BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020682
(322 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2WOZ|A Chain A, The Novel Beta-Propeller Of The Btb-Kelch Protein Krp1
Provides The Binding Site For Lasp-1 That Is Necessary
For Pseudopodia Extension
Length = 318
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 96/234 (41%), Gaps = 26/234 (11%)
Query: 66 IPHVNATKIDRQRESVAV----IDKKGQDAERFLSATFADLPAPDLEWEQMPSAPVPRLD 121
IP +++ + +Q + V +D++ +D + L + F L EW +P P R
Sbjct: 45 IPRNHSSIVTQQNQVYVVGGLYVDEENKD--QPLQSYFFQLDNVSSEWVGLPPLPSARCL 102
Query: 122 GAAIQIKNLFYVFAGY-----GSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176
++ + YV AG SLD V Y+ KW + ++P + + H V+S
Sbjct: 103 FGLGEVDDKIYVVAGKDLQTEASLDSVL----CYDPVAAKWSEVKNLPIKV-YGH-NVIS 156
Query: 177 DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGG 236
IY + G+ + T+R F+ + + W + P+ +PR + +G++ + GG
Sbjct: 157 HNGMIYCLGGKTDD--KKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGG 214
Query: 237 SKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGG 290
E+ + +E + + W P+ + L+ +GG
Sbjct: 215 VTEDGLSASVEAFDLKT-------NKWEVMTEFPQERSSISLVSLAGSLYAIGG 261
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 60/135 (44%), Gaps = 8/135 (5%)
Query: 163 MPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGP---TSRTFVLDSETRKWDSIPPLPSPR 219
+ + + +H +V+ +Y+V G Y + S F LD+ + +W +PPLPS R
Sbjct: 41 LAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSAR 100
Query: 220 YSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACF 279
+++V+ G K+ + L+ S+ D A + + +PI G +
Sbjct: 101 CLFGLGEVDDKIYVVAG-KDLQTEASLD--SVLCYDPVAAKWSEVKNLPIKVYGHN--VI 155
Query: 280 VFNDRLFVVGGQEGD 294
N ++ +GG+ D
Sbjct: 156 SHNGMIYCLGGKTDD 170
>pdb|2VPJ|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl12
Length = 301
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 85/235 (36%), Gaps = 26/235 (11%)
Query: 73 KIDRQRESVAVIDK-------KGQDA-ERFLSATFADLPA-PDLEWEQMPSAPVPRLDGA 123
I R+R VA + G D R S D A D W + V R
Sbjct: 48 SITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAG 107
Query: 124 AIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDM--AHSHLGVVSDGRYI 181
A + ++ YV G+ D H + + N +D++ M DM A G+V I
Sbjct: 108 ATTLGDMIYVSGGF---DGSRRHTSMERYDPN--IDQWSMLGDMQTAREGAGLVVASGVI 162
Query: 182 YIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENR 241
Y + G G + D T W ++ P+ + R L ++V+GG
Sbjct: 163 YCLGGYDGLNILNSVEK---YDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTA 219
Query: 242 HTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFM 296
H +E ++I +W T + + V RL+ + G +G+ +
Sbjct: 220 HLSSVEAYNIRT-------DSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSL 267
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 61/156 (39%), Gaps = 13/156 (8%)
Query: 108 EWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDM 167
+W + R + + Y GY L+ ++S V+ Y+ W + M
Sbjct: 139 QWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNS-VEKYDPHTGHWTNVTPMATKR 197
Query: 168 AHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW 227
+ + + +++D +IY+V G G S + T W ++ + +PR +
Sbjct: 198 SGAGVALLND--HIYVVGGFDGT---AHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL 252
Query: 228 RGRLHVMGGSKENR-------HTPGLEHWSIAVKDG 256
RGRL+ + G N + P ++ W + G
Sbjct: 253 RGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMG 288
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 74/194 (38%), Gaps = 26/194 (13%)
Query: 108 EWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFT-DNKWVDRFDMPKD 166
