BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020677
(323 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P48612|PELO_DROME Protein pelota OS=Drosophila melanogaster GN=pelo PE=2 SV=2
Length = 395
Score = 343 bits (880), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 160/319 (50%), Positives = 234/319 (73%), Gaps = 2/319 (0%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MK+L + + + G+V + P +S+D+W AYNLIA GDSV + T+RKV + A+GS + R
Sbjct: 1 MKLLGKYVDKGMQGNVTLVPEESEDMWHAYNLIAKGDSVRSTTIRKVQNETATGSSTSSR 60
Query: 61 VKLKLEIKV--VDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSL 118
V+ L I V +D+D + VLR++G+NI EN++VK+GA+HTL++EL+R F LRK WD++
Sbjct: 61 VRTTLTIAVESIDFDTQACVLRLKGRNIEENQYVKMGAYHTLDLELNRKFELRKPEWDTI 120
Query: 119 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYES 178
AL+ + A DPT SAD+A V+MQEGLAH+ L+ SMT+ RS+IE SIPRK ++ +E
Sbjct: 121 ALERIEMACDPTQSADVAAVVMQEGLAHVCLITASMTLVRSKIEVSIPRKRKGSVQQHEK 180
Query: 179 ALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRI 238
L KF+E V+Q+ L+HV+F+VV+C +IASPGF +DQF+ ++ +A + + +++NKS+
Sbjct: 181 GLAKFYEQVMQSILRHVNFDVVKCVLIASPGFVRDQFYDYMFQQAVKMDYKLLLDNKSKF 240
Query: 239 ILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVE 298
+LVH SSG+KHSLRE+L P V+ + DTKAA EV+AL+ F+ ML +P +A YG KHV
Sbjct: 241 MLVHASSGFKHSLREILQDPAVLAKMSDTKAAGEVKALEQFYMMLQCEPAKAFYGKKHVL 300
Query: 299 VAHERMAVQTLLITDDLFR 317
A E A++TLLI+D+LFR
Sbjct: 301 QAAESQAIETLLISDNLFR 319
>sp|Q9BRX2|PELO_HUMAN Protein pelota homolog OS=Homo sapiens GN=PELO PE=1 SV=2
Length = 385
Score = 320 bits (821), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 150/319 (47%), Positives = 227/319 (71%), Gaps = 2/319 (0%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MK++R+N+ ++ G V + P + +D+W YNL+ GDS+ A T+RKV + ++GS + R
Sbjct: 1 MKLVRKNIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VK--LKLEIKVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSL 118
V+ L L ++ +D+D + LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+
Sbjct: 61 VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120
Query: 119 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYES 178
L+ + QA DP SAD+A V+MQEGLAHI LV SMT+TR+++E +IPRK + ++
Sbjct: 121 VLERIEQACDPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDR 180
Query: 179 ALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRI 238
AL +F+E V+QA +H+ F+VV+C ++ASPGF ++QF +L +A + + ++EN+S+
Sbjct: 181 ALERFYEQVVQAIQRHIHFDVVKCILVASPGFVREQFCDYLFQQAVKTDNKLLLENRSKF 240
Query: 239 ILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVE 298
+ VH SSG+K+SL+E L P V + + DTKAA EV+AL DF+ ML ++P RA YG K VE
Sbjct: 241 LQVHASSGHKYSLKEALCDPTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVE 300
Query: 299 VAHERMAVQTLLITDDLFR 317
A+E MA+ TLLI+D+LFR
Sbjct: 301 KANEAMAIDTLLISDELFR 319
>sp|Q5RCE3|PELO_PONAB Protein pelota homolog OS=Pongo abelii GN=PELO PE=2 SV=1
Length = 385
Score = 320 bits (820), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 150/319 (47%), Positives = 227/319 (71%), Gaps = 2/319 (0%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MK++R+N+ ++ G V + P + +D+W YNL+ GDS+ A T+RKV + ++GS + R
Sbjct: 1 MKLVRKNIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VK--LKLEIKVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSL 118
V+ L L ++ +D+D + LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+
Sbjct: 61 VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120
Query: 119 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYES 178
L+ + QA DP SAD+A V+MQEGLAHI LV SMT+TR+++E +IPRK + ++
Sbjct: 121 VLERIEQACDPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDR 180
Query: 179 ALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRI 238
AL +F+E V+QA +H+ F+VV+C ++ASPGF ++QF ++ +A + + ++EN+S+
Sbjct: 181 ALERFYEQVVQAIQRHIHFDVVKCILVASPGFVREQFCDYMFQQAVKTDNKLLLENRSKF 240
Query: 239 ILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVE 298
+ VH SSG+K+SL+EVL P V + + DTKAA EV+AL DF+ ML + P RA YG K VE
Sbjct: 241 LQVHASSGHKYSLKEVLCDPTVASRLSDTKAAGEVKALDDFYKMLQHGPDRAFYGLKQVE 300
Query: 299 VAHERMAVQTLLITDDLFR 317
A+E MA+ TLLI+D+LFR
Sbjct: 301 KANEAMAIDTLLISDELFR 319
>sp|Q58DV0|PELO_BOVIN Protein pelota homolog OS=Bos taurus GN=PELO PE=2 SV=2
Length = 385
Score = 318 bits (816), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 148/319 (46%), Positives = 227/319 (71%), Gaps = 2/319 (0%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MK++R+++ ++ G V + P + +D+W YNL+ GDS+ A T+RKV + ++GS + R
Sbjct: 1 MKLVRKDIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VK--LKLEIKVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSL 118
V+ L L ++ +D+D + LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+
Sbjct: 61 VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120
Query: 119 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYES 178
L+ + QA DP SAD+A V+MQEGLAHI LV SMT+TR+++E +IPRK + ++
Sbjct: 121 VLERIEQACDPAWSADVAAVVMQEGLAHICLVTPSMTLTRAKVEVNIPRKRKGNCSQHDR 180
Query: 179 ALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRI 238
AL +F+E V+QA +H+ F+VV+C ++ASPGF ++QF ++ +A + + ++EN+S+
Sbjct: 181 ALERFYEQVVQAIQRHIHFDVVKCVLVASPGFVREQFCDYMFQQAVKTDNKVLLENRSKF 240
Query: 239 ILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVE 298
+ VH SSG+K+SL+E L P V + + DTKAA EV+AL DF+ ML ++P RA YG K VE
Sbjct: 241 LQVHASSGHKYSLKEALCDPTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVE 300
Query: 299 VAHERMAVQTLLITDDLFR 317
A+E MA+ TLLI+D+LFR
Sbjct: 301 KANEAMAIDTLLISDELFR 319
>sp|Q5U567|PELO_XENLA Protein pelota homolog OS=Xenopus laevis GN=pelo PE=2 SV=1
Length = 383
Score = 318 bits (815), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 153/319 (47%), Positives = 225/319 (70%), Gaps = 2/319 (0%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MK++R+++ ++ G V + P +++D+W YNL+ GDS+ A T+RKV + ++GS + R
Sbjct: 1 MKLIRKDIEKDNAGQVTLIPEEAEDMWHTYNLLHVGDSLQASTIRKVQTESSTGSVGSNR 60
Query: 61 VKLKLEIKV--VDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSL 118
V+ L I V +D+D + LR++G NI EN++VK+GA+HT+E+E +R F L K WDS+
Sbjct: 61 VRTTLTICVETIDFDSQACQLRVKGINIQENQYVKMGAYHTIELEPNRKFTLAKKQWDSI 120
Query: 119 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYES 178
L+ + QA DP SAD+A V+MQEGLAHI LV SMT+ R++IETSIPRK +E
Sbjct: 121 VLERIEQACDPAFSADVAAVVMQEGLAHICLVTPSMTLLRAKIETSIPRKRRGNCTQHEK 180
Query: 179 ALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRI 238
AL KF+E V+Q L+H++F+VV+ ++ASPGF ++QF L L A ++ L+ ++EN+ +
Sbjct: 181 ALEKFYEQVMQGILRHINFDVVKVVLVASPGFVREQFCEFLFLRAVKQDLKILLENRGKF 240
Query: 239 ILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVE 298
+ VH+SSG K+SL EVL P V + DTKAA E++AL DF+ ML ++P RA YG K VE
Sbjct: 241 LQVHSSSGRKYSLTEVLCDPAVTARLSDTKAACEIKALGDFYKMLQHEPDRAFYGIKQVE 300
Query: 299 VAHERMAVQTLLITDDLFR 317
A+E +AV TLL+TD+LFR
Sbjct: 301 KANEALAVDTLLVTDELFR 319
>sp|Q7ZWC4|PELO_DANRE Protein pelota homolog OS=Danio rerio GN=pelo PE=2 SV=1
Length = 385
Score = 318 bits (815), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 147/319 (46%), Positives = 228/319 (71%), Gaps = 2/319 (0%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MK++ +++ ++ G V + P +++D+W YNL+ GDS+ A T+RKV + ++GS + R
Sbjct: 1 MKLVHKDIEKDNAGQVTLIPDEAEDMWHTYNLLQVGDSLRASTIRKVQTESSTGSVGSSR 60
Query: 61 VK--LKLEIKVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSL 118
V+ L L ++ +D+D + LR++G NI EN++VK+GA+HT+E+EL+R F L K +WDS+
Sbjct: 61 VRTTLTLCVETIDFDSQACQLRVKGTNIQENQYVKMGAYHTIELELNRKFTLAKKVWDSV 120
Query: 119 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYES 178
LD + QA DP AD+A V+MQEGLA+++LV +MT+ R+++E +IPRK + ++
Sbjct: 121 VLDRIEQACDPAQKADVAAVVMQEGLANLVLVTPAMTLLRAKVEVTIPRKRKGSCTQHDK 180
Query: 179 ALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRI 238
AL +F+E V+Q L+H +F+VV+C ++ASPGF KDQF +L EA R+ + ++EN+S+
Sbjct: 181 ALERFYEAVMQGILRHFNFDVVKCILVASPGFVKDQFISYLFKEAVRQDCKLLLENRSKF 240
Query: 239 ILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVE 298
++VH+SSG+K+SL+EVL P V + DTKAA EV+AL+DF+ ML +P RA YG HVE
Sbjct: 241 MVVHSSSGHKYSLKEVLCDPAVTARLSDTKAAGEVKALEDFYKMLQQEPDRAFYGLAHVE 300
Query: 299 VAHERMAVQTLLITDDLFR 317
A E +A+ LLI+D LFR
Sbjct: 301 RASEALAIDILLISDTLFR 319
>sp|Q5XIP1|PELO_RAT Protein pelota homolog OS=Rattus norvegicus GN=Pelo PE=2 SV=1
