Query 020682
Match_columns 322
No_of_seqs 245 out of 1621
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 06:38:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020682.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020682hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ii7_A Kelch-like protein 7; p 100.0 1.6E-34 5.4E-39 263.4 21.9 204 95-307 68-278 (306)
2 4asc_A Kelch repeat and BTB do 100.0 2.3E-34 7.8E-39 263.8 20.0 204 93-307 63-283 (315)
3 3ii7_A Kelch-like protein 7; p 100.0 9.9E-34 3.4E-38 258.1 22.8 199 96-307 23-231 (306)
4 1zgk_A Kelch-like ECH-associat 100.0 1.8E-33 6.1E-38 257.2 23.7 200 95-307 88-293 (308)
5 2woz_A Kelch repeat and BTB do 100.0 7E-34 2.4E-38 260.9 19.9 202 95-307 76-293 (318)
6 2xn4_A Kelch-like protein 2; s 100.0 1.8E-33 6.1E-38 256.0 22.4 200 96-306 76-281 (302)
7 2vpj_A Kelch-like protein 12; 100.0 3.6E-33 1.2E-37 253.7 23.6 200 95-307 76-284 (301)
8 1zgk_A Kelch-like ECH-associat 100.0 1.8E-33 6.3E-38 257.1 20.6 198 96-305 38-244 (308)
9 2xn4_A Kelch-like protein 2; s 100.0 5.4E-33 1.8E-37 252.8 22.9 197 96-305 29-233 (302)
10 2vpj_A Kelch-like protein 12; 100.0 1.5E-32 5E-37 249.6 23.9 199 95-306 29-236 (301)
11 4asc_A Kelch repeat and BTB do 100.0 1E-32 3.5E-37 252.8 20.8 200 97-306 13-226 (315)
12 2uvk_A YJHT; unknown function, 100.0 2.6E-31 8.9E-36 247.2 19.3 189 98-292 32-262 (357)
13 2woz_A Kelch repeat and BTB do 100.0 2.4E-31 8.2E-36 244.0 15.4 188 95-289 125-314 (318)
14 2uvk_A YJHT; unknown function, 100.0 2.5E-30 8.5E-35 240.6 18.4 196 95-295 84-329 (357)
15 2zwa_A Leucine carboxyl methyl 100.0 2.1E-28 7.2E-33 247.5 20.6 196 95-305 410-639 (695)
16 2zwa_A Leucine carboxyl methyl 99.9 1.3E-25 4.5E-30 227.0 19.2 171 108-293 378-561 (695)
17 1k3i_A Galactose oxidase precu 99.9 2.1E-24 7E-29 216.9 18.6 188 98-292 266-531 (656)
18 1k3i_A Galactose oxidase precu 99.9 1.2E-23 4.2E-28 211.3 12.3 180 98-294 167-361 (656)
19 3mbr_X Glutamine cyclotransfer 97.3 0.0062 2.1E-07 53.0 14.2 100 121-236 23-122 (243)
20 3mbr_X Glutamine cyclotransfer 97.1 0.0031 1E-07 54.9 10.7 119 163-301 15-133 (243)
21 3nol_A Glutamine cyclotransfer 96.9 0.009 3.1E-07 52.5 11.2 99 122-236 46-144 (262)
22 3nol_A Glutamine cyclotransfer 96.5 0.0062 2.1E-07 53.5 7.7 112 170-301 44-155 (262)
23 3nok_A Glutaminyl cyclase; bet 96.3 0.036 1.2E-06 48.7 11.4 96 122-236 58-153 (268)
24 3q7m_A Lipoprotein YFGL, BAMB; 96.0 0.25 8.6E-06 44.6 16.2 172 98-301 64-258 (376)
25 3dsm_A Uncharacterized protein 96.0 0.28 9.6E-06 43.8 16.1 120 97-235 17-147 (328)
26 2iwa_A Glutamine cyclotransfer 95.9 0.21 7E-06 43.9 14.3 99 122-236 24-124 (266)
27 2iwa_A Glutamine cyclotransfer 95.9 0.038 1.3E-06 48.7 9.3 111 171-301 23-135 (266)
28 3dsm_A Uncharacterized protein 95.8 0.37 1.3E-05 42.9 16.0 181 97-301 105-302 (328)
29 3q7m_A Lipoprotein YFGL, BAMB; 95.3 0.97 3.3E-05 40.6 17.2 169 98-301 114-296 (376)
30 3nok_A Glutaminyl cyclase; bet 95.3 0.052 1.8E-06 47.7 7.8 109 170-301 56-164 (268)
31 2hqs_A Protein TOLB; TOLB, PAL 95.2 0.16 5.3E-06 47.1 11.6 196 98-322 204-408 (415)
32 1l0q_A Surface layer protein; 95.1 0.082 2.8E-06 47.7 9.3 99 128-251 43-145 (391)
33 3jrp_A Fusion protein of prote 94.7 0.41 1.4E-05 42.4 12.5 172 98-294 34-232 (379)
34 1l0q_A Surface layer protein; 94.2 0.14 4.8E-06 46.1 8.4 127 98-251 55-187 (391)
35 1k8k_C P40, ARP2/3 complex 41 93.1 1 3.6E-05 39.6 12.0 105 128-252 19-126 (372)
36 3vgz_A Uncharacterized protein 92.7 2.5 8.4E-05 36.9 13.9 101 128-250 196-300 (353)
37 3jro_A Fusion protein of prote 92.3 0.92 3.2E-05 45.4 11.5 95 98-207 32-133 (753)
38 3bws_A Protein LP49; two-domai 92.0 1.4 4.9E-05 39.9 11.7 98 98-210 102-204 (433)
39 1gxr_A ESG1, transducin-like e 91.5 1.1 3.6E-05 38.8 9.8 102 128-251 108-212 (337)
40 3v9f_A Two-component system se 91.0 1.7 5.9E-05 43.5 12.0 172 98-301 470-656 (781)
41 1p22_A F-BOX/WD-repeat protein 91.0 2.1 7.3E-05 39.1 11.8 136 128-295 222-358 (435)
42 2ojh_A Uncharacterized protein 90.8 3.2 0.00011 34.6 12.0 102 98-214 23-127 (297)
43 3bws_A Protein LP49; two-domai 90.7 3.6 0.00012 37.2 12.9 98 98-212 145-249 (433)
44 3vgz_A Uncharacterized protein 90.4 6.5 0.00022 34.1 14.1 71 128-210 52-124 (353)
45 3v9f_A Two-component system se 90.3 3.6 0.00012 41.1 13.6 176 98-306 428-616 (781)
46 3jrp_A Fusion protein of prote 90.1 6.6 0.00023 34.2 13.9 135 98-252 80-239 (379)
47 2z2n_A Virginiamycin B lyase; 89.9 7.9 0.00027 32.5 14.1 141 128-301 151-295 (299)
48 1k8k_C P40, ARP2/3 complex 41 89.8 4.8 0.00016 35.2 12.7 134 98-251 31-171 (372)
49 3ow8_A WD repeat-containing pr 89.7 4.6 0.00016 35.4 12.4 102 128-251 133-235 (321)
50 3fm0_A Protein CIAO1; WDR39,SG 89.4 5.2 0.00018 35.3 12.7 140 128-294 72-217 (345)
51 3dwl_C Actin-related protein 2 89.3 0.52 1.8E-05 42.0 5.9 104 128-251 22-129 (377)
52 1gxr_A ESG1, transducin-like e 89.3 5.6 0.00019 34.0 12.6 130 98-251 120-253 (337)
53 1rwi_B Serine/threonine-protei 89.1 8.8 0.0003 31.9 14.7 119 98-236 47-168 (270)
54 1qhu_A Protein (hemopexin); be 89.0 6.7 0.00023 37.0 13.5 60 128-208 158-217 (460)
55 3ow8_A WD repeat-containing pr 88.9 4.6 0.00016 35.4 11.8 99 128-251 175-277 (321)
56 1rwi_B Serine/threonine-protei 88.7 9.4 0.00032 31.7 14.1 120 98-236 88-210 (270)
57 1got_B GT-beta; complex (GTP-b 88.6 6.2 0.00021 34.7 12.5 102 128-251 195-299 (340)
58 2ovr_B FBW7, F-BOX/WD repeat p 88.5 9.6 0.00033 34.7 14.2 134 127-294 167-300 (445)
59 3dwl_C Actin-related protein 2 88.4 2.1 7E-05 38.0 9.2 135 98-252 34-176 (377)
60 1r5m_A SIR4-interacting protei 88.3 3.3 0.00011 36.8 10.6 100 128-252 258-360 (425)
61 2xbg_A YCF48-like protein; pho 88.2 13 0.00045 32.7 17.1 117 103-236 21-140 (327)
62 1q7f_A NHL, brain tumor CG1071 88.1 11 0.00037 31.8 14.9 93 128-237 131-226 (286)
63 3u4y_A Uncharacterized protein 88.0 2.4 8.2E-05 36.8 9.2 64 128-209 9-74 (331)
64 3ott_A Two-component system se 87.9 4.8 0.00016 40.1 12.4 142 128-301 482-626 (758)
65 4ery_A WD repeat-containing pr 87.8 8.3 0.00028 33.0 12.6 100 128-251 76-178 (312)
66 3c5m_A Oligogalacturonate lyas 87.8 3.9 0.00013 36.2 10.7 128 98-236 169-301 (396)
67 4ery_A WD repeat-containing pr 87.6 5.7 0.0002 34.1 11.5 100 128-251 34-136 (312)
68 1p22_A F-BOX/WD-repeat protein 87.6 7.1 0.00024 35.6 12.6 102 126-252 140-241 (435)
69 1hxn_A Hemopexin, HPX; heme, b 87.5 12 0.0004 31.5 13.7 130 127-291 27-188 (219)
70 2ojh_A Uncharacterized protein 87.4 11 0.00039 31.1 13.1 105 98-215 63-171 (297)
71 3fm0_A Protein CIAO1; WDR39,SG 87.1 7.3 0.00025 34.3 12.1 106 128-252 27-135 (345)
72 2ovr_B FBW7, F-BOX/WD repeat p 86.7 18 0.00062 32.7 15.8 102 127-251 287-389 (445)
73 2hqs_A Protein TOLB; TOLB, PAL 86.6 6.1 0.00021 36.2 11.5 74 128-214 189-264 (415)
74 2pbi_B Guanine nucleotide-bind 86.6 11 0.00037 33.4 13.0 101 129-251 210-313 (354)
75 1kb0_A Quinohemoprotein alcoho 86.5 6.7 0.00023 38.8 12.4 97 124-236 73-182 (677)
76 3ei3_B DNA damage-binding prot 86.4 7.5 0.00026 34.4 11.8 132 98-252 97-235 (383)
77 1got_B GT-beta; complex (GTP-b 86.4 10 0.00035 33.2 12.6 103 128-251 108-213 (340)
78 4g56_B MGC81050 protein; prote 86.3 5.4 0.00018 35.5 10.8 102 128-251 150-256 (357)
79 2ynn_A Coatomer subunit beta'; 86.1 7 0.00024 33.7 11.2 102 128-251 24-126 (304)
80 4a2l_A BT_4663, two-component 85.9 10 0.00035 37.9 13.6 175 98-306 378-576 (795)
81 3v7d_B Cell division control p 85.7 11 0.00038 34.3 12.9 93 197-303 290-383 (464)
82 1kv9_A Type II quinohemoprotei 85.7 9.4 0.00032 37.6 13.0 95 124-234 62-168 (668)
83 2ad6_A Methanol dehydrogenase 85.6 8.2 0.00028 37.3 12.4 99 123-236 57-168 (571)
84 2hes_X YDR267CP; beta-propelle 85.5 5 0.00017 35.2 10.0 140 128-294 164-320 (330)
85 3jro_A Fusion protein of prote 85.2 10 0.00035 37.7 13.1 173 98-295 78-278 (753)
86 4gqb_B Methylosome protein 50; 84.8 12 0.00042 33.1 12.4 102 128-251 138-244 (344)
87 1yiq_A Quinohemoprotein alcoho 84.7 11 0.00038 37.2 13.1 95 124-234 66-173 (689)
88 2pm7_B Protein transport prote 84.1 19 0.00065 30.7 13.2 64 129-207 67-133 (297)
89 1r5m_A SIR4-interacting protei 83.6 12 0.0004 33.2 11.7 63 129-208 217-280 (425)
90 4aez_A CDC20, WD repeat-contai 83.1 20 0.0007 31.9 13.3 128 98-251 114-246 (401)
91 1vyh_C Platelet-activating fac 82.4 10 0.00035 34.4 11.0 100 128-251 119-221 (410)
92 4aez_A CDC20, WD repeat-contai 82.0 27 0.00092 31.1 13.7 89 146-251 114-203 (401)
93 1sq9_A Antiviral protein SKI8; 81.9 26 0.00089 30.7 15.2 106 127-252 24-156 (397)
94 3i2n_A WD repeat-containing pr 81.7 23 0.00079 30.3 12.7 67 129-208 31-101 (357)
95 3b7f_A Glycosyl hydrolase, BNR 81.7 20 0.0007 32.2 12.7 95 107-213 43-154 (394)
96 1vyh_C Platelet-activating fac 81.6 14 0.00048 33.4 11.6 100 128-251 161-263 (410)
97 4e54_B DNA damage-binding prot 81.6 6.9 0.00024 35.7 9.5 104 128-251 131-238 (435)
98 3v7d_B Cell division control p 81.5 31 0.001 31.2 16.2 135 128-294 321-455 (464)
99 3u4y_A Uncharacterized protein 81.3 7.3 0.00025 33.5 9.2 131 98-251 21-158 (331)
100 3ju4_A Endo-N-acetylneuraminid 81.2 35 0.0012 31.7 18.5 183 107-292 270-482 (670)
101 1pgu_A Actin interacting prote 81.1 36 0.0012 31.8 15.1 134 129-294 456-606 (615)
102 2xbg_A YCF48-like protein; pho 80.8 28 0.00097 30.5 16.9 111 106-235 65-180 (327)
103 2pm9_A Protein WEB1, protein t 80.8 7.2 0.00025 34.7 9.2 106 129-251 178-292 (416)
104 1w6s_A Methanol dehydrogenase 80.7 15 0.00053 35.7 12.0 98 123-235 57-173 (599)
105 2dg1_A DRP35, lactonase; beta 80.5 14 0.00049 31.8 10.9 95 128-235 55-152 (333)
106 3bg1_A Protein SEC13 homolog; 80.4 13 0.00046 32.1 10.7 69 129-212 71-143 (316)
107 1jmx_B Amine dehydrogenase; ox 80.1 13 0.00046 31.8 10.6 68 128-211 10-79 (349)
108 4a2l_A BT_4663, two-component 79.9 35 0.0012 33.9 14.8 175 98-305 108-295 (795)
109 3mmy_A MRNA export factor; mRN 79.8 13 0.00045 32.0 10.4 100 129-251 54-158 (368)
110 1itv_A MMP9; adaptive molecula 79.6 18 0.00061 29.7 10.5 92 128-237 64-165 (195)
111 3hfq_A Uncharacterized protein 78.9 10 0.00034 33.1 9.4 61 146-214 19-80 (347)
112 3mkq_A Coatomer beta'-subunit; 78.6 10 0.00036 37.3 10.4 100 128-251 24-126 (814)
113 4a11_B DNA excision repair pro 78.6 4.4 0.00015 35.8 7.0 105 128-251 55-173 (408)
114 3sfz_A APAF-1, apoptotic pepti 78.5 12 0.00042 39.1 11.3 136 128-295 1014-1151(1249)
115 1erj_A Transcriptional repress 78.5 12 0.00039 33.7 9.8 100 128-251 134-236 (393)
116 3i2n_A WD repeat-containing pr 77.9 15 0.00051 31.6 10.2 104 128-252 128-242 (357)
117 1pex_A Collagenase-3, MMP-13; 77.7 29 0.00099 28.7 17.1 136 123-291 28-183 (207)
118 3ei3_B DNA damage-binding prot 77.4 28 0.00095 30.5 12.0 102 130-251 87-192 (383)
119 3mkq_A Coatomer beta'-subunit; 77.1 17 0.00057 35.8 11.3 100 128-251 66-170 (814)
120 3g4e_A Regucalcin; six bladed 76.9 15 0.00052 31.4 9.8 168 98-293 74-264 (297)
121 3zwl_B Eukaryotic translation 76.7 20 0.00069 30.8 10.7 107 128-252 43-150 (369)
122 2z2n_A Virginiamycin B lyase; 76.6 32 0.0011 28.6 15.3 119 98-235 37-158 (299)
123 4e54_B DNA damage-binding prot 76.6 17 0.00058 33.0 10.5 101 128-251 176-280 (435)
124 3iz6_a 40S ribosomal protein R 76.5 39 0.0013 29.9 12.8 138 128-295 217-368 (380)
125 1gen_A Gelatinase A; hydrolase 76.1 23 0.00079 29.6 10.3 91 128-237 87-193 (218)
126 3oyo_A Hemopexin fold protein 76.0 26 0.0009 29.4 10.7 18 177-204 69-86 (225)
127 2aq5_A Coronin-1A; WD40 repeat 75.9 12 0.00042 33.3 9.3 104 128-251 93-205 (402)
128 2vdu_B TRNA (guanine-N(7)-)-me 75.8 18 0.00061 33.0 10.5 138 128-294 114-263 (450)
129 2qc5_A Streptogramin B lactona 75.6 34 0.0012 28.5 14.4 118 98-235 84-205 (300)
130 1sq9_A Antiviral protein SKI8; 75.5 16 0.00055 32.1 9.9 69 128-208 197-269 (397)
131 3odt_A Protein DOA1; ubiquitin 75.3 26 0.0009 29.3 10.9 96 127-239 27-124 (313)
132 2hes_X YDR267CP; beta-propelle 75.0 31 0.0011 29.8 11.5 146 128-294 118-272 (330)
133 3azo_A Aminopeptidase; POP fam 74.8 54 0.0018 31.3 14.1 84 145-237 217-313 (662)
134 4gqb_B Methylosome protein 50; 74.7 27 0.00091 30.8 11.1 101 128-251 92-199 (344)
135 2pm9_A Protein WEB1, protein t 74.6 28 0.00094 30.7 11.2 104 130-251 228-335 (416)
136 3odt_A Protein DOA1; ubiquitin 74.6 21 0.00073 29.9 10.1 63 128-208 154-216 (313)
137 2aq5_A Coronin-1A; WD40 repeat 74.3 43 0.0015 29.7 12.5 90 130-235 145-238 (402)
138 1su3_A Interstitial collagenas 74.2 32 0.0011 32.2 11.8 136 123-291 267-423 (450)
139 2z3z_A Dipeptidyl aminopeptida 73.8 41 0.0014 32.5 13.0 110 98-214 236-352 (706)
140 3zwl_B Eukaryotic translation 73.8 18 0.00061 31.1 9.5 68 128-212 186-255 (369)
141 4aow_A Guanine nucleotide-bind 73.4 9.5 0.00033 32.7 7.6 59 179-251 185-244 (340)
142 3bg1_A Protein SEC13 homolog; 73.2 12 0.00042 32.3 8.2 104 128-251 24-134 (316)
143 3hxj_A Pyrrolo-quinoline quino 72.7 24 0.00082 30.1 10.1 86 126-235 105-194 (330)
144 3ju4_A Endo-N-acetylneuraminid 72.5 62 0.0021 30.1 12.5 115 168-292 283-407 (670)
145 3k26_A Polycomb protein EED; W 72.4 12 0.0004 32.4 8.0 101 129-251 85-190 (366)
146 1ri6_A Putative isomerase YBHE 72.3 44 0.0015 28.3 12.4 120 128-271 189-321 (343)
147 1q7f_A NHL, brain tumor CG1071 71.9 42 0.0015 27.9 13.4 146 128-301 88-238 (286)
148 1pby_B Quinohemoprotein amine 71.0 37 0.0013 28.7 10.9 57 145-211 11-70 (337)
149 3k26_A Polycomb protein EED; W 71.0 37 0.0013 29.1 10.9 58 179-251 85-145 (366)
150 3vl1_A 26S proteasome regulato 70.7 56 0.0019 28.8 12.7 103 128-252 258-364 (420)
151 3scy_A Hypothetical bacterial 70.6 17 0.00057 31.9 8.6 99 131-235 15-116 (361)
152 4gga_A P55CDC, cell division c 70.2 44 0.0015 29.9 11.7 84 145-239 125-209 (420)
153 1flg_A Protein (quinoprotein e 70.1 32 0.0011 33.2 11.1 73 124-212 64-144 (582)
154 3sfz_A APAF-1, apoptotic pepti 69.6 31 0.0011 36.0 11.6 100 128-251 626-730 (1249)
155 4g56_B MGC81050 protein; prote 69.5 35 0.0012 30.0 10.6 108 128-251 53-168 (357)
156 3hfq_A Uncharacterized protein 69.5 47 0.0016 28.5 11.4 73 128-212 151-226 (347)
157 1qhu_A Protein (hemopexin); be 69.3 39 0.0013 31.8 11.1 96 122-237 191-322 (460)
158 2dg1_A DRP35, lactonase; beta 69.1 15 0.00051 31.7 7.8 108 98-212 67-177 (333)
159 3pe7_A Oligogalacturonate lyas 69.0 12 0.00041 32.9 7.4 112 98-216 169-283 (388)
160 2bkl_A Prolyl endopeptidase; m 69.0 51 0.0018 32.1 12.5 181 98-292 148-339 (695)
161 1itv_A MMP9; adaptive molecula 68.5 47 0.0016 27.1 14.6 135 123-291 11-165 (195)
162 2pbi_B Guanine nucleotide-bind 68.3 61 0.0021 28.3 13.0 88 146-251 177-269 (354)
163 1pjx_A Dfpase, DIISOPROPYLFLUO 68.2 36 0.0012 28.7 10.1 97 98-208 93-210 (314)
164 2pm7_B Protein transport prote 68.1 54 0.0019 27.7 14.5 99 179-295 170-278 (297)
165 3b7f_A Glycosyl hydrolase, BNR 68.1 47 0.0016 29.7 11.3 60 147-213 33-97 (394)
166 1yfq_A Cell cycle arrest prote 68.0 55 0.0019 27.7 12.5 52 228-294 262-315 (342)
167 2ynn_A Coatomer subunit beta'; 67.5 20 0.00067 30.7 8.2 100 129-251 153-257 (304)
168 2ad6_A Methanol dehydrogenase 67.4 31 0.0011 33.1 10.3 98 174-290 58-168 (571)
169 3ott_A Two-component system se 67.1 70 0.0024 31.5 13.2 119 98-239 494-618 (758)
170 1pby_B Quinohemoprotein amine 66.4 15 0.0005 31.3 7.2 78 128-211 45-129 (337)
171 2qc5_A Streptogramin B lactona 66.2 55 0.0019 27.1 15.5 117 98-235 42-163 (300)
172 1yiq_A Quinohemoprotein alcoho 65.4 39 0.0013 33.3 10.8 95 175-289 67-174 (689)
173 1pex_A Collagenase-3, MMP-13; 65.3 57 0.0019 26.9 13.3 90 128-237 79-183 (207)
174 3azo_A Aminopeptidase; POP fam 65.0 39 0.0013 32.4 10.6 107 145-268 161-282 (662)
175 1k32_A Tricorn protease; prote 64.9 46 0.0016 34.2 11.7 92 128-237 347-440 (1045)
176 4ggc_A P55CDC, cell division c 64.8 28 0.00095 29.3 8.6 90 146-251 222-313 (318)
177 2z3z_A Dipeptidyl aminopeptida 64.6 99 0.0034 29.7 13.6 65 145-213 235-301 (706)
178 1kv9_A Type II quinohemoprotei 64.0 36 0.0012 33.4 10.2 96 174-289 62-169 (668)
179 1pgu_A Actin interacting prote 62.2 1E+02 0.0034 28.6 13.8 102 128-252 499-613 (615)
180 1hxn_A Hemopexin, HPX; heme, b 62.0 69 0.0023 26.7 12.2 91 126-237 70-188 (219)
181 4a11_B DNA excision repair pro 61.7 33 0.0011 29.9 8.8 99 128-251 111-216 (408)
182 1erj_A Transcriptional repress 61.5 36 0.0012 30.3 9.1 95 178-295 134-231 (393)
183 3vl1_A 26S proteasome regulato 60.8 87 0.003 27.5 15.7 65 128-209 150-215 (420)
184 2ghs_A AGR_C_1268P; regucalcin 60.2 84 0.0029 27.1 11.7 66 128-214 60-126 (326)
185 3f3f_A Nucleoporin SEH1; struc 59.1 36 0.0012 28.6 8.3 62 178-252 22-89 (351)
186 3frx_A Guanine nucleotide-bind 58.7 86 0.0029 26.7 12.5 64 128-209 76-141 (319)
187 2xdw_A Prolyl endopeptidase; a 58.6 1.1E+02 0.0039 29.6 12.8 78 125-213 294-376 (710)
188 3c5m_A Oligogalacturonate lyas 58.2 38 0.0013 29.5 8.5 64 145-214 168-233 (396)
189 3c7x_A Matrix metalloproteinas 58.1 74 0.0025 25.9 10.0 93 127-237 60-166 (196)
190 4h5i_A Guanine nucleotide-exch 57.7 98 0.0034 27.1 12.1 131 146-295 198-336 (365)
191 3hxj_A Pyrrolo-quinoline quino 57.2 25 0.00085 30.0 7.0 81 128-234 70-153 (330)
192 3dm0_A Maltose-binding peripla 56.8 1.4E+02 0.0049 28.7 14.2 139 128-295 441-585 (694)
193 2cn3_A Xyloglucanase, beta-1,4 56.7 1.6E+02 0.0053 29.1 16.3 81 154-236 231-321 (737)
194 3mmy_A MRNA export factor; mRN 56.0 93 0.0032 26.3 12.2 63 128-208 97-162 (368)
195 1yfq_A Cell cycle arrest prote 55.5 93 0.0032 26.2 13.4 102 128-252 22-130 (342)
196 3iz6_a 40S ribosomal protein R 54.4 1.1E+02 0.0038 26.8 11.7 91 146-251 181-278 (380)
197 3c7x_A Matrix metalloproteinas 54.3 55 0.0019 26.7 8.2 62 128-208 109-177 (196)
198 1kb0_A Quinohemoprotein alcoho 54.0 1.7E+02 0.0057 28.6 18.8 106 97-212 87-207 (677)
199 3ba0_A Macrophage metalloelast 53.8 1.3E+02 0.0043 27.2 13.9 94 123-237 185-293 (365)
200 3no2_A Uncharacterized protein 53.5 1E+02 0.0035 26.0 11.2 168 98-300 16-194 (276)
201 1ri6_A Putative isomerase YBHE 53.3 19 0.00064 30.7 5.5 76 128-217 242-321 (343)
202 3scy_A Hypothetical bacterial 53.2 39 0.0013 29.3 7.7 100 181-290 15-117 (361)
203 3o4h_A Acylamino-acid-releasin 53.2 26 0.0009 33.1 7.0 72 128-214 121-192 (582)
204 3lrv_A PRE-mRNA-splicing facto 53.2 1.1E+02 0.0037 26.3 14.9 93 98-208 150-246 (343)
205 3e5z_A Putative gluconolactona 52.9 70 0.0024 26.8 9.1 66 128-212 39-105 (296)
206 3g4e_A Regucalcin; six bladed 52.7 36 0.0012 29.0 7.2 66 128-214 24-90 (297)
207 3iuj_A Prolyl endopeptidase; h 52.0 1.7E+02 0.006 28.3 14.8 130 145-289 208-344 (693)
208 1flg_A Protein (quinoprotein e 51.8 85 0.0029 30.1 10.4 52 174-234 64-123 (582)
209 3dr2_A Exported gluconolactona 51.8 65 0.0022 27.4 8.8 164 128-309 96-275 (305)
210 4gga_A P55CDC, cell division c 51.7 77 0.0026 28.3 9.6 85 197-295 125-211 (420)
211 3oyo_A Hemopexin fold protein 50.3 58 0.002 27.2 7.9 60 128-205 127-197 (225)
212 2xyi_A Probable histone-bindin 49.7 64 0.0022 29.0 8.8 101 131-251 196-307 (430)
213 3o4h_A Acylamino-acid-releasin 49.4 71 0.0024 30.0 9.3 97 101-212 136-233 (582)
214 3ba0_A Macrophage metalloelast 48.9 81 0.0028 28.5 9.1 65 128-211 284-355 (365)
215 3iuj_A Prolyl endopeptidase; h 48.8 1.1E+02 0.0039 29.6 11.0 77 124-213 287-366 (693)
216 3gre_A Serine/threonine-protei 48.3 1.4E+02 0.0049 26.3 12.3 68 128-211 181-250 (437)
217 1nir_A Nitrite reductase; hemo 48.2 1.2E+02 0.004 28.7 10.6 93 145-251 302-400 (543)
218 3lrv_A PRE-mRNA-splicing facto 47.9 1.3E+02 0.0045 25.7 13.7 56 228-295 138-194 (343)
219 2ghs_A AGR_C_1268P; regucalcin 47.6 1.3E+02 0.0046 25.7 16.2 100 98-212 72-174 (326)
220 1nir_A Nitrite reductase; hemo 46.6 1.3E+02 0.0043 28.5 10.6 62 128-208 148-213 (543)
221 2ecf_A Dipeptidyl peptidase IV 46.2 1.3E+02 0.0045 29.0 11.0 88 146-238 264-357 (741)
222 2ecf_A Dipeptidyl peptidase IV 46.2 63 0.0022 31.3 8.6 17 146-162 173-189 (741)
223 4ggc_A P55CDC, cell division c 46.0 1.3E+02 0.0043 24.9 11.1 85 197-295 221-308 (318)
224 3e5z_A Putative gluconolactona 45.8 1.3E+02 0.0044 25.0 10.6 99 98-209 91-206 (296)
225 1pjx_A Dfpase, DIISOPROPYLFLUO 45.8 1.3E+02 0.0044 25.0 11.6 99 128-236 28-135 (314)
226 1nr0_A Actin interacting prote 44.9 1.4E+02 0.0047 28.4 10.7 102 128-252 459-566 (611)
227 2hz6_A Endoplasmic reticulum t 44.8 5.1 0.00018 36.1 0.3 52 174-238 5-58 (369)
228 1su3_A Interstitial collagenas 44.5 58 0.002 30.4 7.6 65 128-211 367-437 (450)
229 2xdw_A Prolyl endopeptidase; a 43.8 2.3E+02 0.0079 27.3 13.3 86 145-238 259-356 (710)
230 3sjl_D Methylamine dehydrogena 43.7 36 0.0012 31.1 5.9 71 128-210 291-367 (386)
231 2mad_H Methylamine dehydrogena 43.0 1.1E+02 0.0037 27.3 9.1 71 128-210 278-354 (373)
232 2bkl_A Prolyl endopeptidase; m 42.9 75 0.0026 30.9 8.5 102 98-212 253-357 (695)
233 2vdu_B TRNA (guanine-N(7)-)-me 41.8 1.9E+02 0.0066 25.8 15.1 66 129-210 210-275 (450)
234 2p4o_A Hypothetical protein; p 41.8 1.4E+02 0.0047 25.3 9.3 96 107-219 20-117 (306)
235 3lp9_A LS-24; SEED albumin, pl 41.3 33 0.0011 28.8 4.9 93 126-237 70-192 (227)
236 3pe7_A Oligogalacturonate lyas 41.0 35 0.0012 29.9 5.3 65 145-214 168-233 (388)
237 2ymu_A WD-40 repeat protein; u 40.8 1.1E+02 0.0036 28.3 9.0 123 146-294 449-572 (577)
238 2xzm_R RACK1; ribosome, transl 40.6 1.7E+02 0.0059 25.0 13.4 59 178-251 87-147 (343)
239 1jmx_B Amine dehydrogenase; ox 39.4 69 0.0023 27.1 6.9 51 178-236 10-62 (349)
240 2xyi_A Probable histone-bindin 39.0 1.7E+02 0.0057 26.1 9.8 104 128-252 243-352 (430)
241 3dm0_A Maltose-binding peripla 38.3 2.4E+02 0.0082 27.0 11.4 57 180-251 532-590 (694)
242 2cn3_A Xyloglucanase, beta-1,4 38.1 3E+02 0.01 27.0 13.3 103 106-212 231-343 (737)
243 2gop_A Trilobed protease; beta 37.2 1E+02 0.0035 26.2 7.7 126 98-238 153-282 (347)
244 1yr2_A Prolyl oligopeptidase; 37.1 2.5E+02 0.0086 27.3 11.4 84 144-236 293-381 (741)
245 1yr2_A Prolyl oligopeptidase; 37.1 3E+02 0.01 26.7 13.5 87 196-293 293-384 (741)
246 4aow_A Guanine nucleotide-bind 36.8 1.8E+02 0.0063 24.2 13.3 65 128-208 97-161 (340)
247 1w6s_A Methanol dehydrogenase 36.6 1.6E+02 0.0055 28.4 9.6 75 145-234 453-532 (599)
248 3hrp_A Uncharacterized protein 35.8 2.4E+02 0.0083 25.2 10.4 95 128-236 182-286 (409)
249 3lp9_A LS-24; SEED albumin, pl 34.0 1.1E+02 0.0036 25.6 6.9 62 128-207 129-202 (227)
250 3f3f_A Nucleoporin SEH1; struc 33.9 2E+02 0.0068 23.7 10.3 53 129-188 182-239 (351)
251 1ck7_A Protein (gelatinase A); 30.5 97 0.0033 30.3 6.8 92 128-237 500-606 (631)
252 3gre_A Serine/threonine-protei 30.5 2.8E+02 0.0095 24.3 13.6 65 128-208 225-294 (437)
253 2ymu_A WD-40 repeat protein; u 29.9 3.2E+02 0.011 24.9 10.9 58 178-250 437-495 (577)
254 1nr0_A Actin interacting prote 29.1 3.7E+02 0.012 25.3 12.3 102 128-251 250-353 (611)
255 3a0f_A Xyloglucanase; beta-pro 29.1 4.3E+02 0.015 26.1 14.9 106 106-217 164-295 (763)
256 1qks_A Cytochrome CD1 nitrite 29.1 3.8E+02 0.013 25.4 12.6 80 146-235 321-407 (567)
257 2xzm_R RACK1; ribosome, transl 28.5 2.7E+02 0.0093 23.6 13.0 62 128-207 87-150 (343)
258 3v65_B Low-density lipoprotein 28.3 3.1E+02 0.011 24.2 15.7 132 127-291 169-307 (386)
259 3no2_A Uncharacterized protein 27.5 2.3E+02 0.008 23.7 8.3 65 129-213 5-73 (276)
260 3hrp_A Uncharacterized protein 27.5 3.3E+02 0.011 24.3 11.7 91 128-234 141-236 (409)
261 2oiz_A Aromatic amine dehydrog 26.9 2.1E+02 0.0073 24.9 8.2 65 128-207 265-335 (361)
262 2fp8_A Strictosidine synthase; 25.7 3E+02 0.01 23.2 8.9 76 145-236 165-247 (322)
263 2p4o_A Hypothetical protein; p 25.1 3E+02 0.01 23.0 14.8 94 99-206 97-198 (306)
264 2p9w_A MAL S 1 allergenic prot 24.1 3.8E+02 0.013 23.8 10.3 64 128-207 147-216 (334)
265 3c75_H MADH, methylamine dehyd 23.3 2.2E+02 0.0074 26.1 7.6 76 128-210 84-162 (426)
266 1sqj_A OXG-RCBH, oligoxylogluc 22.9 5.6E+02 0.019 25.3 15.3 106 106-217 152-280 (789)
267 1qks_A Cytochrome CD1 nitrite 22.8 1.1E+02 0.0039 29.2 5.7 59 128-205 166-226 (567)
268 2mad_H Methylamine dehydrogena 22.8 3.9E+02 0.013 23.5 11.4 33 177-209 277-310 (373)
269 1gen_A Gelatinase A; hydrolase 22.0 3.3E+02 0.011 22.3 16.3 96 123-237 35-144 (218)
270 1npe_A Nidogen, entactin; glyc 22.0 3.2E+02 0.011 22.2 15.6 134 128-288 47-184 (267)
271 1k32_A Tricorn protease; prote 21.9 3.7E+02 0.013 27.3 9.8 78 128-214 389-469 (1045)
272 3fvz_A Peptidyl-glycine alpha- 21.7 3.7E+02 0.012 22.7 16.6 111 129-252 208-321 (329)
273 4h5i_A Guanine nucleotide-exch 21.7 3.9E+02 0.013 23.0 10.5 109 127-251 229-341 (365)
274 3m0c_C LDL receptor, low-densi 21.5 6.1E+02 0.021 25.2 16.0 134 128-292 482-622 (791)
275 3v65_B Low-density lipoprotein 20.8 4.4E+02 0.015 23.2 12.9 86 128-235 127-220 (386)
276 3tc9_A Hypothetical hydrolase; 20.3 2.8E+02 0.0094 25.1 7.7 89 128-235 149-244 (430)
No 1
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.6e-34 Score=263.42 Aligned_cols=204 Identities=17% Similarity=0.291 Sum_probs=176.9
Q ss_pred hhhhccccccCCCCEEECCCCCCCCcccEEEEECCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEE
Q 020682 95 LSATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGV 174 (322)
Q Consensus 95 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~ 174 (322)
..++++.||+.+++|+.++++|.+|..|+++.++++|||+||.+......+++++||+.+++|+.++++|. +|..|++
T Consensus 68 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~ 145 (306)
T 3ii7_A 68 PIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLT--QRCSHGM 145 (306)
T ss_dssp BCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSS--CCBSCEE
T ss_pred CcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcC--CcceeEE
Confidence 44588999999999999999999999999999999999999997555566789999999999999999987 7999999
Q ss_pred EEeCCEEEEEecccCCCCC-CCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceEeeee
Q 020682 175 VSDGRYIYIVSGQYGPQCR-GPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAV 253 (322)
Q Consensus 175 ~~~~~~Iyv~GG~~~~~~~-~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~~v 253 (322)
++.+++|||+||..+.... ..++++++||+.+++|++++++|.+|..|++++++++||++||.+.....++++.||
T Consensus 146 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd--- 222 (306)
T 3ii7_A 146 VEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYD--- 222 (306)
T ss_dssp EEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEE---
T ss_pred EEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEee---
Confidence 9999999999998765421 125899999999999999999999999999999999999999987654455555555
Q ss_pred eccccccCceEeccCCCCCcCceeEEEECCEEEEEecCCCC------CCCCCCCCeeeee
Q 020682 254 KDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGD------FMAKPGSPIFKCS 307 (322)
Q Consensus 254 ~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~------~~~~p~~~~~~~~ 307 (322)
+++++|+.++++|..+.++++++++++|||+||.++. ..|+|....|...
T Consensus 223 ----~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~ 278 (306)
T 3ii7_A 223 ----IKLNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVAN 278 (306)
T ss_dssp ----TTTTEEEECCCCSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEE
T ss_pred ----CCCCcEEECCCCCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeC
Confidence 6699999999999999999999999999999998754 3577777666543
No 2
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=2.3e-34 Score=263.76 Aligned_cols=204 Identities=19% Similarity=0.276 Sum_probs=174.5
Q ss_pred hhhhhhccccccCCCCEEECCCCCCCCcccEEEEECCEEEEEeecCC--CCCCcceeEEEECCCCceEECCCCCCCCCCc
Q 020682 93 RFLSATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGS--LDYVHSHVDVYNFTDNKWVDRFDMPKDMAHS 170 (322)
Q Consensus 93 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~--~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~ 170 (322)
....++++.||+.+++|+.++++|.+|..|+++.++++|||+||.+. .....+++++||+.+++|+.++++|. +|.
T Consensus 63 ~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~ 140 (315)
T 4asc_A 63 DPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPY--VVY 140 (315)
T ss_dssp SCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSS--CCB
T ss_pred cccccceEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCC--ccc
Confidence 33445689999999999999999999999999999999999999752 34566789999999999999999887 799
Q ss_pred eeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceEe
Q 020682 171 HLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWS 250 (322)
Q Consensus 171 ~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~ 250 (322)
+|++++.+++|||+||...... .++++++||+.+++|++++++|.+|..|++++++++|||+||.++....+++
T Consensus 141 ~~~~~~~~~~iyv~GG~~~~~~--~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~---- 214 (315)
T 4asc_A 141 GHTVLSHMDLVYVIGGKGSDRK--CLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSA---- 214 (315)
T ss_dssp SCEEEEETTEEEEECCBCTTSC--BCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEE----
T ss_pred ceeEEEECCEEEEEeCCCCCCc--ccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceE----
Confidence 9999999999999999843332 2699999999999999999999999999999999999999998765433334
Q ss_pred eeeeccccccCceEeccCCCCCcCceeEEEECCEEEEEecCCC---------------CCCCCCCCCeeeee
Q 020682 251 IAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEG---------------DFMAKPGSPIFKCS 307 (322)
Q Consensus 251 ~~v~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~---------------~~~~~p~~~~~~~~ 307 (322)
+.||+++++|+.++++|.++.++++++++++|||+||.++ ...|+|....|+..
T Consensus 215 ---~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 215 ---EVYSITDNKWAPFEAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp ---EEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred ---EEEECCCCeEEECCCCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 4444779999999999999999999999999999999753 23578877766554
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=9.9e-34 Score=258.14 Aligned_cols=199 Identities=20% Similarity=0.330 Sum_probs=173.6
Q ss_pred hhhccccccCCCCEEECCCCCCCCcccEEEEECCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEE
Q 020682 96 SATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVV 175 (322)
Q Consensus 96 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~ 175 (322)
.++++.||+.+++|+.++++|.+|..|+++.++++|||+||.+ ....+++++||+.+++|+.++++|. +|.+|+++
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~ 98 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ--LFPIKRMDCYNVVKDSWYSKLGPPT--PRDSLAAC 98 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS--SSBCCEEEEEETTTTEEEEEECCSS--CCBSCEEE
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC--CCCcceEEEEeCCCCeEEECCCCCc--cccceeEE
Confidence 4588999999999999999999999999999999999999987 4556789999999999999999887 89999999
Q ss_pred EeCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCC----CCCcceEee
Q 020682 176 SDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRH----TPGLEHWSI 251 (322)
Q Consensus 176 ~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~----~~~~~~~~~ 251 (322)
+.+++|||+||.+.... .++++++||+.+++|++++++|.+|..|+++.++++||++||...... .+++++||
T Consensus 99 ~~~~~iyv~GG~~~~~~--~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd- 175 (306)
T 3ii7_A 99 AAEGKIYTSGGSEVGNS--ALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYD- 175 (306)
T ss_dssp EETTEEEEECCBBTTBS--CCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEE-
T ss_pred EECCEEEEECCCCCCCc--EeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeC-
Confidence 99999999999873222 269999999999999999999999999999999999999999876543 55555555
Q ss_pred eeeccccccCceEeccCCCCCcCceeEEEECCEEEEEecCCCC------CCCCCCCCeeeee
Q 020682 252 AVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGD------FMAKPGSPIFKCS 307 (322)
Q Consensus 252 ~v~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~------~~~~p~~~~~~~~ 307 (322)
+++++|+.++++|.++.++++++++++|||+||.++. ..|+|....|...
T Consensus 176 ------~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~ 231 (306)
T 3ii7_A 176 ------PATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMV 231 (306)
T ss_dssp ------TTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEEC
T ss_pred ------CCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEEC
Confidence 6699999999999999999999999999999997543 4577776655433
No 4
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.8e-33 Score=257.18 Aligned_cols=200 Identities=18% Similarity=0.281 Sum_probs=175.4
Q ss_pred hhhhccccccCCCCEEECCCCCCCCcccEEEEECCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEE
Q 020682 95 LSATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGV 174 (322)
Q Consensus 95 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~ 174 (322)
..++++.||+.+++|+.+++||.+|..|+++.++++|||+||.+... ..+++++||+.+++|+.++++|. +|..|++
T Consensus 88 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~ 164 (308)
T 1zgk_A 88 DSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCI-HHNSVERYEPERDEWHLVAPMLT--RRIGVGV 164 (308)
T ss_dssp ECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTE-ECCCEEEEETTTTEEEECCCCSS--CCBSCEE
T ss_pred ecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCc-ccccEEEECCCCCeEeECCCCCc--cccceEE
Confidence 34579999999999999999999999999999999999999986543 45679999999999999999887 7999999
Q ss_pred EEeCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceEeeeee
Q 020682 175 VSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVK 254 (322)
Q Consensus 175 ~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~~v~ 254 (322)
++.+++||++||.++... ++++++||+.+++|+.++++|.+|..|++++++++||++||.++....++++.||
T Consensus 165 ~~~~~~iyv~GG~~~~~~---~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd---- 237 (308)
T 1zgk_A 165 AVLNRLLYAVGGFDGTNR---LNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYD---- 237 (308)
T ss_dssp EEETTEEEEECCBCSSCB---CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEE----
T ss_pred EEECCEEEEEeCCCCCCc---CceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEe----
Confidence 999999999999876653 6899999999999999999999999999999999999999997665556666665
Q ss_pred ccccccCceEeccCCCCCcCceeEEEECCEEEEEecCCCCC------CCCCCCCeeeee
Q 020682 255 DGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDF------MAKPGSPIFKCS 307 (322)
Q Consensus 255 ~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~------~~~p~~~~~~~~ 307 (322)
+++++|+.+.++|..+..+++++++++|||+||.++.. .|+|....|...
T Consensus 238 ---~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 293 (308)
T 1zgk_A 238 ---VETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEV 293 (308)
T ss_dssp ---TTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEE
T ss_pred ---CCCCcEEECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeec
Confidence 56999999999999998889999999999999987643 467766655443
No 5
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=7e-34 Score=260.87 Aligned_cols=202 Identities=19% Similarity=0.351 Sum_probs=172.9
Q ss_pred hhhhccccccCCCCEEECCCCCCCCcccEEEEECCEEEEEeecCC-CCCCcceeEEEECCCCceEECCCCCCCCCCceeE
Q 020682 95 LSATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGS-LDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLG 173 (322)
Q Consensus 95 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~-~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~ 173 (322)
+...++.||+.+++|+.++++|.+|..|+++.++++|||+||.+. .....+++++||+.+++|+.++++|. +|.+|+
T Consensus 76 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~ 153 (318)
T 2woz_A 76 LQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPI--KVYGHN 153 (318)
T ss_dssp CCBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSS--CEESCE
T ss_pred ccccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCC--cccccE
Confidence 444589999999999999999999999999999999999999863 34566789999999999999998887 799999
Q ss_pred EEEeCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceEeeee
Q 020682 174 VVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAV 253 (322)
Q Consensus 174 ~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~~v 253 (322)
+++.+++|||+||...... .++++++||+.+++|++++++|.+|..|++++++++|||+||.+.....+ ++
T Consensus 154 ~~~~~~~iyv~GG~~~~~~--~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~-------~~ 224 (318)
T 2woz_A 154 VISHNGMIYCLGGKTDDKK--CTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSA-------SV 224 (318)
T ss_dssp EEEETTEEEEECCEESSSC--BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEE-------EE
T ss_pred EEEECCEEEEEcCCCCCCC--ccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccc-------eE
Confidence 9999999999999864432 26899999999999999999999999999999999999999987543333 34
Q ss_pred eccccccCceEeccCCCCCcCceeEEEECCEEEEEecCCCC---------------CCCCCCCCeeeee
Q 020682 254 KDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGD---------------FMAKPGSPIFKCS 307 (322)
Q Consensus 254 ~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~---------------~~~~p~~~~~~~~ 307 (322)
+.||+++++|+.++++|..+.++++++++++|||+||.+.. ..|+|....|...
T Consensus 225 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 225 EAFDLKTNKWEVMTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp EEEETTTCCEEECCCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred EEEECCCCeEEECCCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 44457799999999999999999999999999999997642 2467777666544
No 6
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.8e-33 Score=255.99 Aligned_cols=200 Identities=21% Similarity=0.324 Sum_probs=174.7
Q ss_pred hhhccccccCCCCEEECCCCCCCCcccEEEEECCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEE
Q 020682 96 SATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVV 175 (322)
Q Consensus 96 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~ 175 (322)
.++++.||+.+++|+.++++|.+|..|+++.++++|||+||.+... ..+++++||+.+++|+.++++|. +|..|+++
T Consensus 76 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~ 152 (302)
T 2xn4_A 76 VRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGST-GLSSVEAYNIKSNEWFHVAPMNT--RRSSVGVG 152 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSC-EEEEEEEEETTTTEEEEECCCSS--CCBSCEEE
T ss_pred ccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCc-cCceEEEEeCCCCeEeecCCCCC--cccCceEE
Confidence 3578999999999999999999999999999999999999987554 45789999999999999999987 79999999
Q ss_pred EeCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceEeeeeec
Q 020682 176 SDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKD 255 (322)
Q Consensus 176 ~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~~v~~ 255 (322)
+.+++||++||.++... ..++++++||+.+++|+.++++|.+|..|++++++++||++||.++....++++.||
T Consensus 153 ~~~~~iyv~GG~~~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd----- 226 (302)
T 2xn4_A 153 VVGGLLYAVGGYDVASR-QCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYD----- 226 (302)
T ss_dssp EETTEEEEECCEETTTT-EECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEE-----
T ss_pred EECCEEEEEeCCCCCCC-ccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEe-----
Confidence 99999999999876532 126899999999999999999999999999999999999999987765566666665
Q ss_pred cccccCceEeccCCCCCcCceeEEEECCEEEEEecCCCC------CCCCCCCCeeee
Q 020682 256 GKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGD------FMAKPGSPIFKC 306 (322)
Q Consensus 256 ~~~~~~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~------~~~~p~~~~~~~ 306 (322)
+++++|+.+.++|..+.++++++++++|||+||.++. ..|+|....|..
T Consensus 227 --~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 281 (302)
T 2xn4_A 227 --PTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTV 281 (302)
T ss_dssp --TTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred --CCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEE
Confidence 5699999999999989888999999999999998754 456777665544
No 7
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=3.6e-33 Score=253.68 Aligned_cols=200 Identities=20% Similarity=0.335 Sum_probs=175.9
Q ss_pred hhhhccccccCCCC---EEECCCCCCCCcccEEEEECCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCce
Q 020682 95 LSATFADLPAPDLE---WEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSH 171 (322)
Q Consensus 95 ~~~~~~~yd~~~~~---W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~ 171 (322)
..++++.||+.+++ |+.++++|.+|..|+++.++++|||+||.+... ..+++++||+.+++|+.++++|. +|..
T Consensus 76 ~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~--~r~~ 152 (301)
T 2vpj_A 76 RLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSR-RHTSMERYDPNIDQWSMLGDMQT--AREG 152 (301)
T ss_dssp BCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSC-BCCEEEEEETTTTEEEEEEECSS--CCBS
T ss_pred cCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCc-ccceEEEEcCCCCeEEECCCCCC--Cccc
Confidence 34578999999999 999999999999999999999999999987654 35789999999999999998887 7999
Q ss_pred eEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceEee
Q 020682 172 LGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 172 ~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
|++++.+++||++||.++... ++++++||+.+++|++++++|.+|..|+++.++++||++||.++....++++.|+
T Consensus 153 ~~~~~~~~~iyv~GG~~~~~~---~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd- 228 (301)
T 2vpj_A 153 AGLVVASGVIYCLGGYDGLNI---LNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYN- 228 (301)
T ss_dssp CEEEEETTEEEEECCBCSSCB---CCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEE-
T ss_pred ceEEEECCEEEEECCCCCCcc---cceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEe-
Confidence 999999999999999876543 6999999999999999999999999999999999999999997765556666665
Q ss_pred eeeccccccCceEeccCCCCCcCceeEEEECCEEEEEecCCCC------CCCCCCCCeeeee
Q 020682 252 AVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGD------FMAKPGSPIFKCS 307 (322)
Q Consensus 252 ~v~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~------~~~~p~~~~~~~~ 307 (322)
+++++|+.++++|.++..+++++++++|||+||.++. ..|+|....|...
T Consensus 229 ------~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 284 (301)
T 2vpj_A 229 ------IRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVV 284 (301)
T ss_dssp ------TTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEE
T ss_pred ------CCCCcEEECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEc
Confidence 5699999999999999889999999999999998754 3577777666443
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.8e-33 Score=257.09 Aligned_cols=198 Identities=18% Similarity=0.294 Sum_probs=172.9
Q ss_pred hhhccccccCCCCEEECCCCCCCCcccEEEEECCEEEEEeecC---CCCCCcceeEEEECCCCceEECCCCCCCCCCcee
Q 020682 96 SATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYG---SLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHL 172 (322)
Q Consensus 96 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~---~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~ 172 (322)
.++++.||+.+++|+.++++|.+|..++++.++++|||+||.. ......+++++||+.+++|++++++|. +|..|
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~ 115 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSV--PRNRI 115 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSS--CCBTC
T ss_pred cceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCc--Ccccc
Confidence 3478999999999999999999999999999999999999983 333455789999999999999999987 79999
Q ss_pred EEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceEeee
Q 020682 173 GVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIA 252 (322)
Q Consensus 173 ~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~~ 252 (322)
++++.+++|||+||..+... ++++++||+.+++|+.++++|.+|..|++++++++||++||.++....++++.|+
T Consensus 116 ~~~~~~~~iyv~GG~~~~~~---~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd-- 190 (308)
T 1zgk_A 116 GVGVIDGHIYAVGGSHGCIH---HNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYY-- 190 (308)
T ss_dssp EEEEETTEEEEECCEETTEE---CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEE--
T ss_pred EEEEECCEEEEEcCCCCCcc---cccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEe--
Confidence 99999999999999876543 6899999999999999999999999999999999999999997765566666665
Q ss_pred eeccccccCceEeccCCCCCcCceeEEEECCEEEEEecCCCC------CCCCCCCCeee
Q 020682 253 VKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGD------FMAKPGSPIFK 305 (322)
Q Consensus 253 v~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~------~~~~p~~~~~~ 305 (322)
+.+++|+.++++|.++..+++++++++|||+||.++. ..|+|....|.
T Consensus 191 -----~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 244 (308)
T 1zgk_A 191 -----PERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWT 244 (308)
T ss_dssp -----TTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred -----CCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEE
Confidence 5699999999999999999999999999999998643 34666665444
No 9
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=5.4e-33 Score=252.81 Aligned_cols=197 Identities=19% Similarity=0.354 Sum_probs=171.3
Q ss_pred hhhccccccCCCCEEECCCCCCCCcccEEEEECCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEE
Q 020682 96 SATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVV 175 (322)
Q Consensus 96 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~ 175 (322)
.++++.||+.+++|+.++++|.+|..|+++.++++|||+||.+... ..+++++||+.+++|++++++|. +|..|+++
T Consensus 29 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~ 105 (302)
T 2xn4_A 29 IRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSL-RVRTVDSYDPVKDQWTSVANMRD--RRSTLGAA 105 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSS-BCCCEEEEETTTTEEEEECCCSS--CCBSCEEE
T ss_pred CCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCc-cccceEEECCCCCceeeCCCCCc--cccceEEE
Confidence 3478999999999999999999999999999999999999987554 44679999999999999999987 79999999
Q ss_pred EeCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCC--CCCCcceEeeee
Q 020682 176 SDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENR--HTPGLEHWSIAV 253 (322)
Q Consensus 176 ~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~--~~~~~~~~~~~v 253 (322)
+.+++|||+||.++... ++++++||+.+++|++++++|.+|..|++++++++||++||.+... ..++++.||
T Consensus 106 ~~~~~iyv~GG~~~~~~---~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd--- 179 (302)
T 2xn4_A 106 VLNGLLYAVGGFDGSTG---LSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYN--- 179 (302)
T ss_dssp EETTEEEEEEEECSSCE---EEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEE---
T ss_pred EECCEEEEEcCCCCCcc---CceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEe---
Confidence 99999999999876543 6899999999999999999999999999999999999999986542 244555555
Q ss_pred eccccccCceEeccCCCCCcCceeEEEECCEEEEEecCCCCC------CCCCCCCeee
Q 020682 254 KDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDF------MAKPGSPIFK 305 (322)
Q Consensus 254 ~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~------~~~p~~~~~~ 305 (322)
+.+++|+.++++|.++.++++++++++|||+||.++.. .|+|....|.
T Consensus 180 ----~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 233 (302)
T 2xn4_A 180 ----ATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWR 233 (302)
T ss_dssp ----TTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEE
T ss_pred ----CCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEe
Confidence 66999999999999999999999999999999987542 4666665444
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.5e-32 Score=249.65 Aligned_cols=199 Identities=19% Similarity=0.340 Sum_probs=174.2
Q ss_pred hhhhccccccCCCCEEECCCCCCCCcccEEEEECCEEEEEeecCCCCCCcceeEEEECCCCc---eEECCCCCCCCCCce
Q 020682 95 LSATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK---WVDRFDMPKDMAHSH 171 (322)
Q Consensus 95 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~---W~~~~~~~~p~~r~~ 171 (322)
..++++.||+.+++|+.++++|.+|..|+++.++++|||+||.++.. ..+++++||+.+++ |+.++++|. +|..
T Consensus 29 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~-~~~~~~~~d~~~~~~~~W~~~~~~p~--~r~~ 105 (301)
T 2vpj_A 29 PIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRS-RLSSVECLDYTADEDGVWYSVAPMNV--RRGL 105 (301)
T ss_dssp ECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSC-BCCCEEEEETTCCTTCCCEEECCCSS--CCBS
T ss_pred ceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCc-cCceEEEEECCCCCCCeeEECCCCCC--Cccc
Confidence 34588999999999999999999999999999999999999987443 45789999999999 999999887 7999
Q ss_pred eEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceEee
Q 020682 172 LGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 172 ~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
|++++.+++|||+||..+... ++++++||+.+++|+.++++|.+|..|++++++++||++||.++....++++.|+
T Consensus 106 ~~~~~~~~~lyv~GG~~~~~~---~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d- 181 (301)
T 2vpj_A 106 AGATTLGDMIYVSGGFDGSRR---HTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYD- 181 (301)
T ss_dssp CEEEEETTEEEEECCBCSSCB---CCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEE-
T ss_pred eeEEEECCEEEEEcccCCCcc---cceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEe-
Confidence 999999999999999876543 6899999999999999999999999999999999999999987765566666666
Q ss_pred eeeccccccCceEeccCCCCCcCceeEEEECCEEEEEecCCCC------CCCCCCCCeeee
Q 020682 252 AVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGD------FMAKPGSPIFKC 306 (322)
Q Consensus 252 ~v~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~------~~~~p~~~~~~~ 306 (322)
+.+++|+.++++|.++..+++++++++|||+||.++. ..|++....|..
T Consensus 182 ------~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 236 (301)
T 2vpj_A 182 ------PHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT 236 (301)
T ss_dssp ------TTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred ------CCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence 6699999999999999999999999999999998654 246666655543
No 11
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1e-32 Score=252.75 Aligned_cols=200 Identities=16% Similarity=0.227 Sum_probs=168.2
Q ss_pred hhccccccCCCCEEECCCC--CCCCcccEEEEECCEEEEEeec-----CCCCCCcceeEEEECCCCceEECCCCCCCCCC
Q 020682 97 ATFADLPAPDLEWEQMPSA--PVPRLDGAAIQIKNLFYVFAGY-----GSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAH 169 (322)
Q Consensus 97 ~~~~~yd~~~~~W~~~~~~--p~~r~~~~~~~~~~~lyv~GG~-----~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r 169 (322)
.+++.||+.+++|+. +++ |.+|.+|+++.++++|||+||. .......+++++||+.+++|+.++++|. +|
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r 89 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPS--PR 89 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSS--CE
T ss_pred CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCc--ch
Confidence 368899999999987 666 4589999999999999999996 2223344679999999999999999987 89
Q ss_pred ceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEECCEEEEEecc-CCCCCCCCcce
Q 020682 170 SHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGS-KENRHTPGLEH 248 (322)
Q Consensus 170 ~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~-~~~~~~~~~~~ 248 (322)
.+|++++.+++|||+||.+.......++++++||+.+++|++++++|.+|..|+++.++++||++||. ......+++++
T Consensus 90 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 169 (315)
T 4asc_A 90 CLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCV 169 (315)
T ss_dssp ESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEE
T ss_pred hceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEE
Confidence 99999999999999999864221233799999999999999999999999999999999999999998 44445666666
Q ss_pred EeeeeeccccccCceEeccCCCCCcCceeEEEECCEEEEEecCCCC------CCCCCCCCeeee
Q 020682 249 WSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGD------FMAKPGSPIFKC 306 (322)
Q Consensus 249 ~~~~v~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~------~~~~p~~~~~~~ 306 (322)
|+ +.+++|+.++++|.++..+++++++++|||+||.++. ..|+|....|..
T Consensus 170 yd-------~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 226 (315)
T 4asc_A 170 YD-------PKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAP 226 (315)
T ss_dssp EE-------TTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEE
T ss_pred Ee-------CCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEE
Confidence 66 6699999999999999999999999999999998754 356776655543
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=2.6e-31 Score=247.23 Aligned_cols=189 Identities=20% Similarity=0.274 Sum_probs=153.1
Q ss_pred hccccccC--CCCEEECCCCC-CCCcccEEEEECCEEEEEeec-C---CCCCCcceeEEEECCCCceEECCCCCCCCCCc
Q 020682 98 TFADLPAP--DLEWEQMPSAP-VPRLDGAAIQIKNLFYVFAGY-G---SLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHS 170 (322)
Q Consensus 98 ~~~~yd~~--~~~W~~~~~~p-~~r~~~~~~~~~~~lyv~GG~-~---~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~ 170 (322)
+++.||+. +++|+.+++|| .+|..|++++++++|||+||. . ......+++++||+.+++|+++++++ |.+|.
T Consensus 32 ~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~-p~~r~ 110 (357)
T 2uvk_A 32 AWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA-PMGMA 110 (357)
T ss_dssp CEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC-SSCCS
T ss_pred eEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC-Ccccc
Confidence 68899997 48999999999 899999999999999999998 2 23345678999999999999999988 45899
Q ss_pred eeEEEEeCCEEEEEecccCCCC-------------------------------CCCCceEEEEeCCCCcEEEcCCCCCCC
Q 020682 171 HLGVVSDGRYIYIVSGQYGPQC-------------------------------RGPTSRTFVLDSETRKWDSIPPLPSPR 219 (322)
Q Consensus 171 ~~~~~~~~~~Iyv~GG~~~~~~-------------------------------~~~~~~v~~yd~~t~~W~~~~~~p~~r 219 (322)
+|++++.+++|||+||.+.... ...++++++||+.+++|+.++++|.+|
T Consensus 111 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~ 190 (357)
T 2uvk_A 111 GHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYG 190 (357)
T ss_dssp SEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCC
T ss_pred cceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCC
Confidence 9999999999999999754310 012589999999999999999999865
Q ss_pred C-CcEEEEECCEEEEEeccCCCC-CCCCcceEeeeeeccccccCceEeccCCC--CCcCceeEEEECCEEEEEecCC
Q 020682 220 Y-SPATQLWRGRLHVMGGSKENR-HTPGLEHWSIAVKDGKALEKAWRTEIPIP--RGGPHRACFVFNDRLFVVGGQE 292 (322)
Q Consensus 220 ~-~~~~~~~~~~Lyv~GG~~~~~-~~~~~~~~~~~v~~~~~~~~~W~~~~~~p--~~~~~~~~~~~~~~lyv~GG~~ 292 (322)
. .|++++++++|||+||..... ..++++. |++||++++|+.+.++| +.+.++++++++++|||+||.+
T Consensus 191 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~-----~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~ 262 (357)
T 2uvk_A 191 TAGAAVVNKGDKTWLINGEAKPGLRTDAVFE-----LDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAG 262 (357)
T ss_dssp CBSCEEEEETTEEEEECCEEETTEECCCEEE-----EECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEE
T ss_pred cccccEEEECCEEEEEeeecCCCcccCceEE-----EEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCcc
Confidence 5 499999999999999986432 2333433 44457899999998774 5566778999999999999964
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.97 E-value=2.4e-31 Score=243.96 Aligned_cols=188 Identities=17% Similarity=0.213 Sum_probs=157.8
Q ss_pred hhhhccccccCCCCEEECCCCCCCCcccEEEEECCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEE
Q 020682 95 LSATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGV 174 (322)
Q Consensus 95 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~ 174 (322)
..++++.||+.+++|+.++++|.+|.+|+++.++++|||+||........+++++||+.+++|+.++++|. +|..|++
T Consensus 125 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~ 202 (318)
T 2woz_A 125 SLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKT--PRSMFGV 202 (318)
T ss_dssp EEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSS--CCBSCEE
T ss_pred ccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCC--CcccceE
Confidence 34589999999999999999999999999999999999999986666667889999999999999998887 7999999
Q ss_pred EEeCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCC--cceEeee
Q 020682 175 VSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPG--LEHWSIA 252 (322)
Q Consensus 175 ~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~--~~~~~~~ 252 (322)
++.+++|||+||...... ++++++||+++++|+.++++|.+|..|+++.++++||++||.+....... ......+
T Consensus 203 ~~~~~~iyv~GG~~~~~~---~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~ 279 (318)
T 2woz_A 203 AIHKGKIVIAGGVTEDGL---SASVEAFDLKTNKWEVMTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVND 279 (318)
T ss_dssp EEETTEEEEEEEEETTEE---EEEEEEEETTTCCEEECCCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCC
T ss_pred EEECCEEEEEcCcCCCCc---cceEEEEECCCCeEEECCCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeee
Confidence 999999999999876543 68999999999999999999999999999999999999999865210000 0011122
Q ss_pred eeccccccCceEeccCCCCCcCceeEEEECCEEEEEe
Q 020682 253 VKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVG 289 (322)
Q Consensus 253 v~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~lyv~G 289 (322)
++.||+++++|+.+ +|..+..+++++++++|||+.
T Consensus 280 v~~yd~~~~~W~~~--~~~~r~~~~~~~~~~~iyi~~ 314 (318)
T 2woz_A 280 IWKYEDDKKEWAGM--LKEIRYASGASCLATRLNLFK 314 (318)
T ss_dssp EEEEETTTTEEEEE--ESCCGGGTTCEEEEEEEEGGG
T ss_pred EEEEeCCCCEehhh--cccccccccceeeCCEEEEEE
Confidence 44445779999999 566677778999999999975
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=2.5e-30 Score=240.58 Aligned_cols=196 Identities=16% Similarity=0.268 Sum_probs=153.7
Q ss_pred hhhhccccccCCCCEEECCCCC-CCCcccEEEEECCEEEEEeecCCCC--------------------------------
Q 020682 95 LSATFADLPAPDLEWEQMPSAP-VPRLDGAAIQIKNLFYVFAGYGSLD-------------------------------- 141 (322)
Q Consensus 95 ~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~lyv~GG~~~~~-------------------------------- 141 (322)
..++++.||+.+++|+.+++|+ .+|..|+++.++++|||+||.+...
T Consensus 84 ~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (357)
T 2uvk_A 84 VFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAED 163 (357)
T ss_dssp ECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGG
T ss_pred eeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccc
Confidence 4458999999999999999998 8999999999999999999986432
Q ss_pred -CCcceeEEEECCCCceEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeC--CCCcEEEcCCCCCC
Q 020682 142 -YVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDS--ETRKWDSIPPLPSP 218 (322)
Q Consensus 142 -~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~--~t~~W~~~~~~p~~ 218 (322)
...+++++||+.+++|+.++++|.+ +|.++++++.+++|||+||..+... ...+++.||+ ++++|++++++|.+
T Consensus 164 ~~~~~~v~~yd~~~~~W~~~~~~p~~-~~~~~~~~~~~~~iyv~GG~~~~~~--~~~~v~~~d~d~~~~~W~~~~~~~~~ 240 (357)
T 2uvk_A 164 YFFNKFLLSFDPSTQQWSYAGESPWY-GTAGAAVVNKGDKTWLINGEAKPGL--RTDAVFELDFTGNNLKWNKLAPVSSP 240 (357)
T ss_dssp GCCCCEEEEEETTTTEEEEEEECSSC-CCBSCEEEEETTEEEEECCEEETTE--ECCCEEEEECC---CEEEECCCSSTT
T ss_pred cCCcccEEEEeCCCCcEEECCCCCCC-CcccccEEEECCEEEEEeeecCCCc--ccCceEEEEecCCCCcEEecCCCCCC
Confidence 2457899999999999999988874 4566999999999999999875542 2588999986 99999999988665
Q ss_pred --CCCcEEEEECCEEEEEeccCCCC------------CCCCcceEeeeeeccccccCceEeccCCCCCcCceeEEEECCE
Q 020682 219 --RYSPATQLWRGRLHVMGGSKENR------------HTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDR 284 (322)
Q Consensus 219 --r~~~~~~~~~~~Lyv~GG~~~~~------------~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~ 284 (322)
|..|++++++++|||+||.+... ........+ ++.||+++++|+.++++|.++..+++++++++
T Consensus 241 ~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~ 318 (357)
T 2uvk_A 241 DGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYS--TDIHLWHNGKWDKSGELSQGRAYGVSLPWNNS 318 (357)
T ss_dssp TCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEEC--CEEEECC---CEEEEECSSCCBSSEEEEETTE
T ss_pred cccccceEEEECCEEEEEcCccccCCcccccccceeccccccceee--EEEEecCCCceeeCCCCCCCcccceeEEeCCE
Confidence 55788999999999999975321 011111222 23334669999999999999988899999999
Q ss_pred EEEEecCCCCC
Q 020682 285 LFVVGGQEGDF 295 (322)
Q Consensus 285 lyv~GG~~~~~ 295 (322)
|||+||.++..
T Consensus 319 i~v~GG~~~~~ 329 (357)
T 2uvk_A 319 LLIIGGETAGG 329 (357)
T ss_dssp EEEEEEECGGG
T ss_pred EEEEeeeCCCC
Confidence 99999987543
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.96 E-value=2.1e-28 Score=247.46 Aligned_cols=196 Identities=11% Similarity=0.104 Sum_probs=165.1
Q ss_pred hhhhccccccCCCCEEECC-C-----CCCCCcccEEEEE--CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCC
Q 020682 95 LSATFADLPAPDLEWEQMP-S-----APVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKD 166 (322)
Q Consensus 95 ~~~~~~~yd~~~~~W~~~~-~-----~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p 166 (322)
..++++.||+.+++|+.++ + +|.+|.+|+++.+ +++|||+||.+......+++|+||+.+++|+.++++|.
