Query 020675
Match_columns 323
No_of_seqs 396 out of 1746
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 04:16:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020675.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020675hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0637 Predicted phosphatase/ 100.0 2.3E-28 4.9E-33 219.4 17.6 176 83-322 1-187 (221)
2 PLN02770 haloacid dehalogenase 100.0 9.3E-28 2E-32 218.9 17.5 180 79-323 17-210 (248)
3 PRK13288 pyrophosphatase PpaX; 100.0 1.7E-27 3.6E-32 212.0 17.2 179 82-323 1-184 (214)
4 TIGR01422 phosphonatase phosph 100.0 3.3E-27 7.1E-32 215.5 18.9 176 84-323 2-203 (253)
5 PLN03243 haloacid dehalogenase 100.0 3.4E-27 7.4E-32 216.6 17.1 179 81-321 21-209 (260)
6 PRK13226 phosphoglycolate phos 100.0 3.5E-27 7.5E-32 212.6 16.8 176 84-323 12-197 (229)
7 PRK11587 putative phosphatase; 99.9 4.8E-27 1E-31 209.9 16.1 172 82-323 1-184 (218)
8 COG0546 Gph Predicted phosphat 99.9 1.7E-26 3.7E-31 206.9 18.3 179 82-323 2-191 (220)
9 TIGR03351 PhnX-like phosphonat 99.9 2.4E-26 5.1E-31 205.2 18.6 176 84-323 1-193 (220)
10 PRK13478 phosphonoacetaldehyde 99.9 3E-26 6.4E-31 211.1 19.3 178 82-323 2-205 (267)
11 PRK10826 2-deoxyglucose-6-phos 99.9 2.6E-26 5.7E-31 205.6 16.1 178 81-322 4-193 (222)
12 TIGR01449 PGP_bact 2-phosphogl 99.9 3.6E-26 7.8E-31 202.6 16.3 173 87-323 1-187 (213)
13 PLN02575 haloacid dehalogenase 99.9 4.2E-26 9.2E-31 217.7 17.3 178 83-323 130-318 (381)
14 TIGR02009 PGMB-YQAB-SF beta-ph 99.9 9.7E-26 2.1E-30 195.4 16.8 171 84-320 1-185 (185)
15 TIGR01990 bPGM beta-phosphoglu 99.9 6.3E-26 1.4E-30 196.6 14.1 170 86-321 1-185 (185)
16 TIGR01454 AHBA_synth_RP 3-amin 99.9 6E-26 1.3E-30 200.7 14.2 174 87-323 1-177 (205)
17 PLN02779 haloacid dehalogenase 99.9 3.3E-25 7.2E-30 206.2 19.0 183 81-323 37-248 (286)
18 PRK10563 6-phosphogluconate ph 99.9 1.1E-25 2.3E-30 201.3 14.9 176 82-322 2-187 (221)
19 PRK10725 fructose-1-P/6-phosph 99.9 1.4E-25 3.1E-30 195.2 14.9 169 83-321 4-186 (188)
20 PRK13225 phosphoglycolate phos 99.9 4.2E-25 9.2E-30 204.0 17.7 176 80-323 58-241 (273)
21 TIGR02253 CTE7 HAD superfamily 99.9 5.2E-25 1.1E-29 196.4 17.6 175 84-323 2-197 (221)
22 PLN02940 riboflavin kinase 99.9 2.2E-25 4.8E-30 215.1 15.0 176 82-323 9-196 (382)
23 PRK13223 phosphoglycolate phos 99.9 1.1E-24 2.5E-29 201.3 17.2 177 84-323 13-203 (272)
24 TIGR02252 DREG-2 REG-2-like, H 99.9 1.3E-24 2.9E-29 191.6 16.4 170 85-319 1-203 (203)
25 PRK09449 dUMP phosphatase; Pro 99.9 2.7E-24 5.8E-29 192.4 17.8 173 82-322 1-197 (224)
26 PRK14988 GMP/IMP nucleotidase; 99.9 9.8E-25 2.1E-29 196.1 15.0 176 82-322 8-195 (224)
27 PRK13222 phosphoglycolate phos 99.9 2.7E-24 5.9E-29 192.1 17.3 177 81-323 3-195 (226)
28 TIGR01428 HAD_type_II 2-haloal 99.9 8.4E-25 1.8E-29 192.2 12.6 104 159-322 90-193 (198)
29 TIGR02254 YjjG/YfnB HAD superf 99.9 5.2E-24 1.1E-28 189.9 16.6 174 84-323 1-200 (224)
30 PF13419 HAD_2: Haloacid dehal 99.9 1.1E-24 2.5E-29 185.0 10.5 167 87-320 1-176 (176)
31 PRK06698 bifunctional 5'-methy 99.9 1.4E-23 3.1E-28 207.4 15.6 175 82-323 239-429 (459)
32 TIGR01993 Pyr-5-nucltdase pyri 99.9 2.4E-23 5.3E-28 181.0 13.0 173 86-320 2-184 (184)
33 PLN02919 haloacid dehalogenase 99.9 6.9E-23 1.5E-27 219.1 19.3 179 81-323 72-264 (1057)
34 TIGR02247 HAD-1A3-hyp Epoxide 99.9 2.3E-23 5E-28 184.9 13.1 175 84-322 2-197 (211)
35 TIGR01548 HAD-SF-IA-hyp1 haloa 99.9 1.3E-22 2.9E-27 178.4 16.4 164 86-313 2-197 (197)
36 PRK10748 flavin mononucleotide 99.9 2.7E-22 5.8E-27 181.8 14.5 173 83-322 9-209 (238)
37 KOG3085 Predicted hydrolase (H 99.9 1.2E-22 2.6E-27 181.5 11.6 181 80-322 3-214 (237)
38 TIGR01509 HAD-SF-IA-v3 haloaci 99.9 1.6E-22 3.6E-27 174.4 11.8 100 160-320 84-183 (183)
39 PRK09456 ?-D-glucose-1-phospha 99.9 5.9E-22 1.3E-26 174.6 13.7 104 160-323 83-187 (199)
40 PLN02811 hydrolase 99.9 1.1E-21 2.4E-26 175.6 14.1 168 91-323 1-186 (220)
41 TIGR01549 HAD-SF-IA-v1 haloaci 99.9 1.1E-21 2.3E-26 165.5 12.9 154 86-314 1-154 (154)
42 COG1011 Predicted hydrolase (H 99.9 1.5E-21 3.2E-26 174.6 14.5 103 159-322 97-200 (229)
43 PHA02597 30.2 hypothetical pro 99.9 5E-21 1.1E-25 168.2 14.7 165 84-323 2-176 (197)
44 KOG2914 Predicted haloacid-hal 99.9 1.2E-20 2.6E-25 167.9 16.6 176 82-322 8-197 (222)
45 TIGR00338 serB phosphoserine p 99.8 2.1E-20 4.5E-25 166.7 15.1 178 81-319 11-193 (219)
46 TIGR01493 HAD-SF-IA-v2 Haloaci 99.8 1E-20 2.2E-25 162.8 6.8 157 86-313 1-175 (175)
47 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.8 3.6E-19 7.8E-24 156.0 16.6 178 84-321 4-190 (201)
48 PLN02954 phosphoserine phospha 99.8 3.8E-19 8.3E-24 159.1 15.5 180 82-320 10-195 (224)
49 TIGR01656 Histidinol-ppas hist 99.8 1.8E-19 4E-24 151.5 10.1 107 161-323 27-147 (147)
50 PRK11133 serB phosphoserine ph 99.8 4.5E-18 9.9E-23 160.4 15.5 178 81-319 107-289 (322)
51 TIGR01691 enolase-ppase 2,3-di 99.8 4.9E-18 1.1E-22 152.0 14.4 102 159-322 93-197 (220)
52 TIGR00213 GmhB_yaeD D,D-heptos 99.8 2.2E-18 4.7E-23 149.2 11.1 116 160-323 25-153 (176)
53 TIGR01261 hisB_Nterm histidino 99.8 1.7E-18 3.6E-23 147.9 10.1 106 160-323 28-149 (161)
54 TIGR01662 HAD-SF-IIIA HAD-supe 99.8 4.5E-18 9.8E-23 140.0 11.8 97 161-321 25-131 (132)
55 KOG3109 Haloacid dehalogenase- 99.8 1.3E-17 2.8E-22 144.9 14.6 184 81-322 12-206 (244)
56 PRK08942 D,D-heptose 1,7-bisph 99.8 3.4E-18 7.5E-23 148.5 11.1 110 160-323 28-149 (181)
57 TIGR01685 MDP-1 magnesium-depe 99.8 3.6E-19 7.7E-24 153.5 4.6 106 159-323 43-159 (174)
58 PRK09552 mtnX 2-hydroxy-3-keto 99.8 1.9E-17 4.2E-22 148.1 15.9 172 83-318 2-184 (219)
59 TIGR01672 AphA HAD superfamily 99.8 1.7E-17 3.6E-22 149.9 14.8 148 86-323 65-213 (237)
60 TIGR01664 DNA-3'-Pase DNA 3'-p 99.7 3.6E-17 7.9E-22 140.4 10.4 99 162-319 43-160 (166)
61 PRK13582 thrH phosphoserine ph 99.7 4.5E-17 9.8E-22 143.6 10.7 164 84-318 1-168 (205)
62 PRK06769 hypothetical protein; 99.7 7.4E-17 1.6E-21 139.4 8.7 108 160-323 27-139 (173)
63 TIGR01489 DKMTPPase-SF 2,3-dik 99.7 1.1E-15 2.3E-20 132.5 14.2 175 86-317 3-185 (188)
64 cd01427 HAD_like Haloacid deha 99.7 6.8E-16 1.5E-20 125.1 10.9 118 159-320 22-139 (139)
65 TIGR03333 salvage_mtnX 2-hydro 99.6 3.3E-15 7.1E-20 133.2 14.3 116 150-316 60-178 (214)
66 COG0560 SerB Phosphoserine pho 99.6 1.9E-14 4.1E-19 128.2 16.3 175 82-319 3-185 (212)
67 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.6 1.7E-14 3.6E-19 126.9 14.3 113 160-321 86-198 (202)
68 TIGR01488 HAD-SF-IB Haloacid D 99.6 9.3E-15 2E-19 125.5 12.3 107 159-313 71-177 (177)
69 PHA02530 pseT polynucleotide k 99.6 5.7E-15 1.2E-19 138.0 11.1 111 160-323 186-298 (300)
70 PRK11009 aphA acid phosphatase 99.6 1.1E-14 2.4E-19 131.5 12.2 99 159-323 112-213 (237)
71 TIGR01681 HAD-SF-IIIC HAD-supe 99.6 3.7E-15 8E-20 122.5 8.3 89 161-312 29-126 (128)
72 PRK05446 imidazole glycerol-ph 99.6 8.9E-15 1.9E-19 139.2 11.8 104 160-321 29-148 (354)
73 TIGR02137 HSK-PSP phosphoserin 99.6 3.2E-14 7E-19 126.0 14.6 163 85-321 2-171 (203)
74 TIGR01670 YrbI-phosphatas 3-de 99.6 5.1E-15 1.1E-19 125.5 7.5 83 169-321 36-118 (154)
75 PF00702 Hydrolase: haloacid d 99.6 3.9E-15 8.6E-20 131.2 7.1 88 160-314 126-215 (215)
76 TIGR01668 YqeG_hyp_ppase HAD s 99.6 1.5E-14 3.1E-19 124.7 9.9 96 159-323 41-138 (170)
77 TIGR01452 PGP_euk phosphoglyco 99.6 4.9E-15 1.1E-19 137.4 7.0 48 262-323 201-249 (279)
78 TIGR02726 phenyl_P_delta pheny 99.6 1.2E-14 2.6E-19 125.0 8.5 82 170-320 43-124 (169)
79 COG2179 Predicted hydrolase of 99.5 2.4E-14 5.3E-19 119.9 9.8 89 164-321 49-138 (175)
80 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.5 2.1E-14 4.6E-19 131.7 6.7 105 162-323 121-226 (257)
81 PLN02645 phosphoglycolate phos 99.5 7.3E-13 1.6E-17 124.8 15.7 41 283-323 236-277 (311)
82 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.5 5.7E-13 1.2E-17 121.7 14.1 49 261-323 176-225 (249)
83 COG0647 NagD Predicted sugar p 99.5 5.2E-13 1.1E-17 122.4 13.4 49 261-323 188-237 (269)
84 PRK11590 hypothetical protein; 99.5 2.1E-12 4.5E-17 115.0 16.9 178 83-319 5-201 (211)
85 PRK10444 UMP phosphatase; Prov 99.4 1E-11 2.3E-16 113.3 14.6 49 261-323 172-221 (248)
86 PRK08238 hypothetical protein; 99.4 1.5E-11 3.3E-16 121.8 15.9 157 84-322 10-166 (479)
87 TIGR01663 PNK-3'Pase polynucle 99.3 3.3E-12 7.1E-17 127.3 9.6 96 162-316 198-306 (526)
88 TIGR01686 FkbH FkbH-like domai 99.3 6.5E-12 1.4E-16 118.8 10.8 90 162-316 32-125 (320)
89 smart00577 CPDc catalytic doma 99.3 1.3E-12 2.8E-17 110.0 5.0 94 160-317 44-138 (148)
90 KOG1615 Phosphoserine phosphat 99.3 2.5E-11 5.4E-16 104.1 12.0 114 83-211 15-137 (227)
91 TIGR01460 HAD-SF-IIA Haloacid 99.3 5E-11 1.1E-15 108.0 14.5 41 283-323 194-236 (236)
92 PTZ00445 p36-lilke protein; Pr 99.3 1.6E-11 3.5E-16 107.5 10.4 51 260-322 154-206 (219)
93 TIGR01544 HAD-SF-IE haloacid d 99.3 9.3E-11 2E-15 107.9 13.3 121 148-313 108-230 (277)
94 PF12689 Acid_PPase: Acid Phos 99.2 2.3E-11 5E-16 104.3 8.4 101 159-323 43-153 (169)
95 PF06888 Put_Phosphatase: Puta 99.2 5.1E-10 1.1E-14 100.9 14.2 179 86-316 2-191 (234)
96 PF13242 Hydrolase_like: HAD-h 99.2 2.2E-11 4.7E-16 90.6 3.9 49 261-323 2-51 (75)
97 PRK10530 pyridoxal phosphate ( 99.2 1.7E-10 3.7E-15 105.9 10.6 37 283-319 204-240 (272)
98 COG0241 HisB Histidinol phosph 99.1 5.3E-10 1.1E-14 96.5 10.1 110 160-323 30-151 (181)
99 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.1 5.2E-11 1.1E-15 108.2 4.0 100 163-322 140-242 (242)
100 TIGR01533 lipo_e_P4 5'-nucleot 99.1 9.6E-10 2.1E-14 101.0 11.8 51 157-207 114-164 (266)
101 PRK09484 3-deoxy-D-manno-octul 99.1 3.3E-10 7.2E-15 98.7 7.6 81 169-318 56-136 (183)
102 TIGR01545 YfhB_g-proteo haloac 99.1 4.2E-09 9.2E-14 93.8 14.7 106 160-319 93-200 (210)
103 KOG3040 Predicted sugar phosph 99.0 9.6E-10 2.1E-14 95.4 8.4 49 261-323 179-228 (262)
104 PF08645 PNK3P: Polynucleotide 99.0 6.7E-10 1.4E-14 94.7 7.2 98 162-318 30-153 (159)
105 PF09419 PGP_phosphatase: Mito 99.0 6.4E-09 1.4E-13 89.0 11.4 41 283-323 120-166 (168)
106 TIGR01456 CECR5 HAD-superfamil 99.0 1.1E-08 2.3E-13 96.9 13.8 49 261-323 231-293 (321)
107 TIGR02244 HAD-IG-Ncltidse HAD 98.9 6E-09 1.3E-13 98.8 10.6 124 160-321 183-323 (343)
108 COG4229 Predicted enolase-phos 98.9 1.1E-08 2.4E-13 87.1 10.6 100 160-321 102-204 (229)
109 PF12710 HAD: haloacid dehalog 98.9 1.8E-08 3.9E-13 87.3 12.0 40 164-206 92-131 (192)
110 PRK01158 phosphoglycolate phos 98.8 7.8E-09 1.7E-13 92.6 7.8 37 283-319 162-198 (230)
111 TIGR01482 SPP-subfamily Sucros 98.8 4.2E-08 9.2E-13 87.4 11.7 37 283-319 154-190 (225)
112 KOG2882 p-Nitrophenyl phosphat 98.8 6.5E-08 1.4E-12 88.8 11.3 49 261-323 222-271 (306)
113 KOG3120 Predicted haloacid deh 98.8 3.4E-07 7.3E-12 80.5 15.2 111 83-210 12-131 (256)
114 PRK00192 mannosyl-3-phosphogly 98.8 3.4E-08 7.3E-13 91.3 9.5 37 283-319 195-232 (273)
115 COG1778 Low specificity phosph 98.8 7.8E-09 1.7E-13 86.1 4.3 80 170-318 44-123 (170)
116 COG4359 Uncharacterized conser 98.8 2.3E-07 5E-12 79.3 13.2 119 86-217 5-127 (220)
117 TIGR01684 viral_ppase viral ph 98.7 2.8E-08 6.1E-13 91.6 8.2 52 164-219 149-200 (301)
118 TIGR01487 SPP-like sucrose-pho 98.7 1.1E-07 2.5E-12 84.4 9.4 37 283-319 152-188 (215)
119 TIGR02463 MPGP_rel mannosyl-3- 98.6 2.9E-07 6.3E-12 82.1 11.4 37 283-319 184-220 (221)
120 TIGR01525 ATPase-IB_hvy heavy 98.6 5.9E-08 1.3E-12 98.5 7.7 88 160-318 383-471 (556)
121 TIGR01512 ATPase-IB2_Cd heavy 98.6 6.8E-08 1.5E-12 97.6 8.0 87 160-317 361-448 (536)
122 PRK15126 thiamin pyrimidine py 98.6 1.1E-07 2.3E-12 87.7 8.2 38 282-319 192-229 (272)
123 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.6 2.2E-07 4.8E-12 84.3 9.0 93 160-315 23-116 (242)
124 COG0561 Cof Predicted hydrolas 98.6 2.2E-07 4.8E-12 85.1 8.2 37 283-319 194-230 (264)
125 PRK10513 sugar phosphate phosp 98.5 1.6E-07 3.5E-12 86.2 7.2 38 282-319 200-237 (270)
126 TIGR01511 ATPase-IB1_Cu copper 98.5 2.4E-07 5.1E-12 94.2 7.3 42 160-204 404-445 (562)
127 PRK10976 putative hydrolase; P 98.5 7.3E-07 1.6E-11 81.8 9.7 38 282-319 194-231 (266)
128 TIGR02251 HIF-SF_euk Dullard-l 98.5 8.8E-08 1.9E-12 81.9 2.6 97 160-320 41-138 (162)
129 COG4996 Predicted phosphatase 98.4 7.5E-07 1.6E-11 72.1 6.4 50 159-211 39-88 (164)
130 PHA03398 viral phosphatase sup 98.4 9.3E-07 2E-11 81.8 7.8 49 164-216 151-199 (303)
131 PF03767 Acid_phosphat_B: HAD 98.4 8.1E-07 1.8E-11 80.2 7.3 54 153-206 107-160 (229)
132 PLN02887 hydrolase family prot 98.4 2.9E-07 6.2E-12 93.4 4.5 38 282-319 511-548 (580)
133 PF06941 NT5C: 5' nucleotidase 98.4 1.7E-07 3.7E-12 82.1 2.4 29 159-187 71-99 (191)
134 TIGR01675 plant-AP plant acid 98.3 2.9E-06 6.2E-11 76.3 9.5 53 154-206 113-165 (229)
135 TIGR00099 Cof-subfamily Cof su 98.3 7.4E-07 1.6E-11 81.3 5.8 38 282-319 192-229 (256)
136 TIGR02461 osmo_MPG_phos mannos 98.3 1E-05 2.2E-10 72.8 12.9 36 283-318 186-223 (225)
137 PRK10671 copA copper exporting 98.3 1.3E-06 2.8E-11 92.8 8.2 88 161-319 650-737 (834)
138 PRK03669 mannosyl-3-phosphogly 98.3 1.2E-06 2.5E-11 81.0 6.5 38 282-319 191-231 (271)
139 smart00775 LNS2 LNS2 domain. T 98.3 6.3E-06 1.4E-10 70.1 9.7 39 162-200 28-66 (157)
140 PF11019 DUF2608: Protein of u 98.2 2.6E-05 5.6E-10 71.4 13.8 113 161-321 81-209 (252)
141 TIGR01680 Veg_Stor_Prot vegeta 98.2 5.2E-06 1.1E-10 76.0 7.2 51 155-205 139-189 (275)
142 TIGR01522 ATPase-IIA2_Ca golgi 98.1 7.6E-06 1.6E-10 87.5 8.5 114 161-319 528-642 (884)
143 COG3700 AphA Acid phosphatase 98.1 4.3E-05 9.4E-10 65.2 11.0 96 162-321 115-211 (237)
144 PRK11033 zntA zinc/cadmium/mer 98.0 1.8E-05 4E-10 83.0 8.7 43 161-206 568-610 (741)
145 PRK14502 bifunctional mannosyl 98.0 1.9E-05 4.1E-10 80.7 7.7 38 282-319 617-656 (694)
146 PF05116 S6PP: Sucrose-6F-phos 97.8 0.00013 2.7E-09 66.7 10.3 39 283-322 170-208 (247)
147 PRK10187 trehalose-6-phosphate 97.8 0.00045 9.7E-09 63.8 13.7 32 282-313 178-209 (266)
148 PLN02177 glycerol-3-phosphate 97.7 0.00079 1.7E-08 67.4 14.3 99 162-318 111-212 (497)
149 TIGR01497 kdpB K+-transporting 97.7 7.5E-05 1.6E-09 77.1 7.0 45 161-208 446-490 (675)
150 PRK14010 potassium-transportin 97.7 0.00026 5.5E-09 73.3 10.3 45 161-208 441-485 (673)
151 COG2217 ZntA Cation transport 97.6 0.00012 2.6E-09 75.9 7.3 47 160-209 536-582 (713)
152 PRK01122 potassium-transportin 97.6 0.00035 7.5E-09 72.4 10.1 45 161-208 445-489 (679)
153 TIGR02250 FCP1_euk FCP1-like p 97.5 0.00015 3.2E-09 61.6 5.6 54 159-216 56-110 (156)
154 TIGR01116 ATPase-IIA1_Ca sarco 97.5 0.00034 7.4E-09 75.2 9.5 43 160-205 536-578 (917)
155 KOG2630 Enolase-phosphatase E- 97.5 0.0024 5.1E-08 56.9 12.9 95 161-321 123-224 (254)
156 PF13344 Hydrolase_6: Haloacid 97.5 0.00082 1.8E-08 52.7 8.9 50 161-210 14-63 (101)
157 PF05761 5_nucleotid: 5' nucle 97.5 0.0003 6.5E-09 69.4 7.7 130 160-321 182-324 (448)
158 PF08235 LNS2: LNS2 (Lipin/Ned 97.5 0.0023 5E-08 54.2 11.7 40 162-201 28-67 (157)
159 PF03031 NIF: NLI interacting 97.4 0.00011 2.4E-09 62.1 3.6 49 159-211 34-83 (159)
160 COG4087 Soluble P-type ATPase 97.4 0.0012 2.7E-08 53.7 8.8 92 160-321 29-120 (152)
161 COG2503 Predicted secreted aci 97.4 0.0007 1.5E-08 60.7 8.1 52 157-208 118-170 (274)
162 COG0474 MgtA Cation transport 97.4 0.00083 1.8E-08 72.2 9.6 118 160-321 546-665 (917)
163 TIGR01524 ATPase-IIIB_Mg magne 97.3 0.0012 2.5E-08 70.7 9.8 112 161-319 515-627 (867)
164 TIGR01647 ATPase-IIIA_H plasma 97.3 0.0016 3.4E-08 68.7 10.2 42 161-205 442-483 (755)
165 PRK15122 magnesium-transportin 97.2 0.0016 3.5E-08 70.0 10.2 112 161-319 550-662 (903)
166 PRK10517 magnesium-transportin 97.2 0.0016 3.5E-08 69.9 9.8 113 160-319 549-662 (902)
167 PRK12702 mannosyl-3-phosphogly 97.2 0.0013 2.8E-08 61.2 7.4 26 294-319 226-251 (302)
168 TIGR01523 ATPase-IID_K-Na pota 97.1 0.0022 4.8E-08 69.9 9.3 41 161-204 646-686 (1053)
169 COG5663 Uncharacterized conser 97.0 0.0034 7.4E-08 53.2 8.1 89 85-186 7-96 (194)
170 TIGR01517 ATPase-IIB_Ca plasma 97.0 0.0038 8.1E-08 67.5 10.1 114 161-319 579-693 (941)
171 TIGR01689 EcbF-BcbF capsule bi 97.0 0.0033 7.1E-08 51.4 7.4 43 162-204 25-79 (126)
172 TIGR01485 SPP_plant-cyano sucr 96.9 0.0015 3.3E-08 59.3 5.8 40 283-322 172-211 (249)
173 KOG0207 Cation transport ATPas 96.9 0.0029 6.3E-08 66.1 7.6 44 161-207 723-766 (951)
174 PTZ00174 phosphomannomutase; P 96.7 0.0047 1E-07 56.2 7.3 36 283-322 193-232 (247)
175 TIGR01106 ATPase-IIC_X-K sodiu 96.7 0.0042 9.1E-08 67.5 8.0 42 160-204 567-608 (997)
176 TIGR01452 PGP_euk phosphoglyco 96.7 0.015 3.2E-07 53.9 10.4 48 162-209 19-66 (279)
177 TIGR01484 HAD-SF-IIB HAD-super 96.6 0.0027 5.9E-08 55.6 4.7 37 283-319 168-204 (204)
178 PF08282 Hydrolase_3: haloacid 96.5 0.0029 6.4E-08 56.2 4.3 38 282-319 190-227 (254)
179 KOG0202 Ca2+ transporting ATPa 96.5 0.0098 2.1E-07 61.8 8.3 117 160-320 583-703 (972)
180 PF08282 Hydrolase_3: haloacid 96.5 0.008 1.7E-07 53.4 6.8 37 165-204 19-55 (254)
181 TIGR02471 sucr_syn_bact_C sucr 96.4 0.0027 5.8E-08 57.2 3.3 37 283-319 164-200 (236)
182 TIGR01486 HAD-SF-IIB-MPGP mann 96.3 0.0047 1E-07 56.3 4.3 37 283-319 181-219 (256)
183 TIGR02245 HAD_IIID1 HAD-superf 96.3 0.025 5.4E-07 49.8 8.6 40 161-204 45-84 (195)
184 TIGR01657 P-ATPase-V P-type AT 96.2 0.031 6.8E-07 61.2 10.8 42 160-204 655-696 (1054)
185 PF05152 DUF705: Protein of un 96.2 0.023 4.9E-07 52.4 8.0 49 163-214 144-192 (297)
186 COG4030 Uncharacterized protei 96.1 0.044 9.6E-07 49.0 9.2 43 157-203 79-121 (315)
187 TIGR01494 ATPase_P-type ATPase 96.1 0.038 8.3E-07 55.5 10.2 40 161-203 347-386 (499)
188 TIGR01486 HAD-SF-IIB-MPGP mann 96.0 0.017 3.7E-07 52.6 6.7 36 167-205 22-57 (256)
189 TIGR00685 T6PP trehalose-phosp 95.8 0.011 2.4E-07 53.6 4.3 39 283-321 172-217 (244)
190 TIGR01652 ATPase-Plipid phosph 95.7 0.086 1.9E-06 57.9 11.3 43 160-205 630-672 (1057)
191 PLN02382 probable sucrose-phos 95.6 0.019 4.2E-07 56.3 5.5 40 283-322 180-222 (413)
192 COG3882 FkbH Predicted enzyme 95.6 0.1 2.2E-06 51.4 10.1 89 165-314 259-347 (574)
193 KOG3107 Predicted haloacid deh 95.3 0.77 1.7E-05 44.0 14.7 39 282-321 413-451 (468)
194 COG5610 Predicted hydrolase (H 95.2 0.043 9.4E-07 53.6 6.2 99 162-318 100-199 (635)
195 PF05822 UMPH-1: Pyrimidine 5' 95.1 0.053 1.1E-06 49.3 6.2 53 148-203 77-129 (246)
196 KOG2116 Protein involved in pl 94.6 0.2 4.3E-06 51.0 9.1 140 84-317 530-673 (738)
197 KOG1618 Predicted phosphatase 94.5 0.3 6.4E-06 45.9 9.4 35 64-100 17-51 (389)
198 PLN03190 aminophospholipid tra 94.5 0.54 1.2E-05 52.2 13.2 42 160-204 725-766 (1178)
199 PRK10444 UMP phosphatase; Prov 94.4 0.33 7.1E-06 44.3 9.7 52 162-214 18-69 (248)
200 KOG2470 Similar to IMP-GMP spe 94.4 0.1 2.2E-06 49.4 6.3 128 162-320 241-374 (510)
201 PF06189 5-nucleotidase: 5'-nu 94.3 0.44 9.6E-06 43.5 10.0 25 298-323 236-260 (264)
202 KOG2134 Polynucleotide kinase 93.8 0.12 2.5E-06 49.7 5.6 25 162-186 105-129 (422)
203 COG2216 KdpB High-affinity K+ 93.7 0.1 2.2E-06 51.8 5.1 44 162-208 448-491 (681)
204 TIGR01458 HAD-SF-IIA-hyp3 HAD- 93.7 0.14 3.1E-06 46.8 5.8 53 162-215 22-74 (257)
205 KOG2961 Predicted hydrolase (H 93.7 0.78 1.7E-05 38.7 9.4 32 292-323 137-169 (190)
206 PLN02423 phosphomannomutase 93.2 0.076 1.6E-06 48.3 3.1 35 287-322 194-232 (245)
207 TIGR01658 EYA-cons_domain eyes 93.2 0.61 1.3E-05 42.3 8.6 41 282-322 218-258 (274)
208 COG4502 5'(3')-deoxyribonucleo 92.4 0.14 3E-06 42.4 3.3 115 82-209 1-118 (180)
209 PLN02499 glycerol-3-phosphate 92.2 0.8 1.7E-05 45.8 8.9 33 169-205 101-134 (498)
210 KOG0206 P-type ATPase [General 92.0 0.33 7.1E-06 53.1 6.4 42 160-204 650-691 (1151)
211 KOG0204 Calcium transporting A 91.1 0.87 1.9E-05 48.0 8.1 43 160-205 646-688 (1034)
212 PRK14501 putative bifunctional 90.9 0.49 1.1E-05 49.9 6.4 30 283-314 662-691 (726)
213 COG5083 SMP2 Uncharacterized p 90.8 1 2.2E-05 44.1 7.7 34 283-316 482-516 (580)
214 PLN02580 trehalose-phosphatase 90.5 0.7 1.5E-05 44.9 6.5 31 282-312 305-338 (384)
215 PLN03017 trehalose-phosphatase 90.5 0.76 1.6E-05 44.3 6.7 31 283-313 288-321 (366)
216 KOG3128 Uncharacterized conser 89.8 1.1 2.3E-05 40.9 6.6 54 148-204 125-179 (298)
217 PLN02151 trehalose-phosphatase 89.7 0.83 1.8E-05 43.9 6.2 31 283-313 274-307 (354)
218 PRK09484 3-deoxy-D-manno-octul 89.0 0.2 4.3E-06 43.4 1.4 16 83-98 20-35 (183)
219 COG1877 OtsB Trehalose-6-phosp 88.4 1.2 2.7E-05 41.0 6.2 32 283-314 187-218 (266)
220 PTZ00174 phosphomannomutase; P 87.9 0.59 1.3E-05 42.4 3.8 36 81-117 2-40 (247)
221 PRK00192 mannosyl-3-phosphogly 87.8 1.1 2.3E-05 41.2 5.5 41 164-207 24-64 (273)
222 KOG2469 IMP-GMP specific 5'-nu 87.6 1.1 2.4E-05 43.4 5.5 122 166-321 203-333 (424)
223 PLN02423 phosphomannomutase 86.9 0.72 1.6E-05 41.9 3.7 30 83-113 5-35 (245)
224 PLN02205 alpha,alpha-trehalose 85.9 1.8 4E-05 46.5 6.6 28 287-314 774-801 (854)
225 KOG4549 Magnesium-dependent ph 85.7 3.6 7.8E-05 33.6 6.7 47 160-208 43-89 (144)
226 TIGR01456 CECR5 HAD-superfamil 84.8 5.7 0.00012 37.5 8.9 43 162-204 17-64 (321)
227 PF06506 PrpR_N: Propionate ca 84.7 2.4 5.2E-05 36.4 5.8 32 287-323 121-152 (176)
228 KOG0209 P-type ATPase [Inorgan 84.5 1.7 3.8E-05 45.8 5.4 153 160-322 674-834 (1160)
229 PF13344 Hydrolase_6: Haloacid 84.4 0.5 1.1E-05 36.8 1.3 31 87-117 1-32 (101)
230 TIGR02463 MPGP_rel mannosyl-3- 84.2 2.3 4.9E-05 37.5 5.6 36 166-204 21-56 (221)
231 TIGR01487 SPP-like sucrose-pho 83.4 2.4 5.1E-05 37.3 5.3 41 163-206 20-60 (215)
232 TIGR02329 propionate_PrpR prop 81.1 14 0.0003 37.6 10.4 32 287-323 141-172 (526)
233 PRK01158 phosphoglycolate phos 81.0 3.3 7.2E-05 36.5 5.4 40 164-206 23-62 (230)
234 TIGR00099 Cof-subfamily Cof su 80.5 3.7 7.9E-05 37.1 5.6 38 165-205 20-57 (256)
235 PRK10513 sugar phosphate phosp 80.0 4.4 9.5E-05 36.8 6.0 38 165-205 24-61 (270)
236 PRK15126 thiamin pyrimidine py 79.9 3.8 8.3E-05 37.3 5.5 39 165-206 23-61 (272)
237 COG0731 Fe-S oxidoreductases [ 79.6 11 0.00024 35.3 8.4 40 157-202 88-128 (296)
238 TIGR00685 T6PP trehalose-phosp 79.4 1.1 2.5E-05 40.4 1.8 15 84-98 3-17 (244)
239 PRK10976 putative hydrolase; P 78.4 4.4 9.6E-05 36.7 5.4 38 165-205 23-60 (266)
240 KOG0323 TFIIF-interacting CTD 78.2 3.5 7.5E-05 42.6 5.0 54 159-216 199-253 (635)
241 PRK10530 pyridoxal phosphate ( 77.5 4.9 0.00011 36.4 5.4 38 165-205 24-61 (272)
242 COG0561 Cof Predicted hydrolas 77.0 5.6 0.00012 36.1 5.7 41 162-205 21-61 (264)
243 TIGR01482 SPP-subfamily Sucros 76.7 5.4 0.00012 35.0 5.3 38 165-205 19-56 (225)
244 PLN03063 alpha,alpha-trehalose 76.0 5.6 0.00012 42.5 6.1 37 161-200 532-569 (797)
245 KOG0203 Na+/K+ ATPase, alpha s 75.8 2.5 5.4E-05 44.7 3.3 135 160-319 589-730 (1019)
246 PRK15424 propionate catabolism 74.8 26 0.00056 35.8 10.3 32 286-322 150-181 (538)
247 PLN03064 alpha,alpha-trehalose 74.5 7.8 0.00017 42.1 6.7 40 160-202 621-661 (934)
248 TIGR02471 sucr_syn_bact_C sucr 73.3 2.2 4.8E-05 38.1 2.0 15 86-100 1-15 (236)
249 PRK12702 mannosyl-3-phosphogly 72.8 8.9 0.00019 36.0 5.8 33 84-117 1-36 (302)
250 PRK14501 putative bifunctional 72.1 5 0.00011 42.4 4.6 36 162-200 515-551 (726)
251 TIGR01668 YqeG_hyp_ppase HAD s 71.9 3.6 7.7E-05 35.0 2.9 19 82-100 23-41 (170)
252 PRK03669 mannosyl-3-phosphogly 71.4 8.3 0.00018 35.2 5.4 36 166-204 29-64 (271)
253 PRK11840 bifunctional sulfur c 69.9 25 0.00053 33.5 8.1 37 283-323 241-280 (326)
254 PRK06769 hypothetical protein; 69.2 4.6 9.9E-05 34.5 2.9 16 83-98 3-18 (173)
255 COG4850 Uncharacterized conser 68.9 23 0.00051 33.6 7.6 28 159-186 194-222 (373)
256 PF13580 SIS_2: SIS domain; PD 68.8 59 0.0013 26.5 9.5 40 283-322 92-138 (138)
257 KOG0210 P-type ATPase [Inorgan 68.8 9.3 0.0002 39.9 5.3 25 161-185 658-682 (1051)
258 cd04728 ThiG Thiazole synthase 68.7 38 0.00083 30.9 8.8 41 160-205 103-147 (248)
259 PLN02205 alpha,alpha-trehalose 67.8 11 0.00024 40.6 6.1 15 84-98 596-610 (854)
260 KOG2882 p-Nitrophenyl phosphat 66.6 17 0.00038 34.0 6.3 103 83-185 21-133 (306)
261 PRK00208 thiG thiazole synthas 66.3 46 0.00099 30.4 8.8 41 160-205 103-147 (250)
262 PRK00994 F420-dependent methyl 66.2 79 0.0017 28.8 10.0 36 283-321 79-116 (277)
263 PLN02580 trehalose-phosphatase 64.8 9.8 0.00021 37.1 4.5 16 84-99 119-134 (384)
264 COG3769 Predicted hydrolase (H 64.1 8 0.00017 34.8 3.4 35 83-117 6-41 (274)
265 KOG3189 Phosphomannomutase [Li 63.6 7 0.00015 34.5 2.9 28 85-113 12-39 (252)
266 smart00577 CPDc catalytic doma 61.8 5.2 0.00011 33.1 1.8 16 84-99 2-17 (148)
267 TIGR01484 HAD-SF-IIB HAD-super 60.3 19 0.0004 31.1 5.2 36 163-201 19-54 (204)
268 TIGR03470 HpnH hopanoid biosyn 57.8 53 0.0012 30.9 8.1 25 162-186 85-109 (318)
269 PF02358 Trehalose_PPase: Treh 55.3 9.2 0.0002 34.2 2.4 34 283-316 170-206 (235)
270 TIGR02251 HIF-SF_euk Dullard-l 53.1 7.9 0.00017 32.7 1.5 16 85-100 2-17 (162)
271 PLN02382 probable sucrose-phos 52.0 17 0.00036 35.8 3.8 15 84-98 9-23 (413)
272 COG0036 Rpe Pentose-5-phosphat 51.7 1.8E+02 0.0039 26.1 10.6 41 162-203 94-134 (220)
273 TIGR02826 RNR_activ_nrdG3 anae 51.0 33 0.00072 28.6 4.9 35 163-199 74-108 (147)
274 KOG1618 Predicted phosphatase 50.6 11 0.00023 35.8 2.0 31 293-323 296-342 (389)
275 TIGR02250 FCP1_euk FCP1-like p 50.1 11 0.00023 31.8 1.9 19 83-101 5-23 (156)
276 PF05690 ThiG: Thiazole biosyn 47.1 1.7E+02 0.0037 26.7 9.0 96 160-322 103-205 (247)
277 PLN02887 hydrolase family prot 46.7 36 0.00077 35.1 5.3 41 161-204 325-365 (580)
278 PRK14502 bifunctional mannosyl 46.5 39 0.00084 35.5 5.5 37 166-205 438-474 (694)
279 TIGR01485 SPP_plant-cyano sucr 46.0 31 0.00068 30.9 4.4 38 165-205 25-62 (249)
280 COG0019 LysA Diaminopimelate d 45.7 1.2E+02 0.0026 29.7 8.6 38 284-322 87-126 (394)
281 PF04123 DUF373: Domain of unk 45.0 91 0.002 30.0 7.4 24 283-308 90-113 (344)
282 CHL00162 thiG thiamin biosynth 44.8 1.5E+02 0.0033 27.3 8.4 97 160-323 117-220 (267)
283 PRK08883 ribulose-phosphate 3- 44.7 2.3E+02 0.0049 25.2 10.4 39 163-202 92-130 (220)
284 COG0241 HisB Histidinol phosph 43.6 15 0.00033 31.9 1.8 17 84-100 5-21 (181)
285 PRK13762 tRNA-modifying enzyme 43.5 46 0.00099 31.6 5.2 27 160-186 141-167 (322)
286 KOG0208 Cation transport ATPas 43.5 81 0.0018 34.5 7.3 46 160-208 704-749 (1140)
287 PRK08005 epimerase; Validated 43.0 1E+02 0.0023 27.3 7.1 36 164-200 93-128 (210)
288 PF10307 DUF2410: Hypothetical 42.2 2.4E+02 0.0053 24.8 9.9 29 283-312 123-151 (197)
289 COG2099 CobK Precorrin-6x redu 42.2 1.4E+02 0.0029 27.5 7.7 35 285-322 190-230 (257)
290 TIGR02468 sucrsPsyn_pln sucros 39.6 33 0.00072 37.8 4.0 39 281-320 959-1000(1050)
291 COG3273 Uncharacterized conser 39.6 48 0.001 29.0 4.2 62 247-323 88-155 (204)
292 PF02254 TrkA_N: TrkA-N domain 39.2 1.7E+02 0.0038 22.3 9.1 26 295-320 90-115 (116)
293 TIGR02495 NrdG2 anaerobic ribo 38.7 89 0.0019 26.6 6.0 25 162-186 75-99 (191)
294 PRK10076 pyruvate formate lyas 38.7 68 0.0015 28.5 5.3 38 162-200 51-89 (213)
295 KOG2832 TFIIF-interacting CTD 38.4 58 0.0013 31.5 4.9 49 160-212 213-261 (393)
296 PRK13125 trpA tryptophan synth 37.5 2.7E+02 0.0059 25.0 9.2 36 164-200 116-151 (244)
297 TIGR00236 wecB UDP-N-acetylglu 37.1 2.4E+02 0.0051 26.5 9.1 37 283-321 78-117 (365)
298 PF07859 Abhydrolase_3: alpha/ 35.9 31 0.00066 29.6 2.6 34 273-306 46-82 (211)
299 PF02350 Epimerase_2: UDP-N-ac 35.2 1.9E+02 0.0041 27.6 8.1 32 283-321 252-284 (346)
300 PF14336 DUF4392: Domain of un 35.2 51 0.0011 30.8 4.1 39 163-203 62-100 (291)
301 PRK10537 voltage-gated potassi 34.6 3.5E+02 0.0075 26.5 9.9 34 286-320 322-355 (393)
302 PRK14021 bifunctional shikimat 33.9 5.3E+02 0.011 26.3 11.4 35 288-322 263-303 (542)
303 COG1454 EutG Alcohol dehydroge 32.7 3E+02 0.0065 26.8 9.0 42 164-205 14-57 (377)
304 PRK08745 ribulose-phosphate 3- 32.6 2E+02 0.0044 25.7 7.3 36 164-200 97-132 (223)
305 PLN02334 ribulose-phosphate 3- 32.6 2.5E+02 0.0055 24.8 8.1 27 296-322 176-203 (229)
306 cd06831 PLPDE_III_ODC_like_AZI 32.5 4.4E+02 0.0095 25.6 10.3 34 288-321 74-109 (394)
307 COG0263 ProB Glutamate 5-kinas 31.7 3E+02 0.0065 26.6 8.5 35 165-205 32-66 (369)
308 PF02358 Trehalose_PPase: Treh 31.5 77 0.0017 28.1 4.5 13 88-100 1-13 (235)
309 TIGR02109 PQQ_syn_pqqE coenzym 31.1 1E+02 0.0022 29.3 5.5 26 162-187 66-91 (358)
310 PRK05301 pyrroloquinoline quin 31.0 1.1E+02 0.0024 29.3 5.8 44 160-204 73-116 (378)
311 cd01445 TST_Repeats Thiosulfat 30.7 1.1E+02 0.0023 25.0 4.9 41 283-323 83-131 (138)
312 cd07043 STAS_anti-anti-sigma_f 30.2 1.1E+02 0.0024 22.4 4.6 38 166-208 59-96 (99)
313 TIGR03151 enACPred_II putative 30.1 2.7E+02 0.0059 26.1 8.1 37 283-322 153-191 (307)
314 TIGR02886 spore_II_AA anti-sig 30.0 1.1E+02 0.0023 23.2 4.6 36 168-208 62-97 (106)
315 TIGR03365 Bsubt_queE 7-cyano-7 29.5 52 0.0011 29.6 3.1 26 162-187 85-110 (238)
316 PRK09348 glyQ glycyl-tRNA synt 29.2 57 0.0012 29.9 3.1 47 262-318 84-133 (283)
317 COG3769 Predicted hydrolase (H 28.5 88 0.0019 28.3 4.1 37 165-204 27-63 (274)
318 cd05008 SIS_GlmS_GlmD_1 SIS (S 28.3 83 0.0018 24.6 3.8 24 163-186 59-82 (126)
319 cd00733 GlyRS_alpha_core Class 28.3 63 0.0014 29.6 3.2 47 262-318 80-129 (279)
320 COG0191 Fba Fructose/tagatose 28.1 4.4E+02 0.0095 24.7 8.8 38 283-322 67-106 (286)
321 PRK05752 uroporphyrinogen-III 27.1 2.1E+02 0.0045 25.8 6.6 23 161-183 10-32 (255)
322 PF04309 G3P_antiterm: Glycero 27.1 4.1E+02 0.0089 22.9 8.3 106 167-321 61-169 (175)
323 PRK08091 ribulose-phosphate 3- 27.0 2.8E+02 0.006 25.0 7.2 36 164-200 103-140 (228)
324 TIGR00262 trpA tryptophan synt 26.4 4.9E+02 0.011 23.6 9.2 25 298-322 201-228 (256)
325 PF09269 DUF1967: Domain of un 26.3 63 0.0014 23.2 2.4 21 283-303 45-65 (69)
326 PF04413 Glycos_transf_N: 3-De 26.0 95 0.0021 26.8 4.0 22 286-307 163-184 (186)
327 TIGR00388 glyQ glycyl-tRNA syn 25.9 73 0.0016 29.4 3.2 47 262-318 81-130 (293)
328 cd04906 ACT_ThrD-I_1 First of 25.7 1.2E+02 0.0025 22.4 3.9 22 164-185 53-74 (85)
329 PF10113 Fibrillarin_2: Fibril 25.5 1.9E+02 0.0041 28.7 6.0 41 283-323 211-255 (505)
330 cd05014 SIS_Kpsf KpsF-like pro 25.4 77 0.0017 24.9 3.1 25 162-186 59-83 (128)
331 PRK10422 lipopolysaccharide co 25.4 5.7E+02 0.012 24.0 9.6 24 298-321 265-288 (352)
332 COG2237 Predicted membrane pro 25.3 2.4E+02 0.0053 27.2 6.7 22 284-307 91-112 (364)
333 TIGR00377 ant_ant_sig anti-ant 25.3 1.3E+02 0.0029 22.6 4.3 38 167-209 65-102 (108)
334 TIGR03568 NeuC_NnaA UDP-N-acet 24.8 6E+02 0.013 24.2 9.6 26 297-322 283-308 (365)
335 TIGR03278 methan_mark_10 putat 24.6 1.7E+02 0.0038 28.7 5.8 46 160-205 85-131 (404)
336 COG1180 PflA Pyruvate-formate 24.5 1.5E+02 0.0032 27.2 5.1 27 161-187 96-122 (260)
337 PF06014 DUF910: Bacterial pro 23.6 58 0.0012 23.1 1.7 25 283-311 7-31 (62)
338 TIGR03595 Obg_CgtA_exten Obg f 23.5 96 0.0021 22.3 2.9 21 283-303 45-65 (69)
339 PRK11303 DNA-binding transcrip 23.2 5.7E+02 0.012 23.2 9.7 36 284-319 254-290 (328)
340 PRK11145 pflA pyruvate formate 23.1 1.7E+02 0.0037 26.1 5.2 25 162-186 83-108 (246)
341 TIGR02244 HAD-IG-Ncltidse HAD 22.9 45 0.00097 32.0 1.4 19 81-99 9-27 (343)
342 cd04795 SIS SIS domain. SIS (S 22.8 96 0.0021 22.2 3.0 22 163-184 60-81 (87)
343 TIGR00640 acid_CoA_mut_C methy 22.6 1.6E+02 0.0035 23.9 4.5 45 163-209 67-112 (132)
344 PF01861 DUF43: Protein of unk 22.4 3.4E+02 0.0073 24.8 6.8 62 258-320 10-72 (243)
345 cd02071 MM_CoA_mut_B12_BD meth 22.2 2.2E+02 0.0047 22.5 5.1 45 162-209 63-109 (122)
346 PF00875 DNA_photolyase: DNA p 22.0 1.2E+02 0.0027 25.1 3.8 40 165-207 54-93 (165)
347 COG0761 lytB 4-Hydroxy-3-methy 21.9 3.1E+02 0.0066 25.7 6.5 37 283-323 230-266 (294)
348 PRK09423 gldA glycerol dehydro 21.8 5.5E+02 0.012 24.5 8.7 30 293-322 84-116 (366)
349 PF05240 APOBEC_C: APOBEC-like 21.8 1E+02 0.0022 21.3 2.6 22 164-185 2-23 (55)
350 PF02350 Epimerase_2: UDP-N-ac 21.6 4.7E+02 0.01 24.9 8.1 39 283-323 59-100 (346)
351 cd03784 GT1_Gtf_like This fami 21.6 4.8E+02 0.01 24.7 8.3 33 166-204 17-49 (401)
352 cd01766 Ufm1 Urm1-like ubiquit 21.5 1.1E+02 0.0023 22.6 2.7 33 283-315 32-64 (82)
353 KOG1605 TFIIF-interacting CTD 21.4 80 0.0017 29.1 2.7 40 160-203 130-169 (262)
354 COG0752 GlyQ Glycyl-tRNA synth 21.3 95 0.0021 28.4 3.0 47 261-317 84-133 (298)
355 PF01890 CbiG_C: Cobalamin syn 21.3 2.4E+02 0.0053 22.5 5.2 47 275-321 13-65 (121)
356 cd05013 SIS_RpiR RpiR-like pro 20.9 1.3E+02 0.0029 23.4 3.7 23 164-186 74-96 (139)
357 cd05710 SIS_1 A subgroup of th 20.7 1.3E+02 0.0028 23.7 3.5 24 163-186 60-83 (120)
358 PF01380 SIS: SIS domain SIS d 20.6 1.5E+02 0.0033 23.0 3.9 25 162-186 65-89 (131)
359 KOG3157 Proline synthetase co- 20.6 3.5E+02 0.0077 24.2 6.3 40 283-322 192-231 (244)
360 PF11848 DUF3368: Domain of un 20.5 2E+02 0.0043 18.9 3.8 31 162-201 17-47 (48)
361 COG2896 MoaA Molybdenum cofact 20.5 1.8E+02 0.0039 27.7 4.9 44 160-205 70-114 (322)
362 PF03033 Glyco_transf_28: Glyc 20.4 1.2E+02 0.0027 23.8 3.4 32 167-204 16-47 (139)
363 TIGR02493 PFLA pyruvate format 20.3 2.3E+02 0.005 24.8 5.5 25 162-186 78-103 (235)
364 TIGR02494 PFLE_PFLC glycyl-rad 20.2 1.9E+02 0.0041 26.6 5.0 26 161-186 137-163 (295)
365 KOG3309 Ferredoxin [Energy pro 20.1 3.4E+02 0.0073 23.0 5.8 36 82-118 42-77 (159)
366 PF05343 Peptidase_M42: M42 gl 20.0 4.8E+02 0.01 24.3 7.6 46 274-320 220-267 (292)
No 1
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.96 E-value=2.3e-28 Score=219.35 Aligned_cols=176 Identities=24% Similarity=0.321 Sum_probs=137.9
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHh---------HHH-HH-
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN---------RKN-AL- 151 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~-~~- 151 (323)
.+|+|||||||||+||+.. +.++|.++++++|+. .+.+.+....+............... ... .+
T Consensus 1 ~~~avIFD~DGvLvDse~~-~~~a~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPL-HARAWLEALKEYGIE---ISDEEIRELHGGGIARIIDLLRKLAAGEDPADLAELERLLYE 76 (221)
T ss_pred CCcEEEEcCCCCcCcchHH-HHHHHHHHHHHcCCC---CCHHHHHHHHCCChHHHHHHHHHHhcCCcccCHHHHHHHHHH
Confidence 3689999999999999997 999999999999997 35555555544332222221111110 011 11
Q ss_pred HHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccccc
Q 020675 152 DEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGI 231 (323)
Q Consensus 152 ~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v 231 (323)
.........+++||+.++|+.|+++|+++++.|+ +....+...++.+|+.++|+.+ ++++++.+
T Consensus 77 ~~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~---s~~~~~~~~L~~~gl~~~f~~~-v~~~dv~~------------ 140 (221)
T COG0637 77 AEALELEGLKPIPGVVELLEQLKARGIPLAVASS---SPRRAAERVLARLGLLDYFDVI-VTADDVAR------------ 140 (221)
T ss_pred HHHhhhcCCCCCccHHHHHHHHHhcCCcEEEecC---ChHHHHHHHHHHccChhhcchh-ccHHHHhc------------
Confidence 1112234688999999999999999999999999 5678899999999999999985 55555544
Q ss_pred ccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHH
Q 020675 232 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQ 311 (323)
Q Consensus 232 ~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~ 311 (323)
.||+|++ |..+++++|++|++||.|+|+.++|++|+
T Consensus 141 ------------------------------~KP~Pd~--------------yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~ 176 (221)
T COG0637 141 ------------------------------GKPAPDI--------------YLLAAERLGVDPEECVVVEDSPAGIQAAK 176 (221)
T ss_pred ------------------------------CCCCCHH--------------HHHHHHHcCCChHHeEEEecchhHHHHHH
Confidence 2999999 99999999999999999999999999999
Q ss_pred HcCCCEEEEcC
Q 020675 312 RIGMPCVVMRS 322 (323)
Q Consensus 312 ~aG~~~v~v~~ 322 (323)
+|||.+|+|.+
T Consensus 177 aAGm~vv~v~~ 187 (221)
T COG0637 177 AAGMRVVGVPA 187 (221)
T ss_pred HCCCEEEEecC
Confidence 99999999975
No 2
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.96 E-value=9.3e-28 Score=218.91 Aligned_cols=180 Identities=19% Similarity=0.243 Sum_probs=136.7
Q ss_pred CCCCCceEEEEecCCccccccccchHHHHHHHHHHcCCCC-CCCCHHHH-HHHHcccCCcHHHHHHHH-----------H
Q 020675 79 QNPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDC-ANWTAPIY-TDLLRKSAGDEDRMLVLF-----------F 145 (323)
Q Consensus 79 ~~~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~-----------~ 145 (323)
....++|+|||||||||+|+... +..+|+++++++|... ..++.+.+ ..+.+.. ....+... .
T Consensus 17 ~~~~~~k~viFDlDGTLiDs~~~-~~~a~~~~~~~~g~~~g~~~~~~~~~~~~~G~~---~~~~~~~~~~~~~~~~~~~~ 92 (248)
T PLN02770 17 SGLAPLEAVLFDVDGTLCDSDPL-HYYAFREMLQEINFNGGVPITEEFFVENIAGKH---NEDIALGLFPDDLERGLKFT 92 (248)
T ss_pred cccCccCEEEEcCCCccCcCHHH-HHHHHHHHHHHhccccCCCCCHHHHHHHcCCCC---HHHHHHHHcCcchhhHHHHH
Confidence 34456899999999999999986 8999999999997531 12334332 2223321 11111111 0
Q ss_pred h-HHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcc
Q 020675 146 N-RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQ 224 (323)
Q Consensus 146 ~-~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~ 224 (323)
. ....|.+.. .....++||+.++|+.|+++|++++|+|| +....++..++++|+.++|+.+ ++++++..
T Consensus 93 ~~~~~~y~~~~-~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn---~~~~~~~~~l~~~gl~~~Fd~i-v~~~~~~~----- 162 (248)
T PLN02770 93 DDKEALFRKLA-SEQLKPLNGLYKLKKWIEDRGLKRAAVTN---APRENAELMISLLGLSDFFQAV-IIGSECEH----- 162 (248)
T ss_pred HHHHHHHHHHH-HhcCCcCccHHHHHHHHHHcCCeEEEEeC---CCHHHHHHHHHHcCChhhCcEE-EecCcCCC-----
Confidence 0 122333322 23477999999999999999999999999 5679999999999999999975 45544432
Q ss_pred cccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh
Q 020675 225 FVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ 304 (323)
Q Consensus 225 ~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~ 304 (323)
.||+|++ |..+++++|++|++|++|||+.
T Consensus 163 -------------------------------------~KP~p~~--------------~~~a~~~~~~~~~~~l~vgDs~ 191 (248)
T PLN02770 163 -------------------------------------AKPHPDP--------------YLKALEVLKVSKDHTFVFEDSV 191 (248)
T ss_pred -------------------------------------CCCChHH--------------HHHHHHHhCCChhHEEEEcCCH
Confidence 3999999 9999999999999999999999
Q ss_pred hhHHHHHHcCCCEEEEcCC
Q 020675 305 SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 305 ~Di~aA~~aG~~~v~v~~g 323 (323)
.|+++|+++||.+|+|.+|
T Consensus 192 ~Di~aA~~aGi~~i~v~~g 210 (248)
T PLN02770 192 SGIKAGVAAGMPVVGLTTR 210 (248)
T ss_pred HHHHHHHHCCCEEEEEeCC
Confidence 9999999999999999764
No 3
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.95 E-value=1.7e-27 Score=212.04 Aligned_cols=179 Identities=11% Similarity=0.098 Sum_probs=136.1
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHH-HHH-hHHHHHHHHH---h
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLV-LFF-NRKNALDEFL---A 156 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~i---~ 156 (323)
|.+|+|+||+||||+|+... +..+|++++++++... .+.+.+....+........... ... .....+.+.. .
T Consensus 1 m~~~~viFD~DGTL~ds~~~-~~~a~~~~~~~~~~~~--~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (214)
T PRK13288 1 MKINTVLFDLDGTLINTNEL-IISSFLHTLKTYYPNQ--YKREDVLPFIGPSLHDTFSKIDESKVEEMITTYREFNHEHH 77 (214)
T ss_pred CCccEEEEeCCCcCccCHHH-HHHHHHHHHHHhCCCC--CCHHHHHHHhCcCHHHHHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 56899999999999999986 8999999999988652 3455555555533111110000 000 0011122211 1
Q ss_pred cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcc
Q 020675 157 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 236 (323)
Q Consensus 157 ~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~ 236 (323)
....+++||+.++|+.|+++|++++|+|| +....+...++.+|+..+|+.+ ++.++...
T Consensus 78 ~~~~~~~~g~~~~l~~L~~~g~~~~i~S~---~~~~~~~~~l~~~gl~~~f~~i-~~~~~~~~----------------- 136 (214)
T PRK13288 78 DELVTEYETVYETLKTLKKQGYKLGIVTT---KMRDTVEMGLKLTGLDEFFDVV-ITLDDVEH----------------- 136 (214)
T ss_pred hhhcccCcCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCChhceeEE-EecCcCCC-----------------
Confidence 23467999999999999999999999999 5678899999999999999975 45444322
Q ss_pred hhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCC
Q 020675 237 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 316 (323)
Q Consensus 237 ~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~ 316 (323)
.||+|++ |+.+++++|++|+++++|||+.+|+++|+++|+.
T Consensus 137 -------------------------~Kp~p~~--------------~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~ 177 (214)
T PRK13288 137 -------------------------AKPDPEP--------------VLKALELLGAKPEEALMVGDNHHDILAGKNAGTK 177 (214)
T ss_pred -------------------------CCCCcHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 3999999 9999999999999999999999999999999999
Q ss_pred EEEEcCC
Q 020675 317 CVVMRSR 323 (323)
Q Consensus 317 ~v~v~~g 323 (323)
+|+|.+|
T Consensus 178 ~i~v~~g 184 (214)
T PRK13288 178 TAGVAWT 184 (214)
T ss_pred EEEEcCC
Confidence 9999875
No 4
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.95 E-value=3.3e-27 Score=215.54 Aligned_cols=176 Identities=17% Similarity=0.126 Sum_probs=131.1
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcH-----------------------HHH
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE-----------------------DRM 140 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~ 140 (323)
+|+||||+||||+|+....+..+++++++++|.+ ++.+.+...++...... ...
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~---~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQ---ITLEEARGPMGLGKWDHIRALLKMPAVAERWRAKFGRLPTEAD 78 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCC---ccHHHHHHhcCccHHHHHHHHhcCHHHHHHHHHHhCCCCCHHH
Confidence 6899999999999986532578999999999986 34444433333221000 000
Q ss_pred HHHHHh-HHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccc-cceeechhhhh
Q 020675 141 LVLFFN-RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS-KIKIVGNEEVE 218 (323)
Q Consensus 141 ~~~~~~-~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~f-d~~v~s~~~~~ 218 (323)
....+. ..+.+.+.+ .....++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+| +. +++++++.