Length = 385
Score = 318 bits (814), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 147/319 (46%), Positives = 228/319 (71%), Gaps = 2/319 (0%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MK++R+++ ++ G V + P + +D+W YNL+ GDS+ A T+RKV + ++GS + R
Sbjct: 1 MKLVRKDIEKDNAGQVTLVPEEPEDMWHTYNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VK--LKLEIKVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSL 118
V+ L L ++ +D+D + LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+
Sbjct: 61 VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120
Query: 119 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYES 178
L+ + QA DP SAD+A V+MQEGLAH+ LV SMT+TR+++E +IPRK + ++
Sbjct: 121 VLERIEQACDPAWSADVAAVVMQEGLAHVCLVTPSMTLTRAKVEVNIPRKRKGNCSQHDR 180
Query: 179 ALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRI 238
AL +F+E V+QA +H++F VV+C ++ASPGF ++QF ++ +A + + ++EN+S+
Sbjct: 181 ALERFYEQVVQAIQRHINFEVVKCILVASPGFVREQFCDYMFQQAVKTDNKVLLENRSKF 240
Query: 239 ILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVE 298
+ VH SSG+K+SL+EVL P V + + DTKAA EV+AL DF+ ML ++P RA YG K VE
Sbjct: 241 LQVHASSGHKYSLKEVLCDPTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVE 300
Query: 299 VAHERMAVQTLLITDDLFR 317
A+E +A+ TLLI+D+LFR
Sbjct: 301 RANEALAIDTLLISDELFR 319
>sp|Q5ZK01|PELO_CHICK Protein pelota homolog OS=Gallus gallus GN=PELO PE=2 SV=1
Length = 385
Score = 317 bits (811), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 146/319 (45%), Positives = 228/319 (71%), Gaps = 2/319 (0%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MK++R++L ++ G V + P + +D+W YNL+ GDS+ A T+RKV + ++GS + R
Sbjct: 1 MKLVRKDLEKDNAGQVTLIPEEPEDMWHTYNLLQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VK--LKLEIKVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSL 118
++ L L ++ +D+D + LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+
Sbjct: 61 IRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120
Query: 119 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYES 178
L+ + QA DP +AD+A V+MQEGLAH+ LV SMT+TR+++E +IPRK + ++
Sbjct: 121 VLERIEQACDPAWNADVAAVVMQEGLAHVCLVTPSMTLTRAKVEVNIPRKRKGNCSQHDR 180
Query: 179 ALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRI 238
AL +F+E V+QA +H++F VV+C ++ASPGF ++QF ++ +A + + ++EN+S+
Sbjct: 181 ALERFYEQVVQAIQRHINFEVVKCVLVASPGFVREQFCDYMFQQAVKTDNKLLLENRSKF 240
Query: 239 ILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVE 298
+ VH+SSG+K+ L+E L P V + + DTKAA EV+AL DF+ ML ++P RA YG KHVE
Sbjct: 241 LQVHSSSGHKYVLKEALCDPAVTSRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKHVE 300
Query: 299 VAHERMAVQTLLITDDLFR 317
A+E MA+ TLLI+D+LFR
Sbjct: 301 KANEAMAIDTLLISDELFR 319
>sp|Q80X73|PELO_MOUSE Protein pelota homolog OS=Mus musculus GN=Pelo PE=2 SV=3
Length = 385
Score = 315 bits (806), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 145/319 (45%), Positives = 227/319 (71%), Gaps = 2/319 (0%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MK++R+++ ++ G V + P + +D+W +NL+ GDS+ A T+RKV + ++GS + R
Sbjct: 1 MKLVRKDIEKDNAGQVTLVPEEPEDMWHTFNLVQVGDSLRASTIRKVQTESSTGSVGSNR 60
Query: 61 VK--LKLEIKVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSL 118
V+ L L ++ +D+D + LR++G NI ENE+VK+GA+HT+E+E +R F L K WDS+
Sbjct: 61 VRTTLTLCVEAIDFDSQACQLRVKGTNIQENEYVKMGAYHTIELEPNRQFTLAKKQWDSV 120
Query: 119 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYES 178
L+ + QA DP SAD+A V+MQEGLAH+ LV SMT+TR+++E +IPRK + ++
Sbjct: 121 VLERIEQACDPAWSADVAAVVMQEGLAHVCLVTPSMTLTRAKVEVNIPRKRKGNCSQHDR 180
Query: 179 ALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRI 238
AL +F+E V+QA +H++F VV+C ++ASPGF ++QF ++ +A + + ++EN+S+
Sbjct: 181 ALERFYEQVVQAIQRHINFEVVKCVLVASPGFVREQFCDYMFQQAVKTDNKVLLENRSKF 240
Query: 239 ILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVE 298
+ VH SSG+K+SL+E L P V + + DTKAA EV+AL DF+ ML ++P RA YG K VE
Sbjct: 241 LQVHASSGHKYSLKEALCDPTVASRLSDTKAAGEVKALDDFYKMLQHEPDRAFYGLKQVE 300
Query: 299 VAHERMAVQTLLITDDLFR 317
A+E +A+ TLLI+D+LFR
Sbjct: 301 RANEALAIDTLLISDELFR 319
>sp|P50444|YNU6_CAEEL Uncharacterized protein R74.6 OS=Caenorhabditis elegans GN=R74.6
PE=3 SV=1
Length = 381
Score = 258 bits (660), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 131/319 (41%), Positives = 212/319 (66%), Gaps = 2/319 (0%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MK +R + +G G V + +++D+W YNLI GD + A T+RKV+ + ++G+ ++R
Sbjct: 1 MKQFKRGIERDGTGFVVLMAEEAEDMWHIYNLIRIGDIIKASTIRKVVSETSTGTTSSQR 60
Query: 61 VKLKLEIKV--VDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSL 118
V L + V +D+D L ++G+NI EN+ VK+GA+HT+++E +R F L+K WDS+
Sbjct: 61 VHTMLTVSVESIDFDPGAQELHLKGRNIEENDIVKLGAYHTIDLEPNRKFTLQKTEWDSI 120
Query: 119 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYES 178
L+ L+ A DP +AD+A V++ EGLA++ L+ +MT+TR++I+ +IPRK + +E
Sbjct: 121 DLERLNLALDPAQAADVAAVVLHEGLANVCLITPAMTLTRAKIDMTIPRKRKGFTSQHEK 180
Query: 179 ALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRI 238
L KF+E V AF++HV+ VV+C ++AS GF KD F +HL+ A+ + E +++
Sbjct: 181 GLEKFYEAVSTAFMRHVNLQVVKCVIVASRGFVKDAFMQHLIAHADANGKKFTTEQRAKF 240
Query: 239 ILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVE 298
+L H+SSG+KH+L+EVL+ P V + DTKA EV+AL F +++ +P RA YG HV
Sbjct: 241 MLTHSSSGFKHALKEVLETPQVALRLADTKAQGEVKALNQFLELMSTEPDRAFYGFNHVN 300
Query: 299 VAHERMAVQTLLITDDLFR 317
A++ +A++TLL+ D LFR
Sbjct: 301 RANQELAIETLLVADSLFR 319
>sp|Q9USL5|DOM34_SCHPO Protein dom34 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=dom34 PE=1 SV=1
Length = 390
Score = 256 bits (655), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 122/319 (38%), Positives = 205/319 (64%), Gaps = 2/319 (0%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MK++++N+ +NG G + M P + +D+W YN++ GD + A TVR+V++ A+GS R
Sbjct: 1 MKLIQKNIEKNGSGWITMCPEEPEDMWHLYNILQVGDQLKASTVRRVVKVGATGSTSGSR 60
Query: 61 VKLKLEIKV--VDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSL 118
V +KL I V +D+D + + L I+G+ + VK+G++HTL++ELHR F L K+ WD+
Sbjct: 61 VVMKLRILVENMDFDTKAAQLHIKGRTTEYHPEVKMGSYHTLDLELHRNFTLYKNEWDAF 120
Query: 119 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYES 178
ALD + A +P+ +A++ V++ EGLA+I L+ MTI R RI+ IPRK + Y+
Sbjct: 121 ALDRVDAACNPSRNAEIGAVVLDEGLANICLITDYMTILRQRIDQVIPRKRRGDSSAYQK 180
Query: 179 ALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRI 238
L+KF+++V Q+ DF+ ++ ++ASPGF + ++ A + L+ I+++K++
Sbjct: 181 GLDKFYDSVFQSINSEFDFDKLKVVILASPGFVARGLYDYIFSMAVKLDLKQIVKSKNKF 240
Query: 239 ILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVE 298
+++H+S+G+ HSL E+L P V + + DTK QE++ L F++++ D +A YGP HV
Sbjct: 241 VILHSSTGHIHSLNEILKDPAVESKLADTKYVQEIRVLNKFYDVMNEDDRKAWYGPNHVL 300
Query: 299 VAHERMAVQTLLITDDLFR 317
A E A+ LLI+D LFR
Sbjct: 301 KAFELGAIGELLISDSLFR 319
>sp|P33309|DOM34_YEAST Protein DOM34 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=DOM34 PE=1 SV=2
Length = 386
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 160/318 (50%), Gaps = 10/318 (3%)
Query: 4 LRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQM--ASGSRDAERV 61
L+++ G + + P D +DL+ Y ++ D + + +K ++ A + + V
Sbjct: 6 LKKDSFNKGGAVITLLPEDKEDLFTVYQIVDKDDEL--IFKKKFTSKLDEAGKKKSTDLV 63
Query: 62 KLKLEIKVVDYDKEGSVLRIRGKNILE-----NEHVKIGAFHTLEIELHRAFVLRKDLWD 116
KLK+++ D+D + L+ +G + + N + +G + + ++ F + K ++
Sbjct: 64 KLKIKVISEDFDMKDEYLKYKGVTVTDESGASNVDIPVGKYLSFTLDYVYPFTIIKQNFN 123
Query: 117 SLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPA-IAG 175
L++A + +D A V++QEG+AH+ LV S TI + +IE S+P+K +
Sbjct: 124 KFMQKLLNEACNIEYKSDTAAVVLQEGIAHVCLVTSSSTILKQKIEYSMPKKKRTTDVLK 183
Query: 176 YESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENK 235
++ KF++ + A K ++F+ ++ ++ SPGF + AE + I++NK
Sbjct: 184 FDEKTEKFYKAIYSAMKKDLNFDKLKTIILCSPGFYAKILMDKIFQYAEEEHNKKILDNK 243
Query: 236 SRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPK 295
+ H S+GY + EVL P + ++DTK ++E+ + +F L D +A YG K
Sbjct: 244 GMFFIAHCSTGYLQGINEVLKNPLYASKLQDTKYSKEIMVMDEFLLHLNKDDDKAWYGEK 303
Query: 296 HVEVAHERMAVQTLLITD 313
V A E A+ LL+TD
Sbjct: 304 EVVKAAEYGAISYLLLTD 321
>sp|A3DMX7|PELO_STAMF Protein pelota homolog OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=pelA PE=3 SV=1
Length = 356