T Consensus 410 ~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~- 488 (695)
T 2zwa_A 410 RVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSH- 488 (695)
T ss_dssp BCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSB-
T ss_pred CcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCC-
Confidence 3457999999999999998 5 7899999999999 99999999998766567889999999999999999987
Q ss_pred CCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCC---CCCCCCCcEEEEEC---CEEEEEeccCC
Q 020682 167 MAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP---LPSPRYSPATQLWR---GRLHVMGGSKE 239 (322)
Q Consensus 167 ~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~---~p~~r~~~~~~~~~---~~Lyv~GG~~~ 239 (322)
+|.+|+++++ +++|||+||.+... ++++||+.+++|+.+++ +|.+|.+|++++++ ++|||+||...
T Consensus 489 -~R~~h~~~~~~~~~iyv~GG~~~~~------~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~ 561 (695)
T 2zwa_A 489 -TRFRHSACSLPDGNVLILGGVTEGP------AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFM 561 (695)
T ss_dssp -CCBSCEEEECTTSCEEEECCBCSSC------SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCT
T ss_pred -CcccceEEEEcCCEEEEECCCCCCC------CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCC
Confidence 8999999996 99999999986532 89999999999999986 89999999988877 89999999854
Q ss_pred C--CCCCCcceEeeeeeccccccCc------eEeccCC-CCCcCceeEEEEC-CEEEEEecCCCC---------CCCCCC
Q 020682 240 N--RHTPGLEHWSIAVKDGKALEKA------WRTEIPI-PRGGPHRACFVFN-DRLFVVGGQEGD---------FMAKPG 300 (322)
Q Consensus 240 ~--~~~~~~~~~~~~v~~~~~~~~~------W~~~~~~-p~~~~~~~~~~~~-~~lyv~GG~~~~---------~~~~p~ 300 (322)
. ...+++++|+ +.+++ |+.+.++ +.++.++++++++ ++|||+||.++. ..|+|.
T Consensus 562 ~~~~~~~~v~~yd-------~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 562 DQTTVSDKAIIFK-------YDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp TSSCBCCEEEEEE-------ECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred CCCeeeCcEEEEE-------ccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 3 3455566665 55888 8888765 4677777889999 999999997543 246777
Q ss_pred CCeee
Q 020682 301 SPIFK 305 (322)
Q Consensus 301 ~~~~~ 305 (322)
...|.
T Consensus 635 t~~W~ 639 (695)
T 2zwa_A 635 SETLT 639 (695)
T ss_dssp TTEEE
T ss_pred CCeEE
Confidence 66665
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.93 E-value=1.3e-25 Score=226.99 Aligned_cols=171 Identities=15% Similarity=0.250 Sum_probs=140.1
Q ss_pred CEEECCCCCCCCcccEEEEECCEEEEEeecCCCCCCcceeEEEECCCCceEECC-CCC---CCCCCceeEEEEe--CCEE
Q 020682 108 EWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRF-DMP---KDMAHSHLGVVSD--GRYI 181 (322)
Q Consensus 108 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~-~~~---~p~~r~~~~~~~~--~~~I 181 (322)
+|...+..|.+|.+++ ++++++|||+||.+. ...+++++||+.+++|+.++ ++| .|.+|.+|+++++ +++|
T Consensus 378 ~~~~~~~~p~rr~g~~-~~~~~~iyv~GG~~~--~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~l 454 (695)
T 2zwa_A 378 QLLECECPINRKFGDV-DVAGNDVFYMGGSNP--YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQL 454 (695)
T ss_dssp EEEECCCTTCCBSCEE-EECSSCEEEECCBSS--SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEE
T ss_pred eEeccCCCCCCceeEE-EEECCEEEEECCCCC--CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEE
Confidence 4555555566666554 448999999999876 45678999999999999988 632 2348999999999 9999
Q ss_pred EEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEE-CCEEEEEeccCCCCCCCCcceEeeeeecccccc
Q 020682 182 YIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALE 260 (322)
Q Consensus 182 yv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~ 260 (322)
||+||..+... .++++++||+.+++|+.++++|.+|..|+++++ +++|||+||.+... ++++| |+.+
T Consensus 455 yv~GG~~~~~~--~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~y-------d~~t 522 (695)
T 2zwa_A 455 LLIGGRKAPHQ--GLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLY-------NVTE 522 (695)
T ss_dssp EEECCBSSTTC--BCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEE-------ETTT
T ss_pred EEEcCCCCCCC--ccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEE-------ECCC
Confidence 99999876542 268999999999999999999999999999997 99999999986543 34444 4779
Q ss_pred CceEeccC---CCCCcCceeEEEEC---CEEEEEecCCC
Q 020682 261 KAWRTEIP---IPRGGPHRACFVFN---DRLFVVGGQEG 293 (322)
Q Consensus 261 ~~W~~~~~---~p~~~~~~~~~~~~---~~lyv~GG~~~ 293 (322)
++|+.+.+ +|.++.++++++++ ++|||+||.+.
T Consensus 523 ~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~ 561 (695)
T 2zwa_A 523 EIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFM 561 (695)
T ss_dssp TEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCT
T ss_pred CceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCC
Confidence 99999876 88888888877777 99999999853
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.92 E-value=2.1e-24 Score=216.90 Aligned_cols=188 Identities=14% Similarity=0.103 Sum_probs=147.7
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEEE-CCEEEEEeecCCCCCCcceeEEEECCCCceEECC-----CCCCC-----
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRF-----DMPKD----- 166 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~-----~~~~p----- 166 (322)
+++.||+.+++|+.+++||.+|..|+++.+ +++|||+||........+++++||+++++|+.++ +++..
T Consensus 266 ~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~ 345 (656)
T 1k3i_A 266 KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGL 345 (656)
T ss_dssp CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGG
T ss_pred ceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccce
Confidence 689999999999999999999999999999 9999999996444445678999999999999863 33221
Q ss_pred --------------------------------------------------CCCceeEEEE---eCCEEEEEecccCCCCC
Q 020682 167 --------------------------------------------------MAHSHLGVVS---DGRYIYIVSGQYGPQCR 193 (322)
Q Consensus 167 --------------------------------------------------~~r~~~~~~~---~~~~Iyv~GG~~~~~~~ 193 (322)
.++..++++. .+++|||+||.......
T Consensus 346 ~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~ 425 (656)
T 1k3i_A 346 YRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDS 425 (656)
T ss_dssp GTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSS
T ss_pred eecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCC
Confidence 0112233332 48999999997532211
Q ss_pred CCCc---eEEEEeCCCCcEEEcC--CCCCCCCCcEEEEE-CCEEEEEeccCCC------CCCCCcceEeeeeeccccccC
Q 020682 194 GPTS---RTFVLDSETRKWDSIP--PLPSPRYSPATQLW-RGRLHVMGGSKEN------RHTPGLEHWSIAVKDGKALEK 261 (322)
Q Consensus 194 ~~~~---~v~~yd~~t~~W~~~~--~~p~~r~~~~~~~~-~~~Lyv~GG~~~~------~~~~~~~~~~~~v~~~~~~~~ 261 (322)
..++ ++++||+.+++|.++. +||.+|..|.++++ +++|||+||.+.. ....++++|| |.++
T Consensus 426 ~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~yd-------p~t~ 498 (656)
T 1k3i_A 426 DATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYV-------PEQD 498 (656)
T ss_dssp BCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEE-------GGGT
T ss_pred CcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEc-------CCCC
Confidence 1134 8999999999999986 99999999998888 9999999997532 2234444444 6799
Q ss_pred ceEeccCCCCCcCceeEEEE--CCEEEEEecCC
Q 020682 262 AWRTEIPIPRGGPHRACFVF--NDRLFVVGGQE 292 (322)
Q Consensus 262 ~W~~~~~~p~~~~~~~~~~~--~~~lyv~GG~~ 292 (322)
+|+.+.++|.+|..|+++++ +++|||+||..
T Consensus 499 ~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~~ 531 (656)
T 1k3i_A 499 TFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGL 531 (656)
T ss_dssp EEEECCCCSSCCCTTEEEEECTTSCEEEEECCC
T ss_pred ceeecCCCCCccccccHhhcCCCcEEEecCCCC
Confidence 99999999988888888887 99999999953
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.90 E-value=1.2e-23 Score=211.25 Aligned_cols=180 Identities=16% Similarity=0.228 Sum_probs=144.1
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEEE--CCEEEEEeecCCCC-----CCcceeEEEECCCCceEECCCCCCCCCCc
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLD-----YVHSHVDVYNFTDNKWVDRFDMPKDMAHS 170 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~-----~~~~~v~~yd~~~~~W~~~~~~~~p~~r~ 170 (322)
.+..||+.+++|+.++++|. ..+.++++ +++|||+||.+... ....++++||+.+++|+.++.++.+..+.
T Consensus 167 ~~~~~dp~~~~W~~~~~~P~--~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~ 244 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDLPI--VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMF 244 (656)
T ss_dssp CCCCCCTTSCEEEEEEECSS--CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCS
T ss_pred ccccCCCCCCeeeeeccCCC--CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCc
Confidence 46789999999999887754 66666766 99999999985432 12347999999999999998887743334
Q ss_pred eeEEEE-eCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEE-CCEEEEEecc-CCCCCCCCcc
Q 020682 171 HLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMGGS-KENRHTPGLE 247 (322)
Q Consensus 171 ~~~~~~-~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~Lyv~GG~-~~~~~~~~~~ 247 (322)
++++++ .+++||++||... .++++||+.+++|+++++||.+|..|+++++ +|+|||+||. ++....++++
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~-------~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e 317 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDA-------KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGE 317 (656)
T ss_dssp SCEEEECTTSCEEEECSSST-------TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEE
T ss_pred cccccCCCCCCEEEeCCCCC-------CceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccce
Confidence 444554 5899999999753 3799999999999999999999999999999 9999999994 5444566666
Q ss_pred eEeeeeeccccccCceEec-----cCCCCCcCceeEEEECCEEEEEecCCCC
Q 020682 248 HWSIAVKDGKALEKAWRTE-----IPIPRGGPHRACFVFNDRLFVVGGQEGD 294 (322)
Q Consensus 248 ~~~~~v~~~~~~~~~W~~~-----~~~p~~~~~~~~~~~~~~lyv~GG~~~~ 294 (322)
+|| |.+++|+.+ .+++..+.. +++..++++|++||.++.
T Consensus 318 ~yd-------~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~Gg~~g~ 361 (656)
T 1k3i_A 318 VYS-------PSSKTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLFGWKKGS 361 (656)
T ss_dssp EEE-------TTTTEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEEECGGGC
T ss_pred EeC-------CCCCcceeCCCcccccccccccc-ceeecCCceEEEECCCCc
Confidence 666 669999997 567777654 667789999999998765
No 19
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.29 E-value=0.0062 Score=52.98 Aligned_cols=100 Identities=16% Similarity=0.141 Sum_probs=72.8
Q ss_pred ccEEEEECCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEE
Q 020682 121 DGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTF 200 (322)
Q Consensus 121 ~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~ 200 (322)
-+.+...++.||+-.|..+. +.+.++|+++.+=....+++. ...+.+++..+++||+.... .+.++
T Consensus 23 tqGL~~~~~~LyestG~~g~----S~v~~vD~~tgkv~~~~~l~~--~~fgeGi~~~~~~ly~ltw~--------~~~v~ 88 (243)
T 3mbr_X 23 TEGLFYLRGHLYESTGETGR----SSVRKVDLETGRILQRAEVPP--PYFGAGIVAWRDRLIQLTWR--------NHEGF 88 (243)
T ss_dssp EEEEEEETTEEEEEECCTTS----CEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTEEEEEESS--------SSEEE
T ss_pred cccEEEECCEEEEECCCCCC----ceEEEEECCCCCEEEEEeCCC--CcceeEEEEeCCEEEEEEee--------CCEEE
Confidence 44667778999999996544 368899999988766555554 44677888899999998643 47899
Q ss_pred EEeCCCCcEEEcCCCCCCCCCcEEEEECCEEEEEec
Q 020682 201 VLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGG 236 (322)
Q Consensus 201 ~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG 236 (322)
+||++|.+-.. .++.+..+.+++..+++||+--|
T Consensus 89 v~D~~tl~~~~--ti~~~~~Gwglt~dg~~L~vSdg 122 (243)
T 3mbr_X 89 VYDLATLTPRA--RFRYPGEGWALTSDDSHLYMSDG 122 (243)
T ss_dssp EEETTTTEEEE--EEECSSCCCEEEECSSCEEEECS
T ss_pred EEECCcCcEEE--EEeCCCCceEEeeCCCEEEEECC
Confidence 99998876433 22333356677776778998765
No 20
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.14 E-value=0.0031 Score=54.93 Aligned_cols=119 Identities=18% Similarity=0.188 Sum_probs=82.8
Q ss_pred CCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCC
Q 020682 163 MPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRH 242 (322)
Q Consensus 163 ~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~ 242 (322)
.|++..-.-.+..+.++.+|+-.|..+ .+.+..+|+++++=..--+++..-++.+++..+++||+.....
T Consensus 15 ~phd~~~ftqGL~~~~~~LyestG~~g------~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~---- 84 (243)
T 3mbr_X 15 YPHDTTAFTEGLFYLRGHLYESTGETG------RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN---- 84 (243)
T ss_dssp EECCTTCCEEEEEEETTEEEEEECCTT------SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS----
T ss_pred cCCCCccccccEEEECCEEEEECCCCC------CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC----
Confidence 344324456678888999999998754 3789999999998776666766667778889999999986543
Q ss_pred CCCcceEeeeeeccccccCceEeccCCCCCcCceeEEEECCEEEEEecCCCCCCCCCCC
Q 020682 243 TPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGS 301 (322)
Q Consensus 243 ~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~p~~ 301 (322)
+.+..|| + ..-+.+..++.+..+.+++.-+++||+--|.+...++||.+
T Consensus 85 -~~v~v~D-------~--~tl~~~~ti~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t 133 (243)
T 3mbr_X 85 -HEGFVYD-------L--ATLTPRARFRYPGEGWALTSDDSHLYMSDGTAVIRKLDPDT 133 (243)
T ss_dssp -SEEEEEE-------T--TTTEEEEEEECSSCCCEEEECSSCEEEECSSSEEEEECTTT
T ss_pred -CEEEEEE-------C--CcCcEEEEEeCCCCceEEeeCCCEEEEECCCCeEEEEeCCC
Confidence 2345555 2 23334433333344557777788899999866666788876
No 21
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.87 E-value=0.009 Score=52.50 Aligned_cols=99 Identities=12% Similarity=0.045 Sum_probs=69.1
Q ss_pred cEEEEECCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEE
Q 020682 122 GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFV 201 (322)
Q Consensus 122 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~ 201 (322)
.++...++.||+-.|..+. +.+.++|+++.+=....+++. .-.+.+++..+++||+.... .+.+++
T Consensus 46 qGL~~~~~~LyestG~~g~----S~v~~vD~~Tgkv~~~~~l~~--~~FgeGit~~g~~ly~ltw~--------~~~v~v 111 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNGR----SSIRKVDIESGKTLQQIELGK--RYFGEGISDWKDKIVGLTWK--------NGLGFV 111 (262)
T ss_dssp EEEEEETTEEEEEEEETTE----EEEEEECTTTCCEEEEEECCT--TCCEEEEEEETTEEEEEESS--------SSEEEE
T ss_pred ceEEEECCEEEEECCCCCC----ceEEEEECCCCcEEEEEecCC--ccceeEEEEeCCEEEEEEee--------CCEEEE
Confidence 4455558999999996543 368899999988655444543 34667788899999998653 378999
Q ss_pred EeCCCCcEEEcCCCCCCCCCcEEEEECCEEEEEec
Q 020682 202 LDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGG 236 (322)
Q Consensus 202 yd~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG 236 (322)
||++|.+-.. .++.+-.+.+++..+++||+.-|
T Consensus 112 ~D~~t~~~~~--ti~~~~eG~glt~dg~~L~~SdG 144 (262)
T 3nol_A 112 WNIRNLRQVR--SFNYDGEGWGLTHNDQYLIMSDG 144 (262)
T ss_dssp EETTTCCEEE--EEECSSCCCCEEECSSCEEECCS
T ss_pred EECccCcEEE--EEECCCCceEEecCCCEEEEECC
Confidence 9999877432 22223355566666677888755
No 22
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.53 E-value=0.0062 Score=53.51 Aligned_cols=112 Identities=15% Similarity=0.095 Sum_probs=75.6
Q ss_pred ceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceE
Q 020682 170 SHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHW 249 (322)
Q Consensus 170 ~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~ 249 (322)
+..+..+.++.+|+..|..+ .+.+..+|++|.+=..--+++..-++.+++..+++||+..... +.+..|
T Consensus 44 ftqGL~~~~~~LyestG~~g------~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~-----~~v~v~ 112 (262)
T 3nol_A 44 FTEGFFYRNGYFYESTGLNG------RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN-----GLGFVW 112 (262)
T ss_dssp EEEEEEEETTEEEEEEEETT------EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-----SEEEEE
T ss_pred ccceEEEECCEEEEECCCCC------CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC-----CEEEEE
Confidence 44566777999999999754 3688999999998665555655555667888999999986542 234555
Q ss_pred eeeeeccccccCceEeccCCCCCcCceeEEEECCEEEEEecCCCCCCCCCCC
Q 020682 250 SIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGS 301 (322)
Q Consensus 250 ~~~v~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~p~~ 301 (322)
| +++.+ .+..++-+..+.+++.-+++||+.-|.+...++||.+
T Consensus 113 D-------~~t~~--~~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T 155 (262)
T 3nol_A 113 N-------IRNLR--QVRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPES 155 (262)
T ss_dssp E-------TTTCC--EEEEEECSSCCCCEEECSSCEEECCSSSEEEEECTTT
T ss_pred E-------CccCc--EEEEEECCCCceEEecCCCEEEEECCCCeEEEEcCCC
Confidence 5 33433 3333333334447777788899998855556678876
No 23
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.33 E-value=0.036 Score=48.71 Aligned_cols=96 Identities=14% Similarity=0.112 Sum_probs=67.6
Q ss_pred cEEEEECCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEE
Q 020682 122 GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFV 201 (322)
Q Consensus 122 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~ 201 (322)
.++...++.||+..|..+ .+.++|+++.+=.... ++. .-.+.+++..+++||+.... .+.+++
T Consensus 58 qGL~~~~~~Ly~stG~~g------~v~~iD~~Tgkv~~~~-l~~--~~FgeGit~~g~~Ly~ltw~--------~~~v~V 120 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQG------TLRQLSLESAQPVWME-RLG--NIFAEGLASDGERLYQLTWT--------EGLLFT 120 (268)
T ss_dssp EEEEEETTEEEEEETTTT------EEEECCSSCSSCSEEE-ECT--TCCEEEEEECSSCEEEEESS--------SCEEEE
T ss_pred ceEEEECCEEEEEcCCCC------EEEEEECCCCcEEeEE-CCC--CcceeEEEEeCCEEEEEEcc--------CCEEEE
Confidence 455666899999999542 3888999987754433 443 34566788899999998653 378999
Q ss_pred EeCCCCcEEEcCCCCCCCCCcEEEEECCEEEEEec
Q 020682 202 LDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGG 236 (322)
Q Consensus 202 yd~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG 236 (322)
||++|.+-..- ++.+-.+.+++..+++||+.-|
T Consensus 121 ~D~~Tl~~~~t--i~~~~eGwGLt~Dg~~L~vSdG 153 (268)
T 3nok_A 121 WSGMPPQRERT--TRYSGEGWGLCYWNGKLVRSDG 153 (268)
T ss_dssp EETTTTEEEEE--EECSSCCCCEEEETTEEEEECS
T ss_pred EECCcCcEEEE--EeCCCceeEEecCCCEEEEECC
Confidence 99998764432 2223345677777888999865
No 24
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.05 E-value=0.25 Score=44.60 Aligned_cols=172 Identities=17% Similarity=0.190 Sum_probs=90.4
Q ss_pred hccccccCCC--CEEECCCCC-------CCCcccEEEEECCEEEEEeecCCCCCCcceeEEEECCCCc--eEECCCCCCC
Q 020682 98 TFADLPAPDL--EWEQMPSAP-------VPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKD 166 (322)
Q Consensus 98 ~~~~yd~~~~--~W~~~~~~p-------~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~p 166 (322)
.+..||..+. .|+.-.... ........+..++.||+.... ..++++|.++.+ |+.-....
T Consensus 64 ~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~-------g~l~a~d~~tG~~~W~~~~~~~-- 134 (376)
T 3q7m_A 64 LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK-------AQVYALNTSDGTVAWQTKVAGE-- 134 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT-------SEEEEEETTTCCEEEEEECSSC--
T ss_pred eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC-------CEEEEEECCCCCEEEEEeCCCc--
Confidence 5678887655 576543221 112233445668899986532 368999988654 76532211
Q ss_pred CCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCCc--EEEcCCCCC--CCCCcEEEEECCEEEEEeccCCCCC
Q 020682 167 MAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK--WDSIPPLPS--PRYSPATQLWRGRLHVMGGSKENRH 242 (322)
Q Consensus 167 ~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~--~r~~~~~~~~~~~Lyv~GG~~~~~~ 242 (322)
.....++.++.||+..+ ...++.||+++.+ |+.-...+. .+.....+..++.+|+ |..++
T Consensus 135 ---~~~~p~~~~~~v~v~~~---------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~-g~~~g--- 198 (376)
T 3q7m_A 135 ---ALSRPVVSDGLVLIHTS---------NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVV-GGDNG--- 198 (376)
T ss_dssp ---CCSCCEEETTEEEEECT---------TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEE-CCTTT---
T ss_pred ---eEcCCEEECCEEEEEcC---------CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEE-EcCCC---
Confidence 11223456888888543 2679999998875 876543222 1223344556787776 32211
Q ss_pred CCCcceEeeeeeccccccCceEeccCCCCCc--------CceeEEEECCEEEEEecCCCCCCCCCCC
Q 020682 243 TPGLEHWSIAVKDGKALEKAWRTEIPIPRGG--------PHRACFVFNDRLFVVGGQEGDFMAKPGS 301 (322)
Q Consensus 243 ~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~~--------~~~~~~~~~~~lyv~GG~~~~~~~~p~~ 301 (322)
.+..++.+ ..+..|+.....|... .....++.++.+|+.+.......+++.+
T Consensus 199 --~l~~~d~~-----tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~t 258 (376)
T 3q7m_A 199 --RVSAVLME-----QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRS 258 (376)
T ss_dssp --EEEEEETT-----TCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTT
T ss_pred --EEEEEECC-----CCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCC
Confidence 23344321 3345677654333211 1123456678888766433333455533
No 25
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.01 E-value=0.28 Score=43.75 Aligned_cols=120 Identities=11% Similarity=0.042 Sum_probs=72.8
Q ss_pred hhccccccCCCCEEEC-----CCCCCCCcccEEEEECCEEEEEeecCCCCCCcceeEEEECCCCceE-ECCCCCCCCCCc
Q 020682 97 ATFADLPAPDLEWEQM-----PSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWV-DRFDMPKDMAHS 170 (322)
Q Consensus 97 ~~~~~yd~~~~~W~~~-----~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~-~~~~~~~p~~r~ 170 (322)
.++..+|+.+.+...- ...+.......++..++++|+.... .+.+.++|+++.+-. .++... .
T Consensus 17 ~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~------~~~v~viD~~t~~~~~~i~~~~-----~ 85 (328)
T 3dsm_A 17 ATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN------SHVIFAIDINTFKEVGRITGFT-----S 85 (328)
T ss_dssp BEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG------GTEEEEEETTTCCEEEEEECCS-----S
T ss_pred ceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC------CCEEEEEECcccEEEEEcCCCC-----C
Confidence 3567778877766532 1122333345566789999999763 146999999987753 332222 2
Q ss_pred eeEEEE-eCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCC----CCCCcEEEEECCEEEEEe
Q 020682 171 HLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPS----PRYSPATQLWRGRLHVMG 235 (322)
Q Consensus 171 ~~~~~~-~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~----~r~~~~~~~~~~~Lyv~G 235 (322)
...+++ .++++|+.... ...+.++|+++.+-...-+... ...-..++..+++||+..
T Consensus 86 p~~i~~~~~g~lyv~~~~--------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~ 147 (328)
T 3dsm_A 86 PRYIHFLSDEKAYVTQIW--------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNC 147 (328)
T ss_dssp EEEEEEEETTEEEEEEBS--------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEE
T ss_pred CcEEEEeCCCeEEEEECC--------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEc
Confidence 334555 67899998742 3789999999987543211111 002224455788999884
No 26
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.91 E-value=0.21 Score=43.90 Aligned_cols=99 Identities=13% Similarity=0.017 Sum_probs=64.1
Q ss_pred cEEEEEC-CEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEE
Q 020682 122 GAAIQIK-NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTF 200 (322)
Q Consensus 122 ~~~~~~~-~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~ 200 (322)
+.+...+ +.||+..|..+. +.+.++|+++.+=...-+++. .....+++..+++||+..-. .+.++
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~~----s~v~~iD~~tg~v~~~i~l~~--~~fgeGi~~~g~~lyv~t~~--------~~~v~ 89 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYGR----SSVRQVALQTGKVENIHKMDD--SYFGEGLTLLNEKLYQVVWL--------KNIGF 89 (266)
T ss_dssp EEEEECSTTEEEEEECSTTT----CEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTEEEEEETT--------CSEEE
T ss_pred ccEEEeCCCeEEEECCCCCC----CEEEEEECCCCCEEEEEecCC--CcceEEEEEeCCEEEEEEec--------CCEEE
Confidence 4555555 799999874322 469999999888655333432 33556788889999998642 37899
Q ss_pred EEeCCCCcEEEcCCCCCC-CCCcEEEEECCEEEEEec
Q 020682 201 VLDSETRKWDSIPPLPSP-RYSPATQLWRGRLHVMGG 236 (322)
Q Consensus 201 ~yd~~t~~W~~~~~~p~~-r~~~~~~~~~~~Lyv~GG 236 (322)
+||++|.+=.. .+|.+ ..+.+++.-+++||+.-|
T Consensus 90 viD~~t~~v~~--~i~~g~~~g~glt~Dg~~l~vs~g 124 (266)
T 2iwa_A 90 IYDRRTLSNIK--NFTHQMKDGWGLATDGKILYGSDG 124 (266)
T ss_dssp EEETTTTEEEE--EEECCSSSCCEEEECSSSEEEECS
T ss_pred EEECCCCcEEE--EEECCCCCeEEEEECCCEEEEECC
Confidence 99999865322 22222 234455555667998754
No 27
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.86 E-value=0.038 Score=48.66 Aligned_cols=111 Identities=13% Similarity=0.057 Sum_probs=70.3
Q ss_pred eeEEEEeC-CEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceE
Q 020682 171 HLGVVSDG-RYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHW 249 (322)
Q Consensus 171 ~~~~~~~~-~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~ 249 (322)
-+++++.+ +.+|+..|..+ .+.+.++|++|++=...-+++......+++..+++||+..-. .+.+..+
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~------~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~-----~~~v~vi 91 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYG------RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL-----KNIGFIY 91 (266)
T ss_dssp EEEEEECSTTEEEEEECSTT------TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT-----CSEEEEE
T ss_pred cccEEEeCCCeEEEECCCCC------CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec-----CCEEEEE
Confidence 46777775 89999887432 378999999999865544444444555677888999998543 2235555
Q ss_pred eeeeeccccccCceEeccCCCCC-cCceeEEEECCEEEEEecCCCCCCCCCCC
Q 020682 250 SIAVKDGKALEKAWRTEIPIPRG-GPHRACFVFNDRLFVVGGQEGDFMAKPGS 301 (322)
Q Consensus 250 ~~~v~~~~~~~~~W~~~~~~p~~-~~~~~~~~~~~~lyv~GG~~~~~~~~p~~ 301 (322)
| +.+. +.+..+|.+ ..+.+++.-++++|+..|.+...+++|.+
T Consensus 92 D-------~~t~--~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t 135 (266)
T 2iwa_A 92 D-------RRTL--SNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHT 135 (266)
T ss_dssp E-------TTTT--EEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTT
T ss_pred E-------CCCC--cEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCC
Confidence 5 2232 333323222 33335666677899988755555677766
No 28
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=95.81 E-value=0.37 Score=42.91 Aligned_cols=181 Identities=12% Similarity=0.043 Sum_probs=92.2
Q ss_pred hhccccccCCCCEEECCCCCCC----CcccEEEEECCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCcee
Q 020682 97 ATFADLPAPDLEWEQMPSAPVP----RLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHL 172 (322)
Q Consensus 97 ~~~~~yd~~~~~W~~~~~~p~~----r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~ 172 (322)
..+..+|+.+.+-...-+.... ..-..++..+++|||..- . ..+.+.++|+++.+....-+... .-.
T Consensus 105 ~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~-~----~~~~v~viD~~t~~~~~~i~~g~----~p~ 175 (328)
T 3dsm_A 105 YRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCW-S----YQNRILKIDTETDKVVDELTIGI----QPT 175 (328)
T ss_dssp SEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEEC-T----TCCEEEEEETTTTEEEEEEECSS----CBC
T ss_pred CeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcC-C----CCCEEEEEECCCCeEEEEEEcCC----Ccc
Confidence 4577888877654321111110 022234447899999852 0 12469999999887654222211 112
Q ss_pred EEEEe-CCEEEEEecccCCC--CCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcc
Q 020682 173 GVVSD-GRYIYIVSGQYGPQ--CRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLE 247 (322)
Q Consensus 173 ~~~~~-~~~Iyv~GG~~~~~--~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~ 247 (322)
.+++. ++++|+........ .......+.++|+++.+....-.++....-..++.- ++.||+..+ .+.
T Consensus 176 ~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--------~v~ 247 (328)
T 3dsm_A 176 SLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--------DIW 247 (328)
T ss_dssp CCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--------SEE
T ss_pred ceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--------EEE
Confidence 33333 68888875322111 000137899999999886643333332222344444 456888643 244
Q ss_pred eEeeeeeccccccCceEeccCCCC-CcCceeEEE--ECCEEEEEe----cCC-CCCCCCCCC
Q 020682 248 HWSIAVKDGKALEKAWRTEIPIPR-GGPHRACFV--FNDRLFVVG----GQE-GDFMAKPGS 301 (322)
Q Consensus 248 ~~~~~v~~~~~~~~~W~~~~~~p~-~~~~~~~~~--~~~~lyv~G----G~~-~~~~~~p~~ 301 (322)
.++ +.+.+.....-++. ...-.++++ .+++|||.. ..+ ...+|++..
T Consensus 248 ~~d-------~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g 302 (328)
T 3dsm_A 248 RMP-------VEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQG 302 (328)
T ss_dssp EEE-------TTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTC
T ss_pred EEE-------CCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCC
Confidence 444 44554422222222 122223444 378899997 222 234566663
No 29
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.34 E-value=0.97 Score=40.59 Aligned_cols=169 Identities=12% Similarity=0.184 Sum_probs=89.7
Q ss_pred hccccccCCC--CEEECCCCCCCCcccEEEEECCEEEEEeecCCCCCCcceeEEEECCCCc--eEECCCCCCCCCCceeE
Q 020682 98 TFADLPAPDL--EWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDMAHSHLG 173 (322)
Q Consensus 98 ~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~p~~r~~~~ 173 (322)
.+..+|..+. .|+.-.+-. .....+..++.||+..+. ..++.||+++.+ |+.-...+....+....
T Consensus 114 ~l~a~d~~tG~~~W~~~~~~~---~~~~p~~~~~~v~v~~~~-------g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~ 183 (376)
T 3q7m_A 114 QVYALNTSDGTVAWQTKVAGE---ALSRPVVSDGLVLIHTSN-------GQLQALNEADGAVKWTVNLDMPSLSLRGESA 183 (376)
T ss_dssp EEEEEETTTCCEEEEEECSSC---CCSCCEEETTEEEEECTT-------SEEEEEETTTCCEEEEEECCC-----CCCCC
T ss_pred EEEEEECCCCCEEEEEeCCCc---eEcCCEEECCEEEEEcCC-------CeEEEEECCCCcEEEEEeCCCCceeecCCCC
Confidence 4777887655 476543211 122224458888885431 358999987654 87643322110122234
Q ss_pred EEEeCCEEEEEecccCCCCCCCCceEEEEeCCCCc--EEEcCCCCCCC--------CCcEEEEECCEEEEEeccCCCCCC
Q 020682 174 VVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK--WDSIPPLPSPR--------YSPATQLWRGRLHVMGGSKENRHT 243 (322)
Q Consensus 174 ~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~~r--------~~~~~~~~~~~Lyv~GG~~~~~~~ 243 (322)
.++.++.||+... ...+..||+++.+ |+.-...|... .....++.++.||+.+. +
T Consensus 184 ~~~~~~~v~~g~~---------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~-~----- 248 (376)
T 3q7m_A 184 PTTAFGAAVVGGD---------NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY-N----- 248 (376)
T ss_dssp CEEETTEEEECCT---------TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT-T-----
T ss_pred cEEECCEEEEEcC---------CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec-C-----
Confidence 4556888877321 2578899988764 77653322211 12334566888887642 1
Q ss_pred CCcceEeeeeeccccccCceEeccCCCCCcCceeEEEECCEEEEEecCCCCCCCCCCC
Q 020682 244 PGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGS 301 (322)
Q Consensus 244 ~~~~~~~~~v~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~p~~ 301 (322)
..+..++.+ ..+..|+.... . ....++.++.||+.........+++.+
T Consensus 249 g~l~~~d~~-----tG~~~w~~~~~--~---~~~~~~~~~~l~~~~~~g~l~~~d~~t 296 (376)
T 3q7m_A 249 GNLTALDLR-----SGQIMWKRELG--S---VNDFIVDGNRIYLVDQNDRVMALTIDG 296 (376)
T ss_dssp SCEEEEETT-----TCCEEEEECCC--C---EEEEEEETTEEEEEETTCCEEEEETTT
T ss_pred cEEEEEECC-----CCcEEeeccCC--C---CCCceEECCEEEEEcCCCeEEEEECCC
Confidence 124444432 23445765422 1 124566788888887544444455443
No 30
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.25 E-value=0.052 Score=47.70 Aligned_cols=109 Identities=15% Similarity=0.080 Sum_probs=72.1
Q ss_pred ceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceE
Q 020682 170 SHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHW 249 (322)
Q Consensus 170 ~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~ 249 (322)
+..+..+.++.||+..|.. ..+..+|++|.+=..-- ++..-++.+++..+++||+..... +.+..|
T Consensus 56 ftqGL~~~~~~Ly~stG~~--------g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~-----~~v~V~ 121 (268)
T 3nok_A 56 FTQGLVFHQGHFFESTGHQ--------GTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTE-----GLLFTW 121 (268)
T ss_dssp CEEEEEEETTEEEEEETTT--------TEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSS-----CEEEEE
T ss_pred ccceEEEECCEEEEEcCCC--------CEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccC-----CEEEEE
Confidence 4467777899999999863 34889999988743323 555445566888899999986542 234555
Q ss_pred eeeeeccccccCceEeccCCCCCcCceeEEEECCEEEEEecCCCCCCCCCCC
Q 020682 250 SIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGDFMAKPGS 301 (322)
Q Consensus 250 ~~~v~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~~~~~p~~ 301 (322)
| +++.+ .+..++-...+.+++.-+++||+.-|.+...++||.+
T Consensus 122 D-------~~Tl~--~~~ti~~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T 164 (268)
T 3nok_A 122 S-------GMPPQ--RERTTRYSGEGWGLCYWNGKLVRSDGGTMLTFHEPDG 164 (268)
T ss_dssp E-------TTTTE--EEEEEECSSCCCCEEEETTEEEEECSSSEEEEECTTT
T ss_pred E-------CCcCc--EEEEEeCCCceeEEecCCCEEEEECCCCEEEEEcCCC
Confidence 5 22333 3333332333457778899999999866566778876
No 31
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.21 E-value=0.16 Score=47.14 Aligned_cols=196 Identities=10% Similarity=0.008 Sum_probs=92.1
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEEE--CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVV 175 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~ 175 (322)
.+..+|..+.+...+...+. .....+.. +.+|++.+..++. ..++++|+.+.+...+..... .....+
T Consensus 204 ~i~~~d~~tg~~~~l~~~~~--~~~~~~~spdg~~la~~~~~~g~----~~i~~~d~~~~~~~~l~~~~~----~~~~~~ 273 (415)
T 2hqs_A 204 ALVIQTLANGAVRQVASFPR--HNGAPAFSPDGSKLAFALSKTGS----LNLYVMDLASGQIRQVTDGRS----NNTEPT 273 (415)
T ss_dssp EEEEEETTTCCEEEEECCSS--CEEEEEECTTSSEEEEEECTTSS----CEEEEEETTTCCEEECCCCSS----CEEEEE
T ss_pred EEEEEECCCCcEEEeecCCC--cccCEEEcCCCCEEEEEEecCCC----ceEEEEECCCCCEEeCcCCCC----cccceE
Confidence 46667776666655543322 11111111 3445545543322 359999999887766544332 122333
Q ss_pred Ee-CCE-EEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEE-EECCEEEEEeccCCCCCCCCcceEeee
Q 020682 176 SD-GRY-IYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQ-LWRGRLHVMGGSKENRHTPGLEHWSIA 252 (322)
Q Consensus 176 ~~-~~~-Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~-~~~~~Lyv~GG~~~~~~~~~~~~~~~~ 252 (322)
.. +++ |++.+..++ ...++.+|..+.+-..+... .......+ .-+++.+++++.... ...+..|+
T Consensus 274 ~spdg~~l~~~s~~~g------~~~i~~~d~~~~~~~~l~~~--~~~~~~~~~spdG~~l~~~~~~~g--~~~i~~~d-- 341 (415)
T 2hqs_A 274 WFPDSQNLAFTSDQAG------RPQVYKVNINGGAPQRITWE--GSQNQDADVSSDGKFMVMVSSNGG--QQHIAKQD-- 341 (415)
T ss_dssp ECTTSSEEEEEECTTS------SCEEEEEETTSSCCEECCCS--SSEEEEEEECTTSSEEEEEEECSS--CEEEEEEE--
T ss_pred ECCCCCEEEEEECCCC------CcEEEEEECCCCCEEEEecC--CCcccCeEECCCCCEEEEEECcCC--ceEEEEEE--
Confidence 32 444 544432211 35899999988775554321 11111111 225554555443211 12244444
Q ss_pred eeccccccCceEeccCCCCCcCceeEEEECCEEEEEecCCCC----CCCCCCCCeeeeeEeeceeEeeeeeeeC
Q 020682 253 VKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGD----FMAKPGSPIFKCSRRHEFMVMFICWMMK 322 (322)
Q Consensus 253 v~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~----~~~~p~~~~~~~~~~~e~~~~~~~~~~~ 322 (322)
..+.+...+..-. ........-+++.+++++.++. ..++...........++--..+++|-.|
T Consensus 342 -----~~~~~~~~l~~~~--~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 342 -----LATGGVQVLSSTF--LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp -----TTTCCEEECCCSS--SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCC
T ss_pred -----CCCCCEEEecCCC--CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCCccccc
Confidence 3466665543322 1111222235666666655442 2344444333333344444578888543
No 32
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.14 E-value=0.082 Score=47.70 Aligned_cols=99 Identities=16% Similarity=0.196 Sum_probs=54.2
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
+..||+.++.+ ..+.++|..+.+-........ .-.+++.. ++.||+.+.. -..+.+||+.
T Consensus 43 g~~l~~~~~~d------~~i~v~d~~~~~~~~~~~~~~----~v~~~~~spdg~~l~~~~~~--------~~~v~v~d~~ 104 (391)
T 1l0q_A 43 GTKVYVANAHS------NDVSIIDTATNNVIATVPAGS----SPQGVAVSPDGKQVYVTNMA--------SSTLSVIDTT 104 (391)
T ss_dssp SSEEEEEEGGG------TEEEEEETTTTEEEEEEECSS----SEEEEEECTTSSEEEEEETT--------TTEEEEEETT
T ss_pred CCEEEEECCCC------CeEEEEECCCCeEEEEEECCC----CccceEECCCCCEEEEEECC--------CCEEEEEECC
Confidence 45677777543 368999998776544322221 22344443 5567776542 2678999999
Q ss_pred CCcEEEcCCCCCCCCCcEEEEE-CC-EEEEEeccCCCCCCCCcceEee
Q 020682 206 TRKWDSIPPLPSPRYSPATQLW-RG-RLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 206 t~~W~~~~~~p~~r~~~~~~~~-~~-~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
+++-...-.... .-..++.. ++ .||+.++.++ .+..|++
T Consensus 105 ~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~~-----~v~~~d~ 145 (391)
T 1l0q_A 105 SNTVAGTVKTGK--SPLGLALSPDGKKLYVTNNGDK-----TVSVINT 145 (391)
T ss_dssp TTEEEEEEECSS--SEEEEEECTTSSEEEEEETTTT-----EEEEEET
T ss_pred CCeEEEEEeCCC--CcceEEECCCCCEEEEEeCCCC-----EEEEEEC
Confidence 887554422211 11223322 33 5777765432 3556654
No 33
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.69 E-value=0.41 Score=42.35 Aligned_cols=172 Identities=10% Similarity=0.074 Sum_probs=83.1
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEEE--C--CEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--K--NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLG 173 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~ 173 (322)
.+..||....++..+..+.........+.. . +.+++.|+.+ ..+.+||..+.+|..+..+... ...-.+
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~-~~~v~~ 106 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKEENGRWSQIAVHAVH-SASVNS 106 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------SCEEEEEEETTEEEEEEEECCC-SSCEEE
T ss_pred cEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC------CEEEEEEcCCCceeEeeeecCC-CcceEE
Confidence 345555544444444333322222222233 2 5667777754 2478889998887665544421 122233
Q ss_pred EEEe-C--CEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEE---------------CCEEEEEe
Q 020682 174 VVSD-G--RYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW---------------RGRLHVMG 235 (322)
Q Consensus 174 ~~~~-~--~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~---------------~~~Lyv~G 235 (322)
++.. + +.+++.|+.+ ..+..||..+..-...-.+.........+.+ ++.+++.|
T Consensus 107 ~~~~~~~~~~~l~~~~~d--------~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 178 (379)
T 3jrp_A 107 VQWAPHEYGPLLLVASSD--------GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTG 178 (379)
T ss_dssp EEECCGGGCSEEEEEETT--------SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEE
T ss_pred EEeCCCCCCCEEEEecCC--------CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEE
Confidence 4443 2 4566666642 5677888876531111000000111111222 46777788
Q ss_pred ccCCCCCCCCcceEeeeeeccccccCceEeccCCCCCcCceeEEE--EC---CEEEEEecCCCC
Q 020682 236 GSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFV--FN---DRLFVVGGQEGD 294 (322)
Q Consensus 236 G~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~~~~~~~~~--~~---~~lyv~GG~~~~ 294 (322)
+.++ .+..|++. .....+..+..+.........+. -+ +++++.|+.++.
T Consensus 179 ~~dg-----~i~i~d~~-----~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~ 232 (379)
T 3jrp_A 179 GADN-----LVKIWKYN-----SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT 232 (379)
T ss_dssp ETTS-----CEEEEEEE-----TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC
T ss_pred eCCC-----eEEEEEec-----CCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCE
Confidence 7654 36677754 22334544433332111112222 23 688888887765
No 34
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.23 E-value=0.14 Score=46.11 Aligned_cols=127 Identities=13% Similarity=0.085 Sum_probs=65.0
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEEE--CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVV 175 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~ 175 (322)
.+..+|..+.+-...-..+ ..-..++.. ++.||+.+..+ ..+.+||+.+.+-....... ....+++
T Consensus 55 ~i~v~d~~~~~~~~~~~~~--~~v~~~~~spdg~~l~~~~~~~------~~v~v~d~~~~~~~~~~~~~----~~~~~~~ 122 (391)
T 1l0q_A 55 DVSIIDTATNNVIATVPAG--SSPQGVAVSPDGKQVYVTNMAS------STLSVIDTTSNTVAGTVKTG----KSPLGLA 122 (391)
T ss_dssp EEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEECS----SSEEEEE
T ss_pred eEEEEECCCCeEEEEEECC--CCccceEECCCCCEEEEEECCC------CEEEEEECCCCeEEEEEeCC----CCcceEE
Confidence 5667777665443322221 111222222 45566665432 35899999987654432222 1223444
Q ss_pred Ee--CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEE-CC-EEEEEeccCCCCCCCCcceEee
Q 020682 176 SD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RG-RLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 176 ~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~-~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
.. +..||+.++. -..+..||+.+.+....-.... .-..++.. ++ .||+.++.+ ..+..|++
T Consensus 123 ~s~dg~~l~~~~~~--------~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~~~dg~~l~~~~~~~-----~~v~~~d~ 187 (391)
T 1l0q_A 123 LSPDGKKLYVTNNG--------DKTVSVINTVTKAVINTVSVGR--SPKGIAVTPDGTKVYVANFDS-----MSISVIDT 187 (391)
T ss_dssp ECTTSSEEEEEETT--------TTEEEEEETTTTEEEEEEECCS--SEEEEEECTTSSEEEEEETTT-----TEEEEEET
T ss_pred ECCCCCEEEEEeCC--------CCEEEEEECCCCcEEEEEecCC--CcceEEECCCCCEEEEEeCCC-----CEEEEEEC
Confidence 44 4567777653 2678999999887654422211 11222222 33 576766543 23556654
No 35
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=93.10 E-value=1 Score=39.65 Aligned_cols=105 Identities=13% Similarity=0.237 Sum_probs=58.9
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
++++++.|+.+ ..+.+||..+.++..+..+... ...-.+++.. ++.+++.|+.+ ..+..||..+
T Consensus 19 ~~~~l~~~~~d------~~v~i~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~~~~~d--------g~i~vwd~~~ 83 (372)
T 1k8k_C 19 DRTQIAICPNN------HEVHIYEKSGNKWVQVHELKEH-NGQVTGVDWAPDSNRIVTCGTD--------RNAYVWTLKG 83 (372)
T ss_dssp TSSEEEEECSS------SEEEEEEEETTEEEEEEEEECC-SSCEEEEEEETTTTEEEEEETT--------SCEEEEEEET
T ss_pred CCCEEEEEeCC------CEEEEEeCCCCcEEeeeeecCC-CCcccEEEEeCCCCEEEEEcCC--------CeEEEEECCC
Confidence 45566666642 3688899998877665544321 1222333443 55566666642 4677888888
Q ss_pred CcEEEcCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEeee
Q 020682 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIA 252 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~~ 252 (322)
.++.....+.........+.+ ++++++.|+.++ .+..|+++
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~i~d~~ 126 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSR-----VISICYFE 126 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTS-----SEEEEEEE
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCC-----EEEEEEec
Confidence 887655432222222223333 456777777543 36667654
No 36
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=92.71 E-value=2.5 Score=36.87 Aligned_cols=101 Identities=13% Similarity=0.126 Sum_probs=53.6
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCC-CCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKD-MAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p-~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~ 204 (322)
++.+|+... ...+.++|+.+.+-......... ......++++. ++.+|+.... ...+..||+
T Consensus 196 g~~l~~~~~-------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--------~~~v~~~d~ 260 (353)
T 3vgz_A 196 GKRLYTTNA-------DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK--------AAEVLVVDT 260 (353)
T ss_dssp TTEEEEECT-------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS--------SSEEEEEET
T ss_pred CCEEEEEcC-------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC--------CCEEEEEEC
Confidence 456777643 13688999987764332222110 02222334444 5678876531 378999999
Q ss_pred CCCcEEEcCCCCCCCCCcEEEEEC-CEEEEEeccCCCCCCCCcceEe
Q 020682 205 ETRKWDSIPPLPSPRYSPATQLWR-GRLHVMGGSKENRHTPGLEHWS 250 (322)
Q Consensus 205 ~t~~W~~~~~~p~~r~~~~~~~~~-~~Lyv~GG~~~~~~~~~~~~~~ 250 (322)
.+.+-...-+.+.+. ..+..-+ +.||+.+..+ ..+..|+
T Consensus 261 ~~~~~~~~~~~~~~~--~~~~s~dg~~l~v~~~~~-----~~v~~~d 300 (353)
T 3vgz_A 261 RNGNILAKVAAPESL--AVLFNPARNEAYVTHRQA-----GKVSVID 300 (353)
T ss_dssp TTCCEEEEEECSSCC--CEEEETTTTEEEEEETTT-----TEEEEEE
T ss_pred CCCcEEEEEEcCCCc--eEEECCCCCEEEEEECCC-----CeEEEEE
Confidence 988765443333331 2222223 4578765432 2355555
No 37
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=92.26 E-value=0.92 Score=45.41 Aligned_cols=95 Identities=8% Similarity=0.034 Sum_probs=51.9
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEEE--C--CEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--K--NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLG 173 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~ 173 (322)
.+..||....++..+..+......-..+.. . +..++.|+.+ ..+.+||..+.+|..+..+... ...-.+
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D------g~I~vwd~~~~~~~~~~~~~~h-~~~V~~ 104 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKEENGRWSQIAVHAVH-SASVNS 104 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT------SCEEEEEEETTEEEEEEEECCC-SSCEEE
T ss_pred cEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC------CeEEEEECCCCcccccccccCC-CCCeEE
Confidence 355566555555554444333222222333 2 5677777754 2478889888887665544321 122233
Q ss_pred EEEe-C--CEEEEEecccCCCCCCCCceEEEEeCCCC
Q 020682 174 VVSD-G--RYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 174 ~~~~-~--~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~ 207 (322)
++.. + +.+++.|+.+ ..+..||..+.
T Consensus 105 v~~sp~~~~~~l~sgs~d--------g~I~vwdl~~~ 133 (753)
T 3jro_A 105 VQWAPHEYGPLLLVASSD--------GKVSVVEFKEN 133 (753)
T ss_dssp EEECCGGGCSEEEEEETT--------SEEEEEECCSS
T ss_pred EEECCCCCCCEEEEEeCC--------CcEEEEEeecC
Confidence 3333 3 5677777643 56778887765
No 38
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=91.99 E-value=1.4 Score=39.92 Aligned_cols=98 Identities=10% Similarity=0.010 Sum_probs=56.0
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEEE-CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCC---CCCCCceeE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMP---KDMAHSHLG 173 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~---~p~~r~~~~ 173 (322)
.++.+|+.+.+++.+..++.+....+++.. ++++++.++.+ ..+.++|+.+.+........ .+ ...-.+
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~------~~i~~~d~~~g~~~~~~~~~~~~~~-~~~v~~ 174 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLED------EGMDVLDINSGQTVRLSPPEKYKKK-LGFVET 174 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTTS------SSEEEEETTTCCEEEECCCHHHHTT-CCEEEE
T ss_pred EEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCCC------CeEEEEECCCCeEeeecCccccccc-CCceeE
Confidence 566677766666655444433322222222 67888877643 24899999987765533221 11 111222
Q ss_pred EEE-eCCEEEEEecccCCCCCCCCceEEEEeCCCCcEE
Q 020682 174 VVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWD 210 (322)
Q Consensus 174 ~~~-~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 210 (322)
++. .++.+|+.++.+ ..+..||+++.+-.
T Consensus 175 ~~~~~~~~~~~s~~~d--------~~v~~~d~~~~~~~ 204 (433)
T 3bws_A 175 ISIPEHNELWVSQMQA--------NAVHVFDLKTLAYK 204 (433)
T ss_dssp EEEGGGTEEEEEEGGG--------TEEEEEETTTCCEE
T ss_pred EEEcCCCEEEEEECCC--------CEEEEEECCCceEE
Confidence 333 367888887642 57889999876543
No 39
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=91.47 E-value=1.1 Score=38.80 Aligned_cols=102 Identities=9% Similarity=0.090 Sum_probs=52.5
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
+++.++.|+.+ ..+.+||..+.+......+... ...-.+++.. ++..++.|+.+ ..+..||..+
T Consensus 108 ~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d--------g~v~~~d~~~ 172 (337)
T 1gxr_A 108 DGCTLIVGGEA------STLSIWDLAAPTPRIKAELTSS-APACYALAISPDSKVCFSCCSD--------GNIAVWDLHN 172 (337)
T ss_dssp TSSEEEEEESS------SEEEEEECCCC--EEEEEEECS-SSCEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEEcCC------CcEEEEECCCCCcceeeecccC-CCceEEEEECCCCCEEEEEeCC--------CcEEEEeCCC
Confidence 45566666643 3588999988775443333221 1122333443 55566666642 5688899988
Q ss_pred CcEEEcCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEee
Q 020682 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
.+-...-.... .......+ ++++++.|+.++ .+..|++
T Consensus 173 ~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~dg-----~i~~~d~ 212 (337)
T 1gxr_A 173 QTLVRQFQGHT--DGASCIDISNDGTKLWTGGLDN-----TVRSWDL 212 (337)
T ss_dssp TEEEEEECCCS--SCEEEEEECTTSSEEEEEETTS-----EEEEEET
T ss_pred Cceeeeeeccc--CceEEEEECCCCCEEEEEecCC-----cEEEEEC
Confidence 76443322111 11222233 556677776543 3556654
No 40
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=91.01 E-value=1.7 Score=43.54 Aligned_cols=172 Identities=11% Similarity=0.051 Sum_probs=91.8
Q ss_pred hccccccCCCCEEECCCCCC-CC-ccc--EEEEE-CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCcee
Q 020682 98 TFADLPAPDLEWEQMPSAPV-PR-LDG--AAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHL 172 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~-~r-~~~--~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~ 172 (322)
-+..||+.+.+|+.....+. .. ... +++.- ++.|++.... .-+++||+.+++++.......-....-.
T Consensus 470 Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~-------~Gl~~~~~~~~~~~~~~~~~~l~~~~i~ 542 (781)
T 3v9f_A 470 GVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFG-------GGVGIYTPDMQLVRKFNQYEGFCSNTIN 542 (781)
T ss_dssp EEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESS-------SCEEEECTTCCEEEEECTTTTCSCSCEE
T ss_pred ceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcC-------CCEEEEeCCCCeEEEccCCCCCCCCeeE
Confidence 46678887777766543221 11 111 22222 4667765321 1278899999888875432110011223
Q ss_pred EEEEe-CCEEEEEecccCCCCCCCCceE-EEEeCCCCcEEEcC---CCCCCCCCcEEEEE-CCEEEEEeccCCCCCCCCc
Q 020682 173 GVVSD-GRYIYIVSGQYGPQCRGPTSRT-FVLDSETRKWDSIP---PLPSPRYSPATQLW-RGRLHVMGGSKENRHTPGL 246 (322)
Q Consensus 173 ~~~~~-~~~Iyv~GG~~~~~~~~~~~~v-~~yd~~t~~W~~~~---~~p~~r~~~~~~~~-~~~Lyv~GG~~~~~~~~~~ 246 (322)
+++.. ++.||+... .-+ ..||+++++++... .+|.... .+++.. +|.|++.+. + .+
T Consensus 543 ~i~~d~~g~lWi~T~----------~Glv~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~-~------Gl 604 (781)
T 3v9f_A 543 QIYRSSKGQMWLATG----------EGLVCFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN-T------GI 604 (781)
T ss_dssp EEEECTTSCEEEEET----------TEEEEESCTTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEECS-S------CE
T ss_pred EEEECCCCCEEEEEC----------CCceEEECCCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEcC-C------ce
Confidence 33333 577887532 334 78888888877654 2444332 344433 567887542 2 24
Q ss_pred ceEeeeeeccccccCceEecc---CCCCCcCc-eeEEEECCEEEEEecCCCCCCCCCCC
Q 020682 247 EHWSIAVKDGKALEKAWRTEI---PIPRGGPH-RACFVFNDRLFVVGGQEGDFMAKPGS 301 (322)
Q Consensus 247 ~~~~~~v~~~~~~~~~W~~~~---~~p~~~~~-~~~~~~~~~lyv~GG~~~~~~~~p~~ 301 (322)
.+|+ |.+.++.... .++...+. .+++...+.-+.|||.+|-..++|..
T Consensus 605 ~~~~-------~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~Gl~~f~p~~ 656 (781)
T 3v9f_A 605 SCYI-------TSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIYFGSINGLCFFNPDI 656 (781)
T ss_dssp EEEE-------TTTTEEEEECGGGTCCSSCEEEEEEEECTTSCEEEEETTEEEEECSCC
T ss_pred EEEE-------CCCCceEEecccCCccccccccCceEECCCCEEEEECCCceEEEChhh
Confidence 4454 5566665542 24444332 23444444556668888887787764
No 41
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=90.95 E-value=2.1 Score=39.14 Aligned_cols=136 Identities=17% Similarity=0.193 Sum_probs=66.7
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEEC-CCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDR-FDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~-~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
.+..++.|+.+ ..+.+||..+..-... ..+... ...-.++...++ .++.|+.+ ..+..||..+
T Consensus 222 ~~~~l~s~s~d------g~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~-~l~s~~~d--------g~i~vwd~~~ 285 (435)
T 1p22_A 222 NNGMMVTCSKD------RSIAVWDMASPTDITLRRVLVGH-RAAVNVVDFDDK-YIVSASGD--------RTIKVWNTST 285 (435)
T ss_dssp CTTEEEEEETT------SCEEEEECSSSSCCEEEEEECCC-SSCEEEEEEETT-EEEEEETT--------SEEEEEETTT
T ss_pred cCCEEEEeeCC------CcEEEEeCCCCCCceeeeEecCC-CCcEEEEEeCCC-EEEEEeCC--------CeEEEEECCc
Confidence 44556666643 2477788876542210 111110 112223333344 45555532 5788899887
Q ss_pred CcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccCCCCCcCceeEEEECCEEE
Q 020682 207 RKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLF 286 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~ly 286 (322)
.+-... +...........+++.+++.|+.++ .+..|++. +.. .+..+.........+..+++.+
T Consensus 286 ~~~~~~--~~~~~~~v~~~~~~~~~l~~g~~dg-----~i~iwd~~-------~~~--~~~~~~~h~~~v~~~~~~~~~l 349 (435)
T 1p22_A 286 CEFVRT--LNGHKRGIACLQYRDRLVVSGSSDN-----TIRLWDIE-------CGA--CLRVLEGHEELVRCIRFDNKRI 349 (435)
T ss_dssp CCEEEE--EECCSSCEEEEEEETTEEEEEETTS-----CEEEEETT-------TCC--EEEEECCCSSCEEEEECCSSEE
T ss_pred CcEEEE--EcCCCCcEEEEEeCCCEEEEEeCCC-----eEEEEECC-------CCC--EEEEEeCCcCcEEEEEecCCEE
Confidence 653322 1111122234455677777887644 36667643 222 1111111111223445588888
Q ss_pred EEecCCCCC
Q 020682 287 VVGGQEGDF 295 (322)
Q Consensus 287 v~GG~~~~~ 295 (322)
+.|+.++..
T Consensus 350 ~sg~~dg~i 358 (435)
T 1p22_A 350 VSGAYDGKI 358 (435)
T ss_dssp EEEETTSCE
T ss_pred EEEeCCCcE
Confidence 888887753
No 42
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=90.80 E-value=3.2 Score=34.62 Aligned_cols=102 Identities=8% Similarity=-0.062 Sum_probs=52.7
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEE-EECCEEEEEeecCCCCCCcceeEEEECCC-CceEECCCCCCCCCCceeEEE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAI-QIKNLFYVFAGYGSLDYVHSHVDVYNFTD-NKWVDRFDMPKDMAHSHLGVV 175 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~v~~yd~~~-~~W~~~~~~~~p~~r~~~~~~ 175 (322)
.+..+|..+.+...+...+. .-.+++ .-+++.+++++. ..++++|+.+ .+...+..... ...-..++
T Consensus 23 ~i~~~d~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~~-------~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~ 91 (297)
T 2ojh_A 23 SIEIFNIRTRKMRVVWQTPE--LFEAPNWSPDGKYLLLNSE-------GLLYRLSLAGDPSPEKVDTGFA--TICNNDHG 91 (297)
T ss_dssp EEEEEETTTTEEEEEEEESS--CCEEEEECTTSSEEEEEET-------TEEEEEESSSCCSCEECCCTTC--CCBCSCCE
T ss_pred eEEEEeCCCCceeeeccCCc--ceEeeEECCCCCEEEEEcC-------CeEEEEeCCCCCCceEeccccc--cccccceE
Confidence 55666666665544332211 111122 124555555542 3699999998 77766543332 11112223
Q ss_pred Ee-CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCC
Q 020682 176 SD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP 214 (322)
Q Consensus 176 ~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 214 (322)
.. +++.+++++..... ...++.+|..+..-..+..
T Consensus 92 ~spdg~~l~~~~~~~~~----~~~l~~~~~~~~~~~~~~~ 127 (297)
T 2ojh_A 92 ISPDGALYAISDKVEFG----KSAIYLLPSTGGTPRLMTK 127 (297)
T ss_dssp ECTTSSEEEEEECTTTS----SCEEEEEETTCCCCEECCS
T ss_pred ECCCCCEEEEEEeCCCC----cceEEEEECCCCceEEeec
Confidence 32 45455555432222 4789999988877666543
No 43
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=90.68 E-value=3.6 Score=37.19 Aligned_cols=98 Identities=13% Similarity=0.060 Sum_probs=52.9
Q ss_pred hccccccCCCCEEECCCCC---CCCcccEEEEE--CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCcee
Q 020682 98 TFADLPAPDLEWEQMPSAP---VPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHL 172 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p---~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~ 172 (322)
.+..+|..+.+.....+.+ .+......+.. ++++|+.++.+ ..+.+||+.+.+-....... ...-.
T Consensus 145 ~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d------~~v~~~d~~~~~~~~~~~~~---~~~~~ 215 (433)
T 3bws_A 145 GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA------NAVHVFDLKTLAYKATVDLT---GKWSK 215 (433)
T ss_dssp SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG------TEEEEEETTTCCEEEEEECS---SSSEE
T ss_pred eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC------CEEEEEECCCceEEEEEcCC---CCCee
Confidence 3666676666554432221 11111122233 67888887743 36889999876543321111 11223
Q ss_pred EEEEe--CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEc
Q 020682 173 GVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSI 212 (322)
Q Consensus 173 ~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~ 212 (322)
+++.. ++.+|+.++. -..+..||+.+.+....
T Consensus 216 ~~~~~~~~~~l~~~~~~--------~~~i~~~d~~~~~~~~~ 249 (433)
T 3bws_A 216 ILLYDPIRDLVYCSNWI--------SEDISVIDRKTKLEIRK 249 (433)
T ss_dssp EEEEETTTTEEEEEETT--------TTEEEEEETTTTEEEEE
T ss_pred EEEEcCCCCEEEEEecC--------CCcEEEEECCCCcEEEE
Confidence 34443 5677777653 25788999988876544
No 44
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=90.45 E-value=6.5 Score=34.07 Aligned_cols=71 Identities=8% Similarity=0.016 Sum_probs=40.0
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEE--eCCEEEEEecccCCCCCCCCceEEEEeCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~--~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
++.+|+.........-...++++|+.+.+-....+... + ..++++ .++.+|+.++. ...+..||++
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~---~-~~~~~~s~dg~~l~v~~~~--------~~~v~~~d~~ 119 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL---K-PFGATINNTTQTLWFGNTV--------NSAVTAIDAK 119 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS---C-CCSEEEETTTTEEEEEETT--------TTEEEEEETT
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC---C-cceEEECCCCCEEEEEecC--------CCEEEEEeCC
Confidence 45777765332211112468999998776443222221 1 122333 34568887653 2688999999
Q ss_pred CCcEE
Q 020682 206 TRKWD 210 (322)
Q Consensus 206 t~~W~ 210 (322)
+.+-.
T Consensus 120 ~~~~~ 124 (353)
T 3vgz_A 120 TGEVK 124 (353)
T ss_dssp TCCEE
T ss_pred CCeeE
Confidence 87743
No 45
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=90.27 E-value=3.6 Score=41.13 Aligned_cols=176 Identities=10% Similarity=0.042 Sum_probs=92.1
Q ss_pred hccccccCCCCEEECCCCCCCCc-ccEEEEE-CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCC-CC-CCceeE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRL-DGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPK-DM-AHSHLG 173 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~-p~-~r~~~~ 173 (322)
.+..||+.+.+++.......+.. -.+++.. ++.||+... .-+++||+.+.+|........ +. ...-.+
T Consensus 428 Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 499 (781)
T 3v9f_A 428 NISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH--------AGVFVIDLASKKVIHHYDTSNSQLLENFVRS 499 (781)
T ss_dssp EEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET--------TEEEEEESSSSSCCEEECTTTSSCSCSCEEE
T ss_pred CEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC--------CceEEEeCCCCeEEecccCcccccccceeEE
Confidence 46677777777777653211111 1222222 467777432 238899999988876543221 00 112223
Q ss_pred EEEe-CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCC---CCCCCCCcEEEE-ECCEEEEEeccCCCCCCCCcce
Q 020682 174 VVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP---LPSPRYSPATQL-WRGRLHVMGGSKENRHTPGLEH 248 (322)
Q Consensus 174 ~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~---~p~~r~~~~~~~-~~~~Lyv~GG~~~~~~~~~~~~ 248 (322)
++.. ++.|++..- ..-+.+||+++++++.... ++.... .++.. -+|.|++-.. .+ +
T Consensus 500 i~~d~~g~lWigt~---------~~Gl~~~~~~~~~~~~~~~~~~l~~~~i-~~i~~d~~g~lWi~T~-~G------l-- 560 (781)
T 3v9f_A 500 IAQDSEGRFWIGTF---------GGGVGIYTPDMQLVRKFNQYEGFCSNTI-NQIYRSSKGQMWLATG-EG------L-- 560 (781)
T ss_dssp EEECTTCCEEEEES---------SSCEEEECTTCCEEEEECTTTTCSCSCE-EEEEECTTSCEEEEET-TE------E--
T ss_pred EEEcCCCCEEEEEc---------CCCEEEEeCCCCeEEEccCCCCCCCCee-EEEEECCCCCEEEEEC-CC------c--
Confidence 3333 577887431 1457889999998888753 222111 12222 2466776432 11 2
Q ss_pred EeeeeeccccccCceEecc---CCCCCcCceeEEEE-CCEEEEEecCCCCCCCCCCCCeeee
Q 020682 249 WSIAVKDGKALEKAWRTEI---PIPRGGPHRACFVF-NDRLFVVGGQEGDFMAKPGSPIFKC 306 (322)
Q Consensus 249 ~~~~v~~~~~~~~~W~~~~---~~p~~~~~~~~~~~-~~~lyv~GG~~~~~~~~p~~~~~~~ 306 (322)
++.||++++++.... .+|..... +++.- +|.|++.+ .+|...++|....+..
T Consensus 561 ----v~~~d~~~~~~~~~~~~~gl~~~~i~-~i~~d~~g~lW~~t-~~Gl~~~~~~~~~~~~ 616 (781)
T 3v9f_A 561 ----VCFPSARNFDYQVFQRKEGLPNTHIR-AISEDKNGNIWAST-NTGISCYITSKKCFYT 616 (781)
T ss_dssp ----EEESCTTTCCCEEECGGGTCSCCCCC-EEEECSSSCEEEEC-SSCEEEEETTTTEEEE
T ss_pred ----eEEECCCCCcEEEccccCCCCCceEE-EEEECCCCCEEEEc-CCceEEEECCCCceEE
Confidence 123335566665542 24544432 33333 56676654 6677778887655443
No 46
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=90.13 E-value=6.6 Score=34.23 Aligned_cols=135 Identities=10% Similarity=0.081 Sum_probs=67.5
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEEE--C--CEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--K--NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLG 173 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~ 173 (322)
.+..+|..+.+|..+..+.........+.. + +.+++.|+.+ ..+.+||..+..-.....+... ...-.+
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~~-~~~v~~ 152 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDAH-AIGVNS 152 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCTTSCCCEEEEECC-TTCEEE
T ss_pred EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC------CcEEEEecCCCCceeeEEecCC-CCceEE
Confidence 466777777776665444333222222333 2 5567777643 3578888876632111111110 111223
Q ss_pred EEEe--------------CCEEEEEecccCCCCCCCCceEEEEeCCCC--cEEEcCCCCCCCCCcEEEEE--C---CEEE
Q 020682 174 VVSD--------------GRYIYIVSGQYGPQCRGPTSRTFVLDSETR--KWDSIPPLPSPRYSPATQLW--R---GRLH 232 (322)
Q Consensus 174 ~~~~--------------~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~--~W~~~~~~p~~r~~~~~~~~--~---~~Ly 232 (322)
++.. ++.+++.|+.+ ..+..||..+. .+..+..+.........+.+ + ++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l 224 (379)
T 3jrp_A 153 ASWAPATIEEDGEHNGTKESRKFVTGGAD--------NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYL 224 (379)
T ss_dssp EEECCCC----------CTTCEEEEEETT--------SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEE
T ss_pred EEEcCccccccccccCCCCCCEEEEEeCC--------CeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeE
Confidence 3333 36677777753 35667776543 35554433322222222333 3 6788
Q ss_pred EEeccCCCCCCCCcceEeee
Q 020682 233 VMGGSKENRHTPGLEHWSIA 252 (322)
Q Consensus 233 v~GG~~~~~~~~~~~~~~~~ 252 (322)
+.|+.++ .+..|++.
