicted hydrolase [G 99.7 1.9E-18 4.1E-23 127.9 6.3 177 43-308 99-276 (277)
42 TIGR01249 pro_imino_pep_1 prol 99.7 6.3E-17 1.4E-21 136.1 15.6 56 39-94 76-131 (306)
43 PLN02511 hydrolase 99.7 9.5E-17 2.1E-21 138.7 14.1 70 241-310 291-367 (388)
44 PLN02652 hydrolase; alpha/beta 99.7 1.9E-16 4.1E-21 136.4 14.2 70 241-310 317-389 (395)
45 COG2021 MET2 Homoserine acetyl 99.7 1.3E-15 2.9E-20 124.4 16.7 232 32-307 120-367 (368)
46 KOG1455 Lysophospholipase [Lip 99.7 3.4E-16 7.3E-21 124.1 12.7 194 41-308 106-312 (313)
47 COG1647 Esterase/lipase [Gener 99.6 1.3E-14 2.8E-19 109.6 13.5 68 239-306 172-242 (243)
48 COG2267 PldB Lysophospholipase 99.6 1.5E-14 3.3E-19 119.9 15.4 69 242-310 222-296 (298)
49 PRK10985 putative hydrolase; P 99.6 1.2E-14 2.6E-19 123.1 14.1 69 241-309 248-321 (324)
50 TIGR01838 PHA_synth_I poly(R)- 99.6 2.7E-14 5.8E-19 126.0 14.6 57 239-295 406-462 (532)
51 TIGR01836 PHA_synth_III_C poly 99.6 1.9E-14 4.1E-19 123.3 13.0 65 242-307 280-349 (350)
52 PRK05855 short chain dehydroge 99.6 1.3E-14 2.9E-19 133.2 12.3 66 244-310 229-294 (582)
53 PF03096 Ndr: Ndr family; Int 99.6 2E-13 4.4E-18 109.1 17.0 203 32-308 73-279 (283)
54 TIGR01607 PST-A Plasmodium sub 99.6 5.7E-14 1.2E-18 119.1 14.8 64 243-306 263-331 (332)
55 PRK05077 frsA fermentation/res 99.6 8.6E-14 1.9E-18 120.9 15.4 61 245-308 352-412 (414)
56 PLN02872 triacylglycerol lipas 99.6 2E-13 4.3E-18 117.3 17.0 68 243-310 318-391 (395)
57 TIGR03100 hydr1_PEP hydrolase, 99.6 1.2E-13 2.7E-18 114.1 14.9 67 239-306 198-273 (274)
58 PRK11071 esterase YqiA; Provis 99.6 9.5E-14 2.1E-18 107.9 13.1 55 247-306 135-189 (190)
59 KOG2931 Differentiation-relate 99.5 8.2E-13 1.8E-17 104.1 15.1 204 33-309 97-307 (326)
60 PF00326 Peptidase_S9: Prolyl 99.5 3.2E-13 6.9E-18 107.6 13.1 64 247-310 143-211 (213)
61 PRK07868 acyl-CoA synthetase; 99.5 3.9E-13 8.4E-18 129.7 15.4 69 243-311 292-364 (994)
62 COG3208 GrsT Predicted thioest 99.4 5.3E-13 1.1E-17 103.3 9.4 63 245-308 173-236 (244)
63 COG0596 MhpC Predicted hydrola 99.4 3.2E-12 7E-17 104.7 13.8 66 241-306 214-280 (282)
64 PRK13604 luxD acyl transferase 99.4 8.1E-12 1.8E-16 102.1 13.4 50 242-291 196-247 (307)
65 KOG2564 Predicted acetyltransf 99.3 4.9E-12 1.1E-16 99.1 8.5 74 18-92 103-181 (343)
66 PRK10566 esterase; Provisional 99.3 4.8E-11 1E-15 97.5 14.2 62 243-308 180-248 (249)
67 PF12695 Abhydrolase_5: Alpha/ 99.3 1.2E-11 2.6E-16 92.2 9.4 44 245-288 101-145 (145)
68 PRK11460 putative hydrolase; P 99.3 1.9E-11 4.1E-16 98.3 11.2 58 248-305 148-209 (232)
69 TIGR01849 PHB_depoly_PhaZ poly 99.3 9.7E-11 2.1E-15 99.8 15.3 68 241-308 330-406 (406)
70 KOG1552 Predicted alpha/beta h 99.3 2.4E-11 5.2E-16 94.9 10.6 68 242-310 186-254 (258)
71 PLN02442 S-formylglutathione h 99.3 3.9E-11 8.5E-16 99.5 12.2 48 46-93 131-178 (283)
72 KOG4667 Predicted esterase [Li 99.2 2E-10 4.4E-15 86.6 11.4 60 247-307 198-257 (269)
73 PF02230 Abhydrolase_2: Phosph 99.2 2.4E-10 5.2E-15 91.1 10.4 57 248-308 155-215 (216)
74 TIGR01839 PHA_synth_II poly(R) 99.2 7.3E-10 1.6E-14 97.3 13.1 68 28-95 254-330 (560)
75 KOG4391 Predicted alpha/beta h 99.1 1.5E-10 3.3E-15 87.4 7.5 68 242-310 215-284 (300)
76 PF08538 DUF1749: Protein of u 99.1 6.2E-10 1.3E-14 90.2 10.3 68 239-306 223-303 (303)
77 TIGR02821 fghA_ester_D S-formy 99.1 3.7E-09 8E-14 87.5 14.5 49 45-93 122-173 (275)
78 PF06821 Ser_hydrolase: Serine 99.1 1.5E-10 3.3E-15 87.7 5.7 46 247-293 113-158 (171)
79 PF08840 BAAT_C: BAAT / Acyl-C 99.1 4.4E-10 9.5E-15 88.9 7.4 50 44-94 5-57 (213)
80 PF01738 DLH: Dienelactone hyd 99.0 2.4E-09 5.3E-14 85.5 11.2 66 243-308 140-217 (218)
81 COG1506 DAP2 Dipeptidyl aminop 99.0 2.5E-09 5.4E-14 98.2 11.9 69 242-310 545-618 (620)
82 COG0400 Predicted esterase [Ge 99.0 2.2E-09 4.7E-14 83.4 9.7 54 41-94 80-135 (207)
83 PF05728 UPF0227: Uncharacteri 99.0 1.2E-08 2.7E-13 78.2 13.0 51 41-94 42-92 (187)
84 PF06342 DUF1057: Alpha/beta h 99.0 1.7E-08 3.8E-13 80.2 13.5 56 41-98 86-142 (297)
85 COG0429 Predicted hydrolase of 98.9 6E-09 1.3E-13 84.6 9.3 67 242-308 268-340 (345)
86 COG3243 PhaC Poly(3-hydroxyalk 98.9 1E-08 2.2E-13 85.7 10.5 51 44-94 167-218 (445)
87 COG3545 Predicted esterase of 98.8 6.8E-08 1.5E-12 71.1 10.3 61 246-307 115-178 (181)
88 KOG1838 Alpha/beta hydrolase [ 98.8 1.7E-07 3.7E-12 79.0 14.0 68 241-308 315-388 (409)
89 PF00975 Thioesterase: Thioest 98.8 2.3E-07 4.9E-12 74.8 13.9 56 38-93 45-104 (229)
90 PF09752 DUF2048: Uncharacteri 98.8 1.4E-07 3.1E-12 77.8 12.5 57 249-306 290-347 (348)
91 COG3571 Predicted hydrolase of 98.8 1.2E-07 2.6E-12 68.5 10.2 54 43-96 74-127 (213)
92 PF10230 DUF2305: Uncharacteri 98.7 1E-06 2.2E-11 72.3 16.4 59 36-94 56-123 (266)
93 COG2945 Predicted hydrolase of 98.7 1.7E-07 3.7E-12 70.0 9.1 60 245-306 146-205 (210)
94 KOG2624 Triglyceride lipase-ch 98.7 6.8E-07 1.5E-11 76.4 14.0 68 242-309 326-399 (403)
95 COG0412 Dienelactone hydrolase 98.7 5.7E-07 1.2E-11 72.2 12.8 65 245-309 155-234 (236)
96 PF05448 AXE1: Acetyl xylan es 98.7 3.1E-07 6.7E-12 77.0 11.1 67 239-308 253-320 (320)
97 PTZ00472 serine carboxypeptida 98.7 1.6E-06 3.4E-11 76.7 15.8 61 247-307 363-458 (462)
98 PF06500 DUF1100: Alpha/beta h 98.6 8.1E-07 1.7E-11 75.6 13.3 61 245-308 349-409 (411)
99 TIGR01840 esterase_phb esteras 98.6 2.9E-07 6.3E-12 73.2 9.2 36 58-93 95-130 (212)
100 KOG2551 Phospholipase/carboxyh 98.6 8.1E-07 1.8E-11 68.1 10.9 62 245-309 160-221 (230)
101 PLN00021 chlorophyllase 98.6 7.3E-07 1.6E-11 74.7 11.8 37 56-92 124-165 (313)
102 PRK10162 acetyl esterase; Prov 98.6 1.5E-06 3.2E-11 73.5 13.3 62 248-309 248-316 (318)
103 KOG3043 Predicted hydrolase re 98.5 3.6E-07 7.9E-12 70.0 7.1 67 242-308 158-240 (242)
104 PF03959 FSH1: Serine hydrolas 98.5 5.5E-07 1.2E-11 71.4 7.1 49 245-294 158-207 (212)
105 PF06028 DUF915: Alpha/beta hy 98.5 1.4E-06 3E-11 70.3 9.3 57 248-305 184-252 (255)
106 TIGR03230 lipo_lipase lipoprot 98.4 3.6E-07 7.7E-12 79.2 6.0 53 42-94 97-155 (442)
107 TIGR03101 hydr2_PEP hydrolase, 98.4 4E-07 8.6E-12 74.2 5.7 55 40-94 78-135 (266)
108 KOG2565 Predicted hydrolases o 98.4 5.1E-06 1.1E-10 68.5 11.3 58 39-96 210-267 (469)
109 PF06057 VirJ: Bacterial virul 98.4 5.3E-06 1.1E-10 62.7 9.8 53 40-92 46-106 (192)
110 cd00707 Pancreat_lipase_like P 98.4 5.7E-07 1.2E-11 74.2 5.1 51 44-94 92-148 (275)
111 PF11339 DUF3141: Protein of u 98.3 2.8E-05 6E-10 67.3 14.9 60 36-95 113-177 (581)
112 PF07859 Abhydrolase_3: alpha/ 98.3 2.6E-06 5.7E-11 67.6 8.2 57 37-93 41-110 (211)
113 PRK05371 x-prolyl-dipeptidyl a 98.3 2.3E-05 4.9E-10 73.7 15.0 71 239-310 446-521 (767)
114 PRK10115 protease 2; Provision 98.3 6.9E-06 1.5E-10 76.4 10.8 53 41-94 505-560 (686)
115 KOG1551 Uncharacterized conser 98.3 1.4E-05 3E-10 62.9 10.3 59 251-310 309-368 (371)
116 PF10142 PhoPQ_related: PhoPQ- 98.2 2E-05 4.3E-10 66.7 11.9 66 242-310 256-322 (367)
117 PF08386 Abhydrolase_4: TAP-li 98.2 5E-06 1.1E-10 57.5 6.8 61 248-308 34-94 (103)
118 COG4757 Predicted alpha/beta h 98.2 5.8E-06 1.2E-10 63.8 7.2 66 240-305 208-280 (281)
119 PF10503 Esterase_phd: Esteras 98.2 1.2E-05 2.7E-10 63.3 8.9 47 48-94 85-133 (220)
120 PF07819 PGAP1: PGAP1-like pro 98.2 8.7E-06 1.9E-10 64.9 7.7 53 44-96 66-126 (225)
121 PRK04940 hypothetical protein; 98.2 0.00015 3.2E-09 54.8 13.7 57 36-95 34-94 (180)
122 PRK10252 entF enterobactin syn 98.1 2.5E-05 5.5E-10 78.9 12.5 55 38-92 1112-1170(1296)
123 COG3458 Acetyl esterase (deace 98.1 3.9E-05 8.5E-10 60.8 10.4 67 239-308 250-317 (321)
124 PLN02733 phosphatidylcholine-s 98.1 5E-06 1.1E-10 72.6 5.3 51 44-94 148-202 (440)
125 KOG2100 Dipeptidyl aminopeptid 98.1 5E-05 1.1E-09 71.2 11.9 69 242-310 675-749 (755)
126 KOG3253 Predicted alpha/beta h 98.0 1.7E-05 3.6E-10 69.5 7.6 66 242-307 298-373 (784)
127 KOG4627 Kynurenine formamidase 98.0 1.3E-05 2.9E-10 60.6 5.0 52 242-293 201-252 (270)
128 KOG2281 Dipeptidyl aminopeptid 98.0 9E-05 1.9E-09 65.6 10.6 61 32-92 698-761 (867)
129 COG4099 Predicted peptidase [G 97.9 3.3E-05 7.1E-10 62.0 6.4 83 9-92 214-303 (387)
130 PF00450 Peptidase_S10: Serine 97.9 0.00081 1.7E-08 59.4 15.3 60 247-306 329-414 (415)
131 PF03583 LIP: Secretory lipase 97.9 0.00069 1.5E-08 56.4 13.9 62 246-310 217-283 (290)
132 PF03403 PAF-AH_p_II: Platelet 97.9 3.6E-05 7.7E-10 66.4 6.3 36 56-92 226-261 (379)
133 smart00824 PKS_TE Thioesterase 97.8 0.00039 8.5E-09 54.8 11.4 52 41-92 46-101 (212)
134 TIGR00976 /NonD putative hydro 97.8 0.00017 3.8E-09 65.9 10.4 52 42-93 76-132 (550)
135 KOG1515 Arylacetamide deacetyl 97.8 0.00069 1.5E-08 57.0 12.6 56 41-96 143-210 (336)
136 KOG3975 Uncharacterized conser 97.8 0.00028 6E-09 55.4 9.2 61 244-305 238-300 (301)
137 PRK10439 enterobactin/ferric e 97.7 0.00032 6.9E-09 61.3 10.4 49 44-92 269-322 (411)
138 KOG4840 Predicted hydrolases o 97.7 0.0004 8.7E-09 53.5 9.2 55 40-94 85-145 (299)
139 PF02129 Peptidase_S15: X-Pro 97.7 0.0011 2.3E-08 54.9 12.2 51 43-93 81-136 (272)
140 COG0657 Aes Esterase/lipase [L 97.5 0.0019 4.1E-08 54.7 11.5 38 57-94 151-192 (312)
141 PF00756 Esterase: Putative es 97.5 0.00018 3.8E-09 58.8 5.0 51 43-93 97-150 (251)
142 KOG2112 Lysophospholipase [Lip 97.4 0.00095 2.1E-08 51.2 8.1 50 43-92 73-127 (206)
143 PF07224 Chlorophyllase: Chlor 97.4 0.0014 3.1E-08 52.0 9.0 38 57-94 119-158 (307)
144 PF05705 DUF829: Eukaryotic pr 97.4 0.0055 1.2E-07 49.7 12.8 60 246-305 176-240 (240)
145 PF02273 Acyl_transf_2: Acyl t 97.4 0.0045 9.7E-08 48.8 11.4 50 241-290 188-239 (294)
146 cd00741 Lipase Lipase. Lipase 97.4 0.00038 8.2E-09 52.1 5.3 37 56-92 26-66 (153)
147 PF02450 LCAT: Lecithin:choles 97.3 0.00048 1.1E-08 59.9 5.5 52 43-94 101-161 (389)
148 PF04301 DUF452: Protein of un 97.3 0.0027 5.8E-08 49.7 8.8 38 56-95 55-92 (213)
149 PF01764 Lipase_3: Lipase (cla 97.2 0.00086 1.9E-08 49.3 5.3 37 43-79 49-85 (140)
150 PF00151 Lipase: Lipase; Inte 97.2 0.00078 1.7E-08 57.0 5.5 38 57-94 149-188 (331)
151 PF12048 DUF3530: Protein of u 97.1 0.01 2.3E-07 49.9 11.7 44 49-92 184-228 (310)
152 COG3319 Thioesterase domains o 97.1 0.0013 2.8E-08 53.2 5.9 58 37-94 43-104 (257)
153 PLN02606 palmitoyl-protein thi 97.1 0.055 1.2E-06 44.6 14.8 47 46-92 78-131 (306)
154 PF11187 DUF2974: Protein of u 97.0 0.0017 3.6E-08 51.7 5.2 49 48-97 75-127 (224)
155 PLN02633 palmitoyl protein thi 96.9 0.014 3E-07 48.1 10.4 47 46-92 77-130 (314)
156 PF05990 DUF900: Alpha/beta hy 96.9 0.002 4.3E-08 51.8 5.4 50 45-94 76-138 (233)
157 KOG3847 Phospholipase A2 (plat 96.8 0.0039 8.4E-08 50.8 6.1 44 47-91 230-273 (399)
158 COG1075 LipA Predicted acetylt 96.8 0.0019 4E-08 55.1 4.5 52 41-92 110-163 (336)
159 COG2819 Predicted hydrolase of 96.7 0.0019 4.1E-08 51.8 4.0 48 46-93 122-172 (264)
160 PF12715 Abhydrolase_7: Abhydr 96.7 0.0014 2.9E-08 55.5 3.3 34 58-92 226-259 (390)
161 PF01674 Lipase_2: Lipase (cla 96.7 0.004 8.6E-08 49.2 5.5 34 44-78 62-95 (219)
162 COG4188 Predicted dienelactone 96.6 0.00094 2E-08 56.0 1.6 56 242-297 245-303 (365)
163 cd00519 Lipase_3 Lipase (class 96.5 0.0044 9.5E-08 49.9 4.7 38 56-93 126-168 (229)
164 PF05057 DUF676: Putative seri 96.4 0.0039 8.5E-08 49.6 4.0 35 43-77 61-97 (217)
165 COG1073 Hydrolases of the alph 96.4 0.011 2.3E-07 49.3 6.8 68 241-308 224-297 (299)
166 COG0627 Predicted esterase [Ge 96.4 0.0042 9E-08 52.0 3.9 38 59-96 153-190 (316)
167 COG4814 Uncharacterized protei 96.3 0.0056 1.2E-07 48.4 4.2 52 43-94 117-177 (288)
168 PF12740 Chlorophyllase2: Chlo 96.3 0.0044 9.5E-08 50.0 3.6 37 57-93 90-131 (259)
169 PF06259 Abhydrolase_8: Alpha/ 96.2 0.01 2.2E-07 45.2 5.0 53 43-95 89-146 (177)
170 PLN00413 triacylglycerol lipas 96.2 0.011 2.4E-07 51.6 5.5 35 43-77 269-303 (479)
171 PLN02162 triacylglycerol lipas 96.1 0.012 2.6E-07 51.2 5.3 33 45-77 265-297 (475)
172 KOG3724 Negative regulator of 96.1 0.011 2.4E-07 54.3 5.2 38 59-96 183-223 (973)
173 KOG1553 Predicted alpha/beta h 96.0 0.014 3E-07 48.4 5.1 40 52-92 303-344 (517)
174 PLN02517 phosphatidylcholine-s 96.0 0.01 2.3E-07 53.1 4.6 53 43-95 194-265 (642)
175 COG4782 Uncharacterized protei 95.9 0.015 3.2E-07 48.7 5.0 48 46-93 175-234 (377)
176 KOG3101 Esterase D [General fu 95.9 0.008 1.7E-07 46.2 3.2 37 58-94 141-177 (283)
177 COG1770 PtrB Protease II [Amin 95.8 0.09 2E-06 47.7 9.8 54 41-94 508-563 (682)
178 COG3509 LpqC Poly(3-hydroxybut 95.8 0.019 4E-07 46.8 4.8 51 43-93 123-179 (312)
179 COG3150 Predicted esterase [Ge 95.7 0.021 4.5E-07 42.3 4.4 54 38-94 39-92 (191)
180 PLN02571 triacylglycerol lipas 95.7 0.013 2.8E-07 50.6 3.9 36 43-78 209-246 (413)
181 TIGR03502 lipase_Pla1_cef extr 95.7 0.019 4.1E-07 53.9 5.4 39 40-78 521-575 (792)
182 KOG2369 Lecithin:cholesterol a 95.7 0.0099 2.1E-07 51.5 3.1 52 43-94 163-226 (473)
183 PLN02454 triacylglycerol lipas 95.6 0.015 3.3E-07 50.1 4.1 31 48-78 216-248 (414)
184 COG4553 DepA Poly-beta-hydroxy 95.5 0.61 1.3E-05 38.2 12.3 59 37-96 149-212 (415)
185 PF05577 Peptidase_S28: Serine 95.5 0.032 6.9E-07 49.6 5.9 57 38-94 86-149 (434)
186 PF11288 DUF3089: Protein of u 95.2 0.027 5.8E-07 43.9 4.0 39 41-79 77-116 (207)
187 PF01083 Cutinase: Cutinase; 95.2 0.056 1.2E-06 41.5 5.6 48 47-94 70-123 (179)
188 PLN02213 sinapoylglucose-malat 95.1 0.075 1.6E-06 45.1 6.6 59 248-307 233-316 (319)
189 PLN02408 phospholipase A1 95.1 0.027 5.9E-07 47.9 3.9 34 46-79 186-221 (365)
190 PLN02934 triacylglycerol lipas 95.0 0.031 6.7E-07 49.3 4.0 35 43-77 306-340 (515)
191 PF10340 DUF2424: Protein of u 95.0 0.25 5.4E-06 42.3 9.3 52 43-94 180-236 (374)
192 PF05277 DUF726: Protein of un 94.9 0.043 9.3E-07 46.5 4.5 40 55-94 217-261 (345)
193 PF11144 DUF2920: Protein of u 94.7 0.044 9.5E-07 47.0 4.3 50 43-92 165-218 (403)
194 PLN02310 triacylglycerol lipas 94.6 0.069 1.5E-06 46.1 5.2 35 44-78 191-229 (405)
195 PLN02209 serine carboxypeptida 94.6 0.13 2.9E-06 45.4 7.0 59 248-307 351-434 (437)
196 KOG1282 Serine carboxypeptidas 94.5 0.11 2.4E-06 45.7 6.4 61 248-308 363-448 (454)
197 PLN02324 triacylglycerol lipas 94.5 0.046 9.9E-07 47.2 3.8 34 45-78 200-235 (415)
198 KOG2183 Prolylcarboxypeptidase 94.4 0.036 7.8E-07 47.2 3.0 53 41-93 144-202 (492)
199 PLN02802 triacylglycerol lipas 94.4 0.051 1.1E-06 48.0 4.0 35 45-79 315-351 (509)
200 COG2382 Fes Enterochelin ester 94.2 0.041 8.8E-07 45.1 2.8 39 58-96 177-215 (299)
201 PLN03016 sinapoylglucose-malat 94.2 0.19 4E-06 44.5 7.1 59 248-307 347-430 (433)
202 PLN02753 triacylglycerol lipas 94.1 0.062 1.4E-06 47.7 4.0 33 46-78 295-332 (531)
203 PF06850 PHB_depo_C: PHB de-po 94.0 0.13 2.9E-06 39.3 5.0 61 248-308 134-202 (202)
204 COG4287 PqaA PhoPQ-activated p 93.9 0.32 6.9E-06 41.1 7.3 62 245-309 326-388 (507)
205 PF05677 DUF818: Chlamydia CHL 93.7 0.11 2.5E-06 43.4 4.5 40 40-79 190-236 (365)
206 PLN02719 triacylglycerol lipas 93.7 0.086 1.9E-06 46.7 4.0 20 59-78 299-318 (518)
207 PLN03037 lipase class 3 family 93.7 0.086 1.9E-06 46.7 4.0 35 44-78 300-338 (525)
208 PLN02761 lipase class 3 family 93.5 0.096 2.1E-06 46.5 4.0 34 45-78 275-314 (527)
209 KOG3967 Uncharacterized conser 93.4 0.15 3.2E-06 39.5 4.4 46 52-97 184-231 (297)
210 COG2936 Predicted acyl esteras 93.2 0.97 2.1E-05 41.0 9.8 49 46-94 110-160 (563)
211 KOG4569 Predicted lipase [Lipi 92.9 0.14 2.9E-06 43.8 4.0 37 42-78 155-191 (336)
212 PLN02847 triacylglycerol lipas 92.9 0.13 2.9E-06 46.3 4.0 24 55-78 248-271 (633)
213 KOG2237 Predicted serine prote 92.6 0.73 1.6E-05 42.0 8.1 53 41-93 530-584 (712)
214 PF02089 Palm_thioest: Palmito 92.0 0.63 1.4E-05 38.2 6.5 35 58-92 80-115 (279)
215 KOG1202 Animal-type fatty acid 90.4 11 0.00023 37.8 13.5 56 37-92 2160-2218(2376)
216 cd00312 Esterase_lipase Estera 90.2 0.3 6.6E-06 44.3 3.5 43 52-94 168-214 (493)
217 KOG2182 Hydrolytic enzymes of 89.1 2.5 5.5E-05 37.5 7.9 54 41-94 148-208 (514)
218 PF07082 DUF1350: Protein of u 88.9 0.41 8.9E-06 38.3 2.9 33 59-91 91-123 (250)
219 KOG2385 Uncharacterized conser 88.4 0.4 8.6E-06 42.3 2.7 40 55-94 444-488 (633)
220 COG4947 Uncharacterized protei 88.4 0.26 5.6E-06 36.8 1.4 37 58-94 101-137 (227)
221 PF07519 Tannase: Tannase and 86.7 0.92 2E-05 40.8 4.1 63 248-310 353-429 (474)
222 COG5153 CVT17 Putative lipase 85.3 1.4 3E-05 36.0 4.0 35 55-91 273-307 (425)
223 KOG4540 Putative lipase essent 85.3 1.4 3E-05 36.0 4.0 35 55-91 273-307 (425)
224 PF00135 COesterase: Carboxyle 84.8 1.8 3.9E-05 39.6 5.2 59 38-96 183-248 (535)
225 KOG2541 Palmitoyl protein thio 84.0 9.1 0.0002 31.2 7.9 47 46-92 75-127 (296)
226 KOG2029 Uncharacterized conser 82.8 2.3 5E-05 38.6 4.6 35 58-92 526-571 (697)
227 COG3946 VirJ Type IV secretory 82.8 1.4 3.1E-05 37.9 3.3 50 41-90 305-362 (456)
228 COG2272 PnbA Carboxylesterase 80.2 1.3 2.9E-05 39.1 2.4 56 39-94 156-218 (491)
229 COG1505 Serine proteases of th 79.8 6.3 0.00014 36.0 6.3 51 42-92 478-534 (648)
230 PF00698 Acyl_transf_1: Acyl t 79.1 1.6 3.4E-05 37.1 2.5 31 48-78 74-104 (318)
231 smart00827 PKS_AT Acyl transfe 78.6 2.6 5.5E-05 35.4 3.6 31 48-78 72-102 (298)
232 PF08237 PE-PPE: PE-PPE domain 78.3 3.1 6.7E-05 33.3 3.7 22 58-79 48-69 (225)
233 KOG4372 Predicted alpha/beta h 78.1 0.92 2E-05 39.0 0.7 37 41-77 133-169 (405)
234 TIGR03131 malonate_mdcH malona 77.4 2.9 6.2E-05 35.0 3.5 32 48-79 66-97 (295)
235 PF05576 Peptidase_S37: PS-10 75.5 11 0.00023 33.0 6.2 56 37-92 110-168 (448)
236 TIGR00128 fabD malonyl CoA-acy 74.7 3.5 7.6E-05 34.4 3.3 32 48-79 72-104 (290)
237 PRK10279 hypothetical protein; 74.3 3 6.5E-05 35.0 2.8 34 48-81 23-56 (300)
238 cd07225 Pat_PNPLA6_PNPLA7 Pata 72.7 5.3 0.00012 33.7 3.9 32 48-79 33-64 (306)
239 cd07198 Patatin Patatin-like p 72.1 5.6 0.00012 30.2 3.6 33 48-80 16-48 (172)
240 PF09949 DUF2183: Uncharacteri 69.7 15 0.00032 25.1 4.8 43 46-88 53-97 (100)
241 cd07227 Pat_Fungal_NTE1 Fungal 67.7 8.2 0.00018 31.9 3.9 32 48-79 28-59 (269)
242 PF03283 PAE: Pectinacetyleste 67.7 21 0.00045 31.0 6.5 37 58-94 156-196 (361)
243 COG1752 RssA Predicted esteras 67.5 7.3 0.00016 32.9 3.7 33 48-80 29-61 (306)
244 cd07207 Pat_ExoU_VipD_like Exo 67.2 8.6 0.00019 29.8 3.9 30 50-79 19-48 (194)
245 cd07210 Pat_hypo_W_succinogene 66.8 9.5 0.00021 30.4 4.0 29 51-79 21-49 (221)
246 PF07519 Tannase: Tannase and 65.8 15 0.00033 33.2 5.5 48 49-96 103-153 (474)
247 TIGR02816 pfaB_fam PfaB family 63.6 8.1 0.00018 35.4 3.4 31 49-79 255-286 (538)
248 cd07228 Pat_NTE_like_bacteria 62.0 14 0.00029 28.2 4.0 32 50-81 20-51 (175)
249 cd07230 Pat_TGL4-5_like Triacy 60.8 7.3 0.00016 34.5 2.5 33 54-86 97-129 (421)
250 cd07209 Pat_hypo_Ecoli_Z1214_l 59.2 14 0.00031 29.2 3.8 32 49-80 17-48 (215)
251 cd07231 Pat_SDP1-like Sugar-De 58.3 9 0.0002 32.3 2.5 38 48-86 87-124 (323)
252 cd07229 Pat_TGL3_like Triacylg 57.2 9.6 0.00021 33.3 2.6 40 49-88 102-141 (391)
253 cd07232 Pat_PLPL Patain-like p 57.1 9.3 0.0002 33.7 2.6 41 46-87 84-124 (407)
254 cd07205 Pat_PNPLA6_PNPLA7_NTE1 54.6 23 0.00051 26.9 4.2 30 50-79 20-49 (175)
255 KOG2521 Uncharacterized conser 53.1 44 0.00095 28.8 5.8 65 247-311 224-293 (350)
256 KOG1516 Carboxylesterase and r 52.5 18 0.00039 33.4 3.8 60 38-97 170-236 (545)
257 cd01714 ETF_beta The electron 50.3 23 0.00051 27.8 3.6 52 37-89 89-145 (202)
258 cd07208 Pat_hypo_Ecoli_yjju_li 49.4 26 0.00057 28.8 4.0 32 51-82 19-51 (266)
259 cd07224 Pat_like Patatin-like 48.0 29 0.00062 28.0 3.9 32 49-80 18-51 (233)
260 cd07212 Pat_PNPLA9 Patatin-lik 47.9 27 0.00058 29.6 3.8 32 48-79 18-53 (312)
261 PLN02209 serine carboxypeptida 44.0 27 0.00058 31.3 3.4 51 44-94 146-213 (437)
262 COG2939 Carboxypeptidase C (ca 42.8 25 0.00054 31.6 2.9 40 58-97 198-240 (498)
263 KOG1578 Predicted carbonic anh 42.7 24 0.00052 28.8 2.6 49 29-77 122-173 (276)
264 cd07206 Pat_TGL3-4-5_SDP1 Tria 42.5 34 0.00074 28.7 3.6 37 46-83 86-122 (298)
265 cd07204 Pat_PNPLA_like Patatin 41.7 43 0.00094 27.2 4.0 20 61-80 34-53 (243)
266 cd08769 DAP_dppA_2 Peptidase M 41.3 1.3E+02 0.0028 24.9 6.7 59 244-308 143-203 (270)
267 PF10605 3HBOH: 3HB-oligomer h 40.7 33 0.00072 31.7 3.4 38 60-97 287-325 (690)
268 PF10081 Abhydrolase_9: Alpha/ 40.2 37 0.0008 28.1 3.3 55 43-97 91-151 (289)
269 PLN03016 sinapoylglucose-malat 39.6 34 0.00074 30.6 3.4 48 46-93 146-210 (433)
270 PF05576 Peptidase_S37: PS-10 39.4 6.8 0.00015 34.1 -0.9 61 244-306 347-412 (448)
271 COG2939 Carboxypeptidase C (ca 39.3 41 0.00088 30.3 3.7 31 277-308 461-491 (498)
272 PLN02213 sinapoylglucose-malat 39.0 53 0.0012 27.9 4.3 49 45-93 31-96 (319)
273 PF14253 AbiH: Bacteriophage a 36.9 21 0.00045 29.4 1.6 21 50-70 226-247 (270)
274 cd07222 Pat_PNPLA4 Patatin-lik 36.7 37 0.00081 27.6 3.0 22 61-83 34-55 (246)
275 cd07218 Pat_iPLA2 Calcium-inde 35.4 59 0.0013 26.5 3.9 20 61-80 33-52 (245)
276 cd01819 Patatin_and_cPLA2 Pata 35.2 63 0.0014 24.0 3.8 19 58-76 28-46 (155)
277 COG0331 FabD (acyl-carrier-pro 34.9 40 0.00088 28.5 2.9 22 56-77 83-104 (310)
278 cd07221 Pat_PNPLA3 Patatin-lik 33.7 67 0.0015 26.3 4.0 34 46-80 17-54 (252)
279 cd00883 beta_CA_cladeA Carboni 33.2 59 0.0013 25.0 3.4 33 44-76 67-99 (182)
280 cd00382 beta_CA Carbonic anhyd 32.9 49 0.0011 23.4 2.7 30 44-73 45-74 (119)
281 PRK15219 carbonic anhydrase; P 32.5 44 0.00096 27.2 2.7 34 44-77 129-162 (245)
282 cd07220 Pat_PNPLA2 Patatin-lik 32.2 69 0.0015 26.1 3.8 34 46-80 21-58 (249)
283 COG4667 Predicted esterase of 31.4 49 0.0011 27.2 2.7 42 46-88 28-70 (292)
284 PLN02752 [acyl-carrier protein 30.9 48 0.001 28.5 2.8 29 50-78 110-144 (343)
285 COG2830 Uncharacterized protei 30.7 36 0.00077 25.5 1.7 35 58-94 57-91 (214)
286 KOG1283 Serine carboxypeptidas 30.5 43 0.00094 28.3 2.3 53 41-93 98-166 (414)
287 PLN03006 carbonate dehydratase 29.6 69 0.0015 26.9 3.3 31 45-75 159-189 (301)
288 KOG1907 Phosphoribosylformylgl 29.5 50 0.0011 32.2 2.7 56 24-79 859-916 (1320)
289 TIGR03607 patatin-related prot 29.5 68 0.0015 30.9 3.7 37 41-77 46-85 (739)
290 TIGR02813 omega_3_PfaA polyket 28.4 54 0.0012 36.6 3.2 31 48-78 664-694 (2582)
291 PF12242 Eno-Rase_NADH_b: NAD( 28.3 1.6E+02 0.0035 19.0 4.0 38 43-80 21-62 (78)
292 COG0288 CynT Carbonic anhydras 28.0 57 0.0012 25.8 2.6 35 43-77 77-111 (207)
293 PF12641 Flavodoxin_3: Flavodo 27.8 2.2E+02 0.0048 21.4 5.5 59 249-307 40-98 (160)
294 PF00484 Pro_CA: Carbonic anhy 27.5 1.1E+02 0.0024 22.5 4.0 34 43-76 40-73 (153)
295 PLN00416 carbonate dehydratase 26.6 89 0.0019 25.7 3.5 32 45-76 127-158 (258)
296 cd01014 nicotinamidase_related 26.2 1.7E+02 0.0036 21.7 4.7 48 46-93 88-135 (155)
297 PRK10437 carbonic anhydrase; P 25.4 62 0.0014 25.8 2.3 32 45-76 78-109 (220)
298 COG3887 Predicted signaling pr 25.3 1.4E+02 0.0029 27.9 4.6 40 57-97 337-382 (655)
299 COG1582 FlgEa Uncharacterized 24.4 1.6E+02 0.0035 18.1 3.3 45 263-309 15-59 (67)
300 cd03379 beta_CA_cladeD Carboni 24.4 88 0.0019 22.9 2.9 31 43-73 41-71 (142)
301 cd07217 Pat17_PNPLA8_PNPLA9_li 24.3 65 0.0014 27.8 2.5 17 62-78 45-61 (344)
302 COG4850 Uncharacterized conser 24.2 2.1E+02 0.0045 24.5 5.1 47 46-92 266-314 (373)
303 PLN03019 carbonic anhydrase 23.9 1E+02 0.0022 26.3 3.4 32 45-76 202-233 (330)
304 cd01311 PDC_hydrolase 2-pyrone 23.8 1.2E+02 0.0026 24.8 3.9 49 43-92 28-79 (263)
305 cd07213 Pat17_PNPLA8_PNPLA9_li 23.5 68 0.0015 26.8 2.4 19 61-79 37-55 (288)
306 cd00884 beta_CA_cladeB Carboni 23.5 1.1E+02 0.0024 23.8 3.4 33 44-76 73-105 (190)
307 PRK14194 bifunctional 5,10-met 23.3 1.2E+02 0.0026 25.7 3.7 34 45-78 143-182 (301)
308 cd01012 YcaC_related YcaC rela 23.2 2.6E+02 0.0055 20.7 5.3 49 46-94 77-125 (157)
309 KOG1282 Serine carboxypeptidas 23.0 95 0.0021 28.0 3.2 55 41-95 144-215 (454)
310 PF09994 DUF2235: Uncharacteri 22.9 80 0.0017 26.2 2.7 26 53-78 86-112 (277)
311 PF08484 Methyltransf_14: C-me 22.7 1.7E+02 0.0037 22.0 4.2 48 44-91 53-102 (160)
312 PF10561 UPF0565: Uncharacteri 22.7 97 0.0021 26.1 3.0 37 58-94 193-245 (303)
313 PLN02347 GMP synthetase 22.3 2.3E+02 0.0049 26.4 5.6 64 30-93 200-267 (536)
314 PLN02154 carbonic anhydrase 22.2 1.2E+02 0.0025 25.5 3.4 32 45-76 153-184 (290)
315 PF05577 Peptidase_S28: Serine 21.6 84 0.0018 28.1 2.8 38 249-289 377-414 (434)
316 PF13709 DUF4159: Domain of un 21.4 2.6E+02 0.0056 22.1 5.1 38 248-285 53-90 (207)
317 cd07211 Pat_PNPLA8 Patatin-lik 21.3 72 0.0016 27.0 2.2 33 45-77 24-60 (308)
318 PLN03014 carbonic anhydrase 21.3 1.2E+02 0.0026 26.1 3.3 31 45-75 207-237 (347)
319 PF01734 Patatin: Patatin-like 20.9 1.1E+02 0.0025 22.9 3.1 22 57-78 26-47 (204)
320 PF06289 FlbD: Flagellar prote 20.6 1.6E+02 0.0034 18.0 2.8 35 273-308 24-58 (60)
321 cd03131 GATase1_HTS Type 1 glu 20.5 31 0.00068 26.4 -0.2 36 43-78 82-117 (175)
322 cd01015 CSHase N-carbamoylsarc 20.4 2.4E+02 0.0053 21.4 4.8 48 46-93 103-150 (179)
323 PF07643 DUF1598: Protein of u 20.4 2.2E+02 0.0047 18.7 3.6 32 47-78 32-63 (84)
324 cd00281 DAP_dppA Peptidase M55 20.2 3.2E+02 0.007 22.6 5.5 59 244-308 142-202 (265)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.93 E-value=1.1e-24 Score=182.51 Aligned_cols=213 Identities=20% Similarity=0.267 Sum_probs=125.5
Q ss_pred CccchhhhchHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccccceeeeecCCCCcchhhhccCcCCCCCcccccccc
Q 020663 38 SINSFRHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERD 117 (323)
Q Consensus 38 ~~~~~~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (323)
.++.+++++|+.+++++++.++++|+||||||.+++.+|.++|++|+++|++++..........