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 150/320 (46%), Gaps = 22/320 (6%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MKIL ++L + G +K+ P D DDLW YN+I P D V A T R + S SR
Sbjct: 1 MKILEKDLRK---GYLKILPEDQDDLWALYNIIKPLDRVTATTSRDIKHGETSSSRRIP- 56
Query: 61 VKLKLEIKVVDYDKEGSVLRIRGKNILENEHVKI-GAFHTLEIELHRAFVLRKDLWDSLA 119
+ L +E+K +++ LRIRG + E + G +HTL IE + ++ K+ W
Sbjct: 57 MTLTIEVKTLEFQPFTERLRIRGIVVEGPERYGVKGHYHTLNIEPGKPLIIWKEKWSENE 116
Query: 120 LDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESA 179
L+ + + LA E A I L+ ++IP K P + ++
Sbjct: 117 LEIISRFTSRKQKVLLATFDYDE--AAIALLTEQGIRLLEEFTSNIPGKREPVL--FQKG 172
Query: 180 LNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRII 239
L K+ ++ + L +++ V VIASPG + ++R R I E K I
Sbjct: 173 LEKYLSSIAEKILDYINKFQVDIVVIASPG------------DLQKRVARIIKEKKPVNI 220
Query: 240 LVHTSS-GYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVE 298
+ T S G + +RE+L +V +K+T + + L +F L+ +P YG VE
Sbjct: 221 ITDTVSIGGQSGIRELLRRDSVREAVKETNIIKAQRILDEFHKNLSKNPDMVAYGIDDVE 280
Query: 299 VAHERMAVQTLLITDDLFRL 318
A + AV LL++++L R+
Sbjct: 281 YAVKYNAVDKLLVSEELLRI 300
>sp|C5A5T8|PELO_THEGJ Protein pelota homolog OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=pelA PE=3 SV=1
Length = 357
Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 160/321 (49%), Gaps = 24/321 (7%)
Query: 7 NLVENGP--GSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVK-- 62
++E P G VK++ DDLW Y++I PGD V A T+RK + S S AE+V+
Sbjct: 2 QILEEKPKEGIVKVKAETLDDLWHLYHVIDPGDVVYAKTLRK--QAQRSDSLRAEKVEVI 59
Query: 63 ---LKLEIKVVDYDKEGSVLRIRGKNILEN-EHVKIGAFHTLEIELHRAFVLRKDLWDSL 118
L ++ + +++ K + +R+ G + + + V +G +HT+ IE ++K W
Sbjct: 60 PVYLGVKAEKINFHKFANQVRVTGPIVYASRDDVPLGKYHTITIEEGTVVTIQKPRWKEH 119
Query: 119 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAI--AGY 176
++ L +A + + A + +V++ EG A I LV R + + SI R G
Sbjct: 120 HIERLKEAIEASKRAKVMIVVIDEGEADIALV-REYGV---EMVASIRRNLGGKRYNTDR 175
Query: 177 ESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKS 236
ES +FF ++ + + ++ + A++A PGF K+ FH+ L R+ P E
Sbjct: 176 ESEEKRFFHDLAKTMAELMEREKIEKAIVAGPGFVKEDFHKFL------RENYP--ELAK 227
Query: 237 RIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKH 296
++++ TS + + EV+ V + + + A+EVQ ++ + + A YG +
Sbjct: 228 KVVIEDTSVTGRTGIYEVIKRGTVDRVYHENRVAKEVQLVEKVLEHVARNTGLATYGLRE 287
Query: 297 VEVAHERMAVQTLLITDDLFR 317
VE A AV+TLL+ D+L +
Sbjct: 288 VEEAVNYGAVETLLVLDELLK 308
>sp|O59148|PELO_PYRHO Protein pelota homolog OS=Pyrococcus horikoshii (strain ATCC 700860
/ DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=pelA
PE=3 SV=1
Length = 356
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 157/324 (48%), Gaps = 31/324 (9%)
Query: 7 NLVENGP--GSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVK-- 62
++E P G VK++ DDLW Y++I PGD V A T+RK + S S E+V+
Sbjct: 2 EILEEKPKEGKVKIKVETLDDLWHLYHIITPGDVVYAKTLRK--QSQRSDSLRPEKVEVI 59
Query: 63 ---LKLEIKVVDYDKEGSVLRIRGKNILEN-EHVKIGAFHTLEIELHRAFVLRKDLWDSL 118
L ++++ +++ K + LR+ G I + E V +G +HT+ +E L+K+ W
Sbjct: 60 PVFLGVKVEKINFHKFANQLRVTGPIIYASREDVPLGKYHTIAVEPGTIITLQKERWKPY 119
Query: 119 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSR-IETSIPRKHGPAIAGY- 176
++ L +A + + A + +V +++G A M I R ++ +H Y
Sbjct: 120 YIERLKEAVEASKRAKVMIVTIEDGEAE-------MAIVREYGLDFIATIRHNLGGKRYN 172
Query: 177 ---ESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIE 233
E KFF +V + + ++ A++A PGF K+ F++ L ++ P +
Sbjct: 173 IKREDEERKFFHDVAKTMKDVMSRENIQRAIVAGPGFYKEDFYKFL------KENYPDL- 225
Query: 234 NKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYG 293
S+I+L TS G + + EV+ V + +++ A E++ ++ + D YG
Sbjct: 226 -ASKIVLDDTSMGGRVGIYEVIKRGTVDKVYSESRIANEIKLVEKVIERIAKDEP-VAYG 283
Query: 294 PKHVEVAHERMAVQTLLITDDLFR 317
K VE A AV+ LL+ D+L +
Sbjct: 284 MKEVEEAVNYGAVEILLVLDELLK 307
>sp|Q5V3G6|PELO_HALMA Protein pelota homolog OS=Haloarcula marismortui (strain ATCC 43049
/ DSM 3752 / JCM 8966 / VKM B-1809) GN=pelA PE=3 SV=1
Length = 355
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 150/321 (46%), Gaps = 23/321 (7%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLR---QMASGSRD 57
M+I + G +++ P DDLW +I PGD V T R++ R + +
Sbjct: 1 MQIQSQETTAEGAERIEVVPETLDDLWHLSYVIEPGDLVSGDTTRRIQRNDDNLRDKGGE 60
Query: 58 AERVKLKLEIKVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDS 117
E + +++E+ V++ K + LR+ G+ + + ++G HTL +E H + K L
Sbjct: 61 REPMWIQIEVTDVEFAKFANRLRVGGEIVDCSREDQLGFHHTLNVEEHTELTVEKHLKPD 120
Query: 118 LALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYE 177
A D L +A + T + D+A+ ++EG AH+ V + T R+ I ++ + Y
Sbjct: 121 QA-DRLEEAVEATENPDVAIATVEEGEAHVHTVAQYGTEERATITSTTGKGE------YA 173
Query: 178 SALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 237
+ F+ L + LK D V ++A PGFTK H E I + +
Sbjct: 174 RPRKELFDE-LASVLKRQD---VDAYILAGPGFTKQDALDHFQDE--------IPDIAEQ 221
Query: 238 IILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHV 297
I +V TS+ + EVL V ++ + T+ A+E + + + + + YGP+ V
Sbjct: 222 ITVVDTSAVGDRGVHEVLKRGAVEDVQQQTRIAEEADYIDELMARIGS-GSEVAYGPEEV 280
Query: 298 EVAHERMAVQTLLITDDLFRL 318
A + A++TLL+ D+ RL
Sbjct: 281 AKAADYGAIETLLVLDERLRL 301
>sp|Q9V0V3|PELO_PYRAB Protein pelota homolog OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=pelA PE=3 SV=1
Length = 356
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 151/310 (48%), Gaps = 19/310 (6%)
Query: 14 GSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVK-----LKLEIK 68
G VK++ DDLW Y++I+PGD V A T+RK + S S E+V+ L + +
Sbjct: 11 GKVKLKVETLDDLWHLYHVISPGDIVYAKTLRK--QAQRSDSLRPEKVEAIPVFLGVRAE 68
Query: 69 VVDYDKEGSVLRIRGKNILEN-EHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAA 127
++ + + LR+ G + + + V +G +HT+ +E ++K+ W S ++ + +A
Sbjct: 69 KINLHRFANQLRVTGPIVYASRDDVPLGKYHTIAVEPGMTITIQKERWRSHHVERIKEAV 128
Query: 128 DPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENV 187
+ + A + +V M++G A + +V + I +I K E KFF +V
Sbjct: 129 EASKRAKVMIVAMEDGEAEVAIVREYGLDFIASIRHNIGGKRYN--VKREDEEKKFFHDV 186
Query: 188 LQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGY 247
+ ++ V+ ++A PGF K+ F+ L R+ P E +++L TS G
Sbjct: 187 AKTIKDLIERENVQKVIVAGPGFYKENFYGFL------RENYP--ELAGKVVLDDTSMGG 238
Query: 248 KHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQ 307
+ + EV+ V + +T+ AQE++ ++ + D YG K VE A AV
Sbjct: 239 RVGVYEVIKRGTVDKVYTETRVAQEIKLVEKVIERIAKDEP-VAYGLKDVEEAVNYGAVD 297
Query: 308 TLLITDDLFR 317
TLL+ D+L +
Sbjct: 298 TLLVLDELLK 307
>sp|Q5JIB9|PELO_PYRKO Protein pelota homolog OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=pelA PE=3 SV=1
Length = 357
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 159/323 (49%), Gaps = 28/323 (8%)
Query: 7 NLVENGP--GSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVK-- 62
++E P G VK++ DDLW Y++I PGD V A T+RK + + S AE+V+
Sbjct: 2 QILEEKPKEGKVKVKAETLDDLWHLYHIIDPGDIVYAKTLRK--QAQRADSLRAEKVEVI 59
Query: 63 ---LKLEIKVVDYDKEGSVLRIRGKNILEN-EHVKIGAFHTLEIELHRAFVLRKDLWDSL 118
L ++ + +++ K + +R+ G + + E V +G +HT+ IE ++K W
Sbjct: 60 PVFLGVQAEKINFHKFANQVRVTGPIVYASREDVPLGKYHTIAIEQGTVVTIQKPRWKEH 119
Query: 119 ALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGY-- 176
++ L +A + A + +V++ +G A + LV R + I SI +H Y
Sbjct: 120 HIERLKEAVAASKRARVMIVVIDDGEADMALV-REYGV---EILNSI--RHNLGGKRYNT 173
Query: 177 --ESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIEN 234
ES KFF +V + + + V A++A PGF K+ F++ L ++ P E
Sbjct: 174 DRESEEMKFFHDVAKTMEEVMKRENVEKAIVAGPGFVKEDFYKFL------KEKYP--EL 225
Query: 235 KSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGP 294
++++ TS + + EV+ V + ++ + A+EVQ ++ + + YG
Sbjct: 226 AKKVVIEDTSVTGRTGIYEVIKRGVVDRVYQENRVAKEVQLVEKVLENIARNNGLVAYGL 285
Query: 295 KHVEVAHERMAVQTLLITDDLFR 317
K VE A AV+TLL+ D+L +
Sbjct: 286 KEVEEAVNYGAVETLLVLDELLK 308
>sp|B6YUV3|PELO_THEON Protein pelota homolog OS=Thermococcus onnurineus (strain NA1)
GN=pelA PE=3 SV=1
Length = 357
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 154/314 (49%), Gaps = 26/314 (8%)
Query: 14 GSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVK-----LKLEIK 68
G VK++ DDLW Y++I GD V A T+RK + S S AE+V+ L + +
Sbjct: 11 GKVKVKAETLDDLWHLYHIIDEGDVVYAKTLRK--QSQRSDSLRAEKVEVIPVFLGVRAE 68
Query: 69 VVDYDKEGSVLRIRGKNILEN-EHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAA 127
+++ K + +R+ G + + E V +G +HT+ IE ++K W ++ L +A
