Query 020688
Match_columns 322
No_of_seqs 235 out of 1559
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 06:44:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020688.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020688hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 1.4E-33 4.9E-38 258.0 19.9 192 97-302 90-285 (308)
2 4asc_A Kelch repeat and BTB do 100.0 1.1E-32 3.6E-37 252.8 20.1 185 95-291 65-253 (315)
3 3ii7_A Kelch-like protein 7; p 100.0 1.9E-32 6.4E-37 249.8 21.5 196 97-302 70-270 (306)
4 2xn4_A Kelch-like protein 2; s 100.0 4.1E-32 1.4E-36 247.1 23.4 194 97-302 77-274 (302)
5 2woz_A Kelch repeat and BTB do 100.0 3E-32 1E-36 250.1 22.3 185 96-292 77-264 (318)
6 2vpj_A Kelch-like protein 12; 100.0 9.8E-32 3.3E-36 244.3 24.0 238 50-302 30-276 (301)
7 3ii7_A Kelch-like protein 7; p 100.0 9.6E-32 3.3E-36 245.1 23.0 197 96-302 23-223 (306)
8 1zgk_A Kelch-like ECH-associat 100.0 1E-31 3.5E-36 245.6 22.2 192 98-302 40-238 (308)
9 4asc_A Kelch repeat and BTB do 100.0 2.4E-32 8.1E-37 250.5 15.8 231 53-291 69-307 (315)
10 2xn4_A Kelch-like protein 2; s 100.0 2.7E-31 9.1E-36 241.8 22.6 193 98-302 31-227 (302)
11 2vpj_A Kelch-like protein 12; 100.0 6.7E-31 2.3E-35 238.8 24.0 192 97-302 31-229 (301)
12 2woz_A Kelch repeat and BTB do 100.0 5.9E-31 2E-35 241.5 15.6 185 97-289 127-315 (318)
13 2uvk_A YJHT; unknown function, 100.0 3.8E-30 1.3E-34 239.5 17.2 188 98-291 32-262 (357)
14 2uvk_A YJHT; unknown function, 100.0 4.2E-29 1.4E-33 232.5 19.9 193 96-294 85-329 (357)
15 2zwa_A Leucine carboxyl methyl 100.0 1.2E-27 4E-32 242.2 19.6 192 97-302 412-633 (695)
16 2zwa_A Leucine carboxyl methyl 99.9 2.1E-25 7.1E-30 225.8 19.1 179 108-302 378-575 (695)
17 1k3i_A Galactose oxidase precu 99.9 1.9E-25 6.6E-30 224.6 17.2 205 98-305 266-550 (656)
18 1k3i_A Galactose oxidase precu 99.9 6E-23 2E-27 206.4 15.0 181 98-291 220-476 (656)
19 3mbr_X Glutamine cyclotransfer 97.4 0.0073 2.5E-07 52.6 16.1 101 120-236 22-122 (243)
20 3nol_A Glutamine cyclotransfer 97.3 0.0038 1.3E-07 54.9 12.7 99 122-236 46-144 (262)
21 3nok_A Glutaminyl cyclase; bet 96.8 0.021 7.2E-07 50.3 12.8 96 122-236 58-153 (268)
22 3dsm_A Uncharacterized protein 96.6 0.39 1.3E-05 42.8 20.5 162 97-289 17-190 (328)
23 2iwa_A Glutamine cyclotransfer 96.5 0.09 3.1E-06 46.3 15.2 99 122-236 24-124 (266)
24 3mbr_X Glutamine cyclotransfer 96.1 0.11 3.8E-06 45.0 13.1 103 168-289 20-122 (243)
25 3dsm_A Uncharacterized protein 95.9 0.56 1.9E-05 41.8 17.7 142 123-288 135-285 (328)
26 3q7m_A Lipoprotein YFGL, BAMB; 94.9 2 6.7E-05 38.5 19.1 134 123-287 48-194 (376)
27 3nol_A Glutamine cyclotransfer 94.8 0.2 6.8E-06 43.9 10.4 101 170-289 44-144 (262)
28 3q7m_A Lipoprotein YFGL, BAMB; 94.7 1.9 6.5E-05 38.6 17.2 134 122-288 97-246 (376)
29 2iwa_A Glutamine cyclotransfer 92.5 1.4 4.9E-05 38.5 11.7 100 171-289 23-124 (266)
30 3nok_A Glutaminyl cyclase; bet 91.1 1.2 4.2E-05 38.9 9.6 98 170-289 56-153 (268)
31 2hqs_A Protein TOLB; TOLB, PAL 91.1 2.7 9.1E-05 38.7 12.6 134 145-302 247-385 (415)
32 1l0q_A Surface layer protein; 89.8 2.4 8.4E-05 37.7 10.9 66 129-212 2-69 (391)
33 1l0q_A Surface layer protein; 89.6 3.1 0.00011 37.0 11.5 90 128-237 43-136 (391)
34 2hqs_A Protein TOLB; TOLB, PAL 89.1 9.1 0.00031 34.9 14.5 74 128-214 189-264 (415)
35 1kv9_A Type II quinohemoprotei 88.6 7.3 0.00025 38.4 14.2 122 123-265 61-194 (668)
36 3jrp_A Fusion protein of prote 88.6 11 0.00037 32.8 14.2 96 128-238 22-124 (379)
37 1kb0_A Quinohemoprotein alcoho 88.2 6.4 0.00022 39.0 13.5 123 123-266 72-207 (677)
38 3bws_A Protein LP49; two-domai 88.1 7.6 0.00026 35.0 13.1 98 98-209 102-203 (433)
39 2ad6_A Methanol dehydrogenase 87.2 7.7 0.00026 37.5 13.1 124 122-265 56-192 (571)
40 1yiq_A Quinohemoprotein alcoho 86.8 11 0.00036 37.4 14.1 122 123-265 65-199 (689)
41 3u4y_A Uncharacterized protein 85.6 11 0.00038 32.4 12.3 64 128-209 9-74 (331)
42 3bws_A Protein LP49; two-domai 84.7 13 0.00043 33.5 12.6 74 128-211 223-297 (433)
43 1jmx_B Amine dehydrogenase; ox 84.2 14 0.00047 31.8 12.3 68 128-211 10-79 (349)
44 1k8k_C P40, ARP2/3 complex 41 83.7 6.4 0.00022 34.4 9.9 105 128-252 19-126 (372)
45 3jrp_A Fusion protein of prote 83.5 8.4 0.00029 33.6 10.6 64 129-207 69-135 (379)
46 1rwi_B Serine/threonine-protei 82.6 19 0.00066 29.7 15.1 90 128-236 77-168 (270)
47 3c5m_A Oligogalacturonate lyas 82.1 7.9 0.00027 34.2 9.9 83 145-236 216-301 (396)
48 2ovr_B FBW7, F-BOX/WD repeat p 81.0 16 0.00056 33.1 12.0 94 125-238 125-218 (445)
49 3fm0_A Protein CIAO1; WDR39,SG 80.1 30 0.001 30.2 13.0 105 128-251 27-134 (345)
50 3jro_A Fusion protein of prote 79.8 14 0.00049 36.6 11.8 96 128-238 20-122 (753)
51 1gxr_A ESG1, transducin-like e 79.3 14 0.00048 31.4 10.3 93 128-237 108-203 (337)
52 1qhu_A Protein (hemopexin); be 79.2 26 0.0009 32.9 12.7 59 128-207 158-216 (460)
53 1p22_A F-BOX/WD-repeat protein 79.0 25 0.00085 31.8 12.5 95 124-238 138-232 (435)
54 1w6s_A Methanol dehydrogenase 78.1 24 0.00083 34.3 12.6 124 122-265 56-198 (599)
55 1rwi_B Serine/threonine-protei 77.3 29 0.001 28.6 14.7 91 128-236 118-210 (270)
56 3v7d_B Cell division control p 77.2 23 0.00079 32.1 11.7 90 128-236 321-410 (464)
57 1flg_A Protein (quinoprotein e 76.5 26 0.00089 33.8 12.2 74 123-212 63-144 (582)
58 1pex_A Collagenase-3, MMP-13; 76.3 32 0.0011 28.5 13.3 146 123-295 28-188 (207)
59 3dwl_C Actin-related protein 2 75.8 2.7 9.2E-05 37.2 4.6 96 128-238 22-121 (377)
60 2ojh_A Uncharacterized protein 75.4 17 0.0006 29.9 9.6 72 129-214 141-214 (297)
61 3vgz_A Uncharacterized protein 74.8 39 0.0013 28.9 16.0 82 145-236 206-291 (353)
62 1p22_A F-BOX/WD-repeat protein 74.2 25 0.00084 31.8 11.0 51 178-238 265-315 (435)
63 3vgz_A Uncharacterized protein 73.2 17 0.00058 31.3 9.2 57 145-212 253-309 (353)
64 1q7f_A NHL, brain tumor CG1071 73.0 40 0.0014 28.1 17.2 94 128-237 131-226 (286)
65 3jro_A Fusion protein of prote 72.5 15 0.00051 36.6 9.6 64 129-207 67-133 (753)
66 2xbg_A YCF48-like protein; pho 72.0 50 0.0017 28.8 15.6 114 106-236 24-140 (327)
67 1itv_A MMP9; adaptive molecula 71.6 40 0.0014 27.5 10.8 132 123-292 11-167 (195)
68 3ow8_A WD repeat-containing pr 71.0 37 0.0013 29.4 10.9 99 128-251 175-277 (321)
69 3azo_A Aminopeptidase; POP fam 70.4 76 0.0026 30.3 14.4 62 145-215 217-283 (662)
70 2dg1_A DRP35, lactonase; beta 70.3 50 0.0017 28.2 12.5 96 128-236 55-153 (333)
71 3ott_A Two-component system se 70.3 63 0.0021 31.8 13.6 92 128-236 482-576 (758)
72 2ojh_A Uncharacterized protein 70.1 44 0.0015 27.3 15.9 104 99-215 64-171 (297)
73 1qhu_A Protein (hemopexin); be 69.9 28 0.00097 32.7 10.3 96 122-237 191-322 (460)
74 3v9f_A Two-component system se 69.6 77 0.0026 31.3 14.2 98 99-213 429-531 (781)
75 1gxr_A ESG1, transducin-like e 69.3 36 0.0012 28.7 10.4 92 128-238 152-245 (337)
76 3v7d_B Cell division control p 68.9 66 0.0023 28.9 14.8 92 128-238 279-371 (464)
77 3g4e_A Regucalcin; six bladed 68.7 42 0.0014 28.5 10.7 166 98-289 74-261 (297)
78 4ery_A WD repeat-containing pr 67.8 49 0.0017 27.9 10.9 64 128-208 34-98 (312)
79 2z2n_A Virginiamycin B lyase; 66.4 55 0.0019 27.1 16.7 90 128-236 109-201 (299)
80 2ad6_A Methanol dehydrogenase 65.5 97 0.0033 29.6 17.5 80 123-212 110-193 (571)
81 3v9f_A Two-component system se 65.3 38 0.0013 33.6 10.8 90 128-236 505-601 (781)
82 2z3z_A Dipeptidyl aminopeptida 64.9 93 0.0032 29.9 13.5 80 128-214 268-352 (706)
83 3ow8_A WD repeat-containing pr 64.9 67 0.0023 27.6 11.4 92 128-238 133-227 (321)
84 4ery_A WD repeat-containing pr 64.4 59 0.002 27.4 10.8 92 128-238 76-170 (312)
85 3oyo_A Hemopexin fold protein 64.3 24 0.00081 29.7 7.8 102 177-292 69-191 (225)
86 3fm0_A Protein CIAO1; WDR39,SG 63.9 46 0.0016 28.9 10.2 104 128-251 72-179 (345)
87 1kb0_A Quinohemoprotein alcoho 63.0 48 0.0016 32.6 11.0 94 175-288 74-181 (677)
88 4g56_B MGC81050 protein; prote 62.9 41 0.0014 29.6 9.7 94 128-238 150-248 (357)
89 2dg1_A DRP35, lactonase; beta 62.3 18 0.00061 31.2 7.0 107 99-212 68-177 (333)
90 2pbi_B Guanine nucleotide-bind 61.8 81 0.0028 27.5 12.6 92 129-237 210-304 (354)
91 3scy_A Hypothetical bacterial 61.7 23 0.00079 30.9 7.7 99 131-235 15-116 (361)
92 3odt_A Protein DOA1; ubiquitin 61.1 61 0.0021 26.9 10.1 95 127-238 27-123 (313)
93 3dwl_C Actin-related protein 2 59.5 11 0.00036 33.2 5.0 123 101-238 37-167 (377)
94 2pm9_A Protein WEB1, protein t 59.5 76 0.0026 27.7 10.9 98 129-238 178-284 (416)
95 1hxn_A Hemopexin, HPX; heme, b 59.2 77 0.0026 26.4 12.1 57 127-205 27-89 (219)
96 3ju4_A Endo-N-acetylneuraminid 58.9 1.2E+02 0.004 28.4 20.0 129 106-237 269-406 (670)
97 3ott_A Two-component system se 58.7 1E+02 0.0036 30.2 12.7 87 128-235 527-615 (758)
98 3bg1_A Protein SEC13 homolog; 58.7 52 0.0018 28.2 9.4 104 128-251 24-134 (316)
99 4gqb_B Methylosome protein 50; 58.5 80 0.0027 27.6 10.8 94 128-238 138-236 (344)
100 3azo_A Aminopeptidase; POP fam 58.1 1.2E+02 0.004 28.9 12.7 89 144-237 160-261 (662)
101 3lrv_A PRE-mRNA-splicing facto 57.9 56 0.0019 28.2 9.5 65 128-208 138-203 (343)
102 3no2_A Uncharacterized protein 57.7 87 0.003 26.5 12.3 185 99-312 58-259 (276)
103 3e5z_A Putative gluconolactona 57.6 54 0.0018 27.6 9.2 88 128-234 39-131 (296)
104 4e54_B DNA damage-binding prot 57.4 85 0.0029 28.2 11.0 96 128-238 131-230 (435)
105 3o4h_A Acylamino-acid-releasin 57.3 32 0.0011 32.5 8.3 74 127-212 159-233 (582)
106 1kv9_A Type II quinohemoprotei 56.8 43 0.0015 32.8 9.3 104 99-212 78-195 (668)
107 1pex_A Collagenase-3, MMP-13; 56.8 47 0.0016 27.4 8.2 62 128-208 127-194 (207)
108 4a11_B DNA excision repair pro 55.9 30 0.001 30.2 7.5 71 128-212 55-137 (408)
109 1r5m_A SIR4-interacting protei 55.3 51 0.0018 28.8 9.0 67 128-208 160-238 (425)
110 1vyh_C Platelet-activating fac 54.9 66 0.0023 28.8 9.8 92 128-238 119-213 (410)
111 2pm7_B Protein transport prote 54.7 38 0.0013 28.7 7.7 71 128-213 20-93 (297)
112 2gop_A Trilobed protease; beta 54.6 1E+02 0.0034 26.3 10.7 61 144-214 199-259 (347)
113 1yiq_A Quinohemoprotein alcoho 54.1 81 0.0028 31.0 10.8 104 99-212 82-200 (689)
114 3sjl_D Methylamine dehydrogena 53.9 26 0.0009 32.1 6.7 72 128-211 291-368 (386)
115 2ynn_A Coatomer subunit beta'; 53.6 87 0.003 26.4 9.9 101 128-251 24-126 (304)
116 3no2_A Uncharacterized protein 53.1 1E+02 0.0035 26.0 11.0 130 128-290 47-184 (276)
117 4gga_A P55CDC, cell division c 52.8 1.1E+02 0.0036 27.3 10.8 83 145-238 125-208 (420)
118 1flg_A Protein (quinoprotein e 52.8 1.1E+02 0.0039 29.3 11.5 74 175-268 65-146 (582)
119 3mmy_A MRNA export factor; mRN 52.2 1.1E+02 0.0037 25.9 11.1 92 129-238 54-150 (368)
120 2p4o_A Hypothetical protein; p 52.0 71 0.0024 27.3 9.1 97 106-219 19-117 (306)
121 3mkq_A Coatomer beta'-subunit; 51.9 93 0.0032 30.3 11.0 63 128-207 66-129 (814)
122 2mad_H Methylamine dehydrogena 51.8 70 0.0024 28.6 9.3 70 128-209 278-353 (373)
123 3qhy_B Beta-lactamase inhibito 51.7 1.1E+02 0.0039 26.1 12.1 96 171-292 151-247 (282)
124 3ei3_B DNA damage-binding prot 51.4 1.2E+02 0.0041 26.2 12.5 92 129-238 131-226 (383)
125 3zwl_B Eukaryotic translation 51.3 1.1E+02 0.0038 25.8 11.5 68 128-212 43-111 (369)
126 3zwl_B Eukaryotic translation 50.5 1.1E+02 0.0038 25.9 10.2 67 128-211 186-254 (369)
127 2cn3_A Xyloglucanase, beta-1,4 50.2 99 0.0034 30.6 10.8 82 153-236 230-321 (737)
128 2z2n_A Virginiamycin B lyase; 49.9 1.1E+02 0.0036 25.2 15.2 89 128-235 151-242 (299)
129 3u4y_A Uncharacterized protein 49.9 29 0.00099 29.6 6.2 98 99-212 22-123 (331)
130 3g4e_A Regucalcin; six bladed 49.9 42 0.0014 28.6 7.2 66 128-214 24-90 (297)
131 4aez_A CDC20, WD repeat-contai 49.6 45 0.0015 29.6 7.6 106 128-251 271-378 (401)
132 1got_B GT-beta; complex (GTP-b 49.6 1.2E+02 0.0043 25.9 13.4 94 128-238 195-291 (340)
133 1pby_B Quinohemoprotein amine 49.6 1.1E+02 0.0039 25.4 12.2 56 145-210 11-69 (337)
134 2xbg_A YCF48-like protein; pho 49.4 1.3E+02 0.0044 26.1 15.3 112 106-235 65-180 (327)
135 1k8k_C P40, ARP2/3 complex 41 49.2 27 0.00092 30.2 5.9 62 178-252 19-82 (372)
136 1ri6_A Putative isomerase YBHE 48.9 33 0.0011 29.1 6.3 76 129-218 243-322 (343)
137 3hfq_A Uncharacterized protein 48.9 33 0.0011 29.6 6.4 61 146-214 19-80 (347)
138 4a2l_A BT_4663, two-component 47.8 1E+02 0.0035 30.5 10.6 66 128-212 462-531 (795)
139 2aq5_A Coronin-1A; WD40 repeat 47.7 1.4E+02 0.0049 26.1 12.5 152 128-303 93-253 (402)
140 1vyh_C Platelet-activating fac 47.7 1.3E+02 0.0044 26.8 10.5 65 128-209 161-226 (410)
141 3c5m_A Oligogalacturonate lyas 47.3 70 0.0024 27.7 8.4 64 145-214 168-233 (396)
142 1w6s_A Methanol dehydrogenase 47.3 97 0.0033 30.0 10.0 75 145-234 453-532 (599)
143 3pe7_A Oligogalacturonate lyas 46.7 1.4E+02 0.0049 25.7 10.6 67 144-216 215-283 (388)
144 3ei3_B DNA damage-binding prot 46.6 1.4E+02 0.0049 25.7 14.1 94 130-238 87-184 (383)
145 4e54_B DNA damage-binding prot 46.1 72 0.0024 28.7 8.5 93 128-238 176-272 (435)
146 2pm9_A Protein WEB1, protein t 45.3 1.4E+02 0.0048 25.9 10.2 66 128-208 78-147 (416)
147 3hfq_A Uncharacterized protein 45.0 18 0.00062 31.3 4.1 65 128-205 50-116 (347)
148 1got_B GT-beta; complex (GTP-b 44.8 1.5E+02 0.0051 25.4 12.6 80 146-238 165-247 (340)
149 2qc5_A Streptogramin B lactona 44.3 1.3E+02 0.0045 24.6 15.8 90 128-236 30-122 (300)
150 1su3_A Interstitial collagenas 43.9 93 0.0032 29.0 8.9 135 123-295 267-428 (450)
151 2z3z_A Dipeptidyl aminopeptida 43.6 1.1E+02 0.0037 29.5 9.8 76 128-213 322-398 (706)
152 3bg1_A Protein SEC13 homolog; 43.4 1E+02 0.0034 26.3 8.7 69 129-212 71-143 (316)
153 4a2l_A BT_4663, two-component 43.3 1.6E+02 0.0053 29.1 11.1 58 146-213 428-487 (795)
154 1pjx_A Dfpase, DIISOPROPYLFLUO 43.1 1E+02 0.0035 25.7 8.6 99 128-236 28-135 (314)
155 1q7f_A NHL, brain tumor CG1071 43.0 1.4E+02 0.0048 24.6 15.4 93 128-236 88-182 (286)
156 3mkq_A Coatomer beta'-subunit; 42.0 1.7E+02 0.0059 28.3 11.1 67 128-211 24-91 (814)
157 2ghs_A AGR_C_1268P; regucalcin 41.9 1.5E+02 0.0051 25.4 9.7 67 128-214 60-126 (326)
158 3sfz_A APAF-1, apoptotic pepti 41.7 1.3E+02 0.0045 31.2 10.6 93 128-238 1014-1106(1249)
159 2ynn_A Coatomer subunit beta'; 41.4 92 0.0031 26.3 8.1 92 129-238 153-249 (304)
160 4g56_B MGC81050 protein; prote 40.9 74 0.0025 27.9 7.5 99 128-251 238-341 (357)
161 3sfz_A APAF-1, apoptotic pepti 39.6 1.7E+02 0.0058 30.3 11.1 66 128-210 626-692 (1249)
162 2hes_X YDR267CP; beta-propelle 38.8 1.8E+02 0.0062 24.7 9.9 105 128-252 118-229 (330)
163 1itv_A MMP9; adaptive molecula 38.7 1E+02 0.0034 25.1 7.4 62 128-208 109-176 (195)
164 2ovr_B FBW7, F-BOX/WD repeat p 38.5 2.1E+02 0.0072 25.4 18.9 95 126-238 286-381 (445)
165 3vl1_A 26S proteasome regulato 38.1 1.8E+02 0.0062 25.3 9.8 124 145-291 78-202 (420)
166 3hxj_A Pyrrolo-quinoline quino 36.3 1.9E+02 0.0065 24.2 10.1 86 126-235 105-194 (330)
167 3hxj_A Pyrrolo-quinoline quino 36.2 1.5E+02 0.0051 24.8 8.6 81 128-234 70-153 (330)
168 4gga_A P55CDC, cell division c 36.2 1.7E+02 0.0057 25.9 9.3 50 197-251 125-176 (420)
169 1sq9_A Antiviral protein SKI8; 36.0 2.1E+02 0.0071 24.6 11.5 69 128-208 197-269 (397)
170 2cn3_A Xyloglucanase, beta-1,4 35.2 3.3E+02 0.011 26.7 12.9 82 106-187 231-322 (737)
171 2qc5_A Streptogramin B lactona 35.0 1.8E+02 0.0063 23.6 15.4 89 128-235 72-163 (300)
172 3k26_A Polycomb protein EED; W 33.9 1.4E+02 0.0049 25.1 8.2 93 129-238 85-182 (366)
173 2fp8_A Strictosidine synthase; 33.9 2.2E+02 0.0074 24.1 9.9 125 145-288 165-300 (322)
174 1r5m_A SIR4-interacting protei 33.4 2.3E+02 0.0079 24.3 12.8 66 128-211 119-185 (425)
175 1jmx_B Amine dehydrogenase; ox 33.3 1.5E+02 0.005 24.9 8.1 52 177-236 9-62 (349)
176 4aez_A CDC20, WD repeat-contai 33.2 2.5E+02 0.0084 24.5 16.6 82 145-238 113-195 (401)
177 3iz6_a 40S ribosomal protein R 33.2 2.2E+02 0.0076 24.7 9.5 135 128-291 217-365 (380)
178 1hxn_A Hemopexin, HPX; heme, b 32.9 2.1E+02 0.0072 23.7 11.8 95 123-237 67-188 (219)
179 1erj_A Transcriptional repress 32.8 2E+02 0.0068 25.2 9.1 25 178-210 134-158 (393)
180 1erj_A Transcriptional repress 32.8 98 0.0034 27.3 7.0 66 128-210 134-200 (393)
181 4h5i_A Guanine nucleotide-exch 32.5 2.5E+02 0.0085 24.4 11.6 129 146-292 198-334 (365)
182 1ri6_A Putative isomerase YBHE 32.2 1.1E+02 0.0039 25.5 7.2 71 129-215 5-80 (343)
183 2vdu_B TRNA (guanine-N(7)-)-me 31.7 2.8E+02 0.0095 24.7 11.6 135 128-291 114-261 (450)
184 4ggc_A P55CDC, cell division c 31.6 1.3E+02 0.0043 24.9 7.3 90 146-251 222-313 (318)
185 3i2n_A WD repeat-containing pr 30.4 2.4E+02 0.0082 23.6 15.6 22 129-156 80-101 (357)
186 3f3f_A Nucleoporin SEH1; struc 30.2 1.1E+02 0.0038 25.4 6.7 65 128-207 22-91 (351)
187 1yr2_A Prolyl oligopeptidase; 30.0 3.3E+02 0.011 26.4 10.9 84 144-236 293-381 (741)
188 1gen_A Gelatinase A; hydrolase 29.5 2.4E+02 0.0081 23.2 11.8 90 128-237 87-193 (218)
189 1pgu_A Actin interacting prote 29.3 3.3E+02 0.011 24.9 15.3 100 129-251 456-570 (615)
190 3ba0_A Macrophage metalloelast 29.2 2.1E+02 0.0071 25.7 8.5 65 128-211 284-355 (365)
191 3a0f_A Xyloglucanase; beta-pro 28.9 4.3E+02 0.015 26.0 14.6 106 106-217 164-295 (763)
192 3qhy_B Beta-lactamase inhibito 28.8 2.7E+02 0.0092 23.6 12.1 19 170-188 72-90 (282)
193 4fj6_A Glycoside hydrolase fam 28.5 3.8E+02 0.013 25.3 17.5 130 147-287 354-502 (523)
194 2hes_X YDR267CP; beta-propelle 27.5 98 0.0033 26.5 5.9 66 173-251 255-326 (330)
195 3oyo_A Hemopexin fold protein 27.2 2.5E+02 0.0085 23.2 8.1 60 128-205 127-197 (225)
196 4ggc_A P55CDC, cell division c 26.9 1.6E+02 0.0055 24.3 7.1 56 145-209 45-101 (318)
197 1su3_A Interstitial collagenas 26.2 1.7E+02 0.0058 27.2 7.5 63 128-209 367-435 (450)
198 1gen_A Gelatinase A; hydrolase 26.0 2.7E+02 0.0094 22.8 12.0 146 123-295 35-198 (218)
199 3j1r_A Archaeal adhesion filam 25.2 71 0.0024 16.9 2.6 19 20-38 5-26 (26)
200 3c7x_A Matrix metalloproteinas 25.0 2.4E+02 0.0082 22.7 7.4 62 128-208 109-177 (196)
201 3pe7_A Oligogalacturonate lyas 24.8 3.3E+02 0.011 23.3 9.0 64 146-213 265-336 (388)
202 2xdw_A Prolyl endopeptidase; a 24.4 4.8E+02 0.016 25.0 16.8 86 144-237 258-355 (710)
203 2pbi_B Guanine nucleotide-bind 24.2 3E+02 0.01 23.6 8.7 65 128-208 251-317 (354)
204 1qks_A Cytochrome CD1 nitrite 24.1 1.6E+02 0.0054 28.2 7.1 59 128-205 166-226 (567)
205 4gqb_B Methylosome protein 50; 23.9 95 0.0033 27.1 5.2 99 128-251 226-329 (344)
206 2xdw_A Prolyl endopeptidase; a 23.9 4.9E+02 0.017 25.0 12.8 32 128-160 135-166 (710)
207 1pgu_A Actin interacting prote 23.7 4.2E+02 0.014 24.2 13.2 101 128-251 499-612 (615)
208 4aow_A Guanine nucleotide-bind 23.6 3.1E+02 0.011 22.6 10.3 50 179-238 185-236 (340)
209 2mad_H Methylamine dehydrogena 23.5 3.8E+02 0.013 23.6 10.9 75 129-208 33-108 (373)
210 3frx_A Guanine nucleotide-bind 22.8 3.4E+02 0.012 22.8 9.8 63 128-208 76-140 (319)
211 3scy_A Hypothetical bacterial 22.4 2.1E+02 0.0073 24.4 7.2 97 100-206 32-129 (361)
212 1npe_A Nidogen, entactin; glyc 21.9 3.2E+02 0.011 22.2 16.5 91 128-236 47-141 (267)
213 1sq9_A Antiviral protein SKI8; 21.7 3.7E+02 0.013 22.8 15.5 105 125-252 22-156 (397)
214 1yfq_A Cell cycle arrest prote 21.5 3.5E+02 0.012 22.4 11.5 90 128-237 22-120 (342)
215 3lp9_A LS-24; SEED albumin, pl 21.0 2E+02 0.007 23.8 6.4 62 128-207 129-202 (227)
216 3b7f_A Glycosyl hydrolase, BNR 20.9 4.2E+02 0.015 23.1 11.3 90 129-235 190-297 (394)
217 1pby_B Quinohemoprotein amine 20.8 2.4E+02 0.0082 23.3 7.0 51 145-208 260-312 (337)
218 2bkl_A Prolyl endopeptidase; m 20.4 3.3E+02 0.011 26.1 8.7 84 144-236 251-337 (695)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.4e-33 Score=257.99 Aligned_cols=192 Identities=16% Similarity=0.185 Sum_probs=165.2
Q ss_pred hhhhccCCCCCCEEEcCCCCCCcccceEEEECCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE
Q 020688 97 ATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176 (322)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~p~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~ 176 (322)
..++.||+.+++|++++++|.+|..|++++++++|||+||.+... .++++++||+.+++|+.++++|. +|..|++++
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~ 166 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCI-HHNSVERYEPERDEWHLVAPMLT--RRIGVGVAV 166 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTE-ECCCEEEEETTTTEEEECCCCSS--CCBSCEEEE
T ss_pred ceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCc-ccccEEEECCCCCeEeECCCCCc--cccceEEEE
Confidence 446678888999999999999999999999999999999986644 46789999999999999999987 899999999
Q ss_pred eCCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCeEEEECCEEEEEccCCCCCCCCCcceeEeEEecc
Q 020688 177 DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDG 256 (322)
Q Consensus 177 ~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~ 256 (322)
++++|||+||.++... .+++++||+.+++|+.++++|.+|..+++++++++|||+||.++....+ ++++||+
T Consensus 167 ~~~~iyv~GG~~~~~~---~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~-----~v~~yd~ 238 (308)
T 1zgk_A 167 LNRLLYAVGGFDGTNR---LNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLN-----SVERYDV 238 (308)
T ss_dssp ETTEEEEECCBCSSCB---CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCC-----CEEEEET
T ss_pred ECCEEEEEeCCCCCCc---CceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccc-----eEEEEeC