T Consensus 79 ~~~~~~~~~~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~l~IvT~---~~~~~~~~~l~~~gl~~~f~d~-ii~~~~~~ 153 (253)
T TIGR01422 79 IEAIYEAFEPLQLAKL-AEYSSPIPGVIEVIAYLRARGIKIGSTTG---YTREMMDVVAPEAALQGYRPDY-NVTTDDVP 153 (253)
T ss_pred HHHHHHHHHHHHHHHH-HhcCccCCCHHHHHHHHHHCCCeEEEECC---CcHHHHHHHHHHHHhcCCCCce-EEccccCC
Confidence 000000 011112222 23477999999999999999999999999 5678899999999999986 65 46665543
Q ss_pred hhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCC-CCcE
Q 020675 219 RSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNC 297 (323)
Q Consensus 219 ~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~-p~~~ 297 (323)
. .||+|++ |..+++++|+. |++|
T Consensus 154 ~------------------------------------------~KP~p~~--------------~~~a~~~l~~~~~~~~ 177 (253)
T TIGR01422 154 A------------------------------------------GRPAPWM--------------ALKNAIELGVYDVAAC 177 (253)
T ss_pred C------------------------------------------CCCCHHH--------------HHHHHHHcCCCCchhe
Confidence 3 3999999 99999999995 9999
Q ss_pred EEEcCChhhHHHHHHcCCCEEEEcCC
Q 020675 298 FLIAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 298 v~VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
++|||+.+|+++|+++||.+|+|.+|
T Consensus 178 l~IGDs~~Di~aA~~aGi~~i~v~~g 203 (253)
T TIGR01422 178 VKVGDTVPDIEEGRNAGMWTVGLILS 203 (253)
T ss_pred EEECCcHHHHHHHHHCCCeEEEEecC
Confidence 99999999999999999999999875
No 5
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.95 E-value=3.4e-27 Score=216.57 Aligned_cols=179 Identities=23% Similarity=0.252 Sum_probs=134.6
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHH----------HHHHhHHHH
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRML----------VLFFNRKNA 150 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 150 (323)
...+|+|||||||||+|+....+..+|+++++++|++. ...+.+..+.+.......+.. .........
T Consensus 21 ~~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~--~~~e~~~~~~G~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ 98 (260)
T PLN03243 21 GCGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRP--PPAFLLKRAEGMKNEQAISEVLCWSRDFLQMKRLAIRKED 98 (260)
T ss_pred cCCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCC--CHHHHHHHhcCCCHHHHHHHHhccCCCHHHHHHHHHHHHH
Confidence 45688999999999999964226789999999999873 223344445454322111111 000111111
Q ss_pred HHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccc
Q 020675 151 LDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 230 (323)
Q Consensus 151 ~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~ 230 (323)
+..........++||+.++|+.|+++|++++|+|| +....++.+++++|+..+|+.+ ++++++..
T Consensus 99 ~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn---~~~~~~~~~l~~~gl~~~Fd~i-i~~~d~~~----------- 163 (260)
T PLN03243 99 LYEYMQGGLYRLRPGSREFVQALKKHEIPIAVAST---RPRRYLERAIEAVGMEGFFSVV-LAAEDVYR----------- 163 (260)
T ss_pred HHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeC---cCHHHHHHHHHHcCCHhhCcEE-EecccCCC-----------
Confidence 11222234577999999999999999999999999 5678899999999999999985 44444432
Q ss_pred cccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHH
Q 020675 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGA 310 (323)
Q Consensus 231 v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA 310 (323)
.||+|++ |..+++++|++|++|+||||+..|+++|
T Consensus 164 -------------------------------~KP~Pe~--------------~~~a~~~l~~~p~~~l~IgDs~~Di~aA 198 (260)
T PLN03243 164 -------------------------------GKPDPEM--------------FMYAAERLGFIPERCIVFGNSNSSVEAA 198 (260)
T ss_pred -------------------------------CCCCHHH--------------HHHHHHHhCCChHHeEEEcCCHHHHHHH
Confidence 3999999 9999999999999999999999999999
Q ss_pred HHcCCCEEEEc
Q 020675 311 QRIGMPCVVMR 321 (323)
Q Consensus 311 ~~aG~~~v~v~ 321 (323)
+++||.+|+|.
T Consensus 199 ~~aG~~~i~v~ 209 (260)
T PLN03243 199 HDGCMKCVAVA 209 (260)
T ss_pred HHcCCEEEEEe
Confidence 99999999986
No 6
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.95 E-value=3.5e-27 Score=212.59 Aligned_cols=176 Identities=19% Similarity=0.218 Sum_probs=134.4
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHH---------HHHHHh-HHHHHHH
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRM---------LVLFFN-RKNALDE 153 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~-~~~~~~~ 153 (323)
+|+||||+||||+|+... +..+++.+++++|.+. ++.+.+....+......... ...... ..+.|.+
T Consensus 12 ~k~viFD~DGTL~Ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (229)
T PRK13226 12 PRAVLFDLDGTLLDSAPD-MLATVNAMLAARGRAP--ITLAQLRPVVSKGARAMLAVAFPELDAAARDALIPEFLQRYEA 88 (229)
T ss_pred CCEEEEcCcCccccCHHH-HHHHHHHHHHHCCCCC--CCHHHHHHHhhhHHHHHHHHHhccCChHHHHHHHHHHHHHHHH
Confidence 479999999999999996 9999999999999873 56655554444221110000 000000 0222322
Q ss_pred HHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccccccc
Q 020675 154 FLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISS 233 (323)
Q Consensus 154 ~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~ 233 (323)
.+. ...+++||+.++|+.|+++|++++|+|| +....+...++.+|+..+|+.+ +++++..
T Consensus 89 ~~~-~~~~~~pg~~~~L~~L~~~g~~l~i~Tn---~~~~~~~~~l~~~~l~~~f~~i-~~~~~~~--------------- 148 (229)
T PRK13226 89 LIG-TQSQLFDGVEGMLQRLECAGCVWGIVTN---KPEYLARLILPQLGWEQRCAVL-IGGDTLA--------------- 148 (229)
T ss_pred hhh-hcCeeCCCHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCchhcccEE-EecCcCC---------------
Confidence 222 2467999999999999999999999999 5567888899999999999864 4544332
Q ss_pred CcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHc
Q 020675 234 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 313 (323)
Q Consensus 234 ~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~a 313 (323)
..||+|++ |..+++++|++|++|+||||+.+|+++|+++
T Consensus 149 ---------------------------~~KP~p~~--------------~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~a 187 (229)
T PRK13226 149 ---------------------------ERKPHPLP--------------LLVAAERIGVAPTDCVYVGDDERDILAARAA 187 (229)
T ss_pred ---------------------------CCCCCHHH--------------HHHHHHHhCCChhhEEEeCCCHHHHHHHHHC
Confidence 23999999 9999999999999999999999999999999
Q ss_pred CCCEEEEcCC
Q 020675 314 GMPCVVMRSR 323 (323)
Q Consensus 314 G~~~v~v~~g 323 (323)
||.+|+|.+|
T Consensus 188 G~~~i~v~~g 197 (229)
T PRK13226 188 GMPSVAALWG 197 (229)
T ss_pred CCcEEEEeec
Confidence 9999999775
No 7
>PRK11587 putative phosphatase; Provisional
Probab=99.95 E-value=4.8e-27 Score=209.94 Aligned_cols=172 Identities=20% Similarity=0.286 Sum_probs=127.2
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHH------------HhHHH
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF------------FNRKN 149 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~ 149 (323)
|.+|+|||||||||+|+... +..+++++++++|++. .+....+.+.. ....+..+ +....
T Consensus 1 M~~k~viFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~----~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (218)
T PRK11587 1 MRCKGFLFDLDGTLVDSLPA-VERAWSNWADRHGIAP----DEVLNFIHGKQ---AITSLRHFMAGASEAEIQAEFTRLE 72 (218)
T ss_pred CCCCEEEEcCCCCcCcCHHH-HHHHHHHHHHHcCCCH----HHHHHHHcCCC---HHHHHHHHhccCCcHHHHHHHHHHH
Confidence 57899999999999999986 8999999999999862 22222222221 11111111 10001
Q ss_pred HHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccc
Q 020675 150 ALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGK 229 (323)
Q Consensus 150 ~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~ 229 (323)
.+... ......++||+.++|+.|+++|++++|+||. ........++.+++. +|+. +++.+++..
T Consensus 73 ~~~~~-~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~---~~~~~~~~l~~~~l~-~~~~-i~~~~~~~~---------- 136 (218)
T PRK11587 73 QIEAT-DTEGITALPGAIALLNHLNKLGIPWAIVTSG---SVPVASARHKAAGLP-APEV-FVTAERVKR---------- 136 (218)
T ss_pred HHHHh-hhcCceeCcCHHHHHHHHHHcCCcEEEEcCC---CchHHHHHHHhcCCC-CccE-EEEHHHhcC----------
Confidence 11111 1235779999999999999999999999994 456667778888884 4654 455544422
Q ss_pred ccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHH
Q 020675 230 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAG 309 (323)
Q Consensus 230 ~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~a 309 (323)
.||+|++ |..+++++|+.|++|+||||+..|+++
T Consensus 137 --------------------------------~KP~p~~--------------~~~~~~~~g~~p~~~l~igDs~~di~a 170 (218)
T PRK11587 137 --------------------------------GKPEPDA--------------YLLGAQLLGLAPQECVVVEDAPAGVLS 170 (218)
T ss_pred --------------------------------CCCCcHH--------------HHHHHHHcCCCcccEEEEecchhhhHH
Confidence 3999999 999999999999999999999999999
Q ss_pred HHHcCCCEEEEcCC
Q 020675 310 AQRIGMPCVVMRSR 323 (323)
Q Consensus 310 A~~aG~~~v~v~~g 323 (323)
|+++||.+|+|.++
T Consensus 171 A~~aG~~~i~v~~~ 184 (218)
T PRK11587 171 GLAAGCHVIAVNAP 184 (218)
T ss_pred HHHCCCEEEEECCC
Confidence 99999999999763
No 8
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.95 E-value=1.7e-26 Score=206.93 Aligned_cols=179 Identities=21% Similarity=0.246 Sum_probs=138.0
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHH---------HHHh-HHHHH
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLV---------LFFN-RKNAL 151 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~-~~~~~ 151 (323)
|.+++|+||+||||+|+... +..+++.+++++|.+. ...+....+.+........... .... ..+.|
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAED-ILRAFNAALAELGLPP--LDEEEIRQLIGLGLDELIERLLGEADEEAAAELVERLREEF 78 (220)
T ss_pred CCCCEEEEeCCCccccChHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhcCCHHHHHHHHhccccchhHHHHHHHHHHHH
Confidence 56889999999999999996 8999999999999983 4555555555443211111000 0110 11223
Q ss_pred HHHHhcC-CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccc
Q 020675 152 DEFLASK-DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 230 (323)
Q Consensus 152 ~~~i~~~-~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~ 230 (323)
.+..... ...++||+.++|+.|+++|++++|+|| .+...++..++.+|+..+|+.+ ++.++...
T Consensus 79 ~~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~---k~~~~~~~~l~~~gl~~~F~~i-~g~~~~~~----------- 143 (220)
T COG0546 79 LTAYAELLESRLFPGVKELLAALKSAGYKLGIVTN---KPERELDILLKALGLADYFDVI-VGGDDVPP----------- 143 (220)
T ss_pred HHHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeC---CcHHHHHHHHHHhCCccccceE-EcCCCCCC-----------
Confidence 2222222 256999999999999999999999999 6789999999999999999985 44333322
Q ss_pred cccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHH
Q 020675 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGA 310 (323)
Q Consensus 231 v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA 310 (323)
.||+|.. +..+++++|++|++++||||+.+|+++|
T Consensus 144 -------------------------------~KP~P~~--------------l~~~~~~~~~~~~~~l~VGDs~~Di~aA 178 (220)
T COG0546 144 -------------------------------PKPDPEP--------------LLLLLEKLGLDPEEALMVGDSLNDILAA 178 (220)
T ss_pred -------------------------------CCcCHHH--------------HHHHHHHhCCChhheEEECCCHHHHHHH
Confidence 3999999 8999999999988999999999999999
Q ss_pred HHcCCCEEEEcCC
Q 020675 311 QRIGMPCVVMRSR 323 (323)
Q Consensus 311 ~~aG~~~v~v~~g 323 (323)
++||+.+|+|.||
T Consensus 179 ~~Ag~~~v~v~~g 191 (220)
T COG0546 179 KAAGVPAVGVTWG 191 (220)
T ss_pred HHcCCCEEEEECC
Confidence 9999999999986
No 9
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.95 E-value=2.4e-26 Score=205.22 Aligned_cols=176 Identities=19% Similarity=0.182 Sum_probs=132.2
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHH-HHcccCCcHHHHH-----------HHHHh-HHHH
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTD-LLRKSAGDEDRML-----------VLFFN-RKNA 150 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~-----------~~~~~-~~~~ 150 (323)
+|+||||+||||+|+... +..+++++++++|.+. +...+.. +.+.......+.. ..... ..+.
T Consensus 1 ~k~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGL-VYRALRQAVTAAGLSP---TPEEVQSAWMGQSKIEAIRALLALDGADEAEAQAAFADFEER 76 (220)
T ss_pred CcEEEEecCCCeeccCch-HHHHHHHHHHHcCCCC---CHHHHHHhhcCCCHHHHHHHHHhccCCCHHHHHHHHHHHHHH
Confidence 479999999999999996 9999999999999873 3333322 3332211111100 00000 0122
Q ss_pred HHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC--ccccceeechhhhhhhhhcccccc
Q 020675 151 LDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEEVERSLYGQFVLG 228 (323)
Q Consensus 151 ~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~--~~fd~~v~s~~~~~~~~~~~~~~g 228 (323)
+.+.+.....+++||+.++|+.|+++|++++|+|| +....+..+++.+|+. .+|+.+ +++++...
T Consensus 77 ~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~---~~~~~~~~~l~~~~l~~~~~f~~i-~~~~~~~~--------- 143 (220)
T TIGR03351 77 LAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTG---FDRDTAERLLEKLGWTVGDDVDAV-VCPSDVAA--------- 143 (220)
T ss_pred HHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeC---CchHHHHHHHHHhhhhhhccCCEE-EcCCcCCC---------
Confidence 22222233467999999999999999999999999 6678899999999998 999974 55444322
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCC-CCcEEEEcCChhhH
Q 020675 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNCFLIAGSQSGV 307 (323)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~-p~~~v~VGDs~~Di 307 (323)
.||+|++ |..+++++|+. |++|+||||+..|+
T Consensus 144 ---------------------------------~KP~p~~--------------~~~a~~~~~~~~~~~~~~igD~~~Di 176 (220)
T TIGR03351 144 ---------------------------------GRPAPDL--------------ILRAMELTGVQDVQSVAVAGDTPNDL 176 (220)
T ss_pred ---------------------------------CCCCHHH--------------HHHHHHHcCCCChhHeEEeCCCHHHH
Confidence 3999999 99999999997 79999999999999
Q ss_pred HHHHHcCCCE-EEEcCC
Q 020675 308 AGAQRIGMPC-VVMRSR 323 (323)
Q Consensus 308 ~aA~~aG~~~-v~v~~g 323 (323)
++|+++||.+ |++.+|
T Consensus 177 ~aa~~aG~~~~i~~~~g 193 (220)
T TIGR03351 177 EAGINAGAGAVVGVLTG 193 (220)
T ss_pred HHHHHCCCCeEEEEecC
Confidence 9999999999 888764
No 10
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.95 E-value=3e-26 Score=211.06 Aligned_cols=178 Identities=19% Similarity=0.133 Sum_probs=129.9
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHH-----------------------
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDED----------------------- 138 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----------------------- 138 (323)
|++|+||||+||||+|+....+..+|+++++++|.+. +.+.+...++.......
T Consensus 2 ~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~---~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 78 (267)
T PRK13478 2 MKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEI---TLEEARGPMGLGKWDHIRALLKMPRVAARWQAVFGRLPTE 78 (267)
T ss_pred CceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCC---CHHHHHHhcCCCHHHHHHHHHhcHHHHHHHHHHhCCCCCH
Confidence 4579999999999999865324689999999999863 34433333332110000
Q ss_pred HHHHHHHh-HHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccc-cceeechhh
Q 020675 139 RMLVLFFN-RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS-KIKIVGNEE 216 (323)
Q Consensus 139 ~~~~~~~~-~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~f-d~~v~s~~~ 216 (323)
........ ....+.+.+ .....++||+.++|+.|+++|++++|+|| +....+..+++.+++..+| +. ++++++
T Consensus 79 ~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~elL~~L~~~g~~l~I~T~---~~~~~~~~~l~~~~l~~~~~d~-i~~~~~ 153 (267)
T PRK13478 79 ADVDALYAAFEPLQIAKL-ADYATPIPGVLEVIAALRARGIKIGSTTG---YTREMMDVVVPLAAAQGYRPDH-VVTTDD 153 (267)
T ss_pred HHHHHHHHHHHHHHHHHH-hhcCCCCCCHHHHHHHHHHCCCEEEEEcC---CcHHHHHHHHHHHhhcCCCceE-EEcCCc
Confidence 00000000 011222222 23467999999999999999999999999 5678888999999998875 54 455554
Q ss_pred hhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCC-CC
Q 020675 217 VERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VR 295 (323)
Q Consensus 217 ~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~-p~ 295 (323)
+.. .||+|++ |..+++++|+. |+
T Consensus 154 ~~~------------------------------------------~KP~p~~--------------~~~a~~~l~~~~~~ 177 (267)
T PRK13478 154 VPA------------------------------------------GRPYPWM--------------ALKNAIELGVYDVA 177 (267)
T ss_pred CCC------------------------------------------CCCChHH--------------HHHHHHHcCCCCCc
Confidence 432 3999999 99999999996 69
Q ss_pred cEEEEcCChhhHHHHHHcCCCEEEEcCC
Q 020675 296 NCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 296 ~~v~VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
+|+||||+.+|+++|+++||.+|+|.+|
T Consensus 178 e~l~IGDs~~Di~aA~~aG~~~i~v~~g 205 (267)
T PRK13478 178 ACVKVDDTVPGIEEGLNAGMWTVGVILS 205 (267)
T ss_pred ceEEEcCcHHHHHHHHHCCCEEEEEccC
Confidence 9999999999999999999999999875
No 11
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.94 E-value=2.6e-26 Score=205.56 Aligned_cols=178 Identities=17% Similarity=0.204 Sum_probs=133.4
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHH-----------HHHh-HH
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLV-----------LFFN-RK 148 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~-~~ 148 (323)
.+.+|+|+||+||||+|+... +..++.++++++|++. ..++.+...++.......+.+. .... ..
T Consensus 4 ~~~~k~iiFD~DGTL~d~~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (222)
T PRK10826 4 PRQILAAIFDMDGLLIDSEPL-WDRAELDVMASLGVDI--SRREELPDTLGLRIDQVVDLWYARQPWNGPSRQEVVQRII 80 (222)
T ss_pred cccCcEEEEcCCCCCCcCHHH-HHHHHHHHHHHCCCCC--CHHHHHHHhhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHH
Confidence 345899999999999999986 8999999999999863 2223333333321111000000 0000 01
Q ss_pred HHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccc
Q 020675 149 NALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLG 228 (323)
Q Consensus 149 ~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g 228 (323)
+.+.+.+. ....++||+.++|+.|+++|++++|+|| +....++..++.+|+..+|+.+ ++++++.
T Consensus 81 ~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~~~i~S~---~~~~~~~~~l~~~~l~~~f~~~-~~~~~~~---------- 145 (222)
T PRK10826 81 ARVISLIE-ETRPLLPGVREALALCKAQGLKIGLASA---SPLHMLEAVLTMFDLRDYFDAL-ASAEKLP---------- 145 (222)
T ss_pred HHHHHHHh-cCCCCCCCHHHHHHHHHHCCCeEEEEeC---CcHHHHHHHHHhCcchhcccEE-EEcccCC----------
Confidence 22222222 3467999999999999999999999999 5678899999999999999975 4444432
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHH
Q 020675 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 308 (323)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~ 308 (323)
..||+|++ |+.+++++|++|++|++|||+.+|++
T Consensus 146 --------------------------------~~Kp~~~~--------------~~~~~~~~~~~~~~~~~igDs~~Di~ 179 (222)
T PRK10826 146 --------------------------------YSKPHPEV--------------YLNCAAKLGVDPLTCVALEDSFNGMI 179 (222)
T ss_pred --------------------------------CCCCCHHH--------------HHHHHHHcCCCHHHeEEEcCChhhHH
Confidence 23999999 99999999999999999999999999
Q ss_pred HHHHcCCCEEEEcC
Q 020675 309 GAQRIGMPCVVMRS 322 (323)
Q Consensus 309 aA~~aG~~~v~v~~ 322 (323)
+|+++||++|++.+
T Consensus 180 aA~~aG~~~i~v~~ 193 (222)
T PRK10826 180 AAKAARMRSIVVPA 193 (222)
T ss_pred HHHHcCCEEEEecC
Confidence 99999999999975
No 12
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.94 E-value=3.6e-26 Score=202.64 Aligned_cols=173 Identities=23% Similarity=0.285 Sum_probs=131.5
Q ss_pred EEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHH-HHH------------HHHHhH-HHHHH
Q 020675 87 VLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDED-RML------------VLFFNR-KNALD 152 (323)
Q Consensus 87 ViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~------------~~~~~~-~~~~~ 152 (323)
||||+||||+|+... +..+++++++++|.+. ++.+.+...++....... .+. ...... .+.|.
T Consensus 1 viFD~DGTL~Ds~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (213)
T TIGR01449 1 VLFDLDGTLVDSAPD-IAAAVNMALAALGLPP--ATLARVIGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKLFDRHYE 77 (213)
T ss_pred CeecCCCccccCHHH-HHHHHHHHHHHCCCCC--CCHHHHHHHhcccHHHHHHHHhhccccccChHHHHHHHHHHHHHHH
Confidence 689999999999885 8899999999999863 455555544433211000 000 000100 12222
Q ss_pred HHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccc
Q 020675 153 EFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (323)
Q Consensus 153 ~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~ 232 (323)
+.. .....++||+.++|+.|+++|++++|+|| +....++.+++++|+..+|+.+ +++++...
T Consensus 78 ~~~-~~~~~~~~g~~~~L~~l~~~g~~~~i~S~---~~~~~~~~~l~~~~l~~~f~~~-~~~~~~~~------------- 139 (213)
T TIGR01449 78 EVA-GELTSVFPGVEATLGALRAKGLRLGLVTN---KPTPLARPLLELLGLAKYFSVL-IGGDSLAQ------------- 139 (213)
T ss_pred Hhc-cccCccCCCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCcHhhCcEE-EecCCCCC-------------
Confidence 221 22467999999999999999999999999 5678899999999999999874 55544322
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHH
Q 020675 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQR 312 (323)
Q Consensus 233 ~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~ 312 (323)
.||+|++ |..+++++|++|++|++|||+.+|+++|++
T Consensus 140 -----------------------------~Kp~p~~--------------~~~~~~~~~~~~~~~~~igDs~~d~~aa~~ 176 (213)
T TIGR01449 140 -----------------------------RKPHPDP--------------LLLAAERLGVAPQQMVYVGDSRVDIQAARA 176 (213)
T ss_pred -----------------------------CCCChHH--------------HHHHHHHcCCChhHeEEeCCCHHHHHHHHH
Confidence 3999999 999999999999999999999999999999
Q ss_pred cCCCEEEEcCC
Q 020675 313 IGMPCVVMRSR 323 (323)
Q Consensus 313 aG~~~v~v~~g 323 (323)
+||.+|+|.+|
T Consensus 177 aG~~~i~v~~g 187 (213)
T TIGR01449 177 AGCPSVLLTYG 187 (213)
T ss_pred CCCeEEEEccC
Confidence 99999999764
No 13
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.94 E-value=4.2e-26 Score=217.68 Aligned_cols=178 Identities=19% Similarity=0.225 Sum_probs=135.6
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHH----------HHHHhH-HHHH
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRML----------VLFFNR-KNAL 151 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-~~~~ 151 (323)
..++|||||||||+|+....+..+|.++++++|++. ...+.+..+.+.......... ...... .+.|
T Consensus 130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~--~~~e~~~~~~G~~~~~~l~~ll~~~~~~~~~e~l~~~~~~~y 207 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSP--PPAFILRRVEGMKNEQAISEVLCWSRDPAELRRMATRKEEIY 207 (381)
T ss_pred CCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCC--CHHHHHHHhcCCCHHHHHHHHhhccCCHHHHHHHHHHHHHHH
Confidence 678999999999999886326679999999999873 334344455553322111110 000000 2222
Q ss_pred HHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccccc
Q 020675 152 DEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGI 231 (323)
Q Consensus 152 ~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v 231 (323)
.+.. .....++||+.++|+.|+++|++++|+|| +....++.+++.+|+..||+.+ ++++++..
T Consensus 208 ~~~~-~~~~~l~pGa~ElL~~Lk~~GiklaIaSn---~~~~~~~~~L~~lgL~~yFd~I-v~sddv~~------------ 270 (381)
T PLN02575 208 QALQ-GGIYRLRTGSQEFVNVLMNYKIPMALVST---RPRKTLENAIGSIGIRGFFSVI-VAAEDVYR------------ 270 (381)
T ss_pred HHHh-ccCCCcCcCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCCHHHceEE-EecCcCCC------------
Confidence 2222 23467999999999999999999999999 5679999999999999999985 55554432
Q ss_pred ccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHH
Q 020675 232 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQ 311 (323)
Q Consensus 232 ~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~ 311 (323)
.||+|++ |..+++++|+.|++|+||||+..|+++|+
T Consensus 271 ------------------------------~KP~Pei--------------fl~A~~~lgl~Peecl~IGDS~~DIeAAk 306 (381)
T PLN02575 271 ------------------------------GKPDPEM--------------FIYAAQLLNFIPERCIVFGNSNQTVEAAH 306 (381)
T ss_pred ------------------------------CCCCHHH--------------HHHHHHHcCCCcccEEEEcCCHHHHHHHH
Confidence 3999999 99999999999999999999999999999
Q ss_pred HcCCCEEEEcCC
Q 020675 312 RIGMPCVVMRSR 323 (323)
Q Consensus 312 ~aG~~~v~v~~g 323 (323)
++||.+|+|.++
T Consensus 307 ~AGm~~IgV~~~ 318 (381)
T PLN02575 307 DARMKCVAVASK 318 (381)
T ss_pred HcCCEEEEECCC
Confidence 999999999763
No 14
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.94 E-value=9.7e-26 Score=195.42 Aligned_cols=171 Identities=26% Similarity=0.350 Sum_probs=127.6
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHH-HHH------------HHHh-HHH
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDR-MLV------------LFFN-RKN 149 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~------------~~~~-~~~ 149 (323)
+|+|+||+||||+|+... +..++..+++++|.+ ++.+....+.+........ ... .... ..+
T Consensus 1 ~~~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPL-HAQAWKHLADKYGIE---FDKQYNTSLGGLSREDILRAILKLRKPGLSLETIHQLAERKNE 76 (185)
T ss_pred CCeEEEcCCCcccCChHH-HHHHHHHHHHHcCCC---CCHHHHHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 479999999999999986 889999999999986 3333332232221111100 000 0000 122
Q ss_pred HHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccc
Q 020675 150 ALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGK 229 (323)
Q Consensus 150 ~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~ 229 (323)
.+.+.+......++||+.++|+.|+++|++++++|| + ..++.+++.+|+..+|+.+ +++++..
T Consensus 77 ~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~---~--~~~~~~l~~~~l~~~f~~v-~~~~~~~----------- 139 (185)
T TIGR02009 77 LYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSS---S--KNADRILAKLGLTDYFDAI-VDADEVK----------- 139 (185)
T ss_pred HHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeC---c--hhHHHHHHHcChHHHCCEe-eehhhCC-----------
Confidence 333333234478999999999999999999999999 4 5678899999999999975 4444332
Q ss_pred ccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHH
Q 020675 230 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAG 309 (323)
Q Consensus 230 ~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~a 309 (323)
..||+|++ |+.+++++|++|+++++|||+..|+++
T Consensus 140 -------------------------------~~kp~~~~--------------~~~~~~~~~~~~~~~v~IgD~~~di~a 174 (185)
T TIGR02009 140 -------------------------------EGKPHPET--------------FLLAAELLGVSPNECVVFEDALAGVQA 174 (185)
T ss_pred -------------------------------CCCCChHH--------------HHHHHHHcCCCHHHeEEEeCcHhhHHH
Confidence 23999999 999999999999999999999999999
Q ss_pred HHHcCCCEEEE
Q 020675 310 AQRIGMPCVVM 320 (323)
Q Consensus 310 A~~aG~~~v~v 320 (323)
|+++||++|.|
T Consensus 175 A~~~G~~~i~v 185 (185)
T TIGR02009 175 ARAAGMFAVAV 185 (185)
T ss_pred HHHCCCeEeeC
Confidence 99999999976
No 15
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.94 E-value=6.3e-26 Score=196.62 Aligned_cols=170 Identities=24% Similarity=0.337 Sum_probs=125.5
Q ss_pred EEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHH-------------HHHHh-HHHHH
Q 020675 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRML-------------VLFFN-RKNAL 151 (323)
Q Consensus 86 aViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~-~~~~~ 151 (323)
+||||+||||+|+... +..+++++++++|++ ++.+....+.+.......+.. ..... ..+.|
T Consensus 1 ~iiFD~DGTL~ds~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (185)
T TIGR01990 1 AVIFDLDGVITDTAEY-HYLAWKALADELGIP---FDEEFNESLKGVSREDSLERILDLGGKKYSEEEKEELAERKNDYY 76 (185)
T ss_pred CeEEcCCCccccChHH-HHHHHHHHHHHcCCC---CCHHHHHHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 5899999999999996 899999999999987 344443333332211111100 00000 11223
Q ss_pred HHHHhc-CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccc
Q 020675 152 DEFLAS-KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 230 (323)
Q Consensus 152 ~~~i~~-~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~ 230 (323)
.+.+.. ....++||+.++|+.|+++|++++|+||+ . .....++.+|+..+|+.+ +++++...
T Consensus 77 ~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~---~--~~~~~l~~~~l~~~f~~~-~~~~~~~~----------- 139 (185)
T TIGR01990 77 VELLKELTPADVLPGIKNLLDDLKKNNIKIALASAS---K--NAPTVLEKLGLIDYFDAI-VDPAEIKK----------- 139 (185)
T ss_pred HHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCC---c--cHHHHHHhcCcHhhCcEE-EehhhcCC-----------
Confidence 333221 23478999999999999999999999983 2 245789999999999975 44444322
Q ss_pred cccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHH
Q 020675 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGA 310 (323)
Q Consensus 231 v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA 310 (323)
.||+|++ |+.++++++++|++|++|||+.+|+++|
T Consensus 140 -------------------------------~kp~p~~--------------~~~~~~~~~~~~~~~v~vgD~~~di~aA 174 (185)
T TIGR01990 140 -------------------------------GKPDPEI--------------FLAAAEGLGVSPSECIGIEDAQAGIEAI 174 (185)
T ss_pred -------------------------------CCCChHH--------------HHHHHHHcCCCHHHeEEEecCHHHHHHH
Confidence 3999999 9999999999999999999999999999
Q ss_pred HHcCCCEEEEc
Q 020675 311 QRIGMPCVVMR 321 (323)
Q Consensus 311 ~~aG~~~v~v~ 321 (323)
+++||++|+|.
T Consensus 175 ~~aG~~~i~v~ 185 (185)
T TIGR01990 175 KAAGMFAVGVG 185 (185)
T ss_pred HHcCCEEEecC
Confidence 99999999874
No 16
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.94 E-value=6e-26 Score=200.68 Aligned_cols=174 Identities=24% Similarity=0.356 Sum_probs=130.6
Q ss_pred EEEecCCccccccccchHHHHHHHHHH-cCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhHHH-HHHHHH-hcCCCCCC
Q 020675 87 VLLEVDGVLVDAYRFGNRQAFNVAFQK-LGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKN-ALDEFL-ASKDAPLR 163 (323)
Q Consensus 87 ViFD~DGTLid~~~~~~~~a~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i-~~~~~~l~ 163 (323)
|||||||||+|+... +.+++++++.+ +|.+. ++.+.+....+.......+.........+ .+.+.. ....++++
T Consensus 1 iiFDlDGTL~Ds~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (205)
T TIGR01454 1 VVFDLDGVLVDSFAV-MREAFAIAYREVVGDGP--APFEEYRRHLGRYFPDIMRIMGLPLEMEEPFVRESYRLAGEVEVF 77 (205)
T ss_pred CeecCcCccccCHHH-HHHHHHHHHHHhcCCCC--CCHHHHHHHhCccHHHHHHHcCCCHHHHHHHHHHHHHhhcccccC
Confidence 689999999999996 99999999998 47652 45555555554332111110000000000 111111 12357899
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHH
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEA 243 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~ 243 (323)
||+.++|+.|+++|++++|+|| +....+...++.+|+..+|+.+ +++++..
T Consensus 78 ~g~~~~L~~L~~~g~~~~i~Sn---~~~~~~~~~l~~~~l~~~f~~i-~~~~~~~------------------------- 128 (205)
T TIGR01454 78 PGVPELLAELRADGVGTAIATG---KSGPRARSLLEALGLLPLFDHV-IGSDEVP------------------------- 128 (205)
T ss_pred CCHHHHHHHHHHCCCeEEEEeC---CchHHHHHHHHHcCChhheeeE-EecCcCC-------------------------
Confidence 9999999999999999999999 5678889999999999999974 4444332
Q ss_pred HHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcCC
Q 020675 244 RKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 244 ~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
..||+|++ |+.+++++|++|++|+||||+.+|+.+|+++||++|++.||
T Consensus 129 -----------------~~KP~~~~--------------~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g 177 (205)
T TIGR01454 129 -----------------RPKPAPDI--------------VREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWG 177 (205)
T ss_pred -----------------CCCCChHH--------------HHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEec
Confidence 23999999 99999999999999999999999999999999999999875
No 17
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.93 E-value=3.3e-25 Score=206.20 Aligned_cols=183 Identities=29% Similarity=0.496 Sum_probs=130.7
Q ss_pred CCCceEEEEecCCcccccc-ccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCC-----------------------c
Q 020675 81 PPRDLAVLLEVDGVLVDAY-RFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAG-----------------------D 136 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~-~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----------------------~ 136 (323)
...+++|||||||||+|+. .. +..+|+++++++|++...++.+.+..+.....+ .
T Consensus 37 ~~~~k~VIFDlDGTLvDS~~~~-~~~a~~~~l~~~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (286)
T PLN02779 37 SALPEALLFDCDGVLVETERDG-HRVAFNDAFKEFGLRPVEWDVELYDELLNIGGGKERMTWYFNENGWPTSTIEKAPKD 115 (286)
T ss_pred ccCCcEEEEeCceeEEccccHH-HHHHHHHHHHHcCCCCCCCCHHHHHHHHccCCChHHHHHHHHHcCCCccccccCCcc
Confidence 3457899999999999999 86 889999999999984213455443322211100 0
Q ss_pred H---HHHHHHHHh-HHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccc-ee
Q 020675 137 E---DRMLVLFFN-RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI-KI 211 (323)
Q Consensus 137 ~---~~~~~~~~~-~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~-~v 211 (323)
. .+....+.. ..+.|.+.+....++++||+.++|+.|+++|++++|+|| +....+..+++.++...+|+. .+
T Consensus 116 ~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn---~~~~~~~~~l~~~~~~~~~~~~~~ 192 (286)
T PLN02779 116 EEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCST---SNEKAVSKIVNTLLGPERAQGLDV 192 (286)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHhccccccCceEE
Confidence 0 001111111 123344444334468999999999999999999999999 566788888887754444442 12
Q ss_pred echhhhhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcC
Q 020675 212 VGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE 291 (323)
Q Consensus 212 ~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lg 291 (323)
++++++. ..||+|++ |..+++++|
T Consensus 193 v~~~~~~------------------------------------------~~KP~p~~--------------~~~a~~~~~ 216 (286)
T PLN02779 193 FAGDDVP------------------------------------------KKKPDPDI--------------YNLAAETLG 216 (286)
T ss_pred EeccccC------------------------------------------CCCCCHHH--------------HHHHHHHhC
Confidence 3433332 23999999 999999999
Q ss_pred CCCCcEEEEcCChhhHHHHHHcCCCEEEEcCC
Q 020675 292 KPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 292 v~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
++|++|+||||+.+|+++|+++||.+|+|.+|
T Consensus 217 ~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g 248 (286)
T PLN02779 217 VDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSS 248 (286)
T ss_pred cChHHEEEEeCCHHhHHHHHHcCCEEEEEccC
Confidence 99999999999999999999999999999775
No 18
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.93 E-value=1.1e-25 Score=201.27 Aligned_cols=176 Identities=16% Similarity=0.222 Sum_probs=130.1
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhH-------HHHHHHH
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-------KNALDEF 154 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 154 (323)
|.+|+|+||+||||+|+... +..+|.+++.++|++. ..++.+..+.+.........+...+.. ...+.+.
T Consensus 2 ~~~~~viFD~DGTL~d~~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (221)
T PRK10563 2 SQIEAVFFDCDGTLVDSEVI-CSRAYVTMFAEFGITL--SLEEVFKRFKGVKLYEIIDIISKEHGVTLAKAELEPVYRAE 78 (221)
T ss_pred CCCCEEEECCCCCCCCChHH-HHHHHHHHHHHcCCCC--CHHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 35889999999999999886 8899999999999863 223334443332211111111111110 1122211
Q ss_pred H---hcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccccc
Q 020675 155 L---ASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGI 231 (323)
Q Consensus 155 i---~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v 231 (323)
+ ......++||+.++|+.| +++++|+|| +....+...++++|+..+|+..+++++++..
T Consensus 79 ~~~~~~~~~~~~~gv~~~L~~L---~~~~~ivTn---~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~------------ 140 (221)
T PRK10563 79 VARLFDSELEPIAGANALLESI---TVPMCVVSN---GPVSKMQHSLGKTGMLHYFPDKLFSGYDIQR------------ 140 (221)
T ss_pred HHHHHHccCCcCCCHHHHHHHc---CCCEEEEeC---CcHHHHHHHHHhcChHHhCcceEeeHHhcCC------------
Confidence 1 123477999999999999 499999999 5668899999999999999754566654432
Q ss_pred ccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHH
Q 020675 232 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQ 311 (323)
Q Consensus 232 ~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~ 311 (323)
.||+|++ |+.+++++|++|++|+||||+..||++|+
T Consensus 141 ------------------------------~KP~p~~--------------~~~a~~~~~~~p~~~l~igDs~~di~aA~ 176 (221)
T PRK10563 141 ------------------------------WKPDPAL--------------MFHAAEAMNVNVENCILVDDSSAGAQSGI 176 (221)
T ss_pred ------------------------------CCCChHH--------------HHHHHHHcCCCHHHeEEEeCcHhhHHHHH
Confidence 3999999 99999999999999999999999999999
Q ss_pred HcCCCEEEEcC
Q 020675 312 RIGMPCVVMRS 322 (323)
Q Consensus 312 ~aG~~~v~v~~ 322 (323)
++||++|++.+
T Consensus 177 ~aG~~~i~~~~ 187 (221)
T PRK10563 177 AAGMEVFYFCA 187 (221)
T ss_pred HCCCEEEEECC
Confidence 99999998864
No 19
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.93 E-value=1.4e-25 Score=195.17 Aligned_cols=169 Identities=21% Similarity=0.311 Sum_probs=128.2
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHh--------------HH
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN--------------RK 148 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~ 148 (323)
++|+||||+||||+|+... +..+|+++++++|.+ ++........+... ......... ..
T Consensus 4 ~~~~viFD~DGTLiDs~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (188)
T PRK10725 4 RYAGLIFDMDGTILDTEPT-HRKAWREVLGRYGLQ---FDEQAMVALNGSPT---WRIAQAIIELNQADLDPHALAREKT 76 (188)
T ss_pred cceEEEEcCCCcCccCHHH-HHHHHHHHHHHcCCC---CCHHHHHHhcCCCH---HHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 4789999999999999986 999999999999986 33333333333221 111111110 01
Q ss_pred HHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccc
Q 020675 149 NALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLG 228 (323)
Q Consensus 149 ~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g 228 (323)
..+.+.. .....++|+ .++|+.|++. ++++|+|| +....+...++.+|+..+|+.+ +++++...
T Consensus 77 ~~~~~~~-~~~~~~~~~-~e~L~~L~~~-~~l~I~T~---~~~~~~~~~l~~~~l~~~fd~i-~~~~~~~~--------- 140 (188)
T PRK10725 77 EAVKSML-LDSVEPLPL-IEVVKAWHGR-RPMAVGTG---SESAIAEALLAHLGLRRYFDAV-VAADDVQH--------- 140 (188)
T ss_pred HHHHHHH-hccCCCccH-HHHHHHHHhC-CCEEEEcC---CchHHHHHHHHhCCcHhHceEE-EehhhccC---------
Confidence 1222222 234567886 5899999875 99999999 5678999999999999999974 55554432
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHH
Q 020675 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 308 (323)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~ 308 (323)
.||+|++ |+.+++++|++|++||+|||+..|++
T Consensus 141 ---------------------------------~KP~p~~--------------~~~~~~~~~~~~~~~l~igDs~~di~ 173 (188)
T PRK10725 141 ---------------------------------HKPAPDT--------------FLRCAQLMGVQPTQCVVFEDADFGIQ 173 (188)
T ss_pred ---------------------------------CCCChHH--------------HHHHHHHcCCCHHHeEEEeccHhhHH
Confidence 3999999 99999999999999999999999999
Q ss_pred HHHHcCCCEEEEc
Q 020675 309 GAQRIGMPCVVMR 321 (323)
Q Consensus 309 aA~~aG~~~v~v~ 321 (323)
+|+++||++|+|.
T Consensus 174 aA~~aG~~~i~~~ 186 (188)
T PRK10725 174 AARAAGMDAVDVR 186 (188)
T ss_pred HHHHCCCEEEeec
Confidence 9999999999986
No 20
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.93 E-value=4.2e-25 Score=204.04 Aligned_cols=176 Identities=16% Similarity=0.204 Sum_probs=132.2
Q ss_pred CCCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHH-------HHHHHhH-HHHH
Q 020675 80 NPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRM-------LVLFFNR-KNAL 151 (323)
Q Consensus 80 ~~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~ 151 (323)
.+..+|+|||||||||+|+... +..+++++++++|++. ++.+.+..+.+.......+. ....... .+.+
T Consensus 58 ~~~~~k~vIFDlDGTLiDS~~~-~~~a~~~~~~~~G~~~--~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 134 (273)
T PRK13225 58 YPQTLQAIIFDFDGTLVDSLPT-VVAIANAHAPDFGYDP--IDERDYAQLRQWSSRTIVRRAGLSPWQQARLLQRVQRQL 134 (273)
T ss_pred hhhhcCEEEECCcCccccCHHH-HHHHHHHHHHHCCCCC--CCHHHHHHHhCccHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 4456899999999999999986 8899999999999873 55555555544321111010 0011111 1122
Q ss_pred HHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccccc
Q 020675 152 DEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGI 231 (323)
Q Consensus 152 ~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v 231 (323)
.+. ...+.++||+.++|+.|+++|++++|+|| +....+..+++.+|+.++|+.+ ++.++.
T Consensus 135 ~~~--~~~~~l~pg~~e~L~~L~~~gi~laIvSn---~~~~~~~~~L~~~gl~~~F~~v-i~~~~~-------------- 194 (273)
T PRK13225 135 GDC--LPALQLFPGVADLLAQLRSRSLCLGILSS---NSRQNIEAFLQRQGLRSLFSVV-QAGTPI-------------- 194 (273)
T ss_pred Hhh--cccCCcCCCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCChhheEEE-EecCCC--------------
Confidence 221 23467899999999999999999999999 6679999999999999999974 443222
Q ss_pred ccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHH
Q 020675 232 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQ 311 (323)
Q Consensus 232 ~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~ 311 (323)
+|.|++ |..++++++++|++|+||||+..|+++|+
T Consensus 195 -------------------------------~~k~~~--------------~~~~l~~~~~~p~~~l~IGDs~~Di~aA~ 229 (273)
T PRK13225 195 -------------------------------LSKRRA--------------LSQLVAREGWQPAAVMYVGDETRDVEAAR 229 (273)
T ss_pred -------------------------------CCCHHH--------------HHHHHHHhCcChhHEEEECCCHHHHHHHH
Confidence 222344 88999999999999999999999999999
Q ss_pred HcCCCEEEEcCC
Q 020675 312 RIGMPCVVMRSR 323 (323)
Q Consensus 312 ~aG~~~v~v~~g 323 (323)
++||.+|+|.+|
T Consensus 230 ~AG~~~I~v~~g 241 (273)
T PRK13225 230 QVGLIAVAVTWG 241 (273)
T ss_pred HCCCeEEEEecC
Confidence 999999999875
No 21
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.93 E-value=5.2e-25 Score=196.39 Aligned_cols=175 Identities=19% Similarity=0.244 Sum_probs=125.0
Q ss_pred ceEEEEecCCccccccccchHHHHHHH---HHHcCCCCCCCCHH-HHHHHHc------ccCCc-HHHHHHHHHh------
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVA---FQKLGLDCANWTAP-IYTDLLR------KSAGD-EDRMLVLFFN------ 146 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~---~~~~g~~~~~~~~~-~~~~~~~------~~~~~-~~~~~~~~~~------ 146 (323)
+++|+||+||||+|+... +..++..+ +.++|++. +.+ .+..+.. ..... ..........
T Consensus 2 ~~~viFDlDGTL~ds~~~-~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGL-AEKARRNAIEVLIEAGLNV---DFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKL 77 (221)
T ss_pred ceEEEEeCCCCCcCCCCc-cCHHHHHHHHHHHHCCCcC---CHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHH
Confidence 689999999999999985 66776654 45667653 322 2221111 11111 1111111100
Q ss_pred ---HHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhc
Q 020675 147 ---RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYG 223 (323)
Q Consensus 147 ---~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~ 223 (323)
....+.+. ....+.++||+.++|+.|+++|++++|+|| +....+...++.+|+..+|+.++ ++++..
T Consensus 78 ~~~~~~~~~~~-~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn---~~~~~~~~~l~~~~l~~~f~~i~-~~~~~~----- 147 (221)
T TIGR02253 78 VAAFVYAYHKL-KFAYLRVYPGVRDTLMELRESGYRLGIITD---GLPVKQWEKLERLGVRDFFDAVI-TSEEEG----- 147 (221)
T ss_pred HHHHHHHHHHH-HHHhCCCCCCHHHHHHHHHHCCCEEEEEeC---CchHHHHHHHHhCChHHhccEEE-EeccCC-----
Confidence 01111111 122467999999999999999999999999 55678888999999999999754 444432
Q ss_pred ccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 020675 224 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 303 (323)
Q Consensus 224 ~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs 303 (323)
..||+|++ |+.+++++|++|++|+||||+
T Consensus 148 -------------------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~~igDs 176 (221)
T TIGR02253 148 -------------------------------------VEKPHPKI--------------FYAALKRLGVKPEEAVMVGDR 176 (221)
T ss_pred -------------------------------------CCCCCHHH--------------HHHHHHHcCCChhhEEEECCC
Confidence 23999999 999999999999999999999
Q ss_pred h-hhHHHHHHcCCCEEEEcCC
Q 020675 304 Q-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 304 ~-~Di~aA~~aG~~~v~v~~g 323 (323)
. +|+.+|+++||.+|++.++
T Consensus 177 ~~~di~~A~~aG~~~i~~~~~ 197 (221)
T TIGR02253 177 LDKDIKGAKNLGMKTVWINQG 197 (221)
T ss_pred hHHHHHHHHHCCCEEEEECCC
Confidence 8 8999999999999999764
No 22
>PLN02940 riboflavin kinase
Probab=99.93 E-value=2.2e-25 Score=215.12 Aligned_cols=176 Identities=21% Similarity=0.305 Sum_probs=134.8
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHh-----------HHHH
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN-----------RKNA 150 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~ 150 (323)
..+|+||||+||||+|+... +..+++++++++|.. |+.+.+....+.............+. ..+.
T Consensus 9 ~~ik~VIFDlDGTLvDt~~~-~~~a~~~~~~~~G~~---~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (382)
T PLN02940 9 KLVSHVILDLDGTLLNTDGI-VSDVLKAFLVKYGKQ---WDGREAQKIVGKTPLEAAATVVEDYGLPCSTDEFNSEITPL 84 (382)
T ss_pred ccCCEEEECCcCcCCcCHHH-HHHHHHHHHHHcCCC---CCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 34889999999999999996 999999999999986 55555555554332111111100000 0112
Q ss_pred HHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHH-HcCCCccccceeechhhhhhhhhccccccc
Q 020675 151 LDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVE-KLGSERISKIKIVGNEEVERSLYGQFVLGK 229 (323)
Q Consensus 151 ~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~-~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~ 229 (323)
+.+. .....++||+.++|+.|+++|++++|+|| +....+...++ .+|+.++|+.+ ++++++..
T Consensus 85 ~~~~--~~~~~l~pGv~elL~~Lk~~g~~l~IvTn---~~~~~~~~~l~~~~gl~~~Fd~i-i~~d~v~~---------- 148 (382)
T PLN02940 85 LSEQ--WCNIKALPGANRLIKHLKSHGVPMALASN---SPRANIEAKISCHQGWKESFSVI-VGGDEVEK---------- 148 (382)
T ss_pred HHHH--HccCCCCcCHHHHHHHHHHCCCcEEEEeC---CcHHHHHHHHHhccChHhhCCEE-EehhhcCC----------
Confidence 2221 12467899999999999999999999999 45677777887 78999999975 55555432
Q ss_pred ccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHH
Q 020675 230 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAG 309 (323)
Q Consensus 230 ~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~a 309 (323)
.||+|++ |..+++++|++|++|++|||+..|+++
T Consensus 149 --------------------------------~KP~p~~--------------~~~a~~~lgv~p~~~l~VGDs~~Di~a 182 (382)
T PLN02940 149 --------------------------------GKPSPDI--------------FLEAAKRLNVEPSNCLVIEDSLPGVMA 182 (382)
T ss_pred --------------------------------CCCCHHH--------------HHHHHHHcCCChhHEEEEeCCHHHHHH
Confidence 3999999 999999999999999999999999999
Q ss_pred HHHcCCCEEEEcCC
Q 020675 310 AQRIGMPCVVMRSR 323 (323)
Q Consensus 310 A~~aG~~~v~v~~g 323 (323)
|+++||.+|+|.++
T Consensus 183 A~~aGi~~I~v~~g 196 (382)
T PLN02940 183 GKAAGMEVIAVPSI 196 (382)
T ss_pred HHHcCCEEEEECCC
Confidence 99999999999864
No 23
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.93 E-value=1.1e-24 Score=201.26 Aligned_cols=177 Identities=19% Similarity=0.226 Sum_probs=132.5
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHH-HH----------HHHH-hHHHHH
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDR-ML----------VLFF-NRKNAL 151 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~----------~~~~-~~~~~~ 151 (323)
+|+|||||||||+|+... +..+++.+++++|.+. +..+.+....+........ .. .... ...+.+
T Consensus 13 ~k~viFDlDGTL~Ds~~~-~~~a~~~~~~~~g~~~--~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 89 (272)
T PRK13223 13 PRLVMFDLDGTLVDSVPD-LAAAVDRMLLELGRPP--AGLEAVRHWVGNGAPVLVRRALAGSIDHDGVDDELAEQALALF 89 (272)
T ss_pred CCEEEEcCCCccccCHHH-HHHHHHHHHHHcCCCC--CCHHHHHHHhChhHHHHHHHHhcccccccCCCHHHHHHHHHHH
Confidence 579999999999999996 9999999999999873 3444343443322110000 00 0000 001222
Q ss_pred HHHHhc--CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccc
Q 020675 152 DEFLAS--KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGK 229 (323)
Q Consensus 152 ~~~i~~--~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~ 229 (323)
.+.+.. ....++||+.++|+.|+++|++++|+|| ++...+..+++.+++..+|+.+ +++++...
T Consensus 90 ~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn---~~~~~~~~~l~~~~i~~~f~~i-~~~d~~~~---------- 155 (272)
T PRK13223 90 MEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITN---KPERFVAPLLDQMKIGRYFRWI-IGGDTLPQ---------- 155 (272)
T ss_pred HHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEEC---CcHHHHHHHHHHcCcHhhCeEE-EecCCCCC----------
Confidence 222221 2356899999999999999999999999 5677888999999999999864 55544322
Q ss_pred ccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHH
Q 020675 230 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAG 309 (323)
Q Consensus 230 ~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~a 309 (323)
.||+|++ |+.+++++|++|++|++|||+.+|+++
T Consensus 156 --------------------------------~Kp~p~~--------------~~~~~~~~g~~~~~~l~IGD~~~Di~a 189 (272)
T PRK13223 156 --------------------------------KKPDPAA--------------LLFVMKMAGVPPSQSLFVGDSRSDVLA 189 (272)
T ss_pred --------------------------------CCCCcHH--------------HHHHHHHhCCChhHEEEECCCHHHHHH
Confidence 3999999 999999999999999999999999999
Q ss_pred HHHcCCCEEEEcCC
Q 020675 310 AQRIGMPCVVMRSR 323 (323)
Q Consensus 310 A~~aG~~~v~v~~g 323 (323)
|+++||.+++|.+|
T Consensus 190 A~~aGi~~i~v~~G 203 (272)
T PRK13223 190 AKAAGVQCVALSYG 203 (272)
T ss_pred HHHCCCeEEEEecC
Confidence 99999999999774
No 24
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.92 E-value=1.3e-24 Score=191.57 Aligned_cols=170 Identities=17% Similarity=0.200 Sum_probs=121.9
Q ss_pred eEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHH-H---HH----------ccc-CCcHHHH----HHHHH
Q 020675 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYT-D---LL----------RKS-AGDEDRM----LVLFF 145 (323)
Q Consensus 85 kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~-~---~~----------~~~-~~~~~~~----~~~~~ 145 (323)
|+|+||+||||+|+... +..+++++++++|++. ..+.+. . .. +.. +....++ ....+
T Consensus 1 k~viFDlDGTL~d~~~~-~~~a~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 76 (203)
T TIGR02252 1 KLITFDAVGTLLALKEP-VGEVYCEIARKYGVEV---SPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTF 76 (203)
T ss_pred CeEEEecCCceeeeCCC-HHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 58999999999999885 8899999999999973 322111 1 11 000 1111111 11111
Q ss_pred hH------------HHHHHHHHh-cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceee
Q 020675 146 NR------------KNALDEFLA-SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIV 212 (323)
Q Consensus 146 ~~------------~~~~~~~i~-~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~ 212 (323)
.. .+.+.+.+. .....++||+.++|+.|+++|++++|+||. .. .....++.+|+..+|+.++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~---~~-~~~~~l~~~~l~~~fd~i~- 151 (203)
T TIGR02252 77 GRAGVPDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNF---DS-RLRGLLEALGLLEYFDFVV- 151 (203)
T ss_pred HhcCCCCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCC---ch-hHHHHHHHCCcHHhcceEE-
Confidence 10 111112111 223578999999999999999999999994 33 3577889999999999754
Q ss_pred chhhhhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCC
Q 020675 213 GNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK 292 (323)
Q Consensus 213 s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv 292 (323)
++++.. ..||+|++ |+.+++++|+
T Consensus 152 ~s~~~~------------------------------------------~~KP~~~~--------------~~~~~~~~~~ 175 (203)
T TIGR02252 152 TSYEVG------------------------------------------AEKPDPKI--------------FQEALERAGI 175 (203)
T ss_pred eecccC------------------------------------------CCCCCHHH--------------HHHHHHHcCC
Confidence 433332 24999999 9999999999
Q ss_pred CCCcEEEEcCCh-hhHHHHHHcCCCEEE
Q 020675 293 PVRNCFLIAGSQ-SGVAGAQRIGMPCVV 319 (323)
Q Consensus 293 ~p~~~v~VGDs~-~Di~aA~~aG~~~v~ 319 (323)
+|++|++|||+. +||++|+++||++|+
T Consensus 176 ~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 176 SPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred ChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 999999999997 899999999999885
No 25
>PRK09449 dUMP phosphatase; Provisional
Probab=99.92 E-value=2.7e-24 Score=192.44 Aligned_cols=173 Identities=16% Similarity=0.215 Sum_probs=124.4
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHH--Hccc--------CCcHHHHHHH----HHh-
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDL--LRKS--------AGDEDRMLVL----FFN- 146 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~--~~~~--------~~~~~~~~~~----~~~- 146 (323)
|++|+|+||+||||+|.. ...+++++++++|++. +.+.+..+ .+.. .......... ...
T Consensus 1 m~~k~iiFDlDGTLid~~---~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (224)
T PRK09449 1 MKYDWILFDADETLFHFD---AFAGLQRMFSRYGVDF---TAEDFQDYQAVNKPLWVDYQNGAITALQLQHTRFESWAEK 74 (224)
T ss_pred CCccEEEEcCCCchhcch---hhHHHHHHHHHhCCCC---cHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 568999999999999854 3478899999999863 34333322 1110 0001111100 000
Q ss_pred -------HHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhh
Q 020675 147 -------RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 219 (323)
Q Consensus 147 -------~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~ 219 (323)
..+.+.+.+. ....++||+.++|+.|+ +|++++|+|| +....++..++.+|+..+|+.++ ++++..
T Consensus 75 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~L~~L~-~~~~~~i~Tn---~~~~~~~~~l~~~~l~~~fd~v~-~~~~~~- 147 (224)
T PRK09449 75 LNVTPGELNSAFLNAMA-EICTPLPGAVELLNALR-GKVKMGIITN---GFTELQQVRLERTGLRDYFDLLV-ISEQVG- 147 (224)
T ss_pred cCCCHHHHHHHHHHHHh-hcCccCccHHHHHHHHH-hCCeEEEEeC---CcHHHHHHHHHhCChHHHcCEEE-EECccC-
Confidence 0122222222 23679999999999999 6899999999 56788888999999999999864 444432
Q ss_pred hhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCC-CcEE
Q 020675 220 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV-RNCF 298 (323)
Q Consensus 220 ~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p-~~~v 298 (323)
..||+|++ |+.+++++|+.+ ++|+
T Consensus 148 -----------------------------------------~~KP~p~~--------------~~~~~~~~~~~~~~~~~ 172 (224)
T PRK09449 148 -----------------------------------------VAKPDVAI--------------FDYALEQMGNPDRSRVL 172 (224)
T ss_pred -----------------------------------------CCCCCHHH--------------HHHHHHHcCCCCcccEE
Confidence 23999999 999999999854 8999
Q ss_pred EEcCCh-hhHHHHHHcCCCEEEEcC
Q 020675 299 LIAGSQ-SGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 299 ~VGDs~-~Di~aA~~aG~~~v~v~~ 322 (323)
||||+. +|+++|+++||.+|++.+
T Consensus 173 ~vgD~~~~Di~~A~~aG~~~i~~~~ 197 (224)
T PRK09449 173 MVGDNLHSDILGGINAGIDTCWLNA 197 (224)
T ss_pred EEcCCcHHHHHHHHHCCCcEEEECC
Confidence 999998 699999999999999864
No 26
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.92 E-value=9.8e-25 Score=196.15 Aligned_cols=176 Identities=15% Similarity=0.109 Sum_probs=120.7
Q ss_pred CCceEEEEecCCccccccc--cchHHHHHHHH-HHcCCCCCCCCHHHHHHHHccc---CCc----HHHHHHHHHhH-HHH
Q 020675 82 PRDLAVLLEVDGVLVDAYR--FGNRQAFNVAF-QKLGLDCANWTAPIYTDLLRKS---AGD----EDRMLVLFFNR-KNA 150 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~--~~~~~a~~~~~-~~~g~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~-~~~ 150 (323)
.++|+|||||||||+|+.. ..+...+.+.+ +.+|.+. ++....+.+.. ... ..+.+...... ...
T Consensus 8 ~~~k~vIFDlDGTL~d~~~~~~~~~~~~~~~~~~~~G~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (224)
T PRK14988 8 QDVDTVLLDMDGTLLDLAFDNYFWQKLVPETLGAQRGISP----QEAQEYIRQEYHAVQHTLNWYCLDYWSERLGLDICA 83 (224)
T ss_pred ccCCEEEEcCCCCccchhhhchHHHhhHHHHHHHHhCcCH----HHHHHHHHHHHHHHcCccceecHHHHHHHhCCCHHH
Confidence 4578999999999999641 11333333333 5677752 33332221100 000 01111111100 011
Q ss_pred HHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccc
Q 020675 151 LDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 230 (323)
Q Consensus 151 ~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~ 230 (323)
+... ......++||+.++|+.|+++|++++|+|| +....++..++.+|+.++|+.++ ++++...
T Consensus 84 ~~~~-~~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn---~~~~~~~~~l~~~~l~~~fd~iv-~s~~~~~----------- 147 (224)
T PRK14988 84 MTTE-QGPRAVLREDTVPFLEALKASGKRRILLTN---AHPHNLAVKLEHTGLDAHLDLLL-STHTFGY----------- 147 (224)
T ss_pred HHHH-HhccCCcCCCHHHHHHHHHhCCCeEEEEeC---cCHHHHHHHHHHCCcHHHCCEEE-EeeeCCC-----------
Confidence 1111 123477999999999999999999999999 56788888999999999999754 4444322
Q ss_pred cccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHH
Q 020675 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGA 310 (323)
Q Consensus 231 v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA 310 (323)
.||+|++ |+.+++++|++|++|+||||+..|+++|
T Consensus 148 -------------------------------~KP~p~~--------------~~~~~~~~~~~p~~~l~igDs~~di~aA 182 (224)
T PRK14988 148 -------------------------------PKEDQRL--------------WQAVAEHTGLKAERTLFIDDSEPILDAA 182 (224)
T ss_pred -------------------------------CCCCHHH--------------HHHHHHHcCCChHHEEEEcCCHHHHHHH
Confidence 3999999 9999999999999999999999999999
Q ss_pred HHcCCCE-EEEcC
Q 020675 311 QRIGMPC-VVMRS 322 (323)
Q Consensus 311 ~~aG~~~-v~v~~ 322 (323)
+++||++ ++|.+
T Consensus 183 ~~aG~~~~~~v~~ 195 (224)
T PRK14988 183 AQFGIRYCLGVTN 195 (224)
T ss_pred HHcCCeEEEEEeC
Confidence 9999984 66764
No 27
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.92 E-value=2.7e-24 Score=192.12 Aligned_cols=177 Identities=21% Similarity=0.246 Sum_probs=134.4
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHh-------------H
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN-------------R 147 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~ 147 (323)
.+.+++|+||+||||+|+... +..++..+++++|.+. ++.+.+....+... ..++...+. .
