Query 020671
Match_columns 323
No_of_seqs 329 out of 1497
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 06:29:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020671.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020671hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2csy_A Zinc finger protein 183 99.5 7E-15 2.4E-19 112.7 4.7 68 255-322 11-78 (81)
2 3ztg_A E3 ubiquitin-protein li 99.2 9E-12 3.1E-16 97.2 5.1 47 257-303 11-60 (92)
3 2d8t_A Dactylidin, ring finger 99.2 1.4E-11 4.9E-16 92.0 5.6 48 257-304 13-60 (71)
4 2ysl_A Tripartite motif-contai 99.2 3.2E-11 1.1E-15 89.8 7.1 48 257-304 18-68 (73)
5 1t1h_A Gspef-atpub14, armadill 99.2 2.9E-11 1E-15 91.5 6.6 47 258-304 7-54 (78)
6 4ayc_A E3 ubiquitin-protein li 99.2 1.1E-11 3.6E-16 104.4 4.3 46 260-305 54-99 (138)
7 2yur_A Retinoblastoma-binding 99.2 1.5E-11 5.2E-16 92.9 4.2 48 257-304 13-63 (74)
8 2ecy_A TNF receptor-associated 99.2 2.4E-11 8.3E-16 89.4 4.9 48 257-304 13-61 (66)
9 2djb_A Polycomb group ring fin 99.2 2.5E-11 8.5E-16 90.9 5.0 48 257-304 13-61 (72)
10 2ysj_A Tripartite motif-contai 99.2 5E-11 1.7E-15 86.8 6.4 43 257-299 18-63 (63)
11 2ecw_A Tripartite motif-contai 99.2 4E-11 1.4E-15 91.0 6.1 48 257-304 17-70 (85)
12 3fl2_A E3 ubiquitin-protein li 99.1 2.8E-11 9.7E-16 99.7 4.6 47 259-305 52-99 (124)
13 3lrq_A E3 ubiquitin-protein li 99.1 3.4E-11 1.2E-15 96.1 5.0 46 259-304 22-69 (100)
14 2kre_A Ubiquitin conjugation f 99.1 1.1E-10 3.7E-15 94.1 7.5 47 258-304 28-74 (100)
15 2kr4_A Ubiquitin conjugation f 99.1 6.4E-11 2.2E-15 92.4 5.6 48 257-304 12-59 (85)
16 2egp_A Tripartite motif-contai 99.1 3.1E-11 1.1E-15 91.0 3.7 47 258-304 11-64 (79)
17 2ecv_A Tripartite motif-contai 99.1 6E-11 2.1E-15 90.0 5.0 48 257-304 17-70 (85)
18 2ecj_A Tripartite motif-contai 99.1 9.9E-11 3.4E-15 83.3 5.5 42 258-299 14-58 (58)
19 2y43_A E3 ubiquitin-protein li 99.1 4.9E-11 1.7E-15 94.4 4.1 46 259-304 22-68 (99)
20 1wgm_A Ubiquitin conjugation f 99.1 3.3E-10 1.1E-14 91.0 8.9 47 258-304 21-68 (98)
21 2ea6_A Ring finger protein 4; 99.1 4.3E-11 1.5E-15 87.8 3.3 48 257-304 13-67 (69)
22 2kiz_A E3 ubiquitin-protein li 99.1 8.6E-11 2.9E-15 86.9 4.9 51 257-307 12-65 (69)
23 2ckl_A Polycomb group ring fin 99.1 7.8E-11 2.7E-15 94.8 5.0 47 259-305 15-62 (108)
24 3l11_A E3 ubiquitin-protein li 99.1 5E-11 1.7E-15 96.8 3.4 46 259-304 15-61 (115)
25 2ct2_A Tripartite motif protei 99.1 1.2E-10 4E-15 89.5 4.9 47 258-304 14-67 (88)
26 1z6u_A NP95-like ring finger p 99.0 1.2E-10 4E-15 100.1 5.0 47 259-305 78-125 (150)
27 2ect_A Ring finger protein 126 99.0 1.5E-10 5.2E-15 87.5 4.9 48 257-304 13-63 (78)
28 1jm7_A BRCA1, breast cancer ty 99.0 1.8E-10 6.2E-15 92.3 5.1 44 260-303 22-68 (112)
29 2ecm_A Ring finger and CHY zin 99.0 1.1E-10 3.7E-15 82.4 3.2 46 260-305 6-55 (55)
30 3ng2_A RNF4, snurf, ring finge 99.0 5.5E-11 1.9E-15 88.0 1.7 46 259-304 10-62 (71)
31 1chc_A Equine herpes virus-1 r 99.0 1.2E-10 4.1E-15 85.7 2.9 47 260-306 6-53 (68)
32 2ecn_A Ring finger protein 141 99.0 2E-10 6.7E-15 85.1 3.2 46 258-304 14-59 (70)
33 2xeu_A Ring finger protein 4; 99.0 1.1E-10 3.6E-15 84.4 1.5 46 259-304 3-55 (64)
34 2ckl_B Ubiquitin ligase protei 99.0 2.5E-10 8.7E-15 98.3 4.1 47 258-304 53-101 (165)
35 1rmd_A RAG1; V(D)J recombinati 99.0 2.5E-10 8.4E-15 92.8 3.6 46 259-304 23-69 (116)
36 1bor_A Transcription factor PM 99.0 1.3E-10 4.4E-15 83.6 1.7 44 258-304 5-48 (56)
37 2l0b_A E3 ubiquitin-protein li 99.0 3.7E-10 1.3E-14 88.6 4.5 47 258-304 39-88 (91)
38 2ep4_A Ring finger protein 24; 99.0 3E-10 1E-14 85.0 3.7 50 258-307 14-66 (74)
39 1iym_A EL5; ring-H2 finger, ub 98.9 5.6E-10 1.9E-14 78.8 4.5 44 260-303 6-53 (55)
40 1jm7_B BARD1, BRCA1-associated 98.9 2.5E-10 8.6E-15 93.3 2.3 44 259-304 22-66 (117)
41 1x4j_A Ring finger protein 38; 98.9 3.2E-10 1.1E-14 85.4 2.3 47 258-304 22-71 (75)
42 1g25_A CDK-activating kinase a 98.9 5.7E-10 2E-14 81.7 3.3 45 260-304 4-54 (65)
43 2yu4_A E3 SUMO-protein ligase 98.9 6.5E-10 2.2E-14 88.1 3.3 45 258-302 6-59 (94)
44 3hct_A TNF receptor-associated 98.9 4.6E-10 1.6E-14 91.8 2.3 48 258-305 17-65 (118)
45 1v87_A Deltex protein 2; ring- 98.9 1E-09 3.4E-14 88.7 3.8 45 260-304 26-93 (114)
46 2c2l_A CHIP, carboxy terminus 98.9 8.9E-10 3E-14 100.3 3.7 49 256-304 205-254 (281)
47 4ap4_A E3 ubiquitin ligase RNF 98.9 7.4E-10 2.5E-14 90.3 2.5 46 259-304 7-59 (133)
48 4ic3_A E3 ubiquitin-protein li 98.8 1.2E-09 4.1E-14 82.8 2.6 45 259-307 24-69 (74)
49 3knv_A TNF receptor-associated 98.8 6.2E-10 2.1E-14 94.7 0.6 47 257-303 29-76 (141)
50 2vje_B MDM4 protein; proto-onc 98.8 1.7E-09 5.7E-14 79.8 2.0 49 259-307 7-58 (63)
51 2ecg_A Baculoviral IAP repeat- 98.7 3.7E-09 1.3E-13 80.0 3.2 44 259-306 25-69 (75)
52 2vje_A E3 ubiquitin-protein li 98.7 3E-09 1E-13 78.7 2.4 48 260-307 9-59 (64)
53 3htk_C E3 SUMO-protein ligase 98.7 9.5E-09 3.3E-13 96.3 6.3 47 256-302 178-229 (267)
54 2ea5_A Cell growth regulator w 98.7 9.9E-09 3.4E-13 77.0 5.2 46 258-307 14-60 (68)
55 1e4u_A Transcriptional repress 98.7 9.9E-09 3.4E-13 79.2 4.9 47 258-304 10-61 (78)
56 2ecl_A Ring-box protein 2; RNF 98.7 1.4E-08 4.7E-13 78.2 5.0 44 261-304 17-75 (81)
57 2f42_A STIP1 homology and U-bo 98.7 7.4E-09 2.5E-13 92.0 3.9 48 257-304 104-152 (179)
58 3hcs_A TNF receptor-associated 98.7 6.7E-09 2.3E-13 89.6 2.4 49 257-305 16-65 (170)
59 2y1n_A E3 ubiquitin-protein li 98.6 1.3E-08 4.3E-13 100.2 4.1 46 260-305 333-379 (389)
60 4ap4_A E3 ubiquitin ligase RNF 98.6 1.2E-08 4.2E-13 83.0 1.3 46 259-304 72-124 (133)
61 2yho_A E3 ubiquitin-protein li 98.6 2.2E-08 7.4E-13 77.2 2.5 42 261-306 20-62 (79)
62 3dpl_R Ring-box protein 1; ubi 98.5 6.9E-08 2.4E-12 78.7 4.8 44 260-303 38-99 (106)
63 2bay_A PRE-mRNA splicing facto 98.3 1.2E-07 4.2E-12 69.8 1.7 46 258-303 2-48 (61)
64 3t6p_A Baculoviral IAP repeat- 98.3 9.1E-08 3.1E-12 92.6 1.3 45 259-307 295-340 (345)
65 1wim_A KIAA0161 protein; ring 98.2 3.8E-07 1.3E-11 71.5 2.7 44 259-302 5-61 (94)
66 4a0k_B E3 ubiquitin-protein li 98.2 2.9E-07 1E-11 76.5 0.5 44 260-303 49-110 (117)
67 2d8s_A Cellular modulator of i 98.1 2.5E-06 8.5E-11 66.1 4.7 45 260-304 16-69 (80)
68 3vk6_A E3 ubiquitin-protein li 97.6 2.9E-05 9.9E-10 62.9 3.3 46 261-306 3-50 (101)
69 2ct0_A Non-SMC element 1 homol 97.5 0.00015 5E-09 55.5 5.7 44 261-304 17-63 (74)
70 1vyx_A ORF K3, K3RING; zinc-bi 97.2 0.0002 6.9E-09 52.3 3.1 45 260-304 7-58 (60)
71 1m9o_A Tristetraproline; Cys3H 97.1 0.00027 9.1E-09 53.3 2.7 32 184-215 9-40 (77)
72 2d9m_A Zinc finger CCCH-type d 96.6 0.00058 2E-08 51.8 1.3 24 188-212 21-44 (69)
73 3k1l_B Fancl; UBC, ring, RWD, 96.4 0.00062 2.1E-08 66.3 0.8 51 257-307 306-375 (381)
74 1m9o_A Tristetraproline; Cys3H 96.3 0.00062 2.1E-08 51.3 0.0 29 184-212 47-75 (77)
75 2cqe_A KIAA1064 protein; CCCH 96.0 0.0023 7.9E-08 51.2 1.8 26 187-212 36-61 (98)
76 2cqe_A KIAA1064 protein; CCCH 95.9 0.0023 7.9E-08 51.2 1.6 26 184-210 10-35 (98)
77 2d9n_A Cleavage and polyadenyl 95.7 0.0029 1E-07 48.2 1.1 28 185-213 8-35 (77)
78 2rhk_C Cleavage and polyadenyl 95.6 0.0032 1.1E-07 47.7 0.9 27 185-212 14-40 (72)
79 2jun_A Midline-1; B-BOX, TRIM, 95.1 0.0092 3.2E-07 46.6 2.4 31 260-290 4-38 (101)
80 3d2q_A Muscleblind-like protei 94.8 0.0072 2.5E-07 45.3 0.9 24 188-212 7-31 (70)
81 2ko5_A Ring finger protein Z; 93.9 0.036 1.2E-06 44.4 3.0 44 258-302 27-70 (99)
82 2fc6_A Nuclear, target of EGR1 93.5 0.02 6.7E-07 40.7 0.9 27 187-213 20-46 (50)
83 2rpp_A Muscleblind-like protei 93.4 0.043 1.5E-06 43.3 2.8 39 166-213 4-43 (89)
84 3nw0_A Non-structural maintena 93.1 0.085 2.9E-06 48.2 4.7 43 260-302 181-226 (238)
85 3d2n_A Muscleblind-like protei 92.6 0.046 1.6E-06 42.5 1.9 26 187-213 9-35 (83)
86 2d9n_A Cleavage and polyadenyl 91.5 0.051 1.7E-06 41.2 0.9 23 189-212 40-62 (77)
87 2e5s_A Otthump00000018578; ZF- 90.9 0.033 1.1E-06 44.5 -0.6 25 188-213 21-46 (98)
88 3d2q_A Muscleblind-like protei 89.6 0.092 3.1E-06 39.1 0.9 24 187-212 42-65 (70)
89 2rhk_C Cleavage and polyadenyl 87.6 0.13 4.4E-06 38.7 0.4 23 189-212 46-68 (72)
90 2cs3_A Protein C14ORF4, MY039 87.3 0.63 2.2E-05 36.4 4.2 51 256-306 12-77 (93)
91 2e5s_A Otthump00000018578; ZF- 86.9 0.17 5.9E-06 40.3 0.9 23 188-212 57-79 (98)
92 3u9g_A Zinc finger CCCH-type a 85.6 0.22 7.5E-06 45.6 0.9 25 187-211 151-178 (229)
93 3u1l_A PRE-mRNA-splicing facto 84.3 0.24 8.2E-06 45.3 0.6 26 186-212 69-94 (240)
94 2lbm_A Transcriptional regulat 84.2 1.6 5.5E-05 37.0 5.7 61 260-320 64-136 (142)
95 3i2d_A E3 SUMO-protein ligase 78.0 1.2 4.1E-05 43.4 3.1 48 256-303 246-298 (371)
96 3m62_A Ubiquitin conjugation f 77.8 2.6 8.7E-05 45.8 5.8 48 256-303 888-936 (968)
97 3d2n_A Muscleblind-like protei 74.6 0.88 3E-05 35.1 0.9 23 188-212 44-66 (83)
98 1m3v_A FLIN4, fusion of the LI 73.2 2.2 7.7E-05 34.1 3.1 46 260-305 33-81 (122)
99 4fo9_A E3 SUMO-protein ligase 72.1 2.1 7.1E-05 41.6 3.0 49 256-304 212-265 (360)
100 1z60_A TFIIH basal transcripti 70.9 3 0.0001 30.3 2.9 39 261-299 17-58 (59)
101 2xjy_A Rhombotin-2; oncoprotei 65.1 3.6 0.00012 32.9 2.6 47 259-305 29-78 (131)
102 2xqn_T Testin, TESS; metal-bin 63.3 5.9 0.0002 31.4 3.6 44 259-304 30-74 (126)
103 1iml_A CRIP, cysteine rich int 60.5 7.3 0.00025 28.1 3.4 47 259-307 27-75 (76)
104 2jtn_A LIM domain-binding prot 59.9 7.3 0.00025 33.1 3.8 44 259-304 87-130 (182)
105 2d8v_A Zinc finger FYVE domain 59.5 5.2 0.00018 29.9 2.3 35 255-291 5-40 (67)
106 2rgt_A Fusion of LIM/homeobox 59.0 7.9 0.00027 32.5 3.8 44 259-304 33-76 (169)
107 2pv0_B DNA (cytosine-5)-methyl 58.9 9 0.00031 37.5 4.6 45 258-302 92-148 (386)
108 2rpp_A Muscleblind-like protei 58.4 2.8 9.5E-05 32.8 0.8 23 188-212 52-74 (89)
109 1bbo_A Human enhancer-binding 57.9 6 0.0002 25.8 2.3 47 259-312 1-48 (57)
110 4gzn_C ZFP-57, zinc finger pro 57.2 3.3 0.00011 29.2 1.0 49 257-312 2-51 (60)
111 1rut_X Flinc4, fusion protein 56.7 2.9 9.8E-05 36.0 0.6 47 259-305 32-81 (188)
112 3uk3_C Zinc finger protein 217 55.9 8.6 0.00029 25.0 2.9 49 258-313 3-52 (57)
113 2fiy_A Protein FDHE homolog; F 55.1 1.8 6.2E-05 41.0 -1.0 46 257-302 180-231 (309)
114 2lv9_A Histone-lysine N-methyl 54.0 13 0.00045 29.0 4.1 44 259-303 28-77 (98)
115 1x5w_A Zinc finger protein 64, 52.5 12 0.0004 25.7 3.2 51 256-313 6-57 (70)
116 3a1b_A DNA (cytosine-5)-methyl 52.3 11 0.00039 32.4 3.7 42 258-302 78-134 (159)
117 2lce_A B-cell lymphoma 6 prote 51.0 14 0.00048 25.6 3.5 51 256-313 14-65 (74)
118 2cup_A Skeletal muscle LIM-pro 50.2 8.1 0.00028 29.3 2.2 44 259-304 33-77 (101)
119 1x6e_A Zinc finger protein 24; 50.1 7.6 0.00026 26.9 1.9 51 256-313 11-62 (72)
120 2adr_A ADR1; transcription reg 47.9 10 0.00034 25.0 2.2 47 259-312 2-49 (60)
121 1wd2_A Ariadne-1 protein homol 47.8 2.6 8.8E-05 30.5 -1.0 31 261-291 8-46 (60)
122 3mpx_A FYVE, rhogef and PH dom 46.9 4.1 0.00014 39.0 0.0 41 260-300 376-427 (434)
123 2ee8_A Protein ODD-skipped-rel 46.8 29 0.00099 25.4 4.9 59 255-313 13-93 (106)
124 2dmi_A Teashirt homolog 3; zin 46.4 4.3 0.00015 30.7 0.1 57 257-313 17-100 (115)
125 3ql9_A Transcriptional regulat 46.0 29 0.001 28.8 5.1 41 261-301 59-110 (129)
126 1wew_A DNA-binding family prot 45.4 26 0.00089 26.0 4.4 45 256-301 13-71 (78)
127 1y02_A CARP2, FYVE-ring finger 44.1 2 6.8E-05 35.4 -2.3 42 260-301 20-65 (120)
128 3mjh_B Early endosome antigen 43.5 4.9 0.00017 26.1 -0.0 15 259-273 5-19 (34)
129 2lri_C Autoimmune regulator; Z 42.6 34 0.0012 24.8 4.5 40 261-302 14-59 (66)
130 2dmd_A Zinc finger protein 64, 42.0 28 0.00094 25.0 4.0 16 257-272 6-21 (96)
131 2ebt_A Krueppel-like factor 5; 41.0 51 0.0017 23.6 5.4 59 255-313 11-95 (100)
132 2kmk_A Zinc finger protein GFI 40.8 11 0.00039 26.1 1.6 21 292-312 56-76 (82)
133 2cot_A Zinc finger protein 435 40.7 18 0.00062 25.2 2.7 46 256-312 15-65 (77)
134 1b8t_A Protein (CRP1); LIM dom 40.0 27 0.00093 29.7 4.2 44 259-304 142-186 (192)
135 2yt9_A Zinc finger-containing 39.4 27 0.00092 25.0 3.6 21 293-313 65-85 (95)
136 2epr_A POZ-, at HOOK-, and zin 38.2 30 0.001 21.8 3.3 18 255-272 8-25 (48)
137 1weo_A Cellulose synthase, cat 38.1 23 0.0008 27.9 3.1 44 260-303 17-68 (93)
138 2epq_A POZ-, at HOOK-, and zin 37.9 20 0.00068 22.2 2.3 17 256-272 7-23 (45)
139 1joc_A EEA1, early endosomal a 37.5 12 0.0004 30.6 1.4 29 261-289 71-103 (125)
140 3v33_A Ribonuclease ZC3H12A; r 36.8 6.8 0.00023 35.6 -0.2 44 163-210 168-212 (223)
141 3t7l_A Zinc finger FYVE domain 36.5 13 0.00044 28.6 1.4 31 260-290 21-55 (90)
142 1z2q_A LM5-1; membrane protein 35.7 17 0.00059 27.4 2.0 30 260-289 22-55 (84)
143 2jmo_A Parkin; IBR, E3 ligase, 34.9 5.7 0.00019 29.9 -0.9 20 276-297 55-74 (80)
144 1llm_C Chimera of ZIF23-GCN4; 34.6 18 0.0006 26.0 1.8 49 258-312 2-50 (88)
145 1f62_A Transcription factor WS 34.5 28 0.00096 23.4 2.8 43 261-303 2-51 (51)
146 2csh_A Zinc finger protein 297 34.4 24 0.0008 26.2 2.6 46 258-314 36-86 (110)
147 2yw8_A RUN and FYVE domain-con 33.9 18 0.00061 27.2 1.8 29 261-289 21-53 (82)
148 1x61_A Thyroid receptor intera 33.9 36 0.0012 23.8 3.4 33 259-291 33-66 (72)
149 3u5n_A E3 ubiquitin-protein li 33.5 12 0.00041 32.7 0.9 41 261-303 9-55 (207)
150 1x4u_A Zinc finger, FYVE domai 32.9 18 0.00063 27.2 1.7 30 260-289 15-48 (84)
151 2gqj_A Zinc finger protein KIA 32.3 26 0.0009 25.9 2.5 52 257-313 22-74 (98)
152 2ct1_A Transcriptional repress 32.1 26 0.0009 24.3 2.4 51 257-313 13-65 (77)
153 3lqh_A Histone-lysine N-methyl 30.8 24 0.00082 30.8 2.3 47 261-307 4-68 (183)
154 1wen_A Inhibitor of growth fam 30.4 51 0.0017 24.2 3.8 46 256-303 13-66 (71)
155 3zyq_A Hepatocyte growth facto 30.3 15 0.00052 32.7 1.0 29 261-289 166-198 (226)
156 2k16_A Transcription initiatio 30.1 39 0.0013 24.5 3.1 43 258-300 17-66 (75)
157 2dlq_A GLI-kruppel family memb 30.0 61 0.0021 24.0 4.4 15 258-272 6-20 (124)
158 1vfy_A Phosphatidylinositol-3- 29.9 20 0.00067 26.4 1.4 28 261-288 13-44 (73)
159 1weu_A Inhibitor of growth fam 29.8 46 0.0016 25.8 3.6 47 255-303 32-86 (91)
160 2l5u_A Chromodomain-helicase-D 29.6 35 0.0012 24.1 2.7 42 258-301 10-57 (61)
161 1dvp_A HRS, hepatocyte growth 28.8 16 0.00054 32.2 0.8 30 260-289 162-195 (220)
162 1wfk_A Zinc finger, FYVE domai 28.6 22 0.00074 27.3 1.5 29 261-289 11-43 (88)
163 2gmg_A Hypothetical protein PF 28.3 19 0.00065 29.0 1.1 25 274-303 70-94 (105)
164 2eop_A Zinc finger protein 268 28.3 51 0.0017 20.1 3.1 16 257-272 10-25 (46)
165 2l4z_A DNA endonuclease RBBP8, 28.3 32 0.0011 27.5 2.5 32 259-290 88-122 (123)
166 1mm2_A MI2-beta; PHD, zinc fin 28.0 24 0.00081 25.1 1.5 41 260-302 10-56 (61)
167 2ytt_A Zinc finger protein 473 27.8 52 0.0018 20.2 3.1 17 256-272 9-25 (46)
168 3vth_A Hydrogenase maturation 27.5 19 0.00064 38.1 1.2 42 261-302 113-192 (761)
169 2em0_A Zinc finger protein 224 27.2 73 0.0025 19.4 3.7 16 257-272 10-25 (46)
170 2d9h_A Zinc finger protein 692 27.1 36 0.0012 23.5 2.4 50 257-313 5-58 (78)
171 2cor_A Pinch protein; LIM doma 27.1 36 0.0012 24.7 2.5 31 260-290 42-72 (79)
172 1wfp_A Zinc finger (AN1-like) 26.9 1.2E+02 0.0039 23.0 5.2 40 256-298 22-62 (74)
173 1x64_A Alpha-actinin-2 associa 26.8 34 0.0012 25.3 2.3 33 259-291 51-84 (89)
174 1wff_A Riken cDNA 2810002D23 p 26.8 34 0.0012 26.6 2.3 39 257-298 23-63 (85)
175 2ytr_A Zinc finger protein 347 26.8 56 0.0019 19.9 3.1 16 257-272 10-25 (46)
176 2ytq_A Zinc finger protein 268 26.4 58 0.002 20.0 3.1 16 257-272 10-25 (46)
177 2ytn_A Zinc finger protein 347 26.4 76 0.0026 19.3 3.7 16 257-272 10-25 (46)
178 1wfl_A Zinc finger protein 216 26.2 97 0.0033 23.4 4.7 37 258-297 24-61 (74)
179 2epz_A Zinc finger protein 28 26.2 58 0.002 19.9 3.1 16 257-272 10-25 (46)
180 1nyp_A Pinch protein; LIM doma 26.1 36 0.0012 23.5 2.2 33 259-291 31-64 (66)
181 2lv2_A Insulinoma-associated p 26.0 27 0.00092 26.1 1.6 46 257-313 26-76 (85)
182 2drp_A Protein (tramtrack DNA- 26.0 29 0.00099 23.1 1.6 50 257-313 8-60 (66)
183 1wjp_A Zinc finger protein 295 26.0 65 0.0022 23.7 3.8 17 256-272 13-29 (107)
184 2elz_A Zinc finger protein 224 25.8 82 0.0028 19.2 3.8 16 257-272 10-25 (46)
185 2d8x_A Protein pinch; LIM doma 25.7 35 0.0012 23.9 2.1 33 259-291 31-64 (70)
186 2d8z_A Four and A half LIM dom 25.4 52 0.0018 22.9 3.0 33 259-291 31-64 (70)
187 2ytg_A ZFP-95, zinc finger pro 25.1 49 0.0017 20.3 2.6 17 257-273 10-26 (46)
188 1j2o_A FLIN2, fusion of rhombo 25.1 51 0.0017 25.6 3.1 39 259-299 30-71 (114)
189 1ard_A Yeast transcription fac 24.7 29 0.00099 18.6 1.2 10 260-269 3-12 (29)
190 1wyh_A SLIM 2, skeletal muscle 24.6 47 0.0016 23.2 2.6 32 260-291 34-66 (72)
191 1znf_A 31ST zinc finger from X 24.2 25 0.00087 18.6 0.9 11 260-270 2-12 (27)
192 1x6h_A Transcriptional repress 24.2 40 0.0014 23.4 2.2 16 257-272 13-28 (86)
193 2ctu_A Zinc finger protein 483 24.0 43 0.0015 22.4 2.2 33 257-289 16-49 (73)
194 2el4_A Zinc finger protein 268 23.9 61 0.0021 19.7 2.8 16 257-272 10-25 (46)
195 2dar_A PDZ and LIM domain prot 23.9 56 0.0019 24.1 3.1 33 259-291 51-84 (90)
196 2ctd_A Zinc finger protein 512 23.8 63 0.0021 24.1 3.4 48 258-312 33-81 (96)
197 2d8y_A Eplin protein; LIM doma 23.8 70 0.0024 23.6 3.6 37 259-297 42-79 (91)
198 2wbt_A B-129; zinc finger; 2.7 23.7 60 0.0021 24.7 3.3 48 258-313 73-120 (129)
199 2lt7_A Transcriptional regulat 23.1 25 0.00086 28.2 1.0 57 257-313 20-98 (133)
200 1wig_A KIAA1808 protein; LIM d 23.1 44 0.0015 23.8 2.2 33 259-291 31-65 (73)
201 2eml_A Zinc finger protein 28 23.0 50 0.0017 20.2 2.3 16 257-272 10-25 (46)
202 1a7i_A QCRP2 (LIM1); LIM domai 23.0 23 0.0008 25.6 0.7 42 259-302 34-76 (81)
203 1klr_A Zinc finger Y-chromosom 22.8 36 0.0012 18.2 1.4 10 260-269 3-12 (30)
204 4g9i_A Hydrogenase maturation 22.7 25 0.00084 37.2 1.0 22 281-302 158-187 (772)
205 1p7a_A BF3, BKLF, kruppel-like 22.7 32 0.0011 20.0 1.2 16 257-272 9-24 (37)
206 2jne_A Hypothetical protein YF 22.0 11 0.00037 30.2 -1.4 40 259-303 32-71 (101)
207 1paa_A Yeast transcription fac 22.0 36 0.0012 18.4 1.3 13 259-271 2-14 (30)
208 2lvu_A Zinc finger and BTB dom 27.6 19 0.00065 19.2 0.0 14 259-272 2-15 (26)
209 2eoe_A Zinc finger protein 347 21.9 53 0.0018 20.0 2.2 16 257-272 10-25 (46)
210 2jp9_A Wilms tumor 1; DNA bind 21.8 80 0.0027 23.2 3.6 19 294-312 67-85 (119)
211 2em9_A Zinc finger protein 224 21.8 60 0.002 19.8 2.4 16 257-272 10-25 (46)
212 1g47_A Pinch protein; LIM doma 21.8 44 0.0015 23.6 2.0 31 260-290 40-71 (77)
213 2jrp_A Putative cytoplasmic pr 21.8 10 0.00036 29.2 -1.5 39 260-303 3-41 (81)
214 2zet_C Melanophilin; complex, 21.7 30 0.001 29.3 1.2 43 259-301 68-116 (153)
215 2em7_A Zinc finger protein 224 21.6 61 0.0021 19.8 2.4 16 257-272 10-25 (46)
216 1x4l_A Skeletal muscle LIM-pro 21.5 47 0.0016 23.3 2.1 33 259-291 35-68 (72)
217 1wfh_A Zinc finger (AN1-like) 21.4 1E+02 0.0035 22.6 3.9 39 256-297 12-51 (64)
218 2eme_A Zinc finger protein 473 21.4 54 0.0019 20.0 2.2 16 257-272 10-25 (46)
219 2eq0_A Zinc finger protein 347 21.3 56 0.0019 20.0 2.2 16 257-272 10-25 (46)
220 2cur_A Skeletal muscle LIM-pro 21.3 68 0.0023 22.2 2.9 33 259-291 31-64 (69)
221 2emf_A Zinc finger protein 484 21.2 80 0.0027 19.3 3.0 16 257-272 10-25 (46)
222 1a1h_A QGSR zinc finger peptid 21.1 43 0.0015 23.5 1.8 49 258-312 33-81 (90)
223 2ep0_A Zinc finger protein 28 20.9 58 0.002 19.9 2.2 17 256-272 9-25 (46)
224 2ema_A Zinc finger protein 347 20.9 72 0.0024 19.5 2.7 16 257-272 10-25 (46)
225 2yql_A PHD finger protein 21A; 20.7 14 0.0005 25.6 -0.9 38 261-300 11-54 (56)
No 1
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=7e-15 Score=112.73 Aligned_cols=68 Identities=51% Similarity=1.214 Sum_probs=61.0
Q ss_pred CCCCCccccccccCCCCcEEccCCCcccHHHHHHhccCCCCCCCCCCCCCCchhhHHHHHHHHHHhcC
Q 020671 255 EDSLPFACFICRKPFVDPVVTKCKHYFCEHCALKHHSKNKKCFVCNEPTLGIFNTALEIRKRMAEEGK 322 (323)
Q Consensus 255 ee~~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~gvfn~Ak~L~~kLk~~kq 322 (323)
+....+.|+||++.+.+|++++|||+||..|+..|+.....||+|+.++..+++....|+.+|++.++
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~l~~~~~~~~~ 78 (81)
T 2csy_A 11 EEEIPFRCFICRQAFQNPVVTKCRHYFCESCALEHFRATPRCYICDQPTGGIFNPAKELMAKLQKSGP 78 (81)
T ss_dssp CCCCCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHHHHCSBCSSSCCBCCSCCEECHHHHHHHSSSCS
T ss_pred cCCCCCCCcCCCchhcCeeEccCCCHhHHHHHHHHHHCCCcCCCcCccccccCCcHHHHHHHHHhhCc
Confidence 44556799999999999999999999999999999988899999999999999999999888876543
No 2
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=99.21 E-value=9e-12 Score=97.15 Aligned_cols=47 Identities=23% Similarity=0.674 Sum_probs=42.0
Q ss_pred CCCccccccccCCCCcEEcc-CCCcccHHHHHHhcc--CCCCCCCCCCCC
Q 020671 257 SLPFACFICRKPFVDPVVTK-CKHYFCEHCALKHHS--KNKKCFVCNEPT 303 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~PVvt~-CGH~FC~~Ci~~~~~--~s~~CP~Cr~~t 303 (323)
...+.|+||++.+.+|++++ |||.||..||..|+. ....||+|+.+.