Confidence 9999999999987664 7899999999999999999999999999999999999999987654333 5668887
Q ss_pred cccccccccc--cCCCCCcceEEEEeCCEEEEEccccCCC--CceEEeec
Q 020688 257 KALEKAWRTE--IPIPRGGPHRFAGFPHVIYLSLVSSVED--LNFYVIQV 302 (322)
Q Consensus 257 ~~~~~~W~~~--~p~pr~~~~~~~v~~~~iyi~GG~~~e~--~~~~~~q~ 302 (322)
. +++|+.. +|.+|.+ |++++++++||++||.+... .+++.+.+
T Consensus 239 ~--~~~W~~~~~~p~~r~~-~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 285 (308)
T 1zgk_A 239 E--TETWTFVAPMKHRRSA-LGITVHQGRIYVLGGYDGHTFLDSVECYDP 285 (308)
T ss_dssp T--TTEEEECCCCSSCCBS-CEEEEETTEEEEECCBCSSCBCCEEEEEET
T ss_pred C--CCcEEECCCCCCCccc-eEEEEECCEEEEEcCcCCCcccceEEEEcC
Confidence 6 9999986 4556888 79999999999999976443 34445444
No 2
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.1e-32 Score=252.84 Aligned_cols=185 Identities=21% Similarity=0.293 Sum_probs=160.9
Q ss_pred hhhhhhccCCCCCCEEEcCCCCCCcccceEEEECCEEEEEeecC--CCCCccceEEEEECCCCceeeCCCCCCCCCceee
Q 020688 95 LSATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYG--SLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHL 172 (322)
Q Consensus 95 ~~~~~~~~~~~~~~W~~~~~~p~~R~~~~~~~~~~~lyv~GG~~--~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~ 172 (322)
..+.++.||+.+++|++++++|.+|..|++++++++|||+||.+ ......+++++||+.+++|+.++++|. +|..|
T Consensus 65 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~ 142 (315)
T 4asc_A 65 MSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPY--VVYGH 142 (315)
T ss_dssp EEEEEEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSS--CCBSC
T ss_pred cccceEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCC--cccce
Confidence 44446778898999999999999999999999999999999975 234457889999999999999999987 89999
Q ss_pred EEEEeCCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCeEEEECCEEEEEccCCCCCCCCCcceeEeE
Q 020688 173 GVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIA 252 (322)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~~i~ 252 (322)
++++++++|||+||...... ..+++++||+.+++|++++++|.+|..|++++++++|||+||.+.... .-+++
T Consensus 143 ~~~~~~~~iyv~GG~~~~~~--~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~-----~~~~~ 215 (315)
T 4asc_A 143 TVLSHMDLVYVIGGKGSDRK--CLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGL-----TSSAE 215 (315)
T ss_dssp EEEEETTEEEEECCBCTTSC--BCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSE-----EEEEE
T ss_pred eEEEECCEEEEEeCCCCCCc--ccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCc-----cceEE
Confidence 99999999999999843332 278999999999999999999999999999999999999999865432 23678
Q ss_pred Eeccccccccccccc--CCCCCcceEEEEeCCEEEEEcccc
Q 020688 253 VKDGKALEKAWRTEI--PIPRGGPHRFAGFPHVIYLSLVSS 291 (322)
Q Consensus 253 ~yd~~~~~~~W~~~~--p~pr~~~~~~~v~~~~iyi~GG~~ 291 (322)
+||+. +++|+... |.||.+ |++++++++||++||.+
T Consensus 216 ~yd~~--~~~W~~~~~~p~~r~~-~~~~~~~~~l~v~GG~~ 253 (315)
T 4asc_A 216 VYSIT--DNKWAPFEAFPQERSS-LSLVSLVGTLYAIGGFA 253 (315)
T ss_dssp EEETT--TTEEEEECCCSSCCBS-CEEEEETTEEEEEEEEE
T ss_pred EEECC--CCeEEECCCCCCcccc-eeEEEECCEEEEECCcc
Confidence 89986 99999865 556888 79999999999999975
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.9e-32 Score=249.84 Aligned_cols=196 Identities=16% Similarity=0.218 Sum_probs=164.8
Q ss_pred hhhhccCCCCCCEEEcCCCCCCcccceEEEECCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE
Q 020688 97 ATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176 (322)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~p~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~ 176 (322)
..++.||+.+++|+.++++|.+|..|++++++++|||+||.+.....++++++||+.+++|+.++++|. +|..|++++
T Consensus 70 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~ 147 (306)
T 3ii7_A 70 KRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLT--QRCSHGMVE 147 (306)
T ss_dssp CEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSS--CCBSCEEEE
T ss_pred ceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcC--CcceeEEEE
Confidence 445678888999999999999999999999999999999987555557889999999999999999987 899999999
Q ss_pred eCCEEEEEecccCCCCC-CCCceEEEEECCCCcEEecCCCCCCCCCCeEEEECCEEEEEccCCCCCCCCCcceeEeEEec
Q 020688 177 DGRYIYIVSGQYGPQCR-GPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKD 255 (322)
Q Consensus 177 ~~~~iyv~GG~~~~~~~-~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~~i~~yd 255 (322)
++++|||+||..+.... ...+++++||+.+++|+.++++|.+|..|++++++++||++||.+.....+ ++++||
T Consensus 148 ~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~-----~~~~yd 222 (306)
T 3ii7_A 148 ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLD-----NVEYYD 222 (306)
T ss_dssp ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBC-----CEEEEE
T ss_pred ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCc-----eEEEee
Confidence 99999999998765431 115789999999999999999999999999999999999999986543322 567888
Q ss_pred cccccccccccc--CCCCCcceEEEEeCCEEEEEccccCC--CCceEEeec
Q 020688 256 GKALEKAWRTEI--PIPRGGPHRFAGFPHVIYLSLVSSVE--DLNFYVIQV 302 (322)
Q Consensus 256 ~~~~~~~W~~~~--p~pr~~~~~~~v~~~~iyi~GG~~~e--~~~~~~~q~ 302 (322)
+. +++|+... |.+|.+ |++++++++|||+||.+.. ..+++.+.+
T Consensus 223 ~~--~~~W~~~~~~p~~r~~-~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~ 270 (306)
T 3ii7_A 223 IK--LNEWKMVSPMPWKGVT-VKCAAVGSIVYVLAGFQGVGRLGHILEYNT 270 (306)
T ss_dssp TT--TTEEEECCCCSCCBSC-CEEEEETTEEEEEECBCSSSBCCEEEEEET
T ss_pred CC--CCcEEECCCCCCCccc-eeEEEECCEEEEEeCcCCCeeeeeEEEEcC
Confidence 86 99999865 446888 7999999999999996543 234444444
No 4
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.1e-32 Score=247.11 Aligned_cols=194 Identities=19% Similarity=0.259 Sum_probs=164.8
Q ss_pred hhhhccCCCCCCEEEcCCCCCCcccceEEEECCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE
Q 020688 97 ATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176 (322)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~p~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~ 176 (322)
..++.||+.+++|++++++|.+|..|++++++++|||+||.+... .++++++||+.+++|+.++++|. +|..|++++
T Consensus 77 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~ 153 (302)
T 2xn4_A 77 RTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGST-GLSSVEAYNIKSNEWFHVAPMNT--RRSSVGVGV 153 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSC-EEEEEEEEETTTTEEEEECCCSS--CCBSCEEEE
T ss_pred cceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCc-cCceEEEEeCCCCeEeecCCCCC--cccCceEEE
Confidence 345678888999999999999999999999999999999987654 47889999999999999999987 899999999
Q ss_pred eCCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCeEEEECCEEEEEccCCCCCCCCCcceeEeEEecc
Q 020688 177 DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDG 256 (322)
Q Consensus 177 ~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~ 256 (322)
++++|||+||.++... ...+++++||+.+++|+.++++|.+|..|++++++++||++||.++....+ ++++||+
T Consensus 154 ~~~~iyv~GG~~~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~-----~~~~yd~ 227 (302)
T 2xn4_A 154 VGGLLYAVGGYDVASR-QCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRK-----SVEVYDP 227 (302)
T ss_dssp ETTEEEEECCEETTTT-EECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCC-----CEEEEET
T ss_pred ECCEEEEEeCCCCCCC-ccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccc-----eEEEEeC
Confidence 9999999999876541 126789999999999999999999999999999999999999987654333 4668887
Q ss_pred ccccccccccc--CCCCCcceEEEEeCCEEEEEccccCC--CCceEEeec
Q 020688 257 KALEKAWRTEI--PIPRGGPHRFAGFPHVIYLSLVSSVE--DLNFYVIQV 302 (322)
Q Consensus 257 ~~~~~~W~~~~--p~pr~~~~~~~v~~~~iyi~GG~~~e--~~~~~~~q~ 302 (322)
. +++|+... |.+|.+ |++++++++||++||.+.. ..+++.+.+
T Consensus 228 ~--~~~W~~~~~~~~~r~~-~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 228 T--TNAWRQVADMNMCRRN-AGVCAVNGLLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp T--TTEEEEECCCSSCCBS-CEEEEETTEEEEECCBCSSSBCCCEEEEET
T ss_pred C--CCCEeeCCCCCCcccc-CeEEEECCEEEEECCcCCCcccccEEEEcC
Confidence 6 99999764 456888 7999999999999997643 234555544
No 5
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=3e-32 Score=250.15 Aligned_cols=185 Identities=21% Similarity=0.364 Sum_probs=160.8
Q ss_pred hhhhhccCCCCCCEEEcCCCCCCcccceEEEECCEEEEEeecCC-CCCccceEEEEECCCCceeeCCCCCCCCCceeeEE
Q 020688 96 SATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGS-LDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGV 174 (322)
Q Consensus 96 ~~~~~~~~~~~~~W~~~~~~p~~R~~~~~~~~~~~lyv~GG~~~-~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~ 174 (322)
...++.||+.+++|++++++|.+|..|++++++++|||+||.+. ....++++++||+.+++|+.++++|. +|..|++
T Consensus 77 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~ 154 (318)
T 2woz_A 77 QSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPI--KVYGHNV 154 (318)
T ss_dssp CBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSS--CEESCEE
T ss_pred cccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCC--cccccEE
Confidence 33467788889999999999999999999999999999999863 44567889999999999999999987 8999999
Q ss_pred EEeCCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCeEEEECCEEEEEccCCCCCCCCCcceeEeEEe
Q 020688 175 VSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVK 254 (322)
Q Consensus 175 ~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~~i~~y 254 (322)
++++++|||+||...... ..+++++||+.+++|++++++|.+|..|++++++++|||+||.+... ..-++++|
T Consensus 155 ~~~~~~iyv~GG~~~~~~--~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-----~~~~~~~y 227 (318)
T 2woz_A 155 ISHNGMIYCLGGKTDDKK--CTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDG-----LSASVEAF 227 (318)
T ss_dssp EEETTEEEEECCEESSSC--BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTE-----EEEEEEEE
T ss_pred EEECCEEEEEcCCCCCCC--ccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCC-----ccceEEEE
Confidence 999999999999864432 26899999999999999999999999999999999999999976432 23367889
Q ss_pred ccccccccccccc--CCCCCcceEEEEeCCEEEEEccccC
Q 020688 255 DGKALEKAWRTEI--PIPRGGPHRFAGFPHVIYLSLVSSV 292 (322)
Q Consensus 255 d~~~~~~~W~~~~--p~pr~~~~~~~v~~~~iyi~GG~~~ 292 (322)
|+. +++|+... |.+|.. |++++++++||++||.+.
T Consensus 228 d~~--~~~W~~~~~~p~~r~~-~~~~~~~~~i~v~GG~~~ 264 (318)
T 2woz_A 228 DLK--TNKWEVMTEFPQERSS-ISLVSLAGSLYAIGGFAM 264 (318)
T ss_dssp ETT--TCCEEECCCCSSCCBS-CEEEEETTEEEEECCBCC
T ss_pred ECC--CCeEEECCCCCCcccc-eEEEEECCEEEEECCeec
Confidence 986 99999864 456888 799999999999999753
No 6
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=9.8e-32 Score=244.34 Aligned_cols=238 Identities=17% Similarity=0.246 Sum_probs=181.6
Q ss_pred ccccccceeccCceeecCCcccchhhh--hhhhhhhhcccCCChhhhhhhhhhccCCCCCC---EEEcCCCCCCcccceE
Q 020688 50 LSVASNWALEKSGVVVIPHVNATKIDR--QRESVAVIDKKGQDAERFLSATFADLPAPDLE---WEQMPSAPVPRLDGAA 124 (322)
Q Consensus 50 ~~~~s~~~~~~~~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---W~~~~~~p~~R~~~~~ 124 (322)
++....+++.++.|..++.....+... .......-...+..... ....++.||+.+++ |++++++|.+|..|++
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~-~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~ 108 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRS-RLSSVECLDYTADEDGVWYSVAPMNVRRGLAGA 108 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSC-BCCCEEEEETTCCTTCCCEEECCCSSCCBSCEE
T ss_pred eeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCc-cCceEEEEECCCCCCCeeEECCCCCCCccceeE
Confidence 334455566677777766542211110 00011111112222222 33446678888899 9999999999999999
Q ss_pred EEECCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEEC
Q 020688 125 IQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (322)
Q Consensus 125 ~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~ 204 (322)
++++++|||+||.+.... ++++++||+.+++|+.++++|. +|..|++++++++||++||.++... .+++++||+
T Consensus 109 ~~~~~~lyv~GG~~~~~~-~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~---~~~~~~~d~ 182 (301)
T 2vpj_A 109 TTLGDMIYVSGGFDGSRR-HTSMERYDPNIDQWSMLGDMQT--AREGAGLVVASGVIYCLGGYDGLNI---LNSVEKYDP 182 (301)
T ss_dssp EEETTEEEEECCBCSSCB-CCEEEEEETTTTEEEEEEECSS--CCBSCEEEEETTEEEEECCBCSSCB---CCCEEEEET
T ss_pred EEECCEEEEEcccCCCcc-cceEEEEcCCCCeEEECCCCCC--CcccceEEEECCEEEEECCCCCCcc---cceEEEEeC
Confidence 999999999999876554 7889999999999999999987 8999999999999999999877654 789999999
Q ss_pred CCCcEEecCCCCCCCCCCeEEEECCEEEEEccCCCCCCCCCcceeEeEEeccccccccccccc--CCCCCcceEEEEeCC
Q 020688 205 ETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEI--PIPRGGPHRFAGFPH 282 (322)
Q Consensus 205 ~t~~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~~~~~~W~~~~--p~pr~~~~~~~v~~~ 282 (322)
.+++|+.++++|.+|..+++++++++||++||.++....+ ++++||+. +++|+... |.+|.. |+++++++
T Consensus 183 ~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~-----~v~~yd~~--~~~W~~~~~~p~~r~~-~~~~~~~~ 254 (301)
T 2vpj_A 183 HTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLS-----SVEAYNIR--TDSWTTVTSMTTPRCY-VGATVLRG 254 (301)
T ss_dssp TTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCC-----CEEEEETT--TTEEEEECCCSSCCBS-CEEEEETT
T ss_pred CCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccc-----eEEEEeCC--CCcEEECCCCCCcccc-eeEEEECC
Confidence 9999999999999999999999999999999987654333 46678876 99999864 556888 79999999
Q ss_pred EEEEEccccCCC--CceEEeec
Q 020688 283 VIYLSLVSSVED--LNFYVIQV 302 (322)
Q Consensus 283 ~iyi~GG~~~e~--~~~~~~q~ 302 (322)
+||++||.+... .+++.+.+
T Consensus 255 ~i~v~GG~~~~~~~~~v~~yd~ 276 (301)
T 2vpj_A 255 RLYAIAGYDGNSLLSSIECYDP 276 (301)
T ss_dssp EEEEECCBCSSSBEEEEEEEET
T ss_pred EEEEEcCcCCCcccccEEEEcC
Confidence 999999976443 24444443
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=9.6e-32 Score=245.14 Aligned_cols=197 Identities=19% Similarity=0.252 Sum_probs=163.9
Q ss_pred hhhhhccCCCCCCEEEcCCCCCCcccceEEEECCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEE
Q 020688 96 SATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVV 175 (322)
Q Consensus 96 ~~~~~~~~~~~~~W~~~~~~p~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~ 175 (322)
...++.||+.+++|++++++|.+|..|++++++++|||+||.+ ....+++++||+.+++|+.++++|. +|..|+++
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~ 98 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ--LFPIKRMDCYNVVKDSWYSKLGPPT--PRDSLAAC 98 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS--SSBCCEEEEEETTTTEEEEEECCSS--CCBSCEEE
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC--CCCcceEEEEeCCCCeEEECCCCCc--cccceeEE
Confidence 3446678888999999999999999999999999999999987 4457889999999999999999987 89999999
Q ss_pred EeCCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCeEEEECCEEEEEccCCCCCCCCCcceeEeEEec
Q 020688 176 SDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKD 255 (322)
Q Consensus 176 ~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~~i~~yd 255 (322)
+++++|||+||.+.... ..+++++||+.+++|++++++|.+|..|++++++++||++||....... ....-++++||
T Consensus 99 ~~~~~iyv~GG~~~~~~--~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~-~~~~~~~~~yd 175 (306)
T 3ii7_A 99 AAEGKIYTSGGSEVGNS--ALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVS-GRVLNSCEVYD 175 (306)
T ss_dssp EETTEEEEECCBBTTBS--CCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTT-CEECCCEEEEE
T ss_pred EECCEEEEECCCCCCCc--EeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCc-ccccceEEEeC
Confidence 99999999999873222 2789999999999999999999999999999999999999998654331 01122567888
Q ss_pred cccccccccccc--CCCCCcceEEEEeCCEEEEEccccCC--CCceEEeec
Q 020688 256 GKALEKAWRTEI--PIPRGGPHRFAGFPHVIYLSLVSSVE--DLNFYVIQV 302 (322)
Q Consensus 256 ~~~~~~~W~~~~--p~pr~~~~~~~v~~~~iyi~GG~~~e--~~~~~~~q~ 302 (322)
+. +++|+... |.+|.+ |++++++++||++||.+.. ..+++.+.+
T Consensus 176 ~~--~~~W~~~~~~p~~r~~-~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~ 223 (306)
T 3ii7_A 176 PA--TETWTELCPMIEARKN-HGLVFVKDKIFAVGGQNGLGGLDNVEYYDI 223 (306)
T ss_dssp TT--TTEEEEECCCSSCCBS-CEEEEETTEEEEECCEETTEEBCCEEEEET
T ss_pred CC--CCeEEECCCccchhhc-ceEEEECCEEEEEeCCCCCCCCceEEEeeC
Confidence 86 99999864 456888 8999999999999996543 234444443
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1e-31 Score=245.64 Aligned_cols=192 Identities=19% Similarity=0.256 Sum_probs=164.2
Q ss_pred hhhccCCCCCCEEEcCCCCCCcccceEEEECCEEEEEeecC---CCCCccceEEEEECCCCceeeCCCCCCCCCceeeEE
Q 020688 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYG---SLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGV 174 (322)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~p~~R~~~~~~~~~~~lyv~GG~~---~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~ 174 (322)
.+..||+.+++|+.++++|.+|..|++++++++|||+||.. ......+++++||+.+++|+.+++||. +|..|++
T Consensus 40 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~ 117 (308)
T 1zgk_A 40 YLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSV--PRNRIGV 117 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSS--CCBTCEE
T ss_pred eEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCc--CccccEE
Confidence 45677888999999999999999999999999999999983 333356789999999999999999987 8999999
Q ss_pred EEeCCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCeEEEECCEEEEEccCCCCCCCCCcceeEeEEe
Q 020688 175 VSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVK 254 (322)
Q Consensus 175 ~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~~i~~y 254 (322)
++++++|||+||.++... .+++++||+.+++|+.++++|.+|..+++++++++||++||.++....+ ++++|
T Consensus 118 ~~~~~~iyv~GG~~~~~~---~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~-----~~~~y 189 (308)
T 1zgk_A 118 GVIDGHIYAVGGSHGCIH---HNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLN-----SAECY 189 (308)
T ss_dssp EEETTEEEEECCEETTEE---CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCC-----CEEEE
T ss_pred EEECCEEEEEcCCCCCcc---cccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCc-----eEEEE
Confidence 999999999999887554 6899999999999999999999999999999999999999987654333 46788
Q ss_pred cccccccccccc--cCCCCCcceEEEEeCCEEEEEccccCC--CCceEEeec
Q 020688 255 DGKALEKAWRTE--IPIPRGGPHRFAGFPHVIYLSLVSSVE--DLNFYVIQV 302 (322)
Q Consensus 255 d~~~~~~~W~~~--~p~pr~~~~~~~v~~~~iyi~GG~~~e--~~~~~~~q~ 302 (322)
|+. +++|+.. +|.||.. |++++++++||++||.+.+ ..+++.+.+
T Consensus 190 d~~--~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~ 238 (308)
T 1zgk_A 190 YPE--RNEWRMITAMNTIRSG-AGVCVLHNCIYAAGGYDGQDQLNSVERYDV 238 (308)
T ss_dssp ETT--TTEEEECCCCSSCCBS-CEEEEETTEEEEECCBCSSSBCCCEEEEET
T ss_pred eCC--CCeEeeCCCCCCcccc-ceEEEECCEEEEEeCCCCCCccceEEEEeC
Confidence 876 9999976 4556888 7999999999999997643 345555544
No 9
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.98 E-value=2.4e-32 Score=250.53 Aligned_cols=231 Identities=17% Similarity=0.175 Sum_probs=180.2
Q ss_pred cccceeccCceeecCCcccchhhhhhhhhhhh--cccCCC--hhhhhhhhhhccCCCCCCEEEcCCCCCCcccceEEEEC
Q 020688 53 ASNWALEKSGVVVIPHVNATKIDRQRESVAVI--DKKGQD--AERFLSATFADLPAPDLEWEQMPSAPVPRLDGAAIQIK 128 (322)
Q Consensus 53 ~s~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~W~~~~~~p~~R~~~~~~~~~ 128 (322)
...+++.++.|..+|+....+....-.....+ ...+.. ........++.||+.+++|++++++|.+|..|++++++
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~ 148 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHM 148 (315)
T ss_dssp EEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEET
T ss_pred eEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEEC
Confidence 44566777777777664322211100011111 112211 11223344667888899999999999999999999999
Q ss_pred CEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECCCCc
Q 020688 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK 208 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~ 208 (322)
++|||+||.+......+++++||+.+++|+.+++||. +|..|++++++++|||+||.++... .+++++||+++++
T Consensus 149 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~---~~~~~~yd~~~~~ 223 (315)
T 4asc_A 149 DLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQT--ARSLFGATVHDGRIIVAAGVTDTGL---TSSAEVYSITDNK 223 (315)
T ss_dssp TEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSS--CCBSCEEEEETTEEEEEEEECSSSE---EEEEEEEETTTTE
T ss_pred CEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCC--chhceEEEEECCEEEEEeccCCCCc---cceEEEEECCCCe
Confidence 9999999996555668899999999999999999987 8999999999999999999877654 6899999999999
Q ss_pred EEecCCCCCCCCCCeEEEECCEEEEEccCCCCCCCCC----cceeEeEEecccccccccccccCCCCCcceEEEEeCCEE
Q 020688 209 WDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPG----LEHWSIAVKDGKALEKAWRTEIPIPRGGPHRFAGFPHVI 284 (322)
Q Consensus 209 W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~~~~~~~~----~~~~~i~~yd~~~~~~~W~~~~p~pr~~~~~~~v~~~~i 284 (322)
|+.++++|.+|..+++++++++|||+||.+.....+. ...-++++||+. +++|+..++.||.. |++++++++|
T Consensus 224 W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~--~~~W~~~~~~~r~~-~~~~~~~~~l 300 (315)
T 4asc_A 224 WAPFEAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEE--EKKWEGVLREIAYA-AGATFLPVRL 300 (315)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETT--TTEEEEEESCSSCC-SSCEEEEEEE
T ss_pred EEECCCCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCC--CChhhhhccCCcCc-cceEEeCCEE
Confidence 9999999999999999999999999999754211111 233468899986 99999999999999 7999999999
Q ss_pred EEEcccc
Q 020688 285 YLSLVSS 291 (322)
Q Consensus 285 yi~GG~~ 291 (322)
|++....