T Consensus 3 ~~~~~~iiFD~DGTL~d~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~ 76 (226)
T PRK13222 3 FMDIRAVAFDLDGTLVDSAPD-LAAAVNAALAALGLPP--AGEERVRTWVGNGA---DVLVERALTWAGREPDEELLEKL 76 (226)
T ss_pred CCcCcEEEEcCCcccccCHHH-HHHHHHHHHHHCCCCC--CCHHHHHHHhCccH---HHHHHHHHhhccCCccHHHHHHH
Confidence 467889999999999999875 8899999999999873 44444444443221 111111110 0
Q ss_pred HHHHHHHHh---cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcc
Q 020675 148 KNALDEFLA---SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQ 224 (323)
Q Consensus 148 ~~~~~~~i~---~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~ 224 (323)
...+.+.+. .....++||+.++|+.|+++|++++++|| +....++.+++.+|+..+|+.+ ++.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~---~~~~~~~~~l~~~~l~~~f~~~-~~~~~~~------ 146 (226)
T PRK13222 77 RELFDRHYAENVAGGSRLYPGVKETLAALKAAGYPLAVVTN---KPTPFVAPLLEALGIADYFSVV-IGGDSLP------ 146 (226)
T ss_pred HHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCCccCccEE-EcCCCCC------
Confidence 111222111 12467999999999999999999999999 5678888999999999999864 4444332
Q ss_pred cccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh
Q 020675 225 FVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ 304 (323)
Q Consensus 225 ~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~ 304 (323)
..||+|++ |+.++++++++|++|++|||+.
T Consensus 147 ------------------------------------~~kp~~~~--------------~~~~~~~~~~~~~~~i~igD~~ 176 (226)
T PRK13222 147 ------------------------------------NKKPDPAP--------------LLLACEKLGLDPEEMLFVGDSR 176 (226)
T ss_pred ------------------------------------CCCcChHH--------------HHHHHHHcCCChhheEEECCCH
Confidence 23999999 9999999999999999999999
Q ss_pred hhHHHHHHcCCCEEEEcCC
Q 020675 305 SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 305 ~Di~aA~~aG~~~v~v~~g 323 (323)
+|+++|+++|+.+|+|.+|
T Consensus 177 ~Di~~a~~~g~~~i~v~~g 195 (226)
T PRK13222 177 NDIQAARAAGCPSVGVTYG 195 (226)
T ss_pred HHHHHHHHCCCcEEEECcC
Confidence 9999999999999999865
No 28
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.92 E-value=8.4e-25 Score=192.23 Aligned_cols=104 Identities=16% Similarity=0.265 Sum_probs=93.4
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
..+++||+.++|+.|+++|++++|+|| +....++..++.+|+..+|+.+ ++++++..
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn---~~~~~~~~~l~~~gl~~~fd~i-~~s~~~~~------------------- 146 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSN---GSPAMLKSLVKHAGLDDPFDAV-LSADAVRA------------------- 146 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHCCChhhhhee-EehhhcCC-------------------
Confidence 467999999999999999999999999 5678899999999999999975 55544422
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
.||+|++ |+.+++++|++|++|++|||+..|+.+|+++||++|
T Consensus 147 -----------------------~KP~~~~--------------~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i 189 (198)
T TIGR01428 147 -----------------------YKPAPQV--------------YQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTA 189 (198)
T ss_pred -----------------------CCCCHHH--------------HHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEE
Confidence 3999999 999999999999999999999999999999999999
Q ss_pred EEcC
Q 020675 319 VMRS 322 (323)
Q Consensus 319 ~v~~ 322 (323)
+|..
T Consensus 190 ~v~r 193 (198)
T TIGR01428 190 WVNR 193 (198)
T ss_pred EecC
Confidence 9875
No 29
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.92 E-value=5.2e-24 Score=189.91 Aligned_cols=174 Identities=16% Similarity=0.239 Sum_probs=128.1
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHc----------ccCCcHHHH----HHHHHh---
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLR----------KSAGDEDRM----LVLFFN--- 146 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~----------~~~~~~~~~----~~~~~~--- 146 (323)
+|+|+||+||||+|+... +..++.++++++|++. +...+..+.. ......... +.....
T Consensus 1 ~k~viFD~DGTL~d~~~~-~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAA-EALALRLLFEDQGIPL---TEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEYN 76 (224)
T ss_pred CCEEEEcCcCcccccchH-HHHHHHHHHHHhCCCc---cHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHhC
Confidence 479999999999999986 7889999999999863 2222211111 000111111 001110
Q ss_pred -------HHHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhh
Q 020675 147 -------RKNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 219 (323)
Q Consensus 147 -------~~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~ 219 (323)
....+.+.. .....++||+.++|+.|+++ ++++|+|| +....+...++.+|+..+|+.++ ++++..
T Consensus 77 ~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn---~~~~~~~~~l~~~~l~~~fd~i~-~~~~~~- 149 (224)
T TIGR02254 77 TEADEALLNQKYLRFL-EEGHQLLPGAFELMENLQQK-FRLYIVTN---GVRETQYKRLRKSGLFPFFDDIF-VSEDAG- 149 (224)
T ss_pred CCCcHHHHHHHHHHHH-hccCeeCccHHHHHHHHHhc-CcEEEEeC---CchHHHHHHHHHCCcHhhcCEEE-EcCccC-
Confidence 012223322 22367999999999999999 99999999 56788899999999999999754 443332
Q ss_pred hhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHc-CCCCCcEE
Q 020675 220 SLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA-EKPVRNCF 298 (323)
Q Consensus 220 ~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~l-gv~p~~~v 298 (323)
..||+|++ |+.+++++ |++|++|+
T Consensus 150 -----------------------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~v 174 (224)
T TIGR02254 150 -----------------------------------------IQKPDKEI--------------FNYALERMPKFSKEEVL 174 (224)
T ss_pred -----------------------------------------CCCCCHHH--------------HHHHHHHhcCCCchheE
Confidence 24999999 99999999 99999999
Q ss_pred EEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 299 LIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 299 ~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
||||+. +|+++|+++||++|++.++
T Consensus 175 ~igD~~~~di~~A~~~G~~~i~~~~~ 200 (224)
T TIGR02254 175 MIGDSLTADIKGGQNAGLDTCWMNPD 200 (224)
T ss_pred EECCCcHHHHHHHHHCCCcEEEECCC
Confidence 999998 7999999999999998753
No 30
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.91 E-value=1.1e-24 Score=185.04 Aligned_cols=167 Identities=23% Similarity=0.373 Sum_probs=127.4
Q ss_pred EEEecCCccccccccchHHHHHH-HHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHh--------HHHHHHHHHhc
Q 020675 87 VLLEVDGVLVDAYRFGNRQAFNV-AFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN--------RKNALDEFLAS 157 (323)
Q Consensus 87 ViFD~DGTLid~~~~~~~~a~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~i~~ 157 (323)
|+||+||||+|+... +.+++.. +++++|.+ ++.+.+....+.. ....+...+. ..+.+.+....
T Consensus 1 iifD~dgtL~d~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPA-IFRALQRLALEEFGLE---ISAEELRELFGKS---YEEALERLLERFGIDPEEIQELFREYNLE 73 (176)
T ss_dssp EEEESBTTTEEHHHH-HHHHHHHHHHHHTTHH---HHHHHHHHHTTSH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEECCCCcEeCHHH-HHHHHHHHHHHHhCCC---CCHHHHHHHhCCC---HHHHHHHhhhccchhHHHHHHHhhhhhhh
Confidence 799999999999884 7788887 47778775 3334444433221 2222222111 12333443223
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcch
Q 020675 158 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 158 ~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~ 237 (323)
...+++||+.++|+.|+++|++++++|| +....++..++.+|+.++|+.++ ++++..
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn---~~~~~~~~~l~~~~~~~~f~~i~-~~~~~~------------------- 130 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSN---GSRERIERVLERLGLDDYFDEII-SSDDVG------------------- 130 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEES---SEHHHHHHHHHHTTHGGGCSEEE-EGGGSS-------------------
T ss_pred hccchhhhhhhhhhhcccccceeEEeec---CCccccccccccccccccccccc-ccchhh-------------------
Confidence 4578999999999999999999999999 66788999999999999999754 444432
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
..||+|++ |+.+++++|++|++|+||||+..|+++|+++||.+
T Consensus 131 -----------------------~~Kp~~~~--------------~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 131 -----------------------SRKPDPDA--------------YRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp -----------------------SSTTSHHH--------------HHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred -----------------------hhhhHHHH--------------HHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 23999999 99999999999999999999999999999999999
Q ss_pred EEE
Q 020675 318 VVM 320 (323)
Q Consensus 318 v~v 320 (323)
|+|
T Consensus 174 i~v 176 (176)
T PF13419_consen 174 IWV 176 (176)
T ss_dssp EEE
T ss_pred EeC
Confidence 986
No 31
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.91 E-value=1.4e-23 Score=207.40 Aligned_cols=175 Identities=11% Similarity=0.160 Sum_probs=129.4
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCC--CCC-CCHHHHHHHHcccCCcHHHHHHHHHh---------H--
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD--CAN-WTAPIYTDLLRKSAGDEDRMLVLFFN---------R-- 147 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-- 147 (323)
+.+++|||||||||+|+... +.++|++++++++.. +.. .+.+.+...++..... .+..... .
T Consensus 239 ~m~k~vIFDlDGTLiDs~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~---~~~~l~~~~~~~~~~~~~~ 314 (459)
T PRK06698 239 EMLQALIFDMDGTLFQTDKI-LELSLDDTFDHLRSLQLWDTVTPIDKYREIMGVPLPK---VWEALLPDHSLEIREQTDA 314 (459)
T ss_pred HhhhheeEccCCceecchhH-HHHHHHHHHHHHhhhcccCCCCCHHHHHHHcCCChHH---HHHHHhhhcchhHHHHHHH
Confidence 34689999999999999996 999999999998521 001 1334555555543221 1111110 0
Q ss_pred --HHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccc
Q 020675 148 --KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQF 225 (323)
Q Consensus 148 --~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~ 225 (323)
.+.+.+.+.....+++||+.++|+.|+++|++++|+|| +....+...++.+|+.++|+.+ ++++++..
T Consensus 315 ~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~---~~~~~~~~~l~~~~l~~~f~~i-~~~d~v~~------ 384 (459)
T PRK06698 315 YFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASN---GLTEYLRAIVSYYDLDQWVTET-FSIEQINS------ 384 (459)
T ss_pred HHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeC---CchHHHHHHHHHCCcHhhccee-EecCCCCC------
Confidence 11222222234568999999999999999999999999 6679999999999999999985 55544421
Q ss_pred ccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChh
Q 020675 226 VLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS 305 (323)
Q Consensus 226 ~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~ 305 (323)
||+|++ |..++++++ |++|++|||+.+
T Consensus 385 -------------------------------------~~kP~~--------------~~~al~~l~--~~~~v~VGDs~~ 411 (459)
T PRK06698 385 -------------------------------------LNKSDL--------------VKSILNKYD--IKEAAVVGDRLS 411 (459)
T ss_pred -------------------------------------CCCcHH--------------HHHHHHhcC--cceEEEEeCCHH
Confidence 677777 888998875 789999999999
Q ss_pred hHHHHHHcCCCEEEEcCC
Q 020675 306 GVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 306 Di~aA~~aG~~~v~v~~g 323 (323)
|+.+|+++||.+|++.++
T Consensus 412 Di~aAk~AG~~~I~v~~~ 429 (459)
T PRK06698 412 DINAAKDNGLIAIGCNFD 429 (459)
T ss_pred HHHHHHHCCCeEEEEeCC
Confidence 999999999999999764
No 32
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.90 E-value=2.4e-23 Score=180.95 Aligned_cols=173 Identities=14% Similarity=0.133 Sum_probs=118.4
Q ss_pred EEEEecCCccccccccchHHHHHHHHH-----HcCCCCCCCCHHHHH-HHHcccCCcHHHHHHHHHhHHHHHHHHHhc--
Q 020675 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQ-----KLGLDCANWTAPIYT-DLLRKSAGDEDRMLVLFFNRKNALDEFLAS-- 157 (323)
Q Consensus 86 aViFD~DGTLid~~~~~~~~a~~~~~~-----~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-- 157 (323)
+||||+||||+|+... +..++++++. ++|++. .+...+. ..+...+.....+....-...+.+.+.+..
T Consensus 2 ~viFDlDGTL~ds~~~-~~~~~~~~~~~~~~~~~g~~~--~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (184)
T TIGR01993 2 VWFFDLDNTLYPHSAG-IFLQIDRNITEFVAARLKLSE--EEARVLRKDYYREYGTTLAGLMILHEIDADEYLRYVHGRL 78 (184)
T ss_pred eEEEeCCCCCCCCccc-HHHHHHHHHHHHHHHHcCcCH--HHHHHHHHHHHHHHchHHHHHHHhhCCCHHHHHHHHhccC
Confidence 7999999999999875 7788887654 567652 1111111 111111111111111100001122222221
Q ss_pred --CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCc
Q 020675 158 --KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 158 --~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
..++++||+.++|+.|+ ++++|+|| +....+...++.+|+..+|+.+ +++++.....
T Consensus 79 ~~~~~~~~~g~~~~L~~L~---~~~~i~Tn---~~~~~~~~~l~~~gl~~~fd~i-~~~~~~~~~~-------------- 137 (184)
T TIGR01993 79 PYEKLKPDPELRNLLLRLP---GRKIIFTN---GDRAHARRALNRLGIEDCFDGI-FCFDTANPDY-------------- 137 (184)
T ss_pred CHHhCCCCHHHHHHHHhCC---CCEEEEeC---CCHHHHHHHHHHcCcHhhhCeE-EEeecccCcc--------------
Confidence 24668999999999997 58999999 5678899999999999999975 4444332100
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
...||+|++ |+.+++++|++|++|+||||+..|+++|+++||
T Consensus 138 ------------------------~~~KP~p~~--------------~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~ 179 (184)
T TIGR01993 138 ------------------------LLPKPSPQA--------------YEKALREAGVDPERAIFFDDSARNIAAAKALGM 179 (184)
T ss_pred ------------------------CCCCCCHHH--------------HHHHHHHhCCCccceEEEeCCHHHHHHHHHcCC
Confidence 013999999 999999999999999999999999999999999
Q ss_pred CEEEE
Q 020675 316 PCVVM 320 (323)
Q Consensus 316 ~~v~v 320 (323)
++|+|
T Consensus 180 ~~i~v 184 (184)
T TIGR01993 180 KTVLV 184 (184)
T ss_pred EEeeC
Confidence 99986
No 33
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.90 E-value=6.9e-23 Score=219.14 Aligned_cols=179 Identities=21% Similarity=0.280 Sum_probs=135.6
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHH-----------H-hHH
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF-----------F-NRK 148 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~-~~~ 148 (323)
-+++|+|||||||||+|+... +.++|+++++++|++ ++.+.+..+.+............. . ...
T Consensus 72 ~~~ikaVIFDlDGTLiDS~~~-~~~a~~~~~~~~G~~---it~e~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 147 (1057)
T PLN02919 72 WGKVSAVLFDMDGVLCNSEEP-SRRAAVDVFAEMGVE---VTVEDFVPFMGTGEANFLGGVASVKGVKGFDPDAAKKRFF 147 (1057)
T ss_pred CCCCCEEEECCCCCeEeChHH-HHHHHHHHHHHcCCC---CCHHHHHHHhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHH
Confidence 467899999999999999996 899999999999986 455555555443211111000000 0 001
Q ss_pred HHHHHHHh-cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC-ccccceeechhhhhhhhhcccc
Q 020675 149 NALDEFLA-SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKIVGNEEVERSLYGQFV 226 (323)
Q Consensus 149 ~~~~~~i~-~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~-~~fd~~v~s~~~~~~~~~~~~~ 226 (323)
+.+.+.+. .....++||+.++|+.|+++|++++|+|| .....++..++.+|+. .+|+.+ ++++++..
T Consensus 148 ~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn---~~~~~~~~~L~~~gl~~~~Fd~i-v~~~~~~~------- 216 (1057)
T PLN02919 148 EIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASS---ADRIKVDANLAAAGLPLSMFDAI-VSADAFEN------- 216 (1057)
T ss_pred HHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeC---CcHHHHHHHHHHcCCChhHCCEE-EECccccc-------
Confidence 12222211 12234799999999999999999999999 5678889999999996 789875 45544432
Q ss_pred cccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhh
Q 020675 227 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG 306 (323)
Q Consensus 227 ~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~D 306 (323)
.||+|++ |+.+++++|++|++|++|||+..|
T Consensus 217 -----------------------------------~KP~Pe~--------------~~~a~~~lgv~p~e~v~IgDs~~D 247 (1057)
T PLN02919 217 -----------------------------------LKPAPDI--------------FLAAAKILGVPTSECVVIEDALAG 247 (1057)
T ss_pred -----------------------------------CCCCHHH--------------HHHHHHHcCcCcccEEEEcCCHHH
Confidence 3999999 999999999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCC
Q 020675 307 VAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 307 i~aA~~aG~~~v~v~~g 323 (323)
+++|+++||++|+|.++
T Consensus 248 i~AA~~aGm~~I~v~~~ 264 (1057)
T PLN02919 248 VQAARAAGMRCIAVTTT 264 (1057)
T ss_pred HHHHHHcCCEEEEECCC
Confidence 99999999999999864
No 34
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.90 E-value=2.3e-23 Score=184.87 Aligned_cols=175 Identities=14% Similarity=0.129 Sum_probs=114.9
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCC-----------cHHHHHHHHHhH-----
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAG-----------DEDRMLVLFFNR----- 147 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~----- 147 (323)
+|+|||||||||+|+.. ...+|...+...|++ ..+....+.+.... ....+...+...
T Consensus 2 ik~viFDldGtL~d~~~--~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 75 (211)
T TIGR02247 2 IKAVIFDFGGVLLPSPG--VMRRWETERGLPGLK----DFIVTVNITGPDFNPWARTFERGELTAEAFDGLFRHEYGLRL 75 (211)
T ss_pred ceEEEEecCCceecCHH--HHHHHHHHcCCCCCc----cHHHHHHhcCCCCChHHHHHHcCCCCHHHHHHHHHHHhcccc
Confidence 57999999999999854 445666554444443 12222222221111 111111111100
Q ss_pred -----HHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhh
Q 020675 148 -----KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLY 222 (323)
Q Consensus 148 -----~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~ 222 (323)
...+.........+++||+.++|+.|+++|++++|+||.... .......+..+++..+|+.++ ++++..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~-~~~~~~~~~~~~l~~~fd~v~-~s~~~~---- 149 (211)
T TIGR02247 76 GHDVRIAPVFPLLYGENTKLRPSMMAAIKTLRAKGFKTACITNNFPT-DHSAEEALLPGDIMALFDAVV-ESCLEG---- 149 (211)
T ss_pred CCCcCchhhHHHHhccccccChhHHHHHHHHHHCCCeEEEEeCCCCc-cchhhhHhhhhhhHhhCCEEE-EeeecC----
Confidence 011111122235779999999999999999999999994311 111233344568888999754 333332
Q ss_pred cccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcC
Q 020675 223 GQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG 302 (323)
Q Consensus 223 ~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGD 302 (323)
..||+|++ |+.+++++|++|++|+||||
T Consensus 150 --------------------------------------~~KP~p~~--------------~~~~~~~~g~~~~~~l~i~D 177 (211)
T TIGR02247 150 --------------------------------------LRKPDPRI--------------YQLMLERLGVAPEECVFLDD 177 (211)
T ss_pred --------------------------------------CCCCCHHH--------------HHHHHHHcCCCHHHeEEEcC
Confidence 23999999 99999999999999999999
Q ss_pred ChhhHHHHHHcCCCEEEEcC
Q 020675 303 SQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 303 s~~Di~aA~~aG~~~v~v~~ 322 (323)
+..|+.+|+++||.+|++.+
T Consensus 178 ~~~di~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 178 LGSNLKPAAALGITTIKVSD 197 (211)
T ss_pred CHHHHHHHHHcCCEEEEECC
Confidence 99999999999999999875
No 35
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.90 E-value=1.3e-22 Score=178.41 Aligned_cols=164 Identities=13% Similarity=0.124 Sum_probs=120.8
Q ss_pred EEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCc--H---HHHHHHHHh--------------
Q 020675 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD--E---DRMLVLFFN-------------- 146 (323)
Q Consensus 86 aViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~-------------- 146 (323)
+|||||||||+|+... +..+++.+++++|.. ..+.+.+..+.+..... . ...+...+.
T Consensus 2 ~viFD~DGTLiDs~~~-~~~a~~~~~~~~g~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
T TIGR01548 2 ALVLDMDGVMADVSQS-YRRAIIDTVEHFGGV--SVTHADIDHTKLAGNANNDWQLTHRLVVDGLNSASSERVRDAPTLE 78 (197)
T ss_pred ceEEecCceEEechHH-HHHHHHHHHHHHcCC--CCCHHHHHHHHHccCccCchHHHHHHHHHhhhcccchhccCCccHH
Confidence 7999999999999996 999999999999853 24556666665532211 0 000000000
Q ss_pred -HHHHHHHHHhcC------------CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeec
Q 020675 147 -RKNALDEFLASK------------DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVG 213 (323)
Q Consensus 147 -~~~~~~~~i~~~------------~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s 213 (323)
..+.+.+++... ...+.+++.++|+.|+++|++++|+|| +....++.+++.+|+..+|+.+ ++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~---~~~~~~~~~l~~~gl~~~f~~~-~~ 154 (197)
T TIGR01548 79 AVTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTG---RPRKDAAKFLTTHGLEILFPVQ-IW 154 (197)
T ss_pred HHHHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECC---CCHHHHHHHHHHcCchhhCCEE-Ee
Confidence 012333332211 123556679999999999999999999 6678999999999999999874 45
Q ss_pred hhhhhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCC
Q 020675 214 NEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP 293 (323)
Q Consensus 214 ~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~ 293 (323)
+++... ||+|++ |..+++++|++
T Consensus 155 ~~~~~~-------------------------------------------KP~p~~--------------~~~~~~~~~~~ 177 (197)
T TIGR01548 155 MEDCPP-------------------------------------------KPNPEP--------------LILAAKALGVE 177 (197)
T ss_pred ecCCCC-------------------------------------------CcCHHH--------------HHHHHHHhCcC
Confidence 444321 999999 99999999999
Q ss_pred CCcEEEEcCChhhHHHHHHc
Q 020675 294 VRNCFLIAGSQSGVAGAQRI 313 (323)
Q Consensus 294 p~~~v~VGDs~~Di~aA~~a 313 (323)
|++|++|||+.+|+++|+++
T Consensus 178 ~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 178 ACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred cccEEEEeCCHHHHHHHHhC
Confidence 99999999999999999975
No 36
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.88 E-value=2.7e-22 Score=181.82 Aligned_cols=173 Identities=17% Similarity=0.154 Sum_probs=116.7
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCC---CCCCCHHHHHHHHc---ccCCc----HHH----HHHHHHhH-
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLD---CANWTAPIYTDLLR---KSAGD----EDR----MLVLFFNR- 147 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~---~~~~~~~~~~~~~~---~~~~~----~~~----~~~~~~~~- 147 (323)
++|+|+||+||||+|+... +..+++++++.++.. ...|....+..+.. ..... ... .+...+..
T Consensus 9 ~~k~iiFDlDGTL~D~~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 87 (238)
T PRK10748 9 RISALTFDLDDTLYDNRPV-ILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLDA 87 (238)
T ss_pred CceeEEEcCcccccCChHH-HHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHHc
Confidence 4789999999999999985 788888877655211 11233332222221 10000 000 00000000
Q ss_pred ----H------HHHHHHHh--cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechh
Q 020675 148 ----K------NALDEFLA--SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE 215 (323)
Q Consensus 148 ----~------~~~~~~i~--~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~ 215 (323)
. +...+.+. ...+.++||+.++|+.|++. ++++|+||+ +.. ++.+|+..+|+.++ +++
T Consensus 88 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~---~~~-----~~~~gl~~~fd~i~-~~~ 157 (238)
T PRK10748 88 GLSAEEASAGADAAMINFAKWRSRIDVPQATHDTLKQLAKK-WPLVAITNG---NAQ-----PELFGLGDYFEFVL-RAG 157 (238)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHcC-CCEEEEECC---Cch-----HHHCCcHHhhceeE-ecc
Confidence 0 00101111 12367999999999999975 999999994 332 47899999999754 444
Q ss_pred hhhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCC
Q 020675 216 EVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR 295 (323)
Q Consensus 216 ~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~ 295 (323)
+... .||+|++ |+.+++++|++|+
T Consensus 158 ~~~~------------------------------------------~KP~p~~--------------~~~a~~~~~~~~~ 181 (238)
T PRK10748 158 PHGR------------------------------------------SKPFSDM--------------YHLAAEKLNVPIG 181 (238)
T ss_pred cCCc------------------------------------------CCCcHHH--------------HHHHHHHcCCChh
Confidence 4322 3999999 9999999999999
Q ss_pred cEEEEcCC-hhhHHHHHHcCCCEEEEcC
Q 020675 296 NCFLIAGS-QSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 296 ~~v~VGDs-~~Di~aA~~aG~~~v~v~~ 322 (323)
+|+||||+ ..|+.+|+++||++|+|..
T Consensus 182 ~~~~VGD~~~~Di~~A~~aG~~~i~v~~ 209 (238)
T PRK10748 182 EILHVGDDLTTDVAGAIRCGMQACWINP 209 (238)
T ss_pred HEEEEcCCcHHHHHHHHHCCCeEEEEcC
Confidence 99999999 5999999999999999864
No 37
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.88 E-value=1.2e-22 Score=181.53 Aligned_cols=181 Identities=14% Similarity=0.182 Sum_probs=129.7
Q ss_pred CCCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCC-CHHHHHHHH----------cccCC--cHHHHHHHHHh
Q 020675 80 NPPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANW-TAPIYTDLL----------RKSAG--DEDRMLVLFFN 146 (323)
Q Consensus 80 ~~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~-~~~~~~~~~----------~~~~~--~~~~~~~~~~~ 146 (323)
..|++|+|+||++|||+..... ....+.++.+.+|+++..- .+..+..-+ +...+ .....+...+.
T Consensus 3 ~~~~iravtfD~~~tLl~~~~~-~~~~y~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~lv~ 81 (237)
T KOG3085|consen 3 ELMRIRAVTFDAGGTLLATLPP-VMEVYCEIAEAYGLEYDDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPKLVE 81 (237)
T ss_pred cccceEEEEEeCCCceeecCCc-cHHHHHHHHHHhCCCCCHHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHHHHH
Confidence 4678999999999999986653 6788999999999984210 011111111 11112 11222211111
Q ss_pred H----------HHHH----HHHHhc---CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccc
Q 020675 147 R----------KNAL----DEFLAS---KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 209 (323)
Q Consensus 147 ~----------~~~~----~~~i~~---~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~ 209 (323)
. .+.+ ...+.. ...+..+++.++++.||++|..++++||. +...+.++..+|+..+||+
T Consensus 82 ~~f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~----d~r~~~~l~~~~l~~~fD~ 157 (237)
T KOG3085|consen 82 STFGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNF----DDRLRLLLLPLGLSAYFDF 157 (237)
T ss_pred HHhccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCC----cHHHHHHhhccCHHHhhhh
Confidence 1 1111 111111 24567789999999999999999999994 5667788999999999999
Q ss_pred eeechhhhhhhhhcccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHH
Q 020675 210 KIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEY 289 (323)
Q Consensus 210 ~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~ 289 (323)
++.|++... .||||+| |+.++++
T Consensus 158 vv~S~e~g~-------------------------------------------~KPDp~I--------------f~~al~~ 180 (237)
T KOG3085|consen 158 VVESCEVGL-------------------------------------------EKPDPRI--------------FQLALER 180 (237)
T ss_pred hhhhhhhcc-------------------------------------------CCCChHH--------------HHHHHHH
Confidence 877665443 4999999 9999999
Q ss_pred cCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEEcC
Q 020675 290 AEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 290 lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~ 322 (323)
+|+.|++|+||||.. +|+++|+++||++++|-+
T Consensus 181 l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~ 214 (237)
T KOG3085|consen 181 LGVKPEECVHIGDLLENDYEGARNLGWHAILVDN 214 (237)
T ss_pred hCCChHHeEEecCccccccHhHHHcCCEEEEEcc
Confidence 999999999999985 789999999999999865
No 38
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.88 E-value=1.6e-22 Score=174.36 Aligned_cols=100 Identities=23% Similarity=0.317 Sum_probs=86.2
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhH
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
.+++||+.++|+.|+++|++++|+||. .... ...+.++|+..+|+.++.+ ++..
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~---~~~~-~~~~~~~~l~~~f~~i~~~-~~~~--------------------- 137 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNS---PRDH-AVLVQELGLRDLFDVVIFS-GDVG--------------------- 137 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCC---chHH-HHHHHhcCCHHHCCEEEEc-CCCC---------------------
Confidence 679999999999999999999999994 4455 5566669999999986444 3322
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
..||+|++ |+.+++++|++|++|++|||+..|+.+|+++||.+|+
T Consensus 138 ---------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~ 182 (183)
T TIGR01509 138 ---------------------RGKPDPDI--------------YLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVL 182 (183)
T ss_pred ---------------------CCCCCHHH--------------HHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEe
Confidence 23999999 9999999999999999999999999999999999998
Q ss_pred E
Q 020675 320 M 320 (323)
Q Consensus 320 v 320 (323)
|
T Consensus 183 v 183 (183)
T TIGR01509 183 V 183 (183)
T ss_pred C
Confidence 5
No 39
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.88 E-value=5.9e-22 Score=174.62 Aligned_cols=104 Identities=13% Similarity=0.178 Sum_probs=87.0
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH-cCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~-lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
..++||+.++|+.|+++|++++|+||+ +.......+.. .++..+|+.++ ++++..
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~---~~~~~~~~~~~~~~l~~~fd~v~-~s~~~~-------------------- 138 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNT---NRLHTTFWPEEYPEVRAAADHIY-LSQDLG-------------------- 138 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCC---chhhHHHHHhhchhHHHhcCEEE-EecccC--------------------
Confidence 458999999999999999999999994 44555555544 47888898754 444432
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
..||+|++ |+.+++++|++|++|+||||+..|+.+|+++||++|
T Consensus 139 ----------------------~~KP~p~~--------------~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i 182 (199)
T PRK09456 139 ----------------------MRKPEARI--------------YQHVLQAEGFSAADAVFFDDNADNIEAANALGITSI 182 (199)
T ss_pred ----------------------CCCCCHHH--------------HHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEE
Confidence 24999999 999999999999999999999999999999999999
Q ss_pred EEcCC
Q 020675 319 VMRSR 323 (323)
Q Consensus 319 ~v~~g 323 (323)
++.++
T Consensus 183 ~~~~~ 187 (199)
T PRK09456 183 LVTDK 187 (199)
T ss_pred EecCC
Confidence 98753
No 40
>PLN02811 hydrolase
Probab=99.87 E-value=1.1e-21 Score=175.59 Aligned_cols=168 Identities=23% Similarity=0.289 Sum_probs=119.6
Q ss_pred cCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHH------------HhHHHHHHHHHhcC
Q 020675 91 VDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLF------------FNRKNALDEFLASK 158 (323)
Q Consensus 91 ~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~i~~~ 158 (323)
|||||+|+... +..+|.++++++|++ ++.+.+..+.+.........+... ....+.+.... ..
T Consensus 1 ~DGTL~Ds~~~-~~~a~~~~~~~~g~~---~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 75 (220)
T PLN02811 1 MDGLLLDTEKF-YTEVQEKILARYGKT---FDWSLKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAMLQDL-FP 75 (220)
T ss_pred CCCcceecHHH-HHHHHHHHHHHcCCC---CCHHHHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH-Hh
Confidence 79999999996 999999999999986 344444444443221111111100 00011111111 12
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHH-HHHHHcCCCccccceeechh--hhhhhhhcccccccccccCc
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIAR-SVVEKLGSERISKIKIVGNE--EVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~-~~l~~lgl~~~fd~~v~s~~--~~~~~~~~~~~~g~~v~~~~ 235 (323)
...++||+.++|+.|+++|++++|+||. ...... ...+..++.++|+.+ ++++ ++.
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~---~~~~~~~~~~~~~~l~~~f~~i-~~~~~~~~~----------------- 134 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGS---HKRHFDLKTQRHGELFSLMHHV-VTGDDPEVK----------------- 134 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCC---chhhHHHHHcccHHHHhhCCEE-EECChhhcc-----------------
Confidence 3678999999999999999999999994 333333 334445778889875 4444 332
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcC---CCCCcEEEEcCChhhHHHHHH
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE---KPVRNCFLIAGSQSGVAGAQR 312 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lg---v~p~~~v~VGDs~~Di~aA~~ 312 (323)
..||+|++ |..+++++| ++|++|+||||+..|+++|++
T Consensus 135 -------------------------~~KP~p~~--------------~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~ 175 (220)
T PLN02811 135 -------------------------QGKPAPDI--------------FLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKN 175 (220)
T ss_pred -------------------------CCCCCcHH--------------HHHHHHHhCCCCCCccceEEEeccHhhHHHHHH
Confidence 23999999 999999997 999999999999999999999
Q ss_pred cCCCEEEEcCC
Q 020675 313 IGMPCVVMRSR 323 (323)
Q Consensus 313 aG~~~v~v~~g 323 (323)
+||++|+|.++
T Consensus 176 aG~~~i~v~~~ 186 (220)
T PLN02811 176 AGMSVVMVPDP 186 (220)
T ss_pred CCCeEEEEeCC
Confidence 99999999764
No 41
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.87 E-value=1.1e-21 Score=165.51 Aligned_cols=154 Identities=20% Similarity=0.291 Sum_probs=114.9
Q ss_pred EEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhHHHHHHHHHhcCCCCCChh
Q 020675 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDAPLRPG 165 (323)
Q Consensus 86 aViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~pg 165 (323)
+|+||+||||+|+... ...+|+++++++|.+ .+.+....+... ..+ .......+.+.. + ......+||
T Consensus 1 ~iifD~DGTL~d~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~g~~~---~~~-~~~~~~~~~~~~-~-~~~~~~~~g 68 (154)
T TIGR01549 1 AILFDIDGTLVDSSFA-IRRAFEETLEEFGED-----FQALKALRGLAE---ELL-YRIATSFEELLG-Y-DAEEAYIRG 68 (154)
T ss_pred CeEecCCCcccccHHH-HHHHHHHHHHHhccc-----HHHHHHHHccCh---HHH-HHHHHHHHHHhC-c-chhheeccC
Confidence 4899999999999875 889999999998864 334444443321 111 111111122222 1 123557899
Q ss_pred HHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHHH
Q 020675 166 VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARK 245 (323)
Q Consensus 166 v~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k 245 (323)
+.++|+.|+++|++++|+|| +....+...++.+ +..+|+.+ ++.++..
T Consensus 69 ~~e~l~~L~~~g~~~~i~T~---~~~~~~~~~~~~~-l~~~f~~i-~~~~~~~--------------------------- 116 (154)
T TIGR01549 69 AADLLKRLKEAGIKLGIISN---GSLRAQKLLLRKH-LGDYFDLI-LGSDEFG--------------------------- 116 (154)
T ss_pred HHHHHHHHHHCcCeEEEEeC---CchHHHHHHHHHH-HHhcCcEE-EecCCCC---------------------------
Confidence 99999999999999999999 5678888888887 78888864 4444332
Q ss_pred HhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 020675 246 AVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (323)
Q Consensus 246 ~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG 314 (323)
.||+|++ |..+++++|++| +|++|||+..|+++|+++|
T Consensus 117 ----------------~Kp~~~~--------------~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 117 ----------------AKPEPEI--------------FLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred ----------------CCcCHHH--------------HHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 2999999 999999999999 9999999999999999998
No 42
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.87 E-value=1.5e-21 Score=174.59 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=91.8
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
..+++|++.++|+.|+.+ ++++|+|| +....+...++.+|+.++||.++++.+..
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTN---g~~~~~~~~l~~~gl~~~Fd~v~~s~~~g--------------------- 151 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTN---GARPHQERKLRQLGLLDYFDAVFISEDVG--------------------- 151 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeC---CChHHHHHHHHHcCChhhhheEEEecccc---------------------
Confidence 478999999999999999 99999999 66789999999999999999976554322
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPC 317 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~ 317 (323)
..||+|++ |+.+++++|++|++|+||||+. +||.+|+++||++
T Consensus 152 ----------------------~~KP~~~~--------------f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~ 195 (229)
T COG1011 152 ----------------------VAKPDPEI--------------FEYALEKLGVPPEEALFVGDSLENDILGARALGMKT 195 (229)
T ss_pred ----------------------cCCCCcHH--------------HHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEE
Confidence 34999999 9999999999999999999996 5779999999999
Q ss_pred EEEcC
Q 020675 318 VVMRS 322 (323)
Q Consensus 318 v~v~~ 322 (323)
|++..
T Consensus 196 vwi~~ 200 (229)
T COG1011 196 VWINR 200 (229)
T ss_pred EEECC
Confidence 99864
No 43
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.86 E-value=5e-21 Score=168.16 Aligned_cols=165 Identities=12% Similarity=0.109 Sum_probs=108.9
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCc-HHHHHH----HHHhHHHHHHHHHhcC
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGD-EDRMLV----LFFNRKNALDEFLASK 158 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~i~~~ 158 (323)
+|+||||+||||+|+. .++.++++++|++. +.+....+..... ...... ......+.+.+.....
T Consensus 2 ~k~viFDlDGTLiD~~-----~~~~~~~~~~g~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (197)
T PHA02597 2 KPTILTDVDGVLLSWQ-----SGLPYFAQKYNIPT-----DHILKMIQDERFRDPGELFGCDQELAKKLIEKYNNSDFIR 71 (197)
T ss_pred CcEEEEecCCceEchh-----hccHHHHHhcCCCH-----HHHHHHHhHhhhcCHHHHhcccHHHHHHHhhhhhHHHHHH
Confidence 6899999999999954 34678888888852 2222222221110 011100 0000112222111123
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccc---eeechhhhhhhhhcccccccccccCc
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI---KIVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~---~v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
...++||+.++|+.|++. ++++++||. ........++.+++..+|+. .+++.++
T Consensus 72 ~~~~~pG~~e~L~~L~~~-~~~~i~Tn~---~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~------------------- 128 (197)
T PHA02597 72 YLSAYDDALDVINKLKED-YDFVAVTAL---GDSIDALLNRQFNLNALFPGAFSEVLMCGH------------------- 128 (197)
T ss_pred hccCCCCHHHHHHHHHhc-CCEEEEeCC---ccchhHHHHhhCCHHHhCCCcccEEEEecc-------------------
Confidence 366999999999999987 578888983 34555556677888765532 1233221
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHc--
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI-- 313 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~a-- 313 (323)
.||+|++ |+.+++++| |++++||||+..|+++|+++
T Consensus 129 --------------------------~~~kp~~--------------~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~ 166 (197)
T PHA02597 129 --------------------------DESKEKL--------------FIKAKEKYG--DRVVCFVDDLAHNLDAAHEALS 166 (197)
T ss_pred --------------------------CcccHHH--------------HHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHc
Confidence 1677788 999999999 89999999999999999999
Q ss_pred CCCEEEEcCC
Q 020675 314 GMPCVVMRSR 323 (323)
Q Consensus 314 G~~~v~v~~g 323 (323)
||++|++.+|
T Consensus 167 Gi~~i~~~~~ 176 (197)
T PHA02597 167 QLPVIHMLRG 176 (197)
T ss_pred CCcEEEecch
Confidence 9999999875
No 44
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.86 E-value=1.2e-20 Score=167.93 Aligned_cols=176 Identities=23% Similarity=0.347 Sum_probs=133.0
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHh----H-------HHH
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN----R-------KNA 150 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-------~~~ 150 (323)
..+-+++||+||||+|++.. +.+++++.+.++|.. ++.+......|....+..+.+..... . .+.
T Consensus 8 ~~~~~~lfD~dG~lvdte~~-y~~~~~~~~~~ygk~---~~~~~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e~~~~ 83 (222)
T KOG2914|consen 8 LKVSACLFDMDGTLVDTEDL-YTEAWQELLDRYGKP---YPWDVKVKSMGKRTSEAARLFVKKLPDPVSREEFNKEEEEI 83 (222)
T ss_pred cceeeEEEecCCcEEecHHH-HHHHHHHHHHHcCCC---ChHHHHHHHcCCCHHHHHHHHHhhcCCCCCHHHHHHHHHHH
Confidence 34559999999999999997 999999999999985 55666655555443222222210000 0 111
Q ss_pred HHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcC-CCccccceeechh-hhhhhhhcccccc
Q 020675 151 LDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNE-EVERSLYGQFVLG 228 (323)
Q Consensus 151 ~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lg-l~~~fd~~v~s~~-~~~~~~~~~~~~g 228 (323)
..++ .....+.||+.++++.|+.+|++++++|++ .....+..+.+++ +...|...+.+.+ ++.+
T Consensus 84 ~~~~--~~~~~~~PGa~kLv~~L~~~gip~alat~s---~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~--------- 149 (222)
T KOG2914|consen 84 LDRL--FMNSILMPGAEKLVNHLKNNGIPVALATSS---TSASFELKISRHEDIFKNFSHVVLGDDPEVKN--------- 149 (222)
T ss_pred HHHh--ccccccCCcHHHHHHHHHhCCCCeeEEecC---CcccHHHHHHHhhHHHHhcCCCeecCCccccC---------
Confidence 1221 234678999999999999999999999994 4577777788776 6777777655322 2222
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCC-CcEEEEcCChhhH
Q 020675 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPV-RNCFLIAGSQSGV 307 (323)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p-~~~v~VGDs~~Di 307 (323)
.||+|++ |..+++++|..| +.|++++|+..++
T Consensus 150 ---------------------------------gKP~Pdi--------------~l~A~~~l~~~~~~k~lVfeds~~Gv 182 (222)
T KOG2914|consen 150 ---------------------------------GKPDPDI--------------YLKAAKRLGVPPPSKCLVFEDSPVGV 182 (222)
T ss_pred ---------------------------------CCCCchH--------------HHHHHHhcCCCCccceEEECCCHHHH
Confidence 3999999 999999999999 9999999999999
Q ss_pred HHHHHcCCCEEEEcC
Q 020675 308 AGAQRIGMPCVVMRS 322 (323)
Q Consensus 308 ~aA~~aG~~~v~v~~ 322 (323)
++|++|||++|+|.+
T Consensus 183 ~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 183 QAAKAAGMQVVGVAT 197 (222)
T ss_pred HHHHhcCCeEEEecC
Confidence 999999999999975
No 45
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.85 E-value=2.1e-20 Score=166.72 Aligned_cols=178 Identities=16% Similarity=0.141 Sum_probs=117.2
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhH-----HHHHHHHH
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-----KNALDEFL 155 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i 155 (323)
.+++|+|+|||||||+++.. +.++++.+|.+. ...+......... ..........+.. .+.+.+..
T Consensus 11 ~~~~k~iiFD~DGTL~~~~~------~~~l~~~~g~~~--~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (219)
T TIGR00338 11 LRSKKLVVFDMDSTLINAET------IDEIAKIAGVEE--EVSEITERAMRGE-LDFKASLRERVALLKGLPVELLKEVR 81 (219)
T ss_pred hccCCEEEEeCcccCCCchH------HHHHHHHhCCHH--HHHHHHHHHHcCC-CCHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 45678999999999999754 356666777642 1112222222211 1111111111110 22333332
Q ss_pred hcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCc
Q 020675 156 ASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 156 ~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
. ..+++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|...+...+.. +.+.+.+..
T Consensus 82 -~-~~~~~~g~~~~l~~l~~~g~~~~IvS~---~~~~~~~~~l~~~~i~~~~~~~~~~~~~~----~~~~~~~~~----- 147 (219)
T TIGR00338 82 -E-NLPLTEGAEELVKTLKEKGYKVAVISG---GFDLFAEHVKDKLGLDAAFANRLEVEDGK----LTGLVEGPI----- 147 (219)
T ss_pred -h-cCCcCCCHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHcCCCceEeeEEEEECCE----EEEEecCcc-----
Confidence 2 367999999999999999999999999 67889999999999998887543332111 111111110
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
...+|.|.+ |+.++++++++|++|+||||+.+|+.+|+++|+
T Consensus 148 ------------------------~~~~~k~~~--------------~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~ 189 (219)
T TIGR00338 148 ------------------------VDASYKGKT--------------LLILLRKEGISPENTVAVGDGANDLSMIKAAGL 189 (219)
T ss_pred ------------------------cCCcccHHH--------------HHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCC
Confidence 011456666 899999999999999999999999999999999
Q ss_pred CEEE
Q 020675 316 PCVV 319 (323)
Q Consensus 316 ~~v~ 319 (323)
.+++
T Consensus 190 ~i~~ 193 (219)
T TIGR00338 190 GIAF 193 (219)
T ss_pred eEEe
Confidence 8654
No 46
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.82 E-value=1e-20 Score=162.85 Aligned_cols=157 Identities=17% Similarity=0.185 Sum_probs=107.3
Q ss_pred EEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCH-----HHHHHHHcccCCcHHH----HHHHHHhH---------
Q 020675 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTA-----PIYTDLLRKSAGDEDR----MLVLFFNR--------- 147 (323)
Q Consensus 86 aViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~----~~~~~~~~--------- 147 (323)
+|+||+||||+|++.. +..++++++.+.+.....|.. .......+.. ..... ........
T Consensus 1 ~viFD~DGTL~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~ 78 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGG-VRACLAAIAPEGGAFSDLWRAKQQEYSWRRSLMGDR-RAFPEDTVRALRYIADRLGLDAEPKY 78 (175)
T ss_pred CeEEecCCcCcccHHH-HHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCc-CCHHHHHHHHHHHHHHHcCCCCCHHH
Confidence 5899999999999985 888888887764431001221 1111111111 00001 11111110
Q ss_pred HHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccc
Q 020675 148 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (323)
Q Consensus 148 ~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~ 227 (323)
.+.+.+.. ..++++||+.++|+ +++|+|| +....+...++++|+..+|+.+ ++++++..
T Consensus 79 ~~~~~~~~--~~~~~~~g~~~~L~-------~~~i~Tn---~~~~~~~~~l~~~~l~~~fd~v-~~~~~~~~-------- 137 (175)
T TIGR01493 79 GERLRDAY--KNLPPWPDSAAALA-------RVAILSN---ASHWAFDQFAQQAGLPWYFDRA-FSVDTVRA-------- 137 (175)
T ss_pred HHHHHHHH--hcCCCCCchHHHHH-------HHhhhhC---CCHHHHHHHHHHCCCHHHHhhh-ccHhhcCC--------
Confidence 11222212 24679999999998 3889999 5678889999999999999974 56655432
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 020675 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (323)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di 307 (323)
.||+|++ |+.+++++|++|++|+||||+..|+
T Consensus 138 ----------------------------------~KP~p~~--------------f~~~~~~~~~~p~~~l~vgD~~~Di 169 (175)
T TIGR01493 138 ----------------------------------YKPDPVV--------------YELVFDTVGLPPDRVLMVAAHQWDL 169 (175)
T ss_pred ----------------------------------CCCCHHH--------------HHHHHHHHCCCHHHeEeEecChhhH
Confidence 3999999 9999999999999999999999999
Q ss_pred HHHHHc
Q 020675 308 AGAQRI 313 (323)
Q Consensus 308 ~aA~~a 313 (323)
.+|+++
T Consensus 170 ~~A~~~ 175 (175)
T TIGR01493 170 IGARKF 175 (175)
T ss_pred HHHhcC
Confidence 999874
No 47
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.82 E-value=3.6e-19 Score=156.04 Aligned_cols=178 Identities=13% Similarity=0.164 Sum_probs=114.2
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHH---HH-h-----HHHHHHHH
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVL---FF-N-----RKNALDEF 154 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~-----~~~~~~~~ 154 (323)
+|+|+|||||||+|.... +..+...+|... ....... .+............. .+ . ..+.+.+.
T Consensus 4 ~k~viFD~DGTLid~~~~-----~~~~~~~~~~~~--~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (201)
T TIGR01491 4 IKLIIFDLDGTLTDVMSS-----WEYLHRRLETCG--LAKKNAE-LFFSGRISYEEWARLDASLWKRRSGRLRREEVEEI 75 (201)
T ss_pred ceEEEEeCCCCCcCCccH-----HHHHHHHhCchH--HHHHHHH-HHHcCCCCHHHHHHHHHHHHhhcccCCCHHHHHHH
Confidence 789999999999997652 233334455541 1111111 111111111111110 11 0 01223333
Q ss_pred HhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccC
Q 020675 155 LASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSG 234 (323)
Q Consensus 155 i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~ 234 (323)
+ ..++++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|...+.+.+..
T Consensus 76 ~--~~~~~~~g~~e~l~~l~~~g~~~~IvS~---~~~~~~~~~l~~~g~~~~~~~~~~~~~~g----------------- 133 (201)
T TIGR01491 76 F--KEISLRDYAEELVRWLKEKGLKTAIVSG---GIMCLAKKVAEKLNPDYVYSNELVFDEKG----------------- 133 (201)
T ss_pred H--HhCCCCccHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHHHhCCCeEEEEEEEEcCCC-----------------
Confidence 2 2367999999999999999999999999 67899999999999998887654433211
Q ss_pred cchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 020675 235 VDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (323)
Q Consensus 235 ~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG 314 (323)
..||++... ..+.++.+. ++.+++++|+++++++||||+.+|+.+|+++|
T Consensus 134 --------------------------~~~p~~~~~-~~~~~k~~~---~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag 183 (201)
T TIGR01491 134 --------------------------FIQPDGIVR-VTFDNKGEA---VERLKRELNPSLTETVAVGDSKNDLPMFEVAD 183 (201)
T ss_pred --------------------------eEecceeeE-EccccHHHH---HHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcC
Confidence 114443220 012222222 67888999999999999999999999999999
Q ss_pred CCEEEEc
Q 020675 315 MPCVVMR 321 (323)
Q Consensus 315 ~~~v~v~ 321 (323)
+.+++..
T Consensus 184 ~~~a~~~ 190 (201)
T TIGR01491 184 ISISLGD 190 (201)
T ss_pred CeEEECC
Confidence 9887754
No 48
>PLN02954 phosphoserine phosphatase
Probab=99.81 E-value=3.8e-19 Score=159.07 Aligned_cols=180 Identities=14% Similarity=0.137 Sum_probs=114.6
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHh----HHHHHHHHHhc
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN----RKNALDEFLAS 157 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~ 157 (323)
+++|+|+|||||||++++. +.++++++|... ...+.+..+.+.... ..+.....+. ..+.+.+.+..
T Consensus 10 ~~~k~viFDfDGTL~~~~~------~~~~~~~~g~~~--~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDEG------IDELAEFCGAGE--AVAEWTAKAMGGSVP-FEEALAARLSLFKPSLSQVEEFLEK 80 (224)
T ss_pred ccCCEEEEeCCCcccchHH------HHHHHHHcCChH--HHHHHHHHHHCCCCC-HHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 5688999999999999865 377888888741 113334444432222 2221111111 12334444443
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC--ccccceeechhhhhhhhhcccccccccccCc
Q 020675 158 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE--RISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 158 ~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~--~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
....++||+.++|+.|+++|++++|+|+ +....++.+++.+|+. .+|...+...++.. +.|....
T Consensus 81 ~~~~l~pg~~e~l~~l~~~g~~~~IvS~---~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~-------~~g~~~~--- 147 (224)
T PLN02954 81 RPPRLSPGIPELVKKLRARGTDVYLVSG---GFRQMIAPVAAILGIPPENIFANQILFGDSGE-------YAGFDEN--- 147 (224)
T ss_pred ccCCCCccHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHhCCChhhEEEeEEEEcCCCc-------EECccCC---
Confidence 3456899999999999999999999999 6789999999999997 46654332221110 0000000
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
++. ...+|.|++ ++.+++++|. ++|++|||+.+|+.+|+++|+
T Consensus 148 ~~~---------------------~~~~~K~~~--------------i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~ 190 (224)
T PLN02954 148 EPT---------------------SRSGGKAEA--------------VQHIKKKHGY--KTMVMIGDGATDLEARKPGGA 190 (224)
T ss_pred Ccc---------------------cCCccHHHH--------------HHHHHHHcCC--CceEEEeCCHHHHHhhhcCCC
Confidence 000 001333344 7788888875 689999999999999999998
Q ss_pred CEEEE
Q 020675 316 PCVVM 320 (323)
Q Consensus 316 ~~v~v 320 (323)
.++..
T Consensus 191 ~~~~~ 195 (224)
T PLN02954 191 DLFIG 195 (224)
T ss_pred CEEEe
Confidence 87654
No 49
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.80 E-value=1.8e-19 Score=151.48 Aligned_cols=107 Identities=14% Similarity=0.167 Sum_probs=83.1
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCC------------hHHHHHHHHHcCCCcc--ccceeechhhhhhhhhcccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSG------------DRIARSVVEKLGSERI--SKIKIVGNEEVERSLYGQFV 226 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~------------~~~~~~~l~~lgl~~~--fd~~v~s~~~~~~~~~~~~~ 226 (323)
.++||+.++|+.|+++|++++|+||..+.. ...+...++.+|+... |...+..+++.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~--------- 97 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNC--------- 97 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCC---------
Confidence 479999999999999999999999943100 1456677888888632 21111111111
Q ss_pred cccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhh
Q 020675 227 LGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG 306 (323)
Q Consensus 227 ~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~D 306 (323)
+..||+|++ |+.+++++|++|++|+||||+..|
T Consensus 98 ---------------------------------~~~KP~~~~--------------~~~~~~~~~~~~~e~i~IGDs~~D 130 (147)
T TIGR01656 98 ---------------------------------SCRKPKPGL--------------ILEALKRLGVDASRSLVVGDRLRD 130 (147)
T ss_pred ---------------------------------CCCCCCHHH--------------HHHHHHHcCCChHHEEEEcCCHHH
Confidence 124999999 999999999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCC
Q 020675 307 VAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 307 i~aA~~aG~~~v~v~~g 323 (323)
+++|+++||++|+|..|
T Consensus 131 i~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 131 LQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHCCCCEEEecCC
Confidence 99999999999999765
No 50
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.78 E-value=4.5e-18 Score=160.40 Aligned_cols=178 Identities=15% Similarity=0.146 Sum_probs=116.9
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhH-----HHHHHHHH
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-----KNALDEFL 155 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i 155 (323)
...++.|+|||||||+.. +++.++++..|... ...+.....+... -.........+.. ...+.+.
T Consensus 107 ~~~~~LvvfDmDGTLI~~------e~i~eia~~~g~~~--~v~~it~~~m~Ge-ldf~esl~~rv~~l~g~~~~il~~v- 176 (322)
T PRK11133 107 LRTPGLLVMDMDSTAIQI------ECIDEIAKLAGTGE--EVAEVTERAMRGE-LDFEASLRQRVATLKGADANILQQV- 176 (322)
T ss_pred ccCCCEEEEECCCCCcch------HHHHHHHHHhCCch--HHHHHHHHHHcCC-cCHHHHHHHHHHHhCCCCHHHHHHH-
Confidence 346789999999999943 45677777777752 1112222222211 1111111111110 1223332
Q ss_pred hcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCc
Q 020675 156 ASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 156 ~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
. ..++++||++++|+.|+++|++++|+|+ ++....+.+++++|++..+...+. ...+.+++.+.|..+
T Consensus 177 ~-~~l~l~pGa~elL~~Lk~~G~~~aIvSg---g~~~~~~~l~~~Lgld~~~an~le----i~dg~ltg~v~g~iv---- 244 (322)
T PRK11133 177 R-ENLPLMPGLTELVLKLQALGWKVAIASG---GFTYFADYLRDKLRLDAAVANELE----IMDGKLTGNVLGDIV---- 244 (322)
T ss_pred H-HhCCCChhHHHHHHHHHHcCCEEEEEEC---CcchhHHHHHHHcCCCeEEEeEEE----EECCEEEeEecCccC----
Confidence 2 2478999999999999999999999999 667788889999999876543221 111222222323211
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
..||.+++ ++.+++++|+++++|++|||+.||+.|++.||+
T Consensus 245 -------------------------~~k~K~~~--------------L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGl 285 (322)
T PRK11133 245 -------------------------DAQYKADT--------------LTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGL 285 (322)
T ss_pred -------------------------CcccHHHH--------------HHHHHHHcCCChhhEEEEECCHHHHHHHHHCCC
Confidence 12566666 899999999999999999999999999999999
Q ss_pred CEEE
Q 020675 316 PCVV 319 (323)
Q Consensus 316 ~~v~ 319 (323)
.+++
T Consensus 286 giA~ 289 (322)
T PRK11133 286 GIAY 289 (322)
T ss_pred eEEe
Confidence 8876
No 51
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.77 E-value=4.9e-18 Score=152.01 Aligned_cols=102 Identities=14% Similarity=0.118 Sum_probs=84.8
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHc---CCCccccceeechhhhhhhhhcccccccccccCc
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---GSERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~l---gl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
..+++||+.++|+.|+++|++++|+|| +........++.. ++..+|+..+ . ... .
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn---~s~~~~~~~~~~~~~~~L~~~f~~~f-d-~~~-g---------------- 150 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSS---GSVPAQKLLFGHSDAGNLTPYFSGYF-D-TTV-G---------------- 150 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHhhccccchhhhcceEE-E-eCc-c----------------
Confidence 356999999999999999999999999 4566677777765 5666666532 1 111 0
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
.||+|++ |..+++++|++|++|+||||+..|+++|+++||
T Consensus 151 --------------------------~KP~p~~--------------y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~ 190 (220)
T TIGR01691 151 --------------------------LKTEAQS--------------YVKIAGQLGSPPREILFLSDIINELDAARKAGL 190 (220)
T ss_pred --------------------------cCCCHHH--------------HHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCC
Confidence 2999999 999999999999999999999999999999999
Q ss_pred CEEEEcC
Q 020675 316 PCVVMRS 322 (323)
Q Consensus 316 ~~v~v~~ 322 (323)
.+|++.+
T Consensus 191 ~ti~v~r 197 (220)
T TIGR01691 191 HTGQLVR 197 (220)
T ss_pred EEEEEEC
Confidence 9999864
No 52
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.77 E-value=2.2e-18 Score=149.20 Aligned_cols=116 Identities=10% Similarity=0.074 Sum_probs=81.9
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCC-----C-------hHHHHHHHHHcCCCccccceeechhhhhhhhhccccc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-----G-------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~-----~-------~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~ 227 (323)
+.++||+.++|+.|+++|++++|+||.+.. . .......+..+++. |+.++.+.... .
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~-~-------- 93 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHP-E-------- 93 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCC-c--------
Confidence 458999999999999999999999995310 0 12334556666665 44432221100 0
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 020675 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (323)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di 307 (323)
+.+.. ....+.+||+|++ |..+++++|++|++|+||||+..|+
T Consensus 94 ~~~~~-----------------------~~~~~~~KP~p~~--------------~~~a~~~~~~~~~~~v~VGDs~~Di 136 (176)
T TIGR00213 94 GVEEF-----------------------RQVCDCRKPKPGM--------------LLQARKELHIDMAQSYMVGDKLEDM 136 (176)
T ss_pred ccccc-----------------------cCCCCCCCCCHHH--------------HHHHHHHcCcChhhEEEEcCCHHHH
Confidence 00000 0001235999999 9999999999999999999999999
Q ss_pred HHHHHcCCCE-EEEcCC
Q 020675 308 AGAQRIGMPC-VVMRSR 323 (323)
Q Consensus 308 ~aA~~aG~~~-v~v~~g 323 (323)
++|+++|+++ ++|.+|
T Consensus 137 ~aA~~aG~~~~i~v~~g 153 (176)
T TIGR00213 137 QAGVAAKVKTNVLVRTG 153 (176)
T ss_pred HHHHHCCCcEEEEEecC
Confidence 9999999998 788765
No 53
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.77 E-value=1.7e-18 Score=147.94 Aligned_cols=106 Identities=9% Similarity=0.124 Sum_probs=87.7
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCC------------ChHHHHHHHHHcCCCccccceeec----hhhhhhhhhc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS------------GDRIARSVVEKLGSERISKIKIVG----NEEVERSLYG 223 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~------------~~~~~~~~l~~lgl~~~fd~~v~s----~~~~~~~~~~ 223 (323)
++++||+.++|+.|+++|++++|+||.+.- ....+..+++.+|+. |+.++++ +++.
