Your job contains 1 sequence.
>020672
MGSHSSTRAVGAILHRISNGVSSKWSPNSFALSKHGLLSRNLFSSASSISSWIPLYEVKH
CNFQVRTIRTFAPVCMGRRSSKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNT
VLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITR
SVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPP
VNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAME
LNKELIAKLLELDDVDAVYTDQI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020672
(323 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2043480 - symbol:AT2G25830 species:3702 "Arabi... 1086 6.1e-110 1
UNIPROTKB|P62036 - symbol:GSU1074 "Probable transcription... 351 4.7e-32 1
TIGR_CMR|GSU_1074 - symbol:GSU_1074 "conserved hypothetic... 351 4.7e-32 1
UNIPROTKB|Q609L3 - symbol:MCA1220 "Probable transcription... 349 7.7e-32 1
UNIPROTKB|Q3Z9B1 - symbol:DET0444 "Probable transcription... 324 3.4e-29 1
TIGR_CMR|DET_0444 - symbol:DET_0444 "conserved hypothetic... 324 3.4e-29 1
UNIPROTKB|Q4K7D6 - symbol:PFL_4766 "Probable transcriptio... 322 5.6e-29 1
UNIPROTKB|P0A8A2 - symbol:yeeN "conserved protein" specie... 320 9.1e-29 1
UNIPROTKB|Q5LUI2 - symbol:SPO1072 "Probable transcription... 316 2.4e-28 1
TIGR_CMR|SPO_1072 - symbol:SPO_1072 "conserved hypothetic... 316 2.4e-28 1
UNIPROTKB|Q723U1 - symbol:LMOf2365_0385 "Probable transcr... 313 5.0e-28 1
UNIPROTKB|P0A8A0 - symbol:yebC "conserved protein" specie... 312 6.4e-28 1
UNIPROTKB|Q8EEF0 - symbol:SO_2432 "Probable transcription... 311 8.2e-28 1
TIGR_CMR|SO_2432 - symbol:SO_2432 "conserved hypothetical... 311 8.2e-28 1
UNIPROTKB|Q71ZD5 - symbol:LMOf2365_1554 "Probable transcr... 304 4.5e-27 1
UNIPROTKB|Q48FC2 - symbol:PSPPH_3775 "Probable transcript... 303 5.7e-27 1
UNIPROTKB|Q87Y32 - symbol:PSPTO_3980 "Probable transcript... 303 5.7e-27 1
UNIPROTKB|Q81YU1 - symbol:BAS0510 "Probable transcription... 299 1.5e-26 1
TIGR_CMR|BA_0541 - symbol:BA_0541 "conserved hypothetical... 299 1.5e-26 1
UNIPROTKB|Q83BE4 - symbol:CBU_1566 "Probable transcriptio... 298 1.9e-26 1
TIGR_CMR|CBU_1566 - symbol:CBU_1566 "conserved hypothetic... 298 1.9e-26 1
UNIPROTKB|Q2GGC4 - symbol:ECH_0704 "Probable transcriptio... 292 8.4e-26 1
TIGR_CMR|ECH_0704 - symbol:ECH_0704 "conserved hypothetic... 292 8.4e-26 1
UNIPROTKB|Q0C5U8 - symbol:HNE_0161 "Probable transcriptio... 286 3.6e-25 1
UNIPROTKB|Q3ABX7 - symbol:CHY_1525 "Probable transcriptio... 283 7.6e-25 1
TIGR_CMR|CHY_1525 - symbol:CHY_1525 "conserved hypothetic... 283 7.6e-25 1
UNIPROTKB|E2RFJ8 - symbol:TACO1 "Uncharacterized protein"... 277 3.3e-24 1
UNIPROTKB|E1BJK7 - symbol:TACO1 "Uncharacterized protein"... 275 5.3e-24 1
UNIPROTKB|F1RRW7 - symbol:TACO1 "Uncharacterized protein"... 269 2.3e-23 1
RGD|1306784 - symbol:Taco1 "translational activator of mi... 268 2.9e-23 1
UNIPROTKB|Q9BSH4 - symbol:TACO1 "Translational activator ... 263 1.0e-22 1
MGI|MGI:1917457 - symbol:Taco1 "translational activator o... 261 1.6e-22 1
UNIPROTKB|Q2GKM2 - symbol:APH_0480 "Probable transcriptio... 257 4.3e-22 1
UNIPROTKB|Q8EBU8 - symbol:SO_3401 "Probable transcription... 257 4.3e-22 1
TIGR_CMR|APH_0480 - symbol:APH_0480 "conserved hypothetic... 257 4.3e-22 1
TIGR_CMR|SO_3401 - symbol:SO_3401 "conserved hypothetical... 257 4.3e-22 1
UNIPROTKB|Q5HTU2 - symbol:CJE1306 "Probable transcription... 249 3.0e-21 1
TIGR_CMR|CJE_1306 - symbol:CJE_1306 "conserved hypothetic... 249 3.0e-21 1
POMBASE|SPBC8D2.12c - symbol:SPBC8D2.12c "mitochondrial t... 242 1.7e-20 1
UNIPROTKB|Q47WK1 - symbol:CPS_4169 "Probable transcriptio... 232 1.9e-19 1
TIGR_CMR|CPS_4169 - symbol:CPS_4169 "conserved hypothetic... 232 1.9e-19 1
UNIPROTKB|Q9KNF8 - symbol:VC_A0006 "Probable transcriptio... 230 3.1e-19 1
TIGR_CMR|VC_A0006 - symbol:VC_A0006 "conserved hypothetic... 230 3.1e-19 1
SGD|S000003253 - symbol:YGR021W "Putative protein of unkn... 226 8.3e-19 1
UNIPROTKB|Q2GDC7 - symbol:NSE_0641 "Probable transcriptio... 225 1.1e-18 1
TIGR_CMR|NSE_0641 - symbol:NSE_0641 "conserved hypothetic... 225 1.1e-18 1
CGD|CAL0002610 - symbol:orf19.805 species:5476 "Candida a... 219 4.6e-18 1
UNIPROTKB|Q5AHJ1 - symbol:CaO19.805 "Putative uncharacter... 219 4.6e-18 1
UNIPROTKB|Q4K9M3 - symbol:PFL_3960 "Probable transcriptio... 189 1.1e-14 1
UNIPROTKB|Q880J5 - symbol:PSPTO_3162 "Probable transcript... 188 1.4e-14 1
UNIPROTKB|Q48JK4 - symbol:PSPPH_2212 "Probable transcript... 186 2.4e-14 1
ASPGD|ASPL0000002583 - symbol:AN6599 species:162425 "Emer... 192 7.5e-14 1
WB|WBGene00021757 - symbol:Y50D7A.9 species:6239 "Caenorh... 114 0.00037 1
>TAIR|locus:2043480 [details] [associations]
symbol:AT2G25830 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009073 "aromatic
amino acid family biosynthetic process" evidence=RCA] [GO:0016226
"iron-sulfur cluster assembly" evidence=RCA] [GO:0042819 "vitamin
B6 biosynthetic process" evidence=RCA] GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC005395 Gene3D:1.10.10.200
InterPro:IPR017856 eggNOG:COG0217 HOGENOM:HOG000228370 OMA:PDGNPTL
Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 EMBL:AY114086 EMBL:AY056230 IPI:IPI00536195 PIR:C84653
RefSeq:NP_565610.1 UniGene:At.26356 ProteinModelPortal:O82314
SMR:O82314 STRING:O82314 PaxDb:O82314 PRIDE:O82314
EnsemblPlants:AT2G25830.1 GeneID:817125 KEGG:ath:AT2G25830
TAIR:At2g25830 InParanoid:O82314 PhylomeDB:O82314
ProtClustDB:CLSN2688427 Genevestigator:O82314 GermOnline:AT2G25830
Uniprot:O82314
Length = 331
Score = 1086 (387.4 bits), Expect = 6.1e-110, P = 6.1e-110
Identities = 229/336 (68%), Positives = 255/336 (75%)
Query: 1 MGSHSSTRAVGAILHRISNGVSSKWSPNSFALSKHGXXXXXXXXXXXXXXXWIPLYEVKH 60
M SH S R IL R SNGVSS+ NS + H P H
Sbjct: 1 MASHCSMRV---ILLRFSNGVSSRSILNS---TNHRLLSLTMTNTLSSLSSISPHTTTSH 54
Query: 61 ------------C--NFQVRTIRTFAPVCMGRRSSKIAGRKGAQDAKKAKLYSRMGKEVI 106
C Q+R I P+CMGRRSSKIAGRKGAQD+KKAKLY R+GKEV+
Sbjct: 55 FTAASQQSDDQNCFRKLQLRKISISTPLCMGRRSSKIAGRKGAQDSKKAKLYCRIGKEVV 114
Query: 107 SAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVYGYGG 166
SAVKKGGPNP SNT LA +L+KAKELDVPKDIVERNIKRASEKGQEAFIEK+YEVYGYGG
Sbjct: 115 SAVKKGGPNPVSNTTLATILDKAKELDVPKDIVERNIKRASEKGQEAFIEKIYEVYGYGG 174
Query: 167 VSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLD 226
VS+VVEVLTDKI RSVAA+R VVKD GGKMAD GSVMFKF+R RVVNIK T+ADKDQLL
Sbjct: 175 VSMVVEVLTDKINRSVAAIRSVVKDYGGKMADSGSVMFKFKRVRVVNIKVTEADKDQLLI 234
Query: 227 IALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSEL 286
IALDAGAEDVIEPP EDDTDEDR ERYYK+V++++NY+ I +KLR+ G+ FE DNGSEL
Sbjct: 235 IALDAGAEDVIEPPTYEDDTDEDREERYYKIVTSNENYSTILSKLRDEGVNFEPDNGSEL 294
Query: 287 LPITTIEVDDEAMELNKELIAKLLELDDVDAVYTDQ 322
LP+TT+EVDDEAMELNKEL+ KLLELDDVDAVY DQ
Sbjct: 295 LPLTTVEVDDEAMELNKELMQKLLELDDVDAVYIDQ 330
>UNIPROTKB|P62036 [details] [associations]
symbol:GSU1074 "Probable transcriptional regulatory protein
GSU1074" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 RefSeq:NP_952127.1
ProteinModelPortal:P62036 SMR:P62036 GeneID:2688637
KEGG:gsu:GSU1074 PATRIC:22024914
BioCyc:GSUL243231:GH27-1069-MONOMER Uniprot:P62036
Length = 247
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 85/242 (35%), Positives = 139/242 (57%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
S I +KGA DAK+ K+++++ KE+ A K GG +P N L A ++KAK ++PKD +E
Sbjct: 8 STIRHKKGAADAKRGKVFTKLIKEITVAAKIGGGDPNGNPRLRAAVDKAKAENMPKDNIE 67
Query: 141 RNIKRAS-EKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
R IK+ + E ++ E +YE YG GGV+++VE +TD R+V VR C G M +
Sbjct: 68 RAIKKGTGELEGVSYEEIIYEGYGPGGVAVLVECMTDNRNRTVGEVRSTFTKCNGNMGEA 127
Query: 200 GSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVS 259
G V + F + ++ + D D ++L + AL+AGA+DV DE E Y+V++
Sbjct: 128 GCVSWMFDKKGLIVLS-KDVDFEKLFETALEAGADDV---------ADE---EEQYEVLT 174
Query: 260 TSDNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVY 319
+ D+ L +AG PFE+ + ++P T +++D + E +L+ +L + DDV VY
Sbjct: 175 DPAAFIDVREALEKAGFPFESAEIT-MIPQTMVKLDGKNAENMLKLMDRLEDNDDVQNVY 233
Query: 320 TD 321
+
Sbjct: 234 AN 235
>TIGR_CMR|GSU_1074 [details] [associations]
symbol:GSU_1074 "conserved hypothetical protein TIGR01033"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 RefSeq:NP_952127.1
ProteinModelPortal:P62036 SMR:P62036 GeneID:2688637
KEGG:gsu:GSU1074 PATRIC:22024914
BioCyc:GSUL243231:GH27-1069-MONOMER Uniprot:P62036
Length = 247
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 85/242 (35%), Positives = 139/242 (57%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
S I +KGA DAK+ K+++++ KE+ A K GG +P N L A ++KAK ++PKD +E
Sbjct: 8 STIRHKKGAADAKRGKVFTKLIKEITVAAKIGGGDPNGNPRLRAAVDKAKAENMPKDNIE 67
Query: 141 RNIKRAS-EKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
R IK+ + E ++ E +YE YG GGV+++VE +TD R+V VR C G M +
Sbjct: 68 RAIKKGTGELEGVSYEEIIYEGYGPGGVAVLVECMTDNRNRTVGEVRSTFTKCNGNMGEA 127
Query: 200 GSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVS 259
G V + F + ++ + D D ++L + AL+AGA+DV DE E Y+V++
Sbjct: 128 GCVSWMFDKKGLIVLS-KDVDFEKLFETALEAGADDV---------ADE---EEQYEVLT 174
Query: 260 TSDNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVY 319
+ D+ L +AG PFE+ + ++P T +++D + E +L+ +L + DDV VY
Sbjct: 175 DPAAFIDVREALEKAGFPFESAEIT-MIPQTMVKLDGKNAENMLKLMDRLEDNDDVQNVY 233
Query: 320 TD 321
+
Sbjct: 234 AN 235
>UNIPROTKB|Q609L3 [details] [associations]
symbol:MCA1220 "Probable transcriptional regulatory protein
MCA1220" species:243233 "Methylococcus capsulatus str. Bath"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 EMBL:AE017282 GenomeReviews:AE017282_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217 OMA:PDGNPTL
Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 ProtClustDB:PRK00110 TIGRFAMs:TIGR01033
RefSeq:YP_113684.1 ProteinModelPortal:Q609L3 SMR:Q609L3
GeneID:3104302 KEGG:mca:MCA1220 PATRIC:22606274
HOGENOM:HOG000228371 Uniprot:Q609L3
Length = 248
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 85/242 (35%), Positives = 139/242 (57%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I RKGAQDAK+ KL++++ +E+ A + GGP+P +N L ++KA ++ KD +E
Sbjct: 8 ANIQHRKGAQDAKRGKLFTKLIREITVASRTGGPDPGNNPRLRTAIDKALVANMSKDTIE 67
Query: 141 RNIKRASEKGQEAFIEKV-YEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
R IK+ S E+V YE YG GG++++V+ LTD R+VA VR GG +
Sbjct: 68 RAIKKGSGAADGDNYEEVRYEGYGPGGIAVLVDCLTDNRNRTVAEVRHAFSKAGGNLGTD 127