EW +PS R A++ + + YV GY + S V+ ++T D V P +
Sbjct: 42 EWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRL-SSVECLDYTADEDGVWYSVAPMN 100
Query: 167 MAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQL 226
+ G + G IY+ G G + R D +W + + + R +
Sbjct: 101 VRRGLAGATTLGDMIYVSGGFDGSRRHTSMER---YDPNIDQWSMLGDMQTAREGAGLVV 157
Query: 227 WRGRLHVMGG-------SKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACF 279
G ++ +GG + ++ P HW+ T + R G A
Sbjct: 158 ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV------------TPMATKRSGAGVA-- 203
Query: 280 VFNDRLFVVGGQEG 293
+ ND ++VVGG +G
Sbjct: 204 LLNDHIYVVGGFDG 217
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 48/133 (36%), Gaps = 18/133 (13%)
Query: 181 IYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKEN 240
+ +V G +G Q + P D +T++W +P + R A+ R++V+GG
Sbjct: 16 VLLVVGGFGSQ-QSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGR 74
Query: 241 RHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPG 300
+E + + W + P+ D ++V GG
Sbjct: 75 SRLSSVECLDYTADE----DGVWYSVAPMNVRRGLAGATTLGDMIYVSGG---------- 120
Query: 301 SPIFKCSRRHEFM 313
F SRRH M
Sbjct: 121 ---FDGSRRHTSM 130
>pdb|3II7|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl7
Length = 306
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 71/191 (37%), Gaps = 15/191 (7%)
Query: 106 DLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFD--M 163
D W + R D A + N+ Y+ G S + +D YN + W +
Sbjct: 33 DYSWTDIRCPFEKRRDAACVFWDNVVYILGG--SQLFPIKRMDCYNVVKDSWYSKLGPPT 90
Query: 164 PKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTF-VLDSETRKWDSIPPLPSPRYSP 222
P+D S ++G+ IY G + F D+ T W + P + + R S
Sbjct: 91 PRD---SLAACAAEGK-IYTSGGS---EVGNSALYLFECYDTRTESWHTKPSMLTQRCSH 143
Query: 223 ATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFN 282
G ++V GGS N + G S V D + W P+ +
Sbjct: 144 GMVEANGLIYVCGGSLGN-NVSGRVLNSCEVYD--PATETWTELCPMIEARKNHGLVFVK 200
Query: 283 DRLFVVGGQEG 293
D++F VGGQ G
Sbjct: 201 DKIFAVGGQNG 211
>pdb|2XN4|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl2
(mayven)
pdb|2XN4|B Chain B, Crystal Structure Of The Kelch Domain Of Human Klhl2
(mayven)
Length = 302
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 6/144 (4%)
Query: 108 EWEQMPSAPVPRLDGAAIQIKNLFYVFAGYG-SLDYVHSHVDVYNFTDNKWVDRFDMPKD 166
EW + R + L Y GY + S V+ YN T N+W +M
Sbjct: 135 EWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTR 194
Query: 167 MAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQL 226
+ + +GV+++ +Y V G GP R V D T W + + R +
Sbjct: 195 RSGAGVGVLNN--LLYAVGGHDGPLVRKSVE---VYDPTTNAWRQVADMNMCRRNAGVCA 249
Query: 227 WRGRLHVMGGSKENRHTPGLEHWS 250
G L+V+GG + + +E+++
Sbjct: 250 VNGLLYVVGGDDGSCNLASVEYYN 273
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 72/193 (37%), Gaps = 14/193 (7%)
Query: 103 PAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGY-GSLDYVHSHVDVYNFTDNKWVDRF 161
P D +W + + R A + L Y G+ GS S V+ YN N+W
Sbjct: 84 PVKD-QWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGL--SSVEAYNIKSNEWF--H 138
Query: 162 DMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYS 221
P + S +GV G +Y V G Y R S ++ T +W I + + R
Sbjct: 139 VAPMNTRRSSVGVGVVGGLLYAVGG-YDVASRQCLSTVECYNATTNEWTYIAEMSTRRSG 197
Query: 222 PATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVF 281
+ L+ +GG H L S+ V D AWR + +
Sbjct: 198 AGVGVLNNLLYAVGG-----HDGPLVRKSVEVYD--PTTNAWRQVADMNMCRRNAGVCAV 250
Query: 282 NDRLFVVGGQEGD 294
N L+VVGG +G
Sbjct: 251 NGLLYVVGGDDGS 263
>pdb|3VNG|A Chain A, Crystal Structure Of Keap1 In Complex With Synthetic Small
Molecular Based On A Co-crystallization