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~------ 99 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNC------ 99 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCC------
Confidence 458999999999999999999999994200 235677889999997 7654444 2222
Q ss_pred ccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 020675 224 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 303 (323)
Q Consensus 224 ~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs 303 (323)
+.+||+|++ |+.++++++++|++|+||||+
T Consensus 100 ------------------------------------~~~KP~~~~--------------~~~~~~~~~~~~~e~l~IGD~ 129 (161)
T TIGR01261 100 ------------------------------------DCRKPKIKL--------------LEPYLKKNLIDKARSYVIGDR 129 (161)
T ss_pred ------------------------------------CCCCCCHHH--------------HHHHHHHcCCCHHHeEEEeCC
Confidence 134999999 999999999999999999999
Q ss_pred hhhHHHHHHcCCCEEEEcCC
Q 020675 304 QSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 304 ~~Di~aA~~aG~~~v~v~~g 323 (323)
.+|+++|+++||.++++.++
T Consensus 130 ~~Di~~A~~aGi~~i~~~~~ 149 (161)
T TIGR01261 130 ETDMQLAENLGIRGIQYDEE 149 (161)
T ss_pred HHHHHHHHHCCCeEEEEChh
Confidence 99999999999999999764
No 54
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.76 E-value=4.5e-18 Score=140.00 Aligned_cols=97 Identities=14% Similarity=0.177 Sum_probs=82.1
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCC--------hHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSG--------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~--------~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~ 232 (323)
.++||+.++|+.|+++|++++|+|| +. ...+...++.+++...+. +++. .
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn---~~~~~~~~~~~~~~~~~l~~~~l~~~~~--~~~~--~--------------- 82 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTN---QSGIGRGKFSSGRVARRLEELGVPIDVL--YACP--H--------------- 82 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEEC---CccccccHHHHHHHHHHHHHCCCCEEEE--EECC--C---------------
Confidence 3789999999999999999999999 44 567888899999863322 2222 1
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHc-CCCCCcEEEEcC-ChhhHHHH
Q 020675 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA-EKPVRNCFLIAG-SQSGVAGA 310 (323)
Q Consensus 233 ~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~l-gv~p~~~v~VGD-s~~Di~aA 310 (323)
..||+|++ |+.+++++ +++|++++|||| +..|+.+|
T Consensus 83 ----------------------------~~KP~~~~--------------~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A 120 (132)
T TIGR01662 83 ----------------------------CRKPKPGM--------------FLEALKRFNEIDPEESVYVGDQDLTDLQAA 120 (132)
T ss_pred ----------------------------CCCCChHH--------------HHHHHHHcCCCChhheEEEcCCCcccHHHH
Confidence 13999999 99999999 599999999999 79999999
Q ss_pred HHcCCCEEEEc
Q 020675 311 QRIGMPCVVMR 321 (323)
Q Consensus 311 ~~aG~~~v~v~ 321 (323)
+++|+.+|++.
T Consensus 121 ~~~Gi~~i~~~ 131 (132)
T TIGR01662 121 KRAGLAFILVA 131 (132)
T ss_pred HHCCCeEEEee
Confidence 99999999986
No 55
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.76 E-value=1.3e-17 Score=144.94 Aligned_cols=184 Identities=15% Similarity=0.164 Sum_probs=126.5
Q ss_pred CCCceEEEEecCCccccccccchHHHHH----HHH-HHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhH-HHHHHHH
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFN----VAF-QKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-KNALDEF 154 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~----~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 154 (323)
.+.++.++||+|.||+.... +...+.. +.| .++|++.. -..+....++...+............. ...|.++
T Consensus 12 ~~~~~~l~FDiDdtLYp~St-~i~~~~~~nI~~f~~eklgi~~e-~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~~ 89 (244)
T KOG3109|consen 12 GPNYKCLFFDIDDTLYPLST-GIQLMMRNNIQEFFVEKLGISEE-EAEELRESLYKEYGLTMAGLKAVGYIFDADEYHRF 89 (244)
T ss_pred CccceEEEEecccccccCch-hHHHHHHHHHHHHHHHHhCCChh-hhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHHH
Confidence 34789999999999998765 3444443 443 45888741 112232233222211111221111111 3455555
Q ss_pred Hh----cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccc
Q 020675 155 LA----SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 230 (323)
Q Consensus 155 i~----~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~ 230 (323)
+. -..++|.+-.+++|-.|++++ .++.|| +....+..++.++|++++|+.++...... +.+.
T Consensus 90 V~~~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTN---a~k~HA~r~Lk~LGieDcFegii~~e~~n---------p~~~ 155 (244)
T KOG3109|consen 90 VHGRLPLQDLKPDPVLRNLLLSLKKRR--KWIFTN---AYKVHAIRILKKLGIEDCFEGIICFETLN---------PIEK 155 (244)
T ss_pred hhccCcHhhcCCCHHHHHHHHhCcccc--EEEecC---CcHHHHHHHHHHhChHHhccceeEeeccC---------CCCC
Confidence 43 234789999999999999875 899999 67799999999999999999864432111 0000
Q ss_pred cccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCC-CCcEEEEcCChhhHHH
Q 020675 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNCFLIAGSQSGVAG 309 (323)
Q Consensus 231 v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~-p~~~v~VGDs~~Di~a 309 (323)
. -+.||+++. |+.+++..|++ |.+++||+||.++|++
T Consensus 156 ~----------------------------~vcKP~~~a--------------fE~a~k~agi~~p~~t~FfDDS~~NI~~ 193 (244)
T KOG3109|consen 156 T----------------------------VVCKPSEEA--------------FEKAMKVAGIDSPRNTYFFDDSERNIQT 193 (244)
T ss_pred c----------------------------eeecCCHHH--------------HHHHHHHhCCCCcCceEEEcCchhhHHH
Confidence 0 023999998 99999999998 9999999999999999
Q ss_pred HHHcCCCEEEEcC
Q 020675 310 AQRIGMPCVVMRS 322 (323)
Q Consensus 310 A~~aG~~~v~v~~ 322 (323)
|++.||++++|..
T Consensus 194 ak~vGl~tvlv~~ 206 (244)
T KOG3109|consen 194 AKEVGLKTVLVGR 206 (244)
T ss_pred HHhccceeEEEEe
Confidence 9999999999863
No 56
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.76 E-value=3.4e-18 Score=148.51 Aligned_cols=110 Identities=15% Similarity=0.072 Sum_probs=82.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCC----C--------hHHHHHHHHHcCCCccccceeechhhhhhhhhccccc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS----G--------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~----~--------~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~ 227 (323)
+.++||+.++|+.|+++|++++|+||.+.. . ...+...++.+|+ .|+.++.+......
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~-------- 97 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPED-------- 97 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCC--------
Confidence 358999999999999999999999995210 0 1234455666776 35543332110000
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 020675 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (323)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di 307 (323)
. .+..||+|++ |..+++++|++|++|+||||+.+|+
T Consensus 98 --~----------------------------~~~~KP~p~~--------------~~~~~~~l~~~~~~~~~VgDs~~Di 133 (181)
T PRK08942 98 --G----------------------------CDCRKPKPGM--------------LLSIAERLNIDLAGSPMVGDSLRDL 133 (181)
T ss_pred --C----------------------------CcCCCCCHHH--------------HHHHHHHcCCChhhEEEEeCCHHHH
Confidence 0 0124999999 9999999999999999999999999
Q ss_pred HHHHHcCCCEEEEcCC
Q 020675 308 AGAQRIGMPCVVMRSR 323 (323)
Q Consensus 308 ~aA~~aG~~~v~v~~g 323 (323)
.+|+++||.+|++.+|
T Consensus 134 ~~A~~aG~~~i~v~~g 149 (181)
T PRK08942 134 QAAAAAGVTPVLVRTG 149 (181)
T ss_pred HHHHHCCCeEEEEcCC
Confidence 9999999999999764
No 57
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.76 E-value=3.6e-19 Score=153.53 Aligned_cols=106 Identities=12% Similarity=0.034 Sum_probs=88.3
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC---------ccccceeechhhhhhhhhccccccc
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE---------RISKIKIVGNEEVERSLYGQFVLGK 229 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~---------~~fd~~v~s~~~~~~~~~~~~~~g~ 229 (323)
...++||+.++|+.|+++|++++|+||. .....++.+++.+++. ++|+.++. +++..
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~--~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~-~~~~~----------- 108 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWN--DVPEWAYEILGTFEITYAGKTVPMHSLFDDRIE-IYKPN----------- 108 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCC--CChHHHHHHHHhCCcCCCCCcccHHHhceeeee-ccCCc-----------
Confidence 4679999999999999999999999993 1568888999999998 99987543 33221
Q ss_pred ccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHc--CCCCCcEEEEcCChhhH
Q 020675 230 GISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYA--EKPVRNCFLIAGSQSGV 307 (323)
Q Consensus 230 ~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~l--gv~p~~~v~VGDs~~Di 307 (323)
..||+|.+ ++.+.+.+ |++|++|+||||+..|+
T Consensus 109 -------------------------------~~kp~~~i--------------~~~~~~~~~~gl~p~e~l~VgDs~~di 143 (174)
T TIGR01685 109 -------------------------------KAKQLEMI--------------LQKVNKVDPSVLKPAQILFFDDRTDNV 143 (174)
T ss_pred -------------------------------hHHHHHHH--------------HHHhhhcccCCCCHHHeEEEcChhHhH
Confidence 12677776 77777777 89999999999999999
Q ss_pred HHHHHcCCCEEEEcCC
Q 020675 308 AGAQRIGMPCVVMRSR 323 (323)
Q Consensus 308 ~aA~~aG~~~v~v~~g 323 (323)
++|+++|+.+|++.+|
T Consensus 144 ~aA~~aGi~~i~v~~g 159 (174)
T TIGR01685 144 REVWGYGVTSCYCPSG 159 (174)
T ss_pred HHHHHhCCEEEEcCCC
Confidence 9999999999999875
No 58
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.76 E-value=1.9e-17 Score=148.07 Aligned_cols=172 Identities=15% Similarity=0.190 Sum_probs=105.6
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHh-----HHHHHHHHHhc
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFN-----RKNALDEFLAS 157 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~i~~ 157 (323)
..++|+|||||||++.+.. . . ++++++.. .| +++...+..... .........+. ..+.+.+.+..
T Consensus 2 ~~~~vifDfDgTi~~~d~~-~-~----~~~~~~~~--~~-~~i~~~~~~g~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~ 71 (219)
T PRK09552 2 MSIQIFCDFDGTITNNDNI-I-A----IMKKFAPP--EW-EELKDDILSQEL-SIQEGVGQMFQLLPSNLKEEIIQFLLE 71 (219)
T ss_pred CCcEEEEcCCCCCCcchhh-H-H----HHHHhCHH--HH-HHHHHHHHhCCc-CHHHHHHHHHHhCCCCchHHHHHHHHh
Confidence 3458999999999999874 2 2 34444332 12 233332322111 11111111111 12334343333
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc--cccce-eechhhhhhhhhcccccccccccC
Q 020675 158 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--ISKIK-IVGNEEVERSLYGQFVLGKGISSG 234 (323)
Q Consensus 158 ~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~--~fd~~-v~s~~~~~~~~~~~~~~g~~v~~~ 234 (323)
..+++||+.++|+.|+++|++++|+|| +....++.+++.+ +.. ++... .+.++..
T Consensus 72 -~~~l~pG~~e~l~~l~~~g~~~~IvS~---~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~----------------- 129 (219)
T PRK09552 72 -TAEIREGFHEFVQFVKENNIPFYVVSG---GMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYI----------------- 129 (219)
T ss_pred -CCCcCcCHHHHHHHHHHcCCeEEEECC---CcHHHHHHHHHHh-CCcCcEEEeEEEecCCee-----------------
Confidence 377999999999999999999999999 6778999999987 643 22100 1111111
Q ss_pred cchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccC---CCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHH
Q 020675 235 VDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDT---SSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQ 311 (323)
Q Consensus 235 ~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~---~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~ 311 (323)
...||+|.... ..... ...++++++..+++|+||||+.+|+.+|+
T Consensus 130 -------------------------~~~kp~p~~~~~~~~~~~~-------K~~~l~~~~~~~~~~i~iGDs~~Di~aa~ 177 (219)
T PRK09552 130 -------------------------TITWPHPCDEHCQNHCGCC-------KPSLIRKLSDTNDFHIVIGDSITDLEAAK 177 (219)
T ss_pred -------------------------EEeccCCccccccccCCCc-------hHHHHHHhccCCCCEEEEeCCHHHHHHHH
Confidence 12388886510 00000 23577889999999999999999999999
Q ss_pred HcCCCEE
Q 020675 312 RIGMPCV 318 (323)
Q Consensus 312 ~aG~~~v 318 (323)
+||+.++
T Consensus 178 ~Ag~~~a 184 (219)
T PRK09552 178 QADKVFA 184 (219)
T ss_pred HCCccee
Confidence 9999543
No 59
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.75 E-value=1.7e-17 Score=149.91 Aligned_cols=148 Identities=8% Similarity=0.086 Sum_probs=104.8
Q ss_pred EEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhHHHHHHHHHhcCCCCCChh
Q 020675 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDAPLRPG 165 (323)
Q Consensus 86 aViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~pg 165 (323)
+|+||+||||+|+.+. . .+|.+. ++.+.+..+.+. ..+ +.|.+.. .....+.++
T Consensus 65 aViFDlDgTLlDSs~~-~---------~~G~~~--~s~~~~~~l~g~------~~w-------~~~~~~~-~~~s~p~~~ 118 (237)
T TIGR01672 65 AVSFDIDDTVLFSSPG-F---------WRGKKT--FSPGSEDYLKNQ------VFW-------EKVNNGW-DEFSIPKEV 118 (237)
T ss_pred EEEEeCCCccccCcHH-H---------hCCccc--CCHHHhhhhcCh------HHH-------HHHHHhc-ccCCcchhH
Confidence 9999999999999984 2 267763 445544433331 111 2232222 223457888
Q ss_pred HHHHHHHHHHCCCcEEEEcCCCCC-ChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHH
Q 020675 166 VEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEAR 244 (323)
Q Consensus 166 v~elL~~Lk~~Gi~l~ivTn~~~~-~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~ 244 (323)
+.++|+.|+++|++++++||...+ .+..++.+++.+|+..+|+.+ +++++...
T Consensus 119 a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i-~~~d~~~~------------------------- 172 (237)
T TIGR01672 119 ARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVI-FAGDKPGQ------------------------- 172 (237)
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEE-ECCCCCCC-------------------------
Confidence 999999999999999999995321 456888889899999999863 55433211
Q ss_pred HHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcCC
Q 020675 245 KAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 245 k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
.||+|. .+++++|+ ++||||+.+|+.+|+++|+++|.|.+|
T Consensus 173 -----------------~Kp~~~-----------------~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g 213 (237)
T TIGR01672 173 -----------------YQYTKT-----------------QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRA 213 (237)
T ss_pred -----------------CCCCHH-----------------HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEEEec
Confidence 145432 24566776 799999999999999999999999875
No 60
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.71 E-value=3.6e-17 Score=140.41 Aligned_cols=99 Identities=13% Similarity=0.179 Sum_probs=78.7
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCC---------hHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccc
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSG---------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~---------~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~ 232 (323)
++||+.++|+.|+++|++++|+||.+... ...+..+++.+|+.. +.+ +++++..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~i-i~~~~~~-------------- 105 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVL-AATHAGL-------------- 105 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEE-EecCCCC--------------
Confidence 68999999999999999999999943100 024677899999853 333 3332221
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcC--CCCCcEEEEcCCh------
Q 020675 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQ------ 304 (323)
Q Consensus 233 ~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lg--v~p~~~v~VGDs~------ 304 (323)
..||+|++ |+.+++++| +++++++||||+.
T Consensus 106 ----------------------------~~KP~p~~--------------~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~ 143 (166)
T TIGR01664 106 ----------------------------YRKPMTGM--------------WEYLQSQYNSPIKMTRSFYVGDAAGRKLDF 143 (166)
T ss_pred ----------------------------CCCCccHH--------------HHHHHHHcCCCCCchhcEEEECCCCCCCCC
Confidence 23999999 999999999 9999999999986
Q ss_pred --hhHHHHHHcCCCEEE
Q 020675 305 --SGVAGAQRIGMPCVV 319 (323)
Q Consensus 305 --~Di~aA~~aG~~~v~ 319 (323)
.|+++|+++|+.+++
T Consensus 144 ~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 144 SDADIKFAKNLGLEFKY 160 (166)
T ss_pred chhHHHHHHHCCCCcCC
Confidence 699999999999875
No 61
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.71 E-value=4.5e-17 Score=143.61 Aligned_cols=164 Identities=16% Similarity=0.109 Sum_probs=102.3
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCC----CHHHHHHHHcccCCcHHHHHHHHHhHHHHHHHHHhcCC
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANW----TAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKD 159 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 159 (323)
+|+|+|||||||++ +.|..+++++|++. .+ ....+...++. ....+.......+.+...+ ..
T Consensus 1 ~~~v~FD~DGTL~~-------~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~i~~~~--~~ 66 (205)
T PRK13582 1 MEIVCLDLEGVLVP-------EIWIAFAEKTGIPE-LRATTRDIPDYDVLMKQ----RLDILDEHGLGLADIQEVI--AT 66 (205)
T ss_pred CeEEEEeCCCCChh-------hHHHHHHHHcCChH-HHHHhcCCCCHHHHHHH----HHHHHHHcCCCHHHHHHHH--Hh
Confidence 57999999999993 24566777888752 00 00111111110 0000100000022233322 23
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhH
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
.+++||+.++|+.|+++ ++++|+|| +....++.+++++|+..+|...+...++... .|.
T Consensus 67 ~~~~pg~~e~L~~L~~~-~~~~IvS~---~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i-------~~~---------- 125 (205)
T PRK13582 67 LDPLPGAVEFLDWLRER-FQVVILSD---TFYEFAGPLMRQLGWPTLFCHSLEVDEDGMI-------TGY---------- 125 (205)
T ss_pred CCCCCCHHHHHHHHHhc-CCEEEEeC---CcHHHHHHHHHHcCCchhhcceEEECCCCeE-------ECc----------
Confidence 67899999999999999 99999999 6789999999999999888754333221100 000
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
.+|.|.. ...+++.++..+++|+||||+.+|+.+|+++|+.+.
T Consensus 126 ----------------------~~~~p~~--------------k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~ 168 (205)
T PRK13582 126 ----------------------DLRQPDG--------------KRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGIL 168 (205)
T ss_pred ----------------------cccccch--------------HHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEE
Confidence 0222222 234455666677899999999999999999998764
No 62
>PRK06769 hypothetical protein; Validated
Probab=99.69 E-value=7.4e-17 Score=139.38 Aligned_cols=108 Identities=15% Similarity=0.124 Sum_probs=83.8
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCC-----ChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccC
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKS-----GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSG 234 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~-----~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~ 234 (323)
+.++||+.++|+.|+++|++++|+||...- ........++.+|++.+|......+++..
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~---------------- 90 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCE---------------- 90 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCC----------------
Confidence 348999999999999999999999994210 00123444777887776543221222221
Q ss_pred cchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 020675 235 VDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (323)
Q Consensus 235 ~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG 314 (323)
..||+|++ |+.+++++|++|++|+||||+..|+.+|+++|
T Consensus 91 --------------------------~~KP~p~~--------------~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aG 130 (173)
T PRK06769 91 --------------------------CRKPSTGM--------------LLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVN 130 (173)
T ss_pred --------------------------CCCCCHHH--------------HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCC
Confidence 24999999 99999999999999999999999999999999
Q ss_pred CCEEEEcCC
Q 020675 315 MPCVVMRSR 323 (323)
Q Consensus 315 ~~~v~v~~g 323 (323)
|.+|+|.+|
T Consensus 131 i~~i~v~~g 139 (173)
T PRK06769 131 ATTILVRTG 139 (173)
T ss_pred CeEEEEecC
Confidence 999999874
No 63
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.67 E-value=1.1e-15 Score=132.46 Aligned_cols=175 Identities=17% Similarity=0.160 Sum_probs=102.1
Q ss_pred EEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHH-HHHHHHHhH----HHHHHHHHhcCCC
Q 020675 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDED-RMLVLFFNR----KNALDEFLASKDA 160 (323)
Q Consensus 86 aViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~i~~~~~ 160 (323)
+|+||+||||++.... ..+++.++.. .| ...+............ ......... .+.+.+.+. ..
T Consensus 3 ~iiFD~dgTL~~~~~~------~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 71 (188)
T TIGR01489 3 VVVSDFDGTITLNDSD------DWITDKFGPP--EA-NRLLDGVLSKTLSIKFMDRRMKGLLPSGLKEDEILEVLK--SA 71 (188)
T ss_pred EEEEeCCCcccCCCch------HHHHHhcCcc--hh-hHHHHHHhhcCCchHHHHHHHHHHhhcCCCHHHHHHHHH--hC
Confidence 7899999999998774 2344445432 12 2333332221101100 111111111 223444332 26
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHH
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~ 240 (323)
+++||+.++|+.|+++|++++|+|| +....++.+++.+|+..+|+.+ ++++....+ .+...+
T Consensus 72 ~l~~g~~~ll~~l~~~g~~~~i~S~---~~~~~~~~~l~~~~l~~~f~~i-~~~~~~~~~--------~g~~~~------ 133 (188)
T TIGR01489 72 PIDPGFKEFIAFIKEHGIDFIVISD---GNDFFIDPVLEGIGEKDVFIEI-YSNPASFDN--------DGRHIV------ 133 (188)
T ss_pred CCCccHHHHHHHHHHcCCcEEEEeC---CcHHHHHHHHHHcCChhheeEE-eccCceECC--------CCcEEE------
Confidence 8999999999999999999999999 6678899999999999999874 454332211 010000
Q ss_pred HHHHHHhhHHHHHHHHHHHhhcCCCc--c-ccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 241 TEARKAVSAQKQEIAEEVASMLKLSV--D-IDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 241 ~~~~k~~s~~~~~i~~~v~~~~KP~p--~-i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
-|.. . ...+....++.+ ++.+++.. +++++||||+.+|+.+|+++++-+
T Consensus 134 ----------------------~~~~~~~~~~~~~g~~K~~~---~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 134 ----------------------WPHHCHGCCSCPCGCCKGKV---IHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred ----------------------ecCCCCccCcCCCCCCHHHH---HHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence 0000 0 000001112222 45555543 899999999999999999997654
No 64
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.66 E-value=6.8e-16 Score=125.07 Aligned_cols=118 Identities=18% Similarity=0.161 Sum_probs=88.8
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
...++|++.++|+.|+++|++++++|| +....++..++.+|+..+++.++ +.+...... . .......
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~---~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~--~--~~~~~~~----- 88 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATN---KSRREVLELLEELGLDDYFDPVI-TSNGAAIYY--P--KEGLFLG----- 88 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeC---chHHHHHHHHHHcCCchhhhhee-ccchhhhhc--c--ccccccc-----
Confidence 367999999999999999999999999 66899999999999987777643 333221100 0 0000000
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
.......||.+.. +..+++.++..++++++|||+.+|+++|+++|+.++
T Consensus 89 -----------------~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 89 -----------------GGPFDIGKPNPDK--------------LLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred -----------------ccccccCCCCHHH--------------HHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCcee
Confidence 0001123788877 899999999999999999999999999999999998
Q ss_pred EE
Q 020675 319 VM 320 (323)
Q Consensus 319 ~v 320 (323)
+|
T Consensus 138 ~v 139 (139)
T cd01427 138 AV 139 (139)
T ss_pred eC
Confidence 75
No 65
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.64 E-value=3.3e-15 Score=133.23 Aligned_cols=116 Identities=17% Similarity=0.150 Sum_probs=78.4
Q ss_pred HHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccc-cc-eeechhhhhhhhhccccc
Q 020675 150 ALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS-KI-KIVGNEEVERSLYGQFVL 227 (323)
Q Consensus 150 ~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~f-d~-~v~s~~~~~~~~~~~~~~ 227 (323)
...+++.. ..+++||+.++|+.|+++|++++|+|+ +....++.+++.++....+ .. .++.++..
T Consensus 60 ~~~~~~~~-~~~l~pg~~e~l~~l~~~g~~~~IvS~---~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~---------- 125 (214)
T TIGR03333 60 EITSFVLE-TAEIREGFREFVAFINEHGIPFYVISG---GMDFFVYPLLEGIVEKDRIYCNEADFSNEYI---------- 125 (214)
T ss_pred HHHHHHHh-cCcccccHHHHHHHHHHCCCeEEEECC---CcHHHHHHHHHhhCCcccEEeceeEeeCCee----------
Confidence 44444333 478999999999999999999999999 6778899999887543322 11 11111111
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCC-CCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhh
Q 020675 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSG 306 (323)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~-~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~D 306 (323)
...||+|..+.. ..-... -..++++++..+++++||||+.+|
T Consensus 126 --------------------------------~~~~p~~~~~~~~~~cg~~-----K~~~l~~~~~~~~~~i~iGDg~~D 168 (214)
T TIGR03333 126 --------------------------------HIDWPHPCDGTCQNQCGCC-----KPSLIRKLSEPNDYHIVIGDSVTD 168 (214)
T ss_pred --------------------------------EEeCCCCCccccccCCCCC-----HHHHHHHHhhcCCcEEEEeCCHHH
Confidence 123788776210 000001 135567777788999999999999
Q ss_pred HHHHHHcCCC
Q 020675 307 VAGAQRIGMP 316 (323)
Q Consensus 307 i~aA~~aG~~ 316 (323)
+.+|+.||+.
T Consensus 169 ~~~a~~Ad~~ 178 (214)
T TIGR03333 169 VEAAKQSDLC 178 (214)
T ss_pred HHHHHhCCee
Confidence 9999999983
No 66
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.62 E-value=1.9e-14 Score=128.24 Aligned_cols=175 Identities=18% Similarity=0.232 Sum_probs=115.5
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHH---HHHHHHHhH-----HHHHHH
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDED---RMLVLFFNR-----KNALDE 153 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-----~~~~~~ 153 (323)
+..+.++|||||||++. ..+..+....|... .+.........+.. ......... .+...+
T Consensus 3 ~~~~L~vFD~D~TLi~~------~~~~~~~~~~g~~~------~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~ 70 (212)
T COG0560 3 RMKKLAVFDLDGTLINA------ELIDELARGAGVGE------EVLAITERAMRGELDFEESLRLRVALLKGLPVEVLEE 70 (212)
T ss_pred CccceEEEecccchhhH------HHHHHHHHHhCCHH------HHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHHHHH
Confidence 35679999999999993 33455555555541 11111111111111 111111100 233333
Q ss_pred HHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccccccccc
Q 020675 154 FLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISS 233 (323)
Q Consensus 154 ~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~ 233 (323)
..... .+++||+.++++.++++|++++|+|+ ++...++.+.+.+|++..+...+...+ +.|++.+.|..+..
T Consensus 71 ~~~~~-~~l~~ga~elv~~lk~~G~~v~iiSg---g~~~lv~~ia~~lg~d~~~an~l~~~d----G~ltG~v~g~~~~~ 142 (212)
T COG0560 71 VREEF-LRLTPGAEELVAALKAAGAKVVIISG---GFTFLVEPIAERLGIDYVVANELEIDD----GKLTGRVVGPICDG 142 (212)
T ss_pred HHHhc-CcCCccHHHHHHHHHHCCCEEEEEcC---ChHHHHHHHHHHhCCchheeeEEEEeC----CEEeceeeeeecCc
Confidence 33222 67999999999999999999999999 788999999999999988876543332 13444444433211
Q ss_pred CcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHc
Q 020675 234 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 313 (323)
Q Consensus 234 ~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~a 313 (323)
+.+. .+++..++.+|+++++++++|||.||+.+-+.+
T Consensus 143 ----------------------------------------~~K~---~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~a 179 (212)
T COG0560 143 ----------------------------------------EGKA---KALRELAAELGIPLEETVAYGDSANDLPMLEAA 179 (212)
T ss_pred ----------------------------------------chHH---HHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhC
Confidence 0111 126788999999999999999999999999999
Q ss_pred CCCEEE
Q 020675 314 GMPCVV 319 (323)
Q Consensus 314 G~~~v~ 319 (323)
|.+.+.
T Consensus 180 g~~ia~ 185 (212)
T COG0560 180 GLPIAV 185 (212)
T ss_pred CCCeEe
Confidence 998765
No 67
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.60 E-value=1.7e-14 Score=126.91 Aligned_cols=113 Identities=19% Similarity=0.250 Sum_probs=82.9
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhH
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
..++||+.++|+.++++|++++|+|+ +....++.+++.+|++.+|...+...++. .++ |
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~---s~~~~v~~~~~~lg~~~~~~~~l~~~~~g---~~~----------g----- 144 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSA---SLTILVKPLARILGIDNAIGTRLEESEDG---IYT----------G----- 144 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeC---CcHHHHHHHHHHcCCcceEecceEEcCCC---EEe----------C-----
Confidence 35899999999999999999999999 67899999999999998876533221111 111 1
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
|+.... ..++++.. .++.++++.++++++|++||||.+|+.+++.+|..++.
T Consensus 145 -----------------------~~~~~~--~~g~~K~~---~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v 196 (202)
T TIGR01490 145 -----------------------NIDGNN--CKGEGKVH---ALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVV 196 (202)
T ss_pred -----------------------CccCCC--CCChHHHH---HHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEe
Confidence 221100 01122222 26778889999999999999999999999999998876
Q ss_pred Ec
Q 020675 320 MR 321 (323)
Q Consensus 320 v~ 321 (323)
..
T Consensus 197 ~~ 198 (202)
T TIGR01490 197 NP 198 (202)
T ss_pred CC
Confidence 54
No 68
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.60 E-value=9.3e-15 Score=125.53 Aligned_cols=107 Identities=17% Similarity=0.233 Sum_probs=76.3
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
.++++||+.++|+.++++|++++|+|+ +....++.+++.+|+..+|...+...++.. ..|+. .
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~---~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~-------~~g~~--~----- 133 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSG---GFDFFVEPVAEKLGIDDVFANRLEFDDNGL-------LTGPI--E----- 133 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHcCCchheeeeEEECCCCE-------EeCcc--C-----
Confidence 366899999999999999999999999 678899999999999887765433321110 00100 0
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHc
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 313 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~a 313 (323)
.||.+ ....+... ++..++.+|++++++++|||+.+|+.+++.|
T Consensus 134 -----------------------~~~~~-----~~~~K~~~---l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 134 -----------------------GQVNP-----EGECKGKV---LKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred -----------------------CcccC-----CcchHHHH---HHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 01111 11222222 5677788899999999999999999999864
No 69
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.59 E-value=5.7e-15 Score=137.98 Aligned_cols=111 Identities=14% Similarity=0.065 Sum_probs=90.6
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc-cccceeechhhhhhhhhcccccccccccCcchh
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~-~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
..++||+.++|+.|+++|++++++|| ......+..++.+++.. +|+.+ ++.++... |- ..
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~---r~~~~~~~~l~~l~~~~~~f~~i-~~~~~~~~--~~-----~~-------- 246 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSG---RDGVCEEDTVEWLRQTDIWFDDL-IGRPPDMH--FQ-----RE-------- 246 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeC---CChhhHHHHHHHHHHcCCchhhh-hCCcchhh--hc-----cc--------
Confidence 45899999999999999999999999 56788899999999997 88864 44332110 00 00
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCC-CCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK-PVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv-~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
.+..||+|++ ++.++++++. .+++|++|||+.+|+++|+++||.+
T Consensus 247 --------------------~~~~kp~p~~--------------~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 247 --------------------QGDKRPDDVV--------------KEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred --------------------CCCCCCcHHH--------------HHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 0123999999 8999999998 6799999999999999999999999
Q ss_pred EEEcCC
Q 020675 318 VVMRSR 323 (323)
Q Consensus 318 v~v~~g 323 (323)
|+|.+|
T Consensus 293 i~v~~g 298 (300)
T PHA02530 293 WQVAPG 298 (300)
T ss_pred EEecCC
Confidence 999886
No 70
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.59 E-value=1.1e-14 Score=131.50 Aligned_cols=99 Identities=6% Similarity=0.118 Sum_probs=75.8
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCC-ChHHHHHHHHHcCC--CccccceeechhhhhhhhhcccccccccccCc
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKS-GDRIARSVVEKLGS--ERISKIKIVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~-~~~~~~~~l~~lgl--~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
...|+||++++|+.|+++|++++++||++.+ ....+..+++.+|+ +++|+.+ ++++..
T Consensus 112 ~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vi-l~gd~~------------------ 172 (237)
T PRK11009 112 FSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVI-FAGDKP------------------ 172 (237)
T ss_pred cCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEE-EcCCCC------------------
Confidence 3669999999999999999999999995421 24566667777999 8888754 443321
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
.||++.. +++++++ ++||||+.+|+.+|++||+
T Consensus 173 --------------------------~K~~K~~-----------------~l~~~~i----~I~IGDs~~Di~aA~~AGi 205 (237)
T PRK11009 173 --------------------------GQYTKTQ-----------------WLKKKNI----RIFYGDSDNDITAAREAGA 205 (237)
T ss_pred --------------------------CCCCHHH-----------------HHHhcCC----eEEEcCCHHHHHHHHHcCC
Confidence 1444322 3456665 8999999999999999999
Q ss_pred CEEEEcCC
Q 020675 316 PCVVMRSR 323 (323)
Q Consensus 316 ~~v~v~~g 323 (323)
++|.|.+|
T Consensus 206 ~~I~v~~G 213 (237)
T PRK11009 206 RGIRILRA 213 (237)
T ss_pred cEEEEecC
Confidence 99999875
No 71
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.59 E-value=3.7e-15 Score=122.51 Aligned_cols=89 Identities=8% Similarity=0.007 Sum_probs=73.7
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcC-------CCccccceeechhhhhhhhhccccccccccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-------SERISKIKIVGNEEVERSLYGQFVLGKGISS 233 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lg-------l~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~ 233 (323)
+++||+.++|+.|+++|++++|+||. +....+...++.++ +.++|+.++.+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~--~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~-------------------- 86 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYN--DDPHVAYELLKIFEDFGIIFPLAEYFDPLTIG-------------------- 86 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCC--CCHHHHHHHHHhccccccchhhHhhhhhhhhc--------------------
Confidence 48899999999999999999999994 15677888888888 67777753221
Q ss_pred CcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcC--CCCCcEEEEcCChhhHHHHH
Q 020675 234 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQSGVAGAQ 311 (323)
Q Consensus 234 ~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lg--v~p~~~v~VGDs~~Di~aA~ 311 (323)
..||+|++ |..+++++| +.|++|+||||+..|+...+
T Consensus 87 ---------------------------~~~pkp~~--------------~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~ 125 (128)
T TIGR01681 87 ---------------------------YWLPKSPR--------------LVEIALKLNGVLKPKSILFVDDRPDNNEEVD 125 (128)
T ss_pred ---------------------------CCCcHHHH--------------HHHHHHHhcCCCCcceEEEECCCHhHHHHHH
Confidence 12788888 999999999 99999999999999988765
Q ss_pred H
Q 020675 312 R 312 (323)
Q Consensus 312 ~ 312 (323)
+
T Consensus 126 ~ 126 (128)
T TIGR01681 126 Y 126 (128)
T ss_pred h
Confidence 4
No 72
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.59 E-value=8.9e-15 Score=139.19 Aligned_cols=104 Identities=14% Similarity=0.209 Sum_probs=83.2
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCC---CC---------ChHHHHHHHHHcCCCccccceeech----hhhhhhhhc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYG---KS---------GDRIARSVVEKLGSERISKIKIVGN----EEVERSLYG 223 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~---~~---------~~~~~~~~l~~lgl~~~fd~~v~s~----~~~~~~~~~ 223 (323)
..++||+.++|+.|+++|++++|+||.+ .+ ....+..+++.+|+. |+.++++. ++.
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~------ 100 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPEDNC------ 100 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCcccC------
Confidence 5689999999999999999999999941 00 133456677888884 55444432 111
Q ss_pred ccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 020675 224 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 303 (323)
Q Consensus 224 ~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs 303 (323)
+.+||+|++ +..+++.++++|++++||||+
T Consensus 101 ------------------------------------~~rKP~p~~--------------l~~a~~~l~v~~~~svmIGDs 130 (354)
T PRK05446 101 ------------------------------------SCRKPKTGL--------------VEEYLAEGAIDLANSYVIGDR 130 (354)
T ss_pred ------------------------------------CCCCCCHHH--------------HHHHHHHcCCCcccEEEEcCC
Confidence 235999999 899999999999999999999
Q ss_pred hhhHHHHHHcCCCEEEEc
Q 020675 304 QSGVAGAQRIGMPCVVMR 321 (323)
Q Consensus 304 ~~Di~aA~~aG~~~v~v~ 321 (323)
.+|+++|+++||++|+|.
T Consensus 131 ~sDi~aAk~aGi~~I~v~ 148 (354)
T PRK05446 131 ETDVQLAENMGIKGIRYA 148 (354)
T ss_pred HHHHHHHHHCCCeEEEEE
Confidence 999999999999999985
No 73
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.59 E-value=3.2e-14 Score=126.01 Aligned_cols=163 Identities=15% Similarity=0.127 Sum_probs=101.1
Q ss_pred eEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHH---HH---h-HHHHHHHHHhc
Q 020675 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVL---FF---N-RKNALDEFLAS 157 (323)
Q Consensus 85 kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~-~~~~~~~~i~~ 157 (323)
+.++|||||||++. .|.+...+.|+.. ... .. ............ .. + ..+.+.+.+.
T Consensus 2 ~la~FDlD~TLi~~-------~w~~~~~~~g~~~----~~~---~~-~~~~~~~~~~~~r~~ll~~~g~~~~~i~~~~~- 65 (203)
T TIGR02137 2 EIACLDLEGVLVPE-------IWIAFAEKTGIDA----LKA---TT-RDIPDYDVLMKQRLRILDEHGLKLGDIQEVIA- 65 (203)
T ss_pred eEEEEeCCcccHHH-------HHHHHHHHcCCcH----HHH---Hh-cCCcCHHHHHHHHHHHHHHCCCCHHHHHHHHH-
Confidence 46899999999964 3677777888641 111 11 110111111110 01 1 1234444443
Q ss_pred CCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcch
Q 020675 158 KDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 158 ~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~ 237 (323)
.++++||+.++|+.|+++| +++|+|+ +....+..+++.+|++.+|...+...++. . +.|...
T Consensus 66 -~i~l~pga~ell~~lk~~~-~~~IVS~---~~~~~~~~il~~lgi~~~~an~l~~~~~g---~----~tG~~~------ 127 (203)
T TIGR02137 66 -TLKPLEGAVEFVDWLRERF-QVVILSD---TFYEFSQPLMRQLGFPTLLCHKLEIDDSD---R----VVGYQL------ 127 (203)
T ss_pred -hCCCCccHHHHHHHHHhCC-eEEEEeC---ChHHHHHHHHHHcCCchhhceeeEEecCC---e----eECeee------
Confidence 3679999999999999975 9999999 67899999999999998887543322100 0 011100
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
..||++.. +...+++.|. ++++|||+.||+.+++.||+.+
T Consensus 128 -----------------------~~~~~K~~--------------~l~~l~~~~~---~~v~vGDs~nDl~ml~~Ag~~i 167 (203)
T TIGR02137 128 -----------------------RQKDPKRQ--------------SVIAFKSLYY---RVIAAGDSYNDTTMLSEAHAGI 167 (203)
T ss_pred -----------------------cCcchHHH--------------HHHHHHhhCC---CEEEEeCCHHHHHHHHhCCCCE
Confidence 00222222 2333355553 7999999999999999999998
Q ss_pred EEEc
Q 020675 318 VVMR 321 (323)
Q Consensus 318 v~v~ 321 (323)
++-.
T Consensus 168 a~~a 171 (203)
T TIGR02137 168 LFHA 171 (203)
T ss_pred EecC
Confidence 7643
No 74
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.57 E-value=5.1e-15 Score=125.52 Aligned_cols=83 Identities=13% Similarity=0.150 Sum_probs=72.3
Q ss_pred HHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHHHHhh
Q 020675 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (323)
Q Consensus 169 lL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s 248 (323)
+|+.|+++|++++|+|| .+...+...++.+|+..+|+..
T Consensus 36 ~i~~Lk~~G~~i~IvTn---~~~~~~~~~l~~~gi~~~~~~~-------------------------------------- 74 (154)
T TIGR01670 36 GIRCALKSGIEVAIITG---RKAKLVEDRCKTLGITHLYQGQ-------------------------------------- 74 (154)
T ss_pred HHHHHHHCCCEEEEEEC---CCCHHHHHHHHHcCCCEEEecc--------------------------------------
Confidence 78999999999999999 5668889999999998877531
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEc
Q 020675 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (323)
Q Consensus 249 ~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~ 321 (323)
||+|++ +..+++++|+++++|+||||+.+|+.+++++|+. +.+.
T Consensus 75 --------------~~k~~~--------------~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v~ 118 (154)
T TIGR01670 75 --------------SNKLIA--------------FSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS-VAVA 118 (154)
T ss_pred --------------cchHHH--------------HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-EecC
Confidence 566666 8999999999999999999999999999999997 5554
No 75
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.57 E-value=3.9e-15 Score=131.18 Aligned_cols=88 Identities=18% Similarity=0.271 Sum_probs=76.6
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc--cccceeechhhhhhhhhcccccccccccCcch
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--ISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~--~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~ 237 (323)
.+++|++.++|+.|+++|++++++|+ .....+..+.+.+|+.+ +|....
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TG---D~~~~a~~~~~~lgi~~~~v~a~~~-------------------------- 176 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTG---DNESTASAIAKQLGIFDSIVFARVI-------------------------- 176 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEES---SEHHHHHHHHHHTTSCSEEEEESHE--------------------------
T ss_pred CcchhhhhhhhhhhhccCcceeeeec---ccccccccccccccccccccccccc--------------------------
Confidence 46899999999999999999999998 67899999999999954 222110
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG 314 (323)
.||+|.+ |..+++.+++++++|+||||+.||+.|+++||
T Consensus 177 ------------------------~kP~~k~--------------~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 177 ------------------------GKPEPKI--------------FLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp ------------------------TTTHHHH--------------HHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred ------------------------ccccchh--------------HHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 1888887 89999999999999999999999999999997
No 76
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.56 E-value=1.5e-14 Score=124.72 Aligned_cols=96 Identities=15% Similarity=0.253 Sum_probs=81.0
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCC-hHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcch
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~-~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~ 237 (323)
...++||+.++|+.|+++|++++|+||. . ...+..+++.+|+..++.
T Consensus 41 ~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~---~~~~~~~~~~~~~gl~~~~~----------------------------- 88 (170)
T TIGR01668 41 HNEAYPALRDWIEELKAAGRKLLIVSNN---AGEQRAKAVEKALGIPVLPH----------------------------- 88 (170)
T ss_pred CCCcChhHHHHHHHHHHcCCEEEEEeCC---chHHHHHHHHHHcCCEEEcC-----------------------------
Confidence 3568999999999999999999999994 4 455666667776643211
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCC
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMP 316 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~ 316 (323)
..||+|++ |..+++++|+++++|+||||+. .|+.+|+++||.
T Consensus 89 -----------------------~~KP~p~~--------------~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 89 -----------------------AVKPPGCA--------------FRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred -----------------------CCCCChHH--------------HHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 12999999 9999999999999999999998 799999999999
Q ss_pred EEEEcCC
Q 020675 317 CVVMRSR 323 (323)
Q Consensus 317 ~v~v~~g 323 (323)
+|+|.+|
T Consensus 132 ~i~v~~g 138 (170)
T TIGR01668 132 TILVEPL 138 (170)
T ss_pred EEEEccC
Confidence 9999875
No 77
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.56 E-value=4.9e-15 Score=137.44 Aligned_cols=48 Identities=17% Similarity=0.119 Sum_probs=45.6
Q ss_pred cCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 262 LKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 262 ~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
.||+|.+ |+.+++++|++|++|+||||+. .||.+|+++||++|+|.||
T Consensus 201 gKP~p~~--------------~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G 249 (279)
T TIGR01452 201 GKPSPYM--------------FECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSG 249 (279)
T ss_pred CCCCHHH--------------HHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCC
Confidence 4999999 9999999999999999999995 8999999999999999886
No 78
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.55 E-value=1.2e-14 Score=124.99 Aligned_cols=82 Identities=16% Similarity=0.112 Sum_probs=73.2
Q ss_pred HHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHHHHhhH
Q 020675 170 VDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSA 249 (323)
Q Consensus 170 L~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~ 249 (323)
++.|+++|++++|+|| .....++..++.+|+..+|+..
T Consensus 43 ~~~L~~~Gi~laIiT~---k~~~~~~~~l~~lgi~~~f~~~--------------------------------------- 80 (169)
T TIGR02726 43 VIVLQLCGIDVAIITS---KKSGAVRHRAEELKIKRFHEGI--------------------------------------- 80 (169)
T ss_pred HHHHHHCCCEEEEEEC---CCcHHHHHHHHHCCCcEEEecC---------------------------------------
Confidence 5677888999999999 5679999999999999888731
Q ss_pred HHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEE
Q 020675 250 QKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 320 (323)
Q Consensus 250 ~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v 320 (323)
||+|++ |+.+++++|+++++|++|||+.+|+.+++.+|+..++-
T Consensus 81 -------------kpkp~~--------------~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~ 124 (169)
T TIGR02726 81 -------------KKKTEP--------------YAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG 124 (169)
T ss_pred -------------CCCHHH--------------HHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc
Confidence 778888 99999999999999999999999999999999987753
No 79
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.55 E-value=2.4e-14 Score=119.95 Aligned_cols=89 Identities=19% Similarity=0.336 Sum_probs=77.5
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHH
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEA 243 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~ 243 (323)
|.+++.+.+++++|+++.|+|| +.+..+....+++|+.-++..
T Consensus 49 pe~~~W~~e~k~~gi~v~vvSN---n~e~RV~~~~~~l~v~fi~~A---------------------------------- 91 (175)
T COG2179 49 PELRAWLAELKEAGIKVVVVSN---NKESRVARAAEKLGVPFIYRA---------------------------------- 91 (175)
T ss_pred HHHHHHHHHHHhcCCEEEEEeC---CCHHHHHhhhhhcCCceeecc----------------------------------
Confidence 4555667889999999999999 678889999999998753332
Q ss_pred HHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEEc
Q 020675 244 RKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMR 321 (323)
Q Consensus 244 ~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~ 321 (323)
.||.+.. |++|++++++++++|+||||.. .||.+|+.+||++|+|.
T Consensus 92 ------------------~KP~~~~--------------fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~ 138 (175)
T COG2179 92 ------------------KKPFGRA--------------FRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVE 138 (175)
T ss_pred ------------------cCccHHH--------------HHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEE
Confidence 3999988 9999999999999999999985 79999999999999985
No 80
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.51 E-value=2.1e-14 Score=131.70 Aligned_cols=105 Identities=14% Similarity=0.077 Sum_probs=78.2
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHH
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 241 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~ 241 (323)
.++++.+.++.|++.+++++++||.+ .......+..+|+..+|+.+. ....... +
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~---~~~~~~~~~~~g~g~~~~~i~-~~~~~~~-----------~---------- 175 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKG---RYYKRKDGLALDVGPFVTALE-YATDTKA-----------T---------- 175 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCC---CCCcCCCCCCCCchHHHHHHH-HHhCCCc-----------e----------
Confidence 36788889999998889999999943 333333444556666665421 1111000 0
Q ss_pred HHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEE
Q 020675 242 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVM 320 (323)
Q Consensus 242 ~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v~v 320 (323)
...||+|++ |+.+++++|++|++++||||+. +|+.+|+++||.+|+|
T Consensus 176 ------------------~~gKP~p~~--------------~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v 223 (257)
T TIGR01458 176 ------------------VVGKPSKTF--------------FLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQV 223 (257)
T ss_pred ------------------eecCCCHHH--------------HHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEE
Confidence 024999999 9999999999999999999996 8999999999999999
Q ss_pred cCC
Q 020675 321 RSR 323 (323)
Q Consensus 321 ~~g 323 (323)
.+|
T Consensus 224 ~~G 226 (257)
T TIGR01458 224 RTG 226 (257)
T ss_pred CCC
Confidence 875
No 81
>PLN02645 phosphoglycolate phosphatase
Probab=99.49 E-value=7.3e-13 Score=124.82 Aligned_cols=41 Identities=10% Similarity=-0.005 Sum_probs=39.2
Q ss_pred HHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
|+.+++++|+++++++||||+. +||.+|+++||++|+|.+|
T Consensus 236 ~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G 277 (311)
T PLN02645 236 MDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSG 277 (311)
T ss_pred HHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCC
Confidence 8999999999999999999997 8999999999999999876
No 82
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.48 E-value=5.7e-13 Score=121.66 Aligned_cols=49 Identities=8% Similarity=0.175 Sum_probs=45.1
Q ss_pred hcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
..||+|++ |+.+++++++++++++||||+. +||.+|+++||++++|.+|
T Consensus 176 ~gKP~~~~--------------~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G 225 (249)
T TIGR01457 176 IGKPNAII--------------MEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTG 225 (249)
T ss_pred cCCChHHH--------------HHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCC
Confidence 45888887 8999999999999999999996 7999999999999999876
No 83
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.48 E-value=5.2e-13 Score=122.36 Aligned_cols=49 Identities=16% Similarity=0.217 Sum_probs=45.2
Q ss_pred hcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
..||+|.| |+.+++.++..+++++||||+. +||.+|+++||.+++|.+|
T Consensus 188 ~GKP~~~i--------------~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TG 237 (269)
T COG0647 188 IGKPSPAI--------------YEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTG 237 (269)
T ss_pred cCCCCHHH--------------HHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccC
Confidence 56777777 9999999999999999999996 6999999999999999987
No 84
>PRK11590 hypothetical protein; Provisional
Probab=99.48 E-value=2.1e-12 Score=115.01 Aligned_cols=178 Identities=13% Similarity=0.059 Sum_probs=107.2
Q ss_pred CceEEEEecCCccccccccchHHHHHHHH-HHcCCCCCCCCHHHHHHHHcccCCcHHHH--------HHHHH-h------
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAF-QKLGLDCANWTAPIYTDLLRKSAGDEDRM--------LVLFF-N------ 146 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-~------ 146 (323)
..|+++||+||||++.. ...+|..++ +++|+.. .....+..+++.......+. ..... .
T Consensus 5 ~~k~~iFD~DGTL~~~d---~~~~~~~~~~~~~g~~~--~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~ 79 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQD---MFGSFLRYLLRRQPLNL--LLVLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGHSEARL 79 (211)
T ss_pred cceEEEEecCCCCcccc---hHHHHHHHHHHhcchhh--HHHhHHHHHhccCcccchhhhhhhHHHHHHHHHcCCCHHHH
Confidence 45799999999999544 457777777 7888652 22233333344322211110 00000 0
Q ss_pred --HHHHHHHHHhcCCCCCChhHHHHH-HHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhc
Q 020675 147 --RKNALDEFLASKDAPLRPGVEDFV-DDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYG 223 (323)
Q Consensus 147 --~~~~~~~~i~~~~~~l~pgv~elL-~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~ 223 (323)
..+.|.+..... ..++||+.++| +.++++|++++|+|| ++...++.+++.+|+.. .+. +++.+ ... .|+
T Consensus 80 ~~~~~~f~~~~~~~-~~~~pga~e~L~~~l~~~G~~l~IvSa---s~~~~~~~il~~l~~~~-~~~-~i~t~-l~~-~~t 151 (211)
T PRK11590 80 QALEADFVRWFRDN-VTAFPVVQERLTTYLLSSDADVWLITG---SPQPLVEQVYFDTPWLP-RVN-LIASQ-MQR-RYG 151 (211)
T ss_pred HHHHHHHHHHHHHh-CcCCccHHHHHHHHHHhCCCEEEEEeC---CcHHHHHHHHHHccccc-cCc-eEEEE-EEE-EEc
Confidence 012233322222 56799999999 578889999999999 67899999999999633 222 23332 111 233
Q ss_pred ccccccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 020675 224 QFVLGKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS 303 (323)
Q Consensus 224 ~~~~g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs 303 (323)
+.+.|. ++. ..+| ...+.+.+|.+...+.+.|||
T Consensus 152 g~~~g~------~c~------------------------------------g~~K----~~~l~~~~~~~~~~~~aY~Ds 185 (211)
T PRK11590 152 GWVLTL------RCL------------------------------------GHEK----VAQLERKIGTPLRLYSGYSDS 185 (211)
T ss_pred cEECCc------cCC------------------------------------ChHH----HHHHHHHhCCCcceEEEecCC
Confidence 333221 111 1112 233445557777889999999
Q ss_pred hhhHHHHHHcCCCEEE
Q 020675 304 QSGVAGAQRIGMPCVV 319 (323)
Q Consensus 304 ~~Di~aA~~aG~~~v~ 319 (323)
.+|+.+...+|-+.+.
T Consensus 186 ~~D~pmL~~a~~~~~v 201 (211)
T PRK11590 186 KQDNPLLYFCQHRWRV 201 (211)
T ss_pred cccHHHHHhCCCCEEE
Confidence 9999999999988664
No 85
>PRK10444 UMP phosphatase; Provisional
Probab=99.38 E-value=1e-11 Score=113.31 Aligned_cols=49 Identities=14% Similarity=0.186 Sum_probs=46.0
Q ss_pred hcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
..||+|++ |+.+++++++++++|+||||+. +|+.+|+++|+.+++|.+|
T Consensus 172 ~gKP~~~~--------------~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G 221 (248)
T PRK10444 172 VGKPSPWI--------------IRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSG 221 (248)
T ss_pred cCCCCHHH--------------HHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCC
Confidence 35999999 9999999999999999999996 8999999999999999886
No 86
>PRK08238 hypothetical protein; Validated
Probab=99.36 E-value=1.5e-11 Score=121.83 Aligned_cols=157 Identities=18% Similarity=0.175 Sum_probs=99.4
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhHHHHHHHHHhcCCCCCC
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDAPLR 163 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~ 163 (323)
.+.++||+||||+.++.. .+.+...+++.-. ..+.-..-.. .+......... .. ..+....++++
T Consensus 10 ~~pl~~DlDgTLi~td~l--~e~~~~~l~~~p~-------~~~~l~~~~~-~g~a~lK~~~a----~~-~~~d~~~lp~~ 74 (479)
T PRK08238 10 DLPLVVDLDGTLIRTDLL--HESIFALLRRNPL-------ALLRLPLWLL-RGKAALKRRLA----RR-VDLDVATLPYN 74 (479)
T ss_pred CCCEEEeCCCCccccchH--HHHHHHHHHhChH-------HHHHHHHHHH-hcHHHHHHHHH----hh-cCCChhhCCCC
Confidence 347999999999999874 4555555543211 1111100000 11111111110 00 01223346788
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHH
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEA 243 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~ 243 (323)
||+.++|++++++|++++++|+ +.+..++.+++++|+ |+.+ +++++..+
T Consensus 75 pga~e~L~~lk~~G~~v~LaTa---s~~~~a~~i~~~lGl---Fd~V-igsd~~~~------------------------ 123 (479)
T PRK08238 75 EEVLDYLRAERAAGRKLVLATA---SDERLAQAVAAHLGL---FDGV-FASDGTTN------------------------ 123 (479)
T ss_pred hhHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCC---CCEE-EeCCCccc------------------------
Confidence 9999999999999999999999 677999999999997 6654 55544322
Q ss_pred HHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 244 RKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 244 ~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
.||++.. +.+.+.++ .++++++||+.+|+.+++.+| +.+.|..
T Consensus 124 ------------------~kg~~K~---------------~~l~~~l~--~~~~~yvGDS~~Dlp~~~~A~-~av~Vn~ 166 (479)
T PRK08238 124 ------------------LKGAAKA---------------AALVEAFG--ERGFDYAGNSAADLPVWAAAR-RAIVVGA 166 (479)
T ss_pred ------------------cCCchHH---------------HHHHHHhC--ccCeeEecCCHHHHHHHHhCC-CeEEECC
Confidence 1444433 23345565 366899999999999999999 6666653
No 87
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.34 E-value=3.3e-12 Score=127.29 Aligned_cols=96 Identities=16% Similarity=0.208 Sum_probs=75.6
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCC---------ChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccc
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKS---------GDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGIS 232 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~---------~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~ 232 (323)
++||+.+.|+.|+++|++++|+||.+.- ....+..+++.+|+. |+.+ ++.++.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdvi-ia~~~~--------------- 259 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVF-IAIGAG--------------- 259 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEE-EeCCCC---------------
Confidence 6899999999999999999999995320 013477888899985 6653 443322
Q ss_pred cCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcC----CCCCcEEEEcCChhhHH
Q 020675 233 SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE----KPVRNCFLIAGSQSGVA 308 (323)
Q Consensus 233 ~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lg----v~p~~~v~VGDs~~Di~ 308 (323)
.++||+|.+ +..++++++ +++++++||||+..|++
T Consensus 260 ---------------------------~~RKP~pGm--------------~~~a~~~~~~~~~Id~~~S~~VGDaagr~~ 298 (526)
T TIGR01663 260 ---------------------------FYRKPLTGM--------------WDHLKEEANDGTEIQEDDCFFVGDAAGRPA 298 (526)
T ss_pred ---------------------------CCCCCCHHH--------------HHHHHHhcCcccCCCHHHeEEeCCcccchH
Confidence 135999999 999999985 89999999999999998
Q ss_pred HHHHcCCC
Q 020675 309 GAQRIGMP 316 (323)
Q Consensus 309 aA~~aG~~ 316 (323)
+|+++|-.
T Consensus 299 ~g~~ag~~ 306 (526)
T TIGR01663 299 NGKAAGKK 306 (526)
T ss_pred HHHhcCCC
Confidence 88877753
No 88
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.33 E-value=6.5e-12 Score=118.82 Aligned_cols=90 Identities=12% Similarity=0.100 Sum_probs=79.4
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH----cCCCccccceeechhhhhhhhhcccccccccccCcch
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK----LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~----lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~ 237 (323)
++||+.++|+.|+++|+.++|+|+ +....+..+++. +++.++|+.+..+
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~---n~~~~a~~~l~~~~~~~~~~~~f~~~~~~------------------------ 84 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASK---NDEDDAKKVFERRKDFILQAEDFDARSIN------------------------ 84 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHhCccccCcHHHeeEEEEe------------------------
Confidence 588999999999999999999999 677889999999 8999889864221
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCC
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 316 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~ 316 (323)
.||+|+. +..+++++|+.+++++||||+..|+.++++++-.
T Consensus 85 ------------------------~~pk~~~--------------i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 85 ------------------------WGPKSES--------------LRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred ------------------------cCchHHH--------------HHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 2888888 9999999999999999999999999999997653
No 89
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.33 E-value=1.3e-12 Score=110.01 Aligned_cols=94 Identities=21% Similarity=0.211 Sum_probs=78.6
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcc-ccceeechhhhhhhhhcccccccccccCcchh
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI-SKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~-fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
+.++||+.++|+.|+ ++++++|+|+ +....++.+++.+++..+ |+. +++.++...
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts---~~~~~~~~il~~l~~~~~~f~~-i~~~~d~~~------------------- 99 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTA---GLRMYADPVLDLLDPKKYFGYR-RLFRDECVF------------------- 99 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeC---CcHHHHHHHHHHhCcCCCEeee-EEECccccc-------------------
Confidence 568999999999998 5799999999 567899999999999654 465 466555533
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
.||+ + .++++++|++|++||+|||+..|+.+|+++|+.+
T Consensus 100 -----------------------~KP~--~---------------~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 100 -----------------------VKGK--Y---------------VKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred -----------------------cCCe--E---------------eecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence 2775 3 5778999999999999999999999999999865
No 90
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.31 E-value=2.5e-11 Score=104.13 Aligned_cols=114 Identities=17% Similarity=0.320 Sum_probs=77.6
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhH-------HHHHHHHH
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNR-------KNALDEFL 155 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~i 155 (323)
..++|+||||.|++..+.. .++....|+. +.........+++...+......+ .....+++
T Consensus 15 ~~~aVcFDvDSTvi~eEgI------delA~~~G~~------~~Va~~T~rAMng~~~F~eaL~~Rl~llqp~~~qv~~~v 82 (227)
T KOG1615|consen 15 SADAVCFDVDSTVIQEEGI------DELAAYCGVG------EAVAEVTRRAMNGEADFQEALAARLSLLQPLQVQVEQFV 82 (227)
T ss_pred hcCeEEEecCcchhHHhhH------HHHHHHhCch------HHHHHHHHHHhCCCCcHHHHHHHHHHHhcccHHHHHHHH
Confidence 3569999999999987664 4444445553 233333333444433332222111 33444455
Q ss_pred hcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc--ccccee
Q 020675 156 ASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER--ISKIKI 211 (323)
Q Consensus 156 ~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~--~fd~~v 211 (323)
......+.||++|++..|+++|..++++|+ ++...+..+.+.||++. .|...+
T Consensus 83 ~~~k~~lT~Gi~eLv~~L~~~~~~v~liSG---GF~~~i~~Va~~Lgi~~~n~yAN~l 137 (227)
T KOG1615|consen 83 IKQKPTLTPGIRELVSRLHARGTQVYLISG---GFRQLIEPVAEQLGIPKSNIYANEL 137 (227)
T ss_pred hcCCCccCCCHHHHHHHHHHcCCeEEEEcC---ChHHHHHHHHHHhCCcHhhhhhhee
Confidence 555678999999999999999999999999 89999999999999986 554443
No 91
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=99.30 E-value=5e-11 Score=108.00 Aligned_cols=41 Identities=12% Similarity=0.271 Sum_probs=38.9
Q ss_pred HHHHHHHcCCCCCcE-EEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 283 LRAGAEYAEKPVRNC-FLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 283 ~~~al~~lgv~p~~~-v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
|+.++++++++++++ +||||+. +||.+|+++||++|+|.+|
T Consensus 194 ~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 194 YRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred HHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 899999999999987 9999998 7999999999999999986
No 92
>PTZ00445 p36-lilke protein; Provisional
Probab=99.30 E-value=1.6e-11 Score=107.47 Aligned_cols=51 Identities=8% Similarity=-0.046 Sum_probs=46.5
Q ss_pred hhcCCCccc--cCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 260 SMLKLSVDI--DTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 260 ~~~KP~p~i--~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
++.||+|++ |. ++.+++++|+.|++|+||+|...++++|++.||.++.+.+
T Consensus 154 gl~KPdp~iK~yH------------le~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~ 206 (219)
T PTZ00445 154 GLDAPMPLDKSYH------------LKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTG 206 (219)
T ss_pred cccCCCccchHHH------------HHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCC
Confidence 567999999 33 4999999999999999999999999999999999999875
No 93
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.25 E-value=9.3e-11 Score=107.91 Aligned_cols=121 Identities=24% Similarity=0.277 Sum_probs=86.8
Q ss_pred HHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhccccc
Q 020675 148 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (323)
Q Consensus 148 ~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~ 227 (323)
.+...+.+....+.++||+.++++.|+++|++++|+|+ +....++.+++.+|+...+.. ++++.-.. .