T Consensus 82 ~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~---------------- 145 (294)
T PLN02824 82 FYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQ---------------- 145 (294)
T ss_pred cCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCccccccccc----------------
Confidence 4677899999999999999999999999999999999999999999999999986321100000
Q ss_pred chhhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhcccchhHHHHHHHhhhhhhhhhcccCc
Q 020663 118 TSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNS 197 (323)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (323)
+....++.......+ ... .....++... ........... ..+.+.
T Consensus 146 ----~~~~~~~~~~~~~~~--------------~~~-~~~~~~~~~~--------~~~~~~~~~~~--------~~~~~~ 190 (294)
T PLN02824 146 ----PWLGRPFIKAFQNLL--------------RET-AVGKAFFKSV--------ATPETVKNILC--------QCYHDD 190 (294)
T ss_pred ----chhhhHHHHHHHHHH--------------hch-hHHHHHHHhh--------cCHHHHHHHHH--------HhccCh
Confidence 000001100000000 000 0000000000 00000000000 001111
Q ss_pred hhhhHHHHhhhcccchhccchhhHHHHHHhhhccccccCCchhHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCc
Q 020663 198 KEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGS 277 (323)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~ 277 (323)
....++....+......... ...+..+.... ........++++++|+++|+|++|..++.+..+.+.+..+++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~---~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~ 263 (294)
T PLN02824 191 SAVTDELVEAILRPGLEPGA----VDVFLDFISYS---GGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAVE 263 (294)
T ss_pred hhccHHHHHHHHhccCCchH----HHHHHHHhccc---cccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCcc
Confidence 11222222222211111111 11111111100 011223567899999999999999999999999988888889
Q ss_pred EEEEcCCCCCCccccChHHHHHHHHHHHHHh
Q 020663 278 TFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 308 (323)
Q Consensus 278 ~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 308 (323)
++++++++||++++|+|+++++.|.+|++++
T Consensus 264 ~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 264 DFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred ceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999763
No 2
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.92 E-value=1.2e-23 Score=180.36 Aligned_cols=70 Identities=24% Similarity=0.411 Sum_probs=61.0
Q ss_pred hHhhhccCCCCEEEEecCCCCCCCchH-----HHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHHHhc
Q 020663 240 LAKRLHEISCPVLIVTGDTDRIVPSWN-----AERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAF 309 (323)
Q Consensus 240 ~~~~l~~i~~Pvl~i~G~~D~~~~~~~-----~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 309 (323)
....+.++++|+++|+|++|.++|++. .+.+.+.+|++++++++++||++++|+|+++++.|.+||++..
T Consensus 284 ~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~~ 358 (360)
T PLN02679 284 PIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQLP 358 (360)
T ss_pred HHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHhcC
Confidence 346678899999999999999998763 3456677899999999999999999999999999999998643
No 3
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.90 E-value=4.1e-23 Score=173.03 Aligned_cols=214 Identities=15% Similarity=0.155 Sum_probs=122.0
Q ss_pred CccchhhhchHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccccceeeeecCCCCcchhhhccCcCCCCCcccccccc
Q 020663 38 SINSFRHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERD 117 (323)
Q Consensus 38 ~~~~~~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (323)
..+..++++|+.+++++++.++++++||||||.+|+.+|.++|++|+++|++++..........
T Consensus 73 ~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~---------------- 136 (295)
T PRK03592 73 DYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDF---------------- 136 (295)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhc----------------
Confidence 3567899999999999999999999999999999999999999999999999985322110000
Q ss_pred chhhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhcccchhHHHHHHHhhhhhhhhhcccCc
Q 020663 118 TSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNS 197 (323)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (323)
. ......+..+. . .......... ...+...... ....
T Consensus 137 ----~---~~~~~~~~~~~--------------~---------------~~~~~~~~~~-~~~~~~~~~~-----~~~~- 173 (295)
T PRK03592 137 ----P---PAVRELFQALR--------------S---------------PGEGEEMVLE-ENVFIERVLP-----GSIL- 173 (295)
T ss_pred ----c---hhHHHHHHHHh--------------C---------------cccccccccc-hhhHHhhccc-----Cccc-
Confidence 0 00000000000 0 0000000000 0000000000 0000
Q ss_pred hhhhHHHHhhhcccchhccchhhHHHHHHhhhcccc----ccCCchhHhhhccCCCCEEEEecCCCCCCCchHH-HHHHh
Q 020663 198 KEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNE----SKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNA-ERLSR 272 (323)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~-~~~~~ 272 (323)
....++....+...+...........++........ .....++...+.++++|+++|+|++|..+++... +.+.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 253 (295)
T PRK03592 174 RPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRS 253 (295)
T ss_pred ccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHH
Confidence 001111112222111111111122222221110000 0000123456788999999999999999955444 44455
Q ss_pred hCCCcEEEEcCCCCCCccccChHHHHHHHHHHHHHhcC
Q 020663 273 AIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAFG 310 (323)
Q Consensus 273 ~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 310 (323)
..+++++++++++||+++.|+|+++++.|.+|+++...
T Consensus 254 ~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 254 WPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred hhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 67899999999999999999999999999999987653
No 4
>PLN02965 Probable pheophorbidase
Probab=99.90 E-value=3.9e-23 Score=169.42 Aligned_cols=67 Identities=7% Similarity=0.087 Sum_probs=62.6
Q ss_pred hhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHHHhc
Q 020663 243 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAF 309 (323)
Q Consensus 243 ~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 309 (323)
.+.++++|+++|+|++|..+|++..+.+.+.+|++++++++++||++++|+|++|++.|.+|++...
T Consensus 188 ~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 188 NPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFSVPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred hhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCCCchhhcCHHHHHHHHHHHHHHhc
Confidence 4557899999999999999999999999999999999999999999999999999999999998753
No 5
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.90 E-value=4.3e-23 Score=172.34 Aligned_cols=250 Identities=21% Similarity=0.277 Sum_probs=139.8
Q ss_pred CCCccccccchhhccccc-cccccccchh-hhhhccCCCccchhhhchHHHHHHHhCCceeEEEEechhhHHHHHHHHhc
Q 020663 2 SSLHWGVNFGTVTNMLGR-SFFFPFHSNW-IIICAICPSINSFRHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEA 79 (323)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 79 (323)
|++||..+...+....|. ....++.+.. ..-....+.++..++++.+..++...+.+++++||||+||.+|+.+|+.+
T Consensus 70 ~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~ 149 (326)
T KOG1454|consen 70 SSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYY 149 (326)
T ss_pred CcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhC
Confidence 577888877777766532 2333444311 12222334477788999999999999999999999999999999999999
Q ss_pred ccccceee---eecCCCCcchhhhccCcCCCCCccccccccchhhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 020663 80 PERVAALI---LIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADM 156 (323)
Q Consensus 80 P~~v~~li---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (323)
|+.|+++| ++++.......... ... .........
T Consensus 150 P~~V~~lv~~~~~~~~~~~~~~~~~--------------------------~~~-----------------~~~~~~~~~ 186 (326)
T KOG1454|consen 150 PETVDSLVLLDLLGPPVYSTPKGIK--------------------------GLR-----------------RLLDKFLSA 186 (326)
T ss_pred cccccceeeecccccccccCCcchh--------------------------HHH-----------------HhhhhhccH
Confidence 99999999 44444322111100 000 000000000
Q ss_pred HHHHHHHhhhhhhhcccchhHHHHHHHhhhhhhhhhcccCchhhhHHHHhhhcccchhccchhhHHHHHHhhhccccccC
Q 020663 157 LHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKM 236 (323)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (323)
...+.... ............. ........+.....+..............+.......+..... .
T Consensus 187 ~~~~~p~~-----~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 251 (326)
T KOG1454|consen 187 LELLIPLS-----LTEPVRLVSEGLL-----RCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLG-----F 251 (326)
T ss_pred hhhcCccc-----cccchhheeHhhh-----cceeeeccccccchhhhhhheecccccchhhhheeeEEEeccC-----c
Confidence 00000000 0000000000000 0000000111111111111111100000000000011000000 0
Q ss_pred CchhHhhhccCC-CCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHHHhc
Q 020663 237 NPPLAKRLHEIS-CPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAF 309 (323)
Q Consensus 237 ~~~~~~~l~~i~-~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 309 (323)
.......++++. +|+++++|+.|.++|.+..+.+.+.+||+++++++++||.+++|+|++++..|..|+..+.
T Consensus 252 ~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 252 DENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred cchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 112334566776 9999999999999999999999999999999999999999999999999999999998753
No 6
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.90 E-value=5.6e-23 Score=164.79 Aligned_cols=225 Identities=21% Similarity=0.201 Sum_probs=140.2
Q ss_pred CCccchhhhchHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccccceeeeecCCCCcchhhhccCcCCCCCccccccc
Q 020663 37 PSINSFRHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTER 116 (323)
Q Consensus 37 ~~~~~~~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (323)
..++...++.|+..++++||.++++++||+||+++|+.+|..+|++|+++|.++.+...|..... . ...+.+-+
T Consensus 92 ~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~--~----~~~~~f~~ 165 (322)
T KOG4178|consen 92 SEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPL--D----SSKAIFGK 165 (322)
T ss_pred ceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchh--h----hhccccCc
Confidence 34557789999999999999999999999999999999999999999999999987653322111 0 00000000
Q ss_pred cchhhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhcccchhHHHHHHHhhhhhhhhh--cc
Q 020663 117 DTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRR--AW 194 (323)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 194 (323)
+ +...+.+.. ......+.....+. ................. .-
T Consensus 166 ~--------------~y~~~fQ~~----------~~~E~~~s~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 210 (322)
T KOG4178|consen 166 S--------------YYICLFQEP----------GKPETELSKDDTEM-----------LVKTFRTRKTPGPLIVPKQPN 210 (322)
T ss_pred c--------------ceeEecccc----------CcchhhhccchhHH-----------hHHhhhccccCCccccCCCCC
Confidence 0 000000000 00000000000000 00000000000000000 00
Q ss_pred cCchhhhHHHHhhhcccchhccchhhHHHHHHhhhccccccCCchhHhhhccCCCCEEEEecCCCCCCCch-HHHHHHhh
Q 020663 195 YNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSW-NAERLSRA 273 (323)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~-~~~~~~~~ 273 (323)
..+.++.++.++.+...+...+ ..+.+++++.+.++.. .....+.++++|+++|+|+.|.+.+.. ..+.+.+.
T Consensus 211 ~~~~w~t~edi~~~~~~f~~~g-~~gplNyyrn~~r~w~-----a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~ 284 (322)
T KOG4178|consen 211 ENPLWLTEEDIAFYVSKFQIDG-FTGPLNYYRNFRRNWE-----AAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKD 284 (322)
T ss_pred CccchhhHHHHHHHHhcccccc-ccccchhhHHHhhCch-----hccccccccccceEEEEecCcccccchhHHHHHHHh
Confidence 1134566666776666664444 5566677877766542 123556789999999999999998765 56777777
Q ss_pred CCCc-EEEEcCCCCCCccccChHHHHHHHHHHHHHh
Q 020663 274 IPGS-TFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 308 (323)
Q Consensus 274 ~~~~-~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 308 (323)
+|+. +.++++++||+++.|+|+++++.|.+|+++.
T Consensus 285 vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 285 VPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred hccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 8875 7888999999999999999999999999875
No 7
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.90 E-value=3.7e-22 Score=170.75 Aligned_cols=241 Identities=13% Similarity=0.099 Sum_probs=131.9
Q ss_pred hccCCCccchhhhchHHHHHHHhCCceeE-EEEechhhHHHHHHHHhcccccceeeeecCCCCcchhh-hccCcCCCCCc
Q 020663 33 CAICPSINSFRHFGCCTKTMIYLNLVKQW-LARHSAGALVAVNSYFEAPERVAALILIAPAILAPRLI-QKVDEANPLGR 110 (323)
Q Consensus 33 ~~~~~~~~~~~~~~dl~~ll~~l~~~~~~-lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~~~~~~-~~~~~~~~~~~ 110 (323)
...+|.++..++++++..+++++|+++++ ++||||||++++.+|.++|++|+++|++++........ ..
T Consensus 135 ~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~~~~~~--------- 205 (389)
T PRK06765 135 GMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDAWTSVN--------- 205 (389)
T ss_pred CCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCChhHHHH---------
Confidence 33689999999999999999999999997 99999999999999999999999999998764332111 00
Q ss_pred cccccccchhhhhchhhHHHHHH-HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhcccchhHHHHHHHhhhhhh
Q 020663 111 NEQTERDTSNLVNLLKPFLKVYT-ILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAA 189 (323)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (323)
+...+. .+.....+..+.+.. .......+.... .... . .......+...+....
T Consensus 206 -----------------~~~~~~~ai~~dp~~~~G~y~~-~~~p~~Gl~~a~-~~~~--~----~~~s~~~~~~~f~r~~ 260 (389)
T PRK06765 206 -----------------VLQNWAEAIRLDPNWKGGKYYG-EEQPMKGLTLAL-RMMT--M----NAFDEHFYETTFPRNA 260 (389)
T ss_pred -----------------HHHHHHHHHHhCCCCCCCCCCC-CCCchHHHHHHH-HHHH--H----HcCCHHHHHHHcCcCc
Confidence 000000 000000000000000 000000000000 0000 0 0000000001110000
Q ss_pred -hhh-cccC-chh-hhHHHHhhhcccchhccchhhHHHHHHhhhccccccCCchhHhhhccCCCCEEEEecCCCCCCCch
Q 020663 190 -VRR-AWYN-SKE-VAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSW 265 (323)
Q Consensus 190 -~~~-~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~ 265 (323)
... .... ... -.+..+......+........++...+.+...+......++.+.+.++++|+++|+|++|.++|++
T Consensus 261 ~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~ 340 (389)
T PRK06765 261 SIEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPR 340 (389)
T ss_pred cccccccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHH
Confidence 000 0000 000 000111111111111111122222222222221111223577889999999999999999999999
Q ss_pred HHHHHHhhCC----CcEEEEcCC-CCCCccccChHHHHHHHHHHHHH
Q 020663 266 NAERLSRAIP----GSTFEVIKN-CGHVPQEEKVEEFVSIVARFLQR 307 (323)
Q Consensus 266 ~~~~~~~~~~----~~~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~~ 307 (323)
..+++.+.++ +++++++++ +||.+++++|+++++.|.+||++
T Consensus 341 ~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 341 YNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred HHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 9999998886 689999985 89999999999999999999975
No 8
>PLN02578 hydrolase
Probab=99.89 E-value=4.7e-22 Score=170.29 Aligned_cols=222 Identities=17% Similarity=0.227 Sum_probs=125.0
Q ss_pred CccchhhhchHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccccceeeeecCCCCcchhhhccCcCCCCCcccccccc
Q 020663 38 SINSFRHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERD 117 (323)
Q Consensus 38 ~~~~~~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (323)
.++...+++|+.++++.++.++++++||||||.+++.+|.++|++|+++|++++........... .+.
T Consensus 132 ~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~------------~~~ 199 (354)
T PLN02578 132 EYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREK------------EEA 199 (354)
T ss_pred ccCHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCcccccccccc------------ccc
Confidence 35667788999999999999999999999999999999999999999999999764321111000 000
Q ss_pred chhhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhcccchhHHHHHHHhhhhhhhhhcccCc
Q 020663 118 TSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNS 197 (323)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (323)
..... ..+.... .................. .......... . ....+.+.
T Consensus 200 ~~~~~---~~~~~~~-----------------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~--------~~~~~~~~ 248 (354)
T PLN02578 200 IVVEE---TVLTRFV-----------------VKPLKEWFQRVVLGFLFW--QAKQPSRIES-V--------LKSVYKDK 248 (354)
T ss_pred ccccc---chhhHHH-----------------hHHHHHHHHHHHHHHHHH--HhcCHHHHHH-H--------HHHhcCCc
Confidence 00000 0000000 000000000000000000 0000000000 0 00001111
Q ss_pred hhhhHHHHhhhcccchhccchhhHHHHHHhhhccccccCCchhHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCc
Q 020663 198 KEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGS 277 (323)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~ 277 (323)
...++...+.+............+.+.+....... ...+..+.+.++++|+++|+|++|.+++.+..+.+.+.+|++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a 325 (354)
T PLN02578 249 SNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQ---SRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDT 325 (354)
T ss_pred ccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCC---CCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCC
Confidence 11222222222111111111122222222211111 112345678899999999999999999999999999999999
Q ss_pred EEEEcCCCCCCccccChHHHHHHHHHHHH
Q 020663 278 TFEVIKNCGHVPQEEKVEEFVSIVARFLQ 306 (323)
Q Consensus 278 ~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 306 (323)
+++++ ++||+++.|+|+++++.|.+|++
T Consensus 326 ~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 326 TLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred EEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 99999 58999999999999999999985
No 9
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.88 E-value=5.2e-22 Score=159.70 Aligned_cols=215 Identities=19% Similarity=0.238 Sum_probs=118.3
Q ss_pred chhhhchHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccccceeeeecCCCCcchhhhccCcCCCCCccccccccchh
Q 020663 41 SFRHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSN 120 (323)
Q Consensus 41 ~~~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (323)
...+++-++++....|++|.+|+|||+||++|..||.+||++|+.|||++|.+......... ...
T Consensus 143 e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~--------------~~~- 207 (365)
T KOG4409|consen 143 EKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEP--------------EFT- 207 (365)
T ss_pred hHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcch--------------hhc-
Confidence 34788999999999999999999999999999999999999999999999987644220000 000
Q ss_pred hhhchhhHHHHHHHHHHHHHHH-HHHHHHHHHhHHHHHHHHHHHhhhhhhhcccchhHHHHHHHhhhhhhhhhcccCchh
Q 020663 121 LVNLLKPFLKVYTILSMFLKYI-TQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKE 199 (323)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (323)
.+....+..+....... +-.+. .... +. ...+...+..+.+.. -+..
T Consensus 208 -----~~~~~w~~~~~~~~~~~nPl~~L-------R~~G-------------p~----Gp~Lv~~~~~d~~~k---~~~~ 255 (365)
T KOG4409|consen 208 -----KPPPEWYKALFLVATNFNPLALL-------RLMG-------------PL----GPKLVSRLRPDRFRK---FPSL 255 (365)
T ss_pred -----CCChHHHhhhhhhhhcCCHHHHH-------Hhcc-------------cc----chHHHhhhhHHHHHh---cccc
Confidence 11111111111000000 00000 0000 00 001111111111110 0011
Q ss_pred hhHHHHhhhcc-cchhccchhhHHHHHHhhhccccccCCchhHhhhccCC--CCEEEEecCCCCCCCchHHHHHHhhC--
Q 020663 200 VAEHVIEGYTK-PLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEIS--CPVLIVTGDTDRIVPSWNAERLSRAI-- 274 (323)
Q Consensus 200 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~Pvl~i~G~~D~~~~~~~~~~~~~~~-- 274 (323)
..++.+..|.- .....+.....+.. +.......+..+...+..++ ||+++|+|++|.+-.. ...++.+.+
T Consensus 256 ~~ed~l~~YiY~~n~~~psgE~~fk~----l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD~~-~g~~~~~~~~~ 330 (365)
T KOG4409|consen 256 IEEDFLHEYIYHCNAQNPSGETAFKN----LFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWMDKN-AGLEVTKSLMK 330 (365)
T ss_pred chhHHHHHHHHHhcCCCCcHHHHHHH----HHhccchhhhhHHHHHHhhccCCCEEEEecCcccccch-hHHHHHHHhhc
Confidence 12222122111 11111111111111 11112223335556666666 9999999999986543 445555532
Q ss_pred CCcEEEEcCCCCCCccccChHHHHHHHHHHHHH
Q 020663 275 PGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQR 307 (323)
Q Consensus 275 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 307 (323)
..++.+++|++||+++.++|+.|++.|.++++.
T Consensus 331 ~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 331 EYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred ccceEEEecCCCceeecCCHHHHHHHHHHHHhc
Confidence 358999999999999999999999999999975
No 10
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.88 E-value=1.5e-21 Score=161.95 Aligned_cols=68 Identities=31% Similarity=0.558 Sum_probs=63.1
Q ss_pred hhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHHHhcC
Q 020663 242 KRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAFG 310 (323)
Q Consensus 242 ~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 310 (323)
..+.++++|+++|+|++|.+++++..+.+.+.+|+++++++++ ||+++.|+|+++++.|.+|+++..+
T Consensus 201 ~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~~~~ 268 (276)
T TIGR02240 201 HWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIIDD-GHLFLITRAEAVAPIIMKFLAEERQ 268 (276)
T ss_pred hHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEcC-CCchhhccHHHHHHHHHHHHHHhhh
Confidence 5578999999999999999999999999999999999999975 9999999999999999999998654
No 11
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.88 E-value=5.3e-21 Score=156.98 Aligned_cols=65 Identities=22% Similarity=0.382 Sum_probs=61.2
Q ss_pred hhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHHH
Q 020663 243 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQR 307 (323)
Q Consensus 243 ~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 307 (323)
.++.+++|+++|+|++|..++++..+.+.+.+|++++++++++||+++.+.|+++++.|.+||.+
T Consensus 190 ~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 190 KIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred ccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 45678999999999999999999999999999999999999999999999999999999999975
No 12
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.87 E-value=3.6e-21 Score=158.00 Aligned_cols=69 Identities=26% Similarity=0.372 Sum_probs=63.6
Q ss_pred hhHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHHH
Q 020663 239 PLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQR 307 (323)
Q Consensus 239 ~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 307 (323)
+....+.++++|+++|+|++|.++|.+..+.+.+.+++++++++|++||++++|+|++|++.|.+|-++
T Consensus 187 ~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 187 DLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred ccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 445678899999999999999999999999999999999999999999999999999999999999654
No 13
>PRK07581 hypothetical protein; Validated
Probab=99.87 E-value=6.4e-21 Score=162.81 Aligned_cols=71 Identities=20% Similarity=0.282 Sum_probs=66.4
Q ss_pred hhHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCC-CCCCccccChHHHHHHHHHHHHHhc
Q 020663 239 PLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKN-CGHVPQEEKVEEFVSIVARFLQRAF 309 (323)
Q Consensus 239 ~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 309 (323)
+....+.+|++|+|+|+|++|..+|++..+.+.+.+|+++++++++ +||++++++|++++..|.+||++..
T Consensus 266 d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 266 DLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAALKELL 337 (339)
T ss_pred CHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHHH
Confidence 5567888999999999999999999999999999999999999998 9999999999999999999999864
No 14
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.87 E-value=1.4e-21 Score=162.94 Aligned_cols=68 Identities=32% Similarity=0.539 Sum_probs=63.6
Q ss_pred hhHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHH
Q 020663 239 PLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQ 306 (323)
Q Consensus 239 ~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 306 (323)
+....+.++++|+++|+|++|.+++++..+.+.+.+|++++++++++||+++.|+|+++++.|.+||+
T Consensus 214 ~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 214 DVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred hHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 34466789999999999999999999999999999999999999999999999999999999999996
No 15
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.87 E-value=8.4e-21 Score=162.57 Aligned_cols=68 Identities=22% Similarity=0.444 Sum_probs=62.0
Q ss_pred hhHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEE-----EcCCCCCCccccChHHHHHHHHHHHH
Q 020663 239 PLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFE-----VIKNCGHVPQEEKVEEFVSIVARFLQ 306 (323)
Q Consensus 239 ~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~-----~i~~~gH~~~~e~p~~~~~~i~~fl~ 306 (323)
++.+.+++|++|+++|+|++|.++|++..+.+.+.+|+.+++ +++++||++++|+|+++++.|.+||+
T Consensus 279 ~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 279 SLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred CHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 566889999999999999999999999999999999987765 56789999999999999999999984
No 16
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.87 E-value=1.6e-20 Score=163.51 Aligned_cols=65 Identities=20% Similarity=0.398 Sum_probs=60.3
Q ss_pred hhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccc-cChHHHHHHHHHHHHH
Q 020663 243 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQE-EKVEEFVSIVARFLQR 307 (323)
Q Consensus 243 ~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~ 307 (323)
...++++|+++|+|++|.++|++..+.+++.+|++++++++++||+++. |+|+++++.|.+|.+.
T Consensus 413 l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 413 VRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred HHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 3347899999999999999999999999999999999999999999885 9999999999999864
No 17
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.86 E-value=2.8e-21 Score=162.46 Aligned_cols=66 Identities=30% Similarity=0.449 Sum_probs=59.8
Q ss_pred hhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcE---EEEcCCCCCCccccChHHHHHHHHHHHHHh
Q 020663 242 KRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGST---FEVIKNCGHVPQEEKVEEFVSIVARFLQRA 308 (323)
Q Consensus 242 ~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~---~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 308 (323)
..+.++++|+++|+|++|.++|... +.+.+.+++++ +.+++++||++++|+|+++++.|.+|++++
T Consensus 233 ~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 233 AVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred HhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 4568899999999999999999866 88999898776 889999999999999999999999999865
No 18
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.86 E-value=1.8e-20 Score=161.79 Aligned_cols=72 Identities=24% Similarity=0.322 Sum_probs=65.4
Q ss_pred hhHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCc----EEEEcC-CCCCCccccChHHHHHHHHHHHHHhcC
Q 020663 239 PLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGS----TFEVIK-NCGHVPQEEKVEEFVSIVARFLQRAFG 310 (323)
Q Consensus 239 ~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~----~~~~i~-~~gH~~~~e~p~~~~~~i~~fl~~~~~ 310 (323)
++.+.+.+|++|+|+|+|++|.++|++..+.+.+.++++ ++++++ ++||++++|+|+++++.|.+||++...
T Consensus 300 d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 300 DLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAAR 376 (379)
T ss_pred CHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhhh
Confidence 467889999999999999999999999999999999887 777775 899999999999999999999998653
No 19
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.86 E-value=1.1e-20 Score=161.44 Aligned_cols=203 Identities=15% Similarity=0.152 Sum_probs=118.8
Q ss_pred CccchhhhchHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccccceeeeecCCCCcchhhhccCcCCCCCcccccccc
Q 020663 38 SINSFRHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERD 117 (323)
Q Consensus 38 ~~~~~~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (323)
.++..++++|+.++++++++++++|+|||+||.+++.+|.++|++|+++|++++........
T Consensus 177 ~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~------------------ 238 (383)
T PLN03084 177 NYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAK------------------ 238 (383)
T ss_pred cCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCcccccc------------------
Confidence 35778899999999999999999999999999999999999999999999999864211000
Q ss_pred chhhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhcccchhHHHHHHHhhhhhhhhhcccCc
Q 020663 118 TSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNS 197 (323)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (323)
.+ ..+.. +.. .....++... .. ......+ . . ..+
T Consensus 239 ---~p---~~l~~------------------~~~---~l~~~~~~~~-------~~-----~~~~~~~-----~-~-~~~ 272 (383)
T PLN03084 239 ---LP---STLSE------------------FSN---FLLGEIFSQD-------PL-----RASDKAL-----T-S-CGP 272 (383)
T ss_pred ---ch---HHHHH------------------HHH---HHhhhhhhcc-------hH-----HHHhhhh-----c-c-cCc
Confidence 00 00000 000 0000000000 00 0000000 0 0 001
Q ss_pred hhhhHHHHhhhcccchhccchhhHH-HHHHhhhccccccCCchhHhhh--ccCCCCEEEEecCCCCCCCchHHHHHHhhC
Q 020663 198 KEVAEHVIEGYTKPLRVKGWDRALV-EFTAALLIDNESKMNPPLAKRL--HEISCPVLIVTGDTDRIVPSWNAERLSRAI 274 (323)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l--~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~ 274 (323)
....++....+...+...+...... ...+.+... ......+....+ .++++|+++|+|+.|.+++.+..+.+.+.
T Consensus 273 ~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~-l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~- 350 (383)
T PLN03084 273 YAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKE-LKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKS- 350 (383)
T ss_pred cCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcc-cchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHh-
Confidence 1111222222222222111111111 111111110 000000111111 46899999999999999999888888887
Q ss_pred CCcEEEEcCCCCCCccccChHHHHHHHHHHHH
Q 020663 275 PGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQ 306 (323)
Q Consensus 275 ~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 306 (323)
++.++++++++||++++|+|+++++.|.+|++
T Consensus 351 ~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 351 SQHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred cCCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 58899999999999999999999999999986
No 20
>PRK06489 hypothetical protein; Provisional
Probab=99.86 E-value=2.6e-20 Score=160.00 Aligned_cols=70 Identities=20% Similarity=0.288 Sum_probs=63.2
Q ss_pred hhHhhhccCCCCEEEEecCCCCCCCchHH--HHHHhhCCCcEEEEcCCC----CCCccccChHHHHHHHHHHHHHhc
Q 020663 239 PLAKRLHEISCPVLIVTGDTDRIVPSWNA--ERLSRAIPGSTFEVIKNC----GHVPQEEKVEEFVSIVARFLQRAF 309 (323)
Q Consensus 239 ~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~--~~~~~~~~~~~~~~i~~~----gH~~~~e~p~~~~~~i~~fl~~~~ 309 (323)
+....+.+|++|+|+|+|++|.++|++.. +.+.+.+|+++++++|++ ||.++ ++|+++++.|.+||+++.
T Consensus 283 d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 283 NPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred ChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhcc
Confidence 45577899999999999999999998865 789999999999999996 99997 899999999999998764
No 21
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.86 E-value=7e-21 Score=158.39 Aligned_cols=58 Identities=21% Similarity=0.272 Sum_probs=54.2
Q ss_pred CCCEEEEecCCCCCCCch-HHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHH
Q 020663 248 SCPVLIVTGDTDRIVPSW-NAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFL 305 (323)
Q Consensus 248 ~~Pvl~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 305 (323)
++|+++|+|++|.++++. ..+.+.+.+|+.++++++++||++++|+|+++++.|.+||
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 899999999999988654 5788999999999999999999999999999999999997
No 22
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.86 E-value=1.5e-20 Score=160.45 Aligned_cols=67 Identities=21% Similarity=0.381 Sum_probs=60.9
Q ss_pred hhccCCCCEEEEecCCCCCCCchHHHHHHhhC-CCcEEEEcCC-CCCCccccChHHHHHHHHHHHHHhc
Q 020663 243 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAI-PGSTFEVIKN-CGHVPQEEKVEEFVSIVARFLQRAF 309 (323)
Q Consensus 243 ~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 309 (323)
.+.+|++|+|+|+|++|.++|++..+.+.+.+ |+++++++++ +||.+++|+|++|++.|.+||++..
T Consensus 272 ~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 272 DPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRSTG 340 (343)
T ss_pred ChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhcc
Confidence 36789999999999999999988888888877 6999999985 9999999999999999999998754
No 23
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.85 E-value=1.3e-20 Score=156.59 Aligned_cols=66 Identities=24% Similarity=0.534 Sum_probs=61.5
Q ss_pred HhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHH
Q 020663 241 AKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQ 306 (323)
Q Consensus 241 ~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 306 (323)
...++++++|+++|+|++|..+|++..+.+.+.+++++++.++++||+++.|.|+++++.|.+|++
T Consensus 213 ~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 213 NRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred hhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 355778999999999999999999999999999999999999999999999999999999999984
No 24
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.85 E-value=4e-20 Score=151.71 Aligned_cols=67 Identities=28% Similarity=0.522 Sum_probs=62.2
Q ss_pred hHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHH
Q 020663 240 LAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQ 306 (323)
Q Consensus 240 ~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 306 (323)
....+.++++|+++++|++|..+|++..+.+.+.+++++++.++++||++++++|+++++.|.+||+
T Consensus 190 ~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 190 VSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred cHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 3456788999999999999999999999999999999999999999999999999999999999985
No 25
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.85 E-value=4e-20 Score=149.23 Aligned_cols=64 Identities=33% Similarity=0.549 Sum_probs=59.2
Q ss_pred hhHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHH
Q 020663 239 PLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVA 302 (323)
Q Consensus 239 ~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 302 (323)
+....+..+++|+++++|++|.++|++....+.+.+|+.++++++++||+.+++.|+++++.|.
T Consensus 166 ~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 166 DPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred cccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 4456678899999999999999999999999999999999999999999999999999999885
No 26
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.84 E-value=7.6e-20 Score=156.61 Aligned_cols=70 Identities=19% Similarity=0.326 Sum_probs=62.1
Q ss_pred hHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhC--CCcEEEEcCCCCCCccccChHH----HHHHHHHHHHHhc
Q 020663 240 LAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAI--PGSTFEVIKNCGHVPQEEKVEE----FVSIVARFLQRAF 309 (323)
Q Consensus 240 ~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl~~~~ 309 (323)
....+.++++|+|+|+|++|.++|++..+.+.+.+ ++.++++++++||.++.|+|++ +.+.|.+||+++.
T Consensus 271 ~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 271 IEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred HHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 34567889999999999999999999999998887 5689999999999999999987 8889999998764
No 27
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.84 E-value=5.3e-20 Score=149.82 Aligned_cols=53 Identities=17% Similarity=0.165 Sum_probs=48.8
Q ss_pred cchhhhchHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccc-cceeeeecCC
Q 020663 40 NSFRHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPER-VAALILIAPA 92 (323)
Q Consensus 40 ~~~~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~-v~~lil~~~~ 92 (323)
+...+++|+.+++++++.++++++||||||.+|+.+|.++|+. |++++++++.
T Consensus 48 ~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 48 GFADVSRLLSQTLQSYNILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred CHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCC
Confidence 5678899999999999999999999999999999999999764 9999999865
No 28
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.84 E-value=1.7e-19 Score=144.89 Aligned_cols=181 Identities=25% Similarity=0.333 Sum_probs=114.8
Q ss_pred CccchhhhchHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccccceeeeecCCCCcchhh--hccCcCCCCCcccccc
Q 020663 38 SINSFRHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAILAPRLI--QKVDEANPLGRNEQTE 115 (323)
Q Consensus 38 ~~~~~~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 115 (323)
..+..++++|+.+++++++.++++++|||+||.+++.++.++|++|+++|+++|........ ..
T Consensus 46 ~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~-------------- 111 (228)
T PF12697_consen 46 PYSIEDYAEDLAELLDALGIKKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSF-------------- 111 (228)
T ss_dssp GGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHH--------------
T ss_pred Ccchhhhhhhhhhcccccccccccccccccccccccccccccccccccceeecccccccccccccc--------------
Confidence 45677899999999999999999999999999999999999999999999999875432110 00
Q ss_pred ccchhhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhcccchhHHHHHHHhhhhhhhhhccc
Q 020663 116 RDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWY 195 (323)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (323)
...+. .. ............... .+... .
T Consensus 112 ---------~~~~~---~~--------------~~~~~~~~~~~~~~~----------------~~~~~----------~ 139 (228)
T PF12697_consen 112 ---------GPSFI---RR--------------LLAWRSRSLRRLASR----------------FFYRW----------F 139 (228)
T ss_dssp ---------HHHHH---HH--------------HHHHHHHHHHHHHHH----------------HHHHH----------H
T ss_pred ---------cchhh---hh--------------hhhcccccccccccc----------------ccccc----------c
Confidence 00000 00 000000000000000 00000 0
Q ss_pred CchhhhHHHHhhhcccchhccchhhHHHHHHhhhccccccCCchhHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCC
Q 020663 196 NSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIP 275 (323)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~ 275 (323)
..... ...... ....+....... ....+....++.+++|+++++|++|..++.+..+.+.+.++
T Consensus 140 ~~~~~-~~~~~~---------~~~~~~~~~~~~------~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~ 203 (228)
T PF12697_consen 140 DGDEP-EDLIRS---------SRRALAEYLRSN------LWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLP 203 (228)
T ss_dssp THHHH-HHHHHH---------HHHHHHHHHHHH------HHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHST
T ss_pred ccccc-cccccc---------cccccccccccc------cccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCC
Confidence 00000 000000 001111111110 00014456778889999999999999999999999999999
Q ss_pred CcEEEEcCCCCCCccccChHHHHHH
Q 020663 276 GSTFEVIKNCGHVPQEEKVEEFVSI 300 (323)
Q Consensus 276 ~~~~~~i~~~gH~~~~e~p~~~~~~ 300 (323)
++++++++++||++++|+|+++++.
T Consensus 204 ~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 204 NAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp TEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred CCEEEEECCCCCccHHHCHHHHhcC
Confidence 9999999999999999999999863
No 29
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.83 E-value=1.8e-19 Score=150.30 Aligned_cols=67 Identities=24% Similarity=0.472 Sum_probs=60.0
Q ss_pred hhHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHH
Q 020663 239 PLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQ 306 (323)
Q Consensus 239 ~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 306 (323)
+....+.++++|+++++|++|.+ +++..+.+.+.+++.++++++++||+++.|+|+++++.|.+||+
T Consensus 222 ~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 222 DITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred CHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 44567788999999999999985 56778889998999999999999999999999999999999984
No 30
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.83 E-value=3.9e-19 Score=154.10 Aligned_cols=73 Identities=16% Similarity=0.155 Sum_probs=60.6
Q ss_pred hhHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCC-CcEEEEcCCCCCCccccChHHHHHHHHHHHHHhcCCC
Q 020663 239 PLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIP-GSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAFGYS 312 (323)
Q Consensus 239 ~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~ 312 (323)
+....+.++++|+++|+|++|.+.+ .....+.+..+ .+++++++++||+++.|+|++|++.|.+|++......