T Consensus 11 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 11 PDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp CTTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred CcCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcC
Confidence 34578999999999999999 999999999999986 447999999985
No 3
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=1.4e-11 Score=92.02 Aligned_cols=48 Identities=31% Similarity=0.619 Sum_probs=43.7
Q ss_pred CCCccccccccCCCCcEEccCCCcccHHHHHHhccCCCCCCCCCCCCC
Q 020671 257 SLPFACFICRKPFVDPVVTKCKHYFCEHCALKHHSKNKKCFVCNEPTL 304 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~ 304 (323)
...+.|+||++.+.+|++++|||.||..||..|+.....||+||....
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (71)
T 2d8t_A 13 LTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWLGKRCALCRQEIP 60 (71)
T ss_dssp SSCCBCSSSSSBCSSEEEETTTEEEEHHHHHHCTTCSSBCSSSCCBCC
T ss_pred CCCCCCccCCcccCCCEEccCCCHHHHHHHHHHHHCCCcCcCcCchhC
Confidence 345689999999999999999999999999999998899999999764
No 4
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.19 E-value=3.2e-11 Score=89.82 Aligned_cols=48 Identities=27% Similarity=0.566 Sum_probs=42.8
Q ss_pred CCCccccccccCCCCcEEccCCCcccHHHHHHhcc---CCCCCCCCCCCCC
Q 020671 257 SLPFACFICRKPFVDPVVTKCKHYFCEHCALKHHS---KNKKCFVCNEPTL 304 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~---~s~~CP~Cr~~t~ 304 (323)
...+.|+||++.+.+|++++|||.||..|+..|+. ....||+|+.++.
T Consensus 18 ~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 68 (73)
T 2ysl_A 18 QEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVR 68 (73)
T ss_dssp CCCCBCTTTCSBCSSEEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCC
T ss_pred ccCCEeccCCcccCCeEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCC
Confidence 34578999999999999999999999999999996 5679999998754
No 5
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=99.18 E-value=2.9e-11 Score=91.48 Aligned_cols=47 Identities=23% Similarity=0.312 Sum_probs=42.9
Q ss_pred CCccccccccCCCCcEEccCCCcccHHHHHHhccC-CCCCCCCCCCCC
Q 020671 258 LPFACFICRKPFVDPVVTKCKHYFCEHCALKHHSK-NKKCFVCNEPTL 304 (323)
Q Consensus 258 ~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~-s~~CP~Cr~~t~ 304 (323)
..+.|+||++.+.+|++++|||.||..||..|+.. ...||+|+.+..
T Consensus 7 ~~~~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~ 54 (78)
T 1t1h_A 7 EYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLL 54 (78)
T ss_dssp SSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCS
T ss_pred ccCCCCCccccccCCEEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCC
Confidence 35789999999999999999999999999999985 789999999753
No 6
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=99.18 E-value=1.1e-11 Score=104.43 Aligned_cols=46 Identities=26% Similarity=0.766 Sum_probs=43.1
Q ss_pred ccccccccCCCCcEEccCCCcccHHHHHHhccCCCCCCCCCCCCCC
Q 020671 260 FACFICRKPFVDPVVTKCKHYFCEHCALKHHSKNKKCFVCNEPTLG 305 (323)
Q Consensus 260 ~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~g 305 (323)
+.|+||++.+.+|++++|||.||..||..|+.....||+||.++..
T Consensus 54 ~~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 99 (138)
T 4ayc_A 54 LQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIECPICRKDIKS 99 (138)
T ss_dssp SBCTTTCSBCSSEEEETTSCEEEHHHHHHHTTTCSBCTTTCCBCCC
T ss_pred CCCcccCcccCCceECCCCCCccHHHHHHHHHcCCcCCCCCCcCCC
Confidence 5799999999999999999999999999999989999999998653
No 7
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=99.17 E-value=1.5e-11 Score=92.86 Aligned_cols=48 Identities=23% Similarity=0.677 Sum_probs=42.2
Q ss_pred CCCccccccccCCCCcEEcc-CCCcccHHHHHHhccCC--CCCCCCCCCCC
Q 020671 257 SLPFACFICRKPFVDPVVTK-CKHYFCEHCALKHHSKN--KKCFVCNEPTL 304 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~PVvt~-CGH~FC~~Ci~~~~~~s--~~CP~Cr~~t~ 304 (323)
...+.|+||++.+.+|++++ |||.||..||..|+... ..||+||.+..
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 63 (74)
T 2yur_A 13 PDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDV 63 (74)
T ss_dssp CGGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSC
T ss_pred CCCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCC
Confidence 34578999999999999999 99999999999999743 79999999743
No 8
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.16 E-value=2.4e-11 Score=89.39 Aligned_cols=48 Identities=31% Similarity=0.688 Sum_probs=42.8
Q ss_pred CCCccccccccCCCCcEEccCCCcccHHHHHHhcc-CCCCCCCCCCCCC
Q 020671 257 SLPFACFICRKPFVDPVVTKCKHYFCEHCALKHHS-KNKKCFVCNEPTL 304 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~-~s~~CP~Cr~~t~ 304 (323)
...+.|+||++.+.+|++++|||.||..|+..|+. ....||+|+.+..
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 61 (66)
T 2ecy_A 13 EDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPKCTACQESIV 61 (66)
T ss_dssp CCCEECTTTCCEESSCCCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCC
T ss_pred CcCCCCCCCChHhcCeeECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCC
Confidence 34578999999999999999999999999999994 6789999998753
No 9
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.16 E-value=2.5e-11 Score=90.94 Aligned_cols=48 Identities=27% Similarity=0.685 Sum_probs=43.0
Q ss_pred CCCccccccccCCCCcEEc-cCCCcccHHHHHHhccCCCCCCCCCCCCC
Q 020671 257 SLPFACFICRKPFVDPVVT-KCKHYFCEHCALKHHSKNKKCFVCNEPTL 304 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~PVvt-~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~ 304 (323)
...+.|+||++.+.+|+++ +|||.||..||..|+.....||+|+.+..
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 61 (72)
T 2djb_A 13 TPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVH 61 (72)
T ss_dssp CGGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHcCCcCCCcCcccC
Confidence 3456899999999999987 99999999999999988899999999754
No 10
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.16 E-value=5e-11 Score=86.80 Aligned_cols=43 Identities=30% Similarity=0.640 Sum_probs=39.0
Q ss_pred CCCccccccccCCCCcEEccCCCcccHHHHHHhcc---CCCCCCCC
Q 020671 257 SLPFACFICRKPFVDPVVTKCKHYFCEHCALKHHS---KNKKCFVC 299 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~---~s~~CP~C 299 (323)
...+.|+||++.+.+|++++|||.||..||.+|+. ....||+|
T Consensus 18 ~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 18 QEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCBCTTTCSBCSSCEECTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred ccCCCCCcCCchhCCeEEeCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 34578999999999999999999999999999997 56789998
No 11
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.15 E-value=4e-11 Score=90.98 Aligned_cols=48 Identities=29% Similarity=0.677 Sum_probs=42.9
Q ss_pred CCCccccccccCCCCcEEccCCCcccHHHHHHhccC------CCCCCCCCCCCC
Q 020671 257 SLPFACFICRKPFVDPVVTKCKHYFCEHCALKHHSK------NKKCFVCNEPTL 304 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~------s~~CP~Cr~~t~ 304 (323)
...+.|+||++.+.+|++++|||.||..|+..|+.. ...||+|+.+..
T Consensus 17 ~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecw_A 17 KEEVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYP 70 (85)
T ss_dssp CTTTSCTTTCSCCSSCEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCC
T ss_pred ccCCCCcCCChhhCcceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCC
Confidence 345789999999999999999999999999999875 789999998754
No 12
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=99.13 E-value=2.8e-11 Score=99.66 Aligned_cols=47 Identities=23% Similarity=0.614 Sum_probs=42.4
Q ss_pred CccccccccCCCCcEEccCCCcccHHHHHHhcc-CCCCCCCCCCCCCC
Q 020671 259 PFACFICRKPFVDPVVTKCKHYFCEHCALKHHS-KNKKCFVCNEPTLG 305 (323)
Q Consensus 259 p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~-~s~~CP~Cr~~t~g 305 (323)
.+.|+||++.+.+|++++|||.||..||..|+. ....||+||.+...
T Consensus 52 ~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 52 TFQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp HTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred CCCCCcCChHHcCcEEeeCCCcccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 468999999999999999999999999999997 45699999998754
No 13
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=99.13 E-value=3.4e-11 Score=96.13 Aligned_cols=46 Identities=26% Similarity=0.703 Sum_probs=41.7
Q ss_pred CccccccccCCCCcEE-ccCCCcccHHHHHHhccCC-CCCCCCCCCCC
Q 020671 259 PFACFICRKPFVDPVV-TKCKHYFCEHCALKHHSKN-KKCFVCNEPTL 304 (323)
Q Consensus 259 p~~C~IC~e~~~~PVv-t~CGH~FC~~Ci~~~~~~s-~~CP~Cr~~t~ 304 (323)
.+.|+||++.+.+|+. ++|||.||..||..|+... ..||+||.++.
T Consensus 22 ~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~ 69 (100)
T 3lrq_A 22 VFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQ 69 (100)
T ss_dssp HTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCccCCccccCccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCC
Confidence 4589999999999999 9999999999999999865 79999999753
No 14
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=99.12 E-value=1.1e-10 Score=94.14 Aligned_cols=47 Identities=13% Similarity=0.024 Sum_probs=43.5
Q ss_pred CCccccccccCCCCcEEccCCCcccHHHHHHhccCCCCCCCCCCCCC
Q 020671 258 LPFACFICRKPFVDPVVTKCKHYFCEHCALKHHSKNKKCFVCNEPTL 304 (323)
Q Consensus 258 ~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~ 304 (323)
..|.|+||++++.+||+++|||+||..||..|+.....||+|+.+..
T Consensus 28 ~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~ 74 (100)
T 2kre_A 28 DEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDPFNRQTLT 74 (100)
T ss_dssp TTTBCTTTCSBCSSEEEETTTEEEEHHHHHHHTTSCSBCSSSCCBCC
T ss_pred HhhCCcCccCcccCCeECCCCCEEchHHHHHHHHcCCCCCCCCCCCC
Confidence 35899999999999999999999999999999998899999999743
No 15
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=99.11 E-value=6.4e-11 Score=92.44 Aligned_cols=48 Identities=13% Similarity=0.007 Sum_probs=43.6
Q ss_pred CCCccccccccCCCCcEEccCCCcccHHHHHHhccCCCCCCCCCCCCC
Q 020671 257 SLPFACFICRKPFVDPVVTKCKHYFCEHCALKHHSKNKKCFVCNEPTL 304 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~ 304 (323)
...|.|+||++.+.+||+++|||+||..||..|+.....||+|+.+..
T Consensus 12 p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~ 59 (85)
T 2kr4_A 12 PDEFRDPLMDTLMTDPVRLPSGTVMDRSIILRHLLNSPTDPFNRQMLT 59 (85)
T ss_dssp CTTTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCC
T ss_pred chheECcccCchhcCCeECCCCCEECHHHHHHHHhcCCCCCCCcCCCC
Confidence 345899999999999999999999999999999987889999999643
No 16
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=99.11 E-value=3.1e-11 Score=91.04 Aligned_cols=47 Identities=23% Similarity=0.603 Sum_probs=42.5
Q ss_pred CCccccccccCCCCcEEccCCCcccHHHHHHhccC-------CCCCCCCCCCCC
Q 020671 258 LPFACFICRKPFVDPVVTKCKHYFCEHCALKHHSK-------NKKCFVCNEPTL 304 (323)
Q Consensus 258 ~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~-------s~~CP~Cr~~t~ 304 (323)
..+.|+||++.+.+|++++|||.||..|+..|+.. ...||+|+.++.
T Consensus 11 ~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~ 64 (79)
T 2egp_A 11 EEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYS 64 (79)
T ss_dssp CCCEETTTTEECSSCCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCC
T ss_pred cCCCCcCCCcccCCeeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCC
Confidence 35689999999999999999999999999999975 689999999764
No 17
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.10 E-value=6e-11 Score=90.00 Aligned_cols=48 Identities=29% Similarity=0.688 Sum_probs=43.0
Q ss_pred CCCccccccccCCCCcEEccCCCcccHHHHHHhccC------CCCCCCCCCCCC
Q 020671 257 SLPFACFICRKPFVDPVVTKCKHYFCEHCALKHHSK------NKKCFVCNEPTL 304 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~------s~~CP~Cr~~t~ 304 (323)
...+.|+||++.+.+|++++|||.||..|+..|+.. ...||+|+..+.
T Consensus 17 ~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecv_A 17 KEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQ 70 (85)
T ss_dssp CCCCCCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSC
T ss_pred cCCCCCCCCCcccCCceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccC
Confidence 345789999999999999999999999999999875 789999998754
No 18
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.09 E-value=9.9e-11 Score=83.27 Aligned_cols=42 Identities=29% Similarity=0.835 Sum_probs=37.9
Q ss_pred CCccccccccCCCCcEEccCCCcccHHHHHHhc---cCCCCCCCC
Q 020671 258 LPFACFICRKPFVDPVVTKCKHYFCEHCALKHH---SKNKKCFVC 299 (323)
Q Consensus 258 ~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~---~~s~~CP~C 299 (323)
..+.|+||++.+.+|++++|||.||..||..|+ .....||+|
T Consensus 14 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSSCCCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred cCCCCccCCcccCccEeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 356899999999999999999999999999994 467899998
No 19
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=99.09 E-value=4.9e-11 Score=94.43 Aligned_cols=46 Identities=26% Similarity=0.582 Sum_probs=42.6
Q ss_pred CccccccccCCCCcEEc-cCCCcccHHHHHHhccCCCCCCCCCCCCC
Q 020671 259 PFACFICRKPFVDPVVT-KCKHYFCEHCALKHHSKNKKCFVCNEPTL 304 (323)
Q Consensus 259 p~~C~IC~e~~~~PVvt-~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~ 304 (323)
.+.|+||++.+.+|+++ +|||.||..|+..|+.....||+|+....
T Consensus 22 ~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 68 (99)
T 2y43_A 22 LLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVT 68 (99)
T ss_dssp HTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCC
T ss_pred CCCcccCChhhCCcCEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCC
Confidence 46899999999999988 89999999999999998899999999765
No 20
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=99.09 E-value=3.3e-10 Score=90.98 Aligned_cols=47 Identities=17% Similarity=0.074 Sum_probs=43.4
Q ss_pred CCccccccccCCCCcEEccCC-CcccHHHHHHhccCCCCCCCCCCCCC
Q 020671 258 LPFACFICRKPFVDPVVTKCK-HYFCEHCALKHHSKNKKCFVCNEPTL 304 (323)
Q Consensus 258 ~p~~C~IC~e~~~~PVvt~CG-H~FC~~Ci~~~~~~s~~CP~Cr~~t~ 304 (323)
..|.|+||++++.+||+++|| |+||..||..|+.....||+|+.+..
T Consensus 21 ~~~~CpI~~~~m~dPV~~~cG~htf~r~cI~~~l~~~~~cP~~~~~l~ 68 (98)
T 1wgm_A 21 DEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLT 68 (98)
T ss_dssp TTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCC
T ss_pred HhcCCcCccccccCCeECCCCCeEECHHHHHHHHHhCCCCCCCCCCCC
Confidence 358999999999999999999 99999999999998889999999743
No 21
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.08 E-value=4.3e-11 Score=87.75 Aligned_cols=48 Identities=27% Similarity=0.622 Sum_probs=42.5
Q ss_pred CCCccccccccCCCCc-------EEccCCCcccHHHHHHhccCCCCCCCCCCCCC
Q 020671 257 SLPFACFICRKPFVDP-------VVTKCKHYFCEHCALKHHSKNKKCFVCNEPTL 304 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~P-------Vvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~ 304 (323)
...+.|+||++.+.+| ++++|||.||..||..|+.....||+||.+..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKIN 67 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCccC
Confidence 3456899999999887 88999999999999999988889999998753
No 22
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=99.08 E-value=8.6e-11 Score=86.88 Aligned_cols=51 Identities=25% Similarity=0.427 Sum_probs=42.8
Q ss_pred CCCccccccccCCC---CcEEccCCCcccHHHHHHhccCCCCCCCCCCCCCCch
Q 020671 257 SLPFACFICRKPFV---DPVVTKCKHYFCEHCALKHHSKNKKCFVCNEPTLGIF 307 (323)
Q Consensus 257 ~~p~~C~IC~e~~~---~PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~gvf 307 (323)
.....|+||++.+. .+++++|||.||..||..|+.....||+||......+
T Consensus 12 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 65 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEAQL 65 (69)
T ss_dssp TCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCSCC
T ss_pred CCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccCcC
Confidence 34457999999884 4578999999999999999987889999999876544
No 23
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=99.08 E-value=7.8e-11 Score=94.79 Aligned_cols=47 Identities=26% Similarity=0.725 Sum_probs=43.3
Q ss_pred CccccccccCCCCcEEc-cCCCcccHHHHHHhccCCCCCCCCCCCCCC
Q 020671 259 PFACFICRKPFVDPVVT-KCKHYFCEHCALKHHSKNKKCFVCNEPTLG 305 (323)
Q Consensus 259 p~~C~IC~e~~~~PVvt-~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~g 305 (323)
.+.|+||++.+.+|+++ +|||.||..||..|+.....||+|+.....
T Consensus 15 ~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 15 HLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHK 62 (108)
T ss_dssp GTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCS
T ss_pred cCCCccCChHHhCcCEeCCCCChhhHHHHHHHHHhCCcCcCCCccccc
Confidence 46899999999999997 999999999999999988999999998654
No 24
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=99.07 E-value=5e-11 Score=96.81 Aligned_cols=46 Identities=28% Similarity=0.625 Sum_probs=42.4
Q ss_pred CccccccccCCCCcEEccCCCcccHHHHHHhccC-CCCCCCCCCCCC
Q 020671 259 PFACFICRKPFVDPVVTKCKHYFCEHCALKHHSK-NKKCFVCNEPTL 304 (323)
Q Consensus 259 p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~-s~~CP~Cr~~t~ 304 (323)
.+.|+||++.+.+|++++|||.||..||..|+.. ...||+|+..+.
T Consensus 15 ~~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 61 (115)
T 3l11_A 15 ECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVS 61 (115)
T ss_dssp HHBCTTTCSBCSSCEECTTSCEECHHHHCCCCCTTTSBCTTTCCBCH
T ss_pred CCCCccCCcccCceeEcCCCCHHhHHHHHHHHhHCcCCCCCCCcccC
Confidence 5789999999999999999999999999999975 679999999865
No 25
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.06 E-value=1.2e-10 Score=89.47 Aligned_cols=47 Identities=28% Similarity=0.673 Sum_probs=41.7
Q ss_pred CCccccccccCCCC----cEEccCCCcccHHHHHHhccCC---CCCCCCCCCCC
Q 020671 258 LPFACFICRKPFVD----PVVTKCKHYFCEHCALKHHSKN---KKCFVCNEPTL 304 (323)
Q Consensus 258 ~p~~C~IC~e~~~~----PVvt~CGH~FC~~Ci~~~~~~s---~~CP~Cr~~t~ 304 (323)
..+.|+||++.+.+ |++++|||.||..|+..|+... ..||+||.++.
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~ 67 (88)
T 2ct2_A 14 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITR 67 (88)
T ss_dssp SCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBC
T ss_pred CCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCccc
Confidence 34689999999998 9999999999999999998753 89999999753
No 26
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=99.05 E-value=1.2e-10 Score=100.07 Aligned_cols=47 Identities=26% Similarity=0.643 Sum_probs=42.2
Q ss_pred CccccccccCCCCcEEccCCCcccHHHHHHhccCC-CCCCCCCCCCCC
Q 020671 259 PFACFICRKPFVDPVVTKCKHYFCEHCALKHHSKN-KKCFVCNEPTLG 305 (323)
Q Consensus 259 p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~s-~~CP~Cr~~t~g 305 (323)
.+.|+||++.+.+|++++|||.||..||..|+... ..||+|+.+...
T Consensus 78 ~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 125 (150)
T 1z6u_A 78 SFMCVCCQELVYQPVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQ 125 (150)
T ss_dssp HTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred CCEeecCChhhcCCEEcCCCCchhHHHHHHHHHhCCCcCCCCCccCCC
Confidence 46899999999999999999999999999999854 589999998664
No 27
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.04 E-value=1.5e-10 Score=87.49 Aligned_cols=48 Identities=19% Similarity=0.553 Sum_probs=41.4
Q ss_pred CCCccccccccCCCCc---EEccCCCcccHHHHHHhccCCCCCCCCCCCCC
Q 020671 257 SLPFACFICRKPFVDP---VVTKCKHYFCEHCALKHHSKNKKCFVCNEPTL 304 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~P---Vvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~ 304 (323)
...+.|+||++.|..+ ++++|+|.||..||.+|+.....||+||....
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 63 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLT 63 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCC
T ss_pred CCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccC
Confidence 3456899999999766 46799999999999999998899999999754
No 28
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.03 E-value=1.8e-10 Score=92.32 Aligned_cols=44 Identities=36% Similarity=0.885 Sum_probs=39.8
Q ss_pred ccccccccCCCCcEEccCCCcccHHHHHHhccCC---CCCCCCCCCC
Q 020671 260 FACFICRKPFVDPVVTKCKHYFCEHCALKHHSKN---KKCFVCNEPT 303 (323)
Q Consensus 260 ~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~s---~~CP~Cr~~t 303 (323)
+.|+||++.+.+|++++|||.||..|+..|+... ..||+|+.+.
T Consensus 22 ~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~ 68 (112)
T 1jm7_A 22 LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI 68 (112)
T ss_dssp TSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCC
T ss_pred CCCcccChhhcCeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcC
Confidence 4799999999999999999999999999999743 5899999964
No 29
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=99.03 E-value=1.1e-10 Score=82.39 Aligned_cols=46 Identities=24% Similarity=0.556 Sum_probs=41.0
Q ss_pred ccccccccCCCC----cEEccCCCcccHHHHHHhccCCCCCCCCCCCCCC
Q 020671 260 FACFICRKPFVD----PVVTKCKHYFCEHCALKHHSKNKKCFVCNEPTLG 305 (323)
Q Consensus 260 ~~C~IC~e~~~~----PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~g 305 (323)
..|+||++.+.+ +++++|||.||..|+.+|+.....||+||.+..|
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~g 55 (55)
T 2ecm_A 6 SGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPSSG 55 (55)
T ss_dssp CSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSSCC
T ss_pred CcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcCCC
Confidence 479999999966 7889999999999999999877999999987653
No 30
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=99.02 E-value=5.5e-11 Score=87.96 Aligned_cols=46 Identities=26% Similarity=0.665 Sum_probs=41.9
Q ss_pred CccccccccCCCCc-------EEccCCCcccHHHHHHhccCCCCCCCCCCCCC
Q 020671 259 PFACFICRKPFVDP-------VVTKCKHYFCEHCALKHHSKNKKCFVCNEPTL 304 (323)
Q Consensus 259 p~~C~IC~e~~~~P-------Vvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~ 304 (323)
.+.|+||++.+.+| ++++|||.||..|+..|+.....||+||.+..
T Consensus 10 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 62 (71)
T 3ng2_A 10 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKIN 62 (71)
T ss_dssp CCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCC
T ss_pred CCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccC
Confidence 45799999999888 89999999999999999988899999999754
No 31
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=99.00 E-value=1.2e-10 Score=85.71 Aligned_cols=47 Identities=26% Similarity=0.568 Sum_probs=42.3
Q ss_pred ccccccccCCCCc-EEccCCCcccHHHHHHhccCCCCCCCCCCCCCCc
Q 020671 260 FACFICRKPFVDP-VVTKCKHYFCEHCALKHHSKNKKCFVCNEPTLGI 306 (323)
Q Consensus 260 ~~C~IC~e~~~~P-Vvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~gv 306 (323)
..|+||++.+.+| ++++|||.||..|+..|+.....||+|+.+...+
T Consensus 6 ~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 53 (68)
T 1chc_A 6 ERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVESV 53 (68)
T ss_dssp CCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCCCE
T ss_pred CCCeeCCccccCCcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhHhh
Confidence 4799999999997 7889999999999999998889999999987654
No 32
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.98 E-value=2e-10 Score=85.15 Aligned_cols=46 Identities=26% Similarity=0.653 Sum_probs=41.9
Q ss_pred CCccccccccCCCCcEEccCCCcccHHHHHHhccCCCCCCCCCCCCC
Q 020671 258 LPFACFICRKPFVDPVVTKCKHYFCEHCALKHHSKNKKCFVCNEPTL 304 (323)
Q Consensus 258 ~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~ 304 (323)
..+.|+||++.+.+ ++++|||.||..|+..|+.....||+||.+..
T Consensus 14 ~~~~C~IC~~~~~~-~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 59 (70)
T 2ecn_A 14 DEEECCICMDGRAD-LILPCAHSFCQKCIDKWSDRHRNCPICRLQMT 59 (70)
T ss_dssp CCCCCSSSCCSCCS-EEETTTEEECHHHHHHSSCCCSSCHHHHHCTT
T ss_pred CCCCCeeCCcCccC-cccCCCCcccHHHHHHHHHCcCcCCCcCCccc
Confidence 35689999999998 99999999999999999999999999998754
No 33
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=98.97 E-value=1.1e-10 Score=84.41 Aligned_cols=46 Identities=26% Similarity=0.647 Sum_probs=41.4
Q ss_pred CccccccccCCCCc-------EEccCCCcccHHHHHHhccCCCCCCCCCCCCC
Q 020671 259 PFACFICRKPFVDP-------VVTKCKHYFCEHCALKHHSKNKKCFVCNEPTL 304 (323)
Q Consensus 259 p~~C~IC~e~~~~P-------Vvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~ 304 (323)
.+.|+||++.+.+| ++++|||.||..|+.+|+.....||+||.+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 55 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKIN 55 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCT
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCC
Confidence 35799999999877 88999999999999999988899999998754
No 34
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=98.97 E-value=2.5e-10 Score=98.29 Aligned_cols=47 Identities=28% Similarity=0.694 Sum_probs=42.5
Q ss_pred CCccccccccCCCCcEEc-cCCCcccHHHHHHhccC-CCCCCCCCCCCC
Q 020671 258 LPFACFICRKPFVDPVVT-KCKHYFCEHCALKHHSK-NKKCFVCNEPTL 304 (323)
Q Consensus 258 ~p~~C~IC~e~~~~PVvt-~CGH~FC~~Ci~~~~~~-s~~CP~Cr~~t~ 304 (323)
..+.|+||++.+.+|+++ +|||.||..||..|+.. ...||+|+.+..
T Consensus 53 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 101 (165)
T 2ckl_B 53 SELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLV 101 (165)
T ss_dssp HHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCC
T ss_pred CCCCCcccChHhhCcCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCC
Confidence 356899999999999987 99999999999999985 788999999864
No 35
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=98.97 E-value=2.5e-10 Score=92.82 Aligned_cols=46 Identities=37% Similarity=0.848 Sum_probs=42.1
Q ss_pred CccccccccCCCCcEEccCCCcccHHHHHHhccC-CCCCCCCCCCCC
Q 020671 259 PFACFICRKPFVDPVVTKCKHYFCEHCALKHHSK-NKKCFVCNEPTL 304 (323)
Q Consensus 259 p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~-s~~CP~Cr~~t~ 304 (323)
.+.|+||++.+.+|++++|||.||..||..|+.. ...||+|+.+..