T Consensus 108 ~e~i~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~---G~~~~Ie~vL~~lgl~~~~~~-IvSN~L~f--------~ 175 (277)
T TIGR01544 108 KAKIKEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSA---GIGNVLEEVLRQAGVYHPNVK-VVSNFMDF--------D 175 (277)
T ss_pred HHHHHHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeC---CcHHHHHHHHHHcCCCCcCce-EEeeeEEE--------C
Confidence 44555555555789999999999999999999999999 778999999999998765543 33332110 1
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcC--CCCCcEEEEcCChh
Q 020675 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE--KPVRNCFLIAGSQS 305 (323)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lg--v~p~~~v~VGDs~~ 305 (323)
.+++..| ||.|-+.. -.+...+ ++.++++++ +++++||+||||.+
T Consensus 176 ~dGvltG----------------------------~~~P~i~~---~~K~~~v--~~~~~~~~~~~~~~~~vI~vGDs~~ 222 (277)
T TIGR01544 176 EDGVLKG----------------------------FKGPLIHT---FNKNHDV--ALRNTEYFNQLKDRSNIILLGDSQG 222 (277)
T ss_pred CCCeEeC----------------------------CCCCcccc---cccHHHH--HHHHHHHhCccCCcceEEEECcChh
Confidence 1222222 66664421 1222222 667888998 89999999999999
Q ss_pred hHHHHHHc
Q 020675 306 GVAGAQRI 313 (323)
Q Consensus 306 Di~aA~~a 313 (323)
|+.||..+
T Consensus 223 Dl~ma~g~ 230 (277)
T TIGR01544 223 DLRMADGV 230 (277)
T ss_pred hhhHhcCC
Confidence 99998766
No 94
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=99.24 E-value=2.3e-11 Score=104.28 Aligned_cols=101 Identities=14% Similarity=0.247 Sum_probs=70.2
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC----------ccccceeechhhhhhhhhcccccc
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE----------RISKIKIVGNEEVERSLYGQFVLG 228 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~----------~~fd~~v~s~~~~~~~~~~~~~~g 228 (323)
.+.++|++.++|+.|+++|++++++|-+ .....++.+|+.+++. ++|+..-+....
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt--~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~gs------------ 108 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRT--DEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYPGS------------ 108 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE----S-HHHHHHHHHHTT-C----------CCECEEEESSS-------------
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECC--CChHHHHHHHHhcCCCccccccccchhhcchhheecCc------------
Confidence 4779999999999999999999999953 3468999999999999 666653222110
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHH
Q 020675 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 308 (323)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~ 308 (323)
+.+ -|+.+.+..|++.++++||+|-..++.
T Consensus 109 -----------------------------------------------K~~---Hf~~i~~~tgI~y~eMlFFDDe~~N~~ 138 (169)
T PF12689_consen 109 -----------------------------------------------KTT---HFRRIHRKTGIPYEEMLFFDDESRNIE 138 (169)
T ss_dssp -----------------------------------------------HHH---HHHHHHHHH---GGGEEEEES-HHHHH
T ss_pred -----------------------------------------------hHH---HHHHHHHhcCCChhHEEEecCchhcce
Confidence 000 188889999999999999999999999
Q ss_pred HHHHcCCCEEEEcCC
Q 020675 309 GAQRIGMPCVVMRSR 323 (323)
Q Consensus 309 aA~~aG~~~v~v~~g 323 (323)
...+.|+.+|.|.+|
T Consensus 139 ~v~~lGV~~v~v~~G 153 (169)
T PF12689_consen 139 VVSKLGVTCVLVPDG 153 (169)
T ss_dssp HHHTTT-EEEE-SSS
T ss_pred eeEecCcEEEEeCCC
Confidence 999999999999876
No 95
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=99.18 E-value=5.1e-10 Score=100.87 Aligned_cols=179 Identities=17% Similarity=0.242 Sum_probs=104.6
Q ss_pred EEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcH----HHHHHHHHhH---HHHHHHHHhcC
Q 020675 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE----DRMLVLFFNR---KNALDEFLASK 158 (323)
Q Consensus 86 aViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~---~~~~~~~i~~~ 158 (323)
.|+||||+||+|.... ..+++.++.. .+..+. ...... +.. .+++..+... .+...+.+ .
T Consensus 2 LvvfDFD~TIvd~dsd------~~v~~~l~~~--~~~~~l-~~~~~~--~~wt~~m~~vl~~L~~~gvt~~~I~~~l--~ 68 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSD------DWVIELLPPE--ELPEEL-RESYPK--GGWTEYMDRVLQLLHEQGVTPEDIRDAL--R 68 (234)
T ss_pred EEEEeCCCCccCCccH------HHHHHhcCCc--ccHHHH-HHhccc--cchHHHHHHHHHHHHHcCCCHHHHHHHH--H
Confidence 5899999999998875 3445555554 132222 222221 111 1222222111 23344433 3
Q ss_pred CCCCChhHHHHHHHH--HHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcc
Q 020675 159 DAPLRPGVEDFVDDA--YNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 236 (323)
Q Consensus 159 ~~~l~pgv~elL~~L--k~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~ 236 (323)
.+++.||+.++++.+ ++.|+.+.|+|+ ++...++.+|+..|+...|+.+ +++...... .|.-.. .
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSD---aNs~fI~~iL~~~gl~~~f~~I-~TNpa~~~~------~G~l~v---~ 135 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISD---ANSFFIETILEHHGLRDCFSEI-FTNPACFDA------DGRLRV---R 135 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeC---CcHhHHHHHHHhCCCccccceE-EeCCceecC------CceEEE---e
Confidence 588999999999999 457999999999 7889999999999999999874 444211100 000000 0
Q ss_pred hhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCc--hhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 020675 237 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPE--SLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (323)
Q Consensus 237 ~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~--~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG 314 (323)
|+ -++ .. ...|. =+-+++..|..-..+-|+..++++||||+.+|+-.+.+.+
T Consensus 136 py------------------------h~h-~C-~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~ 189 (234)
T PF06888_consen 136 PY------------------------HSH-GC-SLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLR 189 (234)
T ss_pred Cc------------------------cCC-CC-CcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccC
Confidence 00 000 00 00011 1233333233333335788999999999999999988766
Q ss_pred CC
Q 020675 315 MP 316 (323)
Q Consensus 315 ~~ 316 (323)
-.
T Consensus 190 ~~ 191 (234)
T PF06888_consen 190 PR 191 (234)
T ss_pred CC
Confidence 53
No 96
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.17 E-value=2.2e-11 Score=90.59 Aligned_cols=49 Identities=14% Similarity=0.259 Sum_probs=46.7
Q ss_pred hcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC-hhhHHHHHHcCCCEEEEcCC
Q 020675 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs-~~Di~aA~~aG~~~v~v~~g 323 (323)
++||+|.+ |+.+++++++++++++||||+ ..||.+|+++||.+|+|.+|
T Consensus 2 ~gKP~p~~--------------~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG 51 (75)
T PF13242_consen 2 CGKPSPGM--------------LEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTG 51 (75)
T ss_dssp CSTTSHHH--------------HHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSS
T ss_pred CCCCcHHH--------------HHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCC
Confidence 46999999 999999999999999999999 89999999999999999986
No 97
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.16 E-value=1.7e-10 Score=105.92 Aligned_cols=37 Identities=11% Similarity=0.130 Sum_probs=34.1
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++++++++|||+.||+.|++.+|+.+++
T Consensus 204 l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vam 240 (272)
T PRK10530 204 LTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAM 240 (272)
T ss_pred HHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEe
Confidence 7889999999999999999999999999999986543
No 98
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.10 E-value=5.3e-10 Score=96.53 Aligned_cols=110 Identities=14% Similarity=0.157 Sum_probs=79.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCC------------hHHHHHHHHHcCCCccccceeechhhhhhhhhccccc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSG------------DRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVL 227 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~------------~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~ 227 (323)
+.+.||+.+.+..|++.|++++|+||.+.=. .......++..|. -|+.+.++.
T Consensus 30 ~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id~i~~Cp------------- 94 (181)
T COG0241 30 FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KIDGILYCP------------- 94 (181)
T ss_pred hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccceEEECC-------------
Confidence 3478899999999999999999999943100 0222233333343 233332221
Q ss_pred ccccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhH
Q 020675 228 GKGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGV 307 (323)
Q Consensus 228 g~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di 307 (323)
|.. +..+.++||.|.+ ++.+++++++++++.++|||...|+
T Consensus 95 --------h~p-----------------~~~c~cRKP~~gm--------------~~~~~~~~~iD~~~s~~VGD~~~Dl 135 (181)
T COG0241 95 --------HHP-----------------EDNCDCRKPKPGM--------------LLSALKEYNIDLSRSYVVGDRLTDL 135 (181)
T ss_pred --------CCC-----------------CCCCcccCCChHH--------------HHHHHHHhCCCccceEEecCcHHHH
Confidence 110 0013578999999 9999999999999999999999999
Q ss_pred HHHHHcCCCEEEEcCC
Q 020675 308 AGAQRIGMPCVVMRSR 323 (323)
Q Consensus 308 ~aA~~aG~~~v~v~~g 323 (323)
++|.++|++.+.+.++
T Consensus 136 q~a~n~gi~~~~~~~~ 151 (181)
T COG0241 136 QAAENAGIKGVLVLTG 151 (181)
T ss_pred HHHHHCCCCceEEEcC
Confidence 9999999998887654
No 99
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.10 E-value=5.2e-11 Score=108.16 Aligned_cols=100 Identities=12% Similarity=0.195 Sum_probs=74.2
Q ss_pred ChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccccee-echhhhhhhhhcccccccccccCcchhHHH
Q 020675 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI-VGNEEVERSLYGQFVLGKGISSGVDEQLAT 241 (323)
Q Consensus 163 ~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v-~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~ 241 (323)
++++.++++.|+++|+++ |+||. ........+..++...+|..+. ++.+..
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~---d~~~~~~~~~~~~~g~~~~~i~~~g~~~~------------------------ 191 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANP---DRGINQHGIYRYGAGYYAELIKQLGGKVI------------------------ 191 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECC---CEeccCCCceEecccHHHHHHHHhCCcEe------------------------
Confidence 689999999998899997 88994 3344444445555555554310 111110
Q ss_pred HHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCC-CCcEEEEcCC-hhhHHHHHHcCCCEEE
Q 020675 242 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKP-VRNCFLIAGS-QSGVAGAQRIGMPCVV 319 (323)
Q Consensus 242 ~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~-p~~~v~VGDs-~~Di~aA~~aG~~~v~ 319 (323)
...||+|++ |+.+++++|+. +++|+||||+ .+||.+|+++||.+++
T Consensus 192 ------------------~~gKP~~~~--------------~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~ 239 (242)
T TIGR01459 192 ------------------YSGKPYPAI--------------FHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTAL 239 (242)
T ss_pred ------------------cCCCCCHHH--------------HHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEE
Confidence 134999999 99999999975 6799999999 5999999999999999
Q ss_pred EcC
Q 020675 320 MRS 322 (323)
Q Consensus 320 v~~ 322 (323)
|.+
T Consensus 240 v~t 242 (242)
T TIGR01459 240 VLT 242 (242)
T ss_pred EeC
Confidence 975
No 100
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=99.09 E-value=9.6e-10 Score=101.01 Aligned_cols=51 Identities=14% Similarity=0.268 Sum_probs=41.4
Q ss_pred cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccc
Q 020675 157 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 207 (323)
Q Consensus 157 ~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~f 207 (323)
....+++||+.++|+.|+++|++++++||........+...++++|+...+
T Consensus 114 ~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~ 164 (266)
T TIGR01533 114 AAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQAD 164 (266)
T ss_pred cCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCC
Confidence 345779999999999999999999999996543345566788899997654
No 101
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.07 E-value=3.3e-10 Score=98.71 Aligned_cols=81 Identities=10% Similarity=0.108 Sum_probs=67.7
Q ss_pred HHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHHHHhh
Q 020675 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVS 248 (323)
Q Consensus 169 lL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s 248 (323)
.++.|+++|++++|+|| .....+..+++.+|+..+|+. .
T Consensus 56 ~i~~L~~~Gi~v~I~T~---~~~~~v~~~l~~lgl~~~f~g----~---------------------------------- 94 (183)
T PRK09484 56 GIRCLLTSGIEVAIITG---RKSKLVEDRMTTLGITHLYQG----Q---------------------------------- 94 (183)
T ss_pred HHHHHHHCCCEEEEEeC---CCcHHHHHHHHHcCCceeecC----C----------------------------------
Confidence 45667789999999999 567888999999999877652 1
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 249 AQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 249 ~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
++.++. ++.+++++|+++++|+||||+.+|+.+|+++|+.++
T Consensus 95 --------------~~k~~~--------------l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~ 136 (183)
T PRK09484 95 --------------SNKLIA--------------FSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA 136 (183)
T ss_pred --------------CcHHHH--------------HHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe
Confidence 222333 899999999999999999999999999999999854
No 102
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.07 E-value=4.2e-09 Score=93.80 Aligned_cols=106 Identities=11% Similarity=0.011 Sum_probs=70.4
Q ss_pred CCCChhHHHHHH-HHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechh-hhhhhhhcccccccccccCcch
Q 020675 160 APLRPGVEDFVD-DAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE-EVERSLYGQFVLGKGISSGVDE 237 (323)
Q Consensus 160 ~~l~pgv~elL~-~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~-~~~~~~~~~~~~g~~v~~~~~~ 237 (323)
..++||+.+.|+ .++++|++++|+|| +++..++.+.+..++....+ +++.+ ++.. | +...|.++
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSa---s~~~~~~~ia~~~~~~~~~~--~i~t~le~~~--------g-g~~~g~~c 158 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITG---SPQPLVEAVYFDSNFIHRLN--LIASQIERGN--------G-GWVLPLRC 158 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcC---CcHHHHHHHHHhccccccCc--EEEEEeEEeC--------C-ceEcCccC
Confidence 358999999996 78889999999999 67888999998866643222 23332 1111 1 11122222
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 238 QLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 238 ~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
. ..+| ...+.+.+|.+.+.+.+.|||.+|+.+...+|-+.
T Consensus 159 ~------------------------------------g~~K----v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~ 198 (210)
T TIGR01545 159 L------------------------------------GHEK----VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRW 198 (210)
T ss_pred C------------------------------------ChHH----HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcE
Confidence 1 1112 12333445656678899999999999999999886
Q ss_pred EE
Q 020675 318 VV 319 (323)
Q Consensus 318 v~ 319 (323)
+.
T Consensus 199 ~V 200 (210)
T TIGR01545 199 RV 200 (210)
T ss_pred EE
Confidence 64
No 103
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=99.02 E-value=9.6e-10 Score=95.40 Aligned_cols=49 Identities=18% Similarity=0.219 Sum_probs=45.9
Q ss_pred hcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChh-hHHHHHHcCCCEEEEcCC
Q 020675 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS-GVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~-Di~aA~~aG~~~v~v~~g 323 (323)
..||+|.. |+.+++.+|++|+++|||||..+ |+-+|+++||+.|.|.+|
T Consensus 179 vGKP~~~f--------------Fe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTG 228 (262)
T KOG3040|consen 179 VGKPSPFF--------------FESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTG 228 (262)
T ss_pred ecCCCHHH--------------HHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeecc
Confidence 67899888 99999999999999999999875 899999999999999986
No 104
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=99.02 E-value=6.7e-10 Score=94.69 Aligned_cols=98 Identities=14% Similarity=0.235 Sum_probs=65.4
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCCh-----------HHHHHHHHHcCCCccccceeechhhhhhhhhcccccccc
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGD-----------RIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKG 230 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~-----------~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~ 230 (323)
+.|++.+.|+.|.+.||.++|+||.+.-.. ..+..+++.+++.- .. +++....
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip~--~~-~~a~~~d------------- 93 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIPI--QV-YAAPHKD------------- 93 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS-E--EE-EECGCSS-------------
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCce--EE-EecCCCC-------------
Confidence 445899999999999999999999642111 33445566666651 11 1221110
Q ss_pred cccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCC----CCCcEEEEcCC---
Q 020675 231 ISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEK----PVRNCFLIAGS--- 303 (323)
Q Consensus 231 v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv----~p~~~v~VGDs--- 303 (323)
.++||.|.| ++.+++.++. +.++++||||.
T Consensus 94 -----------------------------~~RKP~~GM--------------~~~~~~~~~~~~~id~~~Sf~VGDaagr 130 (159)
T PF08645_consen 94 -----------------------------PCRKPNPGM--------------WEFALKDYNDGVEIDLANSFYVGDAAGR 130 (159)
T ss_dssp -----------------------------TTSTTSSHH--------------HHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred -----------------------------CCCCCchhH--------------HHHHHHhccccccccccceEEEeccCCC
Confidence 256999999 8999988874 89999999995
Q ss_pred --------hhhHHHHHHcCCCEE
Q 020675 304 --------QSGVAGAQRIGMPCV 318 (323)
Q Consensus 304 --------~~Di~aA~~aG~~~v 318 (323)
..|.+-|.++|++..
T Consensus 131 ~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 131 SKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp TB-S--S--HHHHHHHHHT--EE
T ss_pred CCcccccChhHHHHHHHcCCccc
Confidence 579999999999853
No 105
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=98.97 E-value=6.4e-09 Score=88.97 Aligned_cols=41 Identities=15% Similarity=0.186 Sum_probs=35.3
Q ss_pred HHHHHHHcCC-----CCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 283 LRAGAEYAEK-----PVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 283 ~~~al~~lgv-----~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
++.+++.++. .|+++++|||.. +||.+|...|+.+|+|..|
T Consensus 120 ~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 120 FREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDG 166 (168)
T ss_pred HHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence 5667777764 499999999995 7999999999999999875
No 106
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=98.96 E-value=1.1e-08 Score=96.93 Aligned_cols=49 Identities=14% Similarity=0.242 Sum_probs=42.3
Q ss_pred hcCCCccccCCCCchhHHHHHHHHHHHHHc--------CC-----CCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYA--------EK-----PVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~al~~l--------gv-----~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
..||+|.+ |+.+++.+ ++ ++++++||||+. +||.+|+++||.+|+|.+|
T Consensus 231 ~GKP~~~~--------------~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG 293 (321)
T TIGR01456 231 LGKPTKLT--------------YDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTG 293 (321)
T ss_pred cCCCChHH--------------HHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEeccc
Confidence 47888888 88888777 43 457999999997 8999999999999999886
No 107
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=98.93 E-value=6e-09 Score=98.84 Aligned_cols=124 Identities=14% Similarity=0.133 Sum_probs=85.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHc-C-------CCccccceeechhhhhhhhhccccccccc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL-G-------SERISKIKIVGNEEVERSLYGQFVLGKGI 231 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~l-g-------l~~~fd~~v~s~~~~~~~~~~~~~~g~~v 231 (323)
+.+.||+.++|+.|+++|++++|+|| +....+..+++.+ | +.++||.++.++ .. ...|+..-+-..+
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTN---S~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a-~K-P~FF~~~~pf~~v 257 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTN---SDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDA-RK-PGFFTEGRPFRQV 257 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHhhCCcccccchHhhCcEEEeCC-CC-CcccCCCCceEEE
Confidence 55799999999999999999999999 6779999999996 7 899999764433 21 2223211110000
Q ss_pred ccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCc-------cccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh
Q 020675 232 SSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSV-------DIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ 304 (323)
Q Consensus 232 ~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p-------~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~ 304 (323)
++.. +..|+.. .+|.+.. .....+.+|+.+++++||||..
T Consensus 258 ----~~~~--------------------g~~~~~~~~~l~~g~vY~gGn---------~~~~~~~l~~~~~~vlYvGD~i 304 (343)
T TIGR02244 258 ----DVET--------------------GSLKWGEVDGLEPGKVYSGGS---------LKQFHELLKWRGKEVLYFGDHI 304 (343)
T ss_pred ----eCCC--------------------CcccCCccccccCCCeEeCCC---------HHHHHHHHCCCCCcEEEECCcc
Confidence 0000 0001111 1222111 5677888999999999999996
Q ss_pred -hhHHHHH-HcCCCEEEEc
Q 020675 305 -SGVAGAQ-RIGMPCVVMR 321 (323)
Q Consensus 305 -~Di~aA~-~aG~~~v~v~ 321 (323)
.||.+|+ .+||.+|+|.
T Consensus 305 ~~Di~~~kk~~Gw~TvlI~ 323 (343)
T TIGR02244 305 YGDLLRSKKKRGWRTAAII 323 (343)
T ss_pred hHHHHhhHHhcCcEEEEEc
Confidence 6999998 9999999885
No 108
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=98.92 E-value=1.1e-08 Score=87.14 Aligned_cols=100 Identities=11% Similarity=0.103 Sum_probs=70.7
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH---cCCCccccceeechhhhhhhhhcccccccccccCcc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK---LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVD 236 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~---lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~ 236 (323)
.+++|++.+.|++-++.|+++.|.|+. ........+.. .++..+|+.. |++.. |.
T Consensus 102 ahlypDav~~ik~wk~~g~~vyiYSSG---SV~AQkL~Fghs~agdL~~lfsGy-----------fDtti-G~------- 159 (229)
T COG4229 102 AHLYPDAVQAIKRWKALGMRVYIYSSG---SVKAQKLFFGHSDAGDLNSLFSGY-----------FDTTI-GK------- 159 (229)
T ss_pred cccCHhHHHHHHHHHHcCCcEEEEcCC---CchhHHHhhcccccccHHhhhcce-----------eeccc-cc-------
Confidence 569999999999999999999999994 33433333322 2233333221 11100 00
Q ss_pred hhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCC
Q 020675 237 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMP 316 (323)
Q Consensus 237 ~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~ 316 (323)
|-...- |.+++...|++|.+++|+.|.+..+.||+.+||+
T Consensus 160 --------------------------KrE~~S--------------Y~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~ 199 (229)
T COG4229 160 --------------------------KRESQS--------------YAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLA 199 (229)
T ss_pred --------------------------cccchh--------------HHHHHHhcCCCchheEEecCCHHHHHHHHhcchh
Confidence 111122 8999999999999999999999999999999999
Q ss_pred EEEEc
Q 020675 317 CVVMR 321 (323)
Q Consensus 317 ~v~v~ 321 (323)
++++.
T Consensus 200 t~l~~ 204 (229)
T COG4229 200 TGLAV 204 (229)
T ss_pred eeeee
Confidence 98764
No 109
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.90 E-value=1.8e-08 Score=87.25 Aligned_cols=40 Identities=23% Similarity=0.536 Sum_probs=36.2
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcc
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~ 206 (323)
|++.++|+.++++|++++|+|+ ++...++.+++.+|+...
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~---~~~~~i~~~~~~~~i~~~ 131 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSG---SPDEIIEPIAERLGIDDD 131 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEE---EEHHHHHHHHHHTTSSEG
T ss_pred hhHHHHHHHHHHCCCEEEEECC---CcHHHHHHHHHHcCCCce
Confidence 6666999999999999999999 788999999999999863
No 110
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.84 E-value=7.8e-09 Score=92.58 Aligned_cols=37 Identities=19% Similarity=0.129 Sum_probs=34.7
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++++++++|||+.||+.|++.+|+.+++
T Consensus 162 l~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam 198 (230)
T PRK01158 162 LKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAV 198 (230)
T ss_pred HHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEe
Confidence 7889999999999999999999999999999998765
No 111
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.82 E-value=4.2e-08 Score=87.44 Aligned_cols=37 Identities=11% Similarity=0.049 Sum_probs=34.5
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++++++++|||+.||+.|++.+|+.+++
T Consensus 154 i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam 190 (225)
T TIGR01482 154 VKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAV 190 (225)
T ss_pred HHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEc
Confidence 7889999999999999999999999999999998654
No 112
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=98.77 E-value=6.5e-08 Score=88.76 Aligned_cols=49 Identities=10% Similarity=0.029 Sum_probs=44.5
Q ss_pred hcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
..||++.+ ++.++++++++|++|+||||+. +||.-+++.|+++++|.+|
T Consensus 222 ~GKP~~~m--------------~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltG 271 (306)
T KOG2882|consen 222 LGKPSTFM--------------FEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSG 271 (306)
T ss_pred cCCCCHHH--------------HHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecC
Confidence 56777777 8999999999999999999997 5999999999999999886
No 113
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=98.77 E-value=3.4e-07 Score=80.45 Aligned_cols=111 Identities=16% Similarity=0.303 Sum_probs=71.0
Q ss_pred CceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccC-CcH----HHHHHHHHhH---HHHHHHH
Q 020675 83 RDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSA-GDE----DRMLVLFFNR---KNALDEF 154 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~---~~~~~~~ 154 (323)
+-..++||||-||+|.... +.+.+.++.. +...++..... +.. .++......+ .+.....
T Consensus 12 ~ril~~FDFD~TIid~dSD------~wVv~~lp~~------~l~~qL~~t~p~~~Wne~M~rv~k~Lheqgv~~~~ik~~ 79 (256)
T KOG3120|consen 12 PRILLVFDFDRTIIDQDSD------NWVVDELPTT------DLFNQLRDTYPKGFWNELMDRVFKELHEQGVRIAEIKQV 79 (256)
T ss_pred CcEEEEEecCceeecCCcc------hHHHHhcccc------hhHHHHHHhcccchHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 3448889999999998875 3344444443 11111111111 111 1111111111 2233332
Q ss_pred HhcCCCCCChhHHHHHHHHHHCCC-cEEEEcCCCCCChHHHHHHHHHcCCCccccce
Q 020675 155 LASKDAPLRPGVEDFVDDAYNEGI-PLIVLTAYGKSGDRIARSVVEKLGSERISKIK 210 (323)
Q Consensus 155 i~~~~~~l~pgv~elL~~Lk~~Gi-~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~ 210 (323)
+ ..++..||+.++++.+++.|. .+.|+|. .+...++.+++.+|+.++|..+
T Consensus 80 ~--r~iP~~Pgmv~lik~~ak~g~~eliIVSD---aNsfFIe~~Lea~~~~d~F~~I 131 (256)
T KOG3120|consen 80 L--RSIPIVPGMVRLIKSAAKLGCFELIIVSD---ANSFFIEEILEAAGIHDLFSEI 131 (256)
T ss_pred H--hcCCCCccHHHHHHHHHhCCCceEEEEec---CchhHHHHHHHHccHHHHHHHH
Confidence 2 358899999999999999985 9999999 5789999999999999999853
No 114
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.76 E-value=3.4e-08 Score=91.29 Aligned_cols=37 Identities=14% Similarity=0.106 Sum_probs=34.9
Q ss_pred HHHHHHHcCCCC-CcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPV-RNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p-~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|+++ +++++|||+.||+.|++.+|+.+++
T Consensus 195 l~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam 232 (273)
T PRK00192 195 VRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVV 232 (273)
T ss_pred HHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEe
Confidence 788899999999 9999999999999999999998776
No 115
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.75 E-value=7.8e-09 Score=86.07 Aligned_cols=80 Identities=11% Similarity=0.188 Sum_probs=65.9
Q ss_pred HHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHHHHhhH
Q 020675 170 VDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKAVSA 249 (323)
Q Consensus 170 L~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~~s~ 249 (323)
|+.|.+.|++++|+|+ .....++...+.||+..+|... .+.
T Consensus 44 ik~l~~~Gi~vAIITG---r~s~ive~Ra~~LGI~~~~qG~----~dK-------------------------------- 84 (170)
T COG1778 44 IKLLLKSGIKVAIITG---RDSPIVEKRAKDLGIKHLYQGI----SDK-------------------------------- 84 (170)
T ss_pred HHHHHHcCCeEEEEeC---CCCHHHHHHHHHcCCceeeech----HhH--------------------------------
Confidence 4566778999999999 4568899999999998766531 111
Q ss_pred HHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 250 QKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 250 ~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
.++|+.+++++++.+++|.||||-.+|+...+++|+.++
T Consensus 85 ------------------------------~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a 123 (170)
T COG1778 85 ------------------------------LAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVA 123 (170)
T ss_pred ------------------------------HHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccc
Confidence 123899999999999999999999999999999999865
No 116
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=98.75 E-value=2.3e-07 Score=79.29 Aligned_cols=119 Identities=24% Similarity=0.396 Sum_probs=71.2
Q ss_pred EEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcH---HHHHHHHHhHHHHHHHHHhcCCCCC
Q 020675 86 AVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDE---DRMLVLFFNRKNALDEFLASKDAPL 162 (323)
Q Consensus 86 aViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~l 162 (323)
.|+-|+|||++-.+.. ..+...+|.+ +|. ..+...+.....-. .+|+.....-.++..+.+.. .+.+
T Consensus 5 vi~sDFDGTITl~Ds~------~~itdtf~~~--e~k-~l~~~vls~tiS~rd~~g~mf~~i~~s~~Eile~llk-~i~I 74 (220)
T COG4359 5 VIFSDFDGTITLNDSN------DYITDTFGPG--EWK-ALKDGVLSKTISFRDGFGRMFGSIHSSLEEILEFLLK-DIKI 74 (220)
T ss_pred EEEecCCCceEecchh------HHHHhccCch--HHH-HHHHHHhhCceeHHHHHHHHHHhcCCCHHHHHHHHHh-hccc
Confidence 6778999999854432 4445556665 242 44444433222111 11211111112333344433 3779
Q ss_pred ChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcC-CCccccceeechhhh
Q 020675 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-SERISKIKIVGNEEV 217 (323)
Q Consensus 163 ~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lg-l~~~fd~~v~s~~~~ 217 (323)
.||.+++++.+++++++++|+|+ +-...+..+++..+ -+......+++.+..
T Consensus 75 dp~fKef~e~ike~di~fiVvSs---Gm~~fI~~lfe~ivgke~i~~idi~sn~~~ 127 (220)
T COG4359 75 DPGFKEFVEWIKEHDIPFIVVSS---GMDPFIYPLFEGIVGKERIYCIDIVSNNDY 127 (220)
T ss_pred CccHHHHHHHHHHcCCCEEEEeC---CCchHHHHHHHhhccccceeeeEEeecCce
Confidence 99999999999999999999999 55788888888754 444444445555443
No 117
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.75 E-value=2.8e-08 Score=91.65 Aligned_cols=52 Identities=13% Similarity=0.188 Sum_probs=44.2
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhh
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVER 219 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~ 219 (323)
||+.++|++|+++|++++|+|| +....+...++.+|++.+|+.+ +++++...
T Consensus 149 PgV~EaL~~LkekGikLaIaTS---~~Re~v~~~L~~lGLd~YFdvI-Is~Gdv~~ 200 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSY---GDRDHVVESMRKVKLDRYFDII-ISGGHKAE 200 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEEC---CCHHHHHHHHHHcCCCcccCEE-EECCcccc
Confidence 7999999999999999999999 5678888999999999999874 55544433
No 118
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.66 E-value=1.1e-07 Score=84.44 Aligned_cols=37 Identities=14% Similarity=0.103 Sum_probs=34.9
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++++++++|||+.||+.|++.+|+.+++
T Consensus 152 i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam 188 (215)
T TIGR01487 152 VEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAV 188 (215)
T ss_pred HHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEc
Confidence 7889999999999999999999999999999998765
No 119
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.64 E-value=2.9e-07 Score=82.07 Aligned_cols=37 Identities=5% Similarity=-0.031 Sum_probs=34.4
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++++++++|||+.||+.|.+.+|..+++
T Consensus 184 l~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 184 ANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred HHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 6888999999999999999999999999999988664
No 120
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.64 E-value=5.9e-08 Score=98.53 Aligned_cols=88 Identities=17% Similarity=0.206 Sum_probs=69.2
Q ss_pred CCCChhHHHHHHHHHHCC-CcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 160 APLRPGVEDFVDDAYNEG-IPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~G-i~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
.+++||+.++|+.|+++| ++++++|| .+...++.+++.+|++++|... ..++
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTg---d~~~~a~~i~~~lgi~~~f~~~--~p~~---------------------- 435 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTG---DNRSAAEAVAAELGIDEVHAEL--LPED---------------------- 435 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeC---CCHHHHHHHHHHhCCCeeeccC--CHHH----------------------
Confidence 468999999999999999 99999999 6788999999999998877642 1000
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
| ..++++++..+++|+||||+.+|+.++++||+.+.
T Consensus 436 ------------------------K--------------------~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia 471 (556)
T TIGR01525 436 ------------------------K--------------------LAIVKELQEEGGVVAMVGDGINDAPALAAADVGIA 471 (556)
T ss_pred ------------------------H--------------------HHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEE
Confidence 1 01233344467799999999999999999995443
No 121
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.64 E-value=6.8e-08 Score=97.65 Aligned_cols=87 Identities=11% Similarity=0.124 Sum_probs=70.3
Q ss_pred CCCChhHHHHHHHHHHCCC-cEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 160 APLRPGVEDFVDDAYNEGI-PLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi-~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
.+++||+.++|+.|+++|+ +++++|| .+...++.+++.+|++++|...
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTg---d~~~~a~~i~~~lgi~~~f~~~---------------------------- 409 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTG---DRRAVAERVARELGIDEVHAEL---------------------------- 409 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcC---CCHHHHHHHHHHcCChhhhhcc----------------------------
Confidence 4689999999999999999 9999999 6789999999999998877632
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
.|.+ + ..++++++.+.++++||||+.+|+.++++||+..
T Consensus 410 ------------------------~p~~---------K-------~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgi 448 (536)
T TIGR01512 410 ------------------------LPED---------K-------LEIVKELREKYGPVAMVGDGINDAPALAAADVGI 448 (536)
T ss_pred ------------------------CcHH---------H-------HHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEE
Confidence 1110 0 1234555556689999999999999999999743
No 122
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.62 E-value=1.1e-07 Score=87.66 Aligned_cols=38 Identities=11% Similarity=0.167 Sum_probs=35.1
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+++.+++++|++++++++|||+.||+.|.+.+|..+++
T Consensus 192 al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm 229 (272)
T PRK15126 192 ALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIM 229 (272)
T ss_pred HHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceec
Confidence 47899999999999999999999999999999987664
No 123
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.58 E-value=2.2e-07 Score=84.33 Aligned_cols=93 Identities=9% Similarity=0.158 Sum_probs=67.6
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc-cccceeechhhhhhhhhcccccccccccCcchh
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~-~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
..++||+.++|+.|+++|++++++||+++. .......++.+|+.. +|+.+ +++++....
T Consensus 23 ~~~~pga~e~L~~L~~~G~~~~ivTN~~~~-~~~~~~~L~~~gl~~~~~~~I-i~s~~~~~~------------------ 82 (242)
T TIGR01459 23 NHTYPGAVQNLNKIIAQGKPVYFVSNSPRN-IFSLHKTLKSLGINADLPEMI-ISSGEIAVQ------------------ 82 (242)
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCCC-hHHHHHHHHHCCCCccccceE-EccHHHHHH------------------
Confidence 347999999999999999999999996431 122236889999987 88874 555443221
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
. +..+++++++.++++++|||+..|++.....|.
T Consensus 83 -----------------------------~--------------l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 83 -----------------------------M--------------ILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred -----------------------------H--------------HHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 0 555667778888888888888877776655554
No 124
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.55 E-value=2.2e-07 Score=85.13 Aligned_cols=37 Identities=11% Similarity=0.127 Sum_probs=34.7
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++++++++|||+.||+.|.+.+|..+++
T Consensus 194 l~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam 230 (264)
T COG0561 194 LQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAM 230 (264)
T ss_pred HHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeec
Confidence 7888999999999999999999999999999998765
No 125
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.55 E-value=1.6e-07 Score=86.20 Aligned_cols=38 Identities=13% Similarity=0.149 Sum_probs=35.3
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+++.+++++|++++++++|||+.||++|.+.+|+.+++
T Consensus 200 al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm 237 (270)
T PRK10513 200 GVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAM 237 (270)
T ss_pred HHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEe
Confidence 37899999999999999999999999999999997665
No 126
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.49 E-value=2.4e-07 Score=94.21 Aligned_cols=42 Identities=26% Similarity=0.510 Sum_probs=38.8
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
.+++||+.++|+.|+++|++++++|+ .+...++.+.+.+|++
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSg---d~~~~a~~ia~~lgi~ 445 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTG---DNRKTAKAVAKELGIN 445 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcC---CCHHHHHHHHHHcCCc
Confidence 45899999999999999999999999 6789999999999996
No 127
>PRK10976 putative hydrolase; Provisional
Probab=98.48 E-value=7.3e-07 Score=81.75 Aligned_cols=38 Identities=18% Similarity=0.322 Sum_probs=35.4
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+++.+++++|++++++++|||+.||+.|.+.+|+.+++
T Consensus 194 al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm 231 (266)
T PRK10976 194 ALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIM 231 (266)
T ss_pred HHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeee
Confidence 47899999999999999999999999999999998765
No 128
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.45 E-value=8.8e-08 Score=81.88 Aligned_cols=97 Identities=16% Similarity=0.168 Sum_probs=77.5
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc-cccceeechhhhhhhhhcccccccccccCcchh
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER-ISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~-~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
+..+||+.++|+.|.+. +.++|.|+ +...+++.+++.++... +|+..+ +.++...
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts---~~~~yA~~il~~ldp~~~~f~~~l-~r~~~~~------------------- 96 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTA---SLEEYADPVLDILDRGGKVISRRL-YRESCVF------------------- 96 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcC---CcHHHHHHHHHHHCcCCCEEeEEE-EccccEE-------------------
Confidence 56899999999999987 99999999 66899999999999876 787653 3332211
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
.||. |.+.++.+|.+++++|+|||+..|+.++.++|+.+.
T Consensus 97 -----------------------~~~~-----------------~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 97 -----------------------TNGK-----------------YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred -----------------------eCCC-----------------EEeEchhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 1222 245678899999999999999999999999998865
Q ss_pred EE
Q 020675 319 VM 320 (323)
Q Consensus 319 ~v 320 (323)
..
T Consensus 137 ~f 138 (162)
T TIGR02251 137 SW 138 (162)
T ss_pred CC
Confidence 43
No 129
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.39 E-value=7.5e-07 Score=72.10 Aligned_cols=50 Identities=18% Similarity=0.098 Sum_probs=44.2
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccccee
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKI 211 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v 211 (323)
.+.++|.+++++..+++.|+-+..+|= +....+-..+..+++..||+..+
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sW---N~~~kA~~aLral~~~~yFhy~V 88 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASW---NFEDKAIKALRALDLLQYFHYIV 88 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeec---CchHHHHHHHHHhchhhhEEEEE
Confidence 366999999999999999999999986 56788888999999999999764
No 130
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.39 E-value=9.3e-07 Score=81.77 Aligned_cols=49 Identities=16% Similarity=0.147 Sum_probs=42.5
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhh
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEE 216 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~ 216 (323)
|++.++|++|+++|++++|+|| +....+...++.+|+..+|+.+ +++++
T Consensus 151 p~V~EtL~eLkekGikLaIvTN---g~Re~v~~~Le~lgL~~yFDvI-I~~g~ 199 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSY---GNREHVVHSLKETKLEGYFDII-ICGGR 199 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcC---CChHHHHHHHHHcCCCccccEE-EECCC
Confidence 7899999999999999999999 5678899999999999999875 44433
No 131
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=98.39 E-value=8.1e-07 Score=80.18 Aligned_cols=54 Identities=24% Similarity=0.349 Sum_probs=43.6
Q ss_pred HHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcc
Q 020675 153 EFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206 (323)
Q Consensus 153 ~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~ 206 (323)
+.+.....++.||+.+|++.++++|+.|.++||........+..-|...|+...
T Consensus 107 ~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~ 160 (229)
T PF03767_consen 107 EWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW 160 (229)
T ss_dssp HHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB
T ss_pred HHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc
Confidence 333444457999999999999999999999999776666777888888997643
No 132
>PLN02887 hydrolase family protein
Probab=98.38 E-value=2.9e-07 Score=93.36 Aligned_cols=38 Identities=5% Similarity=0.016 Sum_probs=35.2
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+++.+++++|++++++++|||+.||++|.+.+|+.+++
T Consensus 511 ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAM 548 (580)
T PLN02887 511 GVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVAL 548 (580)
T ss_pred HHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEe
Confidence 37899999999999999999999999999999997665
No 133
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=98.37 E-value=1.7e-07 Score=82.08 Aligned_cols=29 Identities=21% Similarity=0.427 Sum_probs=22.5
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCC
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYG 187 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~ 187 (323)
.++|.||+.|+|+.|.+.|+.+.++|.+.
T Consensus 71 ~l~p~~gA~e~l~~L~~~g~~~~~Itar~ 99 (191)
T PF06941_consen 71 NLPPIPGAVEALKKLRDKGHEIVIITARP 99 (191)
T ss_dssp T--B-TTHHHHHHHHHTSTTEEEEEEE-S
T ss_pred CCCccHHHHHHHHHHHHcCCcEEEEEecC
Confidence 47899999999999999998888888754
No 134
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=98.33 E-value=2.9e-06 Score=76.28 Aligned_cols=53 Identities=15% Similarity=0.139 Sum_probs=41.6
Q ss_pred HHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcc
Q 020675 154 FLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206 (323)
Q Consensus 154 ~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~ 206 (323)
.+.....++.|++.++++.|+++|+++.++|+.+......+...|...|+..+
T Consensus 113 wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~ 165 (229)
T TIGR01675 113 WLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW 165 (229)
T ss_pred HHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc
Confidence 34455678999999999999999999999999653233446677888888764
No 135
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.33 E-value=7.4e-07 Score=81.30 Aligned_cols=38 Identities=13% Similarity=0.143 Sum_probs=35.3
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+++.+++.+|++++++++|||+.||+.|++.+|+.+++
T Consensus 192 ~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~ 229 (256)
T TIGR00099 192 ALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAM 229 (256)
T ss_pred HHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEe
Confidence 37889999999999999999999999999999998765
No 136
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.32 E-value=1e-05 Score=72.82 Aligned_cols=36 Identities=3% Similarity=0.017 Sum_probs=30.8
Q ss_pred HHHHHHHcCC--CCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 283 LRAGAEYAEK--PVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 283 ~~~al~~lgv--~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
.+..++.+++ +++++++|||+.||+.|.+.+|+.++
T Consensus 186 l~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 186 IKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred HHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 5666777765 77799999999999999999999865
No 137
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.32 E-value=1.3e-06 Score=92.85 Aligned_cols=88 Identities=11% Similarity=0.188 Sum_probs=70.5
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHH
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~ 240 (323)
+++||+.+.|+.|++.|++++++|+ .....++.+.+.+|++++|....
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tg---d~~~~a~~ia~~lgi~~~~~~~~----------------------------- 697 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTG---DNPTTANAIAKEAGIDEVIAGVL----------------------------- 697 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCCEEEeCCC-----------------------------
Confidence 6899999999999999999999999 56788999999999987665310
Q ss_pred HHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 241 ~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
| ++ -..++++++..+++++||||+.||+.++++||+...+
T Consensus 698 -----------------------p---------~~-------K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~ 737 (834)
T PRK10671 698 -----------------------P---------DG-------KAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAM 737 (834)
T ss_pred -----------------------H---------HH-------HHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEe
Confidence 0 00 0134556666788999999999999999999995543
No 138
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.31 E-value=1.2e-06 Score=80.96 Aligned_cols=38 Identities=8% Similarity=-0.046 Sum_probs=35.3
Q ss_pred HHHHHHHHcCC---CCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 282 ALRAGAEYAEK---PVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 282 ~~~~al~~lgv---~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+++.+++++|+ ++++++.|||+.||+.|-+.+|..+++
T Consensus 191 al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM 231 (271)
T PRK03669 191 AANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVV 231 (271)
T ss_pred HHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEe
Confidence 37899999999 999999999999999999999998776
No 139
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.27 E-value=6.3e-06 Score=70.07 Aligned_cols=39 Identities=28% Similarity=0.381 Sum_probs=28.7
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK 200 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~ 200 (323)
..|++.++++.++++|++++++|++..+....++..++.
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 358999999999999999999999542222223466666
No 140
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=98.25 E-value=2.6e-05 Score=71.44 Aligned_cols=113 Identities=17% Similarity=0.314 Sum_probs=72.5
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechh------------hhhhhhhcccccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE------------EVERSLYGQFVLG 228 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~------------~~~~~~~~~~~~g 228 (323)
..-+.+.++++.|++.|+++..+|..+.+......+.|..+|++ |.......+ ......+.++...
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~--fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft 158 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGID--FSSSSFPEDGIISFPVFDSALSRAPSFYDGILFT 158 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCC--ccccccccCcceecccccCCCCCCceeecCeEEe
Confidence 36789999999999999999999997655566677778888885 221100000 0000011111111
Q ss_pred cccccCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHH
Q 020675 229 KGISSGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVA 308 (323)
Q Consensus 229 ~~v~~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~ 308 (323)
.+...| .++...+++.|..|+.+|||+|+..++.
T Consensus 159 ~~~~KG----------------------------------------------~~L~~fL~~~~~~pk~IIfIDD~~~nl~ 192 (252)
T PF11019_consen 159 GGQDKG----------------------------------------------EVLKYFLDKINQSPKKIIFIDDNKENLK 192 (252)
T ss_pred CCCccH----------------------------------------------HHHHHHHHHcCCCCCeEEEEeCCHHHHH
Confidence 111111 1278899999999999999999987665
Q ss_pred H----HHHcCCCEEEEc
Q 020675 309 G----AQRIGMPCVVMR 321 (323)
Q Consensus 309 a----A~~aG~~~v~v~ 321 (323)
. .++.|+..+++.
T Consensus 193 sv~~a~k~~~I~f~G~~ 209 (252)
T PF11019_consen 193 SVEKACKKSGIDFIGFH 209 (252)
T ss_pred HHHHHHhhCCCcEEEEE
Confidence 4 445688777764
No 141
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=98.15 E-value=5.2e-06 Score=76.01 Aligned_cols=51 Identities=18% Similarity=0.251 Sum_probs=40.9
Q ss_pred HhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 155 LASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 155 i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
+.....++.|++.++.+.++++|+++.++||.+...+..+..-|.+.|+..
T Consensus 139 v~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~ 189 (275)
T TIGR01680 139 VNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHT 189 (275)
T ss_pred HhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCC
Confidence 345568899999999999999999999999975434455666777788764
No 142
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.11 E-value=7.6e-06 Score=87.50 Aligned_cols=114 Identities=21% Similarity=0.293 Sum_probs=75.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHH
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~ 240 (323)
+++||+.+.|+.|+++|++++++|+ .....+..+.+.+|+...++.. +++++.... .+.+
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTG---D~~~tA~~ia~~~Gi~~~~~~~-v~g~~l~~~--------------~~~~-- 587 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITG---DSQETAVSIARRLGMPSKTSQS-VSGEKLDAM--------------DDQQ-- 587 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCCCCCce-eEhHHhHhC--------------CHHH--
Confidence 6899999999999999999999999 6789999999999998766653 344333210 0000
Q ss_pred HHHHHHhhHHHHHHHHHHHhhcCCCccccC-CCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDT-SSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 241 ~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~-~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
-.++. ++..++. .+|+.+..+ -..+++. .+.+.|+||+.||+.|.++|++...+
T Consensus 588 ----------l~~~~--------~~~~Vfar~~P~~K~~i----v~~lq~~---g~~v~mvGDGvND~pAl~~AdVGia~ 642 (884)
T TIGR01522 588 ----------LSQIV--------PKVAVFARASPEHKMKI----VKALQKR---GDVVAMTGDGVNDAPALKLADIGVAM 642 (884)
T ss_pred ----------HHHHh--------hcCeEEEECCHHHHHHH----HHHHHHC---CCEEEEECCCcccHHHHHhCCeeEec
Confidence 00111 1112211 112233332 2334444 47899999999999999999976543
No 143
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=98.09 E-value=4.3e-05 Score=65.22 Aligned_cols=96 Identities=8% Similarity=0.062 Sum_probs=62.8
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHH-HcCCCccccceeechhhhhhhhhcccccccccccCcchhHH
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVE-KLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~-~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~ 240 (323)
|.+-++++|+-..++|-.++.+|+.+.+..+.+...|. .+.+....... +.++
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~-f~Gd------------------------- 168 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVI-FAGD------------------------- 168 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCccee-eccC-------------------------
Confidence 66778899999999999999999976443344444443 35554433321 2111
Q ss_pred HHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEE
Q 020675 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 320 (323)
Q Consensus 241 ~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v 320 (323)
||.|.-|+ --.++..-++ -|+.|||.+||.+|+.+|++.|.+
T Consensus 169 ----------------------k~k~~qy~------------Kt~~i~~~~~----~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 169 ----------------------KPKPGQYT------------KTQWIQDKNI----RIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred ----------------------CCCccccc------------ccHHHHhcCc----eEEecCCchhhhHHHhcCccceeE
Confidence 55555432 1123444444 489999999999999999998876
Q ss_pred c
Q 020675 321 R 321 (323)
Q Consensus 321 ~ 321 (323)
.
T Consensus 211 l 211 (237)
T COG3700 211 L 211 (237)
T ss_pred E
Confidence 4
No 144
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=98.00 E-value=1.8e-05 Score=82.98 Aligned_cols=43 Identities=23% Similarity=0.327 Sum_probs=39.6
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~ 206 (323)
+++||+.+.|+.|++.|++++++|+ .+...++.+.+.+|++.+
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTG---d~~~~a~~ia~~lgi~~~ 610 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTG---DNPRAAAAIAGELGIDFR 610 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCee
Confidence 6899999999999999999999999 678999999999999743
No 145
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.96 E-value=1.9e-05 Score=80.69 Aligned_cols=38 Identities=16% Similarity=0.163 Sum_probs=34.7
Q ss_pred HHHHHHHHcCCCCCcEEEE--cCChhhHHHHHHcCCCEEE
Q 020675 282 ALRAGAEYAEKPVRNCFLI--AGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~V--GDs~~Di~aA~~aG~~~v~ 319 (323)
|++.+++.+|++.++++.| ||+.||+.|.+.+|..+++
T Consensus 617 AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM 656 (694)
T PRK14502 617 AIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILV 656 (694)
T ss_pred HHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEE
Confidence 3788899999999999998 9999999999999998776
No 146
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.84 E-value=0.00013 Score=66.67 Aligned_cols=39 Identities=21% Similarity=0.098 Sum_probs=32.6
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
++.+++++++++++++++|||.||+.|. ..+...|.|.+
T Consensus 170 l~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~N 208 (247)
T PF05116_consen 170 LRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGN 208 (247)
T ss_dssp HHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TT
T ss_pred HHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcC
Confidence 7889999999999999999999999998 77778888865
No 147
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.83 E-value=0.00045 Score=63.76 Aligned_cols=32 Identities=19% Similarity=0.104 Sum_probs=29.6
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHc
Q 020675 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 313 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~a 313 (323)
+++.+++.+|+..+++++|||+.+|+.|.+.+
T Consensus 178 al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~ 209 (266)
T PRK10187 178 AIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVV 209 (266)
T ss_pred HHHHHHHhcCCCCCeEEEEcCCccHHHHHHHH
Confidence 37889999999999999999999999999888
No 148
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=97.71 E-value=0.00079 Score=67.40 Aligned_cols=99 Identities=17% Similarity=0.199 Sum_probs=61.7
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH-cCCCccccceeechh-hh-hhhhhcccccccccccCcchh
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSERISKIKIVGNE-EV-ERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~-lgl~~~fd~~v~s~~-~~-~~~~~~~~~~g~~v~~~~~~~ 238 (323)
++|.+.+.+ +++|. .+|+|. +++..++.+.+. +|++.. ++.+ ++ ..+.|++.+.|.+.-.|
T Consensus 111 l~~~a~~~~---~~~g~-~vvVSA---Sp~~~Vepfa~~~LGid~V-----IgTeLev~~~G~~TG~i~g~~~c~G---- 174 (497)
T PLN02177 111 VHPETWRVF---NSFGK-RYIITA---SPRIMVEPFVKTFLGADKV-----LGTELEVSKSGRATGFMKKPGVLVG---- 174 (497)
T ss_pred cCHHHHHHH---HhCCC-EEEEEC---CcHHHHHHHHHHcCCCCEE-----EecccEECcCCEEeeeecCCCCCcc----
Confidence 667666644 45675 499998 678999999975 898753 3333 22 24556655555322111
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
++. ...+.+.+|.+..+ ++.|||.+|..+...++-..+
T Consensus 175 --------------------------------------e~K---v~rl~~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~ 212 (497)
T PLN02177 175 --------------------------------------DHK---RDAVLKEFGDALPD-LGLGDRETDHDFMSICKEGYM 212 (497)
T ss_pred --------------------------------------HHH---HHHHHHHhCCCCce-EEEECCccHHHHHHhCCccEE
Confidence 001 12233556644444 899999999999999886544
No 149
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.69 E-value=7.5e-05 Score=77.13 Aligned_cols=45 Identities=16% Similarity=0.283 Sum_probs=40.8
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd 208 (323)
+++|++++.++.|++.|++++++|+ .+...+..+.+.+|+++++.
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTG---D~~~ta~~iA~~lGI~~v~a 490 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITG---DNRLTAAAIAAEAGVDDFIA 490 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCEEEc
Confidence 6899999999999999999999999 67899999999999986543
No 150
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=97.66 E-value=0.00026 Score=73.28 Aligned_cols=45 Identities=16% Similarity=0.324 Sum_probs=41.1
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd 208 (323)
+++|++++.+++|++.|+++.++|+ .+...+..+-+.+|++++|.
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTG---Dn~~TA~aIA~elGI~~v~A 485 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTG---DNELTAATIAKEAGVDRFVA 485 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCceEEc
Confidence 6899999999999999999999999 67899999999999987554
No 151
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.63 E-value=0.00012 Score=75.94 Aligned_cols=47 Identities=23% Similarity=0.446 Sum_probs=42.1
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 209 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~ 209 (323)
-+++|++.+.++.|++.|+++.++|+ .++..++.+-+.+|+++++-.
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTG---Dn~~~A~~iA~~lGId~v~Ae 582 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTG---DNRRTAEAIAKELGIDEVRAE 582 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcChHhhecc
Confidence 36899999999999999999999999 678999999999999876553
No 152
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=97.59 E-value=0.00035 Score=72.39 Aligned_cols=45 Identities=16% Similarity=0.353 Sum_probs=40.6
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd 208 (323)
+++||+++.+++|++.|+++.++|+ .+...+..+-+.+|++++|.
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTG---Dn~~TA~aIA~elGId~v~A 489 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITG---DNPLTAAAIAAEAGVDDFLA 489 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCcEEEc
Confidence 5799999999999999999999999 67899999999999987543
No 153
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=97.55 E-value=0.00015 Score=61.59 Aligned_cols=54 Identities=19% Similarity=0.305 Sum_probs=44.6
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC-ccccceeechhh
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKIVGNEE 216 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~-~~fd~~v~s~~~ 216 (323)
.+.++||+.++|+.|++. +.++|+|+ +.+..+..+++.++.. .+|...+++.++
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~---~~~~yA~~vl~~ldp~~~~F~~ri~~rd~ 110 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTM---GTRAYAQAIAKLIDPDGKYFGDRIISRDE 110 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeC---CcHHHHHHHHHHhCcCCCeeccEEEEecc
Confidence 366899999999999965 99999999 6789999999999998 488545565543
No 154
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.54 E-value=0.00034 Score=75.24 Aligned_cols=43 Identities=26% Similarity=0.509 Sum_probs=38.5
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
-+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+..
T Consensus 536 Dplr~~v~e~I~~l~~aGI~v~miTG---D~~~tA~~ia~~~gi~~ 578 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAGIRVIMITG---DNKETAEAICRRIGIFS 578 (917)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEecC---CCHHHHHHHHHHcCCCC
Confidence 36899999999999999999999999 56788999999999853
No 155
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=97.53 E-value=0.0024 Score=56.88 Aligned_cols=95 Identities=11% Similarity=0.149 Sum_probs=69.5
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcC-------CCccccceeechhhhhhhhhccccccccccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG-------SERISKIKIVGNEEVERSLYGQFVLGKGISS 233 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lg-------l~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~ 233 (323)
..++++...++..+.+|+++.|.|. +.......+...-+ +..|||.. .|.
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSS---gsv~AqKllfg~s~~gdl~~y~~gyfDt~----------------iG~---- 179 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSS---GSVAAQKLLFGYSDAGDLRKYISGYFDTT----------------IGL---- 179 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcC---CcHHHHHHHHcccCcchHHHHhhhhhhcc----------------ccc----
Confidence 5899999999999999999999998 44444444443321 12223321 111
Q ss_pred CcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHc
Q 020675 234 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI 313 (323)
Q Consensus 234 ~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~a 313 (323)
|=.-.. |..+.+.+|.++.+++|.-|-..-..+|+.+
T Consensus 180 -----------------------------K~e~~s--------------y~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~a 216 (254)
T KOG2630|consen 180 -----------------------------KVESQS--------------YKKIGHLIGKSPREILFLTDVPREAAAARKA 216 (254)
T ss_pred -----------------------------eehhHH--------------HHHHHHHhCCChhheEEeccChHHHHHHHhc
Confidence 222222 8899999999999999999999999999999
Q ss_pred CCCEEEEc
Q 020675 314 GMPCVVMR 321 (323)
Q Consensus 314 G~~~v~v~ 321 (323)
|+.+.++.
T Consensus 217 Gl~a~l~~ 224 (254)
T KOG2630|consen 217 GLQAGLVS 224 (254)
T ss_pred ccceeeee
Confidence 99887764
No 156
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=97.50 E-value=0.00082 Score=52.73 Aligned_cols=50 Identities=20% Similarity=0.217 Sum_probs=37.2
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccce
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK 210 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~ 210 (323)
.++||+.++|+.|+++|.+++++||.+..........++.+|+.--.+.+
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i 63 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEI 63 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGE
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEE
Confidence 37899999999999999999999997654556667777889987444443
No 157
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=97.49 E-value=0.0003 Score=69.41 Aligned_cols=130 Identities=10% Similarity=0.087 Sum_probs=70.8
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHc---------CCCccccceeechhhhhhhhhcccccccc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---------GSERISKIKIVGNEEVERSLYGQFVLGKG 230 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~l---------gl~~~fd~~v~s~~~~~~~~~~~~~~g~~ 230 (323)
+...|.+..+|+.||++|.++.++|| +....+..+++.+ ++.++||.+|+.+. ....|+...+--.
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTN---S~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~--KP~FF~~~~pfr~ 256 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITN---SPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDAR--KPGFFTEGRPFRE 256 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-S---S-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES----CCHHHCT---EEE
T ss_pred ccCCchHHHHHHHHHhcCceEEEecC---CCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCC--CCcccCCCCceEE
Confidence 33568999999999999999999999 6778888888863 35689998766543 1112221111100
Q ss_pred cc--cCcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhH
Q 020675 231 IS--SGVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGV 307 (323)
Q Consensus 231 v~--~~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di 307 (323)
+. .|.-.. . + ..+..++. .+| ..+- .....+.+|...+++++|||+. .||
T Consensus 257 vd~~~g~l~~-~----~------------~~~~l~~g-~vY------~gGn---~~~l~~ll~~~g~~VLY~GDhi~~Di 309 (448)
T PF05761_consen 257 VDTETGKLKW-G----K------------YVGPLEKG-KVY------SGGN---WDQLHKLLGWRGKEVLYFGDHIYGDI 309 (448)
T ss_dssp EETTTSSEEC-S-------------------SS--TC--EE------EE-----HHHHHHHCT--GGGEEEEESSTTTTH
T ss_pred EECCCCcccc-c----c------------ccccccCC-CEe------ecCC---HHHHHHHHccCCCeEEEECCchhhhh
Confidence 00 000000 0 0 00000000 111 1121 4566778899999999999996 699
Q ss_pred HHHHHc-CCCEEEEc
Q 020675 308 AGAQRI-GMPCVVMR 321 (323)
Q Consensus 308 ~aA~~a-G~~~v~v~ 321 (323)
...++. ||+|++|-
T Consensus 310 ~~~k~~~gWrT~~Ii 324 (448)
T PF05761_consen 310 LKSKKRHGWRTAAII 324 (448)
T ss_dssp HHHHHHH-SEEEEE-
T ss_pred hhhccccceEEEEEe
Confidence 888777 99999874
No 158
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=97.47 E-value=0.0023 Score=54.19 Aligned_cols=40 Identities=20% Similarity=0.285 Sum_probs=31.7
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHc
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 201 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~l 201 (323)
..||+.++...++++||++..+|+........++..|...