Sbjct: 69 KINFHKFANQVRVTGPIVYASREDVPLGKYHTIAIEEGTVVTIQKPRWKEHHIERLREAV 128
Query: 128 DPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGY----ESALNKF 183
+ A + +V++ +G A + LV R + I TSI +H Y E+ +F
Sbjct: 129 SASKRARVMIVVIDDGEADMALV-REYGV---EILTSI--RHNLGGKRYNTDREAEEKRF 182
Query: 184 FENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHT 243
F +V + + ++ V A++A PGF K+ F++ L R+ P E ++++ T
Sbjct: 183 FHDVAKTMEEIMNREKVEKAIVAGPGFVKEDFYKFL------RENYP--ELVKKVVIEDT 234
Query: 244 SSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHER 303
S + + EV+ V + + + A+EVQ ++ + + YG + VE A
Sbjct: 235 SVTGRTGIYEVIKRGTVDRVYHENRVAKEVQLIEKVLENIAKNNGLVAYGLREVEEAANY 294
Query: 304 MAVQTLLITDDLFR 317
AV+TLL+ D+L +
Sbjct: 295 GAVETLLVLDELLK 308
>sp|Q0W6H4|PELO_UNCMA Protein pelota homolog OS=Uncultured methanogenic archaeon RC-I
GN=pelA PE=3 SV=1
Length = 357
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 150/313 (47%), Gaps = 19/313 (6%)
Query: 14 GSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVR---KVLRQMASGSRDAERVKLKLEIKVV 70
G + ++P DDLW ++ PGD+V A+T R V ++ + + V+L ++++
Sbjct: 13 GEISLQPESLDDLWHLKYIVEPGDTVFAMTFRAVDSVSDKIRPDKVEKKLVRLGIKVEST 72
Query: 71 DYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPT 130
++ K + LRI+G I + + GA+HTL IE + + K W S ++ + A + +
Sbjct: 73 EFHKFSNRLRIKGTIISD---LDAGAYHTLNIEPYSELSIAKH-WKSDQIERIRDAVEAS 128
Query: 131 ASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQA 190
++ +V ++EG A I + + SRI + K A A +FF V A
Sbjct: 129 KRPEVEIVTIEEGEAAIGYLRQYGIEEVSRIRQASSGKREGADARSVDGRGEFFGEVA-A 187
Query: 191 FLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHS 250
LK+ D V+ V+A PGF KD F + L R P + K +I+ TSS
Sbjct: 188 QLKYAD--KVQTIVVAGPGFIKDDFVKFL------RVNHPAVAQK--VIVEDTSSIGSSG 237
Query: 251 LREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLL 310
+EVL + + ++ + +E Q ++ + + D +A YG + A + AV+TLL
Sbjct: 238 FQEVLRRGAIQRVAEENRITREAQLIEALLSEIAKD-GKATYGFAETKRAVDYGAVETLL 296
Query: 311 ITDDLFRLVCSKS 323
I D+ R + K
Sbjct: 297 IADETLRGLREKG 309
>sp|Q3INN9|PELO_NATPD Protein pelota homolog OS=Natronomonas pharaonis (strain DSM 2160 /
ATCC 35678) GN=pelA PE=3 SV=1
Length = 355
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 148/320 (46%), Gaps = 23/320 (7%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLR---QMASGSRD 57
M+I+ R E + + P DDLW ++ PGD V T R++ R +M +
Sbjct: 1 MRIVDRESAEGRRERITLVPETLDDLWHLTYVLEPGDLVAGDTTRRIQRDDDKMRDTGGE 60
Query: 58 AERVKLKLEIKVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDS 117
E + +++++ V++ K + LR+ G + + ++G HT +E H + K +W
Sbjct: 61 REPMWIRIDVNNVEFAKFANRLRVGGDIVDCSREDQLGFHHTFNVEEHDELTVEK-VWQV 119
Query: 118 LALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYE 177
L+ L +A + D+A+ ++EG AHI V + R+ I + + Y
Sbjct: 120 DQLERLEEAVEAAEQPDVAIATVEEGQAHIHTVAQYGVEERASITGTTGKGE------YA 173
Query: 178 SALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 237
+ ++ FE L A L+ +D + ++A PGFTK H+ A P E +
Sbjct: 174 RSRDELFEE-LAAILRRLDAEAI---ILAGPGFTKQDALEHIEDNA------P--EAAEK 221
Query: 238 IILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHV 297
I +V T+S + EVL V + +T+ ++E + + + + + +A YG V
Sbjct: 222 IQVVDTASVGDRGVHEVLKRGAVDRIQTETRVSKEAELIDELMERI-GEGEKAAYGVDEV 280
Query: 298 EVAHERMAVQTLLITDDLFR 317
A E A++TLLI D+ R
Sbjct: 281 AEAAEFGAIETLLILDERLR 300
>sp|O27679|PELO_METTH Protein pelota homolog OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=pelA PE=3 SV=2
Length = 353
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 141/307 (45%), Gaps = 21/307 (6%)
Query: 14 GSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVK--LKLEIKVVD 71
G +++ P DDLW ++I GD + A T R++ R VK L I+V
Sbjct: 11 GVIELVPETLDDLWHLSHIIEEGDLLSARTTRRIQDTSGEKIRSDRGVKKTFYLGIRVET 70
Query: 72 YDKEGSVLRIRGKNILE---NEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAAD 128
R+R ++E + V +G+ HTLE++L+ ++K+ W L L A
Sbjct: 71 VSFHIYTGRLRATGVIERGPEDLVPMGSHHTLEVKLNTPLRIQKEHWSRWTLKRLRMAVR 130
Query: 129 PTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESA--LNKFFEN 186
+ + +++M++ +A + L+ + R I IP G I + +F+E+
Sbjct: 131 ASKNLKAIILVMEDDVAELGLIRQYGVEYRGPITGHIP---GKRIQQRDRGKLRREFYES 187
Query: 187 VLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSG 246
++++ K+ D + +IA PGF K F+ +L+ + P I K+ +L +T +G
Sbjct: 188 IVESLQKYGDLETI---IIAGPGFYKSDFYDYLM------ERYPEIAKKA--VLENTGTG 236
Query: 247 YKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAV 306
+ + EVL V + + + A E++ + +F L DP YG V A AV
Sbjct: 237 GRAGISEVLRKGTVERVSSEKRIASEIRNVNEFLEKLARDPDSVVYGKVEVMDAINMGAV 296
Query: 307 QTLLITD 313
+ LL+ D
Sbjct: 297 EKLLVLD 303
>sp|B9LQI7|PELO_HALLT Protein pelota homolog OS=Halorubrum lacusprofundi (strain ATCC
49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=pelA PE=3 SV=1
Length = 355
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 147/320 (45%), Gaps = 23/320 (7%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLR---QMASGSRD 57
M+I R E G + + P + DDLW +++ PGD V T R++ R QM
Sbjct: 1 MRISDRGYGEEGRERLTLVPENVDDLWHLAHVLEPGDLVEGDTTRRIQRNDDQMRDTGGQ 60
Query: 58 AERVKLKLEIKVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDS 117
E + + L++ V++ + + LR+ G + + ++ A HT+ +E H + K +
Sbjct: 61 REHLFVTLQVDEVEFARFANRLRVSGVIVGCSREDQLNAHHTINVEEHDEITVEKH-FKP 119
Query: 118 LALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYE 177
+ L +A + + D+A+ ++EG A++ V + T + + P G Y
Sbjct: 120 DQTERLEEATEAAENPDVAIATVEEGAAYVHTVQQYGTEEYASF--TKPTGKGD----YS 173
Query: 178 SALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 237
+ F + +A L H+D + V ++A PGFTK ++ E R L R
Sbjct: 174 RPREELFAELGEA-LAHLDADAV---ILAGPGFTKQDALDYIT--EEYRDL------ADR 221
Query: 238 IILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHV 297
I V TS+ + EVL V + K+T+ ++E + D + +A YGP+ V
Sbjct: 222 ITTVDTSAAGDRGVHEVLKRGAVDEVQKETRISKEATLIDDLTAEIAQ-GAKATYGPEDV 280
Query: 298 EVAHERMAVQTLLITDDLFR 317
A E A++TLL+ DD R
Sbjct: 281 AEAAEFGAIETLLVVDDRLR 300
>sp|Q57638|PELO_METJA Protein pelota homolog OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=pelA PE=3 SV=1
Length = 347
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 149/307 (48%), Gaps = 23/307 (7%)
Query: 16 VKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQ--MASGSRDAER-VKLKLEIKVVDY 72
+K+ P + DDLW YN+I GD + AVT R+V + + R A+R + L +E+K V++
Sbjct: 13 IKLMPENLDDLWVLYNIIEEGDKIFAVTERRVQDKGDVIRADRGAKRKMFLGIEVKNVEF 72
Query: 73 DKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTAS 132
D+ +RI G I + V +G+ HT+EI+ + K+ W ++ + +A + +
Sbjct: 73 DENTKRVRILGTIIHGPDDVPLGSHHTIEIKPFDELSIEKN-WKKWQIERIKEAIESSKR 131
Query: 133 ADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYE--SALNKFFENVLQA 190
+ VV+M + A I V R +I E + H Y+ L K + + +
Sbjct: 132 PKVLVVVMDDEEADIFEV-RDYSIK----EICSIKSHTSKKLDYKINEELKKEYYHEIAK 186
Query: 191 FLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHS 250
L D + + ++A PGF K+ F+ + ++ +L K++I++ S+ +
Sbjct: 187 VLSEYDVDNI---LVAGPGFAKNSFYN--FISSQYPEL------KNKIVVESISTTSRAG 235
Query: 251 LREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLL 310
L EV+ + + +++ A+E Q ++ + A YG V+ A E A+ TLL
Sbjct: 236 LNEVIKRGIINRIYAESRVAKETQLIEKLLEEIAKKGL-AVYGIDEVKKALEYSAIDTLL 294
Query: 311 ITDDLFR 317
++D L R
Sbjct: 295 VSDSLVR 301
>sp|A7I7Y6|PELO_METB6 Protein pelota homolog OS=Methanoregula boonei (strain 6A8) GN=pelA
PE=3 SV=1
Length = 341
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 150/318 (47%), Gaps = 39/318 (12%)
Query: 9 VENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER-------- 60
+++ G +++ P DDLW +L++PGD V A T R V G+ D R
Sbjct: 8 IKDNYGEIRLFPESIDDLWHLQHLVSPGDLVFATTFRSV-----EGATDKIRPEKVEKRP 62
Query: 61 VKLKLEIKVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIEL-HRAFVLRKDLWDSLA 119
V+L + ++ V++ G LRI G I+E+ + GA+HT+ +E + V+R+ W +
Sbjct: 63 VRLGVRVEKVEFSHHGVRLRISG--IIEH-GMDTGAYHTINVETGYEISVIRR--WRPVD 117
Query: 120 LDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESA 179
L+ L +A + + ++ ++EG A + + + E+ I G G
Sbjct: 118 LERLDRAVKASVYGVIHILTLEEGEAELF------RLRQYGPESVITITAGSGKGGETET 171
Query: 180 LNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRII 239
FF+ V+++ + V VIA PGF K+ F R+ A+ + P R I
Sbjct: 172 RTGFFDTVIKSIAE-----VSGPMVIAGPGFVKEDFVRY----AKNKNCAP----AGRAI 218
Query: 240 LVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEV 299