T Consensus 301 ~v~~~~~ 307 (315)
T 4asc_A 301 NVLRLTK 307 (315)
T ss_dssp CGGGSEE
T ss_pred EEEEehh
Confidence 9997644
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.98 E-value=2.7e-31 Score=241.77 Aligned_cols=193 Identities=17% Similarity=0.264 Sum_probs=163.5
Q ss_pred hhhccCCCCCCEEEcCCCCCCcccceEEEECCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe
Q 020688 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD 177 (322)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~p~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~ 177 (322)
.+..||+.+++|++++++|.+|..|++++++++|||+||.++... .+++++||+.+++|+.+++||. +|..|+++++
T Consensus 31 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~-~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~ 107 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLR-VRTVDSYDPVKDQWTSVANMRD--RRSTLGAAVL 107 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSB-CCCEEEEETTTTEEEEECCCSS--CCBSCEEEEE
T ss_pred cEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCcc-ccceEEECCCCCceeeCCCCCc--cccceEEEEE
Confidence 355678889999999999999999999999999999999876543 6789999999999999999987 8999999999
Q ss_pred CCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCeEEEECCEEEEEccCCCCCCCCCcceeEeEEeccc
Q 020688 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGK 257 (322)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~ 257 (322)
+++|||+||.++... .+++++||+.+++|+.++++|.+|..+++++++++||++||.+.... ...-++++||+.
T Consensus 108 ~~~iyv~GG~~~~~~---~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~---~~~~~~~~yd~~ 181 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTG---LSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASR---QCLSTVECYNAT 181 (302)
T ss_dssp TTEEEEEEEECSSCE---EEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTT---EECCCEEEEETT
T ss_pred CCEEEEEcCCCCCcc---CceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCC---ccccEEEEEeCC
Confidence 999999999876554 68999999999999999999999999999999999999999865421 111256788886
Q ss_pred ccccccccc--cCCCCCcceEEEEeCCEEEEEccccCCC--CceEEeec
Q 020688 258 ALEKAWRTE--IPIPRGGPHRFAGFPHVIYLSLVSSVED--LNFYVIQV 302 (322)
Q Consensus 258 ~~~~~W~~~--~p~pr~~~~~~~v~~~~iyi~GG~~~e~--~~~~~~q~ 302 (322)
+++|+.. +|.+|.+ |++++++++||++||.+... .+++.+.+
T Consensus 182 --~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~ 227 (302)
T 2xn4_A 182 --TNEWTYIAEMSTRRSG-AGVGVLNNLLYAVGGHDGPLVRKSVEVYDP 227 (302)
T ss_dssp --TTEEEEECCCSSCCBS-CEEEEETTEEEEECCBSSSSBCCCEEEEET
T ss_pred --CCcEEECCCCcccccc-ccEEEECCEEEEECCCCCCcccceEEEEeC
Confidence 9999975 4556888 79999999999999976432 34555443
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.98 E-value=6.7e-31 Score=238.82 Aligned_cols=192 Identities=18% Similarity=0.289 Sum_probs=165.0
Q ss_pred hhhhccCCCCCCEEEcCCCCCCcccceEEEECCEEEEEeecCCCCCccceEEEEECCCCc---eeeCCCCCCCCCceeeE
Q 020688 97 ATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK---WVDRFDMPKDMAHSHLG 173 (322)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~p~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~---W~~~~~~~~p~~r~~~~ 173 (322)
..++.||+.+++|+.++++|.+|..|+++.++++|||+||.++.. ..+++++||+.+++ |+.++++|. +|..|+
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~-~~~~~~~~d~~~~~~~~W~~~~~~p~--~r~~~~ 107 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRS-RLSSVECLDYTADEDGVWYSVAPMNV--RRGLAG 107 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSC-BCCCEEEEETTCCTTCCCEEECCCSS--CCBSCE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCc-cCceEEEEECCCCCCCeeEECCCCCC--Ccccee
Confidence 445677888999999999999999999999999999999987544 47789999999999 999999987 899999
Q ss_pred EEEeCCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCeEEEECCEEEEEccCCCCCCCCCcceeEeEE
Q 020688 174 VVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAV 253 (322)
Q Consensus 174 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~~i~~ 253 (322)
+++++++|||+||..+... .+++++||+.+++|+.++++|.+|..|++++++++||++||.++....+ ++++
T Consensus 108 ~~~~~~~lyv~GG~~~~~~---~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~-----~~~~ 179 (301)
T 2vpj_A 108 ATTLGDMIYVSGGFDGSRR---HTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILN-----SVEK 179 (301)
T ss_dssp EEEETTEEEEECCBCSSCB---CCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCC-----CEEE
T ss_pred EEEECCEEEEEcccCCCcc---cceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccc-----eEEE
Confidence 9999999999999986654 7899999999999999999999999999999999999999987654333 4668
Q ss_pred ecccccccccccc--cCCCCCcceEEEEeCCEEEEEccccCCC--CceEEeec
Q 020688 254 KDGKALEKAWRTE--IPIPRGGPHRFAGFPHVIYLSLVSSVED--LNFYVIQV 302 (322)
Q Consensus 254 yd~~~~~~~W~~~--~p~pr~~~~~~~v~~~~iyi~GG~~~e~--~~~~~~q~ 302 (322)
||+. +++|+.. +|.+|.. |++++++++||++||.+... .+++.+.+
T Consensus 180 ~d~~--~~~W~~~~~~p~~r~~-~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 229 (301)
T 2vpj_A 180 YDPH--TGHWTNVTPMATKRSG-AGVALLNDHIYVVGGFDGTAHLSSVEAYNI 229 (301)
T ss_dssp EETT--TTEEEEECCCSSCCBS-CEEEEETTEEEEECCBCSSSBCCCEEEEET
T ss_pred EeCC--CCcEEeCCCCCccccc-ceEEEECCEEEEEeCCCCCcccceEEEEeC
Confidence 8876 9999986 4556888 79999999999999976443 34555544
No 12
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.97 E-value=5.9e-31 Score=241.50 Aligned_cols=185 Identities=18% Similarity=0.243 Sum_probs=160.4
Q ss_pred hhhhccCCCCCCEEEcCCCCCCcccceEEEECCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE
Q 020688 97 ATFADLPAPDLEWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176 (322)
Q Consensus 97 ~~~~~~~~~~~~W~~~~~~p~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~ 176 (322)
..++.||+.+++|++++++|.+|..|++++++++|||+||.+......+++++||+.+++|+.++++|. +|..|++++
T Consensus 127 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~ 204 (318)
T 2woz_A 127 DSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKT--PRSMFGVAI 204 (318)
T ss_dssp EEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSS--CCBSCEEEE
T ss_pred ceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCC--CcccceEEE
Confidence 446678888999999999999999999999999999999986555567889999999999999999887 899999999
Q ss_pred eCCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCeEEEECCEEEEEccCCCCCCCC----CcceeEeE
Q 020688 177 DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTP----GLEHWSIA 252 (322)
Q Consensus 177 ~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~~~~~~~----~~~~~~i~ 252 (322)
++++|||+||.+.... .+++++||+++++|+.++++|.+|..|++++++++||++||.+...... ....-++.
T Consensus 205 ~~~~iyv~GG~~~~~~---~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~ 281 (318)
T 2woz_A 205 HKGKIVIAGGVTEDGL---SASVEAFDLKTNKWEVMTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIW 281 (318)
T ss_dssp ETTEEEEEEEEETTEE---EEEEEEEETTTCCEEECCCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEE
T ss_pred ECCEEEEEcCcCCCCc---cceEEEEECCCCeEEECCCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEE
Confidence 9999999999887654 6899999999999999999999999999999999999999986531110 11223567
Q ss_pred EecccccccccccccCCCCCcceEEEEeCCEEEEEcc
Q 020688 253 VKDGKALEKAWRTEIPIPRGGPHRFAGFPHVIYLSLV 289 (322)
Q Consensus 253 ~yd~~~~~~~W~~~~p~pr~~~~~~~v~~~~iyi~GG 289 (322)
+||+. +++|+..+|.+|.. |++++++++|||+..
T Consensus 282 ~yd~~--~~~W~~~~~~~r~~-~~~~~~~~~iyi~~~ 315 (318)
T 2woz_A 282 KYEDD--KKEWAGMLKEIRYA-SGASCLATRLNLFKL 315 (318)
T ss_dssp EEETT--TTEEEEEESCCGGG-TTCEEEEEEEEGGGC
T ss_pred EEeCC--CCEehhhccccccc-ccceeeCCEEEEEEe
Confidence 89986 99999998889999 799999999999854
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=3.8e-30 Score=239.51 Aligned_cols=188 Identities=18% Similarity=0.234 Sum_probs=148.8
Q ss_pred hhhccCCC--CCCEEEcCCCC-CCcccceEEEECCEEEEEeec-C---CCCCccceEEEEECCCCceeeCCCCCCCCCce
Q 020688 98 TFADLPAP--DLEWEQMPSAP-VPRLDGAAIQIKNLFYVFAGY-G---SLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHS 170 (322)
Q Consensus 98 ~~~~~~~~--~~~W~~~~~~p-~~R~~~~~~~~~~~lyv~GG~-~---~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~ 170 (322)
.++.||+. +++|+.+++|| .+|..|++++++++|||+||. + .....++++++||+.+++|+.+++|+ |.+|.
T Consensus 32 ~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~-p~~r~ 110 (357)
T 2uvk_A 32 AWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA-PMGMA 110 (357)
T ss_dssp CEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC-SSCCS
T ss_pred eEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC-Ccccc
Confidence 35567775 48999999999 899999999999999999998 2 23345788999999999999999998 45999
Q ss_pred eeEEEEeCCEEEEEecccCCCC-------------------------------CCCCceEEEEECCCCcEEecCCCCCCC
Q 020688 171 HLGVVSDGRYIYIVSGQYGPQC-------------------------------RGPTSRTFVLDSETRKWDSIPPLPSPR 219 (322)
Q Consensus 171 ~~~~~~~~~~iyv~GG~~~~~~-------------------------------~~~~~~~~~yD~~t~~W~~~~~~p~~r 219 (322)
.|++++++++|||+||.+.... ....+++++||+.+++|+.++++|.+|
T Consensus 111 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~ 190 (357)
T 2uvk_A 111 GHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYG 190 (357)
T ss_dssp SEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCC
T ss_pred cceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCC
Confidence 9999999999999999764310 001579999999999999999999876
Q ss_pred CC-CeEEEECCEEEEEccCCCCCCCCCcceeEeEEecccccccccccccCC--CCC--cceEEEEeCCEEEEEcccc
Q 020688 220 YS-PATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPI--PRG--GPHRFAGFPHVIYLSLVSS 291 (322)
Q Consensus 220 ~~-~~~~~~~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~~~~~~W~~~~p~--pr~--~~~~~~v~~~~iyi~GG~~ 291 (322)
.. +++++++++|||+||...... ..-++.+||+++.+++|+...++ ||. + |++++++++|||+||.+
T Consensus 191 ~~~~~~~~~~~~iyv~GG~~~~~~----~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~-~~~~~~~~~iyv~GG~~ 262 (357)
T 2uvk_A 191 TAGAAVVNKGDKTWLINGEAKPGL----RTDAVFELDFTGNNLKWNKLAPVSSPDGVAG-GFAGISNDSLIFAGGAG 262 (357)
T ss_dssp CBSCEEEEETTEEEEECCEEETTE----ECCCEEEEECC---CEEEECCCSSTTTCCBS-CEEEEETTEEEEECCEE
T ss_pred cccccEEEECCEEEEEeeecCCCc----ccCceEEEEecCCCCcEEecCCCCCCccccc-ceEEEECCEEEEEcCcc
Confidence 55 999999999999999754321 11134567654459999986544 543 4 67999999999999964
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.96 E-value=4.2e-29 Score=232.45 Aligned_cols=193 Identities=15% Similarity=0.209 Sum_probs=151.4
Q ss_pred hhhhhccCCCCCCEEEcCCCC-CCcccceEEEECCEEEEEeecCCCC---------------------------------
Q 020688 96 SATFADLPAPDLEWEQMPSAP-VPRLDGAAIQIKNLFYVFAGYGSLD--------------------------------- 141 (322)
Q Consensus 96 ~~~~~~~~~~~~~W~~~~~~p-~~R~~~~~~~~~~~lyv~GG~~~~~--------------------------------- 141 (322)
...++.||+.+++|+++++++ .+|..|++++++++|||+||.+...
T Consensus 85 ~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (357)
T 2uvk_A 85 FNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDY 164 (357)
T ss_dssp CCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGG
T ss_pred eccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcccccccc
Confidence 344667888899999999998 8999999999999999999975432
Q ss_pred CccceEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEEC--CCCcEEecCCCCCC-
Q 020688 142 YVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDS--ETRKWDSIPPLPSP- 218 (322)
Q Consensus 142 ~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~--~t~~W~~~~~~p~~- 218 (322)
..++++++||+.+++|+.++++|.+ +|..+++++++++|||+||.++... ...++++||+ .+++|+.++++|.+
T Consensus 165 ~~~~~v~~yd~~~~~W~~~~~~p~~-~~~~~~~~~~~~~iyv~GG~~~~~~--~~~~v~~~d~d~~~~~W~~~~~~~~~~ 241 (357)
T 2uvk_A 165 FFNKFLLSFDPSTQQWSYAGESPWY-GTAGAAVVNKGDKTWLINGEAKPGL--RTDAVFELDFTGNNLKWNKLAPVSSPD 241 (357)
T ss_dssp CCCCEEEEEETTTTEEEEEEECSSC-CCBSCEEEEETTEEEEECCEEETTE--ECCCEEEEECC---CEEEECCCSSTTT
T ss_pred CCcccEEEEeCCCCcEEECCCCCCC-CcccccEEEECCEEEEEeeecCCCc--ccCceEEEEecCCCCcEEecCCCCCCc
Confidence 2357899999999999999988863 3555999999999999999876542 2678999986 99999999988766
Q ss_pred -CCCCeEEEECCEEEEEccCCCCC------------CCCCcceeEeEEecccccccccccc--cCCCCCcceEEEEeCCE
Q 020688 219 -RYSPATQLWRGRLHVMGGSKENR------------HTPGLEHWSIAVKDGKALEKAWRTE--IPIPRGGPHRFAGFPHV 283 (322)
Q Consensus 219 -r~~~~~~~~~~~Lyi~GG~~~~~------------~~~~~~~~~i~~yd~~~~~~~W~~~--~p~pr~~~~~~~v~~~~ 283 (322)
|.++++++++++|||+||.+... ........++++||+. +++|+.. +|.||.+ |++++++++
T Consensus 242 ~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~-~~~~~~~~~ 318 (357)
T 2uvk_A 242 GVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWH--NGKWDKSGELSQGRAY-GVSLPWNNS 318 (357)
T ss_dssp CCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEEEECSSCCBS-SEEEEETTE
T ss_pred ccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecC--CCceeeCCCCCCCccc-ceeEEeCCE
Confidence 45788999999999999974321 1122334677899986 9999986 5567888 799999999
Q ss_pred EEEEccccCCC
Q 020688 284 IYLSLVSSVED 294 (322)
Q Consensus 284 iyi~GG~~~e~ 294 (322)
|||+||.+...
T Consensus 319 i~v~GG~~~~~ 329 (357)
T 2uvk_A 319 LLIIGGETAGG 329 (357)
T ss_dssp EEEEEEECGGG
T ss_pred EEEEeeeCCCC
Confidence 99999976543
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.95 E-value=1.2e-27 Score=242.20 Aligned_cols=192 Identities=10% Similarity=0.080 Sum_probs=158.9
Q ss_pred hhhhccCCCCCCEEEcC-C-----CCCCcccceEEEE--CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCC
Q 020688 97 ATFADLPAPDLEWEQMP-S-----APVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMA 168 (322)
Q Consensus 97 ~~~~~~~~~~~~W~~~~-~-----~p~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~ 168 (322)
..++.||+.+++|+.++ + +|.+|..|+++++ +++|||+||.+.....++++|+||+.+++|+.+++||. +
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~--~ 489 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSH--T 489 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSB--C
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCC--C
Confidence 34667888899999987 5 7899999999999 99999999997766567889999999999999999987 8
Q ss_pred ceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCC---CCCCCCCCeEEEEC---CEEEEEccCCCCC
Q 020688 169 HSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP---LPSPRYSPATQLWR---GRLHVMGGSKENR 241 (322)
Q Consensus 169 r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~---~p~~r~~~~~~~~~---~~Lyi~GG~~~~~ 241 (322)
|..|+++++ +++|||+||.+... ++++||+.+++|+.+++ +|.+|.+|++++++ ++|||+||.....
T Consensus 490 R~~h~~~~~~~~~iyv~GG~~~~~------~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~ 563 (695)
T 2zwa_A 490 RFRHSACSLPDGNVLILGGVTEGP------AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQ 563 (695)
T ss_dssp CBSCEEEECTTSCEEEECCBCSSC------SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTS
T ss_pred cccceEEEEcCCEEEEECCCCCCC------CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCC
Confidence 999999996 99999999986543 79999999999999986 89999999988877 8999999985432
Q ss_pred CCCCcceeEeEEecccccccc------cccc---cCCCCCcceEEEEeC-CEEEEEccccCC-----CCceEEeec
Q 020688 242 HTPGLEHWSIAVKDGKALEKA------WRTE---IPIPRGGPHRFAGFP-HVIYLSLVSSVE-----DLNFYVIQV 302 (322)
Q Consensus 242 ~~~~~~~~~i~~yd~~~~~~~------W~~~---~p~pr~~~~~~~v~~-~~iyi~GG~~~e-----~~~~~~~q~ 302 (322)
. ...-++.+||+. +++ |+.. ++.+|.+ |++++++ ++|||+||.+.. ..+++.+.+
T Consensus 564 ~---~~~~~v~~yd~~--~~~w~~~~~W~~~~~~p~~~R~~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 633 (695)
T 2zwa_A 564 T---TVSDKAIIFKYD--AENATEPITVIKKLQHPLFQRYG-SQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDP 633 (695)
T ss_dssp S---CBCCEEEEEEEC--TTCSSCCEEEEEEEECGGGCCBS-CEEEEEETTEEEEECCBCSSCCCCTTTSEEEEET
T ss_pred C---eeeCcEEEEEcc--CCccccceEEEEcCCCCCCCccc-ceEEEeCCCEEEEECCccCCCCCCCCCeEEEEEC
Confidence 1 111256688876 888 7764 3468999 7999998 999999996532 445666554
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.93 E-value=2.1e-25 Score=225.75 Aligned_cols=179 Identities=12% Similarity=0.148 Sum_probs=143.7
Q ss_pred CEEEcCCCCCCcccceEEEECCEEEEEeecCCCCCccceEEEEECCCCceeeCC-CCC---CCCCceeeEEEEe--CCEE
Q 020688 108 EWEQMPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRF-DMP---KDMAHSHLGVVSD--GRYI 181 (322)
Q Consensus 108 ~W~~~~~~p~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~-~~~---~p~~r~~~~~~~~--~~~i 181 (322)
+|...+..|.+|.++ +++++++|||+||.+. ...+++++||+.+++|+.++ ++| .|.+|.+|+++++ +++|
T Consensus 378 ~~~~~~~~p~rr~g~-~~~~~~~iyv~GG~~~--~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~l 454 (695)
T 2zwa_A 378 QLLECECPINRKFGD-VDVAGNDVFYMGGSNP--YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQL 454 (695)
T ss_dssp EEEECCCTTCCBSCE-EEECSSCEEEECCBSS--SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEE
T ss_pred eEeccCCCCCCceeE-EEEECCEEEEECCCCC--CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEE
Confidence 355555556656654 4458999999999876 44788999999999999988 632 2448999999999 9999
Q ss_pred EEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCeEEEE-CCEEEEEccCCCCCCCCCcceeEeEEecccccc
Q 020688 182 YIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALE 260 (322)
Q Consensus 182 yv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~~~~-~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~~~~ 260 (322)
||+||.+.... ..+++++||+.+++|+.++++|.+|.+|+++++ +++|||+||.+... ++++||+. +
T Consensus 455 yv~GG~~~~~~--~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~--------~v~~yd~~--t 522 (695)
T 2zwa_A 455 LLIGGRKAPHQ--GLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP--------AMLLYNVT--E 522 (695)
T ss_dssp EEECCBSSTTC--BCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC--------SEEEEETT--T
T ss_pred EEEcCCCCCCC--ccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC--------CEEEEECC--C
Confidence 99999987552 278999999999999999999999999999997 99999999986543 56789986 9
Q ss_pred cccccc-----cCCCCCcceEEEEeC---CEEEEEccccCC----CCceEEeec
Q 020688 261 KAWRTE-----IPIPRGGPHRFAGFP---HVIYLSLVSSVE----DLNFYVIQV 302 (322)
Q Consensus 261 ~~W~~~-----~p~pr~~~~~~~v~~---~~iyi~GG~~~e----~~~~~~~q~ 302 (322)
++|+.. +|.||.+ |++++++ ++||++||.+.. ..+++.+.+
T Consensus 523 ~~W~~~~~~g~~p~~r~~-~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~ 575 (695)
T 2zwa_A 523 EIFKDVTPKDEFFQNSLV-SAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKY 575 (695)
T ss_dssp TEEEECCCSSGGGGSCCB-SCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEE
T ss_pred CceEEccCCCCCCCcccc-eeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEc
Confidence 999975 4557888 7877776 999999997432 245555554
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.93 E-value=1.9e-25 Score=224.56 Aligned_cols=205 Identities=12% Similarity=0.078 Sum_probs=153.7
Q ss_pred hhhccCCCCCCEEEcCCCCCCcccceEEEE-CCEEEEEeecCCCCCccceEEEEECCCCceeeC-----CCCCCCC----
Q 020688 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDR-----FDMPKDM---- 167 (322)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~p~~R~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~-----~~~~~p~---- 167 (322)
.+..||+.+++|+++++||.+|..|+++++ +++|||+||.......++++++||+.+++|+.+ .+|+.+.
T Consensus 266 ~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~ 345 (656)
T 1k3i_A 266 KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGL 345 (656)
T ss_dssp CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGG
T ss_pred ceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccce
Confidence 467788889999999999999999999999 999999999544334578899999999999986 3333210
Q ss_pred ---------------------------------------------------CceeeEEEE---eCCEEEEEecccCCCCC
Q 020688 168 ---------------------------------------------------AHSHLGVVS---DGRYIYIVSGQYGPQCR 193 (322)
Q Consensus 168 ---------------------------------------------------~r~~~~~~~---~~~~iyv~GG~~~~~~~ 193 (322)
++..++++. .+++|||+||.......
T Consensus 346 ~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~ 425 (656)
T 1k3i_A 346 YRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDS 425 (656)
T ss_dssp GTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSS
T ss_pred eecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCC
Confidence 011233433 48999999997532211
Q ss_pred CCCc---eEEEEECCCCcEEecC--CCCCCCCCCeEEEE-CCEEEEEccCCCCC-CCCCcceeEeEEecccccccccccc
Q 020688 194 GPTS---RTFVLDSETRKWDSIP--PLPSPRYSPATQLW-RGRLHVMGGSKENR-HTPGLEHWSIAVKDGKALEKAWRTE 266 (322)
Q Consensus 194 ~~~~---~~~~yD~~t~~W~~~~--~~p~~r~~~~~~~~-~~~Lyi~GG~~~~~-~~~~~~~~~i~~yd~~~~~~~W~~~ 266 (322)
...+ ++++||+.+++|..+. +||.+|..++++++ +++|||+||.+... +.......++++||+. +++|+..
T Consensus 426 ~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~--t~~W~~~ 503 (656)
T 1k3i_A 426 DATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPE--QDTFYKQ 503 (656)
T ss_dssp BCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGG--GTEEEEC
T ss_pred CcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCC--CCceeec
Confidence 1133 7899999999999986 99999999998888 99999999975321 1122233467889986 9999976
Q ss_pred --cCCCCCcceEEEEe--CCEEEEEccc-----cCCCCceEEeecccc
Q 020688 267 --IPIPRGGPHRFAGF--PHVIYLSLVS-----SVEDLNFYVIQVPWE 305 (322)
Q Consensus 267 --~p~pr~~~~~~~v~--~~~iyi~GG~-----~~e~~~~~~~q~~~~ 305 (322)
++.||.+ |+++++ +++||++||. ..+.|+..++..+..