Query: 200 GSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVS 259
GSV + F + VV+ D +D++++ ALDAGA+DV+ VNED + + V++
Sbjct: 128 GSVAYLFSKTGVVSFS-ADLGEDRVMEPALDAGADDVV---VNEDGSVD--------VLT 175
Query: 260 TSDNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVY 319
D + + L AG+ E+ + + T++++D E E L+ +L +LDDV VY
Sbjct: 176 APDQFEAVRDALEAAGLTPESAEVT-MRASTSVKLDKEDAEKMIRLLERLEDLDDVQNVY 234
Query: 320 TD 321
++
Sbjct: 235 SN 236
>UNIPROTKB|Q3Z9B1 [details] [associations]
symbol:DET0444 "Probable transcriptional regulatory protein
DET0444" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 RefSeq:YP_181188.1
ProteinModelPortal:Q3Z9B1 SMR:Q3Z9B1 STRING:Q3Z9B1 GeneID:3230215
KEGG:det:DET0444 PATRIC:21607957 BioCyc:DETH243164:GJNF-444-MONOMER
Uniprot:Q3Z9B1
Length = 251
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 77/233 (33%), Positives = 132/233 (56%)
Query: 87 KGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRA 146
KGA DAK+ +L++++ +E+I A K+GGP+P N L ++KAK+ +P D +ER IK+
Sbjct: 14 KGAADAKRGQLFTKLSREIIFAAKQGGPSPEGNARLRLAIQKAKDNRMPSDNIERAIKKG 73
Query: 147 SEKGQEA-FIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFK 205
S + + A IE + E YG GGV+++V ++D R+V+ VR + GG +A+ G+V +
Sbjct: 74 SGELEGATVIEIILEGYGPGGVAVLVNGMSDNRNRTVSDVRHMFSKSGGSLAESGAVSWI 133
Query: 206 FRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYT 265
F V+ ++ D D+L A+D GAEDV + +ED Y ++ + +
Sbjct: 134 FETKGVIGVETVGLDTDELSLKAIDMGAEDV--------NIEED----YMEIYTAMPDME 181
Query: 266 DITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDDVDAV 318
+ +L G+ ++ ++P T+++D+E +L+ KL ELDDV V
Sbjct: 182 KVRQQLEAQGVTVDSAE-INMIPKNTVKLDEETSLQVLKLLDKLEELDDVQTV 233
>TIGR_CMR|DET_0444 [details] [associations]
symbol:DET_0444 "conserved hypothetical protein TIGR01033"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 RefSeq:YP_181188.1
ProteinModelPortal:Q3Z9B1 SMR:Q3Z9B1 STRING:Q3Z9B1 GeneID:3230215
KEGG:det:DET0444 PATRIC:21607957 BioCyc:DETH243164:GJNF-444-MONOMER
Uniprot:Q3Z9B1
Length = 251
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 77/233 (33%), Positives = 132/233 (56%)
Query: 87 KGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRA 146
KGA DAK+ +L++++ +E+I A K+GGP+P N L ++KAK+ +P D +ER IK+
Sbjct: 14 KGAADAKRGQLFTKLSREIIFAAKQGGPSPEGNARLRLAIQKAKDNRMPSDNIERAIKKG 73
Query: 147 SEKGQEA-FIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFK 205
S + + A IE + E YG GGV+++V ++D R+V+ VR + GG +A+ G+V +
Sbjct: 74 SGELEGATVIEIILEGYGPGGVAVLVNGMSDNRNRTVSDVRHMFSKSGGSLAESGAVSWI 133
Query: 206 FRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYT 265
F V+ ++ D D+L A+D GAEDV + +ED Y ++ + +
Sbjct: 134 FETKGVIGVETVGLDTDELSLKAIDMGAEDV--------NIEED----YMEIYTAMPDME 181
Query: 266 DITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDDVDAV 318
+ +L G+ ++ ++P T+++D+E +L+ KL ELDDV V
Sbjct: 182 KVRQQLEAQGVTVDSAE-INMIPKNTVKLDEETSLQVLKLLDKLEELDDVQTV 233
>UNIPROTKB|Q4K7D6 [details] [associations]
symbol:PFL_4766 "Probable transcriptional regulatory
protein PFL_4766" species:220664 "Pseudomonas protegens Pf-5"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 EMBL:CP000076 GenomeReviews:CP000076_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 RefSeq:YP_261847.1
HSSP:P0A8A0 ProteinModelPortal:Q4K7D6 SMR:Q4K7D6 STRING:Q4K7D6
GeneID:3479177 KEGG:pfl:PFL_4766 PATRIC:19878986
BioCyc:PFLU220664:GIX8-4807-MONOMER Uniprot:Q4K7D6
Length = 248
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 83/243 (34%), Positives = 131/243 (53%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I RK QDAK+ K++++ +E+ A ++GG +P SN L L+KA ++ +DI++
Sbjct: 8 ANIKHRKERQDAKRGKIFTKWIRELTVAARQGGGDPNSNPRLRLALDKALGANMSRDIID 67
Query: 141 RNIKRAS-EKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
R I R + G + +E YE YG GV+++VE +TD R+ AAVR CGG +
Sbjct: 68 RAIARGTGAAGSDDVVELTYEGYGPNGVAVMVECMTDNRNRTAAAVRHAFSKCGGNLGTD 127
Query: 200 GSVMFKFRRARVVNIKFTDA-DKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVV 258
GSV + F R I F + D+D L++ A++A A+DV+ NED + + V
Sbjct: 128 GSVAYLFERKG--QITFAEGVDEDALMEAAMEADADDVVS---NEDGSID--------VF 174
Query: 259 STSDNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDDVDAV 318
++ + + L AG D +LP T+ E+D E E +LI L +LDDV V
Sbjct: 175 TSFAGFYGVRNALEAAGFT-AADAEIVMLPTTSAELDLEGAEKVLKLIDMLEDLDDVQNV 233
Query: 319 YTD 321
Y++
Sbjct: 234 YSN 236
>UNIPROTKB|P0A8A2 [details] [associations]
symbol:yeeN "conserved protein" species:83333 "Escherichia
coli K-12" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] GO:GO:0005737 GO:GO:0006355
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 TIGRFAMs:TIGR01033 HOGENOM:HOG000228371
ProtClustDB:PRK12378 OMA:QFHAVQE HAMAP:MF_00918 InterPro:IPR026562
PIR:A64963 RefSeq:NP_416490.1 RefSeq:YP_490229.1
ProteinModelPortal:P0A8A2 SMR:P0A8A2 DIP:DIP-36184N IntAct:P0A8A2
PaxDb:P0A8A2 PRIDE:P0A8A2 EnsemblBacteria:EBESCT00000004333
EnsemblBacteria:EBESCT00000015008 GeneID:12930165 GeneID:946493
KEGG:ecj:Y75_p1947 KEGG:eco:b1983 PATRIC:32119297 EchoBASE:EB3163
EcoGene:EG13382 BioCyc:EcoCyc:G7068-MONOMER
BioCyc:ECOL316407:JW1964-MONOMER Genevestigator:P0A8A2
Uniprot:P0A8A2
Length = 238
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 80/244 (32%), Positives = 130/244 (53%)
Query: 76 MGRRSSKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVP 135
MGR+ + I +K A+D +K+Y++ G E+ +A K+G P+P NT L V+E+AK+ VP
Sbjct: 1 MGRKWANIVAKKTAKDGATSKIYAKFGVEIYAAAKQGEPDPELNTSLKFVIERAKQAQVP 60
Query: 136 KDIVERNIKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGK 195
K ++++ I +A G E F++ YE +G G I+ E LT + R++A VR + GG
Sbjct: 61 KHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMIIAETLTSNVNRTIANVRTIFNKKGGN 120
Query: 196 MADPGSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYY 255
+ GSV + F V+ K TD D + +I L+A DV D T+E+ Y
Sbjct: 121 IGAAGSVSYMFDNTGVIVFKGTDPD--HIFEILLEAEV-DV------RDVTEEEGNIVIY 171
Query: 256 KVVSTSDNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDDV 315
+D + I L+ AGI + E++ + +E+ E +E+ + L+ L + DDV
Sbjct: 172 --TEPTDLHKGIAA-LKAAGITEFSTTELEMIAQSEVELSPEDLEIFEGLVDALEDDDDV 228
Query: 316 DAVY 319
VY
Sbjct: 229 QKVY 232
>UNIPROTKB|Q5LUI2 [details] [associations]
symbol:SPO1072 "Probable transcriptional regulatory protein
SPO1072" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 Gene3D:3.30.1270.10 Gene3D:3.30.70.980
InterPro:IPR002876 InterPro:IPR026563 InterPro:IPR026564
PANTHER:PTHR12532 Pfam:PF01709 RefSeq:YP_166323.1
ProteinModelPortal:Q5LUI2 SMR:Q5LUI2 GeneID:3195080
KEGG:sil:SPO1072 PATRIC:23375445 OMA:TVMMAAI ProtClustDB:PRK00110
TIGRFAMs:TIGR01033 Uniprot:Q5LUI2
Length = 246
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 85/243 (34%), Positives = 133/243 (54%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I RKG QDA ++KL+S+ KE+ A K G P+P N L +++AK +PKD +E
Sbjct: 8 ANIQHRKGRQDAARSKLFSKFSKEITVAAKMGDPDPDKNPRLRLAIKEAKSQSMPKDNIE 67
Query: 141 RNIKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPG 200
R IK+A +A+ E YE YG GV+++VE +TD R+ + VR GG + + G
Sbjct: 68 RAIKKAIGGDGDAYEEIRYEGYGPNGVAVIVEAMTDNRNRTASNVRSTFTKHGGNLGETG 127
Query: 201 SVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVST 260
SV F F R V + D D ++ A++AGAEDV + +E + +
Sbjct: 128 SVGFMFERKGEVVYPASVGDADTVMMAAIEAGAEDV------------ESSEEGHVIWCA 175
Query: 261 SDNYTDITTKLREAGIPFETDNGSELL--PITTIEVDDEAMELNKELIAKLLELDDVDAV 318
+ +++T L EA + E+D+ ++L+ P TT E+D EAM+ +L+ L + DDV V
Sbjct: 176 DTDLNEVSTAL-EAELG-ESDS-TKLVWKPSTTTELDLEAMQKLMKLVDALEDDDDVQRV 232
Query: 319 YTD 321
T+
Sbjct: 233 TTN 235
>TIGR_CMR|SPO_1072 [details] [associations]
symbol:SPO_1072 "conserved hypothetical protein TIGR01033"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 Gene3D:3.30.1270.10 Gene3D:3.30.70.980
InterPro:IPR002876 InterPro:IPR026563 InterPro:IPR026564
PANTHER:PTHR12532 Pfam:PF01709 RefSeq:YP_166323.1
ProteinModelPortal:Q5LUI2 SMR:Q5LUI2 GeneID:3195080
KEGG:sil:SPO1072 PATRIC:23375445 OMA:TVMMAAI ProtClustDB:PRK00110
TIGRFAMs:TIGR01033 Uniprot:Q5LUI2
Length = 246
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 85/243 (34%), Positives = 133/243 (54%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I RKG QDA ++KL+S+ KE+ A K G P+P N L +++AK +PKD +E
Sbjct: 8 ANIQHRKGRQDAARSKLFSKFSKEITVAAKMGDPDPDKNPRLRLAIKEAKSQSMPKDNIE 67
Query: 141 RNIKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPG 200
R IK+A +A+ E YE YG GV+++VE +TD R+ + VR GG + + G
Sbjct: 68 RAIKKAIGGDGDAYEEIRYEGYGPNGVAVIVEAMTDNRNRTASNVRSTFTKHGGNLGETG 127
Query: 201 SVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVST 260
SV F F R V + D D ++ A++AGAEDV + +E + +
Sbjct: 128 SVGFMFERKGEVVYPASVGDADTVMMAAIEAGAEDV------------ESSEEGHVIWCA 175
Query: 261 SDNYTDITTKLREAGIPFETDNGSELL--PITTIEVDDEAMELNKELIAKLLELDDVDAV 318
+ +++T L EA + E+D+ ++L+ P TT E+D EAM+ +L+ L + DDV V
Sbjct: 176 DTDLNEVSTAL-EAELG-ESDS-TKLVWKPSTTTELDLEAMQKLMKLVDALEDDDDVQRV 232
Query: 319 YTD 321
T+
Sbjct: 233 TTN 235
>UNIPROTKB|Q723U1 [details] [associations]
symbol:LMOf2365_0385 "Probable transcriptional regulatory
protein LMOf2365_0385" species:265669 "Listeria monocytogenes
serotype 4b str. F2365" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 EMBL:AE017262
GenomeReviews:AE017262_GR Gene3D:1.10.10.200 InterPro:IPR017856
eggNOG:COG0217 Gene3D:3.30.1270.10 Gene3D:3.30.70.980
InterPro:IPR002876 InterPro:IPR026563 InterPro:IPR026564
PANTHER:PTHR12532 Pfam:PF01709 TIGRFAMs:TIGR01033
HOGENOM:HOG000228371 ProtClustDB:PRK12378 OMA:QFHAVQE
RefSeq:YP_012993.1 ProteinModelPortal:Q723U1 STRING:Q723U1
GeneID:2797949 KEGG:lmf:LMOf2365_0385 PATRIC:20321977
HAMAP:MF_00918 InterPro:IPR026562 Uniprot:Q723U1
Length = 239
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 78/244 (31%), Positives = 130/244 (53%)
Query: 76 MGRRSSKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVP 135
MGR+ + I +K ++D +++Y++ G E+ A K G P+P +N L V+E+AK +VP
Sbjct: 1 MGRKWANIKEKKASKDKTNSRIYAKFGIEIYVAAKSGDPDPHANQKLRFVIERAKTYNVP 60
Query: 136 KDIVERNIKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGK 195
K I++R I++A G E + E YE +G G I+V+ LT+ + R+ + VR GG
Sbjct: 61 KHIIDRAIEKAKGTGDETYSELRYEGFGPNGSMIIVDALTNNVNRTASDVRAAYSKNGGN 120
Query: 196 MADPGSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYY 255
M GSV + F + ++ DAD +LL++ ++ DV D DED Y