T Consensus 225 ~s~~~dg-----~i~iwd~~ 239 (379)
T 3jrp_A 225 ASVSQDR-----TCIIWTQD 239 (379)
T ss_dssp EEEETTS-----CEEEEEES
T ss_pred EEEeCCC-----EEEEEeCC
Confidence 8888654 36677653
No 47
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=89.95 E-value=7.9 Score=32.55 Aligned_cols=141 Identities=8% Similarity=0.041 Sum_probs=69.3
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
++.+|+.... ...+++||+ +.+..... .+.. ...-.++++. ++.||+.... ...+.+||+ +
T Consensus 151 ~g~l~v~~~~------~~~i~~~~~-~g~~~~~~-~~~~-~~~~~~i~~~~~g~l~v~~~~--------~~~i~~~~~-~ 212 (299)
T 2z2n_A 151 DNALWFTENQ------NNAIGRITE-SGDITEFK-IPTP-ASGPVGITKGNDDALWFVEII--------GNKIGRITT-S 212 (299)
T ss_dssp TSCEEEEETT------TTEEEEECT-TCCEEEEE-CSST-TCCEEEEEECTTSSEEEEETT--------TTEEEEECT-T
T ss_pred CCCEEEEeCC------CCEEEEEcC-CCcEEEee-CCCC-CCcceeEEECCCCCEEEEccC--------CceEEEECC-C
Confidence 4678876421 135889998 66665531 1111 1223345554 5678886532 367889999 7
Q ss_pred CcEEEcCCCCCCCCCc-EEEEE-CCEEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccCCCCCc-CceeEEEECC
Q 020682 207 RKWDSIPPLPSPRYSP-ATQLW-RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGG-PHRACFVFND 283 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~-~~~~~-~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~~-~~~~~~~~~~ 283 (322)
.+..... ++...... .++.. +++||+.... ...+..|+ + +....... ++... .-.+++.-++
T Consensus 213 g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d-------~-~g~~~~~~-~~~~~~~~~~i~~~~g 277 (299)
T 2z2n_A 213 GEITEFK-IPTPNARPHAITAGAGIDLWFTEWG-----ANKIGRLT-------S-NNIIEEYP-IQIKSAEPHGICFDGE 277 (299)
T ss_dssp CCEEEEE-CSSTTCCEEEEEECSTTCEEEEETT-----TTEEEEEE-------T-TTEEEEEE-CSSSSCCEEEEEECSS
T ss_pred CcEEEEE-CCCCCCCceeEEECCCCCEEEeccC-----CceEEEEC-------C-CCceEEEe-CCCCCCccceEEecCC
Confidence 7776642 22122222 23332 5678876422 12244444 2 22222221 12111 1123333677
Q ss_pred EEEEEecCCCCCCCCCCC
Q 020682 284 RLFVVGGQEGDFMAKPGS 301 (322)
Q Consensus 284 ~lyv~GG~~~~~~~~p~~ 301 (322)
.||+....++...++|..
T Consensus 278 ~l~v~~~~~~l~~~~~~~ 295 (299)
T 2z2n_A 278 TIWFAMECDKIGKLTLIK 295 (299)
T ss_dssp CEEEEETTTEEEEEEEC-
T ss_pred CEEEEecCCcEEEEEcCc
Confidence 888876544444555543
No 48
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=89.84 E-value=4.8 Score=35.20 Aligned_cols=134 Identities=12% Similarity=0.085 Sum_probs=64.6
Q ss_pred hccccccCCCCEEECCCCCCCCccc-EEEEE-CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDG-AAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVV 175 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~ 175 (322)
.+..||....++..+..+....... +++.. ++++++.|+.+ ..+.+||.++.++.....+... ...-.+++
T Consensus 31 ~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~~~~-~~~v~~~~ 103 (372)
T 1k8k_C 31 EVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD------RNAYVWTLKGRTWKPTLVILRI-NRAARCVR 103 (372)
T ss_dssp EEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT------SCEEEEEEETTEEEEEEECCCC-SSCEEEEE
T ss_pred EEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC------CeEEEEECCCCeeeeeEEeecC-CCceeEEE
Confidence 4566666666555544443222222 22222 45666677643 2478889888877654332221 12223334
Q ss_pred Ee-CCEEEEEecccCCCCCCCCceEEEEeCCCCc-EEEcCCCCCC-CCCcEEEEE--CCEEEEEeccCCCCCCCCcceEe
Q 020682 176 SD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRK-WDSIPPLPSP-RYSPATQLW--RGRLHVMGGSKENRHTPGLEHWS 250 (322)
Q Consensus 176 ~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~-W~~~~~~p~~-r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~ 250 (322)
.. ++.+++.|+.+ ..+..||..+.. |........+ ........+ ++++++.|+.++ .+..|+
T Consensus 104 ~~~~~~~l~~~~~d--------~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~~~d 170 (372)
T 1k8k_C 104 WAPNEKKFAVGSGS--------RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF-----KCRIFS 170 (372)
T ss_dssp ECTTSSEEEEEETT--------SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS-----CEEEEE
T ss_pred ECCCCCEEEEEeCC--------CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC-----CEEEEE
Confidence 43 55566666643 345555555443 3322221111 111122222 556777777644 366666
Q ss_pred e
Q 020682 251 I 251 (322)
Q Consensus 251 ~ 251 (322)
+
T Consensus 171 ~ 171 (372)
T 1k8k_C 171 A 171 (372)
T ss_dssp C
T ss_pred c
Confidence 4
No 49
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=89.68 E-value=4.6 Score=35.38 Aligned_cols=102 Identities=10% Similarity=0.006 Sum_probs=51.8
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
+++.++.|+.+ ..+.+||.++.+-....... ...-.+++.. +++.++.|+.+ ..+..||..+
T Consensus 133 dg~~l~~g~~d------g~v~i~~~~~~~~~~~~~~~---~~~v~~~~~spdg~~lasg~~d--------g~i~iwd~~~ 195 (321)
T 3ow8_A 133 DSQYLATGTHV------GKVNIFGVESGKKEYSLDTR---GKFILSIAYSPDGKYLASGAID--------GIINIFDIAT 195 (321)
T ss_dssp TSSEEEEECTT------SEEEEEETTTCSEEEEEECS---SSCEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEEcCC------CcEEEEEcCCCceeEEecCC---CceEEEEEECCCCCEEEEEcCC--------CeEEEEECCC
Confidence 45566666643 35788888766533211111 1122333443 56666777653 4677899887
Q ss_pred CcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceEee
Q 020682 207 RKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
.+-...-......-......-++++++.|+.++ .+..|++
T Consensus 196 ~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg-----~i~iwd~ 235 (321)
T 3ow8_A 196 GKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDG-----YIKIYDV 235 (321)
T ss_dssp TEEEEEECCCSSCCCEEEECTTSCEEEEECTTS-----CEEEEET
T ss_pred CcEEEEEcccCCceeEEEEcCCCCEEEEEcCCC-----eEEEEEC
Confidence 753322111111111111223567777887654 3666764
No 50
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=89.41 E-value=5.2 Score=35.30 Aligned_cols=140 Identities=6% Similarity=0.112 Sum_probs=67.4
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
+++.++.|+.++ .+.++|..+..+..+..+... ...-.+++.. ++.+++.|+.+ ..+..+|..+
T Consensus 72 ~g~~l~s~s~D~------~v~iw~~~~~~~~~~~~~~~h-~~~v~~v~~sp~~~~l~s~s~D--------~~v~iwd~~~ 136 (345)
T 3fm0_A 72 CGNYLASASFDA------TTCIWKKNQDDFECVTTLEGH-ENEVKSVAWAPSGNLLATCSRD--------KSVWVWEVDE 136 (345)
T ss_dssp TSSEEEEEETTS------CEEEEEECCC-EEEEEEECCC-SSCEEEEEECTTSSEEEEEETT--------SCEEEEEECT
T ss_pred CCCEEEEEECCC------cEEEEEccCCCeEEEEEccCC-CCCceEEEEeCCCCEEEEEECC--------CeEEEEECCC
Confidence 456677777542 366777777766544333321 1122233443 56667777653 4566777765
Q ss_pred C-cEEEcCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccCCCCCcCceeEE--EE
Q 020682 207 R-KWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACF--VF 281 (322)
Q Consensus 207 ~-~W~~~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~~~~~~~~--~~ 281 (322)
. .+..+..+.........+.+ ++++++.|+.++ .+..|+.. +..|.....+.........+ .-
T Consensus 137 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~-----~i~~w~~~-------~~~~~~~~~~~~h~~~v~~l~~sp 204 (345)
T 3fm0_A 137 EDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDD-----TVKLYREE-------EDDWVCCATLEGHESTVWSLAFDP 204 (345)
T ss_dssp TSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTS-----CEEEEEEE-------TTEEEEEEEECCCSSCEEEEEECT
T ss_pred CCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCC-----cEEEEEec-------CCCEEEEEEecCCCCceEEEEECC
Confidence 4 23333222111111222223 456777777644 36667654 55665433322111111111 12
Q ss_pred CCEEEEEecCCCC
Q 020682 282 NDRLFVVGGQEGD 294 (322)
Q Consensus 282 ~~~lyv~GG~~~~ 294 (322)
+++.++.|+.++.
T Consensus 205 ~g~~l~s~s~D~~ 217 (345)
T 3fm0_A 205 SGQRLASCSDDRT 217 (345)
T ss_dssp TSSEEEEEETTSC
T ss_pred CCCEEEEEeCCCe
Confidence 5666677776654
No 51
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=89.31 E-value=0.52 Score=42.01 Aligned_cols=104 Identities=12% Similarity=0.159 Sum_probs=52.0
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
++++++.|+.+ ..+.+||..+..|..+..+... ...-.+++.. ++.+++.|+.+ ..+..||..+
T Consensus 22 ~g~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~s~d--------~~v~vwd~~~ 86 (377)
T 3dwl_C 22 QRTEFVTTTAT------NQVELYEQDGNGWKHARTFSDH-DKIVTCVDWAPKSNRIVTCSQD--------RNAYVYEKRP 86 (377)
T ss_dssp SSSEEECCCSS------SCBCEEEEETTEEEECCCBCCC-SSCEEEEEECTTTCCEEEEETT--------SSEEEC----
T ss_pred CCCEEEEecCC------CEEEEEEccCCceEEEEEEecC-CceEEEEEEeCCCCEEEEEeCC--------CeEEEEEcCC
Confidence 45566666643 2477788888888877666542 1222333443 55666667643 4577888877
Q ss_pred Cc-EEEcCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEee
Q 020682 207 RK-WDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 207 ~~-W~~~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
.. |.....+.........+.+ ++++++.|+.++ .+..|++
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~ 129 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGAR-----VISVCYF 129 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSS-----CEEECCC
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEecCC-----eEEEEEE
Confidence 66 4433222221112222233 456677777644 3555654
No 52
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=89.30 E-value=5.6 Score=34.02 Aligned_cols=130 Identities=9% Similarity=0.003 Sum_probs=62.1
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEEE--CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVV 175 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~ 175 (322)
.+..||....+......+............ +++.++.|+.+ ..+.+||..+.+........ ...-.+++
T Consensus 120 ~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------g~v~~~d~~~~~~~~~~~~~---~~~i~~~~ 190 (337)
T 1gxr_A 120 TLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD------GNIAVWDLHNQTLVRQFQGH---TDGASCID 190 (337)
T ss_dssp EEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEECCC---SSCEEEEE
T ss_pred cEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC------CcEEEEeCCCCceeeeeecc---cCceEEEE
Confidence 455666655553332222222221222222 45566666643 24888999876543322211 11223334
Q ss_pred Ee-CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEE-ECCEEEEEeccCCCCCCCCcceEee
Q 020682 176 SD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQL-WRGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 176 ~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
.. ++..++.|+. -..+..||+.+.+-...-..+.+ -..+.. -+++++++|+.++ .+..|++
T Consensus 191 ~~~~~~~l~~~~~--------dg~i~~~d~~~~~~~~~~~~~~~--v~~~~~s~~~~~l~~~~~~~-----~i~~~~~ 253 (337)
T 1gxr_A 191 ISNDGTKLWTGGL--------DNTVRSWDLREGRQLQQHDFTSQ--IFSLGYCPTGEWLAVGMESS-----NVEVLHV 253 (337)
T ss_dssp ECTTSSEEEEEET--------TSEEEEEETTTTEEEEEEECSSC--EEEEEECTTSSEEEEEETTS-----CEEEEET
T ss_pred ECCCCCEEEEEec--------CCcEEEEECCCCceEeeecCCCc--eEEEEECCCCCEEEEEcCCC-----cEEEEEC
Confidence 43 5556666653 25788899887764333222111 112222 2456777776543 3566664
No 53
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=89.12 E-value=8.8 Score=31.92 Aligned_cols=119 Identities=12% Similarity=0.019 Sum_probs=58.5
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEEE-CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~ 176 (322)
.+..+|..+........... ..-..++.. +++||+... + ..+.+||+............ ...-.++++
T Consensus 47 ~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~-~------~~i~~~d~~~~~~~~~~~~~---~~~p~~i~~ 115 (270)
T 1rwi_B 47 RVVKLATGSTGTTVLPFNGL-YQPQGLAVDGAGTVYVTDF-N------NRVVTLAAGSNNQTVLPFDG---LNYPEGLAV 115 (270)
T ss_dssp EEEEECC-----EECCCCSC-CSCCCEEECTTCCEEEEET-T------TEEEEECTTCSCCEECCCCS---CSSEEEEEE
T ss_pred cEEEecCCCcccceEeeCCc-CCcceeEECCCCCEEEEcC-C------CEEEEEeCCCceEeeeecCC---cCCCcceEE
Confidence 35566665544333321111 111233333 467888754 1 35899999877655442211 123345555
Q ss_pred e-CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEE-CCEEEEEec
Q 020682 177 D-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMGG 236 (322)
Q Consensus 177 ~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~Lyv~GG 236 (322)
. +++||+.... ...+.+||..+........... ..-..++.. +++||+...
T Consensus 116 ~~~g~l~v~~~~--------~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~ 168 (270)
T 1rwi_B 116 DTQGAVYVADRG--------NNRVVKLAAGSKTQTVLPFTGL-NDPDGVAVDNSGNVYVTDT 168 (270)
T ss_dssp CTTCCEEEEEGG--------GTEEEEECTTCCSCEECCCCSC-CSCCCEEECTTCCEEEEEG
T ss_pred CCCCCEEEEECC--------CCEEEEEECCCceeEeeccccC-CCceeEEEeCCCCEEEEEC
Confidence 5 6779987542 2578888877765544321111 111233333 567888754
No 54
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=89.03 E-value=6.7 Score=37.01 Aligned_cols=60 Identities=12% Similarity=0.193 Sum_probs=39.5
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~ 207 (322)
++++|+|-| +..|+||..+++.... ..+. .+. .-++....+++|+|-| +..+.||..+.
T Consensus 158 ~~~~yfFkG--------~~yw~yd~~~~~~~~~-~w~g-i~~-iDAA~~~~g~~YfFkG----------~~y~rfd~~~~ 216 (460)
T 1qhu_A 158 DEGILFFQG--------NRKWFWDLTTGTKKER-SWPA-VGN-CTSALRWLGRYYCFQG----------NQFLRFNPVSG 216 (460)
T ss_dssp SSEEEEEET--------TEEEEEETTTTEEEEE-CCTT-SCC-CSEEEEETTEEEEEET----------TEEEEECTTTC
T ss_pred CCeEEEEec--------ccEEEEecccceeecc-cCCC-CCc-cchheeeCCceEEEEC----------CEEEEEcCccC
Confidence 688999988 4689999987765431 1111 122 2344445789999988 56777887654
Q ss_pred c
Q 020682 208 K 208 (322)
Q Consensus 208 ~ 208 (322)
+
T Consensus 217 ~ 217 (460)
T 1qhu_A 217 E 217 (460)
T ss_dssp C
T ss_pred c
Confidence 3
No 55
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=88.86 E-value=4.6 Score=35.40 Aligned_cols=99 Identities=5% Similarity=0.099 Sum_probs=51.9
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEE-CCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD-RFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~-~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
+++.++.|+.+ ..+.+||..+.+-.. +..-.. .-.+++.. ++.+++.|+.+ ..+..||..
T Consensus 175 dg~~lasg~~d------g~i~iwd~~~~~~~~~~~~h~~----~v~~l~~spd~~~l~s~s~d--------g~i~iwd~~ 236 (321)
T 3ow8_A 175 DGKYLASGAID------GIINIFDIATGKLLHTLEGHAM----PIRSLTFSPDSQLLVTASDD--------GYIKIYDVQ 236 (321)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTEEEEEECCCSS----CCCEEEECTTSCEEEEECTT--------SCEEEEETT
T ss_pred CCCEEEEEcCC------CeEEEEECCCCcEEEEEcccCC----ceeEEEEcCCCCEEEEEcCC--------CeEEEEECC
Confidence 45666677654 247889988765332 211111 11233443 56677777643 457788988
Q ss_pred CCcEEEcCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEee
Q 020682 206 TRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 206 t~~W~~~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
+..-...-. .....-..+.+ ++++++.|+.++ .+..|++
T Consensus 237 ~~~~~~~~~--~h~~~v~~~~~sp~~~~l~s~s~D~-----~v~iwd~ 277 (321)
T 3ow8_A 237 HANLAGTLS--GHASWVLNVAFCPDDTHFVSSSSDK-----SVKVWDV 277 (321)
T ss_dssp TCCEEEEEC--CCSSCEEEEEECTTSSEEEEEETTS-----CEEEEET
T ss_pred CcceeEEEc--CCCCceEEEEECCCCCEEEEEeCCC-----cEEEEeC
Confidence 765433211 11111122223 566777777644 4677774
No 56
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=88.74 E-value=9.4 Score=31.74 Aligned_cols=120 Identities=13% Similarity=0.043 Sum_probs=60.6
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEEE-CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~ 176 (322)
.+..||+.......+..... ..-..++.. +++||+.... ...+.+||..+........... ..-.++++
T Consensus 88 ~i~~~d~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~~~~---~~p~~i~~ 157 (270)
T 1rwi_B 88 RVVTLAAGSNNQTVLPFDGL-NYPEGLAVDTQGAVYVADRG------NNRVVKLAAGSKTQTVLPFTGL---NDPDGVAV 157 (270)
T ss_dssp EEEEECTTCSCCEECCCCSC-SSEEEEEECTTCCEEEEEGG------GTEEEEECTTCCSCEECCCCSC---CSCCCEEE
T ss_pred EEEEEeCCCceEeeeecCCc-CCCcceEECCCCCEEEEECC------CCEEEEEECCCceeEeeccccC---CCceeEEE
Confidence 56677776554433321111 111233332 5678887542 1358888877665543321111 11234555
Q ss_pred e-CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEE-CCEEEEEec
Q 020682 177 D-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMGG 236 (322)
Q Consensus 177 ~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~Lyv~GG 236 (322)
. +++||+.... ...+.+||+.+..-........ ..-..++.. +|.||+...
T Consensus 158 ~~~g~l~v~~~~--------~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~ 210 (270)
T 1rwi_B 158 DNSGNVYVTDTD--------NNRVVKLEAESNNQVVLPFTDI-TAPWGIAVDEAGTVYVTEH 210 (270)
T ss_dssp CTTCCEEEEEGG--------GTEEEEECTTTCCEEECCCSSC-CSEEEEEECTTCCEEEEET
T ss_pred eCCCCEEEEECC--------CCEEEEEecCCCceEeecccCC-CCceEEEECCCCCEEEEEC
Confidence 4 5779987642 2578899998776544322111 111233333 457888754
No 57
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=88.60 E-value=6.2 Score=34.66 Aligned_cols=102 Identities=7% Similarity=0.068 Sum_probs=52.3
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
++.+++.|+.+ ..+.+||..+..-... +... ...-.+++.. ++.+++.|+.+ ..+..||..+
T Consensus 195 ~~~~l~sg~~d------~~v~~wd~~~~~~~~~--~~~h-~~~v~~v~~~p~~~~l~s~s~d--------~~v~iwd~~~ 257 (340)
T 1got_B 195 DTRLFVSGACD------ASAKLWDVREGMCRQT--FTGH-ESDINAICFFPNGNAFATGSDD--------ATCRLFDLRA 257 (340)
T ss_dssp TSSEEEEEETT------SCEEEEETTTCSEEEE--ECCC-SSCEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEEeCC------CcEEEEECCCCeeEEE--EcCC-cCCEEEEEEcCCCCEEEEEcCC--------CcEEEEECCC
Confidence 45677777754 2478889876653321 1110 1112233443 56677777653 4677888887
Q ss_pred CcEEEcCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEee
Q 020682 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
.+-...-..+........+.+ ++++++.|+.++ .+..|++
T Consensus 258 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~-----~i~vwd~ 299 (340)
T 1got_B 258 DQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF-----NCNVWDA 299 (340)
T ss_dssp TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS-----EEEEEET
T ss_pred CcEEEEEccCCcccceEEEEECCCCCEEEEECCCC-----eEEEEEc
Confidence 653322111111112222222 567777777643 3666664
No 58
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=88.48 E-value=9.6 Score=34.65 Aligned_cols=134 Identities=10% Similarity=0.078 Sum_probs=66.9
Q ss_pred ECCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 127 IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 127 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
..+.+++.|+.+ ..+.+||..+.+-...-... ...-.++...++. ++.|+.+ ..+..||..+
T Consensus 167 ~~~~~l~s~~~d------g~i~vwd~~~~~~~~~~~~h---~~~v~~~~~~~~~-l~s~s~d--------g~i~~wd~~~ 228 (445)
T 2ovr_B 167 MRDNIIISGSTD------RTLKVWNAETGECIHTLYGH---TSTVRCMHLHEKR-VVSGSRD--------ATLRVWDIET 228 (445)
T ss_dssp EETTEEEEEETT------SCEEEEETTTTEEEEEECCC---SSCEEEEEEETTE-EEEEETT--------SEEEEEESSS
T ss_pred ecCCEEEEEeCC------CeEEEEECCcCcEEEEECCC---CCcEEEEEecCCE-EEEEeCC--------CEEEEEECCC
Confidence 345566667653 34888898876543221111 1122334444554 5555542 5788899887
Q ss_pred CcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccCCCCCcCceeEEEECCEEE
Q 020682 207 RKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLF 286 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~ly 286 (322)
.+-...-. ........+.+++.+++.|+.++ .+..|++. +.+ .+..+.........+..++..+
T Consensus 229 ~~~~~~~~--~~~~~v~~~~~~~~~l~~~~~dg-----~i~iwd~~-------~~~--~~~~~~~~~~~v~~~~~~~~~l 292 (445)
T 2ovr_B 229 GQCLHVLM--GHVAAVRCVQYDGRRVVSGAYDF-----MVKVWDPE-------TET--CLHTLQGHTNRVYSLQFDGIHV 292 (445)
T ss_dssp CCEEEEEE--CCSSCEEEEEECSSCEEEEETTS-----CEEEEEGG-------GTE--EEEEECCCSSCEEEEEECSSEE
T ss_pred CcEEEEEc--CCcccEEEEEECCCEEEEEcCCC-----EEEEEECC-------CCc--EeEEecCCCCceEEEEECCCEE
Confidence 65332211 11122234455777777887654 36666643 222 1111111111123334477777
Q ss_pred EEecCCCC
Q 020682 287 VVGGQEGD 294 (322)
Q Consensus 287 v~GG~~~~ 294 (322)
+.|+.++.
T Consensus 293 ~~~~~d~~ 300 (445)
T 2ovr_B 293 VSGSLDTS 300 (445)
T ss_dssp EEEETTSC
T ss_pred EEEeCCCe
Confidence 77776654
No 59
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=88.41 E-value=2.1 Score=38.01 Aligned_cols=135 Identities=13% Similarity=0.065 Sum_probs=62.7
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEEE--CCEEEEEeecCCCCCCcceeEEEECCCCc-eEECCCCCCCCCCceeEE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNK-WVDRFDMPKDMAHSHLGV 174 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~~~~-W~~~~~~~~p~~r~~~~~ 174 (322)
.+..||.....|..+..+.........+.. ++++++.|+.+ ..+.+||..+.+ |.....+... ...-.++
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d------~~v~vwd~~~~~~~~~~~~~~~~-~~~v~~~ 106 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD------RNAYVYEKRPDGTWKQTLVLLRL-NRAATFV 106 (377)
T ss_dssp CBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT------SSEEEC------CCCCEEECCCC-SSCEEEE
T ss_pred EEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC------CeEEEEEcCCCCceeeeeEeccc-CCceEEE
Confidence 456677777777776666543333233333 45667777753 247888888766 5443323221 1222233
Q ss_pred EEe-CCEEEEEecccCCCCCCCCceEEEEeCCCCc-EEEcCCCCCC-CCCcEEEEE--CCEEEEEeccCCCCCCCCcceE
Q 020682 175 VSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRK-WDSIPPLPSP-RYSPATQLW--RGRLHVMGGSKENRHTPGLEHW 249 (322)
Q Consensus 175 ~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~-W~~~~~~p~~-r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~ 249 (322)
+.. ++.+++.|+.+ ..+..||..+.+ |..+..+..+ ......+.+ ++++++.|+.++ .+..|
T Consensus 107 ~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~-----~i~iw 173 (377)
T 3dwl_C 107 RWSPNEDKFAVGSGA--------RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR-----KAYVL 173 (377)
T ss_dssp ECCTTSSCCEEEESS--------SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS-----CEEEE
T ss_pred EECCCCCEEEEEecC--------CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC-----EEEEE
Confidence 333 55566666643 456777777654 3323222221 111122222 456777777653 36777
Q ss_pred eee
Q 020682 250 SIA 252 (322)
Q Consensus 250 ~~~ 252 (322)
++.
T Consensus 174 d~~ 176 (377)
T 3dwl_C 174 SAY 176 (377)
T ss_dssp EEC
T ss_pred EEE
Confidence 753
No 60
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=88.27 E-value=3.3 Score=36.84 Aligned_cols=100 Identities=6% Similarity=-0.023 Sum_probs=50.5
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
+++.++.|+.+ ..+.+||..+.+-...... . ...-.+++.. ++ +++.|+.+ ..+..||+.+
T Consensus 258 ~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~-~--~~~i~~~~~~~~~-~l~~~~~d--------~~i~i~d~~~ 319 (425)
T 1r5m_A 258 TNKLLLSASDD------GTLRIWHGGNGNSQNCFYG-H--SQSIVSASWVGDD-KVISCSMD--------GSVRLWSLKQ 319 (425)
T ss_dssp TTTEEEEEETT------SCEEEECSSSBSCSEEECC-C--SSCEEEEEEETTT-EEEEEETT--------SEEEEEETTT
T ss_pred CCCEEEEEcCC------CEEEEEECCCCccceEecC-C--CccEEEEEECCCC-EEEEEeCC--------CcEEEEECCC
Confidence 45566666643 2478888876543221111 1 1222344444 45 55666542 5788899887
Q ss_pred CcEEEcCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEeee
Q 020682 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIA 252 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~~ 252 (322)
.+-...-.... .....+.+ ++++++.|+.++ .+..|++.
T Consensus 320 ~~~~~~~~~~~--~~i~~~~~s~~~~~l~~~~~dg-----~i~i~~~~ 360 (425)
T 1r5m_A 320 NTLLALSIVDG--VPIFAGRISQDGQKYAVAFMDG-----QVNVYDLK 360 (425)
T ss_dssp TEEEEEEECTT--CCEEEEEECTTSSEEEEEETTS-----CEEEEECH
T ss_pred CcEeEecccCC--ccEEEEEEcCCCCEEEEEECCC-----eEEEEECC
Confidence 66333221111 11122222 466777777543 36667653
No 61
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=88.16 E-value=13 Score=32.72 Aligned_cols=117 Identities=15% Similarity=0.133 Sum_probs=61.4
Q ss_pred ccCCCCEEECCCCCCCCcccEEEEE-CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEeCCEE
Q 020682 103 PAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYI 181 (322)
Q Consensus 103 d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~~~I 181 (322)
.....+|+.+.. |....-..+... .+.+|++|.. ..+++-+-.-++|+.+.....+......++.+.++.+
T Consensus 21 ~d~g~~W~~~~~-~~~~~~~~v~~~~~~~~~~~G~~-------g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~ 92 (327)
T 2xbg_A 21 ALDYNPWEAIQL-PTTATILDMSFIDRHHGWLVGVN-------ATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEG 92 (327)
T ss_dssp BCSSCCEEEEEC-SCSSCEEEEEESSSSCEEEEETT-------TEEEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEE
T ss_pred CCCCCCceEeec-CCCCcEEEEEECCCCcEEEEcCC-------CeEEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeE
Confidence 334568998853 333322232222 4678886531 1244443345689997543211122344555667889
Q ss_pred EEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCC-CCCCCcEEE-EECCEEEEEec
Q 020682 182 YIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLP-SPRYSPATQ-LWRGRLHVMGG 236 (322)
Q Consensus 182 yv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p-~~r~~~~~~-~~~~~Lyv~GG 236 (322)
|++|.. ..++.-+-.-.+|+++.... .+-....++ .-++++|+.|.
T Consensus 93 ~~~g~~---------g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 140 (327)
T 2xbg_A 93 WIVGEP---------PIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN 140 (327)
T ss_dssp EEEEET---------TEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET
T ss_pred EEEECC---------CeEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC
Confidence 987531 34444433456899986431 121122333 34678888764
No 62
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=88.14 E-value=11 Score=31.80 Aligned_cols=93 Identities=15% Similarity=0.076 Sum_probs=50.6
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
++++||....+ ..+.+||+..+....+..... ...-.++++. ++.||+.... ...+.+||+..
T Consensus 131 ~g~l~v~~~~~------~~i~~~~~~g~~~~~~~~~~~--~~~p~~i~~~~~g~l~v~~~~--------~~~i~~~~~~g 194 (286)
T 1q7f_A 131 KGRIIVVECKV------MRVIIFDQNGNVLHKFGCSKH--LEFPNGVVVNDKQEIFISDNR--------AHCVKVFNYEG 194 (286)
T ss_dssp TSCEEEEETTT------TEEEEECTTSCEEEEEECTTT--CSSEEEEEECSSSEEEEEEGG--------GTEEEEEETTC
T ss_pred CCCEEEEECCC------CEEEEEcCCCCEEEEeCCCCc--cCCcEEEEECCCCCEEEEECC--------CCEEEEEcCCC
Confidence 56788875421 358899987654444321111 1223345554 5789987642 26788999876
Q ss_pred CcEEEcCCCCCCCCCc-EEEE-ECCEEEEEecc
Q 020682 207 RKWDSIPPLPSPRYSP-ATQL-WRGRLHVMGGS 237 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~-~~~~-~~~~Lyv~GG~ 237 (322)
..-..+..-. ....+ .++. -+|+||+....
T Consensus 195 ~~~~~~~~~g-~~~~p~~i~~d~~G~l~v~~~~ 226 (286)
T 1q7f_A 195 QYLRQIGGEG-ITNYPIGVGINSNGEILIADNH 226 (286)
T ss_dssp CEEEEESCTT-TSCSEEEEEECTTCCEEEEECS
T ss_pred CEEEEEccCC-ccCCCcEEEECCCCCEEEEeCC
Confidence 5544443211 01122 2333 25678887643
No 63
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=87.96 E-value=2.4 Score=36.75 Aligned_cols=64 Identities=5% Similarity=0.003 Sum_probs=41.9
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
++.+|+..+.+ ..+.++|+++.+.......+. ... .+++. ++.+|+.+.. ...++.+|++
T Consensus 9 ~~~~~v~~~~~------~~v~~~d~~~~~~~~~~~~~~---~~~-~~~~s~dg~~l~~~~~~--------~~~i~~~d~~ 70 (331)
T 3u4y_A 9 SNFGIVVEQHL------RRISFFSTDTLEILNQITLGY---DFV-DTAITSDCSNVVVTSDF--------CQTLVQIETQ 70 (331)
T ss_dssp CCEEEEEEGGG------TEEEEEETTTCCEEEEEECCC---CEE-EEEECSSSCEEEEEEST--------TCEEEEEECS
T ss_pred CCEEEEEecCC------CeEEEEeCcccceeeeEEccC---Ccc-eEEEcCCCCEEEEEeCC--------CCeEEEEECC
Confidence 57788887642 368999999888765444332 122 44443 4568877652 2588999998
Q ss_pred CCcE
Q 020682 206 TRKW 209 (322)
Q Consensus 206 t~~W 209 (322)
+.+-
T Consensus 71 ~~~~ 74 (331)
T 3u4y_A 71 LEPP 74 (331)
T ss_dssp SSSC
T ss_pred CCce
Confidence 8774
No 64
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=87.90 E-value=4.8 Score=40.07 Aligned_cols=142 Identities=11% Similarity=0.063 Sum_probs=73.8
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
++.|++++|.. .-+.+||+++++++.......+......++... ++.||+.. ..-+.+||+++
T Consensus 482 ~g~lWi~~~t~------~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt----------~~Gl~~~~~~~ 545 (758)
T 3ott_A 482 EGNVWVLLYNN------KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF----------HGGVMRINPKD 545 (758)
T ss_dssp TSCEEEEETTC------SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE----------TTEEEEECC--
T ss_pred CCCEEEEccCC------CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe----------cCceEEEecCC
Confidence 46688765532 138899999998887632111101122233333 57888643 14578899988
Q ss_pred CcEEEcC--CCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccCCCCCcCceeEEEECCE
Q 020682 207 RKWDSIP--PLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDR 284 (322)
Q Consensus 207 ~~W~~~~--~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~ 284 (322)
++++... .+|.. .-.++..-+|.|++-.. . .+.+|+ |++.+..... +|...+..++....+.
T Consensus 546 ~~~~~~~~~gl~~~-~i~~i~~~~g~lWi~t~-~------Gl~~~~-------~~~~~~~~~~-~~~~~~~~~~~~~~~G 609 (758)
T 3ott_A 546 ESQQSISFGSFSNN-EILSMTCVKNSIWVSTT-N------GLWIID-------RKTMDARQQN-MTNKRFTSLLFDPKED 609 (758)
T ss_dssp CCCCBCCCCC---C-CEEEEEEETTEEEEEES-S------CEEEEE-------TTTCCEEEC---CCCCCSEEEEETTTT
T ss_pred CceEEecccCCCcc-ceEEEEECCCCEEEECC-C------CeEEEc-------CCCceeEEec-CCCCceeeeEEECCCC
Confidence 8876653 33332 22344445788887542 2 244554 4455554432 3333333233333344
Q ss_pred EEEEecCCCCCCCCCCC
Q 020682 285 LFVVGGQEGDFMAKPGS 301 (322)
Q Consensus 285 lyv~GG~~~~~~~~p~~ 301 (322)
-+.|||.+|-..++|..
T Consensus 610 ~l~fG~~~Gl~~f~p~~ 626 (758)
T 3ott_A 610 CVYLGGADGFGISHSNL 626 (758)
T ss_dssp EEEEECBSEEEEEEC--
T ss_pred cEEEecCCceEEEChhh
Confidence 56678888877777764
No 65
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=87.79 E-value=8.3 Score=33.02 Aligned_cols=100 Identities=12% Similarity=0.118 Sum_probs=51.3
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
++++++.|+.+ ..+.+||..+.+-...-.... . .-.+++.. ++.+++.|+.+ ..+..||+.+
T Consensus 76 ~~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~~--~-~v~~~~~~~~~~~l~s~~~d--------~~i~iwd~~~ 138 (312)
T 4ery_A 76 DSNLLVSASDD------KTLKIWDVSSGKCLKTLKGHS--N-YVFCCNFNPQSNLIVSGSFD--------ESVRIWDVKT 138 (312)
T ss_dssp TSSEEEEEETT------SEEEEEETTTCCEEEEEECCS--S-CEEEEEECSSSSEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEECCC------CEEEEEECCCCcEEEEEcCCC--C-CEEEEEEcCCCCEEEEEeCC--------CcEEEEECCC
Confidence 45677777753 358889988765332111111 1 11223332 45566666643 4677899887
Q ss_pred CcEEEcCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEee
Q 020682 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
.+-... ++........+.+ ++++++.|+.++ .+..|++
T Consensus 139 ~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~wd~ 178 (312)
T 4ery_A 139 GKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDG-----LCRIWDT 178 (312)
T ss_dssp CCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEET
T ss_pred CEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCCC-----cEEEEEC
Confidence 653322 1111111122223 456777777654 3666664
No 66
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.75 E-value=3.9 Score=36.24 Aligned_cols=128 Identities=16% Similarity=0.059 Sum_probs=62.7
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEEE-CCE-EEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNL-FYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVV 175 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~ 175 (322)
.++.+|..+.+...+...+. ........- +++ |+.... +........++.+|..+.++..+.. ..+ .......+
T Consensus 169 ~l~~~d~~~g~~~~~~~~~~-~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~-~~~-~~~~~~~~ 244 (396)
T 3c5m_A 169 RLIKVDIETGELEVIHQDTA-WLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIKE-HAE-GESCTHEF 244 (396)
T ss_dssp EEEEEETTTCCEEEEEEESS-CEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESSC-CCT-TEEEEEEE
T ss_pred eEEEEECCCCcEEeeccCCc-ccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEeec-cCC-CccccceE
Confidence 46667776666655432111 111111121 233 444432 2222222468999998888777655 211 11222233
Q ss_pred Ee-CC-EEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEE-CCEEEEEec
Q 020682 176 SD-GR-YIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMGG 236 (322)
Q Consensus 176 ~~-~~-~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~Lyv~GG 236 (322)
.. ++ .|+..+-..+ .. ...++.+|+.+.+...+..++. .. ....- +++++++++
T Consensus 245 ~spdg~~l~~~~~~~~-~~---~~~l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 245 WIPDGSAMAYVSYFKG-QT---DRVIYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp ECTTSSCEEEEEEETT-TC---CEEEEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEE
T ss_pred ECCCCCEEEEEecCCC-Cc---cceEEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEec
Confidence 33 44 4554432222 11 2459999999988777754442 11 22233 677666654
No 67
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=87.61 E-value=5.7 Score=34.08 Aligned_cols=100 Identities=10% Similarity=0.078 Sum_probs=51.3
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
+++.++.|+.+ ..+.++|..+.+........ ...-.+++.. ++.+++.|+.+ ..+..||..+
T Consensus 34 ~~~~l~s~~~d------g~i~iw~~~~~~~~~~~~~h---~~~v~~~~~~~~~~~l~s~~~d--------~~i~vwd~~~ 96 (312)
T 4ery_A 34 NGEWLASSSAD------KLIKIWGAYDGKFEKTISGH---KLGISDVAWSSDSNLLVSASDD--------KTLKIWDVSS 96 (312)
T ss_dssp TSSEEEEEETT------SCEEEEETTTCCEEEEECCC---SSCEEEEEECTTSSEEEEEETT--------SEEEEEETTT
T ss_pred CCCEEEEeeCC------CeEEEEeCCCcccchhhccC---CCceEEEEEcCCCCEEEEECCC--------CEEEEEECCC
Confidence 45566666643 24777888776654432211 1122233433 55666667642 5678899887
Q ss_pred CcEEEcCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEee
Q 020682 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
.+-...-.. ....-..+.+ ++.+++.|+.++ .+..|++
T Consensus 97 ~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~d~-----~i~iwd~ 136 (312)
T 4ery_A 97 GKCLKTLKG--HSNYVFCCNFNPQSNLIVSGSFDE-----SVRIWDV 136 (312)
T ss_dssp CCEEEEEEC--CSSCEEEEEECSSSSEEEEEETTS-----CEEEEET
T ss_pred CcEEEEEcC--CCCCEEEEEEcCCCCEEEEEeCCC-----cEEEEEC
Confidence 653322111 1111112222 456777777654 3666764
No 68
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=87.59 E-value=7.1 Score=35.55 Aligned_cols=102 Identities=12% Similarity=0.042 Sum_probs=55.9
Q ss_pred EECCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCC
Q 020682 126 QIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 126 ~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
..++..++.|+.+ ..+.+||..+.+-...-... ...-.+++ .++.+++.|+.+ ..+..||..
T Consensus 140 ~~d~~~l~~g~~d------g~i~iwd~~~~~~~~~~~~h---~~~v~~l~-~~~~~l~sg~~d--------g~i~vwd~~ 201 (435)
T 1p22_A 140 QYDDQKIVSGLRD------NTIKIWDKNTLECKRILTGH---TGSVLCLQ-YDERVIITGSSD--------STVRVWDVN 201 (435)
T ss_dssp ECCSSEEEEEESS------SCEEEEESSSCCEEEEECCC---SSCEEEEE-CCSSEEEEEETT--------SCEEEEESS
T ss_pred EECCCEEEEEeCC------CeEEEEeCCCCeEEEEEcCC---CCcEEEEE-ECCCEEEEEcCC--------CeEEEEECC
Confidence 4467777787754 35888898776543321111 11122233 366677777653 567789988
Q ss_pred CCcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceEeee
Q 020682 206 TRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIA 252 (322)
Q Consensus 206 t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~~ 252 (322)
+.+-...- .........+.+++.+++.|+.++ .+..|++.
T Consensus 202 ~~~~~~~~--~~h~~~v~~l~~~~~~l~s~s~dg-----~i~vwd~~ 241 (435)
T 1p22_A 202 TGEMLNTL--IHHCEAVLHLRFNNGMMVTCSKDR-----SIAVWDMA 241 (435)
T ss_dssp SCCEEEEE--CCCCSCEEEEECCTTEEEEEETTS-----CEEEEECS
T ss_pred CCcEEEEE--cCCCCcEEEEEEcCCEEEEeeCCC-----cEEEEeCC
Confidence 77643321 111222233445666777777644 36667653
No 69
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=87.52 E-value=12 Score=31.49 Aligned_cols=130 Identities=18% Similarity=0.264 Sum_probs=68.4
Q ss_pred ECCEEEEEeecCCCCCCcceeEEEECCCCce--EECC----CCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEE
Q 020682 127 IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKW--VDRF----DMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTF 200 (322)
Q Consensus 127 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W--~~~~----~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~ 200 (322)
.++++|+|-| +.+|+++.....+ ..+. .+| .... ++...++++|+|-| +.+|
T Consensus 27 ~~g~~yfFkg--------~~~Wr~~~~~~~~~p~~Is~~wpgLP---~~ID-AA~~~~~~~yfFkG----------~~yw 84 (219)
T 1hxn_A 27 NHGATYVFSG--------SHYWRLDTNRDGWHSWPIAHQWPQGP---STVD-AAFSWEDKLYLIQD----------TKVY 84 (219)
T ss_dssp TTSCEEEEET--------TEEEESSSSSCTTCCEEGGGTCTTSC---SSCS-EEEEETTEEEEEET----------TEEE
T ss_pred CCCcEEEEeC--------CEEEEEcCCCCCCCceEhhhhccCCC---CCcc-EEEEECCcEEEecC----------CEEE
Confidence 4789999987 3577776554332 1121 222 2233 33335899999977 6788
Q ss_pred EEeCCCCc-E-----EEcC---CCCCC--CC-CcEEEEE--CCEEEEEeccCCCCCCCCcceEeeeeeccccccCceEec
Q 020682 201 VLDSETRK-W-----DSIP---PLPSP--RY-SPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTE 266 (322)
Q Consensus 201 ~yd~~t~~-W-----~~~~---~~p~~--r~-~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~ 266 (322)
+|+..++. = +.+. .+|.. .. --++..+ ++++|+|-|.. .++|+...+ | ...|...
T Consensus 85 ~~~~~~~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG~~-------ywr~d~~~~---P-~~i~~~~ 153 (219)
T 1hxn_A 85 VFLTKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAGRR-------LWWLDLKSG---A-QATWTEL 153 (219)
T ss_dssp EEECSSSCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEETTE-------EEEEEGGGG---G-GCCCEEE
T ss_pred EEeCCCCceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeCCE-------EEEEeCCCC---c-eEhhhcC
Confidence 88865321 1 1111 13332 11 2233333 57899997742 455553321 2 3445443
Q ss_pred cCCCCCcCceeEEE------------ECCEEEEEecC
Q 020682 267 IPIPRGGPHRACFV------------FNDRLFVVGGQ 291 (322)
Q Consensus 267 ~~~p~~~~~~~~~~------------~~~~lyv~GG~ 291 (322)
+-+|..-. ++.. .++.+|+|-|.
T Consensus 154 ~g~p~~vd--Aa~~~~~~~~~~~~~~~~~~~YFFkg~ 188 (219)
T 1hxn_A 154 PWPHEKVD--GALCMEKPLGPNSCSTSGPNLYLIHGP 188 (219)
T ss_dssp CCSCSCCS--EEEEESSCSSSCCSCSSSCEEEEEETT
T ss_pred CCCCCCcC--EEEEccccccccceeccCCeEEEEECC
Confidence 33343333 3333 45789999883
No 70
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=87.39 E-value=11 Score=31.12 Aligned_cols=105 Identities=8% Similarity=-0.073 Sum_probs=56.2
Q ss_pred hccccccCC-CCEEECCCCCC-CCcccEEEEECCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEE
Q 020682 98 TFADLPAPD-LEWEQMPSAPV-PRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVV 175 (322)
Q Consensus 98 ~~~~yd~~~-~~W~~~~~~p~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~ 175 (322)
.+..+|..+ .+...+..... .........-+++.+++++..... ...++.+|..+..-..+.... . ...++
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~---~--~~~~~ 135 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFG--KSAIYLLPSTGGTPRLMTKNL---P--SYWHG 135 (297)
T ss_dssp EEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTS--SCEEEEEETTCCCCEECCSSS---S--EEEEE
T ss_pred eEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCC--cceEEEEECCCCceEEeecCC---C--ccceE
Confidence 567778777 66665543332 121222222245555555533222 246899998877655543322 1 22233
Q ss_pred Ee--CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCC
Q 020682 176 SD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPL 215 (322)
Q Consensus 176 ~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~ 215 (322)
.. +..|++.++.++ ...++.+|..+.....+...
T Consensus 136 ~spdg~~l~~~~~~~~------~~~l~~~~~~~~~~~~~~~~ 171 (297)
T 2ojh_A 136 WSPDGKSFTYCGIRDQ------VFDIYSMDIDSGVETRLTHG 171 (297)
T ss_dssp ECTTSSEEEEEEEETT------EEEEEEEETTTCCEEECCCS
T ss_pred ECCCCCEEEEEECCCC------ceEEEEEECCCCcceEcccC
Confidence 33 445665554332 24788888888887776543
No 71
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=87.12 E-value=7.3 Score=34.29 Aligned_cols=106 Identities=8% Similarity=0.201 Sum_probs=55.7
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
++++++.||.+ ..+.++|.++.+|.....+...-...-.+++.. ++.+++.|+.+ ..+..+|..+
T Consensus 27 ~g~~las~~~D------~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D--------~~v~iw~~~~ 92 (345)
T 3fm0_A 27 AGTLLASCGGD------RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD--------ATTCIWKKNQ 92 (345)
T ss_dssp TSSCEEEEETT------SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT--------SCEEEEEECC
T ss_pred CCCEEEEEcCC------CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC--------CcEEEEEccC
Confidence 56677777754 247778888887754222111001222333433 55666677653 3456677777
Q ss_pred CcEEEcCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEeee
Q 020682 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIA 252 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~~ 252 (322)
..+..+..+..-...-..+.+ ++++++.|+.++ .+..|++.
T Consensus 93 ~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~-----~v~iwd~~ 135 (345)
T 3fm0_A 93 DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK-----SVWVWEVD 135 (345)
T ss_dssp C-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEEC
T ss_pred CCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCC-----eEEEEECC
Confidence 666554433221112222333 566777777654 36777753
No 72
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=86.65 E-value=18 Score=32.74 Aligned_cols=102 Identities=9% Similarity=0.156 Sum_probs=53.4
Q ss_pred ECCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 127 IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 127 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
.++..++.|+.+ ..+.+||..+.+-...-... .....++...++ +++.|+.+ ..+..||..+
T Consensus 287 ~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~---~~~v~~~~~~~~-~l~~~~~d--------g~i~vwd~~~ 348 (445)
T 2ovr_B 287 FDGIHVVSGSLD------TSIRVWDVETGNCIHTLTGH---QSLTSGMELKDN-ILVSGNAD--------STVKIWDIKT 348 (445)
T ss_dssp ECSSEEEEEETT------SCEEEEETTTCCEEEEECCC---CSCEEEEEEETT-EEEEEETT--------SCEEEEETTT
T ss_pred ECCCEEEEEeCC------CeEEEEECCCCCEEEEEcCC---cccEEEEEEeCC-EEEEEeCC--------CeEEEEECCC
Confidence 356666666643 24788898776533211111 112223344455 55556532 5678899887
Q ss_pred CcEEEcCCCCC-CCCCcEEEEECCEEEEEeccCCCCCCCCcceEee
Q 020682 207 RKWDSIPPLPS-PRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 207 ~~W~~~~~~p~-~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
.+-...-..+. .........+++.+++.|+.++ .+..|++
T Consensus 349 ~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg-----~v~iwd~ 389 (445)
T 2ovr_B 349 GQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDG-----TVKLWDL 389 (445)
T ss_dssp CCEEEEECSTTSCSSCEEEEEECSSEEEEEETTS-----EEEEEET
T ss_pred CcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCC-----eEEEEEC
Confidence 65332212111 1222334456777788887654 3666764
No 73
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=86.57 E-value=6.1 Score=36.16 Aligned_cols=74 Identities=9% Similarity=0.143 Sum_probs=44.0
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
+++.+++++.+... ..++++|+.+.+...+...+. ...+.+.. +.+|++.+..++ ...++.+|+.
T Consensus 189 dg~~la~~s~~~~~---~~i~~~d~~tg~~~~l~~~~~----~~~~~~~spdg~~la~~~~~~g------~~~i~~~d~~ 255 (415)
T 2hqs_A 189 DGSKLAYVTFESGR---SALVIQTLANGAVRQVASFPR----HNGAPAFSPDGSKLAFALSKTG------SLNLYVMDLA 255 (415)
T ss_dssp TSSEEEEEECTTSS---CEEEEEETTTCCEEEEECCSS----CEEEEEECTTSSEEEEEECTTS------SCEEEEEETT
T ss_pred CCCEEEEEEecCCC---cEEEEEECCCCcEEEeecCCC----cccCEEEcCCCCEEEEEEecCC------CceEEEEECC
Confidence 45555555543221 369999999887766544332 22233333 345665554322 3679999999
Q ss_pred CCcEEEcCC
Q 020682 206 TRKWDSIPP 214 (322)
Q Consensus 206 t~~W~~~~~ 214 (322)
+.+...+..
T Consensus 256 ~~~~~~l~~ 264 (415)
T 2hqs_A 256 SGQIRQVTD 264 (415)
T ss_dssp TCCEEECCC
T ss_pred CCCEEeCcC
Confidence 988877654
No 74
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=86.56 E-value=11 Score=33.38 Aligned_cols=101 Identities=14% Similarity=0.183 Sum_probs=52.7
Q ss_pred CEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCCC
Q 020682 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~ 207 (322)
+.+++.|+.+ ..+.+||..+.+......... ..-.+++.. ++.+++.|+.+ ..+..||..+.
T Consensus 210 g~~l~sgs~D------g~v~~wd~~~~~~~~~~~~h~---~~v~~v~~~p~~~~l~s~s~D--------~~v~lwd~~~~ 272 (354)
T 2pbi_B 210 GNTFVSGGCD------KKAMVWDMRSGQCVQAFETHE---SDVNSVRYYPSGDAFASGSDD--------ATCRLYDLRAD 272 (354)
T ss_dssp CCEEEEEETT------SCEEEEETTTCCEEEEECCCS---SCEEEEEECTTSSEEEEEETT--------SCEEEEETTTT
T ss_pred CCEEEEEeCC------CeEEEEECCCCcEEEEecCCC---CCeEEEEEeCCCCEEEEEeCC--------CeEEEEECCCC
Confidence 4677777754 247888988776543221111 112233333 45666677653 45678888776
Q ss_pred cEEEcCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEee
Q 020682 208 KWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 208 ~W~~~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
.-..+-...........+.+ ++++++.|+.++ .+..|++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~-----~i~vwd~ 313 (354)
T 2pbi_B 273 REVAIYSKESIIFGASSVDFSLSGRLLFAGYNDY-----TINVWDV 313 (354)
T ss_dssp EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS-----CEEEEET
T ss_pred cEEEEEcCCCcccceeEEEEeCCCCEEEEEECCC-----cEEEEEC
Confidence 53322211111222223333 567777777543 3667764
No 75
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=86.47 E-value=6.7 Score=38.77 Aligned_cols=97 Identities=19% Similarity=0.308 Sum_probs=58.4
Q ss_pred EEEECCEEEEEeecCCCCCCcceeEEEECCCC--ceEECCCCCCCC------CCceeEEEEeCCEEEEEecccCCCCCCC
Q 020682 124 AIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDN--KWVDRFDMPKDM------AHSHLGVVSDGRYIYIVSGQYGPQCRGP 195 (322)
Q Consensus 124 ~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~--~W~~~~~~~~p~------~r~~~~~~~~~~~Iyv~GG~~~~~~~~~ 195 (322)
-++.++.||+.... ..++.+|.++- .|+.-...+... .....+.++.+++||+...
T Consensus 73 P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~--------- 136 (677)
T 1kb0_A 73 PVVVDGIMYVSASW-------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW--------- 136 (677)
T ss_dssp CEEETTEEEEECGG-------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT---------
T ss_pred CEEECCEEEEECCC-------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC---------
Confidence 35679999998752 35899998754 487744322100 0112345678999998643
Q ss_pred CceEEEEeCCCCc--EEEcCC-C-CC-CCCCcEEEEECCEEEEEec
Q 020682 196 TSRTFVLDSETRK--WDSIPP-L-PS-PRYSPATQLWRGRLHVMGG 236 (322)
Q Consensus 196 ~~~v~~yd~~t~~--W~~~~~-~-p~-~r~~~~~~~~~~~Lyv~GG 236 (322)
-..+..+|.+|.+ |+.-.. - +. .....+-++.++++|+..+
T Consensus 137 dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~ 182 (677)
T 1kb0_A 137 DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNG 182 (677)
T ss_dssp TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCB
T ss_pred CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEec
Confidence 2679999998875 876432 1 11 1122234467888887543
No 76
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=86.39 E-value=7.5 Score=34.42 Aligned_cols=132 Identities=7% Similarity=-0.065 Sum_probs=64.1
Q ss_pred hccccccCCCCEEECCCCCCCCcc-cEEEEE--CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLD-GAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGV 174 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~ 174 (322)
.+..||..+.+............. .+++.. ++.+++.|+.+ ..+.++|..+.....+...... ...-.++
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~-~~~v~~~ 169 (383)
T 3ei3_B 97 DIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR------GATTLRDFSGSVIQVFAKTDSW-DYWYCCV 169 (383)
T ss_dssp CEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT------TEEEEEETTSCEEEEEECCCCS-SCCEEEE
T ss_pred eEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC------CEEEEEECCCCceEEEeccCCC-CCCeEEE
Confidence 455666665554433222111121 222222 34666666643 3588899987666554433221 1112233
Q ss_pred EEe-CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEE--CCE-EEEEeccCCCCCCCCcceEe
Q 020682 175 VSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGR-LHVMGGSKENRHTPGLEHWS 250 (322)
Q Consensus 175 ~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~-Lyv~GG~~~~~~~~~~~~~~ 250 (322)
+.. ++.+++.|+.+ ..+..||+....-..+..- ......+.+ +++ +++.|+.++ .+..|+
T Consensus 170 ~~~~~~~~l~~~~~d--------~~i~i~d~~~~~~~~~~~h---~~~v~~~~~~~~~~~~l~s~~~d~-----~i~iwd 233 (383)
T 3ei3_B 170 DVSVSRQMLATGDST--------GRLLLLGLDGHEIFKEKLH---KAKVTHAEFNPRCDWLMATSSVDA-----TVKLWD 233 (383)
T ss_dssp EEETTTTEEEEEETT--------SEEEEEETTSCEEEEEECS---SSCEEEEEECSSCTTEEEEEETTS-----EEEEEE
T ss_pred EECCCCCEEEEECCC--------CCEEEEECCCCEEEEeccC---CCcEEEEEECCCCCCEEEEEeCCC-----EEEEEe
Confidence 333 55566666642 5788888854443333211 111122222 344 777777643 366676
Q ss_pred ee
Q 020682 251 IA 252 (322)
Q Consensus 251 ~~ 252 (322)
+.
T Consensus 234 ~~ 235 (383)
T 3ei3_B 234 LR 235 (383)
T ss_dssp GG
T ss_pred CC
Confidence 53
No 77
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=86.37 E-value=10 Score=33.16 Aligned_cols=103 Identities=15% Similarity=0.143 Sum_probs=49.2
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCc--eEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
++..++.||.+ ..+.+||..+.. ......+..............++.+ +.|+.+ ..+..||+.
T Consensus 108 ~~~~l~s~~~d------~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l-~s~s~d--------~~i~~wd~~ 172 (340)
T 1got_B 108 SGNYVACGGLD------NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQI-VTSSGD--------TTCALWDIE 172 (340)
T ss_dssp TSSEEEEEETT------CEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEE-EEEETT--------SCEEEEETT
T ss_pred CCCEEEEEeCC------CeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcE-EEEECC--------CcEEEEECC
Confidence 45666777754 357788887643 1111111110011122222235654 445432 567789988
Q ss_pred CCcEEEcCCCCCCCCCcEEEE-ECCEEEEEeccCCCCCCCCcceEee
Q 020682 206 TRKWDSIPPLPSPRYSPATQL-WRGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 206 t~~W~~~~~~p~~r~~~~~~~-~~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
+.+-...-...... -..+.. -++++++.|+.++ .+..|++
T Consensus 173 ~~~~~~~~~~h~~~-v~~~~~~~~~~~l~sg~~d~-----~v~~wd~ 213 (340)
T 1got_B 173 TGQQTTTFTGHTGD-VMSLSLAPDTRLFVSGACDA-----SAKLWDV 213 (340)
T ss_dssp TTEEEEEECCCSSC-EEEEEECTTSSEEEEEETTS-----CEEEEET
T ss_pred CCcEEEEEcCCCCc-eEEEEECCCCCEEEEEeCCC-----cEEEEEC
Confidence 87643321111111 111222 2566788887654 3667774
No 78
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=86.26 E-value=5.4 Score=35.54 Aligned_cols=102 Identities=14% Similarity=0.206 Sum_probs=52.7
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
+++.++.|+.+ ..+.+||..+.+-...-.... ..-.++++. ++.+++.+|.+ ..+..||+.
T Consensus 150 dg~~l~sgs~d------g~v~iwd~~~~~~~~~~~~h~---~~v~~v~~s~~~~~~~~s~~~d--------g~v~~wd~~ 212 (357)
T 4g56_B 150 DGTQAVSGGKD------FSVKVWDLSQKAVLKSYNAHS---SEVNCVAACPGKDTIFLSCGED--------GRILLWDTR 212 (357)
T ss_dssp SSSEEEEEETT------SCEEEEETTTTEEEEEECCCS---SCEEEEEECTTCSSCEEEEETT--------SCEEECCTT
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEEcCCC---CCEEEEEEccCCCceeeeeccC--------CceEEEECC
Confidence 45667777754 247888988765433211111 112233333 34567777753 456778887
Q ss_pred CCcEEEcCCCCCCCCCcEEEEE---CCEEEEEeccCCCCCCCCcceEee
Q 020682 206 TRKWDSIPPLPSPRYSPATQLW---RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 206 t~~W~~~~~~p~~r~~~~~~~~---~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
+.+-...-...........+.+ ++.+++.|+.++ .+..|++
T Consensus 213 ~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~-----~i~~wd~ 256 (357)
T 4g56_B 213 KPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG-----NVSLVNI 256 (357)
T ss_dssp SSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS-----CEEEEES
T ss_pred CCceeeeeeeccccccccchhhhhcccceEEEeeccc-----ceeEEEC
Confidence 7653322222222222223333 356777887644 3666764
No 79
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=86.15 E-value=7 Score=33.67 Aligned_cols=102 Identities=13% Similarity=0.136 Sum_probs=50.3
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~ 207 (322)
++.+.+.|+.+ ..+.++|.++..-...-.... ..........++.+++.|+.+ ..+..||..+.
T Consensus 24 ~~~~l~s~~~d------g~v~lWd~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~s~s~d--------~~i~vwd~~~~ 87 (304)
T 2ynn_A 24 TEPWVLTTLYS------GRVELWNYETQVEVRSIQVTE--TPVRAGKFIARKNWIIVGSDD--------FRIRVFNYNTG 87 (304)
T ss_dssp SSSEEEEEETT------SEEEEEETTTTEEEEEEECCS--SCEEEEEEEGGGTEEEEEETT--------SEEEEEETTTC
T ss_pred CCCEEEEEcCC------CcEEEEECCCCceeEEeeccC--CcEEEEEEeCCCCEEEEECCC--------CEEEEEECCCC
Confidence 45566667643 357888988765332111111 112222222355566666642 56778898876
Q ss_pred cEEEcCCCCCCCCCcEEEE-ECCEEEEEeccCCCCCCCCcceEee
Q 020682 208 KWDSIPPLPSPRYSPATQL-WRGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 208 ~W~~~~~~p~~r~~~~~~~-~~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
+-...-.... ..-..++. -++++++.|+.++ .+..|++
T Consensus 88 ~~~~~~~~h~-~~v~~~~~~~~~~~l~sgs~D~-----~v~lWd~ 126 (304)
T 2ynn_A 88 EKVVDFEAHP-DYIRSIAVHPTKPYVLSGSDDL-----TVKLWNW 126 (304)
T ss_dssp CEEEEEECCS-SCEEEEEECSSSSEEEEEETTS-----CEEEEEG
T ss_pred cEEEEEeCCC-CcEEEEEEcCCCCEEEEECCCC-----eEEEEEC
Confidence 5322111111 11112222 2455777777644 4777775
No 80
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=85.94 E-value=10 Score=37.91 Aligned_cols=175 Identities=11% Similarity=0.069 Sum_probs=87.6
Q ss_pred hccccccCCCCEEECCCCC------CC-CcccEEEEE-CCE-EEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCC-
Q 020682 98 TFADLPAPDLEWEQMPSAP------VP-RLDGAAIQI-KNL-FYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDM- 167 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p------~~-r~~~~~~~~-~~~-lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~- 167 (322)
-+..||+.+.+++.....+ .+ ..-.+++.. ++. |||- ..+ .-+.+||+.+.++..........
T Consensus 378 Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWig-t~~------~Gl~~~d~~~~~~~~~~~~~~~l~ 450 (795)
T 4a2l_A 378 GLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIG-THA------GGLSILHRNSGQVENFNQRNSQLV 450 (795)
T ss_dssp CEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEE-ETT------TEEEEEETTTCCEEEECTTTSCCS
T ss_pred CeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEE-eCc------CceeEEeCCCCcEEEeecCCCCcC
Confidence 3566777777776654321 01 112233332 455 6663 211 23889999988877654321100
Q ss_pred CCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCC--CCC--CC-CcEEEE-ECCEEEEEeccCCC
Q 020682 168 AHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPL--PSP--RY-SPATQL-WRGRLHVMGGSKEN 240 (322)
Q Consensus 168 ~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~--p~~--r~-~~~~~~-~~~~Lyv~GG~~~~ 240 (322)
...-.+++.. ++.|++... .-+.+||+++++|+..... +.. .. -.++.. -+|+|++-.. .
T Consensus 451 ~~~v~~i~~d~~g~lwigt~----------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-- 517 (795)
T 4a2l_A 451 NENVYAILPDGEGNLWLGTL----------SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E-- 517 (795)
T ss_dssp CSCEEEEEECSSSCEEEEES----------SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S--
T ss_pred CCeeEEEEECCCCCEEEEec----------CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-C--
Confidence 1222333333 567887432 3578899999999887532 111 11 112222 2466776432 2
Q ss_pred CCCCCcceEeeeeeccccccCceEeccC------CCCCcCceeEEE-ECCEEEEEecCCCCCCCCCCCCeeee
Q 020682 241 RHTPGLEHWSIAVKDGKALEKAWRTEIP------IPRGGPHRACFV-FNDRLFVVGGQEGDFMAKPGSPIFKC 306 (322)
Q Consensus 241 ~~~~~~~~~~~~v~~~~~~~~~W~~~~~------~p~~~~~~~~~~-~~~~lyv~GG~~~~~~~~p~~~~~~~ 306 (322)
.+.+|+. .++.+ .... ++.... .+++. -++.|++... .|...++|....+..
T Consensus 518 ----Gl~~~~~-------~~~~~-~~~~~~~~~~l~~~~i-~~i~~d~~g~lWigT~-~Gl~~~d~~~~~~~~ 576 (795)
T 4a2l_A 518 ----GLSVFKQ-------EGLDI-QKASILPVSNVTKLFT-NCIYEASNGIIWVGTR-EGFYCFNEKDKQIKR 576 (795)
T ss_dssp ----CEEEEEE-------ETTEE-EECCCSCSCGGGGSCE-EEEEECTTSCEEEEES-SCEEEEETTTTEEEE
T ss_pred ----ceEEEeC-------CCCeE-EEecCCCCCCCCCCee-EEEEECCCCCEEEEeC-CCceeECCCCCcEEE
Confidence 2555553 35555 3221 222221 12222 2567776554 466777776655543
No 81
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=85.72 E-value=11 Score=34.26 Aligned_cols=93 Identities=10% Similarity=0.077 Sum_probs=45.7
Q ss_pred ceEEEEeCCCCcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccCCCCCcCce
Q 020682 197 SRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHR 276 (322)
Q Consensus 197 ~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~~~~~ 276 (322)
..+..||..+.+-...-.............-+++.++.|+.++ .+..|++. +.+ .+..+.......
T Consensus 290 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg-----~i~vwd~~-------~~~--~~~~~~~h~~~v 355 (464)
T 3v7d_B 290 NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDT-----TIRIWDLE-------NGE--LMYTLQGHTALV 355 (464)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTS-----CEEEEETT-------TTE--EEEEECCCSSCE
T ss_pred CeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCC-----cEEEEECC-------CCc--EEEEEeCCCCcE
Confidence 5678899887654332211111111112222456677777644 36677643 222 222222112222
Q ss_pred eEEEECCEEEEEecCCCCC-CCCCCCCe
Q 020682 277 ACFVFNDRLFVVGGQEGDF-MAKPGSPI 303 (322)
Q Consensus 277 ~~~~~~~~lyv~GG~~~~~-~~~p~~~~ 303 (322)
..+..+++.++.|+.++.. +++.....
T Consensus 356 ~~~~~~~~~l~s~s~dg~v~vwd~~~~~ 383 (464)
T 3v7d_B 356 GLLRLSDKFLVSAAADGSIRGWDANDYS 383 (464)
T ss_dssp EEEEECSSEEEEEETTSEEEEEETTTCC
T ss_pred EEEEEcCCEEEEEeCCCcEEEEECCCCc
Confidence 4455567788888877653 45555433
No 82
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=85.66 E-value=9.4 Score=37.61 Aligned_cols=95 Identities=19% Similarity=0.285 Sum_probs=57.1
Q ss_pred EEEECCEEEEEeecCCCCCCcceeEEEECCCC--ceEECCCCCCCC------CCceeEEEEeCCEEEEEecccCCCCCCC
Q 020682 124 AIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDN--KWVDRFDMPKDM------AHSHLGVVSDGRYIYIVSGQYGPQCRGP 195 (322)
Q Consensus 124 ~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~--~W~~~~~~~~p~------~r~~~~~~~~~~~Iyv~GG~~~~~~~~~ 195 (322)
-++.++.||+.... ..++.+|.++- .|+.-...+... .....+.++.+++||+...
T Consensus 62 P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--------- 125 (668)
T 1kv9_A 62 PLFHDGVIYTSMSW-------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL--------- 125 (668)
T ss_dssp CEEETTEEEEEEGG-------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT---------
T ss_pred CEEECCEEEEECCC-------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC---------
Confidence 35679999998752 35888998654 487643322100 0012335667899988542
Q ss_pred CceEEEEeCCCCc--EEEcCCCCC--CCCCcEEEEECCEEEEE
Q 020682 196 TSRTFVLDSETRK--WDSIPPLPS--PRYSPATQLWRGRLHVM 234 (322)
Q Consensus 196 ~~~v~~yd~~t~~--W~~~~~~p~--~r~~~~~~~~~~~Lyv~ 234 (322)
-..+..+|.+|.+ |+.-..-+. .....+-++.++++|+-
T Consensus 126 dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg 168 (668)
T 1kv9_A 126 DGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIG 168 (668)
T ss_dssp TSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEEC
T ss_pred CCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEe
Confidence 2679999998875 886542111 12222345678888774
No 83
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=85.64 E-value=8.2 Score=37.27 Aligned_cols=99 Identities=14% Similarity=0.214 Sum_probs=57.8
Q ss_pred EEEEECCEEEEEeecCCCCCCcceeEEEEC-CCC--ceEECCCCCCCC------CCceeEEEEeCCEEEEEecccCCCCC
Q 020682 123 AAIQIKNLFYVFAGYGSLDYVHSHVDVYNF-TDN--KWVDRFDMPKDM------AHSHLGVVSDGRYIYIVSGQYGPQCR 193 (322)
Q Consensus 123 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~-~~~--~W~~~~~~~~p~------~r~~~~~~~~~~~Iyv~GG~~~~~~~ 193 (322)
.-++.++.||+.... ...++++|. ++. .|+.-....... .....+.++.+++||+...
T Consensus 57 ~P~v~~g~vyv~~~~------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------- 123 (571)
T 2ad6_A 57 APLVIGDMMYVHSAF------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------- 123 (571)
T ss_dssp CCEEETTEEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------
T ss_pred ccEEECCEEEEEeCC------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-------
Confidence 335679999998662 135899998 544 488743322100 0112245677999998643
Q ss_pred CCCceEEEEeCCCCc--EEEc-CCCCCC-CCCcEEEEECCEEEEEec
Q 020682 194 GPTSRTFVLDSETRK--WDSI-PPLPSP-RYSPATQLWRGRLHVMGG 236 (322)
Q Consensus 194 ~~~~~v~~yd~~t~~--W~~~-~~~p~~-r~~~~~~~~~~~Lyv~GG 236 (322)
-..++.+|.+|.+ |+.- ...+.. ....+-++.++++|+-.+
T Consensus 124 --dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~ 168 (571)
T 2ad6_A 124 --NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCS 168 (571)
T ss_dssp --TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECB
T ss_pred --CCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEec
Confidence 2679999998874 8754 221111 112233456888887543
No 84
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=85.49 E-value=5 Score=35.17 Aligned_cols=140 Identities=12% Similarity=0.132 Sum_probs=66.0
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEeC---CEEEEEecccCCCCCCCCceEEEEeC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDG---RYIYIVSGQYGPQCRGPTSRTFVLDS 204 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~---~~Iyv~GG~~~~~~~~~~~~v~~yd~ 204 (322)
++.+++.|+.+ ..+.++|..+..|..+..+... ...-.++.... +..++.|+.++ .+..||.