pdb|3VNH|A Chain A, Crystal Structure Of Keap1 Soaked With Synthetic Small
Molecular
Length = 309
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 67/178 (37%), Gaps = 12/178 (6%)
Query: 117 VPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176
VPR A ++ L Y GY S+++ YN +D W+ D+ + S L
Sbjct: 14 VPRGSHMAPKVGRLIYTAGGY--FRQSLSYLEAYNPSDGTWLRLADL--QVPRSGLAGCV 69
Query: 177 DGRYIYIVSGQYG-PQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMG 235
G +Y V G+ P +S + T +W P+ PR + G ++ +G
Sbjct: 70 VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVG 129
Query: 236 GSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEG 293
GS H +E + + W P+ V N L+ VGG +G
Sbjct: 130 GSHGCIHHNSVERY-------EPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDG 180
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 48/129 (37%), Gaps = 6/129 (4%)
Query: 108 EWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDM 167
EW + R+ + L Y G+ + ++S + Y N+W R +
Sbjct: 149 EWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNS-AECYYPERNEW--RMITAMNT 205
Query: 168 AHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW 227
S GV IY G G R D ET W + P+ R + +
Sbjct: 206 IRSGAGVCVLHNCIYAAGGYDGQDQLNSVER---YDVETETWTFVAPMKHRRSALGITVH 262
Query: 228 RGRLHVMGG 236
+GR++V+GG
Sbjct: 263 QGRIYVLGG 271
>pdb|4ASC|A Chain A, Crystal Structure Of The Kelch Domain Of Human Kbtbd5
Length = 315
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 71/187 (37%), Gaps = 6/187 (3%)
Query: 68 HVNATKIDRQRESVAVIDKKGQDAERFLSATFADLPAPDLEWEQMPSAPVPRLDGAAIQI 127
HV+ + Q + + E +SA F D EW MP P PR +
Sbjct: 38 HVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA 97
Query: 128 KNLFYVFAGYGSLD--YVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVS 185
N YV G D V Y+ KW + +P + + H V+S +Y++
Sbjct: 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPY-VVYGHT-VLSHMDLVYVIG 155
Query: 186 GQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPG 245
G+ R ++ V D + +W + P+ + R + GR+ V G + T
Sbjct: 156 GKGSD--RKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSS 213
Query: 246 LEHWSIA 252
E +SI
Sbjct: 214 AEVYSIT 220
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 41/109 (37%), Gaps = 7/109 (6%)
Query: 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLG-VVSDGRYIYIVSGQ 187
+L YV G GS + + VY+ +W + P A S G V DGR I
Sbjct: 149 DLVYVIGGKGSDRKCLNKMCVYDPKKFEWKEL--APMQTARSLFGATVHDGRIIVAA--- 203
Query: 188 YGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGG 236
G G TS V KW P R S + G L+ +GG
Sbjct: 204 -GVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSLVGTLYAIGG 251
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 66/165 (40%), Gaps = 15/165 (9%)
Query: 81 VAVIDKKGQDAERFLSATFADLPAPDLEWEQM-PSAPVPRLDGAAIQIKNLFYVFAGYGS 139
V VI KG D + D EW+++ P L GA + + V AG
Sbjct: 151 VYVIGGKGSDRKCLNKMCVYD--PKKFEWKELAPMQTARSLFGATVHDGRII-VAAGVTD 207
Query: 140 LDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSG------QYGPQCR 193
+ S +VY+ TDNKW P++ S L +VS +Y + G + G
Sbjct: 208 TG-LTSSAEVYSITDNKWAPFEAFPQE--RSSLSLVSLVGTLYAIGGFATLETESGELVP 264
Query: 194 GPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSK 238
+ + + E +KW+ + L Y+ RL+V+ +K
Sbjct: 265 TELNDIWRYNEEEKKWEGV--LREIAYAAGATFLPVRLNVLRLTK 307
>pdb|1U6D|X Chain X, Crystal Structure Of The Kelch Domain Of Human Keap1
pdb|2FLU|X Chain X, Crystal Structure Of The Kelch-Neh2 Complex
Length = 308
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 67/178 (37%), Gaps = 13/178 (7%)
Query: 117 VPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176