T Consensus 504 ~~~~~~R~~-hs~a~ll~dg~v~v~GG~~~~~~~~~~~~~e~~~Ppyl 550 (656)
T 1k3i_A 504 NPNSIVRVY-HSISLLLPDGRVFNGGGGLCGDCTTNHFDAQIFTPNYL 550 (656)
T ss_dssp CCCSSCCCT-TEEEEECTTSCEEEEECCCCTTCSCCCCEEEEEECGGG
T ss_pred CCCCCcccc-ccHhhcCCCcEEEecCCCCCCCCCCCeeEEEEEeChhh
Confidence 4567888 888888 9999999995 355666655554433
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.89 E-value=6e-23 Score=206.40 Aligned_cols=181 Identities=12% Similarity=0.149 Sum_probs=139.4
Q ss_pred hhhccCCCCCCEEEcCCCCCCcccce--EEE-ECCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEE
Q 020688 98 TFADLPAPDLEWEQMPSAPVPRLDGA--AIQ-IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGV 174 (322)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~p~~R~~~~--~~~-~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~ 174 (322)
.+..||+.+++|+.++.+|.+|..++ +++ .+++||++||.+.. ++++||+.+++|+.+++|+. +|..|++
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~-----~v~~yd~~t~~W~~~~~~~~--~R~~~s~ 292 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAK-----KTSLYDSSSDSWIPGPDMQV--ARGYQSS 292 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTT-----CEEEEEGGGTEEEECCCCSS--CCSSCEE
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCC-----ceEEecCcCCceeECCCCCc--cccccce
Confidence 45678899999999999988887654 343 58999999997543 59999999999999999988 8999999
Q ss_pred EEe-CCEEEEEecc-cCCCCCCCCceEEEEECCCCcEEecC-----CCCCCC----------------------------
Q 020688 175 VSD-GRYIYIVSGQ-YGPQCRGPTSRTFVLDSETRKWDSIP-----PLPSPR---------------------------- 219 (322)
Q Consensus 175 ~~~-~~~iyv~GG~-~~~~~~~~~~~~~~yD~~t~~W~~~~-----~~p~~r---------------------------- 219 (322)
+++ +++|||+||. ++... .+++++||+.+++|+.++ +++..|
T Consensus 293 ~~~~dg~iyv~GG~~~~~~~---~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~ 369 (656)
T 1k3i_A 293 ATMSDGRVFTIGGSWSGGVF---EKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPST 369 (656)
T ss_dssp EECTTSCEEEECCCCCSSSC---CCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSS
T ss_pred EEecCCeEEEEeCcccCCcc---cccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCcc
Confidence 999 9999999994 44333 688999999999999973 333321
Q ss_pred -----------------------------CCCeEEE---ECCEEEEEccCCCCC-CCCCcceeEeEEecccccccccccc
Q 020688 220 -----------------------------YSPATQL---WRGRLHVMGGSKENR-HTPGLEHWSIAVKDGKALEKAWRTE 266 (322)
Q Consensus 220 -----------------------------~~~~~~~---~~~~Lyi~GG~~~~~-~~~~~~~~~i~~yd~~~~~~~W~~~ 266 (322)
..+++++ .+++||++||..... .........+++||+. +++|...
T Consensus 370 ~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~--~~~W~~~ 447 (656)
T 1k3i_A 370 AMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPG--TSPNTVF 447 (656)
T ss_dssp EEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTT--SCCEEEE
T ss_pred ceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCC--CCCeeEE
Confidence 1233332 489999999975321 1112234568889986 8999864
Q ss_pred ----cCCCCCcceEEEEe-CCEEEEEcccc
Q 020688 267 ----IPIPRGGPHRFAGF-PHVIYLSLVSS 291 (322)
Q Consensus 267 ----~p~pr~~~~~~~v~-~~~iyi~GG~~ 291 (322)
+|.+|.. |+++++ +++|||+||.+
T Consensus 448 ~~~~mp~~R~~-~~~~~l~~g~i~v~GG~~ 476 (656)
T 1k3i_A 448 ASNGLYFARTF-HTSVVLPDGSTFITGGQR 476 (656)
T ss_dssp CTTCCSSCCBS-CEEEECTTSCEEEECCBS
T ss_pred ccCCCCCCccc-CCeEECCCCCEEEECCcc
Confidence 4667888 788888 99999999965
No 19
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.41 E-value=0.0073 Score=52.57 Aligned_cols=101 Identities=16% Similarity=0.144 Sum_probs=74.3
Q ss_pred ccceEEEECCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceE
Q 020688 120 LDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRT 199 (322)
Q Consensus 120 ~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 199 (322)
+.+++...++.||+-.|..+. +.+.++|+.+.+-....+++. .-...+++..+++||+.... .+.+
T Consensus 22 ftqGL~~~~~~LyestG~~g~----S~v~~vD~~tgkv~~~~~l~~--~~fgeGi~~~~~~ly~ltw~--------~~~v 87 (243)
T 3mbr_X 22 FTEGLFYLRGHLYESTGETGR----SSVRKVDLETGRILQRAEVPP--PYFGAGIVAWRDRLIQLTWR--------NHEG 87 (243)
T ss_dssp CEEEEEEETTEEEEEECCTTS----CEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTEEEEEESS--------SSEE
T ss_pred ccccEEEECCEEEEECCCCCC----ceEEEEECCCCCEEEEEeCCC--CcceeEEEEeCCEEEEEEee--------CCEE
Confidence 345677779999999986543 459999999998766556664 44667888899999998643 5789
Q ss_pred EEEECCCCcEEecCCCCCCCCCCeEEEECCEEEEEcc
Q 020688 200 FVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGG 236 (322)
Q Consensus 200 ~~yD~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG 236 (322)
++||++|.+=. ..++.+..+.+++..+++||+.-|
T Consensus 88 ~v~D~~tl~~~--~ti~~~~~Gwglt~dg~~L~vSdg 122 (243)
T 3mbr_X 88 FVYDLATLTPR--ARFRYPGEGWALTSDDSHLYMSDG 122 (243)
T ss_dssp EEEETTTTEEE--EEEECSSCCCEEEECSSCEEEECS
T ss_pred EEEECCcCcEE--EEEeCCCCceEEeeCCCEEEEECC
Confidence 99999886533 233334456777777888999876
No 20
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.27 E-value=0.0038 Score=54.95 Aligned_cols=99 Identities=12% Similarity=0.045 Sum_probs=70.9
Q ss_pred ceEEEECCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEE
Q 020688 122 GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFV 201 (322)
Q Consensus 122 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~ 201 (322)
.+....++.||+..|..+. +.+.++|+++.+-...-+++. .-...+++..+++||+.... .+.+++
T Consensus 46 qGL~~~~~~LyestG~~g~----S~v~~vD~~Tgkv~~~~~l~~--~~FgeGit~~g~~ly~ltw~--------~~~v~v 111 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNGR----SSIRKVDIESGKTLQQIELGK--RYFGEGISDWKDKIVGLTWK--------NGLGFV 111 (262)
T ss_dssp EEEEEETTEEEEEEEETTE----EEEEEECTTTCCEEEEEECCT--TCCEEEEEEETTEEEEEESS--------SSEEEE
T ss_pred ceEEEECCEEEEECCCCCC----ceEEEEECCCCcEEEEEecCC--ccceeEEEEeCCEEEEEEee--------CCEEEE
Confidence 4555568999999996542 458999999998665445553 34566788899999999643 468999
Q ss_pred EECCCCcEEecCCCCCCCCCCeEEEECCEEEEEcc
Q 020688 202 LDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGG 236 (322)
Q Consensus 202 yD~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG 236 (322)
||++|.+=.. .++.+..+.+++..+++||+.-|
T Consensus 112 ~D~~t~~~~~--ti~~~~eG~glt~dg~~L~~SdG 144 (262)
T 3nol_A 112 WNIRNLRQVR--SFNYDGEGWGLTHNDQYLIMSDG 144 (262)
T ss_dssp EETTTCCEEE--EEECSSCCCCEEECSSCEEECCS
T ss_pred EECccCcEEE--EEECCCCceEEecCCCEEEEECC
Confidence 9998876432 23333456677777788888866
No 21
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.77 E-value=0.021 Score=50.29 Aligned_cols=96 Identities=14% Similarity=0.115 Sum_probs=68.6
Q ss_pred ceEEEECCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEE
Q 020688 122 GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFV 201 (322)
Q Consensus 122 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~ 201 (322)
.+....++.||+..|..+ .+.++|+++.+-...- ++. .-...+++..+++||+.... .+.+++
T Consensus 58 qGL~~~~~~Ly~stG~~g------~v~~iD~~Tgkv~~~~-l~~--~~FgeGit~~g~~Ly~ltw~--------~~~v~V 120 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQG------TLRQLSLESAQPVWME-RLG--NIFAEGLASDGERLYQLTWT--------EGLLFT 120 (268)
T ss_dssp EEEEEETTEEEEEETTTT------EEEECCSSCSSCSEEE-ECT--TCCEEEEEECSSCEEEEESS--------SCEEEE
T ss_pred ceEEEECCEEEEEcCCCC------EEEEEECCCCcEEeEE-CCC--CcceeEEEEeCCEEEEEEcc--------CCEEEE
Confidence 456666899999998533 3888999998754433 443 34556788899999998643 468999
Q ss_pred EECCCCcEEecCCCCCCCCCCeEEEECCEEEEEcc
Q 020688 202 LDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGG 236 (322)
Q Consensus 202 yD~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG 236 (322)
||++|.+=.. .++.+..+.+++..+++||+.-|
T Consensus 121 ~D~~Tl~~~~--ti~~~~eGwGLt~Dg~~L~vSdG 153 (268)
T 3nok_A 121 WSGMPPQRER--TTRYSGEGWGLCYWNGKLVRSDG 153 (268)
T ss_dssp EETTTTEEEE--EEECSSCCCCEEEETTEEEEECS
T ss_pred EECCcCcEEE--EEeCCCceeEEecCCCEEEEECC
Confidence 9998865332 22333456778888899999876
No 22
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.55 E-value=0.39 Score=42.80 Aligned_cols=162 Identities=12% Similarity=0.023 Sum_probs=89.9
Q ss_pred hhhhccCCCCCCEEEcC-----CCCCCcccceEEEECCEEEEEeecCCCCCccceEEEEECCCCcee-eCCCCCCCCCce
Q 020688 97 ATFADLPAPDLEWEQMP-----SAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWV-DRFDMPKDMAHS 170 (322)
Q Consensus 97 ~~~~~~~~~~~~W~~~~-----~~p~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~-~~~~~~~p~~r~ 170 (322)
..+.++|+.+.+..+.- ..+.......++..++++|+.... .+.+.++|+.+.+-. .++... .
T Consensus 17 ~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~------~~~v~viD~~t~~~~~~i~~~~-----~ 85 (328)
T 3dsm_A 17 ATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN------SHVIFAIDINTFKEVGRITGFT-----S 85 (328)
T ss_dssp BEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG------GTEEEEEETTTCCEEEEEECCS-----S
T ss_pred ceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC------CCEEEEEECcccEEEEEcCCCC-----C
Confidence 34556666666654321 112223335566779999998752 356999999988753 343222 2
Q ss_pred eeEEEE-eCCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCC----CCCCCeEEEECCEEEEEccCCCCCCCCC
Q 020688 171 HLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPS----PRYSPATQLWRGRLHVMGGSKENRHTPG 245 (322)
Q Consensus 171 ~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~----~r~~~~~~~~~~~Lyi~GG~~~~~~~~~ 245 (322)
-..+++ .++++||.... ...+.++|+++.+-...-+... ......++..+++||+..-. ...
T Consensus 86 p~~i~~~~~g~lyv~~~~--------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~----~~~- 152 (328)
T 3dsm_A 86 PRYIHFLSDEKAYVTQIW--------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS----YQN- 152 (328)
T ss_dssp EEEEEEEETTEEEEEEBS--------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT----TCC-
T ss_pred CcEEEEeCCCeEEEEECC--------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC----CCC-
Confidence 223444 67899998642 3579999999886442211111 00223455588999998520 111
Q ss_pred cceeEeEEecccccccccccccCCCCCcceEEEEe-CCEEEEEcc
Q 020688 246 LEHWSIAVKDGKALEKAWRTEIPIPRGGPHRFAGF-PHVIYLSLV 289 (322)
Q Consensus 246 ~~~~~i~~yd~~~~~~~W~~~~p~pr~~~~~~~v~-~~~iyi~GG 289 (322)
.+.++|+. +.+.....+.+.. ++.+++. +|++|+...
T Consensus 153 ----~v~viD~~--t~~~~~~i~~g~~-p~~i~~~~dG~l~v~~~ 190 (328)
T 3dsm_A 153 ----RILKIDTE--TDKVVDELTIGIQ-PTSLVMDKYNKMWTITD 190 (328)
T ss_dssp ----EEEEEETT--TTEEEEEEECSSC-BCCCEECTTSEEEEEBC
T ss_pred ----EEEEEECC--CCeEEEEEEcCCC-ccceEEcCCCCEEEEEC
Confidence 45667765 4443332222211 1344443 688888753
No 23
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.51 E-value=0.09 Score=46.29 Aligned_cols=99 Identities=14% Similarity=0.050 Sum_probs=65.9
Q ss_pred ceEEEEC-CEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEE
Q 020688 122 GAAIQIK-NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTF 200 (322)
Q Consensus 122 ~~~~~~~-~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 200 (322)
++++..+ +.||+..|..+ .+.+.++|+.+.+=...-+++. .....+++..+++||+..-. .+.+.
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~----~s~v~~iD~~tg~v~~~i~l~~--~~fgeGi~~~g~~lyv~t~~--------~~~v~ 89 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG----RSSVRQVALQTGKVENIHKMDD--SYFGEGLTLLNEKLYQVVWL--------KNIGF 89 (266)
T ss_dssp EEEEECSTTEEEEEECSTT----TCEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTEEEEEETT--------CSEEE
T ss_pred ccEEEeCCCeEEEECCCCC----CCEEEEEECCCCCEEEEEecCC--CcceEEEEEeCCEEEEEEec--------CCEEE
Confidence 5665555 79999887432 2469999999998665434443 33556778889999998532 46799
Q ss_pred EEECCCCcEEecCCCCCC-CCCCeEEEECCEEEEEcc
Q 020688 201 VLDSETRKWDSIPPLPSP-RYSPATQLWRGRLHVMGG 236 (322)
Q Consensus 201 ~yD~~t~~W~~~~~~p~~-r~~~~~~~~~~~Lyi~GG 236 (322)
+||+.|.+= +..++.+ ..+.+++..+++||+.-|
T Consensus 90 viD~~t~~v--~~~i~~g~~~g~glt~Dg~~l~vs~g 124 (266)
T 2iwa_A 90 IYDRRTLSN--IKNFTHQMKDGWGLATDGKILYGSDG 124 (266)
T ss_dssp EEETTTTEE--EEEEECCSSSCCEEEECSSSEEEECS
T ss_pred EEECCCCcE--EEEEECCCCCeEEEEECCCEEEEECC
Confidence 999987642 2222222 334556666778998754
No 24
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.07 E-value=0.11 Score=45.04 Aligned_cols=103 Identities=20% Similarity=0.204 Sum_probs=71.9
Q ss_pred CceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCeEEEECCEEEEEccCCCCCCCCCcc
Q 020688 168 AHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLE 247 (322)
Q Consensus 168 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~ 247 (322)
.-.-.++...++.||+..|..+ .+.+.++|+++.+=.+--+++..-++.+++..+++||+....+ +
T Consensus 20 ~~ftqGL~~~~~~LyestG~~g------~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~-----~--- 85 (243)
T 3mbr_X 20 TAFTEGLFYLRGHLYESTGETG------RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN-----H--- 85 (243)
T ss_dssp TCCEEEEEEETTEEEEEECCTT------SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-----S---
T ss_pred ccccccEEEECCEEEEECCCCC------CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC-----C---
Confidence 4455688888999999998765 3568999999998766656666667788889999999986532 1
Q ss_pred eeEeEEecccccccccccccCCCCCcceEEEEeCCEEEEEcc
Q 020688 248 HWSIAVKDGKALEKAWRTEIPIPRGGPHRFAGFPHVIYLSLV 289 (322)
Q Consensus 248 ~~~i~~yd~~~~~~~W~~~~p~pr~~~~~~~v~~~~iyi~GG 289 (322)
.+.+||++ +.+-....+.+..+ .+++.-+++||+--|
T Consensus 86 --~v~v~D~~--tl~~~~ti~~~~~G-wglt~dg~~L~vSdg 122 (243)
T 3mbr_X 86 --EGFVYDLA--TLTPRARFRYPGEG-WALTSDDSHLYMSDG 122 (243)
T ss_dssp --EEEEEETT--TTEEEEEEECSSCC-CEEEECSSCEEEECS
T ss_pred --EEEEEECC--cCcEEEEEeCCCCc-eEEeeCCCEEEEECC
Confidence 34567754 33333333344445 477766777888766
No 25
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=95.91 E-value=0.56 Score=41.78 Aligned_cols=142 Identities=11% Similarity=0.024 Sum_probs=76.8
Q ss_pred eEEEECCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE-eCCEEEEEecccCCCC--CCCCceE
Q 020688 123 AAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQC--RGPTSRT 199 (322)
Q Consensus 123 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~--~~~~~~~ 199 (322)
.++..+++|||..- . ..+.+.++|+.+.+....-+... .| ..++. -++++|+......... ......+
T Consensus 135 ~i~~~~~~lyv~~~-~----~~~~v~viD~~t~~~~~~i~~g~-~p---~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v 205 (328)
T 3dsm_A 135 QMVQYGKYVYVNCW-S----YQNRILKIDTETDKVVDELTIGI-QP---TSLVMDKYNKMWTITDGGYEGSPYGYEAPSL 205 (328)
T ss_dssp CEEEETTEEEEEEC-T----TCCEEEEEETTTTEEEEEEECSS-CB---CCCEECTTSEEEEEBCCBCTTCSSCBCCCEE
T ss_pred eEEEECCEEEEEcC-C----CCCEEEEEECCCCeEEEEEEcCC-Cc---cceEEcCCCCEEEEECCCccCCccccCCceE
Confidence 44447899999842 1 12469999999988654322221 02 22333 3688888753221110 0013689
Q ss_pred EEEECCCCcEEecCCCCCCCCCCeEEEE--CCEEEEEccCCCCCCCCCcceeEeEEecccccccccccccCCCC--Ccce
Q 020688 200 FVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPR--GGPH 275 (322)
Q Consensus 200 ~~yD~~t~~W~~~~~~p~~r~~~~~~~~--~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~~~~~~W~~~~p~pr--~~~~ 275 (322)
.++|+++.+....-.++.......++.. ++.||+..+ .+.++|+. +.+.....-.+. ..+.
T Consensus 206 ~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-------------~v~~~d~~--t~~~~~~~~~~~~~~~p~ 270 (328)
T 3dsm_A 206 YRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-------------DIWRMPVE--ADRVPVRPFLEFRDTKYY 270 (328)
T ss_dssp EEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-------------SEEEEETT--CSSCCSSCSBCCCSSCEE
T ss_pred EEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-------------EEEEEECC--CCceeeeeeecCCCCceE
Confidence 9999999876543233332222344444 567888643 23356654 444322111121 2335
Q ss_pred EEEEe--CCEEEEEc
Q 020688 276 RFAGF--PHVIYLSL 288 (322)
Q Consensus 276 ~~~v~--~~~iyi~G 288 (322)
++++. ++.||+..
T Consensus 271 gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 271 GLTVNPNNGEVYVAD 285 (328)
T ss_dssp EEEECTTTCCEEEEE
T ss_pred EEEEcCCCCeEEEEc
Confidence 66663 78899986
No 26
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=94.94 E-value=2 Score=38.54 Aligned_cols=134 Identities=16% Similarity=0.219 Sum_probs=76.6
Q ss_pred eEEEECCEEEEEeecCCCCCccceEEEEECCCCc--eeeCCCCCCC-----CCceeeEEEEeCCEEEEEecccCCCCCCC
Q 020688 123 AAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKD-----MAHSHLGVVSDGRYIYIVSGQYGPQCRGP 195 (322)
Q Consensus 123 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~p-----~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 195 (322)
+-++.++.||+... ...+++||+.+.+ |+.-.....+ ......+.++.++.||+...
T Consensus 48 ~p~v~~~~v~~~~~-------~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--------- 111 (376)
T 3q7m_A 48 HPALADNVVYAADR-------AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE--------- 111 (376)
T ss_dssp CCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET---------
T ss_pred ccEEECCEEEEEcC-------CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC---------
Confidence 44567999998753 1358999997655 7653321100 12344556677999998642
Q ss_pred CceEEEEECCCCc--EEecCCCCCCCCCCeEEEECCEEEEEccCCCCCCCCCcceeEeEEecccccccccccccCCC---
Q 020688 196 TSRTFVLDSETRK--WDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIP--- 270 (322)
Q Consensus 196 ~~~~~~yD~~t~~--W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~~~~~~W~~~~p~p--- 270 (322)
...+.++|.++.+ |+.-..-. . ....++.++.+|+..+. . .+.++|....+..|+...+.+
T Consensus 112 ~g~l~a~d~~tG~~~W~~~~~~~--~-~~~p~~~~~~v~v~~~~------g-----~l~~~d~~tG~~~W~~~~~~~~~~ 177 (376)
T 3q7m_A 112 KAQVYALNTSDGTVAWQTKVAGE--A-LSRPVVSDGLVLIHTSN------G-----QLQALNEADGAVKWTVNLDMPSLS 177 (376)
T ss_dssp TSEEEEEETTTCCEEEEEECSSC--C-CSCCEEETTEEEEECTT------S-----EEEEEETTTCCEEEEEECCC----
T ss_pred CCEEEEEECCCCCEEEEEeCCCc--e-EcCCEEECCEEEEEcCC------C-----eEEEEECCCCcEEEEEeCCCCcee
Confidence 2568999998764 87643211 1 22235568888875431 1 345667643455687654332
Q ss_pred -CCcceEEEEeCCEEEEE
Q 020688 271 -RGGPHRFAGFPHVIYLS 287 (322)
Q Consensus 271 -r~~~~~~~v~~~~iyi~ 287 (322)
+.. ...++.++.+|+-
T Consensus 178 ~~~~-~~~~~~~~~v~~g 194 (376)
T 3q7m_A 178 LRGE-SAPTTAFGAAVVG 194 (376)
T ss_dssp -CCC-CCCEEETTEEEEC
T ss_pred ecCC-CCcEEECCEEEEE
Confidence 222 2445557776663
No 27
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.85 E-value=0.2 Score=43.90 Aligned_cols=101 Identities=14% Similarity=0.061 Sum_probs=66.1
Q ss_pred eeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCeEEEECCEEEEEccCCCCCCCCCccee
Q 020688 170 SHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHW 249 (322)
Q Consensus 170 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~ 249 (322)
.-.++...++.||+..|..+ .+.+.++|++|.+=..--+++..-++.+++..+++||+....+ +
T Consensus 44 ftqGL~~~~~~LyestG~~g------~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~-----~----- 107 (262)
T 3nol_A 44 FTEGFFYRNGYFYESTGLNG------RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN-----G----- 107 (262)
T ss_dssp EEEEEEEETTEEEEEEEETT------EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-----S-----
T ss_pred ccceEEEECCEEEEECCCCC------CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC-----C-----
Confidence 44566667999999998754 3568999999987655445655556677888999999996532 1
Q ss_pred EeEEecccccccccccccCCCCCcceEEEEeCCEEEEEcc
Q 020688 250 SIAVKDGKALEKAWRTEIPIPRGGPHRFAGFPHVIYLSLV 289 (322)
Q Consensus 250 ~i~~yd~~~~~~~W~~~~p~pr~~~~~~~v~~~~iyi~GG 289 (322)
.+.+||++ +.+-....+.+-.+ .+++.-++.||+.-|
T Consensus 108 ~v~v~D~~--t~~~~~ti~~~~eG-~glt~dg~~L~~SdG 144 (262)
T 3nol_A 108 LGFVWNIR--NLRQVRSFNYDGEG-WGLTHNDQYLIMSDG 144 (262)
T ss_dssp EEEEEETT--TCCEEEEEECSSCC-CCEEECSSCEEECCS
T ss_pred EEEEEECc--cCcEEEEEECCCCc-eEEecCCCEEEEECC
Confidence 34567764 43333333333344 366665666777655
No 28
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=94.67 E-value=1.9 Score=38.62 Aligned_cols=134 Identities=15% Similarity=0.161 Sum_probs=74.4
Q ss_pred ceEEEECCEEEEEeecCCCCCccceEEEEECCCCc--eeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceE
Q 020688 122 GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRT 199 (322)
Q Consensus 122 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 199 (322)
...+..++.||+... ...++.+|+.+.+ |+.-.+-. .....++.++.||+..+ ...+
T Consensus 97 ~~~~~~~~~v~v~~~-------~g~l~a~d~~tG~~~W~~~~~~~-----~~~~p~~~~~~v~v~~~---------~g~l 155 (376)
T 3q7m_A 97 GGVTVSGGHVYIGSE-------KAQVYALNTSDGTVAWQTKVAGE-----ALSRPVVSDGLVLIHTS---------NGQL 155 (376)
T ss_dssp EEEEEETTEEEEEET-------TSEEEEEETTTCCEEEEEECSSC-----CCSCCEEETTEEEEECT---------TSEE
T ss_pred cCceEeCCEEEEEcC-------CCEEEEEECCCCCEEEEEeCCCc-----eEcCCEEECCEEEEEcC---------CCeE
Confidence 344566889988543 1359999998765 76532211 12223456888888542 3468
Q ss_pred EEEECCCCc--EEecCCCCC--CCCCCeEEEECCEEEEEccCCCCCCCCCcceeEeEEecccccccccccccCCCC----
Q 020688 200 FVLDSETRK--WDSIPPLPS--PRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPR---- 271 (322)
Q Consensus 200 ~~yD~~t~~--W~~~~~~p~--~r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~~~~~~W~~~~p~pr---- 271 (322)
.+||+++.+ |+.-...+. .+.....++.++.+|+. ..++ .+.++|+...+..|+.....|.