T Consensus 164 ~~~~l~s~s~D------~~i~iW~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~l~s~s~D~--------~v~iw~~ 228 (330)
T 2hes_X 164 SEALLASSSYD------DTVRIWKDYDDDWECVAVLNGH-EGTVWSSDFDKTEGVFRLCSGSDDS--------TVRVWKY 228 (330)
T ss_dssp SSSEEEEEETT------SCEEEEEEETTEEEEEEEECCC-SSCEEEEEECCSSSSCEEEEEETTS--------CEEEEEE
T ss_pred CCCEEEEEcCC------CeEEEEECCCCCeeEEEEccCC-CCcEEEEEecCCCCeeEEEEEeCCC--------eEEEEEe
Confidence 45667777754 2467778777777655444321 11112333332 34555566432 3444443
Q ss_pred CC------CcEEEcCCCCCC--CCCcEEEEECCEEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccCCCCCcC--
Q 020682 205 ET------RKWDSIPPLPSP--RYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGP-- 274 (322)
Q Consensus 205 ~t------~~W~~~~~~p~~--r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~~~-- 274 (322)
.+ ..|..+..++.. ..-..++.-.+.+++.||.++ .+..|+.. +..|..+........
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg-----~v~iw~~~-------~~~~~~~~~~~~~h~~~ 296 (330)
T 2hes_X 229 MGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADG-----VLAVYEEV-------DGEWKVFAKRALCHGVY 296 (330)
T ss_dssp EEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTS-----CEEEEEEE-------TTEEEEEEEESCTTTTS
T ss_pred cCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCC-----EEEEEEcC-------CCceEEEeccccccccc
Confidence 32 246555433321 111222222344666777543 46777754 666755432211111
Q ss_pred ceeEEEE----CCEEEEEecCCCC
Q 020682 275 HRACFVF----NDRLFVVGGQEGD 294 (322)
Q Consensus 275 ~~~~~~~----~~~lyv~GG~~~~ 294 (322)
....+.. ++++++.||.++.
T Consensus 297 ~v~~v~~~~~~~~~~las~s~Dg~ 320 (330)
T 2hes_X 297 EINVVKWLELNGKTILATGGDDGI 320 (330)
T ss_dssp CEEEEEEC-----CCEEEEETTSE
T ss_pred eEEEEEEecCCCceEEEEecCCCc
Confidence 1122221 4678888888764
No 85
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=85.18 E-value=10 Score=37.74 Aligned_cols=173 Identities=10% Similarity=0.124 Sum_probs=81.3
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEEE--C--CEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--K--NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLG 173 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~ 173 (322)
.+..+|..+.+|..+..+.........+.. + +.+++.|+.+ ..+.+||..+..-......... ...-.+
T Consensus 78 ~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d------g~I~vwdl~~~~~~~~~~~~~~-~~~v~~ 150 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDAH-AIGVNS 150 (753)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCSSSCCCCEEEECC-SSCEEE
T ss_pred eEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC------CcEEEEEeecCCCcceeEeecC-CCceEE
Confidence 466777777766555444333332233333 2 5677777753 3578888876532111111110 111122
Q ss_pred EEEe--------------CCEEEEEecccCCCCCCCCceEEEEeCCCC--cEEEcCCCCCCCCCcEEEEE--C---CEEE
Q 020682 174 VVSD--------------GRYIYIVSGQYGPQCRGPTSRTFVLDSETR--KWDSIPPLPSPRYSPATQLW--R---GRLH 232 (322)
Q Consensus 174 ~~~~--------------~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~--~W~~~~~~p~~r~~~~~~~~--~---~~Ly 232 (322)
++.. ++.+++.|+.+ ..+..||..+. .+..+..+.........+.+ + ++++
T Consensus 151 l~~~p~~~~~~~~~~~~~d~~~l~sgs~d--------g~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l 222 (753)
T 3jro_A 151 ASWAPATIEEDGEHNGTKESRKFVTGGAD--------NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYL 222 (753)
T ss_dssp EEECCCC---------CGGGCCEEEEETT--------SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEE
T ss_pred EEecCcccccccccccCCCCCEEEEEECC--------CeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEE
Confidence 2322 25666677653 34666666543 44444333222222222333 3 6788
Q ss_pred EEeccCCCCCCCCcceEeeeeeccccccCceEec-cCC--CCCcCceeEEEECCEEEEEecCCCCC
Q 020682 233 VMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTE-IPI--PRGGPHRACFVFNDRLFVVGGQEGDF 295 (322)
Q Consensus 233 v~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~-~~~--p~~~~~~~~~~~~~~lyv~GG~~~~~ 295 (322)
+.||.++ .+..|++. .....+... ... ...........-+++.++.||.++..
T Consensus 223 ~s~s~Dg-----~I~iwd~~-----~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I 278 (753)
T 3jro_A 223 ASVSQDR-----TCIIWTQD-----NEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKV 278 (753)
T ss_dssp EEEESSS-----CEEEEEES-----SSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCE
T ss_pred EEEecCC-----EEEEecCC-----CCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEE
Confidence 8888654 36777754 112222211 111 11111112223467778888877653
No 86
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=84.84 E-value=12 Score=33.10 Aligned_cols=102 Identities=14% Similarity=0.219 Sum_probs=51.5
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
+++.++.|+.+ ..+.++|.++.+-.. .+... ...-.+++.. +..+++.|+.+ ..+..||..
T Consensus 138 dg~~l~sgs~d------~~i~iwd~~~~~~~~--~~~~h-~~~V~~~~~~~~~~~~l~s~s~D--------~~v~iwd~~ 200 (344)
T 4gqb_B 138 SGTQAVSGSKD------ICIKVWDLAQQVVLS--SYRAH-AAQVTCVAASPHKDSVFLSCSED--------NRILLWDTR 200 (344)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTEEEE--EECCC-SSCEEEEEECSSCTTEEEEEETT--------SCEEEEETT
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEE--EEcCc-CCceEEEEecCCCCCceeeeccc--------ccccccccc
Confidence 56667777754 247888988765332 22211 1111233332 34577777753 457788988
Q ss_pred CCcEEEcCCCCCCCCCcEEEEE---CCEEEEEeccCCCCCCCCcceEee
Q 020682 206 TRKWDSIPPLPSPRYSPATQLW---RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 206 t~~W~~~~~~p~~r~~~~~~~~---~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
+.+-...-...........+.+ ++++++.|+.++ .+..||+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg-----~v~~wd~ 244 (344)
T 4gqb_B 201 CPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG-----TVSLVDT 244 (344)
T ss_dssp SSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS-----EEEEEES
T ss_pred ccceeeeeecceeeccceeeeecCCCCcceEEeccCC-----cEEEEEC
Confidence 7663332111111111222222 456888887654 3566664
No 87
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=84.69 E-value=11 Score=37.24 Aligned_cols=95 Identities=16% Similarity=0.199 Sum_probs=57.1
Q ss_pred EEEECCEEEEEeecCCCCCCcceeEEEECCCC--ceEECCCCCCCC------CCceeEEEEeCCEEEEEecccCCCCCCC
Q 020682 124 AIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDN--KWVDRFDMPKDM------AHSHLGVVSDGRYIYIVSGQYGPQCRGP 195 (322)
Q Consensus 124 ~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~--~W~~~~~~~~p~------~r~~~~~~~~~~~Iyv~GG~~~~~~~~~ 195 (322)
-++.++.||+.... ..++.+|.++- .|+.-...+... .....+.++.+++||+...
T Consensus 66 P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~--------- 129 (689)
T 1yiq_A 66 PIVVDGVMYTTGPF-------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL--------- 129 (689)
T ss_dssp CEEETTEEEEECGG-------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT---------
T ss_pred CEEECCEEEEEcCC-------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc---------
Confidence 34679999998652 35889998754 488643322100 0112245677899998542
Q ss_pred CceEEEEeCCCCc--EEEcCC-CCC--CCCCcEEEEECCEEEEE
Q 020682 196 TSRTFVLDSETRK--WDSIPP-LPS--PRYSPATQLWRGRLHVM 234 (322)
Q Consensus 196 ~~~v~~yd~~t~~--W~~~~~-~p~--~r~~~~~~~~~~~Lyv~ 234 (322)
-..+..+|.+|.+ |+.-.. -+. .....+-++.++.+|+-
T Consensus 130 dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg 173 (689)
T 1yiq_A 130 DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIG 173 (689)
T ss_dssp TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEEC
T ss_pred CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEE
Confidence 2678999998875 886543 111 11222335678888774
No 88
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=84.07 E-value=19 Score=30.69 Aligned_cols=64 Identities=11% Similarity=0.137 Sum_probs=34.6
Q ss_pred CEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEeC---CEEEEEecccCCCCCCCCceEEEEeCC
Q 020682 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDG---RYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~---~~Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
+.+++.|+.+ ..+.++|.++.+|..+..+... ...-.+++... +.+++.|+.+ ..+..||..
T Consensus 67 g~~l~s~s~D------~~v~iWd~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~g~~l~s~s~d--------~~v~~wd~~ 131 (297)
T 2pm7_B 67 GTILASCSYD------GKVMIWKEENGRWSQIAVHAVH-SASVNSVQWAPHEYGPMLLVASSD--------GKVSVVEFK 131 (297)
T ss_dssp CSEEEEEETT------TEEEEEEBSSSCBCCCEEECCC-SSCEEEEEECCGGGCSEEEEEETT--------SEEEEEEBC
T ss_pred CCEEEEEcCC------CEEEEEEcCCCceEEEEEeecC-CCceeEEEeCcCCCCcEEEEEECC--------CcEEEEEec
Confidence 4667777754 3578889988777654433221 11222333321 4566666643 456667765
Q ss_pred CC
Q 020682 206 TR 207 (322)
Q Consensus 206 t~ 207 (322)
+.
T Consensus 132 ~~ 133 (297)
T 2pm7_B 132 EN 133 (297)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 89
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=83.55 E-value=12 Score=33.15 Aligned_cols=63 Identities=8% Similarity=0.039 Sum_probs=32.4
Q ss_pred CEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCCC
Q 020682 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~ 207 (322)
+..++.|+.+ ..+.+||..+.+-...... . ...-.+++.. ++.+++.|+.+ ..+..||..+.
T Consensus 217 ~~~~~~~~~~------g~i~~~d~~~~~~~~~~~~-~--~~~i~~~~~~~~~~~l~~~~~d--------~~i~i~d~~~~ 279 (425)
T 1r5m_A 217 DDKFVIPGPK------GAIFVYQITEKTPTGKLIG-H--HGPISVLEFNDTNKLLLSASDD--------GTLRIWHGGNG 279 (425)
T ss_dssp TTEEEEECGG------GCEEEEETTCSSCSEEECC-C--SSCEEEEEEETTTTEEEEEETT--------SCEEEECSSSB
T ss_pred CCEEEEEcCC------CeEEEEEcCCCceeeeecc-C--CCceEEEEECCCCCEEEEEcCC--------CEEEEEECCCC
Confidence 3345566543 3588999887543221111 1 1122233333 45566666642 46778887765
Q ss_pred c
Q 020682 208 K 208 (322)
Q Consensus 208 ~ 208 (322)
+
T Consensus 280 ~ 280 (425)
T 1r5m_A 280 N 280 (425)
T ss_dssp S
T ss_pred c
Confidence 4
No 90
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=83.05 E-value=20 Score=31.94 Aligned_cols=128 Identities=9% Similarity=0.052 Sum_probs=61.0
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEEE-CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~ 176 (322)
.+..+|..+.+............-.+++.. ++.+++.|+.+ ..+.+||..+.+-....... ...-.++..
T Consensus 114 ~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~---~~~v~~~~~ 184 (401)
T 4aez_A 114 NVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN------GLVDIYDVESQTKLRTMAGH---QARVGCLSW 184 (401)
T ss_dssp EEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT------SCEEEEETTTCCEEEEECCC---SSCEEEEEE
T ss_pred eEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC------CeEEEEECcCCeEEEEecCC---CCceEEEEE
Confidence 455666665554443332211111122211 45666666643 24888998876643322111 112223333
Q ss_pred eCCEEEEEecccCCCCCCCCceEEEEeCCCCc--EEEcCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEee
Q 020682 177 DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK--WDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 177 ~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
++.+++.|+.+ ..+..||..+.. -..+... ......+.+ ++.+++.|+.++ .+..|++
T Consensus 185 -~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~ 246 (401)
T 4aez_A 185 -NRHVLSSGSRS--------GAIHHHDVRIANHQIGTLQGH---SSEVCGLAWRSDGLQLASGGNDN-----VVQIWDA 246 (401)
T ss_dssp -ETTEEEEEETT--------SEEEEEETTSSSCEEEEEECC---SSCEEEEEECTTSSEEEEEETTS-----CEEEEET
T ss_pred -CCCEEEEEcCC--------CCEEEEecccCcceeeEEcCC---CCCeeEEEEcCCCCEEEEEeCCC-----eEEEccC
Confidence 44466666642 577888887432 1111111 111122223 566777887644 3666765
No 91
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=82.41 E-value=10 Score=34.37 Aligned_cols=100 Identities=9% Similarity=0.074 Sum_probs=50.6
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
++.+++.|+.+ ..+.+||..+.+-...-... ...-.+++.. ++.+++.|+.++ .+..||..+
T Consensus 119 ~~~~l~s~s~D------g~i~vwd~~~~~~~~~l~~h---~~~V~~v~~~~~~~~l~sgs~D~--------~i~iwd~~~ 181 (410)
T 1vyh_C 119 VFSVMVSASED------ATIKVWDYETGDFERTLKGH---TDSVQDISFDHSGKLLASCSADM--------TIKLWDFQG 181 (410)
T ss_dssp SSSEEEEEESS------SCEEEEETTTCCCCEEECCC---SSCEEEEEECTTSSEEEEEETTS--------CCCEEETTS
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEEecc---CCcEEEEEEcCCCCEEEEEeCCC--------eEEEEeCCC
Confidence 35677777754 24788898876543221111 1122233333 566777777643 445678776
Q ss_pred CcEEEcCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEee
Q 020682 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
.+-... +..-...-..+.+ ++..++.|+.++ .+..|++
T Consensus 182 ~~~~~~--~~~h~~~V~~v~~~p~~~~l~s~s~D~-----~i~~wd~ 221 (410)
T 1vyh_C 182 FECIRT--MHGHDHNVSSVSIMPNGDHIVSASRDK-----TIKMWEV 221 (410)
T ss_dssp SCEEEC--CCCCSSCEEEEEECSSSSEEEEEETTS-----EEEEEET
T ss_pred CceeEE--EcCCCCCEEEEEEeCCCCEEEEEeCCC-----eEEEEEC
Confidence 543222 2111111122223 456667777643 3666765
No 92
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=82.02 E-value=27 Score=31.12 Aligned_cols=89 Identities=11% Similarity=0.056 Sum_probs=50.9
Q ss_pred eeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEE
Q 020682 146 HVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPAT 224 (322)
Q Consensus 146 ~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~ 224 (322)
.+.+||..+.+......... ...-.+++.. ++.+++.|+.+ ..+..||..+.+-...-. ........
T Consensus 114 ~v~lw~~~~~~~~~~~~~~~--~~~v~~v~~s~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~--~~~~~v~~ 181 (401)
T 4aez_A 114 NVYVWNADSGSVSALAETDE--STYVASVKWSHDGSFLSVGLGN--------GLVDIYDVESQTKLRTMA--GHQARVGC 181 (401)
T ss_dssp EEEEEETTTCCEEEEEECCT--TCCEEEEEECTTSSEEEEEETT--------SCEEEEETTTCCEEEEEC--CCSSCEEE
T ss_pred eEEEeeCCCCcEeEeeecCC--CCCEEEEEECCCCCEEEEECCC--------CeEEEEECcCCeEEEEec--CCCCceEE
Confidence 58889998887665544432 2222334443 55566666642 467889988776443322 11222334
Q ss_pred EEECCEEEEEeccCCCCCCCCcceEee
Q 020682 225 QLWRGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 225 ~~~~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
+.+++.+++.|+.++ .+..|++
T Consensus 182 ~~~~~~~l~~~~~dg-----~i~i~d~ 203 (401)
T 4aez_A 182 LSWNRHVLSSGSRSG-----AIHHHDV 203 (401)
T ss_dssp EEEETTEEEEEETTS-----EEEEEET
T ss_pred EEECCCEEEEEcCCC-----CEEEEec
Confidence 455777777777654 3566664
No 93
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=81.89 E-value=26 Score=30.70 Aligned_cols=106 Identities=10% Similarity=-0.056 Sum_probs=54.0
Q ss_pred ECCEEEEEeecCCCCCCcceeEEEECCCCc----eEECCCCCCCCCCceeEEEEe-C----C---EEEEEecccCCCCCC
Q 020682 127 IKNLFYVFAGYGSLDYVHSHVDVYNFTDNK----WVDRFDMPKDMAHSHLGVVSD-G----R---YIYIVSGQYGPQCRG 194 (322)
Q Consensus 127 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~----W~~~~~~~~p~~r~~~~~~~~-~----~---~Iyv~GG~~~~~~~~ 194 (322)
....+++.|+.+ ..+.+||..+.+ +..+..+... ...-.+++.. + + .+++.|+.+
T Consensus 24 ~~~~~l~s~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~g~~~~~l~s~~~d------ 90 (397)
T 1sq9_A 24 ACNSFTVSCSGD------GYLKVWDNKLLDNENPKDKSYSHFVH-KSGLHHVDVLQAIERDAFELCLVATTSFS------ 90 (397)
T ss_dssp ECSSEEEEEETT------SEEEEEESBCCTTCCGGGGEEEEECC-TTCEEEEEEEEEEETTTEEEEEEEEEETT------
T ss_pred ecCCeEEEEcCC------CEEEEEECCCcccccCCCcceEEecC-CCcEEEEEEecccccCCccccEEEEEcCC------
Confidence 344666677653 357888888765 2111111110 1112233333 4 5 677777653
Q ss_pred CCceEEEEeCCCCc------EEEcCCCCCC---CCCcEEEEE-----CCEE-EEEeccCCCCCCCCcceEeee
Q 020682 195 PTSRTFVLDSETRK------WDSIPPLPSP---RYSPATQLW-----RGRL-HVMGGSKENRHTPGLEHWSIA 252 (322)
Q Consensus 195 ~~~~v~~yd~~t~~------W~~~~~~p~~---r~~~~~~~~-----~~~L-yv~GG~~~~~~~~~~~~~~~~ 252 (322)
..+..||..+.. +..+...+.. ..-..+... ++.+ ++.|+.++ .+..|++.
T Consensus 91 --g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~ 156 (397)
T 1sq9_A 91 --GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG-----TTYIWKFH 156 (397)
T ss_dssp --SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTS-----CEEEEEEE
T ss_pred --CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCC-----cEEEEeCC
Confidence 457778877766 7776544311 111222222 4556 77777643 47777764
No 94
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=81.71 E-value=23 Score=30.34 Aligned_cols=67 Identities=7% Similarity=0.044 Sum_probs=35.8
Q ss_pred CEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEeC----CEEEEEecccCCCCCCCCceEEEEeC
Q 020682 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDG----RYIYIVSGQYGPQCRGPTSRTFVLDS 204 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~----~~Iyv~GG~~~~~~~~~~~~v~~yd~ 204 (322)
..+++.|+.+... ..+.+||..+.+......... ...-.+++... +.+++.|+.+ ..+..||.
T Consensus 31 ~~l~~~~s~~~~d---~~v~iw~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~l~~~~~d--------g~i~iwd~ 97 (357)
T 3i2n_A 31 AKFVTMGNFARGT---GVIQLYEIQHGDLKLLREIEK--AKPIKCGTFGATSLQQRYLATGDFG--------GNLHIWNL 97 (357)
T ss_dssp SEEEEEEC--CCC---EEEEEEEECSSSEEEEEEEEE--SSCEEEEECTTCCTTTCCEEEEETT--------SCEEEECT
T ss_pred ceEEEecCccCCC---cEEEEEeCCCCcccceeeecc--cCcEEEEEEcCCCCCCceEEEecCC--------CeEEEEeC
Confidence 4666666542111 358888988877654332222 11222333332 3666667643 45778888
Q ss_pred CCCc
Q 020682 205 ETRK 208 (322)
Q Consensus 205 ~t~~ 208 (322)
.+.+
T Consensus 98 ~~~~ 101 (357)
T 3i2n_A 98 EAPE 101 (357)
T ss_dssp TSCS
T ss_pred CCCC
Confidence 7654
No 95
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=81.66 E-value=20 Score=32.19 Aligned_cols=95 Identities=13% Similarity=0.114 Sum_probs=52.4
Q ss_pred CCEEECCCCCCCCcccEEEEE---CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCC---CCCCCC-------ceeE
Q 020682 107 LEWEQMPSAPVPRLDGAAIQI---KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDM---PKDMAH-------SHLG 173 (322)
Q Consensus 107 ~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~---~~p~~r-------~~~~ 173 (322)
.+|+...+.+....-++++.. .+.||+.+.....+ .-+++.+-...+|+.+... +....+ .-.+
T Consensus 43 ~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g---~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~ 119 (394)
T 3b7f_A 43 RTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLG---PTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFW 119 (394)
T ss_dssp CSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CC---EEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEE
T ss_pred CCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCC---ccEEEeCCCCCCceECCccccCCCcccccccccccceeE
Confidence 689876421211222333333 46788876432111 2477777778899987642 211011 1223
Q ss_pred EEEe----CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcC
Q 020682 174 VVSD----GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP 213 (322)
Q Consensus 174 ~~~~----~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~ 213 (322)
+++. .+.||+.+. ..-+++.+....+|+.+.
T Consensus 120 l~~~~~~~~~~l~~g~~---------~ggl~~S~DgG~tW~~~~ 154 (394)
T 3b7f_A 120 LTPGHASEPGTWYAGTS---------PQGLFRSTDHGASWEPVA 154 (394)
T ss_dssp EEECCTTSTTCEEEEEE---------TTEEEEESSTTSBCEECH
T ss_pred EEeCCCCCCCEEEEEec---------CCcEEEEcCCCCCeEECc
Confidence 4443 577887542 256788888888999885
No 96
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=81.63 E-value=14 Score=33.40 Aligned_cols=100 Identities=9% Similarity=0.040 Sum_probs=49.8
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
++++++.|+.++ .+.+||..+.+-.. .+... ...-.+++.. ++..++.|+.+ ..+..||..+
T Consensus 161 ~~~~l~sgs~D~------~i~iwd~~~~~~~~--~~~~h-~~~V~~v~~~p~~~~l~s~s~D--------~~i~~wd~~~ 223 (410)
T 1vyh_C 161 SGKLLASCSADM------TIKLWDFQGFECIR--TMHGH-DHNVSSVSIMPNGDHIVSASRD--------KTIKMWEVQT 223 (410)
T ss_dssp TSSEEEEEETTS------CCCEEETTSSCEEE--CCCCC-SSCEEEEEECSSSSEEEEEETT--------SEEEEEETTT
T ss_pred CCCEEEEEeCCC------eEEEEeCCCCceeE--EEcCC-CCCEEEEEEeCCCCEEEEEeCC--------CeEEEEECCC
Confidence 456777777542 35667876644322 22211 1122233333 45556666643 5678899887
Q ss_pred CcEEEcCCCCCCCCCcEEEE--ECCEEEEEeccCCCCCCCCcceEee
Q 020682 207 RKWDSIPPLPSPRYSPATQL--WRGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~--~~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
..-...-.. .......+. -++.+++.|+.++ .+..|++
T Consensus 224 ~~~~~~~~~--h~~~v~~~~~~~~g~~l~s~s~D~-----~v~vwd~ 263 (410)
T 1vyh_C 224 GYCVKTFTG--HREWVRMVRPNQDGTLIASCSNDQ-----TVRVWVV 263 (410)
T ss_dssp CCEEEEEEC--CSSCEEEEEECTTSSEEEEEETTS-----CEEEEET
T ss_pred CcEEEEEeC--CCccEEEEEECCCCCEEEEEcCCC-----eEEEEEC
Confidence 764322111 111111222 2456777777654 3556654
No 97
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=81.59 E-value=6.9 Score=35.73 Aligned_cols=104 Identities=11% Similarity=0.008 Sum_probs=55.6
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
++.+++.|+.++ .+.++|..+..-......... ...-.+++.. ++.+++.|+.+ ..+..+|.+
T Consensus 131 ~~~~lasGs~dg------~i~lWd~~~~~~~~~~~~~gH-~~~V~~l~f~p~~~~~l~s~s~D--------~~v~iwd~~ 195 (435)
T 4e54_B 131 HPSTVAVGSKGG------DIMLWNFGIKDKPTFIKGIGA-GGSITGLKFNPLNTNQFYASSME--------GTTRLQDFK 195 (435)
T ss_dssp CTTCEEEEETTS------CEEEECSSCCSCCEEECCCSS-SCCCCEEEECSSCTTEEEEECSS--------SCEEEEETT
T ss_pred CCCEEEEEeCCC------EEEEEECCCCCceeEEEccCC-CCCEEEEEEeCCCCCEEEEEeCC--------CEEEEeecc
Confidence 456777887542 478888876654332222111 1122344443 45566666653 456778988
Q ss_pred CCcEEEcCCCCCC-CCCcEE-EEECCEEEEEeccCCCCCCCCcceEee
Q 020682 206 TRKWDSIPPLPSP-RYSPAT-QLWRGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 206 t~~W~~~~~~p~~-r~~~~~-~~~~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
++.-..+...... ....++ ..-++++++.|+.++ .+..|++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg-----~i~~wd~ 238 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVG-----NVILLNM 238 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSS-----BEEEEES
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCC-----cEeeecc
Confidence 8766555322211 111222 233567788887654 3666764
No 98
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=81.46 E-value=31 Score=31.23 Aligned_cols=135 Identities=5% Similarity=-0.005 Sum_probs=66.4
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~ 207 (322)
++..++.|+.+ ..+.+||..+.+-.. .+... ...-.++.. ++..++.|+.+ ..+..||+.+.
T Consensus 321 ~~~~l~sg~~d------g~i~vwd~~~~~~~~--~~~~h-~~~v~~~~~-~~~~l~s~s~d--------g~v~vwd~~~~ 382 (464)
T 3v7d_B 321 ERKRCISASMD------TTIRIWDLENGELMY--TLQGH-TALVGLLRL-SDKFLVSAAAD--------GSIRGWDANDY 382 (464)
T ss_dssp TTTEEEEEETT------SCEEEEETTTTEEEE--EECCC-SSCEEEEEE-CSSEEEEEETT--------SEEEEEETTTC
T ss_pred CCCEEEEEeCC------CcEEEEECCCCcEEE--EEeCC-CCcEEEEEE-cCCEEEEEeCC--------CcEEEEECCCC
Confidence 45566666643 248889988765322 22211 111223333 44555666542 56888998876
Q ss_pred cEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccCCCCCcCceeEEEECCEEEE
Q 020682 208 KWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFV 287 (322)
Q Consensus 208 ~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~lyv 287 (322)
.-..... ............++++++.|+ ++ .+..|+++ +++-......+....-..+...++.+++
T Consensus 383 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg-----~i~iwd~~-------~g~~~~~~~~~~~~~v~~v~~~~~~l~~ 448 (464)
T 3v7d_B 383 SRKFSYH-HTNLSAITTFYVSDNILVSGS-EN-----QFNIYNLR-------SGKLVHANILKDADQIWSVNFKGKTLVA 448 (464)
T ss_dssp CEEEEEE-CTTCCCEEEEEECSSEEEEEE-TT-----EEEEEETT-------TCCEEESCTTTTCSEEEEEEEETTEEEE
T ss_pred ceeeeec-CCCCccEEEEEeCCCEEEEec-CC-----eEEEEECC-------CCcEEehhhccCCCcEEEEEecCCEEEE
Confidence 5222211 111222334456777777776 32 36777753 4433322112222222244445666766
Q ss_pred EecCCCC
Q 020682 288 VGGQEGD 294 (322)
Q Consensus 288 ~GG~~~~ 294 (322)
.++.++.
T Consensus 449 ~~~~~g~ 455 (464)
T 3v7d_B 449 AVEKDGQ 455 (464)
T ss_dssp EEEETTE
T ss_pred EEEeCCe
Confidence 6665544
No 99
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=81.26 E-value=7.3 Score=33.54 Aligned_cols=131 Identities=10% Similarity=0.010 Sum_probs=65.0
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEE--ECCEEEEEeecCCCCCCcceeEEEECCCCce-EE-CCCCCCCCCCceeE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQ--IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKW-VD-RFDMPKDMAHSHLG 173 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W-~~-~~~~~~p~~r~~~~ 173 (322)
.+..+|..+.+....-..+.. ...++. -++.+|+.+..+ ..++++|+++.+- .. +..... ++...+
T Consensus 21 ~v~~~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~ 90 (331)
T 3u4y_A 21 RISFFSTDTLEILNQITLGYD--FVDTAITSDCSNVVVTSDFC------QTLVQIETQLEPPKVVAIQEGQS--SMADVD 90 (331)
T ss_dssp EEEEEETTTCCEEEEEECCCC--EEEEEECSSSCEEEEEESTT------CEEEEEECSSSSCEEEEEEECSS--CCCCEE
T ss_pred eEEEEeCcccceeeeEEccCC--cceEEEcCCCCEEEEEeCCC------CeEEEEECCCCceeEEecccCCC--CccceE
Confidence 567777777766544333221 112222 244577776532 2689999988774 22 222222 222122
Q ss_pred EEEeCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEE-CC-EEEEEeccCCCCCCCC-cceEe
Q 020682 174 VVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RG-RLHVMGGSKENRHTPG-LEHWS 250 (322)
Q Consensus 174 ~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~-~Lyv~GG~~~~~~~~~-~~~~~ 250 (322)
....++.|| .+...+. ...+.+||+.+.+-...-+. ....+.++.- ++ .||+.+... .. +..|+
T Consensus 91 ~s~dg~~l~-~~~~~~~-----~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~-----~~~i~~~~ 157 (331)
T 3u4y_A 91 ITPDDQFAV-TVTGLNH-----PFNMQSYSFLKNKFISTIPI--PYDAVGIAISPNGNGLILIDRSS-----ANTVRRFK 157 (331)
T ss_dssp ECTTSSEEE-ECCCSSS-----SCEEEEEETTTTEEEEEEEC--CTTEEEEEECTTSSCEEEEEETT-----TTEEEEEE
T ss_pred ECCCCCEEE-EecCCCC-----cccEEEEECCCCCeEEEEEC--CCCccceEECCCCCEEEEEecCC-----CceEEEEE
Confidence 222355677 3322110 13899999998876543222 1111233332 44 477765532 23 55666
Q ss_pred e
Q 020682 251 I 251 (322)
Q Consensus 251 ~ 251 (322)
+
T Consensus 158 ~ 158 (331)
T 3u4y_A 158 I 158 (331)
T ss_dssp E
T ss_pred E
Confidence 4
No 100
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=81.16 E-value=35 Score=31.73 Aligned_cols=183 Identities=13% Similarity=0.099 Sum_probs=99.3
Q ss_pred CCEEE--CCCCCCCCcccEEEEECCEEEEEeecCCCCCCcc-eeEEEE----CCCCce-EECCCCCCCCCCceeEEEEeC
Q 020682 107 LEWEQ--MPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHS-HVDVYN----FTDNKW-VDRFDMPKDMAHSHLGVVSDG 178 (322)
Q Consensus 107 ~~W~~--~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~-~v~~yd----~~~~~W-~~~~~~~~p~~r~~~~~~~~~ 178 (322)
..|++ ++.+|..-.-|+.|.+++.-|++|=.++.-..+. -+..|. .-...- ++++.--.+ .-+-.++-..+
T Consensus 270 spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~-~AsEPCvkyYd 348 (670)
T 3ju4_A 270 SPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYEP-DASEPCIKYYD 348 (670)
T ss_dssp SCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGGCT-TEEEEEEEEET
T ss_pred CCceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhhcc-ccccchhhhhC
Confidence 45654 4555544457888999998889986544332221 122221 111111 223222111 33455666789
Q ss_pred CEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcC-CCCCCCCCcEEEEECCEEEEEeccCC----------CCCC---C
Q 020682 179 RYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP-PLPSPRYSPATQLWRGRLHVMGGSKE----------NRHT---P 244 (322)
Q Consensus 179 ~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~-~~p~~r~~~~~~~~~~~Lyv~GG~~~----------~~~~---~ 244 (322)
+.||+.--....... -+.+.+=+..-..|+.+. |-..-....-.+..++.||+||-... .+|. +
T Consensus 349 gvLyLtTRgt~~~~~--GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsERA~nEWE~G~pD~RY~a~yP 426 (670)
T 3ju4_A 349 GVLYLITRGTRGDRL--GSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSERAENEWEAGAPDDRYKASYP 426 (670)
T ss_dssp TEEEEEEEESCTTSC--CCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEECSSTTCSSTTCCCCCSSCBCC
T ss_pred CEEEEEecCcCCCCC--cceeeeecccCCchhheeccccccccCCCcceeCCEEEEEeccccccccccCCCcccccccCC
Confidence 999998633322221 377888888888899874 22222334445788999999996421 1111 1
Q ss_pred CcceEeeeeeccccccCceEeccC------CCCCcCce-eEEEECCEEE-EEecCC
Q 020682 245 GLEHWSIAVKDGKALEKAWRTEIP------IPRGGPHR-ACFVFNDRLF-VVGGQE 292 (322)
Q Consensus 245 ~~~~~~~~v~~~~~~~~~W~~~~~------~p~~~~~~-~~~~~~~~ly-v~GG~~ 292 (322)
....-.+.+-++..+.-+|..+.. +.....+. ++|+-++-|| ||||.+
T Consensus 427 RtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd 482 (670)
T 3ju4_A 427 RTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGED 482 (670)
T ss_dssp EEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBC
T ss_pred ceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCcc
Confidence 122223344455555777877633 23333333 4455677764 888855
No 101
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=81.12 E-value=36 Score=31.81 Aligned_cols=134 Identities=9% Similarity=0.064 Sum_probs=69.4
Q ss_pred CEEEEEeec-CCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 129 NLFYVFAGY-GSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 129 ~~lyv~GG~-~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
++.++.|+. + ..+.+||..+.+... ..+... ...-.+++.. ++++++.|+.+ ..+..||..+
T Consensus 456 ~~~l~~~~~~d------~~i~~~~~~~~~~~~-~~~~~~-~~~v~~~~~s~~g~~l~~~~~d--------g~i~iw~~~~ 519 (615)
T 1pgu_A 456 QNYVAVGLEEG------NTIQVFKLSDLEVSF-DLKTPL-RAKPSYISISPSETYIAAGDVM--------GKILLYDLQS 519 (615)
T ss_dssp SSEEEEEETTT------SCEEEEETTEEEEEE-ECSSCC-SSCEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CCEEEEeecCC------CeEEEEECCCccccc-cccCCc-cCceEEEEECCCCCEEEEcCCC--------CeEEEeeCCC
Confidence 455555553 2 248889988766542 222211 1122233333 66677777643 5678899987
Q ss_pred CcEEEcCCCCC-CCCCcEEEEE------------CCEEEEEeccCCCCCCCCcceEeeeeeccccccC--ceEeccCCCC
Q 020682 207 RKWDSIPPLPS-PRYSPATQLW------------RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEK--AWRTEIPIPR 271 (322)
Q Consensus 207 ~~W~~~~~~p~-~r~~~~~~~~------------~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~--~W~~~~~~p~ 271 (322)
.+-... +.. ....-..+.+ ++++++.|+.++ .+..|+++ +. ....+.. ..
T Consensus 520 ~~~~~~--~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg-----~i~iw~~~-------~~~~~~~~~~~-h~ 584 (615)
T 1pgu_A 520 REVKTS--RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDT-----NIFIYSVK-------RPMKIIKALNA-HK 584 (615)
T ss_dssp TEEEEC--CSCCCSSCEEEEEECCCC------CCSCCEEEEEETTS-----CEEEEESS-------CTTCCEEETTS-ST
T ss_pred CcceeE--eecCCCCceeEEEEcCccccccccccCCCEEEEEcCCC-----cEEEEECC-------CCceechhhhc-Cc
Confidence 654332 221 1122223333 677888887654 47777753 32 2222211 12
Q ss_pred CcCceeEEEECCEEEEEecCCCC
Q 020682 272 GGPHRACFVFNDRLFVVGGQEGD 294 (322)
Q Consensus 272 ~~~~~~~~~~~~~lyv~GG~~~~ 294 (322)
.........-+++ ++.||.++.
T Consensus 585 ~~v~~l~~s~~~~-l~s~~~d~~ 606 (615)
T 1pgu_A 585 DGVNNLLWETPST-LVSSGADAC 606 (615)
T ss_dssp TCEEEEEEEETTE-EEEEETTSC
T ss_pred cceEEEEEcCCCC-eEEecCCce
Confidence 2222233445788 888887764
No 102
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=80.85 E-value=28 Score=30.47 Aligned_cols=111 Identities=6% Similarity=0.004 Sum_probs=57.8
Q ss_pred CCCEEECCCC-CCCCc-ccEEEEECCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCC-CCCCCceeEEEE-eCCEE
Q 020682 106 DLEWEQMPSA-PVPRL-DGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMP-KDMAHSHLGVVS-DGRYI 181 (322)
Q Consensus 106 ~~~W~~~~~~-p~~r~-~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~-~p~~r~~~~~~~-~~~~I 181 (322)
..+|+.+... +.+.. ...+....+.+|+.|.. ..+++-+=.-++|+.+.... .| .. ...++. .++.+
T Consensus 65 G~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~-------g~i~~S~DgG~tW~~~~~~~~~~-~~-~~~i~~~~~~~~ 135 (327)
T 2xbg_A 65 GQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEP-------PIMLHTTDGGQSWSQIPLDPKLP-GS-PRLIKALGNGSA 135 (327)
T ss_dssp TSSCEECCCCCSCCCCEEEEEEEETTEEEEEEET-------TEEEEESSTTSSCEECCCCTTCS-SC-EEEEEEEETTEE
T ss_pred CCCCeECCCCCCCCCccEEEEEecCCeEEEEECC-------CeEEEECCCCCCceECccccCCC-CC-eEEEEEECCCCE
Confidence 4589988542 22222 23334456788887532 13444333357899976432 22 12 233433 46888
Q ss_pred EEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEE-CCEEEEEe
Q 020682 182 YIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMG 235 (322)
Q Consensus 182 yv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~Lyv~G 235 (322)
|+.|.. ..+++-+-.-.+|+.+...... ..+.++.. ++++|++|
T Consensus 136 ~~~~~~---------g~v~~S~DgG~tW~~~~~~~~~-~~~~~~~~~~~~~~~~g 180 (327)
T 2xbg_A 136 EMITNV---------GAIYRTKDSGKNWQALVQEAIG-VMRNLNRSPSGEYVAVS 180 (327)
T ss_dssp EEEETT---------CCEEEESSTTSSEEEEECSCCC-CEEEEEECTTSCEEEEE
T ss_pred EEEeCC---------ccEEEEcCCCCCCEEeecCCCc-ceEEEEEcCCCcEEEEE
Confidence 887641 2344444445689998643222 22333333 45666665
No 103
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=80.75 E-value=7.2 Score=34.68 Aligned_cols=106 Identities=10% Similarity=0.125 Sum_probs=52.7
Q ss_pred CEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCC---CCceeEEEEe-C-CEEEEEecccCCCCCCCCceEEEEe
Q 020682 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDM---AHSHLGVVSD-G-RYIYIVSGQYGPQCRGPTSRTFVLD 203 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~---~r~~~~~~~~-~-~~Iyv~GG~~~~~~~~~~~~v~~yd 203 (322)
+.+++.|+.+ ..+.+||..+.+-........+. ...-.+++.. + ..+++.|+.++. ...+..||
T Consensus 178 ~~~l~~~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-----~~~i~~~d 246 (416)
T 2pm9_A 178 AHVFASAGSS------NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN-----DPSILIWD 246 (416)
T ss_dssp TTEEEEESSS------SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS-----SCCCCEEE
T ss_pred CcEEEEEcCC------CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC-----CceEEEEe
Confidence 5677777643 34888999877654322222100 1122333443 2 357777765431 13677888
Q ss_pred CCCCcEEEcCCCC-CCCCCcEEEEE---CCEEEEEeccCCCCCCCCcceEee
Q 020682 204 SETRKWDSIPPLP-SPRYSPATQLW---RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 204 ~~t~~W~~~~~~p-~~r~~~~~~~~---~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
..+.. ..+..+. ........+.+ ++++++.|+.++ .+..|++
T Consensus 247 ~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg-----~v~~wd~ 292 (416)
T 2pm9_A 247 LRNAN-TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN-----TVLLWNP 292 (416)
T ss_dssp TTSTT-SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS-----EEEEECS
T ss_pred CCCCC-CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCC-----CEEEeeC
Confidence 88753 1111222 11112222333 567777887644 3566664
No 104
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=80.66 E-value=15 Score=35.71 Aligned_cols=98 Identities=12% Similarity=0.188 Sum_probs=55.7
Q ss_pred EEEEECCEEEEEeecCCCCCCcceeEEEEC-CCC--ceEECCCCCCC---CC---CceeEEEE--eCCE----EEEEecc
Q 020682 123 AAIQIKNLFYVFAGYGSLDYVHSHVDVYNF-TDN--KWVDRFDMPKD---MA---HSHLGVVS--DGRY----IYIVSGQ 187 (322)
Q Consensus 123 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~-~~~--~W~~~~~~~~p---~~---r~~~~~~~--~~~~----Iyv~GG~ 187 (322)
.-++.++.||+.... ...++.+|. ++- .|+.-...... .. ....+.++ .+++ ||+...
T Consensus 57 tP~v~~g~vyv~~~~------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~- 129 (599)
T 1w6s_A 57 APLVVDGKMYIHTSF------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL- 129 (599)
T ss_dssp CCEEETTEEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-
T ss_pred ccEEECCEEEEEeCC------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-
Confidence 345679999998752 135889998 544 48874433210 00 11223455 6777 887532
Q ss_pred cCCCCCCCCceEEEEeCCCCc--EEEcCCCCC-C-CCCcEEEEECCEEEEEe
Q 020682 188 YGPQCRGPTSRTFVLDSETRK--WDSIPPLPS-P-RYSPATQLWRGRLHVMG 235 (322)
Q Consensus 188 ~~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~-~-r~~~~~~~~~~~Lyv~G 235 (322)
-..+..+|.+|.+ |+.-..-+. . ....+-++.++++|+-.
T Consensus 130 --------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~ 173 (599)
T 1w6s_A 130 --------DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGS 173 (599)
T ss_dssp --------TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECC
T ss_pred --------CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEe
Confidence 2678999998876 885422111 0 11222345688887643
No 105
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=80.48 E-value=14 Score=31.79 Aligned_cols=95 Identities=7% Similarity=0.057 Sum_probs=53.1
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
+++||+.+..+ ..+++||+++.+...+.... ...-.+++.. ++++|+........ ...++.||+++
T Consensus 55 ~g~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~---~~~~~~i~~~~dg~l~v~~~~~~~~----~~~i~~~d~~~ 121 (333)
T 2dg1_A 55 QGQLFLLDVFE------GNIFKINPETKEIKRPFVSH---KANPAAIKIHKDGRLFVCYLGDFKS----TGGIFAATENG 121 (333)
T ss_dssp TSCEEEEETTT------CEEEEECTTTCCEEEEEECS---SSSEEEEEECTTSCEEEEECTTSSS----CCEEEEECTTS
T ss_pred CCCEEEEECCC------CEEEEEeCCCCcEEEEeeCC---CCCcceEEECCCCcEEEEeCCCCCC----CceEEEEeCCC
Confidence 56788876532 35899999988876643221 1223445554 67788876432111 25799999988
Q ss_pred CcEEEc-CCCCCCCCCcEEEE-ECCEEEEEe
Q 020682 207 RKWDSI-PPLPSPRYSPATQL-WRGRLHVMG 235 (322)
Q Consensus 207 ~~W~~~-~~~p~~r~~~~~~~-~~~~Lyv~G 235 (322)
..-..+ ........-..++. -+++||+..
T Consensus 122 ~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 152 (333)
T 2dg1_A 122 DNLQDIIEDLSTAYCIDDMVFDSKGGFYFTD 152 (333)
T ss_dssp CSCEEEECSSSSCCCEEEEEECTTSCEEEEE
T ss_pred CEEEEEEccCccCCcccceEECCCCCEEEEe
Confidence 775533 32211111112222 256788754
No 106
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=80.44 E-value=13 Score=32.05 Aligned_cols=69 Identities=12% Similarity=0.171 Sum_probs=36.8
Q ss_pred CEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-C--CEEEEEecccCCCCCCCCceEEEEeCC
Q 020682 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-G--RYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~--~~Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
+.+++.|+.+ ..+.++|.++.+|.....+... ...-.+++.. + +.+++.|+.+ ..+..+|..
T Consensus 71 ~~~l~s~s~D------~~v~iWd~~~~~~~~~~~~~~h-~~~V~~v~~~p~~~g~~lasgs~D--------~~i~lwd~~ 135 (316)
T 3bg1_A 71 GNILASCSYD------RKVIIWREENGTWEKSHEHAGH-DSSVNSVCWAPHDYGLILACGSSD--------GAISLLTYT 135 (316)
T ss_dssp SSCEEEEETT------SCEEEECCSSSCCCEEEEECCC-SSCCCEEEECCTTTCSCEEEECSS--------SCEEEEEEC
T ss_pred CCEEEEEECC------CEEEEEECCCCcceEEEEccCC-CCceEEEEECCCCCCcEEEEEcCC--------CCEEEEecC
Confidence 4566667654 2478889888777554332211 1111233333 2 5566667653 345667766
Q ss_pred CC-cEEEc
Q 020682 206 TR-KWDSI 212 (322)
Q Consensus 206 t~-~W~~~ 212 (322)
+. .|...
T Consensus 136 ~~~~~~~~ 143 (316)
T 3bg1_A 136 GEGQWEVK 143 (316)
T ss_dssp SSSCEEEC
T ss_pred CCCCccee
Confidence 54 56543
No 107
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=80.10 E-value=13 Score=31.84 Aligned_cols=68 Identities=13% Similarity=0.226 Sum_probs=41.8
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
++++|+.++.+ ..++++|+.+.+....-..+. ......+++. ++.+|+.+.. ...+..||+.
T Consensus 10 ~~~~~v~~~~~------~~v~~~d~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~~~v~~~~--------~~~i~~~d~~ 73 (349)
T 1jmx_B 10 GHEYMIVTNYP------NNLHVVDVASDTVYKSCVMPD--KFGPGTAMMAPDNRTAYVLNNH--------YGDIYGIDLD 73 (349)
T ss_dssp TCEEEEEEETT------TEEEEEETTTTEEEEEEECSS--CCSSCEEEECTTSSEEEEEETT--------TTEEEEEETT
T ss_pred CCEEEEEeCCC------CeEEEEECCCCcEEEEEecCC--CCCCceeEECCCCCEEEEEeCC--------CCcEEEEeCC
Confidence 67888887742 468999998876543322222 0012234443 4568887632 3678999999
Q ss_pred CCcEEE
Q 020682 206 TRKWDS 211 (322)
Q Consensus 206 t~~W~~ 211 (322)
+.+-..
T Consensus 74 t~~~~~ 79 (349)
T 1jmx_B 74 TCKNTF 79 (349)
T ss_dssp TTEEEE
T ss_pred CCcEEE
Confidence 887553
No 108
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=79.89 E-value=35 Score=33.88 Aligned_cols=175 Identities=13% Similarity=0.141 Sum_probs=88.2
Q ss_pred hccccccCCCCEEECCCCCCC-Cc-ccEEEE-ECCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEE
Q 020682 98 TFADLPAPDLEWEQMPSAPVP-RL-DGAAIQ-IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGV 174 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~-r~-~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~ 174 (322)
.+..||..+.+.+.+...... .. -..++. -++.|++... ..+++||++++++...... .+....-.++
T Consensus 108 Gl~~yd~~~~~f~~~~~~~~~~~~~i~~i~~d~~g~lwi~t~--------~gl~~~~~~~~~~~~~~~~-~~~~~~i~~i 178 (795)
T 4a2l_A 108 GLSRYDEEKDIFQNFFYEKNGKHLQVNGIEEISPEQLLISTP--------EGLIMFDIKESKFIDDSFS-TAMHKTIAST 178 (795)
T ss_dssp CEEEEETTTTEEEEECCEETTEECCCCEEEEEETTEEEEEET--------TEEEEEETTTTEEECSSSC-HHHHTCCEEE
T ss_pred chheeCCCCCeEEeccccccCCCceEEEEEECCCCCEEEEEC--------CceEEEECCCCEEEeccCC-CCCCcceEEE
Confidence 467888877777665432111 11 122222 3678887543 2489999998887765431 1001101233
Q ss_pred EE-eCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEE-EECCEEEEEeccCCCCCCCCcceEeee
Q 020682 175 VS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQ-LWRGRLHVMGGSKENRHTPGLEHWSIA 252 (322)
Q Consensus 175 ~~-~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~-~~~~~Lyv~GG~~~~~~~~~~~~~~~~ 252 (322)
.. .++.|||... ...+++||++++++......+....-.++. .-++.|++..-. ..+.+|+
T Consensus 179 ~~d~~g~lwigt~---------~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~------~Gl~~~~-- 241 (795)
T 4a2l_A 179 LYRQGDQIYIGTS---------TDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATEG------AGLFLIN-- 241 (795)
T ss_dssp EEEETTEEEEEES---------SSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEBS------SCEEEEE--
T ss_pred EECCCCCEEEEEC---------CCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEECC------CCeEEEe--
Confidence 33 3788998321 146889999999998875332221112222 236777764211 1244554
Q ss_pred eeccccccCceEeccC-------CCCCcCceeEEEE-CCEEEEEecCCCCCCCCCCCCeee
Q 020682 253 VKDGKALEKAWRTEIP-------IPRGGPHRACFVF-NDRLFVVGGQEGDFMAKPGSPIFK 305 (322)
Q Consensus 253 v~~~~~~~~~W~~~~~-------~p~~~~~~~~~~~-~~~lyv~GG~~~~~~~~p~~~~~~ 305 (322)
+.++++..... ++.... .++..- ++.|+|-. .+|...+++....+.
T Consensus 242 -----~~~~~~~~~~~~~~~~~~l~~~~i-~~i~~d~~g~lWigt-~~Gl~~~~~~~~~~~ 295 (795)
T 4a2l_A 242 -----PKTKEIKNYLHSPSNPKSISSNYI-RSLAMDSQNRLWIGT-FNDLNIYHEGTDSFA 295 (795)
T ss_dssp -----TTTTEEEEECCCTTCTTSCSCSBE-EEEEECTTSCEEEEE-SSCEEEEETTTTEEE
T ss_pred -----CCCCeEEEeecCCCCccccCCCeE-EEEEEcCCCCEEEEe-CChhheEcCCCCeEE
Confidence 44666655422 122222 122222 55666544 345556666554443
No 109
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=79.81 E-value=13 Score=32.03 Aligned_cols=100 Identities=12% Similarity=0.072 Sum_probs=52.9
Q ss_pred CEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCCC
Q 020682 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~ 207 (322)
+.+++.|+.+ ..+.+||..+........+... ...-.+++.. ++..++.|+.+ ..+..||..+.
T Consensus 54 g~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~d--------g~v~iwd~~~~ 118 (368)
T 3mmy_A 54 GNFLIAGSWA------NDVRCWEVQDSGQTIPKAQQMH-TGPVLDVCWSDDGSKVFTASCD--------KTAKMWDLSSN 118 (368)
T ss_dssp SEEEEEEETT------SEEEEEEECTTSCEEEEEEEEC-SSCEEEEEECTTSSEEEEEETT--------SEEEEEETTTT
T ss_pred ceEEEEECCC------CcEEEEEcCCCCceeEEEeccc-cCCEEEEEECcCCCEEEEEcCC--------CcEEEEEcCCC
Confidence 3777777754 3478888876433321111110 1122233333 55555566542 57888999988
Q ss_pred cEEEcCCCCCCCCCcEEEE----ECCEEEEEeccCCCCCCCCcceEee
Q 020682 208 KWDSIPPLPSPRYSPATQL----WRGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 208 ~W~~~~~~p~~r~~~~~~~----~~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
+-..+.....+ ...+. -++.+++.|+.++ .+..|++
T Consensus 119 ~~~~~~~~~~~---v~~~~~~~~~~~~~l~~~~~dg-----~i~vwd~ 158 (368)
T 3mmy_A 119 QAIQIAQHDAP---VKTIHWIKAPNYSCVMTGSWDK-----TLKFWDT 158 (368)
T ss_dssp EEEEEEECSSC---EEEEEEEECSSCEEEEEEETTS-----EEEEECS
T ss_pred CceeeccccCc---eEEEEEEeCCCCCEEEEccCCC-----cEEEEEC
Confidence 76654322111 12222 2567777877654 3566664
No 110
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=79.58 E-value=18 Score=29.67 Aligned_cols=92 Identities=17% Similarity=0.202 Sum_probs=52.7
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCce-EECCC--CCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKW-VDRFD--MPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W-~~~~~--~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~ 204 (322)
++++|+|-| +.+|+|+..+-.- +.+.. +|.......++....++++|+|-| +..+.||.
T Consensus 64 ~~~~yfFkG--------~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg----------~~ywr~d~ 125 (195)
T 1itv_A 64 SKKLFFFSG--------RQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG----------RRLWRFDV 125 (195)
T ss_dssp TCCEEEEET--------TEEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET----------TEEEEEET
T ss_pred CCeEEEEeC--------CEEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC----------CEEEEEeC
Confidence 688999988 4688887542111 11222 222112334344434789999987 67899998
Q ss_pred CCCcEEE-----cC-CCC-CCCCCcEEEEECCEEEEEecc
Q 020682 205 ETRKWDS-----IP-PLP-SPRYSPATQLWRGRLHVMGGS 237 (322)
Q Consensus 205 ~t~~W~~-----~~-~~p-~~r~~~~~~~~~~~Lyv~GG~ 237 (322)
.+++=.+ +. ..+ .+..-.++..+++.+|.+-|.
T Consensus 126 ~~~~~~~gyPr~i~~~w~Gvp~~idaa~~~~g~~Yffkg~ 165 (195)
T 1itv_A 126 KAQMVDPRSASEVDRMFPGVPLDTHDVFQFREKAYFCQDR 165 (195)
T ss_dssp TTTEECGGGCEEHHHHSTTSCSSCSEEEEETTEEEEEETT
T ss_pred CcccccCCCccChhhcCCCCCCCCCEEEEeCCeEEEEeCC
Confidence 7754221 11 111 122334666678999999774
No 111
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=78.94 E-value=10 Score=33.05 Aligned_cols=61 Identities=5% Similarity=-0.016 Sum_probs=35.9
Q ss_pred eeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCC
Q 020682 146 HVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP 214 (322)
Q Consensus 146 ~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 214 (322)
.++.+|.++.+++.+..... ...-..+++. +++||+.+...+ ...+..||+.+.+++.+..
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~--~~~p~~~a~spdg~l~~~~~~~~------~~~v~~~~~~~g~~~~~~~ 80 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAA--TQNPTYLALSAKDCLYSVDKEDD------EGGIAAWQIDGQTAHKLNT 80 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEE--CSCCCCEEECTTCEEEEEEEETT------EEEEEEEEEETTEEEEEEE
T ss_pred EEEEEcCCCCeEEEeeeeec--cCCcceEEEccCCeEEEEEecCC------CceEEEEEecCCcEEEeee
Confidence 47778888887766432211 1111223443 677887764211 2678899998888776654
No 112
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=78.63 E-value=10 Score=37.33 Aligned_cols=100 Identities=11% Similarity=0.051 Sum_probs=51.0
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
++..++.|+.+ ..+.+||..+.+....-.... ... .+++.. ++..+++|+.+ ..+..||..+
T Consensus 24 ~~~~la~~~~~------g~v~iwd~~~~~~~~~~~~~~--~~v-~~~~~s~~~~~l~~~~~d--------g~i~vw~~~~ 86 (814)
T 3mkq_A 24 TEPWVLTTLYS------GRVEIWNYETQVEVRSIQVTE--TPV-RAGKFIARKNWIIVGSDD--------FRIRVFNYNT 86 (814)
T ss_dssp SSSEEEEEETT------SEEEEEETTTTEEEEEEECCS--SCE-EEEEEEGGGTEEEEEETT--------SEEEEEETTT
T ss_pred CCCEEEEEeCC------CEEEEEECCCCceEEEEecCC--CcE-EEEEEeCCCCEEEEEeCC--------CeEEEEECCC
Confidence 45556666632 358889988765433222111 112 233333 55566666642 5788899988
Q ss_pred CcEEEcCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEee
Q 020682 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
.+....-..... ....+.+ +++.++.|+.++ .+..|++
T Consensus 87 ~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~dg-----~i~vw~~ 126 (814)
T 3mkq_A 87 GEKVVDFEAHPD--YIRSIAVHPTKPYVLSGSDDL-----TVKLWNW 126 (814)
T ss_dssp CCEEEEEECCSS--CEEEEEECSSSSEEEEEETTS-----EEEEEEG
T ss_pred CcEEEEEecCCC--CEEEEEEeCCCCEEEEEcCCC-----EEEEEEC
Confidence 775443211111 1122222 455666666543 3666765
No 113
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=78.61 E-value=4.4 Score=35.85 Aligned_cols=105 Identities=12% Similarity=0.096 Sum_probs=52.0
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCC----------CCCCCCCceeEEEEe--CCEEEEEecccCCCCCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFD----------MPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGP 195 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~----------~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~ 195 (322)
++.+++.|+.+ ..+.+||..+........ .+..-...-.+++.. ++.+++.|+.+
T Consensus 55 ~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d------- 121 (408)
T 4a11_B 55 EGRYMLSGGSD------GVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD------- 121 (408)
T ss_dssp TCCEEEEEETT------SCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT-------
T ss_pred CCCEEEEEcCC------CeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC-------
Confidence 56777777754 247888887655322111 000001122233333 44566666642
Q ss_pred CceEEEEeCCCCcEEEcCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEee
Q 020682 196 TSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 196 ~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
..+..||..+.+-...-..+........... ++.+++.|+.++ .+..|++
T Consensus 122 -~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~d~ 173 (408)
T 4a11_B 122 -KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGP-----KVQLCDL 173 (408)
T ss_dssp -SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSS-----SEEEEES
T ss_pred -CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCC-----eEEEEeC
Confidence 5788899888765544333222111111111 334677776543 3666664
No 114
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=78.54 E-value=12 Score=39.13 Aligned_cols=136 Identities=10% Similarity=0.030 Sum_probs=67.5
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~ 207 (322)
+++.++.|+.+ ..+.+||..+.+........ ..-.+++...+..++.|+.+ ..+..||..+.
T Consensus 1014 dg~~l~s~~~d------g~i~vwd~~~~~~~~~~~~~----~~v~~~~~~~~~~l~~~~~d--------g~v~vwd~~~~ 1075 (1249)
T 3sfz_A 1014 DGKTLISSSED------SVIQVWNWQTGDYVFLQAHQ----ETVKDFRLLQDSRLLSWSFD--------GTVKVWNVITG 1075 (1249)
T ss_dssp SSSCEEEECSS------SBEEEEETTTTEEECCBCCS----SCEEEEEECSSSEEEEEESS--------SEEEEEETTTT
T ss_pred CCCEEEEEcCC------CEEEEEECCCCceEEEecCC----CcEEEEEEcCCCcEEEEECC--------CcEEEEECCCC
Confidence 45566666643 35888999887766443222 12233444433334555532 56888998876
Q ss_pred cEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccCCCC--CcCceeEEEECCEE
Q 020682 208 KWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPR--GGPHRACFVFNDRL 285 (322)
Q Consensus 208 ~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~--~~~~~~~~~~~~~l 285 (322)
+-...-..........+..-++++++.|+.++ .+..|++. +.. .+..+.. .........-++++
T Consensus 1076 ~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~-----~v~iwd~~-------~~~--~~~~l~~h~~~v~~~~~s~dg~~ 1141 (1249)
T 3sfz_A 1076 RIERDFTCHQGTVLSCAISSDATKFSSTSADK-----TAKIWSFD-------LLS--PLHELKGHNGCVRCSAFSLDGIL 1141 (1249)
T ss_dssp CCCEEEECCSSCCCCEEECSSSSSCEEECCSS-----CCCEECSS-------SSS--CSBCCCCCSSCEEEEEECSSSSE
T ss_pred ceeEEEcccCCcEEEEEECCCCCEEEEEcCCC-----cEEEEECC-------Ccc--eeeeeccCCCcEEEEEECCCCCE
Confidence 53222111111122222334566777777644 36667643 221 2222221 11111222337778
Q ss_pred EEEecCCCCC
Q 020682 286 FVVGGQEGDF 295 (322)
Q Consensus 286 yv~GG~~~~~ 295 (322)
++.|+.++..
T Consensus 1142 lat~~~dg~i 1151 (1249)
T 3sfz_A 1142 LATGDDNGEI 1151 (1249)
T ss_dssp EEEEETTSCC
T ss_pred EEEEeCCCEE
Confidence 8888877653
No 115
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=78.48 E-value=12 Score=33.68 Aligned_cols=100 Identities=8% Similarity=0.087 Sum_probs=52.8
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
+++.++.|+.+ ..+.+||.++.+-...... + ...-.+++.. ++..++.|+.+ ..+..||..+
T Consensus 134 dg~~l~s~~~d------~~i~iwd~~~~~~~~~~~~-h--~~~v~~~~~~p~~~~l~s~s~d--------~~v~iwd~~~ 196 (393)
T 1erj_A 134 DGKFLATGAED------RLIRIWDIENRKIVMILQG-H--EQDIYSLDYFPSGDKLVSGSGD--------RTVRIWDLRT 196 (393)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTEEEEEECC-C--SSCEEEEEECTTSSEEEEEETT--------SEEEEEETTT
T ss_pred CCCEEEEEcCC------CeEEEEECCCCcEEEEEcc-C--CCCEEEEEEcCCCCEEEEecCC--------CcEEEEECCC
Confidence 56677777754 2488889887654332111 1 1122334443 44455556542 5678889988
Q ss_pred CcEEEcCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEee
Q 020682 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
.+-...-..... ...++.. ++++++.|+.++ .+..|++
T Consensus 197 ~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~s~d~-----~v~iwd~ 236 (393)
T 1erj_A 197 GQCSLTLSIEDG--VTTVAVSPGDGKYIAAGSLDR-----AVRVWDS 236 (393)
T ss_dssp TEEEEEEECSSC--EEEEEECSTTCCEEEEEETTS-----CEEEEET
T ss_pred CeeEEEEEcCCC--cEEEEEECCCCCEEEEEcCCC-----cEEEEEC
Confidence 765433221111 1122222 567788887654 3666664
No 116
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=77.85 E-value=15 Score=31.59 Aligned_cols=104 Identities=6% Similarity=-0.070 Sum_probs=53.0
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCc--eEECCCCCCCCCCceeEEEE-----eCCEEEEEecccCCCCCCCCceEE
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDMAHSHLGVVS-----DGRYIYIVSGQYGPQCRGPTSRTF 200 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~p~~r~~~~~~~-----~~~~Iyv~GG~~~~~~~~~~~~v~ 200 (322)
++..++.|+.+ ..+.+||..+.+ ...+........+...+++. .++.+++.|+.+ ..+.
T Consensus 128 ~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d--------~~i~ 193 (357)
T 3i2n_A 128 GAPEIVTGSRD------GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN--------GDIK 193 (357)
T ss_dssp CCCEEEEEETT------SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT--------SEEE
T ss_pred CccEEEEEeCC------CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC--------CeEE
Confidence 45566666643 247888888754 33332222211223333331 355666666642 5788
Q ss_pred EEeCCCCcEEEcCCCCCCCCCcEEEEE----CCEEEEEeccCCCCCCCCcceEeee
Q 020682 201 VLDSETRKWDSIPPLPSPRYSPATQLW----RGRLHVMGGSKENRHTPGLEHWSIA 252 (322)
Q Consensus 201 ~yd~~t~~W~~~~~~p~~r~~~~~~~~----~~~Lyv~GG~~~~~~~~~~~~~~~~ 252 (322)
.||..+.+-........ .-..+... ++.+++.|+.++ .+..|++.
T Consensus 194 i~d~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~ 242 (357)
T 3i2n_A 194 LFDLRNMALRWETNIKN--GVCSLEFDRKDISMNKLVATSLEG-----KFHVFDMR 242 (357)
T ss_dssp EEETTTTEEEEEEECSS--CEEEEEESCSSSSCCEEEEEESTT-----EEEEEEEE
T ss_pred EEECccCceeeecCCCC--ceEEEEcCCCCCCCCEEEEECCCC-----eEEEEeCc
Confidence 99998876433322211 11222222 456677776543 36667654
No 117
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=77.65 E-value=29 Score=28.72 Aligned_cols=136 Identities=13% Similarity=0.170 Sum_probs=69.4
Q ss_pred EEEEECCEEEEEeecCCCCCCcceeEEEECCCCceEE--C----CCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCC
Q 020682 123 AAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD--R----FDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGP 195 (322)
Q Consensus 123 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~--~----~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~ 195 (322)
+++.+++++|+|-| ..+|+++.....+.. + +.+| ....++.... ++++|+|-|
T Consensus 28 Ai~~~~g~~y~Fkg--------~~~wr~~~~~~~~~p~~I~~~wp~Lp---~~iDAa~~~~~~~~iyfFkG--------- 87 (207)
T 1pex_A 28 AITSLRGETMIFKD--------RFFWRLHPQQVDAELFLTKSFWPELP---NRIDAAYEHPSHDLIFIFRG--------- 87 (207)
T ss_dssp EEEEETTEEEEEET--------TEEEEECSSSSCCEEEEHHHHCTTSC---SSCCEEEEETTTTEEEEEET---------
T ss_pred EEEeCCCcEEEEEC--------CEEEEEeCCCcCCCceehhHhccCCC---CCccEEEEeccCCcEEEEcc---------
Confidence 34457999999987 357888766544321 1 1233 2233222222 689999987
Q ss_pred CceEEEEeCCCCcE---EEcCC--CCCC-CCCcEEEEE--CCEEEEEeccCCCCCCCCcceEeee---eeccccc--cCc
Q 020682 196 TSRTFVLDSETRKW---DSIPP--LPSP-RYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIA---VKDGKAL--EKA 262 (322)
Q Consensus 196 ~~~v~~yd~~t~~W---~~~~~--~p~~-r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~~---v~~~~~~--~~~ 262 (322)
+.+|+|+..+-.- ..+.. +|.. ..--++..+ ++++|+|-|.. .++|+.. +...-|. ...
T Consensus 88 -~~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG~~-------ywr~d~~~~~~d~gyPr~i~~~ 159 (207)
T 1pex_A 88 -RKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSGNQ-------VWRYDDTNHIMDKDYPRLIEED 159 (207)
T ss_dssp -TEEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEETTE-------EEEEETTTTEECSSCCCBHHHH
T ss_pred -CEEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeCCE-------EEEEeCcCccccCCCCccHHHc
Confidence 5677776432211 12222 3321 112233344 47999997742 3444421 0000011 123
Q ss_pred eEeccCCCCCcCceeEEEECCEEEEEecC
Q 020682 263 WRTEIPIPRGGPHRACFVFNDRLFVVGGQ 291 (322)
Q Consensus 263 W~~~~~~p~~~~~~~~~~~~~~lyv~GG~ 291 (322)
|. .+|..-. ++...++++|+|-|.
T Consensus 160 ~~---Gip~~iD--aAf~~~g~~YfFkg~ 183 (207)
T 1pex_A 160 FP---GIGDKVD--AVYEKNGYIYFFNGP 183 (207)
T ss_dssp ST---TSCSCCS--EEEEETTEEEEEETT
T ss_pred CC---CCCCCcc--EEEEcCCcEEEEECC
Confidence 32 2343322 455679999999873
No 118
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=77.38 E-value=28 Score=30.54 Aligned_cols=102 Identities=11% Similarity=0.014 Sum_probs=56.3
Q ss_pred EEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeCCCC
Q 020682 130 LFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 130 ~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~ 207 (322)
++++.|+.+ ..+.+||..+.+.......... ...-.+++.. ++.+++.|+.+ ..+..||..+.
T Consensus 87 ~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~~~d--------~~i~iwd~~~~ 151 (383)
T 3ei3_B 87 TTVAVGSKG------GDIILWDYDVQNKTSFIQGMGP-GDAITGMKFNQFNTNQLFVSSIR--------GATTLRDFSGS 151 (383)
T ss_dssp TEEEEEEBT------SCEEEEETTSTTCEEEECCCST-TCBEEEEEEETTEEEEEEEEETT--------TEEEEEETTSC
T ss_pred CEEEEEcCC------CeEEEEeCCCcccceeeecCCc-CCceeEEEeCCCCCCEEEEEeCC--------CEEEEEECCCC
Confidence 577777753 2588899998776654433111 2233344444 34666666642 56788999887
Q ss_pred cEEEcCCCCCCCCCc-EE-EEECCEEEEEeccCCCCCCCCcceEee
Q 020682 208 KWDSIPPLPSPRYSP-AT-QLWRGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 208 ~W~~~~~~p~~r~~~-~~-~~~~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
....+.......... .+ ..-++++++.|+.++ .+..|++
T Consensus 152 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~i~d~ 192 (383)
T 3ei3_B 152 VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTG-----RLLLLGL 192 (383)
T ss_dssp EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTS-----EEEEEET
T ss_pred ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCC-----CEEEEEC
Confidence 766654322111111 22 223556777777543 3566664
No 119
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=77.13 E-value=17 Score=35.83 Aligned_cols=100 Identities=8% Similarity=0.103 Sum_probs=50.2
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
+++.++.|+.+ ..+.+||..+.+........ ...-.+++.. ++..++.|+.+ ..+..||..+
T Consensus 66 ~~~~l~~~~~d------g~i~vw~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~d--------g~i~vw~~~~ 128 (814)
T 3mkq_A 66 RKNWIIVGSDD------FRIRVFNYNTGEKVVDFEAH---PDYIRSIAVHPTKPYVLSGSDD--------LTVKLWNWEN 128 (814)
T ss_dssp GGTEEEEEETT------SEEEEEETTTCCEEEEEECC---SSCEEEEEECSSSSEEEEEETT--------SEEEEEEGGG
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEEecC---CCCEEEEEEeCCCCEEEEEcCC--------CEEEEEECCC
Confidence 45566667643 35888998877654322111 1122233333 44455555532 5677888876
Q ss_pred C-cEEEcCCCCCCCCCcEEEEE---CCEEEEEeccCCCCCCCCcceEee
Q 020682 207 R-KWDSIPPLPSPRYSPATQLW---RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 207 ~-~W~~~~~~p~~r~~~~~~~~---~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
+ .....-. ........+.+ ++.+++.|+.++ .+..|++
T Consensus 129 ~~~~~~~~~--~~~~~v~~~~~~p~~~~~l~~~~~dg-----~v~vwd~ 170 (814)
T 3mkq_A 129 NWALEQTFE--GHEHFVMCVAFNPKDPSTFASGCLDR-----TVKVWSL 170 (814)
T ss_dssp TSEEEEEEE--CCSSCEEEEEEETTEEEEEEEEETTS-----EEEEEET
T ss_pred CceEEEEEc--CCCCcEEEEEEEcCCCCEEEEEeCCC-----eEEEEEC
Confidence 5 3222211 11111122223 456777777644 3666664
No 120
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=76.91 E-value=15 Score=31.45 Aligned_cols=168 Identities=10% Similarity=0.086 Sum_probs=81.5
Q ss_pred hccccccCCCCEEECCCCCC--CCcccEEEEE--CCEEEEEeecCCC-----CCCcceeEEEECCCCceEECC-CCCCCC
Q 020682 98 TFADLPAPDLEWEQMPSAPV--PRLDGAAIQI--KNLFYVFAGYGSL-----DYVHSHVDVYNFTDNKWVDRF-DMPKDM 167 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~--~~~lyv~GG~~~~-----~~~~~~v~~yd~~~~~W~~~~-~~~~p~ 167 (322)
.+..||+.+.+++.+...+. +.....-..+ ++++|+..-.... ......++++|+.. +...+. .+.