VPR A ++ L Y GY S+++ YN +D W+ D+ + S L
Sbjct: 14 VPR-GSHAPKVGRLIYTAGGY--FRQSLSYLEAYNPSDGTWLRLADL--QVPRSGLAGCV 68
Query: 177 DGRYIYIVSGQYG-PQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMG 235
G +Y V G+ P +S + T +W P+ PR + G ++ +G
Sbjct: 69 VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVG 128
Query: 236 GSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEG 293
GS H +E + + W P+ V N L+ VGG +G
Sbjct: 129 GSHGCIHHNSVERY-------EPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDG 179
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 48/129 (37%), Gaps = 6/129 (4%)
Query: 108 EWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDM 167
EW + R+ + L Y G+ + ++S + Y N+W R +
Sbjct: 148 EWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNS-AECYYPERNEW--RMITAMNT 204
Query: 168 AHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW 227
S GV IY G G R D ET W + P+ R + +
Sbjct: 205 IRSGAGVCVLHNCIYAAGGYDGQDQLNSVER---YDVETETWTFVAPMKHRRSALGITVH 261
Query: 228 RGRLHVMGG 236
+GR++V+GG
Sbjct: 262 QGRIYVLGG 270
>pdb|4HEC|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Tuberculosis
pdb|4HEC|B Chain B, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Tuberculosis
pdb|4HVJ|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Tuberculosis In Complex With Amp
pdb|4HVJ|B Chain B, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Tuberculosis In Complex With Amp
Length = 190
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 172 LGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGR 230
+GVV+ DGR Y VS ++ P+ G RT VL P LP P A+QLWR R
Sbjct: 43 IGVVAEDGREYYAVSTEFDPERAGSWVRTHVL----------PKLPPP----ASQLWRSR 88
Query: 231 LHVMGGSKENRHTPG---LEHWS-IAVKDGKALEKAWRTEIPIP 270
+ +E G +E W+ + D AL + W +P
Sbjct: 89 QQIRLDLEEFLRIDGTDSIELWAWVGAYDHVALCQLWGPMTALP 132
>pdb|1X2J|A Chain A, Structural Basis For The Defects Of Human Lung Cancer
Somatic Mutations In The Repression Activity Of Keap1 On
Nrf2
pdb|1X2R|A Chain A, Structural Basis For The Defects Of Human Lung Cancer
Somatic Mutations In The Repression Activity Of Keap1 On
Nrf2
Length = 316
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 63/171 (36%), Gaps = 12/171 (7%)
Query: 124 AIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYI 183
A ++ L Y GY S+++ YN ++ W+ D+ + S L G +Y
Sbjct: 13 APKVGRLIYTAGGY--FRQSLSYLEAYNPSNGSWLRLADL--QVPRSGLAGCVVGGLLYA 68
Query: 184 VSGQYG-PQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRH 242
V G+ P +S + T +W + PR + G ++ +GGS H
Sbjct: 69 VGGRNNSPDGNTDSSALDCYNPMTNQWSPCASMSVPRNRIGVGVIDGHIYAVGGSHGCIH 128
Query: 243 TPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEG 293
+E + + W P+ V N L+ VGG +G
Sbjct: 129 HSSVERY-------EPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDG 172
>pdb|1ZGK|A Chain A, 1.35 Angstrom Structure Of The Kelch Domain Of Keap1
Length = 308
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 65/178 (36%), Gaps = 13/178 (7%)
Query: 117 VPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176
VPR A ++ L Y GY S+++ YN ++ W+ D+ + S L
Sbjct: 14 VPR-GSHAPKVGRLIYTAGGY--FRQSLSYLEAYNPSNGTWLRLADL--QVPRSGLAGCV 68
Query: 177 DGRYIYIVSGQYG-PQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMG 235
G +Y V G+ P +S + T +W P PR + G ++ +G
Sbjct: 69 VGGLLYAVGGRNNSPDGNTDSSALDCYNPXTNQWSPCAPXSVPRNRIGVGVIDGHIYAVG 128
Query: 236 GSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEG 293
GS H +E + + W P V N L+ VGG +G
Sbjct: 129 GSHGCIHHNSVERY-------EPERDEWHLVAPXLTRRIGVGVAVLNRLLYAVGGFDG 179
