BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 020687
         (322 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8CG65|SSPO_MOUSE SCO-spondin OS=Mus musculus GN=Sspo PE=2 SV=2
          Length = 4998

 Score = 35.4 bits (80), Expect = 0.56,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 9/94 (9%)

Query: 1    MHAKTDSEVTSLAPSSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVL-SPAGSPPH 59
            +HA T S   +L+P+ P + PR         S D   G +  TS HS P     AG  P 
Sbjct: 2129 LHASTTSRTPALSPTQPGKFPRE-------VSEDLRQGAEAMTS-HSPPSSGETAGLIPA 2180

Query: 60   SHSSIGRHSRESSSSRFSGSLKPGSRKISPNDAS 93
            S  ++    +   +   + +  PG++ + P  A+
Sbjct: 2181 SEGTLPVSGQPMQTLSATSTFPPGAKSLHPGMAA 2214


>sp|Q31G65|TILS_THICR tRNA(Ile)-lysidine synthase OS=Thiomicrospira crunogena (strain
           XCL-2) GN=tilS PE=3 SV=1
          Length = 420

 Score = 35.0 bits (79), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 7/72 (9%)

Query: 70  ESSSSRFSGSLK-PGSRKISPNDASRGGQRKGQKRWNKECDVIEEEGLLEDEERRSGLPR 128
           E  SS+  G L+    R ++PND S G Q+K  K+W KE  V E      D +R   L +
Sbjct: 350 EQLSSKQGGKLEGTVVRPLNPNDLSSGSQKKALKKWFKESKVPE-----WDRQRWPVLEK 404

Query: 129 RCYFLAFVLGFF 140
               +A +LGF+
Sbjct: 405 EGQVVA-ILGFY 415


>sp|Q1QEI9|UBIG_PSYCK 3-demethylubiquinone-9 3-methyltransferase OS=Psychrobacter
           cryohalolentis (strain K5) GN=ubiG PE=3 SV=2
          Length = 257

 Score = 34.3 bits (77), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 6/62 (9%)

Query: 197 YRNTGTFFGVHVTSNPLDLSYSEITIASGAIRKFYQSRKSQKTVSVAVMGNKIPLYGSGA 256
           +  TG F  +H   NPL L++ E  +  G     Y S  SQKT  + + G K+   G G 
Sbjct: 27  WNKTGAFATLH-EINPLRLNWIEENVKRG-----YVSADSQKTAEMGLAGKKVLDVGCGG 80

Query: 257 GL 258
           G+
Sbjct: 81  GI 82


>sp|O95613|PCNT_HUMAN Pericentrin OS=Homo sapiens GN=PCNT PE=1 SV=4
          Length = 3336

 Score = 32.7 bits (73), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 13/68 (19%)

Query: 27   YVQSPSRDSHDGEKT----------TTSFHSTPVLSPAGSPPHSHSSIGRHSRESSSSRF 76
            + +SP  D H  ++T          TTSF S   LS   SPP         S +S  S F
Sbjct: 2291 WAESPPADDHHVQRTAVEKDVEDFITTSFDSQETLS---SPPPGLEGKADRSEKSDGSGF 2347

Query: 77   SGSLKPGS 84
               L PGS
Sbjct: 2348 GARLSPGS 2355


>sp|P46101|DPP6_RAT Dipeptidyl aminopeptidase-like protein 6 OS=Rattus norvegicus
           GN=Dpp6 PE=1 SV=1
          Length = 859

 Score = 32.3 bits (72), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 20/129 (15%)

Query: 56  SPPHSHSSIGRHSRESSSSRFSGSLKPGSRKISPND-ASRGGQRKGQKRWNKECDVIEEE 114
           +PP +   +G    E  +   S  L P ++ ++P +    GG+ + Q +   +CD     
Sbjct: 20  APPEASHLLGGQGPEEDAG--SKPLGPQAQAVAPRERGGAGGRPRFQYQARSDCDE---- 73

Query: 115 GLLEDEERRSGLPRRCYFLAFVLGFFLLFSLFSLILWGA---------SKSQKPKITMKS 165
              EDE   S  P+R +     +   ++  + SLI+            S SQK K+T++ 
Sbjct: 74  ---EDELVGSNPPQRNW-KGIAIALLVILVICSLIVTSVILLTPAEDTSLSQKKKVTVED 129

Query: 166 INFEHFKIQ 174
           +  E FKI 
Sbjct: 130 LFSEDFKIH 138


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.315    0.130    0.379 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119,782,925
Number of Sequences: 539616
Number of extensions: 5170851
Number of successful extensions: 16728
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 16083
Number of HSP's gapped (non-prelim): 447
length of query: 322
length of database: 191,569,459
effective HSP length: 117
effective length of query: 205
effective length of database: 128,434,387
effective search space: 26329049335
effective search space used: 26329049335
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)