T Consensus 74 ~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~--- 149 (297)
T 3g4e_A 74 KFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVD--- 149 (297)
T ss_dssp EEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEES---
T ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccc---
Confidence 57788888887776644322 2121112222 5677774321110 11224688888763 222221 111
Q ss_pred CCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeC--CCCcEEE---cCCCCCCCCCc-EEEE-ECCEEEEEeccC
Q 020682 168 AHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDS--ETRKWDS---IPPLPSPRYSP-ATQL-WRGRLHVMGGSK 238 (322)
Q Consensus 168 ~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~--~t~~W~~---~~~~p~~r~~~-~~~~-~~~~Lyv~GG~~ 238 (322)
...+++.. ++.+|+.... ...+++||. .+.+... +..++.....+ .+++ -+|+||+.....
T Consensus 150 --~pngi~~spdg~~lyv~~~~--------~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~ 219 (297)
T 3g4e_A 150 --ISNGLDWSLDHKIFYYIDSL--------SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG 219 (297)
T ss_dssp --BEEEEEECTTSCEEEEEEGG--------GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT
T ss_pred --cccceEEcCCCCEEEEecCC--------CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC
Confidence 12244543 4578887643 256777765 5555421 11222111111 2333 356788764321
Q ss_pred CCCCCCCcceEeeeeeccccccCceEeccCCCCCcCceeEEEEC----CEEEEEecCCC
Q 020682 239 ENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFN----DRLFVVGGQEG 293 (322)
Q Consensus 239 ~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~~~~~~~~~~~----~~lyv~GG~~~ 293 (322)
..+.+|+ |.+.+-....++|.... ..+..+ +.|||.....+
T Consensus 220 -----~~v~~~d-------~~tG~~~~~i~~p~~~~--t~~~f~g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 220 -----GRVIRLD-------PVTGKRLQTVKLPVDKT--TSCCFGGKNYSEMYVTCARDG 264 (297)
T ss_dssp -----TEEEEEC-------TTTCCEEEEEECSSSBE--EEEEEESGGGCEEEEEEBCTT
T ss_pred -----CEEEEEc-------CCCceEEEEEECCCCCc--eEEEEeCCCCCEEEEEcCCcC
Confidence 1244444 55666555545554333 333333 48999987654
No 121
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=76.73 E-value=20 Score=30.77 Aligned_cols=107 Identities=7% Similarity=-0.003 Sum_probs=52.6
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
++++++.|+.+ ..+.+||..+.+-... +... ...-.+++.. ++..++.|+.+ ..+..||..+
T Consensus 43 ~~~~l~~~~~d------g~i~vwd~~~~~~~~~--~~~h-~~~v~~~~~~~~~~~l~s~~~d--------g~i~iwd~~~ 105 (369)
T 3zwl_B 43 EGDLLFSCSKD------SSASVWYSLNGERLGT--LDGH-TGTIWSIDVDCFTKYCVTGSAD--------YSIKLWDVSN 105 (369)
T ss_dssp TSCEEEEEESS------SCEEEEETTTCCEEEE--ECCC-SSCEEEEEECTTSSEEEEEETT--------TEEEEEETTT
T ss_pred CCCEEEEEeCC------CEEEEEeCCCchhhhh--hhhc-CCcEEEEEEcCCCCEEEEEeCC--------CeEEEEECCC
Confidence 45566666643 2478889877654332 2211 1122233443 45566666642 5788899888
Q ss_pred CcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceEeee
Q 020682 207 RKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIA 252 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~~ 252 (322)
.+-...-..+.+ .......-+++.++.++.+.......+..|++.
T Consensus 106 ~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~ 150 (369)
T 3zwl_B 106 GQCVATWKSPVP-VKRVEFSPCGNYFLAILDNVMKNPGSINIYEIE 150 (369)
T ss_dssp CCEEEEEECSSC-EEEEEECTTSSEEEEEECCBTTBCCEEEEEEEE
T ss_pred CcEEEEeecCCC-eEEEEEccCCCEEEEecCCccCCCCEEEEEEec
Confidence 765443222111 111111224556666654422223446667654
No 122
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=76.65 E-value=32 Score=28.63 Aligned_cols=119 Identities=8% Similarity=-0.004 Sum_probs=59.8
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEE-ECCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQ-IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~ 176 (322)
.+..||+. .+............-..++. -++.+|+....+ ..+++||+. .+..... .+.+ ...-.++++
T Consensus 37 ~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~~-g~~~~~~-~~~~-~~~~~~i~~ 106 (299)
T 2z2n_A 37 MISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAA------NKIGRITKK-GIIKEYT-LPNP-DSAPYGITE 106 (299)
T ss_dssp EEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTT------TEEEEECTT-SCEEEEE-CSST-TCCEEEEEE
T ss_pred cEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCC------CeEEEECCC-CcEEEEe-CCCc-CCCceeeEE
Confidence 46677776 55554431111111222332 256788875321 258889886 3444432 2211 223345555
Q ss_pred e-CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEE-CCEEEEEe
Q 020682 177 D-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMG 235 (322)
Q Consensus 177 ~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~Lyv~G 235 (322)
. ++.||+.... ...+.+||+ +.+............-..++.. +++||+..
T Consensus 107 ~~~g~l~v~~~~--------~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 158 (299)
T 2z2n_A 107 GPNGDIWFTEMN--------GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTE 158 (299)
T ss_dssp CTTSCEEEEETT--------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEE
T ss_pred CCCCCEEEEecC--------CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEe
Confidence 5 5789987532 257888998 6665544211111222233333 46788764
No 123
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=76.63 E-value=17 Score=33.01 Aligned_cols=101 Identities=5% Similarity=0.033 Sum_probs=50.6
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
++.+++.|+.+ ..+.++|.+++.-..+...... .....++++. ++.+++.|+.+ ..+..+|...
T Consensus 176 ~~~~l~s~s~D------~~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~~d--------g~i~~wd~~~ 240 (435)
T 4e54_B 176 NTNQFYASSME------GTTRLQDFKGNILRVFASSDTI-NIWFCSLDVSASSRMVVTGDNV--------GNVILLNMDG 240 (435)
T ss_dssp CTTEEEEECSS------SCEEEEETTSCEEEEEECCSSC-SCCCCCEEEETTTTEEEEECSS--------SBEEEEESSS
T ss_pred CCCEEEEEeCC------CEEEEeeccCCceeEEeccCCC-CccEEEEEECCCCCEEEEEeCC--------CcEeeeccCc
Confidence 34566666644 2477789887765543322211 1112233333 56677777643 4677888765
Q ss_pred CcEEEcCCCCCCCCCcEEEEE--C-CEEEEEeccCCCCCCCCcceEee
Q 020682 207 RKWDSIPPLPSPRYSPATQLW--R-GRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~-~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
.. +..+..-...-..+.+ + +.+++.|+.++ .+..|++
T Consensus 241 ~~---~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~-----~v~iwd~ 280 (435)
T 4e54_B 241 KE---LWNLRMHKKKVTHVALNPCCDWFLATASVDQ-----TVKIWDL 280 (435)
T ss_dssp CB---CCCSBCCSSCEEEEEECTTCSSEEEEEETTS-----BCCEEET
T ss_pred ce---eEEEecccceEEeeeecCCCceEEEEecCcc-----eeeEEec
Confidence 43 2222211111222333 2 34777777644 3566765
No 124
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=76.55 E-value=39 Score=29.91 Aligned_cols=138 Identities=9% Similarity=0.009 Sum_probs=67.7
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCc--eEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~ 204 (322)
++.+++.|+.+ ..+.+||..... -..+..-.. .-.+++.. ++..++.|+.+ ..+..||.
T Consensus 217 ~~~~l~sgs~D------~~v~~wd~~~~~~~~~~~~~h~~----~v~~v~~~p~~~~l~s~s~D--------~~i~lwd~ 278 (380)
T 3iz6_a 217 NANMFISGSCD------TTVRLWDLRITSRAVRTYHGHEG----DINSVKFFPDGQRFGTGSDD--------GTCRLFDM 278 (380)
T ss_dssp SCCEEEEEETT------SCEEEEETTTTCCCCEEECCCSS----CCCEEEECTTSSEEEEECSS--------SCEEEEET
T ss_pred CCCEEEEEECC------CeEEEEECCCCCcceEEECCcCC----CeEEEEEecCCCeEEEEcCC--------CeEEEEEC
Confidence 56777777754 247778876321 112111111 11233333 55667777653 45778888
Q ss_pred CCCcEEEcCCCCCC-------CCCcEEEEECCEEEEEeccCCCCCCCCcceEeeeeeccccccCceE-eccCCC---CCc
Q 020682 205 ETRKWDSIPPLPSP-------RYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWR-TEIPIP---RGG 273 (322)
Q Consensus 205 ~t~~W~~~~~~p~~-------r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~-~~~~~p---~~~ 273 (322)
.+..-...-..... .....+...++++++.|+.++ .+..|+.. +.+-. .+..+. ...
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg-----~i~vwd~~-------~~~~~~~~~~~~~~h~~~ 346 (380)
T 3iz6_a 279 RTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG-----DCYVWDTL-------LAEMVLNLGTLQNSHEGR 346 (380)
T ss_dssp TTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS-----CEEEEETT-------TCCEEEEECCSCSSCCCC
T ss_pred CCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCC-----CEEEEECC-------CCceEEEEecccCCCCCc
Confidence 87754333111111 111122233677777777544 36677642 22221 122221 122
Q ss_pred CceeEEEECCEEEEEecCCCCC
Q 020682 274 PHRACFVFNDRLFVVGGQEGDF 295 (322)
Q Consensus 274 ~~~~~~~~~~~lyv~GG~~~~~ 295 (322)
.......-+++.++.||.++..
T Consensus 347 v~~l~~s~dg~~l~sgs~D~~i 368 (380)
T 3iz6_a 347 ISCLGLSSDGSALCTGSWDKNL 368 (380)
T ss_dssp CCEEEECSSSSEEEEECTTSCE
T ss_pred eEEEEECCCCCEEEEeeCCCCE
Confidence 2212233477888899988754
No 125
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=76.06 E-value=23 Score=29.58 Aligned_cols=91 Identities=16% Similarity=0.256 Sum_probs=51.4
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCc--e-EECCC--CCCCCCCceeEEEE--eCCEEEEEecccCCCCCCCCceEE
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK--W-VDRFD--MPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTF 200 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~--W-~~~~~--~~~p~~r~~~~~~~--~~~~Iyv~GG~~~~~~~~~~~~v~ 200 (322)
++++|+|-| +.+|+||..+-. . +.+.. +|....+.. ++.. .++++|+|-| +..+
T Consensus 87 ~~k~yfFkG--------~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~ID-AAf~~~~~g~~YfFkG----------~~yw 147 (218)
T 1gen_A 87 EEKAVFFAG--------NEYWIYSASTLERGYPKPLTSLGLPPDVQRVD-AAFNWSKNKKTYIFAG----------DKFW 147 (218)
T ss_dssp TTEEEEEET--------TEEEEEETTEECTTCSEEGGGGTCCTTCCCCS-EEEEETTTTEEEEEET----------TEEE
T ss_pred CCEEEEEeC--------CEEEEEcCccccCCCCccHhhcCCCCCcCCcc-EEEEEcCCCeEEEEEC----------CEEE
Confidence 689999988 468999853110 0 11211 221111233 3333 3689999987 6789
Q ss_pred EEeCCCCcEEEc-----C-C-CCCCCCCcEEEEEC--CEEEEEecc
Q 020682 201 VLDSETRKWDSI-----P-P-LPSPRYSPATQLWR--GRLHVMGGS 237 (322)
Q Consensus 201 ~yd~~t~~W~~~-----~-~-~p~~r~~~~~~~~~--~~Lyv~GG~ 237 (322)
+||..+++-.+- . . +..+..-.++..++ +++|.|-|.
T Consensus 148 r~d~~~~~v~~gyPr~i~~~w~g~p~~idaAf~~~~~g~~YfFkg~ 193 (218)
T 1gen_A 148 RYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGA 193 (218)
T ss_dssp EEETTTTEECSSCCEEHHHHSSSCCSSCSEEEECTTTCEEEEEETT
T ss_pred EEECccccccCCCCcchhhccCCCCCCCCEEEEEcCCCcEEEEECC
Confidence 999877643221 1 0 11123334555665 899999764
No 126
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=75.95 E-value=26 Score=29.41 Aligned_cols=18 Identities=22% Similarity=0.455 Sum_probs=14.7
Q ss_pred eCCEEEEEecccCCCCCCCCceEEEEeC
Q 020682 177 DGRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (322)
Q Consensus 177 ~~~~Iyv~GG~~~~~~~~~~~~v~~yd~ 204 (322)
.++++|+|-| +.+|+||.
T Consensus 69 ~~g~~~fFkg----------~~~W~~d~ 86 (225)
T 3oyo_A 69 EASEAYVFSG----------NHSAYIDY 86 (225)
T ss_dssp STTEEEEEET----------TEEEEEEC
T ss_pred CCCeEEEEcC----------CEEEEEec
Confidence 5899999987 67888875
No 127
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=75.90 E-value=12 Score=33.34 Aligned_cols=104 Identities=12% Similarity=-0.008 Sum_probs=53.0
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEE-----CCCCCCCCCCceeEEEEe-CC-EEEEEecccCCCCCCCCceEE
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD-----RFDMPKDMAHSHLGVVSD-GR-YIYIVSGQYGPQCRGPTSRTF 200 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~-----~~~~~~p~~r~~~~~~~~-~~-~Iyv~GG~~~~~~~~~~~~v~ 200 (322)
++.+++.|+.+ ..+.+||..+..... +..+... ...-.+++.. ++ .+++.|+.+ ..+.
T Consensus 93 ~~~~l~s~s~d------g~v~vw~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~~l~s~~~d--------g~i~ 157 (402)
T 2aq5_A 93 NDNVIASGSED------CTVMVWEIPDGGLVLPLREPVITLEGH-TKRVGIVAWHPTAQNVLLSAGCD--------NVIL 157 (402)
T ss_dssp CTTEEEEEETT------SEEEEEECCTTCCSSCBCSCSEEEECC-SSCEEEEEECSSBTTEEEEEETT--------SCEE
T ss_pred CCCEEEEEeCC------CeEEEEEccCCCCccccCCceEEecCC-CCeEEEEEECcCCCCEEEEEcCC--------CEEE
Confidence 56677777754 358888888765421 1111111 1222233443 32 467677643 4678
Q ss_pred EEeCCCCcEEEcCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEee
Q 020682 201 VLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 201 ~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
.||..+.+....-...........+.+ ++++++.|+.++ .+..|++
T Consensus 158 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~ 205 (402)
T 2aq5_A 158 VWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDK-----RVRVIEP 205 (402)
T ss_dssp EEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTS-----EEEEEET
T ss_pred EEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCC-----cEEEEeC
Confidence 899988765433210111111222233 566777777543 3666664
No 128
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=75.85 E-value=18 Score=33.01 Aligned_cols=138 Identities=7% Similarity=0.040 Sum_probs=64.0
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECC--CCceEEC-CCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEe
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFT--DNKWVDR-FDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLD 203 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~--~~~W~~~-~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd 203 (322)
+..|++.|+.+ ..+.+||.. +.+.... ..... +..-.+++.. ++..++.|+. ...++.+|
T Consensus 114 ~~~l~~~~~~d------g~v~iwd~~~~~~~~~~~~~~~~~--~~~v~~~~~sp~~~~l~~~~~--------~g~v~~~~ 177 (450)
T 2vdu_B 114 ESRLIACADSD------KSLLVFDVDKTSKNVLKLRKRFCF--SKRPNAISIAEDDTTVIIADK--------FGDVYSID 177 (450)
T ss_dssp SSEEEEEEGGG------TEEEEEEECSSSSSCEEEEEEEEC--SSCEEEEEECTTSSEEEEEET--------TSEEEEEE
T ss_pred CCEEEEEECCC------CeEEEEECcCCCCceeeeeecccC--CCCceEEEEcCCCCEEEEEeC--------CCcEEEEe
Confidence 34556777753 357788877 4433221 11111 1122234443 4555556653 25678888
Q ss_pred CCCCcEEE--cCCCCCCCCCc-E-EEEEC---CEEEEEeccCCCCCCCCcceEeeeeeccccccCceEec-cCCCCCcCc
Q 020682 204 SETRKWDS--IPPLPSPRYSP-A-TQLWR---GRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTE-IPIPRGGPH 275 (322)
Q Consensus 204 ~~t~~W~~--~~~~p~~r~~~-~-~~~~~---~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~-~~~p~~~~~ 275 (322)
..+..-.. +..+....... . ...-+ +++++.|+.++ .+..|++. +..-... ..-......
T Consensus 178 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~-----~i~vwd~~-------~~~~~~~~~~~h~~~v~ 245 (450)
T 2vdu_B 178 INSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDE-----HIKISHYP-------QCFIVDKWLFGHKHFVS 245 (450)
T ss_dssp TTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTS-----CEEEEEES-------CTTCEEEECCCCSSCEE
T ss_pred cCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCC-----cEEEEECC-------CCceeeeeecCCCCceE
Confidence 77654321 11111111111 1 22335 77888887643 46777753 3322211 111111111
Q ss_pred eeEEEECCEEEEEecCCCC
Q 020682 276 RACFVFNDRLFVVGGQEGD 294 (322)
Q Consensus 276 ~~~~~~~~~lyv~GG~~~~ 294 (322)
..... ++++++.|+.++.
T Consensus 246 ~~~~s-d~~~l~s~~~d~~ 263 (450)
T 2vdu_B 246 SICCG-KDYLLLSAGGDDK 263 (450)
T ss_dssp EEEEC-STTEEEEEESSSE
T ss_pred EEEEC-CCCEEEEEeCCCe
Confidence 12222 7777888886654
No 129
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=75.61 E-value=34 Score=28.46 Aligned_cols=118 Identities=11% Similarity=0.106 Sum_probs=59.7
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEEE-CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~ 176 (322)
.+..||+. .+............-..++.. ++.+|+....+ ..+.+||+. .+..... ++.+ ...-.++++
T Consensus 84 ~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~~-g~~~~~~-~~~~-~~~~~~i~~ 153 (300)
T 2qc5_A 84 KIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNG------DRIGKLTAD-GTIYEYD-LPNK-GSYPAFITL 153 (300)
T ss_dssp EEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTT------TEEEEECTT-SCEEEEE-CSST-TCCEEEEEE
T ss_pred eEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCC------CeEEEECCC-CCEEEcc-CCCC-CCCceeEEE
Confidence 46777776 655543211111122233332 57788875321 358889987 5544322 2211 223344555
Q ss_pred e-CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCc-EEEEE-CCEEEEEe
Q 020682 177 D-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSP-ATQLW-RGRLHVMG 235 (322)
Q Consensus 177 ~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~-~~~~~-~~~Lyv~G 235 (322)
. +++||+.... ...+.+||+ +.+...+. ++...... .++.- ++.||+..
T Consensus 154 d~~g~l~v~~~~--------~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~ 205 (300)
T 2qc5_A 154 GSDNALWFTENQ--------NNSIGRITN-TGKLEEYP-LPTNAAAPVGITSGNDGALWFVE 205 (300)
T ss_dssp CTTSSEEEEETT--------TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEE
T ss_pred CCCCCEEEEecC--------CCeEEEECC-CCcEEEee-CCCCCCCcceEEECCCCCEEEEc
Confidence 3 5678886531 267889998 66666543 22221222 23332 46788764
No 130
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=75.55 E-value=16 Score=32.12 Aligned_cols=69 Identities=7% Similarity=0.030 Sum_probs=35.9
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCC---CCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEe
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDM---PKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLD 203 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~---~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd 203 (322)
++ +++.|+.+ ..+.+||..+.+-...-.. ..+....-.+++.. ++.+++.|+.++. ...+..||
T Consensus 197 ~~-~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~-----~g~i~i~d 264 (397)
T 1sq9_A 197 RG-LIATGFNN------GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS-----FGCITLYE 264 (397)
T ss_dssp TS-EEEEECTT------SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETT-----EEEEEEEE
T ss_pred Cc-eEEEEeCC------CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCC-----CceEEEEE
Confidence 45 66666543 3588899987654332221 10001112233333 5566667765411 25788999
Q ss_pred CCCCc
Q 020682 204 SETRK 208 (322)
Q Consensus 204 ~~t~~ 208 (322)
..+.+
T Consensus 265 ~~~~~ 269 (397)
T 1sq9_A 265 TEFGE 269 (397)
T ss_dssp TTTCC
T ss_pred CCCCc
Confidence 88765
No 131
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=75.32 E-value=26 Score=29.27 Aligned_cols=96 Identities=8% Similarity=0.004 Sum_probs=44.9
Q ss_pred ECCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCC
Q 020682 127 IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 127 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
.++..++.|+.+ ..+.+||..+..-........ . .-.+++.. ++.+++.|+.+ ..+..||..
T Consensus 27 ~~~~~l~s~~~d------g~v~vw~~~~~~~~~~~~~~~--~-~v~~~~~~~~~~~l~~~~~d--------g~i~~~~~~ 89 (313)
T 3odt_A 27 VDDSKVASVSRD------GTVRLWSKDDQWLGTVVYTGQ--G-FLNSVCYDSEKELLLFGGKD--------TMINGVPLF 89 (313)
T ss_dssp EETTEEEEEETT------SEEEEEEESSSEEEEEEEECS--S-CEEEEEEETTTTEEEEEETT--------SCEEEEETT
T ss_pred cCCCEEEEEEcC------CcEEEEECCCCEEEEEeecCC--c-cEEEEEECCCCCEEEEecCC--------CeEEEEEee
Confidence 345556666643 357888887655333221111 1 22233333 55666667653 345566654
Q ss_pred CCc-EEEcCCCCCCCCCcEEEEECCEEEEEeccCC
Q 020682 206 TRK-WDSIPPLPSPRYSPATQLWRGRLHVMGGSKE 239 (322)
Q Consensus 206 t~~-W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~ 239 (322)
... ...+..+...........+++.+++.|+.++
T Consensus 90 ~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~ 124 (313)
T 3odt_A 90 ATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDK 124 (313)
T ss_dssp CCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTS
T ss_pred ecCCCCcccchhhcccCEEEEEecCCEEEEEeCCC
Confidence 421 1112222222222233444666777777644
No 132
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=75.00 E-value=31 Score=29.83 Aligned_cols=146 Identities=10% Similarity=0.106 Sum_probs=68.8
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCC--CceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTD--NKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~--~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~ 204 (322)
+++.++.|+.+ ..+.++|... ..++.+..+... ...-.+++.. ++.+++.|+.+ ..+..+|.
T Consensus 118 ~g~~las~s~D------~~v~iwd~~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~D--------~~i~iW~~ 182 (330)
T 2hes_X 118 DGYYLATCSRD------KSVWIWETDESGEEYECISVLQEH-SQDVKHVIWHPSEALLASSSYD--------DTVRIWKD 182 (330)
T ss_dssp TSCEEEEEETT------SCEEEEECCTTCCCCEEEEEECCC-SSCEEEEEECSSSSEEEEEETT--------SCEEEEEE
T ss_pred CCCEEEEEeCC------CEEEEEeccCCCCCeEEEEEeccC-CCceEEEEECCCCCEEEEEcCC--------CeEEEEEC
Confidence 45666667654 2477788743 334443333221 1112233332 55666677653 45667777
Q ss_pred CCCcEEEcCCCCCCCCCcEEEEE--C--CEEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccCCCC--CcCceeE
Q 020682 205 ETRKWDSIPPLPSPRYSPATQLW--R--GRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPR--GGPHRAC 278 (322)
Q Consensus 205 ~t~~W~~~~~~p~~r~~~~~~~~--~--~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~--~~~~~~~ 278 (322)
.+..|..+..+..-...-..+.+ + +.+++.|+.++ .+..|++.-.. ......|..+..++. ...-.++
T Consensus 183 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~-----~v~iw~~~~~~-~~~~~~~~~~~~~~~~h~~~v~~v 256 (330)
T 2hes_X 183 YDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS-----TVRVWKYMGDD-EDDQQEWVCEAILPDVHKRQVYNV 256 (330)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS-----CEEEEEEEEEC-TTSCEEEEEEEECCSCCSSCEEEE
T ss_pred CCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC-----eEEEEEecCCC-ccccceeEEeeecccccccceEEE
Confidence 77777665443221111112222 2 34556666543 47777764211 011234554443332 1111133
Q ss_pred EEECCEEEEEecCCCC
Q 020682 279 FVFNDRLFVVGGQEGD 294 (322)
Q Consensus 279 ~~~~~~lyv~GG~~~~ 294 (322)
+...+.+++.||.++.
T Consensus 257 ~~s~~~~l~s~~~dg~ 272 (330)
T 2hes_X 257 AWGFNGLIASVGADGV 272 (330)
T ss_dssp EECTTSCEEEEETTSC
T ss_pred EEcCCCEEEEEeCCCE
Confidence 3334556777777664
No 133
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=74.83 E-value=54 Score=31.33 Aligned_cols=84 Identities=11% Similarity=0.035 Sum_probs=46.5
Q ss_pred ceeEEEECC-CC---ceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCC
Q 020682 145 SHVDVYNFT-DN---KWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPR 219 (322)
Q Consensus 145 ~~v~~yd~~-~~---~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r 219 (322)
.+++++|.. +. +...+..-. .......+.. ++++|+.+..++ ...++.+|+.+.+++.+.+.....
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~---~~~~~~~~~spdg~l~~~~~~~~------~~~l~~~~~~~~~~~~l~~~~~~~ 287 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGP---EEAIAQAEWAPDGSLIVATDRTG------WWNLHRVDPATGAATQLCRREEEF 287 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEET---TBCEEEEEECTTSCEEEEECTTS------SCEEEEECTTTCCEEESSCCSSBS
T ss_pred cEEEEEEECCCCcccccEEeCCCC---CceEcceEECCCCeEEEEECCCC------CeEEEEEECCCCceeecccccccc
Confidence 479999998 45 343332211 1122233333 666777665432 358999999999999885432211
Q ss_pred ----C---CcEEEEE-CCEEEEEecc
Q 020682 220 ----Y---SPATQLW-RGRLHVMGGS 237 (322)
Q Consensus 220 ----~---~~~~~~~-~~~Lyv~GG~ 237 (322)
. ....+.. ++++++.+..
T Consensus 288 ~~p~w~~~~~~~~~~~~~~~~~~~~~ 313 (662)
T 3azo_A 288 AGPLWTPGMRWFAPLANGLIAVVHGK 313 (662)
T ss_dssp SCCCCSTTCCSEEECTTSCEEEEEBS
T ss_pred cCccccccCceEeEeCCCEEEEEEEc
Confidence 0 1123333 6677776653
No 134
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=74.72 E-value=27 Score=30.85 Aligned_cols=101 Identities=8% Similarity=-0.066 Sum_probs=49.6
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCC--C-CCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEe
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFD--M-PKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLD 203 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~--~-~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd 203 (322)
.+..++.|+.+ ..+.++|.++.+-..... + .+ ...-.++++. +++.++.|+.+ ..+..+|
T Consensus 92 ~d~~l~~~s~d------g~v~lWd~~~~~~~~~~~~~~~~H--~~~V~~v~~spdg~~l~sgs~d--------~~i~iwd 155 (344)
T 4gqb_B 92 GERGILVASDS------GAVELWELDENETLIVSKFCKYEH--DDIVSTVSVLSSGTQAVSGSKD--------ICIKVWD 155 (344)
T ss_dssp TTTEEEEEETT------SEEEEEEECTTSSCEEEEEEEECC--SSCEEEEEECTTSSEEEEEETT--------SCEEEEE
T ss_pred CCCeEEEEECC------CEEEEEeccCCCceeEeeccccCC--CCCEEEEEECCCCCEEEEEeCC--------CeEEEEE
Confidence 44445566643 257888887765322111 1 11 1112233443 56666777653 4577889
Q ss_pred CCCCcEEEcCCCCCCCCCcEEEEE--CC-EEEEEeccCCCCCCCCcceEee
Q 020682 204 SETRKWDSIPPLPSPRYSPATQLW--RG-RLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 204 ~~t~~W~~~~~~p~~r~~~~~~~~--~~-~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
+.+.+-...-.... ..-..+.+ ++ .+++.|+.++ .+..||+
T Consensus 156 ~~~~~~~~~~~~h~--~~V~~~~~~~~~~~~l~s~s~D~-----~v~iwd~ 199 (344)
T 4gqb_B 156 LAQQVVLSSYRAHA--AQVTCVAASPHKDSVFLSCSEDN-----RILLWDT 199 (344)
T ss_dssp TTTTEEEEEECCCS--SCEEEEEECSSCTTEEEEEETTS-----CEEEEET
T ss_pred CCCCcEEEEEcCcC--CceEEEEecCCCCCceeeecccc-----ccccccc
Confidence 88775332211111 11112222 33 4777777644 3667775
No 135
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=74.65 E-value=28 Score=30.72 Aligned_cols=104 Identities=10% Similarity=0.018 Sum_probs=50.0
Q ss_pred EEEEEeecCCCCCCcceeEEEECCCCceEECCCCC-CCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 130 LFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMP-KDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 130 ~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~-~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
.+++.|+.++.. ..+.+||..+..- .+..+. .. ...-.+++.. ++.+++.|+.+ ..+..||+.+
T Consensus 228 ~~l~~~~~d~~~---~~i~~~d~~~~~~-~~~~~~~~~-~~~v~~~~~s~~~~~~l~s~~~d--------g~v~~wd~~~ 294 (416)
T 2pm9_A 228 TRVATATGSDND---PSILIWDLRNANT-PLQTLNQGH-QKGILSLDWCHQDEHLLLSSGRD--------NTVLLWNPES 294 (416)
T ss_dssp TEEEEEECCSSS---CCCCEEETTSTTS-CSBCCCSCC-SSCEEEEEECSSCSSCEEEEESS--------SEEEEECSSS
T ss_pred CEEEEEECCCCC---ceEEEEeCCCCCC-CcEEeecCc-cCceeEEEeCCCCCCeEEEEeCC--------CCEEEeeCCC
Confidence 577777754322 1477888886431 111222 10 1222334443 56677777642 5688899887
Q ss_pred CcEEEcCCCCCCCCCcEEEEECC-EEEEEeccCCCCCCCCcceEee
Q 020682 207 RKWDSIPPLPSPRYSPATQLWRG-RLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~~~-~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
.+-...-.............-++ ++++.|+.++ .+..|++
T Consensus 295 ~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~-----~i~iw~~ 335 (416)
T 2pm9_A 295 AEQLSQFPARGNWCFKTKFAPEAPDLFACASFDN-----KIEVQTL 335 (416)
T ss_dssp CCEEEEEECSSSCCCCEEECTTCTTEEEECCSSS-----EEEEEES
T ss_pred CccceeecCCCCceEEEEECCCCCCEEEEEecCC-----cEEEEEc
Confidence 65332211111111111122234 5777777643 2555554
No 136
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=74.60 E-value=21 Score=29.86 Aligned_cols=63 Identities=10% Similarity=0.009 Sum_probs=31.8
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~ 207 (322)
++..++.|+.+ ..+.+||..+..- ....... ..........++. ++.|+.+ ..+..||..+.
T Consensus 154 ~~~~l~~~~~d------~~i~i~d~~~~~~-~~~~~~~--~~i~~~~~~~~~~-~~~~~~d--------g~i~i~d~~~~ 215 (313)
T 3odt_A 154 SENKFLTASAD------KTIKLWQNDKVIK-TFSGIHN--DVVRHLAVVDDGH-FISCSND--------GLIKLVDMHTG 215 (313)
T ss_dssp TTTEEEEEETT------SCEEEEETTEEEE-EECSSCS--SCEEEEEEEETTE-EEEEETT--------SEEEEEETTTC
T ss_pred CCCEEEEEECC------CCEEEEecCceEE-EEeccCc--ccEEEEEEcCCCe-EEEccCC--------CeEEEEECCch
Confidence 45566666643 2477788432222 2221111 1222222334666 5566542 57888998876
Q ss_pred c
Q 020682 208 K 208 (322)
Q Consensus 208 ~ 208 (322)
+
T Consensus 216 ~ 216 (313)
T 3odt_A 216 D 216 (313)
T ss_dssp C
T ss_pred h
Confidence 5
No 137
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=74.28 E-value=43 Score=29.67 Aligned_cols=90 Identities=13% Similarity=0.051 Sum_probs=48.3
Q ss_pred EEEEEeecCCCCCCcceeEEEECCCCceEECCC-CCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCCC
Q 020682 130 LFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFD-MPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 130 ~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~-~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~ 207 (322)
.+++.|+.+ ..+.+||..+.+....-. ... ...-.+++.. ++.+++.|+.+ ..+..||+.+.
T Consensus 145 ~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~ 208 (402)
T 2aq5_A 145 NVLLSAGCD------NVILVWDVGTGAAVLTLGPDVH--PDTIYSVDWSRDGALICTSCRD--------KRVRVIEPRKG 208 (402)
T ss_dssp TEEEEEETT------SCEEEEETTTTEEEEEECTTTC--CSCEEEEEECTTSSCEEEEETT--------SEEEEEETTTT
T ss_pred CEEEEEcCC------CEEEEEECCCCCccEEEecCCC--CCceEEEEECCCCCEEEEEecC--------CcEEEEeCCCC
Confidence 577777754 248889998876543221 111 1222344443 55666666642 57889999887
Q ss_pred cEEEcC-CCCC-CCCCcEEEEECCEEEEEe
Q 020682 208 KWDSIP-PLPS-PRYSPATQLWRGRLHVMG 235 (322)
Q Consensus 208 ~W~~~~-~~p~-~r~~~~~~~~~~~Lyv~G 235 (322)
+-...- .... .+....+..-++++++.|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 209 TVVAEKDRPHEGTRPVHAVFVSEGKILTTG 238 (402)
T ss_dssp EEEEEEECSSCSSSCCEEEECSTTEEEEEE
T ss_pred ceeeeeccCCCCCcceEEEEcCCCcEEEEe
Confidence 643321 1111 112222333467777776
No 138
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=74.24 E-value=32 Score=32.16 Aligned_cols=136 Identities=13% Similarity=0.084 Sum_probs=67.3
Q ss_pred EEEEECCEEEEEeecCCCCCCcceeEEEECCCCceEE--CC----CCCCCCCCceeEEEE-eCCEEEEEecccCCCCCCC
Q 020682 123 AAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD--RF----DMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGP 195 (322)
Q Consensus 123 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~--~~----~~~~p~~r~~~~~~~-~~~~Iyv~GG~~~~~~~~~ 195 (322)
+++.+++++|+|-|. .+|+++.....+.. +. .+|. ..-++... .++++|+|-|
T Consensus 267 Ai~~~~ge~y~Fkg~--------~~wr~~~~~~~~~p~~I~~~Wp~LP~---~iDAa~~~~~~g~~~fFKg--------- 326 (450)
T 1su3_A 267 AITTIRGEVMFFKDR--------FYMRTNPFYPEVELNFISVFWPQLPN---GLEAAYEFADRDEVRFFKG--------- 326 (450)
T ss_dssp EEEEETTEEEEEETT--------EEEECCTTSSSCEEEEGGGTCTTSCS---SCCEEEEEGGGTEEEEEET---------
T ss_pred eEEecCCeEEEEeCC--------EEEEEcCCCCcccceehhHhccCCCC---CeeEEEEEcCCCeEEEEeC---------
Confidence 455689999999883 46776655443321 11 1221 22222222 2689999977
Q ss_pred CceEEEEeCCCCc--E-EEcC---CCCC-CCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEeee---eeccccc--cC
Q 020682 196 TSRTFVLDSETRK--W-DSIP---PLPS-PRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIA---VKDGKAL--EK 261 (322)
Q Consensus 196 ~~~v~~yd~~t~~--W-~~~~---~~p~-~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~~---v~~~~~~--~~ 261 (322)
+.+|+|+..+.. + ..+. -+|. +..--++..+ ++++|+|-|.. .++|+.. +...-|. ..
T Consensus 327 -~~~W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG~~-------yw~yd~~~~~~~~gYPk~I~~ 398 (450)
T 1su3_A 327 -NKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVANK-------YWRYDEYKRSMDPGYPKMIAH 398 (450)
T ss_dssp -TEEEEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEETTE-------EEEEETTTTEECSSCSEEHHH
T ss_pred -CEEEEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeCCE-------EEEEeCCCccccCCCCcchhh
Confidence 567777643210 0 0111 1222 1112233344 58999997732 3444421 0000011 11
Q ss_pred ceEeccCCCCCcCceeEEEECCEEEEEecC
Q 020682 262 AWRTEIPIPRGGPHRACFVFNDRLFVVGGQ 291 (322)
Q Consensus 262 ~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~ 291 (322)
.| +.+|..-. +++..++++|+|-|.
T Consensus 399 ~f---pgip~~iD--AA~~~~g~~YFFkg~ 423 (450)
T 1su3_A 399 DF---PGIGHKVD--AVFMKDGFFYFFHGT 423 (450)
T ss_dssp HS---TTSCSCCS--EEEEETTEEEEEETT
T ss_pred cC---CCCCCCcc--EEEEcCCeEEEEeCC
Confidence 23 23443333 555679999999883
No 139
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=73.84 E-value=41 Score=32.53 Aligned_cols=110 Identities=8% Similarity=-0.039 Sum_probs=52.7
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEEE--CCEEEEEeecCCCCCCcceeEEEECCCC-ceEECCCCCCCCCC-ceeE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDN-KWVDRFDMPKDMAH-SHLG 173 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~~~-~W~~~~~~~~p~~r-~~~~ 173 (322)
.+..+|..+.+-..+............+.. +++.++++..+... ...+++.+|+.+. ....+.....+... ....
T Consensus 236 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~-~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 236 TVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQ-NECKVNAYDAETGRFVRTLFVETDKHYVEPLHP 314 (706)
T ss_dssp EEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTS-CEEEEEEEETTTCCEEEEEEEEECSSCCCCCSC
T ss_pred EEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCC-CeeEEEEEECCCCceeeEEEEccCCCeECccCC
Confidence 466677766654444322111111122222 44433443333222 2246899999887 66554321110000 0011
Q ss_pred EEE-e--CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCC
Q 020682 174 VVS-D--GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP 214 (322)
Q Consensus 174 ~~~-~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 214 (322)
++. - ++++++.+..++ ...++.+|........+..
T Consensus 315 ~~~sp~~dg~~l~~~~~~g------~~~l~~~~~~~~~~~~l~~ 352 (706)
T 2z3z_A 315 LTFLPGSNNQFIWQSRRDG------WNHLYLYDTTGRLIRQVTK 352 (706)
T ss_dssp CEECTTCSSEEEEEECTTS------SCEEEEEETTSCEEEECCC
T ss_pred ceeecCCCCEEEEEEccCC------ccEEEEEECCCCEEEecCC
Confidence 222 2 666555554332 3788999977777777754
No 140
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=73.76 E-value=18 Score=31.13 Aligned_cols=68 Identities=18% Similarity=0.286 Sum_probs=36.1
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCC-ceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDN-KWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~-~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
+++.++.|+.+ ..+.+||..+. +-....... ...-.+++.. ++.+++.|+.+ ..+..||..
T Consensus 186 ~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d--------~~i~v~d~~ 248 (369)
T 3zwl_B 186 KGKYIIAGHKD------GKISKYDVSNNYEYVDSIDLH---EKSISDMQFSPDLTYFITSSRD--------TNSFLVDVS 248 (369)
T ss_dssp GGCEEEEEETT------SEEEEEETTTTTEEEEEEECC---SSCEEEEEECTTSSEEEEEETT--------SEEEEEETT
T ss_pred CCCEEEEEcCC------CEEEEEECCCCcEeEEEEecC---CCceeEEEECCCCCEEEEecCC--------ceEEEEECC
Confidence 34556666643 35889999873 322211111 1122333443 55556666532 578889998
Q ss_pred CCcEEEc
Q 020682 206 TRKWDSI 212 (322)
Q Consensus 206 t~~W~~~ 212 (322)
+.+-...
T Consensus 249 ~~~~~~~ 255 (369)
T 3zwl_B 249 TLQVLKK 255 (369)
T ss_dssp TCCEEEE
T ss_pred CCceeee
Confidence 7764433
No 141
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=73.39 E-value=9.5 Score=32.69 Aligned_cols=59 Identities=15% Similarity=0.073 Sum_probs=29.9
Q ss_pred CEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEE-EECCEEEEEeccCCCCCCCCcceEee
Q 020682 179 RYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQ-LWRGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 179 ~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~-~~~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
+.+++.|+.+ ..+..||..+.+-...-...... -.+++ .-++++++.|+.++ .+..|++
T Consensus 185 ~~~~~s~~~d--------~~i~i~d~~~~~~~~~~~~h~~~-v~~~~~s~~~~~l~s~s~Dg-----~i~iwd~ 244 (340)
T 4aow_A 185 NPIIVSCGWD--------KLVKVWNLANCKLKTNHIGHTGY-LNTVTVSPDGSLCASGGKDG-----QAMLWDL 244 (340)
T ss_dssp SCEEEEEETT--------SCEEEEETTTTEEEEEECCCSSC-EEEEEECTTSSEEEEEETTC-----EEEEEET
T ss_pred CcEEEEEcCC--------CEEEEEECCCCceeeEecCCCCc-EEEEEECCCCCEEEEEeCCC-----eEEEEEe
Confidence 3455556542 45778888877644332211111 11122 22567777887654 3555653
No 142
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=73.17 E-value=12 Score=32.33 Aligned_cols=104 Identities=11% Similarity=0.122 Sum_probs=52.7
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe---CCEEEEEecccCCCCCCCCceEEEEeC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD---GRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~---~~~Iyv~GG~~~~~~~~~~~~v~~yd~ 204 (322)
+++.++.|+.+ ..+.+||..+.+...+..+... ...-.+++.. ++.+++.|+.+ ..+..+|+
T Consensus 24 ~g~~lasgs~D------~~v~lwd~~~~~~~~~~~l~gH-~~~V~~v~~~~~~~~~~l~s~s~D--------~~v~iWd~ 88 (316)
T 3bg1_A 24 YGTRLATCSSD------RSVKIFDVRNGGQILIADLRGH-EGPVWQVAWAHPMYGNILASCSYD--------RKVIIWRE 88 (316)
T ss_dssp GGCEEEEEETT------TEEEEEEEETTEEEEEEEEECC-SSCEEEEEECCGGGSSCEEEEETT--------SCEEEECC
T ss_pred CCCEEEEEeCC------CeEEEEEecCCCcEEEEEEcCC-CccEEEEEeCCCCCCCEEEEEECC--------CEEEEEEC
Confidence 45666677743 3577788776654333222211 1112233432 25566667653 45778898
Q ss_pred CCCcEEEcCCCCCCCCCcEEEEE--C--CEEEEEeccCCCCCCCCcceEee
Q 020682 205 ETRKWDSIPPLPSPRYSPATQLW--R--GRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 205 ~t~~W~~~~~~p~~r~~~~~~~~--~--~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
++.+|..+..+......-..+.+ + +.+++.|+.++ .+..|++
T Consensus 89 ~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~-----~i~lwd~ 134 (316)
T 3bg1_A 89 ENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG-----AISLLTY 134 (316)
T ss_dssp SSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS-----CEEEEEE
T ss_pred CCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC-----CEEEEec
Confidence 88776554322211111122222 2 45677777654 3666665
No 143
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=72.71 E-value=24 Score=30.08 Aligned_cols=86 Identities=15% Similarity=0.231 Sum_probs=45.0
Q ss_pred EECCEEEEEeecCCCCCCcceeEEEECC-CCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEe
Q 020682 126 QIKNLFYVFAGYGSLDYVHSHVDVYNFT-DNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLD 203 (322)
Q Consensus 126 ~~~~~lyv~GG~~~~~~~~~~v~~yd~~-~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd 203 (322)
..++.||+.... ..+++||+. ...|+...+.+. ..+.+.. ++.||+... -..++.||
T Consensus 105 ~~~~~l~v~t~~-------~~l~~~d~~g~~~~~~~~~~~~-----~~~~~~~~~g~l~vgt~---------~~~l~~~d 163 (330)
T 3hxj_A 105 IFEDILYVTSMD-------GHLYAINTDGTEKWRFKTKKAI-----YATPIVSEDGTIYVGSN---------DNYLYAIN 163 (330)
T ss_dssp EETTEEEEECTT-------SEEEEECTTSCEEEEEECSSCC-----CSCCEECTTSCEEEECT---------TSEEEEEC
T ss_pred EECCEEEEEecC-------CEEEEEcCCCCEEEEEcCCCce-----eeeeEEcCCCEEEEEcC---------CCEEEEEC
Confidence 348888875321 258889987 445765322211 1223444 677887431 25788899
Q ss_pred CCCC-cEEEcCCCCCCCCCcEEEE-ECCEEEEEe
Q 020682 204 SETR-KWDSIPPLPSPRYSPATQL-WRGRLHVMG 235 (322)
Q Consensus 204 ~~t~-~W~~~~~~p~~r~~~~~~~-~~~~Lyv~G 235 (322)
++.. .|..-.+ .... ..++. -++.||+-.
T Consensus 164 ~~g~~~~~~~~~--~~~~-~~~~~d~~g~l~v~t 194 (330)
T 3hxj_A 164 PDGTEKWRFKTN--DAIT-SAASIGKDGTIYFGS 194 (330)
T ss_dssp TTSCEEEEEECS--SCCC-SCCEECTTCCEEEES
T ss_pred CCCCEeEEEecC--CCce-eeeEEcCCCEEEEEe
Confidence 8722 3655422 1211 22233 356677653
No 144
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=72.48 E-value=62 Score=30.12 Aligned_cols=115 Identities=12% Similarity=0.158 Sum_probs=65.1
Q ss_pred CCceeEEEEeCCEEEEEecccCCCCCCCCceEEE-E-----eCCCCcEE-EcCC-CCCCCCCcEEEEECCEEEEEe-ccC
Q 020682 168 AHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFV-L-----DSETRKWD-SIPP-LPSPRYSPATQLWRGRLHVMG-GSK 238 (322)
Q Consensus 168 ~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~-y-----d~~t~~W~-~~~~-~p~~r~~~~~~~~~~~Lyv~G-G~~ 238 (322)
.-.-|+.|.+++.=|++|=.++.-. ..++-. | +.....=. .++. ....-..+.+-.++|.||+.- |..
T Consensus 283 vTe~HSFa~i~~~~fa~GyHnGDv~---PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvkyYdgvLyLtTRgt~ 359 (670)
T 3ju4_A 283 VTEVHSFATIDNNGFAMGYHQGDVA---PREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKYYDGVLYLITRGTR 359 (670)
T ss_dssp CSEEEEEEECSSSCEEEEEEECSSS---SCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEEETTEEEEEEEESC
T ss_pred eeeeeeeeEecCCceEEEeccCCCC---cceeeEEEecccccCCcceeeeechhhhccccccchhhhhCCEEEEEecCcC
Confidence 5677899999888888886665543 233322 2 22222222 2222 222233444557899999974 554
Q ss_pred CCCCCCCcceEeeeeeccccccCceEeccCC-CCCcCceeEEEECCEEEEEecCC
Q 020682 239 ENRHTPGLEHWSIAVKDGKALEKAWRTEIPI-PRGGPHRACFVFNDRLFVVGGQE 292 (322)
Q Consensus 239 ~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~-p~~~~~~~~~~~~~~lyv~GG~~ 292 (322)
....-..+.+-+. ....|+.+.-. .-.....-.+..++.||+||-..
T Consensus 360 ~~~~GS~L~rs~d-------~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsER 407 (670)
T 3ju4_A 360 GDRLGSSLHRSRD-------IGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSER 407 (670)
T ss_dssp TTSCCCEEEEESS-------TTSSCEEEECTTCCCSSCCCEEEETTEEEEEEECS
T ss_pred CCCCcceeeeecc-------cCCchhheeccccccccCCCcceeCCEEEEEeccc
Confidence 4444445555442 36778876321 11222235688999999999744
No 145
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=72.44 E-value=12 Score=32.38 Aligned_cols=101 Identities=11% Similarity=0.111 Sum_probs=53.7
Q ss_pred CEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
+.+++.|+.+ ..+.+||..+.+-...... . ...-.+++.. ++.+++.|+.+ ..+..||..+
T Consensus 85 ~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~-~--~~~i~~~~~~~~~~~~l~s~~~d--------g~i~iwd~~~ 147 (366)
T 3k26_A 85 HPLLAVAGSR------GIIRIINPITMQCIKHYVG-H--GNAINELKFHPRDPNLLLSVSKD--------HALRLWNIQT 147 (366)
T ss_dssp CEEEEEEETT------CEEEEECTTTCCEEEEEES-C--CSCEEEEEECSSCTTEEEEEETT--------SCEEEEETTT
T ss_pred CCEEEEecCC------CEEEEEEchhceEeeeecC-C--CCcEEEEEECCCCCCEEEEEeCC--------CeEEEEEeec
Confidence 5677777754 3588889886553221111 1 1122333443 55677777653 5678899988
Q ss_pred CcEEEc-CCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEee
Q 020682 207 RKWDSI-PPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 207 ~~W~~~-~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
.+-... ..+.........+.+ +++.++.|+.++ .+..|++
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~d~ 190 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDH-----SLKLWRI 190 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEES
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCCC-----CEEEEEC
Confidence 764433 221222222222333 456677777643 3666765
No 146
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=72.27 E-value=44 Score=28.27 Aligned_cols=120 Identities=15% Similarity=0.135 Sum_probs=59.1
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCC--CceEE---CCCCCCC--CCCceeEEEEe--CCEEEEEecccCCCCCCCCce
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTD--NKWVD---RFDMPKD--MAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSR 198 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~--~~W~~---~~~~~~p--~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~ 198 (322)
++.+|+.+..+ ..+.+||... .++.. +...+.. .......++.. ++.||+.+.. ...
T Consensus 189 g~~l~~~~~~~------~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~--------~~~ 254 (343)
T 1ri6_A 189 EQYAYCVNELN------SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT--------ASL 254 (343)
T ss_dssp SSEEEEEETTT------TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT--------TTE
T ss_pred CCEEEEEeCCC------CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC--------CCE
Confidence 34577765322 3578888743 44432 2222220 01222234444 4577776532 256
Q ss_pred EEEEeCC--CCcEEEcCCCCCCCCCcEEEE-ECC-EEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccCCCC
Q 020682 199 TFVLDSE--TRKWDSIPPLPSPRYSPATQL-WRG-RLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPR 271 (322)
Q Consensus 199 v~~yd~~--t~~W~~~~~~p~~r~~~~~~~-~~~-~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~ 271 (322)
+..||+. +.+++.+..++....-..++. -++ .||+.++.+ ..+..|+++ +++..++.+..++.
T Consensus 255 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~v~v~~~d-----~~~g~~~~~~~~~~ 321 (343)
T 1ri6_A 255 ITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKS-----HHISVYEIV-----GEQGLLHEKGRYAV 321 (343)
T ss_dssp EEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTT-----CEEEEEEEE-----TTTTEEEEEEEEEC
T ss_pred EEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCC-----CeEEEEEEc-----CCCceeeEcccccc
Confidence 7788877 566766644333222122222 234 466554332 235555443 66777877665544
No 147
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=71.92 E-value=42 Score=27.95 Aligned_cols=146 Identities=8% Similarity=0.007 Sum_probs=70.5
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
++.|||.+... ...+.+||.....-..+.... ...-.++++. ++.+|+.... ...+.+||+..
T Consensus 88 ~g~l~v~~~~~-----~~~i~~~d~~g~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~--------~~~i~~~~~~g 151 (286)
T 1q7f_A 88 SGDIIVTERSP-----THQIQIYNQYGQFVRKFGATI---LQHPRGVTVDNKGRIIVVECK--------VMRVIIFDQNG 151 (286)
T ss_dssp TTEEEEEECGG-----GCEEEEECTTSCEEEEECTTT---CSCEEEEEECTTSCEEEEETT--------TTEEEEECTTS
T ss_pred CCeEEEEcCCC-----CCEEEEECCCCcEEEEecCcc---CCCceEEEEeCCCCEEEEECC--------CCEEEEEcCCC
Confidence 67899886421 135888996554433332211 1223445554 5679987542 26788999876
Q ss_pred CcEEEcCCCCCCCCCcEEEEE-CCEEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccCCCCCcCceeEEE-ECCE
Q 020682 207 RKWDSIPPLPSPRYSPATQLW-RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFV-FNDR 284 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~-~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~~~~~~~~~-~~~~ 284 (322)
..-..+........-..++.- +++||+....+ ..+..|+. ....-..+........-.+++. -+++
T Consensus 152 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~-----~~i~~~~~-------~g~~~~~~~~~g~~~~p~~i~~d~~G~ 219 (286)
T 1q7f_A 152 NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRA-----HCVKVFNY-------EGQYLRQIGGEGITNYPIGVGINSNGE 219 (286)
T ss_dssp CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGG-----TEEEEEET-------TCCEEEEESCTTTSCSEEEEEECTTCC
T ss_pred CEEEEeCCCCccCCcEEEEECCCCCEEEEECCC-----CEEEEEcC-------CCCEEEEEccCCccCCCcEEEECCCCC
Confidence 554444211111111223322 47888875432 23445542 2222222221100011112333 3567
Q ss_pred EEEEecCCC--CCCCCCCC
Q 020682 285 LFVVGGQEG--DFMAKPGS 301 (322)
Q Consensus 285 lyv~GG~~~--~~~~~p~~ 301 (322)
||+....++ ..++++..
T Consensus 220 l~v~~~~~~~~i~~~~~~g 238 (286)
T 1q7f_A 220 ILIADNHNNFNLTIFTQDG 238 (286)
T ss_dssp EEEEECSSSCEEEEECTTS
T ss_pred EEEEeCCCCEEEEEECCCC
Confidence 888876543 44566554
No 148
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=71.02 E-value=37 Score=28.67 Aligned_cols=57 Identities=12% Similarity=0.076 Sum_probs=32.9
Q ss_pred ceeEEEECCCCceEECCCCCCCCCC-ceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEE
Q 020682 145 SHVDVYNFTDNKWVDRFDMPKDMAH-SHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDS 211 (322)
Q Consensus 145 ~~v~~yd~~~~~W~~~~~~~~p~~r-~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~ 211 (322)
..+.++|+.+.+-......+. .. ....+++. ++.+|+.+.. ...+..+|+.+.+-..
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~v~~~~--------~~~v~~~d~~~~~~~~ 70 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIAD--AGPTPMVPMVAPGGRIAYATVNK--------SESLVKIDLVTGETLG 70 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTT--CTTCCCCEEECTTSSEEEEEETT--------TTEEEEEETTTCCEEE
T ss_pred CeEEEEECCCCcEEEEEEcCC--CCCCccceEEcCCCCEEEEEeCC--------CCeEEEEECCCCCeEe
Confidence 368899998766443222222 10 01233443 4478887642 2679999998877543
No 149
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=71.02 E-value=37 Score=29.06 Aligned_cols=58 Identities=12% Similarity=0.109 Sum_probs=31.8
Q ss_pred CEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEE---CCEEEEEeccCCCCCCCCcceEee
Q 020682 179 RYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW---RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 179 ~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~---~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
+.+++.|+.+ ..+..||..+.+-... +.........+.+ ++.+++.|+.++ .+..|++
T Consensus 85 ~~~l~~~~~d--------g~i~v~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~l~s~~~dg-----~i~iwd~ 145 (366)
T 3k26_A 85 HPLLAVAGSR--------GIIRIINPITMQCIKH--YVGHGNAINELKFHPRDPNLLLSVSKDH-----ALRLWNI 145 (366)
T ss_dssp CEEEEEEETT--------CEEEEECTTTCCEEEE--EESCCSCEEEEEECSSCTTEEEEEETTS-----CEEEEET
T ss_pred CCEEEEecCC--------CEEEEEEchhceEeee--ecCCCCcEEEEEECCCCCCEEEEEeCCC-----eEEEEEe
Confidence 5677777743 5688899887653222 1111111222233 556777887644 3667765
No 150
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=70.66 E-value=56 Score=28.79 Aligned_cols=103 Identities=10% Similarity=-0.032 Sum_probs=53.7
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCE-EEEEecccCCCCCCCCceEEEEeCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRY-IYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~-Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
+++.++.|+.+ ..+.+||..+.+-........ ...-.+++.. ++. +++.|+.+ ..+..||..
T Consensus 258 ~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~g~~d--------g~i~vwd~~ 321 (420)
T 3vl1_A 258 YGKYVIAGHVS------GVITVHNVFSKEQTIQLPSKF--TCSCNSLTVDGNNANYIYAGYEN--------GMLAQWDLR 321 (420)
T ss_dssp TTEEEEEEETT------SCEEEEETTTCCEEEEECCTT--SSCEEEEEECSSCTTEEEEEETT--------SEEEEEETT
T ss_pred CCCEEEEEcCC------CeEEEEECCCCceeEEccccc--CCCceeEEEeCCCCCEEEEEeCC--------CeEEEEEcC
Confidence 45667777643 248889988765332211111 1122334443 333 66666642 578889988
Q ss_pred CCcE--EEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceEeee
Q 020682 206 TRKW--DSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIA 252 (322)
Q Consensus 206 t~~W--~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~~ 252 (322)
+..- ..+..- ....-..+..-++++++.|+.++ .+..|++.
T Consensus 322 ~~~~~~~~~~~~-~~~~v~~~~~~~~~~l~s~~~d~-----~v~iw~~~ 364 (420)
T 3vl1_A 322 SPECPVGEFLIN-EGTPINNVYFAAGALFVSSGFDT-----SIKLDIIS 364 (420)
T ss_dssp CTTSCSEEEEES-TTSCEEEEEEETTEEEEEETTTE-----EEEEEEEC
T ss_pred CCcCchhhhhcc-CCCCceEEEeCCCCEEEEecCCc-----cEEEEecc
Confidence 7531 122110 11112233445788888887644 36677753
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=70.57 E-value=17 Score=31.86 Aligned_cols=99 Identities=13% Similarity=0.117 Sum_probs=46.8
Q ss_pred EEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeCCCCc
Q 020682 131 FYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETRK 208 (322)
Q Consensus 131 lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 208 (322)
.+.+|.+.....-.-.++.+|+++.+.+.+..... ..-..+++. +..||+.+....... .-.++.+|..+.+
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~---~~p~~l~~spdg~~l~~~~~~~~~~~---~v~~~~~~~~~g~ 88 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEV---ANPSYLIPSADGKFVYSVNEFSKDQA---AVSAFAFDKEKGT 88 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEEC---SCCCSEEECTTSSEEEEEECCSSTTC---EEEEEEEETTTTE
T ss_pred EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccC---CCCceEEECCCCCEEEEEEccCCCCC---cEEEEEEeCCCCc
Confidence 33456554322211246667888887776544311 111223333 456777665321110 1334556666677
Q ss_pred EEEcCCCCCCCCCcEEEEECCE-EEEEe
Q 020682 209 WDSIPPLPSPRYSPATQLWRGR-LHVMG 235 (322)
Q Consensus 209 W~~~~~~p~~r~~~~~~~~~~~-Lyv~G 235 (322)
.+.+...+.....+....++++ ||+.+
T Consensus 89 ~~~~~~~~~~~~~p~~~~~dg~~l~~~~ 116 (361)
T 3scy_A 89 LHLLNTQKTMGADPCYLTTNGKNIVTAN 116 (361)
T ss_dssp EEEEEEEECSSSCEEEEEECSSEEEEEE
T ss_pred EEEeeEeccCCCCcEEEEECCCEEEEEE
Confidence 7777544322222222222555 66554
No 152
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=70.24 E-value=44 Score=29.92 Aligned_cols=84 Identities=11% Similarity=0.063 Sum_probs=48.8
Q ss_pred ceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcE
Q 020682 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPA 223 (322)
Q Consensus 145 ~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~ 223 (322)
+.|+++|..+.+-..+..+..+ ...-.+++.. ++.+++.|+.+ ..+..||.++.+-...-..... ...
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~-~~~V~sv~fspdg~~lasgs~D--------g~v~iWd~~~~~~~~~~~~h~~--~v~ 193 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQP-GEYISSVAWIKEGNYLAVGTSS--------AEVQLWDVQQQKRLRNMTSHSA--RVG 193 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCST-TCCEEEEEECTTSSEEEEEETT--------SCEEEEETTTTEEEEEECCCSS--CEE
T ss_pred CEEEEEECCCCCEEEEEEecCC-CCcEEEEEECCCCCEEEEEECC--------CeEEEEEcCCCcEEEEEeCCCC--ceE
Confidence 3688999998876654444331 1222334443 56677777653 5678899988764333222222 233
Q ss_pred EEEECCEEEEEeccCC
Q 020682 224 TQLWRGRLHVMGGSKE 239 (322)
Q Consensus 224 ~~~~~~~Lyv~GG~~~ 239 (322)
...+++.+++.|+.++
T Consensus 194 ~~s~~~~~l~sgs~d~ 209 (420)
T 4gga_A 194 SLSWNSYILSSGSRSG 209 (420)
T ss_dssp EEEEETTEEEEEETTS
T ss_pred EEeeCCCEEEEEeCCC
Confidence 4566777777877654
No 153
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=70.14 E-value=32 Score=33.23 Aligned_cols=73 Identities=22% Similarity=0.388 Sum_probs=46.5
Q ss_pred EEEECCEEEEEeecCCCCCCcceeEEEECCCC--ceEECCCCCCCCC----CceeEEEEeCCEEEEEecccCCCCCCCCc
Q 020682 124 AIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDN--KWVDRFDMPKDMA----HSHLGVVSDGRYIYIVSGQYGPQCRGPTS 197 (322)
Q Consensus 124 ~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~--~W~~~~~~~~p~~----r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~ 197 (322)
-++.+++||+.... ..++.+|.++- .|+.-...+.... ....+.++.+++||+... -.
T Consensus 64 P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~---------dg 127 (582)
T 1flg_A 64 AIVSDGVIYVTASY-------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL---------DA 127 (582)
T ss_dssp CEEETTEEEEEETT-------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET---------TT
T ss_pred cEEECCEEEEEcCC-------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC---------CC
Confidence 35679999998763 23888998754 4876433221000 011244578999998532 26
Q ss_pred eEEEEeCCCCc--EEEc
Q 020682 198 RTFVLDSETRK--WDSI 212 (322)
Q Consensus 198 ~v~~yd~~t~~--W~~~ 212 (322)
.+..+|.+|.+ |+.-
T Consensus 128 ~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 128 SVVALNKNTGKVVWKKK 144 (582)
T ss_dssp EEEEEESSSCCEEEEEE
T ss_pred EEEEEECCCCCEEeeec
Confidence 78999998875 8854
No 154
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=69.58 E-value=31 Score=36.01 Aligned_cols=100 Identities=11% Similarity=0.036 Sum_probs=51.6
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
+++.++.||.+ ..+.+||..+.+-... +... ...-.+++.. ++.+++.|+.+ ..+.+||..+
T Consensus 626 ~~~~l~s~~~d------~~i~vw~~~~~~~~~~--~~~h-~~~v~~~~~s~~~~~l~s~~~d--------~~v~vwd~~~ 688 (1249)
T 3sfz_A 626 DGQRIASCGAD------KTLQVFKAETGEKLLD--IKAH-EDEVLCCAFSSDDSYIATCSAD--------KKVKIWDSAT 688 (1249)
T ss_dssp TSSEEEEEETT------SCEEEEETTTCCEEEE--ECCC-SSCEEEEEECTTSSEEEEEETT--------SEEEEEETTT
T ss_pred CCCEEEEEeCC------CeEEEEECCCCCEEEE--eccC-CCCEEEEEEecCCCEEEEEeCC--------CeEEEEECCC
Confidence 56677777743 2488899887654332 1111 1122233333 55566666642 5688999988
Q ss_pred CcEEEcCCCCCCCCCcEEEEE----CCEEEEEeccCCCCCCCCcceEee
Q 020682 207 RKWDSIPPLPSPRYSPATQLW----RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~----~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
.+-...-.. .......+.+ ++.+++.|+.++ .+..|++
T Consensus 689 ~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~sg~~d~-----~v~vwd~ 730 (1249)
T 3sfz_A 689 GKLVHTYDE--HSEQVNCCHFTNKSNHLLLATGSNDF-----FLKLWDL 730 (1249)
T ss_dssp CCEEEEEEC--CSSCEEEEEECSSSSCCEEEEEETTS-----CEEEEET
T ss_pred CceEEEEcC--CCCcEEEEEEecCCCceEEEEEeCCC-----eEEEEEC
Confidence 764432111 1111222233 334566666543 3666764
No 155
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=69.54 E-value=35 Score=30.03 Aligned_cols=108 Identities=10% Similarity=0.027 Sum_probs=44.3
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEE--CCC-CCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEe
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD--RFD-MPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLD 203 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~--~~~-~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd 203 (322)
++++.+.|+.+.....-..+++|+..+..=.. ... ... ...-.+++.. ++++++ ++.+ ..+..||
T Consensus 53 DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~--~~~V~~~~~s~d~~~l~-~s~d--------g~v~lWd 121 (357)
T 4g56_B 53 DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQT--EAGVTDVAWVSEKGILV-ASDS--------GAVELWE 121 (357)
T ss_dssp SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEEC--SSCEEEEEEETTTEEEE-EETT--------SCEEEC-
T ss_pred CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCC--CCCEEEEEEcCCCCEEE-EECC--------CEEEEee
Confidence 67788887765432222357777765432111 110 011 0111233333 565554 4432 4567788
Q ss_pred CCCCcEEEcCCCCC-CCCCc-EEEEE--CCEEEEEeccCCCCCCCCcceEee
Q 020682 204 SETRKWDSIPPLPS-PRYSP-ATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 204 ~~t~~W~~~~~~p~-~r~~~-~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
+.+++-..+..... ..... ..+.+ ++++++.|+.++ .+..|++
T Consensus 122 ~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg-----~v~iwd~ 168 (357)
T 4g56_B 122 ILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF-----SVKVWDL 168 (357)
T ss_dssp -------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS-----CEEEEET
T ss_pred ccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC-----eEEEEEC
Confidence 77665332222111 11111 11222 566777787654 3666764
No 156
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=69.49 E-value=47 Score=28.54 Aligned_cols=73 Identities=15% Similarity=0.238 Sum_probs=34.1
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECC-CCceEECCCCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFT-DNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~-~~~W~~~~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~ 204 (322)
++++|+.+..+ +.+.+||.. +.+...+.....+....-..+++. +..+|+.+...+ .-.++.++.
T Consensus 151 dg~l~v~~~~~------~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~------~v~v~~~~~ 218 (347)
T 3hfq_A 151 DNRLAVIDLGS------DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSS------QIASLKYDT 218 (347)
T ss_dssp TSCEEEEETTT------TEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTT------EEEEEEEET
T ss_pred CCcEEEEeCCC------CEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCC------EEEEEEecC
Confidence 45577664322 358888887 444443322111101111223443 345888654211 123444455
Q ss_pred CCCcEEEc
Q 020682 205 ETRKWDSI 212 (322)
Q Consensus 205 ~t~~W~~~ 212 (322)
.+.++..+
T Consensus 219 ~~g~~~~~ 226 (347)
T 3hfq_A 219 QTGAFTQL 226 (347)
T ss_dssp TTTEEEEE
T ss_pred CCCceEEe
Confidence 46776544
No 157
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=69.33 E-value=39 Score=31.76 Aligned_cols=96 Identities=23% Similarity=0.368 Sum_probs=53.3
Q ss_pred cEEEEECCEEEEEeecCCCCCCcceeEEEECCCCc------------eEECCCCCC----------------CC-CCcee
Q 020682 122 GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK------------WVDRFDMPK----------------DM-AHSHL 172 (322)
Q Consensus 122 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~------------W~~~~~~~~----------------p~-~r~~~ 172 (322)
-++....+++|+|-| +..|+||..+.+ |-.++.... .. ...--
T Consensus 191 DAA~~~~g~~YfFkG--------~~y~rfd~~~~~v~~gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~D 262 (460)
T 1qhu_A 191 TSALRWLGRYYCFQG--------NQFLRFNPVSGEVPPGYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLS 262 (460)
T ss_dssp SEEEEETTEEEEEET--------TEEEEECTTTCCCCTTCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCC
T ss_pred chheeeCCceEEEEC--------CEEEEEcCccCcccCCCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcC
Confidence 344556799999988 468888876543 222211100 00 11223
Q ss_pred EEEE-eCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEE--c----CCCCCCCCCcEEEEECCEEEEEecc
Q 020682 173 GVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDS--I----PPLPSPRYSPATQLWRGRLHVMGGS 237 (322)
Q Consensus 173 ~~~~-~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~--~----~~~p~~r~~~~~~~~~~~Lyv~GG~ 237 (322)
++.. .++++|+|-| +..|++|...+.+.. + +.+|.. --++...++++|+|=|.