T Consensus 316 ~~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~~ 389 (402)
T PLN02894 316 PLLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSPD 389 (402)
T ss_pred hHhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccCC
Confidence 5556788899999999999998765 44555555553 5889999999999999999999999999998876543
No 31
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.82 E-value=2.3e-19 Score=145.88 Aligned_cols=67 Identities=27% Similarity=0.430 Sum_probs=62.1
Q ss_pred hhHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHH
Q 020663 239 PLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFL 305 (323)
Q Consensus 239 ~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 305 (323)
+....+.++++|+++|+|++|..+|++..+.+.+.+|++++++++++||+++.|+|+++++.|.+|+
T Consensus 179 ~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 179 DLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred cHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 3456678999999999999999999999999999999999999999999999999999999999985
No 32
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.82 E-value=1.7e-19 Score=147.15 Aligned_cols=67 Identities=31% Similarity=0.603 Sum_probs=61.8
Q ss_pred hHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHH
Q 020663 240 LAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQ 306 (323)
Q Consensus 240 ~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 306 (323)
....+.++++|+++++|++|..+|.+..+.+.+.+++.+++.++++||++++++|+++.+.|.+|++
T Consensus 185 ~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 185 FRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred HHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 4466788999999999999999999989999999999999999999999999999999999999974
No 33
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.80 E-value=3.1e-18 Score=145.80 Aligned_cols=70 Identities=14% Similarity=0.204 Sum_probs=60.7
Q ss_pred HhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCC--CcEEEEcCCCCCCccccChH----HHHHHHHHHHHHhcC
Q 020663 241 AKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIP--GSTFEVIKNCGHVPQEEKVE----EFVSIVARFLQRAFG 310 (323)
Q Consensus 241 ~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~----~~~~~i~~fl~~~~~ 310 (323)
...+.++++|+|+|+|++|.++|++..+.+.+.++ +.++++++++||.++.++|+ ++.+.|.+||.+..+
T Consensus 244 ~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~ 319 (330)
T PLN02298 244 GKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCT 319 (330)
T ss_pred HHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhcc
Confidence 35678899999999999999999999998887764 78999999999999998875 477789999988764
No 34
>PHA02857 monoglyceride lipase; Provisional
Probab=99.80 E-value=2.4e-18 Score=142.86 Aligned_cols=69 Identities=14% Similarity=0.243 Sum_probs=61.0
Q ss_pred hHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhC-CCcEEEEcCCCCCCccccCh---HHHHHHHHHHHHHh
Q 020663 240 LAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAI-PGSTFEVIKNCGHVPQEEKV---EEFVSIVARFLQRA 308 (323)
Q Consensus 240 ~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~~ 308 (323)
..+.+.++++|+++|+|++|.++|++..+++.+.+ +++++++++++||.++.|.+ +++.+.|.+||+++
T Consensus 201 ~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 201 VRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred HHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 34667889999999999999999999999998876 46899999999999998875 57999999999875
No 35
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.79 E-value=2.9e-18 Score=139.73 Aligned_cols=66 Identities=30% Similarity=0.500 Sum_probs=58.1
Q ss_pred hHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHH
Q 020663 240 LAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQ 306 (323)
Q Consensus 240 ~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 306 (323)
....+.++++|+++|+|++|..++ +..+.+.+..++++++.+|++||++++++|+++++.|.+|++
T Consensus 186 ~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 186 LWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPNLTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred hHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCCCcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 345677899999999999998774 566778888899999999999999999999999999999984
No 36
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.78 E-value=5.5e-18 Score=139.78 Aligned_cols=63 Identities=14% Similarity=0.177 Sum_probs=57.1
Q ss_pred ccC-CCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHHHh
Q 020663 245 HEI-SCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 308 (323)
Q Consensus 245 ~~i-~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 308 (323)
.++ ++|+++|.|++|..+|++..+.+.+.++..+++.++ +||.+++++|+++++.|.++....
T Consensus 207 ~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 207 GDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELE-SDHSPFFSTPFLLFGLLIKAAASV 270 (273)
T ss_pred cccCccceEEEEeCCCCCCCHHHHHHHHHhCCccEEEEEC-CCCCccccCHHHHHHHHHHHHHHh
Confidence 345 789999999999999999999999999988999996 899999999999999999887643
No 37
>PRK10749 lysophospholipase L2; Provisional
Probab=99.78 E-value=2.8e-18 Score=145.66 Aligned_cols=67 Identities=24% Similarity=0.330 Sum_probs=57.7
Q ss_pred hhhccCCCCEEEEecCCCCCCCchHHHHHHhhC-------CCcEEEEcCCCCCCccccCh---HHHHHHHHHHHHHh
Q 020663 242 KRLHEISCPVLIVTGDTDRIVPSWNAERLSRAI-------PGSTFEVIKNCGHVPQEEKV---EEFVSIVARFLQRA 308 (323)
Q Consensus 242 ~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~-------~~~~~~~i~~~gH~~~~e~p---~~~~~~i~~fl~~~ 308 (323)
..+.++++|+|+|+|++|.+++++..+.+.+.+ ++++++++||+||.++.|.+ +.+.+.|.+||+++
T Consensus 253 ~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 253 AGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred hhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 456789999999999999999999888887765 35689999999999998875 67889999999864
No 38
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.77 E-value=1.1e-17 Score=145.01 Aligned_cols=66 Identities=35% Similarity=0.643 Sum_probs=56.8
Q ss_pred hhHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHHH
Q 020663 239 PLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQR 307 (323)
Q Consensus 239 ~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 307 (323)
+....+.++++|+++++|++|..+|++..+.+ .++.++.+++++||++++++|+++++.|.+||++
T Consensus 305 ~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l---~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 305 DLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL---PDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred hHHHHHhcCCCCEEEEEECCCCccCHHHHhhc---cCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 44566788999999999999999987765443 3468999999999999999999999999999975
No 39
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.77 E-value=8.4e-18 Score=167.09 Aligned_cols=73 Identities=27% Similarity=0.403 Sum_probs=62.2
Q ss_pred hhHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCC------------cEEEEcCCCCCCccccChHHHHHHHHHHHH
Q 020663 239 PLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPG------------STFEVIKNCGHVPQEEKVEEFVSIVARFLQ 306 (323)
Q Consensus 239 ~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~------------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 306 (323)
+..+.+.++++|+|+|+|++|..++ +..+++.+.+++ ++++++|++||++++|+|+++++.|.+||+
T Consensus 1559 dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~ 1637 (1655)
T PLN02980 1559 SLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLT 1637 (1655)
T ss_pred hHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHH
Confidence 4457789999999999999999875 566777777765 489999999999999999999999999999
Q ss_pred HhcCCC
Q 020663 307 RAFGYS 312 (323)
Q Consensus 307 ~~~~~~ 312 (323)
+....+
T Consensus 1638 ~~~~~~ 1643 (1655)
T PLN02980 1638 RLHNSS 1643 (1655)
T ss_pred hccccC
Confidence 876433
No 40
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.76 E-value=1.4e-17 Score=134.00 Aligned_cols=65 Identities=26% Similarity=0.467 Sum_probs=60.9
Q ss_pred ccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHHHhc
Q 020663 245 HEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAF 309 (323)
Q Consensus 245 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 309 (323)
.....||+++.|.++..++.+....+.+.+|+++++.++++||++|.|+|+++.+.|.+|+.+..
T Consensus 250 ~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 250 GPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEEPE 314 (315)
T ss_pred cccccceeEEecCCCCCcChhHHHHHHHhccchheeecccCCceeecCCHHHHHHHHHHHhcccC
Confidence 56688999999999999999999999999999999999999999999999999999999998653
No 41
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.75 E-value=1.9e-18 Score=127.88 Aligned_cols=177 Identities=19% Similarity=0.259 Sum_probs=119.2
Q ss_pred hhhchHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccccceeeeecCCCCcchhhhccCcCCCCCccccccccchhhh
Q 020663 43 RHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLV 122 (323)
Q Consensus 43 ~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (323)
..+++..++++.|..+++.++|+|=||..|+..|+++++.|.++|+.++..........
T Consensus 99 ~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~m--------------------- 157 (277)
T KOG2984|consen 99 KDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAM--------------------- 157 (277)
T ss_pred HhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHH---------------------
Confidence 56777889999999999999999999999999999999999999999987554332211
Q ss_pred hchhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhcccchhHHHHHHHhhhhhhhhhcccCchhhhH
Q 020663 123 NLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAE 202 (323)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (323)
..+++.+ +..|....... +...++.+.++..|.
T Consensus 158 --------------------------a~kgiRd-v~kWs~r~R~P-------------~e~~Yg~e~f~~~wa------- 190 (277)
T KOG2984|consen 158 --------------------------AFKGIRD-VNKWSARGRQP-------------YEDHYGPETFRTQWA------- 190 (277)
T ss_pred --------------------------HHhchHH-Hhhhhhhhcch-------------HHHhcCHHHHHHHHH-------
Confidence 0011111 01111100000 001111111111110
Q ss_pred HHHhhhcccchhccchhhHHHHHHhhhccccccCCch-hHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEE
Q 020663 203 HVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPP-LAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEV 281 (323)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~ 281 (323)
.|...+..+.. + ...+ .+-.+.+++||+++++|+.|++++......+....+.+++.+
T Consensus 191 -------------~wvD~v~qf~~-~-------~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~ 249 (277)
T KOG2984|consen 191 -------------AWVDVVDQFHS-F-------CDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEI 249 (277)
T ss_pred -------------HHHHHHHHHhh-c-------CCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEE
Confidence 11111111110 0 0112 235678999999999999999999988888999999999999
Q ss_pred cCCCCCCccccChHHHHHHHHHHHHHh
Q 020663 282 IKNCGHVPQEEKVEEFVSIVARFLQRA 308 (323)
Q Consensus 282 i~~~gH~~~~e~p~~~~~~i~~fl~~~ 308 (323)
.|.++|.+++.-+++|+..+.+||++.
T Consensus 250 ~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 250 HPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred ccCCCcceeeechHHHHHHHHHHHhcc
Confidence 999999999999999999999999864
No 42
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.74 E-value=6.3e-17 Score=136.12 Aligned_cols=56 Identities=20% Similarity=0.122 Sum_probs=51.1
Q ss_pred ccchhhhchHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccccceeeeecCCCC
Q 020663 39 INSFRHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAIL 94 (323)
Q Consensus 39 ~~~~~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~ 94 (323)
.+..++++|+..+++++++++++++||||||.+++.++.++|++|+++|++++...
T Consensus 76 ~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 76 NTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 34567899999999999999999999999999999999999999999999998654
No 43
>PLN02511 hydrolase
Probab=99.72 E-value=9.5e-17 Score=138.70 Aligned_cols=70 Identities=20% Similarity=0.287 Sum_probs=60.3
Q ss_pred HhhhccCCCCEEEEecCCCCCCCchHH-HHHHhhCCCcEEEEcCCCCCCccccChHH------HHHHHHHHHHHhcC
Q 020663 241 AKRLHEISCPVLIVTGDTDRIVPSWNA-ERLSRAIPGSTFEVIKNCGHVPQEEKVEE------FVSIVARFLQRAFG 310 (323)
Q Consensus 241 ~~~l~~i~~Pvl~i~G~~D~~~~~~~~-~~~~~~~~~~~~~~i~~~gH~~~~e~p~~------~~~~i~~fl~~~~~ 310 (323)
...+.+|++|+++|+|++|+++|.+.. ....+..|++++++++++||..++|.|+. +.+.|.+||+....
T Consensus 291 ~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~ 367 (388)
T PLN02511 291 SDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEE 367 (388)
T ss_pred hhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 356789999999999999999998754 45667789999999999999999999876 58999999987754
No 44
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.71 E-value=1.9e-16 Score=136.36 Aligned_cols=70 Identities=13% Similarity=0.283 Sum_probs=61.3
Q ss_pred HhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCC--CcEEEEcCCCCCCcccc-ChHHHHHHHHHHHHHhcC
Q 020663 241 AKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIP--GSTFEVIKNCGHVPQEE-KVEEFVSIVARFLQRAFG 310 (323)
Q Consensus 241 ~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~~~~ 310 (323)
...+.++++|+|+++|++|.++|++.++.+.+..+ +.+++++++++|.++.| .++++.+.|.+||..+..
T Consensus 317 ~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 317 TRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred HhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 45678899999999999999999999998888764 47899999999998777 799999999999987653
No 45
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.70 E-value=1.3e-15 Score=124.42 Aligned_cols=232 Identities=18% Similarity=0.147 Sum_probs=139.6
Q ss_pred hhccCCCccchhhhchHHHHHHHhCCceeE-EEEechhhHHHHHHHHhcccccceeeeecCCCCcchhhhccCcCCCCCc
Q 020663 32 ICAICPSINSFRHFGCCTKTMIYLNLVKQW-LARHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGR 110 (323)
Q Consensus 32 ~~~~~~~~~~~~~~~dl~~ll~~l~~~~~~-lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~ 110 (323)
....||.+++.|+++.-..++++||++++. +||-||||+.|++++..||++|+++|.+++.......
T Consensus 120 yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~------------ 187 (368)
T COG2021 120 YGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQ------------ 187 (368)
T ss_pred cccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHH------------
Confidence 456789999999999999999999999988 8999999999999999999999999999986443221
Q ss_pred cccccccchhhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhcccchhHHHHHH--Hhhhhh
Q 020663 111 NEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILI--DKFGLA 188 (323)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 188 (323)
...+....+.. +. .-..|.....-.......+-.+.+++. ...+..
T Consensus 188 ------------------~ia~~~~~r~A----------I~----~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~ 235 (368)
T COG2021 188 ------------------NIAFNEVQRQA----------IE----ADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEE 235 (368)
T ss_pred ------------------HHHHHHHHHHH----------HH----hCCCccCCCccCCCCcchhHHHHHHHHHHHccCHH
Confidence 11111111100 00 000000000000000000001111111 001111
Q ss_pred hhhhcccC-----chh--hhHHHHhhhc----ccchhccchhhHHHHHHhhhccccccCCchhHhhhccCCCCEEEEecC
Q 020663 189 AVRRAWYN-----SKE--VAEHVIEGYT----KPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGD 257 (323)
Q Consensus 189 ~~~~~~~~-----~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~ 257 (323)
.+...+.. +.. ......+.|. ..+...-....++...+.+...+....+.++.+.++++++|++++.-+
T Consensus 236 ~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~ 315 (368)
T COG2021 236 ELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGIT 315 (368)
T ss_pred HHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEec
Confidence 11111111 000 0011112221 112222223344444444444444455567888899999999999999
Q ss_pred CCCCCCchHHHHHHhhCCCcE-EEEcC-CCCCCccccChHHHHHHHHHHHHH
Q 020663 258 TDRIVPSWNAERLSRAIPGST-FEVIK-NCGHVPQEEKVEEFVSIVARFLQR 307 (323)
Q Consensus 258 ~D~~~~~~~~~~~~~~~~~~~-~~~i~-~~gH~~~~e~p~~~~~~i~~fl~~ 307 (323)
.|.+.|++..+.+.+.++.+. +++|+ ..||-.++...+.+...|.+||+.
T Consensus 316 sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 316 SDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred ccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 999999999999999998766 66663 579999999999999999999974
No 46
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.70 E-value=3.4e-16 Score=124.13 Aligned_cols=194 Identities=19% Similarity=0.175 Sum_probs=120.5
Q ss_pred chhhhchHHHHHHHhC------CceeEEEEechhhHHHHHHHHhcccccceeeeecCCCCcchhhhccCcCCCCCccccc
Q 020663 41 SFRHFGCCTKTMIYLN------LVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQT 114 (323)
Q Consensus 41 ~~~~~~dl~~ll~~l~------~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (323)
.+..++|+..+.+... ..+..|+||||||.+++.++.+.|+..+++|+++|++........
T Consensus 106 ~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp------------- 172 (313)
T KOG1455|consen 106 FDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKP------------- 172 (313)
T ss_pred HHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCC-------------
Confidence 4567888888888642 247899999999999999999999999999999998765443211
Q ss_pred cccchhhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhcccchhHHHHHHHhhhhhhhhhcc
Q 020663 115 ERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAW 194 (323)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (323)
.++. ......+..+.+++.....+..
T Consensus 173 -----------~p~v---------------------~~~l~~l~~liP~wk~vp~~d~---------------------- 198 (313)
T KOG1455|consen 173 -----------HPPV---------------------ISILTLLSKLIPTWKIVPTKDI---------------------- 198 (313)
T ss_pred -----------CcHH---------------------HHHHHHHHHhCCceeecCCccc----------------------
Confidence 1111 1111111111111110000000
Q ss_pred cCch-hhhHHHHhhhcccchhccchhhHHHHHHhhhccccccCCchhHhhhccCCCCEEEEecCCCCCCCchHHHHHHhh
Q 020663 195 YNSK-EVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRA 273 (323)
Q Consensus 195 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~ 273 (323)
.+.. .........+..++...+..+. +....+++.. .++.+.+.++++|.+++||+.|.++.++..+.+.+.
T Consensus 199 ~~~~~kdp~~r~~~~~npl~y~g~pRl--~T~~ElLr~~-----~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~ 271 (313)
T KOG1455|consen 199 IDVAFKDPEKRKILRSDPLCYTGKPRL--KTAYELLRVT-----ADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEK 271 (313)
T ss_pred cccccCCHHHHHHhhcCCceecCCccH--HHHHHHHHHH-----HHHHHhcccccccEEEEecCCCcccCcHHHHHHHHh
Confidence 0000 0111111122233333332111 1112222211 166788899999999999999999999999999998
Q ss_pred CC--CcEEEEcCCCCCCccc----cChHHHHHHHHHHHHHh
Q 020663 274 IP--GSTFEVIKNCGHVPQE----EKVEEFVSIVARFLQRA 308 (323)
Q Consensus 274 ~~--~~~~~~i~~~gH~~~~----e~p~~~~~~i~~fl~~~ 308 (323)
.+ +.++..+||.-|.++. |+.+.|...|.+||++.
T Consensus 272 A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 272 ASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred ccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 75 6899999999998764 44667888899999764
No 47
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.63 E-value=1.3e-14 Score=109.60 Aligned_cols=68 Identities=24% Similarity=0.407 Sum_probs=59.2
Q ss_pred hhHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCC--CcEEEEcCCCCCCcccc-ChHHHHHHHHHHHH
Q 020663 239 PLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIP--GSTFEVIKNCGHVPQEE-KVEEFVSIVARFLQ 306 (323)
Q Consensus 239 ~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~ 306 (323)
+....+..|..|++++.|++|.++|.+.+..+...+. ..++.+++++||.+-.+ ..+.+.+.|..||+
T Consensus 172 ~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 172 DARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLE 242 (243)
T ss_pred HHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhh
Confidence 4456788999999999999999999999998888763 57899999999988555 58999999999996
No 48
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.63 E-value=1.5e-14 Score=119.89 Aligned_cols=69 Identities=26% Similarity=0.368 Sum_probs=57.1
Q ss_pred hhhccCCCCEEEEecCCCCCCC-chHHHHHHhhC--CCcEEEEcCCCCCCccccC-h--HHHHHHHHHHHHHhcC
Q 020663 242 KRLHEISCPVLIVTGDTDRIVP-SWNAERLSRAI--PGSTFEVIKNCGHVPQEEK-V--EEFVSIVARFLQRAFG 310 (323)
Q Consensus 242 ~~l~~i~~Pvl~i~G~~D~~~~-~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~-p--~~~~~~i~~fl~~~~~ 310 (323)
.....+++|+|+++|+.|.+++ .+...++.+.. ++.++++++|+.|.++.|. . +++.+.+.+|+.+..+
T Consensus 222 ~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 222 RDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred hccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 4456789999999999999999 67666666654 5789999999999998876 4 7899999999987653
No 49
>PRK10985 putative hydrolase; Provisional
Probab=99.62 E-value=1.2e-14 Score=123.08 Aligned_cols=69 Identities=16% Similarity=0.213 Sum_probs=57.6
Q ss_pred HhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccCh-----HHHHHHHHHHHHHhc
Q 020663 241 AKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKV-----EEFVSIVARFLQRAF 309 (323)
Q Consensus 241 ~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p-----~~~~~~i~~fl~~~~ 309 (323)
...++++++|+++|+|++|++++++..+.+.+..+++++++++++||+.+++.. -..-+.+.+|+....
T Consensus 248 ~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 248 LPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYL 321 (324)
T ss_pred HHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhh
Confidence 466789999999999999999998888888778889999999999999988742 356677888886543
No 50
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.59 E-value=2.7e-14 Score=126.04 Aligned_cols=57 Identities=23% Similarity=0.304 Sum_probs=51.0
Q ss_pred hhHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChH
Q 020663 239 PLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVE 295 (323)
Q Consensus 239 ~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 295 (323)
+....+..|++|+++|+|++|.++|++..+.+.+.+++.+..+++++||.+++++|.
T Consensus 406 g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 406 GVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred CEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhCCC
Confidence 445678899999999999999999999999999999999999999999999887753
No 51
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.59 E-value=1.9e-14 Score=123.33 Aligned_cols=65 Identities=22% Similarity=0.319 Sum_probs=54.2
Q ss_pred hhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCC--cEEEEcCCCCCCccccC---hHHHHHHHHHHHHH
Q 020663 242 KRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPG--STFEVIKNCGHVPQEEK---VEEFVSIVARFLQR 307 (323)
Q Consensus 242 ~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~---p~~~~~~i~~fl~~ 307 (323)
..+.++++|+++++|++|.++|++..+.+.+.+++ .++++++ +||...+.. ++++...|.+||.+
T Consensus 280 ~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 280 VDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred ccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 34678899999999999999999999999888864 5677777 699876654 58899999999975
No 52
>PRK05855 short chain dehydrogenase; Validated
Probab=99.58 E-value=1.3e-14 Score=133.25 Aligned_cols=66 Identities=24% Similarity=0.236 Sum_probs=59.6
Q ss_pred hccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHHHhcC
Q 020663 244 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAFG 310 (323)
Q Consensus 244 l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 310 (323)
+..+++|+++|+|++|.++|++..+.+.+.+++.++++++ +||+++.|+|+++++.|.+|+.....
T Consensus 229 ~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~~ 294 (582)
T PRK05855 229 ERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVEG 294 (582)
T ss_pred cCCccCceEEEEeCCCcccCHHHhccccccCCcceEEEcc-CCCcchhhChhHHHHHHHHHHHhccC
Confidence 4558999999999999999999889898888888888886 69999999999999999999988654
No 53
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.58 E-value=2e-13 Score=109.09 Aligned_cols=203 Identities=21% Similarity=0.257 Sum_probs=114.9
Q ss_pred hhccCCCccchhhhchHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccccceeeeecCCCCcchhhhccCcCCCCCcc
Q 020663 32 ICAICPSINSFRHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRN 111 (323)
Q Consensus 32 ~~~~~~~~~~~~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~ 111 (323)
+...++--+.+++++++.+++++++++.++-+|--.|+.|..++|..||++|.++||+++....+.+.+.
T Consensus 73 ~p~~y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew---------- 142 (283)
T PF03096_consen 73 LPEGYQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEW---------- 142 (283)
T ss_dssp --TT-----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHH----------
T ss_pred ccccccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHH----------
Confidence 3334334457799999999999999999999999999999999999999999999999998766654321
Q ss_pred ccccccchhhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhc-ccchhHHHHHH-Hhhhhhh
Q 020663 112 EQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRS-AVGVTLVRILI-DKFGLAA 189 (323)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~ 189 (323)
+... +....++. .........+. ..++...
T Consensus 143 ----------------~~~K--------------------------------~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~ 174 (283)
T PF03096_consen 143 ----------------FYQK--------------------------------LSSWLLYSYGMTSSVKDYLLWHYFGKEE 174 (283)
T ss_dssp ----------------HHHH--------------------------------HH-------CTTS-HHHHHHHHHS-HHH
T ss_pred ----------------HHHH--------------------------------HhcccccccccccchHHhhhhccccccc
Confidence 1110 00000000 00001111111 1121111
Q ss_pred hhhcccCchhhhHHHHhhhcccchhccchhhHHHHHHhhhccccccCCchhHhhhccCCCCEEEEecCCCCCCCchHHHH
Q 020663 190 VRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAER 269 (323)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~ 269 (323)
.. ...++.+.|...+........+..+...+.. +.|+....+...||+|++.|+..+... ...+
T Consensus 175 ~~--------~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~------R~DL~~~~~~~~c~vLlvvG~~Sp~~~--~vv~ 238 (283)
T PF03096_consen 175 EE--------NNSDLVQTYRQHLDERINPKNLALFLNSYNS------RTDLSIERPSLGCPVLLVVGDNSPHVD--DVVE 238 (283)
T ss_dssp HH--------CT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----------SECTTCCS-EEEEEETTSTTHH--HHHH
T ss_pred cc--------ccHHHHHHHHHHHhcCCCHHHHHHHHHHHhc------cccchhhcCCCCCCeEEEEecCCcchh--hHHH
Confidence 10 1233455555444433333444444444432 235666667778999999999998764 3455
Q ss_pred HHhhC-C-CcEEEEcCCCCCCccccChHHHHHHHHHHHHHh
Q 020663 270 LSRAI-P-GSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 308 (323)
Q Consensus 270 ~~~~~-~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 308 (323)
+...+ | +.++..+++||=.+..|+|+.+++.+.=||+..
T Consensus 239 ~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 239 MNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp HHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred HHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccC
Confidence 66665 3 578999999999999999999999999999864
No 54
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.58 E-value=5.7e-14 Score=119.08 Aligned_cols=64 Identities=14% Similarity=0.279 Sum_probs=55.1
Q ss_pred hhccC--CCCEEEEecCCCCCCCchHHHHHHhhC--CCcEEEEcCCCCCCccccC-hHHHHHHHHHHHH
Q 020663 243 RLHEI--SCPVLIVTGDTDRIVPSWNAERLSRAI--PGSTFEVIKNCGHVPQEEK-VEEFVSIVARFLQ 306 (323)
Q Consensus 243 ~l~~i--~~Pvl~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~ 306 (323)
.+..+ ++|+++++|++|.+++++..+.+.+.. ++.+++++++++|.++.|. ++++.+.|.+||+
T Consensus 263 ~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 263 DIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred hHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 34445 799999999999999999888887665 5789999999999999886 7899999999985
No 55
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.57 E-value=8.6e-14 Score=120.95 Aligned_cols=61 Identities=11% Similarity=0.157 Sum_probs=55.8
Q ss_pred ccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHHHh
Q 020663 245 HEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 308 (323)
Q Consensus 245 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 308 (323)
.++++|+|+|+|++|.++|++..+.+.+..|+.+++++|++ ++.+.++++.+.|.+||+++
T Consensus 352 ~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 352 RRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK---PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred cCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---CccCCHHHHHHHHHHHHHHH
Confidence 56899999999999999999999999998999999999985 56689999999999999875
No 56
>PLN02872 triacylglycerol lipase
Probab=99.57 E-value=2e-13 Score=117.26 Aligned_cols=68 Identities=21% Similarity=0.304 Sum_probs=58.8
Q ss_pred hhccC--CCCEEEEecCCCCCCCchHHHHHHhhCCC-cEEEEcCCCCCC---ccccChHHHHHHHHHHHHHhcC
Q 020663 243 RLHEI--SCPVLIVTGDTDRIVPSWNAERLSRAIPG-STFEVIKNCGHV---PQEEKVEEFVSIVARFLQRAFG 310 (323)
Q Consensus 243 ~l~~i--~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~---~~~e~p~~~~~~i~~fl~~~~~ 310 (323)
.+.++ ++|+++++|++|.+++++..+.+.+.+++ .+++.++++||. ...+.|+++.+.|.+|+++..+
T Consensus 318 ~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~ 391 (395)
T PLN02872 318 DLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGK 391 (395)
T ss_pred CcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhh
Confidence 35666 58999999999999999999999999887 688899999995 4568899999999999987654
No 57
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.56 E-value=1.2e-13 Score=114.07 Aligned_cols=67 Identities=19% Similarity=0.215 Sum_probs=53.0
Q ss_pred hhHhhhccCCCCEEEEecCCCCCCCchHH------HHHHhhC--CCcEEEEcCCCCCCccccC-hHHHHHHHHHHHH
Q 020663 239 PLAKRLHEISCPVLIVTGDTDRIVPSWNA------ERLSRAI--PGSTFEVIKNCGHVPQEEK-VEEFVSIVARFLQ 306 (323)
Q Consensus 239 ~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~------~~~~~~~--~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~ 306 (323)
+....+.++++|+++++|+.|...+ ... ..+.+.+ ++++++.++++||++..+. ++++.+.|.+||+
T Consensus 198 ~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 198 RMKAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred HHHHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 3446677889999999999998763 332 4455544 7899999999999995554 6999999999996
No 58
>PRK11071 esterase YqiA; Provisional
Probab=99.56 E-value=9.5e-14 Score=107.86 Aligned_cols=55 Identities=15% Similarity=0.140 Sum_probs=46.6
Q ss_pred CCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHH
Q 020663 247 ISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQ 306 (323)
Q Consensus 247 i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 306 (323)
..+|+++|+|++|.++|.+.+..+.+. ++.+.++|++|.. ...+++.+.|.+|++
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~---~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAA---CRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHh---cceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 678899999999999999998888874 5677889999987 344889999999975
No 59
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.52 E-value=8.2e-13 Score=104.15 Aligned_cols=204 Identities=21% Similarity=0.210 Sum_probs=130.9
Q ss_pred hccCCCccchhhhchHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccccceeeeecCCCCcchhhhccCcCCCCCccc
Q 020663 33 CAICPSINSFRHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNE 112 (323)
Q Consensus 33 ~~~~~~~~~~~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~ 112 (323)
...++--+.++++++|..++++++++.++-+|--.|+.|..++|..||++|.+|||+++....+.+.+
T Consensus 97 p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwie------------ 164 (326)
T KOG2931|consen 97 PEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIE------------ 164 (326)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHH------------
Confidence 33444445779999999999999999999999999999999999999999999999999866665442
Q ss_pred cccccchhhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhhhhhhcccchhHHHHHH-Hhhhhhhhh
Q 020663 113 QTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILI-DKFGLAAVR 191 (323)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 191 (323)
++...+...+ ++.. -........++ ..|+.+.
T Consensus 165 --------------w~~~K~~s~~-----------------------l~~~--------Gmt~~~~d~ll~H~Fg~e~-- 197 (326)
T KOG2931|consen 165 --------------WAYNKVSSNL-----------------------LYYY--------GMTQGVKDYLLAHHFGKEE-- 197 (326)
T ss_pred --------------HHHHHHHHHH-----------------------HHhh--------chhhhHHHHHHHHHhcccc--
Confidence 2221111000 0000 00001111111 1122111
Q ss_pred hcccCchhhhHHHHhhhcccchhccchhhHHHHHHhhhccccccCCchhHhhhc----cCCCCEEEEecCCCCCCCchHH
Q 020663 192 RAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLH----EISCPVLIVTGDTDRIVPSWNA 267 (323)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~i~~Pvl~i~G~~D~~~~~~~~ 267 (323)
..-..++++.|.+.+........+..+...+.. +.|+..... .++||++++.|++.+.+.. .
T Consensus 198 ------~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~------R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~~--v 263 (326)
T KOG2931|consen 198 ------LGNNSDIVQEYRQHLGERLNPKNLALFLNAYNG------RRDLSIERPKLGTTLKCPVLLVVGDNSPHVSA--V 263 (326)
T ss_pred ------ccccHHHHHHHHHHHHhcCChhHHHHHHHHhcC------CCCccccCCCcCccccccEEEEecCCCchhhh--h
Confidence 111455666666655544443444444433322 112222222 5679999999999988653 3
Q ss_pred HHHHhhC-C-CcEEEEcCCCCCCccccChHHHHHHHHHHHHHhc
Q 020663 268 ERLSRAI-P-GSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAF 309 (323)
Q Consensus 268 ~~~~~~~-~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 309 (323)
.++...+ | +.++..+.+||-.+..++|..+++.+.=|++...
T Consensus 264 v~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~G 307 (326)
T KOG2931|consen 264 VECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMG 307 (326)
T ss_pred hhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHccCC
Confidence 4444444 3 5789999999999999999999999999998764
No 60
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.51 E-value=3.2e-13 Score=107.61 Aligned_cols=64 Identities=25% Similarity=0.381 Sum_probs=52.2
Q ss_pred CCCCEEEEecCCCCCCCchHHHHHHhhC----CCcEEEEcCCCCCCcc-ccChHHHHHHHHHHHHHhcC
Q 020663 247 ISCPVLIVTGDTDRIVPSWNAERLSRAI----PGSTFEVIKNCGHVPQ-EEKVEEFVSIVARFLQRAFG 310 (323)
Q Consensus 247 i~~Pvl~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~-~e~p~~~~~~i~~fl~~~~~ 310 (323)
+++|+|+++|++|..+|++.+..+.+.+ .+++++++|++||.+. .+...+..+.+.+||+++..
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcC
Confidence 7899999999999999988877776654 3589999999999554 45567889999999998764
No 61
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.51 E-value=3.9e-13 Score=129.68 Aligned_cols=69 Identities=26% Similarity=0.406 Sum_probs=60.8
Q ss_pred hhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEE-EEcCCCCCCcccc---ChHHHHHHHHHHHHHhcCC
Q 020663 243 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTF-EVIKNCGHVPQEE---KVEEFVSIVARFLQRAFGY 311 (323)
Q Consensus 243 ~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~-~~i~~~gH~~~~e---~p~~~~~~i~~fl~~~~~~ 311 (323)
.+.+|++|+|+|+|++|.++|++..+.+.+.+|+.++ ..++++||+.++- .++++...|.+||+++...
T Consensus 292 ~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~~ 364 (994)
T PRK07868 292 TLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEGD 364 (994)
T ss_pred chhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhccC
Confidence 5789999999999999999999999999999999987 6778999987654 4888999999999987643
No 62
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.45 E-value=5.3e-13 Score=103.32 Aligned_cols=63 Identities=19% Similarity=0.313 Sum_probs=57.0
Q ss_pred ccCCCCEEEEecCCCCCCCchHHHHHHhhCC-CcEEEEcCCCCCCccccChHHHHHHHHHHHHHh
Q 020663 245 HEISCPVLIVTGDTDRIVPSWNAERLSRAIP-GSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 308 (323)
Q Consensus 245 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 308 (323)
..++||++++.|++|+.++.+.+..|.+... ..++.+++| ||+...++.+++.+.|.+.+...
T Consensus 173 ~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdG-gHFfl~~~~~~v~~~i~~~l~~~ 236 (244)
T COG3208 173 APLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDG-GHFFLNQQREEVLARLEQHLAHH 236 (244)
T ss_pred CCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecC-cceehhhhHHHHHHHHHHHhhhh
Confidence 5689999999999999999999999998887 689999985 99999999999999999998643
No 63
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.43 E-value=3.2e-12 Score=104.74 Aligned_cols=66 Identities=36% Similarity=0.630 Sum_probs=55.6
Q ss_pred HhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCC-cEEEEcCCCCCCccccChHHHHHHHHHHHH
Q 020663 241 AKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPG-STFEVIKNCGHVPQEEKVEEFVSIVARFLQ 306 (323)
Q Consensus 241 ~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 306 (323)
......+++|+++++|++|.+.+......+.+..++ .++++++++||+++.++|+.+++.+.+|+.
T Consensus 214 ~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 214 RAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred chhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 355677899999999999976666556777777885 899999999999999999999999888543
No 64
>PRK13604 luxD acyl transferase; Provisional
Probab=99.40 E-value=8.1e-12 Score=102.10 Aligned_cols=50 Identities=16% Similarity=0.218 Sum_probs=44.4
Q ss_pred hhhccCCCCEEEEecCCCCCCCchHHHHHHhhCC--CcEEEEcCCCCCCccc
Q 020663 242 KRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIP--GSTFEVIKNCGHVPQE 291 (323)
Q Consensus 242 ~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~ 291 (323)
+.+.++++|+|+|+|+.|.++|.+.++.+.+.++ +++++.+||++|.+..
T Consensus 196 ~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 196 NKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGE 247 (307)
T ss_pred HHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccCc
Confidence 5567788999999999999999999999988775 6999999999998873
No 65
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.34 E-value=4.9e-12 Score=99.06 Aligned_cols=74 Identities=16% Similarity=0.082 Sum_probs=60.5
Q ss_pred cccccccccchhhhhhccCCCccchhhhchHHHHHHHhC---CceeEEEEechhhHHHHHHHHh--cccccceeeeecCC
Q 020663 18 GRSFFFPFHSNWIIICAICPSINSFRHFGCCTKTMIYLN---LVKQWLARHSAGALVAVNSYFE--APERVAALILIAPA 92 (323)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~ll~~l~---~~~~~lvGhS~Gg~ia~~~a~~--~P~~v~~lil~~~~ 92 (323)
+|.+..+..+..+.-+.....++.+.++.|+.++++.+= ..+++||||||||.+|.+.|.. -|. +.+++.++.+
T Consensus 103 ~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 103 CRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred eeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 566666676767766667777889999999999999862 4679999999999999888874 576 9999999975
No 66
>PRK10566 esterase; Provisional
Probab=99.33 E-value=4.8e-11 Score=97.53 Aligned_cols=62 Identities=23% Similarity=0.307 Sum_probs=49.7
Q ss_pred hhccC-CCCEEEEecCCCCCCCchHHHHHHhhCC------CcEEEEcCCCCCCccccChHHHHHHHHHHHHHh
Q 020663 243 RLHEI-SCPVLIVTGDTDRIVPSWNAERLSRAIP------GSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 308 (323)
Q Consensus 243 ~l~~i-~~Pvl~i~G~~D~~~~~~~~~~~~~~~~------~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 308 (323)
.+.++ ++|+++++|++|.++|.+..+.+.+.++ +++++.++++||.+. ....+.+.+||+++
T Consensus 180 ~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~----~~~~~~~~~fl~~~ 248 (249)
T PRK10566 180 QLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT----PEALDAGVAFFRQH 248 (249)
T ss_pred hhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC----HHHHHHHHHHHHhh
Confidence 34555 6999999999999999998888887664 257788999999864 34678899999864
No 67
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.32 E-value=1.2e-11 Score=92.18 Aligned_cols=44 Identities=34% Similarity=0.640 Sum_probs=36.5
Q ss_pred ccCCCCEEEEecCCCCCCCchHHHHHHhhCC-CcEEEEcCCCCCC
Q 020663 245 HEISCPVLIVTGDTDRIVPSWNAERLSRAIP-GSTFEVIKNCGHV 288 (323)
Q Consensus 245 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~ 288 (323)
...++|+++++|++|..++.+..+.+.+.++ +.++++++|++|+
T Consensus 101 ~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 101 AKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp TTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred hccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 4556699999999999999998988888776 5899999999995
No 68
>PRK11460 putative hydrolase; Provisional
Probab=99.32 E-value=1.9e-11 Score=98.30 Aligned_cols=58 Identities=12% Similarity=0.238 Sum_probs=44.9
Q ss_pred CCCEEEEecCCCCCCCchHHHHHHhhCC----CcEEEEcCCCCCCccccChHHHHHHHHHHH
Q 020663 248 SCPVLIVTGDTDRIVPSWNAERLSRAIP----GSTFEVIKNCGHVPQEEKVEEFVSIVARFL 305 (323)
Q Consensus 248 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 305 (323)
++|+++++|++|.++|.+..+.+.+.+. +++++.++++||.+..+.-+.+.+.|.++|
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 5799999999999999988877777653 468888999999997555555555555544
No 69
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.31 E-value=9.7e-11 Score=99.75 Aligned_cols=68 Identities=22% Similarity=0.252 Sum_probs=55.1
Q ss_pred HhhhccCC-CCEEEEecCCCCCCCchHHHHHHhhC---C--CcEEEEcCCCCCCcccc---ChHHHHHHHHHHHHHh
Q 020663 241 AKRLHEIS-CPVLIVTGDTDRIVPSWNAERLSRAI---P--GSTFEVIKNCGHVPQEE---KVEEFVSIVARFLQRA 308 (323)
Q Consensus 241 ~~~l~~i~-~Pvl~i~G~~D~~~~~~~~~~~~~~~---~--~~~~~~i~~~gH~~~~e---~p~~~~~~i~~fl~~~ 308 (323)
.-.+++|+ +|++.|.|++|.++++...+.+.+.+ + ..+.+..+++||+.... .++++...|.+||.++
T Consensus 330 ~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 330 RVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred EecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 35578899 99999999999999999999888874 4 35577777899986543 3788889999999753
No 70
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.31 E-value=2.4e-11 Score=94.89 Aligned_cols=68 Identities=25% Similarity=0.445 Sum_probs=57.2
Q ss_pred hhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCc-EEEEcCCCCCCccccChHHHHHHHHHHHHHhcC
Q 020663 242 KRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGS-TFEVIKNCGHVPQEEKVEEFVSIVARFLQRAFG 310 (323)
Q Consensus 242 ~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 310 (323)
+.++.|+||+|+++|+.|.+++....+.+.+..++. +..++.|+||.-..- ..++.+.+..|+.....