Sbjct: 121 MGVSGSVAYMFDNTAIFGVEGKDAD--ELLELLMEVDI-DV------RDILDEDGQAIIY 171
Query: 256 KVVSTSDNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDDV 315
+ +++ + L+ AGI T E++P I++ E +E ++LI L +L+DV
Sbjct: 172 ---AEPEDFHKVQEGLKAAGIEEFTVAEIEMIPQNDIQLSGEDLEKFEKLIDALEDLEDV 228
Query: 316 DAVY 319
VY
Sbjct: 229 QKVY 232
>UNIPROTKB|P0A8A0 [details] [associations]
symbol:yebC "conserved protein" species:83333 "Escherichia
coli K-12" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] HAMAP:MF_00693 GO:GO:0005737
GO:GO:0006355 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003677 GO:GO:0006351 EMBL:X59551
EMBL:D10165 Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 PIR:C38113
RefSeq:NP_416378.1 RefSeq:YP_490126.1 PDB:1KON PDBsum:1KON
ProteinModelPortal:P0A8A0 SMR:P0A8A0 DIP:DIP-47886N IntAct:P0A8A0
MINT:MINT-1241216 PaxDb:P0A8A0 PRIDE:P0A8A0
EnsemblBacteria:EBESCT00000002866 EnsemblBacteria:EBESCT00000002867
EnsemblBacteria:EBESCT00000017567 GeneID:12932695 GeneID:946379
KEGG:ecj:Y75_p1840 KEGG:eco:b1864 PATRIC:32119051 EchoBASE:EB1127
EcoGene:EG11137 BioCyc:EcoCyc:EG11137-MONOMER
BioCyc:ECOL316407:JW1853-MONOMER EvolutionaryTrace:P0A8A0
Genevestigator:P0A8A0 Uniprot:P0A8A0
Length = 246
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 80/235 (34%), Positives = 126/235 (53%)
Query: 86 RKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKR 145
RK AQDAK+ K+++++ +E+++A K GG +P +N L A ++KA ++ +D + R I R
Sbjct: 13 RKAAQDAKRGKIFTKIIRELVTAAKLGGGDPDANPRLRAAVDKALSNNMTRDTLNRAIAR 72
Query: 146 ASEKGQEAFIEKV-YEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMF 204
+A +E + YE YG GG +I++E L+D R+VA VR CGG + GSV +
Sbjct: 73 GVGGDDDANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKCGGNLGTDGSVAY 132
Query: 205 KFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNY 264
F + V++ F D+D +++ AL+AGAEDV+ T +D A Y
Sbjct: 133 LFSKKGVIS--FEKGDEDTIMEAALEAGAEDVV--------TYDDGAIDVYTAWEEMGKV 182
Query: 265 TDITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVY 319
D L AG+ ++ S ++P T ++D E LI L + DDV VY
Sbjct: 183 RDA---LEAAGLKADSAEVS-MIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVY 233
>UNIPROTKB|Q8EEF0 [details] [associations]
symbol:SO_2432 "Probable transcriptional regulatory protein
SO_2432" species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 RefSeq:NP_718022.1
ProteinModelPortal:Q8EEF0 SMR:Q8EEF0 GeneID:1170145
KEGG:son:SO_2432 PATRIC:23524479 Uniprot:Q8EEF0
Length = 248
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 88/243 (36%), Positives = 132/243 (54%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I RK AQDAK+ KL+++ +E+ + ++GG +P SN L ++KA ++ +D +E
Sbjct: 8 ANIKHRKAAQDAKRGKLFTKFIRELTVSAREGGSDPDSNPRLRIAIDKALGGNMTRDTIE 67
Query: 141 RNIKR-ASE-KGQEAFIEKV-YEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMA 197
R IKR A E +GQ+ +E + YE YG GG +++VE +TD R+V+ VR GG +
Sbjct: 68 RAIKRGAGELEGQQ--LETIIYEGYGPGGTAVMVETMTDNRNRTVSGVRNAFSKSGGNLG 125
Query: 198 DPGSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKV 257
GSV + F + V++ D+D L+D AL+AGAEDV V+ DD D V
Sbjct: 126 TDGSVAYLFTKRGVLSYA-PGTDEDALMDAALEAGAEDV----VSYDDGAID-------V 173
Query: 258 VSTSDNYTDITTKLREAGIPFETDNGS-ELLPITTIEVDDEAMELNKELIAKLLELDDVD 316
+ + ++ L AG F +DN ++ T E+D E E LI L E DDV
Sbjct: 174 FTEPTAFYEVKDALDAAG--FVSDNAEIAMIASTKAELDAETAEKFMRLIDTLEEHDDVQ 231
Query: 317 AVY 319
VY
Sbjct: 232 EVY 234
>TIGR_CMR|SO_2432 [details] [associations]
symbol:SO_2432 "conserved hypothetical protein TIGR01033"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 RefSeq:NP_718022.1
ProteinModelPortal:Q8EEF0 SMR:Q8EEF0 GeneID:1170145
KEGG:son:SO_2432 PATRIC:23524479 Uniprot:Q8EEF0
Length = 248
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 88/243 (36%), Positives = 132/243 (54%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I RK AQDAK+ KL+++ +E+ + ++GG +P SN L ++KA ++ +D +E
Sbjct: 8 ANIKHRKAAQDAKRGKLFTKFIRELTVSAREGGSDPDSNPRLRIAIDKALGGNMTRDTIE 67
Query: 141 RNIKR-ASE-KGQEAFIEKV-YEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMA 197
R IKR A E +GQ+ +E + YE YG GG +++VE +TD R+V+ VR GG +
Sbjct: 68 RAIKRGAGELEGQQ--LETIIYEGYGPGGTAVMVETMTDNRNRTVSGVRNAFSKSGGNLG 125
Query: 198 DPGSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKV 257
GSV + F + V++ D+D L+D AL+AGAEDV V+ DD D V
Sbjct: 126 TDGSVAYLFTKRGVLSYA-PGTDEDALMDAALEAGAEDV----VSYDDGAID-------V 173
Query: 258 VSTSDNYTDITTKLREAGIPFETDNGS-ELLPITTIEVDDEAMELNKELIAKLLELDDVD 316
+ + ++ L AG F +DN ++ T E+D E E LI L E DDV
Sbjct: 174 FTEPTAFYEVKDALDAAG--FVSDNAEIAMIASTKAELDAETAEKFMRLIDTLEEHDDVQ 231
Query: 317 AVY 319
VY
Sbjct: 232 EVY 234
>UNIPROTKB|Q71ZD5 [details] [associations]
symbol:LMOf2365_1554 "Probable transcriptional regulatory
protein LMOf2365_1554" species:265669 "Listeria monocytogenes
serotype 4b str. F2365" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] HAMAP:MF_00693
GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AE017262 GenomeReviews:AE017262_GR Gene3D:1.10.10.200
InterPro:IPR017856 eggNOG:COG0217 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 HOGENOM:HOG000228371
RefSeq:YP_014152.1 ProteinModelPortal:Q71ZD5 STRING:Q71ZD5
GeneID:2797861 KEGG:lmf:LMOf2365_1554 PATRIC:20324347
Uniprot:Q71ZD5
Length = 241
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 82/248 (33%), Positives = 135/248 (54%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I GRK AQD+K++K++ ++ +E+ A KKG P+P N L V++KAK +++P D ++
Sbjct: 8 NNIQGRKNAQDSKRSKVFQKLAREIFVAAKKG-PDPNLNPSLRLVMDKAKAVNMPNDNIK 66
Query: 141 RNI-KRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
R I K A E + E YE Y GG++++V LTD R+ VR GG + +
Sbjct: 67 RAIDKAAGNTSGENYDEVTYEGYAPGGIAVLVHALTDNKNRTSTNVRVAFNKNGGSLGET 126
Query: 200 GSVMFKF-RRARVVNIKF-TDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKV 257
GSV + F R+ +V ++ D D+++ + A++AGA+DV V+ED +++
Sbjct: 127 GSVSYMFDRKGYLVILREGLDVDEEEFMLEAIEAGADDV---EVSED---------VFEI 174
Query: 258 VSTSDNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLEL----D 313
+ + ++ L+EAG F T +EL T+ +E E N+ K+LE D
Sbjct: 175 FTDPATFPEVKEALQEAGYTFAT---AELSMFPTVY--NEVAENNQTQFDKMLEALEDDD 229
Query: 314 DVDAVYTD 321
DV VYT+
Sbjct: 230 DVQEVYTN 237
>UNIPROTKB|Q48FC2 [details] [associations]
symbol:PSPPH_3775 "Probable transcriptional regulatory
protein PSPPH_3775" species:264730 "Pseudomonas syringae pv.
phaseolicola 1448A" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00693 GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 EMBL:CP000058
GenomeReviews:CP000058_GR Gene3D:1.10.10.200 InterPro:IPR017856
eggNOG:COG0217 HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 RefSeq:YP_275915.1
ProteinModelPortal:Q48FC2 SMR:Q48FC2 STRING:Q48FC2 GeneID:3558456
KEGG:psp:PSPPH_3775 PATRIC:19976987 Uniprot:Q48FC2
Length = 248
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 81/242 (33%), Positives = 127/242 (52%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I RK QDAKK K++++ +E+ A ++GG +P SN L L+KA ++ +D ++
Sbjct: 8 ANIKHRKERQDAKKGKIFTKWIRELTVAARQGGGDPGSNPRLRLALDKALGANMTRDTID 67
Query: 141 RNIKRASEKGQEAFIEKV-YEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
R + R +E++ YE YG GGV+I+VE +TD R+ AAVR CGG +
Sbjct: 68 RAVARGVGASDGDDVEELGYEGYGPGGVAIMVETMTDNRNRTAAAVRHAFTKCGGNLGTD 127
Query: 200 GSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVS 259
GSV + F R ++ D+D L++ A++A A+DV V DD D V +
Sbjct: 128 GSVAYLFDRKGQISFA-AGVDEDALIEAAMEADADDV----VTNDDGSID-------VFT 175
Query: 260 TSDNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVY 319
+ + + L AG +D +LP T+ +D E E +LI L +LDDV VY
Sbjct: 176 SFSGFYAVRNALEAAGFK-ASDAEIVMLPTTSAVLDLETAEKVLKLIDMLEDLDDVQNVY 234
Query: 320 TD 321
++
Sbjct: 235 SN 236
>UNIPROTKB|Q87Y32 [details] [associations]
symbol:PSPTO_3980 "Probable transcriptional regulatory
protein PSPTO_3980" species:223283 "Pseudomonas syringae pv. tomato
str. DC3000" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00693 GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 EMBL:AE016853
GenomeReviews:AE016853_GR Gene3D:1.10.10.200 InterPro:IPR017856
eggNOG:COG0217 HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 RefSeq:NP_793744.1
ProteinModelPortal:Q87Y32 SMR:Q87Y32 GeneID:1185656
KEGG:pst:PSPTO_3980 PATRIC:19999437
BioCyc:PSYR223283:GJIX-4045-MONOMER Uniprot:Q87Y32
Length = 248
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 80/242 (33%), Positives = 126/242 (52%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I RK QDAKK K++++ +E+ A ++GG +P SN L L+KA ++ +D ++
Sbjct: 8 ANIKHRKERQDAKKGKIFTKWIRELTVAARQGGGDPGSNPRLRLALDKALGANMTRDTID 67
Query: 141 RNIKRASEKGQEAFIEKV-YEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
R + R +E++ YE YG GGV+++VE +TD R+ AAVR CGG +
Sbjct: 68 RAVARGVGASDGDDVEELGYEGYGPGGVAVMVETMTDNRNRTAAAVRHAFTKCGGNLGTD 127
Query: 200 GSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVS 259
GSV + F R ++ D+D L++ A++A A+DV V DD D V +
Sbjct: 128 GSVAYLFDRKGQISFA-AGVDEDSLIEAAMEADADDV----VTNDDGSID-------VFT 175
Query: 260 TSDNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDDVDAVY 319
+ + + L AG D +LP T+ +D E E +LI L +LDDV VY
Sbjct: 176 SFSGFYAVRNALEAAGF-MAADAEIVMLPTTSAVLDLETAEKVLKLIDMLEDLDDVQNVY 234
Query: 320 TD 321
++
Sbjct: 235 SN 236
>UNIPROTKB|Q81YU1 [details] [associations]
symbol:BAS0510 "Probable transcriptional regulatory protein
BA_0541/GBAA_0541/BAS0510" species:1392 "Bacillus anthracis"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] GO:GO:0005737 GO:GO:0006355 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 TIGRFAMs:TIGR01033 HOGENOM:HOG000228371
ProtClustDB:PRK12378 OMA:QFHAVQE HAMAP:MF_00918 InterPro:IPR026562
RefSeq:NP_843076.1 RefSeq:YP_017163.1 RefSeq:YP_026788.1
ProteinModelPortal:Q81YU1 DNASU:1087851
EnsemblBacteria:EBBACT00000009998 EnsemblBacteria:EBBACT00000014462
EnsemblBacteria:EBBACT00000021356 GeneID:1087851 GeneID:2817034
GeneID:2852781 KEGG:ban:BA_0541 KEGG:bar:GBAA_0541 KEGG:bat:BAS0510
BioCyc:BANT260799:GJAJ-569-MONOMER
BioCyc:BANT261594:GJ7F-595-MONOMER Uniprot:Q81YU1
Length = 239
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 71/246 (28%), Positives = 132/246 (53%)
Query: 76 MGRRSSKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVP 135