+ T + ++++V+ A + +I D + ++EV+ + + ++ D A YG K V
Sbjct: 219 VAETRRIGRGAVQDVIGAGTLEKLIGDLQLSREVRLMDEVLLRISRDGAIA-YGYKDVAT 277
Query: 300 AHERMAVQTLLITDDLFR 317
A E AV +L+ D L R
Sbjct: 278 AIEYGAVDEVLLADSLLR 295
>sp|Q8U150|PELO_PYRFU Protein pelota homolog OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=pelA PE=3 SV=1
Length = 356
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 155/325 (47%), Gaps = 35/325 (10%)
Query: 8 LVENGP--GSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVK--- 62
++E P G +K++ DDLW Y++I+ GD V A T+RK + S S E+V+
Sbjct: 3 ILEEKPKEGKIKIKAETLDDLWHLYHIISEGDVVYAKTLRK--QAQRSDSLRPEKVEAVP 60
Query: 63 --LKLEIKVVDYDKEGSVLRIRGKNILEN-EHVKIGAFHTLEIELHRAFVLRKDLWDSLA 119
L ++ + ++ + + LRI G I + E V +G +HTL +E ++K+ W +
Sbjct: 61 VFLGIKAEKINLHRFANQLRITGPIIYASREDVPLGRYHTLTVEPGTVITIQKEKWKNYH 120
Query: 120 LDTLHQAADPTASADLAVVLMQEGLAHILLVGR-------SMTITRSRIETSIPRKHGPA 172
++ L +A + + A + +V +++G A I +V S+T S +I R
Sbjct: 121 IERLKEAIESSKKARVMIVAIEDGEAEIAIVREYGLDFVGSITYNISGKRYNIKR----- 175
Query: 173 IAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPII 232
+ KFF V ++ + + + A++A PGF K+ F L R+ P
Sbjct: 176 ----DDEEKKFFHEVAKSMEELMKRENIEKAIVAGPGFYKENFVNFL------RENYP-- 223
Query: 233 ENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACY 292
E +++ TS G + + EV+ V + +++ ++E++ ++ + + Y
Sbjct: 224 ELAKKVVTDDTSMGGRTGIYEVIKRGTVDKVYTESRISKEIKLVEKVIEEIAKNGL-VAY 282
Query: 293 GPKHVEVAHERMAVQTLLITDDLFR 317
G K VE A AV+TL++ D L +
Sbjct: 283 GLKEVEEATNYGAVETLIVLDSLLK 307
>sp|A5UKW7|PELO_METS3 Protein pelota homolog OS=Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861) GN=pelA PE=3 SV=1
Length = 353
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 153/318 (48%), Gaps = 20/318 (6%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MKI++++ E G V + P DDLW +++ GDSV + T R++ R
Sbjct: 1 MKIVKQDKKE---GIVTLVPETLDDLWHLSHIVEVGDSVSSKTTRRIQDNTGDKLRSDRG 57
Query: 61 VK----LKLEIKVVDYDKEGSVLRIRGKNILENEH-VKIGAFHTLEIELHRAFVLRKDLW 115
VK L+++++ + + LR+ G E + +G+ HT+E++L+ ++K+ W
Sbjct: 58 VKKTFTLRIDVENITFHIFTGKLRLTGVITKGPEDLIPLGSHHTVEVKLNTPITIKKEKW 117
Query: 116 DSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAG 175
+ AL L+QA + + +VL+++ A + L+ + I+ S+ K
Sbjct: 118 ANWALKRLNQAIEASKKLAAIIVLLEDDTATLGLMRQFGIEYYGPIKGSVSGKR-IVDKN 176
Query: 176 YESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENK 235
A+ +F+E V+++ K F+ ++ V+A PGF K+ F+ ++ + + + IIE+
Sbjct: 177 RSKAIAQFYEKVIESVNK---FHDIQNIVVAGPGFVKNDFYDYIKNKHKDLADKAIIES- 232
Query: 236 SRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPK 295
T SG + + EVL V + + + A E+ A+ + + + ++ YG K
Sbjct: 233 -------TGSGGRVGIHEVLKKGTVEKLTVENRVASEMVAINNLLEEIGKNSSKVAYGEK 285
Query: 296 HVEVAHERMAVQTLLITD 313
A AV+ LL+ D
Sbjct: 286 ETVKAINLGAVKQLLVLD 303
>sp|Q2NFD9|PELO_METST Protein pelota homolog OS=Methanosphaera stadtmanae (strain DSM
3091) GN=pelA PE=3 SV=1
Length = 351
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 148/311 (47%), Gaps = 22/311 (7%)
Query: 14 GSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVK----LKLEIKV 69
G +++ P DDLW +++ D V +T R++ + +R VK L + ++
Sbjct: 11 GLIEVVPETIDDLWHLSHIVEVNDYVSTLTARRIQDNNSGKTRADRGVKKKFFLGIRVEK 70
Query: 70 VDYDKEGSVLRIRGKNILEN---EHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQA 126
+++ K +LR G I+E+ + + +G+ HT+ ++L+ + ++K +W+ +L+ L+QA
Sbjct: 71 INFHKYTGMLRFTG--IIESGPEDLIPLGSHHTINVQLNNSIRIKK-IWNKWSLERLNQA 127
Query: 127 ADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFEN 186
+ + A+ +V +++ + ++ + I I K +N+++E+
Sbjct: 128 IEASNRANEIIVAIEDNTTELGIIKQYGIDYIGPIIGDISGKQNIE-KNRAQKVNEYYED 186
Query: 187 VLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSG 246
+ + + D + + +I PGFTK+ ++ +L E +L ++IL T +G
Sbjct: 187 ITKTLTQQKDIDKL---IIIGPGFTKNGYYNYL--EENYPKL------AKKVILESTGAG 235
Query: 247 YKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAV 306
++EVL + ++ KD K A+E + + YG K V A AV
Sbjct: 236 GHAGIQEVLKNGLIESLSKDAKIAKEAALVNKLLEQIGKSSNTVTYGKKQVITASNMGAV 295
Query: 307 QTLLITDDLFR 317
+ LL+ +DL R
Sbjct: 296 EKLLVLEDLVR 306
>sp|Q46C69|PELO_METBF Protein pelota homolog OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=pelA PE=3 SV=1
Length = 350
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 152/324 (46%), Gaps = 33/324 (10%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD--- 57
M++ R+L + G + + DDLW +I GD V +VT RK A + D
Sbjct: 1 MRVTNRSL-KGREGEIAVTAETLDDLWHLKYIIEKGDLVFSVTKRK-----ADSASDKIR 54
Query: 58 ---AERVKLKLEIKVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDL 114
E+VK++L I+V D + R+R ++E + +G++HTL IE+ + K+
Sbjct: 55 PEKVEKVKVRLGIRVDDLEFHKFANRLRLHGMIER-GMDVGSYHTLNIEIGTNLSVIKEH 113
Query: 115 WDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIA 174
W + L + A + + + +V ++EG A I V S I S ++
Sbjct: 114 WKNDQLQRIKDAEEASKRPKVVMVAIEEGDADIGFVHHYGIEIYSHIRQSSGKR------ 167
Query: 175 GYESAL-NKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIE 233
E+ L N+FF V++ V VIA PGFTK+ F ++ + +IE
Sbjct: 168 --ETGLRNEFFREVVEQLRHAVPEEA--SIVIAGPGFTKEDFIKYFQETEPAMASKALIE 223
Query: 234 NKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYG 293
+ S I + SG++ EVL V ++++++ A+E ++D ++ D +A YG
Sbjct: 224 DTSMIGM----SGFQ----EVLRRGAVDRIMQESRIARESALMEDLIREISMDG-KAAYG 274
Query: 294 PKHVEVAHERMAVQTLLITDDLFR 317
V+ A AV+TLL+ D+ R
Sbjct: 275 LGDVKNALNFGAVETLLVADETLR 298
>sp|A0B6U3|PELO_METTP Protein pelota homolog OS=Methanosaeta thermophila (strain DSM 6194
/ PT) GN=pelA PE=3 SV=2
Length = 347
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 148/331 (44%), Gaps = 47/331 (14%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD--- 57
M++++RNL G + + DDLW +L++PGD V A T RK+ SG+ D
Sbjct: 1 MRVIKRNL-RGDEGEISLVAESLDDLWHLKHLVSPGDLVFATTQRKI-----SGATDKLR 54
Query: 58 ---AER--VKLKLEIKVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRK 112
AER V+L + ++ V++ + LRI G + V IG++HTL IE + K
Sbjct: 55 PEKAERRTVRLGISVEAVEFHTYSNWLRIHG---VIKSGVDIGSYHTLNIEAGSELSIIK 111
Query: 113 DLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPA 172
W L + +A + + + L++EG A I ++ + T + I
Sbjct: 112 -RWRPDELQRIEEAVAESNRPRVVLALVEEGEATIGVLRQFGVQTVAEIRG--------- 161
Query: 173 IAGYESALNKFFENVLQAFLKHVDFNVVRCA------VIASPGFTKDQFHRHLLLEAERR 226
+ +V FLK V + A V+A PGFTK+ + ++EA
Sbjct: 162 -----GSGKGSGSSVRDDFLKEVADQIANSAGDDAYVVLAGPGFTKEDLRK--VMEARYP 214
Query: 227 QLRPIIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTND 286
L R+ + SS + +EVL V +++ ++ ++E + + D + D
Sbjct: 215 DL------LKRLTMDDASSTGRSGFQEVLRRGTVDRIVEASRISRETRLMDDLMKEIATD 268
Query: 287 PTRACYGPKHVEVAHERMAVQTLLITDDLFR 317
RA YG + V A A++TL+I D L R
Sbjct: 269 -GRAAYGIREVREAANYGAIETLMIVDQLVR 298
>sp|Q8TZ98|PELO_METKA Protein pelota homolog OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=pelA PE=3 SV=1
Length = 353
Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 148/322 (45%), Gaps = 28/322 (8%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSR--DA 58
MK++ ++L G +++ P DDLW Y+++ GD V A+ R+V + A R
Sbjct: 1 MKVVEKDL---DKGYIEVLPETLDDLWHLYHVVRKGDLVFALERRRVKDERAETIRRDKG 57
Query: 59 ERVKLKLEIKV--VDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWD 116
ER + L ++V V++DK + LRI+G ++E+ + G+ HT+ + + + KD W+
Sbjct: 58 ERKPVYLGVRVEDVEFDKYANRLRIKG--VIEH-GPESGSHHTVNVTTGKRIKIVKDEWE 114
Query: 117 SLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTI-TRSRIETSIPRKHGPAIAG 175
L+ + +A L V EG I+ R + +R+ ++P K G
Sbjct: 115 RKDLERIEEAEMSRPPVMLVAVDTGEGTIGIV---RDYGLDVVARVRHNVPGKRG---GD 168
Query: 176 YESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENK 235
+ + KFF + + + V V+ PGF K F L E R + +E+
Sbjct: 169 RRAEMRKFFHRLADEIERIAEEEGVEHIVVGGPGFVKSDFAEFL---REERDIPAHVED- 224
Query: 236 SRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPK 295
T S + L E++ V +++++ A+EV+ L++ F + + YG +
Sbjct: 225 -------TGSAGEAGLIEMIRRGAVERAVEESRVAEEVKHLEEVFKRIGKGDDKVAYGVR 277
Query: 296 HVEVAHERMAVQTLLITDDLFR 317
A E A+ LL+ D+ FR
Sbjct: 278 ECLKAAEFGAIDVLLVADEKFR 299
>sp|Q9HPR5|PELO_HALSA Protein pelota homolog OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=pelA PE=3 SV=1
Length = 357
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 147/328 (44%), Gaps = 36/328 (10%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLR---QMASGSRD 57