T Consensus 186 ~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~-~~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 186 EKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIEL-YPEYIEHLRRFISSVLP 254 (258)
T ss_pred CcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCccccc-CHHHHHHHHHHHHHhcc
Confidence 566889999999999999999999999999998764 778888999987644 44588999999987654
No 71
>PLN02442 S-formylglutathione hydrolase
Probab=99.30 E-value=3.9e-11 Score=99.48 Aligned_cols=48 Identities=19% Similarity=0.286 Sum_probs=40.2
Q ss_pred chHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccccceeeeecCCC
Q 020663 46 GCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAI 93 (323)
Q Consensus 46 ~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~ 93 (323)
..+....+.++.++++|+||||||..|+.++.++|+++++++.+++..
T Consensus 131 ~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 178 (283)
T PLN02442 131 KLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIA 178 (283)
T ss_pred HHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCcc
Confidence 334444445677889999999999999999999999999999999864
No 72
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.23 E-value=2e-10 Score=86.65 Aligned_cols=60 Identities=30% Similarity=0.553 Sum_probs=48.6
Q ss_pred CCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHHH
Q 020663 247 ISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQR 307 (323)
Q Consensus 247 i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 307 (323)
.+||||-++|..|.++|.+.++++++.+|+-++.++||+.|.....+ ++.......|.+.
T Consensus 198 ~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~L~iIEgADHnyt~~q-~~l~~lgl~f~k~ 257 (269)
T KOG4667|consen 198 KQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHKLEIIEGADHNYTGHQ-SQLVSLGLEFIKT 257 (269)
T ss_pred ccCceEEEeccCCceeechhHHHHHHhccCCceEEecCCCcCccchh-hhHhhhcceeEEe
Confidence 36999999999999999999999999999999999999999764332 3344555555443
No 73
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.17 E-value=2.4e-10 Score=91.12 Aligned_cols=57 Identities=28% Similarity=0.426 Sum_probs=41.2
Q ss_pred CCCEEEEecCCCCCCCchHHHHHHhhC----CCcEEEEcCCCCCCccccChHHHHHHHHHHHHHh
Q 020663 248 SCPVLIVTGDTDRIVPSWNAERLSRAI----PGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 308 (323)
Q Consensus 248 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 308 (323)
++|+++++|+.|.++|.+..+...+.+ .+++++.+++.||.+. .+..+.+.+||+++
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhhh
Confidence 689999999999999987776666554 3588999999999886 45666788888764
No 74
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.15 E-value=7.3e-10 Score=97.33 Aligned_cols=68 Identities=10% Similarity=-0.007 Sum_probs=51.8
Q ss_pred hhhhhhccCCCccchhhhchHHHHHHHh----CCceeEEEEechhhHHHHH----HHHhccc-ccceeeeecCCCCc
Q 020663 28 NWIIICAICPSINSFRHFGCCTKTMIYL----NLVKQWLARHSAGALVAVN----SYFEAPE-RVAALILIAPAILA 95 (323)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~dl~~ll~~l----~~~~~~lvGhS~Gg~ia~~----~a~~~P~-~v~~lil~~~~~~~ 95 (323)
.|..-.......+.++|++.+.+.++.. |.++++++|||+||.++.. +++++++ +|++++++.++...
T Consensus 254 sW~nP~~~~r~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf 330 (560)
T TIGR01839 254 SWRNPDKAHREWGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDS 330 (560)
T ss_pred eCCCCChhhcCCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeeccccc
Confidence 3444333445566778887766666654 6789999999999999997 8888986 89999999987553
No 75
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.15 E-value=1.5e-10 Score=87.36 Aligned_cols=68 Identities=16% Similarity=0.315 Sum_probs=56.7
Q ss_pred hhhccCCCCEEEEecCCCCCCCchHHHHHHhhCC--CcEEEEcCCCCCCccccChHHHHHHHHHHHHHhcC
Q 020663 242 KRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIP--GSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAFG 310 (323)
Q Consensus 242 ~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 310 (323)
..+.+.++|.|+|.|..|.++||.+++.+.+.+| +.++..+|++.|.--+- .+-..+.|.+||.+...
T Consensus 215 ~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i-~dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 215 RKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI-CDGYFQAIEDFLAEVVK 284 (300)
T ss_pred hhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE-eccHHHHHHHHHHHhcc
Confidence 3345678999999999999999999999999997 47899999999964332 35688999999998865
No 76
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.12 E-value=6.2e-10 Score=90.24 Aligned_cols=68 Identities=28% Similarity=0.417 Sum_probs=15.0
Q ss_pred hhHhhhccCCCCEEEEecCCCCCCCchHH-----HHHHhhCCC----cEEEEcCCCCCCccccCh----HHHHHHHHHHH
Q 020663 239 PLAKRLHEISCPVLIVTGDTDRIVPSWNA-----ERLSRAIPG----STFEVIKNCGHVPQEEKV----EEFVSIVARFL 305 (323)
Q Consensus 239 ~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~-----~~~~~~~~~----~~~~~i~~~gH~~~~e~p----~~~~~~i~~fl 305 (323)
.+.+.+..+++|+|++.+++|..+|...- +++.+..+. ..-.+|||++|.+-.+.. +.+.+.|..||
T Consensus 223 ~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl 302 (303)
T PF08538_consen 223 RLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFL 302 (303)
T ss_dssp HHHHTGGG--S-EEEEEE--TT----------------------------------------------------------
T ss_pred HHHHHhccCCCceEEEecCCCceecccccccccccccccccccccccccccccccccccccccccccccccccccccccC
Confidence 56678889999999999999999986433 233333221 124478999998865443 35778888887
Q ss_pred H
Q 020663 306 Q 306 (323)
Q Consensus 306 ~ 306 (323)
+
T Consensus 303 ~ 303 (303)
T PF08538_consen 303 K 303 (303)
T ss_dssp -
T ss_pred C
Confidence 4
No 77
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.10 E-value=3.7e-09 Score=87.51 Aligned_cols=49 Identities=20% Similarity=0.230 Sum_probs=42.6
Q ss_pred hchHHHHHHH---hCCceeEEEEechhhHHHHHHHHhcccccceeeeecCCC
Q 020663 45 FGCCTKTMIY---LNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAI 93 (323)
Q Consensus 45 ~~dl~~ll~~---l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~ 93 (323)
++++..+++. ++.++++++||||||.+++.++.++|+.++++++++|..
T Consensus 122 ~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 122 VQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred HHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 5677777777 345689999999999999999999999999999999864
No 78
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.10 E-value=1.5e-10 Score=87.75 Aligned_cols=46 Identities=24% Similarity=0.507 Sum_probs=37.3
Q ss_pred CCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccC
Q 020663 247 ISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEK 293 (323)
Q Consensus 247 i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 293 (323)
+.+|.++|.+++|+++|.+.++.+++.+ +++++.++++||+.-.+-
T Consensus 113 l~~~~~viaS~nDp~vp~~~a~~~A~~l-~a~~~~~~~~GHf~~~~G 158 (171)
T PF06821_consen 113 LPFPSIVIASDNDPYVPFERAQRLAQRL-GAELIILGGGGHFNAASG 158 (171)
T ss_dssp HHCCEEEEEETTBSSS-HHHHHHHHHHH-T-EEEEETS-TTSSGGGT
T ss_pred cCCCeEEEEcCCCCccCHHHHHHHHHHc-CCCeEECCCCCCcccccC
Confidence 3467799999999999999999999998 789999999999976543
No 79
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.07 E-value=4.4e-10 Score=88.89 Aligned_cols=50 Identities=20% Similarity=0.175 Sum_probs=38.8
Q ss_pred hhchHHHHHHHh-CC--ceeEEEEechhhHHHHHHHHhcccccceeeeecCCCC
Q 020663 44 HFGCCTKTMIYL-NL--VKQWLARHSAGALVAVNSYFEAPERVAALILIAPAIL 94 (323)
Q Consensus 44 ~~~dl~~ll~~l-~~--~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~ 94 (323)
+.+...+++... .+ +++.|+|.|.||-+|+.+|..+| .|+++|.++|...
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 445555555554 33 58999999999999999999999 7999999998744
No 80
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.05 E-value=2.4e-09 Score=85.53 Aligned_cols=66 Identities=26% Similarity=0.367 Sum_probs=43.0
Q ss_pred hhccCCCCEEEEecCCCCCCCchHHHHHHhhC----CCcEEEEcCCCCCCccccC--------hHHHHHHHHHHHHHh
Q 020663 243 RLHEISCPVLIVTGDTDRIVPSWNAERLSRAI----PGSTFEVIKNCGHVPQEEK--------VEEFVSIVARFLQRA 308 (323)
Q Consensus 243 ~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~e~--------p~~~~~~i~~fl~~~ 308 (323)
...++++|+++++|++|+.++.+..+.+.+.+ ...+++++||++|-+.... .++..+.+.+||+++
T Consensus 140 ~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 140 DAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp HGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred hhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 34667899999999999999988766665554 5689999999999765443 244556777777654
No 81
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.03 E-value=2.5e-09 Score=98.19 Aligned_cols=69 Identities=23% Similarity=0.341 Sum_probs=57.5
Q ss_pred hhhccCCCCEEEEecCCCCCCCchHHHHHHhhC----CCcEEEEcCCCCCCccc-cChHHHHHHHHHHHHHhcC
Q 020663 242 KRLHEISCPVLIVTGDTDRIVPSWNAERLSRAI----PGSTFEVIKNCGHVPQE-EKVEEFVSIVARFLQRAFG 310 (323)
Q Consensus 242 ~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~-e~p~~~~~~i~~fl~~~~~ 310 (323)
....++++|+|+|||++|..++.+.+..+...+ .+++++++|+.||.+.. ++...+.+.+.+|++++..
T Consensus 545 ~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 545 FYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred hhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhc
Confidence 445789999999999999999988887777655 35889999999998765 5577888999999988754
No 82
>COG0400 Predicted esterase [General function prediction only]
Probab=99.03 E-value=2.2e-09 Score=83.41 Aligned_cols=54 Identities=17% Similarity=0.098 Sum_probs=46.2
Q ss_pred chhhhchHHHHHHHhCC--ceeEEEEechhhHHHHHHHHhcccccceeeeecCCCC
Q 020663 41 SFRHFGCCTKTMIYLNL--VKQWLARHSAGALVAVNSYFEAPERVAALILIAPAIL 94 (323)
Q Consensus 41 ~~~~~~dl~~ll~~l~~--~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~ 94 (323)
+..+++-+..+.++.++ ++++++|+|-||++++.+...+|+.++++|+.+|...
T Consensus 80 ~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~ 135 (207)
T COG0400 80 TEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLP 135 (207)
T ss_pred HHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCC
Confidence 44566667777777777 7899999999999999999999999999999998743
No 83
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.01 E-value=1.2e-08 Score=78.25 Aligned_cols=51 Identities=20% Similarity=0.099 Sum_probs=41.9
Q ss_pred chhhhchHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccccceeeeecCCCC
Q 020663 41 SFRHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAIL 94 (323)
Q Consensus 41 ~~~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~ 94 (323)
+....+.+.++++..+.+.+.|||+||||..|..+|.+++ +.+ |+++|...
T Consensus 42 p~~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~ 92 (187)
T PF05728_consen 42 PEEAIAQLEQLIEELKPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVR 92 (187)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCC
Confidence 4455677888888888777999999999999999999986 444 99998754
No 84
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.99 E-value=1.7e-08 Score=80.20 Aligned_cols=56 Identities=23% Similarity=0.249 Sum_probs=47.8
Q ss_pred chhhhchHHHHHHHhCCc-eeEEEEechhhHHHHHHHHhcccccceeeeecCCCCcchh
Q 020663 41 SFRHFGCCTKTMIYLNLV-KQWLARHSAGALVAVNSYFEAPERVAALILIAPAILAPRL 98 (323)
Q Consensus 41 ~~~~~~dl~~ll~~l~~~-~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~~~~~ 98 (323)
-.+-..-+.++++.++++ +++.+|||.||-.|+.+|..+| +.++++++|++..+..
T Consensus 86 n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r~Hk 142 (297)
T PF06342_consen 86 NEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLRPHK 142 (297)
T ss_pred hHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCcccccc
Confidence 445666789999999985 6778999999999999999996 6799999999887754
No 85
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.94 E-value=6e-09 Score=84.57 Aligned_cols=67 Identities=19% Similarity=0.263 Sum_probs=54.5
Q ss_pred hhhccCCCCEEEEecCCCCCCCchHHHHHHh-hCCCcEEEEcCCCCCCcccc----ChH-HHHHHHHHHHHHh
Q 020663 242 KRLHEISCPVLIVTGDTDRIVPSWNAERLSR-AIPGSTFEVIKNCGHVPQEE----KVE-EFVSIVARFLQRA 308 (323)
Q Consensus 242 ~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~-~~~~~~~~~i~~~gH~~~~e----~p~-~~~~~i~~fl~~~ 308 (323)
..+.+|.+|+++|++.+|++++++...+... ..|++.+..-+.+||..++. +|. ...+.|.+|++..
T Consensus 268 ~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 268 PLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred ccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHH
Confidence 5678999999999999999999988876666 66788888888899988776 343 5667788888754
No 86
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.93 E-value=1e-08 Score=85.74 Aligned_cols=51 Identities=8% Similarity=-0.010 Sum_probs=42.8
Q ss_pred hhchHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccc-cceeeeecCCCC
Q 020663 44 HFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPER-VAALILIAPAIL 94 (323)
Q Consensus 44 ~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~-v~~lil~~~~~~ 94 (323)
+.+.+..+.+..|.+++.++|||.||+++..+++.+|.+ |++++++.+...
T Consensus 167 l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~D 218 (445)
T COG3243 167 LSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVD 218 (445)
T ss_pred HHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecchh
Confidence 334566666777889999999999999999999999988 999999887644
No 87
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.81 E-value=6.8e-08 Score=71.15 Aligned_cols=61 Identities=25% Similarity=0.302 Sum_probs=46.0
Q ss_pred cCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCcc---ccChHHHHHHHHHHHHH
Q 020663 246 EISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQ---EEKVEEFVSIVARFLQR 307 (323)
Q Consensus 246 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~---~e~p~~~~~~i~~fl~~ 307 (323)
...-|.+++..++|++++.+.++.+++..+ +.++.+.++||+-- ...-.+....+.+++.+
T Consensus 115 ~lpfps~vvaSrnDp~~~~~~a~~~a~~wg-s~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 115 PLPFPSVVVASRNDPYVSYEHAEDLANAWG-SALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred cCCCceeEEEecCCCCCCHHHHHHHHHhcc-HhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 445699999999999999999999999885 55677777899743 23344566666666654
No 88
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=98.81 E-value=1.7e-07 Score=79.00 Aligned_cols=68 Identities=19% Similarity=0.321 Sum_probs=50.2
Q ss_pred HhhhccCCCCEEEEecCCCCCCCchHH-HHHHhhCCCcEEEEcCCCCCCccccC----hHHHHHH-HHHHHHHh
Q 020663 241 AKRLHEISCPVLIVTGDTDRIVPSWNA-ERLSRAIPGSTFEVIKNCGHVPQEEK----VEEFVSI-VARFLQRA 308 (323)
Q Consensus 241 ~~~l~~i~~Pvl~i~G~~D~~~~~~~~-~~~~~~~~~~~~~~i~~~gH~~~~e~----p~~~~~~-i~~fl~~~ 308 (323)
...+++|++|+++|++.+|+++|++.. .......|++-+++-..+||..++|. +....+. +.+|+...
T Consensus 315 ~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~ 388 (409)
T KOG1838|consen 315 SNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNA 388 (409)
T ss_pred hhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHH
Confidence 467889999999999999999998644 45555668877777778899988876 2223333 66666544
No 89
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.79 E-value=2.3e-07 Score=74.77 Aligned_cols=56 Identities=20% Similarity=0.061 Sum_probs=43.0
Q ss_pred CccchhhhchHHHHHHHhCCc-eeEEEEechhhHHHHHHHHhcc---cccceeeeecCCC
Q 020663 38 SINSFRHFGCCTKTMIYLNLV-KQWLARHSAGALVAVNSYFEAP---ERVAALILIAPAI 93 (323)
Q Consensus 38 ~~~~~~~~~dl~~ll~~l~~~-~~~lvGhS~Gg~ia~~~a~~~P---~~v~~lil~~~~~ 93 (323)
.-+.+++++...+.+....-+ +++|+|||+||.+|+.+|.+.- ..|..++++++..
T Consensus 45 ~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 45 PDSIEELASRYAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp ESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred CCCHHHHHHHHHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCC
Confidence 345667788766666665544 9999999999999999998643 3589999999653
No 90
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.78 E-value=1.4e-07 Score=77.84 Aligned_cols=57 Identities=23% Similarity=0.365 Sum_probs=49.3
Q ss_pred CCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCc-cccChHHHHHHHHHHHH
Q 020663 249 CPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVP-QEEKVEEFVSIVARFLQ 306 (323)
Q Consensus 249 ~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~ 306 (323)
-.+++|.+++|.++|......+.+..|++++..+++ ||.- ++-+.+.+.+.|.+-++
T Consensus 290 ~~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 290 SAIIFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CcEEEEEecCceEechhhcchHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 348999999999999988889999999999999986 9964 66778889999888765
No 91
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.77 E-value=1.2e-07 Score=68.45 Aligned_cols=54 Identities=15% Similarity=0.034 Sum_probs=42.7
Q ss_pred hhhchHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccccceeeeecCCCCcc
Q 020663 43 RHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAILAP 96 (323)
Q Consensus 43 ~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~~~ 96 (323)
.+...+.++.+.+.-.+.++-||||||-++..++...-..|+++++++=+..+|
T Consensus 74 ~~~~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhpp 127 (213)
T COG3571 74 EYIVAIAQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPP 127 (213)
T ss_pred HHHHHHHHHHhcccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCC
Confidence 455666777777766799999999999999999987666699999998554433
No 92
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.75 E-value=1e-06 Score=72.25 Aligned_cols=59 Identities=27% Similarity=0.229 Sum_probs=44.9
Q ss_pred CCCccchhhhchHHHHHHHh------CCceeEEEEechhhHHHHHHHHhcc---cccceeeeecCCCC
Q 020663 36 CPSINSFRHFGCCTKTMIYL------NLVKQWLARHSAGALVAVNSYFEAP---ERVAALILIAPAIL 94 (323)
Q Consensus 36 ~~~~~~~~~~~dl~~ll~~l------~~~~~~lvGhS~Gg~ia~~~a~~~P---~~v~~lil~~~~~~ 94 (323)
.+.++.++-++-..++++++ .-.+++|+|||.|+.+++++..++| .+|.+++++-|.+.
T Consensus 56 ~~~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 56 GRLFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred CCccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 34445555555555555553 2357999999999999999999999 78999999999754
No 93
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.69 E-value=1.7e-07 Score=69.98 Aligned_cols=60 Identities=23% Similarity=0.312 Sum_probs=48.7
Q ss_pred ccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHH
Q 020663 245 HEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQ 306 (323)
Q Consensus 245 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 306 (323)
.-..+|.++|+|+.|.+++.+..-++++. -..+++++++++||.+. +-..+.+.|.+|+.
T Consensus 146 ~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i~i~~a~HFF~g-Kl~~l~~~i~~~l~ 205 (210)
T COG2945 146 APCPSPGLVIQGDADDVVDLVAVLKWQES-IKITVITIPGADHFFHG-KLIELRDTIADFLE 205 (210)
T ss_pred cCCCCCceeEecChhhhhcHHHHHHhhcC-CCCceEEecCCCceecc-cHHHHHHHHHHHhh
Confidence 44567999999999999988777777766 35678899999999884 45668899999985
No 94
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.68 E-value=6.8e-07 Score=76.43 Aligned_cols=68 Identities=22% Similarity=0.226 Sum_probs=54.7
Q ss_pred hhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEE---cCCCCCCc---cccChHHHHHHHHHHHHHhc
Q 020663 242 KRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEV---IKNCGHVP---QEEKVEEFVSIVARFLQRAF 309 (323)
Q Consensus 242 ~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~---i~~~gH~~---~~e~p~~~~~~i~~fl~~~~ 309 (323)
-.+..+++|+.+.+|++|.++.++..+.+....+++.... +++-.|+= -.+.++++.+.|.+.++...
T Consensus 326 Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 326 YDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred CCccccccCEEEEecCCcccCCHHHHHHHHHhcccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 4567789999999999999999999998888877754433 78888952 34569999999999998654
No 95
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.68 E-value=5.7e-07 Score=72.23 Aligned_cols=65 Identities=23% Similarity=0.405 Sum_probs=49.6
Q ss_pred ccCCCCEEEEecCCCCCCCchHHHHHHhhCC----CcEEEEcCCCCCCccccC-----------hHHHHHHHHHHHHHhc
Q 020663 245 HEISCPVLIVTGDTDRIVPSWNAERLSRAIP----GSTFEVIKNCGHVPQEEK-----------VEEFVSIVARFLQRAF 309 (323)
Q Consensus 245 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~-----------p~~~~~~i~~fl~~~~ 309 (323)
.++++|+++..|+.|..+|....+.+.+.+. +.++.++++++|-++.+. .+.-.+.+.+|+++..
T Consensus 155 ~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 155 PKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred ccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 5789999999999999999886666666542 577899999889776432 3456677888887764
No 96
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.66 E-value=3.1e-07 Score=77.03 Aligned_cols=67 Identities=25% Similarity=0.289 Sum_probs=45.1
Q ss_pred hhHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCC-CcEEEEcCCCCCCccccChHHHHHHHHHHHHHh
Q 020663 239 PLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIP-GSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 308 (323)
Q Consensus 239 ~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 308 (323)
|.....+.|++|+++-.|-.|.++||...-.....++ ..++.++|..||....+ .-.+...+||.++
T Consensus 253 D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~~---~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 253 DAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGPE---FQEDKQLNFLKEH 320 (320)
T ss_dssp -HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTHH---HHHHHHHHHHHH-
T ss_pred hHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchhh---HHHHHHHHHHhcC
Confidence 4456678899999999999999999998888888776 47899999999976533 2266777777653
No 97
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.65 E-value=1.6e-06 Score=76.74 Aligned_cols=61 Identities=25% Similarity=0.379 Sum_probs=48.1
Q ss_pred CCCCEEEEecCCCCCCCchHHHHHHhhC------------------------------C-----CcEEEEcCCCCCCccc
Q 020663 247 ISCPVLIVTGDTDRIVPSWNAERLSRAI------------------------------P-----GSTFEVIKNCGHVPQE 291 (323)
Q Consensus 247 i~~Pvl~i~G~~D~~~~~~~~~~~~~~~------------------------------~-----~~~~~~i~~~gH~~~~ 291 (323)
-.++|++..|+.|.+++....+++.+.+ . +.+++.+.++||+++.
T Consensus 363 ~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~ 442 (462)
T PTZ00472 363 DGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPM 442 (462)
T ss_pred cCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChh
Confidence 3589999999999999855444443322 2 4566778899999999
Q ss_pred cChHHHHHHHHHHHHH
Q 020663 292 EKVEEFVSIVARFLQR 307 (323)
Q Consensus 292 e~p~~~~~~i~~fl~~ 307 (323)
++|+++.+.|..|+..
T Consensus 443 d~P~~~~~~i~~fl~~ 458 (462)
T PTZ00472 443 DQPAVALTMINRFLRN 458 (462)
T ss_pred hHHHHHHHHHHHHHcC
Confidence 9999999999999965
No 98
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.65 E-value=8.1e-07 Score=75.56 Aligned_cols=61 Identities=11% Similarity=0.202 Sum_probs=41.9
Q ss_pred ccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHHHh
Q 020663 245 HEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 308 (323)
Q Consensus 245 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 308 (323)
.+.++|+|.+.|++|+++|.+..+-++..-.+.+...++... ....-+.-...+.+||++.
T Consensus 349 rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~~~~~~---~~~gy~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 349 RRCPTPLLAINGEDDPVSPIEDSRLIAESSTDGKALRIPSKP---LHMGYPQALDEIYKWLEDK 409 (411)
T ss_dssp S-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEEE-SSS---HHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcceEEeecCCCCCCCHHHHHHHHhcCCCCceeecCCCc---cccchHHHHHHHHHHHHHh
Confidence 567899999999999999999888888877777888887543 2222346777888888764
No 99
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=98.61 E-value=2.9e-07 Score=73.15 Aligned_cols=36 Identities=17% Similarity=-0.007 Sum_probs=33.3
Q ss_pred ceeEEEEechhhHHHHHHHHhcccccceeeeecCCC
Q 020663 58 VKQWLARHSAGALVAVNSYFEAPERVAALILIAPAI 93 (323)
Q Consensus 58 ~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~ 93 (323)
++++|+|||+||.+++.++..+|+.+.+++.+++..
T Consensus 95 ~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 95 NRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred hheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 589999999999999999999999999999998763
No 100
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.60 E-value=8.1e-07 Score=68.08 Aligned_cols=62 Identities=29% Similarity=0.464 Sum_probs=52.1
Q ss_pred ccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHHHhc
Q 020663 245 HEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAF 309 (323)
Q Consensus 245 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 309 (323)
..+++|.|.|.|+.|.++|.+..+.+++.+++.+++.-| +||+++... ...+.|.+|++...
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~Hp-ggH~VP~~~--~~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSERSEQLAESFKDATVLEHP-GGHIVPNKA--KYKEKIADFIQSFL 221 (230)
T ss_pred cCCCCCeeEEecccceeecchHHHHHHHhcCCCeEEecC-CCccCCCch--HHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999777777 599998665 56677777776554
No 101
>PLN00021 chlorophyllase
Probab=98.60 E-value=7.3e-07 Score=74.69 Aligned_cols=37 Identities=32% Similarity=0.364 Sum_probs=32.5
Q ss_pred CCceeEEEEechhhHHHHHHHHhccc-----ccceeeeecCC
Q 020663 56 NLVKQWLARHSAGALVAVNSYFEAPE-----RVAALILIAPA 92 (323)
Q Consensus 56 ~~~~~~lvGhS~Gg~ia~~~a~~~P~-----~v~~lil~~~~ 92 (323)
+.++++++||||||.+++.+|..+|+ +++++|+++|.
T Consensus 124 d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 124 DLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred ChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 34689999999999999999999875 68999999986
No 102
>PRK10162 acetyl esterase; Provisional
Probab=98.58 E-value=1.5e-06 Score=73.53 Aligned_cols=62 Identities=13% Similarity=0.166 Sum_probs=42.5
Q ss_pred CCCEEEEecCCCCCCCch--HHHHHHhhCCCcEEEEcCCCCCCccc-----cChHHHHHHHHHHHHHhc
Q 020663 248 SCPVLIVTGDTDRIVPSW--NAERLSRAIPGSTFEVIKNCGHVPQE-----EKVEEFVSIVARFLQRAF 309 (323)
Q Consensus 248 ~~Pvl~i~G~~D~~~~~~--~~~~~~~~~~~~~~~~i~~~gH~~~~-----e~p~~~~~~i~~fl~~~~ 309 (323)
-.|+++++|+.|.+.+.. ..+.+.+.--.+++++++|..|.... +...+..+.+.+||++..
T Consensus 248 lPp~~i~~g~~D~L~de~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 248 VPPCFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQL 316 (318)
T ss_pred CCCeEEEecCCCcCcChHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHh
Confidence 359999999999987531 22333333235899999999996432 335567778888887653
No 103
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.52 E-value=3.6e-07 Score=69.95 Aligned_cols=67 Identities=16% Similarity=0.286 Sum_probs=50.3
Q ss_pred hhhccCCCCEEEEecCCCCCCCchHHHHHHhhCC-----CcEEEEcCCCCCCccc-----cCh------HHHHHHHHHHH
Q 020663 242 KRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIP-----GSTFEVIKNCGHVPQE-----EKV------EEFVSIVARFL 305 (323)
Q Consensus 242 ~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~-----e~p------~~~~~~i~~fl 305 (323)
+.+..+++|++++.|+.|..+|++....+.+.+. +.++.++++-||-.+. +.| |+..+.+.+|+
T Consensus 158 ~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf 237 (242)
T KOG3043|consen 158 ADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWF 237 (242)
T ss_pred hHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHH
Confidence 3446778999999999999999998887777764 2468999999996552 223 45666777777
Q ss_pred HHh
Q 020663 306 QRA 308 (323)
Q Consensus 306 ~~~ 308 (323)
+..
T Consensus 238 ~~y 240 (242)
T KOG3043|consen 238 KHY 240 (242)
T ss_pred HHh
Confidence 654
No 104
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.46 E-value=5.5e-07 Score=71.40 Aligned_cols=49 Identities=29% Similarity=0.364 Sum_probs=34.0
Q ss_pred ccCCCCEEEEecCCCCCCCchHHHHHHhhCCC-cEEEEcCCCCCCccccCh
Q 020663 245 HEISCPVLIVTGDTDRIVPSWNAERLSRAIPG-STFEVIKNCGHVPQEEKV 294 (323)
Q Consensus 245 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p 294 (323)
.+|++|++.|+|++|.+++++..+.+.+.+.+ .+++..+ +||.++....
T Consensus 158 ~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~~~ 207 (212)
T PF03959_consen 158 PKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVPRKKE 207 (212)
T ss_dssp TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS----HH
T ss_pred ccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCcCChh
Confidence 56789999999999999999889999998877 7777887 5999876543
No 105
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.46 E-value=1.4e-06 Score=70.31 Aligned_cols=57 Identities=23% Similarity=0.340 Sum_probs=42.9
Q ss_pred CCCEEEEecC------CCCCCCchHHHHHHhhCCC----cEEEEcCC--CCCCccccChHHHHHHHHHHH
Q 020663 248 SCPVLIVTGD------TDRIVPSWNAERLSRAIPG----STFEVIKN--CGHVPQEEKVEEFVSIVARFL 305 (323)
Q Consensus 248 ~~Pvl~i~G~------~D~~~~~~~~~~~~~~~~~----~~~~~i~~--~gH~~~~e~p~~~~~~i~~fl 305 (323)
++.||-|.|. .|-.||...+..+...+.+ .+-.++.| +.|.-..|++ +|.+.|.+||
T Consensus 184 ~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FL 252 (255)
T PF06028_consen 184 NIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFL 252 (255)
T ss_dssp T-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHH
T ss_pred CeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHh
Confidence 4679999998 7889998877777666643 45555654 6898888877 5889999998
No 106
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.44 E-value=3.6e-07 Score=79.16 Aligned_cols=53 Identities=19% Similarity=-0.046 Sum_probs=44.9
Q ss_pred hhhhchHHHHHHHh------CCceeEEEEechhhHHHHHHHHhcccccceeeeecCCCC
Q 020663 42 FRHFGCCTKTMIYL------NLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAIL 94 (323)
Q Consensus 42 ~~~~~dl~~ll~~l------~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~ 94 (323)
...++++.++++.| ++++++||||||||.+|..++..+|++|.++++++|..+
T Consensus 97 ~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 97 KLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 44556677777754 368999999999999999999999999999999999753
No 107
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=98.43 E-value=4e-07 Score=74.22 Aligned_cols=55 Identities=16% Similarity=0.051 Sum_probs=45.4
Q ss_pred cchhhhchHHHH---HHHhCCceeEEEEechhhHHHHHHHHhcccccceeeeecCCCC
Q 020663 40 NSFRHFGCCTKT---MIYLNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAIL 94 (323)
Q Consensus 40 ~~~~~~~dl~~l---l~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~ 94 (323)
+...+++|+..+ +++.+.++++|+||||||.+++.+|.++|++++++|+++|...
T Consensus 78 ~~~~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 78 RWDVWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 344567776664 4555678999999999999999999999999999999998744
No 108
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.40 E-value=5.1e-06 Score=68.53 Aligned_cols=58 Identities=22% Similarity=0.195 Sum_probs=49.7
Q ss_pred ccchhhhchHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccccceeeeecCCCCcc
Q 020663 39 INSFRHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAILAP 96 (323)
Q Consensus 39 ~~~~~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~~~ 96 (323)
.+....|.-+..++-.||.+++.|-|-+||+.|+..+|..+|++|.|+-+--+...++
T Consensus 210 Fn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~~s~ 267 (469)
T KOG2565|consen 210 FNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFVNSP 267 (469)
T ss_pred ccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccccCCc
Confidence 3455677778888889999999999999999999999999999999998877665544
No 109
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.36 E-value=5.3e-06 Score=62.74 Aligned_cols=53 Identities=23% Similarity=0.193 Sum_probs=42.8
Q ss_pred cchhhhchHHHHHHH----hCCceeEEEEechhhHHHHHHHHhccc----ccceeeeecCC
Q 020663 40 NSFRHFGCCTKTMIY----LNLVKQWLARHSAGALVAVNSYFEAPE----RVAALILIAPA 92 (323)
Q Consensus 40 ~~~~~~~dl~~ll~~----l~~~~~~lvGhS~Gg~ia~~~a~~~P~----~v~~lil~~~~ 92 (323)
+++..++|+..++++ .+.++++|||+|+|+-+.-....+.|. +|..++|++|.
T Consensus 46 tP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 46 TPEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred CHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 356677777777766 467899999999999888887777765 79999999986
No 110
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.36 E-value=5.7e-07 Score=74.21 Aligned_cols=51 Identities=24% Similarity=0.100 Sum_probs=41.8
Q ss_pred hhchHHHHHHHh------CCceeEEEEechhhHHHHHHHHhcccccceeeeecCCCC
Q 020663 44 HFGCCTKTMIYL------NLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAIL 94 (323)
Q Consensus 44 ~~~dl~~ll~~l------~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~ 94 (323)
..+++..+++.+ +.++++||||||||.+|..++.++|++|.++++++|...
T Consensus 92 v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 92 VGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred HHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 344555555553 457899999999999999999999999999999998743
No 111
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.35 E-value=2.8e-05 Score=67.32 Aligned_cols=60 Identities=15% Similarity=0.068 Sum_probs=44.7
Q ss_pred CCCccchhhhchHHHHHHHh-----CCceeEEEEechhhHHHHHHHHhcccccceeeeecCCCCc
Q 020663 36 CPSINSFRHFGCCTKTMIYL-----NLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAILA 95 (323)
Q Consensus 36 ~~~~~~~~~~~dl~~ll~~l-----~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~~ 95 (323)
+|.=+..+.......+++.. +..|.+|||.|.||..++.+|+.+|+.+..+|+-+++...
T Consensus 113 ~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsy 177 (581)
T PF11339_consen 113 EPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSY 177 (581)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCccc
Confidence 34444555555555566554 2348999999999999999999999999999888876543
No 112
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.33 E-value=2.6e-06 Score=67.63 Aligned_cols=57 Identities=19% Similarity=0.198 Sum_probs=40.8
Q ss_pred CCccchhhhchHHHHH----HH-----hCCceeEEEEechhhHHHHHHHHhccc----ccceeeeecCCC
Q 020663 37 PSINSFRHFGCCTKTM----IY-----LNLVKQWLARHSAGALVAVNSYFEAPE----RVAALILIAPAI 93 (323)
Q Consensus 37 ~~~~~~~~~~dl~~ll----~~-----l~~~~~~lvGhS~Gg~ia~~~a~~~P~----~v~~lil~~~~~ 93 (323)
|.....+..+|+.+.+ ++ .+.++++|+|+|.||.+++.++....+ .++++++++|..
T Consensus 41 p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 41 PEAPFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp TTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred ccccccccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 4444445555554444 33 234689999999999999999986544 389999999854
No 113
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.31 E-value=2.3e-05 Score=73.67 Aligned_cols=71 Identities=18% Similarity=0.176 Sum_probs=50.0
Q ss_pred hhHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhC----CCcEEEEcCCCCCCc-cccChHHHHHHHHHHHHHhcC
Q 020663 239 PLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAI----PGSTFEVIKNCGHVP-QEEKVEEFVSIVARFLQRAFG 310 (323)
Q Consensus 239 ~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~-~~e~p~~~~~~i~~fl~~~~~ 310 (323)
++...+.+|++|+++|+|.+|..++++...++.+.+ ...++.+.+ .+|.. ....+.++.+.+.+|++....
T Consensus 446 n~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H~~~~~~~~~d~~e~~~~Wfd~~Lk 521 (767)
T PRK05371 446 NYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGHVYPNNWQSIDFRDTMNAWFTHKLL 521 (767)
T ss_pred CHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCccCCCchhHHHHHHHHHHHHHhccc
Confidence 344667889999999999999999876554444443 235565555 58964 333467788888899977653
No 114
>PRK10115 protease 2; Provisional
Probab=98.28 E-value=6.9e-06 Score=76.42 Aligned_cols=53 Identities=15% Similarity=0.118 Sum_probs=41.2
Q ss_pred chhhhchHHHHHHHhC---CceeEEEEechhhHHHHHHHHhcccccceeeeecCCCC
Q 020663 41 SFRHFGCCTKTMIYLN---LVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAIL 94 (323)
Q Consensus 41 ~~~~~~dl~~ll~~l~---~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~ 94 (323)
..|+++.+..+++. | -+++.+.|.|.||+++...+.++|++++++|...|...
T Consensus 505 ~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D 560 (686)
T PRK10115 505 FNDYLDACDALLKL-GYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVD 560 (686)
T ss_pred HHHHHHHHHHHHHc-CCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchh
Confidence 34444444444443 4 36899999999999999999999999999999998743
No 115
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.26 E-value=1.4e-05 Score=62.91 Aligned_cols=59 Identities=22% Similarity=0.318 Sum_probs=52.0
Q ss_pred EEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCC-ccccChHHHHHHHHHHHHHhcC
Q 020663 251 VLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHV-PQEEKVEEFVSIVARFLQRAFG 310 (323)
Q Consensus 251 vl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~-~~~e~p~~~~~~i~~fl~~~~~ 310 (323)
++++.+++|..+|......+.+..|++++..++ +||. .++-+-+.+.+.|.+-|++...
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~k 368 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLDK 368 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHhhhh
Confidence 678889999999998889999999999999998 6996 4677788999999999988763
No 116
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.25 E-value=2e-05 Score=66.73 Aligned_cols=66 Identities=17% Similarity=0.277 Sum_probs=55.5
Q ss_pred hhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCC-cEEEEcCCCCCCccccChHHHHHHHHHHHHHhcC
Q 020663 242 KRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPG-STFEVIKNCGHVPQEEKVEEFVSIVARFLQRAFG 310 (323)
Q Consensus 242 ~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 310 (323)
.-..++++|.++|.|..|.+..+.....+-..+|+ ..+..+||++|..-. ..+.+.|..|+.....