MGR+ + I +K ++DA +++Y++ G+E+ A K+G P+P SN L VLE+AK +VP
Sbjct: 1 MGRKWNNIKDKKASKDANTSRIYAKFGREIYVAAKQGEPDPESNQALRVVLERAKTYNVP 60
Query: 136 KDIVERNIKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGK 195
+ I++R +++A +E + E YE +G G ++V+ LT+ + R+ A VR G
Sbjct: 61 RTIIDRAVEKAKGGSEENYDELRYEGFGPNGAMVIVDTLTNNVNRTAADVRAAFSKNSGN 120
Query: 196 MADPGSVMFKFRRARVVNIKFTDADKDQLLDIALDAG--AEDVIEPPVNEDDTDEDRAER 253
M GSV + F V+ ++ D++L+I ++A A D++E +ED
Sbjct: 121 MGVNGSVAYMFDATAVIGLE--GKTSDEVLEILMEADVDARDILE--------EEDAVIV 170
Query: 254 YYKVVSTSDNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELD 313
Y + D + + + L++AG+ T +L + + ++A ++++ L +L+
Sbjct: 171 Y----AEPDQFHAVQSALKDAGVEEFTVAELTMLAQNDVTLPEDAQAQFEKMVDALEDLE 226
Query: 314 DVDAVY 319
DV VY
Sbjct: 227 DVQQVY 232
>TIGR_CMR|BA_0541 [details] [associations]
symbol:BA_0541 "conserved hypothetical protein TIGR01033"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
GO:GO:0005737 GO:GO:0006355 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 TIGRFAMs:TIGR01033 HOGENOM:HOG000228371
ProtClustDB:PRK12378 OMA:QFHAVQE HAMAP:MF_00918 InterPro:IPR026562
RefSeq:NP_843076.1 RefSeq:YP_017163.1 RefSeq:YP_026788.1
ProteinModelPortal:Q81YU1 DNASU:1087851
EnsemblBacteria:EBBACT00000009998 EnsemblBacteria:EBBACT00000014462
EnsemblBacteria:EBBACT00000021356 GeneID:1087851 GeneID:2817034
GeneID:2852781 KEGG:ban:BA_0541 KEGG:bar:GBAA_0541 KEGG:bat:BAS0510
BioCyc:BANT260799:GJAJ-569-MONOMER
BioCyc:BANT261594:GJ7F-595-MONOMER Uniprot:Q81YU1
Length = 239
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 71/246 (28%), Positives = 132/246 (53%)
Query: 76 MGRRSSKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVP 135
MGR+ + I +K ++DA +++Y++ G+E+ A K+G P+P SN L VLE+AK +VP
Sbjct: 1 MGRKWNNIKDKKASKDANTSRIYAKFGREIYVAAKQGEPDPESNQALRVVLERAKTYNVP 60
Query: 136 KDIVERNIKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGK 195
+ I++R +++A +E + E YE +G G ++V+ LT+ + R+ A VR G
Sbjct: 61 RTIIDRAVEKAKGGSEENYDELRYEGFGPNGAMVIVDTLTNNVNRTAADVRAAFSKNSGN 120
Query: 196 MADPGSVMFKFRRARVVNIKFTDADKDQLLDIALDAG--AEDVIEPPVNEDDTDEDRAER 253
M GSV + F V+ ++ D++L+I ++A A D++E +ED
Sbjct: 121 MGVNGSVAYMFDATAVIGLE--GKTSDEVLEILMEADVDARDILE--------EEDAVIV 170
Query: 254 YYKVVSTSDNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELD 313
Y + D + + + L++AG+ T +L + + ++A ++++ L +L+
Sbjct: 171 Y----AEPDQFHAVQSALKDAGVEEFTVAELTMLAQNDVTLPEDAQAQFEKMVDALEDLE 226
Query: 314 DVDAVY 319
DV VY
Sbjct: 227 DVQQVY 232
>UNIPROTKB|Q83BE4 [details] [associations]
symbol:CBU_1566 "Probable transcriptional regulatory
protein CBU_1566" species:227377 "Coxiella burnetii RSA 493"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 RefSeq:NP_820549.1 PDB:4F3Q
PDBsum:4F3Q ProteinModelPortal:Q83BE4 SMR:Q83BE4 PRIDE:Q83BE4
GeneID:1209476 KEGG:cbu:CBU_1566 PATRIC:17931895
BioCyc:CBUR227377:GJ7S-1545-MONOMER Uniprot:Q83BE4
Length = 244
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 76/243 (31%), Positives = 131/243 (53%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I K QDAK+ K+++++ +E+ A + GG + SN L AV++KA ++PKD +
Sbjct: 8 ANIKHAKARQDAKRGKVFTKLIREITVAARLGGEDIDSNPRLRAVVDKAFAANMPKDTIT 67
Query: 141 RNIKRASEKGQ-EAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
R IKR + G + +E YE YG GV+++V+ LTD R+VA VR C G +
Sbjct: 68 RAIKRGAGSGAGDNLVEVRYEGYGPSGVAVMVDCLTDNKNRTVAEVRHAFSKCDGNLGTE 127
Query: 200 GSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVS 259
GSV + F++ ++ ++D++++++IAL+ GAEDV DD D V +
Sbjct: 128 GSVAYLFKQRGLITFP-PNSDEEKIMEIALEVGAEDV----TTNDDGSID-------VTT 175
Query: 260 TSDNYTDITTKLREAGI-PFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDDVDAV 318
+++ I ++ A + P + +L T + +D ++ E L L +LDDV V
Sbjct: 176 LPEDFEKIRNAMKAADLNPSHAE--VTVLASTEVGLDKDSAEQMLRLTEMLEDLDDVQNV 233
Query: 319 YTD 321
Y++
Sbjct: 234 YSN 236
>TIGR_CMR|CBU_1566 [details] [associations]
symbol:CBU_1566 "conserved hypothetical protein TIGR01033"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 RefSeq:NP_820549.1 PDB:4F3Q
PDBsum:4F3Q ProteinModelPortal:Q83BE4 SMR:Q83BE4 PRIDE:Q83BE4
GeneID:1209476 KEGG:cbu:CBU_1566 PATRIC:17931895
BioCyc:CBUR227377:GJ7S-1545-MONOMER Uniprot:Q83BE4
Length = 244
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 76/243 (31%), Positives = 131/243 (53%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I K QDAK+ K+++++ +E+ A + GG + SN L AV++KA ++PKD +
Sbjct: 8 ANIKHAKARQDAKRGKVFTKLIREITVAARLGGEDIDSNPRLRAVVDKAFAANMPKDTIT 67
Query: 141 RNIKRASEKGQ-EAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
R IKR + G + +E YE YG GV+++V+ LTD R+VA VR C G +
Sbjct: 68 RAIKRGAGSGAGDNLVEVRYEGYGPSGVAVMVDCLTDNKNRTVAEVRHAFSKCDGNLGTE 127
Query: 200 GSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVS 259
GSV + F++ ++ ++D++++++IAL+ GAEDV DD D V +
Sbjct: 128 GSVAYLFKQRGLITFP-PNSDEEKIMEIALEVGAEDV----TTNDDGSID-------VTT 175
Query: 260 TSDNYTDITTKLREAGI-PFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDDVDAV 318
+++ I ++ A + P + +L T + +D ++ E L L +LDDV V
Sbjct: 176 LPEDFEKIRNAMKAADLNPSHAE--VTVLASTEVGLDKDSAEQMLRLTEMLEDLDDVQNV 233
Query: 319 YTD 321
Y++
Sbjct: 234 YSN 236
>UNIPROTKB|Q2GGC4 [details] [associations]
symbol:ECH_0704 "Probable transcriptional regulatory
protein ECH_0704" species:205920 "Ehrlichia chaffeensis str.
Arkansas" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006351
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 Gene3D:3.30.1270.10 Gene3D:3.30.70.980
InterPro:IPR002876 InterPro:IPR026563 InterPro:IPR026564
PANTHER:PTHR12532 Pfam:PF01709 ProtClustDB:PRK00110
TIGRFAMs:TIGR01033 OMA:YLFDHVG RefSeq:YP_507509.1
ProteinModelPortal:Q2GGC4 STRING:Q2GGC4 GeneID:3927675
KEGG:ech:ECH_0704 PATRIC:20576856
BioCyc:ECHA205920:GJNR-706-MONOMER Uniprot:Q2GGC4
Length = 248
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 78/245 (31%), Positives = 134/245 (54%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I RKGAQDAK+A+ ++++ +E+I A K+G P+P N+ L + + AK+ ++PKD ++
Sbjct: 8 ANIKHRKGAQDAKRAQKFTKLIREIIVAAKQGLPDPEFNSRLRSAIIAAKKENLPKDRID 67
Query: 141 RNIKRASEKGQ-EAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
IK A+ Q + + E VYE YG G ++++++ LT+ R+ A +R + GK+ +
Sbjct: 68 AAIKSATGNTQTDNYEEVVYEGYGPGNIALMIQTLTNNRNRTAAELRHALSKYNGKLGES 127
Query: 200 GSVMFKFRRARVVNIKFTDADK-DQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVV 258
GSV F F V+ K + D D L + A++ A DV E + +DDT E + YY +
Sbjct: 128 GSVSFLFNHVGVIAYKASSIDSFDSLFNTAIELHALDVEE--IIQDDTQE---KIYYVIC 182
Query: 259 STSDNYTDITTKLREAGIPFETDNGSELL--PITTIEVDDEAMELNKELIAKLLELDDVD 316
+ D + ++ +L F S L T++++DE ++ + LLE +D D
Sbjct: 183 NVQD-FGNVRDQLFHK---FSDAEFSRLFWKASDTVKIEDEEIQKKISNLMDLLENND-D 237
Query: 317 AVYTD 321
Y D
Sbjct: 238 VQYID 242
>TIGR_CMR|ECH_0704 [details] [associations]
symbol:ECH_0704 "conserved hypothetical protein"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006351
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 Gene3D:3.30.1270.10 Gene3D:3.30.70.980
InterPro:IPR002876 InterPro:IPR026563 InterPro:IPR026564
PANTHER:PTHR12532 Pfam:PF01709 ProtClustDB:PRK00110
TIGRFAMs:TIGR01033 OMA:YLFDHVG RefSeq:YP_507509.1
ProteinModelPortal:Q2GGC4 STRING:Q2GGC4 GeneID:3927675
KEGG:ech:ECH_0704 PATRIC:20576856
BioCyc:ECHA205920:GJNR-706-MONOMER Uniprot:Q2GGC4
Length = 248
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 78/245 (31%), Positives = 134/245 (54%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I RKGAQDAK+A+ ++++ +E+I A K+G P+P N+ L + + AK+ ++PKD ++
Sbjct: 8 ANIKHRKGAQDAKRAQKFTKLIREIIVAAKQGLPDPEFNSRLRSAIIAAKKENLPKDRID 67
Query: 141 RNIKRASEKGQ-EAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
IK A+ Q + + E VYE YG G ++++++ LT+ R+ A +R + GK+ +
Sbjct: 68 AAIKSATGNTQTDNYEEVVYEGYGPGNIALMIQTLTNNRNRTAAELRHALSKYNGKLGES 127
Query: 200 GSVMFKFRRARVVNIKFTDADK-DQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVV 258
GSV F F V+ K + D D L + A++ A DV E + +DDT E + YY +
Sbjct: 128 GSVSFLFNHVGVIAYKASSIDSFDSLFNTAIELHALDVEE--IIQDDTQE---KIYYVIC 182
Query: 259 STSDNYTDITTKLREAGIPFETDNGSELL--PITTIEVDDEAMELNKELIAKLLELDDVD 316
+ D + ++ +L F S L T++++DE ++ + LLE +D D
Sbjct: 183 NVQD-FGNVRDQLFHK---FSDAEFSRLFWKASDTVKIEDEEIQKKISNLMDLLENND-D 237
Query: 317 AVYTD 321
Y D
Sbjct: 238 VQYID 242
>UNIPROTKB|Q0C5U8 [details] [associations]
symbol:HNE_0161 "Probable transcriptional regulatory
protein HNE_0161" species:228405 "Hyphomonas neptunium ATCC 15444"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 EMBL:CP000158 GenomeReviews:CP000158_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
TIGRFAMs:TIGR01033 RefSeq:YP_758895.1 ProteinModelPortal:Q0C5U8
STRING:Q0C5U8 GeneID:4287459 KEGG:hne:HNE_0161 PATRIC:32213110
BioCyc:HNEP228405:GI69-208-MONOMER Uniprot:Q0C5U8
Length = 252
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 78/242 (32%), Positives = 121/242 (50%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I RKG QD K+A L++R+ KE+ A K GGP+P N L + AK + VPKD ++
Sbjct: 8 ANIQHRKGKQDKKRAVLFARLSKEITVASKMGGPDPAMNPRLRLAITNAKGVSVPKDNIQ 67
Query: 141 RNIKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPG 200
R I + G + + YE G GGV I+VE TD R+ +R GG + G
Sbjct: 68 RAIDKGQSSGGADYADIRYEGVGPGGVGIIVEASTDNKNRAATDIRTAFSKNGGTLGTTG 127
Query: 201 SVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVST 260
SV F F + + + D++++ A+ AGA+DV NED + + +
Sbjct: 128 SVSFNFDQLGEIEYPVSAGSADEVMEAAIMAGAQDVES---NEDG---------HWIYTA 175
Query: 261 SDNYTDITTKLREA-GIPFETDNGSELL-P-ITTIEVDDEAMELNKELIAKLLELDDVDA 317
+++ ++T L + G E + + P +TT D A +L K ++ L ELDDV +
Sbjct: 176 REDFAAVSTALADTFGSKVEPTSAKIIWKPKVTTPIAGDAADQLMK-MLDVLDELDDVQS 234
Query: 318 VY 319
VY
Sbjct: 235 VY 236
>UNIPROTKB|Q3ABX7 [details] [associations]
symbol:CHY_1525 "Probable transcriptional regulatory
protein CHY_1525" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006351
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 RefSeq:YP_360357.1
ProteinModelPortal:Q3ABX7 SMR:Q3ABX7 STRING:Q3ABX7 GeneID:3728616
KEGG:chy:CHY_1525 PATRIC:21276179
BioCyc:CHYD246194:GJCN-1524-MONOMER Uniprot:Q3ABX7
Length = 244
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 73/246 (29%), Positives = 133/246 (54%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I RK D+ + K+++++ +E++ A + GG +P +N L A + +A+E ++P + ++