T Consensus 156 ~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g-~~~g----------~l~~~d~~tG~~~w~~~~~~~~~~~~ 224 (376)
T 3q7m_A 156 QALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVG-GDNG----------RVSAVLMEQGQMIWQQRISQATGSTE 224 (376)
T ss_dssp EEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEEC-CTTT----------EEEEEETTTCCEEEEEECCC------
T ss_pred EEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEE-cCCC----------EEEEEECCCCcEEEEEecccCCCCcc
Confidence 999998775 877543221 12223345567877763 2211 3445665434556776543321
Q ss_pred ------CcceEEEEeCCEEEEEc
Q 020688 272 ------GGPHRFAGFPHVIYLSL 288 (322)
Q Consensus 272 ------~~~~~~~v~~~~iyi~G 288 (322)
.. ...++.++.+|+.+
T Consensus 225 ~~~~~~~~-~~p~~~~~~v~~~~ 246 (376)
T 3q7m_A 225 IDRLSDVD-TTPVVVNGVVFALA 246 (376)
T ss_dssp -----CCC-CCCEEETTEEEEEC
T ss_pred cccccccC-CCcEEECCEEEEEe
Confidence 11 24445677777764
No 29
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=92.52 E-value=1.4 Score=38.46 Aligned_cols=100 Identities=17% Similarity=0.144 Sum_probs=61.7
Q ss_pred eeEEEEeC-CEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCeEEEECCEEEEEccCCCCCCCCCccee
Q 020688 171 HLGVVSDG-RYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHW 249 (322)
Q Consensus 171 ~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~ 249 (322)
-+++++.+ +.||+..|..+ .+.+.++|+.|.+=..--+++...++.+++..+++||+..-.+ +
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~------~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~-----~----- 86 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYG------RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLK-----N----- 86 (266)
T ss_dssp EEEEEECSTTEEEEEECSTT------TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTC-----S-----
T ss_pred cccEEEeCCCeEEEECCCCC------CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecC-----C-----
Confidence 36777765 89999887532 3679999999987554434444445567778899999996422 2
Q ss_pred EeEEecccccccccccccCCC-CCcceEEEEeCCEEEEEcc
Q 020688 250 SIAVKDGKALEKAWRTEIPIP-RGGPHRFAGFPHVIYLSLV 289 (322)
Q Consensus 250 ~i~~yd~~~~~~~W~~~~p~p-r~~~~~~~v~~~~iyi~GG 289 (322)
.+.+||+. +.+=....+.+ ..+ .+++.-++++|+.-|
T Consensus 87 ~v~viD~~--t~~v~~~i~~g~~~g-~glt~Dg~~l~vs~g 124 (266)
T 2iwa_A 87 IGFIYDRR--TLSNIKNFTHQMKDG-WGLATDGKILYGSDG 124 (266)
T ss_dssp EEEEEETT--TTEEEEEEECCSSSC-CEEEECSSSEEEECS
T ss_pred EEEEEECC--CCcEEEEEECCCCCe-EEEEECCCEEEEECC
Confidence 34567754 32212222222 223 355555777888765
No 30
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=91.11 E-value=1.2 Score=38.93 Aligned_cols=98 Identities=10% Similarity=-0.040 Sum_probs=63.9
Q ss_pred eeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCeEEEECCEEEEEccCCCCCCCCCccee
Q 020688 170 SHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHW 249 (322)
Q Consensus 170 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~ 249 (322)
...++...++.||+..|.+ ..+.++|++|.+=..-- ++..-++.+++..+++||+....+ +
T Consensus 56 ftqGL~~~~~~Ly~stG~~--------g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~-----~----- 116 (268)
T 3nok_A 56 FTQGLVFHQGHFFESTGHQ--------GTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTE-----G----- 116 (268)
T ss_dssp CEEEEEEETTEEEEEETTT--------TEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSS-----C-----
T ss_pred ccceEEEECCEEEEEcCCC--------CEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccC-----C-----
Confidence 3456777799999998864 23889999987633322 554445667888899999986532 2
Q ss_pred EeEEecccccccccccccCCCCCcceEEEEeCCEEEEEcc
Q 020688 250 SIAVKDGKALEKAWRTEIPIPRGGPHRFAGFPHVIYLSLV 289 (322)
Q Consensus 250 ~i~~yd~~~~~~~W~~~~p~pr~~~~~~~v~~~~iyi~GG 289 (322)
.+.+||++ +.+-....+.+-.+ .+++.-+++||+.-|
T Consensus 117 ~v~V~D~~--Tl~~~~ti~~~~eG-wGLt~Dg~~L~vSdG 153 (268)
T 3nok_A 117 LLFTWSGM--PPQRERTTRYSGEG-WGLCYWNGKLVRSDG 153 (268)
T ss_dssp EEEEEETT--TTEEEEEEECSSCC-CCEEEETTEEEEECS
T ss_pred EEEEEECC--cCcEEEEEeCCCce-eEEecCCCEEEEECC
Confidence 34567764 33333333333344 477777888888876
No 31
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=91.11 E-value=2.7 Score=38.66 Aligned_cols=134 Identities=10% Similarity=-0.042 Sum_probs=64.0
Q ss_pred ceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCE-EEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCC
Q 020688 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRY-IYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSP 222 (322)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~ 222 (322)
..++++|..+.+...+..... ...+++.. +++ |+..+..++ ...++.+|..+.+-..+.... . ..
T Consensus 247 ~~i~~~d~~~~~~~~l~~~~~----~~~~~~~spdg~~l~~~s~~~g------~~~i~~~d~~~~~~~~l~~~~--~-~~ 313 (415)
T 2hqs_A 247 LNLYVMDLASGQIRQVTDGRS----NNTEPTWFPDSQNLAFTSDQAG------RPQVYKVNINGGAPQRITWEG--S-QN 313 (415)
T ss_dssp CEEEEEETTTCCEEECCCCSS----CEEEEEECTTSSEEEEEECTTS------SCEEEEEETTSSCCEECCCSS--S-EE
T ss_pred ceEEEEECCCCCEEeCcCCCC----cccceEECCCCCEEEEEECCCC------CcEEEEEECCCCCEEEEecCC--C-cc
Confidence 359999999888766554332 11222222 444 544432221 347899999887755543211 1 11
Q ss_pred eEEEE--CCEEEEEccCCCCCCCCCcceeEeEEecccccccccccccCCCCCcceEEEEe-CCEEEEEccccCCCCceEE
Q 020688 223 ATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRFAGF-PHVIYLSLVSSVEDLNFYV 299 (322)
Q Consensus 223 ~~~~~--~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~~~~~~W~~~~p~pr~~~~~~~v~-~~~iyi~GG~~~e~~~~~~ 299 (322)
..+.+ +++.+++++.... ...+.++|.. +.+........ ....++.. +++.+++++.+.....++.
T Consensus 314 ~~~~~spdG~~l~~~~~~~g-------~~~i~~~d~~--~~~~~~l~~~~--~~~~~~~spdg~~l~~~s~~~~~~~l~~ 382 (415)
T 2hqs_A 314 QDADVSSDGKFMVMVSSNGG-------QQHIAKQDLA--TGGVQVLSSTF--LDETPSLAPNGTMVIYSSSQGMGSVLNL 382 (415)
T ss_dssp EEEEECTTSSEEEEEEECSS-------CEEEEEEETT--TCCEEECCCSS--SCEEEEECTTSSEEEEEEEETTEEEEEE
T ss_pred cCeEECCCCCEEEEEECcCC-------ceEEEEEECC--CCCEEEecCCC--CcCCeEEcCCCCEEEEEEcCCCccEEEE
Confidence 12222 5555555443211 1234455543 44443322222 21233333 6777777665443334555
Q ss_pred eec
Q 020688 300 IQV 302 (322)
Q Consensus 300 ~q~ 302 (322)
+.+
T Consensus 383 ~d~ 385 (415)
T 2hqs_A 383 VST 385 (415)
T ss_dssp EET
T ss_pred EEC
Confidence 444
No 32
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=89.76 E-value=2.4 Score=37.73 Aligned_cols=66 Identities=17% Similarity=0.333 Sum_probs=39.4
Q ss_pred CEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe--CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
+.+|+.|+.+ ..+.++|..+.+-...-.... .-.+++.. +..||+.|+. ...+.++|+.+
T Consensus 2 ~~l~vs~~~d------~~v~v~d~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~~~~--------d~~i~v~d~~~ 63 (391)
T 1l0q_A 2 TFAYIANSES------DNISVIDVTSNKVTATIPVGS----NPMGAVISPDGTKVYVANAH--------SNDVSIIDTAT 63 (391)
T ss_dssp EEEEEEETTT------TEEEEEETTTTEEEEEEECSS----SEEEEEECTTSSEEEEEEGG--------GTEEEEEETTT
T ss_pred CEEEEEcCCC------CEEEEEECCCCeEEEEeecCC----CcceEEECCCCCEEEEECCC--------CCeEEEEECCC
Confidence 4577777642 358999998876544322221 12333332 4567787754 34688999988
Q ss_pred CcEEec
Q 020688 207 RKWDSI 212 (322)
Q Consensus 207 ~~W~~~ 212 (322)
.+-...
T Consensus 64 ~~~~~~ 69 (391)
T 1l0q_A 64 NNVIAT 69 (391)
T ss_dssp TEEEEE
T ss_pred CeEEEE
Confidence 765443
No 33
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=89.62 E-value=3.1 Score=37.00 Aligned_cols=90 Identities=17% Similarity=0.197 Sum_probs=48.6
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe--CCEEEEEecccCCCCCCCCceEEEEECC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
+..||+.|+.+ ..+.++|..+.+-...-.... .-.+++.. +..||+.+.. ...+.+||+.
T Consensus 43 g~~l~~~~~~d------~~i~v~d~~~~~~~~~~~~~~----~v~~~~~spdg~~l~~~~~~--------~~~v~v~d~~ 104 (391)
T 1l0q_A 43 GTKVYVANAHS------NDVSIIDTATNNVIATVPAGS----SPQGVAVSPDGKQVYVTNMA--------SSTLSVIDTT 104 (391)
T ss_dssp SSEEEEEEGGG------TEEEEEETTTTEEEEEEECSS----SEEEEEECTTSSEEEEEETT--------TTEEEEEETT
T ss_pred CCEEEEECCCC------CeEEEEECCCCeEEEEEECCC----CccceEECCCCCEEEEEECC--------CCEEEEEECC
Confidence 34677776542 358999998877554333222 22233332 4567776532 3568999999
Q ss_pred CCcEEecCCCCCCCCCCeEEEE--CCEEEEEccC
Q 020688 206 TRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGS 237 (322)
Q Consensus 206 t~~W~~~~~~p~~r~~~~~~~~--~~~Lyi~GG~ 237 (322)
+.+-...-... .....++.. +..||+.++.
T Consensus 105 ~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~ 136 (391)
T 1l0q_A 105 SNTVAGTVKTG--KSPLGLALSPDGKKLYVTNNG 136 (391)
T ss_dssp TTEEEEEEECS--SSEEEEEECTTSSEEEEEETT
T ss_pred CCeEEEEEeCC--CCcceEEECCCCCEEEEEeCC
Confidence 87654432211 111222222 3357777653
No 34
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=89.09 E-value=9.1 Score=34.94 Aligned_cols=74 Identities=11% Similarity=0.166 Sum_probs=43.6
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE--eCCEEEEEecccCCCCCCCCceEEEEECC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
+++.+++++.+.. ...++++|..+.+...+...+. ...+.+. .+.+|++.+..++ ...++.+|..
T Consensus 189 dg~~la~~s~~~~---~~~i~~~d~~tg~~~~l~~~~~----~~~~~~~spdg~~la~~~~~~g------~~~i~~~d~~ 255 (415)
T 2hqs_A 189 DGSKLAYVTFESG---RSALVIQTLANGAVRQVASFPR----HNGAPAFSPDGSKLAFALSKTG------SLNLYVMDLA 255 (415)
T ss_dssp TSSEEEEEECTTS---SCEEEEEETTTCCEEEEECCSS----CEEEEEECTTSSEEEEEECTTS------SCEEEEEETT
T ss_pred CCCEEEEEEecCC---CcEEEEEECCCCcEEEeecCCC----cccCEEEcCCCCEEEEEEecCC------CceEEEEECC
Confidence 4555556654332 2469999999888766554332 2222222 2445665554322 3569999999
Q ss_pred CCcEEecCC
Q 020688 206 TRKWDSIPP 214 (322)
Q Consensus 206 t~~W~~~~~ 214 (322)
+.+..++..
T Consensus 256 ~~~~~~l~~ 264 (415)
T 2hqs_A 256 SGQIRQVTD 264 (415)
T ss_dssp TCCEEECCC
T ss_pred CCCEEeCcC
Confidence 988777654
No 35
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=88.64 E-value=7.3 Score=38.44 Aligned_cols=122 Identities=20% Similarity=0.282 Sum_probs=69.2
Q ss_pred eEEEECCEEEEEeecCCCCCccceEEEEECCCCc--eeeCCCCCCCC------CceeeEEEEeCCEEEEEecccCCCCCC
Q 020688 123 AAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDM------AHSHLGVVSDGRYIYIVSGQYGPQCRG 194 (322)
Q Consensus 123 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~p~------~r~~~~~~~~~~~iyv~GG~~~~~~~~ 194 (322)
+-++.++.||+... ...++.+|..+.+ |+.-...+... .....+.++.+++||+...
T Consensus 61 ~P~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------- 125 (668)
T 1kv9_A 61 TPLFHDGVIYTSMS-------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-------- 125 (668)
T ss_dssp CCEEETTEEEEEEG-------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT--------
T ss_pred CCEEECCEEEEECC-------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC--------
Confidence 34567999999865 2458899987665 87643322100 0012345667899988642
Q ss_pred CCceEEEEECCCCc--EEecCCCCC--CCCCCeEEEECCEEEEEccCCCCCCCCCcceeEeEEeccccccccccc
Q 020688 195 PTSRTFVLDSETRK--WDSIPPLPS--PRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRT 265 (322)
Q Consensus 195 ~~~~~~~yD~~t~~--W~~~~~~p~--~r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~~~~~~W~~ 265 (322)
...+.++|.+|.+ |+.-..-+. .....+.++.++++|+..+..... .. -.+..+|....+..|+.
T Consensus 126 -dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~--~~---g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 126 -DGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYG--VR---GFVSAYDADTGKLAWRF 194 (668)
T ss_dssp -TSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTC--CB---CEEEEEETTTCCEEEEE
T ss_pred -CCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcC--CC---CEEEEEECCCCcEEEEe
Confidence 3568999998874 887532111 111223356788887743321111 11 14556776544556775
No 36
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=88.60 E-value=11 Score=32.77 Aligned_cols=96 Identities=10% Similarity=0.108 Sum_probs=53.2
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-C--CEEEEEecccCCCCCCCCceEEEEEC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-G--RYIYIVSGQYGPQCRGPTSRTFVLDS 204 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~~~yD~ 204 (322)
+++.++.|+.++ .+.+||....++..+..+... ...-.+++.. + +.+++.|+.+ ..+..||.
T Consensus 22 ~~~~l~~~~~dg------~i~iw~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~l~s~~~d--------g~v~iwd~ 86 (379)
T 3jrp_A 22 YGKRLATCSSDK------TIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCSYD--------GKVLIWKE 86 (379)
T ss_dssp SSSEEEEEETTS------CEEEEEEETTEEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETT--------SCEEEEEE
T ss_pred CCCEEEEEECCC------cEEEEecCCCcceeeeEecCC-CCcEEEEEeCCCCCCCEEEEeccC--------CEEEEEEc
Confidence 455667776432 377788776666655444320 1222233332 2 5666666643 35788899
Q ss_pred CCCcEEecCCCCCCCCCCeEEEEC----CEEEEEccCC
Q 020688 205 ETRKWDSIPPLPSPRYSPATQLWR----GRLHVMGGSK 238 (322)
Q Consensus 205 ~t~~W~~~~~~p~~r~~~~~~~~~----~~Lyi~GG~~ 238 (322)
.+.+|..+..+.........+.+. +.+++.|+.+
T Consensus 87 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 124 (379)
T 3jrp_A 87 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD 124 (379)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred CCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC
Confidence 888887765444333333333332 5677777653
No 37
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=88.25 E-value=6.4 Score=38.95 Aligned_cols=123 Identities=20% Similarity=0.278 Sum_probs=70.5
Q ss_pred eEEEECCEEEEEeecCCCCCccceEEEEECCCCc--eeeCCCCCCCC------CceeeEEEEeCCEEEEEecccCCCCCC
Q 020688 123 AAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDM------AHSHLGVVSDGRYIYIVSGQYGPQCRG 194 (322)
Q Consensus 123 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~p~------~r~~~~~~~~~~~iyv~GG~~~~~~~~ 194 (322)
+-++.++.||+... ...++.+|..+.+ |+.-...+... .....+.++.+++||+...
T Consensus 72 ~P~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-------- 136 (677)
T 1kb0_A 72 TPVVVDGIMYVSAS-------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-------- 136 (677)
T ss_dssp CCEEETTEEEEECG-------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT--------
T ss_pred CCEEECCEEEEECC-------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC--------
Confidence 34567999999865 2458999987766 87644322100 0122355678999998642
Q ss_pred CCceEEEEECCCCc--EEecCC-CCC--CCCCCeEEEECCEEEEEccCCCCCCCCCcceeEeEEecccccccccccc
Q 020688 195 PTSRTFVLDSETRK--WDSIPP-LPS--PRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTE 266 (322)
Q Consensus 195 ~~~~~~~yD~~t~~--W~~~~~-~p~--~r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~~~~~~W~~~ 266 (322)
...+.++|.+|.+ |+.-.. -+. .....+.++.++++|+..+... +... -.+.+||....+..|+..
T Consensus 137 -dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~--~~~~---g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 137 -DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAE--YGVR---GYITAYDAETGERKWRWF 207 (677)
T ss_dssp -TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTT--TCCB---CEEEEEETTTCCEEEEEE
T ss_pred -CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccc--cCCC---CEEEEEECCCCcEEEEec
Confidence 3569999998774 876532 111 1112233567888877544221 1111 135567765445567753
No 38
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=88.14 E-value=7.6 Score=34.97 Aligned_cols=98 Identities=10% Similarity=0.013 Sum_probs=52.8
Q ss_pred hhhccCCCCCCEEEcCCCCCCcccceEEEE-CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCC--CCCceeeEE
Q 020688 98 TFADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPK--DMAHSHLGV 174 (322)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~p~~R~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~--p~~r~~~~~ 174 (322)
.++.+|..+..++.+..++.+....+++.. ++++++.++.+ ..+.++|+.+.+.....+... .....-.++
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~------~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~ 175 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLED------EGMDVLDINSGQTVRLSPPEKYKKKLGFVETI 175 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTTS------SSEEEEETTTCCEEEECCCHHHHTTCCEEEEE
T ss_pred EEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCCC------CeEEEEECCCCeEeeecCcccccccCCceeEE
Confidence 344555544555554433333222222222 67887777542 248999999887665333211 001122222
Q ss_pred EE-eCCEEEEEecccCCCCCCCCceEEEEECCCCcE
Q 020688 175 VS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKW 209 (322)
Q Consensus 175 ~~-~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W 209 (322)
+. -++.+++.++. ...+.+||+.+.+-
T Consensus 176 ~~~~~~~~~~s~~~--------d~~v~~~d~~~~~~ 203 (433)
T 3bws_A 176 SIPEHNELWVSQMQ--------ANAVHVFDLKTLAY 203 (433)
T ss_dssp EEGGGTEEEEEEGG--------GTEEEEEETTTCCE
T ss_pred EEcCCCEEEEEECC--------CCEEEEEECCCceE
Confidence 32 37888888764 35688999987653
No 39
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=87.16 E-value=7.7 Score=37.51 Aligned_cols=124 Identities=19% Similarity=0.255 Sum_probs=68.5
Q ss_pred ceEEEECCEEEEEeecCCCCCccceEEEEEC-CCCc--eeeCCCCCCC-CC-----ceeeEEEEeCCEEEEEecccCCCC
Q 020688 122 GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNF-TDNK--WVDRFDMPKD-MA-----HSHLGVVSDGRYIYIVSGQYGPQC 192 (322)
Q Consensus 122 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~-~t~~--W~~~~~~~~p-~~-----r~~~~~~~~~~~iyv~GG~~~~~~ 192 (322)
.+-++.++.||+.... ...++.+|. .+.+ |+.-...... .+ ....+.++.+++||+...
T Consensus 56 ~~P~v~~g~vyv~~~~------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------ 123 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAF------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------ 123 (571)
T ss_dssp SCCEEETTEEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------
T ss_pred cccEEECCEEEEEeCC------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------
Confidence 3445679999998652 134899998 6655 8864332210 00 112345678999998642
Q ss_pred CCCCceEEEEECCCC--cEEecCCCCC-C-CCCCeEEEECCEEEEEccCCCCCCCCCcceeEeEEeccccccccccc
Q 020688 193 RGPTSRTFVLDSETR--KWDSIPPLPS-P-RYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRT 265 (322)
Q Consensus 193 ~~~~~~~~~yD~~t~--~W~~~~~~p~-~-r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~~~~~~W~~ 265 (322)
...+.++|.+|. .|+.-..-+. . ....+.++.++++|+..+..+. ... -.+.+||....+..|+.
T Consensus 124 ---dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~--~~~---g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 124 ---NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAEL--GVR---GAVNAFDLKTGELKWRA 192 (571)
T ss_dssp ---TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGG--TCC---CEEEEEETTTCCEEEEE
T ss_pred ---CCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCcc--CCC---CEEEEEECCCCcEEEEE
Confidence 356899999877 4875422110 0 1112234568888876432110 001 13456666544556764
No 40
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=86.81 E-value=11 Score=37.44 Aligned_cols=122 Identities=17% Similarity=0.226 Sum_probs=69.0
Q ss_pred eEEEECCEEEEEeecCCCCCccceEEEEECCCCc--eeeCCCCCCCC------CceeeEEEEeCCEEEEEecccCCCCCC
Q 020688 123 AAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDM------AHSHLGVVSDGRYIYIVSGQYGPQCRG 194 (322)
Q Consensus 123 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~p~------~r~~~~~~~~~~~iyv~GG~~~~~~~~ 194 (322)
+-++.++.||+... ...++.+|..+.+ |+.-...+... .....+.++.+++||+...
T Consensus 65 ~P~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-------- 129 (689)
T 1yiq_A 65 TPIVVDGVMYTTGP-------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-------- 129 (689)
T ss_dssp CCEEETTEEEEECG-------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--------
T ss_pred cCEEECCEEEEEcC-------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc--------
Confidence 34567999999764 2358999987765 87643322100 0112345678999988642
Q ss_pred CCceEEEEECCCCc--EEecCC-CCCC--CCCCeEEEECCEEEEEccCCCCCCCCCcceeEeEEeccccccccccc
Q 020688 195 PTSRTFVLDSETRK--WDSIPP-LPSP--RYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRT 265 (322)
Q Consensus 195 ~~~~~~~yD~~t~~--W~~~~~-~p~~--r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~~~~~~W~~ 265 (322)
...+.++|.+|.+ |+.-.. -+.. ....+.++.++++|+-.+.... ... -.+.++|....+..|+.
T Consensus 130 -dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~--~~~---g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 130 -DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEF--GVR---GYVTAYDAETGKEAWRF 199 (689)
T ss_dssp -TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTT--CCB---CEEEEEETTTCCEEEEE
T ss_pred -CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCcc--CCC---CEEEEEECCCCcEEEEe
Confidence 3568999998874 887543 1111 1122335678888774332111 111 14556776544556774
No 41
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=85.55 E-value=11 Score=32.37 Aligned_cols=64 Identities=6% Similarity=0.040 Sum_probs=41.4
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE--eCCEEEEEecccCCCCCCCCceEEEEECC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
++.+|+.++. ...+.+||+.+.+.......+. ... .++. .++.+|+.+.. ...+.++|+.
T Consensus 9 ~~~~~v~~~~------~~~v~~~d~~~~~~~~~~~~~~---~~~-~~~~s~dg~~l~~~~~~--------~~~i~~~d~~ 70 (331)
T 3u4y_A 9 SNFGIVVEQH------LRRISFFSTDTLEILNQITLGY---DFV-DTAITSDCSNVVVTSDF--------CQTLVQIETQ 70 (331)
T ss_dssp CCEEEEEEGG------GTEEEEEETTTCCEEEEEECCC---CEE-EEEECSSSCEEEEEEST--------TCEEEEEECS
T ss_pred CCEEEEEecC------CCeEEEEeCcccceeeeEEccC---Ccc-eEEEcCCCCEEEEEeCC--------CCeEEEEECC
Confidence 4678887753 2469999999988766444432 122 3443 24468887642 3478999998
Q ss_pred CCcE
Q 020688 206 TRKW 209 (322)
Q Consensus 206 t~~W 209 (322)
+.+-
T Consensus 71 ~~~~ 74 (331)
T 3u4y_A 71 LEPP 74 (331)
T ss_dssp SSSC
T ss_pred CCce
Confidence 8764
No 42
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=84.68 E-value=13 Score=33.45 Aligned_cols=74 Identities=9% Similarity=0.040 Sum_probs=38.4
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++.+|+.++.+ ..+.+||+.+.+.....+.. ..-.+++.. +++.+++++............+.+||+.+
T Consensus 223 ~~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~----~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~ 292 (433)
T 3bws_A 223 RDLVYCSNWIS------EDISVIDRKTKLEIRKTDKI----GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDK 292 (433)
T ss_dssp TTEEEEEETTT------TEEEEEETTTTEEEEECCCC----SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTT
T ss_pred CCEEEEEecCC------CcEEEEECCCCcEEEEecCC----CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCC
Confidence 44576665432 35899999887654432222 223333332 44333444433222110135789999988
Q ss_pred CcEEe
Q 020688 207 RKWDS 211 (322)
Q Consensus 207 ~~W~~ 211 (322)
.+-..
T Consensus 293 ~~~~~ 297 (433)
T 3bws_A 293 EKLID 297 (433)
T ss_dssp TEEEE
T ss_pred CcEEe
Confidence 75433
No 43
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=84.20 E-value=14 Score=31.78 Aligned_cols=68 Identities=13% Similarity=0.228 Sum_probs=41.2
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe--CCEEEEEecccCCCCCCCCceEEEEECC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
++++|+.++. ...++++|+.+.+....-+.+. ......++.. ++.+|+.+.. ...+.+||+.
T Consensus 10 ~~~~~v~~~~------~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~~~v~~~~--------~~~i~~~d~~ 73 (349)
T 1jmx_B 10 GHEYMIVTNY------PNNLHVVDVASDTVYKSCVMPD--KFGPGTAMMAPDNRTAYVLNNH--------YGDIYGIDLD 73 (349)
T ss_dssp TCEEEEEEET------TTEEEEEETTTTEEEEEEECSS--CCSSCEEEECTTSSEEEEEETT--------TTEEEEEETT
T ss_pred CCEEEEEeCC------CCeEEEEECCCCcEEEEEecCC--CCCCceeEECCCCCEEEEEeCC--------CCcEEEEeCC
Confidence 5788888764 2469999998887654323322 0012233333 4468887632 3578999998
Q ss_pred CCcEEe
Q 020688 206 TRKWDS 211 (322)
Q Consensus 206 t~~W~~ 211 (322)
+.+-..
T Consensus 74 t~~~~~ 79 (349)
T 1jmx_B 74 TCKNTF 79 (349)
T ss_dssp TTEEEE
T ss_pred CCcEEE
Confidence 876543
No 44
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=83.66 E-value=6.4 Score=34.38 Aligned_cols=105 Identities=13% Similarity=0.233 Sum_probs=57.3
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++++++.|+.+ ..+.+||..+.+++.+..+... ...-.+++.. ++.+++.|+.+ ..+..||..+
T Consensus 19 ~~~~l~~~~~d------~~v~i~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~~~~~d--------g~i~vwd~~~ 83 (372)
T 1k8k_C 19 DRTQIAICPNN------HEVHIYEKSGNKWVQVHELKEH-NGQVTGVDWAPDSNRIVTCGTD--------RNAYVWTLKG 83 (372)
T ss_dssp TSSEEEEECSS------SEEEEEEEETTEEEEEEEEECC-SSCEEEEEEETTTTEEEEEETT--------SCEEEEEEET
T ss_pred CCCEEEEEeCC------CEEEEEeCCCCcEEeeeeecCC-CCcccEEEEeCCCCEEEEEcCC--------CeEEEEECCC
Confidence 45666777642 3588999988876655444321 1222233333 55566666542 4578888888
Q ss_pred CcEEecCCCCCCCCCCeEEEE--CCEEEEEccCCCCCCCCCcceeEeE
Q 020688 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIA 252 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~Lyi~GG~~~~~~~~~~~~~~i~ 252 (322)
.++.....+.........+.+ ++++++.|+.+ ..+..|++.