T Consensus 23 ~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 69 (116)
T 1rmd_A 23 SISCQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPSCRYPCF 69 (116)
T ss_dssp HTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCCCCCcHhcCcEEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCC
Confidence 4689999999999999999999999999999984 789999999754
No 36
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.97 E-value=1.3e-10 Score=83.63 Aligned_cols=44 Identities=23% Similarity=0.544 Sum_probs=38.8
Q ss_pred CCccccccccCCCCcEEccCCCcccHHHHHHhccCCCCCCCCCCCCC
Q 020671 258 LPFACFICRKPFVDPVVTKCKHYFCEHCALKHHSKNKKCFVCNEPTL 304 (323)
Q Consensus 258 ~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~ 304 (323)
..+.|+||++.+.+|++++|||.||..|+..| ...||+||..+.
T Consensus 5 ~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~---~~~CP~Cr~~~~ 48 (56)
T 1bor_A 5 QFLRCQQCQAEAKCPKLLPCLHTLCSGCLEAS---GMQCPICQAPWP 48 (56)
T ss_dssp CCSSCSSSCSSCBCCSCSTTSCCSBTTTCSSS---SSSCSSCCSSSS
T ss_pred cCCCceEeCCccCCeEEcCCCCcccHHHHccC---CCCCCcCCcEee
Confidence 45689999999999999999999999999873 578999999764
No 37
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=98.96 E-value=3.7e-10 Score=88.62 Aligned_cols=47 Identities=28% Similarity=0.559 Sum_probs=41.8
Q ss_pred CCccccccccCCCC---cEEccCCCcccHHHHHHhccCCCCCCCCCCCCC
Q 020671 258 LPFACFICRKPFVD---PVVTKCKHYFCEHCALKHHSKNKKCFVCNEPTL 304 (323)
Q Consensus 258 ~p~~C~IC~e~~~~---PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~ 304 (323)
....|+||++.|.. +++++|||.||..||..|+.....||+||.+..
T Consensus 39 ~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 88 (91)
T ss_dssp SCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTTCBCTTTCCBSS
T ss_pred CCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcCCcCcCcCccCC
Confidence 34589999999877 778899999999999999998899999998764
No 38
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.96 E-value=3e-10 Score=85.00 Aligned_cols=50 Identities=32% Similarity=0.638 Sum_probs=42.2
Q ss_pred CCccccccccCCCCcE---EccCCCcccHHHHHHhccCCCCCCCCCCCCCCch
Q 020671 258 LPFACFICRKPFVDPV---VTKCKHYFCEHCALKHHSKNKKCFVCNEPTLGIF 307 (323)
Q Consensus 258 ~p~~C~IC~e~~~~PV---vt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~gvf 307 (323)
....|+||++.+..+. +++|+|.||..||.+|+.....||+||.+...+.
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~~~~ 66 (74)
T 2ep4_A 14 LHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQLA 66 (74)
T ss_dssp CSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCSSCC
T ss_pred CCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCccccccc
Confidence 3457999999997764 4499999999999999987789999999876543
No 39
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=98.95 E-value=5.6e-10 Score=78.77 Aligned_cols=44 Identities=20% Similarity=0.490 Sum_probs=39.5
Q ss_pred ccccccccCCCC---cEEcc-CCCcccHHHHHHhccCCCCCCCCCCCC
Q 020671 260 FACFICRKPFVD---PVVTK-CKHYFCEHCALKHHSKNKKCFVCNEPT 303 (323)
Q Consensus 260 ~~C~IC~e~~~~---PVvt~-CGH~FC~~Ci~~~~~~s~~CP~Cr~~t 303 (323)
..|+||++.+.. ++.++ |||.||..|+.+|+.....||+||.+.
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~ 53 (55)
T 1iym_A 6 VECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTV 53 (55)
T ss_dssp CCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCS
T ss_pred CcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEe
Confidence 469999999977 67776 999999999999999899999999864
No 40
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.93 E-value=2.5e-10 Score=93.30 Aligned_cols=44 Identities=30% Similarity=0.747 Sum_probs=40.4
Q ss_pred CccccccccCCCCcEEc-cCCCcccHHHHHHhccCCCCCCCCCCCCC
Q 020671 259 PFACFICRKPFVDPVVT-KCKHYFCEHCALKHHSKNKKCFVCNEPTL 304 (323)
Q Consensus 259 p~~C~IC~e~~~~PVvt-~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~ 304 (323)
.+.|+||++.+.+|+++ +|||+||..||..|+. ..||+|+.+..
T Consensus 22 ~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~--~~CP~Cr~~~~ 66 (117)
T 1jm7_B 22 LLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIG--TGCPVCYTPAW 66 (117)
T ss_dssp TTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTT--TBCSSSCCBCS
T ss_pred CCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhc--CCCcCCCCcCc
Confidence 46899999999999999 9999999999999987 78999999763
No 41
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.92 E-value=3.2e-10 Score=85.38 Aligned_cols=47 Identities=26% Similarity=0.526 Sum_probs=41.5
Q ss_pred CCccccccccCCCCc---EEccCCCcccHHHHHHhccCCCCCCCCCCCCC
Q 020671 258 LPFACFICRKPFVDP---VVTKCKHYFCEHCALKHHSKNKKCFVCNEPTL 304 (323)
Q Consensus 258 ~p~~C~IC~e~~~~P---Vvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~ 304 (323)
....|+||++.+..+ ++++|+|.||..||..|+.....||+||.+..
T Consensus 22 ~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 22 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSG 71 (75)
T ss_dssp SCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCC
Confidence 345799999999877 67899999999999999998889999998754
No 42
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.91 E-value=5.7e-10 Score=81.73 Aligned_cols=45 Identities=27% Similarity=0.648 Sum_probs=38.9
Q ss_pred cccccccc-CCCCc----EEccCCCcccHHHHHHhcc-CCCCCCCCCCCCC
Q 020671 260 FACFICRK-PFVDP----VVTKCKHYFCEHCALKHHS-KNKKCFVCNEPTL 304 (323)
Q Consensus 260 ~~C~IC~e-~~~~P----Vvt~CGH~FC~~Ci~~~~~-~s~~CP~Cr~~t~ 304 (323)
+.|+||++ .+.+| ++++|||.||..|+.+|+. ....||+|+.+..
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 54 (65)
T 1g25_A 4 QGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLR 54 (65)
T ss_dssp TCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCS
T ss_pred CcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCccc
Confidence 57999999 88888 5789999999999999965 5578999999754
No 43
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.89 E-value=6.5e-10 Score=88.05 Aligned_cols=45 Identities=24% Similarity=0.526 Sum_probs=39.4
Q ss_pred CCccccccccCCCCcEEcc-CCCcccHHHHHHhccC------CCCCCC--CCCC
Q 020671 258 LPFACFICRKPFVDPVVTK-CKHYFCEHCALKHHSK------NKKCFV--CNEP 302 (323)
Q Consensus 258 ~p~~C~IC~e~~~~PVvt~-CGH~FC~~Ci~~~~~~------s~~CP~--Cr~~ 302 (323)
..|.|+||++++.+||+++ |||+||..||..|+.. ...||+ |+..
T Consensus 6 ~~~~CPI~~~~~~dPV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 6 SGFTCPITKEEMKKPVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHT 59 (94)
T ss_dssp SCCBCTTTCSBCSSEEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCC
T ss_pred cEeECcCcCchhcCCEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCccc
Confidence 3578999999999999995 9999999999999973 369999 9743
No 44
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=98.88 E-value=4.6e-10 Score=91.83 Aligned_cols=48 Identities=35% Similarity=0.662 Sum_probs=42.5
Q ss_pred CCccccccccCCCCcEEccCCCcccHHHHHHhccCC-CCCCCCCCCCCC
Q 020671 258 LPFACFICRKPFVDPVVTKCKHYFCEHCALKHHSKN-KKCFVCNEPTLG 305 (323)
Q Consensus 258 ~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~s-~~CP~Cr~~t~g 305 (323)
..+.|+||++.+.+|++++|||.||..||..|+... ..||+|+.+...
T Consensus 17 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (118)
T 3hct_A 17 SKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE 65 (118)
T ss_dssp GGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCcCChhhcCeEECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCH
Confidence 357899999999999999999999999999999744 499999997653
No 45
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=98.87 E-value=1e-09 Score=88.67 Aligned_cols=45 Identities=27% Similarity=0.484 Sum_probs=38.8
Q ss_pred ccccccccCCCCcE------------------EccCCCcccHHHHHHhc-----cCCCCCCCCCCCCC
Q 020671 260 FACFICRKPFVDPV------------------VTKCKHYFCEHCALKHH-----SKNKKCFVCNEPTL 304 (323)
Q Consensus 260 ~~C~IC~e~~~~PV------------------vt~CGH~FC~~Ci~~~~-----~~s~~CP~Cr~~t~ 304 (323)
..|+||++.|..|. +++|+|.||..||..|+ .....||+||....
T Consensus 26 ~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~ 93 (114)
T 1v87_A 26 EDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYG 93 (114)
T ss_dssp CEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSS
T ss_pred CcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccC
Confidence 37999999997664 78999999999999999 45789999998654
No 46
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.86 E-value=8.9e-10 Score=100.31 Aligned_cols=49 Identities=12% Similarity=0.010 Sum_probs=42.6
Q ss_pred CCCCccccccccCCCCcEEccCCCcccHHHHHHhccC-CCCCCCCCCCCC
Q 020671 256 DSLPFACFICRKPFVDPVVTKCKHYFCEHCALKHHSK-NKKCFVCNEPTL 304 (323)
Q Consensus 256 e~~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~-s~~CP~Cr~~t~ 304 (323)
....|.|+||++.+.+||+++|||+||..||..|+.. ...||+|+.+..
T Consensus 205 ~~~~~~c~i~~~~~~dPv~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~ 254 (281)
T 2c2l_A 205 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLT 254 (281)
T ss_dssp CCSTTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCC
T ss_pred CCcccCCcCcCCHhcCCeECCCCCEECHHHHHHHHHHCCCCCcCCCCCCc
Confidence 3456799999999999999999999999999999974 445999999754
No 47
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=98.85 E-value=7.4e-10 Score=90.32 Aligned_cols=46 Identities=26% Similarity=0.665 Sum_probs=42.3
Q ss_pred CccccccccCCCCc-------EEccCCCcccHHHHHHhccCCCCCCCCCCCCC
Q 020671 259 PFACFICRKPFVDP-------VVTKCKHYFCEHCALKHHSKNKKCFVCNEPTL 304 (323)
Q Consensus 259 p~~C~IC~e~~~~P-------Vvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~ 304 (323)
.+.|+||++.+.+| ++++|||.||..||.+|+.....||+|+..+.
T Consensus 7 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 59 (133)
T 4ap4_A 7 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKIN 59 (133)
T ss_dssp SCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTCSBCTTTCCBCT
T ss_pred CCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhCCCCCCCCCcCc
Confidence 46899999999988 99999999999999999998899999999754
No 48
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=98.82 E-value=1.2e-09 Score=82.75 Aligned_cols=45 Identities=27% Similarity=0.466 Sum_probs=40.1
Q ss_pred CccccccccCCCCcEEccCCCc-ccHHHHHHhccCCCCCCCCCCCCCCch
Q 020671 259 PFACFICRKPFVDPVVTKCKHY-FCEHCALKHHSKNKKCFVCNEPTLGIF 307 (323)
Q Consensus 259 p~~C~IC~e~~~~PVvt~CGH~-FC~~Ci~~~~~~s~~CP~Cr~~t~gvf 307 (323)
.+.|+||++.+.+|++++|||. ||..|+..| ..||+||.++..+.
T Consensus 24 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~~~ 69 (74)
T 4ic3_A 24 EKLCKICMDRNIAIVFVPCGHLVTCKQCAEAV----DKCPMCYTVITFKQ 69 (74)
T ss_dssp HTBCTTTSSSBCCEEEETTCCBCCCHHHHTTC----SBCTTTCCBCSEEE
T ss_pred CCCCCCCCCCCCCEEEcCCCChhHHHHhhhcC----ccCCCcCcCccCcE
Confidence 3579999999999999999999 999999987 78999999876543
No 49
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=98.80 E-value=6.2e-10 Score=94.69 Aligned_cols=47 Identities=23% Similarity=0.654 Sum_probs=41.8
Q ss_pred CCCccccccccCCCCcEEccCCCcccHHHHHHhccCC-CCCCCCCCCC
Q 020671 257 SLPFACFICRKPFVDPVVTKCKHYFCEHCALKHHSKN-KKCFVCNEPT 303 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~s-~~CP~Cr~~t 303 (323)
...+.|+||++.+.+|+.++|||.||..||..|+... ..||+||.+.
T Consensus 29 ~~~~~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~ 76 (141)
T 3knv_A 29 EAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEG 76 (141)
T ss_dssp CGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHGGGSCEECHHHHHTT
T ss_pred CcCcCCCCCChhhcCcEECCCCCccCHHHHHHHHhcCCCCCCCCCCcc
Confidence 3467999999999999999999999999999999744 5899999864
No 50
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=98.77 E-value=1.7e-09 Score=79.85 Aligned_cols=49 Identities=22% Similarity=0.482 Sum_probs=43.2
Q ss_pred CccccccccCCCCcEEc--cCCCc-ccHHHHHHhccCCCCCCCCCCCCCCch
Q 020671 259 PFACFICRKPFVDPVVT--KCKHY-FCEHCALKHHSKNKKCFVCNEPTLGIF 307 (323)
Q Consensus 259 p~~C~IC~e~~~~PVvt--~CGH~-FC~~Ci~~~~~~s~~CP~Cr~~t~gvf 307 (323)
...|.||++.+.+++++ +|||. ||..|+..+......||+||.+...+.
T Consensus 7 ~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i 58 (63)
T 2vje_B 7 LKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLVI 58 (63)
T ss_dssp GSBCTTTSSSBSCEEEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCCEEE
T ss_pred CCCCcccCCcCCCeEEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhhceE
Confidence 34799999999999887 99998 999999999887889999999876543
No 51
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.75 E-value=3.7e-09 Score=80.02 Aligned_cols=44 Identities=27% Similarity=0.496 Sum_probs=38.7
Q ss_pred CccccccccCCCCcEEccCCCc-ccHHHHHHhccCCCCCCCCCCCCCCc
Q 020671 259 PFACFICRKPFVDPVVTKCKHY-FCEHCALKHHSKNKKCFVCNEPTLGI 306 (323)
Q Consensus 259 p~~C~IC~e~~~~PVvt~CGH~-FC~~Ci~~~~~~s~~CP~Cr~~t~gv 306 (323)
.+.|+||++.+.+|++++|||. ||..|+... ..||+||.+...+
T Consensus 25 ~~~C~IC~~~~~~~~~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~~ 69 (75)
T 2ecg_A 25 EKLCKICMDRNIAIVFVPCGHLVTCKQCAEAV----DKCPMCYTVITFK 69 (75)
T ss_dssp HHSCSSSCSSCCCBCCSSSCCCCBCHHHHHHC----SBCTTTCCBCCCC
T ss_pred CCCCCcCCCCCCCEEEecCCCHHHHHHHhhCC----CCCccCCceecCc
Confidence 3479999999999999999999 999999753 7899999987654
No 52
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=98.74 E-value=3e-09 Score=78.73 Aligned_cols=48 Identities=33% Similarity=0.607 Sum_probs=42.9
Q ss_pred ccccccccCCCCcEEc--cCCCc-ccHHHHHHhccCCCCCCCCCCCCCCch
Q 020671 260 FACFICRKPFVDPVVT--KCKHY-FCEHCALKHHSKNKKCFVCNEPTLGIF 307 (323)
Q Consensus 260 ~~C~IC~e~~~~PVvt--~CGH~-FC~~Ci~~~~~~s~~CP~Cr~~t~gvf 307 (323)
..|.||++.+.+++++ +|||. ||..|+..|......||+||.+...+.
T Consensus 9 ~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i 59 (64)
T 2vje_A 9 EPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 59 (64)
T ss_dssp SCCTTTSSSCSCEEEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCCEEE
T ss_pred CCCCcCCCCCCCEEEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchhceE
Confidence 3699999999999987 99999 899999999988889999999876543
No 53
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=98.74 E-value=9.5e-09 Score=96.31 Aligned_cols=47 Identities=23% Similarity=0.571 Sum_probs=41.7
Q ss_pred CCCCccccccccCCCCcEEc-cCCCcccHHHHHHhccC--CCCCCC--CCCC
Q 020671 256 DSLPFACFICRKPFVDPVVT-KCKHYFCEHCALKHHSK--NKKCFV--CNEP 302 (323)
Q Consensus 256 e~~p~~C~IC~e~~~~PVvt-~CGH~FC~~Ci~~~~~~--s~~CP~--Cr~~ 302 (323)
....+.||||+..|.+||++ .|||+||..||..|+.. ...||+ |+..
T Consensus 178 ~~~el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~ 229 (267)
T 3htk_C 178 GKIELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQV 229 (267)
T ss_dssp SBCCSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCE
T ss_pred CceeeECcCccCcccCCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCc
Confidence 46678999999999999985 99999999999999974 468999 9985
No 54
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.74 E-value=9.9e-09 Score=77.00 Aligned_cols=46 Identities=24% Similarity=0.613 Sum_probs=40.1
Q ss_pred CCccccccccCCCCcEEccCCCc-ccHHHHHHhccCCCCCCCCCCCCCCch
Q 020671 258 LPFACFICRKPFVDPVVTKCKHY-FCEHCALKHHSKNKKCFVCNEPTLGIF 307 (323)
Q Consensus 258 ~p~~C~IC~e~~~~PVvt~CGH~-FC~~Ci~~~~~~s~~CP~Cr~~t~gvf 307 (323)
....|.||++.+.++++++|||. ||..|+.. ...||+||.++..++
T Consensus 14 ~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~----~~~CP~CR~~i~~~~ 60 (68)
T 2ea5_A 14 NSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKY----FQQCPMCRQFVQESF 60 (68)
T ss_dssp CSSCCSSSSSSCCCCEETTTTBCCSCTTHHHH----CSSCTTTCCCCCCEE
T ss_pred CCCCCCCcCcCCCCEEEECCCChhhhHHHHhc----CCCCCCCCcchhceE
Confidence 34579999999999999999999 99999995 378999999876654
No 55
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=98.72 E-value=9.9e-09 Score=79.19 Aligned_cols=47 Identities=26% Similarity=0.596 Sum_probs=37.9
Q ss_pred CCccccccccCCC--CcEEcc--CCCcccHHHHHHhcc-CCCCCCCCCCCCC
Q 020671 258 LPFACFICRKPFV--DPVVTK--CKHYFCEHCALKHHS-KNKKCFVCNEPTL 304 (323)
Q Consensus 258 ~p~~C~IC~e~~~--~PVvt~--CGH~FC~~Ci~~~~~-~s~~CP~Cr~~t~ 304 (323)
..+.|+||++.+. ++++++ |||.||..|+..++. ....||+||.+..
T Consensus 10 ~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~ 61 (78)
T 1e4u_A 10 DPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYP 61 (78)
T ss_dssp CCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCS
T ss_pred cCCcCCccCccCccccccccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccC
Confidence 3468999999884 445555 999999999999875 5689999999754
No 56
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.69 E-value=1.4e-08 Score=78.19 Aligned_cols=44 Identities=32% Similarity=0.702 Sum_probs=37.2
Q ss_pred cccccccCCCC--------------cEEc-cCCCcccHHHHHHhccCCCCCCCCCCCCC
Q 020671 261 ACFICRKPFVD--------------PVVT-KCKHYFCEHCALKHHSKNKKCFVCNEPTL 304 (323)
Q Consensus 261 ~C~IC~e~~~~--------------PVvt-~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~ 304 (323)
.|+||++.|.. ++++ +|+|.|+..||.+|+.....||+||.+..
T Consensus 17 ~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~ 75 (81)
T 2ecl_A 17 TCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWV 75 (81)
T ss_dssp CBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCCBCTTTCCBCC
T ss_pred CCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCCCCCCcCCCcc
Confidence 58888888865 4444 69999999999999998899999998754
No 57
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.69 E-value=7.4e-09 Score=91.98 Aligned_cols=48 Identities=13% Similarity=0.027 Sum_probs=42.0
Q ss_pred CCCccccccccCCCCcEEccCCCcccHHHHHHhccC-CCCCCCCCCCCC
Q 020671 257 SLPFACFICRKPFVDPVVTKCKHYFCEHCALKHHSK-NKKCFVCNEPTL 304 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~-s~~CP~Cr~~t~ 304 (323)
...|.|+||++++.+||+++|||+||..||..|+.. ...||+|+.+..
T Consensus 104 p~~f~CPI~~elm~DPV~~~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~ 152 (179)
T 2f42_A 104 PDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLT 152 (179)
T ss_dssp CGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred cHhhcccCccccCCCCeECCCCCEECHHHHHHHHHhCCCCCCCCcCCCC
Confidence 345799999999999999999999999999999974 346999999743
No 58
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=98.65 E-value=6.7e-09 Score=89.64 Aligned_cols=49 Identities=35% Similarity=0.655 Sum_probs=42.8
Q ss_pred CCCccccccccCCCCcEEccCCCcccHHHHHHhccC-CCCCCCCCCCCCC
Q 020671 257 SLPFACFICRKPFVDPVVTKCKHYFCEHCALKHHSK-NKKCFVCNEPTLG 305 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~-s~~CP~Cr~~t~g 305 (323)
...+.|+||++.+.+|+.++|||.||..||..|+.. ...||+|+.+...
T Consensus 16 ~~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (170)
T 3hcs_A 16 ESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE 65 (170)
T ss_dssp CGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCCCCChhhcCcEECCCCCHHHHHHHHHHHHhCCCCCCCCccCcch
Confidence 345799999999999999999999999999999874 4599999997654
No 59
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=98.64 E-value=1.3e-08 Score=100.15 Aligned_cols=46 Identities=24% Similarity=0.565 Sum_probs=42.6
Q ss_pred ccccccccCCCCcEEccCCCcccHHHHHHhcc-CCCCCCCCCCCCCC
Q 020671 260 FACFICRKPFVDPVVTKCKHYFCEHCALKHHS-KNKKCFVCNEPTLG 305 (323)
Q Consensus 260 ~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~-~s~~CP~Cr~~t~g 305 (323)
..|+||++.+.+|++++|||.||..|+..|.. ....||+||.+...
T Consensus 333 ~~C~ICle~~~~pv~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~ 379 (389)
T 2y1n_A 333 QLCKICAENDKDVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKG 379 (389)
T ss_dssp SBCTTTSSSBCCEEEETTCCEECHHHHHHHHHHTCSBCTTTCCBCCE
T ss_pred CCCCccCcCCCCeEEeCCCChhhHHHHHHHHhcCCCCCCCCCCccCC
Confidence 68999999999999999999999999999988 78899999997654
No 60
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=98.56 E-value=1.2e-08 Score=83.04 Aligned_cols=46 Identities=26% Similarity=0.665 Sum_probs=41.4
Q ss_pred CccccccccCCCCc-------EEccCCCcccHHHHHHhccCCCCCCCCCCCCC
Q 020671 259 PFACFICRKPFVDP-------VVTKCKHYFCEHCALKHHSKNKKCFVCNEPTL 304 (323)
Q Consensus 259 p~~C~IC~e~~~~P-------Vvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~ 304 (323)
.+.|+||++.+..| +.++|||.||..|+.+|+.....||+||.+..
T Consensus 72 ~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 124 (133)
T 4ap4_A 72 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKIN 124 (133)
T ss_dssp SCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHHCSBCTTTCCBCC
T ss_pred CCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHcCCCCCCCCCcCC
Confidence 45799999999877 88999999999999999998899999998753
No 61
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=98.55 E-value=2.2e-08 Score=77.15 Aligned_cols=42 Identities=26% Similarity=0.710 Sum_probs=38.0
Q ss_pred cccccccCCCCcEEccCCCc-ccHHHHHHhccCCCCCCCCCCCCCCc
Q 020671 261 ACFICRKPFVDPVVTKCKHY-FCEHCALKHHSKNKKCFVCNEPTLGI 306 (323)
Q Consensus 261 ~C~IC~e~~~~PVvt~CGH~-FC~~Ci~~~~~~s~~CP~Cr~~t~gv 306 (323)
.|+||++.+.++++++|||. ||..|+..+ ..||+||.+...+
T Consensus 20 ~C~IC~~~~~~~v~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~~ 62 (79)
T 2yho_A 20 LCMVCCEEEINSTFCPCGHTVCCESCAAQL----QSCPVCRSRVEHV 62 (79)
T ss_dssp BCTTTSSSBCCEEEETTCBCCBCHHHHTTC----SBCTTTCCBCCEE
T ss_pred EeEEeCcccCcEEEECCCCHHHHHHHHHhc----CcCCCCCchhhCe
Confidence 69999999999999999999 999999876 3899999986654
No 62
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=98.52 E-value=6.9e-08 Score=78.67 Aligned_cols=44 Identities=27% Similarity=0.480 Sum_probs=38.8
Q ss_pred ccccccccCCCCc------------------EEccCCCcccHHHHHHhccCCCCCCCCCCCC
Q 020671 260 FACFICRKPFVDP------------------VVTKCKHYFCEHCALKHHSKNKKCFVCNEPT 303 (323)
Q Consensus 260 ~~C~IC~e~~~~P------------------Vvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t 303 (323)
..|.||++.|..+ ++++|+|.|+..||..|+.....||+||.+.
T Consensus 38 d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~~ 99 (106)
T 3dpl_R 38 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREW 99 (106)
T ss_dssp CCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBC
T ss_pred CCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCcc
Confidence 3699999998765 4579999999999999999899999999974
No 63
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=98.34 E-value=1.2e-07 Score=69.81 Aligned_cols=46 Identities=22% Similarity=0.226 Sum_probs=40.8
Q ss_pred CCccccccccCCCCcEEc-cCCCcccHHHHHHhccCCCCCCCCCCCC
Q 020671 258 LPFACFICRKPFVDPVVT-KCKHYFCEHCALKHHSKNKKCFVCNEPT 303 (323)
Q Consensus 258 ~p~~C~IC~e~~~~PVvt-~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t 303 (323)
..|.|+||++.+.+||++ .|||.||..||.+|+.....||+++.+.
T Consensus 2 ~~~~CpIs~~~m~dPV~~~~sG~~yer~~I~~~l~~~~~cP~t~~~L 48 (61)
T 2bay_A 2 SHMLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPL 48 (61)
T ss_dssp --CCCTTTCSCCSSEEEETTTTEEEEHHHHHHHHHHHSBCTTTCCBC
T ss_pred CeEEecCCCCCCCCCEEeCCCCcEEcHHHHHHHHHhCCCCcCCcCCC
Confidence 357899999999999999 9999999999999998667799999864
No 64
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=98.34 E-value=9.1e-08 Score=92.63 Aligned_cols=45 Identities=29% Similarity=0.643 Sum_probs=40.5
Q ss_pred CccccccccCCCCcEEccCCCc-ccHHHHHHhccCCCCCCCCCCCCCCch
Q 020671 259 PFACFICRKPFVDPVVTKCKHY-FCEHCALKHHSKNKKCFVCNEPTLGIF 307 (323)
Q Consensus 259 p~~C~IC~e~~~~PVvt~CGH~-FC~~Ci~~~~~~s~~CP~Cr~~t~gvf 307 (323)
.+.|+||++.+.+|+.++|||. ||..|+..| ..||+||.++..+.
T Consensus 295 ~~~C~IC~~~~~~~v~lpCgH~~fC~~C~~~~----~~CP~CR~~i~~~~ 340 (345)
T 3t6p_A 295 ERTCKVCMDKEVSVVFIPCGHLVVCQECAPSL----RKCPICRGIIKGTV 340 (345)
T ss_dssp TCBCTTTSSSBCCEEEETTCCEEECTTTGGGC----SBCTTTCCBCCEEE
T ss_pred CCCCCccCCcCCceEEcCCCChhHhHHHHhcC----CcCCCCCCCccCeE
Confidence 4689999999999999999999 999999987 68999999876553
No 65
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.24 E-value=3.8e-07 Score=71.49 Aligned_cols=44 Identities=20% Similarity=0.517 Sum_probs=37.1
Q ss_pred CccccccccCCCCcEEc---cCCCcccHHHHHHhcc--------CCCCCCC--CCCC
Q 020671 259 PFACFICRKPFVDPVVT---KCKHYFCEHCALKHHS--------KNKKCFV--CNEP 302 (323)
Q Consensus 259 p~~C~IC~e~~~~PVvt---~CGH~FC~~Ci~~~~~--------~s~~CP~--Cr~~ 302 (323)
.+.|+||++.+..|.++ +|||.||..|+..++. ....||. |+..
T Consensus 5 ~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 5 SSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 56899999999888654 7999999999999986 1358999 9887
No 66
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=98.16 E-value=2.9e-07 Score=76.46 Aligned_cols=44 Identities=30% Similarity=0.505 Sum_probs=0.0
Q ss_pred ccccccccCCCCc-----------------E-EccCCCcccHHHHHHhccCCCCCCCCCCCC
Q 020671 260 FACFICRKPFVDP-----------------V-VTKCKHYFCEHCALKHHSKNKKCFVCNEPT 303 (323)
Q Consensus 260 ~~C~IC~e~~~~P-----------------V-vt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t 303 (323)
..|.||++.|..+ + .++|+|.|+..||..|+.....||+||.+.
T Consensus 49 d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~~ 110 (117)
T 4a0k_B 49 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREW 110 (117)
T ss_dssp --------------------------------------------------------------
T ss_pred CcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCee
Confidence 3799999999763 2 258999999999999999889999999874
No 67
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.11 E-value=2.5e-06 Score=66.06 Aligned_cols=45 Identities=22% Similarity=0.544 Sum_probs=38.3
Q ss_pred ccccccccCC--CCcEEccCC-----CcccHHHHHHhccC--CCCCCCCCCCCC
Q 020671 260 FACFICRKPF--VDPVVTKCK-----HYFCEHCALKHHSK--NKKCFVCNEPTL 304 (323)
Q Consensus 260 ~~C~IC~e~~--~~PVvt~CG-----H~FC~~Ci~~~~~~--s~~CP~Cr~~t~ 304 (323)
..|.||++.+ .++++++|. |+|...||.+|+.. ...||+|+....