Sbjct: 8 ANIKHRKEKMDSLRGKVFTKLAREIMVAARLGGGDPEANPRLKAAIARAREANIPNENIQ 67
Query: 141 RNI-KRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
R I K E E++ E YE YG GGV+I+++++TD R+ +R + GG M +
Sbjct: 68 RAIMKGTGELAAESYEEVFYEGYGPGGVAILLKIMTDNRNRTAGEIRHLFSKHGGSMGEA 127
Query: 200 GSVMFKFRRARVVNIKFTD---ADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYK 256
GSV + F + I D +++++L + LDAGAED+ +D+ D+ ++
Sbjct: 128 GSVQWIFEEKGYITIPKEDNPGINEEEILLLVLDAGAEDL------KDEGDQ------FE 175
Query: 257 VVSTSDNYTDITTKLREAGIPFETDNGSELLPITTIEVD-DEAMELNKELIAKLLELDDV 315
V++ + + + L A I + +LP TT+ V +EA +L K L+ E DDV
Sbjct: 176 VITAPEAFEKVKDALNNANIKTSIAEIT-MLPKTTVPVSGEEAQKLLK-LLDLFEEHDDV 233
Query: 316 DAVYTD 321
VY +
Sbjct: 234 QEVYAN 239
>TIGR_CMR|CHY_1525 [details] [associations]
symbol:CHY_1525 "conserved hypothetical protein TIGR01033"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006351
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 OMA:PDGNPTL Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK00110 TIGRFAMs:TIGR01033 RefSeq:YP_360357.1
ProteinModelPortal:Q3ABX7 SMR:Q3ABX7 STRING:Q3ABX7 GeneID:3728616
KEGG:chy:CHY_1525 PATRIC:21276179
BioCyc:CHYD246194:GJCN-1524-MONOMER Uniprot:Q3ABX7
Length = 244
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 73/246 (29%), Positives = 133/246 (54%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I RK D+ + K+++++ +E++ A + GG +P +N L A + +A+E ++P + ++
Sbjct: 8 ANIKHRKEKMDSLRGKVFTKLAREIMVAARLGGGDPEANPRLKAAIARAREANIPNENIQ 67
Query: 141 RNI-KRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
R I K E E++ E YE YG GGV+I+++++TD R+ +R + GG M +
Sbjct: 68 RAIMKGTGELAAESYEEVFYEGYGPGGVAILLKIMTDNRNRTAGEIRHLFSKHGGSMGEA 127
Query: 200 GSVMFKFRRARVVNIKFTD---ADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYK 256
GSV + F + I D +++++L + LDAGAED+ +D+ D+ ++
Sbjct: 128 GSVQWIFEEKGYITIPKEDNPGINEEEILLLVLDAGAEDL------KDEGDQ------FE 175
Query: 257 VVSTSDNYTDITTKLREAGIPFETDNGSELLPITTIEVD-DEAMELNKELIAKLLELDDV 315
V++ + + + L A I + +LP TT+ V +EA +L K L+ E DDV
Sbjct: 176 VITAPEAFEKVKDALNNANIKTSIAEIT-MLPKTTVPVSGEEAQKLLK-LLDLFEEHDDV 233
Query: 316 DAVYTD 321
VY +
Sbjct: 234 QEVYAN 239
>UNIPROTKB|E2RFJ8 [details] [associations]
symbol:TACO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0005739 Gene3D:1.10.10.200 InterPro:IPR017856
Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 GeneTree:ENSGT00390000012820 OMA:NAKAENM
EMBL:AAEX03006356 RefSeq:XP_003639299.1 ProteinModelPortal:E2RFJ8
Ensembl:ENSCAFT00000020545 GeneID:100856685 KEGG:cfa:100856685
NextBio:20896251 Uniprot:E2RFJ8
Length = 298
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 76/264 (28%), Positives = 138/264 (52%)
Query: 66 RTIRTFAPVCMGRRS-SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAA 124
RT+ A V G SK+ KG +DA++++++S++ + AVK+GGPNP N+ LA
Sbjct: 49 RTLHLTAAVPAGHNKWSKVRHIKGPKDAERSRIFSKLCLSIRLAVKEGGPNPELNSSLAN 108
Query: 125 VLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAA 184
+LE + +PK +E ++K K ++ ++ +YE G GG S+++E L++ ++ +
Sbjct: 109 ILEVCRSKHMPKSTIEASLKM--RKAKDVYL--LYEGRGPGGSSLLIEALSNSGSKCYSD 164
Query: 185 VREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADK-----DQLLDIALDAGAEDVIEP 239
+R ++ GG MAD F + V+ + D +K ++ L++A++AGAEDV E
Sbjct: 165 IRHILNKNGGMMAD--GARHSFDKKGVIMVGVEDREKKAVNLERALELAIEAGAEDVKE- 221
Query: 240 PVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAM 299
T+++ + +K + + + + KL G+ E +P T +++ D +
Sbjct: 222 ------TEDEEEKNVFKFICDASSLHQVRKKLDSLGL-CSVSCSLEFIPNTKVQLADADL 274
Query: 300 ELNKELIAKLLELDDVDAVYTDQI 323
E LI L +DV VY D I
Sbjct: 275 EQAALLIQALGNHEDVIQVY-DNI 297
>UNIPROTKB|E1BJK7 [details] [associations]
symbol:TACO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] HAMAP:MF_00693
GO:GO:0005739 Gene3D:1.10.10.200 InterPro:IPR017856 CTD:51204
OMA:PDGNPTL Gene3D:3.30.1270.10 Gene3D:3.30.70.980
InterPro:IPR002876 InterPro:IPR026563 InterPro:IPR026564
PANTHER:PTHR12532 Pfam:PF01709 GeneTree:ENSGT00390000012820
EMBL:DAAA02049321 IPI:IPI00694593 RefSeq:NP_001192540.1
UniGene:Bt.112060 ProteinModelPortal:E1BJK7
Ensembl:ENSBTAT00000013031 GeneID:507536 KEGG:bta:507536
NextBio:20868111 Uniprot:E1BJK7
Length = 297
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 76/264 (28%), Positives = 138/264 (52%)
Query: 66 RTIRTFAPVCMGRRS-SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAA 124
RT+ A V G SK+ KG +DA++++++S++ + AVK+GGPNP N+ LA+
Sbjct: 48 RTLHLTAEVPAGHNKWSKVRHIKGPKDAERSRIFSKLSLSIRLAVKEGGPNPELNSNLAS 107
Query: 125 VLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAA 184
+LE + +PK +E +K EK ++ ++ +YE G GG S+++E L++ ++ +
Sbjct: 108 ILEVCRSKHMPKSTIEAALKM--EKTKDMYL--LYEGRGPGGSSLLIEALSNSSSKCHSD 163
Query: 185 VREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADK-----DQLLDIALDAGAEDVIEP 239
++ ++ GG MA+ F + V+ + D +K ++ L++A++AGAEDV E
Sbjct: 164 IKHILNKNGGMMAE--GARHSFDKKGVIVVGEEDREKKPVNLERALELAIEAGAEDVAE- 220
Query: 240 PVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAM 299
T+++ + +K + + + + KL G+ E +P T + + D +
Sbjct: 221 ------TEDEEEKNIFKFICDASSLHQVRKKLDSLGL-CSVSCTLEFIPNTKVRLADPDL 273
Query: 300 ELNKELIAKLLELDDVDAVYTDQI 323
E LI L DDV VY D I
Sbjct: 274 EQAAHLIQALGNHDDVIHVY-DNI 296
>UNIPROTKB|F1RRW7 [details] [associations]
symbol:TACO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] HAMAP:MF_00693
GO:GO:0005739 Gene3D:1.10.10.200 InterPro:IPR017856 OMA:PDGNPTL
Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 GeneTree:ENSGT00390000012820 EMBL:CU929939
Ensembl:ENSSSCT00000018825 Uniprot:F1RRW7
Length = 294
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 78/264 (29%), Positives = 141/264 (53%)
Query: 66 RTIRTFAPVCMGRRS-SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAA 124
R + A V G SK+ KG +D ++++++S++ + AVK+GGPNP N+ LA+
Sbjct: 45 RMLHVTAAVPAGHNKWSKVRHIKGPKDTERSRIFSKLSLSIRLAVKEGGPNPDLNSNLAS 104
Query: 125 VLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAA 184
+LE + +PK +E +K EK ++ I +YE G GG S+++E L++ ++ ++
Sbjct: 105 ILEVCRSKHMPKSTMEAALKM--EKTKD--IHLLYEGRGPGGSSLLIEALSNSGSKCLSD 160
Query: 185 VREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADK-----DQLLDIALDAGAEDVIEP 239
++ ++ GG MA+ G+ F F + V+ + D +K ++ L++A++AGAEDV E
Sbjct: 161 IKHILNKNGGMMAE-GARHF-FDKKGVIVVGVEDREKKAVNLERALELAIEAGAEDVKE- 217
Query: 240 PVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAM 299
T+++ + +K V + + + KL G+ + E +P T +++ D +
Sbjct: 218 ------TEDEEEKNIFKFVCDASSLHQVRKKLDSLGLCCVSCM-LEFIPNTKVQLADPEL 270
Query: 300 ELNKELIAKLLELDDVDAVYTDQI 323
E LI L DDV VY D I
Sbjct: 271 EQAAHLIQALSNHDDVIHVY-DNI 293
>RGD|1306784 [details] [associations]
symbol:Taco1 "translational activator of mitochondrially encoded
cytochrome c oxidase I" species:10116 "Rattus norvegicus"
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006417
"regulation of translation" evidence=IEA] RGD:1306784 GO:GO:0005739
GO:GO:0006417 EMBL:CH473948 Gene3D:1.10.10.200 InterPro:IPR017856
CTD:51204 Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 EMBL:BC166900 IPI:IPI00195878 RefSeq:NP_001101772.1
UniGene:Rn.137785 ProteinModelPortal:B2RYT9 GeneID:360645
KEGG:rno:360645 UCSC:RGD:1306784 NextBio:673599 Uniprot:B2RYT9
Length = 295
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 77/264 (29%), Positives = 140/264 (53%)
Query: 66 RTIRTFAPVCMGRRS-SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAA 124
RT+R A G SK+ KG +D ++++++S++ + AVK+GGPNP +N+ LA
Sbjct: 45 RTLRVSAVAFAGHNKWSKVRHIKGPKDMERSRIFSKLTLSIRLAVKEGGPNPENNSSLAN 104
Query: 125 VLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAA 184
+LE + ++PK +E +K SEK + ++ +YE G GG S+++E L++ +
Sbjct: 105 ILEVCRSKNMPKSTIESALK--SEKNKGIYL--LYEGRGPGGSSLLIEALSNSGPKCHLE 160
Query: 185 VREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADK-----DQLLDIALDAGAEDVIEP 239
++ ++ GG M + G+ F F + VV + D +K ++ L++A++AGAEDV E
Sbjct: 161 IKYILNKNGGMMTE-GARHF-FDKKGVVVVGVEDREKKAVNLERALELAIEAGAEDVREA 218
Query: 240 PVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAM 299
ED+ +E + +K + + + + KL G+ E +P + +++ + +
Sbjct: 219 ---EDEEEE---KNLFKFICDASSLHQVRKKLDSLGL-CSVSCSLEFIPHSKVQLSEPEL 271
Query: 300 ELNKELIAKLLELDDVDAVYTDQI 323
E LI L +DV VY D I
Sbjct: 272 EQAVHLIQALSNHEDVIHVY-DNI 294
>UNIPROTKB|Q9BSH4 [details] [associations]
symbol:TACO1 "Translational activator of cytochrome c
oxidase 1" species:9606 "Homo sapiens" [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] GO:GO:0005739 GO:GO:0006417 EMBL:CH471109 MIM:256000
Orphanet:70474 Gene3D:1.10.10.200 InterPro:IPR017856 EMBL:AK315375
EMBL:BC005049 EMBL:BC007744 EMBL:AL833861 EMBL:AF090929
IPI:IPI00019903 RefSeq:NP_057444.2 UniGene:Hs.174134
ProteinModelPortal:Q9BSH4 SMR:Q9BSH4 IntAct:Q9BSH4
MINT:MINT-1460586 STRING:Q9BSH4 PhosphoSite:Q9BSH4 DMDM:33516968
PaxDb:Q9BSH4 PeptideAtlas:Q9BSH4 PRIDE:Q9BSH4 DNASU:51204
Ensembl:ENST00000258975 GeneID:51204 KEGG:hsa:51204 UCSC:uc002jbd.3
CTD:51204 GeneCards:GC17P061678 HGNC:HGNC:24316 HPA:HPA021626
HPA:HPA021643 HPA:HPA024294 MIM:612958 neXtProt:NX_Q9BSH4
PharmGKB:PA165433031 eggNOG:COG0217 HOGENOM:HOG000228370
InParanoid:Q9BSH4 OMA:PDGNPTL OrthoDB:EOG4D26QM PhylomeDB:Q9BSH4
GenomeRNAi:51204 NextBio:54250 ArrayExpress:Q9BSH4 Bgee:Q9BSH4
CleanEx:HS_CCDC44 Genevestigator:Q9BSH4 GermOnline:ENSG00000136463
Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 Uniprot:Q9BSH4
Length = 297
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 78/264 (29%), Positives = 139/264 (52%)
Query: 66 RTIRTFAPVCMGRRS-SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAA 124
RT+ A V G SK+ KG +D ++++++S++ + AVK+GGPNP N+ LA
Sbjct: 48 RTLHFTAAVPAGHNKWSKVRHIKGPKDVERSRIFSKLCLNIRLAVKEGGPNPEHNSNLAN 107
Query: 125 VLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAA 184
+LE + +PK +E +K EK ++ ++ +YE G GG S+++E L++ + A
Sbjct: 108 ILEVCRSKHMPKSTIETALKM--EKSKDTYL--LYEGRGPGGSSLLIEALSNSSHKCQAD 163
Query: 185 VREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADK-----DQLLDIALDAGAEDVIEP 239
+R ++ GG MA G+ F + V+ ++ D +K ++ L++A++AGAEDV E
Sbjct: 164 IRHILNKNGGVMA-VGA-RHSFDKKGVIVVEVEDREKKAVNLERALEMAIEAGAEDVKE- 220
Query: 240 PVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAM 299
ED+ E+R +K + + + + KL G+ E +P + +++ + +
Sbjct: 221 --TEDE--EER--NVFKFICDASSLHQVRKKLDSLGL-CSVSCALEFIPNSKVQLAEPDL 273