T Consensus 263 Ai~~~~~G~tYFFKg----------~~yWR~~~~~~~~~p~~Is~~WpglP~~--IDAAf~~~~~~yfFkG~ 322 (460)
T 1qhu_A 263 AMVSDNHGATYVFSG----------SHYWRLDTNRDGWHSWPIAHQWPQGPST--VDAAFSWEDKLYLIQDT 322 (460)
T ss_dssp EEEECTTCCEEEEET----------TEEEECTTGGGCCCCEEGGGTCTTSCSS--CSEEEEETTEEEEEETT
T ss_pred EEEecCCCeEEEEeC----------CEEEEEecCCCCcCccchhhhccCCCCC--CcEEEEECCeEEEEeCC
Confidence 4444 4789999987 456666654432211 1 233433 34555678899999664
No 158
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=69.05 E-value=15 Score=31.71 Aligned_cols=108 Identities=11% Similarity=-0.019 Sum_probs=57.6
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEEE-CCEEEEEeecCCCCCCcceeEEEECCCCceEEC-CCCCCCCCCceeEEE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDR-FDMPKDMAHSHLGVV 175 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~-~~~~~p~~r~~~~~~ 175 (322)
.+..||+.+.+...+...+ ...-..++.. ++++|+....+.. ....+++||+++..-..+ ..... ...-..++
T Consensus 67 ~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~i~ 141 (333)
T 2dg1_A 67 NIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGDFK--STGGIFAATENGDNLQDIIEDLST--AYCIDDMV 141 (333)
T ss_dssp EEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTTSS--SCCEEEEECTTSCSCEEEECSSSS--CCCEEEEE
T ss_pred EEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCCCC--CCceEEEEeCCCCEEEEEEccCcc--CCcccceE
Confidence 5778888777766543111 1112222322 5678887543211 113689999988776532 22211 22233444
Q ss_pred Ee-CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEc
Q 020682 176 SD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSI 212 (322)
Q Consensus 176 ~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~ 212 (322)
+. ++.+|+........ .....++.||+++.+...+
T Consensus 142 ~d~~g~l~v~~~~~~~~--~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 142 FDSKGGFYFTDFRGYST--NPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp ECTTSCEEEEECCCBTT--BCCEEEEEECTTSCCEEEE
T ss_pred ECCCCCEEEEecccccc--CCCceEEEEeCCCCEEEEe
Confidence 44 67788864321111 1136799999988776655
No 159
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=69.02 E-value=12 Score=32.95 Aligned_cols=112 Identities=13% Similarity=0.036 Sum_probs=54.9
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEEE-CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~ 176 (322)
.++.+|..+.+-+.+..-+. ...+....- +++.+++............++.+|......+.+..... .......+.
T Consensus 169 ~l~~~d~~~g~~~~l~~~~~-~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~--~~~~~~~~~ 245 (388)
T 3pe7_A 169 RLMRVDLKTGESTVILQENQ-WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAE--GESCTHEFW 245 (388)
T ss_dssp EEEEEETTTCCEEEEEEESS-CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCT--TEEEEEEEE
T ss_pred eEEEEECCCCceEEeecCCc-cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCC--CcccccceE
Confidence 46667776665444432111 112222222 34444443332222223469999998877766654332 111222223
Q ss_pred e-CC-EEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCC
Q 020682 177 D-GR-YIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLP 216 (322)
Q Consensus 177 ~-~~-~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p 216 (322)
. ++ .|+......+.. ...++.+|+.+.+-+.+..++
T Consensus 246 spdg~~l~~~~~~~~~~----~~~l~~~d~~~g~~~~l~~~~ 283 (388)
T 3pe7_A 246 VPDGSALVYVSYLKGSP----DRFIYSADPETLENRQLTSMP 283 (388)
T ss_dssp CTTSSCEEEEEEETTCC----CEEEEEECTTTCCEEEEEEEC
T ss_pred CCCCCEEEEEecCCCCC----cceEEEEecCCCceEEEEcCC
Confidence 2 44 454444322211 136999999998877665443
No 160
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=68.97 E-value=51 Score=32.07 Aligned_cols=181 Identities=8% Similarity=0.041 Sum_probs=81.6
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEEECCEEEEEeecCCCC-------CCcceeEEEECCCCce--EECCCCCCCCC
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLD-------YVHSHVDVYNFTDNKW--VDRFDMPKDMA 168 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~-------~~~~~v~~yd~~~~~W--~~~~~~~~p~~ 168 (322)
.+..+|..+++......++..........-+++.++++..+... ....++++++..+..- ..+...+.. +
T Consensus 148 ~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~-~ 226 (695)
T 2bkl_A 148 VLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD-P 226 (695)
T ss_dssp EEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC-T
T ss_pred EEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC-C
Confidence 46666766665431111111111111222255666666554321 1234699999887663 233222221 1
Q ss_pred CceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcc
Q 020682 169 HSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLE 247 (322)
Q Consensus 169 r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~ 247 (322)
....+.... +++..+++...+.. ..+++.+|..+..|+.+..-.... ...+.-+|.||+....+. ....+.
T Consensus 227 ~~~~~~~~SpDG~~l~~~~~~~~~----~~~l~~~~~~~~~~~~l~~~~~~~--~~~~~~~g~l~~~s~~~~--~~~~l~ 298 (695)
T 2bkl_A 227 TTFLQSDLSRDGKYLFVYILRGWS----ENDVYWKRPGEKDFRLLVKGVGAK--YEVHAWKDRFYVLTDEGA--PRQRVF 298 (695)
T ss_dssp TCEEEEEECTTSCCEEEEEEETTT----EEEEEEECTTCSSCEEEEECSSCC--EEEEEETTEEEEEECTTC--TTCEEE
T ss_pred EEEEEEEECCCCCEEEEEEeCCCC----ceEEEEEcCCCCceEEeecCCCce--EEEEecCCcEEEEECCCC--CCCEEE
Confidence 222333333 44444444333211 468888888888888875422222 122224566665543221 122344
Q ss_pred eEeeeeeccccccCceEeccCCC-CCcCceeEEEECCEEEEEecCC
Q 020682 248 HWSIAVKDGKALEKAWRTEIPIP-RGGPHRACFVFNDRLFVVGGQE 292 (322)
Q Consensus 248 ~~~~~v~~~~~~~~~W~~~~~~p-~~~~~~~~~~~~~~lyv~GG~~ 292 (322)
.++++ .++...|+.+.+-. .... ..+...+++|++....+
T Consensus 299 ~~d~~----~~~~~~~~~l~~~~~~~~l-~~~~~~~~~lv~~~~~d 339 (695)
T 2bkl_A 299 EVDPA----KPARASWKEIVPEDSSASL-LSVSIVGGHLSLEYLKD 339 (695)
T ss_dssp EEBTT----BCSGGGCEEEECCCSSCEE-EEEEEETTEEEEEEEET
T ss_pred EEeCC----CCCccCCeEEecCCCCCeE-EEEEEECCEEEEEEEEC
Confidence 44432 01122387764422 2211 12333477777666544
No 161
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=68.55 E-value=47 Score=27.09 Aligned_cols=135 Identities=15% Similarity=0.275 Sum_probs=69.4
Q ss_pred EEEEECCEEEEEeecCCCCCCcceeEEEECCCC--ceEE--C----CCCCCCCCCceeEEEEe--CCEEEEEecccCCCC
Q 020682 123 AAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDN--KWVD--R----FDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQC 192 (322)
Q Consensus 123 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~--~W~~--~----~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~ 192 (322)
+++.+++++|+|-| +.+|+++.... .... + +.+|. ... ++... ++++|+|-|
T Consensus 11 Ai~~~~g~~yfFkg--------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~---~ID-Aa~~~~~~~~~yfFkG------ 72 (195)
T 1itv_A 11 AIAEIGNQLYLFKD--------GKYWRFSEGRGSRPQGPFLIADKWPALPR---KLD-SVFEEPLSKKLFFFSG------ 72 (195)
T ss_dssp EEEEETTEEEEEET--------TEEEEECCSSSCCCEEEEEHHHHCTTSCS---SCS-EEEECTTTCCEEEEET------
T ss_pred EEEEeCCEEEEEEC--------CEEEEEECCccccCCCcEEhhhccCCCCC---Ccc-EEEEECCCCeEEEEeC------
Confidence 34567999999988 35888877652 2211 1 12332 222 23332 688999987
Q ss_pred CCCCceEEEEeCCCCcE-EEcC--CCCCC--CCCcEEEEECCEEEEEeccCCCCCCCCcceEeeeeeccc---cc--cCc
Q 020682 193 RGPTSRTFVLDSETRKW-DSIP--PLPSP--RYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGK---AL--EKA 262 (322)
Q Consensus 193 ~~~~~~v~~yd~~t~~W-~~~~--~~p~~--r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~---~~--~~~ 262 (322)
+..|+|+..+..- +.+. .+|.. ....+...-++++|+|-|.. .++|+.....-+ |. ++.
T Consensus 73 ----~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg~~-------ywr~d~~~~~~~~gyPr~i~~~ 141 (195)
T 1itv_A 73 ----RQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSGRR-------LWRFDVKAQMVDPRSASEVDRM 141 (195)
T ss_dssp ----TEEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEETTE-------EEEEETTTTEECGGGCEEHHHH
T ss_pred ----CEEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeCCE-------EEEEeCCcccccCCCccChhhc
Confidence 6677787543111 1121 13321 23333332367999997632 333432100000 10 123
Q ss_pred eEeccCCCCCcCceeEEEECCEEEEEecC
Q 020682 263 WRTEIPIPRGGPHRACFVFNDRLFVVGGQ 291 (322)
Q Consensus 263 W~~~~~~p~~~~~~~~~~~~~~lyv~GG~ 291 (322)
|. .+|..-. ++...++.+|+|-|.
T Consensus 142 w~---Gvp~~id--aa~~~~g~~Yffkg~ 165 (195)
T 1itv_A 142 FP---GVPLDTH--DVFQFREKAYFCQDR 165 (195)
T ss_dssp ST---TSCSSCS--EEEEETTEEEEEETT
T ss_pred CC---CCCCCCC--EEEEeCCeEEEEeCC
Confidence 42 2343333 566678999999883
No 162
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=68.35 E-value=61 Score=28.32 Aligned_cols=88 Identities=9% Similarity=0.128 Sum_probs=45.2
Q ss_pred eeEEEECCCCceEECCCCCCCCCCceeEEEEe---CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCc
Q 020682 146 HVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD---GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSP 222 (322)
Q Consensus 146 ~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~---~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~ 222 (322)
.+.++|+++.+-...-.... .. -.++... ++.+++.|+.+ ..+..||+.+.+....-.... ..-
T Consensus 177 ~v~lwd~~~~~~~~~~~~h~--~~-v~~~~~~~~~~g~~l~sgs~D--------g~v~~wd~~~~~~~~~~~~h~--~~v 243 (354)
T 2pbi_B 177 TCALWDVESGQLLQSFHGHG--AD-VLCLDLAPSETGNTFVSGGCD--------KKAMVWDMRSGQCVQAFETHE--SDV 243 (354)
T ss_dssp EEEEEETTTCCEEEEEECCS--SC-EEEEEECCCSSCCEEEEEETT--------SCEEEEETTTCCEEEEECCCS--SCE
T ss_pred cEEEEeCCCCeEEEEEcCCC--CC-eEEEEEEeCCCCCEEEEEeCC--------CeEEEEECCCCcEEEEecCCC--CCe
Confidence 57888988765432111111 11 1122222 34677777753 467789988876543321111 111
Q ss_pred EEEEE--CCEEEEEeccCCCCCCCCcceEee
Q 020682 223 ATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 223 ~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
..+.+ ++.+++.|+.++ .+..|++
T Consensus 244 ~~v~~~p~~~~l~s~s~D~-----~v~lwd~ 269 (354)
T 2pbi_B 244 NSVRYYPSGDAFASGSDDA-----TCRLYDL 269 (354)
T ss_dssp EEEEECTTSSEEEEEETTS-----CEEEEET
T ss_pred EEEEEeCCCCEEEEEeCCC-----eEEEEEC
Confidence 22233 466777777654 3666765
No 163
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=68.16 E-value=36 Score=28.65 Aligned_cols=97 Identities=7% Similarity=0.055 Sum_probs=47.4
Q ss_pred hccccccCCCCEEEC-CCCCC--CCc-ccEEEE-ECCEEEEEeecCC---------CCCCcceeEEEECCCCceEECCCC
Q 020682 98 TFADLPAPDLEWEQM-PSAPV--PRL-DGAAIQ-IKNLFYVFAGYGS---------LDYVHSHVDVYNFTDNKWVDRFDM 163 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~-~~~p~--~r~-~~~~~~-~~~~lyv~GG~~~---------~~~~~~~v~~yd~~~~~W~~~~~~ 163 (322)
.+..||+. .+...+ ..... +.. -..++. -++++|+...... .......+++||+. .+...+...
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~ 170 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA 170 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC
Confidence 46777776 666655 32211 111 122332 2567888654321 11112468999987 444433211
Q ss_pred CCCCCCceeEEEEe-----CC-EEEEEecccCCCCCCCCceEEEEeCC-CCc
Q 020682 164 PKDMAHSHLGVVSD-----GR-YIYIVSGQYGPQCRGPTSRTFVLDSE-TRK 208 (322)
Q Consensus 164 ~~p~~r~~~~~~~~-----~~-~Iyv~GG~~~~~~~~~~~~v~~yd~~-t~~ 208 (322)
. . ...++++. ++ .||+.... ...+++||++ +.+
T Consensus 171 ~---~-~~~~i~~~~~~d~dg~~l~v~~~~--------~~~i~~~~~~~~g~ 210 (314)
T 1pjx_A 171 F---Q-FPNGIAVRHMNDGRPYQLIVAETP--------TKKLWSYDIKGPAK 210 (314)
T ss_dssp E---S-SEEEEEEEECTTSCEEEEEEEETT--------TTEEEEEEEEETTE
T ss_pred C---C-CcceEEEecccCCCCCEEEEEECC--------CCeEEEEECCCCCc
Confidence 1 1 11233443 33 57776532 2678888875 443
No 164
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=68.12 E-value=54 Score=27.67 Aligned_cols=99 Identities=8% Similarity=0.139 Sum_probs=46.1
Q ss_pred CEEEEEecccCCCCCCCCceEEEEeCCC--CcEEEcCCCCCCCCCcEEEEEC-----CEEEEEeccCCCCCCCCcceEee
Q 020682 179 RYIYIVSGQYGPQCRGPTSRTFVLDSET--RKWDSIPPLPSPRYSPATQLWR-----GRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 179 ~~Iyv~GG~~~~~~~~~~~~v~~yd~~t--~~W~~~~~~p~~r~~~~~~~~~-----~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
+.+++.|+.++ .+..||..+ ..|..+..+..-...-..+.+. +.+++.|+.++ .+..|++
T Consensus 170 ~~~l~sgs~D~--------~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~-----~v~iWd~ 236 (297)
T 2pm7_B 170 SRKFVTGGADN--------LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDR-----TCIIWTQ 236 (297)
T ss_dssp CCEEEEEETTS--------CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS-----CEEEEEE
T ss_pred cceEEEEcCCC--------cEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCC-----cEEEEEe
Confidence 34666776543 344555544 3455443332211112223332 36777777644 4777775
Q ss_pred eeeccccccCceEeccC--C-CCCcCceeEEEECCEEEEEecCCCCC
Q 020682 252 AVKDGKALEKAWRTEIP--I-PRGGPHRACFVFNDRLFVVGGQEGDF 295 (322)
Q Consensus 252 ~v~~~~~~~~~W~~~~~--~-p~~~~~~~~~~~~~~lyv~GG~~~~~ 295 (322)
+ .....|....- . ............++++++.||.++..
T Consensus 237 ~-----~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v 278 (297)
T 2pm7_B 237 D-----NEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKV 278 (297)
T ss_dssp S-----STTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCE
T ss_pred C-----CCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcE
Confidence 4 22334543211 0 11111111122367788888877653
No 165
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=68.07 E-value=47 Score=29.70 Aligned_cols=60 Identities=15% Similarity=0.186 Sum_probs=36.6
Q ss_pred eEEEECCC--CceEECCCCCCCCCCceeEEEEe---CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcC
Q 020682 147 VDVYNFTD--NKWVDRFDMPKDMAHSHLGVVSD---GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP 213 (322)
Q Consensus 147 v~~yd~~~--~~W~~~~~~~~p~~r~~~~~~~~---~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~ 213 (322)
+++++... ++|+...+... ...-+++++. .+.||+.+.. +.. -..++..+....+|+++.
T Consensus 33 l~~~~~~~~g~~W~~~~~~~~--~~~v~~i~~dp~~~~~l~~g~~~-g~~----g~gl~~s~D~G~tW~~~~ 97 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGPVFL--GHTIHHIVQDPREPERMLMAART-GHL----GPTVFRSDDGGGNWTEAT 97 (394)
T ss_dssp EEEEEECTTSCSEEEEEEEST--TSEEEEEEECSSSTTCEEEEEEC---C----CEEEEEESSTTSCCEECS
T ss_pred eEEEECCCCCCCceECCccCC--CCceEEEEECCCCCCeEEEEecC-CCC----CccEEEeCCCCCCceECC
Confidence 67777655 78987642221 2344566665 5778886532 110 136778877788999986
No 166
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=67.99 E-value=55 Score=27.71 Aligned_cols=52 Identities=10% Similarity=0.197 Sum_probs=29.1
Q ss_pred CCEEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccCCCCC--cCceeEEEECCEEEEEecCCCC
Q 020682 228 RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRG--GPHRACFVFNDRLFVVGGQEGD 294 (322)
Q Consensus 228 ~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~--~~~~~~~~~~~~lyv~GG~~~~ 294 (322)
++++++.|+.++ .+..|++. +.+ .+..++.. ..-.+++ .++++++.||.++.
T Consensus 262 ~~~~l~~~~~dg-----~i~vwd~~-------~~~--~~~~~~~~h~~~v~~~~-~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 262 RHKFLYTAGSDG-----IISCWNLQ-------TRK--KIKNFAKFNEDSVVKIA-CSDNILCLATSDDT 315 (342)
T ss_dssp TTCCEEEEETTS-----CEEEEETT-------TTE--EEEECCCCSSSEEEEEE-ECSSEEEEEEECTH
T ss_pred CCCEEEEecCCc-----eEEEEcCc-------cHh--HhhhhhcccCCCceEec-CCCCeEEEEecCCc
Confidence 566677777543 36677642 332 22223321 1112344 78889999998876
No 167
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=67.48 E-value=20 Score=30.73 Aligned_cols=100 Identities=10% Similarity=0.049 Sum_probs=46.7
Q ss_pred CEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe---CCEEEEEecccCCCCCCCCceEEEEeCC
Q 020682 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD---GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~---~~~Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
+.+++.|+.+ ..+.+||..+..-........ .+.-..+... ++.+++.|+.+ ..+..+|..
T Consensus 153 ~~~l~sgs~D------~~v~iwd~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~l~s~s~D--------~~i~iWd~~ 216 (304)
T 2ynn_A 153 PSTFASGCLD------RTVKVWSLGQSTPNFTLTTGQ--ERGVNYVDYYPLPDKPYMITASDD--------LTIKIWDYQ 216 (304)
T ss_dssp TTEEEEEETT------SEEEEEETTCSSCSEEEECCC--TTCEEEEEECCSTTCCEEEEEETT--------SEEEEEETT
T ss_pred CCEEEEEeCC------CeEEEEECCCCCccceeccCC--cCcEEEEEEEEcCCCCEEEEEcCC--------CeEEEEeCC
Confidence 4566666654 347778876433111000111 1112222222 44556666542 567888888
Q ss_pred CCcEEEcCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEee
Q 020682 206 TRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 206 t~~W~~~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
+.+-... +......-..+.+ ++.+++.|+.++ .+..|++
T Consensus 217 ~~~~~~~--~~~h~~~v~~~~~~p~~~~l~s~s~Dg-----~i~iWd~ 257 (304)
T 2ynn_A 217 TKSCVAT--LEGHMSNVSFAVFHPTLPIIISGSEDG-----TLKIWNS 257 (304)
T ss_dssp TTEEEEE--EECCSSCEEEEEECSSSSEEEEEETTS-----CEEEEET
T ss_pred CCcccee--eCCCCCCEEEEEECCCCCEEEEEcCCC-----eEEEEEC
Confidence 7653221 1111111122222 455777777654 3677774
No 168
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=67.42 E-value=31 Score=33.15 Aligned_cols=98 Identities=18% Similarity=0.275 Sum_probs=53.5
Q ss_pred EEEeCCEEEEEecccCCCCCCCCceEEEEeC-CCCc--EEEcCCCCCC--------CCCcEEEEECCEEEEEeccCCCCC
Q 020682 174 VVSDGRYIYIVSGQYGPQCRGPTSRTFVLDS-ETRK--WDSIPPLPSP--------RYSPATQLWRGRLHVMGGSKENRH 242 (322)
Q Consensus 174 ~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~-~t~~--W~~~~~~p~~--------r~~~~~~~~~~~Lyv~GG~~~~~~ 242 (322)
-++.++.||+.... ...++.+|. ++.+ |+.-...+.. ......++.+++||+....
T Consensus 58 P~v~~g~vyv~~~~--------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d----- 124 (571)
T 2ad6_A 58 PLVIGDMMYVHSAF--------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN----- 124 (571)
T ss_dssp CEEETTEEEEECST--------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT-----
T ss_pred cEEECCEEEEEeCC--------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCC-----
Confidence 35679999997652 157899998 7765 8875432211 1122345678998886431
Q ss_pred CCCcceEeeeeeccccccCceEeccCCCC-C-cCceeEEEECCEEEEEec
Q 020682 243 TPGLEHWSIAVKDGKALEKAWRTEIPIPR-G-GPHRACFVFNDRLFVVGG 290 (322)
Q Consensus 243 ~~~~~~~~~~v~~~~~~~~~W~~~~~~p~-~-~~~~~~~~~~~~lyv~GG 290 (322)
..+..+|.+ ..+..|+....-+. . ....+.++.++++|+-.+
T Consensus 125 -g~l~alD~~-----tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~ 168 (571)
T 2ad6_A 125 -GHLLALDAK-----TGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCS 168 (571)
T ss_dssp -SEEEEEETT-----TCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECB
T ss_pred -CEEEEEECC-----CCCEEEEecCCCCCccceeccCCEEECCEEEEEec
Confidence 123333321 23446876422111 1 111234567888887654
No 169
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=67.09 E-value=70 Score=31.49 Aligned_cols=119 Identities=11% Similarity=0.076 Sum_probs=61.7
Q ss_pred hccccccCCCCEEECCCCCCCCcc--cEEEEE-CCEEEEEeecCCCCCCcceeEEEECCCCceEECC--CCCCCCCCcee
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLD--GAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRF--DMPKDMAHSHL 172 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~--~~~~p~~r~~~ 172 (322)
-+..||+.+.+++.+..-...... .++..- ++.|++. .. .-+.+||+++++++... .++. ..-.
T Consensus 494 Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~-------~Gl~~~~~~~~~~~~~~~~gl~~---~~i~ 562 (758)
T 3ott_A 494 GIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVG-FH-------GGVMRINPKDESQQSISFGSFSN---NEIL 562 (758)
T ss_dssp SEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEE-ET-------TEEEEECC--CCCCBCCCCC------CCEE
T ss_pred CcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEE-ec-------CceEEEecCCCceEEecccCCCc---cceE
Confidence 356777777777765321111111 122221 4677764 32 12788999988876653 2222 2334
Q ss_pred EEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEE-CCEEEEEeccCC
Q 020682 173 GVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMGGSKE 239 (322)
Q Consensus 173 ~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~~Lyv~GG~~~ 239 (322)
+++..++.|++... .-+.+||+++.+..... ++......++... +|.|| |||.++
T Consensus 563 ~i~~~~g~lWi~t~----------~Gl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~G~l~-fG~~~G 618 (758)
T 3ott_A 563 SMTCVKNSIWVSTT----------NGLWIIDRKTMDARQQN-MTNKRFTSLLFDPKEDCVY-LGGADG 618 (758)
T ss_dssp EEEEETTEEEEEES----------SCEEEEETTTCCEEEC---CCCCCSEEEEETTTTEEE-EECBSE
T ss_pred EEEECCCCEEEECC----------CCeEEEcCCCceeEEec-CCCCceeeeEEECCCCcEE-EecCCc
Confidence 45556888988542 55788999988876543 3333333222222 56666 566543
No 170
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=66.42 E-value=15 Score=31.34 Aligned_cols=78 Identities=14% Similarity=0.170 Sum_probs=39.5
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCC--CCceeEEEEe--CCEEEEEecccC--CCCCC-CCceEE
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDM--AHSHLGVVSD--GRYIYIVSGQYG--PQCRG-PTSRTF 200 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~--~r~~~~~~~~--~~~Iyv~GG~~~--~~~~~-~~~~v~ 200 (322)
++.+|+.++.+ ..++++|+.+.+-......+.+. ......+++. ++.||+.....+ ..... ....+.
T Consensus 45 g~~l~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~ 118 (337)
T 1pby_B 45 GRIAYATVNKS------ESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVA 118 (337)
T ss_dssp SSEEEEEETTT------TEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEE
T ss_pred CCEEEEEeCCC------CeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEE
Confidence 34777776532 36899999877643321221100 0011123343 457887752210 00000 137899
Q ss_pred EEeCCCCcEEE
Q 020682 201 VLDSETRKWDS 211 (322)
Q Consensus 201 ~yd~~t~~W~~ 211 (322)
.||+.+.+...
T Consensus 119 v~d~~~~~~~~ 129 (337)
T 1pby_B 119 LYDAETLSRRK 129 (337)
T ss_dssp EEETTTTEEEE
T ss_pred EEECCCCcEEE
Confidence 99998876543
No 171
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=66.25 E-value=55 Score=27.06 Aligned_cols=117 Identities=11% Similarity=0.097 Sum_probs=59.8
Q ss_pred hccccccCCCCEEECCCCCCCCc-ccEEEEE-CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRL-DGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVV 175 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~ 175 (322)
.+..||+. .+...+. ++.... -..++.. ++.+|+..... ..+.+||+. .+..... .+.. ...-.+++
T Consensus 42 ~v~~~~~~-~~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~------~~v~~~d~~-g~~~~~~-~~~~-~~~~~~i~ 110 (300)
T 2qc5_A 42 KISSLDQS-GRIKEFE-VPTPDAKVMCLIVSSLGDIWFTENGA------NKIGKLSKK-GGFTEYP-LPQP-DSGPYGIT 110 (300)
T ss_dssp EEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSCEEEEETTT------TEEEEECTT-SCEEEEE-CSST-TCCEEEEE
T ss_pred eEEEECCC-CceEEEE-CCCCCCcceeEEECCCCCEEEEecCC------CeEEEECCC-CCeEEec-CCCC-CCCCccce
Confidence 46677776 5555432 121111 2223322 46788864311 358899988 6665432 2211 22334555
Q ss_pred Ee-CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCC-cEEEE-ECCEEEEEe
Q 020682 176 SD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYS-PATQL-WRGRLHVMG 235 (322)
Q Consensus 176 ~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~-~~~~~-~~~~Lyv~G 235 (322)
+. ++.+|+.... ...+..||++ .+..... ++..... ..++. -+++||+..
T Consensus 111 ~~~~g~l~v~~~~--------~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~ 163 (300)
T 2qc5_A 111 EGLNGDIWFTQLN--------GDRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTE 163 (300)
T ss_dssp ECSTTCEEEEETT--------TTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEE
T ss_pred ECCCCCEEEEccC--------CCeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEe
Confidence 54 6789987532 2578889987 6655442 2211112 22333 246688764
No 172
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=65.37 E-value=39 Score=33.26 Aligned_cols=95 Identities=17% Similarity=0.244 Sum_probs=52.8
Q ss_pred EEeCCEEEEEecccCCCCCCCCceEEEEeCCCCc--EEEcCCCCCC--------CCCcEEEEECCEEEEEeccCCCCCCC
Q 020682 175 VSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK--WDSIPPLPSP--------RYSPATQLWRGRLHVMGGSKENRHTP 244 (322)
Q Consensus 175 ~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~~--------r~~~~~~~~~~~Lyv~GG~~~~~~~~ 244 (322)
++.++.||+... ...++.+|.+|.+ |+.-...+.. ....+.++.+++||+... + .
T Consensus 67 ~v~~g~vyv~~~---------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-d-----g 131 (689)
T 1yiq_A 67 IVVDGVMYTTGP---------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-D-----G 131 (689)
T ss_dssp EEETTEEEEECG---------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-T-----S
T ss_pred EEECCEEEEEcC---------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-C-----C
Confidence 467999999764 2578999988765 8875433211 112234567888887542 1 1
Q ss_pred CcceEeeeeeccccccCceEeccC-CCC--CcCceeEEEECCEEEEEe
Q 020682 245 GLEHWSIAVKDGKALEKAWRTEIP-IPR--GGPHRACFVFNDRLFVVG 289 (322)
Q Consensus 245 ~~~~~~~~v~~~~~~~~~W~~~~~-~p~--~~~~~~~~~~~~~lyv~G 289 (322)
.+..+|.+ ..+..|+.... -+. .....+.++.++++|+-.
T Consensus 132 ~l~AlDa~-----TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~ 174 (689)
T 1yiq_A 132 RLEAIDAK-----TGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGN 174 (689)
T ss_dssp EEEEEETT-----TCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECC
T ss_pred EEEEEECC-----CCCEeeeecCcCCCCCCccccCCcEEECCEEEEEe
Confidence 24444422 33455876432 111 111224456788887743
No 173
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=65.28 E-value=57 Score=26.88 Aligned_cols=90 Identities=18% Similarity=0.213 Sum_probs=51.3
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCce---EECCC--CCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEE
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKW---VDRFD--MPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFV 201 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W---~~~~~--~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~ 201 (322)
++++|+|-| +.+|+|+..+-.- +.+.. +|....+..++.... ++++|+|-| +..++
T Consensus 79 ~~~iyfFkG--------~~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG----------~~ywr 140 (207)
T 1pex_A 79 HDLIFIFRG--------RKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG----------NQVWR 140 (207)
T ss_dssp TTEEEEEET--------TEEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET----------TEEEE
T ss_pred CCcEEEEcc--------CEEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC----------CEEEE
Confidence 589999988 4688887432211 12322 221111233222222 489999987 68899
Q ss_pred EeCCCCcEEEc---------CCCCCCCCCcEEEEECCEEEEEecc
Q 020682 202 LDSETRKWDSI---------PPLPSPRYSPATQLWRGRLHVMGGS 237 (322)
Q Consensus 202 yd~~t~~W~~~---------~~~p~~r~~~~~~~~~~~Lyv~GG~ 237 (322)
||..+++=..- +.+| ..-.++...++++|.|-|.
T Consensus 141 ~d~~~~~~d~gyPr~i~~~~~Gip--~~iDaAf~~~g~~YfFkg~ 183 (207)
T 1pex_A 141 YDDTNHIMDKDYPRLIEEDFPGIG--DKVDAVYEKNGYIYFFNGP 183 (207)
T ss_dssp EETTTTEECSSCCCBHHHHSTTSC--SCCSEEEEETTEEEEEETT
T ss_pred EeCcCccccCCCCccHHHcCCCCC--CCccEEEEcCCcEEEEECC
Confidence 99876542211 1222 2233455679999999774
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=64.96 E-value=39 Score=32.35 Aligned_cols=107 Identities=9% Similarity=-0.041 Sum_probs=51.5
Q ss_pred ceeEEEECCC------CceEECC-CCCCCCCCceeEEEE-eCC-EEEEEecccCCCCCCCCceEEEEeCC-CC---cEEE
Q 020682 145 SHVDVYNFTD------NKWVDRF-DMPKDMAHSHLGVVS-DGR-YIYIVSGQYGPQCRGPTSRTFVLDSE-TR---KWDS 211 (322)
Q Consensus 145 ~~v~~yd~~~------~~W~~~~-~~~~p~~r~~~~~~~-~~~-~Iyv~GG~~~~~~~~~~~~v~~yd~~-t~---~W~~ 211 (322)
.+++++|..+ .+-+.+. .-.. .....+. -++ .|+... .+.....-...+++.+|.. +. +...
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~SpDG~~la~~~-~~~~~~~~~~~~i~~~d~~~~g~~~~~~~ 235 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHR----FVTGPRLSPDGRQAVWLA-WDHPRMPWEGTELKTARVTEDGRFADTRT 235 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSS----EECCCEECTTSSEEEEEE-ECTTCCTTTCEEEEEEEECTTSCEEEEEE
T ss_pred eEEEEEECCCCccccCCceeEEEecCCC----cccCceECCCCCEEEEEE-CCCCCCCCCCcEEEEEEECCCCcccccEE
Confidence 4799999988 6666654 2221 1112222 244 454443 3222110013689999998 56 4444
Q ss_pred cCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccC
Q 020682 212 IPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIP 268 (322)
Q Consensus 212 ~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~ 268 (322)
+..-.. .......+ +|+||+.+..++. .. +|.+++.+.+++.+.+
T Consensus 236 l~~~~~--~~~~~~~~spdg~l~~~~~~~~~-----~~-----l~~~~~~~~~~~~l~~ 282 (662)
T 3azo_A 236 LLGGPE--EAIAQAEWAPDGSLIVATDRTGW-----WN-----LHRVDPATGAATQLCR 282 (662)
T ss_dssp EEEETT--BCEEEEEECTTSCEEEEECTTSS-----CE-----EEEECTTTCCEEESSC
T ss_pred eCCCCC--ceEcceEECCCCeEEEEECCCCC-----eE-----EEEEECCCCceeeccc
Confidence 432111 11122222 6777776654321 11 2233344677776644
No 175
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=64.91 E-value=46 Score=34.24 Aligned_cols=92 Identities=13% Similarity=0.077 Sum_probs=49.7
Q ss_pred CCEEEEEeecCCCCCCcceeE-EEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVD-VYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~-~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
+++.+++++. ...++ +||..+.+-..+. .. ......++.. +++.+++++. -.+++.+|+.
T Consensus 347 dg~~l~~~s~------~~~l~~~~d~~~~~~~~l~--~~--~~~~~~~~~SpDG~~la~~~~--------~~~v~~~d~~ 408 (1045)
T 1k32_A 347 TKVAFIHGTR------EGDFLGIYDYRTGKAEKFE--EN--LGNVFAMGVDRNGKFAVVAND--------RFEIMTVDLE 408 (1045)
T ss_dssp SEEEEEEEET------TEEEEEEEETTTCCEEECC--CC--CCSEEEEEECTTSSEEEEEET--------TSEEEEEETT
T ss_pred CCCeEEEEEC------CCceEEEEECCCCCceEec--CC--ccceeeeEECCCCCEEEEECC--------CCeEEEEECC
Confidence 4454555443 24688 9999887766665 22 1222334443 5555555542 2588999999
Q ss_pred CCcEEEcCCCCCCCCCcEEEEECCEEEEEecc
Q 020682 206 TRKWDSIPPLPSPRYSPATQLWRGRLHVMGGS 237 (322)
Q Consensus 206 t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~ 237 (322)
+.+-..+..............-+++.+++++.
T Consensus 409 tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~ 440 (1045)
T 1k32_A 409 TGKPTVIERSREAMITDFTISDNSRFIAYGFP 440 (1045)
T ss_dssp TCCEEEEEECSSSCCCCEEECTTSCEEEEEEE
T ss_pred CCceEEeccCCCCCccceEECCCCCeEEEEec
Confidence 98876664222222122233335665555554
No 176
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=64.82 E-value=28 Score=29.25 Aligned_cols=90 Identities=11% Similarity=0.090 Sum_probs=44.5
Q ss_pred eeEEEECCCCceEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEE
Q 020682 146 HVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQ 225 (322)
Q Consensus 146 ~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~ 225 (322)
.+.++|..+..-........ .-........++.+++.+|.. -..+..||..+.+-. ..+..-...-..+
T Consensus 222 ~i~lwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~sg~~-------d~~i~iwd~~~~~~~--~~l~gH~~~V~~l 290 (318)
T 4ggc_A 222 HIRIWNVCSGACLSAVDAHS--QVCSILWSPHYKELISGHGFA-------QNQLVIWKYPTMAKV--AELKGHTSRVLSL 290 (318)
T ss_dssp EEEEEETTTCCEEEEEECSS--CEEEEEEETTTTEEEEEECTT-------TCCEEEEETTTCCEE--EEECCCSSCEEEE
T ss_pred EEEEEeccccccccccccee--eeeeeeecccccceEEEEEcC-------CCEEEEEECCCCcEE--EEEcCCCCCEEEE
Confidence 46677777665444322222 112222222356666665532 156788998876532 2221111111122
Q ss_pred EE--CCEEEEEeccCCCCCCCCcceEee
Q 020682 226 LW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 226 ~~--~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
.+ ++++++.||.++ .+..|++
T Consensus 291 ~~spdg~~l~S~s~D~-----~v~iWd~ 313 (318)
T 4ggc_A 291 TMSPDGATVASAAADE-----TLRLWRC 313 (318)
T ss_dssp EECTTSSCEEEEETTT-----EEEEECC
T ss_pred EEcCCCCEEEEEecCC-----eEEEEEC
Confidence 22 567777787654 3777774
No 177
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=64.61 E-value=99 Score=29.71 Aligned_cols=65 Identities=15% Similarity=0.054 Sum_probs=36.0
Q ss_pred ceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCCC-cEEEcC
Q 020682 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETR-KWDSIP 213 (322)
Q Consensus 145 ~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~-~W~~~~ 213 (322)
..++++|..+.+-..+...... ...-..++.. +++..+++..+.... ...++.+|+.+. ....+.
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~---~~~v~~~d~~~g~~~~~~~ 301 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPK-EKFLTNLSWSPDENILYVAEVNRAQN---ECKVNAYDAETGRFVRTLF 301 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCT-TCEEEEEEECTTSSEEEEEEECTTSC---EEEEEEEETTTCCEEEEEE
T ss_pred eEEEEEECCCCceEeeccCCCC-ceeEeeEEEECCCCEEEEEEeCCCCC---eeEEEEEECCCCceeeEEE
Confidence 4689999998776555432211 1222233332 444333433332221 368999999998 676653
No 178
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=63.97 E-value=36 Score=33.40 Aligned_cols=96 Identities=17% Similarity=0.207 Sum_probs=53.1
Q ss_pred EEEeCCEEEEEecccCCCCCCCCceEEEEeCCCCc--EEEcCCCCCC--------CCCcEEEEECCEEEEEeccCCCCCC
Q 020682 174 VVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK--WDSIPPLPSP--------RYSPATQLWRGRLHVMGGSKENRHT 243 (322)
Q Consensus 174 ~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~~--------r~~~~~~~~~~~Lyv~GG~~~~~~~ 243 (322)
-++.++.||+... ...++.+|.+|.+ |+.-...+.. ....+.++.+++||+... +
T Consensus 62 P~v~~g~vyv~~~---------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-d----- 126 (668)
T 1kv9_A 62 PLFHDGVIYTSMS---------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-D----- 126 (668)
T ss_dssp CEEETTEEEEEEG---------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-T-----
T ss_pred CEEECCEEEEECC---------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-C-----
Confidence 3567999999765 2678899988765 8875433211 012234567888887532 1
Q ss_pred CCcceEeeeeeccccccCceEeccCCCC--CcCceeEEEECCEEEEEe
Q 020682 244 PGLEHWSIAVKDGKALEKAWRTEIPIPR--GGPHRACFVFNDRLFVVG 289 (322)
Q Consensus 244 ~~~~~~~~~v~~~~~~~~~W~~~~~~p~--~~~~~~~~~~~~~lyv~G 289 (322)
..+..+|.+ ..+..|+....-+. .....+.++.++++|+..
T Consensus 127 g~l~alD~~-----tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~ 169 (668)
T 1kv9_A 127 GRLIALDAK-----TGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGN 169 (668)
T ss_dssp SEEEEEETT-----TCCEEEEEECSCTTSSCBCCSCCEEETTEEEECC
T ss_pred CEEEEEECC-----CCCEeeeeccCCCCCcceecCCCEEECCEEEEeC
Confidence 123344322 33456876432111 111223456788887753
No 179
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=62.23 E-value=1e+02 Score=28.65 Aligned_cols=102 Identities=5% Similarity=0.041 Sum_probs=54.8
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-----------CCEEEEEecccCCCCCCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-----------GRYIYIVSGQYGPQCRGPT 196 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-----------~~~Iyv~GG~~~~~~~~~~ 196 (322)
++++++.|+.+ ..+.+||..+.+-.......+ ...-.+++.. ++.+++.|+.+
T Consensus 499 ~g~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~h--~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~d-------- 562 (615)
T 1pgu_A 499 SETYIAAGDVM------GKILLYDLQSREVKTSRWAFR--TSKINAISWKPAEKGANEEEIEEDLVATGSLD-------- 562 (615)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTEEEECCSCCC--SSCEEEEEECCCC------CCSCCEEEEEETT--------
T ss_pred CCCEEEEcCCC------CeEEEeeCCCCcceeEeecCC--CCceeEEEEcCccccccccccCCCEEEEEcCC--------
Confidence 56777777753 348889998765433221112 1222233332 56677777643
Q ss_pred ceEEEEeCCCC--cEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceEeee
Q 020682 197 SRTFVLDSETR--KWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIA 252 (322)
Q Consensus 197 ~~v~~yd~~t~--~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~~ 252 (322)
..+..||..+. ....+..- ...-......-+++ ++.||.++ .+..|+++
T Consensus 563 g~i~iw~~~~~~~~~~~~~~h-~~~v~~l~~s~~~~-l~s~~~d~-----~v~iw~~~ 613 (615)
T 1pgu_A 563 TNIFIYSVKRPMKIIKALNAH-KDGVNNLLWETPST-LVSSGADA-----CIKRWNVV 613 (615)
T ss_dssp SCEEEEESSCTTCCEEETTSS-TTCEEEEEEEETTE-EEEEETTS-----CEEEEEEC
T ss_pred CcEEEEECCCCceechhhhcC-ccceEEEEEcCCCC-eEEecCCc-----eEEEEeee
Confidence 46788998875 23333211 11112223345778 77777644 37777764
No 180
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=62.00 E-value=69 Score=26.69 Aligned_cols=91 Identities=14% Similarity=0.234 Sum_probs=49.8
Q ss_pred EECCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCC--------CCCC--CceeEEEE---eCCEEEEEecccCCCC
Q 020682 126 QIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMP--------KDMA--HSHLGVVS---DGRYIYIVSGQYGPQC 192 (322)
Q Consensus 126 ~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~--------~p~~--r~~~~~~~---~~~~Iyv~GG~~~~~~ 192 (322)
..++++|+|-| +.+|+|+..++ .+..+..| .|.. ...--+|+ .++++|+|-|
T Consensus 70 ~~~~~~yfFkG--------~~yw~~~~~~~-~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG------ 134 (219)
T 1hxn_A 70 SWEDKLYLIQD--------TKVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG------ 134 (219)
T ss_dssp EETTEEEEEET--------TEEEEEECSSS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET------
T ss_pred EECCcEEEecC--------CEEEEEeCCCC-ceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC------
Confidence 35899999988 46999987532 11211111 1111 11122333 2689999988
Q ss_pred CCCCceEEEEeCCC---CcEEEcCCCCCCCCCcEEEE------------ECCEEEEEecc
Q 020682 193 RGPTSRTFVLDSET---RKWDSIPPLPSPRYSPATQL------------WRGRLHVMGGS 237 (322)
Q Consensus 193 ~~~~~~v~~yd~~t---~~W~~~~~~p~~r~~~~~~~------------~~~~Lyv~GG~ 237 (322)
+..+.||..+ ..|...+-+|. .-. ++.. .++.+|.|-|.
T Consensus 135 ----~~ywr~d~~~~P~~i~~~~~g~p~-~vd-Aa~~~~~~~~~~~~~~~~~~~YFFkg~ 188 (219)
T 1hxn_A 135 ----RRLWWLDLKSGAQATWTELPWPHE-KVD-GALCMEKPLGPNSCSTSGPNLYLIHGP 188 (219)
T ss_dssp ----TEEEEEEGGGGGGCCCEEECCSCS-CCS-EEEEESSCSSSCCSCSSSCEEEEEETT
T ss_pred ----CEEEEEeCCCCceEhhhcCCCCCC-CcC-EEEEccccccccceeccCCeEEEEECC
Confidence 6788999654 23443332222 222 3333 34678888774
No 181
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=61.65 E-value=33 Score=29.90 Aligned_cols=99 Identities=11% Similarity=0.219 Sum_probs=49.7
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe----CCEEEEEecccCCCCCCCCceEEEEe
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD----GRYIYIVSGQYGPQCRGPTSRTFVLD 203 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~----~~~Iyv~GG~~~~~~~~~~~~v~~yd 203 (322)
++.+++.|+.+ ..+.+||..+.+-......+. . ..++... ++.+++.|+.+ ..+..||
T Consensus 111 ~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~--------~~v~~~d 172 (408)
T 4a11_B 111 DTGMFTSSSFD------KTLKVWDTNTLQTADVFNFEE--T--VYSHHMSPVSTKHCLVAVGTRG--------PKVQLCD 172 (408)
T ss_dssp CTTCEEEEETT------SEEEEEETTTTEEEEEEECSS--C--EEEEEECSSCSSCCEEEEEESS--------SSEEEEE
T ss_pred CCcEEEEEeCC------CeEEEeeCCCCccceeccCCC--c--eeeeEeecCCCCCcEEEEEcCC--------CeEEEEe
Confidence 44566677643 358888988776544333332 1 1222222 33466666542 5677888
Q ss_pred CCCCcEEEcCCCCCCCCCcEEEEE--CCE-EEEEeccCCCCCCCCcceEee
Q 020682 204 SETRKWDSIPPLPSPRYSPATQLW--RGR-LHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 204 ~~t~~W~~~~~~p~~r~~~~~~~~--~~~-Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
+.+.+-... +.........+.+ ++. +++.|+.++ .+..|++
T Consensus 173 ~~~~~~~~~--~~~~~~~v~~~~~~~~~~~ll~~~~~dg-----~i~i~d~ 216 (408)
T 4a11_B 173 LKSGSCSHI--LQGHRQEILAVSWSPRYDYILATASADS-----RVKLWDV 216 (408)
T ss_dssp SSSSCCCEE--ECCCCSCEEEEEECSSCTTEEEEEETTS-----CEEEEET
T ss_pred CCCcceeee--ecCCCCcEEEEEECCCCCcEEEEEcCCC-----cEEEEEC
Confidence 876542211 1111111122222 233 777777654 3566664
No 182
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=61.48 E-value=36 Score=30.30 Aligned_cols=95 Identities=14% Similarity=0.115 Sum_probs=45.5
Q ss_pred CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEE-ECCEEEEEeccCCCCCCCCcceEeeeeecc
Q 020682 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQL-WRGRLHVMGGSKENRHTPGLEHWSIAVKDG 256 (322)
Q Consensus 178 ~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~ 256 (322)
+++.++.|+.+ ..+..||..+.+-...-..... .-..+.. -++..++.|+.++ .+..|++.
T Consensus 134 dg~~l~s~~~d--------~~i~iwd~~~~~~~~~~~~h~~-~v~~~~~~p~~~~l~s~s~d~-----~v~iwd~~---- 195 (393)
T 1erj_A 134 DGKFLATGAED--------RLIRIWDIENRKIVMILQGHEQ-DIYSLDYFPSGDKLVSGSGDR-----TVRIWDLR---- 195 (393)
T ss_dssp TSSEEEEEETT--------SCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTS-----EEEEEETT----
T ss_pred CCCEEEEEcCC--------CeEEEEECCCCcEEEEEccCCC-CEEEEEEcCCCCEEEEecCCC-----cEEEEECC----
Confidence 56666777643 5677889887764433111111 1111222 1455566666543 36667643
Q ss_pred ccccCceEeccCCCCCcCceeEEEE--CCEEEEEecCCCCC
Q 020682 257 KALEKAWRTEIPIPRGGPHRACFVF--NDRLFVVGGQEGDF 295 (322)
Q Consensus 257 ~~~~~~W~~~~~~p~~~~~~~~~~~--~~~lyv~GG~~~~~ 295 (322)
+.+............ .++.. ++++++.|+.++..
T Consensus 196 ---~~~~~~~~~~~~~v~--~~~~~~~~~~~l~~~s~d~~v 231 (393)
T 1erj_A 196 ---TGQCSLTLSIEDGVT--TVAVSPGDGKYIAAGSLDRAV 231 (393)
T ss_dssp ---TTEEEEEEECSSCEE--EEEECSTTCCEEEEEETTSCE
T ss_pred ---CCeeEEEEEcCCCcE--EEEEECCCCCEEEEEcCCCcE
Confidence 333222111111111 22222 66777888777653
No 183
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=60.78 E-value=87 Score=27.47 Aligned_cols=65 Identities=3% Similarity=-0.057 Sum_probs=34.5
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
++++++.|+.+ ..+.+||..+.+-.. .+... ...-.+++.. ++..++.|+.+ ..+..||+.+
T Consensus 150 ~~~~l~s~s~d------~~i~iwd~~~~~~~~--~~~~h-~~~v~~~~~~~~~~~l~s~~~d--------~~v~iwd~~~ 212 (420)
T 3vl1_A 150 SGEALISSSQD------MQLKIWSVKDGSNPR--TLIGH-RATVTDIAIIDRGRNVLSASLD--------GTIRLWECGT 212 (420)
T ss_dssp TSSEEEEEETT------SEEEEEETTTCCCCE--EEECC-SSCEEEEEEETTTTEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCcCce--EEcCC-CCcEEEEEEcCCCCEEEEEcCC--------CcEEEeECCC
Confidence 45566667643 358889987654211 11110 1122233343 45555566643 4577888887
Q ss_pred CcE
Q 020682 207 RKW 209 (322)
Q Consensus 207 ~~W 209 (322)
.+-
T Consensus 213 ~~~ 215 (420)
T 3vl1_A 213 GTT 215 (420)
T ss_dssp TEE
T ss_pred Cce
Confidence 653
No 184
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=60.18 E-value=84 Score=27.11 Aligned_cols=66 Identities=11% Similarity=0.076 Sum_probs=42.0
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEE-eCCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~-~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
++.+|+.+..+ ..+++||+++.+..... .+. .. .+++. -++.+|+... ..++.||+++
T Consensus 60 ~~~l~~~d~~~------~~i~~~d~~~~~~~~~~-~~~---~v-~~i~~~~dg~l~v~~~----------~gl~~~d~~~ 118 (326)
T 2ghs_A 60 SGTAWWFNILE------RELHELHLASGRKTVHA-LPF---MG-SALAKISDSKQLIASD----------DGLFLRDTAT 118 (326)
T ss_dssp TTEEEEEEGGG------TEEEEEETTTTEEEEEE-CSS---CE-EEEEEEETTEEEEEET----------TEEEEEETTT
T ss_pred CCEEEEEECCC------CEEEEEECCCCcEEEEE-CCC---cc-eEEEEeCCCeEEEEEC----------CCEEEEECCC
Confidence 46788886532 36899999887655432 221 22 23333 4788887541 4589999999
Q ss_pred CcEEEcCC
Q 020682 207 RKWDSIPP 214 (322)
Q Consensus 207 ~~W~~~~~ 214 (322)
.+.+.+..
T Consensus 119 g~~~~~~~ 126 (326)
T 2ghs_A 119 GVLTLHAE 126 (326)
T ss_dssp CCEEEEEC
T ss_pred CcEEEEee
Confidence 98877644
No 185
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=59.09 E-value=36 Score=28.60 Aligned_cols=62 Identities=11% Similarity=0.161 Sum_probs=32.1
Q ss_pred CCEEEEEecccCCCCCCCCceEEEEeCCC--CcEEEcCCCCCCCCCcEEEEE----CCEEEEEeccCCCCCCCCcceEee
Q 020682 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSET--RKWDSIPPLPSPRYSPATQLW----RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 178 ~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t--~~W~~~~~~p~~r~~~~~~~~----~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
++.+++.|+.+ ..+..||..+ ..++.+..+......-..+.+ ++.+++.|+.++ .+..|++
T Consensus 22 ~~~~l~~~~~d--------g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg-----~v~vwd~ 88 (351)
T 3f3f_A 22 YGRHVATCSSD--------QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK-----TVKLWEE 88 (351)
T ss_dssp SSSEEEEEETT--------SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS-----CEEEEEE
T ss_pred CCCEEEEeeCC--------CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC-----eEEEEec
Confidence 45566666643 4566666653 345544333222222223333 366777887654 3677776
Q ss_pred e
Q 020682 252 A 252 (322)
Q Consensus 252 ~ 252 (322)
.
T Consensus 89 ~ 89 (351)
T 3f3f_A 89 D 89 (351)
T ss_dssp C
T ss_pred C
Confidence 4
No 186
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=58.67 E-value=86 Score=26.74 Aligned_cols=64 Identities=8% Similarity=0.066 Sum_probs=34.2
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEE-CCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD-RFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~-~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
+++.++.|+.+ ..+.+||..+.+-.. +..-. ..-.+++.. ++.+++.|+.+ ..+..||.+
T Consensus 76 dg~~l~s~s~D------~~v~~wd~~~~~~~~~~~~h~----~~v~~~~~~~~~~~l~s~s~D--------~~i~vwd~~ 137 (319)
T 3frx_A 76 DGAYALSASWD------KTLRLWDVATGETYQRFVGHK----SDVMSVDIDKKASMIISGSRD--------KTIKVWTIK 137 (319)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEEEECCS----SCEEEEEECTTSCEEEEEETT--------SCEEEEETT
T ss_pred CCCEEEEEeCC------CEEEEEECCCCCeeEEEccCC----CcEEEEEEcCCCCEEEEEeCC--------CeEEEEECC
Confidence 45566666654 358888988765322 11111 112233333 55666777653 356677776
Q ss_pred CCcE
Q 020682 206 TRKW 209 (322)
Q Consensus 206 t~~W 209 (322)
...-
T Consensus 138 ~~~~ 141 (319)
T 3frx_A 138 GQCL 141 (319)
T ss_dssp SCEE
T ss_pred CCeE
Confidence 5443
No 187
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=58.65 E-value=1.1e+02 Score=29.62 Aligned_cols=78 Identities=14% Similarity=0.066 Sum_probs=47.7
Q ss_pred EEECCEEEEEeecCCCCCCcceeEEEECCCC---ceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEE
Q 020682 125 IQIKNLFYVFAGYGSLDYVHSHVDVYNFTDN---KWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTF 200 (322)
Q Consensus 125 ~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~---~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~ 200 (322)
...++.||+.+..+... ..++++|+.+. .|+.+.+... ...-..++.. ++.+++....++ ...++
T Consensus 294 s~dg~~l~~~s~~~~~~---~~l~~~d~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~lv~~~~~~g------~~~l~ 362 (710)
T 2xdw_A 294 TNEGTVFTFKTNRHSPN---YRLINIDFTDPEESKWKVLVPEHE--KDVLEWVACVRSNFLVLCYLHDV------KNTLQ 362 (710)
T ss_dssp EEETTEEEEEECTTCTT---CEEEEEETTSCCGGGCEEEECCCS--SCEEEEEEEETTTEEEEEEEETT------EEEEE
T ss_pred eccCCEEEEEECCCCCC---CEEEEEeCCCCCcccceeccCCCC--CCeEEEEEEEcCCEEEEEEEECC------EEEEE
Confidence 34578888887653322 36899998865 4877644321 1222334445 778887765433 36789
Q ss_pred EEeCCCCc-EEEcC
Q 020682 201 VLDSETRK-WDSIP 213 (322)
Q Consensus 201 ~yd~~t~~-W~~~~ 213 (322)
.+|+.+++ ...+.
T Consensus 363 ~~~~~~g~~~~~l~ 376 (710)
T 2xdw_A 363 LHDLATGALLKIFP 376 (710)
T ss_dssp EEETTTCCEEEEEC
T ss_pred EEECCCCCEEEecC
Confidence 99986655 44543
No 188
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=58.24 E-value=38 Score=29.54 Aligned_cols=64 Identities=5% Similarity=-0.058 Sum_probs=35.7
Q ss_pred ceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CC-EEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCC
Q 020682 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GR-YIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP 214 (322)
Q Consensus 145 ~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~-~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 214 (322)
..++++|+.+.+...+.... ....+....- ++ +|+.... .... .....++.+|..+.++..+..
T Consensus 168 ~~l~~~d~~~g~~~~~~~~~---~~~~~~~~sp~dg~~l~~~~~-~~~~--~~~~~l~~~d~~~~~~~~l~~ 233 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQDT---AWLGHPIYRPFDDSTVGFCHE-GPHD--LVDARMWLVNEDGSNVRKIKE 233 (396)
T ss_dssp EEEEEEETTTCCEEEEEEES---SCEEEEEEETTEEEEEEEEEC-SCSS--SCSCCCEEEETTSCCCEESSC
T ss_pred ceEEEEECCCCcEEeeccCC---cccccceECCCCCCEEEEEec-CCCC--CCCceEEEEECCCCceeEeec
Confidence 46899999888776654322 1222222222 34 3544432 1111 112689999998888877754
No 189
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=58.15 E-value=74 Score=25.86 Aligned_cols=93 Identities=14% Similarity=0.118 Sum_probs=50.2
Q ss_pred ECCEEEEEeecCCCCCCcceeEEEECCCCce---EECCCCC--CCCCCceeEEEE-eCCEEEEEecccCCCCCCCCceEE
Q 020682 127 IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKW---VDRFDMP--KDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTF 200 (322)
Q Consensus 127 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W---~~~~~~~--~p~~r~~~~~~~-~~~~Iyv~GG~~~~~~~~~~~~v~ 200 (322)
.++++|+|-| +.+|+||..+... +.+...- .|..+..++... .++++|+|-| +..+
T Consensus 60 ~~g~~yfFkg--------~~yw~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG----------~~yw 121 (196)
T 3c7x_A 60 KDGKFVFFKG--------DKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG----------NKYY 121 (196)
T ss_dssp TTSCEEEEET--------TEEEEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET----------TEEE
T ss_pred CCCcEEEecC--------CEEEEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC----------CEEE
Confidence 4688999988 4689998543211 1222211 111223322222 2689999987 6788
Q ss_pred EEeCCCCcEEE-----cCCC-CCCCCCcEEEEE-CC-EEEEEecc
Q 020682 201 VLDSETRKWDS-----IPPL-PSPRYSPATQLW-RG-RLHVMGGS 237 (322)
Q Consensus 201 ~yd~~t~~W~~-----~~~~-p~~r~~~~~~~~-~~-~Lyv~GG~ 237 (322)
+||..+++-.. +... ..+..-.++..+ ++ ++|.+-|.
T Consensus 122 ~yd~~~~~v~~gyPk~i~~~~gip~~idaAf~~~~~~~~YfFkg~ 166 (196)
T 3c7x_A 122 RFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKGN 166 (196)
T ss_dssp EEETTTTEECTTCSEEGGGSBTCCSSCSEEEECTTSSEEEEEETT
T ss_pred EEeCCcccccCCCCccHHHCCCcCCCcceeEEecCCCEEEEEECC
Confidence 99987754321 1111 112223444455 44 89998774
No 190
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=57.68 E-value=98 Score=27.12 Aligned_cols=131 Identities=5% Similarity=-0.003 Sum_probs=63.6
Q ss_pred eeEEEECCCCceEECCCCCCCCCCceeEEE-EeCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcC--CCCCCCCCc
Q 020682 146 HVDVYNFTDNKWVDRFDMPKDMAHSHLGVV-SDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP--PLPSPRYSP 222 (322)
Q Consensus 146 ~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~-~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~--~~p~~r~~~ 222 (322)
.+.+++..+..-......... ...-.+++ .-++..++.++.++... ..+..+|.......... .+......-
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~-~~~v~~v~fspdg~~l~~~s~d~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~V 272 (365)
T 4h5i_A 198 SLEVISTVTGSCIARKTDFDK-NWSLSKINFIADDTVLIAASLKKGKG----IVLTKISIKSGNTSVLRSKQVTNRFKGI 272 (365)
T ss_dssp CEEEEETTTCCEEEEECCCCT-TEEEEEEEEEETTEEEEEEEESSSCC----EEEEEEEEETTEEEEEEEEEEESSCSCE
T ss_pred eEEEEEeccCcceeeeecCCC-CCCEEEEEEcCCCCEEEEEecCCcce----eEEeecccccceecceeeeeecCCCCCe
Confidence 366677666554332222211 11112222 23777777777654332 45667777666554332 111111111
Q ss_pred EEE--EECCEEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccCCCCCcCc---eeEEEECCEEEEEecCCCCC
Q 020682 223 ATQ--LWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPH---RACFVFNDRLFVVGGQEGDF 295 (322)
Q Consensus 223 ~~~--~~~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~~~~---~~~~~~~~~lyv~GG~~~~~ 295 (322)
..+ .-++++++.|+.++ .+..|+++ +. ..+..+.++... .....-++++++-|+.++..
T Consensus 273 ~~~~~Spdg~~lasgs~D~-----~V~iwd~~-------~~--~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tv 336 (365)
T 4h5i_A 273 TSMDVDMKGELAVLASNDN-----SIALVKLK-------DL--SMSKIFKQAHSFAITEVTISPDSTYVASVSAANTI 336 (365)
T ss_dssp EEEEECTTSCEEEEEETTS-----CEEEEETT-------TT--EEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEE
T ss_pred EeEEECCCCCceEEEcCCC-----EEEEEECC-------CC--cEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeE
Confidence 122 23678888888754 47777743 32 233222222211 11222378888888887653
No 191
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=57.17 E-value=25 Score=30.00 Aligned_cols=81 Identities=15% Similarity=0.167 Sum_probs=40.5
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCC-ceEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCC-
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDN-KWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSE- 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~-~W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~- 205 (322)
++.||+... + +++||+..+ .|....... .. ...++.++.||+... ...++.||++
T Consensus 70 ~g~l~v~t~--------~-l~~~d~~g~~~~~~~~~~~---~~--~~~~~~~~~l~v~t~---------~~~l~~~d~~g 126 (330)
T 3hxj_A 70 DGTIYFGSD--------K-VYAINPDGTEKWRFDTKKA---IV--SDFTIFEDILYVTSM---------DGHLYAINTDG 126 (330)
T ss_dssp TTEECCSSC--------E-EEEECCCGGGGGGSCC----------CCEEEETTEEEEECT---------TSEEEEECTTS
T ss_pred CCcEEEecC--------c-EEEECCCCcEEEEEECCCC---cc--cCceEECCEEEEEec---------CCEEEEEcCCC
Confidence 567776321 2 888987433 354321111 11 122334888988432 2578889987
Q ss_pred CCcEEEcCCCCCCCCCcEEEEE-CCEEEEE
Q 020682 206 TRKWDSIPPLPSPRYSPATQLW-RGRLHVM 234 (322)
Q Consensus 206 t~~W~~~~~~p~~r~~~~~~~~-~~~Lyv~ 234 (322)
...|+...+.+. ..+.+.. ++.||+-
T Consensus 127 ~~~~~~~~~~~~---~~~~~~~~~g~l~vg 153 (330)
T 3hxj_A 127 TEKWRFKTKKAI---YATPIVSEDGTIYVG 153 (330)
T ss_dssp CEEEEEECSSCC---CSCCEECTTSCEEEE
T ss_pred CEEEEEcCCCce---eeeeEEcCCCEEEEE
Confidence 335765432211 1222333 5666663
No 192
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=56.75 E-value=1.4e+02 Score=28.68 Aligned_cols=139 Identities=11% Similarity=0.113 Sum_probs=62.6
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
++++++.|+.+ ..+.++|..+.+-...-.. + ...-.+++.. ++..++.|+.+ ..+..+|...
T Consensus 441 ~g~~l~sgs~D------g~v~vwd~~~~~~~~~~~~-h--~~~v~~~~~s~~~~~l~s~s~D--------~~i~iwd~~~ 503 (694)
T 3dm0_A 441 DGQFALSGSWD------GELRLWDLAAGVSTRRFVG-H--TKDVLSVAFSLDNRQIVSASRD--------RTIKLWNTLG 503 (694)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEEEEC-C--SSCEEEEEECTTSSCEEEEETT--------SCEEEECTTS
T ss_pred CCCEEEEEeCC------CcEEEEECCCCcceeEEeC-C--CCCEEEEEEeCCCCEEEEEeCC--------CEEEEEECCC
Confidence 45566666643 3578888876543221111 1 1112233333 45556666643 4566777655
Q ss_pred CcEEEcCCCCCC-CCCcEEEEE--CC--EEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccCCCCCcCceeEEEE
Q 020682 207 RKWDSIPPLPSP-RYSPATQLW--RG--RLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVF 281 (322)
Q Consensus 207 ~~W~~~~~~p~~-r~~~~~~~~--~~--~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~~~~~~~~~~ 281 (322)
..=..+...... +.....+.+ ++ .+++.|+.++ .+..|++. +..-...-.-...........-
T Consensus 504 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~-----~v~vwd~~-------~~~~~~~~~~h~~~v~~v~~sp 571 (694)
T 3dm0_A 504 ECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDK-----TVKVWNLS-------NCKLRSTLAGHTGYVSTVAVSP 571 (694)
T ss_dssp CEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTS-----CEEEEETT-------TCCEEEEECCCSSCEEEEEECT
T ss_pred CcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCC-----eEEEEECC-------CCcEEEEEcCCCCCEEEEEEeC
Confidence 432222221111 111222333 22 3566666543 46777753 2222211111111111112223
Q ss_pred CCEEEEEecCCCCC
Q 020682 282 NDRLFVVGGQEGDF 295 (322)
Q Consensus 282 ~~~lyv~GG~~~~~ 295 (322)
++++++.||.++..
T Consensus 572 dg~~l~sg~~Dg~i 585 (694)
T 3dm0_A 572 DGSLCASGGKDGVV 585 (694)
T ss_dssp TSSEEEEEETTSBC
T ss_pred CCCEEEEEeCCCeE
Confidence 67788888877654
No 193
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=56.72 E-value=1.6e+02 Score=29.12 Aligned_cols=81 Identities=20% Similarity=0.274 Sum_probs=48.9
Q ss_pred CCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCC-CCceEEEEeCCCCcEEEcCCCCCC----CCCcEEEEE
Q 020682 154 DNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRG-PTSRTFVLDSETRKWDSIPPLPSP----RYSPATQLW 227 (322)
Q Consensus 154 ~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~-~~~~v~~yd~~t~~W~~~~~~p~~----r~~~~~~~~ 227 (322)
-.+|+.+..+|. ....+.+++. ++.+|+..+........ ....+++++....+|+++.+.|.. +++.+...+
T Consensus 231 G~tW~~~~~~p~--~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~~~~i~v 308 (737)
T 2cn3_A 231 GVTWKAVPGQPK--GLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCFAGLAV 308 (737)
T ss_dssp TSCCEECTTCCC--SSEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSSCTTSTTCCSEEEEEEE
T ss_pred CCceEECCCCCC--cccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCCCCCCcccccccccEEE
Confidence 567999886654 3333444444 78899876432111000 146899999999999999876542 333333333
Q ss_pred ----CCEEEEEec
Q 020682 228 ----RGRLHVMGG 236 (322)
Q Consensus 228 ----~~~Lyv~GG 236 (322)
.+.||+.+.
T Consensus 309 ~p~~~~~ly~~~~ 321 (737)
T 2cn3_A 309 DRQNPDIIMVTSM 321 (737)
T ss_dssp CTTCTTCEEEEEE
T ss_pred cCCCCCEEEEEec
Confidence 256887764
No 194
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=55.98 E-value=93 Score=26.32 Aligned_cols=63 Identities=5% Similarity=-0.027 Sum_probs=38.0
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEE---eCCEEEEEecccCCCCCCCCceEEEEeC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS---DGRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~---~~~~Iyv~GG~~~~~~~~~~~~v~~yd~ 204 (322)
+++.++.|+.+ ..+.+||..+.+-........ .-.+++. .++.+++.|+.+ ..+..||+
T Consensus 97 ~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~l~~~~~d--------g~i~vwd~ 158 (368)
T 3mmy_A 97 DGSKVFTASCD------KTAKMWDLSSNQAIQIAQHDA----PVKTIHWIKAPNYSCVMTGSWD--------KTLKFWDT 158 (368)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEEEECSS----CEEEEEEEECSSCEEEEEEETT--------SEEEEECS
T ss_pred CCCEEEEEcCC------CcEEEEEcCCCCceeeccccC----ceEEEEEEeCCCCCEEEEccCC--------CcEEEEEC
Confidence 45566666643 358889998887655433222 2223333 356777777753 56788888
Q ss_pred CCCc
Q 020682 205 ETRK 208 (322)
Q Consensus 205 ~t~~ 208 (322)
.+.+
T Consensus 159 ~~~~ 162 (368)
T 3mmy_A 159 RSSN 162 (368)
T ss_dssp SCSS
T ss_pred CCCc
Confidence 7764
No 195
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=55.54 E-value=93 Score=26.19 Aligned_cols=102 Identities=8% Similarity=0.024 Sum_probs=52.0
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCc----eEECCCCCCCCCCceeEEEEe-CCE-EEEEecccCCCCCCCCceEEE
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK----WVDRFDMPKDMAHSHLGVVSD-GRY-IYIVSGQYGPQCRGPTSRTFV 201 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~----W~~~~~~~~p~~r~~~~~~~~-~~~-Iyv~GG~~~~~~~~~~~~v~~ 201 (322)
++.+++.|+.+ ..+.+||..+.. -....... ..-.+++.. ++. +++.|+.+ ..+..
T Consensus 22 ~~~~l~~~~~d------~~v~iw~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~l~~~~~d--------g~i~~ 83 (342)
T 1yfq_A 22 SKSLLLITSWD------GSLTVYKFDIQAKNVDLLQSLRYK----HPLLCCNFIDNTDLQIYVGTVQ--------GEILK 83 (342)
T ss_dssp GGTEEEEEETT------SEEEEEEEETTTTEEEEEEEEECS----SCEEEEEEEESSSEEEEEEETT--------SCEEE
T ss_pred CCCEEEEEcCC------CeEEEEEeCCCCccccceeeeecC----CceEEEEECCCCCcEEEEEcCC--------CeEEE
Confidence 44555666643 357777776655 33222111 122233333 555 56666642 56888
Q ss_pred EeC-CCCcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceEeee
Q 020682 202 LDS-ETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIA 252 (322)
Q Consensus 202 yd~-~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~~ 252 (322)
||. .+.+-..+...+....-..+....+.+++.|+.++ .+..|++.