T Consensus 16 ~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~ 69 (80)
T 2d8s_A 16 DICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFI 69 (80)
T ss_dssp CCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCC
T ss_pred CCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeee
Confidence 4799999887 468889996 99999999999974 469999998754
No 68
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=97.62 E-value=2.9e-05 Score=62.95 Aligned_cols=46 Identities=35% Similarity=0.714 Sum_probs=37.9
Q ss_pred cccccccCCCCc-EEccCCCcccHHHHHHhcc-CCCCCCCCCCCCCCc
Q 020671 261 ACFICRKPFVDP-VVTKCKHYFCEHCALKHHS-KNKKCFVCNEPTLGI 306 (323)
Q Consensus 261 ~C~IC~e~~~~P-Vvt~CGH~FC~~Ci~~~~~-~s~~CP~Cr~~t~gv 306 (323)
-|++|.-++..- .+++|.|.||..|+..|.. ....||.|+.++..|
T Consensus 3 fC~~C~~Pi~iygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~rV 50 (101)
T 3vk6_A 3 FCDKCGLPIKVYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRI 50 (101)
T ss_dssp BCTTTCSBCSEEEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCSEE
T ss_pred ecCccCCCeEEEeeeccccccHHHHHHHHHHhccCCCCcCcCCeeeee
Confidence 488999887644 5789999999999999874 679999999976544
No 69
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.50 E-value=0.00015 Score=55.55 Aligned_cols=44 Identities=23% Similarity=0.444 Sum_probs=37.4
Q ss_pred cccccccCCCCcEE-ccCCCcccHHHHHHhccCC--CCCCCCCCCCC
Q 020671 261 ACFICRKPFVDPVV-TKCKHYFCEHCALKHHSKN--KKCFVCNEPTL 304 (323)
Q Consensus 261 ~C~IC~e~~~~PVv-t~CGH~FC~~Ci~~~~~~s--~~CP~Cr~~t~ 304 (323)
.|.||+..+..-+. ..|+|.|-..||.+|++.. ..||+|+.+..
T Consensus 17 ~C~IC~~~i~~g~~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~ 63 (74)
T 2ct0_A 17 ICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWP 63 (74)
T ss_dssp BCSSSCCBCSSSEECSSSCCEECHHHHHHHSTTCSSCCCTTTCSCCC
T ss_pred cCcchhhHcccCCccCCCCchhhHHHHHHHHHhcCCCCCCCCcCcCC
Confidence 69999999975543 3899999999999999865 89999998744
No 70
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=97.20 E-value=0.0002 Score=52.34 Aligned_cols=45 Identities=18% Similarity=0.453 Sum_probs=37.4
Q ss_pred ccccccccCCCCcEEccCC--C---cccHHHHHHhcc--CCCCCCCCCCCCC
Q 020671 260 FACFICRKPFVDPVVTKCK--H---YFCEHCALKHHS--KNKKCFVCNEPTL 304 (323)
Q Consensus 260 ~~C~IC~e~~~~PVvt~CG--H---~FC~~Ci~~~~~--~s~~CP~Cr~~t~ 304 (323)
..|.||+....++++++|. + +|-..|+.+|+. .+..||+|+....
T Consensus 7 ~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~ 58 (60)
T 1vyx_A 7 PVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp CEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeee
Confidence 3799999887778888865 4 899999999987 5789999988653
No 71
>1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A
Probab=97.06 E-value=0.00027 Score=53.34 Aligned_cols=32 Identities=38% Similarity=1.108 Sum_probs=27.7
Q ss_pred ccCCCCccccccccccCCCCccceeecccccc
Q 020671 184 DYQPDICKDYKETGYCGYGDSCKFMHDRGDYK 215 (323)
Q Consensus 184 DyqPDiCKdYkeTG~CgfGDsCkFlHdR~dyk 215 (323)
.|.-.+|+.|..+|.|.||+.|+|+|+...+.
T Consensus 9 ~~kt~~C~~f~~~G~C~~G~~C~f~H~~~e~~ 40 (77)
T 1m9o_A 9 RYKTELCRTYSESGRCRYGAKCQFAHGLGELR 40 (77)
T ss_dssp CCCSCCCSGGGGTSCCTTTTTCSSCSSSCCGG
T ss_pred CccchhCHHhhhCCCcCCCCCccCCCCChhhc
Confidence 46678999998899999999999999987543
No 72
>2d9m_A Zinc finger CCCH-type domain containing protein 7A; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.59 E-value=0.00058 Score=51.78 Aligned_cols=24 Identities=46% Similarity=1.017 Sum_probs=22.4
Q ss_pred CCccccccccccCCCCccceeeccc
Q 020671 188 DICKDYKETGYCGYGDSCKFMHDRG 212 (323)
Q Consensus 188 DiCKdYkeTG~CgfGDsCkFlHdR~ 212 (323)
-+|+.| ++|.|.||+.|.|.|+..
T Consensus 21 ~LC~~~-~~G~C~~G~~C~FAHG~~ 44 (69)
T 2d9m_A 21 SICDRY-MNGTCPEGNSCKFAHGNA 44 (69)
T ss_dssp SBCHHH-HHSCCSSCSSCSSBSSHH
T ss_pred ccCccc-CcCCCCCCCccCCcCCHH
Confidence 899999 899999999999999876
No 73
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=96.45 E-value=0.00062 Score=66.25 Aligned_cols=51 Identities=22% Similarity=0.379 Sum_probs=39.1
Q ss_pred CCCccccccccCCCC----cE----EccCCCcccHHHHHHhccCC-----------CCCCCCCCCCCCch
Q 020671 257 SLPFACFICRKPFVD----PV----VTKCKHYFCEHCALKHHSKN-----------KKCFVCNEPTLGIF 307 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~----PV----vt~CGH~FC~~Ci~~~~~~s-----------~~CP~Cr~~t~gvf 307 (323)
+....|.||...+.. |. .+.|+|.|...|+.+|++.. ..||.|+.+..--|
T Consensus 306 e~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~sf 375 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLSTSF 375 (381)
T ss_dssp CSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEGGG
T ss_pred cCCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCCccH
Confidence 345579999998865 32 24899999999999999721 47999999765444
No 74
>1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A
Probab=96.32 E-value=0.00062 Score=51.29 Aligned_cols=29 Identities=34% Similarity=1.041 Sum_probs=0.0
Q ss_pred ccCCCCccccccccccCCCCccceeeccc
Q 020671 184 DYQPDICKDYKETGYCGYGDSCKFMHDRG 212 (323)
Q Consensus 184 DyqPDiCKdYkeTG~CgfGDsCkFlHdR~ 212 (323)
.|..-+|+.|..+|+|.||+.|+|+|...
T Consensus 47 ~~k~~~C~~f~~~G~C~~G~~C~f~H~~~ 75 (77)
T 1m9o_A 47 KYKTELCHKFKLQGRCPYGSRCHFIHNPT 75 (77)
T ss_dssp -----------------------------
T ss_pred cccCCcccchhhCcCCCCcCcCCCCCCCC
Confidence 34456899999999999999999999864
No 75
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=95.98 E-value=0.0023 Score=51.22 Aligned_cols=26 Identities=46% Similarity=0.736 Sum_probs=21.3
Q ss_pred CCCccccccccccCCCCccceeeccc
Q 020671 187 PDICKDYKETGYCGYGDSCKFMHDRG 212 (323)
Q Consensus 187 PDiCKdYkeTG~CgfGDsCkFlHdR~ 212 (323)
-.+|+.|..+|+|.||+.|+|+|...
T Consensus 36 ~~~C~~f~~~G~C~~G~~C~f~H~~~ 61 (98)
T 2cqe_A 36 DFPCKLYHTTGNCINGDDCMFSHDPL 61 (98)
T ss_dssp SSBCSHHHHTSCCSSCTTCSSBCCCC
T ss_pred CCcCcCcccCCcCCCCCCCcccCCCC
Confidence 46788887788899888899988865
No 76
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=95.93 E-value=0.0023 Score=51.22 Aligned_cols=26 Identities=35% Similarity=0.949 Sum_probs=22.6
Q ss_pred ccCCCCccccccccccCCCCccceeec
Q 020671 184 DYQPDICKDYKETGYCGYGDSCKFMHD 210 (323)
Q Consensus 184 DyqPDiCKdYkeTG~CgfGDsCkFlHd 210 (323)
.+..-+|+.|. +|.|.+||.|.|+|+
T Consensus 10 ~~k~~lC~~f~-~G~C~~G~~C~f~H~ 35 (98)
T 2cqe_A 10 PKKRELCKFYI-TGFCARAENCPYMHG 35 (98)
T ss_dssp SCCCSBCTTTT-TTCCSCSTTCSSBSS
T ss_pred CCCCccCcccc-cCcCCCCCCCCCCCC
Confidence 45667999885 799999999999997
No 77
>2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.68 E-value=0.0029 Score=48.22 Aligned_cols=28 Identities=32% Similarity=0.827 Sum_probs=23.9
Q ss_pred cCCCCccccccccccCCCCccceeecccc
Q 020671 185 YQPDICKDYKETGYCGYGDSCKFMHDRGD 213 (323)
Q Consensus 185 yqPDiCKdYkeTG~CgfGDsCkFlHdR~d 213 (323)
+.--||++|.. |.|.+||.|.|+|+...
T Consensus 8 ~k~~~C~~fl~-G~C~~G~~C~fsH~~~~ 35 (77)
T 2d9n_A 8 EKTVVCKHWLR-GLCKKGDQCEFLHEYDM 35 (77)
T ss_dssp CTTSBCHHHHT-TCCSCTTSSSSBCSCCT
T ss_pred CcceeCHhHcc-CcCCCCCCCCCcccccc
Confidence 34568998888 99999999999999873
No 78
>2rhk_C Cleavage and polyadenylation specificity factor subunit 4; influenza A, nonstructural protein, viral protein: HOST complex, Zn finger; 1.95A {Homo sapiens}
Probab=95.56 E-value=0.0032 Score=47.68 Aligned_cols=27 Identities=33% Similarity=0.894 Sum_probs=23.5
Q ss_pred cCCCCccccccccccCCCCccceeeccc
Q 020671 185 YQPDICKDYKETGYCGYGDSCKFMHDRG 212 (323)
Q Consensus 185 yqPDiCKdYkeTG~CgfGDsCkFlHdR~ 212 (323)
...-||++|.. |.|..||+|.|+|+..
T Consensus 14 ~k~~vCk~fl~-G~C~~G~~C~fsH~~~ 40 (72)
T 2rhk_C 14 EKTVVCKHWLR-GLCKKGDQCEFLHEYD 40 (72)
T ss_dssp CCCSBCHHHHT-TCCCCGGGSSSBCSCC
T ss_pred CcCeeCHHHhc-CCCCCCCCCCCccccc
Confidence 44668998888 9999999999999976
No 79
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=95.13 E-value=0.0092 Score=46.62 Aligned_cols=31 Identities=26% Similarity=0.699 Sum_probs=26.4
Q ss_pred ccccccccC-CCCcEE--ccCCCcccHHHHHH-hc
Q 020671 260 FACFICRKP-FVDPVV--TKCKHYFCEHCALK-HH 290 (323)
Q Consensus 260 ~~C~IC~e~-~~~PVv--t~CGH~FC~~Ci~~-~~ 290 (323)
+.|+||.+. +..|+. +.|+|+||..|+.. |.
T Consensus 4 ~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~~h~ 38 (101)
T 2jun_A 4 VLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHP 38 (101)
T ss_dssp CBCTTCCSSSCCBCCEEETTTTEEECHHHHHHHSC
T ss_pred CCCcCCCCCCCCCceEECCcCChHHhHHHCHHHhc
Confidence 579999976 577777 89999999999998 54
No 80
>3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A
Probab=94.81 E-value=0.0072 Score=45.26 Aligned_cols=24 Identities=33% Similarity=1.149 Sum_probs=21.3
Q ss_pred CCccccccccccCCCCc-cceeeccc
Q 020671 188 DICKDYKETGYCGYGDS-CKFMHDRG 212 (323)
Q Consensus 188 DiCKdYkeTG~CgfGDs-CkFlHdR~ 212 (323)
.||++| ..|.|..||+ |+|+|+..
T Consensus 7 ~vC~~f-~~G~C~rg~~~C~f~H~~~ 31 (70)
T 3d2q_A 7 EVCREY-QRGNCNRGENDCRFAHPAD 31 (70)
T ss_dssp EBCHHH-HTTCCSSCTTTCSSBCCCT
T ss_pred hhCHHH-hcCCCCCCCCCCCCccCcc
Confidence 589999 5699999996 99999876
No 81
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=93.86 E-value=0.036 Score=44.45 Aligned_cols=44 Identities=27% Similarity=0.517 Sum_probs=36.2
Q ss_pred CCccccccccCCCCcEEccCCCcccHHHHHHhccCCCCCCCCCCC
Q 020671 258 LPFACFICRKPFVDPVVTKCKHYFCEHCALKHHSKNKKCFVCNEP 302 (323)
Q Consensus 258 ~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~ 302 (323)
-++-|..|....+ ..+.-..||+|..|+.-.+..+..||+|..+
T Consensus 27 G~~nCKsCWf~~k-~LV~C~dHYLCl~CLtlmL~~SdrCpIC~~p 70 (99)
T 2ko5_A 27 GPQFCKSCWFENK-GLVECNNHYLCLNCLTLLLSVSNRCPICKMP 70 (99)
T ss_dssp CCCCCCSSCSCCS-SEEECSSCEEEHHHHHHTCSSSSEETTTTEE
T ss_pred CcccChhhccccC-CeeeecchhhHHHHHHHHHhhccCCcccCCc
Confidence 3678999987666 3444557999999999999999999999885
No 82
>2fc6_A Nuclear, target of EGR1, member 1; structure genomics, ZF-CCCH domain, member 1(nuclear), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.66.1.1
Probab=93.50 E-value=0.02 Score=40.69 Aligned_cols=27 Identities=30% Similarity=0.796 Sum_probs=24.4
Q ss_pred CCCccccccccccCCCCccceeecccc
Q 020671 187 PDICKDYKETGYCGYGDSCKFMHDRGD 213 (323)
Q Consensus 187 PDiCKdYkeTG~CgfGDsCkFlHdR~d 213 (323)
=-||+.|..-|||.+|..|.|.||-.-
T Consensus 20 ~~iC~~FSayGwCp~G~~Cp~SHDiDl 46 (50)
T 2fc6_A 20 TSICDNFSAYGWCPLGPQCPQSHDISG 46 (50)
T ss_dssp SCBCSHHHHTCCCTTGGGCSSBCCCCC
T ss_pred cchhhhccccccCCCCCCCCccccCCC
Confidence 468999999999999999999999763
No 83
>2rpp_A Muscleblind-like protein 2; zinc finger domain, C3H, alternative splicing, cytoplasm, metal-binding, nucleus, RNA-binding, zinc, zinc-finger; NMR {Homo sapiens}
Probab=93.40 E-value=0.043 Score=43.29 Aligned_cols=39 Identities=33% Similarity=0.875 Sum_probs=30.7
Q ss_pred CCCCCcccCceeecceeeccCCCCccccccccccCCCC-ccceeecccc
Q 020671 166 GSHGPLRASAHIRVTARFDYQPDICKDYKETGYCGYGD-SCKFMHDRGD 213 (323)
Q Consensus 166 ~~~gP~ra~~nir~t~~~DyqPDiCKdYkeTG~CgfGD-sCkFlHdR~d 213 (323)
|-..|+|-+..++ -.||+||.. |.|-.|| .|+|+|....
T Consensus 4 ~~~~~~~~~~~~~--------~~VCrdFlr-G~C~r~d~~CrfsH~~~~ 43 (89)
T 2rpp_A 4 GSSGPVRDTKWLT--------LEVCRQFQR-GTCSRSDEECKFAHPPKS 43 (89)
T ss_dssp CCCSCCCSCSSSE--------ECBCHHHHH-TCCCCCTTTSSSBCCCSS
T ss_pred cccccccCCCcch--------hhhchHHhc-CCCCCCCCCCCCcCCCcc
Confidence 4456666655555 457999998 9999998 9999999884
No 84
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=93.06 E-value=0.085 Score=48.23 Aligned_cols=43 Identities=21% Similarity=0.448 Sum_probs=35.5
Q ss_pred ccccccccCCCCcEEc-cCCCcccHHHHHHhccC--CCCCCCCCCC
Q 020671 260 FACFICRKPFVDPVVT-KCKHYFCEHCALKHHSK--NKKCFVCNEP 302 (323)
Q Consensus 260 ~~C~IC~e~~~~PVvt-~CGH~FC~~Ci~~~~~~--s~~CP~Cr~~ 302 (323)
..|.||.+.+...+.= .|+|.|-..|+..|++. ...||.|+.+
T Consensus 181 ~~C~iC~~iv~~g~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~~ 226 (238)
T 3nw0_A 181 KICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDY 226 (238)
T ss_dssp CBCTTTCSBCSSCEECSSSCCEECHHHHHHHTTTCSSCBCTTTCCB
T ss_pred CcCcchhhHHhCCcccCccChHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 3699999998765533 49999999999999874 4699999885
No 85
>3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens}
Probab=92.61 E-value=0.046 Score=42.48 Aligned_cols=26 Identities=31% Similarity=0.910 Sum_probs=23.3
Q ss_pred CCCccccccccccCCCC-ccceeecccc
Q 020671 187 PDICKDYKETGYCGYGD-SCKFMHDRGD 213 (323)
Q Consensus 187 PDiCKdYkeTG~CgfGD-sCkFlHdR~d 213 (323)
-.||+||.. |.|..|| .|+|+|....
T Consensus 9 ~~VCr~Flr-G~C~r~d~~C~f~H~~~~ 35 (83)
T 3d2n_A 9 LEVCREFQR-GTCSRPDTECKFAHPSKS 35 (83)
T ss_dssp EEBCTTGGG-TCCCSCTTTCSSBCCCTT
T ss_pred chhcHHHhc-CCCCCCCCCCCCcCCCcc
Confidence 568999998 9999998 9999999873
No 86
>2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.46 E-value=0.051 Score=41.24 Aligned_cols=23 Identities=30% Similarity=0.681 Sum_probs=21.2
Q ss_pred CccccccccccCCCCccceeeccc
Q 020671 189 ICKDYKETGYCGYGDSCKFMHDRG 212 (323)
Q Consensus 189 iCKdYkeTG~CgfGDsCkFlHdR~ 212 (323)
+|++|..+|.|. |+.|.|+|..-
T Consensus 40 ~C~~f~~~G~C~-~~~C~f~H~~~ 62 (77)
T 2d9n_A 40 ECYFYSKFGECS-NKECPFLHIDP 62 (77)
T ss_dssp BCHHHHHTCCCC-CSSCSSBCCCT
T ss_pred CCcccCCCCccC-CCCeeccCCCc
Confidence 799998889999 99999999875
No 87
>2e5s_A Otthump00000018578; ZF-CCCHX2 domain, muscleblind-like 2, isoform 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.94 E-value=0.033 Score=44.51 Aligned_cols=25 Identities=28% Similarity=1.075 Sum_probs=22.4
Q ss_pred CCccccccccccCCCC-ccceeecccc
Q 020671 188 DICKDYKETGYCGYGD-SCKFMHDRGD 213 (323)
Q Consensus 188 DiCKdYkeTG~CgfGD-sCkFlHdR~d 213 (323)
.||++|.. |.|..|| .|+|+|+...
T Consensus 21 ~VCr~Flr-G~C~rgd~~C~FsH~~~~ 46 (98)
T 2e5s_A 21 EVCREFQR-GNCARGETDCRFAHPADS 46 (98)
T ss_dssp EBCSHHHH-TCCSSHHHHCSSBCCSSC
T ss_pred hhhHHHhc-CcCCCCCCCCCCcCCchh
Confidence 47999998 9999999 6999999874
No 88
>3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A
Probab=89.62 E-value=0.092 Score=39.11 Aligned_cols=24 Identities=33% Similarity=0.881 Sum_probs=20.8
Q ss_pred CCCccccccccccCCCCccceeeccc
Q 020671 187 PDICKDYKETGYCGYGDSCKFMHDRG 212 (323)
Q Consensus 187 PDiCKdYkeTG~CgfGDsCkFlHdR~ 212 (323)
--+|+||.. |.|..| +|+|+|...
T Consensus 42 ~~vC~~flk-G~C~r~-~C~y~H~~~ 65 (70)
T 3d2q_A 42 VTVCMDYIK-GRCSRE-KCKYFHPPA 65 (70)
T ss_dssp EEBCHHHHT-TCCCCT-TCCSBCCCH
T ss_pred ceeccccCc-CCCCCC-CcCeeCCHH
Confidence 357999988 999999 999999865
No 89
>2rhk_C Cleavage and polyadenylation specificity factor subunit 4; influenza A, nonstructural protein, viral protein: HOST complex, Zn finger; 1.95A {Homo sapiens}
Probab=87.56 E-value=0.13 Score=38.69 Aligned_cols=23 Identities=30% Similarity=0.655 Sum_probs=21.1
Q ss_pred CccccccccccCCCCccceeeccc
Q 020671 189 ICKDYKETGYCGYGDSCKFMHDRG 212 (323)
Q Consensus 189 iCKdYkeTG~CgfGDsCkFlHdR~ 212 (323)
+|++|...|.|.+ +.|.|+|..-
T Consensus 46 ~C~~f~~~G~C~~-~~C~y~H~~p 68 (72)
T 2rhk_C 46 ECYFYSKFGECSN-KECPFLHIDP 68 (72)
T ss_dssp BCHHHHHHSCCSB-TTCCSBCCCC
T ss_pred cccccCCCCCCCC-CCeeccCCCc
Confidence 7999988899999 9999999865
No 90
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=87.25 E-value=0.63 Score=36.36 Aligned_cols=51 Identities=25% Similarity=0.560 Sum_probs=38.0
Q ss_pred CCCCccccccccCCCCcEEccC----CCcccHHHHHHhcc-----------CCCCCCCCCCCCCCc
Q 020671 256 DSLPFACFICRKPFVDPVVTKC----KHYFCEHCALKHHS-----------KNKKCFVCNEPTLGI 306 (323)
Q Consensus 256 e~~p~~C~IC~e~~~~PVvt~C----GH~FC~~Ci~~~~~-----------~s~~CP~Cr~~t~gv 306 (323)
..-++.|.+|.+.+.+.-...| .|.||..|.+..++ ...+||+-+....--
T Consensus 12 ~~a~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~sIk~q~~~~EvyCPSG~kCpL~gS~~PWA 77 (93)
T 2cs3_A 12 NSGPLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRESIKAQGATGEVYCPSGEKCPLVGSNVPWA 77 (93)
T ss_dssp SCCSCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHHHHHHHHSSSCCCCTTSSCCBCSSSSSBCC
T ss_pred CCCeeEeecchhhhccCceeeCCCccCCeeeccccHHHHHhcCCCCcEECCCCCccccCCCcCchH
Confidence 4567899999999987755555 58899999998876 236777776654433
No 91
>2e5s_A Otthump00000018578; ZF-CCCHX2 domain, muscleblind-like 2, isoform 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.90 E-value=0.17 Score=40.31 Aligned_cols=23 Identities=35% Similarity=0.889 Sum_probs=20.3
Q ss_pred CCccccccccccCCCCccceeeccc
Q 020671 188 DICKDYKETGYCGYGDSCKFMHDRG 212 (323)
Q Consensus 188 DiCKdYkeTG~CgfGDsCkFlHdR~ 212 (323)
-+|.||.. |.|.+| .|+|+|...
T Consensus 57 ~vC~~flk-G~C~r~-~C~y~H~~~ 79 (98)
T 2e5s_A 57 TVCMDYIK-GRCMRE-KCKYFHPPA 79 (98)
T ss_dssp EBCHHHHH-TCCCCT-TCCSBCCCH
T ss_pred ccchhhcc-CCCCCC-CcCccCChH
Confidence 37988877 999999 999999876
No 92
>3u9g_A Zinc finger CCCH-type antiviral protein 1; zinc finger protein; 1.80A {Rattus norvegicus}
Probab=85.59 E-value=0.22 Score=45.59 Aligned_cols=25 Identities=40% Similarity=0.870 Sum_probs=20.9
Q ss_pred CCCcccccc---ccccCCCCccceeecc
Q 020671 187 PDICKDYKE---TGYCGYGDSCKFMHDR 211 (323)
Q Consensus 187 PDiCKdYke---TG~CgfGDsCkFlHdR 211 (323)
|+||+.|+- -|.|.|++.|..||.=
T Consensus 151 PeiC~~YkG~g~~g~C~~~~~C~kLHIC 178 (229)
T 3u9g_A 151 PEICKSYKGEGRKQTCGQPQPCERLHIC 178 (229)
T ss_dssp CCBCTTCCCSSSCCSCSSSSCCCSBCSC
T ss_pred chHHHHhCCCCCCCcCCCCCCCcceecc
Confidence 999999953 2699999999999963
No 93
>3u1l_A PRE-mRNA-splicing factor CWC2; CSMP, zinc finger; 1.64A {Saccharomyces cerevisiae} PDB: 3u1m_A 3tp2_A
Probab=84.33 E-value=0.24 Score=45.35 Aligned_cols=26 Identities=27% Similarity=0.674 Sum_probs=21.7
Q ss_pred CCCCccccccccccCCCCccceeeccc
Q 020671 186 QPDICKDYKETGYCGYGDSCKFMHDRG 212 (323)
Q Consensus 186 qPDiCKdYkeTG~CgfGDsCkFlHdR~ 212 (323)
.|=||-.|.. |+|.+|+.|.|+|..-
T Consensus 69 ~~~~C~ffak-G~C~~G~~C~y~H~lP 94 (240)
T 3u1l_A 69 QLFFCLFFAK-GMCCLGPKCEYLHHIP 94 (240)
T ss_dssp CCSBCHHHHT-TCCSCGGGCSSBBSCC
T ss_pred CCeEcCcccc-CCCCCCCCCCccCCCC
Confidence 3779977765 9999999999999643
No 94
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=84.19 E-value=1.6 Score=37.05 Aligned_cols=61 Identities=18% Similarity=0.480 Sum_probs=37.3
Q ss_pred ccccccccCCCCcEEccCCCcccHHHHHHhc-----------cCCCCCCCCCC-CCCCchhhHHHHHHHHHHh
Q 020671 260 FACFICRKPFVDPVVTKCKHYFCEHCALKHH-----------SKNKKCFVCNE-PTLGIFNTALEIRKRMAEE 320 (323)
Q Consensus 260 ~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~-----------~~s~~CP~Cr~-~t~gvfn~Ak~L~~kLk~~ 320 (323)
..|.+|.+-=.=-.--.|-..||..|+...+ .....||.|.. +..++.+....+.+.|++.
T Consensus 64 d~C~vC~~GG~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~pl~~l~~~c~~~~~~~~~~ 136 (142)
T 2lbm_A 64 EQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVTACNSVFENLEQL 136 (142)
T ss_dssp CSCSSSCCCSSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCCTTHHHHHHHHHHHHHHHHH
T ss_pred CeecccCCCCcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCccHHHHHHHHHHHHHHHHHH
Confidence 3699998753200112677789999999544 25688999974 3334444444455555443
No 95
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=78.00 E-value=1.2 Score=43.40 Aligned_cols=48 Identities=23% Similarity=0.395 Sum_probs=36.7
Q ss_pred CCCCccccccccCCCCcEEc-cCCCc--ccHHHHHHhcc--CCCCCCCCCCCC
Q 020671 256 DSLPFACFICRKPFVDPVVT-KCKHY--FCEHCALKHHS--KNKKCFVCNEPT 303 (323)
Q Consensus 256 e~~p~~C~IC~e~~~~PVvt-~CGH~--FC~~Ci~~~~~--~s~~CP~Cr~~t 303 (323)
..+.+.|||-...+..|+.. .|.|. |-..-++.... ....||+|.+..
T Consensus 246 ~~vSL~CPlS~~ri~~PvRg~~C~HlQCFDl~sfL~~~~~~~~W~CPIC~k~~ 298 (371)
T 3i2d_A 246 TIMSLQCPISYTRMKYPSKSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDI 298 (371)
T ss_dssp EEEESBCTTTSSBCSSEEEETTCCSSCCEEHHHHHHHHHHSCCCBCTTTCCBC
T ss_pred eEEeecCCCccccccccCcCCcCCCcceECHHHHHHHhhcCCceeCCCCCccc
Confidence 46778999999999999965 79998 44444554432 679999998864
No 96
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=77.80 E-value=2.6 Score=45.82 Aligned_cols=48 Identities=13% Similarity=-0.007 Sum_probs=42.1
Q ss_pred CCCCccccccccCCCCcEEccCC-CcccHHHHHHhccCCCCCCCCCCCC
Q 020671 256 DSLPFACFICRKPFVDPVVTKCK-HYFCEHCALKHHSKNKKCFVCNEPT 303 (323)
Q Consensus 256 e~~p~~C~IC~e~~~~PVvt~CG-H~FC~~Ci~~~~~~s~~CP~Cr~~t 303 (323)
--..|.|||-.+...+||+++.| ++|=..+|.+|+.....||+=+.+.