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHH
Confidence 4679999999999999999999996543445666667665
No 159
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=97.45 E-value=0.00011 Score=62.10 Aligned_cols=49 Identities=18% Similarity=0.497 Sum_probs=38.4
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCC-Ccccccee
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS-ERISKIKI 211 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl-~~~fd~~v 211 (323)
.+.++||+.++|+.|.+. +.++|.|. +...++..+++.+.. ..+|+..+
T Consensus 34 ~v~~RP~l~~FL~~l~~~-~ev~i~T~---~~~~ya~~v~~~ldp~~~~~~~~~ 83 (159)
T PF03031_consen 34 YVKLRPGLDEFLEELSKH-YEVVIWTS---ASEEYAEPVLDALDPNGKLFSRRL 83 (159)
T ss_dssp EEEE-TTHHHHHHHHHHH-CEEEEE-S---S-HHHHHHHHHHHTTTTSSEEEEE
T ss_pred eEeeCchHHHHHHHHHHh-ceEEEEEe---ehhhhhhHHHHhhhhhcccccccc
Confidence 356899999999999665 99999999 568999999999987 46776643
No 160
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=97.40 E-value=0.0012 Score=53.69 Aligned_cols=92 Identities=7% Similarity=0.118 Sum_probs=67.9
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhH
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
-++++.+.+.|++|++. +.++|.|+ .....+....+..|+.-..-+ .+++ -
T Consensus 29 Gklf~ev~e~iqeL~d~-V~i~IASg---Dr~gsl~~lae~~gi~~~rv~--a~a~-~---------------------- 79 (152)
T COG4087 29 GKLFSEVSETIQELHDM-VDIYIASG---DRKGSLVQLAEFVGIPVERVF--AGAD-P---------------------- 79 (152)
T ss_pred cEEcHhhHHHHHHHHHh-heEEEecC---CcchHHHHHHHHcCCceeeee--cccC-H----------------------
Confidence 46899999999999999 99999998 445777788888887532221 1111 1
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+. =..+++.++-+-+.|+||||+.||+.+.++|.+..+.
T Consensus 80 ---------------------------e~--------------K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~t 118 (152)
T COG4087 80 ---------------------------EM--------------KAKIIRELKKRYEKVVMVGNGANDILALREADLGICT 118 (152)
T ss_pred ---------------------------HH--------------HHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEE
Confidence 11 2345566766678999999999999999999888665
Q ss_pred Ec
Q 020675 320 MR 321 (323)
Q Consensus 320 v~ 321 (323)
+.
T Consensus 119 iq 120 (152)
T COG4087 119 IQ 120 (152)
T ss_pred ec
Confidence 54
No 161
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=97.40 E-value=0.0007 Score=60.69 Aligned_cols=52 Identities=12% Similarity=0.222 Sum_probs=39.4
Q ss_pred cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCC-hHHHHHHHHHcCCCcccc
Q 020675 157 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSG-DRIARSVVEKLGSERISK 208 (323)
Q Consensus 157 ~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~-~~~~~~~l~~lgl~~~fd 208 (323)
.....+.||+.||++..-++|..+..+||++... ...+..-|..+|+.....
T Consensus 118 a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~ 170 (274)
T COG2503 118 AKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLE 170 (274)
T ss_pred hcccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccc
Confidence 3456799999999999999999999999976433 334555677778865443
No 162
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.35 E-value=0.00083 Score=72.21 Aligned_cols=118 Identities=19% Similarity=0.276 Sum_probs=77.0
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccc-ceeechhhhhhhhhcccccccccccCcchh
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK-IKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd-~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
-+|+|++++.++.|+++|+++.++|+ .....+..+-+.+|+..--. ..++.+.+...- .+.
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTG---D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l--------------~~~- 607 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITG---DHVETAIAIAKECGIEAEAESALVIDGAELDAL--------------SDE- 607 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECC---CCHHHHHHHHHHcCCCCCCCceeEeehHHhhhc--------------CHH-
Confidence 47999999999999999999999999 67899999999999864332 123333333210 000
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCccccC-CCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCE
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVDIDT-SSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~-~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~ 317 (323)
++.+.+. +-+ +|. -+|+.+..++ +++++.| .-+.|.||+.||+.|-++|.+..
T Consensus 608 --------------el~~~~~---~~~--VfARvsP~qK~~IV----~~lq~~g---~vVamtGDGvNDapALk~ADVGI 661 (917)
T COG0474 608 --------------ELAELVE---ELS--VFARVSPEQKARIV----EALQKSG---HVVAMTGDGVNDAPALKAADVGI 661 (917)
T ss_pred --------------HHHHHhh---hCc--EEEEcCHHHHHHHH----HHHHhCC---CEEEEeCCCchhHHHHHhcCccE
Confidence 0111111 111 211 1244454544 4555554 45789999999999999999988
Q ss_pred EEEc
Q 020675 318 VVMR 321 (323)
Q Consensus 318 v~v~ 321 (323)
.+..
T Consensus 662 amg~ 665 (917)
T COG0474 662 AMGG 665 (917)
T ss_pred Eecc
Confidence 6654
No 163
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=97.29 E-value=0.0012 Score=70.73 Aligned_cols=112 Identities=15% Similarity=0.279 Sum_probs=72.0
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHH
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~ 240 (323)
+++|++.+.++.|+++|+++.++|+ .+...+..+.+.+|+.. +. ++++.+...- .+.+
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTG---D~~~tA~aIA~~lGI~~--~~-v~~g~~l~~~--------------~~~e-- 572 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTG---DNEIVTARICQEVGIDA--ND-FLLGADIEEL--------------SDEE-- 572 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCC--CC-eeecHhhhhC--------------CHHH--
Confidence 6899999999999999999999999 67888999999999963 11 2333332210 0000
Q ss_pred HHHHHHhhHHHHHHHHHHHhhcCCCccccCC-CCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 241 ~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~-~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+.+.+ ++..+|.. +|+.+..++ .++++.| +.+.|+||+.||..|-++|.+...+
T Consensus 573 -------------l~~~~-----~~~~vfAr~~Pe~K~~iV----~~lq~~G---~vVam~GDGvNDapALk~AdVGIAm 627 (867)
T TIGR01524 573 -------------LAREL-----RKYHIFARLTPMQKSRII----GLLKKAG---HTVGFLGDGINDAPALRKADVGISV 627 (867)
T ss_pred -------------HHHHh-----hhCeEEEECCHHHHHHHH----HHHHhCC---CEEEEECCCcccHHHHHhCCEEEEe
Confidence 00000 11111111 233444433 3445544 4688999999999999999988665
No 164
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=97.25 E-value=0.0016 Score=68.71 Aligned_cols=42 Identities=21% Similarity=0.358 Sum_probs=38.9
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
+++|++.+.++.|++.|+++.++|+ .+...+..+.+.+|+.+
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~~IA~~lGI~~ 483 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTG---DHLAIAKETARRLGLGT 483 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCC
Confidence 6899999999999999999999999 67889999999999964
No 165
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=97.23 E-value=0.0016 Score=69.96 Aligned_cols=112 Identities=12% Similarity=0.153 Sum_probs=72.2
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHH
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~ 240 (323)
+++|++.+.++.|+++|+++.++|+ .+...+..+.+.+|+.. +. ++++.+...- .+.+
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~aIA~~lGI~~--~~-vi~G~el~~~--------------~~~e-- 607 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTG---DNPIVTAKICREVGLEP--GE-PLLGTEIEAM--------------DDAA-- 607 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCCC--CC-ccchHhhhhC--------------CHHH--
Confidence 6899999999999999999999999 67889999999999963 22 3444333210 0000
Q ss_pred HHHHHHhhHHHHHHHHHHHhhcCCCccccCC-CCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 241 ~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~-~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
..+ + + ++..++.. +|+.+.+++ ..+++.| +-+.|+||+.||..|-++|.+...+
T Consensus 608 --l~~--------~---v-----~~~~VfAr~sPe~K~~iV----~~Lq~~G---~vVamtGDGvNDaPALk~ADVGIAm 662 (903)
T PRK15122 608 --LAR--------E---V-----EERTVFAKLTPLQKSRVL----KALQANG---HTVGFLGDGINDAPALRDADVGISV 662 (903)
T ss_pred --HHH--------H---h-----hhCCEEEEeCHHHHHHHH----HHHHhCC---CEEEEECCCchhHHHHHhCCEEEEe
Confidence 000 0 0 11112111 133444433 3444444 4588999999999999999887554
No 166
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=97.20 E-value=0.0016 Score=69.86 Aligned_cols=113 Identities=13% Similarity=0.219 Sum_probs=73.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhH
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQL 239 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~ 239 (323)
-+++|++.+.++.|+++|+++.++|+ .+...+..+.+.+|+.. + .++++.+...- .+.++
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTG---D~~~tA~~IA~~lGI~~--~-~v~~G~el~~l--------------~~~el 608 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTG---DSELVAAKVCHEVGLDA--G-EVLIGSDIETL--------------SDDEL 608 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCc--c-CceeHHHHHhC--------------CHHHH
Confidence 36899999999999999999999999 67889999999999952 2 23444443220 00000
Q ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCCccccCC-CCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEE
Q 020675 240 ATEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCV 318 (323)
Q Consensus 240 ~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~-~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v 318 (323)
.+ +. ++..++.. +|+.+..++ .++++.| .-+.|+||+.||..|-++|.+...
T Consensus 609 ----~~--------~~--------~~~~VfAr~sPe~K~~IV----~~Lq~~G---~vVam~GDGvNDaPALk~ADVGIA 661 (902)
T PRK10517 609 ----AN--------LA--------ERTTLFARLTPMHKERIV----TLLKREG---HVVGFMGDGINDAPALRAADIGIS 661 (902)
T ss_pred ----HH--------HH--------hhCcEEEEcCHHHHHHHH----HHHHHCC---CEEEEECCCcchHHHHHhCCEEEE
Confidence 00 00 11112111 244444444 3444444 457899999999999999988765
Q ss_pred E
Q 020675 319 V 319 (323)
Q Consensus 319 ~ 319 (323)
+
T Consensus 662 m 662 (902)
T PRK10517 662 V 662 (902)
T ss_pred e
Confidence 4
No 167
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.16 E-value=0.0013 Score=61.21 Aligned_cols=26 Identities=15% Similarity=-0.018 Sum_probs=22.9
Q ss_pred CCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 294 VRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 294 p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+-.+|.+|||+||+.|.+.+.+.+|.
T Consensus 226 ~~~tiaLGDspND~~mLe~~D~~vvi 251 (302)
T PRK12702 226 PIKALGIGCSPPDLAFLRWSEQKVVL 251 (302)
T ss_pred CceEEEecCChhhHHHHHhCCeeEEe
Confidence 44789999999999999999998765
No 168
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=97.07 E-value=0.0022 Score=69.91 Aligned_cols=41 Identities=22% Similarity=0.320 Sum_probs=38.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
+++|++.+.++.|+++|++++++|+ .....+..+.+.+|+.
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTG---D~~~tA~~iA~~~Gi~ 686 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTG---DFPETAKAIAQEVGII 686 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHHcCCC
Confidence 6899999999999999999999999 6778899999999995
No 169
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=97.04 E-value=0.0034 Score=53.23 Aligned_cols=89 Identities=22% Similarity=0.269 Sum_probs=47.6
Q ss_pred eEEEEecCCccccccccchHHHHHHHHHHc-CCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhHHHHHHHHHhcCCCCCC
Q 020675 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQKL-GLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDAPLR 163 (323)
Q Consensus 85 kaViFD~DGTLid~~~~~~~~a~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~ 163 (323)
.-+..|+||||+|.... ..-.+..|++. ... ..+......++... .++++.. + +..+..+..+ ..+.
T Consensus 7 ~~~ciDIDGtit~~~t~--~~~~n~~f~kslse~--d~t~y~lhkil~i~---~ee~~k~-~---e~~ea~l~ke-~l~~ 74 (194)
T COG5663 7 LRCCIDIDGTITDDPTF--APYLNPAFEKSLSEA--DPTDYDLHKILNIT---TEEFWKW-M---EQTEAWLYKE-ALLA 74 (194)
T ss_pred hheeeccCCceecCccc--chhccHHHHhhhhhc--ccccccHHHHhCcc---HHHHHHH-H---HHHHHHHHHH-HHHH
Confidence 35678999999997653 23334444432 111 11122222333322 3333322 2 2222222222 4467
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCC
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAY 186 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~ 186 (323)
.++...|..++++ .+++.+|..
T Consensus 75 q~v~~~L~~~~e~-~~L~~itar 96 (194)
T COG5663 75 QLVKQVLPSLKEE-HRLIYITAR 96 (194)
T ss_pred HHHHHHhHHHHhh-ceeeeeehh
Confidence 7899999999886 788889984
No 170
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=96.98 E-value=0.0038 Score=67.53 Aligned_cols=114 Identities=18% Similarity=0.238 Sum_probs=72.8
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHH
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~ 240 (323)
+++|++.+.++.|+++|+++.++|+ .....+..+-+.+|+..--.. ++++.+...- .+.
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTG---D~~~tA~~iA~~~GI~~~~~~-vi~G~~~~~l--------------~~~--- 637 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTG---DNIDTAKAIARNCGILTFGGL-AMEGKEFRRL--------------VYE--- 637 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECC---CChHHHHHHHHHcCCCCCCce-EeeHHHhhhC--------------CHH---
Confidence 6899999999999999999999999 677889999999999642222 3444333210 000
Q ss_pred HHHHHHhhHHHHHHHHHHHhhcCCCccccCC-CCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 241 ~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~-~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+...+. ++..++.. +|+.+..++ ..+++.| .-+.|+||+.||..|-++|.+...+
T Consensus 638 ---------el~~~i--------~~~~Vfar~sPe~K~~iV----~~lq~~g---~vVam~GDGvNDapALk~AdVGIAm 693 (941)
T TIGR01517 638 ---------EMDPIL--------PKLRVLARSSPLDKQLLV----LMLKDMG---EVVAVTGDGTNDAPALKLADVGFSM 693 (941)
T ss_pred ---------HHHHHh--------ccCeEEEECCHHHHHHHH----HHHHHCC---CEEEEECCCCchHHHHHhCCcceec
Confidence 000111 11112111 133344443 3444444 4688999999999999999887654
No 171
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=96.97 E-value=0.0033 Score=51.44 Aligned_cols=43 Identities=7% Similarity=-0.032 Sum_probs=31.6
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChH------------HHHHHHHHcCCC
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDR------------IARSVVEKLGSE 204 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~------------~~~~~l~~lgl~ 204 (323)
+.+++.+.|+.|+++|+.++++|+....... .+..++++.++.
T Consensus 25 ~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ip 79 (126)
T TIGR01689 25 PILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVP 79 (126)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCC
Confidence 6778888999999999999999986422212 556667776664
No 172
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=96.94 E-value=0.0015 Score=59.30 Aligned_cols=40 Identities=8% Similarity=-0.022 Sum_probs=36.5
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
++.+++++|++++++++|||+.||+.|++.+|...|.|.+
T Consensus 172 l~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~n 211 (249)
T TIGR01485 172 LQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSN 211 (249)
T ss_pred HHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECC
Confidence 7888999999999999999999999999998877777765
No 173
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.86 E-value=0.0029 Score=66.11 Aligned_cols=44 Identities=30% Similarity=0.484 Sum_probs=39.6
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccc
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 207 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~f 207 (323)
+++|++...+..||+.|++++++|+ .++..++.+-+.+|++..+
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTG---Dn~~aA~svA~~VGi~~V~ 766 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTG---DNDAAARSVAQQVGIDNVY 766 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcC---CCHHHHHHHHHhhCcceEE
Confidence 5899999999999999999999999 6789999999999966543
No 174
>PTZ00174 phosphomannomutase; Provisional
Probab=96.73 E-value=0.0047 Score=56.16 Aligned_cols=36 Identities=6% Similarity=-0.052 Sum_probs=30.0
Q ss_pred HHHHHHHcCCCCCcEEEEcC----ChhhHHHHHHcCCCEEEEcC
Q 020675 283 LRAGAEYAEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGD----s~~Di~aA~~aG~~~v~v~~ 322 (323)
++.++++ ++++++||| +.||++|-+.+|...+.|.+
T Consensus 193 l~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n 232 (247)
T PTZ00174 193 LRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKN 232 (247)
T ss_pred HHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCC
Confidence 5666666 699999999 89999999998887777754
No 175
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=96.73 E-value=0.0042 Score=67.54 Aligned_cols=42 Identities=26% Similarity=0.401 Sum_probs=37.8
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
-+++|++.+.|+.|+++|+++.++|+ .....+..+.+.+|+.
T Consensus 567 Dplr~~v~~aI~~l~~~Gi~v~~~TG---d~~~ta~~ia~~~gi~ 608 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSAGIKVIMVTG---DHPITAKAIAKGVGII 608 (997)
T ss_pred CCChHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCC
Confidence 36899999999999999999999999 5678888899999984
No 176
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=96.69 E-value=0.015 Score=53.87 Aligned_cols=48 Identities=15% Similarity=0.245 Sum_probs=35.2
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccc
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 209 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~ 209 (323)
++||+.++|+.|+++|++++++||.+..........++.+|+..-.+.
T Consensus 19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~ 66 (279)
T TIGR01452 19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQ 66 (279)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhh
Confidence 567899999999999999999999542223444456778888644443
No 177
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.61 E-value=0.0027 Score=55.59 Aligned_cols=37 Identities=14% Similarity=0.050 Sum_probs=34.4
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.++++++++++++++|||+.+|+.+++.+|+.+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 168 LQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred HHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 6888999999999999999999999999999998763
No 178
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=96.51 E-value=0.0029 Score=56.22 Aligned_cols=38 Identities=13% Similarity=0.172 Sum_probs=34.9
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
+++.+++.+|++++++++|||+.||+.|.+.+|..+++
T Consensus 190 ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am 227 (254)
T PF08282_consen 190 AIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM 227 (254)
T ss_dssp HHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE
T ss_pred HHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE
Confidence 36888999999999999999999999999999998664
No 179
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=96.50 E-value=0.0098 Score=61.81 Aligned_cols=117 Identities=15% Similarity=0.198 Sum_probs=74.5
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccc---eeechhhhhhhhhcccccccccccCcc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI---KIVGNEEVERSLYGQFVLGKGISSGVD 236 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~---~v~s~~~~~~~~~~~~~~g~~v~~~~~ 236 (323)
-||+|++++.++.+++.|+++.++|+ .+...+..+.++.|+-..-+. ..+++.+.. ++.
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITG---D~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD---------------~ls 644 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITG---DNKETAEAIAREIGIFSEDEDVSSMALTGSEFD---------------DLS 644 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHhCCCcCCccccccccchhhhh---------------cCC
Confidence 47999999999999999999999999 678999999999997443221 122222211 111
Q ss_pred hhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCC-CCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 237 EQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 237 ~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~-~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
+. .+ ...+..+..+.. .|..+.+++ +++++.| +=+-|-||+.||-.+.+.|.+
T Consensus 645 ~~------------~~-------~~~~~~~~vFaR~~P~HK~kIV----eaLq~~g---eivAMTGDGVNDApALK~AdI 698 (972)
T KOG0202|consen 645 DE------------EL-------DDAVRRVLVFARAEPQHKLKIV----EALQSRG---EVVAMTGDGVNDAPALKKADI 698 (972)
T ss_pred HH------------HH-------HHHhhcceEEEecCchhHHHHH----HHHHhcC---CEEEecCCCccchhhhhhccc
Confidence 11 00 001222222211 244455544 4455554 446789999999999999988
Q ss_pred CEEEE
Q 020675 316 PCVVM 320 (323)
Q Consensus 316 ~~v~v 320 (323)
...+=
T Consensus 699 GIAMG 703 (972)
T KOG0202|consen 699 GIAMG 703 (972)
T ss_pred ceeec
Confidence 86653
No 180
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=96.46 E-value=0.008 Score=53.39 Aligned_cols=37 Identities=16% Similarity=0.341 Sum_probs=29.5
Q ss_pred hHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 165 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 165 gv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
..++.|+.|+++|++++++|+ .....+..++..+++.
T Consensus 19 ~~~~al~~l~~~g~~~~i~TG---R~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 19 ETIEALKELQEKGIKLVIATG---RSYSSIKRLLKELGID 55 (254)
T ss_dssp HHHHHHHHHHHTTCEEEEECS---STHHHHHHHHHHTTHC
T ss_pred HHHHHHHhhcccceEEEEEcc---Ccccccccccccccch
Confidence 445567778889999999999 4567788888888877
No 181
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=96.40 E-value=0.0027 Score=57.18 Aligned_cols=37 Identities=16% Similarity=0.101 Sum_probs=33.9
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++++++++|||+.||+.|++.+|...++
T Consensus 164 l~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav 200 (236)
T TIGR02471 164 LRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVV 200 (236)
T ss_pred HHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEE
Confidence 7889999999999999999999999999999977653
No 182
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=96.28 E-value=0.0047 Score=56.31 Aligned_cols=37 Identities=14% Similarity=0.193 Sum_probs=34.6
Q ss_pred HHHHHHHcCCC--CCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 283 LRAGAEYAEKP--VRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 283 ~~~al~~lgv~--p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
++.+++++|++ .+++++|||+.||+.|.+.+|..+++
T Consensus 181 i~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam 219 (256)
T TIGR01486 181 ANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVV 219 (256)
T ss_pred HHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEe
Confidence 68889999999 99999999999999999999998775
No 183
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=96.28 E-value=0.025 Score=49.78 Aligned_cols=40 Identities=20% Similarity=0.421 Sum_probs=34.9
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
..+|++.+||+.+.+ .+.++|-|. +...++..++..+++.
T Consensus 45 ~kRP~l~eFL~~~~~-~feIvVwTA---a~~~ya~~~l~~l~~~ 84 (195)
T TIGR02245 45 LMRPYLHEFLTSAYE-DYDIVIWSA---TSMKWIEIKMTELGVL 84 (195)
T ss_pred EeCCCHHHHHHHHHh-CCEEEEEec---CCHHHHHHHHHHhccc
Confidence 379999999999998 599999999 4578999999988764
No 184
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=96.20 E-value=0.031 Score=61.23 Aligned_cols=42 Identities=19% Similarity=0.365 Sum_probs=38.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
-+++|++.+.|+.|+++|+++.++|+ .+...+..+.+.+|+.
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTG---D~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITG---DNPLTAVHVARECGIV 696 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCC
Confidence 36999999999999999999999999 6778888899999994
No 185
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=96.17 E-value=0.023 Score=52.41 Aligned_cols=49 Identities=22% Similarity=0.307 Sum_probs=40.8
Q ss_pred ChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeech
Q 020675 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 214 (323)
Q Consensus 163 ~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~ 214 (323)
.|.+.+-|.+|++.|..+++=|. |..+.+...++.+++..+|+.++..+
T Consensus 144 ~~~v~~sL~~Lk~~g~vLvLWSy---G~~eHV~~sl~~~~L~~~Fd~ii~~G 192 (297)
T PF05152_consen 144 DPAVYDSLRELKEQGCVLVLWSY---GNREHVRHSLKELKLEGYFDIIICGG 192 (297)
T ss_pred ChHHHHHHHHHHHcCCEEEEecC---CCHHHHHHHHHHhCCccccEEEEeCC
Confidence 34556677889999999999998 67899999999999999999865443
No 186
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.11 E-value=0.044 Score=48.96 Aligned_cols=43 Identities=21% Similarity=0.292 Sum_probs=35.0
Q ss_pred cCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCC
Q 020675 157 SKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 203 (323)
Q Consensus 157 ~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl 203 (323)
....++.||+.+.++.|.+. ++-+|+|. +...+++.+...+|+
T Consensus 79 E~sa~lvPgA~etm~~l~~~-~tp~v~ST---SY~qy~~r~a~~ig~ 121 (315)
T COG4030 79 ELSAKLVPGAEETMATLQER-WTPVVIST---SYTQYLRRTASMIGV 121 (315)
T ss_pred HhhcccCCChHHHHHHHhcc-CCceEEec---cHHHHHHHHHHhcCC
Confidence 34578999999999999887 66666666 578889999988887
No 187
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=96.11 E-value=0.038 Score=55.49 Aligned_cols=40 Identities=28% Similarity=0.514 Sum_probs=36.5
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCC
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 203 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl 203 (323)
+++|++.+.++.|++.|+++.++|+ .....+..+-+.+|+
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltG---D~~~~a~~ia~~lgi 386 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTG---DNVLTAKAIAKELGI 386 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCc
Confidence 6899999999999999999999999 667888888888886
No 188
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=96.04 E-value=0.017 Score=52.62 Aligned_cols=36 Identities=22% Similarity=0.332 Sum_probs=27.1
Q ss_pred HHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 167 EDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 167 ~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
.++|+.|+++|++++++|+ .....+..+++.+|+..
T Consensus 22 ~~~i~~l~~~g~~~~~~Tg---R~~~~~~~~~~~~~~~~ 57 (256)
T TIGR01486 22 KEVLERLQELGIPVIPCTS---KTAAEVEYLRKELGLED 57 (256)
T ss_pred HHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCCC
Confidence 4556777888999999998 34566777888888753
No 189
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=95.78 E-value=0.011 Score=53.60 Aligned_cols=39 Identities=5% Similarity=-0.084 Sum_probs=34.8
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHc-------CCCEEEEc
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI-------GMPCVVMR 321 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~a-------G~~~v~v~ 321 (323)
++.+++++++.+++++||||+.+|+.+++.+ |..+|.|.
T Consensus 172 ~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 172 VKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG 217 (244)
T ss_pred HHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe
Confidence 7889999999999999999999999999999 66677663
No 190
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=95.66 E-value=0.086 Score=57.88 Aligned_cols=43 Identities=21% Similarity=0.171 Sum_probs=37.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
-+++||+.+.|+.|+++|++++++|+ .....+..+....|+-.
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTG---D~~~TA~~IA~~~~ii~ 672 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTG---DKVETAINIGYSCRLLS 672 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcC---CcHHHHHHHHHHhCCCC
Confidence 36899999999999999999999999 56788888888888743
No 191
>PLN02382 probable sucrose-phosphatase
Probab=95.62 E-value=0.019 Score=56.33 Aligned_cols=40 Identities=13% Similarity=-0.046 Sum_probs=34.8
Q ss_pred HHHHHHHc---CCCCCcEEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 283 LRAGAEYA---EKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 283 ~~~al~~l---gv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
++.+++++ |++++++++|||+.||++|.+.+|...|.|.+
T Consensus 180 l~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~N 222 (413)
T PLN02382 180 LAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSN 222 (413)
T ss_pred HHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcC
Confidence 78888998 99999999999999999999999965555544
No 192
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.59 E-value=0.1 Score=51.44 Aligned_cols=89 Identities=16% Similarity=0.174 Sum_probs=59.3
Q ss_pred hHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHH
Q 020675 165 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEAR 244 (323)
Q Consensus 165 gv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~ 244 (323)
...+++..|+++|+-++|+|- +....+..++.++.- . ++-.++...-. .
T Consensus 259 ~fQ~~Ik~l~kqGVlLav~SK---N~~~da~evF~khp~-----M-iLkeedfa~~~---------i------------- 307 (574)
T COG3882 259 TFQNFIKGLKKQGVLLAVCSK---NTEKDAKEVFRKHPD-----M-ILKEEDFAVFQ---------I------------- 307 (574)
T ss_pred HHHHHHHHHHhccEEEEEecC---CchhhHHHHHhhCCC-----e-EeeHhhhhhhe---------e-------------
Confidence 344667889999999999996 567778777776532 1 22222221100 0
Q ss_pred HHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 020675 245 KAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (323)
Q Consensus 245 k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG 314 (323)
..-|..+= ++++++++|+..+..+||+|++...+--++-+
T Consensus 308 ----------------NW~~K~eN--------------irkIAkklNlg~dSmvFiDD~p~ErE~vk~~~ 347 (574)
T COG3882 308 ----------------NWDPKAEN--------------IRKIAKKLNLGLDSMVFIDDNPAERELVKREL 347 (574)
T ss_pred ----------------cCCcchhh--------------HHHHHHHhCCCccceEEecCCHHHHHHHHhcC
Confidence 00111111 78999999999999999999998877766665
No 193
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=95.32 E-value=0.77 Score=44.04 Aligned_cols=39 Identities=10% Similarity=0.068 Sum_probs=33.7
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEc
Q 020675 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMR 321 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~ 321 (323)
+|+++.+++|- .-.-++|||+...-.+|++..|+++-+.
T Consensus 413 cFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~PfwrI~ 451 (468)
T KOG3107|consen 413 CFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPFWRIS 451 (468)
T ss_pred HHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCceEeec
Confidence 49999999997 4456789999999999999999988764
No 194
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.22 E-value=0.043 Score=53.56 Aligned_cols=99 Identities=12% Similarity=0.144 Sum_probs=73.2
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHH
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLAT 241 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~ 241 (323)
+.....++.+.+.+.|.+|+++|.-= -+...++..+...|.+-+--- ++.+.+..-.
T Consensus 100 pn~~~~eL~e~ai~n~krVIlISDMY-lps~Il~~~L~s~g~d~~nip-iY~S~e~rl~--------------------- 156 (635)
T COG5610 100 PNKKNIELVEEAIKNEKRVILISDMY-LPSSILRTFLNSFGPDFNNIP-IYMSSEFRLK--------------------- 156 (635)
T ss_pred ccccchHHHHHHHhCCCeEEEEeccc-CcHHHHHHHHHhcCCCccCce-eeecceeehh---------------------
Confidence 34456789999999999999999742 355778888888888743322 3444333221
Q ss_pred HHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHHHcCCCEE
Q 020675 242 EARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQRIGMPCV 318 (323)
Q Consensus 242 ~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~~aG~~~v 318 (323)
|-+-.. |..+++.-+++|.+.+++||.. .|+..+++.|+.|.
T Consensus 157 ---------------------KnSg~L--------------Fk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tl 199 (635)
T COG5610 157 ---------------------KNSGNL--------------FKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTL 199 (635)
T ss_pred ---------------------cccchH--------------HHHHHhhcCCChhheEEecCchhhhhcCccccchhHH
Confidence 333333 8999999999999999999975 69999999999764
No 195
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=95.11 E-value=0.053 Score=49.31 Aligned_cols=53 Identities=30% Similarity=0.542 Sum_probs=39.5
Q ss_pred HHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCC
Q 020675 148 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 203 (323)
Q Consensus 148 ~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl 203 (323)
.+...+.+....+.+++|+.++++.|.++++|+.|.|. +-...++.+++..+.
T Consensus 77 k~~i~~~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSA---GlgdvI~~vL~q~~~ 129 (246)
T PF05822_consen 77 KSEIEEAVKESDIMLRDGVEEFFDKLEEHNIPLLIFSA---GLGDVIEEVLRQAGV 129 (246)
T ss_dssp GGGHHHHHHCS---B-BTHHHHHHHHHCTT--EEEEEE---EEHHHHHHHHHHTT-
T ss_pred HHHHHHHHHhcchhhhcCHHHHHHHHHhcCCCEEEEeC---CcHHHHHHHHHHcCC
Confidence 34556666667788999999999999999999999999 788999999998754
No 196
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=94.56 E-value=0.2 Score=51.05 Aligned_cols=140 Identities=17% Similarity=0.209 Sum_probs=84.4
Q ss_pred ceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhHHHHHHHHHhcCCCCCC
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDAPLR 163 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~ 163 (323)
-|.||=|+||||+.++.+ -.++-..|.+| + .
T Consensus 530 ~kIVISDIDGTITKSDvL------Gh~lp~iGkDW---T----------------------------------------h 560 (738)
T KOG2116|consen 530 DKIVISDIDGTITKSDVL------GHVLPMIGKDW---T----------------------------------------H 560 (738)
T ss_pred CcEEEecCCCceEhhhhh------hhhhhhhcCcc---h----------------------------------------h
Confidence 468999999999988765 34444455542 1 1
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcc--ccc-eeechhhhhhhhhcccccccccccCcchhHH
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI--SKI-KIVGNEEVERSLYGQFVLGKGISSGVDEQLA 240 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~--fd~-~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~ 240 (323)
-||..+...++++||++..+|....+....++..|..+.-+.+ -+. ++++.+.. -+.+
T Consensus 561 ~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd~l------------------f~Al- 621 (738)
T KOG2116|consen 561 TGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPDSL------------------FAAL- 621 (738)
T ss_pred hhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCCcc------------------hHHH-
Confidence 1666677778899999999998665555667777776654432 121 12222211 1112
Q ss_pred HHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcE-EEEcCChhhHHHHHHcCCCE
Q 020675 241 TEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNC-FLIAGSQSGVAGAQRIGMPC 317 (323)
Q Consensus 241 ~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~-v~VGDs~~Di~aA~~aG~~~ 317 (323)
.++|. .+||+. =.|+|+..+.+-+.-+.+-- .-||...+|+..=+++|++.
T Consensus 622 --------------~REVI-~RkPe~-----------FKIAcL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgVP~ 673 (738)
T KOG2116|consen 622 --------------HREVI-ERKPEV-----------FKIACLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGVPL 673 (738)
T ss_pred --------------HHHHH-HcCchh-----------hhHHHHHHHHHhcCCCCCceeeecCCCcccceeeeeecCCc
Confidence 22222 234442 23566777777776333322 24788999999999999864
No 197
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=94.50 E-value=0.3 Score=45.88 Aligned_cols=35 Identities=26% Similarity=0.482 Sum_probs=21.8
Q ss_pred cCCCcccccCCCCCCCCCCCceEEEEecCCccccccc
Q 020675 64 VNPFSAFSSSSGHDSQNPPRDLAVLLEVDGVLVDAYR 100 (323)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~kaViFD~DGTLid~~~ 100 (323)
.++.+.||+..+. .+++ +.-++.||+||||+--..
T Consensus 17 r~~~~kf~~~~s~-~ss~-~~fgfafDIDGVL~RG~~ 51 (389)
T KOG1618|consen 17 RPPMRKFISEISF-ESSP-PTFGFAFDIDGVLFRGHR 51 (389)
T ss_pred CCchhhhhcccCC-CCCC-CceeEEEecccEEEecCC
Confidence 3556666655442 2223 334899999999986543
No 198
>PLN03190 aminophospholipid translocase; Provisional
Probab=94.49 E-value=0.54 Score=52.17 Aligned_cols=42 Identities=24% Similarity=0.239 Sum_probs=35.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
-++++|+.+.++.|+++|+++.++|+ .....+..+-...|+-
T Consensus 725 D~lr~~v~~~I~~l~~agi~v~mlTG---D~~~tAi~IA~s~~Ll 766 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTAGIKVWVLTG---DKQETAISIGYSSKLL 766 (1178)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHHhCCC
Confidence 36999999999999999999999999 5567777777766763
No 199
>PRK10444 UMP phosphatase; Provisional
Probab=94.43 E-value=0.33 Score=44.30 Aligned_cols=52 Identities=19% Similarity=0.410 Sum_probs=38.1
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeech
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGN 214 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~ 214 (323)
+.||+.++|+.|+++|++++++||.+..........++.+|++--.+. ++++
T Consensus 18 ~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~-i~ts 69 (248)
T PRK10444 18 AVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSV-FYTS 69 (248)
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhh-EecH
Confidence 578999999999999999999999764344555666777888533343 3444
No 200
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=94.40 E-value=0.1 Score=49.42 Aligned_cols=128 Identities=16% Similarity=0.126 Sum_probs=70.9
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHc---CCCccccceeechhhhhhhhhcccccccccccCcchh
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL---GSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQ 238 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~l---gl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~ 238 (323)
--|....+|+.|+++|-++.++|| ++...+..-+..+ ++.++||++|+-++. . ..|+..- .-++..|+.
T Consensus 241 r~~ql~~fl~kL~~~GKklFLiTN---SPysFVd~GM~flvG~~WRdlFDVVIvqA~K-P-~Fftde~---rPfR~~dek 312 (510)
T KOG2470|consen 241 RNPQLLAFLRKLKDHGKKLFLITN---SPYSFVDKGMRFLVGDDWRDLFDVVIVQANK-P-EFFTDER---RPFRKYDEK 312 (510)
T ss_pred ccHHHHHHHHHHHHhcCcEEEEeC---CchhhhhcCceeeeCccHHhhhheeEEecCC-C-ccccccc---Ccchhhccc
Confidence 346788999999999999999999 4556666555442 356889987654321 1 0111000 000000000
Q ss_pred HHHHHHHHhhHHHHHHHHHHHhhcCCCcc-ccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCCh-hhHHHHH-HcCC
Q 020675 239 LATEARKAVSAQKQEIAEEVASMLKLSVD-IDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQ-SGVAGAQ-RIGM 315 (323)
Q Consensus 239 ~~~~~~k~~s~~~~~i~~~v~~~~KP~p~-i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~-~Di~aA~-~aG~ 315 (323)
.-+ -..+.|- |-++. || .++. +...++--|..-.+++++||.. +|+..-. +.||
T Consensus 313 -------~~s----l~wdkv~---klekgkiY------y~G~---l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgW 369 (510)
T KOG2470|consen 313 -------RGS----LLWDKVD---KLEKGKIY------YQGN---LKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGW 369 (510)
T ss_pred -------ccc----hhhhhhh---hcccCcee------eecc---HHHHHHHhccCCCeeEEecCcchhhhhhhHhhccc
Confidence 000 0011111 21111 10 1111 3445566677778999999996 6988876 8999
Q ss_pred CEEEE
Q 020675 316 PCVVM 320 (323)
Q Consensus 316 ~~v~v 320 (323)
++-.+
T Consensus 370 RTgAI 374 (510)
T KOG2470|consen 370 RTGAI 374 (510)
T ss_pred ccccc
Confidence 87654
No 201
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=94.30 E-value=0.44 Score=43.55 Aligned_cols=25 Identities=8% Similarity=0.070 Sum_probs=22.6
Q ss_pred EEEcCChhhHHHHHHcCCCEEEEcCC
Q 020675 298 FLIAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 298 v~VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
||++|....++.|. .+++++.|..|
T Consensus 236 IFFDDQ~~H~~~a~-~~vps~hVP~g 260 (264)
T PF06189_consen 236 IFFDDQDGHLESAS-KVVPSGHVPYG 260 (264)
T ss_pred EeecCchhhhhHhh-cCCCEEeccCC
Confidence 99999999999999 88999998765
No 202
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=93.83 E-value=0.12 Score=49.67 Aligned_cols=25 Identities=32% Similarity=0.542 Sum_probs=19.3
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCC
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAY 186 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~ 186 (323)
++|.+..=|..|.+.||.++|.||.
T Consensus 105 l~~~vp~Klktl~~~g~~l~iftnq 129 (422)
T KOG2134|consen 105 LFPEVPSKLKTLYQDGIKLFIFTNQ 129 (422)
T ss_pred eccccchhhhhhccCCeEEEEEecc
Confidence 4455556677888899999999984
No 203
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=93.70 E-value=0.1 Score=51.82 Aligned_cols=44 Identities=16% Similarity=0.382 Sum_probs=37.7
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccc
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd 208 (323)
..||++|=+++||+-|++.+.+|+ .+.-.+..+-...|++++..
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TG---DN~~TAa~IA~EAGVDdfiA 491 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITG---DNPLTAAAIAAEAGVDDFIA 491 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeC---CCHHHHHHHHHHhCchhhhh
Confidence 568999999999999999999999 56777888888889887543
No 204
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=93.68 E-value=0.14 Score=46.83 Aligned_cols=53 Identities=13% Similarity=0.159 Sum_probs=39.6
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechh
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNE 215 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~ 215 (323)
+.||+.++|+.|+++|++++++||.+..........++.+|++--.+. ++++.
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~-i~ts~ 74 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDE-VFTPA 74 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHH-eEcHH
Confidence 577999999999999999999999654333456777888998643444 34443
No 205
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=93.67 E-value=0.78 Score=38.65 Aligned_cols=32 Identities=13% Similarity=0.140 Sum_probs=28.8
Q ss_pred CCCCcEEEEcCCh-hhHHHHHHcCCCEEEEcCC
Q 020675 292 KPVRNCFLIAGSQ-SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 292 v~p~~~v~VGDs~-~Di~aA~~aG~~~v~v~~g 323 (323)
..+++++||||.. .||..|...|-..||...|
T Consensus 137 ~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~g 169 (190)
T KOG2961|consen 137 CTSSELIMVGDRLFTDIVYANRMGSLGVWTEPG 169 (190)
T ss_pred CChhHeEEEccchhhhHhhhhhccceeEEeccc
Confidence 5799999999996 7999999999999998754
No 206
>PLN02423 phosphomannomutase
Probab=93.19 E-value=0.076 Score=48.32 Aligned_cols=35 Identities=6% Similarity=-0.033 Sum_probs=29.9
Q ss_pred HHHcCCCCCcEEEEcC----ChhhHHHHHHcCCCEEEEcC
Q 020675 287 AEYAEKPVRNCFLIAG----SQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 287 l~~lgv~p~~~v~VGD----s~~Di~aA~~aG~~~v~v~~ 322 (323)
++.+. +++++++||| +.||++|.+.-|+.++-|++
T Consensus 194 l~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 194 LQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred HHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 34444 9999999999 79999999999999988864
No 207
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=93.16 E-value=0.61 Score=42.30 Aligned_cols=41 Identities=17% Similarity=0.126 Sum_probs=37.1
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 282 ALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 282 ~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
+|+.+.+++|-+.-.-++|||+..--.+|+..+|+++-|..
T Consensus 218 cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw~I~~ 258 (274)
T TIGR01658 218 CFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFVKIDL 258 (274)
T ss_pred HHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeEEeec
Confidence 49999999998778889999999999999999999998764
No 208
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=92.39 E-value=0.14 Score=42.41 Aligned_cols=115 Identities=15% Similarity=0.146 Sum_probs=63.9
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCCCCCCHHHHHHHHcccCCcHHHHHHHHHhHHHHHHHHHhcCCCC
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDCANWTAPIYTDLLRKSAGDEDRMLVLFFNRKNALDEFLASKDAP 161 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 161 (323)
|..|.+..|||-||.|.... |...++ +.+..++.........+..+....-+....++. ...+.. .+.
T Consensus 1 m~kk~iaIDmD~vLadll~e-wv~~~N-~y~D~~lk~~di~gwdik~yv~~~~g~i~~il~-----ep~fFR-----nL~ 68 (180)
T COG4502 1 MNKKTIAIDMDTVLADLLRE-WVKRYN-IYKDKLLKMSDIKGWDIKNYVKPECGKIYDILK-----EPHFFR-----NLG 68 (180)
T ss_pred CCCceEEeeHHHHHHHHHHH-HHHHhh-hccccCcChHhhcccchhhccCccCCeeeeecc-----Ccchhh-----hcC
Confidence 45678999999999998874 666666 444444441111111111111111111111110 011111 366
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCC---CCChHHHHHHHHHcCCCccccc
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYG---KSGDRIARSVVEKLGSERISKI 209 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~---~~~~~~~~~~l~~lgl~~~fd~ 209 (323)
..|++.+++++|-+. +.++|+|.+. ++...-.+-+.+.+.+-.+-.+
T Consensus 69 V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~ 118 (180)
T COG4502 69 VQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNI 118 (180)
T ss_pred ccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhhE
Confidence 899999999999987 9999999752 2223344455666776665544
No 209
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=92.15 E-value=0.8 Score=45.77 Aligned_cols=33 Identities=9% Similarity=0.015 Sum_probs=26.9
Q ss_pred HHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH-cCCCc
Q 020675 169 FVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSER 205 (323)
Q Consensus 169 lL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~-lgl~~ 205 (323)
.++..+..| +++|+|. +++..++..++. +|.+.
T Consensus 101 ~~~~~~~~g-~~vVVTA---sPrvmVEpFake~LG~D~ 134 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTR---MPRVMVERFAKEHLRADE 134 (498)
T ss_pred HHHHHHcCC-eEEEEeC---CHHHHHHHHHHHhcCCce
Confidence 455666778 9999998 688999999988 88765
No 210
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=91.96 E-value=0.33 Score=53.11 Aligned_cols=42 Identities=21% Similarity=0.214 Sum_probs=34.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
-++.+||.|.|+.|+++|++++++|+ ...+.+-.+.-..++.
T Consensus 650 DkLQdgVPetI~~L~~AGIKIWVLTG---DK~ETAiNIg~sC~Ll 691 (1151)
T KOG0206|consen 650 DKLQDGVPETIAKLAQAGIKIWVLTG---DKQETAINIGYSCRLL 691 (1151)
T ss_pred chhccCchHHHHHHHHcCCEEEEEcC---cHHHHHHHHHHhhcCC
Confidence 35889999999999999999999999 4566666666666654
No 211
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=91.13 E-value=0.87 Score=48.02 Aligned_cols=43 Identities=26% Similarity=0.430 Sum_probs=38.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
-|.+||+++.++.++.+|+++-.+|+ .+-..++.+....|+..
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTG---DNI~TAkAIA~eCGILt 688 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTG---DNINTAKAIARECGILT 688 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeC---CcHHHHHHHHHHccccc
Confidence 36899999999999999999999999 67788889999999853
No 212
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=90.93 E-value=0.49 Score=49.87 Aligned_cols=30 Identities=13% Similarity=0.086 Sum_probs=25.8
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG 314 (323)
.+.+++ +++++.+++|||+.||+.|.+.++
T Consensus 662 l~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~ 691 (726)
T PRK14501 662 VRRLLE--AGPYDFVLAIGDDTTDEDMFRALP 691 (726)
T ss_pred HHHHHh--cCCCCEEEEECCCCChHHHHHhcc
Confidence 566666 788999999999999999999874
No 213
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=90.82 E-value=1 Score=44.08 Aligned_cols=34 Identities=9% Similarity=0.093 Sum_probs=25.3
Q ss_pred HHHHHHHcCCCCCcEE-EEcCChhhHHHHHHcCCC
Q 020675 283 LRAGAEYAEKPVRNCF-LIAGSQSGVAGAQRIGMP 316 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v-~VGDs~~Di~aA~~aG~~ 316 (323)
|..-++.+..++.--+ -+|....|+.+-+++|++
T Consensus 482 yLndl~slf~e~~PFyAGFGNriTDvisY~~vgIp 516 (580)
T COG5083 482 YLNDLKSLFIEFDPFYAGFGNRITDVISYSNVGIP 516 (580)
T ss_pred HHHHHHHhhCcCChhhccccccchhheeeccccCC
Confidence 5555666666666444 588889999999999886
No 214
>PLN02580 trehalose-phosphatase
Probab=90.48 E-value=0.7 Score=44.92 Aligned_cols=31 Identities=10% Similarity=-0.061 Sum_probs=26.0
Q ss_pred HHHHHHHHcCCCCCc---EEEEcCChhhHHHHHH
Q 020675 282 ALRAGAEYAEKPVRN---CFLIAGSQSGVAGAQR 312 (323)
Q Consensus 282 ~~~~al~~lgv~p~~---~v~VGDs~~Di~aA~~ 312 (323)
+.+.+++.+|++..+ .++|||..+|..|.+.
T Consensus 305 Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~ 338 (384)
T PLN02580 305 AVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKV 338 (384)
T ss_pred HHHHHHHhcCCCcccceeEEEECCCchHHHHHHh
Confidence 368889999988764 3899999999999886
No 215
>PLN03017 trehalose-phosphatase
Probab=90.45 E-value=0.76 Score=44.34 Aligned_cols=31 Identities=10% Similarity=-0.128 Sum_probs=24.1
Q ss_pred HHHHHHHcCCCC---CcEEEEcCChhhHHHHHHc
Q 020675 283 LRAGAEYAEKPV---RNCFLIAGSQSGVAGAQRI 313 (323)
Q Consensus 283 ~~~al~~lgv~p---~~~v~VGDs~~Di~aA~~a 313 (323)
.+.+++.+|... .-.+||||-.+|-.+.+.+
T Consensus 288 v~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L 321 (366)
T PLN03017 288 LEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKML 321 (366)
T ss_pred HHHHHHhcccccCCCceEEEeCCCCccHHHHHHH
Confidence 678888888653 3489999999888777755
No 216
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.78 E-value=1.1 Score=40.92 Aligned_cols=54 Identities=31% Similarity=0.519 Sum_probs=42.1
Q ss_pred HHHHHHHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH-cCCC
Q 020675 148 KNALDEFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK-LGSE 204 (323)
Q Consensus 148 ~~~~~~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~-lgl~ 204 (323)
.....+.+....+.+++|..++.+.|+++++++.|.|. +.-..++.++.. .++.
T Consensus 125 k~~I~~~Va~s~i~lReg~~~ff~~L~~~~IP~~iFSA---GigdiiEev~~q~~~~~ 179 (298)
T KOG3128|consen 125 KNAIDDIVAESNIALREGYEEFFEALQAHEIPLLIFSA---GIGDIIEEVTRQKLVLH 179 (298)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCceEEEec---chHHHHHHHHHHHhccC
Confidence 45666666666678999999999999999999999999 556677766654 4443
No 217
>PLN02151 trehalose-phosphatase
Probab=89.66 E-value=0.83 Score=43.88 Aligned_cols=31 Identities=10% Similarity=-0.095 Sum_probs=22.9
Q ss_pred HHHHHHHcCCCCC---cEEEEcCChhhHHHHHHc
Q 020675 283 LRAGAEYAEKPVR---NCFLIAGSQSGVAGAQRI 313 (323)
Q Consensus 283 ~~~al~~lgv~p~---~~v~VGDs~~Di~aA~~a 313 (323)
.+.+++.++..-. =.+||||-.+|-.+.+.+
T Consensus 274 v~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L 307 (354)
T PLN02151 274 LEFLLESLGYANCTDVFPIYIGDDRTDEDAFKIL 307 (354)
T ss_pred HHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHH
Confidence 6777888876532 279999999887776644
No 218
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=89.04 E-value=0.2 Score=43.40 Aligned_cols=16 Identities=31% Similarity=0.484 Sum_probs=14.6
Q ss_pred CceEEEEecCCccccc
Q 020675 83 RDLAVLLEVDGVLVDA 98 (323)
Q Consensus 83 ~~kaViFD~DGTLid~ 98 (323)
.+|+|+||+||||++.
T Consensus 20 ~ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 20 NIRLLICDVDGVFSDG 35 (183)
T ss_pred CceEEEEcCCeeeecC
Confidence 4899999999999986
No 219
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=88.42 E-value=1.2 Score=41.02 Aligned_cols=32 Identities=3% Similarity=-0.105 Sum_probs=23.8
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG 314 (323)
++.++++.+....-+++.||-..|=.+...+.
T Consensus 187 ~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 187 IKYIMDELPFDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred HHHHHhcCCCCCCcceecCCCCccHHHHHhhc
Confidence 67778888776666899999988766665554
No 220
>PTZ00174 phosphomannomutase; Provisional
Probab=87.93 E-value=0.59 Score=42.38 Aligned_cols=36 Identities=22% Similarity=0.323 Sum_probs=24.3
Q ss_pred CCCceEEEEecCCccccccccchHHHHHHHHHH---cCCC
Q 020675 81 PPRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQK---LGLD 117 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~---~g~~ 117 (323)
.|.+|.|+||+||||++.... ......+++++ .|+.
T Consensus 2 ~~~~klia~DlDGTLL~~~~~-is~~~~~ai~~l~~~Gi~ 40 (247)
T PTZ00174 2 EMKKTILLFDVDGTLTKPRNP-ITQEMKDTLAKLKSKGFK 40 (247)
T ss_pred CCCCeEEEEECcCCCcCCCCC-CCHHHHHHHHHHHHCCCE
Confidence 477999999999999987653 33334444433 4554
No 221
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=87.82 E-value=1.1 Score=41.22 Aligned_cols=41 Identities=20% Similarity=0.204 Sum_probs=33.8
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccc
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 207 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~f 207 (323)
+.+.++|+.|+++|++++++|+ .....+...++.+|+..++
T Consensus 24 ~~~~~ai~~l~~~Gi~~~iaTg---R~~~~~~~~~~~l~l~~~~ 64 (273)
T PRK00192 24 EPAKPALKALKEKGIPVIPCTS---KTAAEVEVLRKELGLEDPF 64 (273)
T ss_pred HHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCCCE
Confidence 4567788999999999999999 4567788899999987644
No 222
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=87.59 E-value=1.1 Score=43.38 Aligned_cols=122 Identities=11% Similarity=-0.013 Sum_probs=68.3
Q ss_pred HHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH---cCCCccccceeechhhhhhhhhcccccccccccCcchhHHHH
Q 020675 166 VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK---LGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATE 242 (323)
Q Consensus 166 v~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~---lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~ 242 (323)
...+|..+++.|-++-++||+ ...++...+.. .++..+|+++++.+.-- .-...+.++ ...++.
T Consensus 203 ~v~~l~~~r~sGKk~fl~Tns---~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp-~ff~e~~vl-----reV~t~---- 269 (424)
T KOG2469|consen 203 IVPLLSMLRDSGKKTFLHTNS---DWDYTDIFMAFHYGFDWETYFDLVETRAAKP-GFFHEGTVL-----REVEPQ---- 269 (424)
T ss_pred cccchHHHHhhccceEEeecc---ccchhhHHHHHHhCCCcceeEEEEEEeccCC-cccccccee-----eeeccc----
Confidence 344899999999999999994 34444444433 46889999876654211 000011100 000000
Q ss_pred HHHHhhHHHHHHHHHHHhhcCCCccccCCC----CchhHHHHHHHHHHHHHcCCCCCcEEEEcCChh-hH-HHHHHcCCC
Q 020675 243 ARKAVSAQKQEIAEEVASMLKLSVDIDTSS----PESLDKIVAALRAGAEYAEKPVRNCFLIAGSQS-GV-AGAQRIGMP 316 (323)
Q Consensus 243 ~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~----~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~-Di-~aA~~aG~~ 316 (323)
..||.+..+++. ..++-+. ...+++.+++.-.++++|||... || ..-+.-|++
T Consensus 270 ------------------~g~l~~g~~~~p~e~~~~ySggs---~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wr 328 (424)
T KOG2469|consen 270 ------------------EGLLKNGDNTGPLEQGGVYSGGS---LKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWR 328 (424)
T ss_pred ------------------cccccccccCCcchhcccCCcch---HHHHHHHhcccccceeecccceeeeEEecceecceE
Confidence 012222211110 0111111 56778888888899999999864 64 445667888
Q ss_pred EEEEc
Q 020675 317 CVVMR 321 (323)
Q Consensus 317 ~v~v~ 321 (323)
+++|.
T Consensus 329 t~lv~ 333 (424)
T KOG2469|consen 329 TVLVA 333 (424)
T ss_pred EEEEe
Confidence 88764
No 223
>PLN02423 phosphomannomutase
Probab=86.86 E-value=0.72 Score=41.87 Aligned_cols=30 Identities=13% Similarity=0.202 Sum_probs=19.4
Q ss_pred CceEEE-EecCCccccccccchHHHHHHHHHH
Q 020675 83 RDLAVL-LEVDGVLVDAYRFGNRQAFNVAFQK 113 (323)
Q Consensus 83 ~~kaVi-FD~DGTLid~~~~~~~~a~~~~~~~ 113 (323)
.+|+++ |||||||++.... ......+++++
T Consensus 5 ~~~~i~~~D~DGTLl~~~~~-i~~~~~~ai~~ 35 (245)
T PLN02423 5 KPGVIALFDVDGTLTAPRKE-ATPEMLEFMKE 35 (245)
T ss_pred ccceEEEEeccCCCcCCCCc-CCHHHHHHHHH
Confidence 456555 9999999987653 33444454444
No 224
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=85.86 E-value=1.8 Score=46.47 Aligned_cols=28 Identities=11% Similarity=-0.092 Sum_probs=24.9
Q ss_pred HHHcCCCCCcEEEEcCChhhHHHHHHcC
Q 020675 287 AEYAEKPVRNCFLIAGSQSGVAGAQRIG 314 (323)
Q Consensus 287 l~~lgv~p~~~v~VGDs~~Di~aA~~aG 314 (323)
++.+|+.++.+++|||..+|..|.+.++
T Consensus 774 ~~~~g~~~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 774 MQERGMLPDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred HHhcCCCcccEEEEcCCccHHHHHHHhh
Confidence 3567999999999999999999998876
No 225
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=85.73 E-value=3.6 Score=33.58 Aligned_cols=47 Identities=15% Similarity=0.140 Sum_probs=39.1
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd 208 (323)
+..+++++..|.+|++.|+.++++|++. ....+...|+.+.+...+.
T Consensus 43 ~~fY~Di~rIL~dLk~~GVtl~~ASRt~--ap~iA~q~L~~fkvk~~Gv 89 (144)
T KOG4549|consen 43 MIFYDDIRRILVDLKKLGVTLIHASRTM--APQIASQGLETFKVKQTGV 89 (144)
T ss_pred eeeccchhHHHHHHHhcCcEEEEecCCC--CHHHHHHHHHHhccCcccc
Confidence 4478899999999999999999999963 4688889999888765443
No 226
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=84.80 E-value=5.7 Score=37.51 Aligned_cols=43 Identities=28% Similarity=0.363 Sum_probs=31.2
Q ss_pred CChhHHHHHHHHHHC----CCcEEEEcCCCCCChHH-HHHHHHHcCCC
Q 020675 162 LRPGVEDFVDDAYNE----GIPLIVLTAYGKSGDRI-ARSVVEKLGSE 204 (323)
Q Consensus 162 l~pgv~elL~~Lk~~----Gi~l~ivTn~~~~~~~~-~~~~l~~lgl~ 204 (323)
+.||+.++++.|+.+ |+++.++||.+...... +..+.+.+|++
T Consensus 17 ~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 17 PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 477889999999988 99999999954222333 44444778875
No 227
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=84.68 E-value=2.4 Score=36.37 Aligned_cols=32 Identities=22% Similarity=0.396 Sum_probs=22.9
Q ss_pred HHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcCC
Q 020675 287 AEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 287 l~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
+..-|++ ++||++.. ...|++.|++++.+.+|
T Consensus 121 ~~~~G~~----viVGg~~~-~~~A~~~gl~~v~i~sg 152 (176)
T PF06506_consen 121 AKAEGVD----VIVGGGVV-CRLARKLGLPGVLIESG 152 (176)
T ss_dssp HHHTT------EEEESHHH-HHHHHHTTSEEEESS--
T ss_pred HHHcCCc----EEECCHHH-HHHHHHcCCcEEEEEec
Confidence 3445654 88999865 78899999999998764
No 228
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=84.55 E-value=1.7 Score=45.78 Aligned_cols=153 Identities=13% Similarity=0.129 Sum_probs=77.8
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceee-chhhhhhhhhcccccccccc---cCc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIV-GNEEVERSLYGQFVLGKGIS---SGV 235 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~-s~~~~~~~~~~~~~~g~~v~---~~~ 235 (323)
.++.|++++.|+.|.+.+++++.+|+ .+.-.+..+-+.+|+-.--..++. ..++..+...+.-+.|..+. .+.
T Consensus 674 CPlK~Ds~~~I~el~~SSH~vvMITG---DnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~ 750 (1160)
T KOG0209|consen 674 CPLKPDSKKTIKELNNSSHRVVMITG---DNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGK 750 (1160)
T ss_pred CCCCccHHHHHHHHhccCceEEEEeC---CCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCc
Confidence 67899999999999999999999998 455556666666776332111111 11101111111111111110 000
Q ss_pred ch--hHHHHHHHHhhHHHHH-HHHHHHhhcCCCccccCC-CCchhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHH
Q 020675 236 DE--QLATEARKAVSAQKQE-IAEEVASMLKLSVDIDTS-SPESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQ 311 (323)
Q Consensus 236 ~~--~~~~~~~k~~s~~~~~-i~~~v~~~~KP~p~i~~~-~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~ 311 (323)
.. ...+-+.+-.+..-.. .........=|+..+|.. .|+-+|.++. -++.+| ..++|.||+.||+-|.+
T Consensus 751 ~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~----tlK~~G---y~TLMCGDGTNDVGALK 823 (1160)
T KOG0209|consen 751 KKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIIT----TLKKLG---YVTLMCGDGTNDVGALK 823 (1160)
T ss_pred cchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHH----HHHhcC---eEEEEecCCCcchhhhh
Confidence 00 0000000000000000 000111223455555442 2555555543 345666 45899999999999999
Q ss_pred HcCCCEEEEcC
Q 020675 312 RIGMPCVVMRS 322 (323)
Q Consensus 312 ~aG~~~v~v~~ 322 (323)
.|...+.++.+
T Consensus 824 ~AhVGVALL~~ 834 (1160)
T KOG0209|consen 824 QAHVGVALLNN 834 (1160)
T ss_pred hcccceehhcC
Confidence 99998877654
No 229
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=84.41 E-value=0.5 Score=36.82 Aligned_cols=31 Identities=23% Similarity=0.252 Sum_probs=19.0
Q ss_pred EEEecCCcccccccc-chHHHHHHHHHHcCCC
Q 020675 87 VLLEVDGVLVDAYRF-GNRQAFNVAFQKLGLD 117 (323)
Q Consensus 87 ViFD~DGTLid~~~~-~~~~a~~~~~~~~g~~ 117 (323)
++||+||||++.... .....+-+.+++.|.+
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~g~~ 32 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRERGKP 32 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHTTSE
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHcCCC
Confidence 689999999986543 1122333445555664
No 230
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=84.18 E-value=2.3 Score=37.46 Aligned_cols=36 Identities=19% Similarity=0.315 Sum_probs=30.8
Q ss_pred HHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 166 VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 166 v~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
.+++|+.|+++|++++++|+ .....+..+++.+++.
