BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020688
(322 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2WOZ|A Chain A, The Novel Beta-Propeller Of The Btb-Kelch Protein Krp1
Provides The Binding Site For Lasp-1 That Is Necessary
For Pseudopodia Extension
Length = 318
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 26/216 (12%)
Query: 66 IPHVNATKIDRQRESVAV----IDKKGQDAERFLSATFADLPAPDLEWEQMPSAPVPRLD 121
IP +++ + +Q + V +D++ +D + L + F L EW +P P R
Sbjct: 45 IPRNHSSIVTQQNQVYVVGGLYVDEENKD--QPLQSYFFQLDNVSSEWVGLPPLPSARCL 102
Query: 122 GAAIQIKNLFYVFAGY-----GSLDYVHSHVDVYNFTDNKWVDRFDMP-KDMAHSHLGVV 175
++ + YV AG SLD V Y+ KW + ++P K H+ V+
Sbjct: 103 FGLGEVDDKIYVVAGKDLQTEASLDSVL----CYDPVAAKWSEVKNLPIKVYGHN---VI 155
Query: 176 SDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMG 235
S IY + G+ + T+R F+ + + W + P+ +PR + +G++ + G
Sbjct: 156 SHNGMIYCLGGKTDD--KKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAG 213
Query: 236 GSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPR 271
G E+ + +E + + + + TE P R
Sbjct: 214 GVTEDGLSASVEAFDLKTNKWEVM-----TEFPQER 244
Score = 35.0 bits (79), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 54/158 (34%), Gaps = 6/158 (3%)
Query: 79 ESVAVIDKKGQDAERFLSATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYG 138
+ + V+ K E L + P +W ++ + P+ I + Y G
Sbjct: 110 DKIYVVAGKDLQTEASLDSVLCYDPVA-AKWSEVKNLPIKVYGHNVISHNGMIYCLGGKT 168
Query: 139 SLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSR 198
+ V +YN W D P S GV I I G G ++
Sbjct: 169 DDKKCTNRVFIYNPKKGDWKDL--APMKTPRSMFGVAIHKGKIVIAGGVTE---DGLSAS 223
Query: 199 TFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGG 236
D +T KW+ + P R S + G L+ +GG
Sbjct: 224 VEAFDLKTNKWEVMTEFPQERSSISLVSLAGSLYAIGG 261
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 163 MPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGP---TSRTFVLDSETRKWDSIPPLPSPR 219
+ + + +H +V+ +Y+V G Y + S F LD+ + +W +PPLPS R
Sbjct: 41 LAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSAR 100
>pdb|2XN4|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl2
(mayven)
pdb|2XN4|B Chain B, Crystal Structure Of The Kelch Domain Of Human Klhl2
(mayven)
Length = 302
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 6/144 (4%)
Query: 108 EWEQMPSAPVPRLDGAAIQIKNLFYVFAGYG-SLDYVHSHVDVYNFTDNKWVDRFDMPKD 166
EW + R + L Y GY + S V+ YN T N+W +M
Sbjct: 135 EWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTR 194
Query: 167 MAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQL 226
+ + +GV+++ +Y V G GP R V D T W + + R +
Sbjct: 195 RSGAGVGVLNN--LLYAVGGHDGPLVRKSVE---VYDPTTNAWRQVADMNMCRRNAGVCA 249
Query: 227 WRGRLHVMGGSKENRHTPGLEHWS 250
G L+V+GG + + +E+++
Sbjct: 250 VNGLLYVVGGDDGSCNLASVEYYN 273
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 61/163 (37%), Gaps = 14/163 (8%)
Query: 103 PAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGY-GSLDYVHSHVDVYNFTDNKWVDRF 161
P D +W + + R A + L Y G+ GS S V+ YN N+W
Sbjct: 84 PVKD-QWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGL--SSVEAYNIKSNEWF--H 138
Query: 162 DMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYS 221
P + S +GV G +Y V G Y R S ++ T +W I + + R
Sbjct: 139 VAPMNTRRSSVGVGVVGGLLYAVGG-YDVASRQCLSTVECYNATTNEWTYIAEMSTRRSG 197
Query: 222 PATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWR 264
+ L+ +GG H L S+ V D AWR
Sbjct: 198 AGVGVLNNLLYAVGG-----HDGPLVRKSVEVYD--PTTNAWR 233
>pdb|2VPJ|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl12
Length = 301
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 6/142 (4%)
Query: 108 EWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDM 167
+W + R + + Y GY L+ ++S V+ Y+ W + M
Sbjct: 139 QWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNS-VEKYDPHTGHWTNVTPMATKR 197
Query: 168 AHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW 227
+ + + +++D +IY+V G G S + T W ++ + +PR +