T Consensus 888 iP~~F~cPIs~~lM~DPVilpsG~~TydR~~I~~wl~~~~tdP~Tr~~L 936 (968)
T 3m62_A 888 VPDEFLDPLMYTIMKDPVILPASKMNIDRSTIKAHLLSDSTDPFNRMPL 936 (968)
T ss_dssp SCGGGBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBC
T ss_pred CcHHhCCcchhhHHhCCeEcCCCCEEECHHHHHHHHhcCCCCCCCCCCC
Confidence 34468999999999999999998 5899999999998888999888764
No 97
>3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens}
Probab=74.63 E-value=0.88 Score=35.15 Aligned_cols=23 Identities=30% Similarity=0.665 Sum_probs=19.9
Q ss_pred CCccccccccccCCCCccceeeccc
Q 020671 188 DICKDYKETGYCGYGDSCKFMHDRG 212 (323)
Q Consensus 188 DiCKdYkeTG~CgfGDsCkFlHdR~ 212 (323)
-+|.||.. |.|..+ .|+|+|...
T Consensus 44 ~vC~dflk-G~C~r~-~C~y~H~~~ 66 (83)
T 3d2n_A 44 IACFDSLK-GRCSRE-NCKYLHPPP 66 (83)
T ss_dssp ECCHHHHT-TCCCCS-SCSSCCCCH
T ss_pred eehhHhhh-ccccCC-CcceeCChH
Confidence 47888866 899999 999999876
No 98
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=73.25 E-value=2.2 Score=34.12 Aligned_cols=46 Identities=15% Similarity=0.224 Sum_probs=35.9
Q ss_pred ccccccccCCCC---cEEccCCCcccHHHHHHhccCCCCCCCCCCCCCC
Q 020671 260 FACFICRKPFVD---PVVTKCKHYFCEHCALKHHSKNKKCFVCNEPTLG 305 (323)
Q Consensus 260 ~~C~IC~e~~~~---PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~g 305 (323)
|.|..|...|.+ .....=|..||..|..+.+.....|..|..++.+
T Consensus 33 F~C~~C~~~L~~~~~~~~~~~g~~yC~~cy~~~f~~~~~C~~C~~~I~~ 81 (122)
T 1m3v_A 33 LKCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFGNSGAGGSGGHMGSG 81 (122)
T ss_dssp HCCSSSCCCTTTSEECCEEETTEEECHHHHHHHHCCCCSSSCSSCCSCC
T ss_pred CCcCCCCCcccccCCeEEEECCeeecHHHHHHHcCCCCccccCCCCcCc
Confidence 688899998852 3455667889999999888655589999987653
No 99
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=72.09 E-value=2.1 Score=41.61 Aligned_cols=49 Identities=18% Similarity=0.371 Sum_probs=37.4
Q ss_pred CCCCccccccccCCCCcEEc-cCCCc--ccHHHHHHhcc--CCCCCCCCCCCCC
Q 020671 256 DSLPFACFICRKPFVDPVVT-KCKHY--FCEHCALKHHS--KNKKCFVCNEPTL 304 (323)
Q Consensus 256 e~~p~~C~IC~e~~~~PVvt-~CGH~--FC~~Ci~~~~~--~s~~CP~Cr~~t~ 304 (323)
..+.+.|||-...+..|+.. .|.|. |-..-++.... ....||+|.+...
T Consensus 212 ~~vSL~CPlS~~ri~~P~Rg~~C~HlqCFDl~sfL~~~~~~~~W~CPiC~k~~~ 265 (360)
T 4fo9_A 212 LRVSLMCPLGKMRLTIPCRAVTCTHLQCFDAALYLQMNEKKPTWICPVCDKKAA 265 (360)
T ss_dssp EEEESBCTTTCSBCSSEEEETTCCCCCCEEHHHHHHHHHHSCCCBCTTTCSBCC
T ss_pred eEEeeeCCCccceeccCCcCCCCCCCccCCHHHHHHHHhhCCCeECCCCCcccC
Confidence 45678999999999999865 79998 54554554443 6799999998653
No 100
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=70.93 E-value=3 Score=30.34 Aligned_cols=39 Identities=26% Similarity=0.691 Sum_probs=31.0
Q ss_pred cccccccCCCCcE---EccCCCcccHHHHHHhccCCCCCCCC
Q 020671 261 ACFICRKPFVDPV---VTKCKHYFCEHCALKHHSKNKKCFVC 299 (323)
Q Consensus 261 ~C~IC~e~~~~PV---vt~CGH~FC~~Ci~~~~~~s~~CP~C 299 (323)
.|..|...|.... -..|++.||..|=.=....-..||-|
T Consensus 17 ~C~~C~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~CPgC 58 (59)
T 1z60_A 17 FCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLHSCPGC 58 (59)
T ss_dssp EETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSCSSSTT
T ss_pred cccccCcccCCCccEECCccCcCcccchhHHHHhhccCCcCC
Confidence 4999999986654 35789999999977555567889988
No 101
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=65.13 E-value=3.6 Score=32.88 Aligned_cols=47 Identities=15% Similarity=0.332 Sum_probs=35.5
Q ss_pred CccccccccCCC---CcEEccCCCcccHHHHHHhccCCCCCCCCCCCCCC
Q 020671 259 PFACFICRKPFV---DPVVTKCKHYFCEHCALKHHSKNKKCFVCNEPTLG 305 (323)
Q Consensus 259 p~~C~IC~e~~~---~PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~g 305 (323)
-|.|..|...|. .+....=|..||..|..+.+.....|..|+.++.+
T Consensus 29 CF~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~~~~~~~~~C~~C~~~I~~ 78 (131)
T 2xjy_A 29 CLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFGQDGLCASCDKRIRA 78 (131)
T ss_dssp TCBCTTTCCBCSSTTCCEEEETTEEECHHHHHHHHCCCEECTTTCCEECT
T ss_pred HcccCcCCCccccCCCeEEEECCEEeecCchhhhCCCccChhhcCCccCc
Confidence 468888988884 34556668889999999877644489999887654
No 102
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=63.28 E-value=5.9 Score=31.39 Aligned_cols=44 Identities=25% Similarity=0.542 Sum_probs=34.5
Q ss_pred CccccccccCCCC-cEEccCCCcccHHHHHHhccCCCCCCCCCCCCC
Q 020671 259 PFACFICRKPFVD-PVVTKCKHYFCEHCALKHHSKNKKCFVCNEPTL 304 (323)
Q Consensus 259 p~~C~IC~e~~~~-PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~ 304 (323)
-|.|..|...+.. +....=|..||..|..+.+. ..|..|+.++.
T Consensus 30 CF~C~~C~~~L~~~~f~~~~g~~yC~~cy~~~~~--~~C~~C~~~I~ 74 (126)
T 2xqn_T 30 HFCCFDCDSILAGEIYVMVNDKPVCKPCYVKNHA--VVCQGCHNAID 74 (126)
T ss_dssp GSBCTTTCCBCTTSEEEEETTEEEEHHHHHHHSC--CBCTTTCSBCC
T ss_pred CCCcCCCCCCCCcCEEEeECCEEechHHhCcCcC--ccCcccCCcCC
Confidence 4788899998865 34556688899999987654 68999998876
No 103
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=60.53 E-value=7.3 Score=28.10 Aligned_cols=47 Identities=17% Similarity=0.269 Sum_probs=34.3
Q ss_pred CccccccccCCCC-cEEccCCCcccH-HHHHHhccCCCCCCCCCCCCCCch
Q 020671 259 PFACFICRKPFVD-PVVTKCKHYFCE-HCALKHHSKNKKCFVCNEPTLGIF 307 (323)
Q Consensus 259 p~~C~IC~e~~~~-PVvt~CGH~FC~-~Ci~~~~~~s~~CP~Cr~~t~gvf 307 (323)
=|.|..|...+.. +....=+..||. .|..+.+. ..|..|+.....+|
T Consensus 27 CF~C~~C~~~L~~~~~~~~~g~~yC~~~cy~~~f~--~~C~~C~~~~~~~~ 75 (76)
T 1iml_A 27 CLKCEKCGKTLTSGGHAEHEGKPYCNHPCYSAMFG--PKGFGRGGAESHTF 75 (76)
T ss_dssp TCBCTTTCCBCCTTTEEEETTEEEETTTHHHHHSS--CCCSSCCCSSSCCC
T ss_pred CCCccccCccCCCCceECcCCeEeeCHHHHHHHhC--ccCCCcCCceeeee
Confidence 4788999988865 445556788999 69987664 68999986654443
No 104
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=59.88 E-value=7.3 Score=33.12 Aligned_cols=44 Identities=18% Similarity=0.484 Sum_probs=31.9
Q ss_pred CccccccccCCCCcEEccCCCcccHHHHHHhccCCCCCCCCCCCCC
Q 020671 259 PFACFICRKPFVDPVVTKCKHYFCEHCALKHHSKNKKCFVCNEPTL 304 (323)
Q Consensus 259 p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~ 304 (323)
-|.|..|...|.......=|..||..|..+.+. ..|..|+.++.
T Consensus 87 CF~C~~C~~~L~~~~f~~~g~~yC~~~y~~~f~--~kC~~C~~~I~ 130 (182)
T 2jtn_A 87 CLKCSDCHVPLAERCFSRGESVYCKDDFFKRFG--TKCAACQLGIP 130 (182)
T ss_dssp TTSCTTTCCCCSSCCEEETTEEECHHHHHHTTS--CCCTTTCCCCC
T ss_pred cCccCCCCCccCCCceeECCEeeecCccccccc--cccccCCCccC
Confidence 468888988886443445577899999887654 67888877654
No 105
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=59.52 E-value=5.2 Score=29.90 Aligned_cols=35 Identities=26% Similarity=0.670 Sum_probs=24.5
Q ss_pred CCCCCccccccccCCCCcEEccC-CCcccHHHHHHhcc
Q 020671 255 EDSLPFACFICRKPFVDPVVTKC-KHYFCEHCALKHHS 291 (323)
Q Consensus 255 ee~~p~~C~IC~e~~~~PVvt~C-GH~FC~~Ci~~~~~ 291 (323)
++++| =|.||.+... -.-+.| +-.||..|+.+...
T Consensus 5 ~ee~p-WC~ICneDAt-lrC~gCdgDLYC~rC~rE~H~ 40 (67)
T 2d8v_A 5 SSGLP-WCCICNEDAT-LRCAGCDGDLYCARCFREGHD 40 (67)
T ss_dssp CCCCS-SCTTTCSCCC-EEETTTTSEEECSSHHHHHTT
T ss_pred CcCCC-eeEEeCCCCe-EEecCCCCceehHHHHHHHcc
Confidence 44455 4889999833 224567 67899999998763
No 106
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=59.04 E-value=7.9 Score=32.49 Aligned_cols=44 Identities=18% Similarity=0.484 Sum_probs=31.9
Q ss_pred CccccccccCCCCcEEccCCCcccHHHHHHhccCCCCCCCCCCCCC
Q 020671 259 PFACFICRKPFVDPVVTKCKHYFCEHCALKHHSKNKKCFVCNEPTL 304 (323)
Q Consensus 259 p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~ 304 (323)
=|.|..|...|.......=|..||..|..+.+. ..|..|+.++.
T Consensus 33 CF~C~~C~~~L~~~~f~~~g~~yC~~~y~~~f~--~~C~~C~~~I~ 76 (169)
T 2rgt_A 33 CLKCSDCHVPLAERCFSRGESVYCKDDFFKRFG--TKCAACQLGIP 76 (169)
T ss_dssp TSBCTTTCCBCCSCCEESSSCEECHHHHHHHHS--CBCTTTCCBCC
T ss_pred cCccCCCCCcCCCCCcccCCeeeeccccccccc--ccccccccccC
Confidence 468888988886543455578899999987664 57777777654
No 107
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=58.92 E-value=9 Score=37.46 Aligned_cols=45 Identities=20% Similarity=0.470 Sum_probs=31.9
Q ss_pred CCccccccccCCCCcEE--ccCCCcccHHHHHHhcc----------CCCCCCCCCCC
Q 020671 258 LPFACFICRKPFVDPVV--TKCKHYFCEHCALKHHS----------KNKKCFVCNEP 302 (323)
Q Consensus 258 ~p~~C~IC~e~~~~PVv--t~CGH~FC~~Ci~~~~~----------~s~~CP~Cr~~ 302 (323)
....|.+|-+--.=-.- ..|...||..||...+. ....|.+|.-.
T Consensus 92 ~~~yCr~C~~Gg~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~ 148 (386)
T 2pv0_B 92 YQSYCSICCSGETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPS 148 (386)
T ss_dssp SBCSCTTTCCCSSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSC
T ss_pred CcccceEcCCCCeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCc
Confidence 34479999875321111 26888999999999884 46899999754
No 108
>2rpp_A Muscleblind-like protein 2; zinc finger domain, C3H, alternative splicing, cytoplasm, metal-binding, nucleus, RNA-binding, zinc, zinc-finger; NMR {Homo sapiens}
Probab=58.41 E-value=2.8 Score=32.78 Aligned_cols=23 Identities=30% Similarity=0.673 Sum_probs=19.0
Q ss_pred CCccccccccccCCCCccceeeccc
Q 020671 188 DICKDYKETGYCGYGDSCKFMHDRG 212 (323)
Q Consensus 188 DiCKdYkeTG~CgfGDsCkFlHdR~ 212 (323)
-+|.||.. |.|..+ +|+|+|..-
T Consensus 52 ~vC~dflk-G~C~r~-~Cky~H~~~ 74 (89)
T 2rpp_A 52 IACFDSLK-GRCSRE-NCKYLHPPT 74 (89)
T ss_dssp EBCHHHHH-TCCCCT-TCCSBCCCH
T ss_pred eeehhhhh-CcCCCC-CcceecCHH
Confidence 46878865 899998 999999865
No 109
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=57.94 E-value=6 Score=25.84 Aligned_cols=47 Identities=23% Similarity=0.323 Sum_probs=26.6
Q ss_pred CccccccccCCCCcEEccCCCcccHHHHHHhc-cCCCCCCCCCCCCCCchhhHHH
Q 020671 259 PFACFICRKPFVDPVVTKCKHYFCEHCALKHH-SKNKKCFVCNEPTLGIFNTALE 312 (323)
Q Consensus 259 p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~-~~s~~CP~Cr~~t~gvfn~Ak~ 312 (323)
|+.|.+|...|..+..+. .| +..+. .....|+.|+..+....++..+
T Consensus 1 p~~C~~C~~~f~~~~~l~-~H------~~~h~~~~~~~C~~C~~~f~~~~~l~~H 48 (57)
T 1bbo_A 1 KYICEECGIRXKKPSMLK-KH------IRTHTDVRPYHCTYCNFSFKTKGNLTKH 48 (57)
T ss_dssp CCBCTTTCCBCSSHHHHH-HH------HHHTSSCCCEECSSSSCEESSHHHHHHH
T ss_pred CCcCCCCcCcCCCHHHHH-HH------HHhcCCCCCccCCCCCchhcCHHHHHHH
Confidence 578999998887653221 11 00111 1346799998876554444444
No 110
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=57.16 E-value=3.3 Score=29.22 Aligned_cols=49 Identities=20% Similarity=0.372 Sum_probs=29.6
Q ss_pred CCCccccccccCCCCcEEccCCCcccHHHHHHh-ccCCCCCCCCCCCCCCchhhHHH
Q 020671 257 SLPFACFICRKPFVDPVVTKCKHYFCEHCALKH-HSKNKKCFVCNEPTLGIFNTALE 312 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~-~~~s~~CP~Cr~~t~gvfn~Ak~ 312 (323)
+-||.|.+|...|.....+. .| ...+ -.....|+.|++.+....++..+
T Consensus 2 EKpy~C~~C~k~F~~~~~L~-~H------~~~Ht~ekp~~C~~C~k~F~~~~~L~~H 51 (60)
T 4gzn_C 2 ERPFFCNFCGKTYRDASGLS-RH------RRAHLGYRPRSCPECGKCFRDQSEVNRH 51 (60)
T ss_dssp CCCEECTTTCCEESSHHHHH-HH------HHHHHTCCCEECTTTCCEESSHHHHHHH
T ss_pred CCCccCCCCCCEeCCHHHHH-HH------HHHhCCCcCeECCCCCCCcCCHHHHHHH
Confidence 35899999999887653221 11 0011 11567899998886655555544
No 111
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding protein 1; B-tandem zipper, protein binding; 1.30A {Mus musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 2dfy_X 2xjz_I 2xjy_B
Probab=56.68 E-value=2.9 Score=35.96 Aligned_cols=47 Identities=17% Similarity=0.401 Sum_probs=34.5
Q ss_pred CccccccccCCCC---cEEccCCCcccHHHHHHhccCCCCCCCCCCCCCC
Q 020671 259 PFACFICRKPFVD---PVVTKCKHYFCEHCALKHHSKNKKCFVCNEPTLG 305 (323)
Q Consensus 259 p~~C~IC~e~~~~---PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~g 305 (323)
-|.|..|...|.. +....=|..||..|..+.+.....|..|..++.+
T Consensus 32 CF~C~~C~~~L~~~g~~~~~~~g~~yC~~cy~~~~~~~~~C~~C~~~I~~ 81 (188)
T 1rut_X 32 CLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFGNSGACSACGQSIPA 81 (188)
T ss_dssp GCBCTTTCCBHHHHCSEEEEETTEEECHHHHHHHHSCCEECTTTCCEECT
T ss_pred CcccCCCCcccccCCceEEEeCCccccccccccccccCCccccCCCcccc
Confidence 3678888888763 4555667889999998877533379999887653
No 112
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=55.87 E-value=8.6 Score=25.03 Aligned_cols=49 Identities=20% Similarity=0.258 Sum_probs=27.4
Q ss_pred CCccccccccCCCCcEEccCCCcccHHHHHHh-ccCCCCCCCCCCCCCCchhhHHHH
Q 020671 258 LPFACFICRKPFVDPVVTKCKHYFCEHCALKH-HSKNKKCFVCNEPTLGIFNTALEI 313 (323)
Q Consensus 258 ~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~-~~~s~~CP~Cr~~t~gvfn~Ak~L 313 (323)
.|+.|.+|...|.....+. .| +..+ -.....|+.|...+....++..++
T Consensus 3 ~~~~C~~C~~~f~~~~~l~-~H------~~~h~~~~~~~C~~C~~~f~~~~~l~~H~ 52 (57)
T 3uk3_C 3 SSRECSYCGKFFRSNYYLN-IH------LRTHTGEKPYKCEFCEYAAAQKTSLRYHL 52 (57)
T ss_dssp --CBCTTTCCBCSCHHHHH-HH------HHHHHCCCCEECSSSSCEESSHHHHHHHH
T ss_pred CCccCCCCcchhCChHHHH-HH------HHHcCCCCCcCCCCCcchhCCHHHHHHHH
Confidence 4789999999887653221 11 0111 124578999988765554444443
No 113
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=55.13 E-value=1.8 Score=41.02 Aligned_cols=46 Identities=24% Similarity=0.460 Sum_probs=35.5
Q ss_pred CCCccccccccCCCCcEEc----cCC--CcccHHHHHHhccCCCCCCCCCCC
Q 020671 257 SLPFACFICRKPFVDPVVT----KCK--HYFCEHCALKHHSKNKKCFVCNEP 302 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~PVvt----~CG--H~FC~~Ci~~~~~~s~~CP~Cr~~ 302 (323)
+....||+|.....-.++. .=| +.+|..|-..|.-....||.|+..
T Consensus 180 ~~~~~CPvCGs~P~~s~l~~~g~~~G~R~l~Cs~C~t~W~~~R~~C~~Cg~~ 231 (309)
T 2fiy_A 180 ESRTLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHYVRIKCSHCEES 231 (309)
T ss_dssp TTCSSCTTTCCCEEEEEEEC----CCEEEEEETTTCCEEECCTTSCSSSCCC
T ss_pred ccCCCCCCCCCcCceeEEeecCCCCCcEEEEeCCCCCEEeecCcCCcCCCCC
Confidence 4456899999986554443 234 458999999999888999999885
No 114
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=53.98 E-value=13 Score=28.99 Aligned_cols=44 Identities=20% Similarity=0.366 Sum_probs=27.7
Q ss_pred CccccccccCCCCcEEc---cCCCcccHHHHHHhcc---CCCCCCCCCCCC
Q 020671 259 PFACFICRKPFVDPVVT---KCKHYFCEHCALKHHS---KNKKCFVCNEPT 303 (323)
Q Consensus 259 p~~C~IC~e~~~~PVvt---~CGH~FC~~Ci~~~~~---~s~~CP~Cr~~t 303 (323)
...| ||........++ .|...|-..|+..-.. ....||.|+...
T Consensus 28 ~vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~~~ 77 (98)
T 2lv9_A 28 VTRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQPRN 77 (98)
T ss_dssp BCCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCSSBCCTTTSSSC
T ss_pred CEEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCCCEECCCCcCCC
Confidence 3578 898876555454 4555666677643222 457999997543
No 115
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=52.53 E-value=12 Score=25.72 Aligned_cols=51 Identities=20% Similarity=0.236 Sum_probs=30.1
Q ss_pred CCCCccccccccCCCCcEEccCCCcccHHHHHHh-ccCCCCCCCCCCCCCCchhhHHHH
Q 020671 256 DSLPFACFICRKPFVDPVVTKCKHYFCEHCALKH-HSKNKKCFVCNEPTLGIFNTALEI 313 (323)
Q Consensus 256 e~~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~-~~~s~~CP~Cr~~t~gvfn~Ak~L 313 (323)
...+|.|.+|...|.....+. .|. ..+ -.....|+.|...+....++..++
T Consensus 6 ~~~~~~C~~C~k~f~~~~~L~-~H~------~~H~~~~~~~C~~C~~~f~~~~~L~~H~ 57 (70)
T 1x5w_A 6 SGHPEKCSECSYSCSSKAALR-IHE------RIHCTDRPFKCNYCSFDTKQPSNLSKHM 57 (70)
T ss_dssp CCCSEECSSSSCEESSHHHHH-HHH------GGGCCSCSEECSSSSCEESSHHHHHHHH
T ss_pred CCCCeECCCCCcccCCHHHHH-HHH------HHcCCCCCEeCCCCCCccCCHHHHHHHH
Confidence 346899999998876543221 110 000 113468999988766655555554
No 116
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=52.31 E-value=11 Score=32.44 Aligned_cols=42 Identities=24% Similarity=0.551 Sum_probs=30.8
Q ss_pred CCccccccccCCCCcEEc-----cCCCcccHHHHHHhcc----------CCCCCCCCCCC
Q 020671 258 LPFACFICRKPFVDPVVT-----KCKHYFCEHCALKHHS----------KNKKCFVCNEP 302 (323)
Q Consensus 258 ~p~~C~IC~e~~~~PVvt-----~CGH~FC~~Ci~~~~~----------~s~~CP~Cr~~ 302 (323)
....|.||-+- .-++ .|-..||..||...+. ....|.+|.-.
T Consensus 78 ~~~yC~wC~~G---g~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~ 134 (159)
T 3a1b_A 78 YQSYCTICCGG---REVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHK 134 (159)
T ss_dssp SBSSCTTTSCC---SEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSS
T ss_pred CcceeeEecCC---CeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCc
Confidence 34479999875 2333 4667899999998876 35789999653
No 117
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=50.98 E-value=14 Score=25.56 Aligned_cols=51 Identities=20% Similarity=0.300 Sum_probs=30.5
Q ss_pred CCCCccccccccCCCCcEEccCCCcccHHHHHHhc-cCCCCCCCCCCCCCCchhhHHHH
Q 020671 256 DSLPFACFICRKPFVDPVVTKCKHYFCEHCALKHH-SKNKKCFVCNEPTLGIFNTALEI 313 (323)
Q Consensus 256 e~~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~-~~s~~CP~Cr~~t~gvfn~Ak~L 313 (323)
...++.|.+|...|.....+. .|. ..+. .....|+.|++.+....++..++
T Consensus 14 ~~~~~~C~~C~k~f~~~~~l~-~H~------~~H~~~~~~~C~~C~k~f~~~~~L~~H~ 65 (74)
T 2lce_A 14 SDKPYKCDRCQASFRYKGNLA-SHK------TVHTGEKPYRCNICGAQFNRPANLKTHT 65 (74)
T ss_dssp CCCSBCCTTSSCCBSCHHHHH-HHH------HHHCCCCSEECTTTCCEESCHHHHHHHH
T ss_pred CCCCeECCCCCceeCCHHHHH-HHH------HHcCCCCCEECCCCCchhCCHHHHHHHH
Confidence 456899999999887653221 110 1111 14468999988766555555544
No 118
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=50.21 E-value=8.1 Score=29.27 Aligned_cols=44 Identities=25% Similarity=0.646 Sum_probs=33.1
Q ss_pred CccccccccCCCCc-EEccCCCcccHHHHHHhccCCCCCCCCCCCCC
Q 020671 259 PFACFICRKPFVDP-VVTKCKHYFCEHCALKHHSKNKKCFVCNEPTL 304 (323)
Q Consensus 259 p~~C~IC~e~~~~P-Vvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~ 304 (323)
=|.|..|...|... ....=|..||..|..+.+ ...|..|..++.
T Consensus 33 CF~C~~C~~~L~~~~~~~~~g~~yC~~cy~~~~--~~~C~~C~~~I~ 77 (101)
T 2cup_A 33 CFRCAKCLHPLANETFVAKDNKILCNKCTTRED--SPKCKGCFKAIV 77 (101)
T ss_dssp TCCCSSSCCCTTSSCCEEETTEEECHHHHTTCC--CCBCSSSCCBCC
T ss_pred CCcccccCCCCCcCeeECcCCEEEChhHhhhhc--CCccccCCCccc
Confidence 36888898888643 344567889999987654 478999988765
No 119
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=50.05 E-value=7.6 Score=26.93 Aligned_cols=51 Identities=22% Similarity=0.384 Sum_probs=30.3
Q ss_pred CCCCccccccccCCCCcEEccCCCcccHHHHHHhc-cCCCCCCCCCCCCCCchhhHHHH
Q 020671 256 DSLPFACFICRKPFVDPVVTKCKHYFCEHCALKHH-SKNKKCFVCNEPTLGIFNTALEI 313 (323)
Q Consensus 256 e~~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~-~~s~~CP~Cr~~t~gvfn~Ak~L 313 (323)
...||.|.+|...|.....+. .|. ..+. .....|++|...+....++..++
T Consensus 11 ~~k~~~C~~C~k~f~~~~~L~-~H~------~~h~~~~~~~C~~C~~~f~~~~~L~~H~ 62 (72)
T 1x6e_A 11 GEKPYGCVECGKAFSRSSILV-QHQ------RVHTGEKPYKCLECGKAFSQNSGLINHQ 62 (72)
T ss_dssp TCCCEECSSSCCEESSHHHHH-HHH------HGGGCSCCEECSSSCCEESSHHHHHHHH
T ss_pred CCCCccCCCCCCccCCHHHHH-HHH------HhcCCCCCeECCCCCcccCCHHHHHHHH
Confidence 346899999998876543221 110 1111 24578999988766555555544
No 120
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=47.87 E-value=10 Score=25.04 Aligned_cols=47 Identities=26% Similarity=0.457 Sum_probs=25.9
Q ss_pred CccccccccCCCCcEEccCCCcccHHHHHHh-ccCCCCCCCCCCCCCCchhhHHH
Q 020671 259 PFACFICRKPFVDPVVTKCKHYFCEHCALKH-HSKNKKCFVCNEPTLGIFNTALE 312 (323)
Q Consensus 259 p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~-~~~s~~CP~Cr~~t~gvfn~Ak~ 312 (323)
||.|.+|...|.....+. .|. ..+ -.....|+.|+..+....++..+
T Consensus 2 ~~~C~~C~~~f~~~~~l~-~H~------~~h~~~~~~~C~~C~~~f~~~~~l~~H 49 (60)
T 2adr_A 2 SFVCEVCTRAFARQEHLK-RHY------RSHTNEKPYPCGLCNRAFTRRDLLIRH 49 (60)
T ss_dssp CBCCTTTCCCBSCHHHHH-HHH------HTTTSSCSEECTTTCCEESSHHHHHHH
T ss_pred cCcCCCCccccCCHHHHH-HHH------HHhCCCCCccCCCCCCccCCHHHHHHH
Confidence 688999998886653211 010 000 11346799998865544444333
No 121
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=47.84 E-value=2.6 Score=30.48 Aligned_cols=31 Identities=26% Similarity=0.528 Sum_probs=21.2
Q ss_pred cccccccCCCCc-----EEc-c--CCCcccHHHHHHhcc
Q 020671 261 ACFICRKPFVDP-----VVT-K--CKHYFCEHCALKHHS 291 (323)
Q Consensus 261 ~C~IC~e~~~~P-----Vvt-~--CGH~FC~~Ci~~~~~ 291 (323)
.||-|...+... ++- . |++.||+.|...|..