M++ R+ VE G + + P DDLW ++ PGD V T R++ R QM +
Sbjct: 1 MQLKDRHTVEGGRERITLVPESLDDLWHLAYVLEPGDFVAGDTHRRIQRNDDQMRDTGGE 60
Query: 58 AERVKLKLEIKVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDS 117
E + + +++ V++ K + LR+ G + ++G HTL + + K W
Sbjct: 61 REHMFVTIDVGDVEFHKFSNRLRVSGTIEDCSREDQLGLHHTLNVAEREELEVEKH-WQP 119
Query: 118 LALDTLHQAADPTASADLAVVLMQEGLAHILLVGR-------SMTITRSRIETSIPRKHG 170
L+ L++A + T D+A+ ++EG AHI +V + S T T + E +
Sbjct: 120 DQLNRLNEAVEATDQPDVAIATVEEGEAHIHVVQQYGVDEQGSFTATTGKGEQN------ 173
Query: 171 PAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRP 230
+ ++ F + A + ++A PGFTK H+ E P
Sbjct: 174 ------DRGRDELFGTLADALARM----QADAIILAGPGFTKQDALDHITEEY------P 217
Query: 231 IIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRA 290
++ I +V TS+ + EVL V ++ ++T+ A+E + + + + D +A
Sbjct: 218 DLQET--ITMVDTSAVGGRGVHEVLKRGAVEDVQEETRIAEESELIDELTTQMATDG-KA 274
Query: 291 CYGPKHVEVAHERMAVQTLLITDDLFRL 318
YG V+ A E AV+ LLI D+ RL
Sbjct: 275 AYGIDEVQKAVEFGAVEDLLILDERLRL 302
>sp|B0R5R9|PELO_HALS3 Protein pelota homolog OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=pelA PE=3 SV=1
Length = 357
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 147/328 (44%), Gaps = 36/328 (10%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLR---QMASGSRD 57
M++ R+ VE G + + P DDLW ++ PGD V T R++ R QM +
Sbjct: 1 MQLKDRHTVEGGRERITLVPESLDDLWHLAYVLEPGDFVAGDTHRRIQRNDDQMRDTGGE 60
Query: 58 AERVKLKLEIKVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDS 117
E + + +++ V++ K + LR+ G + ++G HTL + + K W
Sbjct: 61 REHMFVTIDVGDVEFHKFSNRLRVSGTIEDCSREDQLGLHHTLNVAEREELEVEKH-WQP 119
Query: 118 LALDTLHQAADPTASADLAVVLMQEGLAHILLVGR-------SMTITRSRIETSIPRKHG 170
L+ L++A + T D+A+ ++EG AHI +V + S T T + E +
Sbjct: 120 DQLNRLNEAVEATDQPDVAIATVEEGEAHIHVVQQYGVDEQGSFTATTGKGEQN------ 173
Query: 171 PAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRP 230
+ ++ F + A + ++A PGFTK H+ E P
Sbjct: 174 ------DRGRDELFGTLADALARM----QADAIILAGPGFTKQDALDHITEEY------P 217
Query: 231 IIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRA 290
++ I +V TS+ + EVL V ++ ++T+ A+E + + + + D +A
Sbjct: 218 DLQET--ITMVDTSAVGGRGVHEVLKRGAVEDVQEETRIAEESELIDELTTQMATDG-KA 274
Query: 291 CYGPKHVEVAHERMAVQTLLITDDLFRL 318
YG V+ A E AV+ LLI D+ RL
Sbjct: 275 AYGIDEVQKAVEFGAVEDLLILDERLRL 302
>sp|Q8PVZ0|PELO_METMA Protein pelota homolog OS=Methanosarcina mazei (strain ATCC BAA-159
/ DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=pelA
PE=3 SV=1
Length = 350
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 153/327 (46%), Gaps = 39/327 (11%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD--- 57
M++ R+L + G + + DDLW +I GD V A+T RK A + D
Sbjct: 1 MRVTNRSL-KGREGEIAVTAETLDDLWHLKYIIEKGDMVFALTRRK-----ADSASDKLR 54
Query: 58 ---AERVKLKLEIKV--VDYDKEGSVLRIRGKNILENEH-VKIGAFHTLEIELHRAFVLR 111
E+VK++L I+V +++ K + LRI G EH + G++HTL +E+ +
Sbjct: 55 PEKVEKVKVRLGIRVEELEFHKFANRLRIHGPI----EHGMDTGSYHTLNVEIGTNISII 110
Query: 112 KDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGP 171
K+ W + L + A + + +V ++EG A I V S I S ++
Sbjct: 111 KEHWKNDQLQRIQDAEEAGKRPKVVIVAVEEGDADIGFVRHYGIEVYSHIRQSSGKR--- 167
Query: 172 AIAGYESAL-NKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRP 230
E+ L N+FF +++ V + VIA PGFTK+ F ++ +
Sbjct: 168 -----ETGLRNEFFREIVEQLRHAVPEDA--SIVIAGPGFTKEDFLKYFNETESEMASKA 220
Query: 231 IIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRA 290
+ E+ S I + SG++ EVL V ++++++ A+E ++D ++ D +A
Sbjct: 221 LTEDTSMIGM----SGFQ----EVLRRGAVDRIMQESRIARESSLMEDLIREISMDG-KA 271
Query: 291 CYGPKHVEVAHERMAVQTLLITDDLFR 317
YG V+ A AV+TLLI D+ R
Sbjct: 272 AYGFADVKNALGYGAVETLLIADETLR 298
>sp|Q8TSZ1|PELO_METAC Protein pelota homolog OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=pelA PE=3 SV=1
Length = 350
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 39/327 (11%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD--- 57
M++ R+L G + + DDLW +I GD V A+T RK A + D
Sbjct: 1 MRVTNRSL-RGREGEIAITAETLDDLWHLKYIIEKGDLVFALTKRK-----ADSASDKLR 54
Query: 58 ---AERVKLKLEIKV--VDYDKEGSVLRIRGKNILENEH-VKIGAFHTLEIELHRAFVLR 111
E+VK++L I+V +++ K + LRI G EH + +G++HTL +E+ +
Sbjct: 55 PEKVEKVKVRLGIRVEEMEFHKFANRLRIHGPI----EHGMDVGSYHTLNVEIGTNISII 110
Query: 112 KDLWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGP 171
K+ W + L + A + + +V ++EG A I V S I S ++
Sbjct: 111 KERWKNDQLQRIQDAEEAGKRPKVVIVAVEEGDADIGFVRHYGIEVYSHIRQSSGKR--- 167
Query: 172 AIAGYESAL-NKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRP 230
E+ L ++FF ++ V + VIA PGFTK+ F ++ +
Sbjct: 168 -----ENGLRSEFFREIVDQLRHAVPEDA--SIVIAGPGFTKEDFLKYFHETEPEMASKA 220
Query: 231 IIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRA 290
+ E+ S I + SG++ EVL V ++++++ A+E ++D ++ D +A
Sbjct: 221 LTEDTSMIGM----SGFQ----EVLRRGAVDRIMQESRIARESSLMEDLLREISMD-GKA 271
Query: 291 CYGPKHVEVAHERMAVQTLLITDDLFR 317
YG V+ A + AV+TLLI D+ R
Sbjct: 272 AYGFADVKNALKYGAVETLLIADETLR 298
>sp|Q2FQH4|PELO_METHJ Protein pelota homolog OS=Methanospirillum hungatei (strain JF-1 /
DSM 864) GN=pelA PE=3 SV=1
Length = 341
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 148/314 (47%), Gaps = 41/314 (13%)
Query: 14 GSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRD------AERVKLKLEI 67
G +++ P +SDDLW +NLI PG V A T+R V GS+D E+ ++L I
Sbjct: 13 GEIRLFPENSDDLWHLHNLITPGSLVYATTLRSV-----EGSQDKIRPEKQEKRPVRLGI 67
Query: 68 KVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAA 127
+V D + +R+R +E+ V IG+ HTL +E + K W L+ + +A
Sbjct: 68 RVEDVEFHEYSIRLRVFGTIES-GVDIGSHHTLNLEPGYEISVIKS-WSGSDLERIDRAI 125
Query: 128 DPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGY-ESALNKFFEN 186
+ S + ++ ++EG A + R+++ P++ AG ++A E
Sbjct: 126 KGSTSEAIHILTVEEGEAELY-----------RVQSYGPKQVWSLAAGSGKTAEVSSREE 174
Query: 187 VLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR---IILVHT 243
+A + V + VIA PGF K++ ++ + +R+ N SR +++ T
Sbjct: 175 FSEAVVSQVS-QLTGPLVIAGPGFVKEE----IIAKFKRK-------NPSRSAPLVIGDT 222
Query: 244 SSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHER 303
+G + +++EV+ + + D + A+EV L + + D A YG V A
Sbjct: 223 RAGGRRAVQEVIGQGILEKLNGDLQLAREVTCLDELMRRIGKDEPVA-YGIDAVRDATGC 281
Query: 304 MAVQTLLITDDLFR 317
AVQTL++ D L R
Sbjct: 282 GAVQTLMVVDTLLR 295
>sp|Q12W71|PELO_METBU Protein pelota homolog OS=Methanococcoides burtonii (strain DSM
6242) GN=pelA PE=3 SV=1
Length = 347
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 149/321 (46%), Gaps = 25/321 (7%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRK---VLRQMASGSRD 57
M++ +R+L N G + + P DDLW +I GD V ++T RK ++ +
Sbjct: 1 MRVTKRDLKHNREGEISLTPETLDDLWHLKYIIEKGDLVFSLTKRKADNAADKLRPEKAE 60
Query: 58 AERVKLKLEIKVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDS 117
+ V+L + ++ V++ K + LR+ G L + G +HTL IE + K W
Sbjct: 61 KKTVRLGVRVEDVEFHKFSNRLRVHG---LIEHGMDAGFYHTLNIEDGTNLSITK-YWKK 116
Query: 118 LALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYE 177
L+ +++A + + +V ++EG A I V R I I + I + G E
Sbjct: 117 DQLERVNEAEAASKRPKVILVAIEEGDADIGFV-RHYGI---EIYSHITQSSGKG----E 168
Query: 178 SALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 237
L + F + + L H + V++ PGFTKD F ++ + ++E+ S
Sbjct: 169 GTLREVFFSTILDQLTHA-MSGTESVVVSGPGFTKDDFMKYASSKNSDLVAGILVEDTSS 227
Query: 238 IILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHV 297
I + SG++ EVL V ++++++ A+E + + D + YG V
Sbjct: 228 IGM----SGFQ----EVLRRGAVDRIMEESRIARESSLMDSLLKEIALDG-KVAYGMDEV 278
Query: 298 EVAHERMAVQTLLITDDLFRL 318
+ A + AV+TLL+ D++ RL
Sbjct: 279 KQAIDFGAVETLLVADEMLRL 299
>sp|Q4JCI0|PELO_SULAC Protein pelota homolog OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=pelA PE=3 SV=1
Length = 342
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 147/317 (46%), Gaps = 30/317 (9%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
MKIL N + GS+K+ + DDLW + +I GD ++A T R + S +D+ R
Sbjct: 1 MKILEFN---DKRGSLKLHVENEDDLWLLHIIIKKGDRIVAKTTRDI-----SMGKDSRR 52
Query: 61 VKLKLEIKV--VDYDKEGSVLRIRGKNILENEHVKI-GAFHTLEIELHRAFVLRKDLWDS 117
+ + +E++V ++ + LRI G + E I GA HT+ +++ ++ K+ W +
Sbjct: 53 IPMTIELQVEYTEFQNFTTRLRIHGLILDAPERFGIKGAHHTVNLDIGDEVIIIKEQWSN 112
Query: 118 LALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYE 177
L+ + + + +A+V + E + +L+ + ++T P K +
Sbjct: 113 YELEKIREQEEKKGKLLIALVDVDEYIIALLMKQGVKILAEKSLQT--PGKDNDVV---- 166