Sbjct: 198 SGAGVALLND--HIYVVGGFDGTA---HLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL 252
Query: 228 RGRLHVMGGSKENRHTPGLEHW 249
RGRL+ + G N +E +
Sbjct: 253 RGRLYAIAGYDGNSLLSSIECY 274
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 70/190 (36%), Gaps = 19/190 (10%)
Query: 73 KIDRQRESVAVIDK-------KGQDA-ERFLSATFADLPA-PDLEWEQMPSAPVPRLDGA 123
I R+R VA + G D R S D A D W + V R
Sbjct: 48 SITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAG 107
Query: 124 AIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDM--AHSHLGVVSDGRYI 181
A + ++ YV G+ D H + + N +D++ M DM A G+V I
Sbjct: 108 ATTLGDMIYVSGGF---DGSRRHTSMERYDPN--IDQWSMLGDMQTAREGAGLVVASGVI 162
Query: 182 YIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENR 241
Y + G G + D T W ++ P+ + R L ++V+GG
Sbjct: 163 YCLGGYDGLNILNSVEK---YDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTA 219
Query: 242 HTPGLEHWSI 251
H +E ++I
Sbjct: 220 HLSSVEAYNI 229
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 58/153 (37%), Gaps = 16/153 (10%)
Query: 108 EWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFT---DNKWVDRFDMP 164
EW +PS R A++ + + YV GY + S V+ ++T D W P
Sbjct: 42 EWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRL-SSVECLDYTADEDGVWYSV--AP 98
Query: 165 KDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPAT 224
++ G + G IY+ G G + R D +W + + + R
Sbjct: 99 MNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMER---YDPNIDQWSMLGDMQTAREGAGL 155
Query: 225 QLWRGRLHVMGG-------SKENRHTPGLEHWS 250
+ G ++ +GG + ++ P HW+
Sbjct: 156 VVASGVIYCLGGYDGLNILNSVEKYDPHTGHWT 188
>pdb|4ASC|A Chain A, Crystal Structure Of The Kelch Domain Of Human Kbtbd5
Length = 315
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 6/159 (3%)
Query: 95 LSATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLD--YVHSHVDVYNF 152
+SA F D EW MP P PR + N YV G D V Y+
Sbjct: 65 MSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDR 124
Query: 153 TDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSI 212
KW + +P + + H V+S +Y++ G+ R ++ V D + +W +
Sbjct: 125 LSFKWGESDPLPY-VVYGHT-VLSHMDLVYVIGGKGSD--RKCLNKMCVYDPKKFEWKEL 180
Query: 213 PPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSI 251
P+ + R + GR+ V G + T E +SI
Sbjct: 181 APMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSI 219
Score = 32.0 bits (71), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 52/149 (34%), Gaps = 8/149 (5%)
Query: 89 QDAERFLSATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVD 148
+D ER L + +W + P + +L YV G GS + +
Sbjct: 110 KDGERCLDSVMC-YDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMC 168
Query: 149 VYNFTDNKWVDRFDMPKDMAHSHLG-VVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207
VY+ +W + P A S G V DGR I G G TS V
Sbjct: 169 VYDPKKFEWKEL--APMQTARSLFGATVHDGRIIVAA----GVTDTGLTSSAEVYSITDN 222
Query: 208 KWDSIPPLPSPRYSPATQLWRGRLHVMGG 236
KW P R S + G L+ +GG
Sbjct: 223 KWAPFEAFPQERSSLSLVSLVGTLYAIGG 251
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 66/165 (40%), Gaps = 15/165 (9%)
Query: 81 VAVIDKKGQDAERFLSATFADLPAPDLEWEQM-PSAPVPRLDGAAIQIKNLFYVFAGYGS 139
V VI KG D + D EW+++ P L GA + + V AG
Sbjct: 151 VYVIGGKGSDRKCLNKMCVYD--PKKFEWKELAPMQTARSLFGATVHDGRII-VAAGVTD 207
Query: 140 LDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSG------QYGPQCR 193
+ S +VY+ TDNKW P++ S L +VS +Y + G + G
Sbjct: 208 TG-LTSSAEVYSITDNKWAPFEAFPQE--RSSLSLVSLVGTLYAIGGFATLETESGELVP 264
Query: 194 GPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSK 238
+ + + E +KW+ + L Y+ RL+V+ +K
Sbjct: 265 TELNDIWRYNEEEKKWEGV--LREIAYAAGATFLPVRLNVLRLTK 307
>pdb|3VNG|A Chain A, Crystal Structure Of Keap1 In Complex With Synthetic Small
Molecular Based On A Co-crystallization
pdb|3VNH|A Chain A, Crystal Structure Of Keap1 Soaked With Synthetic Small
Molecular
Length = 309
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 5/134 (3%)
Query: 117 VPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176