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 47/129 (36%), Gaps = 6/129 (4%)
Query: 108 EWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDM 167
EW + R+ + L Y G+ + ++S + Y N+W R +
Sbjct: 148 EWHLVAPXLTRRIGVGVAVLNRLLYAVGGFDGTNRLNS-AECYYPERNEW--RXITAXNT 204
Query: 168 AHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW 227
S GV IY G G R D ET W + P R + +
Sbjct: 205 IRSGAGVCVLHNCIYAAGGYDGQDQLNSVER---YDVETETWTFVAPXKHRRSALGITVH 261
Query: 228 RGRLHVMGG 236
+GR++V+GG
Sbjct: 262 QGRIYVLGG 270
>pdb|2DYH|A Chain A, Crystal Structure Of The Keap1 Protein In Complexed With
The N-Terminal Region Of The Nrf2 Transcription Factor
pdb|2Z32|A Chain A, Crystal Structure Of Keap1 Complexed With Prothymosin
Alpha
pdb|3ADE|A Chain A, Crystal Structure Of Keap1 In Complex With Sequestosome-
1P62
Length = 318
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 63/171 (36%), Gaps = 12/171 (7%)
Query: 124 AIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYI 183
A ++ L Y GY S+++ YN ++ W+ D+ + S L G +Y
Sbjct: 14 APKVGRLIYTAGGY--FRQSLSYLEAYNPSNGSWLRLADL--QVPRSGLAGCVVGGLLYA 69
Query: 184 VSGQYG-PQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRH 242
V G+ P +S + T +W + PR + G ++ +GGS H
Sbjct: 70 VGGRNNSPDGNTDSSALDCYNPMTNQWSPCASMSVPRNRIGVGVIDGHIYAVGGSHGCIH 129
Query: 243 TPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEG 293
+E + + W P+ V N L+ VGG +G
Sbjct: 130 HSSVERY-------EPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDG 173
>pdb|2UVK|A Chain A, Structure Of Yjht
pdb|2UVK|B Chain B, Structure Of Yjht
Length = 357
Score = 30.8 bits (68), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 6/95 (6%)
Query: 200 FVLDSETR--KWDSIPPLPS-PRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDG 256
+ LD++ + KW ++ P PR + G L+V GG +N + GL V
Sbjct: 34 YKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKN--SEGLTQVFNDVHKY 91
Query: 257 KALEKAW-RTEIPIPRGGPHRACFVFNDRLFVVGG 290
+W + P G FV N + +V GG
Sbjct: 92 NPKTNSWVKLXSHAPXGXAGHVTFVHNGKAYVTGG 126
>pdb|1DVG|A Chain A, Crystal Structure Of Rat Heme Oxygenase-1 In Complex With
Heme; Seleleno-Methionine Derivative, Mutated At
M51t,M93l, M155l,M191l.
pdb|1DVG|B Chain B, Crystal Structure Of Rat Heme Oxygenase-1 In Complex With
Heme; Seleleno-Methionine Derivative, Mutated At
M51t,M93l, M155l,M191l
Length = 267
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 220 YSPATQLWRGRLHVMGGSK-ENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRAC 278
Y+PATQ + RLH +GG+ E + + G+ L+K + + +P G A
Sbjct: 107 YTPATQHYVKRLHEVGGTHPELLVAHAYTRYLGDLSGGQVLKKIAQKALALPSSGEGLAS 166
Query: 279 FVF 281
F F
Sbjct: 167 FTF 169
>pdb|3I9T|A Chain A, Crystal Structure Of The Rat Heme Oxygenase (Ho-1) In
Comple Heme Binding Dithiothreitol (Dtt)
pdb|3I9U|A Chain A, Crystal Structure Of The Rat Heme Oxygenase (Ho-1) In
Comple Heme Binding Dithioerythritol (Dte)
Length = 263
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 220 YSPATQLWRGRLHVMGGSK-ENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRAC 278
Y+PATQ + RLH +GG+ E + + G+ L+K + + +P G A
Sbjct: 107 YTPATQHYVKRLHEVGGTHPELLVAHAYTRYLGDLSGGQVLKKIAQKAMALPSSGEGLAF 166
Query: 279 FVF 281
F F
Sbjct: 167 FTF 169
>pdb|1DVE|A Chain A, Crystal Structure Of Rat Heme Oxygenase-1 In Complex With
Heme
pdb|1IRM|A Chain A, Crystal Structure Of Apo Heme Oxygenase-1
pdb|1IRM|B Chain B, Crystal Structure Of Apo Heme Oxygenase-1
pdb|1IRM|C Chain C, Crystal Structure Of Apo Heme Oxygenase-1
pdb|1IVJ|A Chain A, Crystal Structure Of Rat Hemeoxygenase-1 In Complex With
Heme And Azide.