Query: 178 SALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 237
N+ E + + V V +IA PG KD ++ + +Q I+NK
Sbjct: 167 ---NENIEEMANEIISFVKLTGVNVIIIAGPGPFKDMVNQKI------KQ----IDNKLI 213
Query: 238 IILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHV 297
+ + SS + L E+L + + ++ + AQ+++ L+ L + YG + +
Sbjct: 214 VYVDSVSSASRAGLNELLRRDIIDQVYREFEIAQQLKILESIMENLAKNTGLVVYGIEDI 273
Query: 298 EVAHERMAVQTLLITDD 314
+ A+E AV LLIT+D
Sbjct: 274 KKANELGAVDKLLITED 290
>sp|A9A8K6|PELO_METM6 Protein pelota homolog OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=pelA PE=3 SV=1
Length = 348
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 145/310 (46%), Gaps = 30/310 (9%)
Query: 16 VKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKV------LRQMASGSRDAERVKLKLEIKV 69
+K+ P + DDLW N+I P +++ AVT R+ LR R RV L ++ +
Sbjct: 13 IKLIPENLDDLWHLSNIIQPYNAIYAVTERRTEDKGDKLRADRGTKR---RVFLGIKAEK 69
Query: 70 VDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADP 129
+++ ++ + LR+ GK I + + IG++HT++IE ++K+ W L L A D
Sbjct: 70 INFHEDFNRLRVSGKIIHAPDDIPIGSYHTIDIEPLLQVSVQKN-WKKWDLARLKDAEDS 128
Query: 130 TASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQ 189
+ + VV+M + A I LV + I++ I +K E A ++ +++
Sbjct: 129 SKKPKVVVVIMDDSEADIFLVREFGIKELASIKSGISKKLD--YKQNEQAKFSYYSDIIN 186
Query: 190 AFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRP--IIENKSRIILVHTSSGY 247
+ ++ + A PGF K+ + + + + L P +IE+ + HT
Sbjct: 187 SISEYEG-----KILFAGPGFGKNNIQNY--ISEKHKDLAPNVVIESAN-----HTG--- 231
Query: 248 KHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQ 307
K L E+L + + + + + ++E Q ++ ++ A YG + V A A+
Sbjct: 232 KSGLSEILKSGIIDKIYGEARISKETQIIEKLLEEISKKGL-AAYGIESVSNAMNYSAID 290
Query: 308 TLLITDDLFR 317
TLL+TD+ R
Sbjct: 291 TLLLTDEYLR 300
>sp|A6UUY1|PELO_META3 Protein pelota homolog OS=Methanococcus aeolicus (strain Nankai-3 /
ATCC BAA-1280) GN=pelA PE=3 SV=1
Length = 348
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 141/308 (45%), Gaps = 26/308 (8%)
Query: 16 VKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKV------LRQMASGSRDAERVKLKLEIKV 69
+K+ P + DDLW N+I ++V A+T R+ LR R RV L ++ +
Sbjct: 13 IKVMPENLDDLWHLSNIILKNNAVSAMTERRTEDKGDKLRADRGTKR---RVYLGVKAEK 69
Query: 70 VDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADP 129
+ +D+ + LR+ G I E V IG++HT++IE + ++K+ W L L A +
Sbjct: 70 IKFDENTNRLRVSGPIIHGPEDVPIGSYHTIDIEPLKDVSIQKN-WKKWDLQRLKDAENS 128
Query: 130 TASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQ 189
+ VV+M + A + ++ I++ + +K E+ ++ +L+
Sbjct: 129 AKKPKIIVVIMDDSDATVFIIRDYGVKEIGHIKSRLSKKLDYKRQDQENI--NYYNEILE 186
Query: 190 AFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKH 249
+ ++A PGFTK+ F ++ L E + L+ R++ T+ +
Sbjct: 187 VMSPYEG-----KILVAGPGFTKNNFQKY-LSEKHKDMLQ-------RVVFESTNHTGRL 233
Query: 250 SLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTL 309
L EVL + V + + + ++E Q + ++ A YG V+ A A++TL
Sbjct: 234 GLAEVLKSGIVDRIYGEARLSKETQLVNKLLEEISKKGL-AVYGVDDVKNALNYSAIETL 292
Query: 310 LITDDLFR 317
LITD+ R
Sbjct: 293 LITDEFLR 300
>sp|Q18J81|PELO_HALWD Protein pelota homolog OS=Haloquadratum walsbyi (strain DSM 16790)
GN=pelA PE=3 SV=1
Length = 355
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 140/325 (43%), Gaps = 33/325 (10%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLR-----QMASGS 55
M+I R E G + P + DDLW +++ PGD V T R++ R + G
Sbjct: 1 MRIPSRGRGEEGKEQWTLVPENVDDLWHLSHVLEPGDRVGGDTTRRIQRNDENLRDTGGQ 60
Query: 56 RDAERVKLKLEIKVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLW 115
R E + + +E+ V++ + + LR+ G+ I + ++G +HTL +E H ++ K
Sbjct: 61 R--EHLVVTIEVADVEFARFANRLRVGGEIISCSREDELGHYHTLNVESHDEIIVTK--- 115
Query: 116 DSLALDT---LHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPA 172
A D + A + +AD+AV ++EG AHI T+ + E R
Sbjct: 116 -KFAPDQRKRIEAAEEAAENADVAVATIEEGEAHI------HTVAQYGTEEQFSRTATTG 168
Query: 173 IAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPII 232
Y + F A L +D + + ++A PGFTK ++ + P I
Sbjct: 169 KGEYSQPRTELFAE-FAAALSRMDVDAI---ILAGPGFTKQDAEEYI------QSNNPEI 218
Query: 233 ENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACY 292
+K + +V T++ + EVL V + T+ + E + + + + + Y
Sbjct: 219 IDK--LTIVDTAAVGDRGVHEVLKRGAVDEVQTQTRISAEAELIDELMEGIAT-GEKIAY 275
Query: 293 GPKHVEVAHERMAVQTLLITDDLFR 317
G V A E AV LL+ DD R
Sbjct: 276 GIDEVAKAAEFGAVDDLLVVDDQLR 300
>sp|A6VI74|PELO_METM7 Protein pelota homolog OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=pelA PE=3 SV=1
Length = 348
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 143/308 (46%), Gaps = 26/308 (8%)
Query: 16 VKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKV------LRQMASGSRDAERVKLKLEIKV 69
+K+ P + DDLW N+I P +++ AVT R+ LR R +V L ++ +
Sbjct: 13 IKLIPENLDDLWHLSNIIQPYNAIYAVTERRTEDKGDKLRADRGTKR---KVFLGIKAEK 69
Query: 70 VDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADP 129
+++ ++ + LR+ GK I E + IG++HT++IE ++K+ W L L A D
Sbjct: 70 INFHEDFNRLRVSGKIIHAPEDIPIGSYHTIDIEPLLQVSVQKN-WKKWDLARLKDAEDS 128
Query: 130 TASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQ 189
+ + VV+M + A I LV + I++ + +K E A ++ +++
Sbjct: 129 SKKPKVVVVIMDDSEADIFLVREFGIKELASIKSGVSKKLD--YKQNEQAKFSYYSDIIN 186
Query: 190 AFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKH 249
+ + + + + A PGF K+ + + + + L P +++ + K
Sbjct: 187 S-ISEFEGKI----LFAGPGFGKNNIQNY--ISEKHKDLAP------NVVVESANHTGKS 233
Query: 250 SLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTL 309
L E+L + + + + + ++E Q ++ ++ A YG + V A A+ TL
Sbjct: 234 GLSEILKSGIIDKIYGEARISKETQIIEKLLEEISKKGL-AAYGIESVNNAMNYSAIDTL 292
Query: 310 LITDDLFR 317
L+TD+ R
Sbjct: 293 LLTDEYLR 300
>sp|Q9HJ74|PELO_THEAC Protein pelota homolog OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=pelA PE=1 SV=1
Length = 339
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 147/320 (45%), Gaps = 30/320 (9%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQM-ASGSRDAE 59
M+IL +L +N +++E +D DLW+ N+++ GD V A+T R+V SR+ E
Sbjct: 1 MRILEEDL-KNSTYRIRIESLD--DLWYLRNILSEGDEVSAITFRRVEESADVQRSRERE 57
Query: 60 RVKLKLEIKV--VDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDS 117
R+ + + +KV +++ + LRI G I E K G ++ + + + K+ WD
Sbjct: 58 RIPITIRLKVEKIEFQDFDNRLRILGTVIEGPEDTK-GKHQSITVTVDSEISITKE-WDD 115
Query: 118 LALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYE 177
+D L +A D V M E A I L+ ++ T + G G
Sbjct: 116 QHIDLLKEATDEKYVTVYTAVAMDEDEAQIFLI---HPYGIQQVGTVYSGRSGKYAEGNY 172
Query: 178 SALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSR 237
S + +F+ ++ A LK N +I PGF +D+F R+ +R + I +
Sbjct: 173 SEAS-YFDQIVNA-LK----NYSNSIIILGPGFARDRFARY----CAQRGVNVIGSFPAN 222
Query: 238 IILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHV 297
T SG ++ E + + + ++ + + A++ + + +F + D YG
Sbjct: 223 ----RTDSG---AVYEFITSADGAKLLSNERIARDKEIVDEFLVAVKKDM--GVYGRDQT 273
Query: 298 EVAHERMAVQTLLITDDLFR 317
E A + A+ L+ITD++FR
Sbjct: 274 ESALQMGALSDLIITDEMFR 293
>sp|A4G0A4|PELO_METM5 Protein pelota homolog OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=pelA PE=3 SV=1
Length = 348
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 143/312 (45%), Gaps = 34/312 (10%)
Query: 16 VKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKV------LRQMASGSRDAERVKLKLEIKV 69
+K+ P + DDLW N+I P +++ AVT R+ LR R RV L ++ +
Sbjct: 13 IKLIPENLDDLWHLSNIIQPYNAIYAVTERRTEDKGDKLRADRGTKR---RVFLGIKAEK 69
Query: 70 VDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADP 129
+++ ++ + LR+ GK I + + IG++HT++IE ++K+ W L L +A D
Sbjct: 70 INFHEDFNRLRVSGKIIHAPDDIPIGSYHTIDIEPLLQVSVQKN-WKKWDLVRLKEAEDS 128
Query: 130 TASADLAVVLMQEGLAHILLVG----RSMTITRSRIETSIPRKHGPAIAGYESALNKFFE 185
+ + VV++ + A I LV + + +S + + K E A ++
Sbjct: 129 SKKPKVVVVILDDSEADIFLVREFGIKELVSIKSGVSKKLDYKQN------EQAKFSYYS 182
Query: 186 NVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSS 245
+++ + +F + A PGF K+ + + + + L P +++ +
Sbjct: 183 DIINSI---SEFE--GKILFAGPGFGKNNIQNY--ISEKHKDLAP------NVVVESANH 229
Query: 246 GYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMA 305
K L E+L + + + + + ++E Q ++ ++ A YG + V A A
Sbjct: 230 TGKSGLSEILKSGIIDKIYGEARISKETQVIEKLLEEISKKGL-AAYGIESVNNAMNYSA 288
Query: 306 VQTLLITDDLFR 317
+ TLL+TD+ R
Sbjct: 289 IDTLLLTDEYLR 300
>sp|Q6M133|PELO_METMP Protein pelota homolog OS=Methanococcus maripaludis (strain S2 /