T Consensus 21 ~~~~l~~l~~~gi~~~i~Tg---R~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTS---KTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCC
Confidence 45678889999999999999 5678888899999986
No 231
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=83.35 E-value=2.4 Score=37.28 Aligned_cols=41 Identities=20% Similarity=0.280 Sum_probs=32.6
Q ss_pred ChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcc
Q 020675 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206 (323)
Q Consensus 163 ~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~ 206 (323)
.|...+.|++|+++|++++++|+. +...+..+.+.++++.+
T Consensus 20 ~~~~~~~i~~l~~~g~~~~~~TGR---~~~~~~~~~~~l~~~~~ 60 (215)
T TIGR01487 20 SERAIEAIRKAEKKGIPVSLVTGN---TVPFARALAVLIGTSGP 60 (215)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCC---cchhHHHHHHHhCCCCc
Confidence 346677889999999999999994 45677788888887643
No 232
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=81.09 E-value=14 Score=37.61 Aligned_cols=32 Identities=13% Similarity=0.054 Sum_probs=25.2
Q ss_pred HHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcCC
Q 020675 287 AEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 287 l~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
++..|++ ++|||... ...|+++||+.|++.++
T Consensus 141 l~~~G~~----~viG~~~~-~~~A~~~gl~~ili~s~ 172 (526)
T TIGR02329 141 LRARGIG----AVVGAGLI-TDLAEQAGLHGVFLYSA 172 (526)
T ss_pred HHHCCCC----EEECChHH-HHHHHHcCCceEEEecH
Confidence 4556664 78899955 67899999999998763
No 233
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=80.95 E-value=3.3 Score=36.50 Aligned_cols=40 Identities=23% Similarity=0.243 Sum_probs=31.2
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcc
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~ 206 (323)
|...+.|++|+++|++++++|++ +...+..+++.+++..+
T Consensus 23 ~~~~~al~~l~~~G~~~~iaTGR---~~~~~~~~~~~l~~~~~ 62 (230)
T PRK01158 23 LKAVEAIRKAEKLGIPVILATGN---VLCFARAAAKLIGTSGP 62 (230)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCC---chHHHHHHHHHhCCCCc
Confidence 35566788899999999999994 45667777888888653
No 234
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=80.53 E-value=3.7 Score=37.08 Aligned_cols=38 Identities=13% Similarity=0.329 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 165 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 165 gv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
...+.|++|+++|++++++|+. ....+...++.+++..
T Consensus 20 ~~~~~i~~l~~~G~~~~iaTGR---~~~~~~~~~~~~~~~~ 57 (256)
T TIGR00099 20 STKEALAKLREKGIKVVLATGR---PYKEVKNILKELGLDT 57 (256)
T ss_pred HHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCCCC
Confidence 4566788899999999999994 4567777888888763
No 235
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=80.02 E-value=4.4 Score=36.79 Aligned_cols=38 Identities=16% Similarity=0.208 Sum_probs=30.1
Q ss_pred hHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 165 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 165 gv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
...+.|++|+++|++++++|++ +...+..+++.++++.
T Consensus 24 ~~~~ai~~l~~~G~~~~iaTGR---~~~~~~~~~~~l~~~~ 61 (270)
T PRK10513 24 AVKQAIAAARAKGVNVVLTTGR---PYAGVHRYLKELHMEQ 61 (270)
T ss_pred HHHHHHHHHHHCCCEEEEecCC---ChHHHHHHHHHhCCCC
Confidence 3456788899999999999994 4566777888888864
No 236
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=79.87 E-value=3.8 Score=37.34 Aligned_cols=39 Identities=10% Similarity=0.006 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcc
Q 020675 165 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERI 206 (323)
Q Consensus 165 gv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~ 206 (323)
..++.|++|+++|++++++|++ ....+..+++.+++..+
T Consensus 23 ~~~~ai~~l~~~G~~~~iaTGR---~~~~~~~~~~~l~~~~~ 61 (272)
T PRK15126 23 KTLSTLARLRERDITLTFATGR---HVLEMQHILGALSLDAY 61 (272)
T ss_pred HHHHHHHHHHHCCCEEEEECCC---CHHHHHHHHHHcCCCCc
Confidence 4456788899999999999994 45677788888988643
No 237
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=79.57 E-value=11 Score=35.31 Aligned_cols=40 Identities=20% Similarity=0.351 Sum_probs=32.1
Q ss_pred cCCCCCChhHHHHHHHHHHCC-CcEEEEcCCCCCChHHHHHHHHHcC
Q 020675 157 SKDAPLRPGVEDFVDDAYNEG-IPLIVLTAYGKSGDRIARSVVEKLG 202 (323)
Q Consensus 157 ~~~~~l~pgv~elL~~Lk~~G-i~l~ivTn~~~~~~~~~~~~l~~lg 202 (323)
.+...++|..-++++.+++.| ++++|+||++ . ..+++.+.
T Consensus 88 ~GEPTLy~~L~elI~~~k~~g~~~tflvTNgs---l---pdv~~~L~ 128 (296)
T COG0731 88 SGEPTLYPNLGELIEEIKKRGKKTTFLVTNGS---L---PDVLEELK 128 (296)
T ss_pred CCCcccccCHHHHHHHHHhcCCceEEEEeCCC---h---HHHHHHhc
Confidence 455679999999999999999 7999999942 2 55566655
No 238
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=79.36 E-value=1.1 Score=40.43 Aligned_cols=15 Identities=27% Similarity=0.503 Sum_probs=13.0
Q ss_pred ceEEEEecCCccccc
Q 020675 84 DLAVLLEVDGVLVDA 98 (323)
Q Consensus 84 ~kaViFD~DGTLid~ 98 (323)
.++++||+||||++.
T Consensus 3 ~~~l~lD~DGTL~~~ 17 (244)
T TIGR00685 3 KRAFFFDYDGTLSEI 17 (244)
T ss_pred cEEEEEecCccccCC
Confidence 468999999999974
No 239
>PRK10976 putative hydrolase; Provisional
Probab=78.36 E-value=4.4 Score=36.71 Aligned_cols=38 Identities=11% Similarity=0.066 Sum_probs=29.8
Q ss_pred hHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 165 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 165 gv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
...+.|++|+++|++++++|++ ....+..+++.++++.
T Consensus 23 ~~~~ai~~l~~~G~~~~iaTGR---~~~~~~~~~~~l~~~~ 60 (266)
T PRK10976 23 YAKETLKLLTARGIHFVFATGR---HHVDVGQIRDNLEIKS 60 (266)
T ss_pred HHHHHHHHHHHCCCEEEEEcCC---ChHHHHHHHHhcCCCC
Confidence 3456788899999999999994 4566677888888864
No 240
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=78.22 E-value=3.5 Score=42.55 Aligned_cols=54 Identities=22% Similarity=0.305 Sum_probs=46.0
Q ss_pred CCCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC-ccccceeechhh
Q 020675 159 DAPLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE-RISKIKIVGNEE 216 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~-~~fd~~v~s~~~ 216 (323)
.++++|++.+||+.+.+. +.+.|.|- +.+.++..+.+.++.+ .||...|++.++
T Consensus 199 ~vKlRP~~~efL~~~skl-femhVyTm---g~R~YA~~i~~liDP~~~lF~dRIisrde 253 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKL-FEMHVYTM---GTRDYALEIAKLIDPEGKYFGDRIISRDE 253 (635)
T ss_pred EEEeCccHHHHHHHHHhh-ceeEEEec---cchHHHHHHHHHhCCCCccccceEEEecC
Confidence 367999999999999977 99999999 5678999999988876 678877887765
No 241
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=77.49 E-value=4.9 Score=36.39 Aligned_cols=38 Identities=13% Similarity=0.154 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 165 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 165 gv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
...+.|+.|+++|++++++|++ +...+...++.++++.
T Consensus 24 ~~~~ai~~~~~~G~~~~iaTGR---~~~~~~~~~~~l~~~~ 61 (272)
T PRK10530 24 ESLEALARAREAGYKVIIVTGR---HHVAIHPFYQALALDT 61 (272)
T ss_pred HHHHHHHHHHHCCCEEEEEcCC---ChHHHHHHHHhcCCCC
Confidence 3456778899999999999994 4566777888888764
No 242
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=76.97 E-value=5.6 Score=36.05 Aligned_cols=41 Identities=17% Similarity=0.314 Sum_probs=36.3
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
+.+...+.|+.++++|++++++|+ .....+..+++.+++..
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTG---R~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATG---RPLPDVLSILEELGLDG 61 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECC---CChHHHHHHHHHcCCCc
Confidence 677888999999999999999999 45688899999999986
No 243
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=76.69 E-value=5.4 Score=34.98 Aligned_cols=38 Identities=21% Similarity=0.420 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 165 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 165 gv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
...+.|+.|+++|++++++|+. +...+..+++.+++..
T Consensus 19 ~~~~al~~l~~~Gi~~~~aTGR---~~~~~~~~~~~l~~~~ 56 (225)
T TIGR01482 19 SALEAIRKAESVGIPVVLVTGN---SVQFARALAKLIGTPD 56 (225)
T ss_pred HHHHHHHHHHHCCCEEEEEcCC---chHHHHHHHHHhCCCC
Confidence 4456678889999999999994 4566777888888644
No 244
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=75.99 E-value=5.6 Score=42.53 Aligned_cols=37 Identities=16% Similarity=0.313 Sum_probs=26.6
Q ss_pred CCChhHHHHHHHHHHC-CCcEEEEcCCCCCChHHHHHHHHH
Q 020675 161 PLRPGVEDFVDDAYNE-GIPLIVLTAYGKSGDRIARSVVEK 200 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~-Gi~l~ivTn~~~~~~~~~~~~l~~ 200 (323)
.+.|++.++|+.|.+. +..|+|+|+. ....++.++..
T Consensus 532 ~p~~~l~~~L~~L~~d~~~~V~IvSGR---~~~~L~~~~~~ 569 (797)
T PLN03063 532 GLHPELKETLKALCSDPKTTVVVLSRS---GKDILDKNFGE 569 (797)
T ss_pred CCCHHHHHHHHHHHcCCCCEEEEEeCC---CHHHHHHHhCC
Confidence 3567888888888775 6789999984 45666666654
No 245
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=75.80 E-value=2.5 Score=44.68 Aligned_cols=135 Identities=15% Similarity=0.249 Sum_probs=72.9
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhh--hhcccccc----ccccc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERS--LYGQFVLG----KGISS 233 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~--~~~~~~~g----~~v~~ 233 (323)
-+|++.+.+.+..++++|+++..+|. .....+..+....|+-.--.. ++ ++.... .--..+.. -.|.+
T Consensus 589 dPPR~~vP~Av~~CrsAGIkvimVTg---dhpiTAkAiA~~vgIi~~~~e--t~-e~~a~r~~~~v~~vn~~~a~a~Vih 662 (1019)
T KOG0203|consen 589 DPPRAAVPDAVGKCRSAGIKVIMVTG---DHPITAKAIAKSVGIISEGSE--TV-EDIAKRLNIPVEQVNSRDAKAAVIH 662 (1019)
T ss_pred CCCcccCchhhhhhhhhCceEEEEec---CccchhhhhhhheeeecCCch--hh-hhhHHhcCCcccccCccccceEEEe
Confidence 36888999999999999999999998 445566666666664210000 00 100000 00000000 01122
Q ss_pred CcchhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEE-EEcCChhhHHHHHH
Q 020675 234 GVDEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCF-LIAGSQSGVAGAQR 312 (323)
Q Consensus 234 ~~~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v-~VGDs~~Di~aA~~ 312 (323)
|.+- +..+ +| ++ ++ ..+-+++|.+--..|..|.+ +-..++++| ++| +.||+.||-.|.++
T Consensus 663 G~eL-------~~~~-~~-ql-d~---il~nh~eIVFARTSPqQKLi--IVe~cQr~G----aiVaVTGDGVNDsPALKK 723 (1019)
T KOG0203|consen 663 GSEL-------PDMS-SE-QL-DE---LLQNHQEIVFARTSPQQKLI--IVEGCQRQG----AIVAVTGDGVNDSPALKK 723 (1019)
T ss_pred cccc-------cccC-HH-HH-HH---HHHhCCceEEEecCccceEE--eEhhhhhcC----cEEEEeCCCcCCChhhcc
Confidence 2110 0000 00 01 11 12455555443344444544 556677776 345 56999999999999
Q ss_pred cCCCEEE
Q 020675 313 IGMPCVV 319 (323)
Q Consensus 313 aG~~~v~ 319 (323)
|.+.+++
T Consensus 724 ADIGVAM 730 (1019)
T KOG0203|consen 724 ADIGVAM 730 (1019)
T ss_pred cccceee
Confidence 9998877
No 246
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=74.84 E-value=26 Score=35.76 Aligned_cols=32 Identities=13% Similarity=0.086 Sum_probs=25.3
Q ss_pred HHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 286 GAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 286 al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
-++..|++ ++|||+.. ...|+++|+..+++.+
T Consensus 150 ~lk~~G~~----~vvG~~~~-~~~A~~~g~~g~~~~s 181 (538)
T PRK15424 150 ELKANGIE----AVVGAGLI-TDLAEEAGMTGIFIYS 181 (538)
T ss_pred HHHHCCCC----EEEcCchH-HHHHHHhCCceEEecC
Confidence 34566765 78899766 7899999999998864
No 247
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=74.49 E-value=7.8 Score=42.08 Aligned_cols=40 Identities=10% Similarity=0.234 Sum_probs=29.9
Q ss_pred CCCChhHHHHHHHHHHC-CCcEEEEcCCCCCChHHHHHHHHHcC
Q 020675 160 APLRPGVEDFVDDAYNE-GIPLIVLTAYGKSGDRIARSVVEKLG 202 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~-Gi~l~ivTn~~~~~~~~~~~~l~~lg 202 (323)
..+.|++.++|+.|.+. +..|+|+|+. ....++..+...+
T Consensus 621 a~p~p~l~~~L~~L~~dp~n~VaIVSGR---~~~~Le~~fg~~~ 661 (934)
T PLN03064 621 LRLHPELKEPLRALCSDPKTTIVVLSGS---DRSVLDENFGEFD 661 (934)
T ss_pred cCCCHHHHHHHHHHHhCCCCeEEEEeCC---CHHHHHHHhCCCC
Confidence 34778899999999876 6789999994 4566776665443
No 248
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=73.28 E-value=2.2 Score=38.09 Aligned_cols=15 Identities=13% Similarity=0.361 Sum_probs=12.4
Q ss_pred EEEEecCCccccccc
Q 020675 86 AVLLEVDGVLVDAYR 100 (323)
Q Consensus 86 aViFD~DGTLid~~~ 100 (323)
+|++|+||||++...
T Consensus 1 li~~DlDgTLl~~~~ 15 (236)
T TIGR02471 1 LIITDLDNTLLGDDE 15 (236)
T ss_pred CeEEeccccccCCHH
Confidence 478999999998654
No 249
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=72.84 E-value=8.9 Score=36.01 Aligned_cols=33 Identities=24% Similarity=0.180 Sum_probs=21.1
Q ss_pred ceEEEEecCCccccccccchHHHHHHH---HHHcCCC
Q 020675 84 DLAVLLEVDGVLVDAYRFGNRQAFNVA---FQKLGLD 117 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~~~~~~a~~~~---~~~~g~~ 117 (323)
+|.|++|+||||+|.... ......++ +++.|+.
T Consensus 1 ~KLIftDLDGTLLd~~~~-~~~~a~~aL~~Lk~~GI~ 36 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEFN-SYGAARQALAALERRSIP 36 (302)
T ss_pred CcEEEEeCCCCCcCCCCc-CCHHHHHHHHHHHHCCCE
Confidence 478999999999996553 22333333 3445665
No 250
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=72.06 E-value=5 Score=42.37 Aligned_cols=36 Identities=3% Similarity=0.032 Sum_probs=26.6
Q ss_pred CChhHHHHHHHHHH-CCCcEEEEcCCCCCChHHHHHHHHH
Q 020675 162 LRPGVEDFVDDAYN-EGIPLIVLTAYGKSGDRIARSVVEK 200 (323)
Q Consensus 162 l~pgv~elL~~Lk~-~Gi~l~ivTn~~~~~~~~~~~~l~~ 200 (323)
+.+.+.+.|+.|.+ .|+.++|+|+. ....++..+..
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR---~~~~l~~~~~~ 551 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGR---DRDTLERWFGD 551 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCC---CHHHHHHHhCC
Confidence 56788999999998 49999999994 34555555443
No 251
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=71.93 E-value=3.6 Score=35.03 Aligned_cols=19 Identities=26% Similarity=0.174 Sum_probs=15.5
Q ss_pred CCceEEEEecCCccccccc
Q 020675 82 PRDLAVLLEVDGVLVDAYR 100 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~ 100 (323)
..+++|++|+||||++...
T Consensus 23 ~~v~~vv~D~Dgtl~~~~~ 41 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPDH 41 (170)
T ss_pred CCCCEEEEecCCccccCCC
Confidence 4578999999999996543
No 252
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=71.40 E-value=8.3 Score=35.23 Aligned_cols=36 Identities=11% Similarity=0.222 Sum_probs=29.6
Q ss_pred HHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 166 VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 166 v~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
..+.|++|+++|++++++|+. ....+..+++.+|++
T Consensus 29 ~~~ai~~l~~~Gi~~viaTGR---~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 29 AAPWLTRLREAQVPVILCSSK---TAAEMLPLQQTLGLQ 64 (271)
T ss_pred HHHHHHHHHHcCCeEEEEcCC---CHHHHHHHHHHhCCC
Confidence 445678899999999999994 567788889999985
No 253
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=69.87 E-value=25 Score=33.45 Aligned_cols=37 Identities=27% Similarity=0.240 Sum_probs=28.2
Q ss_pred HHHHHHHcCCCCCcEEEEcCC---hhhHHHHHHcCCCEEEEcCC
Q 020675 283 LRAGAEYAEKPVRNCFLIAGS---QSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs---~~Di~aA~~aG~~~v~v~~g 323 (323)
++.+.+...+ -|++|-+ ..|+..|-+.|...|++.++
T Consensus 241 i~~~~e~~~v----pVivdAGIg~~sda~~AmelGadgVL~nSa 280 (326)
T PRK11840 241 IRLIVEGATV----PVLVDAGVGTASDAAVAMELGCDGVLMNTA 280 (326)
T ss_pred HHHHHHcCCC----cEEEeCCCCCHHHHHHHHHcCCCEEEEcce
Confidence 5666666433 3677754 57999999999999999874
No 254
>PRK06769 hypothetical protein; Validated
Probab=69.16 E-value=4.6 Score=34.46 Aligned_cols=16 Identities=19% Similarity=0.345 Sum_probs=13.5
Q ss_pred CceEEEEecCCccccc
Q 020675 83 RDLAVLLEVDGVLVDA 98 (323)
Q Consensus 83 ~~kaViFD~DGTLid~ 98 (323)
.+|+++||.||||.-.
T Consensus 3 ~~~~~~~d~d~~~~~~ 18 (173)
T PRK06769 3 NIQAIFIDRDGTIGGD 18 (173)
T ss_pred CCcEEEEeCCCcccCC
Confidence 5789999999999543
No 255
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=68.86 E-value=23 Score=33.60 Aligned_cols=28 Identities=21% Similarity=0.383 Sum_probs=25.1
Q ss_pred CCCCChhHHHHHHHHHHCC-CcEEEEcCC
Q 020675 159 DAPLRPGVEDFVDDAYNEG-IPLIVLTAY 186 (323)
Q Consensus 159 ~~~l~pgv~elL~~Lk~~G-i~l~ivTn~ 186 (323)
.-+++|||-.+.+.|.+.| .++..+||+
T Consensus 194 tr~~ipGV~~~yr~l~~~~~apvfYvSnS 222 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLGDAPVFYVSNS 222 (373)
T ss_pred ccCCCCCHHHHHHHHHhcCCCCeEEecCC
Confidence 4568999999999999998 899999994
No 256
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=68.83 E-value=59 Score=26.45 Aligned_cols=40 Identities=13% Similarity=0.206 Sum_probs=25.2
Q ss_pred HHHHHHHcCCCCCcEEEE----cCChh---hHHHHHHcCCCEEEEcC
Q 020675 283 LRAGAEYAEKPVRNCFLI----AGSQS---GVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~V----GDs~~---Di~aA~~aG~~~v~v~~ 322 (323)
-+.+++.+.+.|.+++++ |.+++ =++.|++.||.+|.+++
T Consensus 92 ~~~~~~~~~~~~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIalTg 138 (138)
T PF13580_consen 92 ARQLLALYDIRPGDVLIVISNSGNSPNVIEAAEEAKERGMKVIALTG 138 (138)
T ss_dssp HHHHHHHTT--TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEEEE
T ss_pred HHHHHHHcCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 355667778899999876 44444 35668888999998863
No 257
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=68.75 E-value=9.3 Score=39.86 Aligned_cols=25 Identities=28% Similarity=0.360 Sum_probs=23.2
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcC
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTA 185 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn 185 (323)
++..+++-.|+.|+++|++++.+|+
T Consensus 658 kLQ~dVk~tLElLRNAgikiWMLTG 682 (1051)
T KOG0210|consen 658 KLQDDVKPTLELLRNAGIKIWMLTG 682 (1051)
T ss_pred HHhhhhHhHHHHHhhcCcEEEEEcC
Confidence 4778899999999999999999998
No 258
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=68.71 E-value=38 Score=30.89 Aligned_cols=41 Identities=20% Similarity=0.223 Sum_probs=29.6
Q ss_pred CCCChhHHHHHHHHHHC---CCcEE-EEcCCCCCChHHHHHHHHHcCCCc
Q 020675 160 APLRPGVEDFVDDAYNE---GIPLI-VLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~---Gi~l~-ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
-.+.|+..+.++..+.. |+.+. ++++ +......+..+|-+-
T Consensus 103 ~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~d-----d~~~ar~l~~~G~~~ 147 (248)
T cd04728 103 KTLLPDPIETLKAAEILVKEGFTVLPYCTD-----DPVLAKRLEDAGCAA 147 (248)
T ss_pred cccccCHHHHHHHHHHHHHCCCEEEEEeCC-----CHHHHHHHHHcCCCE
Confidence 45889999999888877 99999 6666 344555566667654
No 259
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=67.84 E-value=11 Score=40.61 Aligned_cols=15 Identities=40% Similarity=0.643 Sum_probs=8.9
Q ss_pred ceEEEEecCCccccc
Q 020675 84 DLAVLLEVDGVLVDA 98 (323)
Q Consensus 84 ~kaViFD~DGTLid~ 98 (323)
.++|++|+||||++.
T Consensus 596 ~rlI~LDyDGTLlp~ 610 (854)
T PLN02205 596 TRAILLDYDGTLMPQ 610 (854)
T ss_pred CeEEEEecCCcccCC
Confidence 456666666666643
No 260
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=66.58 E-value=17 Score=34.00 Aligned_cols=103 Identities=12% Similarity=0.068 Sum_probs=48.5
Q ss_pred CceEEEEecCCcccccccc-chHHHHHHHHHHcCCCCC------CCCHHHHHH-HHcccCC--cHHHHHHHHHhHHHHHH
Q 020675 83 RDLAVLLEVDGVLVDAYRF-GNRQAFNVAFQKLGLDCA------NWTAPIYTD-LLRKSAG--DEDRMLVLFFNRKNALD 152 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~-~~~~a~~~~~~~~g~~~~------~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~ 152 (323)
.+..++||.||||..-... .....+...+..+|.... ..+.+.|.+ +...... .++.+....+....++.
T Consensus 21 ~~DtfifDcDGVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~v~e~~i~ssa~~~a~ylk 100 (306)
T KOG2882|consen 21 SFDTFIFDCDGVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNSVKEENIFSSAYAIADYLK 100 (306)
T ss_pred hcCEEEEcCCcceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccccCcccccChHHHHHHHHH
Confidence 4568999999999964432 112334455566664321 122333332 2111111 12222211111122222
Q ss_pred HHHhcCCCCCChhHHHHHHHHHHCCCcEEEEcC
Q 020675 153 EFLASKDAPLRPGVEDFVDDAYNEGIPLIVLTA 185 (323)
Q Consensus 153 ~~i~~~~~~l~pgv~elL~~Lk~~Gi~l~ivTn 185 (323)
.......-....|...+-+.|++.|+.......
T Consensus 101 ~~~~~~k~Vyvig~~gi~~eL~~aG~~~~g~~~ 133 (306)
T KOG2882|consen 101 KRKPFGKKVYVIGEEGIREELDEAGFEYFGGGP 133 (306)
T ss_pred HhCcCCCeEEEecchhhhHHHHHcCceeecCCC
Confidence 222111222456777888888888876655443
No 261
>PRK00208 thiG thiazole synthase; Reviewed
Probab=66.26 E-value=46 Score=30.42 Aligned_cols=41 Identities=20% Similarity=0.213 Sum_probs=29.4
Q ss_pred CCCChhHHHHHHHHHHC---CCcEE-EEcCCCCCChHHHHHHHHHcCCCc
Q 020675 160 APLRPGVEDFVDDAYNE---GIPLI-VLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~---Gi~l~-ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
-.+.|+..+.++..+.. |+.+. ++++ +......+..+|-+-
T Consensus 103 ~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~-----d~~~ak~l~~~G~~~ 147 (250)
T PRK00208 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTD-----DPVLAKRLEEAGCAA 147 (250)
T ss_pred CCCCcCHHHHHHHHHHHHHCCCEEEEEeCC-----CHHHHHHHHHcCCCE
Confidence 44788888888888777 99999 7776 344555566667654
No 262
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=66.23 E-value=79 Score=28.80 Aligned_cols=36 Identities=14% Similarity=0.262 Sum_probs=27.9
Q ss_pred HHHHHHHcCCCCCcEEEEcCChh--hHHHHHHcCCCEEEEc
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQS--GVAGAQRIGMPCVVMR 321 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~--Di~aA~~aG~~~v~v~ 321 (323)
-+..++..|+ .||.|||.+. +..+.++.|+..|.+.
T Consensus 79 ARE~l~~~~i---P~IvI~D~p~~K~~d~l~~~g~GYIivk 116 (277)
T PRK00994 79 AREILKAAGI---PCIVIGDAPGKKVKDAMEEQGLGYIIVK 116 (277)
T ss_pred HHHHHHhcCC---CEEEEcCCCccchHHHHHhcCCcEEEEe
Confidence 3566777777 4899999863 6688889999888774
No 263
>PLN02580 trehalose-phosphatase
Probab=64.79 E-value=9.8 Score=37.06 Aligned_cols=16 Identities=31% Similarity=0.559 Sum_probs=12.6
Q ss_pred ceEEEEecCCcccccc
Q 020675 84 DLAVLLEVDGVLVDAY 99 (323)
Q Consensus 84 ~kaViFD~DGTLid~~ 99 (323)
..+++||+||||.+..
T Consensus 119 ~~~LfLDyDGTLaPIv 134 (384)
T PLN02580 119 KIALFLDYDGTLSPIV 134 (384)
T ss_pred CeEEEEecCCccCCCC
Confidence 4588899999998643
No 264
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=64.05 E-value=8 Score=34.78 Aligned_cols=35 Identities=17% Similarity=0.430 Sum_probs=20.4
Q ss_pred CceEEEEecCCcccc-ccccchHHHHHHHHHHcCCC
Q 020675 83 RDLAVLLEVDGVLVD-AYRFGNRQAFNVAFQKLGLD 117 (323)
Q Consensus 83 ~~kaViFD~DGTLid-~~~~~~~~a~~~~~~~~g~~ 117 (323)
.++.|+.|+||||++ +....-..-+..-+.+.|++
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~~pA~pv~~el~d~G~~ 41 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEWQPAAPVLLELKDAGVP 41 (274)
T ss_pred cceEEEEcccCcccCCCCCCCccchHHHHHHHcCCe
Confidence 356899999999998 32211112233344455654
No 265
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=63.62 E-value=7 Score=34.53 Aligned_cols=28 Identities=25% Similarity=0.247 Sum_probs=19.3
Q ss_pred eEEEEecCCccccccccchHHHHHHHHHH
Q 020675 85 LAVLLEVDGVLVDAYRFGNRQAFNVAFQK 113 (323)
Q Consensus 85 kaViFD~DGTLid~~~~~~~~a~~~~~~~ 113 (323)
-.++||+||||+..... ...-+.+.+++
T Consensus 12 ~l~lfdvdgtLt~~r~~-~~~e~~~~l~~ 39 (252)
T KOG3189|consen 12 TLCLFDVDGTLTPPRQK-VTPEMLEFLQK 39 (252)
T ss_pred eEEEEecCCcccccccc-CCHHHHHHHHH
Confidence 47899999999987653 34444555554
No 266
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=61.78 E-value=5.2 Score=33.13 Aligned_cols=16 Identities=25% Similarity=0.459 Sum_probs=13.8
Q ss_pred ceEEEEecCCcccccc
Q 020675 84 DLAVLLEVDGVLVDAY 99 (323)
Q Consensus 84 ~kaViFD~DGTLid~~ 99 (323)
.+.+++|+||||+++.
T Consensus 2 k~~lvldld~tl~~~~ 17 (148)
T smart00577 2 KKTLVLDLDETLVHST 17 (148)
T ss_pred CcEEEEeCCCCeECCC
Confidence 3578999999999985
No 267
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=60.32 E-value=19 Score=31.09 Aligned_cols=36 Identities=11% Similarity=0.286 Sum_probs=28.1
Q ss_pred ChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHc
Q 020675 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 201 (323)
Q Consensus 163 ~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~l 201 (323)
.+.+.+.|++|+++|++++++|++ ....+..+++.+
T Consensus 19 ~~~~~~~l~~l~~~g~~~~i~TGR---~~~~~~~~~~~~ 54 (204)
T TIGR01484 19 SPETIEALERLREAGVKVVLVTGR---SLAEIKELLKQL 54 (204)
T ss_pred CHHHHHHHHHHHHCCCEEEEECCC---CHHHHHHHHHhC
Confidence 357778899999999999999994 456667777653
No 268
>TIGR03470 HpnH hopanoid biosynthesis associated radical SAM protein HpnH. The sequences represented by this model are members of the radical SAM superfamily of enzymes (pfam04055). These enzymes utilize an iron-sulfur redox cluster and S-adenosylmethionine to carry out diverse radical mediated reactions. The members of this clade are frequently found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. The linkage between SHC and this radical SAM enzyme is strong; one is nearly always observed in the same genome where the other is found. A hopanoid biosynthesis locus was described in Zymomonas mobilis consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and this radical SAM enzyme (ZMO0874) which we name here HpnH. Granted, in Z. mobilis, HpnH is in a convergent orientation with respect to HpnA-G, but one gene beyond HpnH
Probab=57.76 E-value=53 Score=30.93 Aligned_cols=25 Identities=16% Similarity=0.219 Sum_probs=22.6
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCC
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAY 186 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~ 186 (323)
++|.+.++++.++++|..+.+.||+
T Consensus 85 L~pdl~eiv~~~~~~g~~v~l~TNG 109 (318)
T TIGR03470 85 LHPEIDEIVRGLVARKKFVYLCTNA 109 (318)
T ss_pred ccccHHHHHHHHHHcCCeEEEecCc
Confidence 6778899999999999999999995
No 269
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=55.33 E-value=9.2 Score=34.17 Aligned_cols=34 Identities=9% Similarity=-0.037 Sum_probs=22.9
Q ss_pred HHHHHHHcCCC---CCcEEEEcCChhhHHHHHHcCCC
Q 020675 283 LRAGAEYAEKP---VRNCFLIAGSQSGVAGAQRIGMP 316 (323)
Q Consensus 283 ~~~al~~lgv~---p~~~v~VGDs~~Di~aA~~aG~~ 316 (323)
.+.+++.++.. +.-++|+||...|-.+.+.+.-.
T Consensus 170 v~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~ 206 (235)
T PF02358_consen 170 VRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALREL 206 (235)
T ss_dssp HHHHHTTS---------EEEEESSHHHHHHHHTTTTS
T ss_pred HHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhc
Confidence 67778888765 77899999999998888776543
No 270
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=53.05 E-value=7.9 Score=32.71 Aligned_cols=16 Identities=25% Similarity=0.382 Sum_probs=13.8
Q ss_pred eEEEEecCCccccccc
Q 020675 85 LAVLLEVDGVLVDAYR 100 (323)
Q Consensus 85 kaViFD~DGTLid~~~ 100 (323)
+.+++|+|+||+.+..
T Consensus 2 ~~lvlDLDeTLi~~~~ 17 (162)
T TIGR02251 2 KTLVLDLDETLVHSTF 17 (162)
T ss_pred cEEEEcCCCCcCCCCC
Confidence 4789999999998865
No 271
>PLN02382 probable sucrose-phosphatase
Probab=51.97 E-value=17 Score=35.78 Aligned_cols=15 Identities=27% Similarity=0.527 Sum_probs=12.3
Q ss_pred ceEEEEecCCccccc
Q 020675 84 DLAVLLEVDGVLVDA 98 (323)
Q Consensus 84 ~kaViFD~DGTLid~ 98 (323)
.-.|+-||||||++.
T Consensus 9 ~~lI~sDLDGTLL~~ 23 (413)
T PLN02382 9 RLMIVSDLDHTMVDH 23 (413)
T ss_pred CEEEEEcCCCcCcCC
Confidence 347778999999986
No 272
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=51.74 E-value=1.8e+02 Score=26.10 Aligned_cols=41 Identities=5% Similarity=-0.006 Sum_probs=32.8
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCC
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 203 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl 203 (323)
..+...++|+.+|+.|.+.+++=|-. .+-.....+++.+++
T Consensus 94 ~~~~~~r~i~~Ik~~G~kaGv~lnP~-Tp~~~i~~~l~~vD~ 134 (220)
T COG0036 94 ATEHIHRTIQLIKELGVKAGLVLNPA-TPLEALEPVLDDVDL 134 (220)
T ss_pred cCcCHHHHHHHHHHcCCeEEEEECCC-CCHHHHHHHHhhCCE
Confidence 56788999999999999999999865 356677777776554
No 273
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=50.97 E-value=33 Score=28.58 Aligned_cols=35 Identities=14% Similarity=0.198 Sum_probs=25.2
Q ss_pred ChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHH
Q 020675 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVE 199 (323)
Q Consensus 163 ~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~ 199 (323)
.+.+.++++.+++.|+++.+.||.. ..+....+++
T Consensus 74 ~~~l~~ll~~lk~~Gl~i~l~Tg~~--~~~~~~~il~ 108 (147)
T TIGR02826 74 REALLSLLKIFKEKGLKTCLYTGLE--PKDIPLELVQ 108 (147)
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCC--CHHHHHHHHH
Confidence 3567889999999999999999952 3334444443
No 274
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=50.55 E-value=11 Score=35.80 Aligned_cols=31 Identities=23% Similarity=0.583 Sum_probs=25.7
Q ss_pred CCCcEEEEcCCh-hhHHHHH---------------HcCCCEEEEcCC
Q 020675 293 PVRNCFLIAGSQ-SGVAGAQ---------------RIGMPCVVMRSR 323 (323)
Q Consensus 293 ~p~~~v~VGDs~-~Di~aA~---------------~aG~~~v~v~~g 323 (323)
.++...+|||.+ +|+.+|. .-|+..|+|.+|
T Consensus 296 ~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TG 342 (389)
T KOG1618|consen 296 PIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTG 342 (389)
T ss_pred CcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeee
Confidence 467788999996 6999996 678888998876
No 275
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=50.12 E-value=11 Score=31.83 Aligned_cols=19 Identities=21% Similarity=0.468 Sum_probs=15.5
Q ss_pred CceEEEEecCCcccccccc
Q 020675 83 RDLAVLLEVDGVLVDAYRF 101 (323)
Q Consensus 83 ~~kaViFD~DGTLid~~~~ 101 (323)
..+.+++|+|.||+.+...
T Consensus 5 ~kl~LVLDLDeTLihs~~~ 23 (156)
T TIGR02250 5 KKLHLVLDLDQTLIHTTKD 23 (156)
T ss_pred CceEEEEeCCCCccccccc
Confidence 3458999999999998764
No 276
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=47.08 E-value=1.7e+02 Score=26.65 Aligned_cols=96 Identities=20% Similarity=0.283 Sum_probs=57.4
Q ss_pred CCCChhHHHHHH---HHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccce-eechhhhhhhhhcccccccccccCc
Q 020675 160 APLRPGVEDFVD---DAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK-IVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 160 ~~l~pgv~elL~---~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~-v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
..++|+..++++ .|-+.|+.|.-.++ .+..+-+.|+..|-.-....- -+++.. |
T Consensus 103 ~~L~PD~~etl~Aae~Lv~eGF~VlPY~~----~D~v~akrL~d~GcaavMPlgsPIGSg~-----------------G- 160 (247)
T PF05690_consen 103 KTLLPDPIETLKAAEILVKEGFVVLPYCT----DDPVLAKRLEDAGCAAVMPLGSPIGSGR-----------------G- 160 (247)
T ss_dssp TT--B-HHHHHHHHHHHHHTT-EEEEEE-----S-HHHHHHHHHTT-SEBEEBSSSTTT---------------------
T ss_pred CCcCCChhHHHHHHHHHHHCCCEEeecCC----CCHHHHHHHHHCCCCEEEecccccccCc-----------------C-
Confidence 446777777665 46678999998888 356677778888876544310 111111 1
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcC---ChhhHHHHHH
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAG---SQSGVAGAQR 312 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGD---s~~Di~aA~~ 312 (323)
=-+|.. ++.++++.+++ |.|+- +++|..-|-+
T Consensus 161 ---------------------------i~n~~~--------------l~~i~~~~~vP----vIvDAGiG~pSdaa~AME 195 (247)
T PF05690_consen 161 ---------------------------IQNPYN--------------LRIIIERADVP----VIVDAGIGTPSDAAQAME 195 (247)
T ss_dssp ---------------------------SSTHHH--------------HHHHHHHGSSS----BEEES---SHHHHHHHHH
T ss_pred ---------------------------CCCHHH--------------HHHHHHhcCCc----EEEeCCCCCHHHHHHHHH
Confidence 112222 77888888775 55654 3689999999
Q ss_pred cCCCEEEEcC
Q 020675 313 IGMPCVVMRS 322 (323)
Q Consensus 313 aG~~~v~v~~ 322 (323)
.|+..|+|.+
T Consensus 196 lG~daVLvNT 205 (247)
T PF05690_consen 196 LGADAVLVNT 205 (247)
T ss_dssp TT-SEEEESH
T ss_pred cCCceeehhh
Confidence 9999999975
No 277
>PLN02887 hydrolase family protein
Probab=46.71 E-value=36 Score=35.13 Aligned_cols=41 Identities=7% Similarity=0.193 Sum_probs=34.4
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
.+-+...+.|+.|+++|+.++++|+. ....+..+++.+++.
T Consensus 325 ~Is~~t~eAI~kl~ekGi~~vIATGR---~~~~i~~~l~~L~l~ 365 (580)
T PLN02887 325 QISETNAKALKEALSRGVKVVIATGK---ARPAVIDILKMVDLA 365 (580)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEcCC---CHHHHHHHHHHhCcc
Confidence 36678899999999999999999994 456677788888875
No 278
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=46.54 E-value=39 Score=35.50 Aligned_cols=37 Identities=16% Similarity=0.117 Sum_probs=29.7
Q ss_pred HHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 166 VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 166 v~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
..+.|+.|+++|++++++|+. ....+..+.+.+++..
T Consensus 438 t~eAL~~L~ekGI~~VIATGR---s~~~i~~l~~~Lgl~~ 474 (694)
T PRK14502 438 ALDALRLLKDKELPLVFCSAK---TMGEQDLYRNELGIKD 474 (694)
T ss_pred HHHHHHHHHHcCCeEEEEeCC---CHHHHHHHHHHcCCCC
Confidence 356788899999999999994 4567778888888764
No 279
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=46.02 E-value=31 Score=30.93 Aligned_cols=38 Identities=11% Similarity=0.091 Sum_probs=28.1
Q ss_pred hHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 165 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 165 gv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
...++++.++++|+.++++|+ .....++.+++.+++..
T Consensus 25 ~~~~~i~~~~~~gi~fv~aTG---R~~~~~~~~~~~~~~~~ 62 (249)
T TIGR01485 25 RLNALLEDHRGEDSLLVYSTG---RSPHSYKELQKQKPLLT 62 (249)
T ss_pred HHHHHHHHhhccCceEEEEcC---CCHHHHHHHHhcCCCCC
Confidence 444567778889999999999 44567777777777653
No 280
>COG0019 LysA Diaminopimelate decarboxylase [Amino acid transport and metabolism]
Probab=45.66 E-value=1.2e+02 Score=29.70 Aligned_cols=38 Identities=13% Similarity=0.131 Sum_probs=29.8
Q ss_pred HHHHHHcCCCCCcEEEEcCC--hhhHHHHHHcCCCEEEEcC
Q 020675 284 RAGAEYAEKPVRNCFLIAGS--QSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 284 ~~al~~lgv~p~~~v~VGDs--~~Di~aA~~aG~~~v~v~~ 322 (323)
+.+++. |++|++++|-|.. ..+|..|.+.|+.+|.|.+
T Consensus 87 ~~al~a-G~~~~~I~f~g~~ks~~ei~~a~e~gi~~i~vdS 126 (394)
T COG0019 87 ELALAA-GFPPERIVFSGPAKSEEEIAFALELGIKLINVDS 126 (394)
T ss_pred HHHHHc-CCChhhEEECCCCCCHHHHHHHHHcCCcEEEeCC
Confidence 334433 9999999999885 5689999999999877654
No 281
>PF04123 DUF373: Domain of unknown function (DUF373); InterPro: IPR007254 This archaeal family of unknown function is predicted to be an integral membrane protein with six transmembrane regions.
Probab=44.98 E-value=91 Score=29.95 Aligned_cols=24 Identities=4% Similarity=-0.015 Sum_probs=17.7
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHH
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVA 308 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~ 308 (323)
++.+++++ +|+.+++|.|+..|=.
T Consensus 90 ld~vl~~~--~~~~~i~VsDGaeDE~ 113 (344)
T PF04123_consen 90 LDEVLSKF--DPDSAIVVSDGAEDER 113 (344)
T ss_pred HHHHHHhC--CCCEEEEEecChhhhh
Confidence 45566665 4679999999998843
No 282
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=44.77 E-value=1.5e+02 Score=27.26 Aligned_cols=97 Identities=18% Similarity=0.266 Sum_probs=62.7
Q ss_pred CCCChhHHHHHHH---HHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccce-eechhhhhhhhhcccccccccccCc
Q 020675 160 APLRPGVEDFVDD---AYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIK-IVGNEEVERSLYGQFVLGKGISSGV 235 (323)
Q Consensus 160 ~~l~pgv~elL~~---Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~-v~s~~~~~~~~~~~~~~g~~v~~~~ 235 (323)
-.+.|+..|+++. |-+.|+.|.-.++ .+..+-+.|+..|-.-....- -+++. . |
T Consensus 117 ~~LlPD~~etl~Aae~Lv~eGF~VlPY~~----~D~v~a~rLed~Gc~aVMPlgsPIGSg-------------~----G- 174 (267)
T CHL00162 117 KYLLPDPIGTLKAAEFLVKKGFTVLPYIN----ADPMLAKHLEDIGCATVMPLGSPIGSG-------------Q----G- 174 (267)
T ss_pred cccCCChHHHHHHHHHHHHCCCEEeecCC----CCHHHHHHHHHcCCeEEeeccCcccCC-------------C----C-
Confidence 3477777776654 6678999999888 356677777777865433310 11111 1 1
Q ss_pred chhHHHHHHHHhhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC---hhhHHHHHH
Q 020675 236 DEQLATEARKAVSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS---QSGVAGAQR 312 (323)
Q Consensus 236 ~~~~~~~~~k~~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs---~~Di~aA~~ 312 (323)
=.+|.. ++.+++...++ |++|-+ .+|+..|-+
T Consensus 175 ---------------------------l~n~~~--------------l~~i~e~~~vp----VivdAGIgt~sDa~~AmE 209 (267)
T CHL00162 175 ---------------------------LQNLLN--------------LQIIIENAKIP----VIIDAGIGTPSEASQAME 209 (267)
T ss_pred ---------------------------CCCHHH--------------HHHHHHcCCCc----EEEeCCcCCHHHHHHHHH
Confidence 122222 66666765543 666654 689999999
Q ss_pred cCCCEEEEcCC
Q 020675 313 IGMPCVVMRSR 323 (323)
Q Consensus 313 aG~~~v~v~~g 323 (323)
.|...|++.++
T Consensus 210 lGaDgVL~nSa 220 (267)
T CHL00162 210 LGASGVLLNTA 220 (267)
T ss_pred cCCCEEeecce
Confidence 99999999874
No 283
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=44.75 E-value=2.3e+02 Score=25.25 Aligned_cols=39 Identities=10% Similarity=0.031 Sum_probs=28.9
Q ss_pred ChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcC
Q 020675 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLG 202 (323)
Q Consensus 163 ~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lg 202 (323)
.+...++|+.+|+.|.+.+++-|.. .+...+..+++..+
T Consensus 92 ~~~~~~~l~~ik~~g~k~GlalnP~-Tp~~~i~~~l~~~D 130 (220)
T PRK08883 92 SEHVDRTLQLIKEHGCQAGVVLNPA-TPLHHLEYIMDKVD 130 (220)
T ss_pred cccHHHHHHHHHHcCCcEEEEeCCC-CCHHHHHHHHHhCC
Confidence 3467899999999999999999855 34555666665443
No 284
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=43.63 E-value=15 Score=31.90 Aligned_cols=17 Identities=24% Similarity=0.284 Sum_probs=14.6
Q ss_pred ceEEEEecCCccccccc
Q 020675 84 DLAVLLEVDGVLVDAYR 100 (323)
Q Consensus 84 ~kaViFD~DGTLid~~~ 100 (323)
.++|++|-||||.....
T Consensus 5 ~k~lflDRDGtin~d~~ 21 (181)
T COG0241 5 QKALFLDRDGTINIDKG 21 (181)
T ss_pred CcEEEEcCCCceecCCC
Confidence 67999999999987655
No 285
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=43.50 E-value=46 Score=31.57 Aligned_cols=27 Identities=15% Similarity=0.330 Sum_probs=24.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCC
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAY 186 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~ 186 (323)
..++|.+.++++.++++|+.+.|.||+
T Consensus 141 PlL~p~l~eli~~~k~~Gi~~~L~TNG 167 (322)
T PRK13762 141 PTLYPYLPELIEEFHKRGFTTFLVTNG 167 (322)
T ss_pred ccchhhHHHHHHHHHHcCCCEEEECCC
Confidence 346889999999999999999999995
No 286
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=43.45 E-value=81 Score=34.47 Aligned_cols=46 Identities=17% Similarity=0.159 Sum_probs=35.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd 208 (323)
-++.+...++|++|.+++++.+++|+ .+-..+-.+-+..|+-+-+.
T Consensus 704 NkLK~~T~~VI~eL~~AnIRtVMcTG---DNllTaisVakeCgmi~p~~ 749 (1140)
T KOG0208|consen 704 NKLKEETKRVIDELNRANIRTVMCTG---DNLLTAISVAKECGMIEPQV 749 (1140)
T ss_pred cccccccHHHHHHHHhhcceEEEEcC---CchheeeehhhcccccCCCC
Confidence 35889999999999999999999998 44455555666777755443
No 287
>PRK08005 epimerase; Validated
Probab=43.01 E-value=1e+02 Score=27.32 Aligned_cols=36 Identities=8% Similarity=-0.080 Sum_probs=26.6
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK 200 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~ 200 (323)
+...++|+.+|+.|.+.+|+=|.. .+...++.++..
T Consensus 93 ~~~~~~l~~Ik~~G~k~GlAlnP~-Tp~~~i~~~l~~ 128 (210)
T PRK08005 93 QNPSEILADIRAIGAKAGLALNPA-TPLLPYRYLALQ 128 (210)
T ss_pred cCHHHHHHHHHHcCCcEEEEECCC-CCHHHHHHHHHh
Confidence 457789999999999999998854 244555555553
No 288
>PF10307 DUF2410: Hypothetical protein (DUF2410); InterPro: IPR018812 This entry represents a family of proteins conserved in fungi whose function is not known. There are two characteristic sequence motifs, GGWW and TGR.
Probab=42.19 E-value=2.4e+02 Score=24.82 Aligned_cols=29 Identities=10% Similarity=0.016 Sum_probs=23.7
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHH
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQR 312 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~ 312 (323)
+...++.+. ..+++-+.+|...-+++.+.
T Consensus 123 l~~ll~~Y~-~~~eI~IYeDR~~hvk~Fr~ 151 (197)
T PF10307_consen 123 LEDLLHTYK-NAEEIRIYEDRPKHVKGFRD 151 (197)
T ss_pred HHHHHHhcC-CCCEEEEEcCCHHHHHHHHH
Confidence 667788887 88999999999888877654
No 289
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=42.15 E-value=1.4e+02 Score=27.52 Aligned_cols=35 Identities=17% Similarity=0.292 Sum_probs=24.8
Q ss_pred HHHHHcCCCCCcEEEEcCCh------hhHHHHHHcCCCEEEEcC
Q 020675 285 AGAEYAEKPVRNCFLIAGSQ------SGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 285 ~al~~lgv~p~~~v~VGDs~------~Di~aA~~aG~~~v~v~~ 322 (323)
..+++++++ +|.-=||. .=+.+|++.|+.+|+|..
T Consensus 190 all~q~~id---~vItK~SG~~Gg~~~Ki~aA~eLgi~VI~I~R 230 (257)
T COG2099 190 ALLEQYRID---VVVTKNSGGAGGTYEKIEAARELGIPVIMIER 230 (257)
T ss_pred HHHHHhCCC---EEEEccCCcccCcHHHHHHHHHcCCcEEEEec
Confidence 346777765 45544543 359999999999999863
No 290
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=39.63 E-value=33 Score=37.81 Aligned_cols=39 Identities=21% Similarity=0.155 Sum_probs=29.6
Q ss_pred HHHHHHHHHcCCCCCcE-EEEcCChh-hHHHHHHcCC-CEEEE
Q 020675 281 AALRAGAEYAEKPVRNC-FLIAGSQS-GVAGAQRIGM-PCVVM 320 (323)
Q Consensus 281 ~~~~~al~~lgv~p~~~-v~VGDs~~-Di~aA~~aG~-~~v~v 320 (323)
.|++..+.++|++.+++ ||+|||.+ |++... .|. ++|.+
T Consensus 959 qAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll-~G~~~tvi~ 1000 (1050)
T TIGR02468 959 QALRYLFVRWGIELANMAVFVGESGDTDYEGLL-GGLHKTVIL 1000 (1050)
T ss_pred HHHHHHHHHcCCChHHeEEEeccCCCCCHHHHh-CCceeEEEE
Confidence 35788899999999999 56999999 987663 344 34443
No 291
>COG3273 Uncharacterized conserved protein [Function unknown]
Probab=39.57 E-value=48 Score=28.98 Aligned_cols=62 Identities=15% Similarity=0.150 Sum_probs=46.0
Q ss_pred hhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcC------CCCCcEEEEcCChhhHHHHHHcCCCEEEE
Q 020675 247 VSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAE------KPVRNCFLIAGSQSGVAGAQRIGMPCVVM 320 (323)
Q Consensus 247 ~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lg------v~p~~~v~VGDs~~Di~aA~~aG~~~v~v 320 (323)
.|..-.+|++.|+.-..|||.+ +.++...+ .-.+...+.|-+..|+.-+.+-||++|.+
T Consensus 88 iSdAA~DIA~lVl~~v~ph~~v---------------k~al~e~eE~I~rv~v~~~S~l~gktLg~l~L~t~tGvrVIAI 152 (204)
T COG3273 88 ISDAAGDIAKLVLRGVEPHPIV---------------KKALHESEEIIVRVRVEKGSELAGKTLGELDLATNTGVRVIAI 152 (204)
T ss_pred HHHHHHHHHHHHHcCCCCCHHH---------------HHHHHhhhhheEEEEecCCCeecccchhhhccccccceEEEEE
Confidence 3444568889999888998876 33333322 12456778899999999999999999999
Q ss_pred cCC
Q 020675 321 RSR 323 (323)
Q Consensus 321 ~~g 323 (323)
+.|
T Consensus 153 RRG 155 (204)
T COG3273 153 RRG 155 (204)
T ss_pred ecC
Confidence 865
No 292
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=39.16 E-value=1.7e+02 Score=22.28 Aligned_cols=26 Identities=8% Similarity=0.019 Sum_probs=20.0
Q ss_pred CcEEEEcCChhhHHHHHHcCCCEEEE
Q 020675 295 RNCFLIAGSQSGVAGAQRIGMPCVVM 320 (323)
Q Consensus 295 ~~~v~VGDs~~Di~aA~~aG~~~v~v 320 (323)
..++..-++....+..+.+|+..|..
T Consensus 90 ~~ii~~~~~~~~~~~l~~~g~d~vi~ 115 (116)
T PF02254_consen 90 IRIIARVNDPENAELLRQAGADHVIS 115 (116)
T ss_dssp SEEEEEESSHHHHHHHHHTT-SEEEE
T ss_pred CeEEEEECCHHHHHHHHHCCcCEEEC
Confidence 46777778888888889999988764
No 293
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD.
Probab=38.73 E-value=89 Score=26.56 Aligned_cols=25 Identities=24% Similarity=0.356 Sum_probs=22.2
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCC
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAY 186 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~ 186 (323)
+.|.+.++++.+++.|+.+.+.||.
T Consensus 75 l~~~l~~li~~~~~~g~~v~i~TNg 99 (191)
T TIGR02495 75 LQAGLPDFLRKVRELGFEVKLDTNG 99 (191)
T ss_pred CcHhHHHHHHHHHHCCCeEEEEeCC
Confidence 5677889999999999999999995
No 294
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=38.68 E-value=68 Score=28.46 Aligned_cols=38 Identities=11% Similarity=0.047 Sum_probs=27.4
Q ss_pred CChh-HHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH
Q 020675 162 LRPG-VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK 200 (323)
Q Consensus 162 l~pg-v~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~ 200 (323)
+.++ +.++++.++++|+.+++.||... +......++..
T Consensus 51 lq~~fl~~l~~~~k~~gi~~~leTnG~~-~~~~~~~l~~~ 89 (213)
T PRK10076 51 MQAEFATRFLQRLRLWGVSCAIETAGDA-PASKLLPLAKL 89 (213)
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCCCC-CHHHHHHHHHh
Confidence 5566 68999999999999999999532 33444444443
No 295
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=38.38 E-value=58 Score=31.46 Aligned_cols=49 Identities=16% Similarity=0.266 Sum_probs=38.1
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceee
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIV 212 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~ 212 (323)
..-+||+.-+|..+. ..+.+++.|. ...-.+..+++.++-..+....++
T Consensus 213 f~kRPgvD~FL~~~a-~~yEIVi~ss---e~gmt~~pl~d~lDP~g~IsYkLf 261 (393)
T KOG2832|consen 213 FKKRPGVDYFLGHLA-KYYEIVVYSS---EQGMTVFPLLDALDPKGYISYKLF 261 (393)
T ss_pred eccCchHHHHHHhhc-ccceEEEEec---CCccchhhhHhhcCCcceEEEEEe
Confidence 457899999999998 5699999998 455677778998887766554443
No 296
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=37.54 E-value=2.7e+02 Score=24.95 Aligned_cols=36 Identities=17% Similarity=0.245 Sum_probs=25.3
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK 200 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~ 200 (323)
+...++++.+++.|++.+++-|.. .+.+.++.+++.
T Consensus 116 ~~~~~~~~~~~~~Gl~~~~~v~p~-T~~e~l~~~~~~ 151 (244)
T PRK13125 116 DDLEKYVEIIKNKGLKPVFFTSPK-FPDLLIHRLSKL 151 (244)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCC-CCHHHHHHHHHh
Confidence 577889999999999999888743 233445555543
No 297
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=37.10 E-value=2.4e+02 Score=26.55 Aligned_cols=37 Identities=11% Similarity=0.072 Sum_probs=23.8
Q ss_pred HHHHHHHcCCCCCcEEEEcCChh---hHHHHHHcCCCEEEEc
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQS---GVAGAQRIGMPCVVMR 321 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~---Di~aA~~aG~~~v~v~ 321 (323)
+..++++.. |+=++..||... ...+|+..|++.+.+.
T Consensus 78 l~~~l~~~~--pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~ 117 (365)
T TIGR00236 78 LEELLLEEK--PDIVLVQGDTTTTLAGALAAFYLQIPVGHVE 117 (365)
T ss_pred HHHHHHHcC--CCEEEEeCCchHHHHHHHHHHHhCCCEEEEe
Confidence 444455544 555666688653 5667788899988764
No 298
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=35.88 E-value=31 Score=29.59 Aligned_cols=34 Identities=26% Similarity=0.277 Sum_probs=28.2
Q ss_pred CchhHHHHHHHHHHHHH---cCCCCCcEEEEcCChhh
Q 020675 273 PESLDKIVAALRAGAEY---AEKPVRNCFLIAGSQSG 306 (323)
Q Consensus 273 ~~~~~~~~~~~~~al~~---lgv~p~~~v~VGDs~~D 306 (323)
|.+.+.+..+|+.+++. +|+++++++++|||.-.
T Consensus 46 p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg 82 (211)
T PF07859_consen 46 PAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGG 82 (211)
T ss_dssp THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHH
T ss_pred cccccccccceeeeccccccccccccceEEeeccccc
Confidence 66677777788888777 78999999999999754
No 299
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=35.20 E-value=1.9e+02 Score=27.60 Aligned_cols=32 Identities=25% Similarity=0.447 Sum_probs=23.1
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHH-HHHHcCCCEEEEc
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVA-GAQRIGMPCVVMR 321 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~-aA~~aG~~~v~v~ 321 (323)
|..+++... ++||||. +|. -|-..|.++|-++
T Consensus 252 ~l~ll~~a~------~vvgdSs-GI~eEa~~lg~P~v~iR 284 (346)
T PF02350_consen 252 YLSLLKNAD------LVVGDSS-GIQEEAPSLGKPVVNIR 284 (346)
T ss_dssp HHHHHHHES------EEEESSH-HHHHHGGGGT--EEECS
T ss_pred HHHHHhcce------EEEEcCc-cHHHHHHHhCCeEEEec
Confidence 555565543 7899999 888 8999999999883
No 300
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=35.19 E-value=51 Score=30.79 Aligned_cols=39 Identities=15% Similarity=0.278 Sum_probs=29.1
Q ss_pred ChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCC
Q 020675 163 RPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 203 (323)
Q Consensus 163 ~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl 203 (323)
-||+..+-+.|+..|.++.|+|.. .....++..++.+++
T Consensus 62 P~GA~aLa~aL~~lG~~~~ivtd~--~~~~~~~~~~~~~~~ 100 (291)
T PF14336_consen 62 PPGAAALARALQALGKEVVIVTDE--RCAPVVKAAVRAAGL 100 (291)
T ss_pred hHHHHHHHHHHHHcCCeEEEEECH--HHHHHHHHHHHHHhh
Confidence 469999999999999999999984 233445555555555
No 301
>PRK10537 voltage-gated potassium channel; Provisional
Probab=34.57 E-value=3.5e+02 Score=26.45 Aligned_cols=34 Identities=6% Similarity=0.020 Sum_probs=22.2
Q ss_pred HHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEE
Q 020675 286 GAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVM 320 (323)
Q Consensus 286 al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v 320 (323)
.++.++- .-+++..-++..+.+..+++|...|..
T Consensus 322 ~ar~l~p-~~kIIa~v~~~~~~~~L~~~GaD~VIs 355 (393)
T PRK10537 322 AAKEMSS-DVKTVAAVNDSKNLEKIKRVHPDMIFS 355 (393)
T ss_pred HHHHhCC-CCcEEEEECCHHHHHHHHhcCCCEEEC
Confidence 3455552 235666666677788888888887654
No 302
>PRK14021 bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional
Probab=33.87 E-value=5.3e+02 Score=26.32 Aligned_cols=35 Identities=14% Similarity=0.099 Sum_probs=24.8
Q ss_pred HHcCCCCC-cEEEEcCC-hhhHHHHHH----cCCCEEEEcC
Q 020675 288 EYAEKPVR-NCFLIAGS-QSGVAGAQR----IGMPCVVMRS 322 (323)
Q Consensus 288 ~~lgv~p~-~~v~VGDs-~~Di~aA~~----aG~~~v~v~~ 322 (323)
...+++.. -+|.||.+ ..|+..+-+ .|++.|.|.+
T Consensus 263 ~~~~~~r~D~IIAIGGGsv~D~AKfvA~~y~rGi~~i~vPT 303 (542)
T PRK14021 263 GNEGFTRSDAIVGLGGGAATDLAGFVAATWMRGIRYVNCPT 303 (542)
T ss_pred HhcCCCCCcEEEEEcChHHHHHHHHHHHHHHcCCCEEEeCC
Confidence 44555444 45569986 569888776 5999999876
No 303
>COG1454 EutG Alcohol dehydrogenase, class IV [Energy production and conversion]
Probab=32.70 E-value=3e+02 Score=26.82 Aligned_cols=42 Identities=14% Similarity=0.177 Sum_probs=23.6
Q ss_pred hhHHHHHHHH-HHCC-CcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 164 PGVEDFVDDA-YNEG-IPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 164 pgv~elL~~L-k~~G-i~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
.|..+.+... +..| .+..|+|..+......+..+++.|+...