pdb|1IX3|A Chain A, Crystal Structure Of Rat Heme Oxygenase-1 In Complex With
Heme Bound To Cyanide
pdb|1IX4|A Chain A, Crystal Structure Of Rat Heme Oxygenase-1 In Complex With
Heme Bound To Carbon Monoxide
pdb|1J02|A Chain A, Crystal Structure Of Rat Heme Oxygenase-1-heme Bound To No
pdb|1J2C|A Chain A, Crystal Structure Of Rat Heme Oxygenase-1 In Complex With
Biliverdin Ixalpha-Iron Cluster
pdb|1UBB|A Chain A, Crystal Structure Of Rat Ho-1 In Complex With Ferrous Heme
pdb|1ULX|A Chain A, Partially Photolyzed Structure Of Co-bound Heme-heme
Oxygenase Complex
pdb|1VGI|A Chain A, Crystal Structure Of Xenon Bound Rat Heme-heme Oxygenase-1
Complex
pdb|2DY5|A Chain A, Crystal Structure Of Rat Heme Oxygenase-1 In Complex With
Heme And
2-[2-(4-Chlorophenyl)ethyl]-2-[(1h-Imidazol-1-Yl)
Methyl]-1,3-Dioxolane
pdb|2E7E|A Chain A, Bent-Binding Of Cyanide To The Heme Iron In Rat Heme
Oxygenase-1
pdb|2ZVU|A Chain A, Crystal Structure Of Rat Heme Oxygenase-1 In Complex With
Ferrous Verdoheme
pdb|4G7L|A Chain A, Crystal Structure Of Rat Heme Oxygenase-1 In Complex With
Heme And O2
pdb|4G7P|A Chain A, Rat Heme Oxygenase-1 In Complex With Heme And Co With 1 Hr
Illumination At 100 K: Laser Off
pdb|4G7T|A Chain A, Rat Heme Oxygenase-1 In Complex With Heme And Co With 1 Hr
Illumination: Laser On
pdb|4G7U|A Chain A, Rat Heme Oxygenase-1 In Complex With Heme And Co With 16
Hr Illumination: Laser Off
pdb|4G8P|A Chain A, Rat Heme Oxygenase-1 In Complex With Heme And Co With 16
Hr Illumination: Laser On
pdb|4G8U|A Chain A, Rat Heme Oxygenase-1 In Complex With Heme And O2 With 13
Hr Illumination: Laser Off
pdb|4G8W|A Chain A, Rat Heme Oxygenase-1 In Complex With Heme And O2 With 13
Hr Illumination: Laser On
pdb|4G98|A Chain A, Rat Heme Oxygenase-1 In Complex With Heme And Co At 100k
pdb|4G99|A Chain A, Rat Heme Oxygenase-1 In Complex With Heme And Co At 100 K
After Warming To 160 K
Length = 267
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 220 YSPATQLWRGRLHVMGGSK-ENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRAC 278
Y+PATQ + RLH +GG+ E + + G+ L+K + + +P G A
Sbjct: 107 YTPATQHYVKRLHEVGGTHPELLVAHAYTRYLGDLSGGQVLKKIAQKAMALPSSGEGLAF 166
Query: 279 FVF 281
F F
Sbjct: 167 FTF 169
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.139 0.462
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,615,317
Number of Sequences: 62578
Number of extensions: 458895
Number of successful extensions: 677
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 643
Number of HSP's gapped (non-prelim): 33
length of query: 322
length of database: 14,973,337
effective HSP length: 99
effective length of query: 223
effective length of database: 8,778,115
effective search space: 1957519645
effective search space used: 1957519645
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (24.3 bits)