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~-----~i~iwd~~ 130 (342)
T 1yfq_A 84 VDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDG-----LIEVIDPR 130 (342)
T ss_dssp ECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTS-----EEEEECHH
T ss_pred EEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCCC-----eEEEEccc
Confidence 999 88877666541111111222323255666666543 36666643
No 196
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=54.39 E-value=1.1e+02 Score=26.76 Aligned_cols=91 Identities=9% Similarity=0.070 Sum_probs=43.5
Q ss_pred eeEEEECCCCceEECCCCCCCCCC--ceeEEEE--eCCEEEEEecccCCCCCCCCceEEEEeCCCC--cEEEcCCCCCCC
Q 020682 146 HVDVYNFTDNKWVDRFDMPKDMAH--SHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSETR--KWDSIPPLPSPR 219 (322)
Q Consensus 146 ~v~~yd~~~~~W~~~~~~~~p~~r--~~~~~~~--~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~--~W~~~~~~p~~r 219 (322)
.+.+||..+.+-........+... .-.+++. .++.+++.|+.+ ..+..||+... .-..+..- ...
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D--------~~v~~wd~~~~~~~~~~~~~h-~~~ 251 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD--------TTVRLWDLRITSRAVRTYHGH-EGD 251 (380)
T ss_dssp CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT--------SCEEEEETTTTCCCCEEECCC-SSC
T ss_pred cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC--------CeEEEEECCCCCcceEEECCc-CCC
Confidence 477888887664432211111011 1222333 256788888754 45677887532 11111110 111
Q ss_pred CCcEEEE-ECCEEEEEeccCCCCCCCCcceEee
Q 020682 220 YSPATQL-WRGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 220 ~~~~~~~-~~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
-..++. -+++.++.|+.++ .+..|++
T Consensus 252 -v~~v~~~p~~~~l~s~s~D~-----~i~lwd~ 278 (380)
T 3iz6_a 252 -INSVKFFPDGQRFGTGSDDG-----TCRLFDM 278 (380)
T ss_dssp -CCEEEECTTSSEEEEECSSS-----CEEEEET
T ss_pred -eEEEEEecCCCeEEEEcCCC-----eEEEEEC
Confidence 112222 2566777887654 3667775
No 197
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=54.33 E-value=55 Score=26.65 Aligned_cols=62 Identities=15% Similarity=0.192 Sum_probs=38.4
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEE-----CCCCCCCCCCceeEEEEe-CC-EEEEEecccCCCCCCCCceEE
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD-----RFDMPKDMAHSHLGVVSD-GR-YIYIVSGQYGPQCRGPTSRTF 200 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~-----~~~~~~p~~r~~~~~~~~-~~-~Iyv~GG~~~~~~~~~~~~v~ 200 (322)
++++|+|-| +..|+||..+++-.. +...+. .+..-.++... ++ ++|.+-| +..+
T Consensus 109 ~g~~yfFkG--------~~yw~yd~~~~~v~~gyPk~i~~~~g-ip~~idaAf~~~~~~~~YfFkg----------~~y~ 169 (196)
T 3c7x_A 109 NGKTYFFRG--------NKYYRFNEELRAVDSEYPKNIKVWEG-IPESPRGSFMGSDEVFTYFYKG----------NKYW 169 (196)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEECTTCSEEGGGSBT-CCSSCSEEEECTTSSEEEEEET----------TEEE
T ss_pred CCEEEEEEC--------CEEEEEeCCcccccCCCCccHHHCCC-cCCCcceeEEecCCCEEEEEEC----------CEEE
Confidence 689999988 468999987654211 111111 01122233333 44 9999987 6789
Q ss_pred EEeCCCCc
Q 020682 201 VLDSETRK 208 (322)
Q Consensus 201 ~yd~~t~~ 208 (322)
.||..+.+
T Consensus 170 r~d~~~~~ 177 (196)
T 3c7x_A 170 KFNNQKLK 177 (196)
T ss_dssp EEETTTTE
T ss_pred EEECCcce
Confidence 99988765
No 198
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=54.02 E-value=1.7e+02 Score=28.61 Aligned_cols=106 Identities=14% Similarity=0.055 Sum_probs=61.1
Q ss_pred hhccccccCCC--CEEECCCCCCC--------CcccEEEEECCEEEEEeecCCCCCCcceeEEEECCCCc--eEECCC-C
Q 020682 97 ATFADLPAPDL--EWEQMPSAPVP--------RLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFD-M 163 (322)
Q Consensus 97 ~~~~~yd~~~~--~W~~~~~~p~~--------r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~--W~~~~~-~ 163 (322)
..+..+|..+. .|+.-...+.. ......+..+++||+.... ..++.+|.++.+ |+.-.. .
T Consensus 87 ~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d-------g~l~alD~~tG~~~W~~~~~~~ 159 (677)
T 1kb0_A 87 SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD-------GRLIALDAATGKEVWHQNTFEG 159 (677)
T ss_dssp GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT-------SEEEEEETTTCCEEEEEETTTT
T ss_pred CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC-------CEEEEEECCCCCEEeeecCCcC
Confidence 35777887665 58776543211 1123445678999987431 358999987654 876432 1
Q ss_pred CCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCCc--EEEc
Q 020682 164 PKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK--WDSI 212 (322)
Q Consensus 164 ~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~--W~~~ 212 (322)
.........+-++.++.||+..+..... .-..+..||.+|.+ |+.-
T Consensus 160 ~~~~~~~~~~p~v~~~~v~v~~~~~~~~---~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 160 QKGSLTITGAPRVFKGKVIIGNGGAEYG---VRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp CCSSCBCCSCCEEETTEEEECCBCTTTC---CBCEEEEEETTTCCEEEEEE
T ss_pred cCcCcccccCcEEECCEEEEEecccccC---CCCEEEEEECCCCcEEEEec
Confidence 1100112223455688888754422211 13789999998876 8764
No 199
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=53.80 E-value=1.3e+02 Score=27.16 Aligned_cols=94 Identities=11% Similarity=0.071 Sum_probs=48.7
Q ss_pred EEEEECCEEEEEeecCCCCCCcceeEEEECCCCce--EEC----CCCCCCCCCceeEEEE-eCCEEEEEecccCCCCCCC
Q 020682 123 AAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKW--VDR----FDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGP 195 (322)
Q Consensus 123 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W--~~~----~~~~~p~~r~~~~~~~-~~~~Iyv~GG~~~~~~~~~ 195 (322)
++..+++++|+|-|. .+|+++.....- ..+ +.+|. ...++... .++++|+|-|
T Consensus 185 Av~~~~g~~~fFkg~--------~~Wr~~~~~~~~~p~~I~~~wpgLP~---~iDAa~~~~~~g~~~fFkg--------- 244 (365)
T 3ba0_A 185 AVTTVGNKIFFFKDR--------FFWLKVSERPKTSVNLISSLWPTLPS---GIEAAYEIEARNQVFLFKD--------- 244 (365)
T ss_dssp CEEEETTEEEEEETT--------EEEECCSSCCCCCEEEHHHHCSSCCS---SCCEEEEEGGGTEEEEEET---------
T ss_pred eEEEcCCeEEEEeCC--------EEEEEcCCCccCCccchhhhccCCCC---CccEEEEecCCCEEEEEeC---------
Confidence 345579999999873 467776543221 011 12232 23323223 2789999977
Q ss_pred CceEEEEeCCCCc--E-EEcCC--CCCC-CCCcEEEEE--CCEEEEEecc
Q 020682 196 TSRTFVLDSETRK--W-DSIPP--LPSP-RYSPATQLW--RGRLHVMGGS 237 (322)
Q Consensus 196 ~~~v~~yd~~t~~--W-~~~~~--~p~~-r~~~~~~~~--~~~Lyv~GG~ 237 (322)
+.+|+|+..+.. + +.+.. +|.. ..--++..+ ++++|+|-|.
T Consensus 245 -~~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG~ 293 (365)
T 3ba0_A 245 -DKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVDN 293 (365)
T ss_dssp -TEEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEETT
T ss_pred -CEEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEECC
Confidence 566777643211 1 12222 3331 122244444 4789999773
No 200
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=53.53 E-value=1e+02 Score=26.04 Aligned_cols=168 Identities=7% Similarity=-0.040 Sum_probs=76.1
Q ss_pred hccccccCCC--CEEECCCCCCCCcccEEEE-ECCEEEEEeecCCCCCCcceeEEEECCCC-ceEECCCCCCCCCCceeE
Q 020682 98 TFADLPAPDL--EWEQMPSAPVPRLDGAAIQ-IKNLFYVFAGYGSLDYVHSHVDVYNFTDN-KWVDRFDMPKDMAHSHLG 173 (322)
Q Consensus 98 ~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~~~-~W~~~~~~~~p~~r~~~~ 173 (322)
.+..+|..+. .|+.-.+-. ...+.+.. -++++++.+. ..+..||++.+ .|+.-.+ . ....++
T Consensus 16 ~v~~~d~~tG~~~w~~~~~~~--~~~~~~~~~pdG~ilvs~~--------~~V~~~d~~G~~~W~~~~~--~--~~~~~~ 81 (276)
T 3no2_A 16 KIAIINKDTKEIVWEYPLEKG--WECNSVAATKAGEILFSYS--------KGAKMITRDGRELWNIAAP--A--GCEMQT 81 (276)
T ss_dssp EEEEEETTTTEEEEEEECCTT--CCCCEEEECTTSCEEEECB--------SEEEEECTTSCEEEEEECC--T--TCEEEE
T ss_pred EEEEEECCCCeEEEEeCCCcc--CCCcCeEECCCCCEEEeCC--------CCEEEECCCCCEEEEEcCC--C--Cccccc
Confidence 4555666444 365433211 11233333 3677777321 35889998432 3765332 1 112233
Q ss_pred EEE-eCCEEEEEecccCCCCCCCCceEEEEeCCCCc-EEEc-C-CCCC--CCCCcEEEEECCEEEEEeccCCCCCCCCcc
Q 020682 174 VVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK-WDSI-P-PLPS--PRYSPATQLWRGRLHVMGGSKENRHTPGLE 247 (322)
Q Consensus 174 ~~~-~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~-W~~~-~-~~p~--~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~ 247 (322)
+.. .++.+++..... ...++.+|+.-.. |+.- . ..+. ..........++.+++....+ ..+.
T Consensus 82 ~~~~~dG~~lv~~~~~-------~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~-----~~v~ 149 (276)
T 3no2_A 82 ARILPDGNALVAWCGH-------PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFAT-----SEVR 149 (276)
T ss_dssp EEECTTSCEEEEEEST-------TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTT-----TEEE
T ss_pred cEECCCCCEEEEecCC-------CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCC-----CEEE
Confidence 333 366666654321 1567788875432 4422 1 1111 111122334456666554321 1233
Q ss_pred eEeeeeeccccccCceEeccCCCCCcCceeEEEECCEEEEEecCCC-CCCCCCC
Q 020682 248 HWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEG-DFMAKPG 300 (322)
Q Consensus 248 ~~~~~v~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~-~~~~~p~ 300 (322)
.|+. + .+..|+.-.+. .........++.++|.+..++ ...++|.
T Consensus 150 ~~d~-----~-G~~~w~~~~~~---~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 150 EIAP-----N-GQLLNSVKLSG---TPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp EECT-----T-SCEEEEEECSS---CCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred EECC-----C-CCEEEEEECCC---CccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 3332 2 35557654321 111133344677777776554 2345665
No 201
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=53.34 E-value=19 Score=30.71 Aligned_cols=76 Identities=12% Similarity=0.149 Sum_probs=41.4
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECC--CCceEECCCCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEe
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFT--DNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLD 203 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~--~~~W~~~~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd 203 (322)
++.||+.+..+ ..+.+||.. +.+++.+...+.. ..-..++.. ++.||+.++.++ .-.++.+|
T Consensus 242 g~~l~v~~~~~------~~i~v~d~~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~------~v~v~~~d 307 (343)
T 1ri6_A 242 GRHLYACDRTA------SLITVFSVSEDGSVLSKEGFQPTE--TQPRGFNVDHSGKYLIAAGQKSH------HISVYEIV 307 (343)
T ss_dssp SSEEEEEETTT------TEEEEEEECTTSCCEEEEEEEECS--SSCCCEEECTTSSEEEEECTTTC------EEEEEEEE
T ss_pred CCEEEEEecCC------CEEEEEEEcCCCCceEEeeeecCC--CccceEEECCCCCEEEEecCCCC------eEEEEEEc
Confidence 34677665321 357888877 4556555433321 112233443 456777654221 23455568
Q ss_pred CCCCcEEEcCCCCC
Q 020682 204 SETRKWDSIPPLPS 217 (322)
Q Consensus 204 ~~t~~W~~~~~~p~ 217 (322)
+++.+++.+..++.
T Consensus 308 ~~~g~~~~~~~~~~ 321 (343)
T 1ri6_A 308 GEQGLLHEKGRYAV 321 (343)
T ss_dssp TTTTEEEEEEEEEC
T ss_pred CCCceeeEcccccc
Confidence 88988888765544
No 202
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=53.24 E-value=39 Score=29.32 Aligned_cols=100 Identities=9% Similarity=-0.001 Sum_probs=46.8
Q ss_pred EEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEECC-EEEEEeccCCCCCCCCcceEeeeeeccccc
Q 020682 181 IYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRG-RLHVMGGSKENRHTPGLEHWSIAVKDGKAL 259 (322)
Q Consensus 181 Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~-~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~ 259 (322)
.+.+|.+...... .-.++.+|+++.+.+.+.......-...+..-++ .||+.+.... ....+..|+++ +.
T Consensus 15 ~~~vg~y~~~~~~--~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~--~~~~v~~~~~~-----~~ 85 (361)
T 3scy_A 15 TMLVGTYTSGNSK--GIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSK--DQAAVSAFAFD-----KE 85 (361)
T ss_dssp EEEEEECCSSSCC--EEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSS--TTCEEEEEEEE-----TT
T ss_pred EEEEEeccCCCCC--CEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCC--CCCcEEEEEEe-----CC
Confidence 3445665443221 2455667888888887754311111222222344 4766654311 12335555543 44
Q ss_pred cCceEeccCCCCCcCce-eEEEECCE-EEEEec
Q 020682 260 EKAWRTEIPIPRGGPHR-ACFVFNDR-LFVVGG 290 (322)
Q Consensus 260 ~~~W~~~~~~p~~~~~~-~~~~~~~~-lyv~GG 290 (322)
+...+.+...+...... .++. +++ ||+.+.
T Consensus 86 ~g~~~~~~~~~~~~~~p~~~~~-dg~~l~~~~~ 117 (361)
T 3scy_A 86 KGTLHLLNTQKTMGADPCYLTT-NGKNIVTANY 117 (361)
T ss_dssp TTEEEEEEEEECSSSCEEEEEE-CSSEEEEEET
T ss_pred CCcEEEeeEeccCCCCcEEEEE-CCCEEEEEEC
Confidence 56666665444322222 2233 554 555543
No 203
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=53.24 E-value=26 Score=33.09 Aligned_cols=72 Identities=8% Similarity=0.041 Sum_probs=39.7
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~ 207 (322)
++.+++..+.. +.+.+||.++.+-..+...+ . ....... +++..++++.+... ...++.+|+.+.
T Consensus 121 g~~~~~~s~~~------~~~~l~d~~~g~~~~l~~~~---~-~~~~~sp-DG~~la~~~~~~~~----~~~i~~~d~~~g 185 (582)
T 3o4h_A 121 GEAVVFTGATE------DRVALYALDGGGLRELARLP---G-FGFVSDI-RGDLIAGLGFFGGG----RVSLFTSNLSSG 185 (582)
T ss_dssp SSCEEEEEECS------SCEEEEEEETTEEEEEEEES---S-CEEEEEE-ETTEEEEEEEEETT----EEEEEEEETTTC
T ss_pred CCeEEEEecCC------CCceEEEccCCcEEEeecCC---C-ceEEECC-CCCEEEEEEEcCCC----CeEEEEEcCCCC
Confidence 55555555432 12447788877766654332 1 2222222 44444444443322 256999999999
Q ss_pred cEEEcCC
Q 020682 208 KWDSIPP 214 (322)
Q Consensus 208 ~W~~~~~ 214 (322)
+++.+..
T Consensus 186 ~~~~l~~ 192 (582)
T 3o4h_A 186 GLRVFDS 192 (582)
T ss_dssp CCEEECC
T ss_pred CceEeec
Confidence 9887753
No 204
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=53.22 E-value=1.1e+02 Score=26.26 Aligned_cols=93 Identities=14% Similarity=0.032 Sum_probs=46.5
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEEE-CCEEEEEeecCCCCCCcceeEEEECCCCceE--ECCCCCCCCCCceeEE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWV--DRFDMPKDMAHSHLGV 174 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~--~~~~~~~p~~r~~~~~ 174 (322)
.+..||..+.+-...........-.+++.. ++.+++.|+.+ ..+.+||..+.+-. .+.. .+ ...-.++
T Consensus 150 ~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d------g~i~iwd~~~~~~~~~~~~~-~h--~~~v~~l 220 (343)
T 3lrv_A 150 TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD------GILDVYNLSSPDQASSRFPV-DE--EAKIKEV 220 (343)
T ss_dssp CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT------SCEEEEESSCTTSCCEECCC-CT--TSCEEEE
T ss_pred cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC------CEEEEEECCCCCCCccEEec-cC--CCCEEEE
Confidence 456667665554332221211112222222 56777777744 25888999876543 2221 11 1122233
Q ss_pred EEe-CCEEEEEecccCCCCCCCCceEEEEeCCCCc
Q 020682 175 VSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRK 208 (322)
Q Consensus 175 ~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 208 (322)
+.. ++..++.|+. +.+..||+.+.+
T Consensus 221 ~fs~~g~~l~s~~~---------~~v~iwd~~~~~ 246 (343)
T 3lrv_A 221 KFADNGYWMVVECD---------QTVVCFDLRKDV 246 (343)
T ss_dssp EECTTSSEEEEEES---------SBEEEEETTSST
T ss_pred EEeCCCCEEEEEeC---------CeEEEEEcCCCC
Confidence 333 4555555552 367889987754
No 205
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=52.92 E-value=70 Score=26.78 Aligned_cols=66 Identities=12% Similarity=0.107 Sum_probs=42.2
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
++.||+.+..+ ..+++||+.+. .+.... + ...-.++++. ++.+|+.... ...+..||+++
T Consensus 39 g~~l~~~~~~~------~~i~~~~~~~~-~~~~~~-~---~~~~~~l~~~~dg~l~v~~~~--------~~~i~~~d~~~ 99 (296)
T 3e5z_A 39 RSAVIFSDVRQ------NRTWAWSDDGQ-LSPEMH-P---SHHQNGHCLNKQGHLIACSHG--------LRRLERQREPG 99 (296)
T ss_dssp GTEEEEEEGGG------TEEEEEETTSC-EEEEES-S---CSSEEEEEECTTCCEEEEETT--------TTEEEEECSTT
T ss_pred CCEEEEEeCCC------CEEEEEECCCC-eEEEEC-C---CCCcceeeECCCCcEEEEecC--------CCeEEEEcCCC
Confidence 44588887532 36899999987 554432 1 1223455554 6778876531 26789999988
Q ss_pred CcEEEc
Q 020682 207 RKWDSI 212 (322)
Q Consensus 207 ~~W~~~ 212 (322)
++.+.+
T Consensus 100 g~~~~~ 105 (296)
T 3e5z_A 100 GEWESI 105 (296)
T ss_dssp CCEEEE
T ss_pred CcEEEE
Confidence 887766
No 206
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=52.73 E-value=36 Score=28.99 Aligned_cols=66 Identities=8% Similarity=-0.086 Sum_probs=41.0
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
++.||+..-.. ..+++||+.+.+-.... .+. + -.+++.. ++.+|+.. ...+..||+++
T Consensus 24 ~~~l~~~d~~~------~~i~~~d~~~~~~~~~~-~~~---~-~~~i~~~~dG~l~v~~----------~~~l~~~d~~~ 82 (297)
T 3g4e_A 24 SNSLLFVDIPA------KKVCRWDSFTKQVQRVT-MDA---P-VSSVALRQSGGYVATI----------GTKFCALNWKE 82 (297)
T ss_dssp TTEEEEEETTT------TEEEEEETTTCCEEEEE-CSS---C-EEEEEEBTTSSEEEEE----------TTEEEEEETTT
T ss_pred CCEEEEEECCC------CEEEEEECCCCcEEEEe-CCC---c-eEEEEECCCCCEEEEE----------CCeEEEEECCC
Confidence 46888875421 46899999887654332 221 1 2234443 56676643 15788999999
Q ss_pred CcEEEcCC
Q 020682 207 RKWDSIPP 214 (322)
Q Consensus 207 ~~W~~~~~ 214 (322)
.+.+.+..
T Consensus 83 g~~~~~~~ 90 (297)
T 3g4e_A 83 QSAVVLAT 90 (297)
T ss_dssp TEEEEEEE
T ss_pred CcEEEEEe
Confidence 88877643
No 207
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=51.97 E-value=1.7e+02 Score=28.28 Aligned_cols=130 Identities=13% Similarity=0.082 Sum_probs=61.8
Q ss_pred ceeEEEECCCCce--EECCCCCC-CCCCceeEEEEe-CC-EEEEEecccCCCCCCCCceEEEEeCCCC--cEEEcCCCCC
Q 020682 145 SHVDVYNFTDNKW--VDRFDMPK-DMAHSHLGVVSD-GR-YIYIVSGQYGPQCRGPTSRTFVLDSETR--KWDSIPPLPS 217 (322)
Q Consensus 145 ~~v~~yd~~~~~W--~~~~~~~~-p~~r~~~~~~~~-~~-~Iyv~GG~~~~~~~~~~~~v~~yd~~t~--~W~~~~~~p~ 217 (322)
..+++++..+..= ..+...+. . +....++... ++ .|++.... +.. .++++.+|..+. .|..+..-..
T Consensus 208 ~~v~~~~lgt~~~~~~~v~~~~~~~-~~~~~~~~~SpDg~~l~~~~~~-~~~----~~~i~~~d~~~~~~~~~~l~~~~~ 281 (693)
T 3iuj_A 208 HKVYFHRLGTAQEDDRLVFGAIPAQ-HHRYVGATVTEDDRFLLISAAN-STS----GNRLYVKDLSQENAPLLTVQGDLD 281 (693)
T ss_dssp CEEEEEETTSCGGGCEEEESCSGGG-CCSEEEEEECTTSCEEEEEEES-SSS----CCEEEEEETTSTTCCCEEEECSSS
T ss_pred cEEEEEECCCCcccceEEEecCCCC-CeEEEEEEEcCCCCEEEEEEcc-CCC----CcEEEEEECCCCCCceEEEeCCCC
Confidence 4688888876542 12222211 0 1122233332 44 44443332 111 268999998766 6777754222
Q ss_pred CCCCcEEEEECCEEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccCCCCCcCceeEEEECCEEEEEe
Q 020682 218 PRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVG 289 (322)
Q Consensus 218 ~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~lyv~G 289 (322)
... ......+++||+....+.. ...+..++++ .+....|+.+.+-..... .....++.|++..
T Consensus 282 ~~~-~~~~~~g~~l~~~t~~~~~--~~~l~~~d~~----~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~ 344 (693)
T 3iuj_A 282 ADV-SLVDNKGSTLYLLTNRDAP--NRRLVTVDAA----NPGPAHWRDLIPERQQVL--TVHSGSGYLFAEY 344 (693)
T ss_dssp SCE-EEEEEETTEEEEEECTTCT--TCEEEEEETT----SCCGGGCEEEECCCSSCE--EEEEETTEEEEEE
T ss_pred ceE-EEEeccCCEEEEEECCCCC--CCEEEEEeCC----CCCccccEEEecCCCCEE--EEEEECCEEEEEE
Confidence 221 1234567889988654321 2233344432 122345877654332222 4444555555443
No 208
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=51.80 E-value=85 Score=30.12 Aligned_cols=52 Identities=23% Similarity=0.436 Sum_probs=33.8
Q ss_pred EEEeCCEEEEEecccCCCCCCCCceEEEEeCCCCc--EEEcCCCCCC---CC---CcEEEEECCEEEEE
Q 020682 174 VVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK--WDSIPPLPSP---RY---SPATQLWRGRLHVM 234 (322)
Q Consensus 174 ~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~~---r~---~~~~~~~~~~Lyv~ 234 (322)
-++.++.||+.... ..++.+|.+|.+ |+.-...+.. .+ ..+.++.+++||+.
T Consensus 64 P~v~~g~vyv~~~~---------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~ 123 (582)
T 1flg_A 64 AIVSDGVIYVTASY---------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFG 123 (582)
T ss_dssp CEEETTEEEEEETT---------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEE
T ss_pred cEEECCEEEEEcCC---------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEE
Confidence 35679999997652 348999988765 8875433221 11 13345688998875
No 209
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=51.77 E-value=65 Score=27.37 Aligned_cols=164 Identities=8% Similarity=0.033 Sum_probs=72.9
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCC-CCCceeEEEEe-CCEEEEE----eccc---CC--CCCCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKD-MAHSHLGVVSD-GRYIYIV----SGQY---GP--QCRGPT 196 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p-~~r~~~~~~~~-~~~Iyv~----GG~~---~~--~~~~~~ 196 (322)
+++||+.... ...+.+||+. .+.+.+...... ....-..+++. ++.||+. |-.. +. ......
T Consensus 96 dG~l~v~~~~------~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~ 168 (305)
T 3dr2_A 96 QQRLVHCEHG------RRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAH 168 (305)
T ss_dssp TSCEEEEETT------TTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSC
T ss_pred CCCEEEEECC------CCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCC
Confidence 5677776321 1258888876 445443321110 00111234443 6789985 3211 10 001113
Q ss_pred ceEEEEeCCCCcEEEcCCCCCCCCCcEEEEE-CC-EEEEEeccCCCCCCCCcceEeeeeeccccccCceE---eccCCCC
Q 020682 197 SRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RG-RLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWR---TEIPIPR 271 (322)
Q Consensus 197 ~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~~-~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~---~~~~~p~ 271 (322)
..+++||+++.+.+.+.. ... -..++.. ++ .||+............+..|+++ .+... .....+.
T Consensus 169 ~~v~~~d~~~g~~~~~~~--~~~-p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~-------~~~l~~~~~~~~~~~ 238 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMAD--LDH-PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWR-------DGALHDRRHFASVPD 238 (305)
T ss_dssp EEEEEECSSSCCCEEEEE--ESS-EEEEEECTTSSEEEEEECCC---CCCEEEEEEEE-------TTEEEEEEEEECCSS
T ss_pred CeEEEEcCCCCcEEEEec--CCC-CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEec-------CCCccCCeEEEECCC
Confidence 679999998888776641 111 1123322 34 47776432111112345556543 22111 1111111
Q ss_pred CcCceeEEEECCEEEEEecCCCCCCCCCCCCeeeeeEe
Q 020682 272 GGPHRACFVFNDRLFVVGGQEGDFMAKPGSPIFKCSRR 309 (322)
Q Consensus 272 ~~~~~~~~~~~~~lyv~GG~~~~~~~~p~~~~~~~~~~ 309 (322)
.....-.+--++.||+.. .++..+|+|..........
T Consensus 239 ~~pdgi~~d~~G~lwv~~-~~gv~~~~~~g~~~~~~~~ 275 (305)
T 3dr2_A 239 GLPDGFCVDRGGWLWSSS-GTGVCVFDSDGQLLGHIPT 275 (305)
T ss_dssp SCCCSEEECTTSCEEECC-SSEEEEECTTSCEEEEEEC
T ss_pred CCCCeEEECCCCCEEEec-CCcEEEECCCCCEEEEEEC
Confidence 111111222356677765 4556667776555444433
No 210
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=51.74 E-value=77 Score=28.26 Aligned_cols=85 Identities=11% Similarity=0.301 Sum_probs=46.0
Q ss_pred ceEEEEeCCCCcEEEcCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccCCCCCcC
Q 020682 197 SRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGP 274 (322)
Q Consensus 197 ~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~~~ 274 (322)
+.|..+|..+++-..+-.+......-..+.+ ++++++.|+.++ .+..|+++ +.+- +..+.....
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg-----~v~iWd~~-------~~~~--~~~~~~h~~ 190 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA-----EVQLWDVQ-------QQKR--LRNMTSHSA 190 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS-----CEEEEETT-------TTEE--EEEECCCSS
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC-----eEEEEEcC-------CCcE--EEEEeCCCC
Confidence 5788888888877665443332222222333 567788888654 36777753 3322 211111112
Q ss_pred ceeEEEECCEEEEEecCCCCC
Q 020682 275 HRACFVFNDRLFVVGGQEGDF 295 (322)
Q Consensus 275 ~~~~~~~~~~lyv~GG~~~~~ 295 (322)
...++..++.+++.|+.++..
T Consensus 191 ~v~~~s~~~~~l~sgs~d~~i 211 (420)
T 4gga_A 191 RVGSLSWNSYILSSGSRSGHI 211 (420)
T ss_dssp CEEEEEEETTEEEEEETTSEE
T ss_pred ceEEEeeCCCEEEEEeCCCce
Confidence 224455677777777766543
No 211
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=50.32 E-value=58 Score=27.21 Aligned_cols=60 Identities=13% Similarity=0.233 Sum_probs=38.5
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEEC----C-CCCC----CCCCceeEEEE--eCCEEEEEecccCCCCCCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDR----F-DMPK----DMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPT 196 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~----~-~~~~----p~~r~~~~~~~--~~~~Iyv~GG~~~~~~~~~~ 196 (322)
++++|+|-| +..|+||..+++-..- . ..|. +.+..--++.. .++++|+|-|
T Consensus 127 ~gk~yfFkG--------~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG---------- 188 (225)
T 3oyo_A 127 GKEVYLFKG--------NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG---------- 188 (225)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET----------
T ss_pred CCcEEEEeC--------CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC----------
Confidence 689999988 4689999776654431 1 1111 00112223334 3789999987
Q ss_pred ceEEEEeCC
Q 020682 197 SRTFVLDSE 205 (322)
Q Consensus 197 ~~v~~yd~~ 205 (322)
+..++||..
T Consensus 189 ~~ywr~d~~ 197 (225)
T 3oyo_A 189 QNYVRIDFT 197 (225)
T ss_dssp TEEEEEECC
T ss_pred CEEEEEeCC
Confidence 678999987
No 212
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=49.70 E-value=64 Score=28.98 Aligned_cols=101 Identities=6% Similarity=0.108 Sum_probs=48.0
Q ss_pred EEEEeecCCCCCCcceeEEEECCCC---ceEE--CCCCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEe
Q 020682 131 FYVFAGYGSLDYVHSHVDVYNFTDN---KWVD--RFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLD 203 (322)
Q Consensus 131 lyv~GG~~~~~~~~~~v~~yd~~~~---~W~~--~~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd 203 (322)
+++.|+.+ ..+.+||+.+. .+.. ....... ...-.+++.. ++.+++.|+. -..+..||
T Consensus 196 ~l~s~~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~l~s~~~--------dg~i~i~d 260 (430)
T 2xyi_A 196 YLLSASDD------HTICLWDINATPKEHRVIDAKNIFTGH-TAVVEDVAWHLLHESLFGSVAD--------DQKLMIWD 260 (430)
T ss_dssp EEEEECTT------SCEEEEETTSCCBGGGEEECSEEECCC-SSCEEEEEECSSCTTEEEEEET--------TSEEEEEE
T ss_pred eEEEEeCC------CeEEEEeCCCCCCCCceeccceeecCC-CCCEeeeEEeCCCCCEEEEEeC--------CCeEEEEE
Confidence 66666643 24788888762 2211 1111111 1223344443 5567777664 26788899
Q ss_pred CCCCc-EEEcCCCCCCCCCcEEEEEC--C-EEEEEeccCCCCCCCCcceEee
Q 020682 204 SETRK-WDSIPPLPSPRYSPATQLWR--G-RLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 204 ~~t~~-W~~~~~~p~~r~~~~~~~~~--~-~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
+.+.. ...+..+.........+.+. + .+++.|+.++ .+..|++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg-----~v~vwd~ 307 (430)
T 2xyi_A 261 TRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK-----TVALWDL 307 (430)
T ss_dssp TTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS-----EEEEEET
T ss_pred CCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCC-----eEEEEeC
Confidence 88652 11111111111122233332 3 4788888654 3566664
No 213
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=49.39 E-value=71 Score=30.01 Aligned_cols=97 Identities=8% Similarity=-0.061 Sum_probs=49.7
Q ss_pred ccccCCCCEEECCCCCCCCcccEEEEECCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CC
Q 020682 101 DLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GR 179 (322)
Q Consensus 101 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~ 179 (322)
.||..+.+-+.+...+. .... ..-+++..++++.+.... .+++++|+.+.+.+.+..... .....+.. ++
T Consensus 136 l~d~~~g~~~~l~~~~~--~~~~-~spDG~~la~~~~~~~~~--~~i~~~d~~~g~~~~l~~~~~----~~~~~~~SpDG 206 (582)
T 3o4h_A 136 LYALDGGGLRELARLPG--FGFV-SDIRGDLIAGLGFFGGGR--VSLFTSNLSSGGLRVFDSGEG----SFSSASISPGM 206 (582)
T ss_dssp EEEEETTEEEEEEEESS--CEEE-EEEETTEEEEEEEEETTE--EEEEEEETTTCCCEEECCSSC----EEEEEEECTTS
T ss_pred EEEccCCcEEEeecCCC--ceEE-ECCCCCEEEEEEEcCCCC--eEEEEEcCCCCCceEeecCCC----ccccceECCCC
Confidence 44555554444433222 2222 223444444444332221 359999999988887644332 12233333 44
Q ss_pred EEEEEecccCCCCCCCCceEEEEeCCCCcEEEc
Q 020682 180 YIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSI 212 (322)
Q Consensus 180 ~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~ 212 (322)
+.++.+..++ ...++.+|.++++...+
T Consensus 207 ~~l~~~~~~~------~~~i~~~d~~~~~~~~~ 233 (582)
T 3o4h_A 207 KVTAGLETAR------EARLVTVDPRDGSVEDL 233 (582)
T ss_dssp CEEEEEECSS------CEEEEEECTTTCCEEEC
T ss_pred CEEEEccCCC------eeEEEEEcCCCCcEEEc
Confidence 4333333211 25899999999988733
No 214
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=48.87 E-value=81 Score=28.45 Aligned_cols=65 Identities=15% Similarity=0.168 Sum_probs=41.0
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCC------CCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEE
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFD------MPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTF 200 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~------~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~ 200 (322)
++++|+|-| +..|+||..+++-..--+ .+.-+.... ++... ++++|.|-| +..+
T Consensus 284 ~~~~yfFkG--------~~yw~yd~~~~~v~~gyPk~I~~~f~g~p~~iD-aA~~~~~g~~YfFkg----------~~yw 344 (365)
T 3ba0_A 284 FYRTYFFVD--------NQYWRYDERRQMMDPGYPKLITKNFQGIGPKID-AVFYSKNKYYYFFQG----------SNQF 344 (365)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEECSSCCCCHHHHSTTCCSSCS-EEEEETTTEEEEEET----------TEEE
T ss_pred CCEEEEEEC--------CEEEEEeCCcceecCCCCcchhhcCCCCCCccc-eeeEecCCcEEEEeC----------CEEE
Confidence 479999988 469999987654221000 111002233 33334 889999977 6789
Q ss_pred EEeCCCCcEEE
Q 020682 201 VLDSETRKWDS 211 (322)
Q Consensus 201 ~yd~~t~~W~~ 211 (322)
+||..+.+-.+
T Consensus 345 r~d~~~~~v~~ 355 (365)
T 3ba0_A 345 EYDFLLQRITK 355 (365)
T ss_dssp EEETTTTEEEE
T ss_pred EEECCccEEec
Confidence 99998876554
No 215
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=48.82 E-value=1.1e+02 Score=29.64 Aligned_cols=77 Identities=13% Similarity=0.179 Sum_probs=48.5
Q ss_pred EEEECCEEEEEeecCCCCCCcceeEEEECCCC---ceEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEE
Q 020682 124 AIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDN---KWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTF 200 (322)
Q Consensus 124 ~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~---~W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~ 200 (322)
....++.+|+....+.. ...++..|+.+. .|+.+.+-.. ..- .....++.|++..-.++ ...++
T Consensus 287 ~~~~g~~l~~~t~~~~~---~~~l~~~d~~~~~~~~~~~l~~~~~---~~~-~~s~~g~~lv~~~~~~g------~~~l~ 353 (693)
T 3iuj_A 287 VDNKGSTLYLLTNRDAP---NRRLVTVDAANPGPAHWRDLIPERQ---QVL-TVHSGSGYLFAEYMVDA------TARVE 353 (693)
T ss_dssp EEEETTEEEEEECTTCT---TCEEEEEETTSCCGGGCEEEECCCS---SCE-EEEEETTEEEEEEEETT------EEEEE
T ss_pred EeccCCEEEEEECCCCC---CCEEEEEeCCCCCccccEEEecCCC---CEE-EEEEECCEEEEEEEECC------eeEEE
Confidence 34568899998765432 236899998763 4877544332 222 55666787776554322 36789
Q ss_pred EEeCCCCcEEEcC
Q 020682 201 VLDSETRKWDSIP 213 (322)
Q Consensus 201 ~yd~~t~~W~~~~ 213 (322)
.+|......+.+.
T Consensus 354 ~~d~~g~~~~~l~ 366 (693)
T 3iuj_A 354 QFDYEGKRVREVA 366 (693)
T ss_dssp EECTTSCEEEEEC
T ss_pred EEECCCCeeEEee
Confidence 9998876655553
No 216
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=48.34 E-value=1.4e+02 Score=26.27 Aligned_cols=68 Identities=9% Similarity=0.024 Sum_probs=38.6
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCC-CCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMP-KDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~-~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
++.+++.|+.+ ..+.+||..+.+-...-..+ . ...-.+++.. ++.+++.|+.+ ..+..||..
T Consensus 181 ~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~~~d--------g~i~iwd~~ 244 (437)
T 3gre_A 181 EKSLLVALTNL------SRVIIFDIRTLERLQIIENSPR--HGAVSSICIDEECCVLILGTTR--------GIIDIWDIR 244 (437)
T ss_dssp SCEEEEEEETT------SEEEEEETTTCCEEEEEECCGG--GCCEEEEEECTTSCEEEEEETT--------SCEEEEETT
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCeeeEEEccCCC--CCceEEEEECCCCCEEEEEcCC--------CeEEEEEcC
Confidence 36677777753 35888999876543321111 1 1122233333 56667777653 467889998
Q ss_pred CCcEEE
Q 020682 206 TRKWDS 211 (322)
Q Consensus 206 t~~W~~ 211 (322)
+.+...
T Consensus 245 ~~~~~~ 250 (437)
T 3gre_A 245 FNVLIR 250 (437)
T ss_dssp TTEEEE
T ss_pred CccEEE
Confidence 766443
No 217
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=48.20 E-value=1.2e+02 Score=28.72 Aligned_cols=93 Identities=15% Similarity=0.125 Sum_probs=46.1
Q ss_pred ceeEEEECCCCceEECCCCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEc---CCCCCCC
Q 020682 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSI---PPLPSPR 219 (322)
Q Consensus 145 ~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~---~~~p~~r 219 (322)
..++++|..+.+-..+..++. .+.-+.++.. ++++|+.+.. .+.+.++|+++++-... ...|.+.
T Consensus 302 g~i~vvd~~~~~~l~~~~i~~--~~~~~~~~~spdg~~l~va~~~--------~~~v~v~D~~tg~l~~~i~~g~~ph~g 371 (543)
T 1nir_A 302 GKVLLVNYKDIDNLTVTSIGA--APFLHDGGWDSSHRYFMTAANN--------SNKVAVIDSKDRRLSALVDVGKTPHPG 371 (543)
T ss_dssp TEEEEEECTTSSSCEEEEEEC--CSSCCCEEECTTSCEEEEEEGG--------GTEEEEEETTTTEEEEEEECSSSBCCT
T ss_pred CeEEEEEecCCCcceeEEecc--CcCccCceECCCCCEEEEEecC--------CCeEEEEECCCCeEEEeeccCCCCCCC
Confidence 368888887643211111122 2222334443 4456665432 36788899999875443 2333332
Q ss_pred CCcEEEEE-CCEEEEEeccCCCCCCCCcceEee
Q 020682 220 YSPATQLW-RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 220 ~~~~~~~~-~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
.+.....- ++.+|+.+... ..++..|+.
T Consensus 372 ~g~~~~~p~~g~~~~s~~~~----d~~V~v~d~ 400 (543)
T 1nir_A 372 RGANFVHPKYGPVWSTSHLG----DGSISLIGT 400 (543)
T ss_dssp TCEEEEETTTEEEEEEEBSS----SSEEEEEEC
T ss_pred CCcccCCCCCccEEEeccCC----CceEEEEEe
Confidence 22222221 36788876432 223555554
No 218
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=47.85 E-value=1.3e+02 Score=25.68 Aligned_cols=56 Identities=5% Similarity=0.024 Sum_probs=28.2
Q ss_pred CCEEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccCCCCC-cCceeEEEECCEEEEEecCCCCC
Q 020682 228 RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRG-GPHRACFVFNDRLFVVGGQEGDF 295 (322)
Q Consensus 228 ~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~-~~~~~~~~~~~~lyv~GG~~~~~ 295 (322)
++++++.|+.++ .+..|+++ +..-......... ........-++.+++.|+.++..
T Consensus 138 ~~~~l~s~s~dg-----~i~~wd~~-------~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i 194 (343)
T 3lrv_A 138 NTEYFIWADNRG-----TIGFQSYE-------DDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGIL 194 (343)
T ss_dssp -CCEEEEEETTC-----CEEEEESS-------SSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCE
T ss_pred CCCEEEEEeCCC-----cEEEEECC-------CCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEE
Confidence 456777777654 36677754 3333222211111 12112233367788888877653
No 219
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=47.60 E-value=1.3e+02 Score=25.72 Aligned_cols=100 Identities=6% Similarity=-0.010 Sum_probs=51.8
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEE-EECCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCC-CceeEEE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAI-QIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMA-HSHLGVV 175 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~-r~~~~~~ 175 (322)
.+..||+.+.+..... ++ ..-.+++ .-++++|+... ..+++||+.+.+.+.+...+...+ ..-..++
T Consensus 72 ~i~~~d~~~~~~~~~~-~~--~~v~~i~~~~dg~l~v~~~--------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~ 140 (326)
T 2ghs_A 72 ELHELHLASGRKTVHA-LP--FMGSALAKISDSKQLIASD--------DGLFLRDTATGVLTLHAELESDLPGNRSNDGR 140 (326)
T ss_dssp EEEEEETTTTEEEEEE-CS--SCEEEEEEEETTEEEEEET--------TEEEEEETTTCCEEEEECSSTTCTTEEEEEEE
T ss_pred EEEEEECCCCcEEEEE-CC--CcceEEEEeCCCeEEEEEC--------CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEE
Confidence 5677777666544332 12 1112222 34678877642 248999999888776544322101 1122333
Q ss_pred Ee-CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEc
Q 020682 176 SD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSI 212 (322)
Q Consensus 176 ~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~ 212 (322)
+. ++.+|+....... ......++.|| +.+...+
T Consensus 141 ~d~~G~l~v~~~~~~~--~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 141 MHPSGALWIGTMGRKA--ETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp ECTTSCEEEEEEETTC--CTTCEEEEEEE--TTEEEEE
T ss_pred ECCCCCEEEEeCCCcC--CCCceEEEEEe--CCcEEEe
Confidence 33 5678774321111 11146889998 4565544
No 220
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=46.61 E-value=1.3e+02 Score=28.46 Aligned_cols=62 Identities=19% Similarity=0.224 Sum_probs=38.4
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeC-
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDS- 204 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~- 204 (322)
++++|+.+..+ ..+.++|..+.+-...-.... .-|.+++. ++.+|+.+. -..+..||+
T Consensus 148 ~~~~~vs~~~d------~~V~v~D~~t~~~~~~i~~g~----~~~~v~~spdg~~l~v~~~---------d~~V~v~D~~ 208 (543)
T 1nir_A 148 PNLFSVTLRDA------GQIALVDGDSKKIVKVIDTGY----AVHISRMSASGRYLLVIGR---------DARIDMIDLW 208 (543)
T ss_dssp GGEEEEEEGGG------TEEEEEETTTCCEEEEEECST----TEEEEEECTTSCEEEEEET---------TSEEEEEETT
T ss_pred CCEEEEEEcCC------CeEEEEECCCceEEEEEecCc----ccceEEECCCCCEEEEECC---------CCeEEEEECc
Confidence 67888887642 358889998876543222221 24455554 567777653 167889999
Q ss_pred -CCCc
Q 020682 205 -ETRK 208 (322)
Q Consensus 205 -~t~~ 208 (322)
.+.+
T Consensus 209 ~~t~~ 213 (543)
T 1nir_A 209 AKEPT 213 (543)
T ss_dssp SSSCE
T ss_pred CCCCc
Confidence 6654
No 221
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=46.24 E-value=1.3e+02 Score=28.97 Aligned_cols=88 Identities=9% Similarity=-0.057 Sum_probs=44.3
Q ss_pred eeEEEECCC-CceEECCCC-CCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCC----C
Q 020682 146 HVDVYNFTD-NKWVDRFDM-PKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSP----R 219 (322)
Q Consensus 146 ~v~~yd~~~-~~W~~~~~~-~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~----r 219 (322)
.++++|+.+ .+-..+... .....-...+. ..+..|++...... .. ..+++.+|+.+.+...+-..... .
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~-~~---~~~i~~~d~~~g~~~~~~~~~~~~~~~~ 338 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRD-QK---KLDLVEVTLASNQQRVLAHETSPTWVPL 338 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETT-SS---EEEEEEEETTTCCEEEEEEEECSSCCCC
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEeccc-CC---eEEEEEEECCCCceEEEEEcCCCCcCCc
Confidence 688889887 665444322 11001112223 34555655543222 21 37899999999887766321111 1
Q ss_pred CCcEEEEECCEEEEEeccC
Q 020682 220 YSPATQLWRGRLHVMGGSK 238 (322)
Q Consensus 220 ~~~~~~~~~~~Lyv~GG~~ 238 (322)
.......-++++++.++.+
T Consensus 339 ~~~~~~spdg~~~~~~~~~ 357 (741)
T 2ecf_A 339 HNSLRFLDDGSILWSSERT 357 (741)
T ss_dssp CSCCEECTTSCEEEEECTT
T ss_pred CCceEECCCCeEEEEecCC
Confidence 1122233366766666543
No 222
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=46.23 E-value=63 Score=31.30 Aligned_cols=17 Identities=6% Similarity=0.081 Sum_probs=13.2
Q ss_pred eeEEEECCCCceEECCC
Q 020682 146 HVDVYNFTDNKWVDRFD 162 (322)
Q Consensus 146 ~v~~yd~~~~~W~~~~~ 162 (322)
+++++|..+.+...+..
T Consensus 173 ~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 173 NLWVIDLASGRQMQLTA 189 (741)
T ss_dssp EEEEEETTTTEEEECCC
T ss_pred cEEEEecCCCCEEEecc
Confidence 69999999887766544
No 223
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=45.98 E-value=1.3e+02 Score=24.92 Aligned_cols=85 Identities=8% Similarity=-0.081 Sum_probs=39.6
Q ss_pred ceEEEEeCCCCcEEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccCCC--CCcC
Q 020682 197 SRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIP--RGGP 274 (322)
Q Consensus 197 ~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p--~~~~ 274 (322)
..+..+|..+..-..................++.+++.+|.. ...+..|++. +. +.+..+. ....
T Consensus 221 ~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~----d~~i~iwd~~-------~~--~~~~~l~gH~~~V 287 (318)
T 4ggc_A 221 RHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFA----QNQLVIWKYP-------TM--AKVAELKGHTSRV 287 (318)
T ss_dssp CEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTT----TCCEEEEETT-------TC--CEEEEECCCSSCE
T ss_pred CEEEEEecccccccccccceeeeeeeeecccccceEEEEEcC----CCEEEEEECC-------CC--cEEEEEcCCCCCE
Confidence 567778887766544432222211111122244566555542 2346667642 22 2222222 1111
Q ss_pred ceeEE-EECCEEEEEecCCCCC
Q 020682 275 HRACF-VFNDRLFVVGGQEGDF 295 (322)
Q Consensus 275 ~~~~~-~~~~~lyv~GG~~~~~ 295 (322)
. +++ .-++++++.||.++..
T Consensus 288 ~-~l~~spdg~~l~S~s~D~~v 308 (318)
T 4ggc_A 288 L-SLTMSPDGATVASAAADETL 308 (318)
T ss_dssp E-EEEECTTSSCEEEEETTTEE
T ss_pred E-EEEEcCCCCEEEEEecCCeE
Confidence 1 222 2367788888887653
No 224
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=45.81 E-value=1.3e+02 Score=25.02 Aligned_cols=99 Identities=7% Similarity=-0.014 Sum_probs=49.0
Q ss_pred hccccccCCCCEEECCCCCC----CCcccEEEEECCEEEEE----eecC------C-CCCCcceeEEEECCCCceEECCC
Q 020682 98 TFADLPAPDLEWEQMPSAPV----PRLDGAAIQIKNLFYVF----AGYG------S-LDYVHSHVDVYNFTDNKWVDRFD 162 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~----~r~~~~~~~~~~~lyv~----GG~~------~-~~~~~~~v~~yd~~~~~W~~~~~ 162 (322)
.+..||+.+.+.+.+..... .+....+..-++++|+. |... . ...-...+++||+. .+...+..
T Consensus 91 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~ 169 (296)
T 3e5z_A 91 RLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIR 169 (296)
T ss_dssp EEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEEC
T ss_pred eEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeec
Confidence 46778887777665532211 11122222236788886 4321 0 11112368999987 44443322
Q ss_pred CCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCC-CCcE
Q 020682 163 MPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSE-TRKW 209 (322)
Q Consensus 163 ~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~-t~~W 209 (322)
.. ....+++.. ++++++.... ...+++||+. +.+.
T Consensus 170 ~~----~~~~gi~~s~dg~~lv~~~~--------~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 170 DR----VKPNGLAFLPSGNLLVSDTG--------DNATHRYCLNARGET 206 (296)
T ss_dssp CC----SSEEEEEECTTSCEEEEETT--------TTEEEEEEECSSSCE
T ss_pred CC----CCCccEEECCCCCEEEEeCC--------CCeEEEEEECCCCcC
Confidence 11 122344443 4555554431 2678888876 4554
No 225
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=45.81 E-value=1.3e+02 Score=25.00 Aligned_cols=99 Identities=10% Similarity=0.113 Sum_probs=51.8
Q ss_pred CCEEEEEeecCC-CCCCcceeEEEECCCCceEECCCCC-CCCCCceeEEEEe-C-CEEEEEecccCCCCCCCCceEEEEe
Q 020682 128 KNLFYVFAGYGS-LDYVHSHVDVYNFTDNKWVDRFDMP-KDMAHSHLGVVSD-G-RYIYIVSGQYGPQCRGPTSRTFVLD 203 (322)
Q Consensus 128 ~~~lyv~GG~~~-~~~~~~~v~~yd~~~~~W~~~~~~~-~p~~r~~~~~~~~-~-~~Iyv~GG~~~~~~~~~~~~v~~yd 203 (322)
++.+|+...... .......+.+||+.+.++..+.... ......-.++++. + +.||+... ...+.+||
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~---------~~~l~~~d 98 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM---------RLGLLVVQ 98 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET---------TTEEEEEE
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC---------CCCEEEEe
Confidence 567888711000 0001135899998888876543210 0001122345554 4 78998764 14688999
Q ss_pred CCCCcEEEc-CCCCCC---CCCcEEEE-ECCEEEEEec
Q 020682 204 SETRKWDSI-PPLPSP---RYSPATQL-WRGRLHVMGG 236 (322)
Q Consensus 204 ~~t~~W~~~-~~~p~~---r~~~~~~~-~~~~Lyv~GG 236 (322)
++ ++...+ ...... ..-..++. -+++||+...
T Consensus 99 ~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 135 (314)
T 1pjx_A 99 TD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAP 135 (314)
T ss_dssp TT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEEC
T ss_pred CC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEec
Confidence 98 777766 432111 11123333 3567887654
No 226
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=44.86 E-value=1.4e+02 Score=28.37 Aligned_cols=102 Identities=12% Similarity=0.082 Sum_probs=50.7
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
++++++.|+.+ ..+.+||..+.....+.....+ . .-.+++.. ++++++.|+.+ ..+..||..+
T Consensus 459 dg~~lasgs~D------~~v~lwd~~~~~~~~~~~~~h~-~-~v~~v~fspdg~~las~s~d--------~~v~~w~~~~ 522 (611)
T 1nr0_A 459 DKQFVAVGGQD------SKVHVYKLSGASVSEVKTIVHP-A-EITSVAFSNNGAFLVATDQS--------RKVIPYSVAN 522 (611)
T ss_dssp TSCEEEEEETT------SEEEEEEEETTEEEEEEEEECS-S-CEEEEEECTTSSEEEEEETT--------SCEEEEEGGG
T ss_pred CCCEEEEeCCC------CeEEEEEccCCceeeeeccCCC-C-ceEEEEECCCCCEEEEEcCC--------CCEEEEEcCC
Confidence 45666666643 2577888877655432222121 1 12233333 56666666643 4566777765
Q ss_pred -CcEEEcCC-CCCCCCC-cEEEE--ECCEEEEEeccCCCCCCCCcceEeee
Q 020682 207 -RKWDSIPP-LPSPRYS-PATQL--WRGRLHVMGGSKENRHTPGLEHWSIA 252 (322)
Q Consensus 207 -~~W~~~~~-~p~~r~~-~~~~~--~~~~Lyv~GG~~~~~~~~~~~~~~~~ 252 (322)
.+ .+.. +...... -..+. -++++++.|+.++ .+..|+++
T Consensus 523 ~~~--~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~-----~v~lW~~~ 566 (611)
T 1nr0_A 523 NFE--LAHTNSWTFHTAKVACVSWSPDNVRLATGSLDN-----SVIVWNMN 566 (611)
T ss_dssp TTE--ESCCCCCCCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETT
T ss_pred CCc--eeeeeeeeecccceeEEEECCCCCEEEEEECCC-----cEEEEECC
Confidence 22 1221 1111111 11222 2677888888654 47778753
No 227
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=44.77 E-value=5.1 Score=36.14 Aligned_cols=52 Identities=6% Similarity=0.050 Sum_probs=26.7
Q ss_pred EEEeCCEEEEEecccCCCCCCCCceEEEEeCCCCc--EEEcCCCCCCCCCcEEEEECCEEEEEeccC
Q 020682 174 VVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK--WDSIPPLPSPRYSPATQLWRGRLHVMGGSK 238 (322)
Q Consensus 174 ~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~ 238 (322)
-++.++.||+.+. -..++.+|.++++ |+.-. .... ...++.++++|+.++.+
T Consensus 5 P~v~~~~v~~gs~---------dg~v~a~d~~tG~~~W~~~~--~~~~--s~p~~~~g~~~v~~s~d 58 (369)
T 2hz6_A 5 VTLPETLLFVSTL---------DGSLHAVSKRTGSIKWTLKE--DPVL--QVPTHVEEPAFLPDPND 58 (369)
T ss_dssp ---CTTEEEEEET---------TSEEEEEETTTCCEEEEEEC--CCSC--CCC-----CCEEECTTT
T ss_pred CeeeCCEEEEEcC---------CCEEEEEECCCCCEEEEecC--CCce--ecceEcCCCEEEEeCCC
Confidence 3456788887543 2578899988765 77543 1111 12234566777776543
No 228
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=44.50 E-value=58 Score=30.43 Aligned_cols=65 Identities=17% Similarity=0.261 Sum_probs=41.1
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEE-----CC-CCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEE
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD-----RF-DMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFV 201 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~-----~~-~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~ 201 (322)
++++|+|-| +..|+||..+++-.. +. ..+.-+.... ++...++++|.|-| +..|+
T Consensus 367 ~~k~yfFkG--------~~yw~yd~~~~~~~~gYPk~I~~~fpgip~~iD-AA~~~~g~~YFFkg----------~~ywr 427 (450)
T 1su3_A 367 TGKTYFFVA--------NKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVD-AVFMKDGFFYFFHG----------TRQYK 427 (450)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEECSSCSEEHHHHSTTSCSCCS-EEEEETTEEEEEET----------TEEEE
T ss_pred CCeEEEEeC--------CEEEEEeCCCccccCCCCcchhhcCCCCCCCcc-EEEEcCCeEEEEeC----------CEEEE
Confidence 589999988 479999987543211 11 1111102233 34446899999987 67899
Q ss_pred EeCCCCcEEE
Q 020682 202 LDSETRKWDS 211 (322)
Q Consensus 202 yd~~t~~W~~ 211 (322)
||..+.+=.+
T Consensus 428 ~d~~~~~v~~ 437 (450)
T 1su3_A 428 FDPKTKRILT 437 (450)
T ss_dssp EETTTTEEEE
T ss_pred EECCcceEec
Confidence 9988766443
No 229
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=43.75 E-value=2.3e+02 Score=27.33 Aligned_cols=86 Identities=15% Similarity=0.149 Sum_probs=50.2
Q ss_pred ceeEEEECCC------C--ceEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCC---cEEEcC
Q 020682 145 SHVDVYNFTD------N--KWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR---KWDSIP 213 (322)
Q Consensus 145 ~~v~~yd~~~------~--~W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~---~W~~~~ 213 (322)
.+++++|..+ . .+..+..... . ........++.||+.+..+.. ...++.+|+.+. .|+.+-
T Consensus 259 ~~l~~~d~~~~~~~~~~~~~~~~l~~~~~--~-~~~~~s~dg~~l~~~s~~~~~-----~~~l~~~d~~~~~~~~~~~l~ 330 (710)
T 2xdw_A 259 NRLWYCDLQQESNGITGILKWVKLIDNFE--G-EYDYVTNEGTVFTFKTNRHSP-----NYRLINIDFTDPEESKWKVLV 330 (710)
T ss_dssp CEEEEEEGGGSSSSSCSSCCCEEEECSSS--S-CEEEEEEETTEEEEEECTTCT-----TCEEEEEETTSCCGGGCEEEE
T ss_pred cEEEEEECcccccccCCccceEEeeCCCC--c-EEEEEeccCCEEEEEECCCCC-----CCEEEEEeCCCCCcccceecc
Confidence 5789999875 3 5766644332 1 222333457888888754321 368999999876 488874
Q ss_pred CCCCCCCCcEEEEE-CCEEEEEeccC
Q 020682 214 PLPSPRYSPATQLW-RGRLHVMGGSK 238 (322)
Q Consensus 214 ~~p~~r~~~~~~~~-~~~Lyv~GG~~ 238 (322)
+-.....-..+... +++|++....+
T Consensus 331 ~~~~~~~~~~~~~~~~~~lv~~~~~~ 356 (710)
T 2xdw_A 331 PEHEKDVLEWVACVRSNFLVLCYLHD 356 (710)
T ss_dssp CCCSSCEEEEEEEETTTEEEEEEEET
T ss_pred CCCCCCeEEEEEEEcCCEEEEEEEEC
Confidence 32221112233444 67787776544
No 230
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=43.67 E-value=36 Score=31.10 Aligned_cols=71 Identities=14% Similarity=0.215 Sum_probs=43.6
Q ss_pred CCEEEEEeecC---CCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CC--EEEEEecccCCCCCCCCceEEE
Q 020682 128 KNLFYVFAGYG---SLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GR--YIYIVSGQYGPQCRGPTSRTFV 201 (322)
Q Consensus 128 ~~~lyv~GG~~---~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~--~Iyv~GG~~~~~~~~~~~~v~~ 201 (322)
++++||.-+.+ .....-+.++++|+++.+-...-+.. ..-.++++. ++ .+|+..+. .+++.+
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg----~~~~~lavs~D~~~~ly~tn~~--------~~~VsV 358 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG----HEIDSINVSQDEKPLLYALSTG--------DKTLYI 358 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE----EEECEEEECSSSSCEEEEEETT--------TTEEEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC----CCcceEEECCCCCeEEEEEcCC--------CCeEEE
Confidence 68999975422 22222357999999987765432222 222344443 43 57776442 478999
Q ss_pred EeCCCCcEE
Q 020682 202 LDSETRKWD 210 (322)
Q Consensus 202 yd~~t~~W~ 210 (322)
||..+.+-.
T Consensus 359 iD~~t~k~~ 367 (386)
T 3sjl_D 359 HDAESGEEL 367 (386)
T ss_dssp EETTTCCEE
T ss_pred EECCCCcEE
Confidence 999988744
No 231
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=42.99 E-value=1.1e+02 Score=27.31 Aligned_cols=71 Identities=15% Similarity=0.152 Sum_probs=40.2
Q ss_pred CCEEEEEeecCC---CCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe--CC-EEEEEecccCCCCCCCCceEEE
Q 020682 128 KNLFYVFAGYGS---LDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GR-YIYIVSGQYGPQCRGPTSRTFV 201 (322)
Q Consensus 128 ~~~lyv~GG~~~---~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~--~~-~Iyv~GG~~~~~~~~~~~~v~~ 201 (322)
++++||...... .....++++++|.++.+-.. .++. +....++++. +. .+|+..+. .+++.+
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~--~i~~--g~~p~~i~~s~Dg~~~l~v~~~~--------~~~V~V 345 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSS--QISL--GHDVDAISVAQDGGPDLYALSAG--------TEVLHI 345 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEE--EEEC--CCCcCeEEECCCCCeEEEEEcCC--------CCeEEE
Confidence 578999754321 11123579999998766422 2222 1223344443 44 46664421 378999
Q ss_pred EeCCCCcEE
Q 020682 202 LDSETRKWD 210 (322)
Q Consensus 202 yd~~t~~W~ 210 (322)
||..+.+=.
T Consensus 346 iD~~t~~vv 354 (373)
T 2mad_H 346 YDAGAGDQD 354 (373)
T ss_pred EECCCCCEE
Confidence 999876643
No 232
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=42.93 E-value=75 Score=30.86 Aligned_cols=102 Identities=14% Similarity=0.069 Sum_probs=53.6
Q ss_pred hccccccCCCCEEECCCCCCCCcccEEEEECCEEEEEeecCCCCCCcceeEEEECCCCc---eEECCCCCCCCCCceeEE
Q 020682 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK---WVDRFDMPKDMAHSHLGV 174 (322)
Q Consensus 98 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~---W~~~~~~~~p~~r~~~~~ 174 (322)
.++.+|....++..+..-.. .....+..++.+|+....+.. ...++++|+.+.. |+.+.+... ...-..+
T Consensus 253 ~l~~~~~~~~~~~~l~~~~~--~~~~~~~~~g~l~~~s~~~~~---~~~l~~~d~~~~~~~~~~~l~~~~~--~~~l~~~ 325 (695)
T 2bkl_A 253 DVYWKRPGEKDFRLLVKGVG--AKYEVHAWKDRFYVLTDEGAP---RQRVFEVDPAKPARASWKEIVPEDS--SASLLSV 325 (695)
T ss_dssp EEEEECTTCSSCEEEEECSS--CCEEEEEETTEEEEEECTTCT---TCEEEEEBTTBCSGGGCEEEECCCS--SCEEEEE
T ss_pred EEEEEcCCCCceEEeecCCC--ceEEEEecCCcEEEEECCCCC---CCEEEEEeCCCCCccCCeEEecCCC--CCeEEEE
Confidence 34444554455655533211 111222245556665443211 2368999987654 877644321 1222334
Q ss_pred EEeCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEc
Q 020682 175 VSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSI 212 (322)
Q Consensus 175 ~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~ 212 (322)
+..+++|++....++ ...++.+|+....-+.+
T Consensus 326 ~~~~~~lv~~~~~dg------~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 326 SIVGGHLSLEYLKDA------TSEVRVATLKGKPVRTV 357 (695)
T ss_dssp EEETTEEEEEEEETT------EEEEEEEETTCCEEEEC
T ss_pred EEECCEEEEEEEECC------EEEEEEEeCCCCeeEEe
Confidence 455888888776543 46788898765544444
No 233
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=41.78 E-value=1.9e+02 Score=25.81 Aligned_cols=66 Identities=15% Similarity=0.267 Sum_probs=36.5
Q ss_pred CEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCCc
Q 020682 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK 208 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 208 (322)
+++++.|+.+ ..+.+||+.+.+.......... ... .+++..++.+++.|+.+ ..+..||..+.+
T Consensus 210 ~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~h~-~~v-~~~~~sd~~~l~s~~~d--------~~v~vwd~~~~~ 273 (450)
T 2vdu_B 210 HQFIITSDRD------EHIKISHYPQCFIVDKWLFGHK-HFV-SSICCGKDYLLLSAGGD--------DKIFAWDWKTGK 273 (450)
T ss_dssp CEEEEEEETT------SCEEEEEESCTTCEEEECCCCS-SCE-EEEEECSTTEEEEEESS--------SEEEEEETTTCC
T ss_pred CcEEEEEcCC------CcEEEEECCCCceeeeeecCCC-Cce-EEEEECCCCEEEEEeCC--------CeEEEEECCCCc
Confidence 6777777754 3578888876654322111111 111 22222256566666632 578889988876
Q ss_pred EE
Q 020682 209 WD 210 (322)
Q Consensus 209 W~ 210 (322)
-.
T Consensus 274 ~~ 275 (450)
T 2vdu_B 274 NL 275 (450)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 234
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=41.78 E-value=1.4e+02 Score=25.35 Aligned_cols=96 Identities=9% Similarity=0.003 Sum_probs=53.3
Q ss_pred CCEEECCCCCCCCcccEEEEE-CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEE
Q 020682 107 LEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIV 184 (322)
Q Consensus 107 ~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~ 184 (322)
...+.+..+|.+..-..++.- ++.||+.--. ...++++|+.... ......+ ..-+++++. +++|||.
T Consensus 20 ~~~~~~~~~p~~~~pegia~~~~g~lyv~d~~------~~~I~~~d~~g~~-~~~~~~~----~~p~gia~~~dG~l~va 88 (306)
T 2p4o_A 20 APAKIITSFPVNTFLENLASAPDGTIFVTNHE------VGEIVSITPDGNQ-QIHATVE----GKVSGLAFTSNGDLVAT 88 (306)
T ss_dssp CCEEEEEEECTTCCEEEEEECTTSCEEEEETT------TTEEEEECTTCCE-EEEEECS----SEEEEEEECTTSCEEEE
T ss_pred CCceEeEeCCCCCCcceEEECCCCCEEEEeCC------CCeEEEECCCCce-EEEEeCC----CCceeEEEcCCCcEEEE
Confidence 444555555554433344432 5678888531 1358999987642 2222222 233455554 5679987
Q ss_pred ecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCC
Q 020682 185 SGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPR 219 (322)
Q Consensus 185 GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r 219 (322)
..... ...++.||+.+.+.+.+...+..+
T Consensus 89 d~~~~------~~~v~~~d~~~g~~~~~~~~~~~~ 117 (306)
T 2p4o_A 89 GWNAD------SIPVVSLVKSDGTVETLLTLPDAI 117 (306)
T ss_dssp EECTT------SCEEEEEECTTSCEEEEEECTTCS
T ss_pred eccCC------cceEEEEcCCCCeEEEEEeCCCcc
Confidence 63211 135888999888887765444433
No 235
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=41.35 E-value=33 Score=28.81 Aligned_cols=93 Identities=10% Similarity=0.054 Sum_probs=50.5
Q ss_pred EECCEEEEEeecCCCCCCcceeEEEE--CCC-------------CceEECCCCCCCCCCceeEEEE-eCCEEEEEecccC
Q 020682 126 QIKNLFYVFAGYGSLDYVHSHVDVYN--FTD-------------NKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYG 189 (322)
Q Consensus 126 ~~~~~lyv~GG~~~~~~~~~~v~~yd--~~~-------------~~W~~~~~~~~p~~r~~~~~~~-~~~~Iyv~GG~~~ 189 (322)
..++++|+|-| +.+|+|+ +.+ +.|..++....| ...-++... .++++|+|-|
T Consensus 70 ~~~g~~~fFKg--------~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p-~~IDAA~~~~~~~k~yfFkG--- 137 (227)
T 3lp9_A 70 TENNEAFIFYE--------NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFE-SGIDAAYRSTRGKEVYLFKG--- 137 (227)
T ss_dssp CSTTEEEEEET--------TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTT-TCCSEEEECSSTTEEEEEET---
T ss_pred CCCCEEEEEeC--------CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCC-CcccEEEEECCCCEEEEEEC---
Confidence 36899999988 4688888 321 123222211001 223323322 2689999987
Q ss_pred CCCCCCCceEEEEeCCCCcEEEc-C-----CCCC------CCCCcEEEEE--CCEEEEEecc
Q 020682 190 PQCRGPTSRTFVLDSETRKWDSI-P-----PLPS------PRYSPATQLW--RGRLHVMGGS 237 (322)
Q Consensus 190 ~~~~~~~~~v~~yd~~t~~W~~~-~-----~~p~------~r~~~~~~~~--~~~Lyv~GG~ 237 (322)
+..|+||..+++-..- | .+|. +..-.++..+ ++++|+|-|.
T Consensus 138 -------~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg~ 192 (227)
T 3lp9_A 138 -------DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKDD 192 (227)
T ss_dssp -------TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEETT
T ss_pred -------CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEECC
Confidence 6789999876542211 0 1221 1222344443 5789999774
No 236
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=41.01 E-value=35 Score=29.86 Aligned_cols=65 Identities=2% Similarity=-0.033 Sum_probs=35.8
Q ss_pred ceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCC
Q 020682 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP 214 (322)
Q Consensus 145 ~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 214 (322)
..++++|+.+.+-..+...+ .+..+....- +++.+++........ ....++.+|..+.....+..