Query: 300 ELNKELIAKLLELDDVDAVYTDQI 323
E LI L +DV VY D I
Sbjct: 274 EQAAHLIQALSNHEDVIHVY-DNI 296
>MGI|MGI:1917457 [details] [associations]
symbol:Taco1 "translational activator of mitochondrially
encoded cytochrome c oxidase I" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] MGI:MGI:1917457 GO:GO:0005739 GO:GO:0006417
EMBL:AL596331 Gene3D:1.10.10.200 InterPro:IPR017856 CTD:51204
eggNOG:COG0217 HOGENOM:HOG000228370 OMA:PDGNPTL OrthoDB:EOG4D26QM
Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 EMBL:AK010072 EMBL:AK047078 EMBL:AK140143
EMBL:AK167963 EMBL:BC029182 IPI:IPI00137601 RefSeq:NP_081622.1
UniGene:Mm.343857 ProteinModelPortal:Q8K0Z7 SMR:Q8K0Z7
STRING:Q8K0Z7 PhosphoSite:Q8K0Z7 PaxDb:Q8K0Z7 PRIDE:Q8K0Z7
Ensembl:ENSMUST00000002048 GeneID:70207 KEGG:mmu:70207
UCSC:uc007lyb.1 GeneTree:ENSGT00390000012820 InParanoid:Q3TI86
NextBio:331168 Bgee:Q8K0Z7 CleanEx:MM_CCDC44 Genevestigator:Q8K0Z7
Uniprot:Q8K0Z7
Length = 294
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 76/264 (28%), Positives = 137/264 (51%)
Query: 66 RTIRTFAPVCMGRRS-SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAA 124
RT+ A G SK+ KG +D ++++++S++ + AVK+GGPNP +N+ LA
Sbjct: 45 RTLHVSATASAGHNKWSKVRHIKGPKDMERSRIFSKLTLSIRLAVKEGGPNPENNSSLAN 104
Query: 125 VLEKAKELDVPKDIVERNIKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAA 184
+LE + ++PK +E +K KG I +YE G GG S+++E L++ +
Sbjct: 105 ILELCRSKNMPKSTIESALKTEKNKG----IYLLYEGRGPGGSSLLIEALSNSGPKCHLD 160
Query: 185 VREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADK-----DQLLDIALDAGAEDVIEP 239
++ ++ GG MA+ G+ F F + VV + D +K ++ L++A++AGAEDV E
Sbjct: 161 IKYILNKNGGMMAE-GARHF-FDKKGVVVVGVEDREKKAVNLERALELAIEAGAEDVKEA 218
Query: 240 PVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAM 299
ED+ +++ +K + + + + KL G+ E +P + +++ + +
Sbjct: 219 ---EDEEEKN----LFKFICDASSLHQVRKKLDSLGL-CPVSCSMEFIPHSKVQLAEPEL 270
Query: 300 ELNKELIAKLLELDDVDAVYTDQI 323
E LI L +DV VY D I
Sbjct: 271 EQAAHLIQALNNYEDVIHVY-DNI 293
>UNIPROTKB|Q2GKM2 [details] [associations]
symbol:APH_0480 "Probable transcriptional regulatory
protein APH_0480" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 EMBL:CP000235 GenomeReviews:CP000235_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 Gene3D:3.30.1270.10 Gene3D:3.30.70.980
InterPro:IPR002876 InterPro:IPR026563 InterPro:IPR026564
PANTHER:PTHR12532 Pfam:PF01709 ProtClustDB:PRK00110
TIGRFAMs:TIGR01033 RefSeq:YP_505079.1 ProteinModelPortal:Q2GKM2
STRING:Q2GKM2 GeneID:3930251 KEGG:aph:APH_0480 PATRIC:20949596
OMA:YLFDHVG BioCyc:APHA212042:GHPM-506-MONOMER Uniprot:Q2GKM2
Length = 245
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 75/240 (31%), Positives = 119/240 (49%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I RKGAQDAK+AKL++++ KE+I A + G P P N L + + AK ++PKD +E
Sbjct: 8 ANIKHRKGAQDAKRAKLFTKLRKEIIVAARSGSPVPELNPNLRSAIASAKAFNLPKDRIE 67
Query: 141 RNIKRAS-EKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
I+ A + +++ E YE YG G V+IVV L++ R+ +R + GGK+ +
Sbjct: 68 AAIRSAQGNEADDSYEEITYEGYGPGSVAIVVHALSNNRNRTAGELRHIFTRHGGKLGER 127
Query: 200 GSVMFKFRRARVVNIKFTDADK-DQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVV 258
GS+ + F ++ D + D A GA D+ E D E E+ Y V+
Sbjct: 128 GSISYLFDHVGLIVYGAAQVGSFDVIFDEATSLGAIDL-----EEHDNGE---EKEYHVI 179
Query: 259 STSDNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDDVDAV 318
+++ I L E F + L +V + E + +LI+ L +LDD D V
Sbjct: 180 CQVEDFGRIRDALYEK---FSDGVTARLSWRPKQKVKPASDEASAKLISFLNDLDDNDDV 236
>UNIPROTKB|Q8EBU8 [details] [associations]
symbol:SO_3401 "Probable transcriptional regulatory protein
SO_3401" species:211586 "Shewanella oneidensis MR-1" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 HOGENOM:HOG000228371 ProtClustDB:PRK12378 OMA:QFHAVQE
RefSeq:NP_718954.1 ProteinModelPortal:Q8EBU8 GeneID:1171077
KEGG:son:SO_3401 PATRIC:23526476 Uniprot:Q8EBU8
Length = 240
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 75/246 (30%), Positives = 118/246 (47%)
Query: 76 MGRRSSKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVP 135
MGR +K +LYSR GKE+ K+GG P N L ++E+AK+ VP
Sbjct: 1 MGRAYQNRKESMAKTAGQKTRLYSRYGKEIYVVAKQGGVEPDGNLSLRRLIERAKKDQVP 60
Query: 136 KDIVERNIKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGK 195
++ER I +A G E + YE +G G ++V+ LTD + R+ VR+ K
Sbjct: 61 AHVIERAIDKAKGGGGEDYDTARYEGFGPGNCMVIVDCLTDNVKRTFTEVRQAFVKNDAK 120
Query: 196 MADPGSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYY 255
+ PG+V F ++ V F D+D +L+I + A DV VN+ + ++
Sbjct: 121 LGTPGTVGHMFDQSAV--FVFPGEDEDAILEILMMA---DV---DVNDVEVEDGMIS--- 169
Query: 256 KVVSTSDNYTDITTKLREA--GIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELD 313
V++ + + T L +A I FE +N + +P T V E + + + IA L + D
Sbjct: 170 -VIAPHTEFFKVKTALTDAMPDINFEVENIT-FVPQTMTPVSGEDVAVFDKFIAALEDCD 227
Query: 314 DVDAVY 319
DV VY
Sbjct: 228 DVQNVY 233
>TIGR_CMR|APH_0480 [details] [associations]
symbol:APH_0480 "conserved hypothetical protein TIGR01033"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:CP000235 GenomeReviews:CP000235_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 Gene3D:3.30.1270.10 Gene3D:3.30.70.980
InterPro:IPR002876 InterPro:IPR026563 InterPro:IPR026564
PANTHER:PTHR12532 Pfam:PF01709 ProtClustDB:PRK00110
TIGRFAMs:TIGR01033 RefSeq:YP_505079.1 ProteinModelPortal:Q2GKM2
STRING:Q2GKM2 GeneID:3930251 KEGG:aph:APH_0480 PATRIC:20949596
OMA:YLFDHVG BioCyc:APHA212042:GHPM-506-MONOMER Uniprot:Q2GKM2
Length = 245
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 75/240 (31%), Positives = 119/240 (49%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I RKGAQDAK+AKL++++ KE+I A + G P P N L + + AK ++PKD +E
Sbjct: 8 ANIKHRKGAQDAKRAKLFTKLRKEIIVAARSGSPVPELNPNLRSAIASAKAFNLPKDRIE 67
Query: 141 RNIKRAS-EKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
I+ A + +++ E YE YG G V+IVV L++ R+ +R + GGK+ +
Sbjct: 68 AAIRSAQGNEADDSYEEITYEGYGPGSVAIVVHALSNNRNRTAGELRHIFTRHGGKLGER 127
Query: 200 GSVMFKFRRARVVNIKFTDADK-DQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVV 258
GS+ + F ++ D + D A GA D+ E D E E+ Y V+
Sbjct: 128 GSISYLFDHVGLIVYGAAQVGSFDVIFDEATSLGAIDL-----EEHDNGE---EKEYHVI 179
Query: 259 STSDNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDDVDAV 318
+++ I L E F + L +V + E + +LI+ L +LDD D V
Sbjct: 180 CQVEDFGRIRDALYEK---FSDGVTARLSWRPKQKVKPASDEASAKLISFLNDLDDNDDV 236
>TIGR_CMR|SO_3401 [details] [associations]
symbol:SO_3401 "conserved hypothetical protein TIGR01033"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 HOGENOM:HOG000228371 ProtClustDB:PRK12378 OMA:QFHAVQE
RefSeq:NP_718954.1 ProteinModelPortal:Q8EBU8 GeneID:1171077
KEGG:son:SO_3401 PATRIC:23526476 Uniprot:Q8EBU8
Length = 240
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 75/246 (30%), Positives = 118/246 (47%)
Query: 76 MGRRSSKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVP 135
MGR +K +LYSR GKE+ K+GG P N L ++E+AK+ VP
Sbjct: 1 MGRAYQNRKESMAKTAGQKTRLYSRYGKEIYVVAKQGGVEPDGNLSLRRLIERAKKDQVP 60
Query: 136 KDIVERNIKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGK 195
++ER I +A G E + YE +G G ++V+ LTD + R+ VR+ K
Sbjct: 61 AHVIERAIDKAKGGGGEDYDTARYEGFGPGNCMVIVDCLTDNVKRTFTEVRQAFVKNDAK 120
Query: 196 MADPGSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYY 255
+ PG+V F ++ V F D+D +L+I + A DV VN+ + ++
Sbjct: 121 LGTPGTVGHMFDQSAV--FVFPGEDEDAILEILMMA---DV---DVNDVEVEDGMIS--- 169
Query: 256 KVVSTSDNYTDITTKLREA--GIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELD 313
V++ + + T L +A I FE +N + +P T V E + + + IA L + D
Sbjct: 170 -VIAPHTEFFKVKTALTDAMPDINFEVENIT-FVPQTMTPVSGEDVAVFDKFIAALEDCD 227
Query: 314 DVDAVY 319
DV VY
Sbjct: 228 DVQNVY 233
>UNIPROTKB|Q5HTU2 [details] [associations]
symbol:CJE1306 "Probable transcriptional regulatory protein
CJE1306" species:195099 "Campylobacter jejuni RM1221" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:CP000025 GenomeReviews:CP000025_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 Gene3D:3.30.1270.10 Gene3D:3.30.70.980
InterPro:IPR002876 InterPro:IPR026563 InterPro:IPR026564
PANTHER:PTHR12532 Pfam:PF01709 TIGRFAMs:TIGR01033
RefSeq:YP_179293.1 ProteinModelPortal:Q5HTU2 SMR:Q5HTU2
STRING:Q5HTU2 GeneID:3231813 KEGG:cjr:CJE1306 PATRIC:20044412
OMA:NAKAENM ProtClustDB:PRK12378
BioCyc:CJEJ195099:GJC0-1332-MONOMER Uniprot:Q5HTU2
Length = 235
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 77/251 (30%), Positives = 133/251 (52%)
Query: 76 MGRRSSKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVP 135
MGR K A+ K +KL+ ++ K + A K+GG +P N L + + AK ++P
Sbjct: 1 MGRAFEYRRASKEARWDKMSKLFPKLAKAIQVAAKEGGTDPDMNPKLRSAIATAKANNMP 60
Query: 136 KDIVERNIKRASEKGQEAFIEKV-YEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGG 194
KD ++ IKRAS K A I+ + YE G ++VE ++D TR+VA V+ + GG
Sbjct: 61 KDNIDAAIKRASGK-DSADIKNIHYEGKAAHGALVIVECMSDNPTRTVANVKAIFSKNGG 119
Query: 195 KMADPGSVMFKFRRARVVNIKFTDADKDQL-LDIALDAGAEDVIEPPVNEDDTDEDRAER 253
++ GS+ F F R V +++ D ++L LD+ +DAG E++ + NE++
Sbjct: 120 EVLQNGSLGFMFTRKAVFHLEKFAGDLEELELDL-IDAGLEELEQ---NEEEL------- 168
Query: 254 YYKVVSTSDNYT---DITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLL 310
V+S +YT ++++ + G+ + G E +P + +E + ++L+ KL
Sbjct: 169 ---VIS--GDYTAFGELSSAIEAKGLVLKKA-GLEYIPNNPVSFSEEQLSDIEKLLDKLE 222
Query: 311 ELDDVDAVYTD 321
+ DDV AVYT+
Sbjct: 223 DDDDVQAVYTN 233
>TIGR_CMR|CJE_1306 [details] [associations]
symbol:CJE_1306 "conserved hypothetical protein TIGR01033"
species:195099 "Campylobacter jejuni RM1221" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:CP000025 GenomeReviews:CP000025_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 Gene3D:3.30.1270.10 Gene3D:3.30.70.980
InterPro:IPR002876 InterPro:IPR026563 InterPro:IPR026564
PANTHER:PTHR12532 Pfam:PF01709 TIGRFAMs:TIGR01033
RefSeq:YP_179293.1 ProteinModelPortal:Q5HTU2 SMR:Q5HTU2
STRING:Q5HTU2 GeneID:3231813 KEGG:cjr:CJE1306 PATRIC:20044412
OMA:NAKAENM ProtClustDB:PRK12378
BioCyc:CJEJ195099:GJC0-1332-MONOMER Uniprot:Q5HTU2
Length = 235
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 77/251 (30%), Positives = 133/251 (52%)
Query: 76 MGRRSSKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVP 135
MGR K A+ K +KL+ ++ K + A K+GG +P N L + + AK ++P
Sbjct: 1 MGRAFEYRRASKEARWDKMSKLFPKLAKAIQVAAKEGGTDPDMNPKLRSAIATAKANNMP 60