T Consensus 256 ~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~~~ 322 (367)
T PF10142_consen 256 SYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNRIQN 322 (367)
T ss_pred HHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHHHHc
Confidence 33466799999999999999999989988888885 668889999998876 6788889999987643
No 117
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.24 E-value=5e-06 Score=57.47 Aligned_cols=61 Identities=21% Similarity=0.364 Sum_probs=55.7
Q ss_pred CCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHHHh
Q 020663 248 SCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 308 (323)
Q Consensus 248 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 308 (323)
..|+|++.++.|+.+|.+.++.+.+.+++++++.+++.||........-+.+.+.+||..-
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G 94 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDG 94 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHcC
Confidence 5899999999999999999999999999999999999999988766677889999999853
No 118
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.21 E-value=5.8e-06 Score=63.81 Aligned_cols=66 Identities=9% Similarity=0.142 Sum_probs=53.4
Q ss_pred hHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCc--EEEEcCC----CCCCccccCh-HHHHHHHHHHH
Q 020663 240 LAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGS--TFEVIKN----CGHVPQEEKV-EEFVSIVARFL 305 (323)
Q Consensus 240 ~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~--~~~~i~~----~gH~~~~e~p-~~~~~~i~~fl 305 (323)
..+..+.+++|++++...+|+.+|+...+.+.+..+|+ +.+.++. -||+-...+| |.+.+++.+|+
T Consensus 208 ~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 208 YRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred HHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 45667889999999999999999999999999998875 4445544 4999887777 77777777765
No 119
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.19 E-value=1.2e-05 Score=63.34 Aligned_cols=47 Identities=15% Similarity=0.179 Sum_probs=38.5
Q ss_pred HHHHHHHhCC--ceeEEEEechhhHHHHHHHHhcccccceeeeecCCCC
Q 020663 48 CTKTMIYLNL--VKQWLARHSAGALVAVNSYFEAPERVAALILIAPAIL 94 (323)
Q Consensus 48 l~~ll~~l~~--~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~ 94 (323)
+..+..+.++ .++++.|+|.||+++..++..||+.+.++...++...
T Consensus 85 v~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 85 VDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred HHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 3444445555 5899999999999999999999999999998887643
No 120
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.16 E-value=8.7e-06 Score=64.95 Aligned_cols=53 Identities=17% Similarity=0.107 Sum_probs=39.8
Q ss_pred hhchHHHHHHHh-----CCceeEEEEechhhHHHHHHHHhcc---cccceeeeecCCCCcc
Q 020663 44 HFGCCTKTMIYL-----NLVKQWLARHSAGALVAVNSYFEAP---ERVAALILIAPAILAP 96 (323)
Q Consensus 44 ~~~dl~~ll~~l-----~~~~~~lvGhS~Gg~ia~~~a~~~P---~~v~~lil~~~~~~~~ 96 (323)
..+.+..+++.. +.++++||||||||.+|..++...+ +.|+.+|.++++...+
T Consensus 66 ~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 66 LAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred HHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 334455666655 4578999999999999988887543 4799999999875544
No 121
>PRK04940 hypothetical protein; Provisional
Probab=98.16 E-value=0.00015 Score=54.83 Aligned_cols=57 Identities=9% Similarity=0.076 Sum_probs=40.1
Q ss_pred CCCccchhhhchHHHHHHHhC----CceeEEEEechhhHHHHHHHHhcccccceeeeecCCCCc
Q 020663 36 CPSINSFRHFGCCTKTMIYLN----LVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAILA 95 (323)
Q Consensus 36 ~~~~~~~~~~~dl~~ll~~l~----~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~~ 95 (323)
.+...+..-.+.+.++++.+. .+++.|||+|+||+.|..+|.++. -..|+++|.+.+
T Consensus 34 l~~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSSLGGyyA~~La~~~g---~~aVLiNPAv~P 94 (180)
T PRK04940 34 YSTLHPKHDMQHLLKEVDKMLQLSDDERPLICGVGLGGYWAERIGFLCG---IRQVIFNPNLFP 94 (180)
T ss_pred CCCCCHHHHHHHHHHHHHHhhhccCCCCcEEEEeChHHHHHHHHHHHHC---CCEEEECCCCCh
Confidence 333444444455666665421 157899999999999999999986 367889987653
No 122
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.15 E-value=2.5e-05 Score=78.92 Aligned_cols=55 Identities=18% Similarity=-0.020 Sum_probs=46.6
Q ss_pred CccchhhhchHHHHHHHhCC-ceeEEEEechhhHHHHHHHHh---cccccceeeeecCC
Q 020663 38 SINSFRHFGCCTKTMIYLNL-VKQWLARHSAGALVAVNSYFE---APERVAALILIAPA 92 (323)
Q Consensus 38 ~~~~~~~~~dl~~ll~~l~~-~~~~lvGhS~Gg~ia~~~a~~---~P~~v~~lil~~~~ 92 (323)
..+.+++++++.+.++.+.. .+++++||||||.+|..+|.+ .|+++..++++++.
T Consensus 1112 ~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1112 ATSLDEVCEAHLATLLEQQPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred CCCHHHHHHHHHHHHHhhCCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 45677889999888888654 489999999999999999986 57889999999874
No 123
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.13 E-value=3.9e-05 Score=60.80 Aligned_cols=67 Identities=19% Similarity=0.178 Sum_probs=49.3
Q ss_pred hhHhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCC-cEEEEcCCCCCCccccChHHHHHHHHHHHHHh
Q 020663 239 PLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPG-STFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 308 (323)
Q Consensus 239 ~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 308 (323)
|......++++|+|+..|--|+++||...-.+...++. .++.+++.-+|.-. |.-..+.+..|++..
T Consensus 250 D~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~---p~~~~~~~~~~l~~l 317 (321)
T COG3458 250 DIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGG---PGFQSRQQVHFLKIL 317 (321)
T ss_pred hhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccC---cchhHHHHHHHHHhh
Confidence 44456678999999999999999999988778777764 56667776566543 444555677777654
No 124
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.09 E-value=5e-06 Score=72.56 Aligned_cols=51 Identities=18% Similarity=-0.008 Sum_probs=39.8
Q ss_pred hhchHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccc----cceeeeecCCCC
Q 020663 44 HFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPER----VAALILIAPAIL 94 (323)
Q Consensus 44 ~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~----v~~lil~~~~~~ 94 (323)
+.+.+.++.+..+.++++||||||||.++..++..+|+. |+++|.++++..
T Consensus 148 Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 148 LKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred HHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCC
Confidence 333444444556778999999999999999999988874 788899987643
No 125
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.07 E-value=5e-05 Score=71.21 Aligned_cols=69 Identities=22% Similarity=0.300 Sum_probs=51.6
Q ss_pred hhhccCCCCE-EEEecCCCCCCCchHHHHHHhhCC----CcEEEEcCCCCCCccccC-hHHHHHHHHHHHHHhcC
Q 020663 242 KRLHEISCPV-LIVTGDTDRIVPSWNAERLSRAIP----GSTFEVIKNCGHVPQEEK-VEEFVSIVARFLQRAFG 310 (323)
Q Consensus 242 ~~l~~i~~Pv-l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~~~~ 310 (323)
..+..++.|. |++||+.|..+..+....+.+.+. ..+..++|+.+|.+..-. -..+...+..|+..+..
T Consensus 675 ~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~ 749 (755)
T KOG2100|consen 675 SPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFG 749 (755)
T ss_pred chhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcC
Confidence 3345566665 999999999998776666665442 278999999999887644 46788889999986653
No 126
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.04 E-value=1.7e-05 Score=69.53 Aligned_cols=66 Identities=23% Similarity=0.333 Sum_probs=50.3
Q ss_pred hhhccCCCCEEEEecCCCCCCCchHHHHHHhhCC-CcEEEEcCCCCCCccccC---------hHHHHHHHHHHHHH
Q 020663 242 KRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIP-GSTFEVIKNCGHVPQEEK---------VEEFVSIVARFLQR 307 (323)
Q Consensus 242 ~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~---------p~~~~~~i~~fl~~ 307 (323)
+.+-.++.|+|||.|.+|..++++.++++.+.+. ..+++++.+++|.+-.-. .++|...+.++|.+
T Consensus 298 E~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaipk~k~esegltqseVd~~i~~aI~e 373 (784)
T KOG3253|consen 298 EALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKE 373 (784)
T ss_pred hhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCCccccccccccHHHHHHHHHHHHHH
Confidence 4456678999999999999999999999998875 578999999999764332 34555554444443
No 127
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=97.97 E-value=1.3e-05 Score=60.60 Aligned_cols=52 Identities=13% Similarity=0.213 Sum_probs=43.4
Q ss_pred hhhccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccC
Q 020663 242 KRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEK 293 (323)
Q Consensus 242 ~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~ 293 (323)
..+..+++|++++.|++|...--+..+.++.....+++..++|.+|+-.+++
T Consensus 201 ~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 201 WEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIEE 252 (270)
T ss_pred HHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHHH
Confidence 4567889999999999997666677788888888899999999999876654
No 128
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=97.96 E-value=9e-05 Score=65.61 Aligned_cols=61 Identities=11% Similarity=0.002 Sum_probs=53.0
Q ss_pred hhccCCCccchhhhchHHHHHHHhC---CceeEEEEechhhHHHHHHHHhcccccceeeeecCC
Q 020663 32 ICAICPSINSFRHFGCCTKTMIYLN---LVKQWLARHSAGALVAVNSYFEAPERVAALILIAPA 92 (323)
Q Consensus 32 ~~~~~~~~~~~~~~~dl~~ll~~l~---~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~ 92 (323)
+...+..+..+|-++-+.-+.++.| .+++.+-|+|+||.+++....++|+-++..|.-+|+
T Consensus 698 ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapV 761 (867)
T KOG2281|consen 698 IKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPV 761 (867)
T ss_pred HhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcc
Confidence 4566777888999999999999986 478999999999999999999999988888877765
No 129
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.91 E-value=3.3e-05 Score=61.98 Aligned_cols=83 Identities=14% Similarity=0.060 Sum_probs=54.4
Q ss_pred ccchhhccccccccccccchhhhhhccCCCccchhhhchHHH-----HHHHhCC--ceeEEEEechhhHHHHHHHHhccc
Q 020663 9 NFGTVTNMLGRSFFFPFHSNWIIICAICPSINSFRHFGCCTK-----TMIYLNL--VKQWLARHSAGALVAVNSYFEAPE 81 (323)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~-----ll~~l~~--~~~~lvGhS~Gg~ia~~~a~~~P~ 81 (323)
+.+.++-.+-+-.|+.+..-|+.+..+... .+..+...+.+ +.++.++ .+++++|.|+||+-++.++.++|+
T Consensus 214 g~gaiawa~pedqcfVlAPQy~~if~d~e~-~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd 292 (387)
T COG4099 214 GIGAIAWAGPEDQCFVLAPQYNPIFADSEE-KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD 292 (387)
T ss_pred CccceeeecccCceEEEccccccccccccc-ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch
Confidence 344444444444455555556655554443 22223332222 3344455 479999999999999999999999
Q ss_pred ccceeeeecCC
Q 020663 82 RVAALILIAPA 92 (323)
Q Consensus 82 ~v~~lil~~~~ 92 (323)
.+.+.+++++.
T Consensus 293 fFAaa~~iaG~ 303 (387)
T COG4099 293 FFAAAVPIAGG 303 (387)
T ss_pred hhheeeeecCC
Confidence 99999999975
No 130
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.86 E-value=0.00081 Score=59.38 Aligned_cols=60 Identities=28% Similarity=0.431 Sum_probs=46.3
Q ss_pred CCCCEEEEecCCCCCCCchHHHHHHhhC--------------------------CCcEEEEcCCCCCCccccChHHHHHH
Q 020663 247 ISCPVLIVTGDTDRIVPSWNAERLSRAI--------------------------PGSTFEVIKNCGHVPQEEKVEEFVSI 300 (323)
Q Consensus 247 i~~Pvl~i~G~~D~~~~~~~~~~~~~~~--------------------------~~~~~~~i~~~gH~~~~e~p~~~~~~ 300 (323)
-.++||+.+|..|.+++.-..+.+.+.+ .+.+++.|.+|||+++.++|++..+.
T Consensus 329 ~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m 408 (415)
T PF00450_consen 329 NGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQM 408 (415)
T ss_dssp TT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHH
T ss_pred ccceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHH
Confidence 3489999999999999987777776654 13457888999999999999999999
Q ss_pred HHHHHH
Q 020663 301 VARFLQ 306 (323)
Q Consensus 301 i~~fl~ 306 (323)
+..||+
T Consensus 409 ~~~fl~ 414 (415)
T PF00450_consen 409 FRRFLK 414 (415)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 999985
No 131
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.86 E-value=0.00069 Score=56.41 Aligned_cols=62 Identities=21% Similarity=0.314 Sum_probs=42.7
Q ss_pred cCCCCEEEEecCCCCCCCchHHHHHHhhC-----CCcEEEEcCCCCCCccccChHHHHHHHHHHHHHhcC
Q 020663 246 EISCPVLIVTGDTDRIVPSWNAERLSRAI-----PGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAFG 310 (323)
Q Consensus 246 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~-----~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 310 (323)
..++|+++.+|..|.++|....+.+.+.. .+++++.+++.+|....-. -.....+||++...
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~---~~~~a~~Wl~~rf~ 283 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFA---SAPDALAWLDDRFA 283 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhc---CcHHHHHHHHHHHC
Confidence 34789999999999999988776666543 2578888899999754321 11334466665543
No 132
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=97.85 E-value=3.6e-05 Score=66.38 Aligned_cols=36 Identities=33% Similarity=0.373 Sum_probs=27.4
Q ss_pred CCceeEEEEechhhHHHHHHHHhcccccceeeeecCC
Q 020663 56 NLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPA 92 (323)
Q Consensus 56 ~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~ 92 (323)
..+++.++|||+||..++..+... .++++.|++||-
T Consensus 226 D~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~LD~W 261 (379)
T PF03403_consen 226 DLSRIGLAGHSFGGATALQALRQD-TRFKAGILLDPW 261 (379)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHH--TT--EEEEES--
T ss_pred chhheeeeecCchHHHHHHHHhhc-cCcceEEEeCCc
Confidence 356899999999999999988765 689999999974
No 133
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.81 E-value=0.00039 Score=54.81 Aligned_cols=52 Identities=17% Similarity=0.033 Sum_probs=37.5
Q ss_pred chhhhchHHHHH-HHhCCceeEEEEechhhHHHHHHHHh---cccccceeeeecCC
Q 020663 41 SFRHFGCCTKTM-IYLNLVKQWLARHSAGALVAVNSYFE---APERVAALILIAPA 92 (323)
Q Consensus 41 ~~~~~~dl~~ll-~~l~~~~~~lvGhS~Gg~ia~~~a~~---~P~~v~~lil~~~~ 92 (323)
...+++.+...+ +..+..+++++|||+||.++...+.. .++.+.+++++++.
T Consensus 46 ~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 46 ADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTY 101 (212)
T ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccC
Confidence 344444443333 33446789999999999999998886 35678999988865
No 134
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=97.81 E-value=0.00017 Score=65.87 Aligned_cols=52 Identities=8% Similarity=-0.128 Sum_probs=44.7
Q ss_pred hhhhchHHHHHHHhCC-----ceeEEEEechhhHHHHHHHHhcccccceeeeecCCC
Q 020663 42 FRHFGCCTKTMIYLNL-----VKQWLARHSAGALVAVNSYFEAPERVAALILIAPAI 93 (323)
Q Consensus 42 ~~~~~dl~~ll~~l~~-----~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~ 93 (323)
...++|+.++++.+.. .++.++|||+||.+++.+|..+|++++++|..++..
T Consensus 76 ~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 76 SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCccc
Confidence 4677888888887632 489999999999999999999999999999988763
No 135
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=97.78 E-value=0.00069 Score=57.04 Aligned_cols=56 Identities=21% Similarity=0.179 Sum_probs=40.7
Q ss_pred chhhhchHHHHHHH----h--CCceeEEEEechhhHHHHHHHHhc------ccccceeeeecCCCCcc
Q 020663 41 SFRHFGCCTKTMIY----L--NLVKQWLARHSAGALVAVNSYFEA------PERVAALILIAPAILAP 96 (323)
Q Consensus 41 ~~~~~~dl~~ll~~----l--~~~~~~lvGhS~Gg~ia~~~a~~~------P~~v~~lil~~~~~~~~ 96 (323)
.+|-.+.+..+.++ . +.+++.|.|-|-||.+|..+|.+. +-++++.|++-|.....
T Consensus 143 y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 143 YDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGT 210 (336)
T ss_pred chHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCC
Confidence 33444445555553 2 346899999999999999988752 35799999999986544
No 136
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.77 E-value=0.00028 Score=55.35 Aligned_cols=61 Identities=15% Similarity=0.156 Sum_probs=49.7
Q ss_pred hccCCCCEEEEecCCCCCCCchHHHHHHhhCCC--cEEEEcCCCCCCccccChHHHHHHHHHHH
Q 020663 244 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPG--STFEVIKNCGHVPQEEKVEEFVSIVARFL 305 (323)
Q Consensus 244 l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 305 (323)
..+-.+-+.+.+|..|..+|.+..+.+++.+|. .++-+ +++-|.+.....+..+..+.+.+
T Consensus 238 ~een~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 238 CEENLDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred HHhcCcEEEEEccCCCCCcchHHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhh
Confidence 344456788999999999999999999999985 44444 78999998888888888887765
No 137
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.74 E-value=0.00032 Score=61.28 Aligned_cols=49 Identities=16% Similarity=0.106 Sum_probs=40.2
Q ss_pred hhchHHHHHHHh-C----CceeEEEEechhhHHHHHHHHhcccccceeeeecCC
Q 020663 44 HFGCCTKTMIYL-N----LVKQWLARHSAGALVAVNSYFEAPERVAALILIAPA 92 (323)
Q Consensus 44 ~~~dl~~ll~~l-~----~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~ 92 (323)
++++|.-++++. + -++.+|.|+||||..|+.++.++|+.+.+++.+++.
T Consensus 269 l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 269 VQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 445566666653 2 246889999999999999999999999999999986
No 138
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.71 E-value=0.0004 Score=53.46 Aligned_cols=55 Identities=18% Similarity=0.086 Sum_probs=44.9
Q ss_pred cchhhhchHHHHHHHhCC----ceeEEEEechhhHHHHHHHH--hcccccceeeeecCCCC
Q 020663 40 NSFRHFGCCTKTMIYLNL----VKQWLARHSAGALVAVNSYF--EAPERVAALILIAPAIL 94 (323)
Q Consensus 40 ~~~~~~~dl~~ll~~l~~----~~~~lvGhS~Gg~ia~~~a~--~~P~~v~~lil~~~~~~ 94 (323)
+..+.++|+..++++++. .+++|+|||.|+.=.+.|.. ..|..|++.|+.+|+..
T Consensus 85 slk~D~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 85 SLKDDVEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred cccccHHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 355778899999998864 38999999999999988884 35778999999998744
No 139
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=97.67 E-value=0.0011 Score=54.92 Aligned_cols=51 Identities=12% Similarity=-0.055 Sum_probs=37.7
Q ss_pred hhhchHHHHH---HHhCC--ceeEEEEechhhHHHHHHHHhcccccceeeeecCCC
Q 020663 43 RHFGCCTKTM---IYLNL--VKQWLARHSAGALVAVNSYFEAPERVAALILIAPAI 93 (323)
Q Consensus 43 ~~~~dl~~ll---~~l~~--~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~ 93 (323)
.-.+|..++| ....+ .+|-++|.|++|..++.+|...|..+++++...+..
T Consensus 81 ~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~ 136 (272)
T PF02129_consen 81 NEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWS 136 (272)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-S
T ss_pred hHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCC
Confidence 3444444444 44444 489999999999999999998888999999988753
No 140
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=97.49 E-value=0.0019 Score=54.67 Aligned_cols=38 Identities=29% Similarity=0.278 Sum_probs=31.3
Q ss_pred CceeEEEEechhhHHHHHHHHhccc----ccceeeeecCCCC
Q 020663 57 LVKQWLARHSAGALVAVNSYFEAPE----RVAALILIAPAIL 94 (323)
Q Consensus 57 ~~~~~lvGhS~Gg~ia~~~a~~~P~----~v~~lil~~~~~~ 94 (323)
.+++.+.|+|-||.+++.++..-.+ ...+.+++.|...
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d 192 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLD 192 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccC
Confidence 3679999999999999999987544 4788888888744
No 141
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.47 E-value=0.00018 Score=58.84 Aligned_cols=51 Identities=18% Similarity=0.083 Sum_probs=41.6
Q ss_pred hhhchHHHHHHH-hCCce--eEEEEechhhHHHHHHHHhcccccceeeeecCCC
Q 020663 43 RHFGCCTKTMIY-LNLVK--QWLARHSAGALVAVNSYFEAPERVAALILIAPAI 93 (323)
Q Consensus 43 ~~~~dl~~ll~~-l~~~~--~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~ 93 (323)
.+.++|..+++. +++.+ ..|.|+||||..|+.++.+||+.+.+++.++|..
T Consensus 97 ~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~ 150 (251)
T PF00756_consen 97 FLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGAL 150 (251)
T ss_dssp HHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEES
T ss_pred ehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccc
Confidence 355667777665 44432 6899999999999999999999999999999763
No 142
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.44 E-value=0.00095 Score=51.17 Aligned_cols=50 Identities=12% Similarity=0.130 Sum_probs=38.0
Q ss_pred hhhchHHHHHHHh---CC--ceeEEEEechhhHHHHHHHHhcccccceeeeecCC
Q 020663 43 RHFGCCTKTMIYL---NL--VKQWLARHSAGALVAVNSYFEAPERVAALILIAPA 92 (323)
Q Consensus 43 ~~~~dl~~ll~~l---~~--~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~ 92 (323)
..++.+..++++. |+ .++.+-|.|+||.+++..+..+|..+.+++...+.
T Consensus 73 ~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~ 127 (206)
T KOG2112|consen 73 RAADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGF 127 (206)
T ss_pred HHHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccc
Confidence 3444456666653 43 57889999999999999999998888888776654
No 143
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.42 E-value=0.0014 Score=52.02 Aligned_cols=38 Identities=32% Similarity=0.275 Sum_probs=32.4
Q ss_pred CceeEEEEechhhHHHHHHHHhcc-c-ccceeeeecCCCC
Q 020663 57 LVKQWLARHSAGALVAVNSYFEAP-E-RVAALILIAPAIL 94 (323)
Q Consensus 57 ~~~~~lvGhS~Gg~ia~~~a~~~P-~-~v~~lil~~~~~~ 94 (323)
+.++.++|||.||-.|..+|..+- + .+.+||.++|+..
T Consensus 119 l~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 119 LSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred cceEEEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 468999999999999999999773 2 5999999998743
No 144
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.41 E-value=0.0055 Score=49.68 Aligned_cols=60 Identities=18% Similarity=0.329 Sum_probs=48.9
Q ss_pred cCCCCEEEEecCCCCCCCchHHHHHHhhCC----CcEEEEcCCCCCCcccc-ChHHHHHHHHHHH
Q 020663 246 EISCPVLIVTGDTDRIVPSWNAERLSRAIP----GSTFEVIKNCGHVPQEE-KVEEFVSIVARFL 305 (323)
Q Consensus 246 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl 305 (323)
...+|-++++++.|.+++.+..++..+... .++...+++++|..|+. +|++..+.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 446899999999999999887776666542 37778889999988765 5999999999884
No 145
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=97.41 E-value=0.0045 Score=48.77 Aligned_cols=50 Identities=18% Similarity=0.231 Sum_probs=34.8
Q ss_pred HhhhccCCCCEEEEecCCCCCCCchHHHHHHhhCC--CcEEEEcCCCCCCcc
Q 020663 241 AKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIP--GSTFEVIKNCGHVPQ 290 (323)
Q Consensus 241 ~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~ 290 (323)
...++.+++|++.+++++|.++......++...+. .++++.++|++|-+.
T Consensus 188 ~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 188 INDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG 239 (294)
T ss_dssp HHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT
T ss_pred HHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhh
Confidence 35677889999999999999999888888887653 578899999999876
No 146
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.37 E-value=0.00038 Score=52.14 Aligned_cols=37 Identities=19% Similarity=0.189 Sum_probs=30.7
Q ss_pred CCceeEEEEechhhHHHHHHHHhccc----ccceeeeecCC
Q 020663 56 NLVKQWLARHSAGALVAVNSYFEAPE----RVAALILIAPA 92 (323)
Q Consensus 56 ~~~~~~lvGhS~Gg~ia~~~a~~~P~----~v~~lil~~~~ 92 (323)
...+++++|||+||.+|..++...+. .+..++..+++
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p 66 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPP 66 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCC
Confidence 56799999999999999999988765 56677777765
No 147
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.27 E-value=0.00048 Score=59.89 Aligned_cols=52 Identities=25% Similarity=0.137 Sum_probs=41.3
Q ss_pred hhhchHHHHHHHh---CCceeEEEEechhhHHHHHHHHhccc------ccceeeeecCCCC
Q 020663 43 RHFGCCTKTMIYL---NLVKQWLARHSAGALVAVNSYFEAPE------RVAALILIAPAIL 94 (323)
Q Consensus 43 ~~~~dl~~ll~~l---~~~~~~lvGhS~Gg~ia~~~a~~~P~------~v~~lil~~~~~~ 94 (323)
.+...|..+++.. ..+|++||||||||.++..+....+. .|+++|.++++..
T Consensus 101 ~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 5556666666653 35799999999999999999988743 5999999998754
No 148
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.25 E-value=0.0027 Score=49.68 Aligned_cols=38 Identities=18% Similarity=0.143 Sum_probs=29.9
Q ss_pred CCceeEEEEechhhHHHHHHHHhcccccceeeeecCCCCc
Q 020663 56 NLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAILA 95 (323)
Q Consensus 56 ~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~~ 95 (323)
+.+++.|||+|||-.+|..+....| +...|.+++...+
T Consensus 55 ~y~~i~lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~~P 92 (213)
T PF04301_consen 55 GYREIYLVAWSMGVWAANRVLQGIP--FKRAIAINGTPYP 92 (213)
T ss_pred cCceEEEEEEeHHHHHHHHHhccCC--cceeEEEECCCCC
Confidence 4589999999999999988766554 6777888876543
No 149
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.17 E-value=0.00086 Score=49.30 Aligned_cols=37 Identities=11% Similarity=0.006 Sum_probs=29.5
Q ss_pred hhhchHHHHHHHhCCceeEEEEechhhHHHHHHHHhc
Q 020663 43 RHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEA 79 (323)
Q Consensus 43 ~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 79 (323)
...+.+..+++..+..++++.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 4456667766666667899999999999999988864
No 150
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.17 E-value=0.00078 Score=56.99 Aligned_cols=38 Identities=24% Similarity=0.066 Sum_probs=32.1
Q ss_pred CceeEEEEechhhHHHHHHHHhccc--ccceeeeecCCCC
Q 020663 57 LVKQWLARHSAGALVAVNSYFEAPE--RVAALILIAPAIL 94 (323)
Q Consensus 57 ~~~~~lvGhS~Gg~ia~~~a~~~P~--~v~~lil~~~~~~ 94 (323)
.++++|||||+||.+|-.++..... +|..++.++|..+
T Consensus 149 ~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 149 PENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred hhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 4789999999999999999998877 8999999999754
No 151
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.11 E-value=0.01 Score=49.85 Aligned_cols=44 Identities=25% Similarity=0.101 Sum_probs=36.0
Q ss_pred HHHHHHhCCceeEEEEechhhHHHHHHHHhccc-ccceeeeecCC
Q 020663 49 TKTMIYLNLVKQWLARHSAGALVAVNSYFEAPE-RVAALILIAPA 92 (323)
Q Consensus 49 ~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~-~v~~lil~~~~ 92 (323)
.+++...+..+++||||+.|+..+..+....+. .++++|++++-
T Consensus 184 ~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 184 IAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAY 228 (310)
T ss_pred HHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCC
Confidence 334444566779999999999999999998765 59999999975
No 152
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.10 E-value=0.0013 Score=53.16 Aligned_cols=58 Identities=19% Similarity=0.005 Sum_probs=44.6
Q ss_pred CCccchhhhchHHHHHHHh-CCceeEEEEechhhHHHHHHHHhc---ccccceeeeecCCCC
Q 020663 37 PSINSFRHFGCCTKTMIYL-NLVKQWLARHSAGALVAVNSYFEA---PERVAALILIAPAIL 94 (323)
Q Consensus 37 ~~~~~~~~~~dl~~ll~~l-~~~~~~lvGhS~Gg~ia~~~a~~~---P~~v~~lil~~~~~~ 94 (323)
+..+.+++++...+-|... .-.+++|+|||+||.+|...|.+- -+.|..++++++...
T Consensus 43 ~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 43 PFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 3444667777766555555 346899999999999999999863 347999999998755
No 153
>PLN02606 palmitoyl-protein thioesterase
Probab=97.05 E-value=0.055 Score=44.63 Aligned_cols=47 Identities=13% Similarity=-0.006 Sum_probs=37.0
Q ss_pred chHHHHHHHhCC-----ceeEEEEechhhHHHHHHHHhccc--ccceeeeecCC
Q 020663 46 GCCTKTMIYLNL-----VKQWLARHSAGALVAVNSYFEAPE--RVAALILIAPA 92 (323)
Q Consensus 46 ~dl~~ll~~l~~-----~~~~lvGhS~Gg~ia~~~a~~~P~--~v~~lil~~~~ 92 (323)
+.+..+.+++.. +-+++||+|.||.++-.++.+.|+ .|+.+|.++++
T Consensus 78 ~Qv~~vce~l~~~~~L~~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 78 QQASIACEKIKQMKELSEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred HHHHHHHHHHhcchhhcCceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 445555555432 358999999999999999999987 49999999975
No 154
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.95 E-value=0.0017 Score=51.70 Aligned_cols=49 Identities=14% Similarity=0.125 Sum_probs=36.9
Q ss_pred HHHHHHHhCCceeEEEEechhhHHHHHHHHhc----ccccceeeeecCCCCcch
Q 020663 48 CTKTMIYLNLVKQWLARHSAGALVAVNSYFEA----PERVAALILIAPAILAPR 97 (323)
Q Consensus 48 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~----P~~v~~lil~~~~~~~~~ 97 (323)
+..+++..+ +++++.|||.||.+|...|... .++|.++...+++...+.
T Consensus 75 l~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~~~ 127 (224)
T PF11187_consen 75 LKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFSEE 127 (224)
T ss_pred HHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCChh
Confidence 444444444 3599999999999999999873 457899999998766543
No 155
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.93 E-value=0.014 Score=48.13 Aligned_cols=47 Identities=17% Similarity=-0.025 Sum_probs=36.9
Q ss_pred chHHHHHHHhCC-----ceeEEEEechhhHHHHHHHHhccc--ccceeeeecCC
Q 020663 46 GCCTKTMIYLNL-----VKQWLARHSAGALVAVNSYFEAPE--RVAALILIAPA 92 (323)
Q Consensus 46 ~dl~~ll~~l~~-----~~~~lvGhS~Gg~ia~~~a~~~P~--~v~~lil~~~~ 92 (323)
+.+..+.+++.. +-+++||+|.||.++-.++.+.|+ .|+.+|.++++
T Consensus 77 ~Qve~vce~l~~~~~l~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 77 QQAEIACEKVKQMKELSQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred HHHHHHHHHHhhchhhhCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 444445444432 348999999999999999999987 59999999975
No 156
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=96.91 E-value=0.002 Score=51.79 Aligned_cols=50 Identities=22% Similarity=0.244 Sum_probs=36.1
Q ss_pred hchHHHHHHHh----CCceeEEEEechhhHHHHHHHHh----cc-----cccceeeeecCCCC
Q 020663 45 FGCCTKTMIYL----NLVKQWLARHSAGALVAVNSYFE----AP-----ERVAALILIAPAIL 94 (323)
Q Consensus 45 ~~dl~~ll~~l----~~~~~~lvGhS~Gg~ia~~~a~~----~P-----~~v~~lil~~~~~~ 94 (323)
..++..+++.| +.++++|++||||+.+.+..... .+ .++..+|+.+|-+.
T Consensus 76 ~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 76 GPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred HHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 33455555543 57899999999999999887653 22 36889999997643
No 157
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=96.79 E-value=0.0039 Score=50.84 Aligned_cols=44 Identities=14% Similarity=0.052 Sum_probs=33.4
Q ss_pred hHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccccceeeeecC
Q 020663 47 CCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAP 91 (323)
Q Consensus 47 dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~ 91 (323)
|+..+-..+.-.++.++|||+||+.+....+.+- .++..|+++.
T Consensus 230 ~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~ 273 (399)
T KOG3847|consen 230 DLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDA 273 (399)
T ss_pred cHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeee
Confidence 4455555555568999999999999998877654 5888888885
No 158
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.77 E-value=0.0019 Score=55.08 Aligned_cols=52 Identities=19% Similarity=0.144 Sum_probs=43.5
Q ss_pred chhhhchHHHHHHHhCCceeEEEEechhhHHHHHHHHhcc--cccceeeeecCC
Q 020663 41 SFRHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAP--ERVAALILIAPA 92 (323)
Q Consensus 41 ~~~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P--~~v~~lil~~~~ 92 (323)
.+.+.+-+.+++...+.+++.|+||||||.....++..++ .+|+.++.++++
T Consensus 110 ~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 110 GEQLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccC
Confidence 3344555666667778899999999999999999999988 899999999976
No 159
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.74 E-value=0.0019 Score=51.79 Aligned_cols=48 Identities=19% Similarity=0.225 Sum_probs=39.0
Q ss_pred chHHHHHHH-h--CCceeEEEEechhhHHHHHHHHhcccccceeeeecCCC
Q 020663 46 GCCTKTMIY-L--NLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAI 93 (323)
Q Consensus 46 ~dl~~ll~~-l--~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~ 93 (323)
+++.-++++ . +-++-.|+|||+||.+++.....+|+.+...++++|..
T Consensus 122 ~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 122 EQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred HhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 344455555 2 34568899999999999999999999999999999864
No 160
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=96.74 E-value=0.0014 Score=55.48 Aligned_cols=34 Identities=15% Similarity=-0.093 Sum_probs=26.6
Q ss_pred ceeEEEEechhhHHHHHHHHhcccccceeeeecCC
Q 020663 58 VKQWLARHSAGALVAVNSYFEAPERVAALILIAPA 92 (323)
Q Consensus 58 ~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~ 92 (323)
+++.++|+||||..++.+|+.- ++|++.|..+-.
T Consensus 226 ~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~l 259 (390)
T PF12715_consen 226 DRIGCMGFSMGGYRAWWLAALD-DRIKATVANGYL 259 (390)
T ss_dssp EEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-B
T ss_pred cceEEEeecccHHHHHHHHHcc-hhhHhHhhhhhh
Confidence 6899999999999999999876 589888887754
No 161
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=96.70 E-value=0.004 Score=49.24 Aligned_cols=34 Identities=18% Similarity=0.080 Sum_probs=24.4
Q ss_pred hhchHHHHHHHhCCceeEEEEechhhHHHHHHHHh
Q 020663 44 HFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFE 78 (323)
Q Consensus 44 ~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~ 78 (323)
+.+-|..+++.-|. |+.||||||||.++-.+...
T Consensus 62 l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 62 LRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp HHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHH
Confidence 34445555556688 99999999999999988764
No 162
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=96.61 E-value=0.00094 Score=55.96 Aligned_cols=56 Identities=23% Similarity=0.355 Sum_probs=43.9
Q ss_pred hhhccCCCCEEEEecCCCCCCCch-HHHHHHhhCCCc--EEEEcCCCCCCccccChHHH
Q 020663 242 KRLHEISCPVLIVTGDTDRIVPSW-NAERLSRAIPGS--TFEVIKNCGHVPQEEKVEEF 297 (323)
Q Consensus 242 ~~l~~i~~Pvl~i~G~~D~~~~~~-~~~~~~~~~~~~--~~~~i~~~gH~~~~e~p~~~ 297 (323)
..+.+++.|++++.|..|.+.|.. ........+++. .+..++++.|+-+.+-+++.
T Consensus 245 tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 245 TGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred ccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 557889999999999999977654 334555566765 67889999999998887764
No 163
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.49 E-value=0.0044 Score=49.87 Aligned_cols=38 Identities=18% Similarity=0.152 Sum_probs=27.4
Q ss_pred CCceeEEEEechhhHHHHHHHHhcc-----cccceeeeecCCC
Q 020663 56 NLVKQWLARHSAGALVAVNSYFEAP-----ERVAALILIAPAI 93 (323)
Q Consensus 56 ~~~~~~lvGhS~Gg~ia~~~a~~~P-----~~v~~lil~~~~~ 93 (323)
...++++.|||+||.+|..++.... ..+..+++-+|.+
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 4568999999999999999888643 3455555555543
No 164
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=96.43 E-value=0.0039 Score=49.61 Aligned_cols=35 Identities=20% Similarity=0.039 Sum_probs=25.1
Q ss_pred hhhchHHHHHHHhCC--ceeEEEEechhhHHHHHHHH
Q 020663 43 RHFGCCTKTMIYLNL--VKQWLARHSAGALVAVNSYF 77 (323)
Q Consensus 43 ~~~~dl~~ll~~l~~--~~~~lvGhS~Gg~ia~~~a~ 77 (323)
.+++.|.+.++.... .++++|||||||.++-.+..
T Consensus 61 rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 61 RLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 455555555555554 48999999999999876554
No 165
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=96.39 E-value=0.011 Score=49.30 Aligned_cols=68 Identities=29% Similarity=0.448 Sum_probs=53.2
Q ss_pred HhhhccCC-CCEEEEecCCCCCCCchHHHHHHhhCCC--cEEEEcCCCCCCccccChH---HHHHHHHHHHHHh
Q 020663 241 AKRLHEIS-CPVLIVTGDTDRIVPSWNAERLSRAIPG--STFEVIKNCGHVPQEEKVE---EFVSIVARFLQRA 308 (323)
Q Consensus 241 ~~~l~~i~-~Pvl~i~G~~D~~~~~~~~~~~~~~~~~--~~~~~i~~~gH~~~~e~p~---~~~~~i~~fl~~~ 308 (323)
...+.++. +|+++++|.+|..+|......+.+.... .+...+++++|........ +....+.+|+.+.
T Consensus 224 ~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 224 FDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 34455565 7999999999999999888877776654 5777888999988764433 7888899998765
No 166
>COG0627 Predicted esterase [General function prediction only]
Probab=96.36 E-value=0.0042 Score=52.04 Aligned_cols=38 Identities=18% Similarity=0.240 Sum_probs=34.4
Q ss_pred eeEEEEechhhHHHHHHHHhcccccceeeeecCCCCcc
Q 020663 59 KQWLARHSAGALVAVNSYFEAPERVAALILIAPAILAP 96 (323)
Q Consensus 59 ~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~~~ 96 (323)
+-.++||||||.=|+.+|..+|+++..+...+|.....
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 67899999999999999999999999999999876543
No 167
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=96.33 E-value=0.0056 Score=48.43 Aligned_cols=52 Identities=19% Similarity=0.122 Sum_probs=39.8
Q ss_pred hhhchHHHHHH----HhCCceeEEEEechhhHHHHHHHHhccc-----ccceeeeecCCCC
Q 020663 43 RHFGCCTKTMI----YLNLVKQWLARHSAGALVAVNSYFEAPE-----RVAALILIAPAIL 94 (323)
Q Consensus 43 ~~~~dl~~ll~----~l~~~~~~lvGhS~Gg~ia~~~a~~~P~-----~v~~lil~~~~~~ 94 (323)
++...+..++. +.+++++.+|||||||.-...|+..+-. .++.+|.++++..