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i~d~~ 126 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS-----RVISICYFE 126 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETT-----SSEEEEEEE
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCC-----CEEEEEEec
Confidence 877655332222222223333 46677777643 344556553
No 45
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=83.53 E-value=8.4 Score=33.56 Aligned_cols=64 Identities=11% Similarity=0.149 Sum_probs=37.4
Q ss_pred CEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-C--CEEEEEecccCCCCCCCCceEEEEECC
Q 020688 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-G--RYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
+.+++.|+.++ .+.+||..+.+|..+..+... ...-.+++.. + +.+++.|+. ...+..||..
T Consensus 69 ~~~l~s~~~dg------~v~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~--------d~~i~v~d~~ 133 (379)
T 3jrp_A 69 GTILASCSYDG------KVLIWKEENGRWSQIAVHAVH-SASVNSVQWAPHEYGPLLLVASS--------DGKVSVVEFK 133 (379)
T ss_dssp CSEEEEEETTS------CEEEEEEETTEEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEET--------TSEEEEEECC
T ss_pred CCEEEEeccCC------EEEEEEcCCCceeEeeeecCC-CcceEEEEeCCCCCCCEEEEecC--------CCcEEEEecC
Confidence 56667776532 488889888887665544321 2222333333 2 456666654 3467888887
Q ss_pred CC
Q 020688 206 TR 207 (322)
Q Consensus 206 t~ 207 (322)
+.
T Consensus 134 ~~ 135 (379)
T 3jrp_A 134 EN 135 (379)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 46
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=82.61 E-value=19 Score=29.72 Aligned_cols=90 Identities=13% Similarity=0.053 Sum_probs=49.8
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++.||+... ...+.+||+.+.......... ...-.++++. +++||+.... ...+.++|..+
T Consensus 77 ~g~l~v~~~-------~~~i~~~d~~~~~~~~~~~~~---~~~p~~i~~~~~g~l~v~~~~--------~~~i~~~~~~~ 138 (270)
T 1rwi_B 77 AGTVYVTDF-------NNRVVTLAAGSNNQTVLPFDG---LNYPEGLAVDTQGAVYVADRG--------NNRVVKLAAGS 138 (270)
T ss_dssp TCCEEEEET-------TTEEEEECTTCSCCEECCCCS---CSSEEEEEECTTCCEEEEEGG--------GTEEEEECTTC
T ss_pred CCCEEEEcC-------CCEEEEEeCCCceEeeeecCC---cCCCcceEECCCCCEEEEECC--------CCEEEEEECCC
Confidence 567888754 135899999887655443211 1223345554 6789987532 24688888776
Q ss_pred CcEEecCCCCCCCCCCeEEEE-CCEEEEEcc
Q 020688 207 RKWDSIPPLPSPRYSPATQLW-RGRLHVMGG 236 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~-~~~Lyi~GG 236 (322)
.......... ...-.+++.. +++||+...
T Consensus 139 ~~~~~~~~~~-~~~p~~i~~~~~g~l~v~~~ 168 (270)
T 1rwi_B 139 KTQTVLPFTG-LNDPDGVAVDNSGNVYVTDT 168 (270)
T ss_dssp CSCEECCCCS-CCSCCCEEECTTCCEEEEEG
T ss_pred ceeEeecccc-CCCceeEEEeCCCCEEEEEC
Confidence 6544332111 1112234443 578888754
No 47
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=82.06 E-value=7.9 Score=34.17 Aligned_cols=83 Identities=16% Similarity=0.061 Sum_probs=45.0
Q ss_pred ceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCE-EEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCC
Q 020688 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRY-IYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSP 222 (322)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~ 222 (322)
..++++|..+.++..+.. ..+ .......+.. +++ |+..+ ...... ...++++|+.+.+...+..++. ..
T Consensus 216 ~~l~~~d~~~~~~~~l~~-~~~-~~~~~~~~~spdg~~l~~~~-~~~~~~---~~~l~~~d~~~g~~~~l~~~~~--~~- 286 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKE-HAE-GESCTHEFWIPDGSAMAYVS-YFKGQT---DRVIYKANPETLENEEVMVMPP--CS- 286 (396)
T ss_dssp CCCEEEETTSCCCEESSC-CCT-TEEEEEEEECTTSSCEEEEE-EETTTC---CEEEEEECTTTCCEEEEEECCS--EE-
T ss_pred ceEEEEECCCCceeEeec-cCC-CccccceEECCCCCEEEEEe-cCCCCc---cceEEEEECCCCCeEEeeeCCC--CC-
Confidence 468999998888777655 211 1122222222 444 44443 222211 2459999999888777654442 11
Q ss_pred eEEEE-CCEEEEEcc
Q 020688 223 ATQLW-RGRLHVMGG 236 (322)
Q Consensus 223 ~~~~~-~~~Lyi~GG 236 (322)
....- +++++++.+
T Consensus 287 ~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 287 HLMSNFDGSLMVGDG 301 (396)
T ss_dssp EEEECSSSSEEEEEE
T ss_pred CCccCCCCceEEEec
Confidence 22333 677666654
No 48
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=81.04 E-value=16 Score=33.05 Aligned_cols=94 Identities=13% Similarity=0.023 Sum_probs=47.9
Q ss_pred EEECCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEEC
Q 020688 125 IQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (322)
Q Consensus 125 ~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~ 204 (322)
...++..++.|+.+ ..+.+||..+.+-.. .+.. ....-.++... +.+++.|+.+ ..+..||.
T Consensus 125 ~~~~g~~l~sg~~d------g~i~vwd~~~~~~~~--~~~~-h~~~v~~~~~~-~~~l~s~~~d--------g~i~vwd~ 186 (445)
T 2ovr_B 125 LQFCGNRIVSGSDD------NTLKVWSAVTGKCLR--TLVG-HTGGVWSSQMR-DNIIISGSTD--------RTLKVWNA 186 (445)
T ss_dssp EEEETTEEEEEETT------SCEEEEETTTCCEEE--ECCC-CSSCEEEEEEE-TTEEEEEETT--------SCEEEEET
T ss_pred EEEcCCEEEEEECC------CcEEEEECCCCcEEE--EEcC-CCCCEEEEEec-CCEEEEEeCC--------CeEEEEEC
Confidence 34455666677653 248889987765332 2221 01222333333 4456666542 45788998
Q ss_pred CCCcEEecCCCCCCCCCCeEEEECCEEEEEccCC
Q 020688 205 ETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSK 238 (322)
Q Consensus 205 ~t~~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~ 238 (322)
.+.+-... +.........+.+++..++.|+.+
T Consensus 187 ~~~~~~~~--~~~h~~~v~~~~~~~~~l~s~s~d 218 (445)
T 2ovr_B 187 ETGECIHT--LYGHTSTVRCMHLHEKRVVSGSRD 218 (445)
T ss_dssp TTTEEEEE--ECCCSSCEEEEEEETTEEEEEETT
T ss_pred CcCcEEEE--ECCCCCcEEEEEecCCEEEEEeCC
Confidence 87643322 222222233344455566666643
No 49
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=80.08 E-value=30 Score=30.23 Aligned_cols=105 Identities=9% Similarity=0.198 Sum_probs=55.1
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++++.+.||.++ .+.++|..+++|.....+.......-.+++.. ++...+.|+.+ ..+..+|..+
T Consensus 27 ~g~~las~~~D~------~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D--------~~v~iw~~~~ 92 (345)
T 3fm0_A 27 AGTLLASCGGDR------RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD--------ATTCIWKKNQ 92 (345)
T ss_dssp TSSCEEEEETTS------CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT--------SCEEEEEECC
T ss_pred CCCEEEEEcCCC------eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC--------CcEEEEEccC
Confidence 566777777542 37788888887754322211112222233332 56666677653 3466777777
Q ss_pred CcEEecCCCCCCCCCCeEEEE--CCEEEEEccCCCCCCCCCcceeEe
Q 020688 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~Lyi~GG~~~~~~~~~~~~~~i 251 (322)
..+..+..+.........+.+ ++++++.|+.+ ..+..|++
T Consensus 93 ~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D-----~~v~iwd~ 134 (345)
T 3fm0_A 93 DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD-----KSVWVWEV 134 (345)
T ss_dssp C-EEEEEEECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEE
T ss_pred CCeEEEEEccCCCCCceEEEEeCCCCEEEEEECC-----CeEEEEEC
Confidence 766554433322222233333 56777777754 34556665
No 50
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=79.79 E-value=14 Score=36.64 Aligned_cols=96 Identities=10% Similarity=0.108 Sum_probs=54.9
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-C--CEEEEEecccCCCCCCCCceEEEEEC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-G--RYIYIVSGQYGPQCRGPTSRTFVLDS 204 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~~~yD~ 204 (322)
+++.++.||.+ ..+.+||..+.++..+..+... ...-.+++.. + +.+++.|+.+ ..+..||.
T Consensus 20 dg~~latg~~d------g~I~vwd~~~~~~~~~~~l~~h-~~~V~~l~~s~~~~~~~l~s~s~D--------g~I~vwd~ 84 (753)
T 3jro_A 20 YGKRLATCSSD------KTIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCSYD--------GKVLIWKE 84 (753)
T ss_dssp SSCCEEEEETT------TEEEEEEEETTEEEEEEEECCC-SSCEEEEEECCTTSCSEEEEEETT--------SCEEEEEE
T ss_pred CCCeEEEEECC------CcEEEEecCCCCCccceeccCC-cCceEEEEecCCCCCCEEEEEeCC--------CeEEEEEC
Confidence 35566667643 2478888877777665544421 1222233332 2 5666677653 45788898
Q ss_pred CCCcEEecCCCCCCCCCCeEEEEC----CEEEEEccCC
Q 020688 205 ETRKWDSIPPLPSPRYSPATQLWR----GRLHVMGGSK 238 (322)
Q Consensus 205 ~t~~W~~~~~~p~~r~~~~~~~~~----~~Lyi~GG~~ 238 (322)
.+.+|..+..+.........+.+. +.+++.|+.+
T Consensus 85 ~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d 122 (753)
T 3jro_A 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD 122 (753)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred CCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC
Confidence 888887765444333333334442 6677777754
No 51
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=79.30 E-value=14 Score=31.42 Aligned_cols=93 Identities=9% Similarity=0.049 Sum_probs=46.8
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
+++.++.|+.+ ..+.+||..+.+......+... ...-.+++.. ++..++.|+. ...+..||..+
T Consensus 108 ~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~--------dg~v~~~d~~~ 172 (337)
T 1gxr_A 108 DGCTLIVGGEA------STLSIWDLAAPTPRIKAELTSS-APACYALAISPDSKVCFSCCS--------DGNIAVWDLHN 172 (337)
T ss_dssp TSSEEEEEESS------SEEEEEECCCC--EEEEEEECS-SSCEEEEEECTTSSEEEEEET--------TSCEEEEETTT
T ss_pred CCCEEEEEcCC------CcEEEEECCCCCcceeeecccC-CCceEEEEECCCCCEEEEEeC--------CCcEEEEeCCC
Confidence 45566666643 3588999988775443333221 1122233332 5556666654 24588899887
Q ss_pred CcEEecCCCCCCCCCCeEEEE--CCEEEEEccC
Q 020688 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGS 237 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~Lyi~GG~ 237 (322)
.+-...- .........+.+ ++.+++.|+.
T Consensus 173 ~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~ 203 (337)
T 1gxr_A 173 QTLVRQF--QGHTDGASCIDISNDGTKLWTGGL 203 (337)
T ss_dssp TEEEEEE--CCCSSCEEEEEECTTSSEEEEEET
T ss_pred Cceeeee--ecccCceEEEEECCCCCEEEEEec
Confidence 7543321 111122222333 5666667664
No 52
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=79.18 E-value=26 Score=32.94 Aligned_cols=59 Identities=12% Similarity=0.189 Sum_probs=37.5
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECCCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~ 207 (322)
++++|+|-| +..|+||..+++.... ..+. .+. .-++...++++|.+-| +..++||+.++
T Consensus 158 ~~~~yfFkG--------~~yw~yd~~~~~~~~~-~w~g-i~~-iDAA~~~~g~~YfFkG----------~~y~rfd~~~~ 216 (460)
T 1qhu_A 158 DEGILFFQG--------NRKWFWDLTTGTKKER-SWPA-VGN-CTSALRWLGRYYCFQG----------NQFLRFNPVSG 216 (460)
T ss_dssp SSEEEEEET--------TEEEEEETTTTEEEEE-CCTT-SCC-CSEEEEETTEEEEEET----------TEEEEECTTTC
T ss_pred CCeEEEEec--------ccEEEEecccceeecc-cCCC-CCc-cchheeeCCceEEEEC----------CEEEEEcCccC
Confidence 678999987 4589999988765431 1111 122 2344446799999976 34677776553
No 53
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=79.00 E-value=25 Score=31.78 Aligned_cols=95 Identities=9% Similarity=0.008 Sum_probs=52.1
Q ss_pred EEEECCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEE
Q 020688 124 AIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLD 203 (322)
Q Consensus 124 ~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD 203 (322)
+...++..++.|+.+ ..+.+||..+.+-... +.. ......+...++.+.+.|+.+ ..+.+||
T Consensus 138 ~~~~d~~~l~~g~~d------g~i~iwd~~~~~~~~~--~~~--h~~~v~~l~~~~~~l~sg~~d--------g~i~vwd 199 (435)
T 1p22_A 138 CLQYDDQKIVSGLRD------NTIKIWDKNTLECKRI--LTG--HTGSVLCLQYDERVIITGSSD--------STVRVWD 199 (435)
T ss_dssp EEECCSSEEEEEESS------SCEEEEESSSCCEEEE--ECC--CSSCEEEEECCSSEEEEEETT--------SCEEEEE
T ss_pred EEEECCCEEEEEeCC------CeEEEEeCCCCeEEEE--EcC--CCCcEEEEEECCCEEEEEcCC--------CeEEEEE
Confidence 334477777888753 2488899877654332 221 111122233467777777653 4578899
Q ss_pred CCCCcEEecCCCCCCCCCCeEEEECCEEEEEccCC
Q 020688 204 SETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSK 238 (322)
Q Consensus 204 ~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~ 238 (322)
..+.+-... +.........+.+.+.+++.|+.+
T Consensus 200 ~~~~~~~~~--~~~h~~~v~~l~~~~~~l~s~s~d 232 (435)
T 1p22_A 200 VNTGEMLNT--LIHHCEAVLHLRFNNGMMVTCSKD 232 (435)
T ss_dssp SSSCCEEEE--ECCCCSCEEEEECCTTEEEEEETT
T ss_pred CCCCcEEEE--EcCCCCcEEEEEEcCCEEEEeeCC
Confidence 887754332 222222333445566677777753
No 54
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=78.11 E-value=24 Score=34.30 Aligned_cols=124 Identities=15% Similarity=0.215 Sum_probs=66.9
Q ss_pred ceEEEECCEEEEEeecCCCCCccceEEEEEC-CCCc--eeeCCCCCCC-CC-----ceeeEEEE--eCCE----EEEEec
Q 020688 122 GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNF-TDNK--WVDRFDMPKD-MA-----HSHLGVVS--DGRY----IYIVSG 186 (322)
Q Consensus 122 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~-~t~~--W~~~~~~~~p-~~-----r~~~~~~~--~~~~----iyv~GG 186 (322)
.+-++.++.||+.+.+ ...++.+|. .+.+ |+.-...... .+ ....+.++ .+++ ||+...
T Consensus 56 ~tP~v~~g~vyv~~~~------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~ 129 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSF------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL 129 (599)
T ss_dssp SCCEEETTEEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT
T ss_pred eccEEECCEEEEEeCC------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC
Confidence 3445679999998652 134899998 6655 8874332210 00 11233455 6777 887532
Q ss_pred ccCCCCCCCCceEEEEECCCCc--EEecCCCCCC--CCCCeEEEECCEEEEEccCCCCCCCCCcceeEeEEecccccccc
Q 020688 187 QYGPQCRGPTSRTFVLDSETRK--WDSIPPLPSP--RYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKA 262 (322)
Q Consensus 187 ~~~~~~~~~~~~~~~yD~~t~~--W~~~~~~p~~--r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~~~~~~ 262 (322)
...+.++|.+|.+ |+.-..-+.. ....+-++.++++|+-.+..+ +... -.+..||....+..
T Consensus 130 ---------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e--~g~~---g~v~A~D~~TG~~~ 195 (599)
T 1w6s_A 130 ---------DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAE--LGVR---GYLTAYDVKTGEQV 195 (599)
T ss_dssp ---------TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGG--GTCC---CEEEEEETTTCCEE
T ss_pred ---------CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccc--cCCC---CeEEEEECCCCcEE
Confidence 3568999998874 8864221110 111223457888876443111 0011 13556676544556
Q ss_pred ccc
Q 020688 263 WRT 265 (322)
Q Consensus 263 W~~ 265 (322)
|+.
T Consensus 196 W~~ 198 (599)
T 1w6s_A 196 WRA 198 (599)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 55
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=77.31 E-value=29 Score=28.57 Aligned_cols=91 Identities=14% Similarity=0.061 Sum_probs=48.7
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
+++||+.... ...+.+||..+........... ..-.++++. +++||+.... ...+.+||+.+
T Consensus 118 ~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~~~~---~~p~~i~~~~~g~l~v~~~~--------~~~i~~~~~~~ 180 (270)
T 1rwi_B 118 QGAVYVADRG------NNRVVKLAAGSKTQTVLPFTGL---NDPDGVAVDNSGNVYVTDTD--------NNRVVKLEAES 180 (270)
T ss_dssp TCCEEEEEGG------GTEEEEECTTCCSCEECCCCSC---CSCCCEEECTTCCEEEEEGG--------GTEEEEECTTT
T ss_pred CCCEEEEECC------CCEEEEEECCCceeEeeccccC---CCceeEEEeCCCCEEEEECC--------CCEEEEEecCC
Confidence 5678887532 2358888876665443221111 112234444 5789987542 24689999887
Q ss_pred CcEEecCCCCCCCCCCeEEEE-CCEEEEEcc
Q 020688 207 RKWDSIPPLPSPRYSPATQLW-RGRLHVMGG 236 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~-~~~Lyi~GG 236 (322)
..-........ ....+++.. ++.||+...
T Consensus 181 ~~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~ 210 (270)
T 1rwi_B 181 NNQVVLPFTDI-TAPWGIAVDEAGTVYVTEH 210 (270)
T ss_dssp CCEEECCCSSC-CSEEEEEECTTCCEEEEET
T ss_pred CceEeecccCC-CCceEEEECCCCCEEEEEC
Confidence 66444321111 111233333 458888764
No 56
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=77.18 E-value=23 Score=32.11 Aligned_cols=90 Identities=7% Similarity=0.056 Sum_probs=46.0
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECCCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~ 207 (322)
++..++.|+.+ ..+.+||..+.+-.. .+.. ...........+...+.|+. ...+.+||..+.
T Consensus 321 ~~~~l~sg~~d------g~i~vwd~~~~~~~~--~~~~--h~~~v~~~~~~~~~l~s~s~--------dg~v~vwd~~~~ 382 (464)
T 3v7d_B 321 ERKRCISASMD------TTIRIWDLENGELMY--TLQG--HTALVGLLRLSDKFLVSAAA--------DGSIRGWDANDY 382 (464)
T ss_dssp TTTEEEEEETT------SCEEEEETTTTEEEE--EECC--CSSCEEEEEECSSEEEEEET--------TSEEEEEETTTC
T ss_pred CCCEEEEEeCC------CcEEEEECCCCcEEE--EEeC--CCCcEEEEEEcCCEEEEEeC--------CCcEEEEECCCC
Confidence 44555666643 248889987765332 2221 11122233344556666654 346888998876
Q ss_pred cEEecCCCCCCCCCCeEEEECCEEEEEcc
Q 020688 208 KWDSIPPLPSPRYSPATQLWRGRLHVMGG 236 (322)
Q Consensus 208 ~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG 236 (322)
.-...... ...........++.+++.|+
T Consensus 383 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 383 SRKFSYHH-TNLSAITTFYVSDNILVSGS 410 (464)
T ss_dssp CEEEEEEC-TTCCCEEEEEECSSEEEEEE
T ss_pred ceeeeecC-CCCccEEEEEeCCCEEEEec
Confidence 42222111 11222334455777777766
No 57
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=76.50 E-value=26 Score=33.84 Aligned_cols=74 Identities=23% Similarity=0.410 Sum_probs=47.3
Q ss_pred eEEEECCEEEEEeecCCCCCccceEEEEECCCCc--eeeCCCCCCCC-C---ceeeEEEEeCCEEEEEecccCCCCCCCC
Q 020688 123 AAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDM-A---HSHLGVVSDGRYIYIVSGQYGPQCRGPT 196 (322)
Q Consensus 123 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~p~-~---r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 196 (322)
+-++.++.||+.... +.++.+|..+.+ |+.-...+... + ....+.++.+++||+... .
T Consensus 63 ~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~---------d 126 (582)
T 1flg_A 63 QAIVSDGVIYVTASY-------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL---------D 126 (582)
T ss_dssp CCEEETTEEEEEETT-------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET---------T
T ss_pred ccEEECCEEEEEcCC-------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC---------C
Confidence 345679999998652 238899987665 87643322100 0 012345678999988532 3
Q ss_pred ceEEEEECCCCc--EEec
Q 020688 197 SRTFVLDSETRK--WDSI 212 (322)
Q Consensus 197 ~~~~~yD~~t~~--W~~~ 212 (322)
..+.++|.+|.+ |+.-
T Consensus 127 g~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 127 ASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp TEEEEEESSSCCEEEEEE
T ss_pred CEEEEEECCCCCEEeeec
Confidence 568999998874 8864
No 58
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=76.27 E-value=32 Score=28.49 Aligned_cols=146 Identities=12% Similarity=0.061 Sum_probs=68.5
Q ss_pred eEEEECCEEEEEeecCCCCCccceEEEEECCCCceee--C----CCCCCCCCceeeEEEE-eCCEEEEEecccCCCCCCC
Q 020688 123 AAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD--R----FDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGP 195 (322)
Q Consensus 123 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~--~----~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~ 195 (322)
+++.+++++|+|=| ..+|+++.....+.. + +.+|. ....+... .++++|++-|
T Consensus 28 Ai~~~~g~~y~Fkg--------~~~wr~~~~~~~~~p~~I~~~wp~Lp~---~iDAa~~~~~~~~iyfFkG--------- 87 (207)
T 1pex_A 28 AITSLRGETMIFKD--------RFFWRLHPQQVDAELFLTKSFWPELPN---RIDAAYEHPSHDLIFIFRG--------- 87 (207)
T ss_dssp EEEEETTEEEEEET--------TEEEEECSSSSCCEEEEHHHHCTTSCS---SCCEEEEETTTTEEEEEET---------
T ss_pred EEEeCCCcEEEEEC--------CEEEEEeCCCcCCCceehhHhccCCCC---CccEEEEeccCCcEEEEcc---------
Confidence 34567999999976 347777765433321 1 22332 22222222 2689999966
Q ss_pred CceEEEEECCCCcE---EecCC--CCCCC-CCCeEEEE--CCEEEEEccCCCCCCCCCcceeEeEEeccccccccccccc
Q 020688 196 TSRTFVLDSETRKW---DSIPP--LPSPR-YSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEI 267 (322)
Q Consensus 196 ~~~~~~yD~~t~~W---~~~~~--~p~~r-~~~~~~~~--~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~~~~~~W~~~~ 267 (322)
+.+++|+..+-.- ..+.. +|... .--++..+ ++++|+|-|..--++..... .++.--|+.....|..+
T Consensus 88 -~~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG~~ywr~d~~~~--~~d~gyPr~i~~~~~Gi- 163 (207)
T 1pex_A 88 -RKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSGNQVWRYDDTNH--IMDKDYPRLIEEDFPGI- 163 (207)
T ss_dssp -TEEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEETTEEEEEETTTT--EECSSCCCBHHHHSTTS-
T ss_pred -CEEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeCCEEEEEeCcCc--cccCCCCccHHHcCCCC-
Confidence 3466776432111 12222 33211 12233444 47999997732111111000 01000011112244332
Q ss_pred CCCCCcceEEEEeCCEEEEEccccCCCC
Q 020688 268 PIPRGGPHRFAGFPHVIYLSLVSSVEDL 295 (322)
Q Consensus 268 p~pr~~~~~~~v~~~~iyi~GG~~~e~~ 295 (322)
|..- .++...++++|+|-|...-+|
T Consensus 164 --p~~i-DaAf~~~g~~YfFkg~~y~rf 188 (207)
T 1pex_A 164 --GDKV-DAVYEKNGYIYFFNGPIQFEY 188 (207)
T ss_dssp --CSCC-SEEEEETTEEEEEETTEEEEE
T ss_pred --CCCc-cEEEEcCCcEEEEECCEEEEE
Confidence 3222 455567999999988654333
No 59
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=75.75 E-value=2.7 Score=37.24 Aligned_cols=96 Identities=13% Similarity=0.185 Sum_probs=47.1
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++++++.|+.+ ..+.+||..+..|..+..+... ...-.+++.. ++.+++.|+.+ ..+..||..+
T Consensus 22 ~g~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~s~d--------~~v~vwd~~~ 86 (377)
T 3dwl_C 22 QRTEFVTTTAT------NQVELYEQDGNGWKHARTFSDH-DKIVTCVDWAPKSNRIVTCSQD--------RNAYVYEKRP 86 (377)
T ss_dssp SSSEEECCCSS------SCBCEEEEETTEEEECCCBCCC-SSCEEEEEECTTTCCEEEEETT--------SSEEEC----
T ss_pred CCCEEEEecCC------CEEEEEEccCCceEEEEEEecC-CceEEEEEEeCCCCEEEEEeCC--------CeEEEEEcCC
Confidence 45666666643 2367788888888776666531 1222233332 45666666643 3577888877
Q ss_pred Cc-EEecCCCCCCCCCCeEEEE--CCEEEEEccCC
Q 020688 207 RK-WDSIPPLPSPRYSPATQLW--RGRLHVMGGSK 238 (322)
Q Consensus 207 ~~-W~~~~~~p~~r~~~~~~~~--~~~Lyi~GG~~ 238 (322)
.+ |.....+.........+.+ ++++++.|+.+
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 121 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGA 121 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESS
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEecC
Confidence 66 4443322222222222333 46667777653
No 60
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=75.41 E-value=17 Score=29.91 Aligned_cols=72 Identities=10% Similarity=0.042 Sum_probs=38.8
Q ss_pred CEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE-eCC-EEEEEecccCCCCCCCCceEEEEECCC
Q 020688 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGR-YIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
..|++.++.++. -.++.+|..+.+...+..... .. ..++. -++ .|++.+..++ ...++.++..+
T Consensus 141 ~~l~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~--~~--~~~~~s~dg~~l~~~~~~~~------~~~i~~~~~~~ 206 (297)
T 2ojh_A 141 KSFTYCGIRDQV----FDIYSMDIDSGVETRLTHGEG--RN--DGPDYSPDGRWIYFNSSRTG------QMQIWRVRVDG 206 (297)
T ss_dssp SEEEEEEEETTE----EEEEEEETTTCCEEECCCSSS--CE--EEEEECTTSSEEEEEECTTS------SCEEEEEETTS
T ss_pred CEEEEEECCCCc----eEEEEEECCCCcceEcccCCC--cc--ccceECCCCCEEEEEecCCC------CccEEEECCCC
Confidence 345545544321 247888888777766554332 11 22222 244 4555443322 35688888877
Q ss_pred CcEEecCC
Q 020688 207 RKWDSIPP 214 (322)
Q Consensus 207 ~~W~~~~~ 214 (322)
.....+..