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~---~~~~~~~~sp~dg~~l~~~~~~~~~~--~~~~l~~~d~~~~~~~~l~~ 233 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQEN---QWLGHPIYRPYDDSTVAFCHEGPHDL--VDARMWLINEDGTNMRKVKT 233 (388)
T ss_dssp EEEEEEETTTCCEEEEEEES---SCEEEEEEETTEEEEEEEEECSCTTT--SSCSEEEEETTSCCCEESCC
T ss_pred ceEEEEECCCCceEEeecCC---ccccccEECCCCCCEEEEEEecCCCC--CcceEEEEeCCCCceEEeee
Confidence 57899999887765554322 2222222333 444333333221111 13689999998877777654
No 237
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=40.75 E-value=1.1e+02 Score=28.35 Aligned_cols=123 Identities=8% Similarity=0.039 Sum_probs=53.1
Q ss_pred eeEEEECCCCceEECCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEE
Q 020682 146 HVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPAT 224 (322)
Q Consensus 146 ~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~ 224 (322)
.+.+||...+.-..+..... .-.+++.. ++++++.|+.+ ..+..||.....-..+.. ....-...+
T Consensus 449 ~v~~w~~~~~~~~~~~~~~~----~v~~~~~spd~~~las~~~d--------~~i~iw~~~~~~~~~~~~-h~~~v~~l~ 515 (577)
T 2ymu_A 449 TVKLWNRNGQLLQTLTGHSS----SVRGVAFSPDGQTIASASDD--------KTVKLWNRNGQLLQTLTG-HSSSVRGVA 515 (577)
T ss_dssp EEEEEETTSCEEEEEECCSS----CEEEEEECTTSCEEEEEETT--------SEEEEEETTSCEEEEEEC-CSSCEEEEE
T ss_pred EEEEEECCCCEEEEEcCCCC----CEEEEEEcCCCCEEEEEeCC--------CEEEEEcCCCCEEEEEeC-CCCCEEEEE
Confidence 46777765543333222211 12233433 56666666642 456677754333222221 111111111
Q ss_pred EEECCEEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccCCCCCcCceeEEEECCEEEEEecCCCC
Q 020682 225 QLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVFNDRLFVVGGQEGD 294 (322)
Q Consensus 225 ~~~~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~lyv~GG~~~~ 294 (322)
..-++++++.|+.++ .+..|+.. ...-..+.. ...........-+++.++.||.++.
T Consensus 516 ~s~dg~~l~s~~~dg-----~v~lwd~~-------~~~~~~~~~-h~~~v~~~~fs~dg~~l~s~~~D~~ 572 (577)
T 2ymu_A 516 FSPDGQTIASASDDK-----TVKLWNRN-------GQLLQTLTG-HSSSVWGVAFSPDGQTIASASSDKT 572 (577)
T ss_dssp ECTTSSCEEEEETTS-----EEEEECTT-------SCEEEEEEC-CSSCEEEEEECTTSSCEEEEETTSC
T ss_pred EcCCCCEEEEEECcC-----EEEEEeCC-------CCEEEEEcC-CCCCEEEEEEcCCCCEEEEEeCCCE
Confidence 122566677777543 25555531 221111111 1111111222346777778887754
No 238
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=40.65 E-value=1.7e+02 Score=24.95 Aligned_cols=59 Identities=14% Similarity=0.047 Sum_probs=30.3
Q ss_pred CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEee
Q 020682 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 178 ~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
++.+.+.|+.+ ..+..||..+.+-...-.... ..-..+.+ +++.++.||.++ .+..|++
T Consensus 87 ~~~~l~s~s~D--------~~v~lwd~~~~~~~~~~~~h~--~~v~~v~~sp~~~~l~s~~~d~-----~i~~wd~ 147 (343)
T 2xzm_R 87 ENCFAISSSWD--------KTLRLWDLRTGTTYKRFVGHQ--SEVYSVAFSPDNRQILSAGAER-----EIKLWNI 147 (343)
T ss_dssp STTEEEEEETT--------SEEEEEETTSSCEEEEEECCC--SCEEEEEECSSTTEEEEEETTS-----CEEEEES
T ss_pred CCCEEEEEcCC--------CcEEEEECCCCcEEEEEcCCC--CcEEEEEECCCCCEEEEEcCCC-----EEEEEec
Confidence 45556666643 567788988775432211111 11112222 456667777643 3666765
No 239
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=39.42 E-value=69 Score=27.12 Aligned_cols=51 Identities=14% Similarity=0.085 Sum_probs=29.0
Q ss_pred CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEE-ECC-EEEEEec
Q 020682 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQL-WRG-RLHVMGG 236 (322)
Q Consensus 178 ~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~~-~Lyv~GG 236 (322)
++++|+.++. ...+.++|+.+.+....-+.+....-+.++. -++ .+|+.+.
T Consensus 10 ~~~~~v~~~~--------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~ 62 (349)
T 1jmx_B 10 GHEYMIVTNY--------PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN 62 (349)
T ss_dssp TCEEEEEEET--------TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET
T ss_pred CCEEEEEeCC--------CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeC
Confidence 6778887764 3688999999887554322222101223333 234 5777764
No 240
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=38.96 E-value=1.7e+02 Score=26.10 Aligned_cols=104 Identities=9% Similarity=0.152 Sum_probs=49.9
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCc-eEECCCCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK-WVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~-W~~~~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~ 204 (322)
++.+++.|+.+ ..+.+||+.+.. ...+..+... ...-.+++.. +..+++.|+.+ ..+..||.
T Consensus 243 ~~~~l~s~~~d------g~i~i~d~~~~~~~~~~~~~~~~-~~~v~~i~~~p~~~~~l~tg~~d--------g~v~vwd~ 307 (430)
T 2xyi_A 243 HESLFGSVADD------QKLMIWDTRNNNTSKPSHTVDAH-TAEVNCLSFNPYSEFILATGSAD--------KTVALWDL 307 (430)
T ss_dssp CTTEEEEEETT------SEEEEEETTCSCSSSCSEEEECC-SSCEEEEEECSSCTTEEEEEETT--------SEEEEEET
T ss_pred CCCEEEEEeCC------CeEEEEECCCCCCCcceeEeecC-CCCeEEEEeCCCCCCEEEEEeCC--------CeEEEEeC
Confidence 45666666643 358889988652 1111111110 1112233333 34578888753 56788888
Q ss_pred CCCcEEEcCCCCCCCCCcEEEEE--CC-EEEEEeccCCCCCCCCcceEeee
Q 020682 205 ETRKWDSIPPLPSPRYSPATQLW--RG-RLHVMGGSKENRHTPGLEHWSIA 252 (322)
Q Consensus 205 ~t~~W~~~~~~p~~r~~~~~~~~--~~-~Lyv~GG~~~~~~~~~~~~~~~~ 252 (322)
.+.. ..+..+.........+.+ ++ .+++.||.++ .+..|++.
T Consensus 308 ~~~~-~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~-----~i~iwd~~ 352 (430)
T 2xyi_A 308 RNLK-LKLHSFESHKDEIFQVQWSPHNETILASSGTDR-----RLHVWDLS 352 (430)
T ss_dssp TCTT-SCSEEEECCSSCEEEEEECSSCTTEEEEEETTS-----CCEEEEGG
T ss_pred CCCC-CCeEEeecCCCCEEEEEECCCCCCEEEEEeCCC-----cEEEEeCC
Confidence 7632 011111111111222233 23 5788877644 37777764
No 241
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=38.30 E-value=2.4e+02 Score=27.02 Aligned_cols=57 Identities=16% Similarity=0.085 Sum_probs=30.1
Q ss_pred EEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEee
Q 020682 180 YIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 180 ~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
.+++.|+.+ ..+..||+.+.+-...-..... ....+.+ ++++++.||.++ .+..|++
T Consensus 532 ~~l~s~s~d--------~~v~vwd~~~~~~~~~~~~h~~--~v~~v~~spdg~~l~sg~~Dg-----~i~iwd~ 590 (694)
T 3dm0_A 532 PTIVSASWD--------KTVKVWNLSNCKLRSTLAGHTG--YVSTVAVSPDGSLCASGGKDG-----VVLLWDL 590 (694)
T ss_dssp CEEEEEETT--------SCEEEEETTTCCEEEEECCCSS--CEEEEEECTTSSEEEEEETTS-----BCEEEET
T ss_pred ceEEEEeCC--------CeEEEEECCCCcEEEEEcCCCC--CEEEEEEeCCCCEEEEEeCCC-----eEEEEEC
Confidence 355566543 4677888887654332111111 1122222 567788888654 3666765
No 242
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=38.10 E-value=3e+02 Score=27.01 Aligned_cols=103 Identities=17% Similarity=0.289 Sum_probs=58.2
Q ss_pred CCCEEECCCCCCCCcccEEEEE-CCEEEEEeecCCC---CCCcceeEEEECCCCceEECCCCCCC--CCCceeE-EEEe-
Q 020682 106 DLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSL---DYVHSHVDVYNFTDNKWVDRFDMPKD--MAHSHLG-VVSD- 177 (322)
Q Consensus 106 ~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~---~~~~~~v~~yd~~~~~W~~~~~~~~p--~~r~~~~-~~~~- 177 (322)
..+|+.+..+|.....+.++.. .+.+|+..+.... ......+++++-...+|+.+.+.+.. ..+.+.+ +++.
T Consensus 231 G~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~~~~i~v~p 310 (737)
T 2cn3_A 231 GVTWKAVPGQPKGLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCFAGLAVDR 310 (737)
T ss_dssp TSCCEECTTCCCSSEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSSCTTSTTCCSEEEEEEECT
T ss_pred CCceEECCCCCCcccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCCCCCCcccccccccEEEcC
Confidence 4589999877764443433322 6789987653211 11224689999999999998876541 1233333 4443
Q ss_pred --CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEc
Q 020682 178 --GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSI 212 (322)
Q Consensus 178 --~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~ 212 (322)
.+.||+.+..... +-..+++=.-.-.+|+.+
T Consensus 311 ~~~~~ly~~~~~~~~----~~~~l~~S~DgG~tW~~~ 343 (737)
T 2cn3_A 311 QNPDIIMVTSMNAWW----PDEYIFRSTDGGATWKNI 343 (737)
T ss_dssp TCTTCEEEEEECCCS----SCCCEEEESSTTSSCEES
T ss_pred CCCCEEEEEecccCC----CCccEEEeCCCCccccch
Confidence 3678887643100 012333333334567766
No 243
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=37.18 E-value=1e+02 Score=26.23 Aligned_cols=126 Identities=14% Similarity=0.087 Sum_probs=58.1
Q ss_pred hccccccCCCCE-EECCCCCCCCcccEEEEECCEEEEEeecCCCCC--C-cceeEEEECCCCceEECCCCCCCCCCceeE
Q 020682 98 TFADLPAPDLEW-EQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDY--V-HSHVDVYNFTDNKWVDRFDMPKDMAHSHLG 173 (322)
Q Consensus 98 ~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~--~-~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~ 173 (322)
.++.+|..+.+. +.+.. + .....+...+.+++.+..+.... . ..+++.+| +.+++.+... . . ...
T Consensus 153 ~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-~--~--~~~ 221 (347)
T 2gop_A 153 TFWIFDTESEEVIEEFEK-P---RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-V--S--FYA 221 (347)
T ss_dssp EEEEEETTTTEEEEEEEE-E---TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-E--S--EEE
T ss_pred eEEEEECCCCeEEeeecC-C---CcccccCCCCeEEEEEecccccccccccccEEEeC--CCceEEeccC-c--c--eee
Confidence 466677766665 44433 2 22233333333444444332211 2 35788888 5666655332 1 1 112
Q ss_pred EEEeCCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEEEECCEEEEEeccC
Q 020682 174 VVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSK 238 (322)
Q Consensus 174 ~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~ 238 (322)
....+..|++.+...... ......++.+| +.++..+..-... .......+.+.+|+.+..+
T Consensus 222 ~spdg~~l~~~~~~~~~~-~~~~~~l~~~d--~~~~~~l~~~~~~-~~~~~~~~sdg~~~~~~~~ 282 (347)
T 2gop_A 222 VDSDGERILLYGKPEKKY-MSEHNKLYIYD--GKEVMGILDEVDR-GVGQAKIKDGKVYFTLFEE 282 (347)
T ss_dssp EEECSSCEEEEECCSSSC-CCSSCEEEEEC--SSCEEESSTTCCS-EEEEEEEETTEEEEEEEET
T ss_pred ECCCCCEEEEEEccccCC-ccccceEEEEC--CCceEeccccCCc-ccCCccEEcCcEEEEEecC
Confidence 222344455444322111 11146899999 6777777543221 1111123334477666544
No 244
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=37.13 E-value=2.5e+02 Score=27.32 Aligned_cols=84 Identities=19% Similarity=0.141 Sum_probs=48.0
Q ss_pred cceeEEEECCCC--c-eEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCC--CcEEEcCCCCCC
Q 020682 144 HSHVDVYNFTDN--K-WVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSET--RKWDSIPPLPSP 218 (322)
Q Consensus 144 ~~~v~~yd~~~~--~-W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t--~~W~~~~~~p~~ 218 (322)
.++++++|..+. + |+.+..... ... ..+...++.||+....+.. ...++.+|..+ ..|+.+-+-...
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~--~~~-~~~~~dg~~l~~~s~~~~~-----~~~l~~~d~~~~~~~~~~l~~~~~~ 364 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLK--AQW-DFVDGVGDQLWFVSGDGAP-----LKKIVRVDLSGSTPRFDTVVPESKD 364 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSS--SCE-EEEEEETTEEEEEECTTCT-----TCEEEEEECSSSSCEEEEEECCCSS
T ss_pred cceEEEEECCCCCCcccEEecCCCC--ceE-EEEeccCCEEEEEECCCCC-----CCEEEEEeCCCCccccEEEecCCCC
Confidence 357999998876 6 777654332 222 2233467888887643221 37899999988 579887432221
Q ss_pred CCCcEEEEECCEEEEEec
Q 020682 219 RYSPATQLWRGRLHVMGG 236 (322)
Q Consensus 219 r~~~~~~~~~~~Lyv~GG 236 (322)
. -..+...+++|++...
T Consensus 365 ~-l~~~~~~~~~lv~~~~ 381 (741)
T 1yr2_A 365 N-LESVGIAGNRLFASYI 381 (741)
T ss_dssp E-EEEEEEEBTEEEEEEE
T ss_pred e-EEEEEEECCEEEEEEE
Confidence 1 1122333566555543
No 245
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=37.09 E-value=3e+02 Score=26.73 Aligned_cols=87 Identities=10% Similarity=0.119 Sum_probs=46.3
Q ss_pred CceEEEEeCCCC--c-EEEcCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceEeeeeecccccc--CceEeccCCC
Q 020682 196 TSRTFVLDSETR--K-WDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALE--KAWRTEIPIP 270 (322)
Q Consensus 196 ~~~v~~yd~~t~--~-W~~~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~--~~W~~~~~~p 270 (322)
.++++.+|..+. . |..+..-...... .....+++||+....+. ....+..++++ + ..|+.+.+-.
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~~-~~~~dg~~l~~~s~~~~--~~~~l~~~d~~-------~~~~~~~~l~~~~ 362 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKAQWD-FVDGVGDQLWFVSGDGA--PLKKIVRVDLS-------GSTPRFDTVVPES 362 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSSCEE-EEEEETTEEEEEECTTC--TTCEEEEEECS-------SSSCEEEEEECCC
T ss_pred cceEEEEECCCCCCcccEEecCCCCceEE-EEeccCCEEEEEECCCC--CCCEEEEEeCC-------CCccccEEEecCC
Confidence 478999999877 6 8887543222222 22346677887754321 12234444432 4 4688765432
Q ss_pred CCcCceeEEEECCEEEEEecCCC
Q 020682 271 RGGPHRACFVFNDRLFVVGGQEG 293 (322)
Q Consensus 271 ~~~~~~~~~~~~~~lyv~GG~~~ 293 (322)
.... ..+...+++|++....++
T Consensus 363 ~~~l-~~~~~~~~~lv~~~~~dg 384 (741)
T 1yr2_A 363 KDNL-ESVGIAGNRLFASYIHDA 384 (741)
T ss_dssp SSEE-EEEEEEBTEEEEEEEETT
T ss_pred CCeE-EEEEEECCEEEEEEEECC
Confidence 2221 123344777776665443
No 246
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=36.79 E-value=1.8e+02 Score=24.15 Aligned_cols=65 Identities=8% Similarity=0.042 Sum_probs=32.4
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~ 207 (322)
++++++.|+.+ ..+..++.............. ..........++..++.|+.+ ..+..+|....
T Consensus 97 dg~~l~s~~~d------~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~s~s~d--------~~~~~~d~~~~ 160 (340)
T 4aow_A 97 DGQFALSGSWD------GTLRLWDLTTGTTTRRFVGHT--KDVLSVAFSSDNRQIVSGSRD--------KTIKLWNTLGV 160 (340)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEEEECCS--SCEEEEEECTTSSCEEEEETT--------SCEEEECTTSC
T ss_pred CCCEEEEEccc------ccceEEeecccceeeeecCCC--CceeEEEEeecCccceeecCC--------CeEEEEEeCCC
Confidence 45666667654 246777777666544332222 112222222244555666543 34556776554
Q ss_pred c
Q 020682 208 K 208 (322)
Q Consensus 208 ~ 208 (322)
.
T Consensus 161 ~ 161 (340)
T 4aow_A 161 C 161 (340)
T ss_dssp E
T ss_pred c
Confidence 3
No 247
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=36.60 E-value=1.6e+02 Score=28.39 Aligned_cols=75 Identities=19% Similarity=0.256 Sum_probs=47.4
Q ss_pred ceeEEEECCCCc--eEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCCc--EEEcCCCCCCC-
Q 020682 145 SHVDVYNFTDNK--WVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK--WDSIPPLPSPR- 219 (322)
Q Consensus 145 ~~v~~yd~~~~~--W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~~r- 219 (322)
..+..+|+.+.+ |+.-...+ .....+++.++.||+ |.. -..+..||.+|.+ |+.- ++...
T Consensus 453 G~l~A~D~~tG~~~W~~~~~~~----~~~g~~~tagg~vf~-gt~--------dg~l~A~D~~tG~~lW~~~--l~~g~~ 517 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKMERFA----VWGGTMATAGDLVFY-GTL--------DGYLKARDSDTGDLLWKFK--IPSGAI 517 (599)
T ss_dssp EEEEEECTTTCCEEEEEEESSC----CCSBCEEETTTEEEE-ECT--------TSEEEEEETTTCCEEEEEE--CSSCCC
T ss_pred CeEEEEECCCCCEEeEecCCCC----ccCcceEecCCEEEE-ECC--------CCeEEEEECCCCCEEEEee--CCCCcE
Confidence 468889998765 88743332 122345667888888 422 2678999999886 8752 33322
Q ss_pred CCcEEEEECCEEEEE
Q 020682 220 YSPATQLWRGRLHVM 234 (322)
Q Consensus 220 ~~~~~~~~~~~Lyv~ 234 (322)
..+.....+|++||.
T Consensus 518 ~~P~~y~~~G~qyv~ 532 (599)
T 1w6s_A 518 GYPMTYTHKGTQYVA 532 (599)
T ss_dssp SCCEEEEETTEEEEE
T ss_pred eccEEEEeCCEEEEE
Confidence 233444589998875
No 248
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=35.77 E-value=2.4e+02 Score=25.24 Aligned_cols=95 Identities=15% Similarity=0.088 Sum_probs=49.1
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCce-EECCCCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKW-VDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W-~~~~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~ 204 (322)
++.||+...... ..++++|+....- ..+.....+.....+++++. ++.||+... ...+++||+
T Consensus 182 g~~l~~~d~~~~-----~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~---------~~~I~~~d~ 247 (409)
T 3hrp_A 182 KQRVYSIGWEGT-----HTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS---------NKNFGRFNV 247 (409)
T ss_dssp SSEEEEEBSSTT-----CEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT---------TCEEEEEET
T ss_pred CCcEEEEecCCC-----ceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC---------CCcEEEEEC
Confidence 456776644221 1588999875432 23311111001222344554 689999432 257999999
Q ss_pred CCCcEEEcC---CCCCCCCC--cEEEEE--CCEEEEEec
Q 020682 205 ETRKWDSIP---PLPSPRYS--PATQLW--RGRLHVMGG 236 (322)
Q Consensus 205 ~t~~W~~~~---~~p~~r~~--~~~~~~--~~~Lyv~GG 236 (322)
.+..-..+. ........ ..++.. ++.||+...
T Consensus 248 ~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 248 KTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp TTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred CCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 888755541 11112222 144444 578998753
No 249
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=33.99 E-value=1.1e+02 Score=25.57 Aligned_cols=62 Identities=11% Similarity=0.171 Sum_probs=37.9
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEE-----CC-CCCCC----CCCceeEEEE--eCCEEEEEecccCCCCCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD-----RF-DMPKD----MAHSHLGVVS--DGRYIYIVSGQYGPQCRGP 195 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~-----~~-~~~~p----~~r~~~~~~~--~~~~Iyv~GG~~~~~~~~~ 195 (322)
++++|+|-| +.+|+||..+++-.. +. ..|.. .+..--++.. .++++|+|-|
T Consensus 129 ~~k~yfFkG--------~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg--------- 191 (227)
T 3lp9_A 129 GKEVYLFKG--------DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD--------- 191 (227)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET---------
T ss_pred CCEEEEEEC--------CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC---------
Confidence 689999988 469999987553211 00 11110 0011223333 3689999987
Q ss_pred CceEEEEeCCCC
Q 020682 196 TSRTFVLDSETR 207 (322)
Q Consensus 196 ~~~v~~yd~~t~ 207 (322)
+..|+||..+.
T Consensus 192 -~~Ywr~d~~~~ 202 (227)
T 3lp9_A 192 -DHYARVKVTPX 202 (227)
T ss_dssp -TEEEEEECCSS
T ss_pred -CEEEEEECCcc
Confidence 67889998765
No 250
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=33.87 E-value=2e+02 Score=23.68 Aligned_cols=53 Identities=6% Similarity=-0.113 Sum_probs=25.6
Q ss_pred CEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-CC----EEEEEeccc
Q 020682 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GR----YIYIVSGQY 188 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-~~----~Iyv~GG~~ 188 (322)
+.+++.|+.+ ..+..++........+..+... ...-.+++.. ++ .+++.|+.+
T Consensus 182 ~~~l~~~~~~------~~~~~~~~~~~~~~~~~~~~~h-~~~i~~~~~~p~~~~~~~~l~s~~~d 239 (351)
T 3f3f_A 182 PEKLAVSALE------QAIIYQRGKDGKLHVAAKLPGH-KSLIRSISWAPSIGRWYQLIATGCKD 239 (351)
T ss_dssp CCEEEEEETT------EEEEEEECTTSCEEEEEECCCC-CSCEEEEEECCCSSCSSEEEEEEETT
T ss_pred CcEEEEecCC------CcEEEEccCCCceeeeeecCCC-CcceeEEEECCCCCCcceEEEEEcCC
Confidence 5666776643 2244455555555443333321 1122334444 33 677777754
No 251
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=30.52 E-value=97 Score=30.31 Aligned_cols=92 Identities=18% Similarity=0.288 Sum_probs=49.0
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCC--Cce-EECCC--CCCCCCCceeEEE-EeCCEEEEEecccCCCCCCCCceEEE
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTD--NKW-VDRFD--MPKDMAHSHLGVV-SDGRYIYIVSGQYGPQCRGPTSRTFV 201 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~--~~W-~~~~~--~~~p~~r~~~~~~-~~~~~Iyv~GG~~~~~~~~~~~~v~~ 201 (322)
++++|+|-| +.+|+||..+ ..+ +.+.. +|....+.-++.. ..++++|+|-| +..++
T Consensus 500 ~~k~yFFkG--------~~yWry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG----------~~ywr 561 (631)
T 1ck7_A 500 EEKAVFFAG--------NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG----------DKFWR 561 (631)
T ss_dssp TTEEEEEET--------TEEEEEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEET----------TEEEE
T ss_pred CCEEEEEec--------CEEEEECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEEC----------CEEEE
Confidence 688999987 4689998531 111 11211 1211112222221 13689999987 67889
Q ss_pred EeCCCCcEEE-----cC-CC-CCCCCCcEEEEEC--CEEEEEecc
Q 020682 202 LDSETRKWDS-----IP-PL-PSPRYSPATQLWR--GRLHVMGGS 237 (322)
Q Consensus 202 yd~~t~~W~~-----~~-~~-p~~r~~~~~~~~~--~~Lyv~GG~ 237 (322)
||..+++=.+ +. .. ..+..-.++..++ +++|+|-|.
T Consensus 562 yd~~~~~vd~gYPk~i~~~w~G~p~~iDAAf~~~~~g~~YFFkG~ 606 (631)
T 1ck7_A 562 YNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGA 606 (631)
T ss_dssp EETTTTEECTTCCEETTTSCSSCCTTCCEEECCTTSCBCEEEETT
T ss_pred EcCCcccccCCCCcchHhhcCCCCCCCcEeEEEcCCCeEEEEECC
Confidence 9987653221 11 11 1122233445554 789998774
No 252
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=30.47 E-value=2.8e+02 Score=24.32 Aligned_cols=65 Identities=6% Similarity=0.034 Sum_probs=34.4
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe-----CCEEEEEecccCCCCCCCCceEEEE
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-----GRYIYIVSGQYGPQCRGPTSRTFVL 202 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~-----~~~Iyv~GG~~~~~~~~~~~~v~~y 202 (322)
++..++.|+.+ ..+.+||..+.+....-..+. ...-.+++.. ++.+++.|+.+ ..+..|
T Consensus 225 ~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~--~~~v~~~~~~~~~s~~~~~l~s~~~d--------g~i~iw 288 (437)
T 3gre_A 225 ECCVLILGTTR------GIIDIWDIRFNVLIRSWSFGD--HAPITHVEVCQFYGKNSVIVVGGSSK--------TFLTIW 288 (437)
T ss_dssp TSCEEEEEETT------SCEEEEETTTTEEEEEEBCTT--CEEEEEEEECTTTCTTEEEEEEESTT--------EEEEEE
T ss_pred CCCEEEEEcCC------CeEEEEEcCCccEEEEEecCC--CCceEEEEeccccCCCccEEEEEcCC--------CcEEEE
Confidence 56677777754 348889998765433212222 1111122211 34455555532 467788
Q ss_pred eCCCCc
Q 020682 203 DSETRK 208 (322)
Q Consensus 203 d~~t~~ 208 (322)
|..+.+
T Consensus 289 d~~~~~ 294 (437)
T 3gre_A 289 NFVKGH 294 (437)
T ss_dssp ETTTTE
T ss_pred EcCCCc
Confidence 887765
No 253
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=29.92 E-value=3.2e+02 Score=24.92 Aligned_cols=58 Identities=5% Similarity=0.061 Sum_probs=28.5
Q ss_pred CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCCCCCCcEEE-EECCEEEEEeccCCCCCCCCcceEe
Q 020682 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQ-LWRGRLHVMGGSKENRHTPGLEHWS 250 (322)
Q Consensus 178 ~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~-~~~~~Lyv~GG~~~~~~~~~~~~~~ 250 (322)
++++++.++.+ ..+..||.....-..+..-..+ -..++ .-++++++.|+.++ .+..|+
T Consensus 437 d~~~l~~~~~d--------~~v~~w~~~~~~~~~~~~~~~~--v~~~~~spd~~~las~~~d~-----~i~iw~ 495 (577)
T 2ymu_A 437 DDQTIASASDD--------KTVKLWNRNGQLLQTLTGHSSS--VRGVAFSPDGQTIASASDDK-----TVKLWN 495 (577)
T ss_dssp TSSEEEEEETT--------SEEEEEETTSCEEEEEECCSSC--EEEEEECTTSCEEEEEETTS-----EEEEEE
T ss_pred CCCEEEEEcCC--------CEEEEEECCCCEEEEEcCCCCC--EEEEEEcCCCCEEEEEeCCC-----EEEEEc
Confidence 55566666542 4567788655444333221111 11122 22567777777543 355565
No 254
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=29.11 E-value=3.7e+02 Score=25.27 Aligned_cols=102 Identities=10% Similarity=0.113 Sum_probs=49.4
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~ 207 (322)
+++.++.|+.+ ..+.++|..+.+....-...........+++ .++..++.++.+ ..+..+|+.+.
T Consensus 250 dg~~l~s~s~D------~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~s~s~d--------~~i~~~~~~~~ 314 (611)
T 1nr0_A 250 DGTKIASASAD------KTIKIWNVATLKVEKTIPVGTRIEDQQLGII-WTKQALVSISAN--------GFINFVNPELG 314 (611)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEEEECCSSGGGCEEEEE-ECSSCEEEEETT--------CCEEEEETTTT
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCceeeeecCCCCccceeEEEE-EcCCEEEEEeCC--------CcEEEEeCCCC
Confidence 45666666643 3578889887665442222211011222222 344455555532 45667887766
Q ss_pred cEEEcCCCCCCCCCcEEEEE--CCEEEEEeccCCCCCCCCcceEee
Q 020682 208 KWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 208 ~W~~~~~~p~~r~~~~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
+-...-.... ..-..+.+ +++.++.|+.++ .+..|++
T Consensus 315 ~~~~~~~gh~--~~v~~l~~spdg~~l~s~s~D~-----~v~~Wd~ 353 (611)
T 1nr0_A 315 SIDQVRYGHN--KAITALSSSADGKTLFSADAEG-----HINSWDI 353 (611)
T ss_dssp EEEEEECCCS--SCEEEEEECTTSSEEEEEETTS-----CEEEEET
T ss_pred CcceEEcCCC--CCEEEEEEeCCCCEEEEEeCCC-----cEEEEEC
Confidence 5322211111 11112222 566677777644 3667775
No 255
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=29.10 E-value=4.3e+02 Score=26.06 Aligned_cols=106 Identities=13% Similarity=0.146 Sum_probs=57.7
Q ss_pred CCCEEECCCCCCCCc---ccEEEEE----CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCC------------
Q 020682 106 DLEWEQMPSAPVPRL---DGAAIQI----KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKD------------ 166 (322)
Q Consensus 106 ~~~W~~~~~~p~~r~---~~~~~~~----~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p------------ 166 (322)
-.+|+++..++.... ......+ .+.||+.....+ .+++=+=.-++|+.+...+..
T Consensus 164 G~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g------~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p~ 237 (763)
T 3a0f_A 164 AQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAVG------GLWVTWDGGANWSQVGGQPTQWSDWTKSIVAAS 237 (763)
T ss_dssp TSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESSTT------CEEEESSSSSSCEECTTCCCSCCHHHHHHHHHH
T ss_pred CcCccccccCcccCCCccceEEEEECCCCCCEEEEEEeCCC------eEEEECCCCCCccccCCCccccccccccccccc
Confidence 458999987765322 2222222 246777654321 234333335679998755421
Q ss_pred ------CCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCC
Q 020682 167 ------MAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPS 217 (322)
Q Consensus 167 ------~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~ 217 (322)
.++..+.+++. ++.+|+...............+++.+-...+|+++.+.|.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~g~v~rS~D~G~tW~~~~~~~~ 295 (763)
T 3a0f_A 238 GTAIQSSGPLPIKIALGKNGRLYITYSDAPGPWGVLYGEVWSYDPTNGNWKHITPSRE 295 (763)
T ss_dssp CCCCSSSSCEEEEEEECTTSCEEEEEESSCSSSCCCCEEEEEEETTTTEEEECCTTSS
T ss_pred cccccCCCCcceeEEECCCCcEEEEeccCCCCCCCcceeEEEEeCCCCceEECCCCCC
Confidence 12333444443 6778887432100000113688899989999999976543
No 256
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=29.05 E-value=3.8e+02 Score=25.43 Aligned_cols=80 Identities=14% Similarity=0.140 Sum_probs=44.6
Q ss_pred eeEEEECCCCceEECCCCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeCCCCcEE---Ec-CCCCCCC
Q 020682 146 HVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWD---SI-PPLPSPR 219 (322)
Q Consensus 146 ~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~---~~-~~~p~~r 219 (322)
.+++.|..+.....+..++. .+.-|..... +.++|+.... .+.+.++|+++++=. .+ ...|.+.
T Consensus 321 ~v~~vd~~~~~~~~v~~i~~--~~~~~d~~~~pdgr~~~va~~~--------sn~V~ViD~~t~kl~~~i~vgg~~Phpg 390 (567)
T 1qks_A 321 KILLVDYTDLNNLKTTEISA--ERFLHDGGLDGSHRYFITAANA--------RNKLVVIDTKEGKLVAIEDTGGQTPHPG 390 (567)
T ss_dssp EEEEEETTCSSEEEEEEEEC--CSSEEEEEECTTSCEEEEEEGG--------GTEEEEEETTTTEEEEEEECSSSSBCCT
T ss_pred eEEEEecCCCccceeeeeec--cccccCceECCCCCEEEEEeCC--------CCeEEEEECCCCcEEEEEeccCcCCCCc
Confidence 57778877665444444443 4555555554 4556665432 478999999988633 22 3344443
Q ss_pred CCcEEEEE-CCEEEEEe
Q 020682 220 YSPATQLW-RGRLHVMG 235 (322)
Q Consensus 220 ~~~~~~~~-~~~Lyv~G 235 (322)
.+.....- ++.+|+.+
T Consensus 391 ~g~~~~~p~~g~v~~t~ 407 (567)
T 1qks_A 391 RGANFVHPTFGPVWATS 407 (567)
T ss_dssp TCEEEEETTTEEEEEEE
T ss_pred cceeeECCCCCcEEEeC
Confidence 33332222 25677765
No 257
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=28.46 E-value=2.7e+02 Score=23.60 Aligned_cols=62 Identities=6% Similarity=0.077 Sum_probs=32.3
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEE-CCCCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEeCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD-RFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~-~~~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
++.+.+.|+.+ ..+.++|..+.+... +..-. ..-.+++.. ++..++.||.+ ..+..||..
T Consensus 87 ~~~~l~s~s~D------~~v~lwd~~~~~~~~~~~~h~----~~v~~v~~sp~~~~l~s~~~d--------~~i~~wd~~ 148 (343)
T 2xzm_R 87 ENCFAISSSWD------KTLRLWDLRTGTTYKRFVGHQ----SEVYSVAFSPDNRQILSAGAE--------REIKLWNIL 148 (343)
T ss_dssp STTEEEEEETT------SEEEEEETTSSCEEEEEECCC----SCEEEEEECSSTTEEEEEETT--------SCEEEEESS
T ss_pred CCCEEEEEcCC------CcEEEEECCCCcEEEEEcCCC----CcEEEEEECCCCCEEEEEcCC--------CEEEEEecc
Confidence 34556666643 357888988765432 11111 122233433 45555666643 456677776
Q ss_pred CC
Q 020682 206 TR 207 (322)
Q Consensus 206 t~ 207 (322)
..
T Consensus 149 ~~ 150 (343)
T 2xzm_R 149 GE 150 (343)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 258
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=28.27 E-value=3.1e+02 Score=24.23 Aligned_cols=132 Identities=14% Similarity=0.081 Sum_probs=67.9
Q ss_pred ECCEEEEEeecCCCCCCcceeEEEECCCCceEECC--CCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEE
Q 020682 127 IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRF--DMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVL 202 (322)
Q Consensus 127 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~--~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~y 202 (322)
.++.||+.-.. ...++++++....-..+. .+.. -.++++. ++.||+.--.. ...++++
T Consensus 169 ~~g~lY~~d~~------~~~I~~~~~dg~~~~~l~~~~l~~-----P~giavdp~~g~ly~td~~~-------~~~I~r~ 230 (386)
T 3v65_B 169 VHDKLYWTDSG------TSRIEVANLDGAHRKVLLWQSLEK-----PRAIALHPMEGTIYWTDWGN-------TPRIEAS 230 (386)
T ss_dssp TTTEEEEEETT------TTEEEECBTTSCSCEEEECSSCSC-----EEEEEEETTTTEEEEEECSS-------SCEEEEE
T ss_pred CCCeEEEEcCC------CCeEEEEeCCCCceEEeecCCCCC-----CcEEEEEcCCCeEEEeccCC-------CCEEEEE
Confidence 37889987542 135888887755433322 2222 2345555 78999874211 2689999
Q ss_pred eCCCCcEEEcCCCCCCCCCc-EEEE--ECCEEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccCCCCCcCceeEE
Q 020682 203 DSETRKWDSIPPLPSPRYSP-ATQL--WRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACF 279 (322)
Q Consensus 203 d~~t~~W~~~~~~p~~r~~~-~~~~--~~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~~~~~~~~ 279 (322)
|+....-+.+.. .....+ ++++ .+++||+.-.. ...++++++ +- ++.-..+.. .... -.+++
T Consensus 231 ~~dG~~~~~~~~--~~~~~PnGlavd~~~~~lY~aD~~-----~~~I~~~d~-----dG-~~~~~~~~~-~~~~-P~gia 295 (386)
T 3v65_B 231 SMDGSGRRIIAD--THLFWPNGLTIDYAGRRMYWVDAK-----HHVIERANL-----DG-SHRKAVISQ-GLPH-PFAIT 295 (386)
T ss_dssp ETTSCSCEEEEC--SSCSCEEEEEEEGGGTEEEEEETT-----TTEEEEECT-----TS-CSCEEEECS-SCSS-EEEEE
T ss_pred eCCCCCcEEEEE--CCCCCeeeEEEeCCCCEEEEEECC-----CCEEEEEeC-----CC-CeeEEEEEC-CCCC-ceEEE
Confidence 987644333321 111112 3444 36789988432 223444443 21 222222211 1111 13666
Q ss_pred EECCEEEEEecC
Q 020682 280 VFNDRLFVVGGQ 291 (322)
Q Consensus 280 ~~~~~lyv~GG~ 291 (322)
+.++.||+.--.
T Consensus 296 v~~~~ly~td~~ 307 (386)
T 3v65_B 296 VFEDSLYWTDWH 307 (386)
T ss_dssp EETTEEEEEETT
T ss_pred EECCEEEEeeCC
Confidence 689999988643
No 259
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=27.54 E-value=2.3e+02 Score=23.67 Aligned_cols=65 Identities=8% Similarity=0.121 Sum_probs=36.8
Q ss_pred CEEEEEeecCCCCCCcceeEEEECCCCc--eEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
+++++.|..+ ..+.++|.++.+ |+.-..-. ...+...+.-++.|++.+ -..+..||+ +
T Consensus 5 ~~~lv~~~~~------~~v~~~d~~tG~~~w~~~~~~~---~~~~~~~~~pdG~ilvs~----------~~~V~~~d~-~ 64 (276)
T 3no2_A 5 QHLLVGGSGW------NKIAIINKDTKEIVWEYPLEKG---WECNSVAATKAGEILFSY----------SKGAKMITR-D 64 (276)
T ss_dssp CEEEEECTTC------SEEEEEETTTTEEEEEEECCTT---CCCCEEEECTTSCEEEEC----------BSEEEEECT-T
T ss_pred CcEEEeeCCC------CEEEEEECCCCeEEEEeCCCcc---CCCcCeEECCCCCEEEeC----------CCCEEEECC-C
Confidence 5666666532 458888986654 76533221 122333344477788832 156888998 4
Q ss_pred Cc--EEEcC
Q 020682 207 RK--WDSIP 213 (322)
Q Consensus 207 ~~--W~~~~ 213 (322)
.+ |+--.
T Consensus 65 G~~~W~~~~ 73 (276)
T 3no2_A 65 GRELWNIAA 73 (276)
T ss_dssp SCEEEEEEC
T ss_pred CCEEEEEcC
Confidence 43 66443
No 260
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=27.53 E-value=3.3e+02 Score=24.29 Aligned_cols=91 Identities=18% Similarity=0.083 Sum_probs=47.7
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~ 207 (322)
+++||+.... ...+.++|+++..-..+..... ..+.+....++.||+..... ...++.+|+.+.
T Consensus 141 ~g~lyv~d~~------~~~I~~id~~~g~~~~~~~~~~---~~~ia~~~~g~~l~~~d~~~-------~~~I~~~d~~~~ 204 (409)
T 3hrp_A 141 NNTVLAYQRD------DPRVRLISVDDNKVTTVHPGFK---GGKPAVTKDKQRVYSIGWEG-------THTVYVYMKASG 204 (409)
T ss_dssp TTEEEEEETT------TTEEEEEETTTTEEEEEEETCC---BCBCEECTTSSEEEEEBSST-------TCEEEEEEGGGT
T ss_pred CCCEEEEecC------CCcEEEEECCCCEEEEeeccCC---CCceeEecCCCcEEEEecCC-------CceEEEEEcCCC
Confidence 5789998652 1368999998776555433221 11122222356778765321 137889998754
Q ss_pred c-EEEcCCCC--CCCCCcEEEEE--CCEEEEE
Q 020682 208 K-WDSIPPLP--SPRYSPATQLW--RGRLHVM 234 (322)
Q Consensus 208 ~-W~~~~~~p--~~r~~~~~~~~--~~~Lyv~ 234 (322)
. ...+...+ ....-+.+++. ++.||+.
T Consensus 205 ~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~ 236 (409)
T 3hrp_A 205 WAPTRIGQLGSTFSGKIGAVALDETEEWLYFV 236 (409)
T ss_dssp TCEEEEEECCTTSCSCCCBCEECTTSSEEEEE
T ss_pred ceeEEeeeccchhcCCcEEEEEeCCCCeEEEE
Confidence 3 23331111 11111233332 5789984
No 261
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=26.95 E-value=2.1e+02 Score=24.93 Aligned_cols=65 Identities=15% Similarity=0.231 Sum_probs=39.4
Q ss_pred CCEEEEEeecCCC----CCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEE
Q 020682 128 KNLFYVFAGYGSL----DYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFV 201 (322)
Q Consensus 128 ~~~lyv~GG~~~~----~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~ 201 (322)
++++||....+.. .....+++++|+++.+ .+..++. .. ..++++. +.+||+.++ +++.+
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~--~~-p~~ia~spdg~~l~v~n~----------~~v~v 329 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPG--RD-ALSMTIDQQRNLMLTLDG----------GNVNV 329 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEEC--TT-CCEEEEETTTTEEEEECS----------SCEEE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEec--CC-eeEEEECCCCCEEEEeCC----------CeEEE
Confidence 5899998652211 1122479999998765 3333443 22 4455554 567887542 56778
Q ss_pred EeCCCC
Q 020682 202 LDSETR 207 (322)
Q Consensus 202 yd~~t~ 207 (322)
||.++.
T Consensus 330 ~D~~t~ 335 (361)
T 2oiz_A 330 YDISQP 335 (361)
T ss_dssp EECSSS
T ss_pred EECCCC
Confidence 899887
No 262
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=25.69 E-value=3e+02 Score=23.17 Aligned_cols=76 Identities=9% Similarity=0.100 Sum_probs=40.7
Q ss_pred ceeEEEECCCCceEECC-CCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeCCC---CcEEEcCCCCCC
Q 020682 145 SHVDVYNFTDNKWVDRF-DMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSET---RKWDSIPPLPSP 218 (322)
Q Consensus 145 ~~v~~yd~~~~~W~~~~-~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t---~~W~~~~~~p~~ 218 (322)
..+++||+.+.+...+. .+.. ..++++. ++.|||.-.. ...+++||+.+ .+.+.+..++.|
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~~-----p~gia~~~dg~~lyv~d~~--------~~~I~~~~~~~~~~~~~~~~~~~~gP 231 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELHV-----PGGAEVSADSSFVLVAEFL--------SHQIVKYWLEGPKKGTAEVLVKIPNP 231 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEESC-----CCEEEECTTSSEEEEEEGG--------GTEEEEEESSSTTTTCEEEEEECSSE
T ss_pred ceEEEEeCCCCEEEEeccCCcc-----CcceEECCCCCEEEEEeCC--------CCeEEEEECCCCcCCccceEEeCCCC
Confidence 46899999877655432 2222 1234554 3468887432 26788998875 234333222211
Q ss_pred CCCcEEEE-ECCEEEEEec
Q 020682 219 RYSPATQL-WRGRLHVMGG 236 (322)
Q Consensus 219 r~~~~~~~-~~~~Lyv~GG 236 (322)
..+++ -+|+|||...
T Consensus 232 ---~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 232 ---GNIKRNADGHFWVSSS 247 (322)
T ss_dssp ---EEEEECTTSCEEEEEE
T ss_pred ---CCeEECCCCCEEEEec
Confidence 12332 2467888643
No 263
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=25.11 E-value=3e+02 Score=23.04 Aligned_cols=94 Identities=10% Similarity=0.184 Sum_probs=48.6
Q ss_pred ccccccCCCCEEECCCCCCCCcccEEEE-ECCEEEEEeecCCCCCCcceeEEEECCCCc---eEECCC----CCCCCCCc
Q 020682 99 FADLPAPDLEWEQMPSAPVPRLDGAAIQ-IKNLFYVFAGYGSLDYVHSHVDVYNFTDNK---WVDRFD----MPKDMAHS 170 (322)
Q Consensus 99 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~---W~~~~~----~~~p~~r~ 170 (322)
+..+|..+.+.+.+...+..+.....+. .++.+|+.-.. ...++++|+.+.. |..-.. .+......
T Consensus 97 v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~ 170 (306)
T 2p4o_A 97 VVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSY------RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPA 170 (306)
T ss_dssp EEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETT------TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCS
T ss_pred EEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECC------CCeEEEEeCCCCcEeEEEECCccccccccCCCCc
Confidence 5566766666665554444333333332 25567775321 1368999987642 211110 11100112
Q ss_pred eeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCC
Q 020682 171 HLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 171 ~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t 206 (322)
..++...++.||+.--. ...+++||+..
T Consensus 171 pngis~dg~~lyv~d~~--------~~~I~~~~~~~ 198 (306)
T 2p4o_A 171 ANGLKRFGNFLYVSNTE--------KMLLLRIPVDS 198 (306)
T ss_dssp EEEEEEETTEEEEEETT--------TTEEEEEEBCT
T ss_pred CCCcCcCCCEEEEEeCC--------CCEEEEEEeCC
Confidence 22344456789987531 37899999864
No 264
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=24.15 E-value=3.8e+02 Score=23.78 Aligned_cols=64 Identities=11% Similarity=0.074 Sum_probs=37.6
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCc---eEECCCCCCCCCC-ceeEEEEe--CCEEEEEecccCCCCCCCCceEEE
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK---WVDRFDMPKDMAH-SHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFV 201 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~---W~~~~~~~~p~~r-~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~ 201 (322)
.+.+||.+.... ..++++|+..+. |-.-.+... .+ ..-++++. ++.|++..+ ...++.
T Consensus 147 ~GnaYVt~s~~~-----~~I~rV~pdG~~~~~~~~~~~~~~--~~~G~nGIv~~pdg~~Liv~~~---------~g~L~~ 210 (334)
T 2p9w_A 147 DGNSYVAFALGM-----PAIARVSADGKTVSTFAWESGNGG--QRPGYSGITFDPHSNKLIAFGG---------PRALTA 210 (334)
T ss_dssp TSCEEEEEEESS-----CEEEEECTTSCCEEEEEECCCCSS--SCCSCSEEEEETTTTEEEEESS---------SSSEEE
T ss_pred CCCEEEeCCCCC-----CeEEEEeCCCCEEeeeeecCCCcc--cccCcceEEEeCCCCEEEEEcC---------CCeEEE
Confidence 578999765421 358999987653 543222111 22 23355666 556777654 267889
Q ss_pred EeCCCC
Q 020682 202 LDSETR 207 (322)
Q Consensus 202 yd~~t~ 207 (322)
||..+.
T Consensus 211 fD~~~p 216 (334)
T 2p9w_A 211 FDVSKP 216 (334)
T ss_dssp EECSSS
T ss_pred EcCCCC
Confidence 998753
No 265
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=23.29 E-value=2.2e+02 Score=26.14 Aligned_cols=76 Identities=12% Similarity=-0.037 Sum_probs=41.8
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe--CCEEEEEecccCCCC-CCCCceEEEEeC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQC-RGPTSRTFVLDS 204 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~-~~~~~~v~~yd~ 204 (322)
++++||.-....... +.+.++|+.+.+=.. .++. .... .+++. +.++||.--...... -...+.+.++|+
T Consensus 84 ~~~vyV~n~~~~~~~--~~VsVID~~t~~vv~--~I~v--G~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~ 156 (426)
T 3c75_H 84 ARRVYIQDPAHFAAI--TQQFVIDGSTGRILG--MTDG--GFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP 156 (426)
T ss_dssp TTEEEEEECTTTCSS--EEEEEEETTTTEEEE--EEEE--CSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCEEEEECCCcCCCC--CeEEEEECCCCEEEE--EEEC--CCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEEC
Confidence 457788765321111 579999998876433 2322 2222 34443 678998752110000 000368999999
Q ss_pred CCCcEE
Q 020682 205 ETRKWD 210 (322)
Q Consensus 205 ~t~~W~ 210 (322)
.+.+=.
T Consensus 157 ~t~~vv 162 (426)
T 3c75_H 157 VTFLPI 162 (426)
T ss_dssp TTCCEE
T ss_pred CCCcEE
Confidence 998743
No 266
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=22.95 E-value=5.6e+02 Score=25.33 Aligned_cols=106 Identities=13% Similarity=0.220 Sum_probs=55.9
Q ss_pred CCCEEECCCCCC---CCcccEEEEE----CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCC-----------
Q 020682 106 DLEWEQMPSAPV---PRLDGAAIQI----KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDM----------- 167 (322)
Q Consensus 106 ~~~W~~~~~~p~---~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~----------- 167 (322)
-.+|+++..+|. .-.......+ .+.||+..... ..+++=.=.-++|+.+..++...
T Consensus 152 G~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~------~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~ 225 (789)
T 1sqj_A 152 AKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAP------QGMYVTHDGGVSWEPVAGQPSSWLNRTTGAFPDK 225 (789)
T ss_dssp TSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESST------TCEEEESSTTSSCEECTTCCCSCCHHHHHTSTTC
T ss_pred CcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCC------CeEEEEcCCCcCcccCCCCcCccccccccccCcc
Confidence 468999876542 1122223333 24677765421 12333222346899987444210
Q ss_pred ---CCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeCCCCcEEEcCCCCC
Q 020682 168 ---AHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPS 217 (322)
Q Consensus 168 ---~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~~p~ 217 (322)
....+.+++. ++.||+..+............+++.+-.-.+|+++.+.|.
T Consensus 226 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g~~g~l~~S~DgG~tW~~~~~~~~ 280 (789)
T 1sqj_A 226 KPASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQNRTSGAWDDITPRVG 280 (789)
T ss_dssp CCSSSSCEEEEEEECSSEEEEEEESSCSSSCCCCCCEEEEETTTCCEEECCCCTT
T ss_pred cccccccceeEEcCCCCeEEEEEecCCCCCCCCCceEEEEeCCCCceEECcCCCC
Confidence 0111444443 7889987532111000114678888888899999976543
No 267
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=22.78 E-value=1.1e+02 Score=29.20 Aligned_cols=59 Identities=14% Similarity=0.188 Sum_probs=36.0
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
++.+||....+ +.+.++|+.+.+-... ++. ...-|.+++. ++++|+.+. ...+..||+.
T Consensus 166 ~~~~~V~~~~~------~~V~viD~~t~~v~~~--i~~--g~~p~~v~~SpDGr~lyv~~~---------dg~V~viD~~ 226 (567)
T 1qks_A 166 ENLFSVTLRDA------GQIALIDGSTYEIKTV--LDT--GYAVHISRLSASGRYLFVIGR---------DGKVNMIDLW 226 (567)
T ss_dssp GGEEEEEETTT------TEEEEEETTTCCEEEE--EEC--SSCEEEEEECTTSCEEEEEET---------TSEEEEEETT
T ss_pred CceEEEEeCCC------CeEEEEECCCCeEEEE--EeC--CCCccceEECCCCCEEEEEcC---------CCeEEEEECC
Confidence 56778775422 4699999988764332 222 2223445553 567887642 2579999985
No 268
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=22.76 E-value=3.9e+02 Score=23.48 Aligned_cols=33 Identities=6% Similarity=0.061 Sum_probs=20.2
Q ss_pred eCCEEEEEecccCCCC-CCCCceEEEEeCCCCcE
Q 020682 177 DGRYIYIVSGQYGPQC-RGPTSRTFVLDSETRKW 209 (322)
Q Consensus 177 ~~~~Iyv~GG~~~~~~-~~~~~~v~~yd~~t~~W 209 (322)
.++++||......... ....++++++|+++.+=
T Consensus 277 d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v 310 (373)
T 2mad_H 277 SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT 310 (373)
T ss_pred CCCEEEEEeccCCcccccCCCCeEEEEECCCCEE
Confidence 3688999764321110 11247899999988764
No 269
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=22.03 E-value=3.3e+02 Score=22.30 Aligned_cols=96 Identities=13% Similarity=0.171 Sum_probs=49.6
Q ss_pred EEEEECCEEEEEeecCCCCCCcceeEEEECCCCc-eE--ECCCC-CC-CCCCceeEEEE-eCCEEEEEecccCCCCCCCC
Q 020682 123 AAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK-WV--DRFDM-PK-DMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPT 196 (322)
Q Consensus 123 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~-W~--~~~~~-~~-p~~r~~~~~~~-~~~~Iyv~GG~~~~~~~~~~ 196 (322)
++..+++++|+|-| +.+|+++..... .. .+... +. | ....++... .++++|+|-|
T Consensus 35 Ai~~~~g~~~fFkg--------~~~Wr~~~~~~~~~~P~~I~~~wp~lp-~~IDAA~~~~~~~k~yfFkG---------- 95 (218)
T 1gen_A 35 GIAQIRGEIFFFKD--------RFIWRTVTPRDKPMGPLLVATFWPELP-EKIDAVYEAPQEEKAVFFAG---------- 95 (218)
T ss_dssp EEEEETTEEEEEET--------TEEEEESSTTSCCEEEEEGGGTCTTSC-SCCSEEEEETTTTEEEEEET----------
T ss_pred EEEeCCCcEEEEEC--------CEEEEEeCCCCccCCCEEHHHhcCCCC-CCccEEEEECCCCEEEEEeC----------
Confidence 44557999999988 356776654422 11 12111 11 1 233333332 2689999987
Q ss_pred ceEEEEeCCCCc---EEEcCC--CCCC-CCCcEEEEE--CCEEEEEecc
Q 020682 197 SRTFVLDSETRK---WDSIPP--LPSP-RYSPATQLW--RGRLHVMGGS 237 (322)
Q Consensus 197 ~~v~~yd~~t~~---W~~~~~--~p~~-r~~~~~~~~--~~~Lyv~GG~ 237 (322)
+..|+||..+.. =+.+.. +|.. ..--++..+ ++++|+|-|.
T Consensus 96 ~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG~ 144 (218)
T 1gen_A 96 NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGD 144 (218)
T ss_dssp TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEETT
T ss_pred CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEECC
Confidence 678888853110 001111 2221 112344443 6899999774
No 270
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=22.00 E-value=3.2e+02 Score=22.17 Aligned_cols=134 Identities=16% Similarity=0.082 Sum_probs=0.0
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
++.||+.-... ..+.+||+....-..+.... ...-+++++. ++.||+.... ...+.++|+.
T Consensus 47 ~~~ly~~d~~~------~~I~~~~~~g~~~~~~~~~~---~~~p~~ia~d~~~~~lyv~d~~--------~~~I~~~~~~ 109 (267)
T 1npe_A 47 DKVVYWTDISE------PSIGRASLHGGEPTTIIRQD---LGSPEGIALDHLGRTIFWTDSQ--------LDRIEVAKMD 109 (267)
T ss_dssp TTEEEEEETTT------TEEEEEESSSCCCEEEECTT---CCCEEEEEEETTTTEEEEEETT--------TTEEEEEETT
T ss_pred CCEEEEEECCC------CEEEEEecCCCCcEEEEECC---CCCccEEEEEecCCeEEEEECC--------CCEEEEEEcC
Q ss_pred CCcEEEcCCCCCCCCCcEEEEE-CCEEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccCCCCCcCceeEEEE-CC
Q 020682 206 TRKWDSIPPLPSPRYSPATQLW-RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFVF-ND 283 (322)
Q Consensus 206 t~~W~~~~~~p~~r~~~~~~~~-~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~~~~~~~~~~-~~ 283 (322)
...-+.+.+....+....++.- +++||+...... ...+.+++++ ...-+.+..........-++-. ++
T Consensus 110 g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~---~~~I~~~~~d-------g~~~~~~~~~~~~~P~gia~d~~~~ 179 (267)
T 1npe_A 110 GTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRD---NPKIETSHMD-------GTNRRILAQDNLGLPNGLTFDAFSS 179 (267)
T ss_dssp SCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSS---SCEEEEEETT-------SCCCEEEECTTCSCEEEEEEETTTT
T ss_pred CCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCC---CcEEEEEecC-------CCCcEEEEECCCCCCcEEEEcCCCC
Q ss_pred EEEEE
Q 020682 284 RLFVV 288 (322)
Q Consensus 284 ~lyv~ 288 (322)
.||+.
T Consensus 180 ~lyv~ 184 (267)
T 1npe_A 180 QLCWV 184 (267)
T ss_dssp EEEEE
T ss_pred EEEEE
No 271
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=21.90 E-value=3.7e+02 Score=27.35 Aligned_cols=78 Identities=14% Similarity=-0.053 Sum_probs=42.2
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEE-eCCEEEEEecccC--CCCCCCCceEEEEeC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYG--PQCRGPTSRTFVLDS 204 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~-~~~~Iyv~GG~~~--~~~~~~~~~v~~yd~ 204 (322)
+++.+++++.+ .+++++|+++.+-..+..... .... .++. -+++.+++++.+. .........++.+|.
T Consensus 389 DG~~la~~~~~------~~v~~~d~~tg~~~~~~~~~~--~~v~-~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~ 459 (1045)
T 1k32_A 389 NGKFAVVANDR------FEIMTVDLETGKPTVIERSRE--AMIT-DFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDM 459 (1045)
T ss_dssp TSSEEEEEETT------SEEEEEETTTCCEEEEEECSS--SCCC-CEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEET
T ss_pred CCCEEEEECCC------CeEEEEECCCCceEEeccCCC--CCcc-ceEECCCCCeEEEEecCccccccCCCCCeEEEEEC
Confidence 45555565532 368999999877665532211 1111 2233 3555555555432 110011368999999
Q ss_pred CCCcEEEcCC
Q 020682 205 ETRKWDSIPP 214 (322)
Q Consensus 205 ~t~~W~~~~~ 214 (322)
.+.+...+..
T Consensus 460 ~~g~~~~l~~ 469 (1045)
T 1k32_A 460 EGRKIFAATT 469 (1045)
T ss_dssp TTTEEEECSC
T ss_pred CCCcEEEeeC
Confidence 9888666543
No 272
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=21.74 E-value=3.7e+02 Score=22.73 Aligned_cols=111 Identities=8% Similarity=0.128 Sum_probs=61.7
Q ss_pred CEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEeCCEEEEEecccCCCCCCCCceEEEEeCCCCc
Q 020682 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK 208 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~~~~Iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 208 (322)
+.|||....+ ..+.+||+.+.+....-..+.. ...-.+++...+.+|+..|....... ....+..+|+.+.+
T Consensus 208 g~l~v~d~~~------~~I~~~~~~~G~~~~~~~~~~~-~~~~~~~~~~pg~~~~~~g~~~v~~~-~~~~v~~~~~~~g~ 279 (329)
T 3fvz_A 208 DQLCVADREN------GRIQCFKTDTKEFVREIKHASF-GRNVFAISYIPGFLFAVNGKPYFGDQ-EPVQGFVMNFSSGE 279 (329)
T ss_dssp TEEEEEETTT------TEEEEEETTTCCEEEEECCTTT-TTCEEEEEEETTEEEEEECCCCTTCS-CCCCEEEEETTTCC
T ss_pred CEEEEEECCC------CEEEEEECCCCcEEEEEecccc-CCCcceeeecCCEEEEeCCCEEeccC-CCcEEEEEEcCCCe
Confidence 7888886532 3689999986555432222211 22233455556888888775332211 13688999988887
Q ss_pred EEEc-CCCCCCCCCc-EEEE-ECCEEEEEeccCCCCCCCCcceEeee
Q 020682 209 WDSI-PPLPSPRYSP-ATQL-WRGRLHVMGGSKENRHTPGLEHWSIA 252 (322)
Q Consensus 209 W~~~-~~~p~~r~~~-~~~~-~~~~Lyv~GG~~~~~~~~~~~~~~~~ 252 (322)
.... .+.+.....+ .+++ -+|.|||....+ +.+..|+++
T Consensus 280 ~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~-----~~I~~~~~~ 321 (329)
T 3fvz_A 280 IIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHT-----NTVWKFTLT 321 (329)
T ss_dssp EEEEECCSSSCCSSEEEEEECTTSEEEEEESSS-----CCEEEEEEE
T ss_pred EEEEEcCCCCccCCeeEEEECCCCCEEEEECCC-----CEEEEEeCC
Confidence 6554 2222222223 3333 256899886543 346677653
No 273
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=21.73 E-value=3.9e+02 Score=23.05 Aligned_cols=109 Identities=4% Similarity=-0.096 Sum_probs=56.0
Q ss_pred ECCEEEEEeecCCCCCCcceeEEEECCCCceEECC--CCCCCCCCceeEEEEe-CCEEEEEecccCCCCCCCCceEEEEe
Q 020682 127 IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRF--DMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLD 203 (322)
Q Consensus 127 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~--~~~~p~~r~~~~~~~~-~~~Iyv~GG~~~~~~~~~~~~v~~yd 203 (322)
-+++.++.++.+.... ..++.+|.......... .+... ...-.++++. ++++++.|+.+ ..+..||
T Consensus 229 pdg~~l~~~s~d~~~~--~~i~~~~~~~~~~~~~~~~~~~~~-~~~V~~~~~Spdg~~lasgs~D--------~~V~iwd 297 (365)
T 4h5i_A 229 ADDTVLIAASLKKGKG--IVLTKISIKSGNTSVLRSKQVTNR-FKGITSMDVDMKGELAVLASND--------NSIALVK 297 (365)
T ss_dssp ETTEEEEEEEESSSCC--EEEEEEEEETTEEEEEEEEEEESS-CSCEEEEEECTTSCEEEEEETT--------SCEEEEE
T ss_pred CCCCEEEEEecCCcce--eEEeecccccceecceeeeeecCC-CCCeEeEEECCCCCceEEEcCC--------CEEEEEE
Confidence 3677777777654432 23566776655543321 11110 1112233333 67777777753 4678899
Q ss_pred CCCCcEEE-cCCCCCCCCCcEEEEECCEEEEEeccCCCCCCCCcceEee
Q 020682 204 SETRKWDS-IPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 204 ~~t~~W~~-~~~~p~~r~~~~~~~~~~~Lyv~GG~~~~~~~~~~~~~~~ 251 (322)
.++.+-.. +.......-...+..-++++++-|+.++ ++..|++
T Consensus 298 ~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~-----tvrvw~i 341 (365)
T 4h5i_A 298 LKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAAN-----TIHIIKL 341 (365)
T ss_dssp TTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTS-----EEEEEEC
T ss_pred CCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCC-----eEEEEEc
Confidence 98765322 2221111111111123677888877644 4777775
No 274
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=21.49 E-value=6.1e+02 Score=25.24 Aligned_cols=134 Identities=15% Similarity=0.049 Sum_probs=72.1
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECC--CCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEe
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRF--DMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLD 203 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~--~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd 203 (322)
+++||+.-.. ...++++++....-+.+. .+.. -.++++. ++.||+.--. . ...|++++
T Consensus 482 ~~~LY~tD~~------~~~I~v~~ldG~~~~~l~~~~l~~-----P~gIaVDp~~g~LYwtD~g----~---~~~I~~~~ 543 (791)
T 3m0c_C 482 HSNIYWTDSV------LGTVSVADTKGVKRKTLFRENGSK-----PRAIVVDPVHGFMYWTDWG----T---PAKIKKGG 543 (791)
T ss_dssp TTEEEEEETT------TTEEEEEETTSSSEEEEEECTTCC-----EEEEEEETTTTEEEEEECS----S---SCEEEEEE
T ss_pred CCcEEEEecC------CCeEEEEeCCCCeEEEEEeCCCCC-----cceEEEecCCCCEEEecCC----C---CCeEEEEe
Confidence 6789987432 246888998866554442 2222 2356664 6899997511 0 26788888
Q ss_pred CCCCcEEEcCCCCCCCCCc-EEEEE--CCEEEEEeccCCCCCCCCcceEeeeeeccccccCceEeccCCCCCcCceeEEE
Q 020682 204 SETRKWDSIPPLPSPRYSP-ATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRACFV 280 (322)
Q Consensus 204 ~~t~~W~~~~~~p~~r~~~-~~~~~--~~~Lyv~GG~~~~~~~~~~~~~~~~v~~~~~~~~~W~~~~~~p~~~~~~~~~~ 280 (322)
+....=..+.. .....+ ++++- +++||+.-.. ...+++++++ .+.....+.....-....++++
T Consensus 544 ~dG~~~~~lv~--~~l~~P~GLavD~~~~~LYwaD~~-----~~~I~~~d~d------G~~~~~v~~~~~~l~~P~glav 610 (791)
T 3m0c_C 544 LNGVDIYSLVT--ENIQWPNGITLDLLSGRLYWVDSK-----LHSISSIDVN------GGNRKTILEDEKRLAHPFSLAV 610 (791)
T ss_dssp TTSCCEEEEEC--SSCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETT------SCSCEEEEECTTTTSSEEEEEE
T ss_pred cCCCceEEEEe--CCCCCceEEEEecCCCeEEEEeCC-----CCcEEEEecC------CCceEEEecCCCccCCCCEEEE
Confidence 87655444421 111222 33433 6789998432 2345555542 1222222221111112236777
Q ss_pred ECCEEEEEecCC
Q 020682 281 FNDRLFVVGGQE 292 (322)
Q Consensus 281 ~~~~lyv~GG~~ 292 (322)
.+++||+.--.+
T Consensus 611 ~~~~lYwtD~~~ 622 (791)
T 3m0c_C 611 FEDKVFWTDIIN 622 (791)
T ss_dssp ETTEEEEEETTT
T ss_pred eCCEEEEEECCC
Confidence 899999887543
No 275
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=20.75 E-value=4.4e+02 Score=23.24 Aligned_cols=86 Identities=17% Similarity=0.188 Sum_probs=49.5
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCC--CCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEe
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFD--MPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLD 203 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~--~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd 203 (322)
++.||+.--. ...++++++.....+.+.. +..| .++++. ++.||+.-.. ...+++++
T Consensus 127 ~~~ly~~D~~------~~~I~r~~~~g~~~~~~~~~~~~~p-----~glavd~~~g~lY~~d~~--------~~~I~~~~ 187 (386)
T 3v65_B 127 RELVFWSDVT------LDRILRANLNGSNVEEVVSTGLESP-----GGLAVDWVHDKLYWTDSG--------TSRIEVAN 187 (386)
T ss_dssp TTEEEEEETT------TTEEEEEETTSCCEEEEECSSCSCC-----CCEEEETTTTEEEEEETT--------TTEEEECB
T ss_pred CCeEEEEeCC------CCcEEEEecCCCCcEEEEeCCCCCc-----cEEEEEeCCCeEEEEcCC--------CCeEEEEe
Confidence 5789987431 1468999998776555422 2222 234444 7899997542 36788888
Q ss_pred CCCCcEEEcC--CCCCCCCCcEEEEE--CCEEEEEe
Q 020682 204 SETRKWDSIP--PLPSPRYSPATQLW--RGRLHVMG 235 (322)
Q Consensus 204 ~~t~~W~~~~--~~p~~r~~~~~~~~--~~~Lyv~G 235 (322)
+....-..+. .+..|+ .+++. ++.||+.-
T Consensus 188 ~dg~~~~~l~~~~l~~P~---giavdp~~g~ly~td 220 (386)
T 3v65_B 188 LDGAHRKVLLWQSLEKPR---AIALHPMEGTIYWTD 220 (386)
T ss_dssp TTSCSCEEEECSSCSCEE---EEEEETTTTEEEEEE
T ss_pred CCCCceEEeecCCCCCCc---EEEEEcCCCeEEEec
Confidence 7655433321 222222 33443 67888863
No 276
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=20.31 E-value=2.8e+02 Score=25.14 Aligned_cols=89 Identities=10% Similarity=0.152 Sum_probs=49.0
Q ss_pred CCEEEEEeecCCCCCCcceeEEEECCCCceEECCCCCCCCCCceeEEEEe--CCEEEEEecccCCCCCCCCceEEEEeCC
Q 020682 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~p~~r~~~~~~~~--~~~Iyv~GG~~~~~~~~~~~~v~~yd~~ 205 (322)
++.||+.--. ..+.++|+++++...+... ...-..+++. ++.||+.....+.. ...+..++..
T Consensus 149 ~g~Lyv~d~~-------~~I~~id~~~~~v~~~~~~----~~~P~~ia~d~~G~~lyvad~~~~~~----~~~v~~~~~~ 213 (430)
T 3tc9_A 149 HNHLYLVGEQ-------HPTRLIDFEKEYVSTVYSG----LSKVRTICWTHEADSMIITNDQNNND----RPNNYILTRE 213 (430)
T ss_dssp EEEEEEEEBT-------EEEEEEETTTTEEEEEECC----CSCEEEEEECTTSSEEEEEECCSCTT----SEEEEEEEGG
T ss_pred CCeEEEEeCC-------CcEEEEECCCCEEEEEecC----CCCcceEEEeCCCCEEEEEeCCCCcc----cceEEEEeCC
Confidence 4788988442 4689999998887765442 2223345554 45699986533221 2346666654
Q ss_pred CCcE---EEcCCCCCCCCCcEEEEE--CCEEEEEe
Q 020682 206 TRKW---DSIPPLPSPRYSPATQLW--RGRLHVMG 235 (322)
Q Consensus 206 t~~W---~~~~~~p~~r~~~~~~~~--~~~Lyv~G 235 (322)
. .+ ..++.+..+ +.+++. ++.||+.-
T Consensus 214 g-~~~~~~~l~~~~~p---~giavdp~~g~lyv~d 244 (430)
T 3tc9_A 214 S-GFKVITELTKGQNC---NGAETHPINGELYFNS 244 (430)
T ss_dssp G-TSCSEEEEEECSSC---CCEEECTTTCCEEEEE
T ss_pred C-ceeeeeeeccCCCc---eEEEEeCCCCEEEEEE
Confidence 3 23 233333222 334433 56788763
Done!