VPR A ++ L Y GY S+++ YN +D W+ D+ + S L
Sbjct: 14 VPRGSHMAPKVGRLIYTAGGY--FRQSLSYLEAYNPSDGTWLRLADL--QVPRSGLAGCV 69
Query: 177 DGRYIYIVSGQYG-PQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMG 235
G +Y V G+ P +S + T +W P+ PR + G ++ +G
Sbjct: 70 VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVG 129
Query: 236 GSKENRHTPGLEHW 249
GS H +E +
Sbjct: 130 GSHGCIHHNSVERY 143
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 48/129 (37%), Gaps = 6/129 (4%)
Query: 108 EWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDM 167
EW + R+ + L Y G+ + ++S + Y N+W R +
Sbjct: 149 EWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNS-AECYYPERNEW--RMITAMNT 205
Query: 168 AHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW 227
S GV IY G G R D ET W + P+ R + +
Sbjct: 206 IRSGAGVCVLHNCIYAAGGYDGQDQLNSVER---YDVETETWTFVAPMKHRRSALGITVH 262
Query: 228 RGRLHVMGG 236
+GR++V+GG
Sbjct: 263 QGRIYVLGG 271
>pdb|1U6D|X Chain X, Crystal Structure Of The Kelch Domain Of Human Keap1
pdb|2FLU|X Chain X, Crystal Structure Of The Kelch-Neh2 Complex
Length = 308
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 6/134 (4%)
Query: 117 VPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176
VPR A ++ L Y GY S+++ YN +D W+ D+ + S L
Sbjct: 14 VPR-GSHAPKVGRLIYTAGGY--FRQSLSYLEAYNPSDGTWLRLADL--QVPRSGLAGCV 68
Query: 177 DGRYIYIVSGQYG-PQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMG 235
G +Y V G+ P +S + T +W P+ PR + G ++ +G
Sbjct: 69 VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVG 128
Query: 236 GSKENRHTPGLEHW 249
GS H +E +
Sbjct: 129 GSHGCIHHNSVERY 142
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 48/129 (37%), Gaps = 6/129 (4%)
Query: 108 EWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDM 167
EW + R+ + L Y G+ + ++S + Y N+W R +
Sbjct: 148 EWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNS-AECYYPERNEW--RMITAMNT 204
Query: 168 AHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW 227
S GV IY G G R D ET W + P+ R + +
Sbjct: 205 IRSGAGVCVLHNCIYAAGGYDGQDQLNSVER---YDVETETWTFVAPMKHRRSALGITVH 261
Query: 228 RGRLHVMGG 236
+GR++V+GG
Sbjct: 262 QGRIYVLGG 270
>pdb|4HEC|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Tuberculosis
pdb|4HEC|B Chain B, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Tuberculosis
pdb|4HVJ|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Tuberculosis In Complex With Amp
pdb|4HVJ|B Chain B, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Tuberculosis In Complex With Amp
Length = 190
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 172 LGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGR 230
+GVV+ DGR Y VS ++ P+ G RT VL P LP P A+QLWR R
Sbjct: 43 IGVVAEDGREYYAVSTEFDPERAGSWVRTHVL----------PKLPPP----ASQLWRSR 88
Query: 231 LHVMGGSKENRHTPG---LEHWS-IAVKDGKALEKAWRTEIPIP 270
+ +E G +E W+ + D AL + W +P
Sbjct: 89 QQIRLDLEEFLRIDGTDSIELWAWVGAYDHVALCQLWGPMTALP 132
>pdb|1ZGK|A Chain A, 1.35 Angstrom Structure Of The Kelch Domain Of Keap1
Length = 308
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 47/129 (36%), Gaps = 6/129 (4%)
Query: 108 EWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDM 167
EW + R+ + L Y G+ + ++S + Y N+W R +
Sbjct: 148 EWHLVAPXLTRRIGVGVAVLNRLLYAVGGFDGTNRLNS-AECYYPERNEW--RXITAXNT 204
Query: 168 AHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW 227
S GV IY G G R D ET W + P R + +
Sbjct: 205 IRSGAGVCVLHNCIYAAGGYDGQDQLNSVER---YDVETETWTFVAPXKHRRSALGITVH 261
Query: 228 RGRLHVMGG 236
+GR++V+GG
Sbjct: 262 QGRIYVLGG 270
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 53/134 (39%), Gaps = 6/134 (4%)
Query: 117 VPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176
VPR A ++ L Y GY S+++ YN ++ W+ D+ + S L
Sbjct: 14 VPR-GSHAPKVGRLIYTAGGY--FRQSLSYLEAYNPSNGTWLRLADL--QVPRSGLAGCV 68
Query: 177 DGRYIYIVSGQYG-PQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMG 235
G +Y V G+ P +S + T +W P PR + G ++ +G