T Consensus 207 ~~~~~~~~ 214 (297)
T 2ojh_A 207 SSVERITD 214 (297)
T ss_dssp SCEEECCC
T ss_pred CCcEEEec
Confidence 77777643
No 61
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=74.81 E-value=39 Score=28.86 Aligned_cols=82 Identities=16% Similarity=0.169 Sum_probs=42.9
Q ss_pred ceEEEEECCCCceeeCCCCCCC-CCceeeEEEEe--CCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCC
Q 020688 145 SHVDVYNFTDNKWVDRFDMPKD-MAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYS 221 (322)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~p-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~ 221 (322)
..+.++|+.+.+-......+.. ......+++.. ++.||+.... ...+.+||+.+.+-...-+.+.+.
T Consensus 206 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--------~~~v~~~d~~~~~~~~~~~~~~~~-- 275 (353)
T 3vgz_A 206 GELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK--------AAEVLVVDTRNGNILAKVAAPESL-- 275 (353)
T ss_dssp SEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS--------SSEEEEEETTTCCEEEEEECSSCC--
T ss_pred CeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC--------CCEEEEEECCCCcEEEEEEcCCCc--
Confidence 3578899887764332222110 01222233333 5678876521 367999999887755443333331
Q ss_pred CeEEEE-CCEEEEEcc
Q 020688 222 PATQLW-RGRLHVMGG 236 (322)
Q Consensus 222 ~~~~~~-~~~Lyi~GG 236 (322)
.....- ++.||+.+.
T Consensus 276 ~~~~s~dg~~l~v~~~ 291 (353)
T 3vgz_A 276 AVLFNPARNEAYVTHR 291 (353)
T ss_dssp CEEEETTTTEEEEEET
T ss_pred eEEECCCCCEEEEEEC
Confidence 122222 345887764
No 62
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=74.22 E-value=25 Score=31.82 Aligned_cols=51 Identities=20% Similarity=0.196 Sum_probs=27.8
Q ss_pred CCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCeEEEECCEEEEEccCC
Q 020688 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSK 238 (322)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~ 238 (322)
++...+.|+. ...+..||..+.+-... +.........+.+++.+++.|+.+
T Consensus 265 ~~~~l~s~~~--------dg~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~g~~d 315 (435)
T 1p22_A 265 DDKYIVSASG--------DRTIKVWNTSTCEFVRT--LNGHKRGIACLQYRDRLVVSGSSD 315 (435)
T ss_dssp ETTEEEEEET--------TSEEEEEETTTCCEEEE--EECCSSCEEEEEEETTEEEEEETT
T ss_pred CCCEEEEEeC--------CCeEEEEECCcCcEEEE--EcCCCCcEEEEEeCCCEEEEEeCC
Confidence 4555555553 34688899887653222 112222233445567777777753
No 63
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=73.18 E-value=17 Score=31.30 Aligned_cols=57 Identities=14% Similarity=0.174 Sum_probs=33.9
Q ss_pred ceEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECCCCcEEec
Q 020688 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSI 212 (322)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~ 212 (322)
+.+.+||+.+.+.....+.+. + ...+....++.+|+.+.. ...+.++|+.+.+-...
T Consensus 253 ~~v~~~d~~~~~~~~~~~~~~--~-~~~~~s~dg~~l~v~~~~--------~~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 253 AEVLVVDTRNGNILAKVAAPE--S-LAVLFNPARNEAYVTHRQ--------AGKVSVIDAKSYKVVKT 309 (353)
T ss_dssp SEEEEEETTTCCEEEEEECSS--C-CCEEEETTTTEEEEEETT--------TTEEEEEETTTTEEEEE
T ss_pred CEEEEEECCCCcEEEEEEcCC--C-ceEEECCCCCEEEEEECC--------CCeEEEEECCCCeEEEE
Confidence 468889988877554333433 2 122222235568887542 35789999988765443
No 64
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=73.04 E-value=40 Score=28.13 Aligned_cols=94 Identities=15% Similarity=0.088 Sum_probs=50.2
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++++|+.... ...+.+||+..+....+..... ...-.++++. ++.||+.... ...+.+||+..
T Consensus 131 ~g~l~v~~~~------~~~i~~~~~~g~~~~~~~~~~~--~~~p~~i~~~~~g~l~v~~~~--------~~~i~~~~~~g 194 (286)
T 1q7f_A 131 KGRIIVVECK------VMRVIIFDQNGNVLHKFGCSKH--LEFPNGVVVNDKQEIFISDNR--------AHCVKVFNYEG 194 (286)
T ss_dssp TSCEEEEETT------TTEEEEECTTSCEEEEEECTTT--CSSEEEEEECSSSEEEEEEGG--------GTEEEEEETTC
T ss_pred CCCEEEEECC------CCEEEEEcCCCCEEEEeCCCCc--cCCcEEEEECCCCCEEEEECC--------CCEEEEEcCCC
Confidence 5678887532 2458999987655444321111 1122344443 5789987642 35789999876
Q ss_pred CcEEecCCCCCCCCCCeEEEE-CCEEEEEccC
Q 020688 207 RKWDSIPPLPSPRYSPATQLW-RGRLHVMGGS 237 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~-~~~Lyi~GG~ 237 (322)
..-..+..-.......++++. +++||+....
T Consensus 195 ~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~ 226 (286)
T 1q7f_A 195 QYLRQIGGEGITNYPIGVGINSNGEILIADNH 226 (286)
T ss_dssp CEEEEESCTTTSCSEEEEEECTTCCEEEEECS
T ss_pred CEEEEEccCCccCCCcEEEECCCCCEEEEeCC
Confidence 554444321000111233332 5788888653
No 65
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=72.50 E-value=15 Score=36.55 Aligned_cols=64 Identities=11% Similarity=0.135 Sum_probs=37.7
Q ss_pred CEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-C--CEEEEEecccCCCCCCCCceEEEEECC
Q 020688 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-G--RYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
+.+++.|+.++ .+.+||..+.+|..+..+... ...-.+++.. + +.+++.|+.+ ..+..||..
T Consensus 67 ~~~l~s~s~Dg------~I~vwd~~~~~~~~~~~~~~h-~~~V~~v~~sp~~~~~~l~sgs~d--------g~I~vwdl~ 131 (753)
T 3jro_A 67 GTILASCSYDG------KVLIWKEENGRWSQIAVHAVH-SASVNSVQWAPHEYGPLLLVASSD--------GKVSVVEFK 131 (753)
T ss_dssp CSEEEEEETTS------CEEEEEEETTEEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETT--------SEEEEEECC
T ss_pred CCEEEEEeCCC------eEEEEECCCCcccccccccCC-CCCeEEEEECCCCCCCEEEEEeCC--------CcEEEEEee
Confidence 56667777532 388889888887665544321 2222233332 2 5667777642 467788877
Q ss_pred CC
Q 020688 206 TR 207 (322)
Q Consensus 206 t~ 207 (322)
+.
T Consensus 132 ~~ 133 (753)
T 3jro_A 132 EN 133 (753)
T ss_dssp SS
T ss_pred cC
Confidence 65
No 66
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=71.95 E-value=50 Score=28.82 Aligned_cols=114 Identities=15% Similarity=0.141 Sum_probs=58.8
Q ss_pred CCCEEEcCCCCCCcccceEEEE-CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEE
Q 020688 106 DLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIV 184 (322)
Q Consensus 106 ~~~W~~~~~~p~~R~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~ 184 (322)
...|+++.. +....-.++... .+.+|++|-. ..+++-+-.-.+|+.+.....+......++...++.+|++
T Consensus 24 g~~W~~~~~-~~~~~~~~v~~~~~~~~~~~G~~-------g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~ 95 (327)
T 2xbg_A 24 YNPWEAIQL-PTTATILDMSFIDRHHGWLVGVN-------ATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIV 95 (327)
T ss_dssp SCCEEEEEC-SCSSCEEEEEESSSSCEEEEETT-------TEEEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEE
T ss_pred CCCceEeec-CCCCcEEEEEECCCCcEEEEcCC-------CeEEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEE
Confidence 578998853 332222233222 4678886531 2254443345689987542211122344555567889987
Q ss_pred ecccCCCCCCCCceEEEEECCCCcEEecCCCC-CCCCCCeEE-EECCEEEEEcc
Q 020688 185 SGQYGPQCRGPTSRTFVLDSETRKWDSIPPLP-SPRYSPATQ-LWRGRLHVMGG 236 (322)
Q Consensus 185 GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p-~~r~~~~~~-~~~~~Lyi~GG 236 (322)
|.. ..+++-+-.-.+|+.+...+ .+.....++ .-++++|+.|.
T Consensus 96 g~~---------g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 140 (327)
T 2xbg_A 96 GEP---------PIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN 140 (327)
T ss_dssp EET---------TEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET
T ss_pred ECC---------CeEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC
Confidence 521 23443322346899986421 121122333 34688888874
No 67
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=71.56 E-value=40 Score=27.53 Aligned_cols=132 Identities=17% Similarity=0.259 Sum_probs=67.0
Q ss_pred eEEEECCEEEEEeecCCCCCccceEEEEECCCC--ceee--C----CCCCCCCCceeeEEEEe--CCEEEEEecccCCCC
Q 020688 123 AAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDN--KWVD--R----FDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQC 192 (322)
Q Consensus 123 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~--~W~~--~----~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 192 (322)
+++.+++++|+|=| +.+|+++.... .... + +.+|. .-. ++... ++++|++-|
T Consensus 11 Ai~~~~g~~yfFkg--------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~---~ID-Aa~~~~~~~~~yfFkG------ 72 (195)
T 1itv_A 11 AIAEIGNQLYLFKD--------GKYWRFSEGRGSRPQGPFLIADKWPALPR---KLD-SVFEEPLSKKLFFFSG------ 72 (195)
T ss_dssp EEEEETTEEEEEET--------TEEEEECCSSSCCCEEEEEHHHHCTTSCS---SCS-EEEECTTTCCEEEEET------
T ss_pred EEEEeCCEEEEEEC--------CEEEEEECCccccCCCcEEhhhccCCCCC---Ccc-EEEEECCCCeEEEEeC------
Confidence 45567999999977 34788776542 2211 1 22332 112 22222 688999976
Q ss_pred CCCCceEEEEECCCCcE-EecC--CCCCC--CCCCeEEEECCEEEEEccCCCCCCCCCcceeEeEEeccc----------
Q 020688 193 RGPTSRTFVLDSETRKW-DSIP--PLPSP--RYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGK---------- 257 (322)
Q Consensus 193 ~~~~~~~~~yD~~t~~W-~~~~--~~p~~--r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~---------- 257 (322)
+..++|+..+..- ..+. .+|.. .-..+..-.++++|+|=|..- | +||..
T Consensus 73 ----~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg~~y---------w---r~d~~~~~~~~gyPr 136 (195)
T 1itv_A 73 ----RQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSGRRL---------W---RFDVKAQMVDPRSAS 136 (195)
T ss_dssp ----TEEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEETTEE---------E---EEETTTTEECGGGCE
T ss_pred ----CEEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeCCEE---------E---EEeCCcccccCCCcc
Confidence 3467776542111 1111 23331 222222223689999976321 1 23321
Q ss_pred ccccccccccCCCCCcceEEEEeCCEEEEEccccC
Q 020688 258 ALEKAWRTEIPIPRGGPHRFAGFPHVIYLSLVSSV 292 (322)
Q Consensus 258 ~~~~~W~~~~p~pr~~~~~~~v~~~~iyi~GG~~~ 292 (322)
...+.|..+ |..- .++...++.+|+|-|...
T Consensus 137 ~i~~~w~Gv---p~~i-daa~~~~g~~Yffkg~~y 167 (195)
T 1itv_A 137 EVDRMFPGV---PLDT-HDVFQFREKAYFCQDRFY 167 (195)
T ss_dssp EHHHHSTTS---CSSC-SEEEEETTEEEEEETTEE
T ss_pred ChhhcCCCC---CCCC-CEEEEeCCeEEEEeCCEE
Confidence 112245433 3222 466666899999988543
No 68
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=70.98 E-value=37 Score=29.39 Aligned_cols=99 Identities=6% Similarity=0.110 Sum_probs=49.8
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceee-CCCCCCCCCceeeEEEE-eCCEEEEEecccCCCCCCCCceEEEEECC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD-RFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~-~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
+++.++.|+.+ ..+.+||..+.+-.. +..... .-.+++. -++.+++.|+.+ ..+..||..
T Consensus 175 dg~~lasg~~d------g~i~iwd~~~~~~~~~~~~h~~----~v~~l~~spd~~~l~s~s~d--------g~i~iwd~~ 236 (321)
T 3ow8_A 175 DGKYLASGAID------GIINIFDIATGKLLHTLEGHAM----PIRSLTFSPDSQLLVTASDD--------GYIKIYDVQ 236 (321)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTEEEEEECCCSS----CCCEEEECTTSCEEEEECTT--------SCEEEEETT
T ss_pred CCCEEEEEcCC------CeEEEEECCCCcEEEEEcccCC----ceeEEEEcCCCCEEEEEcCC--------CeEEEEECC
Confidence 45566666643 248889988775432 211111 1122333 256667777643 457889987
Q ss_pred CCcEEecCCCCCCCCCCeEEEE--CCEEEEEccCCCCCCCCCcceeEe
Q 020688 206 TRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 206 t~~W~~~~~~p~~r~~~~~~~~--~~~Lyi~GG~~~~~~~~~~~~~~i 251 (322)
+.+-... +.........+.+ ++++++.|+.+ ..+..|++
T Consensus 237 ~~~~~~~--~~~h~~~v~~~~~sp~~~~l~s~s~D-----~~v~iwd~ 277 (321)
T 3ow8_A 237 HANLAGT--LSGHASWVLNVAFCPDDTHFVSSSSD-----KSVKVWDV 277 (321)
T ss_dssp TCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEET
T ss_pred CcceeEE--EcCCCCceEEEEECCCCCEEEEEeCC-----CcEEEEeC
Confidence 7654332 1111111222223 56677777753 34455554
No 69
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=70.44 E-value=76 Score=30.27 Aligned_cols=62 Identities=10% Similarity=0.013 Sum_probs=36.9
Q ss_pred ceEEEEECC-CC---ceeeCCCCCCCCCceeeEEEE-eCCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCC
Q 020688 145 SHVDVYNFT-DN---KWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPL 215 (322)
Q Consensus 145 ~~v~~yd~~-t~---~W~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~ 215 (322)
.+++++|.. +. +...+..-. .......+. -++++|+.+..++ ...++.+|+.+.++.++.+.
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~---~~~~~~~~~spdg~l~~~~~~~~------~~~l~~~~~~~~~~~~l~~~ 283 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGP---EEAIAQAEWAPDGSLIVATDRTG------WWNLHRVDPATGAATQLCRR 283 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEET---TBCEEEEEECTTSCEEEEECTTS------SCEEEEECTTTCCEEESSCC
T ss_pred cEEEEEEECCCCcccccEEeCCCC---CceEcceEECCCCeEEEEECCCC------CeEEEEEECCCCceeecccc
Confidence 569999998 56 344333211 112222222 2667777665432 34799999989999888543
No 70
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=70.34 E-value=50 Score=28.17 Aligned_cols=96 Identities=7% Similarity=0.038 Sum_probs=53.3
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
+++||+.+..+ ..+++||+.+.+...+.... ...-.+++.. ++++|+.+...... ...+.+||+.+
T Consensus 55 ~g~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~---~~~~~~i~~~~dg~l~v~~~~~~~~----~~~i~~~d~~~ 121 (333)
T 2dg1_A 55 QGQLFLLDVFE------GNIFKINPETKEIKRPFVSH---KANPAAIKIHKDGRLFVCYLGDFKS----TGGIFAATENG 121 (333)
T ss_dssp TSCEEEEETTT------CEEEEECTTTCCEEEEEECS---SSSEEEEEECTTSCEEEEECTTSSS----CCEEEEECTTS
T ss_pred CCCEEEEECCC------CEEEEEeCCCCcEEEEeeCC---CCCcceEEECCCCcEEEEeCCCCCC----CceEEEEeCCC
Confidence 56788876532 35999999988877653222 1223344443 67888875432111 35789999988
Q ss_pred CcEEec-CCCCCCCCCCeEEE-ECCEEEEEcc
Q 020688 207 RKWDSI-PPLPSPRYSPATQL-WRGRLHVMGG 236 (322)
Q Consensus 207 ~~W~~~-~~~p~~r~~~~~~~-~~~~Lyi~GG 236 (322)
..-..+ ........-..++. -++++|+...
T Consensus 122 ~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 122 DNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp CSCEEEECSSSSCCCEEEEEECTTSCEEEEEC
T ss_pred CEEEEEEccCccCCcccceEECCCCCEEEEec
Confidence 776533 22111111112222 2577887643
No 71
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=70.30 E-value=63 Score=31.84 Aligned_cols=92 Identities=10% Similarity=0.060 Sum_probs=50.2
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++.||++||.. .-+.+||+.+++++....-..+....-.++... ++.|++.. . .-+.+||+++
T Consensus 482 ~g~lWi~~~t~------~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~---------~Gl~~~~~~~ 545 (758)
T 3ott_A 482 EGNVWVLLYNN------KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-H---------GGVMRINPKD 545 (758)
T ss_dssp TSCEEEEETTC------SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-T---------TEEEEECC--
T ss_pred CCCEEEEccCC------CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe-c---------CceEEEecCC
Confidence 45788765532 238899999999887642211101122233332 57888643 1 2378899998
Q ss_pred CcEEecC--CCCCCCCCCeEEEECCEEEEEcc
Q 020688 207 RKWDSIP--PLPSPRYSPATQLWRGRLHVMGG 236 (322)
Q Consensus 207 ~~W~~~~--~~p~~r~~~~~~~~~~~Lyi~GG 236 (322)
+++.... .+|.. .-.+++..+|.|++...
T Consensus 546 ~~~~~~~~~gl~~~-~i~~i~~~~g~lWi~t~ 576 (758)
T 3ott_A 546 ESQQSISFGSFSNN-EILSMTCVKNSIWVSTT 576 (758)
T ss_dssp CCCCBCCCCC---C-CEEEEEEETTEEEEEES
T ss_pred CceEEecccCCCcc-ceEEEEECCCCEEEECC
Confidence 8876653 33321 22334445788888753
No 72
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=70.05 E-value=44 Score=27.33 Aligned_cols=104 Identities=9% Similarity=-0.057 Sum_probs=52.3
Q ss_pred hhccCCCC-CCEEEcCCCCC-CcccceEEEECCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE
Q 020688 99 FADLPAPD-LEWEQMPSAPV-PRLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS 176 (322)
Q Consensus 99 ~~~~~~~~-~~W~~~~~~p~-~R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~ 176 (322)
++.+|..+ .+...+..... .........-+++.+++++.+... ...++.+|..+.+-..+.... . ...++.
T Consensus 64 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~---~--~~~~~~ 136 (297)
T 2ojh_A 64 LYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFG--KSAIYLLPSTGGTPRLMTKNL---P--SYWHGW 136 (297)
T ss_dssp EEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTS--SCEEEEEETTCCCCEECCSSS---S--EEEEEE
T ss_pred EEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCC--cceEEEEECCCCceEEeecCC---C--ccceEE
Confidence 44555555 55555543221 111112222255555666543222 346899998877655543322 2 222222
Q ss_pred --eCCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCC
Q 020688 177 --DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPL 215 (322)
Q Consensus 177 --~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~ 215 (322)
.+..|++.++.++ ...++.+|..+.....+...
T Consensus 137 spdg~~l~~~~~~~~------~~~l~~~~~~~~~~~~~~~~ 171 (297)
T 2ojh_A 137 SPDGKSFTYCGIRDQ------VFDIYSMDIDSGVETRLTHG 171 (297)
T ss_dssp CTTSSEEEEEEEETT------EEEEEEEETTTCCEEECCCS
T ss_pred CCCCCEEEEEECCCC------ceEEEEEECCCCcceEcccC
Confidence 2445655554332 23678888888777766543
No 73
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=69.88 E-value=28 Score=32.72 Aligned_cols=96 Identities=22% Similarity=0.337 Sum_probs=51.8
Q ss_pred ceEEEECCEEEEEeecCCCCCccceEEEEECCCCcee------------eCCCCCC----------------CCCc-eee
Q 020688 122 GAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWV------------DRFDMPK----------------DMAH-SHL 172 (322)
Q Consensus 122 ~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~------------~~~~~~~----------------p~~r-~~~ 172 (322)
-++....+++|+|-| +..++||+.+++-. .++.... ..+. ..-
T Consensus 191 DAA~~~~g~~YfFkG--------~~y~rfd~~~~~v~~gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~D 262 (460)
T 1qhu_A 191 TSALRWLGRYYCFQG--------NQFLRFNPVSGEVPPGYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLS 262 (460)
T ss_dssp SEEEEETTEEEEEET--------TEEEEECTTTCCCCTTCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCC
T ss_pred chheeeCCceEEEEC--------CEEEEEcCccCcccCCCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcC
Confidence 355556889999987 35788887654322 1111100 0011 122
Q ss_pred EEEE-eCCEEEEEecccCCCCCCCCceEEEEECCCCcEEe--c----CCCCCCCCCCeEEEECCEEEEEccC
Q 020688 173 GVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDS--I----PPLPSPRYSPATQLWRGRLHVMGGS 237 (322)
Q Consensus 173 ~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~--~----~~~p~~r~~~~~~~~~~~Lyi~GG~ 237 (322)
+++. .++++|.+-|. ..+++|...+.+.. + +.+|.. --++...++++|+|=|.
T Consensus 263 Ai~~~~~G~tYFFKg~----------~yWR~~~~~~~~~p~~Is~~WpglP~~--IDAAf~~~~~~yfFkG~ 322 (460)
T 1qhu_A 263 AMVSDNHGATYVFSGS----------HYWRLDTNRDGWHSWPIAHQWPQGPST--VDAAFSWEDKLYLIQDT 322 (460)
T ss_dssp EEEECTTCCEEEEETT----------EEEECTTGGGCCCCEEGGGTCTTSCSS--CSEEEEETTEEEEEETT
T ss_pred EEEecCCCeEEEEeCC----------EEEEEecCCCCcCccchhhhccCCCCC--CcEEEEECCeEEEEeCC
Confidence 3333 47899999763 35666554332211 1 233432 34556678999999664
No 74
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=69.61 E-value=77 Score=31.32 Aligned_cols=98 Identities=8% Similarity=0.064 Sum_probs=52.7
Q ss_pred hhccCCCCCCEEEcCCCCCCccc-ceEEEE-CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCC-CC-CceeeEE
Q 020688 99 FADLPAPDLEWEQMPSAPVPRLD-GAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPK-DM-AHSHLGV 174 (322)
Q Consensus 99 ~~~~~~~~~~W~~~~~~p~~R~~-~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~-p~-~r~~~~~ 174 (322)
+..+++.+.+++.......+... .+++.- ++.||+... .-+.+||+.+++|+....... +. ...-.++
T Consensus 429 l~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i 500 (781)
T 3v9f_A 429 ISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH--------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSI 500 (781)
T ss_dssp EEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET--------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEE
T ss_pred EEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC--------CceEEEeCCCCeEEecccCcccccccceeEEE
Confidence 34556656666665432111111 122222 467776431 348999999998876543221 00 1122233
Q ss_pred EEe-CCEEEEEecccCCCCCCCCceEEEEECCCCcEEecC
Q 020688 175 VSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP 213 (322)
Q Consensus 175 ~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~ 213 (322)
+.. ++.|++..- ..-+.+||+.+++++...
T Consensus 501 ~~d~~g~lWigt~---------~~Gl~~~~~~~~~~~~~~ 531 (781)
T 3v9f_A 501 AQDSEGRFWIGTF---------GGGVGIYTPDMQLVRKFN 531 (781)
T ss_dssp EECTTCCEEEEES---------SSCEEEECTTCCEEEEEC
T ss_pred EEcCCCCEEEEEc---------CCCEEEEeCCCCeEEEcc
Confidence 332 677887531 123788999999888875
No 75
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=69.35 E-value=36 Score=28.74 Aligned_cols=92 Identities=9% Similarity=0.020 Sum_probs=46.5
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
+++.++.|+.+ ..+.+||..+.+....-... ...-.+++.. ++..++.|+. ...+..||..+
T Consensus 152 ~~~~l~~~~~d------g~v~~~d~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~--------dg~i~~~d~~~ 214 (337)
T 1gxr_A 152 DSKVCFSCCSD------GNIAVWDLHNQTLVRQFQGH---TDGASCIDISNDGTKLWTGGL--------DNTVRSWDLRE 214 (337)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTEEEEEECCC---SSCEEEEEECTTSSEEEEEET--------TSEEEEEETTT
T ss_pred CCCEEEEEeCC------CcEEEEeCCCCceeeeeecc---cCceEEEEECCCCCEEEEEec--------CCcEEEEECCC
Confidence 45566666643 24888998877644322211 1122233332 5555666653 34688899887
Q ss_pred CcEEecCCCCCCCCCCeEEE-ECCEEEEEccCC
Q 020688 207 RKWDSIPPLPSPRYSPATQL-WRGRLHVMGGSK 238 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~-~~~~Lyi~GG~~ 238 (322)
.+-...-..+.+ -.+++. -+++++++|+.+
T Consensus 215 ~~~~~~~~~~~~--v~~~~~s~~~~~l~~~~~~ 245 (337)
T 1gxr_A 215 GRQLQQHDFTSQ--IFSLGYCPTGEWLAVGMES 245 (337)
T ss_dssp TEEEEEEECSSC--EEEEEECTTSSEEEEEETT
T ss_pred CceEeeecCCCc--eEEEEECCCCCEEEEEcCC
Confidence 653332222111 112222 256667777643
No 76
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=68.87 E-value=66 Score=28.93 Aligned_cols=92 Identities=12% Similarity=0.072 Sum_probs=48.1
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++.+++.|+.+ ..+.+||..+.+-...-... ...-.+++.. ++...+.|+. ...+..||..+
T Consensus 279 ~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~sg~~--------dg~i~vwd~~~ 341 (464)
T 3v7d_B 279 HGNIVVSGSYD------NTLIVWDVAQMKCLYILSGH---TDRIYSTIYDHERKRCISASM--------DTTIRIWDLEN 341 (464)
T ss_dssp ETTEEEEEETT------SCEEEEETTTTEEEEEECCC---SSCEEEEEEETTTTEEEEEET--------TSCEEEEETTT
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEecCC---CCCEEEEEEcCCCCEEEEEeC--------CCcEEEEECCC
Confidence 44555666643 24888998776543221111 1122233332 4555666654 24588899887
Q ss_pred CcEEecCCCCCCCCCCeEEEECCEEEEEccCC
Q 020688 207 RKWDSIPPLPSPRYSPATQLWRGRLHVMGGSK 238 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~ 238 (322)
.+-.. .+.........+.+.+..++.|+.+
T Consensus 342 ~~~~~--~~~~h~~~v~~~~~~~~~l~s~s~d 371 (464)
T 3v7d_B 342 GELMY--TLQGHTALVGLLRLSDKFLVSAAAD 371 (464)
T ss_dssp TEEEE--EECCCSSCEEEEEECSSEEEEEETT
T ss_pred CcEEE--EEeCCCCcEEEEEEcCCEEEEEeCC
Confidence 64322 2222233344455667777777753
No 77
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=68.75 E-value=42 Score=28.54 Aligned_cols=166 Identities=9% Similarity=0.049 Sum_probs=78.4
Q ss_pred hhhccCCCCCCEEEcCCCCC--C--cccceEEEECCEEEEEeecCCC-----CCccceEEEEECCCCceeeCC-CCCCCC
Q 020688 98 TFADLPAPDLEWEQMPSAPV--P--RLDGAAIQIKNLFYVFAGYGSL-----DYVHSHVDVYNFTDNKWVDRF-DMPKDM 167 (322)
Q Consensus 98 ~~~~~~~~~~~W~~~~~~p~--~--R~~~~~~~~~~~lyv~GG~~~~-----~~~~~~v~~yd~~t~~W~~~~-~~~~p~ 167 (322)
.+..+|..+.+++.+...+. + |....++.-++++|+-.-.... ......++++|+.. +...+. .+.