T Consensus 117 ~~s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 117 DQSKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred hHHHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 44444555554 4578999999999999999999987533 4899999998654
No 168
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=96.31 E-value=0.0044 Score=49.95 Aligned_cols=37 Identities=38% Similarity=0.390 Sum_probs=33.2
Q ss_pred CceeEEEEechhhHHHHHHHHhc-----ccccceeeeecCCC
Q 020663 57 LVKQWLARHSAGALVAVNSYFEA-----PERVAALILIAPAI 93 (323)
Q Consensus 57 ~~~~~lvGhS~Gg~ia~~~a~~~-----P~~v~~lil~~~~~ 93 (323)
..++.|.|||-||-+|..++..+ +.+++++++++|+-
T Consensus 90 ~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 90 FSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred ccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 45899999999999999999987 56899999999984
No 169
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.22 E-value=0.01 Score=45.15 Aligned_cols=53 Identities=15% Similarity=0.061 Sum_probs=41.8
Q ss_pred hhhchHHHHHHHhCC-----ceeEEEEechhhHHHHHHHHhcccccceeeeecCCCCc
Q 020663 43 RHFGCCTKTMIYLNL-----VKQWLARHSAGALVAVNSYFEAPERVAALILIAPAILA 95 (323)
Q Consensus 43 ~~~~dl~~ll~~l~~-----~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~~ 95 (323)
.-+.+|..|++.|.. .++.++|||+|+.++-..+...+..+..+|+++++...
T Consensus 89 ~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 89 AGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMG 146 (177)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCC
Confidence 455567777777642 36889999999999999888767789999999976543
No 170
>PLN00413 triacylglycerol lipase
Probab=96.16 E-value=0.011 Score=51.63 Aligned_cols=35 Identities=17% Similarity=-0.002 Sum_probs=29.0
Q ss_pred hhhchHHHHHHHhCCceeEEEEechhhHHHHHHHH
Q 020663 43 RHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYF 77 (323)
Q Consensus 43 ~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~ 77 (323)
+..+.+..+++...-.++++.|||+||.+|..+|.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 45566777777777678999999999999999885
No 171
>PLN02162 triacylglycerol lipase
Probab=96.08 E-value=0.012 Score=51.25 Aligned_cols=33 Identities=18% Similarity=0.001 Sum_probs=25.1
Q ss_pred hchHHHHHHHhCCceeEEEEechhhHHHHHHHH
Q 020663 45 FGCCTKTMIYLNLVKQWLARHSAGALVAVNSYF 77 (323)
Q Consensus 45 ~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~ 77 (323)
.+++.+++.+..-.++++.|||+||.+|..+|.
T Consensus 265 ~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 265 RQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 344555555555568999999999999998765
No 172
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.08 E-value=0.011 Score=54.29 Aligned_cols=38 Identities=26% Similarity=0.323 Sum_probs=28.1
Q ss_pred eeEEEEechhhHHHHHHHHh---cccccceeeeecCCCCcc
Q 020663 59 KQWLARHSAGALVAVNSYFE---APERVAALILIAPAILAP 96 (323)
Q Consensus 59 ~~~lvGhS~Gg~ia~~~a~~---~P~~v~~lil~~~~~~~~ 96 (323)
.++||||||||.+|...+.. .++.|.-++..+++-..+
T Consensus 183 sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a~ 223 (973)
T KOG3724|consen 183 SVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAAP 223 (973)
T ss_pred eEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccCC
Confidence 48999999999999887753 345677777777654333
No 173
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=96.02 E-value=0.014 Score=48.38 Aligned_cols=40 Identities=23% Similarity=0.184 Sum_probs=34.0
Q ss_pred HHHhCC--ceeEEEEechhhHHHHHHHHhcccccceeeeecCC
Q 020663 52 MIYLNL--VKQWLARHSAGALVAVNSYFEAPERVAALILIAPA 92 (323)
Q Consensus 52 l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~ 92 (323)
+..||. +.++|.|+|.||.-+..+|..||+ |+++|+-++.
T Consensus 303 I~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 303 IQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred HHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 445664 679999999999999999999997 8999987764
No 174
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=95.98 E-value=0.01 Score=53.13 Aligned_cols=53 Identities=17% Similarity=0.187 Sum_probs=38.4
Q ss_pred hhhchHHHHHHHh----CCceeEEEEechhhHHHHHHHHhc-----------c----cccceeeeecCCCCc
Q 020663 43 RHFGCCTKTMIYL----NLVKQWLARHSAGALVAVNSYFEA-----------P----ERVAALILIAPAILA 95 (323)
Q Consensus 43 ~~~~dl~~ll~~l----~~~~~~lvGhS~Gg~ia~~~a~~~-----------P----~~v~~lil~~~~~~~ 95 (323)
.+...+..+++.. +-+|++||||||||.+++.+...- + ..|++.|.++++...
T Consensus 194 ~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 194 QTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred HHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 4445566666543 358999999999999999987632 1 258999999987543
No 175
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.94 E-value=0.015 Score=48.74 Aligned_cols=48 Identities=25% Similarity=0.474 Sum_probs=35.7
Q ss_pred chHHHHHHHh----CCceeEEEEechhhHHHHHHHHh--------cccccceeeeecCCC
Q 020663 46 GCCTKTMIYL----NLVKQWLARHSAGALVAVNSYFE--------APERVAALILIAPAI 93 (323)
Q Consensus 46 ~dl~~ll~~l----~~~~~~lvGhS~Gg~ia~~~a~~--------~P~~v~~lil~~~~~ 93 (323)
.+++.+++.| +.++++|++||||..+++....+ -+.+++-+|+-+|-+
T Consensus 175 ~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 175 PALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred HHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 3455555554 57889999999999999887654 245688888888753
No 176
>KOG3101 consensus Esterase D [General function prediction only]
Probab=95.94 E-value=0.008 Score=46.18 Aligned_cols=37 Identities=24% Similarity=0.335 Sum_probs=33.0
Q ss_pred ceeEEEEechhhHHHHHHHHhcccccceeeeecCCCC
Q 020663 58 VKQWLARHSAGALVAVNSYFEAPERVAALILIAPAIL 94 (323)
Q Consensus 58 ~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~ 94 (323)
.++.|.||||||.=|+..+.+.|.+.+++-..+|.+.
T Consensus 141 ~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 141 LKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICN 177 (283)
T ss_pred hhcceeccccCCCceEEEEEcCcccccceeccccccC
Confidence 5788999999999999999999999999888887654
No 177
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=95.84 E-value=0.09 Score=47.69 Aligned_cols=54 Identities=15% Similarity=0.022 Sum_probs=42.5
Q ss_pred chhhhchHHHHHHHh-C-CceeEEEEechhhHHHHHHHHhcccccceeeeecCCCC
Q 020663 41 SFRHFGCCTKTMIYL-N-LVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAIL 94 (323)
Q Consensus 41 ~~~~~~dl~~ll~~l-~-~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~ 94 (323)
..|+++....|++.- + -+.++++|-|.||++.-..+.+.|+.++++|+--|.+.
T Consensus 508 f~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 508 FTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred HHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccc
Confidence 445666666665542 2 25799999999999999999999999999999888654
No 178
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.76 E-value=0.019 Score=46.77 Aligned_cols=51 Identities=18% Similarity=0.195 Sum_probs=41.0
Q ss_pred hhhchHHHHHHH----hCCc--eeEEEEechhhHHHHHHHHhcccccceeeeecCCC
Q 020663 43 RHFGCCTKTMIY----LNLV--KQWLARHSAGALVAVNSYFEAPERVAALILIAPAI 93 (323)
Q Consensus 43 ~~~~dl~~ll~~----l~~~--~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~ 93 (323)
+-+..|.+++++ .+++ ++++.|.|-||.++..+++.+|+.+.++..+++..
T Consensus 123 ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 123 DDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 334444454444 4665 89999999999999999999999999999999764
No 179
>COG3150 Predicted esterase [General function prediction only]
Probab=95.71 E-value=0.021 Score=42.30 Aligned_cols=54 Identities=17% Similarity=0.123 Sum_probs=43.7
Q ss_pred CccchhhhchHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccccceeeeecCCCC
Q 020663 38 SINSFRHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAIL 94 (323)
Q Consensus 38 ~~~~~~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~ 94 (323)
...+...++.+..++..++.+...|+|-|+||+.|..++.++- +++ |+++|...
T Consensus 39 ~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~G--ira-v~~NPav~ 92 (191)
T COG3150 39 PHDPQQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLCG--IRA-VVFNPAVR 92 (191)
T ss_pred CCCHHHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHhC--Chh-hhcCCCcC
Confidence 3446678888999999999888999999999999999999875 444 55677654
No 180
>PLN02571 triacylglycerol lipase
Probab=95.70 E-value=0.013 Score=50.60 Aligned_cols=36 Identities=14% Similarity=0.052 Sum_probs=26.8
Q ss_pred hhhchHHHHHHHhCCc--eeEEEEechhhHHHHHHHHh
Q 020663 43 RHFGCCTKTMIYLNLV--KQWLARHSAGALVAVNSYFE 78 (323)
Q Consensus 43 ~~~~dl~~ll~~l~~~--~~~lvGhS~Gg~ia~~~a~~ 78 (323)
.+.++|..+++...-+ ++++.|||+||.+|+..|..
T Consensus 209 qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 209 QVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 3455566666665433 68999999999999998875
No 181
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=95.70 E-value=0.019 Score=53.94 Aligned_cols=39 Identities=21% Similarity=0.011 Sum_probs=33.3
Q ss_pred cchhhhchHHHHHHHhC----------------CceeEEEEechhhHHHHHHHHh
Q 020663 40 NSFRHFGCCTKTMIYLN----------------LVKQWLARHSAGALVAVNSYFE 78 (323)
Q Consensus 40 ~~~~~~~dl~~ll~~l~----------------~~~~~lvGhS~Gg~ia~~~a~~ 78 (323)
+...++.|+..++..++ ..+++++||||||.++..++..
T Consensus 521 n~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 521 NLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 45678889998888887 2489999999999999999975
No 182
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.67 E-value=0.0099 Score=51.46 Aligned_cols=52 Identities=17% Similarity=0.071 Sum_probs=39.1
Q ss_pred hhhchHHHHHHH----hCCceeEEEEechhhHHHHHHHHhccc--------ccceeeeecCCCC
Q 020663 43 RHFGCCTKTMIY----LNLVKQWLARHSAGALVAVNSYFEAPE--------RVAALILIAPAIL 94 (323)
Q Consensus 43 ~~~~dl~~ll~~----l~~~~~~lvGhS~Gg~ia~~~a~~~P~--------~v~~lil~~~~~~ 94 (323)
.+...+...++. -|.+|++||+|||||.+.+.+...+++ .|++++-++++..
T Consensus 163 ~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~l 226 (473)
T KOG2369|consen 163 QYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPWL 226 (473)
T ss_pred HHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCchhc
Confidence 344445555544 355899999999999999999998877 4888888886543
No 183
>PLN02454 triacylglycerol lipase
Probab=95.63 E-value=0.015 Score=50.09 Aligned_cols=31 Identities=23% Similarity=0.163 Sum_probs=22.6
Q ss_pred HHHHHHHhCCc--eeEEEEechhhHHHHHHHHh
Q 020663 48 CTKTMIYLNLV--KQWLARHSAGALVAVNSYFE 78 (323)
Q Consensus 48 l~~ll~~l~~~--~~~lvGhS~Gg~ia~~~a~~ 78 (323)
|..+++...-. ++++.|||+||.+|+..|..
T Consensus 216 V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 216 IKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 44444444333 38899999999999999864
No 184
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=95.50 E-value=0.61 Score=38.16 Aligned_cols=59 Identities=8% Similarity=0.015 Sum_probs=44.3
Q ss_pred CCccchhhhchHHHHHHHhCCceeEEEEechhhHH-----HHHHHHhcccccceeeeecCCCCcc
Q 020663 37 PSINSFRHFGCCTKTMIYLNLVKQWLARHSAGALV-----AVNSYFEAPERVAALILIAPAILAP 96 (323)
Q Consensus 37 ~~~~~~~~~~dl~~ll~~l~~~~~~lvGhS~Gg~i-----a~~~a~~~P~~v~~lil~~~~~~~~ 96 (323)
..++..+|++-+.+.+..+|-+ +++++.+.-+.- ++.-+...|..-.+++++++++...
T Consensus 149 G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR 212 (415)
T COG4553 149 GHFDLDDYIDYVIEMINFLGPD-AHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDAR 212 (415)
T ss_pred CCccHHHHHHHHHHHHHHhCCC-CcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCccccc
Confidence 3556778999999999999965 888888876543 4444445787889999999876543
No 185
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=95.48 E-value=0.032 Score=49.63 Aligned_cols=57 Identities=11% Similarity=-0.002 Sum_probs=43.4
Q ss_pred CccchhhhchHHHHHHHhC-------CceeEEEEechhhHHHHHHHHhcccccceeeeecCCCC
Q 020663 38 SINSFRHFGCCTKTMIYLN-------LVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAIL 94 (323)
Q Consensus 38 ~~~~~~~~~dl~~ll~~l~-------~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~ 94 (323)
-++++...+|+..+++++. -.|++++|-|+||++|..+-.+||+.|.+.+..++++.
T Consensus 86 yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 86 YLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp C-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred hcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 3667788889888888754 13799999999999999999999999999999988754
No 186
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=95.24 E-value=0.027 Score=43.86 Aligned_cols=39 Identities=18% Similarity=0.014 Sum_probs=30.7
Q ss_pred chhhhchHHHHHHHhCC-ceeEEEEechhhHHHHHHHHhc
Q 020663 41 SFRHFGCCTKTMIYLNL-VKQWLARHSAGALVAVNSYFEA 79 (323)
Q Consensus 41 ~~~~~~dl~~ll~~l~~-~~~~lvGhS~Gg~ia~~~a~~~ 79 (323)
..|..+....+|++.+- ++++|+|||.|+.+..++...+
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 44555566777777754 5899999999999999998864
No 187
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.17 E-value=0.056 Score=41.51 Aligned_cols=48 Identities=23% Similarity=0.173 Sum_probs=35.2
Q ss_pred hHHHHHHHhCCceeEEEEechhhHHHHHHHHh------cccccceeeeecCCCC
Q 020663 47 CCTKTMIYLNLVKQWLARHSAGALVAVNSYFE------APERVAALILIAPAIL 94 (323)
Q Consensus 47 dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~------~P~~v~~lil~~~~~~ 94 (323)
.+.+....-.-.+++|+|+|.|+.++..++.. ..++|.++++++-+..
T Consensus 70 ~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 70 LIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 33333333345699999999999999999877 3468999999986544
No 188
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=95.08 E-value=0.075 Score=45.08 Aligned_cols=59 Identities=27% Similarity=0.418 Sum_probs=47.1
Q ss_pred CCCEEEEecCCCCCCCchHHHHHHhhC------------------------CC-cEEEEcCCCCCCccccChHHHHHHHH
Q 020663 248 SCPVLIVTGDTDRIVPSWNAERLSRAI------------------------PG-STFEVIKNCGHVPQEEKVEEFVSIVA 302 (323)
Q Consensus 248 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~------------------------~~-~~~~~i~~~gH~~~~e~p~~~~~~i~ 302 (323)
.++||+..|+.|.+++.-..+.+.+.+ .+ .+++.+.+|||+++ .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 489999999999999866665555543 12 56677779999996 59999999999
Q ss_pred HHHHH
Q 020663 303 RFLQR 307 (323)
Q Consensus 303 ~fl~~ 307 (323)
.|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99965
No 189
>PLN02408 phospholipase A1
Probab=95.07 E-value=0.027 Score=47.88 Aligned_cols=34 Identities=15% Similarity=0.103 Sum_probs=25.1
Q ss_pred chHHHHHHHhCCc--eeEEEEechhhHHHHHHHHhc
Q 020663 46 GCCTKTMIYLNLV--KQWLARHSAGALVAVNSYFEA 79 (323)
Q Consensus 46 ~dl~~ll~~l~~~--~~~lvGhS~Gg~ia~~~a~~~ 79 (323)
+.|..+++..+.+ ++++.|||+||.+|...|...
T Consensus 186 ~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 186 EEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 4455555555433 589999999999999988754
No 190
>PLN02934 triacylglycerol lipase
Probab=94.97 E-value=0.031 Score=49.31 Aligned_cols=35 Identities=14% Similarity=-0.076 Sum_probs=28.3
Q ss_pred hhhchHHHHHHHhCCceeEEEEechhhHHHHHHHH
Q 020663 43 RHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYF 77 (323)
Q Consensus 43 ~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~ 77 (323)
.....+..+++.....++++.|||+||.+|..+|.
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 34555777777766678999999999999999875
No 191
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=94.97 E-value=0.25 Score=42.31 Aligned_cols=52 Identities=19% Similarity=0.079 Sum_probs=38.0
Q ss_pred hhhchHHHHHHHhCCceeEEEEechhhHHHHHHHHhc--c---cccceeeeecCCCC
Q 020663 43 RHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEA--P---ERVAALILIAPAIL 94 (323)
Q Consensus 43 ~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~--P---~~v~~lil~~~~~~ 94 (323)
+.++-...+++..|.++++|+|-|.||.+++.+.... + -.-+++|+++|=+.
T Consensus 180 qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~ 236 (374)
T PF10340_consen 180 QLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVN 236 (374)
T ss_pred HHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcC
Confidence 4444455666667888999999999999999887631 1 13578999998543
No 192
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=94.86 E-value=0.043 Score=46.48 Aligned_cols=40 Identities=28% Similarity=0.292 Sum_probs=32.5
Q ss_pred hCCceeEEEEechhhHHHHHHHHhcccc-----cceeeeecCCCC
Q 020663 55 LNLVKQWLARHSAGALVAVNSYFEAPER-----VAALILIAPAIL 94 (323)
Q Consensus 55 l~~~~~~lvGhS~Gg~ia~~~a~~~P~~-----v~~lil~~~~~~ 94 (323)
.|.+|+.|||||+|+.+...+....+++ |+.+++++.+..
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 4677899999999999998887765543 899999987644
No 193
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=94.74 E-value=0.044 Score=46.99 Aligned_cols=50 Identities=12% Similarity=-0.071 Sum_probs=38.2
Q ss_pred hhhchHHHHHHHhC---C-ceeEEEEechhhHHHHHHHHhcccccceeeeecCC
Q 020663 43 RHFGCCTKTMIYLN---L-VKQWLARHSAGALVAVNSYFEAPERVAALILIAPA 92 (323)
Q Consensus 43 ~~~~dl~~ll~~l~---~-~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~ 92 (323)
|....+..+...+. . -|++++|+|.||.+|...|.--|..+++++=-++.
T Consensus 165 D~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~ 218 (403)
T PF11144_consen 165 DIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSY 218 (403)
T ss_pred HHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCcc
Confidence 55555555555542 1 38899999999999999999999999998865554
No 194
>PLN02310 triacylglycerol lipase
Probab=94.64 E-value=0.069 Score=46.10 Aligned_cols=35 Identities=17% Similarity=0.208 Sum_probs=25.0
Q ss_pred hhchHHHHHHHhC----CceeEEEEechhhHHHHHHHHh
Q 020663 44 HFGCCTKTMIYLN----LVKQWLARHSAGALVAVNSYFE 78 (323)
Q Consensus 44 ~~~dl~~ll~~l~----~~~~~lvGhS~Gg~ia~~~a~~ 78 (323)
..+.+..+++... .-++++.|||+||.+|+..|..
T Consensus 191 Vl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 191 VMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 3344566665542 1378999999999999988854
No 195
>PLN02209 serine carboxypeptidase
Probab=94.55 E-value=0.13 Score=45.43 Aligned_cols=59 Identities=24% Similarity=0.371 Sum_probs=48.0
Q ss_pred CCCEEEEecCCCCCCCchHHHHHHhhC------------------------CC-cEEEEcCCCCCCccccChHHHHHHHH
Q 020663 248 SCPVLIVTGDTDRIVPSWNAERLSRAI------------------------PG-STFEVIKNCGHVPQEEKVEEFVSIVA 302 (323)
Q Consensus 248 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~------------------------~~-~~~~~i~~~gH~~~~e~p~~~~~~i~ 302 (323)
.++|++..|+.|.+++.-..+.+.+.+ .+ .+++.+.+|||++. .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 479999999999999876666665543 23 56777889999996 59999999999
Q ss_pred HHHHH
Q 020663 303 RFLQR 307 (323)
Q Consensus 303 ~fl~~ 307 (323)
+|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99964
No 196
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=94.52 E-value=0.11 Score=45.74 Aligned_cols=61 Identities=30% Similarity=0.508 Sum_probs=49.0
Q ss_pred CCCEEEEecCCCCCCCchHHHHHHhhC-------------------------CCcEEEEcCCCCCCccccChHHHHHHHH
Q 020663 248 SCPVLIVTGDTDRIVPSWNAERLSRAI-------------------------PGSTFEVIKNCGHVPQEEKVEEFVSIVA 302 (323)
Q Consensus 248 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~-------------------------~~~~~~~i~~~gH~~~~e~p~~~~~~i~ 302 (323)
..++++..|+.|.++|.-..+.+.+.+ .+..+..+.|+||++..++|+.....+.
T Consensus 363 ~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~ 442 (454)
T KOG1282|consen 363 GYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQ 442 (454)
T ss_pred ceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHH
Confidence 379999999999999976666553332 1234577889999999999999999999
Q ss_pred HHHHHh
Q 020663 303 RFLQRA 308 (323)
Q Consensus 303 ~fl~~~ 308 (323)
.|+...
T Consensus 443 ~fl~g~ 448 (454)
T KOG1282|consen 443 RFLNGQ 448 (454)
T ss_pred HHHcCC
Confidence 999864
No 197
>PLN02324 triacylglycerol lipase
Probab=94.48 E-value=0.046 Score=47.20 Aligned_cols=34 Identities=21% Similarity=0.145 Sum_probs=25.0
Q ss_pred hchHHHHHHHhCCc--eeEEEEechhhHHHHHHHHh
Q 020663 45 FGCCTKTMIYLNLV--KQWLARHSAGALVAVNSYFE 78 (323)
Q Consensus 45 ~~dl~~ll~~l~~~--~~~lvGhS~Gg~ia~~~a~~ 78 (323)
.++|..+++...-+ ++++.|||+||.+|+..|..
T Consensus 200 l~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 200 QGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 34455566655432 68899999999999998864
No 198
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=94.43 E-value=0.036 Score=47.23 Aligned_cols=53 Identities=13% Similarity=0.108 Sum_probs=40.5
Q ss_pred chhhhchHHHHHHHhCC------ceeEEEEechhhHHHHHHHHhcccccceeeeecCCC
Q 020663 41 SFRHFGCCTKTMIYLNL------VKQWLARHSAGALVAVNSYFEAPERVAALILIAPAI 93 (323)
Q Consensus 41 ~~~~~~dl~~ll~~l~~------~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~ 93 (323)
.+.-.+|...++..|.- .+++.+|-|+||++|..+=.+||..|.|...-+.++
T Consensus 144 seQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 144 SEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred HHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 45555566666666532 479999999999999999999999888877666543
No 199
>PLN02802 triacylglycerol lipase
Probab=94.41 E-value=0.051 Score=47.97 Aligned_cols=35 Identities=23% Similarity=0.109 Sum_probs=25.3
Q ss_pred hchHHHHHHHhCC--ceeEEEEechhhHHHHHHHHhc
Q 020663 45 FGCCTKTMIYLNL--VKQWLARHSAGALVAVNSYFEA 79 (323)
Q Consensus 45 ~~dl~~ll~~l~~--~~~~lvGhS~Gg~ia~~~a~~~ 79 (323)
.++|..+++.... .++++.|||+||.+|...|...
T Consensus 315 l~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 315 VGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 3445556655543 2688999999999999888753
No 200
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=94.21 E-value=0.041 Score=45.07 Aligned_cols=39 Identities=23% Similarity=0.259 Sum_probs=34.3
Q ss_pred ceeEEEEechhhHHHHHHHHhcccccceeeeecCCCCcc
Q 020663 58 VKQWLARHSAGALVAVNSYFEAPERVAALILIAPAILAP 96 (323)
Q Consensus 58 ~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~~~ 96 (323)
+.-+|.|-|+||.+++..+..||+.+-.++..+|.....
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~ 215 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWT 215 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCccccC
Confidence 346799999999999999999999999999999875533
No 201
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=94.18 E-value=0.19 Score=44.53 Aligned_cols=59 Identities=27% Similarity=0.418 Sum_probs=47.6
Q ss_pred CCCEEEEecCCCCCCCchHHHHHHhhC------------------------CC-cEEEEcCCCCCCccccChHHHHHHHH
Q 020663 248 SCPVLIVTGDTDRIVPSWNAERLSRAI------------------------PG-STFEVIKNCGHVPQEEKVEEFVSIVA 302 (323)
Q Consensus 248 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~------------------------~~-~~~~~i~~~gH~~~~e~p~~~~~~i~ 302 (323)
..+||+..|+.|.+++.-..+.+.+.+ .+ .+++.+-+|||++. .+|++..+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 579999999999999876666665543 12 46777888999996 58999999999
Q ss_pred HHHHH
Q 020663 303 RFLQR 307 (323)
Q Consensus 303 ~fl~~ 307 (323)
.|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99965
No 202
>PLN02753 triacylglycerol lipase
Probab=94.14 E-value=0.062 Score=47.65 Aligned_cols=33 Identities=15% Similarity=0.113 Sum_probs=24.2
Q ss_pred chHHHHHHHhCC-----ceeEEEEechhhHHHHHHHHh
Q 020663 46 GCCTKTMIYLNL-----VKQWLARHSAGALVAVNSYFE 78 (323)
Q Consensus 46 ~dl~~ll~~l~~-----~~~~lvGhS~Gg~ia~~~a~~ 78 (323)
+.|..+++..+. -++++.|||+||.+|+..|..
T Consensus 295 ~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 295 TEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 344555555432 479999999999999998864
No 203
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=94.00 E-value=0.13 Score=39.31 Aligned_cols=61 Identities=18% Similarity=0.257 Sum_probs=45.8
Q ss_pred CCCEEEEecCCCCCCCchHHHHHHhhC---CC--cEEEEcCCCCCCccccC---hHHHHHHHHHHHHHh
Q 020663 248 SCPVLIVTGDTDRIVPSWNAERLSRAI---PG--STFEVIKNCGHVPQEEK---VEEFVSIVARFLQRA 308 (323)
Q Consensus 248 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~---~~--~~~~~i~~~gH~~~~e~---p~~~~~~i~~fl~~~ 308 (323)
+++.+-|-|+.|.++.+.........+ |. ...++.+|+||+-...- .+++.-.|.+|+.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 467788999999999877666555554 42 46778899999865443 578888999998753
No 204
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=93.88 E-value=0.32 Score=41.07 Aligned_cols=62 Identities=19% Similarity=0.241 Sum_probs=48.0
Q ss_pred ccCCCCEEEEecCCCCCCCchHHHHHHhhCCC-cEEEEcCCCCCCccccChHHHHHHHHHHHHHhc
Q 020663 245 HEISCPVLIVTGDTDRIVPSWNAERLSRAIPG-STFEVIKNCGHVPQEEKVEEFVSIVARFLQRAF 309 (323)
Q Consensus 245 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 309 (323)
.++..|.+++.|..|.+..+..+..+.+.+|+ ..+..+||..|..... .+.+.|..|+....
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n~---~i~esl~~flnrfq 388 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLINQ---FIKESLEPFLNRFQ 388 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhHH---HHHHHHHHHHHHHh
Confidence 46788999999999999999989999999997 4577889999976533 34455666665544
No 205
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=93.69 E-value=0.11 Score=43.38 Aligned_cols=40 Identities=18% Similarity=0.067 Sum_probs=30.3
Q ss_pred cchhhhchHHHHHHHh-----CC--ceeEEEEechhhHHHHHHHHhc
Q 020663 40 NSFRHFGCCTKTMIYL-----NL--VKQWLARHSAGALVAVNSYFEA 79 (323)
Q Consensus 40 ~~~~~~~dl~~ll~~l-----~~--~~~~lvGhS~Gg~ia~~~a~~~ 79 (323)
+..+++.|-.+.++.| |+ +++++.|||+||.++......+
T Consensus 190 s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 190 SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 4677777766666665 22 6799999999999999866654
No 206
>PLN02719 triacylglycerol lipase
Probab=93.69 E-value=0.086 Score=46.65 Aligned_cols=20 Identities=30% Similarity=0.358 Sum_probs=18.0
Q ss_pred eeEEEEechhhHHHHHHHHh
Q 020663 59 KQWLARHSAGALVAVNSYFE 78 (323)
Q Consensus 59 ~~~lvGhS~Gg~ia~~~a~~ 78 (323)
++++.|||+||.+|+..|..
T Consensus 299 sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 299 SITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred eEEEecCcHHHHHHHHHHHH
Confidence 78999999999999998864
No 207
>PLN03037 lipase class 3 family protein; Provisional
Probab=93.67 E-value=0.086 Score=46.73 Aligned_cols=35 Identities=17% Similarity=0.243 Sum_probs=25.5
Q ss_pred hhchHHHHHHHhC----CceeEEEEechhhHHHHHHHHh
Q 020663 44 HFGCCTKTMIYLN----LVKQWLARHSAGALVAVNSYFE 78 (323)
Q Consensus 44 ~~~dl~~ll~~l~----~~~~~lvGhS~Gg~ia~~~a~~ 78 (323)
..++|..+++... -.++.+.|||+||.+|+..|..
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 3445666666553 1368999999999999998864
No 208
>PLN02761 lipase class 3 family protein
Probab=93.48 E-value=0.096 Score=46.47 Aligned_cols=34 Identities=21% Similarity=0.304 Sum_probs=24.0
Q ss_pred hchHHHHHHHhC-----C-ceeEEEEechhhHHHHHHHHh
Q 020663 45 FGCCTKTMIYLN-----L-VKQWLARHSAGALVAVNSYFE 78 (323)
Q Consensus 45 ~~dl~~ll~~l~-----~-~~~~lvGhS~Gg~ia~~~a~~ 78 (323)
.+.|..+++..+ - -++++.|||+||.+|+..|..
T Consensus 275 l~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 275 LAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 344555555542 1 268999999999999988853
No 209
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.44 E-value=0.15 Score=39.51 Aligned_cols=46 Identities=20% Similarity=0.288 Sum_probs=37.2
Q ss_pred HHHhCCceeEEEEechhhHHHHHHHHhccc--ccceeeeecCCCCcch
Q 020663 52 MIYLNLVKQWLARHSAGALVAVNSYFEAPE--RVAALILIAPAILAPR 97 (323)
Q Consensus 52 l~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~--~v~~lil~~~~~~~~~ 97 (323)
+.-...+.+.+|.||.||...+.+..++|+ +|.++.+.+++...|.
T Consensus 184 v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~p~ 231 (297)
T KOG3967|consen 184 VLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGSPQ 231 (297)
T ss_pred hcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccCch
Confidence 333456789999999999999999999886 7889999988754443
No 210
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=93.22 E-value=0.97 Score=40.96 Aligned_cols=49 Identities=6% Similarity=-0.164 Sum_probs=40.0
Q ss_pred chHHHHHHHhCC--ceeEEEEechhhHHHHHHHHhcccccceeeeecCCCC
Q 020663 46 GCCTKTMIYLNL--VKQWLARHSAGALVAVNSYFEAPERVAALILIAPAIL 94 (323)
Q Consensus 46 ~dl~~ll~~l~~--~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~ 94 (323)
-|+.+++....+ .+|..+|.|++|...+.+|+..|..+++++...+...
T Consensus 110 ~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 110 YDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred hHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 356666666544 5899999999999999999998888999998887644
No 211
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=92.90 E-value=0.14 Score=43.80 Aligned_cols=37 Identities=14% Similarity=0.113 Sum_probs=30.7
Q ss_pred hhhhchHHHHHHHhCCceeEEEEechhhHHHHHHHHh
Q 020663 42 FRHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFE 78 (323)
Q Consensus 42 ~~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~ 78 (323)
..+.+++..+++...--++.+-|||+||.+|...|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 4566777888888876789999999999999998874
No 212
>PLN02847 triacylglycerol lipase
Probab=92.87 E-value=0.13 Score=46.31 Aligned_cols=24 Identities=21% Similarity=0.037 Sum_probs=20.0
Q ss_pred hCCceeEEEEechhhHHHHHHHHh
Q 020663 55 LNLVKQWLARHSAGALVAVNSYFE 78 (323)
Q Consensus 55 l~~~~~~lvGhS~Gg~ia~~~a~~ 78 (323)
...-+++++|||+||.+|..++..
T Consensus 248 ~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 248 YPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCCeEEEeccChHHHHHHHHHHH
Confidence 333489999999999999998875
No 213
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=92.64 E-value=0.73 Score=41.95 Aligned_cols=53 Identities=19% Similarity=0.154 Sum_probs=40.5
Q ss_pred chhhhchHHHHHHHh--CCceeEEEEechhhHHHHHHHHhcccccceeeeecCCC
Q 020663 41 SFRHFGCCTKTMIYL--NLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAI 93 (323)
Q Consensus 41 ~~~~~~dl~~ll~~l--~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~ 93 (323)
..|+....+-+++.- .-++..+.|.|-||.++..++.++|+.+.++|+--|..
T Consensus 530 f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpfm 584 (712)
T KOG2237|consen 530 FDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFM 584 (712)
T ss_pred HHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcce
Confidence 344555555555442 23578899999999999999999999999999887764
No 214
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=92.02 E-value=0.63 Score=38.19 Aligned_cols=35 Identities=17% Similarity=0.036 Sum_probs=28.1
Q ss_pred ceeEEEEechhhHHHHHHHHhccc-ccceeeeecCC
Q 020663 58 VKQWLARHSAGALVAVNSYFEAPE-RVAALILIAPA 92 (323)
Q Consensus 58 ~~~~lvGhS~Gg~ia~~~a~~~P~-~v~~lil~~~~ 92 (323)
+-+++||+|-||.++-.++.+.|+ .|+.+|.++++
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred cceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 459999999999999999999876 69999999975
No 215
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=90.43 E-value=11 Score=37.80 Aligned_cols=56 Identities=21% Similarity=0.078 Sum_probs=38.6
Q ss_pred CCccchhhhchHHHHHHHhC-CceeEEEEechhhHHHHHHHHhccc--ccceeeeecCC
Q 020663 37 PSINSFRHFGCCTKTMIYLN-LVKQWLARHSAGALVAVNSYFEAPE--RVAALILIAPA 92 (323)
Q Consensus 37 ~~~~~~~~~~dl~~ll~~l~-~~~~~lvGhS~Gg~ia~~~a~~~P~--~v~~lil~~~~ 92 (323)
|.-++++.+.....-++++. ..++.++|+|+|+.++..+|....+ ....+|++++.
T Consensus 2160 P~dSies~A~~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2160 PLDSIESLAAYYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred CcchHHHHHHHHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 33445555554444444443 3689999999999999999986433 46669999975
No 216
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=90.17 E-value=0.3 Score=44.27 Aligned_cols=43 Identities=12% Similarity=-0.043 Sum_probs=33.5
Q ss_pred HHHhCC--ceeEEEEechhhHHHHHHHHh--cccccceeeeecCCCC
Q 020663 52 MIYLNL--VKQWLARHSAGALVAVNSYFE--APERVAALILIAPAIL 94 (323)
Q Consensus 52 l~~l~~--~~~~lvGhS~Gg~ia~~~a~~--~P~~v~~lil~~~~~~ 94 (323)
++.+|. +++.|+|+|.||..+..++.. .+..++++|+.++...
T Consensus 168 i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 168 IAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 344454 589999999999999888875 3457999999987654
No 217
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=89.08 E-value=2.5 Score=37.46 Aligned_cols=54 Identities=13% Similarity=0.019 Sum_probs=46.1
Q ss_pred chhhhchHHHHHHHhCC-------ceeEEEEechhhHHHHHHHHhcccccceeeeecCCCC
Q 020663 41 SFRHFGCCTKTMIYLNL-------VKQWLARHSAGALVAVNSYFEAPERVAALILIAPAIL 94 (323)
Q Consensus 41 ~~~~~~dl~~ll~~l~~-------~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~ 94 (323)
+.....|+.+++++++. .|.+.+|-|+-|.++..+=..||+.+.+-|..++++.
T Consensus 148 s~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 148 SLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 55778899999988753 2788999999999999999999999999998887654
No 218
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=88.85 E-value=0.41 Score=38.33 Aligned_cols=33 Identities=21% Similarity=0.000 Sum_probs=27.2
Q ss_pred eeEEEEechhhHHHHHHHHhcccccceeeeecC
Q 020663 59 KQWLARHSAGALVAVNSYFEAPERVAALILIAP 91 (323)
Q Consensus 59 ~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~ 91 (323)
+++-||||+|+.+-+.+...++..-++-|+++-
T Consensus 91 P~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 91 PVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred CeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 567799999999999999888766677787774
No 219
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.44 E-value=0.4 Score=42.31 Aligned_cols=40 Identities=20% Similarity=0.149 Sum_probs=31.6
Q ss_pred hCCceeEEEEechhhHHHHHHHHhc-----ccccceeeeecCCCC
Q 020663 55 LNLVKQWLARHSAGALVAVNSYFEA-----PERVAALILIAPAIL 94 (323)
Q Consensus 55 l~~~~~~lvGhS~Gg~ia~~~a~~~-----P~~v~~lil~~~~~~ 94 (323)
+|.+|+.|||+|+|+-+...+.... -+.|..+++++.+..
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~ 488 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVP 488 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCcc
Confidence 5788999999999999988766532 236888999997654
No 220
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=88.37 E-value=0.26 Score=36.79 Aligned_cols=37 Identities=22% Similarity=0.196 Sum_probs=33.3
Q ss_pred ceeEEEEechhhHHHHHHHHhcccccceeeeecCCCC
Q 020663 58 VKQWLARHSAGALVAVNSYFEAPERVAALILIAPAIL 94 (323)
Q Consensus 58 ~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~ 94 (323)
...++-|-||||..|..+.-+||+.+.++|.+++...
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred CCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 4567789999999999999999999999999998754
No 221
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=86.69 E-value=0.92 Score=40.80 Aligned_cols=63 Identities=8% Similarity=0.135 Sum_probs=46.2
Q ss_pred CCCEEEEecCCCCCCCchHHHHHHhh----CC--------CcEEEEcCCCCCCcccc--ChHHHHHHHHHHHHHhcC
Q 020663 248 SCPVLIVTGDTDRIVPSWNAERLSRA----IP--------GSTFEVIKNCGHVPQEE--KVEEFVSIVARFLQRAFG 310 (323)
Q Consensus 248 ~~Pvl~i~G~~D~~~~~~~~~~~~~~----~~--------~~~~~~i~~~gH~~~~e--~p~~~~~~i~~fl~~~~~ 310 (323)
--.+++.||..|.++|+.....+.+. ++ -.++..+||.+|..--. .+-.....|.+|+++-..