LL) GN=pelA PE=3 SV=1
Length = 348
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 145/308 (47%), Gaps = 26/308 (8%)
Query: 16 VKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKV------LRQMASGSRDAERVKLKLEIKV 69
+K+ P + DDLW ++I P +++ AVT R+ LR R RV L ++ +
Sbjct: 13 IKLIPENLDDLWHLSHIIQPYNAIYAVTERRTEDKGDKLRADRGTKR---RVFLGIKAEK 69
Query: 70 VDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADP 129
+++ ++ + LR+ GK I + + IG++HT++IE ++K+ W ++ L +A D
Sbjct: 70 INFHEDFNRLRVSGKIIHAPDDIPIGSYHTIDIEPFLQVSVQKN-WKKWDIERLKEAEDS 128
Query: 130 TASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQ 189
+ + VV+M + A I LV + I++ + +K E A ++ +++
Sbjct: 129 SKKPKVVVVIMDDSEADIFLVREFGIKELASIKSGVSKKLD--YKQNEQAKFSYYSDIIN 186
Query: 190 AFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKH 249
+ + + + + A PGF ++ + + + + L P +++ + K
Sbjct: 187 S-ISEFEGKI----LFAGPGFGRNNIQNY--ISEKYKSLAP------NVVVESANHTGKS 233
Query: 250 SLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTL 309
L E+L + + + + + ++E Q ++ ++ A YG + V A A+ TL
Sbjct: 234 GLSEILKSGIIDKIYGEARISKETQVVEKLLEEISKKGL-AAYGIESVNNAMNFSAIDTL 292
Query: 310 LITDDLFR 317
L+TD+ R
Sbjct: 293 LLTDEYLR 300
>sp|A6UR75|PELO_METVS Protein pelota homolog OS=Methanococcus vannielii (strain SB / ATCC
35089 / DSM 1224) GN=pelA PE=3 SV=1
Length = 348
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 144/312 (46%), Gaps = 34/312 (10%)
Query: 16 VKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKV------LRQMASGSRDAERVKLKLEIKV 69
+K+ P + DDLW +++ ++V +VT R+ LR R RV L ++++
Sbjct: 13 IKVMPENLDDLWHLSHIVQAYNAVYSVTERRTEDKGDKLRADRGTKR---RVFLGIKVEK 69
Query: 70 VDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADP 129
V + +E + LR+ GK I E + IG++HTL+IE ++K+ W L L +A +
Sbjct: 70 VSFHEEVNRLRVSGKIIHAPEDIPIGSYHTLDIEPFTQISIQKN-WKKWDLTRLKEAEES 128
Query: 130 TASADLAVVLMQEGLAHILLVG----RSMTITRSRIETSIPRKHGPAIAGYESALNKFFE 185
+ VV++ + A I V + + +S + I K A Y +
Sbjct: 129 GKRPKVVVVILDDSEADIFTVRDFGVKELASIKSGVSKRIDSKQNEQ-AKY------LYY 181
Query: 186 NVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSS 245
N + L D + + A PGF+K+ ++ +E+ + + S+I++ T+
Sbjct: 182 NEIITTLSEFDGKI----LFAGPGFSKNNIQNYI---SEKHK-----DLASKIVIESTNH 229
Query: 246 GYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMA 305
+ L E+L + + + + + ++E Q ++ ++ A YG V+ + A
Sbjct: 230 TGRLGLSEILKSGIIDRIYGEARLSKESQIIEKLLEEISKKRL-ASYGLNSVKNSINYSA 288
Query: 306 VQTLLITDDLFR 317
V+TLLITD+ R
Sbjct: 289 VETLLITDEFLR 300
>sp|A3CU20|PELO_METMJ Protein pelota homolog OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=pelA PE=3 SV=1
Length = 341
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 137/309 (44%), Gaps = 31/309 (10%)
Query: 14 GSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER-----VKLKLEIK 68
G +++ P DDLW +L+ PGD V A T R V + A+ E+ V+L + ++
Sbjct: 13 GEIRLFPETLDDLWHLSHLVGPGDLVFATTFRSV--EAATDKLRPEKVEKRPVRLGIWVE 70
Query: 69 VVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKDLWDSLALDTLHQAAD 128
V++ + + LRI G I+E+ V + A HTL +E + K W + + + +A D
Sbjct: 71 KVEFHQHTNRLRIAG--IIES-GVDVAAHHTLNVEAGFEISVVKR-WRPVDCERIRRAVD 126
Query: 129 PTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVL 188
+A + VV ++EG A I R + T A G SAL FE L
Sbjct: 127 ASAYGVVHVVSVEEGEAQIY---RLRQFGPEWVTTVTAGSSKGADTGTRSAL---FEKTL 180
Query: 189 QAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYK 248
V V+A PGF KD+F ++ + A + R++ V T +
Sbjct: 181 DTVAA-----VTGPLVVAGPGFVKDEFAEYVKVRAP--------DLAGRMVAVETRRIGR 227
Query: 249 HSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQT 308
+++EV+ + ++ D A+EV + + + + A YG V A A +T
Sbjct: 228 GAVQEVIGQGILDRLLGDLHLAREVALMDEVLVRIATEGAVA-YGIDEVRKAVAYGAAET 286
Query: 309 LLITDDLFR 317
+L+ D L R
Sbjct: 287 VLVADTLLR 295
>sp|B8D691|PELO_DESK1 Protein pelota homolog OS=Desulfurococcus kamchatkensis (strain
1221n / DSM 18924) GN=pelA PE=3 SV=1
Length = 356
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 141/326 (43%), Gaps = 39/326 (11%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
M++L +L NG + +E D DDLW + ++ GD V A T R+V SR
Sbjct: 1 MRVLEEDL-RNGYIRILVE--DIDDLWILFMVLRKGDIVYARTSREVKPGEGGSSRRIPM 57
Query: 61 VKLKLEIKVVDYDKEGSVLRIRGKNILENEHVKI-GAFHTLEIELHRAFVLRKDLWDSLA 119
V L L ++ +++ + LRIRG + E + G +HT+ I + + ++ W +
Sbjct: 58 V-LGLRVEAIEFQEFTEKLRIRGIVVEGPEEFGVKGHYHTIAIGVGDQLAIVRETWSKHS 116
Query: 120 LDTLHQA---------ADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHG 170
LD L + + SA +AV L ++G+ H S I++ +P K
Sbjct: 117 LDILKKGVRRRRILLVSIDYDSACIAV-LTEQGVKH-----------HSEIQSDLPGKM- 163
Query: 171 PAIAGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRP 230
+E L+++ V A + + +IA PG K++ ++ RR
Sbjct: 164 -YRVEHEEILDEYLSKVASALNNVIQQEEIDAVIIAGPGDLKNKLGENI-----RR---- 213
Query: 231 IIENKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRA 290
+N+ + L TS+G + E+L V ++ D + + +++F ++ DP
Sbjct: 214 --DNRKHVYLDTTSTGGCQGISELLGRDVVKQVVGDLSIVKAKEVVEEFKRLIIKDPQLV 271
Query: 291 CYGPKHVEVAHERMAVQTLLITDDLF 316
YG V A AV +++ DL
Sbjct: 272 AYGVDDVYGAVVYAAVSRIVVAGDLL 297
>sp|O29421|PELO_ARCFU Protein pelota homolog OS=Archaeoglobus fulgidus (strain ATCC 49558
/ VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=pelA
PE=1 SV=1
Length = 344
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 141/323 (43%), Gaps = 38/323 (11%)
Query: 1 MKILRRNLVENGPGSVKMEPVDSDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAER 60
M+I+ NL +N G +K+ P DDLW +I GD V A T R AS S D R
Sbjct: 1 MQIVEENLRDN-EGEIKLIPETLDDLWHLRFIIEKGDVVFATTKR------ASQSSDKLR 53
Query: 61 -------VKLKLEIKVVDYDKEGSVLRIRGKNILENEHVKIGAFHTLEIELHRAFVLRKD 113
V+L +E++ V++ + + LR+ GK + E +HTL I + + + K
Sbjct: 54 SDKEMVTVRLGIEVEKVEFHRFANRLRVSGKIVAGIEE---SGYHTLNITVGKELSIIKK 110
Query: 114 LWDSLALDTLHQAADPTASADLAVVLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAI 173
W L+ L +A + + ++ ++ ++EG A + + + +E + G
Sbjct: 111 -WKPEQLERLRRAVEDSNRPEIVMLTIEEGYAV------AGVLRQWGVEEIFEERMGYG- 162
Query: 174 AGYESALNKFFENVLQAFLKHVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIE 233
G + +FF V A L+ DF + ++A PGF K+ F L ++ P E
Sbjct: 163 KGMGDSRKEFFGEV-AAKLESFDF---KYLIVAGPGFAKNDFLDFL------KERYP--E 210
Query: 234 NKSRIILVHTSSGYKHSLREVLDAPNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYG 293
++V SS E+L V ++ + + A+E + + + R YG
Sbjct: 211 MAKNAVVVDVSSVGSRGFIEILKRRVVDKIVGEVRLAEEAEYIDRLLEGIAKGE-RVAYG 269
Query: 294 PKHVEVAHERMAVQTLLITDDLF 316
V AH A++ LL+ D+
Sbjct: 270 LDEVREAHNYRAIEVLLVADEFL 292
>sp|C3N8Q8|PELO_SULIY Protein pelota homolog OS=Sulfolobus islandicus (strain Y.G.57.14 /
Yellowstone #1) GN=pelA PE=3 SV=1
Length = 344
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 143/299 (47%), Gaps = 31/299 (10%)
Query: 23 SDDLWFAYNLIAPGDSVMAVTVRKVLRQMASGSRDAERVKLKLEIKV--VDYDKEGSVLR 80
DDLW + ++ GD V+A T R + +++ R+ + + +KV ++ + + LR
Sbjct: 20 EDDLWILHLILEKGDKVVAKTTRDI-----GLGKESRRIPMTIVLKVDYTEFQEFTNRLR 74
Query: 81 IRGKNILEN--EHVKI-GAFHTLEIELHRAFVLRKDLWDSLALDTLHQAADPTASADLAV 137
I G I+E+ E I GA HT+ +++ ++ K W+ ALD L + AD + +A+
Sbjct: 75 IHG--IIEDAPERFGIRGAHHTINLDIGDEIIIIKQQWNKYALDKLKKQADKRSKIIIAL 132
Query: 138 VLMQEGLAHILLVGRSMTITRSRIETSIPRKHGPAIAGYESALNKFFENVLQAFLKHVDF 197
V E L I + + I + S+ + G ++AL E L ++K +
Sbjct: 133 VDFDEYLIAIPF-EQGIKILSEKSLRSLNEEEGII---EQNALEVATE--LAEYVKQYNP 186
Query: 198 NVVRCAVIASPGFTKDQFHRHLLLEAERRQLRPIIENKSRIILVHTSSGYKHSLREVLDA 257
+ + ++A PGF K++ + ++ I++NK ++ + SS + L E+L
Sbjct: 187 DAI---LLAGPGFFKEEVAK---------KVNNILKNK-KVYIDSVSSATRAGLHEILKR 233
Query: 258 PNVMNMIKDTKAAQEVQALKDFFNMLTNDPTRACYGPKHVEVAHERMAVQTLLITDDLF 316
+ ++ D + A + ++ +L P YG + V+ A E AV+T+L+ +DL
Sbjct: 234 DIIDKIMSDYEIAIGAKKMEKAMELLAKQPELVTYGLEQVKNAVEMGAVETVLLIEDLL 292
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,516,231
Number of Sequences: 539616
Number of extensions: 4416941
Number of successful extensions: 11936
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 11705
Number of HSP's gapped (non-prelim): 116
length of query: 323
length of database: 191,569,459
effective HSP length: 117
effective length of query: 206
effective length of database: 128,434,387
effective search space: 26457483722
effective search space used: 26457483722
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)