T Consensus 8 ~CP~C~~~Iek~~GCnhmtC~~~~C~~~FCw~C~~~~~~ 46 (60)
T 1wd2_A 8 ECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEP 46 (60)
T ss_dssp CCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSCSCSGG
T ss_pred ECcCCCCeeEeCCCCCcEEECCCCcCCEEeeCcCCCccc
Confidence 688888776432 222 2 888899988877754
No 122
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=46.94 E-value=4.1 Score=38.98 Aligned_cols=41 Identities=22% Similarity=0.513 Sum_probs=0.0
Q ss_pred ccccccccCCCCc----EEccCCCcccHHHHHHhcc-------CCCCCCCCC
Q 020671 260 FACFICRKPFVDP----VVTKCKHYFCEHCALKHHS-------KNKKCFVCN 300 (323)
Q Consensus 260 ~~C~IC~e~~~~P----Vvt~CGH~FC~~Ci~~~~~-------~s~~CP~Cr 300 (323)
..|.+|...|.-- .-..||+.||..|...... ..+.|-.|-
T Consensus 376 ~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~Cs~~~~~~~~~~~~~~rvC~~C~ 427 (434)
T 3mpx_A 376 MMCMNCGCDFSLTLRRHHCHACGKIVCRNCSRNKYPLKYLKDRMAKVCDGCF 427 (434)
T ss_dssp ----------------------------------------------------
T ss_pred CcCCCcCCCCCCcchhhhcccCcCEeehhhCCCeeeCCCCCCCcCEecHHHH
Confidence 4799999987421 1347999999999875432 346677773
No 123
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=46.81 E-value=29 Score=25.41 Aligned_cols=59 Identities=20% Similarity=0.341 Sum_probs=33.9
Q ss_pred CCCCCccccccccCCCCcE----------------EccCCCcccH-HHHHHhcc-----CCCCCCCCCCCCCCchhhHHH
Q 020671 255 EDSLPFACFICRKPFVDPV----------------VTKCKHYFCE-HCALKHHS-----KNKKCFVCNEPTLGIFNTALE 312 (323)
Q Consensus 255 ee~~p~~C~IC~e~~~~PV----------------vt~CGH~FC~-~Ci~~~~~-----~s~~CP~Cr~~t~gvfn~Ak~ 312 (323)
....++.|.+|...|.... -..|+-.|-. .-+..+.. ....|+.|...+....++..+
T Consensus 13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H 92 (106)
T 2ee8_A 13 KTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH 92 (106)
T ss_dssp CCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHH
T ss_pred CCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHH
Confidence 3456789999998885431 1234444422 22333332 347899998876655555555
Q ss_pred H
Q 020671 313 I 313 (323)
Q Consensus 313 L 313 (323)
+
T Consensus 93 ~ 93 (106)
T 2ee8_A 93 K 93 (106)
T ss_dssp H
T ss_pred H
Confidence 4
No 124
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.39 E-value=4.3 Score=30.70 Aligned_cols=57 Identities=14% Similarity=0.235 Sum_probs=33.4
Q ss_pred CCCccccccccCCCCcE----------EccCCCcc-cHHHHHHh--cc--------------CCCCCCCCCCCCCCchhh
Q 020671 257 SLPFACFICRKPFVDPV----------VTKCKHYF-CEHCALKH--HS--------------KNKKCFVCNEPTLGIFNT 309 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~PV----------vt~CGH~F-C~~Ci~~~--~~--------------~s~~CP~Cr~~t~gvfn~ 309 (323)
..||.|.+|...|.... ...+...+ |..|-..+ .. ....|++|...+....++
T Consensus 17 ~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L 96 (115)
T 2dmi_A 17 ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDL 96 (115)
T ss_dssp CCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHH
T ss_pred CCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHHH
Confidence 46789999998875542 12233333 55554332 11 346899998876655555
Q ss_pred HHHH
Q 020671 310 ALEI 313 (323)
Q Consensus 310 Ak~L 313 (323)
..++
T Consensus 97 ~~H~ 100 (115)
T 2dmi_A 97 SVHM 100 (115)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 125
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=45.98 E-value=29 Score=28.76 Aligned_cols=41 Identities=22% Similarity=0.621 Sum_probs=28.0
Q ss_pred cccccccCCCCcEEccCCCcccHHHHHHhc-----------cCCCCCCCCCC
Q 020671 261 ACFICRKPFVDPVVTKCKHYFCEHCALKHH-----------SKNKKCFVCNE 301 (323)
Q Consensus 261 ~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~-----------~~s~~CP~Cr~ 301 (323)
.|.||.+--.=..--.|-..||..|+...+ .....|+.|.-
T Consensus 59 ~C~vC~dGG~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 59 QCRWCAEGGNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp SCTTTCCCSEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred cCeecCCCCeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 599998752211112677889999998642 25689999954
No 126
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=45.43 E-value=26 Score=26.01 Aligned_cols=45 Identities=13% Similarity=0.480 Sum_probs=27.0
Q ss_pred CCCCccccccccCCCCcEEc-----cCCCcccHHHHHHhcc---------CCCCCCCCCC
Q 020671 256 DSLPFACFICRKPFVDPVVT-----KCKHYFCEHCALKHHS---------KNKKCFVCNE 301 (323)
Q Consensus 256 e~~p~~C~IC~e~~~~PVvt-----~CGH~FC~~Ci~~~~~---------~s~~CP~Cr~ 301 (323)
...+..| ||........++ .|...|-..|+--... ....||.|+.
T Consensus 13 ~~~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~ 71 (78)
T 1wew_A 13 PEIKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRL 71 (78)
T ss_dssp CCCCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHH
T ss_pred CCCCEEe-ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCc
Confidence 3456678 899985444444 4555677777742211 3567877754
No 127
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=44.11 E-value=2 Score=35.44 Aligned_cols=42 Identities=24% Similarity=0.694 Sum_probs=28.4
Q ss_pred ccccccccCCCCc----EEccCCCcccHHHHHHhccCCCCCCCCCC
Q 020671 260 FACFICRKPFVDP----VVTKCKHYFCEHCALKHHSKNKKCFVCNE 301 (323)
Q Consensus 260 ~~C~IC~e~~~~P----Vvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~ 301 (323)
..|..|...|..- .--.||..||..|........+.|-.|-.
T Consensus 20 ~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~~ 65 (120)
T 1y02_A 20 PSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQR 65 (120)
T ss_dssp CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHH
T ss_pred CcccCcCCccccccccccCCCCCCeeCHHHhCCCCCCceECHHHHH
Confidence 3799999988532 12479999999997665555677877743
No 128
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=43.48 E-value=4.9 Score=26.14 Aligned_cols=15 Identities=27% Similarity=0.454 Sum_probs=11.8
Q ss_pred CccccccccCCCCcE
Q 020671 259 PFACFICRKPFVDPV 273 (323)
Q Consensus 259 p~~C~IC~e~~~~PV 273 (323)
.|.||||+..+.++.
T Consensus 5 GFiCP~C~~~l~s~~ 19 (34)
T 3mjh_B 5 GFICPQCMKSLGSAD 19 (34)
T ss_dssp EEECTTTCCEESSHH
T ss_pred ccCCcHHHHHcCCHH
Confidence 588999998887663
No 129
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=42.56 E-value=34 Score=24.82 Aligned_cols=40 Identities=20% Similarity=0.515 Sum_probs=29.0
Q ss_pred cccccccCCCCcEEc--cCCCcccHHHHHHhcc----CCCCCCCCCCC
Q 020671 261 ACFICRKPFVDPVVT--KCKHYFCEHCALKHHS----KNKKCFVCNEP 302 (323)
Q Consensus 261 ~C~IC~e~~~~PVvt--~CGH~FC~~Ci~~~~~----~s~~CP~Cr~~ 302 (323)
.|.||.+.- -++. .|...|...|+...+. ....|+.|...
T Consensus 14 ~C~vC~~~~--~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 14 RCGVCGDGT--DVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGD 59 (66)
T ss_dssp CCTTTSCCT--TCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTC
T ss_pred CcCCCCCCC--eEEECCCCCCceecccCCCccCcCCCCCEECccccCC
Confidence 699998742 2332 6888899999865554 55789999764
No 130
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=41.97 E-value=28 Score=24.96 Aligned_cols=16 Identities=38% Similarity=0.652 Sum_probs=12.3
Q ss_pred CCCccccccccCCCCc
Q 020671 257 SLPFACFICRKPFVDP 272 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~P 272 (323)
..+|.|.+|...|...
T Consensus 6 ~~~~~C~~C~~~f~~~ 21 (96)
T 2dmd_A 6 SGPHKCEVCGKCFSRK 21 (96)
T ss_dssp CCCCCBTTTTBCCCCH
T ss_pred CcCeECCCCCCccCCH
Confidence 4678999999888543
No 131
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=40.95 E-value=51 Score=23.59 Aligned_cols=59 Identities=25% Similarity=0.371 Sum_probs=34.7
Q ss_pred CCCCCccccc--cccCCCCc---------------EEc---cCCCcccHHHHH-Hhcc-----CCCCCCCCCCCCCCchh
Q 020671 255 EDSLPFACFI--CRKPFVDP---------------VVT---KCKHYFCEHCAL-KHHS-----KNKKCFVCNEPTLGIFN 308 (323)
Q Consensus 255 ee~~p~~C~I--C~e~~~~P---------------Vvt---~CGH~FC~~Ci~-~~~~-----~s~~CP~Cr~~t~gvfn 308 (323)
+...++.|.+ |...|... ..- .|+-.|-..-.+ .+.. ....|++|+..+....+
T Consensus 11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~ 90 (100)
T 2ebt_A 11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDH 90 (100)
T ss_dssp CSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHH
T ss_pred ccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHH
Confidence 4556789997 99887433 221 366666443332 2222 45789999887655555
Q ss_pred hHHHH
Q 020671 309 TALEI 313 (323)
Q Consensus 309 ~Ak~L 313 (323)
+..++
T Consensus 91 l~~H~ 95 (100)
T 2ebt_A 91 LALHM 95 (100)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
No 132
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=40.78 E-value=11 Score=26.09 Aligned_cols=21 Identities=29% Similarity=0.362 Sum_probs=12.4
Q ss_pred CCCCCCCCCCCCCCchhhHHH
Q 020671 292 KNKKCFVCNEPTLGIFNTALE 312 (323)
Q Consensus 292 ~s~~CP~Cr~~t~gvfn~Ak~ 312 (323)
....|+.|+..+....++..+
T Consensus 56 ~~~~C~~C~~~f~~~~~l~~H 76 (82)
T 2kmk_A 56 KPHKCQVCGKAFSQSSNLITH 76 (82)
T ss_dssp CCEECTTTSCEESSHHHHHHH
T ss_pred CCCcCCCcchhhCChHHHHHH
Confidence 446788887765444444433
No 133
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=40.71 E-value=18 Score=25.17 Aligned_cols=46 Identities=22% Similarity=0.316 Sum_probs=28.3
Q ss_pred CCCCccccccccCCCCcEEccCCCcccHHHHHHhc-----cCCCCCCCCCCCCCCchhhHHH
Q 020671 256 DSLPFACFICRKPFVDPVVTKCKHYFCEHCALKHH-----SKNKKCFVCNEPTLGIFNTALE 312 (323)
Q Consensus 256 e~~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~-----~~s~~CP~Cr~~t~gvfn~Ak~ 312 (323)
...++.|.+|...|.....+ ..+. .....|++|...+....++..+
T Consensus 15 ~~~~~~C~~C~~~f~~~~~l-----------~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H 65 (77)
T 2cot_A 15 ERRRYKCDECGKSFSHSSDL-----------SKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65 (77)
T ss_dssp CSCSSBCSSSCCBCSCHHHH-----------HHHHTTTCCSCSEECSSSCCEESSHHHHHHH
T ss_pred CCCCEECCCCCcccCCHHHH-----------HHHHHHcCCCcCeeCCCCCCccCCHHHHHHH
Confidence 45689999999988755322 1111 1346799998765544444433
No 134
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle; NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Probab=40.04 E-value=27 Score=29.73 Aligned_cols=44 Identities=23% Similarity=0.418 Sum_probs=34.1
Q ss_pred CccccccccCCCC-cEEccCCCcccHHHHHHhccCCCCCCCCCCCCC
Q 020671 259 PFACFICRKPFVD-PVVTKCKHYFCEHCALKHHSKNKKCFVCNEPTL 304 (323)
Q Consensus 259 p~~C~IC~e~~~~-PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~ 304 (323)
=|.|..|...|.. .....=+..||..|..+.+. ..|..|+...+
T Consensus 142 CF~C~~C~~~L~~~~~~~~~g~~yC~~cy~~~f~--~kc~~C~~~~g 186 (192)
T 1b8t_A 142 CFRCAKCGKSLESTTLADKDGEIYCKGCYAKNFG--PKGFGFGQGAG 186 (192)
T ss_dssp TCBCTTTCCBCCSSSEEEETTEEEEHHHHHHHTC--CCCCCCCCCCC
T ss_pred cCCccccCCCCCCCcccccCCEEeCHHHHHHhcC--CcCCCCCCccc
Confidence 4788999988853 34556678999999988764 68999988753
No 135
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=39.44 E-value=27 Score=24.96 Aligned_cols=21 Identities=14% Similarity=0.026 Sum_probs=13.3
Q ss_pred CCCCCCCCCCCCCchhhHHHH
Q 020671 293 NKKCFVCNEPTLGIFNTALEI 313 (323)
Q Consensus 293 s~~CP~Cr~~t~gvfn~Ak~L 313 (323)
...|+.|...+....++..++
T Consensus 65 ~~~C~~C~~~f~~~~~L~~H~ 85 (95)
T 2yt9_A 65 PYICQSCGKGFSRPDHLNGHI 85 (95)
T ss_dssp SBCCSSSCCCBSSHHHHHHHH
T ss_pred ceECCCccchhCCHHHHHHHH
Confidence 467999987765554444444
No 136
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=38.20 E-value=30 Score=21.78 Aligned_cols=18 Identities=39% Similarity=0.575 Sum_probs=13.6
Q ss_pred CCCCCccccccccCCCCc
Q 020671 255 EDSLPFACFICRKPFVDP 272 (323)
Q Consensus 255 ee~~p~~C~IC~e~~~~P 272 (323)
....+|.|.+|...|...
T Consensus 8 ~~~k~~~C~~C~k~f~~~ 25 (48)
T 2epr_A 8 RTRKQVACEICGKIFRDV 25 (48)
T ss_dssp CCCCSEEETTTTEEESSH
T ss_pred CCCcCeeCCCCCcccCCH
Confidence 345689999998887654
No 137
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=38.11 E-value=23 Score=27.89 Aligned_cols=44 Identities=20% Similarity=0.437 Sum_probs=31.8
Q ss_pred ccccccccCCC-----CcE--EccCCCcccHHHHHHhcc-CCCCCCCCCCCC
Q 020671 260 FACFICRKPFV-----DPV--VTKCKHYFCEHCALKHHS-KNKKCFVCNEPT 303 (323)
Q Consensus 260 ~~C~IC~e~~~-----~PV--vt~CGH~FC~~Ci~~~~~-~s~~CP~Cr~~t 303 (323)
-.|.||.+.+- ++. .-.|+-..|..|..--++ .+..||.|....
T Consensus 17 qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrY 68 (93)
T 1weo_A 17 QFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRY 68 (93)
T ss_dssp CBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCC
T ss_pred CccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhccCccccccCCcc
Confidence 47999998861 122 236777889999875444 789999998764
No 138
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=37.93 E-value=20 Score=22.17 Aligned_cols=17 Identities=24% Similarity=0.681 Sum_probs=12.8
Q ss_pred CCCCccccccccCCCCc
Q 020671 256 DSLPFACFICRKPFVDP 272 (323)
Q Consensus 256 e~~p~~C~IC~e~~~~P 272 (323)
.+.|+.|.+|...|...
T Consensus 7 ~~k~~~C~~C~k~f~~~ 23 (45)
T 2epq_A 7 GEKPYSCPVCGLRFKRK 23 (45)
T ss_dssp SCCSSEETTTTEECSCH
T ss_pred CCCCCcCCCCCcccCCH
Confidence 34589999998887654
No 139
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=37.50 E-value=12 Score=30.61 Aligned_cols=29 Identities=31% Similarity=0.829 Sum_probs=21.9
Q ss_pred cccccccCCCCc----EEccCCCcccHHHHHHh
Q 020671 261 ACFICRKPFVDP----VVTKCKHYFCEHCALKH 289 (323)
Q Consensus 261 ~C~IC~e~~~~P----Vvt~CGH~FC~~Ci~~~ 289 (323)
.|.+|...|.-- ---.||+.||..|....
T Consensus 71 ~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~~ 103 (125)
T 1joc_A 71 NCMACGKGFSVTVRRHHCRQCGNIFCAECSAKN 103 (125)
T ss_dssp BCTTTCCBCCSSSCCEECTTTCCEECGGGSCEE
T ss_pred CCcCcCCccccccccccCCCCCeEEChHHhCCc
Confidence 699999988522 12479999999997654
No 140
>3v33_A Ribonuclease ZC3H12A; rossmann-like sandwich fold, RNAse, cytoplastic, hydrolase; 2.00A {Homo sapiens}
Probab=36.83 E-value=6.8 Score=35.59 Aligned_cols=44 Identities=30% Similarity=0.687 Sum_probs=9.6
Q ss_pred CCCCCCCCcccCceeecce-eeccCCCCccccccccccCCCCccceeec
Q 020671 163 KAGGSHGPLRASAHIRVTA-RFDYQPDICKDYKETGYCGYGDSCKFMHD 210 (323)
Q Consensus 163 ~~~~~~gP~ra~~nir~t~-~~DyqPDiCKdYkeTG~CgfGDsCkFlHd 210 (323)
-+-|+.||--. ..+|... .-+-.+-+| .|-. -|.||-.|||.|-
T Consensus 168 DplgR~Gp~l~-~~L~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~ 212 (223)
T 3v33_A 168 DPLGRHGPSLD-NFLRKKPLTLEHRKQPC-PYGR--KCTYGIKCRFFHP 212 (223)
T ss_dssp STTCTTSCCHH-HHTBSCC------------------------------
T ss_pred CcccCCCCCHH-HHhccCCCCcccCCCCC-CCCc--ccccCCcceecCC
Confidence 45688998532 2334332 234457788 4533 4999999999995
No 141
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=36.51 E-value=13 Score=28.60 Aligned_cols=31 Identities=23% Similarity=0.576 Sum_probs=22.8
Q ss_pred ccccccccCCCCc----EEccCCCcccHHHHHHhc
Q 020671 260 FACFICRKPFVDP----VVTKCKHYFCEHCALKHH 290 (323)
Q Consensus 260 ~~C~IC~e~~~~P----Vvt~CGH~FC~~Ci~~~~ 290 (323)
..|.+|...|.-- .-..||+.||..|.....
T Consensus 21 ~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~~~ 55 (90)
T 3t7l_A 21 PNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRKC 55 (90)
T ss_dssp CBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEEE
T ss_pred CcCcCCCCcccchhhCccccCCCCEECCcccCCee
Confidence 3699999987421 234799999999987543
No 142
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=35.73 E-value=17 Score=27.43 Aligned_cols=30 Identities=23% Similarity=0.511 Sum_probs=22.4
Q ss_pred ccccccccCCCCc----EEccCCCcccHHHHHHh
Q 020671 260 FACFICRKPFVDP----VVTKCKHYFCEHCALKH 289 (323)
Q Consensus 260 ~~C~IC~e~~~~P----Vvt~CGH~FC~~Ci~~~ 289 (323)
..|.+|...|.-- ---.||+.||..|....
T Consensus 22 ~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~ 55 (84)
T 1z2q_A 22 PACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRHR 55 (84)
T ss_dssp CBCTTTCCBCCTTSCCEECTTTCCEECTGGGCCE
T ss_pred CCCcCcCCccccchhcccccCCCcEEChHHhCCe
Confidence 3799999988422 12479999999997654
No 143
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=34.94 E-value=5.7 Score=29.94 Aligned_cols=20 Identities=30% Similarity=0.783 Sum_probs=16.5
Q ss_pred cCCCcccHHHHHHhccCCCCCC
Q 020671 276 KCKHYFCEHCALKHHSKNKKCF 297 (323)
Q Consensus 276 ~CGH~FC~~Ci~~~~~~s~~CP 297 (323)
.|++.||..|...|.. ..|.
T Consensus 55 ~C~~~FC~~C~~~wH~--~~C~ 74 (80)
T 2jmo_A 55 GCGFAFCRECKEAYHE--GECS 74 (80)
T ss_dssp CCSCCEETTTTEECCS--SCSS
T ss_pred CCCCeeccccCccccC--Cccc
Confidence 5899999999998876 5664
No 144
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=34.56 E-value=18 Score=25.95 Aligned_cols=49 Identities=20% Similarity=0.321 Sum_probs=25.3
Q ss_pred CCccccccccCCCCcEEccCCCcccHHHHHHhccCCCCCCCCCCCCCCchhhHHH
Q 020671 258 LPFACFICRKPFVDPVVTKCKHYFCEHCALKHHSKNKKCFVCNEPTLGIFNTALE 312 (323)
Q Consensus 258 ~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~gvfn~Ak~ 312 (323)
.|+.|.+|...|.....+. .|. ....-.....|+.|+..+....++..+
T Consensus 2 k~~~C~~C~k~f~~~~~L~-~H~-----~~H~~~~~~~C~~C~k~f~~~~~L~~H 50 (88)
T 1llm_C 2 KPFQCRICMRNFSRSDHLT-THI-----RTHTGEKPFACDICGRKFARSDERKRH 50 (88)
T ss_dssp CCEECTTTCCEESCHHHHH-HHH-----HHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred CCCcCCCCCCccCCHHHHH-HHH-----HHcCCCCCccCCCCCCccCCHHHHHHH
Confidence 4788999988876542211 110 000111345788887765544444443
No 145
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=34.48 E-value=28 Score=23.41 Aligned_cols=43 Identities=26% Similarity=0.525 Sum_probs=26.2
Q ss_pred cccccccCCCCc-EEc--cCCCcccHHHHHHhcc----CCCCCCCCCCCC
Q 020671 261 ACFICRKPFVDP-VVT--KCKHYFCEHCALKHHS----KNKKCFVCNEPT 303 (323)
Q Consensus 261 ~C~IC~e~~~~P-Vvt--~CGH~FC~~Ci~~~~~----~s~~CP~Cr~~t 303 (323)
.|.||...-... ++. .|...|-..|+..-+. ....||.|...|
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~~t 51 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPAT 51 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSCCC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccccC
Confidence 377777653222 222 5666788888854333 457799997643
No 146
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=34.41 E-value=24 Score=26.20 Aligned_cols=46 Identities=20% Similarity=0.353 Sum_probs=28.1
Q ss_pred CCccccccccCCCCcEEccCCCcccHHHHHHhcc-----CCCCCCCCCCCCCCchhhHHHHH
Q 020671 258 LPFACFICRKPFVDPVVTKCKHYFCEHCALKHHS-----KNKKCFVCNEPTLGIFNTALEIR 314 (323)
Q Consensus 258 ~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~-----~s~~CP~Cr~~t~gvfn~Ak~L~ 314 (323)
.++.|.+|...|..... +..++. ....|+.|...+....++..+++
T Consensus 36 ~~~~C~~C~~~f~~~~~-----------l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~ 86 (110)
T 2csh_A 36 RPYGCGVCGKKFKMKHH-----------LVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVT 86 (110)
T ss_dssp CSEECTTTSCEESSSHH-----------HHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred cCccCCCCCcccCCHHH-----------HHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHH
Confidence 46788888777655422 112221 34689999987766666666653
No 147
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=33.95 E-value=18 Score=27.19 Aligned_cols=29 Identities=31% Similarity=0.780 Sum_probs=22.0
Q ss_pred cccccccCCCCcE----EccCCCcccHHHHHHh
Q 020671 261 ACFICRKPFVDPV----VTKCKHYFCEHCALKH 289 (323)
Q Consensus 261 ~C~IC~e~~~~PV----vt~CGH~FC~~Ci~~~ 289 (323)
.|.+|...|.--. --.||..||..|....
T Consensus 21 ~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~ 53 (82)
T 2yw8_A 21 HCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNE 53 (82)
T ss_dssp BCTTTCCBCBTTBCCEECTTTCCEECSGGGCEE
T ss_pred cccCcCCcccCccccccCCCCCCEEChHHhCCe
Confidence 6999999885221 2479999999998654
No 148
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=33.90 E-value=36 Score=23.83 Aligned_cols=33 Identities=21% Similarity=0.517 Sum_probs=23.6
Q ss_pred CccccccccCCCCc-EEccCCCcccHHHHHHhcc
Q 020671 259 PFACFICRKPFVDP-VVTKCKHYFCEHCALKHHS 291 (323)
Q Consensus 259 p~~C~IC~e~~~~P-Vvt~CGH~FC~~Ci~~~~~ 291 (323)
=|.|..|...|... ....=+..||..|..+.+.
T Consensus 33 CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~~~~ 66 (72)
T 1x61_A 33 CFVCSTCRAQLRGQHFYAVERRAYCEGCYVATLE 66 (72)
T ss_dssp TCBCSSSCCBCTTSCEEESSSCEEEHHHHHHHHH
T ss_pred CCcccccCCcCCcCcCEeeCCeEECHHHHHHHHc
Confidence 36788888887533 4455677899999887765
No 149
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=33.46 E-value=12 Score=32.73 Aligned_cols=41 Identities=20% Similarity=0.451 Sum_probs=27.1
Q ss_pred cccccccCCCCcEEc--cCCCcccHHHHHHhcc----CCCCCCCCCCCC
Q 020671 261 ACFICRKPFVDPVVT--KCKHYFCEHCALKHHS----KNKKCFVCNEPT 303 (323)
Q Consensus 261 ~C~IC~e~~~~PVvt--~CGH~FC~~Ci~~~~~----~s~~CP~Cr~~t 303 (323)
.|.+|...=. ++. .|...|...|+...+. ....||.|....
T Consensus 9 ~C~~C~~~g~--ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 9 WCAVCQNGGD--LLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp SBTTTCCCEE--EEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCc--eEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCcc
Confidence 5999986421 222 5677788888755443 568899998743
No 150
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.90 E-value=18 Score=27.19 Aligned_cols=30 Identities=23% Similarity=0.533 Sum_probs=21.8
Q ss_pred ccccccccCCCCcE----EccCCCcccHHHHHHh
Q 020671 260 FACFICRKPFVDPV----VTKCKHYFCEHCALKH 289 (323)
Q Consensus 260 ~~C~IC~e~~~~PV----vt~CGH~FC~~Ci~~~ 289 (323)
..|.+|...|.--. --.||.+||..|....
T Consensus 15 ~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~ 48 (84)
T 1x4u_A 15 GNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSFK 48 (84)
T ss_dssp SSCSSSCCCCCSSSCCEECSSSCCEECTTTSCEE
T ss_pred CcCcCcCCccccchhhhhhcCCCcEEChhhcCCc
Confidence 37999999884221 2479999999997543
No 151
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.27 E-value=26 Score=25.88 Aligned_cols=52 Identities=19% Similarity=0.165 Sum_probs=31.0
Q ss_pred CCCccccccccCCC-CcEEccCCCcccHHHHHHhccCCCCCCCCCCCCCCchhhHHHH
Q 020671 257 SLPFACFICRKPFV-DPVVTKCKHYFCEHCALKHHSKNKKCFVCNEPTLGIFNTALEI 313 (323)
Q Consensus 257 ~~p~~C~IC~e~~~-~PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~gvfn~Ak~L 313 (323)
..+|.|.+|...|. ....+. .|.- .... ......|++|.+.+....++..++
T Consensus 22 ~~~~~C~~C~k~f~~~~~~L~-~H~~--~h~~--~~~~~~C~~C~k~F~~~~~L~~H~ 74 (98)
T 2gqj_A 22 RGEAVCPTCNVVTRKTLVGLK-KHME--VCQK--LQDALKCQHCRKQFKSKAGLNYHT 74 (98)
T ss_dssp TSCCCCTTTCCCCSSCSHHHH-HHHH--HHHH--HHHHHSCSSSCCCCSCHHHHHHHH
T ss_pred CCCcCCCCCCCChhhhHHHHH-HHHH--HHcC--CCCCEECCCCCCccCCHHHHHHHH
Confidence 46899999999987 653322 2210 0000 012468999998876666666554
No 152
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=32.09 E-value=26 Score=24.30 Aligned_cols=51 Identities=22% Similarity=0.484 Sum_probs=28.5
Q ss_pred CCCccccccccCCCCcEEccCCCcccHHHHHHhcc--CCCCCCCCCCCCCCchhhHHHH
Q 020671 257 SLPFACFICRKPFVDPVVTKCKHYFCEHCALKHHS--KNKKCFVCNEPTLGIFNTALEI 313 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~--~s~~CP~Cr~~t~gvfn~Ak~L 313 (323)
..||.|.+|...|.....+. .|. ...+.. ....|+.|...+....++..++
T Consensus 13 ~k~~~C~~C~k~f~~~~~L~-~H~-----~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~ 65 (77)
T 2ct1_A 13 EKPYECYICHARFTQSGTMK-MHI-----LQKHTENVAKFHCPHCDTVIARKSDLGVHL 65 (77)
T ss_dssp CCSEECTTTCCEESCHHHHH-HHH-----HHHSSSSCSSEECSSSSCEESSHHHHHHHH
T ss_pred CCCeECCCcCchhCCHHHHH-HHH-----HHhcCCCCCccCCCCCCCccCCHHHHHHHH
Confidence 46899999998886643221 110 001111 3468999988755444444443
No 153
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=30.81 E-value=24 Score=30.81 Aligned_cols=47 Identities=23% Similarity=0.488 Sum_probs=29.9
Q ss_pred cccccccCCCCcE----Ec---cCCCcccHHHHHHh------cc-----CCCCCCCCCCCCCCch
Q 020671 261 ACFICRKPFVDPV----VT---KCKHYFCEHCALKH------HS-----KNKKCFVCNEPTLGIF 307 (323)
Q Consensus 261 ~C~IC~e~~~~PV----vt---~CGH~FC~~Ci~~~------~~-----~s~~CP~Cr~~t~gvf 307 (323)
.|+||...+...- ++ .|...|-..|..-. +. ....||.|+...+...
T Consensus 4 ~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~~~~ 68 (183)
T 3lqh_A 4 FCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHPAEW 68 (183)
T ss_dssp BCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSSCHH
T ss_pred cCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCCHHH
Confidence 5999999886542 44 45556666665221 10 1589999988766544
No 154
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=30.36 E-value=51 Score=24.19 Aligned_cols=46 Identities=17% Similarity=0.417 Sum_probs=27.5
Q ss_pred CCCCccccccccCCCCcEEcc-----CC-CcccHHHHHHhc--cCCCCCCCCCCCC
Q 020671 256 DSLPFACFICRKPFVDPVVTK-----CK-HYFCEHCALKHH--SKNKKCFVCNEPT 303 (323)
Q Consensus 256 e~~p~~C~IC~e~~~~PVvt~-----CG-H~FC~~Ci~~~~--~~s~~CP~Cr~~t 303 (323)
...+.-| ||....... ++. |. ..|-..|+--.. .....||.|....