Query: 136 KDIVERNIKRASEKGQEAFIEKV-YEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGG 194
KD ++ IKRAS K A I+ + YE G ++VE ++D TR+VA V+ + GG
Sbjct: 61 KDNIDAAIKRASGK-DSADIKNIHYEGKAAHGALVIVECMSDNPTRTVANVKAIFSKNGG 119
Query: 195 KMADPGSVMFKFRRARVVNIKFTDADKDQL-LDIALDAGAEDVIEPPVNEDDTDEDRAER 253
++ GS+ F F R V +++ D ++L LD+ +DAG E++ + NE++
Sbjct: 120 EVLQNGSLGFMFTRKAVFHLEKFAGDLEELELDL-IDAGLEELEQ---NEEEL------- 168
Query: 254 YYKVVSTSDNYT---DITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLL 310
V+S +YT ++++ + G+ + G E +P + +E + ++L+ KL
Sbjct: 169 ---VIS--GDYTAFGELSSAIEAKGLVLKKA-GLEYIPNNPVSFSEEQLSDIEKLLDKLE 222
Query: 311 ELDDVDAVYTD 321
+ DDV AVYT+
Sbjct: 223 DDDDVQAVYTN 233
>POMBASE|SPBC8D2.12c [details] [associations]
symbol:SPBC8D2.12c "mitochondrial translational
activator of cytochrome C oxidase I (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005739 "mitochondrion" evidence=ISS;IDA]
[GO:0008150 "biological_process" evidence=ND] PomBase:SPBC8D2.12c
GO:GO:0005739 EMBL:CU329671 EMBL:AB004538 Gene3D:1.10.10.200
InterPro:IPR017856 eggNOG:COG0217 HOGENOM:HOG000228370
Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 HSSP:O67517 OMA:DEHETRI OrthoDB:EOG4WT0M3 PIR:T40757
RefSeq:NP_595574.1 ProteinModelPortal:O43075 STRING:O43075
PRIDE:O43075 EnsemblFungi:SPBC8D2.12c.1 GeneID:2541235
KEGG:spo:SPBC8D2.12c NextBio:20802347 Uniprot:O43075
Length = 293
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 75/270 (27%), Positives = 136/270 (50%)
Query: 53 IPLYEVKHCNFQVRTIRTFAPVCMGRRS-SKIAGRKGAQDAKKAKLYSRMGKEVISAVKK 111
IP + + R+ T + G SKI +K A D ++ ++ + +I AV++
Sbjct: 7 IPFTRALYHFSRFRSFTTSGWIMSGHNKWSKIKHKKSANDQARSLQIGKLSQGIILAVRQ 66
Query: 112 GGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRA-----SEKGQEAFIEKVYEVYGYGG 166
G NP N LA +LE AK++ +PK +E I R SE Q FIE YE G
Sbjct: 67 EGANPELNMRLATLLESAKKISMPKSGIENAINRGLGTAGSEGSQVHFIE--YEAMHPSG 124
Query: 167 VSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMFKF-RRARV-VNI--KFTDADK- 221
V ++VE +TD R+ ++++ ++++ G ++ +V F F ++ +V VN+ + D+ K
Sbjct: 125 VGLIVEAVTDNRARAASSIKHILRNHGASLS---TVKFLFSKKGKVEVNLPPEKRDSMKF 181
Query: 222 DQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETD 281
+ +LD A++AGAED++ P D +ED E + +++ + + R + D
Sbjct: 182 EDVLDDAIEAGAEDIVNRPKEYID-EEDEGE--FLILTEPSSLNQVAHHFRSKNYEIK-D 237
Query: 282 NGSELLPITTIEVDDEAMELNKELIAKLLE 311
+ +P+ +D A + +E I KL++
Sbjct: 238 SRLIHIPLEETAIDVPAKDSVREDIQKLID 267
>UNIPROTKB|Q47WK1 [details] [associations]
symbol:CPS_4169 "Probable transcriptional regulatory
protein CPS_4169" species:167879 "Colwellia psychrerythraea 34H"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 EMBL:CP000083 GenomeReviews:CP000083_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 HOGENOM:HOG000228371 ProtClustDB:PRK12378 OMA:QFHAVQE
RefSeq:YP_270821.1 ProteinModelPortal:Q47WK1 STRING:Q47WK1
GeneID:3521496 KEGG:cps:CPS_4169 PATRIC:21471199
BioCyc:CPSY167879:GI48-4179-MONOMER Uniprot:Q47WK1
Length = 241
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 74/249 (29%), Positives = 121/249 (48%)
Query: 76 MGR--RSSKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELD 133
MGR ++ K++ K A K K+YS+ GK + K GG +P N L ++++AK+
Sbjct: 1 MGRAYQNRKLSMAKTA--GAKTKVYSKYGKAIYVCAKTGGIDPDGNLSLRGLIDRAKKDQ 58
Query: 134 VPKDIVERNIKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCG 193
VP +++ IK+AS G E F+E YE YG G ++++ LTD R++ VR+
Sbjct: 59 VPTHVIDNAIKKASGAGGEDFVEARYEGYGPGNCMVIIDCLTDNGNRTIKDVRQCFSKNH 118
Query: 194 GKMADPGSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAER 253
K+ GSV F V F D + +L+ + A D+ D TD + +
Sbjct: 119 AKIGTSGSVSHMFDHQAV--FAFKGEDDEAVLETLMMA---DI-------DVTDVELEDG 166
Query: 254 YYKVVSTSDNYTDITTKLREAGIPFETDNGSEL--LPITTIEVD-DEAMELNKELIAKLL 310
V + + I T+ + +E + EL +P I+V+ +E +E ++ IA L
Sbjct: 167 IITVYAPHTEFFKIKTEFTNSMPEYELEI-EELSWVPQNYIDVEGEENLENFEKFIAMLD 225
Query: 311 ELDDVDAVY 319
+ DDV VY
Sbjct: 226 DCDDVQHVY 234
>TIGR_CMR|CPS_4169 [details] [associations]
symbol:CPS_4169 "conserved hypothetical protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:CP000083 GenomeReviews:CP000083_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 HOGENOM:HOG000228371 ProtClustDB:PRK12378 OMA:QFHAVQE
RefSeq:YP_270821.1 ProteinModelPortal:Q47WK1 STRING:Q47WK1
GeneID:3521496 KEGG:cps:CPS_4169 PATRIC:21471199
BioCyc:CPSY167879:GI48-4179-MONOMER Uniprot:Q47WK1
Length = 241
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 74/249 (29%), Positives = 121/249 (48%)
Query: 76 MGR--RSSKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELD 133
MGR ++ K++ K A K K+YS+ GK + K GG +P N L ++++AK+
Sbjct: 1 MGRAYQNRKLSMAKTA--GAKTKVYSKYGKAIYVCAKTGGIDPDGNLSLRGLIDRAKKDQ 58
Query: 134 VPKDIVERNIKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCG 193
VP +++ IK+AS G E F+E YE YG G ++++ LTD R++ VR+
Sbjct: 59 VPTHVIDNAIKKASGAGGEDFVEARYEGYGPGNCMVIIDCLTDNGNRTIKDVRQCFSKNH 118
Query: 194 GKMADPGSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAER 253
K+ GSV F V F D + +L+ + A D+ D TD + +
Sbjct: 119 AKIGTSGSVSHMFDHQAV--FAFKGEDDEAVLETLMMA---DI-------DVTDVELEDG 166
Query: 254 YYKVVSTSDNYTDITTKLREAGIPFETDNGSEL--LPITTIEVD-DEAMELNKELIAKLL 310
V + + I T+ + +E + EL +P I+V+ +E +E ++ IA L
Sbjct: 167 IITVYAPHTEFFKIKTEFTNSMPEYELEI-EELSWVPQNYIDVEGEENLENFEKFIAMLD 225
Query: 311 ELDDVDAVY 319
+ DDV VY
Sbjct: 226 DCDDVQHVY 234
>UNIPROTKB|Q9KNF8 [details] [associations]
symbol:VC_A0006 "Probable transcriptional regulatory
protein VC_A0006" species:243277 "Vibrio cholerae O1 biovar El Tor
str. N16961" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00693 GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 EMBL:AE003853
GenomeReviews:AE003853_GR Gene3D:1.10.10.200 InterPro:IPR017856
eggNOG:COG0217 Gene3D:3.30.1270.10 Gene3D:3.30.70.980
InterPro:IPR002876 InterPro:IPR026563 InterPro:IPR026564
PANTHER:PTHR12532 Pfam:PF01709 ProtClustDB:PRK12378 PIR:G82512
RefSeq:NP_232407.1 ProteinModelPortal:Q9KNF8 DNASU:2612229
GeneID:2612229 KEGG:vch:VCA0006 PATRIC:20084607 OMA:QFHAVQE
Uniprot:Q9KNF8
Length = 239
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 75/250 (30%), Positives = 117/250 (46%)
Query: 76 MGR----RSSKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKE 131
MGR R + +A +GA K K+YS+ GKE+ K GG +P N L ++ KAK+
Sbjct: 1 MGRSFEVRKASMAKTQGA----KIKVYSKYGKEIYVCAKNGGTDPDMNLSLRHLITKAKK 56
Query: 132 LDVPKDIVERNIKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKD 191
VP ++E+ + +AS E + YE +G GG S++V+ LTD R+ VR+
Sbjct: 57 DQVPAHVIEKALDKASGGAGEDYQPARYEGFGPGGASVIVDCLTDNGNRTYQDVRQCFVK 116
Query: 192 CGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRA 251
G K+ PG V F V +F D++ +L+ + A AE TD +
Sbjct: 117 TGAKIGTPGVVAHMFDHQAV--FQFQGDDEEAILEALMMADAEV----------TDIEHE 164
Query: 252 ERYYKVVSTSDNYTDITTKLREAGIPFETDNGSEL--LPITTIEVDDEAMELNKELIAKL 309
+ V + + + + T L EA P T + E+ +P V E E ++ + L
Sbjct: 165 DGVITVFAPNTEFFKVKTALNEA-FPDLTLDVEEITFVPQNRTVVSGEDAEKFQKFLDML 223
Query: 310 LELDDVDAVY 319
+ DDV VY
Sbjct: 224 DDCDDVQQVY 233
>TIGR_CMR|VC_A0006 [details] [associations]
symbol:VC_A0006 "conserved hypothetical protein"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:AE003853 GenomeReviews:AE003853_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 ProtClustDB:PRK12378 PIR:G82512 RefSeq:NP_232407.1
ProteinModelPortal:Q9KNF8 DNASU:2612229 GeneID:2612229
KEGG:vch:VCA0006 PATRIC:20084607 OMA:QFHAVQE Uniprot:Q9KNF8
Length = 239
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 75/250 (30%), Positives = 117/250 (46%)
Query: 76 MGR----RSSKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKE 131
MGR R + +A +GA K K+YS+ GKE+ K GG +P N L ++ KAK+
Sbjct: 1 MGRSFEVRKASMAKTQGA----KIKVYSKYGKEIYVCAKNGGTDPDMNLSLRHLITKAKK 56
Query: 132 LDVPKDIVERNIKRASEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKD 191
VP ++E+ + +AS E + YE +G GG S++V+ LTD R+ VR+
Sbjct: 57 DQVPAHVIEKALDKASGGAGEDYQPARYEGFGPGGASVIVDCLTDNGNRTYQDVRQCFVK 116
Query: 192 CGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRA 251
G K+ PG V F V +F D++ +L+ + A AE TD +
Sbjct: 117 TGAKIGTPGVVAHMFDHQAV--FQFQGDDEEAILEALMMADAEV----------TDIEHE 164
Query: 252 ERYYKVVSTSDNYTDITTKLREAGIPFETDNGSEL--LPITTIEVDDEAMELNKELIAKL 309
+ V + + + + T L EA P T + E+ +P V E E ++ + L
Sbjct: 165 DGVITVFAPNTEFFKVKTALNEA-FPDLTLDVEEITFVPQNRTVVSGEDAEKFQKFLDML 223
Query: 310 LELDDVDAVY 319
+ DDV VY
Sbjct: 224 DDCDDVQQVY 233
>SGD|S000003253 [details] [associations]
symbol:YGR021W "Putative protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] SGD:S000003253
GO:GO:0005739 EMBL:BK006941 Gene3D:1.10.10.200 InterPro:IPR017856
eggNOG:COG0217 HOGENOM:HOG000228370 Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
GeneTree:ENSGT00390000012820 EMBL:Z72806 PIR:S64312
RefSeq:NP_011535.1 ProteinModelPortal:P53212 SMR:P53212
DIP:DIP-6261N IntAct:P53212 MINT:MINT-2493375 STRING:P53212
PaxDb:P53212 EnsemblFungi:YGR021W GeneID:852904 KEGG:sce:YGR021W
CYGD:YGR021w OMA:DEHETRI OrthoDB:EOG4WT0M3 NextBio:972589
Genevestigator:P53212 GermOnline:YGR021W Uniprot:P53212
Length = 290
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 75/258 (29%), Positives = 125/258 (48%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGG--PNPTSNTVLAAVLEKAKELDVPKDI 138
S I K DA++ K+ ++ ++ +VK G +P+ N LA +E A + +V K +
Sbjct: 33 STIKHGKAKNDAERNKINNKFANQIAMSVKLGNGITDPSMNIRLATSIELANKNNVSKKV 92
Query: 139 VERNIKRAS---EKGQEAFIEK--VYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCG 193
+E I++AS G+++ + VYE G GGV+IVVE LTD R++ +R
Sbjct: 93 IENAIRKASGSSASGKDSNASELCVYEGMGPGGVAIVVEALTDNKNRTIGLIRSAFNKAN 152
Query: 194 GKMADPGSVMF-KFRRARVVNIKFTDADKDQLLDIALDA-GAEDVIEPPVNED------D 245
G M P F K +V K D + D++L+ L+ G ED+ PV ED D
Sbjct: 153 GSMT-PTLFFFDKKGYVTMVPPKMLDTE-DKVLESVLEIQGIEDIA--PVQEDAEDLECD 208
Query: 246 TDEDRAERYYKVVSTSDNYTDITTKLREAGIPF-ETDNGSELLPITTIEVD-DEAMELNK 303
T+ + + Y+ V + + L+E G + G P + V DE +E +
Sbjct: 209 TETETTGQTYEAVMEPADTNKVAALLKERGFHIRDLGIGYNAKPDMEVFVQGDETLEKLQ 268
Query: 304 ELIAKLLELDDVDAVYTD 321
+L L ++D+V ++YT+
Sbjct: 269 KLTTALEDIDEVTSLYTN 286
>UNIPROTKB|Q2GDC7 [details] [associations]
symbol:NSE_0641 "Probable transcriptional regulatory
protein NSE_0641" species:222891 "Neorickettsia sennetsu str.