T Consensus 14 ~g~l~~l~~~~~~~g~~r~liVTd~~~~~~g~~~~v~~~L~~~~ 57 (377)
T COG1454 14 RGSLKELGEEVKRLGAKRALIVTDRGLAKLGLLDKVLDSLDAAG 57 (377)
T ss_pred CChHHHHHHHHHhcCCCceEEEECCccccchhHHHHHHHHHhcC
Confidence 4555544444 4445 6788899853222346666666665544
No 304
>PRK08745 ribulose-phosphate 3-epimerase; Provisional
Probab=32.61 E-value=2e+02 Score=25.69 Aligned_cols=36 Identities=11% Similarity=-0.014 Sum_probs=26.8
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHH
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEK 200 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~ 200 (323)
+...++|+.+|+.|.+.+|+=|.. .+...++.++..
T Consensus 97 ~~~~~~l~~Ir~~g~k~GlalnP~-T~~~~i~~~l~~ 132 (223)
T PRK08745 97 RHVHRTIQLIKSHGCQAGLVLNPA-TPVDILDWVLPE 132 (223)
T ss_pred ccHHHHHHHHHHCCCceeEEeCCC-CCHHHHHHHHhh
Confidence 457899999999999999999854 244555555553
No 305
>PLN02334 ribulose-phosphate 3-epimerase
Probab=32.57 E-value=2.5e+02 Score=24.81 Aligned_cols=27 Identities=22% Similarity=0.238 Sum_probs=20.9
Q ss_pred cEEEEcC-ChhhHHHHHHcCCCEEEEcC
Q 020675 296 NCFLIAG-SQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 296 ~~v~VGD-s~~Di~aA~~aG~~~v~v~~ 322 (323)
.++++|. +..++....++|...+.+.+
T Consensus 176 ~I~a~GGI~~e~i~~l~~aGad~vvvgs 203 (229)
T PLN02334 176 DIEVDGGVGPSTIDKAAEAGANVIVAGS 203 (229)
T ss_pred cEEEeCCCCHHHHHHHHHcCCCEEEECh
Confidence 4566654 57799999999999887754
No 306
>cd06831 PLPDE_III_ODC_like_AZI Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Ornithine Decarboxylase-like Antizyme Inhibitor. Antizyme inhibitor (AZI) is homologous to the fold type III PLP-dependent enzyme ODC but does not retain any decarboxylase activity. Like ODC, AZI is presumed to exist as a homodimer. Antizyme is a regulatory protein that binds directly to the ODC monomer to block its active site, leading to its degradation by the 26S proteasome. AZI binds to Antizyme with a higher affinity than ODC, preventing the formation of the Antizyme-ODC complex. Thus, AZI blocks the ability of Antizyme to promote ODC degradation, which leads to increased ODC enzymatic activity and polyamine levels. AZI also prevents the degradation of other proteins regulated by Antizyme, such as cyclin D1.
Probab=32.48 E-value=4.4e+02 Score=25.61 Aligned_cols=34 Identities=12% Similarity=0.099 Sum_probs=24.9
Q ss_pred HHcCCCCCcEEEEcCC--hhhHHHHHHcCCCEEEEc
Q 020675 288 EYAEKPVRNCFLIAGS--QSGVAGAQRIGMPCVVMR 321 (323)
Q Consensus 288 ~~lgv~p~~~v~VGDs--~~Di~aA~~aG~~~v~v~ 321 (323)
...|+++++++|-|-. ..+++.|.+.|+..+.+-
T Consensus 74 l~~G~~~~~Iif~gp~K~~~~l~~a~~~Gv~~i~vD 109 (394)
T cd06831 74 QELGVSPENIIYTNPCKQASQIKYAAKVGVNIMTCD 109 (394)
T ss_pred HhcCCCcCCEEEeCCCCCHHHHHHHHHCCCCEEEEC
Confidence 3578888888887764 468888888888766543
No 307
>COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism]
Probab=31.66 E-value=3e+02 Score=26.63 Aligned_cols=35 Identities=11% Similarity=0.167 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 165 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 165 gv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
...+.+..|+++|+.+++||+ ..+..-+..||+..
T Consensus 32 ~l~~~ia~L~~~G~eVilVSS------GAiaaG~~~Lg~~~ 66 (369)
T COG0263 32 ELVRQVAALHKAGHEVVLVSS------GAIAAGRTRLGLPK 66 (369)
T ss_pred HHHHHHHHHHhCCCEEEEEcc------chhhhChhhcCCCC
Confidence 456678889999999999998 23455566777754
No 308
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=31.50 E-value=77 Score=28.14 Aligned_cols=13 Identities=31% Similarity=0.516 Sum_probs=7.9
Q ss_pred EEecCCccccccc
Q 020675 88 LLEVDGVLVDAYR 100 (323)
Q Consensus 88 iFD~DGTLid~~~ 100 (323)
+||+||||.+...
T Consensus 1 ~lDyDGTL~p~~~ 13 (235)
T PF02358_consen 1 FLDYDGTLAPIVD 13 (235)
T ss_dssp EEE-TTTSS---S
T ss_pred CcccCCccCCCCC
Confidence 6999999997554
No 309
>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E. This model describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=31.09 E-value=1e+02 Score=29.29 Aligned_cols=26 Identities=23% Similarity=0.264 Sum_probs=21.7
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCC
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYG 187 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~ 187 (323)
++|+..++++.+++.|+.+.+.||..
T Consensus 66 l~~~~~~ii~~~~~~g~~~~l~TNG~ 91 (358)
T TIGR02109 66 ARPDLVELVAHARRLGLYTNLITSGV 91 (358)
T ss_pred ccccHHHHHHHHHHcCCeEEEEeCCc
Confidence 66788889999998899889999853
No 310
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional
Probab=30.95 E-value=1.1e+02 Score=29.28 Aligned_cols=44 Identities=18% Similarity=0.203 Sum_probs=29.3
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
.-++|++.++++.+++.|+.+.+.||...-..+.+ ..+...|++
T Consensus 73 Pll~~~~~~il~~~~~~g~~~~i~TNG~ll~~~~~-~~L~~~g~~ 116 (378)
T PRK05301 73 PLLRKDLEELVAHARELGLYTNLITSGVGLTEARL-AALKDAGLD 116 (378)
T ss_pred cCCchhHHHHHHHHHHcCCcEEEECCCccCCHHHH-HHHHHcCCC
Confidence 34678889999999999999999999532112333 334445554
No 311
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=30.70 E-value=1.1e+02 Score=25.03 Aligned_cols=41 Identities=17% Similarity=0.066 Sum_probs=27.4
Q ss_pred HHHHHHHcCCCCCc-EEEEcCC----h---hhHHHHHHcCCCEEEEcCC
Q 020675 283 LRAGAEYAEKPVRN-CFLIAGS----Q---SGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 283 ~~~al~~lgv~p~~-~v~VGDs----~---~Di~aA~~aG~~~v~v~~g 323 (323)
|+..++.+|++++. +|+.+++ . .-.-+++.+|..-|.+..|
T Consensus 83 ~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v~ildG 131 (138)
T cd01445 83 FAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDVAILDG 131 (138)
T ss_pred HHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCeEEeCC
Confidence 78889999998775 5556653 1 2334566788877766543
No 312
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.
Probab=30.21 E-value=1.1e+02 Score=22.37 Aligned_cols=38 Identities=21% Similarity=0.254 Sum_probs=28.0
Q ss_pred HHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccc
Q 020675 166 VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (323)
Q Consensus 166 v~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd 208 (323)
..++.+.++++|..+.+..- ...+...++.+|+.+++.
T Consensus 59 L~~l~~~~~~~g~~v~i~~~-----~~~~~~~l~~~gl~~~~~ 96 (99)
T cd07043 59 LLGAYKRARAAGGRLVLVNV-----SPAVRRVLELTGLDRLFP 96 (99)
T ss_pred HHHHHHHHHHcCCeEEEEcC-----CHHHHHHHHHhCcceeee
Confidence 34566778888888766643 367888999999987765
No 313
>TIGR03151 enACPred_II putative enoyl-(acyl-carrier-protein) reductase II. This oxidoreductase of the 2-nitropropane dioxygenase family (pfam03060) is commonly found in apparent operons with genes involved in fatty acid biosynthesis. Furthermore, this genomic context generally includes the fabG 3-oxoacyl-[ACP] reductase and lacks the fabI enoyl-[ACP] reductase.
Probab=30.07 E-value=2.7e+02 Score=26.08 Aligned_cols=37 Identities=22% Similarity=0.295 Sum_probs=27.3
Q ss_pred HHHHHHHcCCCCCcEEEEcCC--hhhHHHHHHcCCCEEEEcC
Q 020675 283 LRAGAEYAEKPVRNCFLIAGS--QSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs--~~Di~aA~~aG~~~v~v~~ 322 (323)
+..+.+..+++ ++.-|+- ..|+.+|...|...|++.+
T Consensus 153 l~~v~~~~~iP---viaaGGI~~~~~~~~al~~GA~gV~iGt 191 (307)
T TIGR03151 153 VPQVVDAVSIP---VIAAGGIADGRGMAAAFALGAEAVQMGT 191 (307)
T ss_pred HHHHHHHhCCC---EEEECCCCCHHHHHHHHHcCCCEeecch
Confidence 45566666544 6777763 5789999999999998765
No 314
>TIGR02886 spore_II_AA anti-sigma F factor antagonist. The anti-sigma F factor antagonist, also called stage II sporulation protein AA, is a protein universal among endospore-forming bacteria, all of which belong to the Firmcutes
Probab=29.95 E-value=1.1e+02 Score=23.24 Aligned_cols=36 Identities=22% Similarity=0.206 Sum_probs=28.7
Q ss_pred HHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCcccc
Q 020675 168 DFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISK 208 (323)
Q Consensus 168 elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd 208 (323)
.+.+.++++|.++.++.- ...+...++..|+.+.+.
T Consensus 62 ~~~~~~~~~g~~l~l~~~-----~~~v~~~l~~~gl~~~~~ 97 (106)
T TIGR02886 62 GRYKKIKNEGGEVIVCNV-----SPAVKRLFELSGLFKIIR 97 (106)
T ss_pred HHHHHHHHcCCEEEEEeC-----CHHHHHHHHHhCCceEEE
Confidence 456778889998887754 477889999999988775
No 315
>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.
Probab=29.45 E-value=52 Score=29.60 Aligned_cols=26 Identities=15% Similarity=0.207 Sum_probs=22.7
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCC
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYG 187 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~ 187 (323)
++++..++++.+++.|+++.|.||..
T Consensus 85 l~~~l~~li~~l~~~g~~v~leTNGt 110 (238)
T TIGR03365 85 LQKPLGELIDLGKAKGYRFALETQGS 110 (238)
T ss_pred hhHhHHHHHHHHHHCCCCEEEECCCC
Confidence 45688899999999999999999953
No 316
>PRK09348 glyQ glycyl-tRNA synthetase subunit alpha; Validated
Probab=29.15 E-value=57 Score=29.91 Aligned_cols=47 Identities=21% Similarity=0.073 Sum_probs=35.8
Q ss_pred cCCCccccCCCCchhHHHHHHHHHHHHHcCCCCC--cEEEEcCCh-hhHHHHHHcCCCEE
Q 020675 262 LKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR--NCFLIAGSQ-SGVAGAQRIGMPCV 318 (323)
Q Consensus 262 ~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~--~~v~VGDs~-~Di~aA~~aG~~~v 318 (323)
.||+|+= +...|..-++.+|++|. ++-||.|.. +-..+|...|+.+.
T Consensus 84 lKPsP~n----------iQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWEVW 133 (283)
T PRK09348 84 LKPSPDN----------IQELYLGSLEALGIDPLEHDIRFVEDNWESPTLGAWGLGWEVW 133 (283)
T ss_pred EcCCCcc----------HHHHHHHHHHHhCCCccccceeEeecCCCCCcccccccceEEE
Confidence 4888864 22238888999999875 699999984 67888888888653
No 317
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=28.45 E-value=88 Score=28.31 Aligned_cols=37 Identities=14% Similarity=0.223 Sum_probs=29.9
Q ss_pred hHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 165 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 165 gv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
.+.+++.+|++.|++++.+|+. ....+...-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSK---T~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSK---TRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccc---hHHHHHHHHHhcCCC
Confidence 4678999999999999999994 356666677778876
No 318
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=28.32 E-value=83 Score=24.57 Aligned_cols=24 Identities=13% Similarity=0.081 Sum_probs=21.4
Q ss_pred ChhHHHHHHHHHHCCCcEEEEcCC
Q 020675 163 RPGVEDFVDDAYNEGIPLIVLTAY 186 (323)
Q Consensus 163 ~pgv~elL~~Lk~~Gi~l~ivTn~ 186 (323)
.+.+.+.++.++++|.+++.+|+.
T Consensus 59 t~e~~~~~~~a~~~g~~vi~iT~~ 82 (126)
T cd05008 59 TADTLAALRLAKEKGAKTVAITNV 82 (126)
T ss_pred CHHHHHHHHHHHHcCCeEEEEECC
Confidence 457889999999999999999994
No 319
>cd00733 GlyRS_alpha_core Class II Glycyl-tRNA synthetase (GlyRS) alpha subunit core catalytic domain. GlyRS functions as a homodimer in eukaryotes, archaea and some bacteria and as a heterotetramer in the remainder of prokaryotes and in arabidopsis. It is responsible for the attachment of glycine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. This alignment contains only sequences from the GlyRS form which heterotetramerizes. The homodimer form of GlyRS is in a different family of class II aaRS. Class II assignment is based upon structure and the presence of three characteristic sequence motifs.
Probab=28.28 E-value=63 Score=29.61 Aligned_cols=47 Identities=19% Similarity=0.094 Sum_probs=35.9
Q ss_pred cCCCccccCCCCchhHHHHHHHHHHHHHcCCCCC--cEEEEcCCh-hhHHHHHHcCCCEE
Q 020675 262 LKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR--NCFLIAGSQ-SGVAGAQRIGMPCV 318 (323)
Q Consensus 262 ~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~--~~v~VGDs~-~Di~aA~~aG~~~v 318 (323)
.||+|+= +.+.|..-++.+|++|. ++-||.|.. +-..+|...|+.+.
T Consensus 80 iKPsP~n----------iQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGLGWEVW 129 (279)
T cd00733 80 IKPSPDN----------IQELYLESLEALGINPKEHDIRFVEDNWESPTLGAWGLGWEVW 129 (279)
T ss_pred ECCCCcc----------HHHHHHHHHHHhCCCccccCeeEeecCCCCCcccccccccEEE
Confidence 4888864 22238888999999875 699999984 67888888888754
No 320
>COG0191 Fba Fructose/tagatose bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=28.09 E-value=4.4e+02 Score=24.66 Aligned_cols=38 Identities=26% Similarity=0.313 Sum_probs=29.3
Q ss_pred HHHHHHHcCCCCCcEEEEc--CChhhHHHHHHcCCCEEEEcC
Q 020675 283 LRAGAEYAEKPVRNCFLIA--GSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VG--Ds~~Di~aA~~aG~~~v~v~~ 322 (323)
....++.++++. +++-+ ++..++..|.++|+..+++-.
T Consensus 67 v~~~a~~~~vPV--~lHlDHg~~~~~~~~ai~~GFsSvMiDg 106 (286)
T COG0191 67 VKALAEKYGVPV--ALHLDHGASFEDCKQAIRAGFSSVMIDG 106 (286)
T ss_pred HHHHHHHCCCCE--EEECCCCCCHHHHHHHHhcCCceEEecC
Confidence 466778888664 55654 467899999999999999753
No 321
>PRK05752 uroporphyrinogen-III synthase; Validated
Probab=27.13 E-value=2.1e+02 Score=25.77 Aligned_cols=23 Identities=13% Similarity=0.007 Sum_probs=17.8
Q ss_pred CCChhHHHHHHHHHHCCCcEEEE
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVL 183 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~iv 183 (323)
.+.++..++.+.|++.|+.+..+
T Consensus 10 Rp~~~~~~l~~~l~~~G~~~~~~ 32 (255)
T PRK05752 10 RPAEECAALAASLAEAGIFSSSL 32 (255)
T ss_pred CcHHHHHHHHHHHHHcCCCEEEc
Confidence 36677888888888888877765
No 322
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=27.13 E-value=4.1e+02 Score=22.91 Aligned_cols=106 Identities=13% Similarity=0.089 Sum_probs=53.2
Q ss_pred HHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccceeechhhhhhhhhcccccccccccCcchhHHHHHHHH
Q 020675 167 EDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKIKIVGNEEVERSLYGQFVLGKGISSGVDEQLATEARKA 246 (323)
Q Consensus 167 ~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~~v~s~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~k~ 246 (323)
+..++.|++.+..-+|+|. ....-...+.+|+....-..++-+.....+
T Consensus 61 ~~~i~~L~~~~~~dGIIST-----k~~~i~~Ak~~gl~tIqRiFliDS~al~~~-------------------------- 109 (175)
T PF04309_consen 61 EAGIEYLKEYGKPDGIIST-----KSNLIKRAKKLGLLTIQRIFLIDSSALETG-------------------------- 109 (175)
T ss_dssp HHHHHHHHHTT--SEEEES-----SHHHHHHHHHTT-EEEEEEE-SSHHHHHHH--------------------------
T ss_pred HHHHHHHHHcCCCcEEEeC-----CHHHHHHHHHcCCEEEEEeeeecHHHHHHH--------------------------
Confidence 3456667777667788887 244556666778765444333322222221
Q ss_pred hhHHHHHHHHHHHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEc---CChhhHHHHHHcCCCEEEEc
Q 020675 247 VSAQKQEIAEEVASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIA---GSQSGVAGAQRIGMPCVVMR 321 (323)
Q Consensus 247 ~s~~~~~i~~~v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VG---Ds~~Di~aA~~aG~~~v~v~ 321 (323)
.+.....|||--=-.|. + .-++.+++.-..+--+.-| ++..|+..|.++|...|-..
T Consensus 110 ---------~~~i~~~~PD~vEilPg------~---~p~vi~~i~~~~~~PiIAGGLI~~~e~v~~al~aGa~aVSTS 169 (175)
T PF04309_consen 110 ---------IKQIEQSKPDAVEILPG------V---MPKVIKKIREETNIPIIAGGLIRTKEDVEEALKAGADAVSTS 169 (175)
T ss_dssp ---------HHHHHHHT-SEEEEESC------C---HHHHHCCCCCCCSS-EEEESS--SHHHHHHHCCTTCEEEEE-
T ss_pred ---------HHHHhhcCCCEEEEchH------H---HHHHHHHHHHhcCCCEEeecccCCHHHHHHHHHcCCEEEEcC
Confidence 01112347773211111 0 3445555554444445555 45679999999999877543
No 323
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=26.96 E-value=2.8e+02 Score=24.99 Aligned_cols=36 Identities=0% Similarity=-0.114 Sum_probs=26.3
Q ss_pred hhHHHHHHHHHHCCC--cEEEEcCCCCCChHHHHHHHHH
Q 020675 164 PGVEDFVDDAYNEGI--PLIVLTAYGKSGDRIARSVVEK 200 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi--~l~ivTn~~~~~~~~~~~~l~~ 200 (323)
+...++|+.+|+.|. +.+++=|.. .+-..++.++..
T Consensus 103 ~~~~~~l~~Ik~~g~~~kaGlalnP~-Tp~~~i~~~l~~ 140 (228)
T PRK08091 103 HDLALTIEWLAKQKTTVLIGLCLCPE-TPISLLEPYLDQ 140 (228)
T ss_pred ccHHHHHHHHHHCCCCceEEEEECCC-CCHHHHHHHHhh
Confidence 467899999999999 999988854 244555555554
No 324
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=26.42 E-value=4.9e+02 Score=23.63 Aligned_cols=25 Identities=24% Similarity=0.190 Sum_probs=20.0
Q ss_pred EEEcCCh---hhHHHHHHcCCCEEEEcC
Q 020675 298 FLIAGSQ---SGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 298 v~VGDs~---~Di~aA~~aG~~~v~v~~ 322 (323)
++||-+. .++..+.++|...|.|.+
T Consensus 201 i~vgfGI~~~e~~~~~~~~GADgvVvGS 228 (256)
T TIGR00262 201 VLVGFGISKPEQVKQAIDAGADGVIVGS 228 (256)
T ss_pred EEEeCCCCCHHHHHHHHHcCCCEEEECH
Confidence 7777654 589999999999888865
No 325
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=26.33 E-value=63 Score=23.22 Aligned_cols=21 Identities=10% Similarity=-0.007 Sum_probs=15.7
Q ss_pred HHHHHHHcCCCCCcEEEEcCC
Q 020675 283 LRAGAEYAEKPVRNCFLIAGS 303 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs 303 (323)
...+|++.|+.+.++|.|||-
T Consensus 45 v~~~L~~~G~~~GD~V~Ig~~ 65 (69)
T PF09269_consen 45 VEKALRKAGAKEGDTVRIGDY 65 (69)
T ss_dssp HHHHHHTTT--TT-EEEETTE
T ss_pred HHHHHHHcCCCCCCEEEEcCE
Confidence 677889999999999999984
No 326
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=25.98 E-value=95 Score=26.82 Aligned_cols=22 Identities=5% Similarity=-0.053 Sum_probs=11.6
Q ss_pred HHHHcCCCCCcEEEEcCChhhH
Q 020675 286 GAEYAEKPVRNCFLIAGSQSGV 307 (323)
Q Consensus 286 al~~lgv~p~~~v~VGDs~~Di 307 (323)
-+.++|++++++...||-.-|.
T Consensus 163 r~~~lG~~~~~v~v~GnlKfd~ 184 (186)
T PF04413_consen 163 RFRKLGAPPERVHVTGNLKFDQ 184 (186)
T ss_dssp HHHTTT-S--SEEE---GGG--
T ss_pred HHHHcCCCcceEEEeCcchhcc
Confidence 3578999999999999977665
No 327
>TIGR00388 glyQ glycyl-tRNA synthetase, tetrameric type, alpha subunit. This tetrameric form of glycyl-tRNA synthetase (2 alpha, 2 beta) is found in the majority of completed eubacterial genomes, with the two genes fused in a few species. A substantially different homodimeric form (not recognized by this model) replaces this form in the Archaea, animals, yeasts, and some eubacteria.
Probab=25.94 E-value=73 Score=29.41 Aligned_cols=47 Identities=15% Similarity=0.041 Sum_probs=35.8
Q ss_pred cCCCccccCCCCchhHHHHHHHHHHHHHcCCCCC--cEEEEcCCh-hhHHHHHHcCCCEE
Q 020675 262 LKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR--NCFLIAGSQ-SGVAGAQRIGMPCV 318 (323)
Q Consensus 262 ~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~--~~v~VGDs~-~Di~aA~~aG~~~v 318 (323)
.||+|+= +.+.|..-++.+|++|. ++-||.|.. +-..+|.-.|+.+.
T Consensus 81 lKPsP~n----------iQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWEVW 130 (293)
T TIGR00388 81 IKPSPDN----------IQELYLDSLRALGIDPTEHDIRFVEDNWENPTLGAWGLGWEVW 130 (293)
T ss_pred ECCCCcc----------HHHHHHHHHHHhCCCccccCeeEeecCCCCCcccccccccEEE
Confidence 4888864 12238888999999875 699999984 67888888888653
No 328
>cd04906 ACT_ThrD-I_1 First of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase). This CD includes the first of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=25.66 E-value=1.2e+02 Score=22.42 Aligned_cols=22 Identities=14% Similarity=0.374 Sum_probs=19.1
Q ss_pred hhHHHHHHHHHHCCCcEEEEcC
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTA 185 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn 185 (323)
....++++.|+++|+++.++|+
T Consensus 53 ~~~~~i~~~L~~~G~~~~~~~~ 74 (85)
T cd04906 53 EELAELLEDLKSAGYEVVDLSD 74 (85)
T ss_pred HHHHHHHHHHHHCCCCeEECCC
Confidence 4478899999999999998887
No 329
>PF10113 Fibrillarin_2: Fibrillarin-like archaeal protein; InterPro: IPR016760 Members of this protein family are HmdC, whose gene regularly occurs in the context of genes for HmdA (5,10-methenyltetrahydromethanopterin hydrogenase) and the radical SAM protein HmdB involved in biosynthesis of the HmdA cofactor. Bioinformatics suggests this protein, a homologue of eukaryotic fibrillarin, may be involved in biosynthesis of the guanylyl pyridinol cofactor in HmdA.
Probab=25.49 E-value=1.9e+02 Score=28.66 Aligned_cols=41 Identities=12% Similarity=0.141 Sum_probs=30.8
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhh----HHHHHHcCCCEEEEcCC
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSG----VAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~D----i~aA~~aG~~~v~v~~g 323 (323)
...+++++|--.+-+++|||+..| +.++...|+.+..|..|
T Consensus 211 Va~~Akk~gkGveaI~~vGDGyddLI~G~~a~id~~vDvfVvEGg 255 (505)
T PF10113_consen 211 VAELAKKYGKGVEAIMHVGDGYDDLITGLKACIDMGVDVFVVEGG 255 (505)
T ss_pred HHHHHHHhCCCceEEEEecCChHHHHHHHHHHHhcCCcEEEEeCC
Confidence 346678899888999999999765 55666667777776543
No 330
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=25.36 E-value=77 Score=24.85 Aligned_cols=25 Identities=16% Similarity=0.299 Sum_probs=22.1
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCC
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAY 186 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~ 186 (323)
-.+.+.++++.++++|.+++.+|+.
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~ 83 (128)
T cd05014 59 ETDELLNLLPHLKRRGAPIIAITGN 83 (128)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3468899999999999999999994
No 331
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=25.36 E-value=5.7e+02 Score=24.01 Aligned_cols=24 Identities=13% Similarity=0.189 Sum_probs=14.2
Q ss_pred EEEcCChhhHHHHHHcCCCEEEEc
Q 020675 298 FLIAGSQSGVAGAQRIGMPCVVMR 321 (323)
Q Consensus 298 v~VGDs~~Di~aA~~aG~~~v~v~ 321 (323)
++||...-=+..|.+.|.++|.+-
T Consensus 265 l~v~nDSGp~HlAaA~g~P~v~lf 288 (352)
T PRK10422 265 LFIGVDSAPAHIAAAVNTPLICLF 288 (352)
T ss_pred EEEecCCHHHHHHHHcCCCEEEEE
Confidence 556533333455667788887653
No 332
>COG2237 Predicted membrane protein [Function unknown]
Probab=25.32 E-value=2.4e+02 Score=27.20 Aligned_cols=22 Identities=0% Similarity=-0.055 Sum_probs=15.1
Q ss_pred HHHHHHcCCCCCcEEEEcCChhhH
Q 020675 284 RAGAEYAEKPVRNCFLIAGSQSGV 307 (323)
Q Consensus 284 ~~al~~lgv~p~~~v~VGDs~~Di 307 (323)
...++.+ +|+.+++|.|+..|=
T Consensus 91 d~vl~~~--~pd~av~VsDGaeDe 112 (364)
T COG2237 91 DEVLSEL--DPDDAVVVSDGAEDE 112 (364)
T ss_pred HHHHHcC--CCcEEEEeccCcccc
Confidence 3444444 577899999998773
No 333
>TIGR00377 ant_ant_sig anti-anti-sigma factor. This superfamily includes small (105-125 residue) proteins related to SpoIIAA of Bacillus subtilis, an anti-anti-sigma factor. SpoIIAA can bind to and inhibit the anti-sigma F factor SpoIIAB. Also, it can be phosphorylated by SpoIIAB on a Ser residue at position 59 of the seed alignment. A similar arrangement is inferred for RsbV, an anti-anti-sigma factor for sigma B. This Ser is fairly well conserved within a motif resembling MXS[STA]G[VIL]X[VIL][VILF] among homologous known or predicted anti-anti-sigma factors. Regions similar to SpoIIAA and apparently homologous, but differing considerably near the phosphorlated Ser of SpoIIAA, appear in a single copy in several longer proteins.
Probab=25.29 E-value=1.3e+02 Score=22.61 Aligned_cols=38 Identities=16% Similarity=0.149 Sum_probs=28.9
Q ss_pred HHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccccc
Q 020675 167 EDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERISKI 209 (323)
Q Consensus 167 ~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~ 209 (323)
.++.+.++++|..+.++.- ...+..+++..|+...++.
T Consensus 65 ~~~~~~~~~~~~~~~l~~~-----~~~~~~~l~~~~l~~~~~i 102 (108)
T TIGR00377 65 LGRYKQVRRVGGQLVLVSV-----SPRVARLLDITGLLRIIPI 102 (108)
T ss_pred HHHHHHHHhcCCEEEEEeC-----CHHHHHHHHHhChhheecc
Confidence 3455667888888877764 4678889999999987774
No 334
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=24.76 E-value=6e+02 Score=24.23 Aligned_cols=26 Identities=27% Similarity=0.464 Sum_probs=21.8
Q ss_pred EEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 297 CFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 297 ~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
-++||||...+..|-..|.++|-++.
T Consensus 283 ~~vitdSSggi~EA~~lg~Pvv~l~~ 308 (365)
T TIGR03568 283 DAVIGNSSSGIIEAPSFGVPTINIGT 308 (365)
T ss_pred CEEEEcChhHHHhhhhcCCCEEeecC
Confidence 37889998888999999999987754
No 335
>TIGR03278 methan_mark_10 putative methanogenesis marker protein 10. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The presence of motifs with seven invariant Cys residues in the N-terminal 50 residues, including three instances of CXXC, would be consistent with function as an oxidoreductase with FeS clusters. The exact function is unknown, but likely is linked to methanogenesis. In most genomes, the member of this family is encoded by a gene next to, and divergently transcribed from, the methyl coenzyme M reductase operon.
Probab=24.58 E-value=1.7e+02 Score=28.71 Aligned_cols=46 Identities=15% Similarity=0.174 Sum_probs=30.4
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEE-cCCCCCChHHHHHHHHHcCCCc
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVL-TAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~iv-Tn~~~~~~~~~~~~l~~lgl~~ 205 (323)
.-.+|.+.++|+.+++.|+++++. ||...-........+..+|++.
T Consensus 85 pl~~~~l~eLl~~lk~~gi~taI~~TnG~~l~~~e~~~~L~~~gld~ 131 (404)
T TIGR03278 85 VSCYPELEELTKGLSDLGLPIHLGYTSGKGFDDPEIAEFLIDNGVRE 131 (404)
T ss_pred cccCHHHHHHHHHHHhCCCCEEEeCCCCcccCCHHHHHHHHHcCCCE
Confidence 447899999999999999999995 9842101222233344456654
No 336
>COG1180 PflA Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones]
Probab=24.52 E-value=1.5e+02 Score=27.20 Aligned_cols=27 Identities=15% Similarity=-0.038 Sum_probs=23.3
Q ss_pred CCChhHHHHHHHHHHCCCcEEEEcCCC
Q 020675 161 PLRPGVEDFVDDAYNEGIPLIVLTAYG 187 (323)
Q Consensus 161 ~l~pgv~elL~~Lk~~Gi~l~ivTn~~ 187 (323)
...+.+.++++.+++.|+++++.||.-
T Consensus 96 ~q~e~~~~~~~~ake~Gl~~~l~TnG~ 122 (260)
T COG1180 96 LQAEFALDLLRAAKERGLHVALDTNGF 122 (260)
T ss_pred hhHHHHHHHHHHHHHCCCcEEEEcCCC
Confidence 356678899999999999999999954
No 337
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=23.56 E-value=58 Score=23.15 Aligned_cols=25 Identities=0% Similarity=-0.134 Sum_probs=15.4
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHH
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQ 311 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~ 311 (323)
....++++|+ .|++||...|++...
T Consensus 7 VqQLLK~fG~----~IY~gdr~~DielM~ 31 (62)
T PF06014_consen 7 VQQLLKKFGI----IIYVGDRLWDIELME 31 (62)
T ss_dssp HHHHHHTTS---------S-HHHHHHHHH
T ss_pred HHHHHHHCCE----EEEeCChHHHHHHHH
Confidence 4567899986 689999999998754
No 338
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=23.49 E-value=96 Score=22.28 Aligned_cols=21 Identities=10% Similarity=-0.035 Sum_probs=18.8
Q ss_pred HHHHHHHcCCCCCcEEEEcCC
Q 020675 283 LRAGAEYAEKPVRNCFLIAGS 303 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs 303 (323)
...+|++.|+.+.++|.|||-
T Consensus 45 v~~~L~~~G~~~GD~V~Ig~~ 65 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIGDF 65 (69)
T ss_pred HHHHHHHcCCCCCCEEEEccE
Confidence 678899999999999999983
No 339
>PRK11303 DNA-binding transcriptional regulator FruR; Provisional
Probab=23.16 E-value=5.7e+02 Score=23.21 Aligned_cols=36 Identities=3% Similarity=-0.201 Sum_probs=21.0
Q ss_pred HHHHHHcCCC-CCcEEEEcCChhhHHHHHHcCCCEEE
Q 020675 284 RAGAEYAEKP-VRNCFLIAGSQSGVAGAQRIGMPCVV 319 (323)
Q Consensus 284 ~~al~~lgv~-p~~~v~VGDs~~Di~aA~~aG~~~v~ 319 (323)
..++...|+. |+++-++|....++.....-++.+|.
T Consensus 254 ~~al~~~g~~vP~disv~gfd~~~~~~~~~p~lttv~ 290 (328)
T PRK11303 254 LDVLLERPGELPSDLAIATFGDNELLDFLPCPVNAVA 290 (328)
T ss_pred HHHHHHcCCCCCCceEEEEeCChHHHhccCCCceEEe
Confidence 3566677874 78887777653444333334555553
No 340
>PRK11145 pflA pyruvate formate lyase-activating enzyme 1; Provisional
Probab=23.15 E-value=1.7e+02 Score=26.05 Aligned_cols=25 Identities=28% Similarity=0.302 Sum_probs=21.2
Q ss_pred CChh-HHHHHHHHHHCCCcEEEEcCC
Q 020675 162 LRPG-VEDFVDDAYNEGIPLIVLTAY 186 (323)
Q Consensus 162 l~pg-v~elL~~Lk~~Gi~l~ivTn~ 186 (323)
+.++ +.++++.+++.|+++++.||.
T Consensus 83 l~~~~~~~l~~~~k~~g~~i~l~TNG 108 (246)
T PRK11145 83 LQAEFVRDWFRACKKEGIHTCLDTNG 108 (246)
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 4666 468999999999999999995
No 341
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=22.88 E-value=45 Score=32.01 Aligned_cols=19 Identities=11% Similarity=-0.032 Sum_probs=15.6
Q ss_pred CCCceEEEEecCCcccccc
Q 020675 81 PPRDLAVLLEVDGVLVDAY 99 (323)
Q Consensus 81 ~~~~kaViFD~DGTLid~~ 99 (323)
...+++|-||||.||+.-.
T Consensus 9 l~~i~~~GFDmDyTLa~Y~ 27 (343)
T TIGR02244 9 LEKIQVFGFDMDYTLAQYK 27 (343)
T ss_pred cccCCEEEECccccccccC
Confidence 4568899999999999643
No 342
>cd04795 SIS SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=22.84 E-value=96 Score=22.21 Aligned_cols=22 Identities=27% Similarity=0.356 Sum_probs=19.8
Q ss_pred ChhHHHHHHHHHHCCCcEEEEc
Q 020675 163 RPGVEDFVDDAYNEGIPLIVLT 184 (323)
Q Consensus 163 ~pgv~elL~~Lk~~Gi~l~ivT 184 (323)
.+.+.++++.++++|.+++.+|
T Consensus 60 t~~~~~~~~~a~~~g~~ii~it 81 (87)
T cd04795 60 TEELLAALEIAKELGIPVIAIT 81 (87)
T ss_pred CHHHHHHHHHHHHcCCeEEEEe
Confidence 4679999999999999999887
No 343
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=22.57 E-value=1.6e+02 Score=23.92 Aligned_cols=45 Identities=11% Similarity=0.008 Sum_probs=27.6
Q ss_pred ChhHHHHHHHHHHCCC-cEEEEcCCCCCChHHHHHHHHHcCCCccccc
Q 020675 163 RPGVEDFVDDAYNEGI-PLIVLTAYGKSGDRIARSVVEKLGSERISKI 209 (323)
Q Consensus 163 ~pgv~elL~~Lk~~Gi-~l~ivTn~~~~~~~~~~~~l~~lgl~~~fd~ 209 (323)
.+.+.++++.|+++|. .+.|+-+. .....-...++.+|++.+|..
T Consensus 67 ~~~~~~~~~~L~~~g~~~i~vivGG--~~~~~~~~~l~~~Gvd~~~~~ 112 (132)
T TIGR00640 67 LTLVPALRKELDKLGRPDILVVVGG--VIPPQDFDELKEMGVAEIFGP 112 (132)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEeC--CCChHhHHHHHHCCCCEEECC
Confidence 3467788888888875 23233331 123334456888999988763
No 344
>PF01861 DUF43: Protein of unknown function DUF43; InterPro: IPR002723 This family of prokaryotic proteins have not been characterised. All the members are 350-400 amino acids long.; PDB: 2QM3_A.
Probab=22.45 E-value=3.4e+02 Score=24.78 Aligned_cols=62 Identities=11% Similarity=0.033 Sum_probs=29.3
Q ss_pred HHhhcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCCcEEEEcCC-hhhHHHHHHcCCCEEEE
Q 020675 258 VASMLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVRNCFLIAGS-QSGVAGAQRIGMPCVVM 320 (323)
Q Consensus 258 v~~~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~~~v~VGDs-~~Di~aA~~aG~~~v~v 320 (323)
+..+.+|..+++...-.+...+.. -..++++..+.-.+++++||. ..-|..|....-.-|.|
T Consensus 10 ~~~RP~~~~~~DQ~~~T~eT~~~R-a~~~~~~gdL~gk~il~lGDDDLtSlA~al~~~~~~I~V 72 (243)
T PF01861_consen 10 VKNRPEPDVELDQGYATPETTLRR-AALMAERGDLEGKRILFLGDDDLTSLALALTGLPKRITV 72 (243)
T ss_dssp HTT-----GGGT---B-HHHHHHH-HHHHHHTT-STT-EEEEES-TT-HHHHHHHHT--SEEEE
T ss_pred HHcCCCCccccccccccHHHHHHH-HHHHHhcCcccCCEEEEEcCCcHHHHHHHhhCCCCeEEE
Confidence 344557777776555444444322 234456666889999999986 56777776554445544
No 345
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=22.22 E-value=2.2e+02 Score=22.51 Aligned_cols=45 Identities=9% Similarity=0.015 Sum_probs=27.8
Q ss_pred CChhHHHHHHHHHHCCC-cE-EEEcCCCCCChHHHHHHHHHcCCCccccc
Q 020675 162 LRPGVEDFVDDAYNEGI-PL-IVLTAYGKSGDRIARSVVEKLGSERISKI 209 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi-~l-~ivTn~~~~~~~~~~~~l~~lgl~~~fd~ 209 (323)
..+.++++++.|++.|. .+ .++-+. ........+..+|++.+|..
T Consensus 63 ~~~~~~~~~~~L~~~~~~~i~i~~GG~---~~~~~~~~~~~~G~d~~~~~ 109 (122)
T cd02071 63 HMTLFPEVIELLRELGAGDILVVGGGI---IPPEDYELLKEMGVAEIFGP 109 (122)
T ss_pred hHHHHHHHHHHHHhcCCCCCEEEEECC---CCHHHHHHHHHCCCCEEECC
Confidence 45577888999998855 32 233321 22333455667899887764
No 346
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=22.02 E-value=1.2e+02 Score=25.12 Aligned_cols=40 Identities=20% Similarity=0.451 Sum_probs=28.8
Q ss_pred hHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCCccc
Q 020675 165 GVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSERIS 207 (323)
Q Consensus 165 gv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~~~f 207 (323)
++.++=+.|++.|+++.++.+ .....+..+++.+++...+
T Consensus 54 sL~~L~~~L~~~g~~L~v~~g---~~~~~l~~l~~~~~~~~V~ 93 (165)
T PF00875_consen 54 SLADLQESLRKLGIPLLVLRG---DPEEVLPELAKEYGATAVY 93 (165)
T ss_dssp HHHHHHHHHHHTTS-EEEEES---SHHHHHHHHHHHHTESEEE
T ss_pred HHHHHHHHHHhcCcceEEEec---chHHHHHHHHHhcCcCeeE
Confidence 566666778888888888888 5667777777778876544
No 347
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=21.90 E-value=3.1e+02 Score=25.73 Aligned_cols=37 Identities=19% Similarity=0.161 Sum_probs=25.0
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcCC
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~g 323 (323)
+..++++.|. .++.| |+..||...-=.|..+|+|+.|
T Consensus 230 L~eiA~~~g~---~aylI-d~~~ei~~~w~~~~~~VGvTAG 266 (294)
T COG0761 230 LAEIAKRHGK---PAYLI-DDAEEIDPEWLKGVKTVGVTAG 266 (294)
T ss_pred HHHHHHHhCC---CeEEe-CChHhCCHHHhcCccEEEEecC
Confidence 5677778876 34555 4456677777777778887765
No 348
>PRK09423 gldA glycerol dehydrogenase; Provisional
Probab=21.80 E-value=5.5e+02 Score=24.49 Aligned_cols=30 Identities=23% Similarity=0.345 Sum_probs=21.6
Q ss_pred CCCcEEEEcCC-hhhHHHHHH--cCCCEEEEcC
Q 020675 293 PVRNCFLIAGS-QSGVAGAQR--IGMPCVVMRS 322 (323)
Q Consensus 293 ~p~~~v~VGDs-~~Di~aA~~--aG~~~v~v~~ 322 (323)
.++-+|.||.+ ..|+.-+-+ .|++.|.|.+
T Consensus 84 ~~d~IIavGGGsv~D~aK~iA~~~~~p~i~IPT 116 (366)
T PRK09423 84 GCDVVIGIGGGKTLDTAKAVADYLGVPVVIVPT 116 (366)
T ss_pred CCCEEEEecChHHHHHHHHHHHHcCCCEEEeCC
Confidence 46778889975 568765544 3788888865
No 349
>PF05240 APOBEC_C: APOBEC-like C-terminal domain; InterPro: IPR007904 This domain is found at the C terminus of the Apolipoprotein B mRNA editing enzyme. Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. C to U RNA editing of mammalian apolipoprotein B (apoB) RNA is a site-specific posttranscriptional modification in which a single cytidine is enzymatically deaminated to uridine, thereby generating a UAA stop codon in the edited mRNA. The function of this domain is currently unknown.; GO: 0008270 zinc ion binding, 0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines; PDB: 2NYT_D.
Probab=21.79 E-value=1e+02 Score=21.34 Aligned_cols=22 Identities=14% Similarity=0.271 Sum_probs=16.7
Q ss_pred hhHHHHHHHHHHCCCcEEEEcC
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTA 185 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn 185 (323)
|+-++-|..|.++|++|.|+|-
T Consensus 2 ~~~qegLr~L~~aG~~v~iM~~ 23 (55)
T PF05240_consen 2 PDYQEGLRRLCQAGAQVSIMTY 23 (55)
T ss_dssp HHHHHHHHHHHHTT-EEEE--H
T ss_pred cHHHHHHHHHHHCCCeEEecCc
Confidence 5678889999999999999986
No 350
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=21.64 E-value=4.7e+02 Score=24.86 Aligned_cols=39 Identities=10% Similarity=0.152 Sum_probs=26.4
Q ss_pred HHHHHHHcCCCCCcEEEEcCChh---hHHHHHHcCCCEEEEcCC
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQS---GVAGAQRIGMPCVVMRSR 323 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~---Di~aA~~aG~~~v~v~~g 323 (323)
+..++++. .|+=+++.||+.. -..+|...+++.+.+..|
T Consensus 59 ~~~~~~~~--~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaG 100 (346)
T PF02350_consen 59 LADVLERE--KPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAG 100 (346)
T ss_dssp HHHHHHHH--T-SEEEEETTSHHHHHHHHHHHHTT-EEEEES--
T ss_pred HHHHHHhc--CCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCC
Confidence 45555555 6888999999964 566788889999988654
No 351
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=21.57 E-value=4.8e+02 Score=24.70 Aligned_cols=33 Identities=21% Similarity=0.108 Sum_probs=25.3
Q ss_pred HHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 166 VEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 166 v~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
+..+.++|+++|+.|.++|. ...+..++..|++
T Consensus 17 ~l~la~~L~~rGh~V~~~t~------~~~~~~v~~~G~~ 49 (401)
T cd03784 17 LVALAWALRAAGHEVRVATP------PEFADLVEAAGLE 49 (401)
T ss_pred HHHHHHHHHHCCCeEEEeeC------HhHHHHHHHcCCc
Confidence 45677889999999999998 2345566677764
No 352
>cd01766 Ufm1 Urm1-like ubiquitin domain. Ufm1 (ubiquitin-fold modifier 1) is a post-translational UBL (ubiquitin-like) modifier with a tertiary structure similar to that of ubiquitin. Ufm1 is initially expressed as a precursor which undergoes C-terminal cleavage to expose a conserved glycine residue that is required for the conjugation reactions involving Ufm1.
Probab=21.50 E-value=1.1e+02 Score=22.59 Aligned_cols=33 Identities=27% Similarity=0.331 Sum_probs=28.5
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCC
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGM 315 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~ 315 (323)
++.++|.+++++..+..|-+...+|.-++.||-
T Consensus 32 lkfaAEeFkv~~~TsAiiTndGvGINP~qtAGn 64 (82)
T cd01766 32 LKFAAEEFKVPAATSAIITNDGIGINPAQTAGN 64 (82)
T ss_pred HHHHHHhcCCCccceeEEecCccccChhhcccc
Confidence 688999999999999888887778888888874
No 353
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=21.39 E-value=80 Score=29.11 Aligned_cols=40 Identities=25% Similarity=0.369 Sum_probs=30.1
Q ss_pred CCCChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCC
Q 020675 160 APLRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGS 203 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl 203 (323)
+.-+|++.++|...-+. +.+++.|. +....+..++..++-
T Consensus 130 V~kRP~vdeFL~~~s~~-~e~v~FTA---s~~~Ya~~v~D~LD~ 169 (262)
T KOG1605|consen 130 VRKRPHVDEFLSRVSKW-YELVLFTA---SLEVYADPLLDILDP 169 (262)
T ss_pred EEcCCCHHHHHHHhHHH-HHHHHHHh---hhHHHHHHHHHHccC
Confidence 34678888888888765 78888888 556777788877765
No 354
>COG0752 GlyQ Glycyl-tRNA synthetase, alpha subunit [Translation, ribosomal structure and biogenesis]
Probab=21.31 E-value=95 Score=28.38 Aligned_cols=47 Identities=17% Similarity=0.091 Sum_probs=34.4
Q ss_pred hcCCCccccCCCCchhHHHHHHHHHHHHHcCCCCC--cEEEEcCCh-hhHHHHHHcCCCE
Q 020675 261 MLKLSVDIDTSSPESLDKIVAALRAGAEYAEKPVR--NCFLIAGSQ-SGVAGAQRIGMPC 317 (323)
Q Consensus 261 ~~KP~p~i~~~~~~~~~~~~~~~~~al~~lgv~p~--~~v~VGDs~-~Di~aA~~aG~~~ 317 (323)
+.||+|+= +.+.|..-++.+|++|. ++=||.|.. +--.+|-..|+.+
T Consensus 84 ilKPsP~N----------iQeLYL~SL~~lGid~~~HDIRFVEDnWE~PTlGawGlGWEV 133 (298)
T COG0752 84 IIKPSPDN----------IQELYLGSLEALGIDPLEHDIRFVEDNWENPTLGAWGLGWEV 133 (298)
T ss_pred EecCCCcc----------HHHHHHHHHHHcCCChhhcceeeeccCCCCCcccccccceeE
Confidence 35888875 22338888999999985 688999985 5566777777654
No 355
>PF01890 CbiG_C: Cobalamin synthesis G C-terminus; InterPro: IPR002750 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. CbiG proteins are specific for anaerobic cobalamin biosynthesis. CbiG, which shows homology with CobE of the aerobic pathway, participates in the conversion of cobalt-precorrin 5 into cobalt-precorrin 6 []. CbiG is responsible for the opening of the delta-lactone ring and extrusion of the C2-unit []. The aerobic pathway uses molecular oxygen to trigger the events at C-20 leading to contraction and expulsion of the C2-unit as acetic acid from a metal-free intermediate, whereas the anaerobic route involves the internal delivery of oxygen from a carboxylic acid terminus to C-20 followed by extrusion of the C2-unit as acetaldehyde, using cobalt complexes as substrates []. This entry represents the core domain of CibG.; GO: 0009236 cobalamin biosynthetic process; PDB: 3BY5_A 2W6K_A 2W6L_A 3EEQ_B.
Probab=21.28 E-value=2.4e+02 Score=22.50 Aligned_cols=47 Identities=19% Similarity=0.237 Sum_probs=32.1
Q ss_pred hhHHHHHHHHHHHHHcCCCCCcEEEEc--CChhh----HHHHHHcCCCEEEEc
Q 020675 275 SLDKIVAALRAGAEYAEKPVRNCFLIA--GSQSG----VAGAQRIGMPCVVMR 321 (323)
Q Consensus 275 ~~~~~~~~~~~al~~lgv~p~~~v~VG--Ds~~D----i~aA~~aG~~~v~v~ 321 (323)
+.+.+.++++.+++..|+.+..+-.|. |-..| ++.|+..|++.+.+.
T Consensus 13 ~~~~i~~ai~~~l~~~~~~~~~i~~iasi~~K~~E~~l~~~A~~l~~~~~~~~ 65 (121)
T PF01890_consen 13 PAEEIEEAIEQALAEAGLSPRSIAAIASIDIKADEPGLLELAEELGIPLRFFS 65 (121)
T ss_dssp -HHHHHHHHHHHHHHCT--GGGEEEEEESSSSS--HHHHHHHHHCTSEEEEE-
T ss_pred CHHHHHHHHHHHHHHcCCChhhccEEEeccccCCCHHHHHHHHHhCCCeEEEC
Confidence 345566678999999999998877665 44333 678899999887764
No 356
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=20.92 E-value=1.3e+02 Score=23.36 Aligned_cols=23 Identities=17% Similarity=0.174 Sum_probs=20.6
Q ss_pred hhHHHHHHHHHHCCCcEEEEcCC
Q 020675 164 PGVEDFVDDAYNEGIPLIVLTAY 186 (323)
Q Consensus 164 pgv~elL~~Lk~~Gi~l~ivTn~ 186 (323)
+.+.++++.++++|.+++++|+.
T Consensus 74 ~~~~~~~~~a~~~g~~iv~iT~~ 96 (139)
T cd05013 74 KETVEAAEIAKERGAKVIAITDS 96 (139)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCC
Confidence 56888999999999999999983
No 357
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=20.67 E-value=1.3e+02 Score=23.66 Aligned_cols=24 Identities=21% Similarity=0.061 Sum_probs=21.5
Q ss_pred ChhHHHHHHHHHHCCCcEEEEcCC
Q 020675 163 RPGVEDFVDDAYNEGIPLIVLTAY 186 (323)
Q Consensus 163 ~pgv~elL~~Lk~~Gi~l~ivTn~ 186 (323)
.+.+.+.++.++++|.+++.+|+.
T Consensus 60 t~~~~~~~~~a~~~g~~vi~iT~~ 83 (120)
T cd05710 60 TKETVAAAKFAKEKGATVIGLTDD 83 (120)
T ss_pred ChHHHHHHHHHHHcCCeEEEEECC
Confidence 468889999999999999999984
No 358
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=20.65 E-value=1.5e+02 Score=22.98 Aligned_cols=25 Identities=20% Similarity=0.317 Sum_probs=21.5
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCC
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAY 186 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~ 186 (323)
-.....+.++.++++|.+++++|+.
T Consensus 65 ~~~~~~~~~~~ak~~g~~vi~iT~~ 89 (131)
T PF01380_consen 65 ETRELIELLRFAKERGAPVILITSN 89 (131)
T ss_dssp TTHHHHHHHHHHHHTTSEEEEEESS
T ss_pred cchhhhhhhHHHHhcCCeEEEEeCC
Confidence 3467888999999999999999984
No 359
>KOG3157 consensus Proline synthetase co-transcribed protein [General function prediction only]
Probab=20.55 E-value=3.5e+02 Score=24.21 Aligned_cols=40 Identities=18% Similarity=0.034 Sum_probs=31.7
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhhHHHHHHcCCCEEEEcC
Q 020675 283 LRAGAEYAEKPVRNCFLIAGSQSGVAGAQRIGMPCVVMRS 322 (323)
Q Consensus 283 ~~~al~~lgv~p~~~v~VGDs~~Di~aA~~aG~~~v~v~~ 322 (323)
-+.+++++|++++++-.==.--.|..-|.+.|-..|.|.+
T Consensus 192 r~~ic~~lg~~~dq~eLSMGMS~DF~~AIe~Gst~VRvGS 231 (244)
T KOG3157|consen 192 RESICKKLGIPADQVELSMGMSADFLLAIEQGSTNVRVGS 231 (244)
T ss_pred HHHHHHHhCCChHHhhhhcccchhHHHHHHhCCceEEecc
Confidence 4567899999988876544445799999999999888765
No 360
>PF11848 DUF3368: Domain of unknown function (DUF3368); InterPro: IPR021799 This domain is functionally uncharacterised. This domain is found in bacteria and archaea. This presumed domain is about 50 amino acids in length.
Probab=20.51 E-value=2e+02 Score=18.93 Aligned_cols=31 Identities=13% Similarity=0.362 Sum_probs=22.1
Q ss_pred CChhHHHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHc
Q 020675 162 LRPGVEDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKL 201 (323)
Q Consensus 162 l~pgv~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~l 201 (323)
+.+.++++++.|++.|+.+ + +...+.+++..
T Consensus 17 lI~~~~~~l~~l~~~g~~i---s------~~l~~~~L~~~ 47 (48)
T PF11848_consen 17 LISEVKPLLDRLQQAGFRI---S------PKLIEEILRRA 47 (48)
T ss_pred ChhhHHHHHHHHHHcCccc---C------HHHHHHHHHHc
Confidence 4558899999999999887 2 35556665544
No 361
>COG2896 MoaA Molybdenum cofactor biosynthesis enzyme [Coenzyme metabolism]
Probab=20.46 E-value=1.8e+02 Score=27.68 Aligned_cols=44 Identities=18% Similarity=0.145 Sum_probs=26.7
Q ss_pred CCCChhHHHHHHHHHHCCCc-EEEEcCCCCCChHHHHHHHHHcCCCc
Q 020675 160 APLRPGVEDFVDDAYNEGIP-LIVLTAYGKSGDRIARSVVEKLGSER 205 (323)
Q Consensus 160 ~~l~pgv~elL~~Lk~~Gi~-l~ivTn~~~~~~~~~~~~l~~lgl~~ 205 (323)
..++.++.++++.+++.++. +.+-||.. .-......++..|++.
T Consensus 70 PllR~dl~eIi~~l~~~~~~~islTTNG~--~L~~~a~~Lk~AGl~r 114 (322)
T COG2896 70 PLLRKDLDEIIARLARLGIRDLSLTTNGV--LLARRAADLKEAGLDR 114 (322)
T ss_pred chhhcCHHHHHHHHhhcccceEEEecchh--hHHHHHHHHHHcCCcE
Confidence 34677888888888877653 55556731 1123334556677765
No 362
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=20.37 E-value=1.2e+02 Score=23.83 Aligned_cols=32 Identities=22% Similarity=0.129 Sum_probs=22.8
Q ss_pred HHHHHHHHHCCCcEEEEcCCCCCChHHHHHHHHHcCCC
Q 020675 167 EDFVDDAYNEGIPLIVLTAYGKSGDRIARSVVEKLGSE 204 (323)
Q Consensus 167 ~elL~~Lk~~Gi~l~ivTn~~~~~~~~~~~~l~~lgl~ 204 (323)
..+-+.|+++|+.|.++|+ ...+..++..|++
T Consensus 16 lala~~L~~rGh~V~~~~~------~~~~~~v~~~Gl~ 47 (139)
T PF03033_consen 16 LALARALRRRGHEVRLATP------PDFRERVEAAGLE 47 (139)
T ss_dssp HHHHHHHHHTT-EEEEEET------GGGHHHHHHTT-E
T ss_pred HHHHHHHhccCCeEEEeec------ccceecccccCce
Confidence 4677899999999999998 2234445888876
No 363
>TIGR02493 PFLA pyruvate formate-lyase 1-activating enzyme. An iron-sulfur protein with a radical-SAM domain (pfam04055). A single glycine residue in EC 2.3.1.54, formate C-acetyltransferase (formate-pyruvate lyase), is oxidized to the corresponding radical by transfer of H from its CH2 to AdoMet with concomitant cleavage of the latter. The reaction requires Fe2+. The first stage is reduction of the AdoMet to give methionine and the 5'-deoxyadenosin-5-yl radical, which then abstracts a hydrogen radical from the glycine residue.
Probab=20.27 E-value=2.3e+02 Score=24.84 Aligned_cols=25 Identities=20% Similarity=0.272 Sum_probs=21.2
Q ss_pred CChh-HHHHHHHHHHCCCcEEEEcCC
Q 020675 162 LRPG-VEDFVDDAYNEGIPLIVLTAY 186 (323)
Q Consensus 162 l~pg-v~elL~~Lk~~Gi~l~ivTn~ 186 (323)
+.|+ +.++++.+++.|+++.+.||+
T Consensus 78 l~~~~~~~li~~~~~~g~~~~i~TNG 103 (235)
T TIGR02493 78 LQPEFLSELFKACKELGIHTCLDTSG 103 (235)
T ss_pred cCHHHHHHHHHHHHHCCCCEEEEcCC
Confidence 5666 458999999999999999994
No 364
>TIGR02494 PFLE_PFLC glycyl-radical enzyme activating protein family. This subset of the radical-SAM family (pfam04055) includes a number of probable activating proteins acting on different enzymes all requiring an amino-acid-centered radical. The closest relatives to this family are the pyruvate-formate lyase activating enzyme (PflA, 1.97.1.4, TIGR02493) and the anaerobic ribonucleotide reductase activating enzyme (TIGR02491). Included within this subfamily are activators of hydroxyphenyl acetate decarboxylase (HdpA, ), benzylsuccinate synthase (BssD, ), gycerol dehydratase (DhaB2, ) as well as enzymes annotated in E. coli as activators of different isozymes of pyruvate-formate lyase (PFLC and PFLE) however, these appear to lack characterization and may activate enzymes with distinctive functions. Most of the sequence-level variability between these forms is concentrated within an N-terminal domain which follows a conserved group of three cysteines and contains a variable pattern of 0
Probab=20.16 E-value=1.9e+02 Score=26.56 Aligned_cols=26 Identities=23% Similarity=0.240 Sum_probs=22.4
Q ss_pred CCChhH-HHHHHHHHHCCCcEEEEcCC
Q 020675 161 PLRPGV-EDFVDDAYNEGIPLIVLTAY 186 (323)
Q Consensus 161 ~l~pgv-~elL~~Lk~~Gi~l~ivTn~ 186 (323)
-+.+.. .++++.+++.|+.+.+.||.
T Consensus 137 ll~~~~l~~l~~~~k~~g~~~~i~TnG 163 (295)
T TIGR02494 137 LLQPEFALALLQACHERGIHTAVETSG 163 (295)
T ss_pred hchHHHHHHHHHHHHHcCCcEeeeCCC
Confidence 367775 69999999999999999995
No 365
>KOG3309 consensus Ferredoxin [Energy production and conversion]
Probab=20.14 E-value=3.4e+02 Score=22.97 Aligned_cols=36 Identities=14% Similarity=0.018 Sum_probs=27.6
Q ss_pred CCceEEEEecCCccccccccchHHHHHHHHHHcCCCC
Q 020675 82 PRDLAVLLEVDGVLVDAYRFGNRQAFNVAFQKLGLDC 118 (323)
Q Consensus 82 ~~~kaViFD~DGTLid~~~~~~~~a~~~~~~~~g~~~ 118 (323)
..++..+.|.||.-++.... .-..+..++.+.|++.
T Consensus 42 e~i~Itfv~~dG~~~~i~g~-vGdtlLd~ah~n~idl 77 (159)
T KOG3309|consen 42 EDIKITFVDPDGEEIKIKGK-VGDTLLDAAHENNLDL 77 (159)
T ss_pred ceEEEEEECCCCCEEEeeee-cchHHHHHHHHcCCCc
Confidence 34788999999999987764 4466777888888864
No 366
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=20.00 E-value=4.8e+02 Score=24.27 Aligned_cols=46 Identities=26% Similarity=0.328 Sum_probs=32.3
Q ss_pred chhHHHHHHHHHHHHHcCCCCCcEEEEcCChhhHHHHHHc--CCCEEEE
Q 020675 274 ESLDKIVAALRAGAEYAEKPVRNCFLIAGSQSGVAGAQRI--GMPCVVM 320 (323)
Q Consensus 274 ~~~~~~~~~~~~al~~lgv~p~~~v~VGDs~~Di~aA~~a--G~~~v~v 320 (323)
-+.+++...+..++++.+++.+.- ++..+.+|-.+.+.. |++++.+
T Consensus 220 i~~~~l~~~l~~~A~~~~Ip~Q~~-~~~~ggTDa~~~~~~~~Gi~t~~i 267 (292)
T PF05343_consen 220 IPNPKLVDKLREIAEENGIPYQRE-VFSGGGTDAGAIQLSGGGIPTAVI 267 (292)
T ss_dssp ESHHHHHHHHHHHHHHTT--EEEE-EESSSSSTHHHHHTSTTSSEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEE-ecCCcccHHHHHHHcCCCCCEEEE
Confidence 345555555788999999988665 677788888888876 7777665
Done!