T Consensus 13 ~~~~~~C-~C~~~~~g~-MI~CD~~~C~~~wfH~~Cvgl~~~p~g~w~Cp~C~~~~ 66 (71)
T 1wen_A 13 PNEPTYC-LCHQVSYGE-MIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQES 66 (71)
T ss_dssp TTSCCCS-TTCCCSCSS-EECCSCSSCSCCCEETTTTTCSSCCSSCCCCTTTSSCS
T ss_pred CCCCCEE-ECCCCCCCC-EeEeeCCCCCCccEecccCCcCcCCCCCEECCCCCccc
Confidence 3345578 899875443 443 44 356667764211 1568899997653
No 155
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=30.34 E-value=15 Score=32.72 Aligned_cols=29 Identities=31% Similarity=0.687 Sum_probs=22.0
Q ss_pred cccccccCCCCc----EEccCCCcccHHHHHHh
Q 020671 261 ACFICRKPFVDP----VVTKCKHYFCEHCALKH 289 (323)
Q Consensus 261 ~C~IC~e~~~~P----Vvt~CGH~FC~~Ci~~~ 289 (323)
.|.+|...|.-- --..||+.||..|....
T Consensus 166 ~C~~C~~~F~~~~RrhHCR~CG~v~C~~Cs~~~ 198 (226)
T 3zyq_A 166 ECHRCRVQFGVMTRKHHCRACGQIFCGKCSSKY 198 (226)
T ss_dssp BCTTTCCBCBTTBCCEECTTTCCEECTTTCCEE
T ss_pred CCcCcCCCCCccccccccCCCcCEeChhhcCCc
Confidence 799999888422 13479999999997653
No 156
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=30.06 E-value=39 Score=24.53 Aligned_cols=43 Identities=19% Similarity=0.357 Sum_probs=28.1
Q ss_pred CCccccccccCCCCcEEc---cCCCcccHHHHHHhcc----CCCCCCCCC
Q 020671 258 LPFACFICRKPFVDPVVT---KCKHYFCEHCALKHHS----KNKKCFVCN 300 (323)
Q Consensus 258 ~p~~C~IC~e~~~~PVvt---~CGH~FC~~Ci~~~~~----~s~~CP~Cr 300 (323)
....|.||......-.++ .|...|-..|+--... ....||.|.
T Consensus 17 ~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~ 66 (75)
T 2k16_A 17 QIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCA 66 (75)
T ss_dssp EEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTH
T ss_pred CCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhcc
Confidence 345699999876432233 5666788888754433 357899994
No 157
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=30.00 E-value=61 Score=24.02 Aligned_cols=15 Identities=27% Similarity=0.598 Sum_probs=11.2
Q ss_pred CCccccccccCCCCc
Q 020671 258 LPFACFICRKPFVDP 272 (323)
Q Consensus 258 ~p~~C~IC~e~~~~P 272 (323)
.++.|.+|...|...
T Consensus 6 ~~~~C~~C~~~f~~~ 20 (124)
T 2dlq_A 6 SGVECPTCHKKFLSK 20 (124)
T ss_dssp SSCCCTTTCCCCSSH
T ss_pred CCCCCCCCCCcCCCH
Confidence 567899998887544
No 158
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=29.92 E-value=20 Score=26.35 Aligned_cols=28 Identities=32% Similarity=0.688 Sum_probs=21.1
Q ss_pred cccccccCCCCcE----EccCCCcccHHHHHH
Q 020671 261 ACFICRKPFVDPV----VTKCKHYFCEHCALK 288 (323)
Q Consensus 261 ~C~IC~e~~~~PV----vt~CGH~FC~~Ci~~ 288 (323)
.|.+|...|.--. --.||..||..|...
T Consensus 13 ~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~~ 44 (73)
T 1vfy_A 13 ACMICSKKFSLLNRKHHCRSCGGVFCQEHSSN 44 (73)
T ss_dssp BCTTTCCBCBTTBCCEECTTTCCEECGGGSCE
T ss_pred cccCCCCccCCccccccCCCCCEEEcccccCC
Confidence 6999999875221 247999999999754
No 159
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=29.75 E-value=46 Score=25.84 Aligned_cols=47 Identities=17% Similarity=0.417 Sum_probs=27.7
Q ss_pred CCCCCccccccccCCCCcEEcc-----CC-CcccHHHHHHhc--cCCCCCCCCCCCC
Q 020671 255 EDSLPFACFICRKPFVDPVVTK-----CK-HYFCEHCALKHH--SKNKKCFVCNEPT 303 (323)
Q Consensus 255 ee~~p~~C~IC~e~~~~PVvt~-----CG-H~FC~~Ci~~~~--~~s~~CP~Cr~~t 303 (323)
+...+.-| ||...... .++. |. ..|-..|+--.. .....||.|....
T Consensus 32 d~~e~~yC-iC~~~~~g-~MI~CD~~dC~~~WfH~~CVgl~~~p~g~W~Cp~C~~~~ 86 (91)
T 1weu_A 32 DPNEPTYC-LCHQVSYG-EMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQES 86 (91)
T ss_dssp CSCCCBCS-TTCCBCCS-CCCCCSCSSCSCCCCCSTTTTCSSCCCSSCCCTTTCCCC
T ss_pred CCCCCcEE-ECCCCCCC-CEeEecCCCCCCCCEecccCCcCcCCCCCEECcCccCcC
Confidence 34455678 99997543 3443 43 346666664211 1468899997653
No 160
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=29.60 E-value=35 Score=24.15 Aligned_cols=42 Identities=14% Similarity=0.391 Sum_probs=29.1
Q ss_pred CCccccccccCCCCcEEc--cCCCcccHHHHHHhcc----CCCCCCCCCC
Q 020671 258 LPFACFICRKPFVDPVVT--KCKHYFCEHCALKHHS----KNKKCFVCNE 301 (323)
Q Consensus 258 ~p~~C~IC~e~~~~PVvt--~CGH~FC~~Ci~~~~~----~s~~CP~Cr~ 301 (323)
....|.||... .-++. .|...|-..|+..-+. ....||.|..
T Consensus 10 ~~~~C~vC~~~--g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~ 57 (61)
T 2l5u_A 10 HQDYCEVCQQG--GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK 57 (61)
T ss_dssp CCSSCTTTSCC--SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGG
T ss_pred CCCCCccCCCC--CcEEECCCCChhhhhhccCCCCCCCCCCceECccccc
Confidence 34479999974 23332 5777899999986443 5688999965
No 161
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=28.78 E-value=16 Score=32.24 Aligned_cols=30 Identities=30% Similarity=0.731 Sum_probs=21.9
Q ss_pred ccccccccCCCCc----EEccCCCcccHHHHHHh
Q 020671 260 FACFICRKPFVDP----VVTKCKHYFCEHCALKH 289 (323)
Q Consensus 260 ~~C~IC~e~~~~P----Vvt~CGH~FC~~Ci~~~ 289 (323)
..|.+|...|.-- ---.||+.||..|....
T Consensus 162 ~~C~~C~~~F~~~~rrhhCr~CG~v~C~~Cs~~~ 195 (220)
T 1dvp_A 162 RVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQ 195 (220)
T ss_dssp SBCTTTCCBCCSSSCCEECTTTCCEECSTTSCEE
T ss_pred CccCCCCCccCCcccccccCCcCCEEChHHhCCe
Confidence 3799999987421 12479999999997643
No 162
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=28.60 E-value=22 Score=27.31 Aligned_cols=29 Identities=24% Similarity=0.575 Sum_probs=21.6
Q ss_pred cccccccCCCCcE----EccCCCcccHHHHHHh
Q 020671 261 ACFICRKPFVDPV----VTKCKHYFCEHCALKH 289 (323)
Q Consensus 261 ~C~IC~e~~~~PV----vt~CGH~FC~~Ci~~~ 289 (323)
.|.+|...|.--. --.||.+||..|....
T Consensus 11 ~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~ 43 (88)
T 1wfk_A 11 RCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFS 43 (88)
T ss_dssp BCTTTCCBCCSSSCEEECSSSCCEEETTTSCEE
T ss_pred CCcCcCCcccCccccccCCCCCCEEChhHcCCc
Confidence 6999999874221 2479999999997653
No 163
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=28.33 E-value=19 Score=29.05 Aligned_cols=25 Identities=20% Similarity=0.393 Sum_probs=16.6
Q ss_pred EccCCCcccHHHHHHhccCCCCCCCCCCCC
Q 020671 274 VTKCKHYFCEHCALKHHSKNKKCFVCNEPT 303 (323)
Q Consensus 274 vt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t 303 (323)
-..||+.|+ ..+.....||.|+..+
T Consensus 70 C~~CG~~F~-----~~~~kPsrCP~CkSe~ 94 (105)
T 2gmg_A 70 CRKCGFVFK-----AEINIPSRCPKCKSEW 94 (105)
T ss_dssp BTTTCCBCC-----CCSSCCSSCSSSCCCC
T ss_pred hhhCcCeec-----ccCCCCCCCcCCCCCc
Confidence 346888882 2334568999998753
No 164
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.33 E-value=51 Score=20.11 Aligned_cols=16 Identities=31% Similarity=0.540 Sum_probs=12.6
Q ss_pred CCCccccccccCCCCc
Q 020671 257 SLPFACFICRKPFVDP 272 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~P 272 (323)
..||.|.+|...|...
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2eop_A 10 EKPHECRECGKSFSFN 25 (46)
T ss_dssp CCSCBCTTTCCBCSSH
T ss_pred CCCeeCCCCCchhCCH
Confidence 4578999998888664
No 165
>2l4z_A DNA endonuclease RBBP8, LIM domain transcription LMO4; protein-protein interaction, LIM-interaction DOM LMO4, RBBP8/CTIP, LIM-only protein; HET: DNA; NMR {Homo sapiens}
Probab=28.29 E-value=32 Score=27.54 Aligned_cols=32 Identities=16% Similarity=0.321 Sum_probs=23.9
Q ss_pred CccccccccCCC---CcEEccCCCcccHHHHHHhc
Q 020671 259 PFACFICRKPFV---DPVVTKCKHYFCEHCALKHH 290 (323)
Q Consensus 259 p~~C~IC~e~~~---~PVvt~CGH~FC~~Ci~~~~ 290 (323)
=|.|..|...|. ......=|..||..|..+.+
T Consensus 88 CF~C~~C~~~L~~~g~~f~~~dg~~yC~~cy~~~F 122 (123)
T 2l4z_A 88 CLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLF 122 (123)
T ss_dssp TSBCTTTCCBGGGTTCCCBCSSSCCBCHHHHHHHC
T ss_pred ccCcCcCCCcccccCCceEEECCEEeCHHHhhhhc
Confidence 478889998885 34556667889999987654
No 166
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=28.05 E-value=24 Score=25.06 Aligned_cols=41 Identities=20% Similarity=0.426 Sum_probs=25.4
Q ss_pred ccccccccCCCCcEEc--cCCCcccHHHHHHhcc----CCCCCCCCCCC
Q 020671 260 FACFICRKPFVDPVVT--KCKHYFCEHCALKHHS----KNKKCFVCNEP 302 (323)
Q Consensus 260 ~~C~IC~e~~~~PVvt--~CGH~FC~~Ci~~~~~----~s~~CP~Cr~~ 302 (323)
..|.||...- -++. .|...|-..|+..-+. ....||.|...
T Consensus 10 ~~C~vC~~~g--~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 10 EFCRVCKDGG--ELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SSCTTTCCCS--SCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred CcCCCCCCCC--CEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCc
Confidence 3699998632 2221 4666677777764333 45789999654
No 167
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.83 E-value=52 Score=20.20 Aligned_cols=17 Identities=29% Similarity=0.731 Sum_probs=13.0
Q ss_pred CCCCccccccccCCCCc
Q 020671 256 DSLPFACFICRKPFVDP 272 (323)
Q Consensus 256 e~~p~~C~IC~e~~~~P 272 (323)
...+|.|.+|...|...
T Consensus 9 ~~k~~~C~~C~k~f~~~ 25 (46)
T 2ytt_A 9 GEKPYQCSECGKSFSGS 25 (46)
T ss_dssp CCCTTCCSSSCCCCSSH
T ss_pred CCCCeeCCCCCcccCCH
Confidence 34678999998888765
No 168
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=27.50 E-value=19 Score=38.10 Aligned_cols=42 Identities=31% Similarity=0.753 Sum_probs=30.6
Q ss_pred cccccccCCCCcE----------EccCCC--------------------cccHHHHHHhcc--------CCCCCCCCCCC
Q 020671 261 ACFICRKPFVDPV----------VTKCKH--------------------YFCEHCALKHHS--------KNKKCFVCNEP 302 (323)
Q Consensus 261 ~C~IC~e~~~~PV----------vt~CGH--------------------~FC~~Ci~~~~~--------~s~~CP~Cr~~ 302 (323)
.|+-|+.-+.+|- -|.||. .+|..|..++.. +...||.|+=.
T Consensus 113 ~C~~Cl~e~~dp~~Rry~ypF~nCt~CGPR~tii~~lPYDR~~TsM~~F~mC~~C~~EY~dp~~RRfhAqp~aC~~CGP~ 192 (761)
T 3vth_A 113 VCEDCLRELKDPKDRRYRYPFINCTNCGPRFSIIEDIPYDRAKTSMKVFPMCEKCSREYHDPHDRRFHAQPVACFDCGPS 192 (761)
T ss_dssp CCHHHHHHHTCTTSTTTTCTTCCBTTBBCSGGGBCSSSCCGGGBGGGGSCCCHHHHHHHTCTTSTTTTCTTCCCTTTSCC
T ss_pred ccHHHHHHhcCCCccccCCCcccCCCCCcchhhhccCCCCCCCCccccCCCCHHHHHHhcCcccccccCCCCcCCccCCe
Confidence 6888887776662 356763 259999999765 55789999754
No 169
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=27.16 E-value=73 Score=19.39 Aligned_cols=16 Identities=19% Similarity=0.436 Sum_probs=12.4
Q ss_pred CCCccccccccCCCCc
Q 020671 257 SLPFACFICRKPFVDP 272 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~P 272 (323)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2em0_A 10 EKTWKCRECDMCFSQA 25 (46)
T ss_dssp CCCCCCSSSCCCCSSH
T ss_pred CcCeECCCCCcccCCH
Confidence 4578999998887664
No 170
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.14 E-value=36 Score=23.54 Aligned_cols=50 Identities=20% Similarity=0.165 Sum_probs=29.7
Q ss_pred CCCccccccccCCCCcEEccCCCcccHHHHHHhc----cCCCCCCCCCCCCCCchhhHHHH
Q 020671 257 SLPFACFICRKPFVDPVVTKCKHYFCEHCALKHH----SKNKKCFVCNEPTLGIFNTALEI 313 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~----~~s~~CP~Cr~~t~gvfn~Ak~L 313 (323)
..||.|.+|...|.....+. .|. ..+. .....|+.|...+....++..++
T Consensus 5 ~k~~~C~~C~k~f~~~~~L~-~H~------~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~ 58 (78)
T 2d9h_A 5 SSGLQCEICGFTCRQKASLN-WHQ------RKHAETVAALRFPCEFCGKRFEKPDSVAAHR 58 (78)
T ss_dssp CCCEECSSSCCEESSHHHHH-HHH------HHHHHHTTTCCEECTTTCCEESSHHHHHHHH
T ss_pred CcCeECCCCCCeeCCHHHHH-HHH------HHhhccCCCcccCCCCCCchhCCHHHHHHHH
Confidence 46899999998886653221 121 1111 24578999988765555554444
No 171
>2cor_A Pinch protein; LIM domain, particularly interesting NEW Cys- His protein, LIM and senescent cell antigen-like domains 1, structural genomics; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=27.08 E-value=36 Score=24.71 Aligned_cols=31 Identities=23% Similarity=0.427 Sum_probs=18.2
Q ss_pred ccccccccCCCCcEEccCCCcccHHHHHHhc
Q 020671 260 FACFICRKPFVDPVVTKCKHYFCEHCALKHH 290 (323)
Q Consensus 260 ~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~ 290 (323)
|.|..|...|.......=+..||..|..+.+
T Consensus 42 F~C~~C~~~L~~~~f~~~g~~yC~~cy~~~f 72 (79)
T 2cor_A 42 FNCANCGKELTADARELKGELYCLPCHDKMG 72 (79)
T ss_dssp SBCSSSCCBCCTTCEEETTEEECHHHHHTTS
T ss_pred CEeCCCCCccCCCCEeECCEEeCHHHHHHhC
Confidence 5666776666433233445667777766544
No 172
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=26.86 E-value=1.2e+02 Score=22.99 Aligned_cols=40 Identities=20% Similarity=0.467 Sum_probs=26.5
Q ss_pred CCCCccccccccCCCC-cEEccCCCcccHHHHHHhccCCCCCCC
Q 020671 256 DSLPFACFICRKPFVD-PVVTKCKHYFCEHCALKHHSKNKKCFV 298 (323)
Q Consensus 256 e~~p~~C~IC~e~~~~-PVvt~CGH~FC~~Ci~~~~~~s~~CP~ 298 (323)
...+..|..|...+.- +..=.|+.+||.. .++...-.|+.
T Consensus 22 k~~~~RC~~C~kkvgL~~f~CrCg~~FCs~---HRy~e~H~C~f 62 (74)
T 1wfp_A 22 KSTATRCLSCNKKVGVTGFKCRCGSTFCGT---HRYPESHECQF 62 (74)
T ss_dssp TCCCCBCSSSCCBCTTTCEECTTSCEECTT---TCSTTTSCCCS
T ss_pred cccCccchhhcCcccccceEeccCCEeccc---cCCCcCCCCcC
Confidence 4456799999977543 4555899999984 33334445543
No 173
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=26.80 E-value=34 Score=25.29 Aligned_cols=33 Identities=21% Similarity=0.305 Sum_probs=23.4
Q ss_pred CccccccccCCCC-cEEccCCCcccHHHHHHhcc
Q 020671 259 PFACFICRKPFVD-PVVTKCKHYFCEHCALKHHS 291 (323)
Q Consensus 259 p~~C~IC~e~~~~-PVvt~CGH~FC~~Ci~~~~~ 291 (323)
=|.|..|...|.. .....=+..||..|..+.+.
T Consensus 51 CF~C~~C~~~L~~~~~~~~~g~~yC~~~y~~~f~ 84 (89)
T 1x64_A 51 CFVCADCNLNLKQKGYFFVEGELYCETHARARTS 84 (89)
T ss_dssp TCCCSSSCCCTTTSCCEEETTEEECHHHHHHHSS
T ss_pred CCEecCCCCCCCCCCeEeECCEEECHHHHHHHhC
Confidence 3678888888764 33444567899999887664
No 174
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=26.80 E-value=34 Score=26.59 Aligned_cols=39 Identities=21% Similarity=0.534 Sum_probs=26.5
Q ss_pred CCCccccccccCCC--CcEEccCCCcccHHHHHHhccCCCCCCC
Q 020671 257 SLPFACFICRKPFV--DPVVTKCKHYFCEHCALKHHSKNKKCFV 298 (323)
Q Consensus 257 ~~p~~C~IC~e~~~--~PVvt~CGH~FC~~Ci~~~~~~s~~CP~ 298 (323)
..+..|..|...+- .|..=.||..||.. .++...-.|+.
T Consensus 23 ~~~~rC~~C~kkvgl~~~f~CrCg~~FC~~---HRy~e~H~C~f 63 (85)
T 1wff_A 23 KIMKHCFLCGKKTGLATSFECRCGNNFCAS---HRYAEAHGCNY 63 (85)
T ss_dssp CCCCBCSSSCCBCSSSSCEECTTCCEECTT---TCSTGGGTCCS
T ss_pred ccCccchhhCCeecccCCeEcCCCCEeccc---CCCccCCCCcc
Confidence 34568999998764 37777899999984 33333445543
No 175
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.77 E-value=56 Score=19.90 Aligned_cols=16 Identities=31% Similarity=0.773 Sum_probs=12.6
Q ss_pred CCCccccccccCCCCc
Q 020671 257 SLPFACFICRKPFVDP 272 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~P 272 (323)
..|+.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytr_A 10 EKPYKCNECGKAFSQT 25 (46)
T ss_dssp CCTTCCTTTCCCCSSH
T ss_pred CcCcCCCCCCCccCCH
Confidence 4678999998888664
No 176
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.40 E-value=58 Score=19.96 Aligned_cols=16 Identities=31% Similarity=0.775 Sum_probs=12.7
Q ss_pred CCCccccccccCCCCc
Q 020671 257 SLPFACFICRKPFVDP 272 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~P 272 (323)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ytq_A 10 EKPYGCSECGKAFSSK 25 (46)
T ss_dssp CCSCBCSSSCCBCSCH
T ss_pred CCCcCCCccChhhCCh
Confidence 4678999999888764
No 177
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.36 E-value=76 Score=19.33 Aligned_cols=16 Identities=31% Similarity=0.727 Sum_probs=12.6
Q ss_pred CCCccccccccCCCCc
Q 020671 257 SLPFACFICRKPFVDP 272 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~P 272 (323)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2ytn_A 10 KKPYKCNECGKVFTQN 25 (46)
T ss_dssp CSSCBCTTTCCBCSSH
T ss_pred CcCeECCCCCCeeCCH
Confidence 4678999998888664
No 178
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=26.20 E-value=97 Score=23.41 Aligned_cols=37 Identities=27% Similarity=0.604 Sum_probs=24.4
Q ss_pred CCccccccccCCC-CcEEccCCCcccHHHHHHhccCCCCCC
Q 020671 258 LPFACFICRKPFV-DPVVTKCKHYFCEHCALKHHSKNKKCF 297 (323)
Q Consensus 258 ~p~~C~IC~e~~~-~PVvt~CGH~FC~~Ci~~~~~~s~~CP 297 (323)
.+..|..|...+- -+..=.||..||.. .++...-.|+
T Consensus 24 ~~nRC~~CrKkvgL~gf~CrCg~~FCs~---HRy~e~H~C~ 61 (74)
T 1wfl_A 24 KKNRCFMCRKKVGLTGFDCRCGNLFCGL---HRYSDKHNCP 61 (74)
T ss_dssp CTTBCSSSCCBCGGGCEECTTSCEECSS---SCSTTTTTCC
T ss_pred cCCcChhhCCcccccCeecCCCCEechh---cCCCccCCCc
Confidence 4568999998643 35555799999984 3333444554
No 179
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.19 E-value=58 Score=19.91 Aligned_cols=16 Identities=44% Similarity=0.931 Sum_probs=12.6
Q ss_pred CCCccccccccCCCCc
Q 020671 257 SLPFACFICRKPFVDP 272 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~P 272 (323)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2epz_A 10 EKPFDCIDCGKAFSDH 25 (46)
T ss_dssp CCSBCCTTTCCCBSSH
T ss_pred CCCeECCCCCceeCCH
Confidence 4578999998888664
No 180
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=26.14 E-value=36 Score=23.51 Aligned_cols=33 Identities=24% Similarity=0.492 Sum_probs=21.8
Q ss_pred CccccccccCCCC-cEEccCCCcccHHHHHHhcc
Q 020671 259 PFACFICRKPFVD-PVVTKCKHYFCEHCALKHHS 291 (323)
Q Consensus 259 p~~C~IC~e~~~~-PVvt~CGH~FC~~Ci~~~~~ 291 (323)
=|.|..|...+.. .....=+..||..|..+.+.
T Consensus 31 CF~C~~C~~~L~~~~~~~~~g~~yC~~~y~~~f~ 64 (66)
T 1nyp_A 31 HFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFG 64 (66)
T ss_dssp TCBCTTTCCBCSSSCCEEETTEEECHHHHHHHCS
T ss_pred cCEECCCCCCCCCCceEeECCcEECHHHHHHHhC
Confidence 3677788877754 23445567788888876553
No 181
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=26.04 E-value=27 Score=26.14 Aligned_cols=46 Identities=15% Similarity=0.233 Sum_probs=28.6
Q ss_pred CCCccccccccCCCCcEEccCCCcccHHHHHHhcc-----CCCCCCCCCCCCCCchhhHHHH
Q 020671 257 SLPFACFICRKPFVDPVVTKCKHYFCEHCALKHHS-----KNKKCFVCNEPTLGIFNTALEI 313 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~-----~s~~CP~Cr~~t~gvfn~Ak~L 313 (323)
..++.|++|...|..... +..+.. ....|+.|.+.+....++..++
T Consensus 26 ~~~h~C~~Cgk~F~~~~~-----------L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~ 76 (85)
T 2lv2_A 26 AECHLCPVCGESFASKGA-----------QERHLRLLHAAQVFPCKYCPATFYSSPGLTRHI 76 (85)
T ss_dssp CTTEECTTSCCEESSHHH-----------HHHHHHTTSCSSSEECTTSSCEESSHHHHHHHH
T ss_pred CCCEECCCCCCCcCcHHH-----------HhhhhhhccCCCccCCCCCCCEeCCHHHHHHhC
Confidence 446789998888765422 222221 4578999988766555555554
No 182
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=26.01 E-value=29 Score=23.14 Aligned_cols=50 Identities=16% Similarity=0.307 Sum_probs=28.6
Q ss_pred CCCccccccccCCCCcEEccCCCcccHHHHHH-h--ccCCCCCCCCCCCCCCchhhHHHH
Q 020671 257 SLPFACFICRKPFVDPVVTKCKHYFCEHCALK-H--HSKNKKCFVCNEPTLGIFNTALEI 313 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~-~--~~~s~~CP~Cr~~t~gvfn~Ak~L 313 (323)
..|+.|.+|...|.....+. .| ... + -.....|+.|+..+....++..++
T Consensus 8 ~k~~~C~~C~k~f~~~~~l~-~H------~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~ 60 (66)
T 2drp_A 8 EHTYRCKVCSRVYTHISNFC-RH------YVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60 (66)
T ss_dssp TTEEECTTTCCEESSHHHHH-HH------HHHHSSSSCCCEECTTTCCEESCHHHHHHHH
T ss_pred CcceECCCCcchhCCHHHHH-HH------HHHHcCCCCcCeECCCCCCccCCHHHHHHHH
Confidence 46889999998876643221 01 011 1 114568999988765544444443
No 183
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=25.96 E-value=65 Score=23.65 Aligned_cols=17 Identities=12% Similarity=0.466 Sum_probs=13.5
Q ss_pred CCCCccccccccCCCCc
Q 020671 256 DSLPFACFICRKPFVDP 272 (323)
Q Consensus 256 e~~p~~C~IC~e~~~~P 272 (323)
...+|.|.+|...|...
T Consensus 13 ~~~~~~C~~C~~~f~~~ 29 (107)
T 1wjp_A 13 NKEVYQCRLCNAKLSSL 29 (107)
T ss_dssp CCCCCBCTTTCCBCSSH
T ss_pred CCcCeECCCCCCccCCH
Confidence 34689999999988655
No 184
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.85 E-value=82 Score=19.23 Aligned_cols=16 Identities=25% Similarity=0.584 Sum_probs=12.6
Q ss_pred CCCccccccccCCCCc
Q 020671 257 SLPFACFICRKPFVDP 272 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~P 272 (323)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2elz_A 10 EKPYKCEDCGKGYNRR 25 (46)
T ss_dssp CSSCBCSSSCCBCSSH
T ss_pred CCCeeCcccCchhCCH
Confidence 4578999999888654
No 185
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.67 E-value=35 Score=23.87 Aligned_cols=33 Identities=21% Similarity=0.578 Sum_probs=23.0
Q ss_pred CccccccccCCCCc-EEccCCCcccHHHHHHhcc
Q 020671 259 PFACFICRKPFVDP-VVTKCKHYFCEHCALKHHS 291 (323)
Q Consensus 259 p~~C~IC~e~~~~P-Vvt~CGH~FC~~Ci~~~~~ 291 (323)
=|.|..|...|... ....=+..||..|..+.+.
T Consensus 31 CF~C~~C~~~L~~~~f~~~~g~~yC~~c~~~~~~ 64 (70)
T 2d8x_A 31 CFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKA 64 (70)
T ss_dssp TSBCSSSCCBCSSSCCEEETTEEECHHHHHHHHC
T ss_pred CCEeCCCCCcCCCCccEeECCeEECHHHhhhhcC
Confidence 36788888877543 2335577889999887664
No 186
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.38 E-value=52 Score=22.85 Aligned_cols=33 Identities=21% Similarity=0.511 Sum_probs=23.4
Q ss_pred CccccccccCCCC-cEEccCCCcccHHHHHHhcc
Q 020671 259 PFACFICRKPFVD-PVVTKCKHYFCEHCALKHHS 291 (323)
Q Consensus 259 p~~C~IC~e~~~~-PVvt~CGH~FC~~Ci~~~~~ 291 (323)
=|.|..|...|.. +....=+..||..|..+.+.
T Consensus 31 CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~~f~ 64 (70)
T 2d8z_A 31 CFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYA 64 (70)
T ss_dssp TSBCSSSCCBCTTSCCEESSSSEECHHHHHHHTC
T ss_pred CCccCCCCCcCCcCceEeeCCeEECHHHHHHHhc
Confidence 3678888888754 33345577899999987664
No 187
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.15 E-value=49 Score=20.27 Aligned_cols=17 Identities=35% Similarity=0.712 Sum_probs=13.5
Q ss_pred CCCccccccccCCCCcE
Q 020671 257 SLPFACFICRKPFVDPV 273 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~PV 273 (323)
..||.|.+|...|....