Miyayama" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 EMBL:CP000237 GenomeReviews:CP000237_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 Gene3D:3.30.1270.10 Gene3D:3.30.70.980
InterPro:IPR002876 InterPro:IPR026563 InterPro:IPR026564
PANTHER:PTHR12532 Pfam:PF01709 ProtClustDB:PRK00110
TIGRFAMs:TIGR01033 RefSeq:YP_506519.1 ProteinModelPortal:Q2GDC7
STRING:Q2GDC7 GeneID:3932037 KEGG:nse:NSE_0641 PATRIC:22681309
OMA:KGTYLLY BioCyc:NSEN222891:GHFU-655-MONOMER Uniprot:Q2GDC7
Length = 245
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 73/246 (29%), Positives = 126/246 (51%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I RK AQDAK+A+ ++++ +E++ A + G P+P N L + L A+ +PKD +E
Sbjct: 8 ANIKHRKNAQDAKRARKFTKLRREILVAARSGLPDPEFNPRLRSALANARRFGLPKDKIE 67
Query: 141 RNIKRASEKGQEAFIEKVYEVYGYGGV-----SIVVEVLTDKITRSVAAVREVVKDCGGK 195
IK +++K + + E Y GG+ ++VV LTD R+ + V+ ++ G
Sbjct: 68 SAIKSSTDKTEGDYQEVCYMAASSGGMWPSGFAVVVTALTDNKNRTASNVKHILSKSGLV 127
Query: 196 MADPGSVMFKFRRARVVNI-KFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERY 254
+AD V F F V + K TD DK L+++AL+A A D+ T+++ +
Sbjct: 128 LAD---VSFMFESFGVFSYPKSTDFDK--LMEVALEASALDI--------KTEKN----H 170
Query: 255 YKVVSTSDNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDD 314
+ V + +++ + +LR+ +E +G T EV E ++L+ L E DD
Sbjct: 171 FDVYCSRESFAATSLELRKKLGEYE-HSGLVWRAKTHQEVPPEVHVRLEKLVDALEEDDD 229
Query: 315 VDAVYT 320
V VYT
Sbjct: 230 VQRVYT 235
>TIGR_CMR|NSE_0641 [details] [associations]
symbol:NSE_0641 "conserved hypothetical protein TIGR01033"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:CP000237 GenomeReviews:CP000237_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 Gene3D:3.30.1270.10 Gene3D:3.30.70.980
InterPro:IPR002876 InterPro:IPR026563 InterPro:IPR026564
PANTHER:PTHR12532 Pfam:PF01709 ProtClustDB:PRK00110
TIGRFAMs:TIGR01033 RefSeq:YP_506519.1 ProteinModelPortal:Q2GDC7
STRING:Q2GDC7 GeneID:3932037 KEGG:nse:NSE_0641 PATRIC:22681309
OMA:KGTYLLY BioCyc:NSEN222891:GHFU-655-MONOMER Uniprot:Q2GDC7
Length = 245
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 73/246 (29%), Positives = 126/246 (51%)
Query: 81 SKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVE 140
+ I RK AQDAK+A+ ++++ +E++ A + G P+P N L + L A+ +PKD +E
Sbjct: 8 ANIKHRKNAQDAKRARKFTKLRREILVAARSGLPDPEFNPRLRSALANARRFGLPKDKIE 67
Query: 141 RNIKRASEKGQEAFIEKVYEVYGYGGV-----SIVVEVLTDKITRSVAAVREVVKDCGGK 195
IK +++K + + E Y GG+ ++VV LTD R+ + V+ ++ G
Sbjct: 68 SAIKSSTDKTEGDYQEVCYMAASSGGMWPSGFAVVVTALTDNKNRTASNVKHILSKSGLV 127
Query: 196 MADPGSVMFKFRRARVVNI-KFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERY 254
+AD V F F V + K TD DK L+++AL+A A D+ T+++ +
Sbjct: 128 LAD---VSFMFESFGVFSYPKSTDFDK--LMEVALEASALDI--------KTEKN----H 170
Query: 255 YKVVSTSDNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDD 314
+ V + +++ + +LR+ +E +G T EV E ++L+ L E DD
Sbjct: 171 FDVYCSRESFAATSLELRKKLGEYE-HSGLVWRAKTHQEVPPEVHVRLEKLVDALEEDDD 229
Query: 315 VDAVYT 320
V VYT
Sbjct: 230 VQRVYT 235
>CGD|CAL0002610 [details] [associations]
symbol:orf19.805 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00693 CGD:CAL0002610 EMBL:AACQ01000019 EMBL:AACQ01000018
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 RefSeq:XP_720929.1 RefSeq:XP_721049.1
ProteinModelPortal:Q5AHJ1 STRING:Q5AHJ1 GeneID:3637216
GeneID:3637331 KEGG:cal:CaO19.805 KEGG:cal:CaO19.8423
Uniprot:Q5AHJ1
Length = 285
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 76/245 (31%), Positives = 127/245 (51%)
Query: 87 KGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRA 146
K DA+K+K + + + S V+ GG SN L +LEKAK L+V K +VE+ IKR
Sbjct: 38 KAKNDARKSKEATLISGRIESCVRVGGKE--SNARLEQLLEKAKALNVSKAVVEKAIKRG 95
Query: 147 -SEKGQEAFIEKV-YEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMF 204
E A ++ V YE G GGV+I+V LTD R+V+ V+ + ++ P S MF
Sbjct: 96 CGELTDTAQLQNVQYEFMGPGGVAIIVNALTDNKARTVSMVKNAMTYFQATLS-PCSYMF 154
Query: 205 KFRRARVVNI-KFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVS--TS 261
+ V+ + K D D + ++AL+ GAEDV E +D+ + ++Y+++ TS
Sbjct: 155 D-KMGEVIFLPKDNDESFDDVFEVALEIGAEDVEEFEF-DDEFVPGKVHKFYRLLCDPTS 212
Query: 262 DNYT--DITTK---LREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDDVD 316
N D++ K L E+ + F ++ S++ P +E+ + + L +++DV
Sbjct: 213 INQVSNDLSAKGYKLHESTVRFLANSDSQV-PFP-----EESSKGYLRALDNLDQINDVT 266
Query: 317 AVYTD 321
YT+
Sbjct: 267 DYYTN 271
>UNIPROTKB|Q5AHJ1 [details] [associations]
symbol:CaO19.805 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00693 CGD:CAL0002610 EMBL:AACQ01000019
EMBL:AACQ01000018 Gene3D:1.10.10.200 InterPro:IPR017856
eggNOG:COG0217 Gene3D:3.30.1270.10 Gene3D:3.30.70.980
InterPro:IPR002876 InterPro:IPR026563 InterPro:IPR026564
PANTHER:PTHR12532 Pfam:PF01709 RefSeq:XP_720929.1
RefSeq:XP_721049.1 ProteinModelPortal:Q5AHJ1 STRING:Q5AHJ1
GeneID:3637216 GeneID:3637331 KEGG:cal:CaO19.805
KEGG:cal:CaO19.8423 Uniprot:Q5AHJ1
Length = 285
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 76/245 (31%), Positives = 127/245 (51%)
Query: 87 KGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRA 146
K DA+K+K + + + S V+ GG SN L +LEKAK L+V K +VE+ IKR
Sbjct: 38 KAKNDARKSKEATLISGRIESCVRVGGKE--SNARLEQLLEKAKALNVSKAVVEKAIKRG 95
Query: 147 -SEKGQEAFIEKV-YEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADPGSVMF 204
E A ++ V YE G GGV+I+V LTD R+V+ V+ + ++ P S MF
Sbjct: 96 CGELTDTAQLQNVQYEFMGPGGVAIIVNALTDNKARTVSMVKNAMTYFQATLS-PCSYMF 154
Query: 205 KFRRARVVNI-KFTDADKDQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVS--TS 261
+ V+ + K D D + ++AL+ GAEDV E +D+ + ++Y+++ TS
Sbjct: 155 D-KMGEVIFLPKDNDESFDDVFEVALEIGAEDVEEFEF-DDEFVPGKVHKFYRLLCDPTS 212
Query: 262 DNYT--DITTK---LREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDDVD 316
N D++ K L E+ + F ++ S++ P +E+ + + L +++DV
Sbjct: 213 INQVSNDLSAKGYKLHESTVRFLANSDSQV-PFP-----EESSKGYLRALDNLDQINDVT 266
Query: 317 AVYTD 321
YT+
Sbjct: 267 DYYTN 271
>UNIPROTKB|Q4K9M3 [details] [associations]
symbol:PFL_3960 "Probable transcriptional regulatory
protein PFL_3960" species:220664 "Pseudomonas protegens Pf-5"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00693 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 EMBL:CP000076 GenomeReviews:CP000076_GR
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 Gene3D:3.30.1270.10 Gene3D:3.30.70.980
InterPro:IPR002876 InterPro:IPR026563 InterPro:IPR026564
PANTHER:PTHR12532 Pfam:PF01709 ProtClustDB:PRK12378 OMA:GSVSWDF
RefSeq:YP_261060.1 HSSP:O67517 ProteinModelPortal:Q4K9M3
STRING:Q4K9M3 GeneID:3477718 KEGG:pfl:PFL_3960 PATRIC:19877311
BioCyc:PFLU220664:GIX8-3994-MONOMER Uniprot:Q4K9M3
Length = 234
Score = 189 (71.6 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 51/160 (31%), Positives = 87/160 (54%)
Query: 82 KIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVER 141
K+ ++ A +AK K++ ++ KE+ A + G T N L V+E+AK+ +P++ +ER
Sbjct: 6 KVKHKEAAANAK-GKIFGKLVKEITIAARNGADTAT-NAHLRLVVEQAKKASMPRETLER 63
Query: 142 NIKRAS-EKGQEAFIEKV-YEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
IK+ S + G+ +V YE + V ++VE +TD I R+VA +R + G++
Sbjct: 64 AIKKGSGQLGETVQYHRVTYEGFAPHQVPLIVECVTDNINRTVAEIRVAFRK--GQLGAS 121
Query: 200 GSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEP 239
GSV + F ++ D D L A++AGA+D EP
Sbjct: 122 GSVSWDFNHVGMIEASPDSPDADPEL-AAIEAGAQD-FEP 159
>UNIPROTKB|Q880J5 [details] [associations]
symbol:PSPTO_3162 "Probable transcriptional regulatory
protein PSPTO_3162" species:223283 "Pseudomonas syringae pv. tomato
str. DC3000" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00693 GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 EMBL:AE016853
GenomeReviews:AE016853_GR Gene3D:1.10.10.200 InterPro:IPR017856
eggNOG:COG0217 HOGENOM:HOG000228370 Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK12378 OMA:GSVSWDF RefSeq:NP_792952.1
ProteinModelPortal:Q880J5 GeneID:1184819 KEGG:pst:PSPTO_3162
PATRIC:19997699 BioCyc:PSYR223283:GJIX-3214-MONOMER Uniprot:Q880J5
Length = 234
Score = 188 (71.2 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 52/162 (32%), Positives = 93/162 (57%)
Query: 82 KIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVER 141
K+ ++ A +AK + + ++ KE++ A + G +P N+ L V+E+AK+ +P++ +ER
Sbjct: 6 KVKHKEAAANAK-GRTFGKLSKEIMIAARAGA-DPDMNSRLRLVVEQAKKASMPRETLER 63
Query: 142 NIKR-ASEKGQEAFIEKV-YEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
IK+ A G+ E++ YE + V ++VE LTD I R+V+ +R + + G++
Sbjct: 64 AIKKGAGLLGESVNFERLTYEGFAPHRVPVIVECLTDNINRTVSEIRVLFRK--GQLGAA 121
Query: 200 GSVMFKFRRARVVNIKFT--DADKDQLLDIALDAGAEDVIEP 239
GSV + F ++ T DAD D+ A++AGA+D EP
Sbjct: 122 GSVSWDFLYQGMIEAVPTAPDADADEA---AIEAGAQDC-EP 159
>UNIPROTKB|Q48JK4 [details] [associations]
symbol:PSPPH_2212 "Probable transcriptional regulatory
protein PSPPH_2212" species:264730 "Pseudomonas syringae pv.
phaseolicola 1448A" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00693 GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 EMBL:CP000058
GenomeReviews:CP000058_GR Gene3D:1.10.10.200 InterPro:IPR017856
eggNOG:COG0217 HOGENOM:HOG000228370 Gene3D:3.30.1270.10
Gene3D:3.30.70.980 InterPro:IPR002876 InterPro:IPR026563
InterPro:IPR026564 PANTHER:PTHR12532 Pfam:PF01709
ProtClustDB:PRK12378 RefSeq:YP_274424.1 ProteinModelPortal:Q48JK4
STRING:Q48JK4 GeneID:3559386 KEGG:psp:PSPPH_2212 PATRIC:19973664
OMA:GSVSWDF Uniprot:Q48JK4
Length = 234
Score = 186 (70.5 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 49/156 (31%), Positives = 89/156 (57%)
Query: 82 KIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVER 141
K+ ++ A +AK + + ++ KE++ A + G +P N+ L V+E+AK+ +P++ +ER
Sbjct: 6 KVKHKEAAANAK-GRTFGKLSKEIMIAARAGA-DPDMNSRLRLVVEQAKKASMPRETLER 63
Query: 142 NIKR-ASEKGQEAFIEKV-YEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGGKMADP 199
IK+ A G+ E++ YE + V ++VE LTD I R+V+ +R + + G++
Sbjct: 64 AIKKGAGLLGESVNFERLTYEGFAPHRVPVIVECLTDNINRTVSEIRVLFRK--GQLGAA 121
Query: 200 GSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAED 235
GSV + F ++ AD D L A++AGA+D
Sbjct: 122 GSVSWDFLYQGMIEAVPAAADADPEL-AAIEAGAQD 156
>ASPGD|ASPL0000002583 [details] [associations]
symbol:AN6599 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] HAMAP:MF_00693 EMBL:BN001301 EMBL:AACD01000110
Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
HOGENOM:HOG000228370 Gene3D:3.30.1270.10 Gene3D:3.30.70.980
InterPro:IPR002876 InterPro:IPR026563 InterPro:IPR026564
PANTHER:PTHR12532 Pfam:PF01709 OrthoDB:EOG4WT0M3 RefSeq:XP_664203.1
ProteinModelPortal:Q5AYN1 STRING:Q5AYN1
EnsemblFungi:CADANIAT00007378 GeneID:2870515 KEGG:ani:AN6599.2
OMA:FEKKGRI Uniprot:Q5AYN1
Length = 277
Score = 192 (72.6 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 75/262 (28%), Positives = 122/262 (46%)
Query: 66 RTIRTFAPVCMGR-RSSKIAGRKGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAA 124
R+ + +C G R S+I K D K++ + KE+ SAV+ GP+ N L
Sbjct: 25 RSFSSSPSLCAGHNRWSQIKHGKAKNDKAKSRERQMVAKEISSAVQMWGPDLKFNPRLTL 84
Query: 125 VLEKAKELDVPKDIVERNIKRA---SEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRS 181
L AK +PK I+E I R S G EA E V+ V+E LT+ R
Sbjct: 85 ALSNAKRAGIPKTIIEAAIARGQGLSITG-EALEPVTIEAILPHSVAAVIECLTESKARL 143
Query: 182 VAAVREVVKDCGGKMADPGSVMFKFRRARVVNIKFTDADKDQLLDIALDAGAEDVIEPPV 241
+ VR +K+ GG A P + +F+ ++ R+V K D L+ A++AGA D+
Sbjct: 144 LQDVRHAIKEAGGT-ATPTAYLFE-KKGRIVFEKKDGVSADDCLEQAIEAGATDI----- 196
Query: 242 NEDDTDEDRAERYYKVVSTSDNYTDITTKLREAGIPFETDNGSELL--PI--TTIEVDDE 297
+DE+ + + + N + +KL AG+ E E++ P T +E+ DE
Sbjct: 197 ---SSDEEGRIIVFTEPTATKNVGETLSKL--AGLTVEE---LEIIWAPNQDTLVELKDE 248
Query: 298 AMELNKELIAKLLELDDVDAVY 319
++ +E++A L + V +Y
Sbjct: 249 QVQEIEEILAFLRDEAGVRDIY 270
>WB|WBGene00021757 [details] [associations]
symbol:Y50D7A.9 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] GO:GO:0019915
EMBL:FO081772 Gene3D:1.10.10.200 InterPro:IPR017856 eggNOG:COG0217
Gene3D:3.30.1270.10 Gene3D:3.30.70.980 InterPro:IPR002876
InterPro:IPR026563 InterPro:IPR026564 PANTHER:PTHR12532
Pfam:PF01709 GeneTree:ENSGT00390000012820 RefSeq:NP_497183.1
ProteinModelPortal:Q965T4 SMR:Q965T4 STRING:Q965T4 PaxDb:Q965T4
EnsemblMetazoa:Y50D7A.9.1 EnsemblMetazoa:Y50D7A.9.2 GeneID:175191
KEGG:cel:CELE_Y50D7A.9 UCSC:Y50D7A.9 CTD:175191 WormBase:Y50D7A.9
HOGENOM:HOG000020672 InParanoid:Q965T4 OMA:KKFELIC NextBio:887134
Uniprot:Q965T4
Length = 285
Score = 114 (45.2 bits), Expect = 0.00037, P = 0.00037
Identities = 48/233 (20%), Positives = 106/233 (45%)
Query: 87 KGAQDAKKAKLYSRMGKEVISAVKKGGPNPTSNTVLAAVLEKAKELDVPKDIVERNIKRA 146
KG D ++K + + ++V AV +GG + N LA + + + +P D ++ +++
Sbjct: 53 KGKNDLIRSKATNFLLRKVRGAVSRGGFDMKLNRELADLESEFRAQGLPLDTLKNFLQKM 112
Query: 147 SEKGQEAFIEKVYEVYGYGGVSIVVEVLTDKITRSVAAVREVVKDCGG-KMADPGSVMFK 205
+K + +E +++ G G+ ++V T +R+ GG ++A G V
Sbjct: 113 KDKPE---VEYSFDIIGPSGIFLIVTAETSNKKAFENDLRKYFNKLGGFRLAADGGVRSW 169
Query: 206 FRRARVVNIKFTDADK----DQLLDIALDAGAEDVIEPPVNEDDTDEDRAERYYKVVSTS 261
F VV++ K +++ +I L+ AE+V+ + ED T + ++++ +
Sbjct: 170 FEEKGVVHVDTKKGGKILNIEEMEEIGLEFDAEEVLL--IEEDSTKK------FELICDA 221
Query: 262 DNYTDITTKLREAGIPFETDNGSELLPITTIEVDDEAMELNKELIAKLLELDD 314
+ + L + G + E P+ I+ EA E + + ++L+ D+
Sbjct: 222 KSLQTLENGLGKGGFSI-LQSEIEFRPVHPIDCP-EAEEPKVQKLYEMLQEDE 272
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.132 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 323 308 0.00078 116 3 11 23 0.44 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 53
No. of states in DFA: 590 (63 KB)
Total size of DFA: 185 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.23u 0.09s 27.32t Elapsed: 00:00:01
Total cpu time: 27.24u 0.09s 27.33t Elapsed: 00:00:01
Start: Fri May 10 03:33:07 2013 End: Fri May 10 03:33:08 2013