Sbjct: 69 VGGLLYAVGGRNNSPDGNTDSSALDCYNPXTNQWSPCAPXSVPRNRIGVGVIDGHIYAVG 128
Query: 236 GSKENRHTPGLEHW 249
GS H +E +
Sbjct: 129 GSHGCIHHNSVERY 142
>pdb|3II7|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl7
Length = 306
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 53/140 (37%), Gaps = 16/140 (11%)
Query: 106 DLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFD--M 163
D W + R D A + N+ Y+ G S + +D YN + W +
Sbjct: 33 DYSWTDIRCPFEKRRDAACVFWDNVVYILGG--SQLFPIKRMDCYNVVKDSWYSKLGPPT 90
Query: 164 PKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVL---DSETRKWDSIPPLPSPRY 220
P+D S ++G+ IY G S ++ D+ T W + P + + R
Sbjct: 91 PRD---SLAACAAEGK-IYTSGGS-----EVGNSALYLFECYDTRTESWHTKPSMLTQRC 141
Query: 221 SPATQLWRGRLHVMGGSKEN 240
S G ++V GGS N
Sbjct: 142 SHGMVEANGLIYVCGGSLGN 161
>pdb|2DYH|A Chain A, Crystal Structure Of The Keap1 Protein In Complexed With
The N-Terminal Region Of The Nrf2 Transcription Factor
pdb|2Z32|A Chain A, Crystal Structure Of Keap1 Complexed With Prothymosin
Alpha
pdb|3ADE|A Chain A, Crystal Structure Of Keap1 In Complex With Sequestosome-
1P62
Length = 318
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 8/138 (5%)
Query: 113 PSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHL 172
P+ VP A ++ L Y GY S+++ YN ++ W+ D+ + S L
Sbjct: 6 PTQAVP---CRAPKVGRLIYTAGGY--FRQSLSYLEAYNPSNGSWLRLADL--QVPRSGL 58
Query: 173 GVVSDGRYIYIVSGQYG-PQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRL 231
G +Y V G+ P +S + T +W + PR + G +
Sbjct: 59 AGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCASMSVPRNRIGVGVIDGHI 118
Query: 232 HVMGGSKENRHTPGLEHW 249
+ +GGS H +E +
Sbjct: 119 YAVGGSHGCIHHSSVERY 136
>pdb|1X2J|A Chain A, Structural Basis For The Defects Of Human Lung Cancer
Somatic Mutations In The Repression Activity Of Keap1 On
Nrf2
pdb|1X2R|A Chain A, Structural Basis For The Defects Of Human Lung Cancer
Somatic Mutations In The Repression Activity Of Keap1 On
Nrf2
Length = 316
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 8/138 (5%)
Query: 113 PSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHL 172
P+ VP A ++ L Y GY S+++ YN ++ W+ D+ + S L
Sbjct: 5 PTQAVP---CRAPKVGRLIYTAGGY--FRQSLSYLEAYNPSNGSWLRLADL--QVPRSGL 57
Query: 173 GVVSDGRYIYIVSGQYG-PQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRL 231
G +Y V G+ P +S + T +W + PR + G +
Sbjct: 58 AGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCASMSVPRNRIGVGVIDGHI 117
Query: 232 HVMGGSKENRHTPGLEHW 249
+ +GGS H +E +
Sbjct: 118 YAVGGSHGCIHHSSVERY 135
>pdb|2XFS|A Chain A, Structural And Mechanistic Studies On A Cephalosporin
Esterase From The Clavulanic Acid Biosynthesis Pathway
pdb|2XFS|B Chain B, Structural And Mechanistic Studies On A Cephalosporin
Esterase From The Clavulanic Acid Biosynthesis Pathway
pdb|2XFT|A Chain A, Structural And Mechanistic Studies On A Cephalosporin
Esterase From The Clavulanic Acid Biosynthesis Pathway
pdb|2XFT|B Chain B, Structural And Mechanistic Studies On A Cephalosporin
Esterase From The Clavulanic Acid Biosynthesis Pathway
Length = 458
Score = 27.7 bits (60), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 238 KENRHTPGLEHWSIAVK---DGKALEKAWRTEIPIPRGGPHRFAGFPHVIYLSLVSSVE 293
+E HTPG++H AV+ DG + A E P+P G ++ + +LV+ +E
Sbjct: 135 EETLHTPGVQHSVYAVRLTPDGHEVLHASAPERPMPTGAAYKL-----YLMRALVAEIE 188
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.454
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,578,194
Number of Sequences: 62578
Number of extensions: 457660
Number of successful extensions: 758
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 728
Number of HSP's gapped (non-prelim): 29
length of query: 322
length of database: 14,973,337
effective HSP length: 99
effective length of query: 223
effective length of database: 8,778,115
effective search space: 1957519645
effective search space used: 1957519645
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)