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~A 429 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGKA 429 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCCC
Confidence 46799999999999998766444443 32 15788999999975333 455788999999986543
No 222
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=85.34 E-value=1.4 Score=36.01 Aligned_cols=35 Identities=20% Similarity=0.295 Sum_probs=25.8
Q ss_pred hCCceeEEEEechhhHHHHHHHHhcccccceeeeecC
Q 020663 55 LNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAP 91 (323)
Q Consensus 55 l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~ 91 (323)
..-.++.|-|||+||.+|..+..++. +-.+..-+|
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 273 YPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred CCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 34468899999999999999988764 344444444
No 223
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=85.34 E-value=1.4 Score=36.01 Aligned_cols=35 Identities=20% Similarity=0.295 Sum_probs=25.8
Q ss_pred hCCceeEEEEechhhHHHHHHHHhcccccceeeeecC
Q 020663 55 LNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAP 91 (323)
Q Consensus 55 l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~ 91 (323)
..-.++.|-|||+||.+|..+..++. +-.+..-+|
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 273 YPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred CCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 34468899999999999999988764 344444444
No 224
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=84.80 E-value=1.8 Score=39.65 Aligned_cols=59 Identities=15% Similarity=-0.005 Sum_probs=38.8
Q ss_pred CccchhhhchHHHHH---HHhCC--ceeEEEEechhhHHHHHHHHhc--ccccceeeeecCCCCcc
Q 020663 38 SINSFRHFGCCTKTM---IYLNL--VKQWLARHSAGALVAVNSYFEA--PERVAALILIAPAILAP 96 (323)
Q Consensus 38 ~~~~~~~~~dl~~ll---~~l~~--~~~~lvGhS~Gg~ia~~~a~~~--P~~v~~lil~~~~~~~~ 96 (323)
+....|....|+-+- .++|. ++|.|+|||.||..+..+...- ...++++|+.++....+
T Consensus 183 N~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~~~ 248 (535)
T PF00135_consen 183 NYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSALSP 248 (535)
T ss_dssp THHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TTST
T ss_pred hhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccccc
Confidence 344445554444444 44565 4799999999999998877652 24799999999865443
No 225
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=83.95 E-value=9.1 Score=31.24 Aligned_cols=47 Identities=15% Similarity=-0.008 Sum_probs=35.0
Q ss_pred chHHHHHHHhCC-----ceeEEEEechhhHHHHHHHHhccc-ccceeeeecCC
Q 020663 46 GCCTKTMIYLNL-----VKQWLARHSAGALVAVNSYFEAPE-RVAALILIAPA 92 (323)
Q Consensus 46 ~dl~~ll~~l~~-----~~~~lvGhS~Gg~ia~~~a~~~P~-~v~~lil~~~~ 92 (323)
+.+..+.++++. +-++++|.|.||.++-.++..-|+ .|..+|.++++
T Consensus 75 ~Qv~~~ce~v~~m~~lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 75 EQVDVACEKVKQMPELSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred HHHHHHHHHHhcchhccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 334444444432 358999999999999999987655 58999988865
No 226
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.80 E-value=2.3 Score=38.56 Aligned_cols=35 Identities=20% Similarity=0.346 Sum_probs=25.3
Q ss_pred ceeEEEEechhhHHHHHHHHh-----ccc------ccceeeeecCC
Q 020663 58 VKQWLARHSAGALVAVNSYFE-----APE------RVAALILIAPA 92 (323)
Q Consensus 58 ~~~~lvGhS~Gg~ia~~~a~~-----~P~------~v~~lil~~~~ 92 (323)
.+++.|||||||.++=.+... .|+ ..+|+|+++.+
T Consensus 526 RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 526 RPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred CceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 578899999999988665543 343 46777777754
No 227
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=82.76 E-value=1.4 Score=37.88 Aligned_cols=50 Identities=20% Similarity=0.161 Sum_probs=37.4
Q ss_pred chhhhchHHHHHHHh----CCceeEEEEechhhHHHHHHHHhccc----ccceeeeec
Q 020663 41 SFRHFGCCTKTMIYL----NLVKQWLARHSAGALVAVNSYFEAPE----RVAALILIA 90 (323)
Q Consensus 41 ~~~~~~dl~~ll~~l----~~~~~~lvGhS~Gg~ia~~~a~~~P~----~v~~lil~~ 90 (323)
++..++|+..+++.. +..++.|+|+|+|+=+--..-.+.|. +|+.+.|++
T Consensus 305 Pe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~~~~r~~v~~~~ll~ 362 (456)
T COG3946 305 PEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLPPATRQRVRMVSLLG 362 (456)
T ss_pred HHHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCCHHHHHHHHHHHHHh
Confidence 668888988888764 66899999999999887776666654 344444444
No 228
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=80.20 E-value=1.3 Score=39.13 Aligned_cols=56 Identities=14% Similarity=0.005 Sum_probs=39.4
Q ss_pred ccchhhhch---HHHHHHHhCC--ceeEEEEechhhHHHHHHHHh--cccccceeeeecCCCC
Q 020663 39 INSFRHFGC---CTKTMIYLNL--VKQWLARHSAGALVAVNSYFE--APERVAALILIAPAIL 94 (323)
Q Consensus 39 ~~~~~~~~d---l~~ll~~l~~--~~~~lvGhS~Gg~ia~~~a~~--~P~~v~~lil~~~~~~ 94 (323)
+...|.+.. +.+-|+++|. ++|.|+|+|-||+.++.+.+. ....++++|+.++...
T Consensus 156 ~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 156 LGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 344444443 4455566776 469999999999999887764 2237999999998754
No 229
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=79.80 E-value=6.3 Score=36.00 Aligned_cols=51 Identities=20% Similarity=0.147 Sum_probs=38.8
Q ss_pred hhhhchHHHHHHHh---CC---ceeEEEEechhhHHHHHHHHhcccccceeeeecCC
Q 020663 42 FRHFGCCTKTMIYL---NL---VKQWLARHSAGALVAVNSYFEAPERVAALILIAPA 92 (323)
Q Consensus 42 ~~~~~dl~~ll~~l---~~---~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~ 92 (323)
+...+|..++.+.| |+ +++-+-|-|-||.+.-....++||.+.++|.--|.
T Consensus 478 q~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPl 534 (648)
T COG1505 478 QNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPL 534 (648)
T ss_pred hhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccch
Confidence 33445555555554 33 57889999999999999999999999988877665
No 230
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=79.13 E-value=1.6 Score=37.08 Aligned_cols=31 Identities=13% Similarity=0.066 Sum_probs=25.5
Q ss_pred HHHHHHHhCCceeEEEEechhhHHHHHHHHh
Q 020663 48 CTKTMIYLNLVKQWLARHSAGALVAVNSYFE 78 (323)
Q Consensus 48 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~ 78 (323)
+.++++..|+++-.++|||+|=+.|+.++..
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTTS
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCCc
Confidence 5566788899999999999998888876654
No 231
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=78.61 E-value=2.6 Score=35.36 Aligned_cols=31 Identities=13% Similarity=-0.002 Sum_probs=25.4
Q ss_pred HHHHHHHhCCceeEEEEechhhHHHHHHHHh
Q 020663 48 CTKTMIYLNLVKQWLARHSAGALVAVNSYFE 78 (323)
Q Consensus 48 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~ 78 (323)
+.++++.+|+++-.++|||+|-..|+.++..
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHhCC
Confidence 4456677899999999999999999887754
No 232
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=78.29 E-value=3.1 Score=33.29 Aligned_cols=22 Identities=27% Similarity=0.073 Sum_probs=19.4
Q ss_pred ceeEEEEechhhHHHHHHHHhc
Q 020663 58 VKQWLARHSAGALVAVNSYFEA 79 (323)
Q Consensus 58 ~~~~lvGhS~Gg~ia~~~a~~~ 79 (323)
++++++|+|.|+.++...+.+.
T Consensus 48 ~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 48 GPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CCEEEEEECHHHHHHHHHHHHH
Confidence 6899999999999999877754
No 233
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=78.08 E-value=0.92 Score=39.00 Aligned_cols=37 Identities=24% Similarity=0.118 Sum_probs=28.7
Q ss_pred chhhhchHHHHHHHhCCceeEEEEechhhHHHHHHHH
Q 020663 41 SFRHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYF 77 (323)
Q Consensus 41 ~~~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~ 77 (323)
.++.++++.+.+....++++..||||+||.++..+..
T Consensus 133 G~Rla~~~~e~~~~~si~kISfvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 133 GERLAEEVKETLYDYSIEKISFVGHSLGGLVARYAIG 169 (405)
T ss_pred ecccHHHHhhhhhccccceeeeeeeecCCeeeeEEEE
Confidence 4466777777777777899999999999998765443
No 234
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=77.38 E-value=2.9 Score=35.05 Aligned_cols=32 Identities=16% Similarity=-0.047 Sum_probs=25.8
Q ss_pred HHHHHHHhCCceeEEEEechhhHHHHHHHHhc
Q 020663 48 CTKTMIYLNLVKQWLARHSAGALVAVNSYFEA 79 (323)
Q Consensus 48 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 79 (323)
+.++++..|+++..++|||+|=..|+.++...
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG~~ 97 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAGVL 97 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhCCC
Confidence 45566777899999999999999998877543
No 235
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=75.45 E-value=11 Score=32.98 Aligned_cols=56 Identities=13% Similarity=0.035 Sum_probs=46.3
Q ss_pred CCccchhhhchHHHHHHHhC---CceeEEEEechhhHHHHHHHHhcccccceeeeecCC
Q 020663 37 PSINSFRHFGCCTKTMIYLN---LVKQWLARHSAGALVAVNSYFEAPERVAALILIAPA 92 (323)
Q Consensus 37 ~~~~~~~~~~dl~~ll~~l~---~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~ 92 (323)
..++++.-+.|...+++.+. -.+.+--|-|-||+.++.+=..||+-|++.|.--.+
T Consensus 110 ~~Lti~QAA~D~Hri~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 110 SYLTIWQAASDQHRIVQAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred ccccHhHhhHHHHHHHHHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 34567788999999998874 257778999999999999999999999998876654
No 236
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=74.68 E-value=3.5 Score=34.37 Aligned_cols=32 Identities=19% Similarity=0.053 Sum_probs=25.3
Q ss_pred HHHHHHHhC-CceeEEEEechhhHHHHHHHHhc
Q 020663 48 CTKTMIYLN-LVKQWLARHSAGALVAVNSYFEA 79 (323)
Q Consensus 48 l~~ll~~l~-~~~~~lvGhS~Gg~ia~~~a~~~ 79 (323)
+..++...| +++..++|||+|=+.|+.++...
T Consensus 72 l~~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 72 LYLKLKEQGGLKPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred HHHHHHHcCCCCCCEEeecCHHHHHHHHHhCCC
Confidence 344556667 89999999999999998887654
No 237
>PRK10279 hypothetical protein; Provisional
Probab=74.28 E-value=3 Score=35.04 Aligned_cols=34 Identities=15% Similarity=0.132 Sum_probs=27.2
Q ss_pred HHHHHHHhCCceeEEEEechhhHHHHHHHHhccc
Q 020663 48 CTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPE 81 (323)
Q Consensus 48 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~ 81 (323)
+.+.++..|++.-.++|-|+|+.++..||....+
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~~ 56 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRLS 56 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCChH
Confidence 4455556788888899999999999999986544
No 238
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=72.66 E-value=5.3 Score=33.70 Aligned_cols=32 Identities=16% Similarity=0.087 Sum_probs=26.0
Q ss_pred HHHHHHHhCCceeEEEEechhhHHHHHHHHhc
Q 020663 48 CTKTMIYLNLVKQWLARHSAGALVAVNSYFEA 79 (323)
Q Consensus 48 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 79 (323)
+...++..|+..-.++|-|+|+.++..+|..+
T Consensus 33 vL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 33 VIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 45556666887777899999999999999864
No 239
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=72.10 E-value=5.6 Score=30.24 Aligned_cols=33 Identities=24% Similarity=0.111 Sum_probs=25.3
Q ss_pred HHHHHHHhCCceeEEEEechhhHHHHHHHHhcc
Q 020663 48 CTKTMIYLNLVKQWLARHSAGALVAVNSYFEAP 80 (323)
Q Consensus 48 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P 80 (323)
+.+.++..++..-.+.|-|.|+.+|..++...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 334444457777789999999999999998654
No 240
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=69.66 E-value=15 Score=25.11 Aligned_cols=43 Identities=14% Similarity=0.040 Sum_probs=33.4
Q ss_pred chHHHHHHHhCCceeEEEEechhhH--HHHHHHHhcccccceeee
Q 020663 46 GCCTKTMIYLNLVKQWLARHSAGAL--VAVNSYFEAPERVAALIL 88 (323)
Q Consensus 46 ~dl~~ll~~l~~~~~~lvGhS~Gg~--ia~~~a~~~P~~v~~lil 88 (323)
..+..+++.+.-.++++||-|--.= +-..+|.++|++|.++.+
T Consensus 53 ~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 53 DNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred HHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEEEE
Confidence 4578888888889999999876553 334567789999998764
No 241
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=67.74 E-value=8.2 Score=31.86 Aligned_cols=32 Identities=16% Similarity=0.022 Sum_probs=25.6
Q ss_pred HHHHHHHhCCceeEEEEechhhHHHHHHHHhc
Q 020663 48 CTKTMIYLNLVKQWLARHSAGALVAVNSYFEA 79 (323)
Q Consensus 48 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 79 (323)
+...+++.|+.--.++|-|+|+.++..+|..+
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 44455667887667899999999999999864
No 242
>PF03283 PAE: Pectinacetylesterase
Probab=67.71 E-value=21 Score=31.01 Aligned_cols=37 Identities=24% Similarity=0.186 Sum_probs=26.4
Q ss_pred ceeEEEEechhhHHHHHHHH----hcccccceeeeecCCCC
Q 020663 58 VKQWLARHSAGALVAVNSYF----EAPERVAALILIAPAIL 94 (323)
Q Consensus 58 ~~~~lvGhS~Gg~ia~~~a~----~~P~~v~~lil~~~~~~ 94 (323)
++++|-|.|.||.-++..+- ..|..++-..+.+++.+
T Consensus 156 ~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f 196 (361)
T PF03283_consen 156 KQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFF 196 (361)
T ss_pred ceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccccc
Confidence 68999999999998877554 46655555555665543
No 243
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=67.46 E-value=7.3 Score=32.88 Aligned_cols=33 Identities=24% Similarity=0.112 Sum_probs=27.9
Q ss_pred HHHHHHHhCCceeEEEEechhhHHHHHHHHhcc
Q 020663 48 CTKTMIYLNLVKQWLARHSAGALVAVNSYFEAP 80 (323)
Q Consensus 48 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P 80 (323)
+.+.++..|++.-.|.|-|+|+.++..+|..+.
T Consensus 29 Vl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 29 VLKALEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 566667778888999999999999999998643
No 244
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=67.17 E-value=8.6 Score=29.77 Aligned_cols=30 Identities=27% Similarity=0.242 Sum_probs=23.4
Q ss_pred HHHHHhCCceeEEEEechhhHHHHHHHHhc
Q 020663 50 KTMIYLNLVKQWLARHSAGALVAVNSYFEA 79 (323)
Q Consensus 50 ~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 79 (323)
+.++..++..-.++|-|.||.+|..++..+
T Consensus 19 ~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 19 KALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 334445777778999999999999999753
No 245
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=66.78 E-value=9.5 Score=30.44 Aligned_cols=29 Identities=24% Similarity=0.154 Sum_probs=22.8
Q ss_pred HHHHhCCceeEEEEechhhHHHHHHHHhc
Q 020663 51 TMIYLNLVKQWLARHSAGALVAVNSYFEA 79 (323)
Q Consensus 51 ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 79 (323)
.++..+++.-.++|-|.|+.+|..+|...
T Consensus 21 aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 21 ALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 33445777677999999999999999754
No 246
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=65.81 E-value=15 Score=33.16 Aligned_cols=48 Identities=17% Similarity=0.135 Sum_probs=38.9
Q ss_pred HHHHHHh-C--CceeEEEEechhhHHHHHHHHhcccccceeeeecCCCCcc
Q 020663 49 TKTMIYL-N--LVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAILAP 96 (323)
Q Consensus 49 ~~ll~~l-~--~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~~~ 96 (323)
.++++.. | .++-+..|.|-||..++..|.+||+.+++++.-+|.....
T Consensus 103 K~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~~ 153 (474)
T PF07519_consen 103 KALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINWT 153 (474)
T ss_pred HHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHHH
Confidence 4445443 3 3567899999999999999999999999999999985543
No 247
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=63.59 E-value=8.1 Score=35.38 Aligned_cols=31 Identities=13% Similarity=-0.060 Sum_probs=26.1
Q ss_pred HHHH-HHhCCceeEEEEechhhHHHHHHHHhc
Q 020663 49 TKTM-IYLNLVKQWLARHSAGALVAVNSYFEA 79 (323)
Q Consensus 49 ~~ll-~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 79 (323)
.+++ +..|+++-.++|||+|=+.|+..|.-.
T Consensus 255 a~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3445 578999999999999999999988765
No 248
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=62.04 E-value=14 Score=28.21 Aligned_cols=32 Identities=19% Similarity=0.086 Sum_probs=24.1
Q ss_pred HHHHHhCCceeEEEEechhhHHHHHHHHhccc
Q 020663 50 KTMIYLNLVKQWLARHSAGALVAVNSYFEAPE 81 (323)
Q Consensus 50 ~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~ 81 (323)
..++..++..-.++|-|.|+.+|..++...+.
T Consensus 20 ~~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~~ 51 (175)
T cd07228 20 RALEEEGIEIDIIAGSSIGALVGALYAAGHLD 51 (175)
T ss_pred HHHHHCCCCeeEEEEeCHHHHHHHHHHcCCCH
Confidence 33345566666789999999999999986543
No 249
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=60.81 E-value=7.3 Score=34.55 Aligned_cols=33 Identities=27% Similarity=0.331 Sum_probs=25.9
Q ss_pred HhCCceeEEEEechhhHHHHHHHHhccccccee
Q 020663 54 YLNLVKQWLARHSAGALVAVNSYFEAPERVAAL 86 (323)
Q Consensus 54 ~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~l 86 (323)
..|+.+-++.|-|.|+.+|..+|...++.+..+
T Consensus 97 E~gl~p~vIsGTSaGAivAal~as~~~eel~~~ 129 (421)
T cd07230 97 EANLLPRIISGSSAGSIVAAILCTHTDEEIPEL 129 (421)
T ss_pred HcCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 346666689999999999999999777665443
No 250
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=59.21 E-value=14 Score=29.23 Aligned_cols=32 Identities=16% Similarity=0.095 Sum_probs=24.9
Q ss_pred HHHHHHhCCceeEEEEechhhHHHHHHHHhcc
Q 020663 49 TKTMIYLNLVKQWLARHSAGALVAVNSYFEAP 80 (323)
Q Consensus 49 ~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P 80 (323)
...++..++..-.+.|.|.|+.+|..+|...+
T Consensus 17 l~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 17 LKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 34444557766678999999999999998765
No 251
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=58.34 E-value=9 Score=32.30 Aligned_cols=38 Identities=16% Similarity=0.188 Sum_probs=27.2
Q ss_pred HHHHHHHhCCceeEEEEechhhHHHHHHHHhccccccee
Q 020663 48 CTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERVAAL 86 (323)
Q Consensus 48 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~l 86 (323)
+.++.+ .|+.+-++.|-|.|+.+|..++...++.+..+
T Consensus 87 lkaL~e-~gl~p~~i~GsSaGAivaa~~~~~t~~El~~~ 124 (323)
T cd07231 87 VRTLVE-HQLLPRVIAGSSVGSIVCAIIATRTDEELQSF 124 (323)
T ss_pred HHHHHH-cCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 333333 47777789999999999999998655554443
No 252
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=57.15 E-value=9.6 Score=33.27 Aligned_cols=40 Identities=18% Similarity=0.231 Sum_probs=29.8
Q ss_pred HHHHHHhCCceeEEEEechhhHHHHHHHHhcccccceeee
Q 020663 49 TKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERVAALIL 88 (323)
Q Consensus 49 ~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil 88 (323)
...+...|+.+=++.|-|.|+.+|..+|...++.+..+..
T Consensus 102 ~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l~ 141 (391)
T cd07229 102 VKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRFLD 141 (391)
T ss_pred HHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHHHh
Confidence 3334445777778999999999999999976666655543
No 253
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=57.10 E-value=9.3 Score=33.72 Aligned_cols=41 Identities=22% Similarity=0.284 Sum_probs=29.9
Q ss_pred chHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccccceee
Q 020663 46 GCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERVAALI 87 (323)
Q Consensus 46 ~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~li 87 (323)
.-+.++.++ |+.+=++.|-|.|+.+|..+|...++.+..++
T Consensus 84 GVlkaL~e~-gllp~iI~GtSAGAivaalla~~t~~el~~~~ 124 (407)
T cd07232 84 GVVKALLDA-DLLPNVISGTSGGSLVAALLCTRTDEELKQLL 124 (407)
T ss_pred HHHHHHHhC-CCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 334444443 66677899999999999999997776665553
No 254
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=54.64 E-value=23 Score=26.85 Aligned_cols=30 Identities=20% Similarity=0.091 Sum_probs=22.6
Q ss_pred HHHHHhCCceeEEEEechhhHHHHHHHHhc
Q 020663 50 KTMIYLNLVKQWLARHSAGALVAVNSYFEA 79 (323)
Q Consensus 50 ~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 79 (323)
..++..++..-.++|-|.|+.+|..++...
T Consensus 20 ~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 20 KALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 334445666667899999999999999653
No 255
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=53.08 E-value=44 Score=28.79 Aligned_cols=65 Identities=15% Similarity=0.224 Sum_probs=50.5
Q ss_pred CCCCEEEEecCCCCCCCchHHHHHHhhCC----CcEEEEcCCCCCCcccc-ChHHHHHHHHHHHHHhcCC
Q 020663 247 ISCPVLIVTGDTDRIVPSWNAERLSRAIP----GSTFEVIKNCGHVPQEE-KVEEFVSIVARFLQRAFGY 311 (323)
Q Consensus 247 i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~~~~~ 311 (323)
...+.+.+.+..|.++|....+++.+... +++-+-+.++-|..+.. .|..+.+...+|++.....
T Consensus 224 ~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~ 293 (350)
T KOG2521|consen 224 LPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISS 293 (350)
T ss_pred ccccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhcccc
Confidence 35788999999999999888877755432 35555667889988665 4999999999999987643
No 256
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=52.55 E-value=18 Score=33.42 Aligned_cols=60 Identities=17% Similarity=0.055 Sum_probs=40.8
Q ss_pred CccchhhhchHHHHHHH---hCC--ceeEEEEechhhHHHHHHHHh--cccccceeeeecCCCCcch
Q 020663 38 SINSFRHFGCCTKTMIY---LNL--VKQWLARHSAGALVAVNSYFE--APERVAALILIAPAILAPR 97 (323)
Q Consensus 38 ~~~~~~~~~dl~~ll~~---l~~--~~~~lvGhS~Gg~ia~~~a~~--~P~~v~~lil~~~~~~~~~ 97 (323)
+....|....+.-+-++ .|. +++.|+|||.||..+..+... ....+.+.|..++....+.
T Consensus 170 N~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~~~~ 236 (545)
T KOG1516|consen 170 NLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNALSPW 236 (545)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccccch
Confidence 44455555555444444 453 579999999999999887753 2357888888888765543
No 257
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=50.31 E-value=23 Score=27.76 Aligned_cols=52 Identities=8% Similarity=-0.022 Sum_probs=38.7
Q ss_pred CCccchhhhchHHHHHHHhCCceeEEEEech----hhHHHHHHHHhcc-cccceeeee
Q 020663 37 PSINSFRHFGCCTKTMIYLNLVKQWLARHSA----GALVAVNSYFEAP-ERVAALILI 89 (323)
Q Consensus 37 ~~~~~~~~~~dl~~ll~~l~~~~~~lvGhS~----Gg~ia~~~a~~~P-~~v~~lil~ 89 (323)
..++.+.+++.+.++++..+ ..++|+|||. |..++-.+|.+.- ..+..++-+
T Consensus 89 ~~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 89 AGADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred cCCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 34557788888999888877 6789999998 8899999988742 244444444
No 258
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=49.44 E-value=26 Score=28.78 Aligned_cols=32 Identities=22% Similarity=0.141 Sum_probs=23.5
Q ss_pred HHHHhCCc-eeEEEEechhhHHHHHHHHhcccc
Q 020663 51 TMIYLNLV-KQWLARHSAGALVAVNSYFEAPER 82 (323)
Q Consensus 51 ll~~l~~~-~~~lvGhS~Gg~ia~~~a~~~P~~ 82 (323)
.+...++. -=.++|.|.|+.+|..++...+.+
T Consensus 19 al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~~ 51 (266)
T cd07208 19 AFLEAGIRPFDLVIGVSAGALNAASYLSGQRGR 51 (266)
T ss_pred HHHHcCCCCCCEEEEECHHHHhHHHHHhCCcch
Confidence 33444555 346899999999999999876543
No 259
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=48.04 E-value=29 Score=27.98 Aligned_cols=32 Identities=28% Similarity=0.190 Sum_probs=23.4
Q ss_pred HHHHHHhCCc--eeEEEEechhhHHHHHHHHhcc
Q 020663 49 TKTMIYLNLV--KQWLARHSAGALVAVNSYFEAP 80 (323)
Q Consensus 49 ~~ll~~l~~~--~~~lvGhS~Gg~ia~~~a~~~P 80 (323)
.+.+...|+. .-.++|-|.|+.+|..++...+
T Consensus 18 l~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 18 LSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 3344445665 3479999999999999998654
No 260
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=47.86 E-value=27 Score=29.65 Aligned_cols=32 Identities=16% Similarity=0.003 Sum_probs=21.7
Q ss_pred HHHHHHHhCCc---eeE-EEEechhhHHHHHHHHhc
Q 020663 48 CTKTMIYLNLV---KQW-LARHSAGALVAVNSYFEA 79 (323)
Q Consensus 48 l~~ll~~l~~~---~~~-lvGhS~Gg~ia~~~a~~~ 79 (323)
|.++-+.+|.+ .+. +.|.|+||.+|..++..+
T Consensus 18 L~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 18 LIAIEKALGRPIRELFDWIAGTSTGGILALALLHGK 53 (312)
T ss_pred HHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcCC
Confidence 34444445642 244 789999999999999643
No 261
>PLN02209 serine carboxypeptidase
Probab=43.97 E-value=27 Score=31.27 Aligned_cols=51 Identities=10% Similarity=0.038 Sum_probs=34.9
Q ss_pred hhchHHHHHHHh-------CCceeEEEEechhhHHHHHHHHhc----------ccccceeeeecCCCC
Q 020663 44 HFGCCTKTMIYL-------NLVKQWLARHSAGALVAVNSYFEA----------PERVAALILIAPAIL 94 (323)
Q Consensus 44 ~~~dl~~ll~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~----------P~~v~~lil~~~~~~ 94 (323)
.++|+.+++..+ .-.+++|.|.|+||..+-.+|... +-.++++++.++...
T Consensus 146 ~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td 213 (437)
T PLN02209 146 EVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITH 213 (437)
T ss_pred HHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccC
Confidence 345666666552 235799999999999877777642 125778888887543
No 262
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=42.80 E-value=25 Score=31.61 Aligned_cols=40 Identities=15% Similarity=0.121 Sum_probs=30.6
Q ss_pred ceeEEEEechhhHHHHHHHHhccc---ccceeeeecCCCCcch
Q 020663 58 VKQWLARHSAGALVAVNSYFEAPE---RVAALILIAPAILAPR 97 (323)
Q Consensus 58 ~~~~lvGhS~Gg~ia~~~a~~~P~---~v~~lil~~~~~~~~~ 97 (323)
.+.+|+|-|+||.-+-.+|...-+ ..++++++.+......
T Consensus 198 ~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng 240 (498)
T COG2939 198 SPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNG 240 (498)
T ss_pred CceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCC
Confidence 489999999999999999986544 3677777777644433
No 263
>KOG1578 consensus Predicted carbonic anhydrase involved in protection against oxidative damage [Inorganic ion transport and metabolism]
Probab=42.73 E-value=24 Score=28.77 Aligned_cols=49 Identities=12% Similarity=0.032 Sum_probs=34.6
Q ss_pred hhhhhccCCCccchhhh---chHHHHHHHhCCceeEEEEechhhHHHHHHHH
Q 020663 29 WIIICAICPSINSFRHF---GCCTKTMIYLNLVKQWLARHSAGALVAVNSYF 77 (323)
Q Consensus 29 ~~~~~~~~~~~~~~~~~---~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~ 77 (323)
|..+.+..|.....+.. +-++..+..+++++++++|||.-|.++..+.-
T Consensus 122 irniaNlv~p~~~~~~~~~~AalE~aV~~lkvenIiv~ghs~cgGik~~m~~ 173 (276)
T KOG1578|consen 122 IRNIANLVPPPDKSKPTNVGAALEYAVTTLKVENIIVIGHSLCGGIKGLMSF 173 (276)
T ss_pred HHHHHhccCcccccCcccccchHHHHHHHhccceEEEeccccCCchhhcccc
Confidence 33455555544333333 67888999999999999999998888766553
No 264
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=42.45 E-value=34 Score=28.70 Aligned_cols=37 Identities=24% Similarity=0.234 Sum_probs=26.1
Q ss_pred chHHHHHHHhCCceeEEEEechhhHHHHHHHHhccccc
Q 020663 46 GCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERV 83 (323)
Q Consensus 46 ~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v 83 (323)
.-+.++.+ .++.+-++.|.|.|+.+|..++....+.+
T Consensus 86 Gvl~aL~e-~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 86 GVVKALWE-QDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HHHHHHHH-cCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 33444443 45666679999999999999998654444
No 265
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=41.70 E-value=43 Score=27.17 Aligned_cols=20 Identities=35% Similarity=0.332 Sum_probs=18.0
Q ss_pred EEEEechhhHHHHHHHHhcc
Q 020663 61 WLARHSAGALVAVNSYFEAP 80 (323)
Q Consensus 61 ~lvGhS~Gg~ia~~~a~~~P 80 (323)
.++|-|.|+.+|..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 79999999999999998754
No 266
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=41.29 E-value=1.3e+02 Score=24.93 Aligned_cols=59 Identities=17% Similarity=0.271 Sum_probs=40.3
Q ss_pred hccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCC-CCCCc-cccChHHHHHHHHHHHHHh
Q 020663 244 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKN-CGHVP-QEEKVEEFVSIVARFLQRA 308 (323)
Q Consensus 244 l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~-~gH~~-~~e~p~~~~~~i~~fl~~~ 308 (323)
.....+||.++.|++ ...++..+.+|+++.+.++. -|++. ..-.|+++.+.|.+=.++.
T Consensus 143 Ag~~gVPV~lVsGDd------~~~~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~aa~~A 203 (270)
T cd08769 143 AGEFGVPVVLVAGDS------ELEKEVKEETPWAVFVPTKESLSRYSAKSPSMKKVKEELREAVKEA 203 (270)
T ss_pred HhhcCCCEEEEecCH------HHHHHHHHhCCCceEEEEeeecCCCccccCCHHHHHHHHHHHHHHH
Confidence 356789999999965 34566777789988888864 45433 3445677777666665444
No 267
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=40.72 E-value=33 Score=31.68 Aligned_cols=38 Identities=13% Similarity=0.156 Sum_probs=30.3
Q ss_pred eEEEEechhhHHHHHHHHhcc-cccceeeeecCCCCcch
Q 020663 60 QWLARHSAGALVAVNSYFEAP-ERVAALILIAPAILAPR 97 (323)
Q Consensus 60 ~~lvGhS~Gg~ia~~~a~~~P-~~v~~lil~~~~~~~~~ 97 (323)
++--+.|-||.-++..|.+.- ..|++++...|.+..+.
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~~~~ 325 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVNLPP 325 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCccCCCC
Confidence 445689999999999998744 47999999998766553
No 268
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=40.24 E-value=37 Score=28.14 Aligned_cols=55 Identities=20% Similarity=0.260 Sum_probs=36.3
Q ss_pred hhhchHHHHHHHhCC---ceeEEEEechhhHHHHHHHH---hcccccceeeeecCCCCcch
Q 020663 43 RHFGCCTKTMIYLNL---VKQWLARHSAGALVAVNSYF---EAPERVAALILIAPAILAPR 97 (323)
Q Consensus 43 ~~~~dl~~ll~~l~~---~~~~lvGhS~Gg~ia~~~a~---~~P~~v~~lil~~~~~~~~~ 97 (323)
.+.+.+.+-++.+.- .|++|.|-|+|+.-+...-. ..-+++.+.++.+|+...+.
T Consensus 91 aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s~~ 151 (289)
T PF10081_consen 91 ALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFSPL 151 (289)
T ss_pred HHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCChh
Confidence 344444444555532 47999999999887665433 23357999999998765443
No 269
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=39.58 E-value=34 Score=30.56 Aligned_cols=48 Identities=10% Similarity=0.049 Sum_probs=33.2
Q ss_pred chHHHHHHHh-------CCceeEEEEechhhHHHHHHHHhc----------ccccceeeeecCCC
Q 020663 46 GCCTKTMIYL-------NLVKQWLARHSAGALVAVNSYFEA----------PERVAALILIAPAI 93 (323)
Q Consensus 46 ~dl~~ll~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~----------P~~v~~lil~~~~~ 93 (323)
+++..++... .-.+++|.|.|+||..+-.+|... +-.++|+++-+|..
T Consensus 146 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t 210 (433)
T PLN03016 146 KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVT 210 (433)
T ss_pred HHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCc
Confidence 4555555442 336799999999999887777642 12578888888754
No 270
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=39.41 E-value=6.8 Score=34.14 Aligned_cols=61 Identities=16% Similarity=0.098 Sum_probs=38.6
Q ss_pred hccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccC-----hHHHHHHHHHHHH
Q 020663 244 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEK-----VEEFVSIVARFLQ 306 (323)
Q Consensus 244 l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~-----p~~~~~~i~~fl~ 306 (323)
++.-.-.+++|+|++|+..-... .+.+.-.++.+.+.||++|...+.. .++....|.+|-.
T Consensus 347 vr~~~~rmlFVYG~nDPW~A~~f--~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 347 VRNNGPRMLFVYGENDPWSAEPF--RLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred HHhCCCeEEEEeCCCCCcccCcc--ccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 34445679999999999864321 1222234678888999999865443 3445555666643
No 271
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=39.34 E-value=41 Score=30.33 Aligned_cols=31 Identities=13% Similarity=0.315 Sum_probs=25.3
Q ss_pred cEEEEcCCCCCCccccChHHHHHHHHHHHHHh
Q 020663 277 STFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 308 (323)
Q Consensus 277 ~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 308 (323)
....+++ +||++..++|+...+.+..|+...
T Consensus 461 ~~~r~y~-aGHMvp~d~P~~~~~~~~~~~~~~ 491 (498)
T COG2939 461 TFLRIYE-AGHMVPYDRPESSLEMVNLWINGY 491 (498)
T ss_pred eEEEEec-CcceeecCChHHHHHHHHHHHhhc
Confidence 3445554 799999999999999999998763
No 272
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=38.98 E-value=53 Score=27.94 Aligned_cols=49 Identities=10% Similarity=0.040 Sum_probs=33.7
Q ss_pred hchHHHHHHH----h---CCceeEEEEechhhHHHHHHHHhc----------ccccceeeeecCCC
Q 020663 45 FGCCTKTMIY----L---NLVKQWLARHSAGALVAVNSYFEA----------PERVAALILIAPAI 93 (323)
Q Consensus 45 ~~dl~~ll~~----l---~~~~~~lvGhS~Gg~ia~~~a~~~----------P~~v~~lil~~~~~ 93 (323)
++|+..++.. . .-.+++|.|-|+||..+-.+|... +-.++|+++-+|..
T Consensus 31 a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t 96 (319)
T PLN02213 31 VKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVT 96 (319)
T ss_pred HHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCC
Confidence 3555555544 2 346899999999999888877642 12577888888754
No 273
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=36.91 E-value=21 Score=29.38 Aligned_cols=21 Identities=19% Similarity=0.216 Sum_probs=15.0
Q ss_pred HHHHHh-CCceeEEEEechhhH
Q 020663 50 KTMIYL-NLVKQWLARHSAGAL 70 (323)
Q Consensus 50 ~ll~~l-~~~~~~lvGhS~Gg~ 70 (323)
.+++.+ .+..++++|||+|..
T Consensus 226 ~~~~~l~~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 226 SFFESLSDIDEIIIYGHSLGEV 247 (270)
T ss_pred HHHhhhcCCCEEEEEeCCCchh
Confidence 334443 357899999999975
No 274
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=36.73 E-value=37 Score=27.60 Aligned_cols=22 Identities=45% Similarity=0.548 Sum_probs=17.8
Q ss_pred EEEEechhhHHHHHHHHhccccc
Q 020663 61 WLARHSAGALVAVNSYFEAPERV 83 (323)
Q Consensus 61 ~lvGhS~Gg~ia~~~a~~~P~~v 83 (323)
.+.|-|.|+.+|..++. .|+++
T Consensus 34 ~i~GtSaGAl~aa~~a~-~~~~~ 55 (246)
T cd07222 34 RFAGASAGSLVAAVLLT-APEKI 55 (246)
T ss_pred EEEEECHHHHHHHHHhc-ChHHH
Confidence 68999999999999984 34443
No 275
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=35.35 E-value=59 Score=26.45 Aligned_cols=20 Identities=35% Similarity=0.386 Sum_probs=17.5
Q ss_pred EEEEechhhHHHHHHHHhcc
Q 020663 61 WLARHSAGALVAVNSYFEAP 80 (323)
Q Consensus 61 ~lvGhS~Gg~ia~~~a~~~P 80 (323)
.+.|-|.|+.+|..+|...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999998644
No 276
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=35.22 E-value=63 Score=24.00 Aligned_cols=19 Identities=42% Similarity=0.538 Sum_probs=16.4
Q ss_pred ceeEEEEechhhHHHHHHH
Q 020663 58 VKQWLARHSAGALVAVNSY 76 (323)
Q Consensus 58 ~~~~lvGhS~Gg~ia~~~a 76 (323)
.--++.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 4456889999999999999
No 277
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=34.86 E-value=40 Score=28.52 Aligned_cols=22 Identities=23% Similarity=0.271 Sum_probs=19.2
Q ss_pred CCceeEEEEechhhHHHHHHHH
Q 020663 56 NLVKQWLARHSAGALVAVNSYF 77 (323)
Q Consensus 56 ~~~~~~lvGhS~Gg~ia~~~a~ 77 (323)
+.++..+.|||+|=+.|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4678899999999999998876
No 278
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=33.73 E-value=67 Score=26.28 Aligned_cols=34 Identities=24% Similarity=0.093 Sum_probs=23.7
Q ss_pred chHHHHHHHhCCc----eeEEEEechhhHHHHHHHHhcc
Q 020663 46 GCCTKTMIYLNLV----KQWLARHSAGALVAVNSYFEAP 80 (323)
Q Consensus 46 ~dl~~ll~~l~~~----~~~lvGhS~Gg~ia~~~a~~~P 80 (323)
.-+..+.++ +.+ .-.++|-|.|+.++..++...+
T Consensus 17 GVl~aL~e~-~~~l~~~~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 17 GVTRCLSER-APHLLRDARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred HHHHHHHHh-CcchhccCCEEEEEcHHHHHHHHHHhCCC
Confidence 334444454 432 3458999999999999998655
No 279
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=33.23 E-value=59 Score=25.05 Aligned_cols=33 Identities=9% Similarity=-0.044 Sum_probs=25.9
Q ss_pred hhchHHHHHHHhCCceeEEEEechhhHHHHHHH
Q 020663 44 HFGCCTKTMIYLNLVKQWLARHSAGALVAVNSY 76 (323)
Q Consensus 44 ~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a 76 (323)
....++--+..|+++.++++|||-=|++...+.