T Consensus 10 ~~~~~C~~C~k~f~~~~ 26 (46)
T 2ytg_A 10 EKPFKCGECGKSYNQRV 26 (46)
T ss_dssp CCSEECTTTCCEESSSH
T ss_pred CCCeECCCCCcccCCHH
Confidence 46899999998887653
No 188
>1j2o_A FLIN2, fusion of rhombotin-2 and LIM domain-binding protein 1; LIM-interaction-domain (LID), metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=25.09 E-value=51 Score=25.61 Aligned_cols=39 Identities=13% Similarity=0.210 Sum_probs=28.2
Q ss_pred CccccccccCCCC---cEEccCCCcccHHHHHHhccCCCCCCCC
Q 020671 259 PFACFICRKPFVD---PVVTKCKHYFCEHCALKHHSKNKKCFVC 299 (323)
Q Consensus 259 p~~C~IC~e~~~~---PVvt~CGH~FC~~Ci~~~~~~s~~CP~C 299 (323)
-|.|..|...|.. +....=|..||..|..+.+. .+|..|
T Consensus 30 CF~C~~C~~~L~~~g~~~~~~~g~~yC~~~y~~~f~--~~c~~c 71 (114)
T 1j2o_A 30 CLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLGG--SGGHMG 71 (114)
T ss_dssp TCCCSSSCSCCCCSSSCCCCBTTBCCCHHHHHHHHT--SCCSSC
T ss_pred cCcccccCCchhcCCCeeEEECCeeechHHHHHHhC--cccCcC
Confidence 4788899998863 44455678899999988876 345444
No 189
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=24.66 E-value=29 Score=18.59 Aligned_cols=10 Identities=40% Similarity=1.301 Sum_probs=4.4
Q ss_pred ccccccccCC
Q 020671 260 FACFICRKPF 269 (323)
Q Consensus 260 ~~C~IC~e~~ 269 (323)
+.|.+|...|
T Consensus 3 ~~C~~C~~~f 12 (29)
T 1ard_A 3 FVCEVCTRAF 12 (29)
T ss_dssp CBCTTTCCBC
T ss_pred eECCCCCccc
Confidence 4444444443
No 190
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=24.58 E-value=47 Score=23.17 Aligned_cols=32 Identities=22% Similarity=0.525 Sum_probs=22.9
Q ss_pred ccccccccCCCC-cEEccCCCcccHHHHHHhcc
Q 020671 260 FACFICRKPFVD-PVVTKCKHYFCEHCALKHHS 291 (323)
Q Consensus 260 ~~C~IC~e~~~~-PVvt~CGH~FC~~Ci~~~~~ 291 (323)
|.|..|...+.. +....=+..||..|..+.+.
T Consensus 34 F~C~~C~~~L~~~~~~~~~~~~yC~~cy~~~f~ 66 (72)
T 1wyh_A 34 FLCSGCEQPLGSRSFVPDKGAHYCVPCYENKFA 66 (72)
T ss_dssp CBCTTTCCBTTTSCEEEETTEEEEHHHHHHHTS
T ss_pred CeECCCCCcCCCCccCCcCCeEECHHHHHHHcc
Confidence 678888887764 34445577889999887654
No 191
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=24.18 E-value=25 Score=18.62 Aligned_cols=11 Identities=36% Similarity=1.186 Sum_probs=5.3
Q ss_pred ccccccccCCC
Q 020671 260 FACFICRKPFV 270 (323)
Q Consensus 260 ~~C~IC~e~~~ 270 (323)
+.|.+|...|.
T Consensus 2 ~~C~~C~k~f~ 12 (27)
T 1znf_A 2 YKCGLCERSFV 12 (27)
T ss_dssp CBCSSSCCBCS
T ss_pred ccCCCCCCcCC
Confidence 44555554443
No 192
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=24.15 E-value=40 Score=23.41 Aligned_cols=16 Identities=38% Similarity=0.823 Sum_probs=12.5
Q ss_pred CCCccccccccCCCCc
Q 020671 257 SLPFACFICRKPFVDP 272 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~P 272 (323)
..||.|.+|...|...
T Consensus 13 ~k~~~C~~C~~~f~~~ 28 (86)
T 1x6h_A 13 EKPYACSHCDKTFRQK 28 (86)
T ss_dssp CCCEECSSSSCEESSH
T ss_pred CCCCcCCCCCCccCCH
Confidence 4689999998887654
No 193
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.01 E-value=43 Score=22.38 Aligned_cols=33 Identities=21% Similarity=0.419 Sum_probs=19.9
Q ss_pred CCCccccccccCCCCcEEc-cCCCcccHHHHHHh
Q 020671 257 SLPFACFICRKPFVDPVVT-KCKHYFCEHCALKH 289 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~PVvt-~CGH~FC~~Ci~~~ 289 (323)
..|+.|.+|...|.....+ .=..+-|..|-..+
T Consensus 16 ~~~~~C~~C~k~f~~~~~l~~~~~~~C~~C~~~f 49 (73)
T 2ctu_A 16 DRSQKCSKCGIIFIRRSTLSRRKTPMCEKCRKDS 49 (73)
T ss_dssp CSEEECSSSCCEEECCCCCCCSSSCCCHHHHHTC
T ss_pred CCCeeCCcccchhCCHHHhCcCCCCCCCCCChhh
Confidence 4678999998888554322 21234566665543
No 194
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=23.94 E-value=61 Score=19.73 Aligned_cols=16 Identities=31% Similarity=0.677 Sum_probs=12.2
Q ss_pred CCCccccccccCCCCc
Q 020671 257 SLPFACFICRKPFVDP 272 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~P 272 (323)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2el4_A 10 VKPYGCSQCAKTFSLK 25 (46)
T ss_dssp CCSEECSSSSCEESSH
T ss_pred CCceECCCCCchhCCH
Confidence 4678999988877654
No 195
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.93 E-value=56 Score=24.12 Aligned_cols=33 Identities=24% Similarity=0.550 Sum_probs=23.7
Q ss_pred CccccccccCCCC-cEEccCCCcccHHHHHHhcc
Q 020671 259 PFACFICRKPFVD-PVVTKCKHYFCEHCALKHHS 291 (323)
Q Consensus 259 p~~C~IC~e~~~~-PVvt~CGH~FC~~Ci~~~~~ 291 (323)
-|.|..|...|.. .....=+..||..|..+.+.
T Consensus 51 CF~C~~C~~~L~~~~f~~~~g~~yC~~cy~~~f~ 84 (90)
T 2dar_A 51 EFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFA 84 (90)
T ss_dssp TCBCSSSCCBCSSSCBEESSSCEECHHHHHHHTS
T ss_pred CCccCCCCCCCCCCEeEeECCEEECHHHHHHHcC
Confidence 4678888888764 23445577899999887764
No 196
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=23.84 E-value=63 Score=24.09 Aligned_cols=48 Identities=15% Similarity=0.166 Sum_probs=29.2
Q ss_pred CCccccccccCC-CCcEEccCCCcccHHHHHHhccCCCCCCCCCCCCCCchhhHHH
Q 020671 258 LPFACFICRKPF-VDPVVTKCKHYFCEHCALKHHSKNKKCFVCNEPTLGIFNTALE 312 (323)
Q Consensus 258 ~p~~C~IC~e~~-~~PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~gvfn~Ak~ 312 (323)
.++.|.+|...| .....+. .| +..+-.....|..|++.+....++..+
T Consensus 33 ~~~~C~~C~k~F~~~~~~L~-~H------~~~h~~k~~~C~~Cgk~F~~~~~L~~H 81 (96)
T 2ctd_A 33 GSVSCPTCQAVGRKTIEGLK-KH------MENCKQEMFTCHHCGKQLRSLAGMKYH 81 (96)
T ss_dssp SCEECTTTCSCEESSHHHHH-HH------HHHHCCCCCCCSSSCCCCSSHHHHHHH
T ss_pred CCcCCCCCCCCcccCHHHHH-HH------HHHHCCCCeECCCCCCeeCCHHHHHHH
Confidence 478999998887 5542221 11 111112567899999887666666555
No 197
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.76 E-value=70 Score=23.62 Aligned_cols=37 Identities=14% Similarity=0.204 Sum_probs=25.7
Q ss_pred CccccccccCCCCc-EEccCCCcccHHHHHHhccCCCCCC
Q 020671 259 PFACFICRKPFVDP-VVTKCKHYFCEHCALKHHSKNKKCF 297 (323)
Q Consensus 259 p~~C~IC~e~~~~P-Vvt~CGH~FC~~Ci~~~~~~s~~CP 297 (323)
=|.|..|...|... ....=+..||..|..+.+. .+|.
T Consensus 42 CF~C~~C~~~L~~~~~~~~~g~~yC~~~y~~~f~--~kc~ 79 (91)
T 2d8y_A 42 CFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFK--SKGN 79 (91)
T ss_dssp TCBCTTTCCBCCTTTCCCSSSCCCCHHHHHHHSC--CCSC
T ss_pred CCeeCCCCCCCCCCCcEeECCEEECHHHHHHHhC--CCcC
Confidence 36788888877643 3445567899999987765 4454
No 198
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=23.73 E-value=60 Score=24.68 Aligned_cols=48 Identities=25% Similarity=0.436 Sum_probs=28.9
Q ss_pred CCccccccccCCCCcEEccCCCcccHHHHHHhccCCCCCCCCCCCCCCchhhHHHH
Q 020671 258 LPFACFICRKPFVDPVVTKCKHYFCEHCALKHHSKNKKCFVCNEPTLGIFNTALEI 313 (323)
Q Consensus 258 ~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~gvfn~Ak~L 313 (323)
.|+.|.+|...|.....+. .|. ..+ .....|+.|++.+....++..++
T Consensus 73 ~~~~C~~C~k~f~~~~~l~-~H~------~~H-~~~~~C~~C~k~f~~~~~l~~H~ 120 (129)
T 2wbt_A 73 SQFVCPLCLMPFSSSVSLK-QHI------RYT-EHTKVCPVCKKEFTSTDSALDHV 120 (129)
T ss_dssp CSEECTTTCCEESSHHHHH-HHH------HHT-CCCCBCTTTCCBCSSHHHHHHHH
T ss_pred CCeECCCCCcccCCHhHHH-HHH------HHC-CCCCCCCCCCcccCCHHHHHHHH
Confidence 5789999988876543221 110 011 34578999988766555555443
No 199
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=23.15 E-value=25 Score=28.16 Aligned_cols=57 Identities=18% Similarity=0.452 Sum_probs=30.2
Q ss_pred CCCccccccccCCCCcE----------------EccCCCcccHHHH-HHhcc-----CCCCCCCCCCCCCCchhhHHHH
Q 020671 257 SLPFACFICRKPFVDPV----------------VTKCKHYFCEHCA-LKHHS-----KNKKCFVCNEPTLGIFNTALEI 313 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~PV----------------vt~CGH~FC~~Ci-~~~~~-----~s~~CP~Cr~~t~gvfn~Ak~L 313 (323)
+.+|.|.+|...|.... -..|+-.|-..-. ..+.. ....|+.|+..+....++..++
T Consensus 20 ek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~ 98 (133)
T 2lt7_A 20 RVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHI 98 (133)
T ss_dssp EEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHH
T ss_pred CcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHh
Confidence 35788888888874431 1234444433222 22221 3467888877655444444443
No 200
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=23.09 E-value=44 Score=23.84 Aligned_cols=33 Identities=12% Similarity=0.310 Sum_probs=22.4
Q ss_pred CccccccccCCC--CcEEccCCCcccHHHHHHhcc
Q 020671 259 PFACFICRKPFV--DPVVTKCKHYFCEHCALKHHS 291 (323)
Q Consensus 259 p~~C~IC~e~~~--~PVvt~CGH~FC~~Ci~~~~~ 291 (323)
-|.|..|...|. ......=+..||..|....+.
T Consensus 31 CF~C~~C~~~L~~~~~f~~~~~~~yC~~C~~~~~~ 65 (73)
T 1wig_A 31 CALCVRCGQMFAEGEEMYLQGSSIWHPACRQAART 65 (73)
T ss_dssp TSCCSSSCCCCCSSCCCEEETTEEECTTHHHHTSS
T ss_pred cCEeCCCCCCCCCCCeeEeeCCEEEChHHChHhhc
Confidence 367888888775 233444567788888877654
No 201
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.01 E-value=50 Score=20.24 Aligned_cols=16 Identities=31% Similarity=0.877 Sum_probs=12.3
Q ss_pred CCCccccccccCCCCc
Q 020671 257 SLPFACFICRKPFVDP 272 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~P 272 (323)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eml_A 10 EKPYECSVCGKAFSHR 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeeCCCcCCccCCH
Confidence 4678999998877654
No 202
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=22.98 E-value=23 Score=25.62 Aligned_cols=42 Identities=24% Similarity=0.502 Sum_probs=22.9
Q ss_pred CccccccccCCCCc-EEccCCCcccHHHHHHhccCCCCCCCCCCC
Q 020671 259 PFACFICRKPFVDP-VVTKCKHYFCEHCALKHHSKNKKCFVCNEP 302 (323)
Q Consensus 259 p~~C~IC~e~~~~P-Vvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~ 302 (323)
=|.|..|...+... ....=+..||..|..+.+. ++|.-|...
T Consensus 34 CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~~f~--~~c~gcg~g 76 (81)
T 1a7i_A 34 CFLCMVCRKNLDSTTVAIHDAEVYCKSCYGKKYG--PKGYGYGQG 76 (81)
T ss_dssp SEECSSSCCEECSSCCEEETTEEECSHHHHHHCC-----------
T ss_pred cCccCCCCCCCCCCCeEeeCCEEECHHHHHHHhC--CcccccCCc
Confidence 36788888877543 3344567899999987654 677777543
No 203
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=22.84 E-value=36 Score=18.18 Aligned_cols=10 Identities=20% Similarity=0.600 Sum_probs=4.4
Q ss_pred ccccccccCC
Q 020671 260 FACFICRKPF 269 (323)
Q Consensus 260 ~~C~IC~e~~ 269 (323)
+.|.+|...|
T Consensus 3 ~~C~~C~k~f 12 (30)
T 1klr_A 3 YQCQYCEFRS 12 (30)
T ss_dssp CCCSSSSCCC
T ss_pred ccCCCCCCcc
Confidence 3444444444
No 204
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=22.72 E-value=25 Score=37.21 Aligned_cols=22 Identities=23% Similarity=0.717 Sum_probs=17.6
Q ss_pred ccHHHHHHhcc--------CCCCCCCCCCC
Q 020671 281 FCEHCALKHHS--------KNKKCFVCNEP 302 (323)
Q Consensus 281 FC~~Ci~~~~~--------~s~~CP~Cr~~ 302 (323)
+|..|..++.. +...||.|+=.
T Consensus 158 mC~~C~~EY~dp~dRRfhAqp~aC~~CGP~ 187 (772)
T 4g9i_A 158 MCDFCRSEYEDPLNRRYHAEPTACPVCGPS 187 (772)
T ss_dssp CCHHHHHHHHCSSSTTTTCTTCCCTTTSCC
T ss_pred CChhHHHHhCCCCCCCCcCCCCCCccCCce
Confidence 59999998854 56789999753
No 205
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=22.71 E-value=32 Score=19.96 Aligned_cols=16 Identities=31% Similarity=0.725 Sum_probs=11.6
Q ss_pred CCCccccccccCCCCc
Q 020671 257 SLPFACFICRKPFVDP 272 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~P 272 (323)
..|+.|.+|...|..+
T Consensus 9 ~k~~~C~~C~k~f~~~ 24 (37)
T 1p7a_A 9 IKPFQCPDCDRSFSRS 24 (37)
T ss_dssp SSSBCCTTTCCCBSSH
T ss_pred CCCccCCCCCcccCcH
Confidence 3578898888877653
No 206
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=22.03 E-value=11 Score=30.23 Aligned_cols=40 Identities=20% Similarity=0.448 Sum_probs=27.5
Q ss_pred CccccccccCCCCcEEccCCCcccHHHHHHhccCCCCCCCCCCCC
Q 020671 259 PFACFICRKPFVDPVVTKCKHYFCEHCALKHHSKNKKCFVCNEPT 303 (323)
Q Consensus 259 p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t 303 (323)
...||+|...+. ..=++++|..|-.. +.....||.|.++.
T Consensus 32 ~~~CP~Cq~eL~----~~g~~~hC~~C~~~-f~~~a~CPdC~q~L 71 (101)
T 2jne_A 32 ELHCPQCQHVLD----QDNGHARCRSCGEF-IEMKALCPDCHQPL 71 (101)
T ss_dssp CCBCSSSCSBEE----EETTEEEETTTCCE-EEEEEECTTTCSBC
T ss_pred cccCccCCCcce----ecCCEEECccccch-hhccccCcchhhHH
Confidence 368999998643 12245559998764 44568899998864
No 207
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=22.02 E-value=36 Score=18.38 Aligned_cols=13 Identities=31% Similarity=0.984 Sum_probs=7.1
Q ss_pred CccccccccCCCC
Q 020671 259 PFACFICRKPFVD 271 (323)
Q Consensus 259 p~~C~IC~e~~~~ 271 (323)
|+.|.+|...|..
T Consensus 2 ~~~C~~C~k~f~~ 14 (30)
T 1paa_A 2 AYACGLCNRAFTR 14 (30)
T ss_dssp CSBCTTTCCBCSS
T ss_pred CcCCcccCcccCC
Confidence 4556666555543
No 208
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=27.55 E-value=19 Score=19.20 Aligned_cols=14 Identities=43% Similarity=1.011 Sum_probs=8.7
Q ss_pred CccccccccCCCCc
Q 020671 259 PFACFICRKPFVDP 272 (323)
Q Consensus 259 p~~C~IC~e~~~~P 272 (323)
|+.|.+|...|...
T Consensus 2 p~~C~~C~k~f~~~ 15 (26)
T 2lvu_A 2 PYVCERCGKRFVQS 15 (26)
Confidence 56677777666543
No 209
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.86 E-value=53 Score=20.04 Aligned_cols=16 Identities=31% Similarity=0.729 Sum_probs=12.6
Q ss_pred CCCccccccccCCCCc
Q 020671 257 SLPFACFICRKPFVDP 272 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~P 272 (323)
..||.|.+|...|...
T Consensus 10 ~~~~~C~~C~k~F~~~ 25 (46)
T 2eoe_A 10 EKPYKCNECGKVFTQN 25 (46)
T ss_dssp CCSSEETTTTEECSSH
T ss_pred CCCeECCCcChhhCCH
Confidence 4678999998887654
No 210
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=21.78 E-value=80 Score=23.22 Aligned_cols=19 Identities=11% Similarity=0.097 Sum_probs=9.3
Q ss_pred CCCCCCCCCCCCchhhHHH
Q 020671 294 KKCFVCNEPTLGIFNTALE 312 (323)
Q Consensus 294 ~~CP~Cr~~t~gvfn~Ak~ 312 (323)
..|+.|...+....++..+
T Consensus 67 ~~C~~C~~~f~~~~~l~~H 85 (119)
T 2jp9_A 67 FQCKTCQRKFSRSDHLKTH 85 (119)
T ss_dssp EECTTTCCEESCHHHHHHH
T ss_pred ccCCccCchhCCHHHHHHH
Confidence 4566665554443333333
No 211
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=21.78 E-value=60 Score=19.78 Aligned_cols=16 Identities=31% Similarity=0.630 Sum_probs=12.3
Q ss_pred CCCccccccccCCCCc
Q 020671 257 SLPFACFICRKPFVDP 272 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~P 272 (323)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2em9_A 10 EKPYNCKECGKSFRWA 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CcCeECCccccccCCh
Confidence 4688999998887654
No 212
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.77 E-value=44 Score=23.64 Aligned_cols=31 Identities=23% Similarity=0.381 Sum_probs=17.0
Q ss_pred ccccccccCCCC-cEEccCCCcccHHHHHHhc
Q 020671 260 FACFICRKPFVD-PVVTKCKHYFCEHCALKHH 290 (323)
Q Consensus 260 ~~C~IC~e~~~~-PVvt~CGH~FC~~Ci~~~~ 290 (323)
|.|..|...+.. +....=|..||..|..+.+
T Consensus 40 F~C~~C~~~L~~~~~~~~~g~~yC~~~y~~~f 71 (77)
T 1g47_A 40 FVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLF 71 (77)
T ss_dssp CCCTTTCCCCGGGCSEEETTEEECHHHHHHHC
T ss_pred CeECCCCCCCCCCCeEeECCeEeCHHHHHHHh
Confidence 456666666543 2233345566777766554
No 213
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=21.77 E-value=10 Score=29.21 Aligned_cols=39 Identities=23% Similarity=0.594 Sum_probs=20.0
Q ss_pred ccccccccCCCCcEEccCCCcccHHHHHHhccCCCCCCCCCCCC
Q 020671 260 FACFICRKPFVDPVVTKCKHYFCEHCALKHHSKNKKCFVCNEPT 303 (323)
Q Consensus 260 ~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t 303 (323)
..||+|...+.. .=++.+|..|-..+.. ...||-|+++.
T Consensus 3 ~~CP~C~~~l~~----~~~~~~C~~C~~~~~~-~afCPeCgq~L 41 (81)
T 2jrp_A 3 ITCPVCHHALER----NGDTAHCETCAKDFSL-QALCPDCRQPL 41 (81)
T ss_dssp CCCSSSCSCCEE----CSSEEECTTTCCEEEE-EEECSSSCSCC
T ss_pred CCCCCCCCcccc----CCCceECccccccCCC-cccCcchhhHH
Confidence 457777765421 1123346666544333 23666666653
No 214
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=21.72 E-value=30 Score=29.34 Aligned_cols=43 Identities=21% Similarity=0.621 Sum_probs=29.6
Q ss_pred CccccccccCCC---Cc--EEccCCCcccHHHHHHhcc-CCCCCCCCCC
Q 020671 259 PFACFICRKPFV---DP--VVTKCKHYFCEHCALKHHS-KNKKCFVCNE 301 (323)
Q Consensus 259 p~~C~IC~e~~~---~P--Vvt~CGH~FC~~Ci~~~~~-~s~~CP~Cr~ 301 (323)
.-.|.+|..+|. ++ +-..|.|.+|..|-..... ....|-+|.+
T Consensus 68 ~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~~~~~~~~W~C~vC~k 116 (153)
T 2zet_C 68 ETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSHAHPEEQGWLCDPCHL 116 (153)
T ss_dssp GTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEECCSSSSSCEEHHHHH
T ss_pred CccchhhcCccccccCCCCcCCCCCchhhcccccccCCCCcEeeHHHHH
Confidence 347999999862 22 3457999999999842211 4577888855
No 215
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.55 E-value=61 Score=19.81 Aligned_cols=16 Identities=31% Similarity=0.696 Sum_probs=12.4
Q ss_pred CCCccccccccCCCCc
Q 020671 257 SLPFACFICRKPFVDP 272 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~P 272 (323)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2em7_A 10 EKPYKCEECGKGFICR 25 (46)
T ss_dssp CCSEECSSSCCEESCH
T ss_pred CcCccCCCccchhCCH
Confidence 4578999998887654
No 216
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.49 E-value=47 Score=23.27 Aligned_cols=33 Identities=21% Similarity=0.499 Sum_probs=23.0
Q ss_pred CccccccccCCCCc-EEccCCCcccHHHHHHhcc
Q 020671 259 PFACFICRKPFVDP-VVTKCKHYFCEHCALKHHS 291 (323)
Q Consensus 259 p~~C~IC~e~~~~P-Vvt~CGH~FC~~Ci~~~~~ 291 (323)
=|.|..|...+... ....=+..||..|..+.+.
T Consensus 35 CF~C~~C~~~L~~~~f~~~~g~~yC~~c~~~~~~ 68 (72)
T 1x4l_A 35 CFNCKKCSLSLVGRGFLTERDDILCPDCGKDISG 68 (72)
T ss_dssp TCBCSSSCCBCTTSCCEECSSSEECHHHHHTCCC
T ss_pred cCEeccCCCcCCCCccEeECCEEEChhHcCcccC
Confidence 36788888877543 3345678899999876553
No 217
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=21.45 E-value=1e+02 Score=22.61 Aligned_cols=39 Identities=23% Similarity=0.514 Sum_probs=26.1
Q ss_pred CCCCccccccccCCCC-cEEccCCCcccHHHHHHhccCCCCCC
Q 020671 256 DSLPFACFICRKPFVD-PVVTKCKHYFCEHCALKHHSKNKKCF 297 (323)
Q Consensus 256 e~~p~~C~IC~e~~~~-PVvt~CGH~FC~~Ci~~~~~~s~~CP 297 (323)
...+..|..|...+.- +..=.||.+||.. .++...-.|+
T Consensus 12 k~~~~rC~~C~kkvgl~~f~CrCg~~FC~~---HRy~e~H~C~ 51 (64)
T 1wfh_A 12 PQRPNRCTVCRKRVGLTGFMCRCGTTFCGS---HRYPEVHGCT 51 (64)
T ss_dssp CSSCCCCTTTCCCCCTTCEECSSSCEECTT---TCSTTTTTCC
T ss_pred CCcCCcChhhCCccCccCEEeecCCEeccc---cCCcccCCCC
Confidence 3456799999997543 4555899999984 3333444554
No 218
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.44 E-value=54 Score=19.99 Aligned_cols=16 Identities=31% Similarity=0.652 Sum_probs=12.3
Q ss_pred CCCccccccccCCCCc
Q 020671 257 SLPFACFICRKPFVDP 272 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~P 272 (323)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2eme_A 10 EKPYVCDYCGKAFGLS 25 (46)
T ss_dssp CCSEECSSSCCEESSH
T ss_pred CCCeECCCCChhhCCH
Confidence 4578999998887654
No 219
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.28 E-value=56 Score=20.00 Aligned_cols=16 Identities=31% Similarity=0.725 Sum_probs=12.3
Q ss_pred CCCccccccccCCCCc
Q 020671 257 SLPFACFICRKPFVDP 272 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~P 272 (323)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2eq0_A 10 EKPYKCHECGKVFRRN 25 (46)
T ss_dssp CCCEECTTTCCEESSH
T ss_pred CCCeECCCCCchhCCH
Confidence 4678999998877654
No 220
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.27 E-value=68 Score=22.20 Aligned_cols=33 Identities=24% Similarity=0.602 Sum_probs=23.8
Q ss_pred CccccccccCCCCc-EEccCCCcccHHHHHHhcc
Q 020671 259 PFACFICRKPFVDP-VVTKCKHYFCEHCALKHHS 291 (323)
Q Consensus 259 p~~C~IC~e~~~~P-Vvt~CGH~FC~~Ci~~~~~ 291 (323)
=|.|..|...+... ....=+..||..|..+.+.
T Consensus 31 CF~C~~C~~~L~~~~~~~~~~~~yC~~cy~~~f~ 64 (69)
T 2cur_A 31 CFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVS 64 (69)
T ss_dssp TTBCTTTCCBCTTSCEEECSSCEEEHHHHHHHHT
T ss_pred cCEECCCCCCCCCCccEeECCEEECHHHhHHHhc
Confidence 36788888887543 3445578899999887664
No 221
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.25 E-value=80 Score=19.27 Aligned_cols=16 Identities=31% Similarity=0.644 Sum_probs=12.4
Q ss_pred CCCccccccccCCCCc
Q 020671 257 SLPFACFICRKPFVDP 272 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~P 272 (323)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2emf_A 10 GKHFECTECGKAFTRK 25 (46)
T ss_dssp SCCEECSSSCCEESCH
T ss_pred CCCeECCCCCchhCCH
Confidence 4678999998887654
No 222
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=21.07 E-value=43 Score=23.45 Aligned_cols=49 Identities=20% Similarity=0.321 Sum_probs=26.4
Q ss_pred CCccccccccCCCCcEEccCCCcccHHHHHHhccCCCCCCCCCCCCCCchhhHHH
Q 020671 258 LPFACFICRKPFVDPVVTKCKHYFCEHCALKHHSKNKKCFVCNEPTLGIFNTALE 312 (323)
Q Consensus 258 ~p~~C~IC~e~~~~PVvt~CGH~FC~~Ci~~~~~~s~~CP~Cr~~t~gvfn~Ak~ 312 (323)
.++.|.+|...|.....+. .|. ....-.....|+.|+..+....++..+
T Consensus 33 ~~~~C~~C~~~f~~~~~l~-~H~-----~~h~~~~~~~C~~C~~~f~~~~~l~~H 81 (90)
T 1a1h_A 33 KPFQCRICMRNFSRSDHLT-THI-----RTHTGEKPFACDICGRKFARSDERKRH 81 (90)
T ss_dssp CCEECTTTCCEESCHHHHH-HHH-----HHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred CCccCCCCCcccCCHHHHH-HHH-----HHcCCCCCccCCCCCchhCCHHHHHHH
Confidence 4688888888776542221 111 001112456899998775544444444
No 223
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.88 E-value=58 Score=19.91 Aligned_cols=17 Identities=29% Similarity=0.723 Sum_probs=12.8
Q ss_pred CCCCccccccccCCCCc
Q 020671 256 DSLPFACFICRKPFVDP 272 (323)
Q Consensus 256 e~~p~~C~IC~e~~~~P 272 (323)
...||.|.+|...|...
T Consensus 9 ~~~~~~C~~C~k~f~~~ 25 (46)
T 2ep0_A 9 GEKPYKCDVCHKSFRYG 25 (46)
T ss_dssp TCCSEECSSSCCEESSH
T ss_pred CCCCeeCcccCcccCCh
Confidence 34689999998887654
No 224
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=20.85 E-value=72 Score=19.45 Aligned_cols=16 Identities=25% Similarity=0.507 Sum_probs=12.0
Q ss_pred CCCccccccccCCCCc
Q 020671 257 SLPFACFICRKPFVDP 272 (323)
Q Consensus 257 ~~p~~C~IC~e~~~~P 272 (323)
..||.|.+|...|...
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2ema_A 10 EKRYKCNECGKVFSRN 25 (46)
T ss_dssp SCCEECSSSCCEESSH
T ss_pred CcCcCCCCCcchhCCH
Confidence 4678999988877654
No 225
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.66 E-value=14 Score=25.63 Aligned_cols=38 Identities=21% Similarity=0.497 Sum_probs=21.0
Q ss_pred cccccccCCCCcEEc--cCCCcccHHHHHHhcc----CCCCCCCCC
Q 020671 261 ACFICRKPFVDPVVT--KCKHYFCEHCALKHHS----KNKKCFVCN 300 (323)
Q Consensus 261 ~C~IC~e~~~~PVvt--~CGH~FC~~Ci~~~~~----~s~~CP~Cr 300 (323)
.|.||... ..++. .|...|-..|+..-+. ....||.|.
T Consensus 11 ~C~vC~~~--g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~ 54 (56)
T 2yql_A 11 FCSVCRKS--GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 54 (56)
T ss_dssp SCSSSCCS--SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHH
T ss_pred CCccCCCC--CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhh
Confidence 58888874 22222 4555666666654332 345566663
Done!