T Consensus 67 ~~asleyAv~~L~v~~IvV~GHs~CGav~a~~~ 99 (182)
T cd00883 67 CLSVLQYAVDVLKVKHIIVCGHYGCGGVKAALT 99 (182)
T ss_pred hhhhHHHHHHhcCCCEEEEecCCCchHHHHHHc
Confidence 345566667789999999999999888777653
No 280
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=32.92 E-value=49 Score=23.40 Aligned_cols=30 Identities=10% Similarity=0.065 Sum_probs=23.6
Q ss_pred hhchHHHHHHHhCCceeEEEEechhhHHHH
Q 020663 44 HFGCCTKTMIYLNLVKQWLARHSAGALVAV 73 (323)
Q Consensus 44 ~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~ 73 (323)
....+.-.+..++++.++++||+--|++..
T Consensus 45 ~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 45 VLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred HHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 445566677889999999999988776665
No 281
>PRK15219 carbonic anhydrase; Provisional
Probab=32.47 E-value=44 Score=27.17 Aligned_cols=34 Identities=12% Similarity=-0.079 Sum_probs=26.4
Q ss_pred hhchHHHHHHHhCCceeEEEEechhhHHHHHHHH
Q 020663 44 HFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYF 77 (323)
Q Consensus 44 ~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~ 77 (323)
....|+--+..|+++.++++|||-=|.+...+..
T Consensus 129 ~~~slEyAv~~L~v~~IvVlGHt~CGav~Aa~~~ 162 (245)
T PRK15219 129 LLGSMEFACAVAGAKVVLVMGHTACGAVKGAIDN 162 (245)
T ss_pred hhhHHHHHHHHcCCCEEEEecCCcchHHHHHHhc
Confidence 4455666778899999999999998887766543
No 282
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=32.24 E-value=69 Score=26.15 Aligned_cols=34 Identities=21% Similarity=0.069 Sum_probs=23.5
Q ss_pred chHHHHHHHhCCc----eeEEEEechhhHHHHHHHHhcc
Q 020663 46 GCCTKTMIYLNLV----KQWLARHSAGALVAVNSYFEAP 80 (323)
Q Consensus 46 ~dl~~ll~~l~~~----~~~lvGhS~Gg~ia~~~a~~~P 80 (323)
.-+..++++ +.. .-.+.|-|.|+.+|..++...+
T Consensus 21 GVl~~L~e~-g~~l~~~~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 21 GVASCLLEH-APFLVANARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred HHHHHHHhc-CCcccccCCeEEEEcHHHHHHHHHHcCCC
Confidence 334444444 432 3458999999999999998654
No 283
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=31.37 E-value=49 Score=27.17 Aligned_cols=42 Identities=21% Similarity=0.063 Sum_probs=30.3
Q ss_pred chHHHHHHHhCCceeE-EEEechhhHHHHHHHHhcccccceeee
Q 020663 46 GCCTKTMIYLNLVKQW-LARHSAGALVAVNSYFEAPERVAALIL 88 (323)
Q Consensus 46 ~dl~~ll~~l~~~~~~-lvGhS~Gg~ia~~~a~~~P~~v~~lil 88 (323)
.-|.++++.-. .++. ++|.|+|+.-+..+.+.-|.+-++++.
T Consensus 28 GVLD~fl~a~~-~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~~ 70 (292)
T COG4667 28 GVLDEFLRANF-NPFDLVVGVSAGALNLVAYLSKQRGRARRVIV 70 (292)
T ss_pred HHHHHHHHhcc-CCcCeeeeecHhHHhHHHHhhcCCchHHHHHH
Confidence 34555554433 3444 799999999999999998887666654
No 284
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=30.92 E-value=48 Score=28.53 Aligned_cols=29 Identities=14% Similarity=-0.123 Sum_probs=20.3
Q ss_pred HHHHHhCCce------eEEEEechhhHHHHHHHHh
Q 020663 50 KTMIYLNLVK------QWLARHSAGALVAVNSYFE 78 (323)
Q Consensus 50 ~ll~~l~~~~------~~lvGhS~Gg~ia~~~a~~ 78 (323)
+++...|+.+ -.++|||+|=+.|+.++..
T Consensus 110 ~~l~~~g~~~~~~~~~~~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 110 EKLRARDGGQAVIDSVDVCAGLSLGEYTALVFAGA 144 (343)
T ss_pred HHHHhcCCCcccccCCCeeeeccHHHHHHHHHhCC
Confidence 3445555432 3579999999999988854
No 285
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.72 E-value=36 Score=25.55 Aligned_cols=35 Identities=20% Similarity=0.051 Sum_probs=28.2
Q ss_pred ceeEEEEechhhHHHHHHHHhcccccceeeeecCCCC
Q 020663 58 VKQWLARHSAGALVAVNSYFEAPERVAALILIAPAIL 94 (323)
Q Consensus 58 ~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~ 94 (323)
+.+-||++|||-.+|-++....+ +++.+.+++...
T Consensus 57 ~hirlvAwSMGVwvAeR~lqg~~--lksatAiNGTgL 91 (214)
T COG2830 57 RHIRLVAWSMGVWVAERVLQGIR--LKSATAINGTGL 91 (214)
T ss_pred hhhhhhhhhHHHHHHHHHHhhcc--ccceeeecCCCC
Confidence 56789999999999999887765 777788887644
No 286
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=30.48 E-value=43 Score=28.33 Aligned_cols=53 Identities=13% Similarity=0.002 Sum_probs=38.7
Q ss_pred chhhhchHHHHHHHh-------CCceeEEEEechhhHHHHHHHHhccc---------ccceeeeecCCC
Q 020663 41 SFRHFGCCTKTMIYL-------NLVKQWLARHSAGALVAVNSYFEAPE---------RVAALILIAPAI 93 (323)
Q Consensus 41 ~~~~~~dl~~ll~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~P~---------~v~~lil~~~~~ 93 (323)
....+.|+.++++.+ +..+++|+.-|+||-+|..++...-+ .+.+++|-++=+
T Consensus 98 ~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWI 166 (414)
T KOG1283|consen 98 NKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWI 166 (414)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCccc
Confidence 346778888888774 34589999999999999998875322 456667666543
No 287
>PLN03006 carbonate dehydratase
Probab=29.62 E-value=69 Score=26.93 Aligned_cols=31 Identities=13% Similarity=-0.025 Sum_probs=25.1
Q ss_pred hchHHHHHHHhCCceeEEEEechhhHHHHHH
Q 020663 45 FGCCTKTMIYLNLVKQWLARHSAGALVAVNS 75 (323)
Q Consensus 45 ~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~ 75 (323)
..-|+--+.+|+++.++|+|||-=|.+...+
T Consensus 159 ~aSLEYAV~~L~V~~IVV~GHs~CGaV~Aal 189 (301)
T PLN03006 159 KAALEFSVNTLNVENILVIGHSRCGGIQALM 189 (301)
T ss_pred hhhHHHHHHHhCCCEEEEecCCCchHHHHHh
Confidence 4567777888999999999999988777433
No 288
>KOG1907 consensus Phosphoribosylformylglycinamidine synthase [Nucleotide transport and metabolism]
Probab=29.49 E-value=50 Score=32.17 Aligned_cols=56 Identities=20% Similarity=0.196 Sum_probs=44.1
Q ss_pred cccchhhhhhccCCCccchhhhchHHHHHHHhCCceeEEEEe--chhhHHHHHHHHhc
Q 020663 24 PFHSNWIIICAICPSINSFRHFGCCTKTMIYLNLVKQWLARH--SAGALVAVNSYFEA 79 (323)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~dl~~ll~~l~~~~~~lvGh--S~Gg~ia~~~a~~~ 79 (323)
.+.+.+..+.++||+++-.+...-+.+++.+|-.+.+++.|| |=||.+...+-..+
T Consensus 859 aLaQvy~QiG~d~Pdl~~~~~lk~~f~~vqqL~~~~ii~AgHD~SDGGLlvt~lEMAf 916 (1320)
T KOG1907|consen 859 ALAQVYSQIGDDCPDLDNFDELKKFFSVVQQLLNEGIILAGHDISDGGLLVTLLEMAF 916 (1320)
T ss_pred HHHHHHHHhCCCCCCccchHHHHHHHHHHHHHHhcCceeecccccCCchhHHHHHHHh
Confidence 445677889999999999888888888888876688999999 56888876654443
No 289
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=29.49 E-value=68 Score=30.87 Aligned_cols=37 Identities=16% Similarity=0.165 Sum_probs=25.5
Q ss_pred chhhhchHHHHHH---HhCCceeEEEEechhhHHHHHHHH
Q 020663 41 SFRHFGCCTKTMI---YLNLVKQWLARHSAGALVAVNSYF 77 (323)
Q Consensus 41 ~~~~~~dl~~ll~---~l~~~~~~lvGhS~Gg~ia~~~a~ 77 (323)
......++.+.++ ..++.--++.|.|+||.++..+|.
T Consensus 46 ~~~~Y~~l~~~l~~~~~~~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 46 TEAVYGALLELLGAHLRLRVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred chhHHHHHHHHhhhhhccCCCCceEEeeCHHHHHHHHHHc
Confidence 3344444555554 335555678999999999999996
No 290
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=28.43 E-value=54 Score=36.62 Aligned_cols=31 Identities=23% Similarity=0.064 Sum_probs=25.3
Q ss_pred HHHHHHHhCCceeEEEEechhhHHHHHHHHh
Q 020663 48 CTKTMIYLNLVKQWLARHSAGALVAVNSYFE 78 (323)
Q Consensus 48 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~ 78 (323)
+..+++.+|+++-.++|||+|=+.|+.+|..
T Consensus 664 l~~lL~~~Gi~Pd~v~GHSlGE~aAa~aAGv 694 (2582)
T TIGR02813 664 QYKLFTQAGFKADMTAGHSFGELSALCAAGV 694 (2582)
T ss_pred HHHHHHHcCCccceeecCCHHHHHHHHHhCC
Confidence 3456677899999999999999999887743
No 291
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=28.29 E-value=1.6e+02 Score=19.01 Aligned_cols=38 Identities=13% Similarity=-0.111 Sum_probs=24.6
Q ss_pred hhhchHHHHHHH----hCCceeEEEEechhhHHHHHHHHhcc
Q 020663 43 RHFGCCTKTMIY----LNLVKQWLARHSAGALVAVNSYFEAP 80 (323)
Q Consensus 43 ~~~~dl~~ll~~----l~~~~~~lvGhS~Gg~ia~~~a~~~P 80 (323)
..+++..+.++. -|-+++-++|-|.|=.+|.+.+..+-
T Consensus 21 ~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 21 RNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp HHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhc
Confidence 344444444444 24468889999999999988887753
No 292
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=28.05 E-value=57 Score=25.77 Aligned_cols=35 Identities=9% Similarity=-0.028 Sum_probs=28.3
Q ss_pred hhhchHHHHHHHhCCceeEEEEechhhHHHHHHHH
Q 020663 43 RHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYF 77 (323)
Q Consensus 43 ~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~ 77 (323)
+....+.-.+..|+++.++++||+-=|++...+..
T Consensus 77 ~~l~sleyAv~~L~v~~IiV~GH~~CGav~aa~~~ 111 (207)
T COG0288 77 SVLRSLEYAVYVLGVKEIIVCGHTDCGAVKAALDD 111 (207)
T ss_pred chhHHHHHHHHHcCCCEEEEecCCCcHHHHhcccc
Confidence 45566777788899999999999998888776554
No 293
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=27.79 E-value=2.2e+02 Score=21.42 Aligned_cols=59 Identities=14% Similarity=0.258 Sum_probs=37.4
Q ss_pred CCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHHH
Q 020663 249 CPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQR 307 (323)
Q Consensus 249 ~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 307 (323)
..++++..--|.-.+...++++.+.+.+.++.+|-.+|..+--+..+.+.+.+..++.+
T Consensus 40 yD~i~lG~w~d~G~~d~~~~~fl~~l~~KkV~lF~T~G~~~~s~~~~~~~~~~~~~~~~ 98 (160)
T PF12641_consen 40 YDLIFLGFWIDKGTPDKDMKEFLKKLKGKKVALFGTAGAGPDSEYAKKILKNVEALLPK 98 (160)
T ss_pred CCEEEEEcCccCCCCCHHHHHHHHHccCCeEEEEEecCCCCchHHHHHHHHHHHHhhcc
Confidence 45666666666666666666666667776777776666665555555566666666543
No 294
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=27.53 E-value=1.1e+02 Score=22.49 Aligned_cols=34 Identities=6% Similarity=0.028 Sum_probs=24.9
Q ss_pred hhhchHHHHHHHhCCceeEEEEechhhHHHHHHH
Q 020663 43 RHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSY 76 (323)
Q Consensus 43 ~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a 76 (323)
+....+.-.+..++++.++++||+-=|++...+.
T Consensus 40 ~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~~ 73 (153)
T PF00484_consen 40 SALASLEYAVYHLGVKEIIVCGHTDCGAIKAALD 73 (153)
T ss_dssp HHHHHHHHHHHTST-SEEEEEEETT-HHHHHHHH
T ss_pred chhhheeeeeecCCCCEEEEEcCCCchHHHHHHh
Confidence 4455566677889999999999999888885544
No 295
>PLN00416 carbonate dehydratase
Probab=26.64 E-value=89 Score=25.69 Aligned_cols=32 Identities=9% Similarity=-0.044 Sum_probs=25.6
Q ss_pred hchHHHHHHHhCCceeEEEEechhhHHHHHHH
Q 020663 45 FGCCTKTMIYLNLVKQWLARHSAGALVAVNSY 76 (323)
Q Consensus 45 ~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a 76 (323)
...|+--+..|+++.++|+|||-=|.+...+.
T Consensus 127 ~asLEyAv~~L~V~~IVV~GHs~CGaV~Aa~~ 158 (258)
T PLN00416 127 GAAVEYAVVHLKVENILVIGHSCCGGIKGLMS 158 (258)
T ss_pred hhHHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 34577777889999999999999888766554
No 296
>cd01014 nicotinamidase_related Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.
Probab=26.16 E-value=1.7e+02 Score=21.65 Aligned_cols=48 Identities=2% Similarity=-0.170 Sum_probs=33.3
Q ss_pred chHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccccceeeeecCCC
Q 020663 46 GCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAI 93 (323)
Q Consensus 46 ~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~ 93 (323)
.++.++++..|++.++++|-+....+..-....+-.-++-.++.+...
T Consensus 88 t~l~~~L~~~gi~~viv~G~~td~CV~~Ta~~a~~~g~~v~vi~Da~~ 135 (155)
T cd01014 88 TDLEEWLREAGIDHLVICGAMTEMCVDTTVRSAFDLGYDVTVVADACA 135 (155)
T ss_pred CCHHHHHHHCCCCEEEEEeeccchhHHHHHHHHHHCCCcEEEeccccc
Confidence 578999999999999999999875554443333323356666666553
No 297
>PRK10437 carbonic anhydrase; Provisional
Probab=25.37 E-value=62 Score=25.83 Aligned_cols=32 Identities=9% Similarity=-0.002 Sum_probs=24.6
Q ss_pred hchHHHHHHHhCCceeEEEEechhhHHHHHHH
Q 020663 45 FGCCTKTMIYLNLVKQWLARHSAGALVAVNSY 76 (323)
Q Consensus 45 ~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a 76 (323)
..-+.--+..|+++.++++||+-=|.+...+.
T Consensus 78 ~~~leyAV~~L~v~~IvV~GHt~CG~V~Aal~ 109 (220)
T PRK10437 78 LSVVQYAVDVLEVEHIIICGHYGCGGVQAAVE 109 (220)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCchHHHHHHc
Confidence 33455556779999999999999888777654
No 298
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=25.31 E-value=1.4e+02 Score=27.87 Aligned_cols=40 Identities=13% Similarity=0.379 Sum_probs=30.6
Q ss_pred CceeEEEEe------chhhHHHHHHHHhcccccceeeeecCCCCcch
Q 020663 57 LVKQWLARH------SAGALVAVNSYFEAPERVAALILIAPAILAPR 97 (323)
Q Consensus 57 ~~~~~lvGh------S~Gg~ia~~~a~~~P~~v~~lil~~~~~~~~~ 97 (323)
.++++++|| +.|+.+++..-+..-.+ .+.+.++|.-..|.
T Consensus 337 ~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~~~~pd 382 (655)
T COG3887 337 SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPEDMSPD 382 (655)
T ss_pred cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECccccChh
Confidence 689999999 78999998866654444 78888897655443
No 299
>COG1582 FlgEa Uncharacterized protein, possibly involved in motility [Cell motility and secretion]
Probab=24.42 E-value=1.6e+02 Score=18.11 Aligned_cols=45 Identities=20% Similarity=0.289 Sum_probs=33.6
Q ss_pred CchHHHHHHhhCCCcEEEEcCCCCCCccccChHHHHHHHHHHHHHhc
Q 020663 263 PSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAF 309 (323)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~ 309 (323)
.+...+. .+.+|+.++..+. +.-++.-|.-+++.+.|.+|-++..
T Consensus 15 N~~~IE~-ie~~PDttItLin-GkkyvVkEsveEVi~kI~~y~rkI~ 59 (67)
T COG1582 15 NAHHIET-IEAFPDTTITLIN-GKKYVVKESVEEVINKIIEYRRKIG 59 (67)
T ss_pred CHHHhhh-hhccCCcEEEEEc-CcEEEEcccHHHHHHHHHHHHHHhh
Confidence 3333343 3566888888884 5778888999999999999988764
No 300
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=24.38 E-value=88 Score=22.90 Aligned_cols=31 Identities=6% Similarity=0.103 Sum_probs=23.4
Q ss_pred hhhchHHHHHHHhCCceeEEEEechhhHHHH
Q 020663 43 RHFGCCTKTMIYLNLVKQWLARHSAGALVAV 73 (323)
Q Consensus 43 ~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~ 73 (323)
+....+.-.+..++.+.++++||+-=|++..
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg~~~a 71 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCGMLTF 71 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCcceEe
Confidence 4455677777889999999999986665543
No 301
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=24.29 E-value=65 Score=27.79 Aligned_cols=17 Identities=18% Similarity=0.302 Sum_probs=15.2
Q ss_pred EEEechhhHHHHHHHHh
Q 020663 62 LARHSAGALVAVNSYFE 78 (323)
Q Consensus 62 lvGhS~Gg~ia~~~a~~ 78 (323)
+.|-|.||.+|..++..
T Consensus 45 IaGTStGgIIAa~la~g 61 (344)
T cd07217 45 VGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEecHHHHHHHHHHcC
Confidence 78999999999999853
No 302
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=24.22 E-value=2.1e+02 Score=24.50 Aligned_cols=47 Identities=11% Similarity=-0.018 Sum_probs=34.2
Q ss_pred chHHHHHHHhCCceeEEEEechhh--HHHHHHHHhcccccceeeeecCC
Q 020663 46 GCCTKTMIYLNLVKQWLARHSAGA--LVAVNSYFEAPERVAALILIAPA 92 (323)
Q Consensus 46 ~dl~~ll~~l~~~~~~lvGhS~Gg--~ia~~~a~~~P~~v~~lil~~~~ 92 (323)
..+..++..+.-.|++|||-|-== -+=..++..+|++|.++.+=+..
T Consensus 266 ~~l~nil~~~p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~IRdvs 314 (373)
T COG4850 266 QSLRNILRRYPDRKFVLVGDSGEHDPEIYAEMVRCFPNRILGIYIRDVS 314 (373)
T ss_pred cHHHHHHHhCCCceEEEecCCCCcCHHHHHHHHHhCccceeeEeeeecc
Confidence 345667788888999999977321 23344566799999999887765
No 303
>PLN03019 carbonic anhydrase
Probab=23.87 E-value=1e+02 Score=26.33 Aligned_cols=32 Identities=13% Similarity=-0.059 Sum_probs=25.8
Q ss_pred hchHHHHHHHhCCceeEEEEechhhHHHHHHH
Q 020663 45 FGCCTKTMIYLNLVKQWLARHSAGALVAVNSY 76 (323)
Q Consensus 45 ~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a 76 (323)
...|+-.+.+|+++.++|+|||-=|.+...+.
T Consensus 202 ~aSIEYAV~~L~V~~IVV~GHs~CGaVkAal~ 233 (330)
T PLN03019 202 GAAIEYAVLHLKVENIVVIGHSACGGIKGLMS 233 (330)
T ss_pred chhHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 45677788889999999999998877766543
No 304
>cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM). This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature.
Probab=23.80 E-value=1.2e+02 Score=24.81 Aligned_cols=49 Identities=6% Similarity=-0.033 Sum_probs=33.6
Q ss_pred hhhchHHHHHHHhCCceeEEEEechhhH---HHHHHHHhcccccceeeeecCC
Q 020663 43 RHFGCCTKTMIYLNLVKQWLARHSAGAL---VAVNSYFEAPERVAALILIAPA 92 (323)
Q Consensus 43 ~~~~dl~~ll~~l~~~~~~lvGhS~Gg~---ia~~~a~~~P~~v~~lil~~~~ 92 (323)
...+++.+.++..|+++.+++.-|..+. ..+..+. .++++.+++.++|.
T Consensus 28 ~~~e~l~~~m~~~gV~~aV~vq~~~~~~~n~~~~~~~~-~~~r~~g~~~~~p~ 79 (263)
T cd01311 28 PGIDDLRALRSTLGIDRVVIVQASIYGADNSNLLDALA-SNGKARGGATVDPR 79 (263)
T ss_pred CCHHHHHHHHHHhCCCcEEEeCccccCCchHHHHHHHh-hCCCeEEEEEECCC
Confidence 3467889999999999999887554222 1222232 45889898888753
No 305
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=23.53 E-value=68 Score=26.81 Aligned_cols=19 Identities=32% Similarity=0.371 Sum_probs=16.5
Q ss_pred EEEEechhhHHHHHHHHhc
Q 020663 61 WLARHSAGALVAVNSYFEA 79 (323)
Q Consensus 61 ~lvGhS~Gg~ia~~~a~~~ 79 (323)
.++|-|.||.+|+.++..+
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 4799999999999998754
No 306
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=23.50 E-value=1.1e+02 Score=23.79 Aligned_cols=33 Identities=9% Similarity=-0.052 Sum_probs=26.0
Q ss_pred hhchHHHHHHHhCCceeEEEEechhhHHHHHHH
Q 020663 44 HFGCCTKTMIYLNLVKQWLARHSAGALVAVNSY 76 (323)
Q Consensus 44 ~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a 76 (323)
....|+--+..|+++.++++|||-=|.+...+.
T Consensus 73 ~~asleyav~~l~v~~ivV~GH~~Cgav~Aa~~ 105 (190)
T cd00884 73 TSAAIEYAVAVLKVEHIVVCGHSDCGGIRALLS 105 (190)
T ss_pred hhhhHHHHHHHhCCCEEEEeCCCcchHHHHHhc
Confidence 345566678889999999999998887776554
No 307
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.31 E-value=1.2e+02 Score=25.65 Aligned_cols=34 Identities=12% Similarity=-0.043 Sum_probs=27.8
Q ss_pred hchHHHHHHHhCC----ceeEEEEec--hhhHHHHHHHHh
Q 020663 45 FGCCTKTMIYLNL----VKQWLARHS--AGALVAVNSYFE 78 (323)
Q Consensus 45 ~~dl~~ll~~l~~----~~~~lvGhS--~Gg~ia~~~a~~ 78 (323)
+..+.+++++.++ +++.++|-| ||..++..+...
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 4668888888764 578999986 999999998865
No 308
>cd01012 YcaC_related YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.
Probab=23.19 E-value=2.6e+02 Score=20.70 Aligned_cols=49 Identities=10% Similarity=-0.065 Sum_probs=35.9
Q ss_pred chHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccccceeeeecCCCC
Q 020663 46 GCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAIL 94 (323)
Q Consensus 46 ~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~~ 94 (323)
.++..+++..|++.+++.|.+.-..+..-....+-.-.+-+++.+....
T Consensus 77 t~L~~~L~~~gi~~lii~G~~T~~CV~~Ta~~a~~~g~~v~v~~Da~as 125 (157)
T cd01012 77 EAFRKALKATGRKQVVLAGLETHVCVLQTALDLLEEGYEVFVVADACGS 125 (157)
T ss_pred HHHHHHHHhcCCCEEEEEEeeccHHHHHHHHHHHHCCCEEEEEeeCCCC
Confidence 3788999999999999999998776665544433345677777776543
No 309
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=23.03 E-value=95 Score=27.98 Aligned_cols=55 Identities=5% Similarity=-0.188 Sum_probs=37.1
Q ss_pred chhhhchHHHHHHH----h---CCceeEEEEechhhHHHHHHHHh----c------ccccceeeeecCCCCc
Q 020663 41 SFRHFGCCTKTMIY----L---NLVKQWLARHSAGALVAVNSYFE----A------PERVAALILIAPAILA 95 (323)
Q Consensus 41 ~~~~~~dl~~ll~~----l---~~~~~~lvGhS~Gg~ia~~~a~~----~------P~~v~~lil~~~~~~~ 95 (323)
...-++|+..++.. . .-++++|.|-|++|...-.+|.. . +-.++|+++-+|....
T Consensus 144 D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~ 215 (454)
T KOG1282|consen 144 DDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDP 215 (454)
T ss_pred cHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccCc
Confidence 34455665555544 2 34689999999999887777764 1 1257888888876543
No 310
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=22.92 E-value=80 Score=26.24 Aligned_cols=26 Identities=19% Similarity=-0.069 Sum_probs=21.1
Q ss_pred HHh-CCceeEEEEechhhHHHHHHHHh
Q 020663 53 IYL-NLVKQWLARHSAGALVAVNSYFE 78 (323)
Q Consensus 53 ~~l-~~~~~~lvGhS~Gg~ia~~~a~~ 78 (323)
+.. ..+++.++|.|-|+..|-.+|..
T Consensus 86 ~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 86 KNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred hccCCcceEEEEecCccHHHHHHHHHH
Confidence 444 34678999999999999999965
No 311
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=22.75 E-value=1.7e+02 Score=21.96 Aligned_cols=48 Identities=8% Similarity=-0.136 Sum_probs=27.1
Q ss_pred hhchHHHHHHHh--CCceeEEEEechhhHHHHHHHHhcccccceeeeecC
Q 020663 44 HFGCCTKTMIYL--NLVKQWLARHSAGALVAVNSYFEAPERVAALILIAP 91 (323)
Q Consensus 44 ~~~dl~~ll~~l--~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~ 91 (323)
.-+++.++++.+ ..+++.+.|-|..|..-+.++...++.|..++=.+|
T Consensus 53 ~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 53 SKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 344555666554 346799999999999999998877777777765554
No 312
>PF10561 UPF0565: Uncharacterised protein family UPF0565; InterPro: IPR018881 This family of proteins has no known function.
Probab=22.67 E-value=97 Score=26.13 Aligned_cols=37 Identities=16% Similarity=0.153 Sum_probs=28.7
Q ss_pred ceeEEEEechhhHHHHHHHHhcc----------------cccceeeeecCCCC
Q 020663 58 VKQWLARHSAGALVAVNSYFEAP----------------ERVAALILIAPAIL 94 (323)
Q Consensus 58 ~~~~lvGhS~Gg~ia~~~a~~~P----------------~~v~~lil~~~~~~ 94 (323)
.+++|+|+|-||.+.-++..... .+|+.+-.++++-.
T Consensus 193 ~~~~LiGFSKGcvVLNqll~El~~~~~~~~~~~~~~~~l~~I~~~~wLD~Gh~ 245 (303)
T PF10561_consen 193 PPLTLIGFSKGCVVLNQLLYELHYLEELARVDKEIERFLSRISDMYWLDGGHN 245 (303)
T ss_pred CceEEEEecCcchHHHHHHHHHHhhhcccCCchHHHHHHHhhheEEEeccCCC
Confidence 47999999999999877765433 36888888888643
No 313
>PLN02347 GMP synthetase
Probab=22.30 E-value=2.3e+02 Score=26.37 Aligned_cols=64 Identities=9% Similarity=0.089 Sum_probs=44.7
Q ss_pred hhhhccCCCccchhhhch-HHHHHHHhCCceeEEEEechh--hHHHHHHHHh-cccccceeeeecCCC
Q 020663 30 IIICAICPSINSFRHFGC-CTKTMIYLNLVKQWLARHSAG--ALVAVNSYFE-APERVAALILIAPAI 93 (323)
Q Consensus 30 ~~~~~~~~~~~~~~~~~d-l~~ll~~l~~~~~~lvGhS~G--g~ia~~~a~~-~P~~v~~lil~~~~~ 93 (323)
..+|...++.++.++... +..+.+.++-..-+++|.|-| +.+++.++.+ ..+++.++.+-++..
T Consensus 200 ~~ic~~~~~~~~~~~~~~~i~~i~~~~~~~~~vvvalSGGVDSsvla~l~~~alG~~v~av~id~g~~ 267 (536)
T PLN02347 200 FDVCGVTADWKMQDVLEEQIELIKATVGPDEHVICALSGGVDSTVAATLVHKAIGDRLHCVFVDNGLL 267 (536)
T ss_pred HHHhCcCCCcCcchHHHHHHHHHHHHhccCCeEEEEecCChhHHHHHHHHHHHhCCcEEEEEEeCCCC
Confidence 356666678888887755 677777777555578899987 4555555555 567788887776653
No 314
>PLN02154 carbonic anhydrase
Probab=22.22 E-value=1.2e+02 Score=25.46 Aligned_cols=32 Identities=13% Similarity=-0.042 Sum_probs=25.6
Q ss_pred hchHHHHHHHhCCceeEEEEechhhHHHHHHH
Q 020663 45 FGCCTKTMIYLNLVKQWLARHSAGALVAVNSY 76 (323)
Q Consensus 45 ~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a 76 (323)
...|+-.+..|+++.++|+|||-=|.+...+.
T Consensus 153 ~aslEyAv~~L~v~~IvV~GHs~CGAV~Aal~ 184 (290)
T PLN02154 153 NSALEFAVTTLQVENIIVMGHSNCGGIAALMS 184 (290)
T ss_pred hhHHHHHHHHhCCCEEEEecCCCchHHHHHHh
Confidence 34577778889999999999998887776554
No 315
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=21.62 E-value=84 Score=28.06 Aligned_cols=38 Identities=16% Similarity=0.108 Sum_probs=23.2
Q ss_pred CCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCCCCCc
Q 020663 249 CPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVP 289 (323)
Q Consensus 249 ~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~ 289 (323)
..|+++.|+.|+......... .-+....++|||++|..
T Consensus 377 tnviFtNG~~DPW~~lgv~~~---~~~~~~~~~I~g~~Hc~ 414 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVTSD---SSDSVPAIVIPGGAHCS 414 (434)
T ss_dssp -SEEEEEETT-CCGGGS--S----SSSSEEEEEETT--TTG
T ss_pred CeEEeeCCCCCCcccccCCCC---CCCCcccEEECCCeeec
Confidence 479999999999976652222 12345667899999975
No 316
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=21.39 E-value=2.6e+02 Score=22.09 Aligned_cols=38 Identities=18% Similarity=0.218 Sum_probs=32.4
Q ss_pred CCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCCC
Q 020663 248 SCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNC 285 (323)
Q Consensus 248 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~ 285 (323)
..|++++.|..+...+++..+.+.+.+.+--++.++.+
T Consensus 53 ~yP~ly~~g~~~~~~s~~e~~~Lr~Yl~~GGfl~~D~~ 90 (207)
T PF13709_consen 53 FYPFLYWPGHGDFPLSDEEIANLRRYLENGGFLLFDDR 90 (207)
T ss_pred hCCEEEEeCCCCCCCCHHHHHHHHHHHHcCCEEEEECC
Confidence 67999999999998888888999998877777777664
No 317
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=21.35 E-value=72 Score=26.95 Aligned_cols=33 Identities=15% Similarity=-0.055 Sum_probs=22.7
Q ss_pred hchHHHHHHHhCCc---eeE-EEEechhhHHHHHHHH
Q 020663 45 FGCCTKTMIYLNLV---KQW-LARHSAGALVAVNSYF 77 (323)
Q Consensus 45 ~~dl~~ll~~l~~~---~~~-lvGhS~Gg~ia~~~a~ 77 (323)
+.-|.++.+.++.+ .+. +.|-|.||.+|+.++.
T Consensus 24 ~~vL~~Le~~~~~~i~~~fDli~GTStGgiiA~~la~ 60 (308)
T cd07211 24 LEILRKIEKLTGKPIHELFDYICGVSTGAILAFLLGL 60 (308)
T ss_pred HHHHHHHHHHhCCCchhhcCEEEecChhHHHHHHHhc
Confidence 44455555555532 233 7899999999999986
No 318
>PLN03014 carbonic anhydrase
Probab=21.30 E-value=1.2e+02 Score=26.12 Aligned_cols=31 Identities=13% Similarity=-0.040 Sum_probs=24.9
Q ss_pred hchHHHHHHHhCCceeEEEEechhhHHHHHH
Q 020663 45 FGCCTKTMIYLNLVKQWLARHSAGALVAVNS 75 (323)
Q Consensus 45 ~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~ 75 (323)
...|+-.+.+|+++.++|+|||-=|.+...+
T Consensus 207 ~asLEYAV~~L~V~~IVV~GHs~CGaV~Aa~ 237 (347)
T PLN03014 207 GAAIEYAVLHLKVENIVVIGHSACGGIKGLM 237 (347)
T ss_pred hhHHHHHHHHhCCCEEEEeCCCCchHHHHHH
Confidence 4567777888999999999999877766554
No 319
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=20.95 E-value=1.1e+02 Score=22.95 Aligned_cols=22 Identities=27% Similarity=0.072 Sum_probs=17.3
Q ss_pred CceeEEEEechhhHHHHHHHHh
Q 020663 57 LVKQWLARHSAGALVAVNSYFE 78 (323)
Q Consensus 57 ~~~~~lvGhS~Gg~ia~~~a~~ 78 (323)
..--.+.|-|.||.+|+.++..
T Consensus 26 ~~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 26 ERFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp CT-SEEEEECCHHHHHHHHHTC
T ss_pred CCccEEEEcChhhhhHHHHHhC
Confidence 3445689999999999888876
No 320
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=20.63 E-value=1.6e+02 Score=18.01 Aligned_cols=35 Identities=17% Similarity=0.337 Sum_probs=26.1
Q ss_pred hCCCcEEEEcCCCCCCccccChHHHHHHHHHHHHHh
Q 020663 273 AIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRA 308 (323)
Q Consensus 273 ~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 308 (323)
..|+..+ .+-++.+++-.|.++++.+.|.+|-++.
T Consensus 24 ~~PDTvI-tL~~G~k~vV~Es~~eVi~ki~~y~~~i 58 (60)
T PF06289_consen 24 ETPDTVI-TLTNGKKYVVKESVEEVIEKIIEYRRKI 58 (60)
T ss_pred EcCCeEE-EEeCCCEEEEECCHHHHHHHHHHHHHhc
Confidence 3577444 4445567888899999999999997754
No 321
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=20.52 E-value=31 Score=26.37 Aligned_cols=36 Identities=8% Similarity=0.002 Sum_probs=26.4
Q ss_pred hhhchHHHHHHHhCCceeEEEEechhhHHHHHHHHh
Q 020663 43 RHFGCCTKTMIYLNLVKQWLARHSAGALVAVNSYFE 78 (323)
Q Consensus 43 ~~~~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~ 78 (323)
+|.+.+.++++-..-.-...+|-|||+..|+.++.-
T Consensus 82 ~Yw~El~~i~dwa~~~v~stl~iCWgaqaal~~~yG 117 (175)
T cd03131 82 DYWEELTEILDWAKTHVTSTLFSCWAAMAALYYFYG 117 (175)
T ss_pred chHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHcC
Confidence 455567777766653445689999999999998864
No 322
>cd01015 CSHase N-carbamoylsarcosine amidohydrolase (CSHase) hydrolyzes N-carbamoylsarcosine to sarcosine, carbon dioxide and ammonia. CSHase is involved in one of the two alternative pathways for creatinine degradation to glycine in microorganisms.This CSHase-containing pathway degrades creatinine via N-methylhydantoin N-carbamoylsarcosine and sarcosine to glycine. Enzymes of this pathway are used in the diagnosis for renal disfunction, for determining creatinine levels in urine and serum.
Probab=20.40 E-value=2.4e+02 Score=21.38 Aligned_cols=48 Identities=6% Similarity=-0.047 Sum_probs=34.5
Q ss_pred chHHHHHHHhCCceeEEEEechhhHHHHHHHHhcccccceeeeecCCC
Q 020663 46 GCCTKTMIYLNLVKQWLARHSAGALVAVNSYFEAPERVAALILIAPAI 93 (323)
Q Consensus 46 ~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~P~~v~~lil~~~~~ 93 (323)
.++..+++..|+++++|+|-+.-..+-.-....+-.-.+-.+..+...
T Consensus 103 t~L~~~L~~~gi~~vvi~G~~t~~CV~~Ta~~A~~~Gy~v~vv~Da~a 150 (179)
T cd01015 103 TSLAATLTARGVDTLIVAGCSTSGCIRATAVDAMQHGFRPIVVRECVG 150 (179)
T ss_pred CcHHHHHHHcCCCEEEEeeecccHhHHHHHHHHHHCCCeEEEeecccc
Confidence 589999999999999999999877664443333333456666666653
No 323
>PF07643 DUF1598: Protein of unknown function (DUF1598); InterPro: IPR011487 This is a family of Rhodopirellula baltica hypothetical proteins of about 500 amino acids in length.
Probab=20.38 E-value=2.2e+02 Score=18.75 Aligned_cols=32 Identities=9% Similarity=-0.240 Sum_probs=26.7
Q ss_pred hHHHHHHHhCCceeEEEEechhhHHHHHHHHh
Q 020663 47 CCTKTMIYLNLVKQWLARHSAGALVAVNSYFE 78 (323)
Q Consensus 47 dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~ 78 (323)
-+..+.+.||.+.+.+.|.+-...+|..+...
T Consensus 32 ~~~~l~~~LG~QdV~V~Gip~~sh~ArvLVeA 63 (84)
T PF07643_consen 32 WVDGLRQALGPQDVTVYGIPADSHFARVLVEA 63 (84)
T ss_pred HHHHHHHHhCCceeEEEccCCccHHHHHHHHh
Confidence 45566678999999999999999999887654
No 324
>cd00281 DAP_dppA Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacterized
Probab=20.17 E-value=3.2e+02 Score=22.64 Aligned_cols=59 Identities=14% Similarity=0.156 Sum_probs=39.4
Q ss_pred hccCCCCEEEEecCCCCCCCchHHHHHHhhCCCcEEEEcCC-CCCC-ccccChHHHHHHHHHHHHHh
Q 020663 244 LHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKN-CGHV-PQEEKVEEFVSIVARFLQRA 308 (323)
Q Consensus 244 l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~-~gH~-~~~e~p~~~~~~i~~fl~~~ 308 (323)
.....+||.++.|++- ..++..+.+|+++.+.++. .|++ ...-.|++..+.|.+=.++.
T Consensus 142 Ag~~gVPV~lvsGDd~------~~~ea~~~~P~~~tv~vK~~~gr~aa~~~~p~~a~~~I~~~a~~A 202 (265)
T cd00281 142 AGYYGVPVVMVAGDAE------VCKEAKAYDAQVETVVTKKGMGRFSVKAPSPQKVLRAIREGTEGS 202 (265)
T ss_pred HhhcCCCEEEEecCHH------HHHHHHHhCCCceEEEEeeeeCCCccccCCHHHHHHHHHHHHHHH
Confidence 3567899999998543 3345566779988888864 4543 34445777777777666443
Done!