T Consensus 74 ~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~--- 149 (297)
T 3g4e_A 74 KFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVD--- 149 (297)
T ss_dssp EEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEES---
T ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccc---
Confidence 35566666677766543321 1 2222222225677764321110 11134689998763 333221 111
Q ss_pred CceeeEEEEe--CCEEEEEecccCCCCCCCCceEEEEEC--CCCcEEe---cCCCCC-CCCCCeEEE-ECCEEEEEccCC
Q 020688 168 AHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDS--ETRKWDS---IPPLPS-PRYSPATQL-WRGRLHVMGGSK 238 (322)
Q Consensus 168 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yD~--~t~~W~~---~~~~p~-~r~~~~~~~-~~~~Lyi~GG~~ 238 (322)
...+++.. ++.||+.... ...+++||. .+..... +..++. ...-.++++ -+|.||+.....
T Consensus 150 --~pngi~~spdg~~lyv~~~~--------~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~ 219 (297)
T 3g4e_A 150 --ISNGLDWSLDHKIFYYIDSL--------SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG 219 (297)
T ss_dssp --BEEEEEECTTSCEEEEEEGG--------GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT
T ss_pred --cccceEEcCCCCEEEEecCC--------CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC
Confidence 11234443 4568887542 346778865 5554321 111211 111123333 257888875321
Q ss_pred CCCCCCCcceeEeEEecccccccccccccCCCCCcceEEEEe---CCEEEEEcc
Q 020688 239 ENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRFAGF---PHVIYLSLV 289 (322)
Q Consensus 239 ~~~~~~~~~~~~i~~yd~~~~~~~W~~~~p~pr~~~~~~~v~---~~~iyi~GG 289 (322)
. .+.+||+. +.+.....++|.....+++.. .+.|||...
T Consensus 220 -----~-----~v~~~d~~--tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 220 -----G-----RVIRLDPV--TGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp -----T-----EEEEECTT--TCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred -----C-----EEEEEcCC--CceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 1 35677774 455444445554443344443 247999865
No 78
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=67.78 E-value=49 Score=27.92 Aligned_cols=64 Identities=8% Similarity=0.090 Sum_probs=35.6
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
+++.++.|+.++ .+.++|..+.+....-... ...-.+++.. ++++++.|+. ...+..||..+
T Consensus 34 ~~~~l~s~~~dg------~i~iw~~~~~~~~~~~~~h---~~~v~~~~~~~~~~~l~s~~~--------d~~i~vwd~~~ 96 (312)
T 4ery_A 34 NGEWLASSSADK------LIKIWGAYDGKFEKTISGH---KLGISDVAWSSDSNLLVSASD--------DKTLKIWDVSS 96 (312)
T ss_dssp TSSEEEEEETTS------CEEEEETTTCCEEEEECCC---SSCEEEEEECTTSSEEEEEET--------TSEEEEEETTT
T ss_pred CCCEEEEeeCCC------eEEEEeCCCcccchhhccC---CCceEEEEEcCCCCEEEEECC--------CCEEEEEECCC
Confidence 455666676432 3778888777665432211 1122223332 5566666664 34688889887
Q ss_pred Cc
Q 020688 207 RK 208 (322)
Q Consensus 207 ~~ 208 (322)
.+
T Consensus 97 ~~ 98 (312)
T 4ery_A 97 GK 98 (312)
T ss_dssp CC
T ss_pred Cc
Confidence 65
No 79
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=66.45 E-value=55 Score=27.09 Aligned_cols=90 Identities=9% Similarity=0.048 Sum_probs=48.5
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++.||+.... ...+.++|+ +.+...... +.. ...-.+++.. ++.+|+.... ...+.+||+ +
T Consensus 109 ~g~l~v~~~~------~~~i~~~d~-~g~~~~~~~-~~~-~~~~~~i~~~~~g~l~v~~~~--------~~~i~~~~~-~ 170 (299)
T 2z2n_A 109 NGDIWFTEMN------GNRIGRITD-DGKIREYEL-PNK-GSYPSFITLGSDNALWFTENQ--------NNAIGRITE-S 170 (299)
T ss_dssp TSCEEEEETT------TTEEEEECT-TCCEEEEEC-SST-TCCEEEEEECTTSCEEEEETT--------TTEEEEECT-T
T ss_pred CCCEEEEecC------CceEEEECC-CCCEEEecC-CCC-CCCCceEEEcCCCCEEEEeCC--------CCEEEEEcC-C
Confidence 5688886532 235889998 555554321 111 1223344444 6788886421 356899999 7
Q ss_pred CcEEecCCCCCCCCCC-eEEEE-CCEEEEEcc
Q 020688 207 RKWDSIPPLPSPRYSP-ATQLW-RGRLHVMGG 236 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~-~~~~~-~~~Lyi~GG 236 (322)
.+...+. ++.....+ +++.. +++||+...
T Consensus 171 g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~ 201 (299)
T 2z2n_A 171 GDITEFK-IPTPASGPVGITKGNDDALWFVEI 201 (299)
T ss_dssp CCEEEEE-CSSTTCCEEEEEECTTSSEEEEET
T ss_pred CcEEEee-CCCCCCcceeEEECCCCCEEEEcc
Confidence 7776541 11111122 33333 467888753
No 80
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=65.53 E-value=97 Score=29.62 Aligned_cols=80 Identities=11% Similarity=0.055 Sum_probs=46.4
Q ss_pred eEEEECCEEEEEeecCCCCCccceEEEEECCCCc--eeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEE
Q 020688 123 AAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTF 200 (322)
Q Consensus 123 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 200 (322)
+.++.+++||+... ...++.+|..+.+ |+.-..-.........+.++.++.||+..+...... ...+.
T Consensus 110 ~~~~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~---~g~v~ 179 (571)
T 2ad6_A 110 GLAYGAGQIVKKQA-------NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGV---RGAVN 179 (571)
T ss_dssp CCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTC---CCEEE
T ss_pred ccEEECCEEEEEeC-------CCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCC---CCEEE
Confidence 34567899988643 1358999998765 875321110000122233457899887643221111 35799
Q ss_pred EEECCCC--cEEec
Q 020688 201 VLDSETR--KWDSI 212 (322)
Q Consensus 201 ~yD~~t~--~W~~~ 212 (322)
+||++|. .|+.-
T Consensus 180 a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 180 AFDLKTGELKWRAF 193 (571)
T ss_dssp EEETTTCCEEEEEE
T ss_pred EEECCCCcEEEEEc
Confidence 9999876 48654
No 81
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=65.27 E-value=38 Score=33.60 Aligned_cols=90 Identities=10% Similarity=0.137 Sum_probs=50.8
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCC-CCCceeeEEEE-eCCEEEEEecccCCCCCCCCceE-EEEEC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPK-DMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRT-FVLDS 204 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~-p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~-~~yD~ 204 (322)
++.||+.. .+ .-+++||+.+++++....... + ...-.+++. -++.|++... .-+ .+||+
T Consensus 505 ~g~lWigt-~~------~Gl~~~~~~~~~~~~~~~~~~l~-~~~i~~i~~d~~g~lWi~T~----------~Glv~~~d~ 566 (781)
T 3v9f_A 505 EGRFWIGT-FG------GGVGIYTPDMQLVRKFNQYEGFC-SNTINQIYRSSKGQMWLATG----------EGLVCFPSA 566 (781)
T ss_dssp TCCEEEEE-SS------SCEEEECTTCCEEEEECTTTTCS-CSCEEEEEECTTSCEEEEET----------TEEEEESCT
T ss_pred CCCEEEEE-cC------CCEEEEeCCCCeEEEccCCCCCC-CCeeEEEEECCCCCEEEEEC----------CCceEEECC
Confidence 46677643 11 238889999998887643211 1 112223333 2677887542 225 78899
Q ss_pred CCCcEEecC---CCCCCCCCCeEEEE-CCEEEEEcc
Q 020688 205 ETRKWDSIP---PLPSPRYSPATQLW-RGRLHVMGG 236 (322)
Q Consensus 205 ~t~~W~~~~---~~p~~r~~~~~~~~-~~~Lyi~GG 236 (322)
+++++.... .+|.... .+++.. +|.||+.+.
T Consensus 567 ~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~ 601 (781)
T 3v9f_A 567 RNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN 601 (781)
T ss_dssp TTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEECS
T ss_pred CCCcEEEccccCCCCCceE-EEEEECCCCCEEEEcC
Confidence 888877763 3443322 334333 578888753
No 82
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=64.94 E-value=93 Score=29.91 Aligned_cols=80 Identities=10% Similarity=0.034 Sum_probs=41.0
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCC-ceeeCCCCCCCCCc-eeeEEEE-e--CCEEEEEecccCCCCCCCCceEEEE
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDN-KWVDRFDMPKDMAH-SHLGVVS-D--GRYIYIVSGQYGPQCRGPTSRTFVL 202 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~-~W~~~~~~~~p~~r-~~~~~~~-~--~~~iyv~GG~~~~~~~~~~~~~~~y 202 (322)
+++..+++..+.... ...++++|+.+. ....+.....+... ....++. - ++++++.+..++ ...++.+
T Consensus 268 dg~~l~~~~~~~~~~-~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g------~~~l~~~ 340 (706)
T 2z3z_A 268 DENILYVAEVNRAQN-ECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG------WNHLYLY 340 (706)
T ss_dssp TSSEEEEEEECTTSC-EEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTS------SCEEEEE
T ss_pred CCCEEEEEEeCCCCC-eeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCC------ccEEEEE
Confidence 454444444333222 346899999887 66554321110000 0011222 2 667655554332 3578899
Q ss_pred ECCCCcEEecCC
Q 020688 203 DSETRKWDSIPP 214 (322)
Q Consensus 203 D~~t~~W~~~~~ 214 (322)
|........+..
T Consensus 341 ~~~~~~~~~l~~ 352 (706)
T 2z3z_A 341 DTTGRLIRQVTK 352 (706)
T ss_dssp ETTSCEEEECCC
T ss_pred ECCCCEEEecCC
Confidence 977777777743
No 83
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=64.94 E-value=67 Score=27.62 Aligned_cols=92 Identities=11% Similarity=0.060 Sum_probs=46.2
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE-eCCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
+++.++.|+.+ ..+.+||..+.+-....... ...-.+++. -+++..+.|+.+ ..+..||..+
T Consensus 133 dg~~l~~g~~d------g~v~i~~~~~~~~~~~~~~~---~~~v~~~~~spdg~~lasg~~d--------g~i~iwd~~~ 195 (321)
T 3ow8_A 133 DSQYLATGTHV------GKVNIFGVESGKKEYSLDTR---GKFILSIAYSPDGKYLASGAID--------GIINIFDIAT 195 (321)
T ss_dssp TSSEEEEECTT------SEEEEEETTTCSEEEEEECS---SSCEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEEcCC------CcEEEEEcCCCceeEEecCC---CceEEEEEECCCCCEEEEEcCC--------CeEEEEECCC
Confidence 45566666542 34788888776533211111 112222333 256666677643 4578899887
Q ss_pred CcEEecCCCCCCCCCCeEEEE--CCEEEEEccCC
Q 020688 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSK 238 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~Lyi~GG~~ 238 (322)
.+-... +.........+.+ ++++++.|+.+
T Consensus 196 ~~~~~~--~~~h~~~v~~l~~spd~~~l~s~s~d 227 (321)
T 3ow8_A 196 GKLLHT--LEGHAMPIRSLTFSPDSQLLVTASDD 227 (321)
T ss_dssp TEEEEE--ECCCSSCCCEEEECTTSCEEEEECTT
T ss_pred CcEEEE--EcccCCceeEEEEcCCCCEEEEEcCC
Confidence 653221 1111111222222 56777787753
No 84
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=64.40 E-value=59 Score=27.38 Aligned_cols=92 Identities=12% Similarity=0.106 Sum_probs=45.9
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE-eCCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++++++.|+.+ ..+.+||..+.+-...-... ...-.+++. -++.+++.|+.+ ..+..||..+
T Consensus 76 ~~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~s~~~d--------~~i~iwd~~~ 138 (312)
T 4ery_A 76 DSNLLVSASDD------KTLKIWDVSSGKCLKTLKGH---SNYVFCCNFNPQSNLIVSGSFD--------ESVRIWDVKT 138 (312)
T ss_dssp TSSEEEEEETT------SEEEEEETTTCCEEEEEECC---SSCEEEEEECSSSSEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEECCC------CEEEEEECCCCcEEEEEcCC---CCCEEEEEEcCCCCEEEEEeCC--------CcEEEEECCC
Confidence 45666777643 35888998876533211111 111122222 245566666643 4578899887
Q ss_pred CcEEecCCCCCCCCCCeEEEE--CCEEEEEccCC
Q 020688 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSK 238 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~Lyi~GG~~ 238 (322)
.+-... ++........+.+ ++.+++.|+.+
T Consensus 139 ~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
T 4ery_A 139 GKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYD 170 (312)
T ss_dssp CCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 653222 1111112222233 56677777754
No 85
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=64.32 E-value=24 Score=29.70 Aligned_cols=102 Identities=14% Similarity=0.077 Sum_probs=49.8
Q ss_pred eCCEEEEEecccCCCCCCCCceEEEEECCC----CcEEe----c----CCCCCC--C-CCCeEEE--ECCEEEEEccCCC
Q 020688 177 DGRYIYIVSGQYGPQCRGPTSRTFVLDSET----RKWDS----I----PPLPSP--R-YSPATQL--WRGRLHVMGGSKE 239 (322)
Q Consensus 177 ~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t----~~W~~----~----~~~p~~--r-~~~~~~~--~~~~Lyi~GG~~~ 239 (322)
.++++|++-| +.+++||..+ +.-.. + +.+|.. . .--++.. .++++|+|-|..-
T Consensus 69 ~~g~~~fFkg----------~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG~~y 138 (225)
T 3oyo_A 69 EASEAYVFSG----------NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKGNKY 138 (225)
T ss_dssp STTEEEEEET----------TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEETTEE
T ss_pred CCCeEEEEcC----------CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeCCeE
Confidence 5899999975 3578886532 11111 1 233331 0 1123333 3689999987422
Q ss_pred CCCCCCcceeEeEEeccccccccccccc--CCCCCcceEEEE--eCCEEEEEccccC
Q 020688 240 NRHTPGLEHWSIAVKDGKALEKAWRTEI--PIPRGGPHRFAG--FPHVIYLSLVSSV 292 (322)
Q Consensus 240 ~~~~~~~~~~~i~~yd~~~~~~~W~~~~--p~pr~~~~~~~v--~~~~iyi~GG~~~ 292 (322)
-.+..... .++.+ |+.....|.... ..|..- .++.. .++++|+|-|...
T Consensus 139 w~~d~~~~--~~~~g-Pk~I~~~fpg~~~~~f~~~i-DAAf~~~~~g~~YfFkG~~y 191 (225)
T 3oyo_A 139 VRIAYDSK--QLVGN-IRNIGDGFPVLNGTEFESGI-DACFASHKEPEAYLFKGQNY 191 (225)
T ss_dssp EEEETTTT--EEEEE-EEEHHHHCGGGTTSTTTTCC-SEEEECSSTTEEEEEETTEE
T ss_pred EEEECCCC--eecCC-CcchhhcCCCcccccCCCCc-CEEEEeCCCCEEEEEECCEE
Confidence 11111111 12223 442233465431 113322 35555 3899999988543
No 86
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=63.91 E-value=46 Score=28.94 Aligned_cols=104 Identities=7% Similarity=0.129 Sum_probs=50.3
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
+++.++.|+.+. .+.++|..+..+..+..+..- ...-.+++.. ++.+++.|+.+ ..+..+|..+
T Consensus 72 ~g~~l~s~s~D~------~v~iw~~~~~~~~~~~~~~~h-~~~v~~v~~sp~~~~l~s~s~D--------~~v~iwd~~~ 136 (345)
T 3fm0_A 72 CGNYLASASFDA------TTCIWKKNQDDFECVTTLEGH-ENEVKSVAWAPSGNLLATCSRD--------KSVWVWEVDE 136 (345)
T ss_dssp TSSEEEEEETTS------CEEEEEECCC-EEEEEEECCC-SSCEEEEEECTTSSEEEEEETT--------SCEEEEEECT
T ss_pred CCCEEEEEECCC------cEEEEEccCCCeEEEEEccCC-CCCceEEEEeCCCCEEEEEECC--------CeEEEEECCC
Confidence 456667777543 366777777766544333320 1122223322 56666777653 3467777765
Q ss_pred C-cEEecCCCCCCCCCCeEEEE--CCEEEEEccCCCCCCCCCcceeEe
Q 020688 207 R-KWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 207 ~-~W~~~~~~p~~r~~~~~~~~--~~~Lyi~GG~~~~~~~~~~~~~~i 251 (322)
. .+..+..+.........+.+ ++.+++.|+.+ ..+..|++
T Consensus 137 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d-----~~i~~w~~ 179 (345)
T 3fm0_A 137 EDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD-----DTVKLYRE 179 (345)
T ss_dssp TSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETT-----SCEEEEEE
T ss_pred CCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCC-----CcEEEEEe
Confidence 4 33333222221222222333 46677777753 24455554
No 87
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=63.03 E-value=48 Score=32.55 Aligned_cols=94 Identities=15% Similarity=0.204 Sum_probs=54.9
Q ss_pred EEeCCEEEEEecccCCCCCCCCceEEEEECCCC--cEEecCCCCCC--------CCCCeEEEECCEEEEEccCCCCCCCC
Q 020688 175 VSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR--KWDSIPPLPSP--------RYSPATQLWRGRLHVMGGSKENRHTP 244 (322)
Q Consensus 175 ~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~--~W~~~~~~p~~--------r~~~~~~~~~~~Lyi~GG~~~~~~~~ 244 (322)
++.++.||+... ...+.++|.+|. .|+.-...+.. ....+.++.+++||+.... .
T Consensus 74 ~v~~g~vyv~~~---------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d------g 138 (677)
T 1kb0_A 74 VVVDGIMYVSAS---------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD------G 138 (677)
T ss_dssp EEETTEEEEECG---------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT------S
T ss_pred EEECCEEEEECC---------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC------C
Confidence 567999999864 246899998876 48876433210 1122445688898886431 1
Q ss_pred CcceeEeEEecccccccccccccC-C-CC--CcceEEEEeCCEEEEEc
Q 020688 245 GLEHWSIAVKDGKALEKAWRTEIP-I-PR--GGPHRFAGFPHVIYLSL 288 (322)
Q Consensus 245 ~~~~~~i~~yd~~~~~~~W~~~~p-~-pr--~~~~~~~v~~~~iyi~G 288 (322)
.+.++|....+..|+.... . ++ ......++.++.+|+..
T Consensus 139 -----~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~ 181 (677)
T 1kb0_A 139 -----RLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGN 181 (677)
T ss_dssp -----EEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECC
T ss_pred -----EEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEe
Confidence 3456666534556876543 1 11 11124456688887754
No 88
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=62.87 E-value=41 Score=29.59 Aligned_cols=94 Identities=14% Similarity=0.220 Sum_probs=47.6
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe--CCEEEEEecccCCCCCCCCceEEEEECC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
+++.++.|+.++ .+.++|..+.+-...-... ...-.+++.. ++.+++.||.+ ..+..||..
T Consensus 150 dg~~l~sgs~dg------~v~iwd~~~~~~~~~~~~h---~~~v~~v~~s~~~~~~~~s~~~d--------g~v~~wd~~ 212 (357)
T 4g56_B 150 DGTQAVSGGKDF------SVKVWDLSQKAVLKSYNAH---SSEVNCVAACPGKDTIFLSCGED--------GRILLWDTR 212 (357)
T ss_dssp SSSEEEEEETTS------CEEEEETTTTEEEEEECCC---SSCEEEEEECTTCSSCEEEEETT--------SCEEECCTT
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEEcCC---CCCEEEEEEccCCCceeeeeccC--------CceEEEECC
Confidence 556667777532 3888898887643321111 1122223332 33467777643 347788887
Q ss_pred CCcEEecCCCCCCCCCCeEEEE---CCEEEEEccCC
Q 020688 206 TRKWDSIPPLPSPRYSPATQLW---RGRLHVMGGSK 238 (322)
Q Consensus 206 t~~W~~~~~~p~~r~~~~~~~~---~~~Lyi~GG~~ 238 (322)
+.+-...............+.+ ++.+++.|+.+
T Consensus 213 ~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d 248 (357)
T 4g56_B 213 KPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDET 248 (357)
T ss_dssp SSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESS
T ss_pred CCceeeeeeeccccccccchhhhhcccceEEEeecc
Confidence 7653332222222222223333 35677777753
No 89
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=62.31 E-value=18 Score=31.18 Aligned_cols=107 Identities=11% Similarity=-0.016 Sum_probs=54.6
Q ss_pred hhccCCCCCCEEEcCCCCCCcccceEEEE-CCEEEEEeecCCCCCccceEEEEECCCCceeeC-CCCCCCCCceeeEEEE
Q 020688 99 FADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDR-FDMPKDMAHSHLGVVS 176 (322)
Q Consensus 99 ~~~~~~~~~~W~~~~~~p~~R~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~-~~~~~p~~r~~~~~~~ 176 (322)
++.+|..+.+...+...+ ...-.+++.- ++++|+....+... ...+++||+.+.+-+.+ ..... ...-..+++
T Consensus 68 i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~~~~--~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~i~~ 142 (333)
T 2dg1_A 68 IFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGDFKS--TGGIFAATENGDNLQDIIEDLST--AYCIDDMVF 142 (333)
T ss_dssp EEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTTSSS--CCEEEEECTTSCSCEEEECSSSS--CCCEEEEEE
T ss_pred EEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCCCCC--CceEEEEeCCCCEEEEEEccCcc--CCcccceEE
Confidence 455666666665542111 1111223322 56788875432111 24699999988776532 22111 222223333
Q ss_pred e-CCEEEEEecccCCCCCCCCceEEEEECCCCcEEec
Q 020688 177 D-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSI 212 (322)
Q Consensus 177 ~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~ 212 (322)
. ++.+|+........ .....++++|+.+.+...+
T Consensus 143 d~~g~l~v~~~~~~~~--~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 143 DSKGGFYFTDFRGYST--NPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp CTTSCEEEEECCCBTT--BCCEEEEEECTTSCCEEEE
T ss_pred CCCCCEEEEecccccc--CCCceEEEEeCCCCEEEEe
Confidence 3 67888864321111 1135789999988776654
No 90
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=61.81 E-value=81 Score=27.48 Aligned_cols=92 Identities=14% Similarity=0.138 Sum_probs=46.6
Q ss_pred CEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCCC
Q 020688 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~ 207 (322)
+.+++.|+.++ .+.+||..+.+....-... ...-.+++.. ++.+++.|+.+ ..+..||..+.
T Consensus 210 g~~l~sgs~Dg------~v~~wd~~~~~~~~~~~~h---~~~v~~v~~~p~~~~l~s~s~D--------~~v~lwd~~~~ 272 (354)
T 2pbi_B 210 GNTFVSGGCDK------KAMVWDMRSGQCVQAFETH---ESDVNSVRYYPSGDAFASGSDD--------ATCRLYDLRAD 272 (354)
T ss_dssp CCEEEEEETTS------CEEEEETTTCCEEEEECCC---SSCEEEEEECTTSSEEEEEETT--------SCEEEEETTTT
T ss_pred CCEEEEEeCCC------eEEEEECCCCcEEEEecCC---CCCeEEEEEeCCCCEEEEEeCC--------CeEEEEECCCC
Confidence 45667777542 4888998887654322111 1112223322 45666777643 35778888776
Q ss_pred cEEecCCCCCCCCCCeEEEE--CCEEEEEccC
Q 020688 208 KWDSIPPLPSPRYSPATQLW--RGRLHVMGGS 237 (322)
Q Consensus 208 ~W~~~~~~p~~r~~~~~~~~--~~~Lyi~GG~ 237 (322)
+-...-...........+.+ ++++++.|+.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~ 304 (354)
T 2pbi_B 273 REVAIYSKESIIFGASSVDFSLSGRLLFAGYN 304 (354)
T ss_dssp EEEEEECCTTCCSCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEcCCCcccceeEEEEeCCCCEEEEEEC
Confidence 43222111111222223332 5677777764
No 91
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=61.72 E-value=23 Score=30.91 Aligned_cols=99 Identities=14% Similarity=0.123 Sum_probs=45.7
Q ss_pred EEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE--eCCEEEEEecccCCCCCCCCceEEEEECCCCc
Q 020688 131 FYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK 208 (322)
Q Consensus 131 lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~ 208 (322)
...+|.+.....-.-.++.+|+.+.+.+.+..... ..-..++. .+..||+.+....... .-.++.+|..+.+
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~---~~p~~l~~spdg~~l~~~~~~~~~~~---~v~~~~~~~~~g~ 88 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEV---ANPSYLIPSADGKFVYSVNEFSKDQA---AVSAFAFDKEKGT 88 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEEC---SCCCSEEECTTSSEEEEEECCSSTTC---EEEEEEEETTTTE
T ss_pred EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccC---CCCceEEECCCCCEEEEEEccCCCCC---cEEEEEEeCCCCc
Confidence 33466664322211235667888888876544311 11111232 2456777654321111 2234556666677
Q ss_pred EEecCCCCCCCCCCeEEEECC-EEEEEc
Q 020688 209 WDSIPPLPSPRYSPATQLWRG-RLHVMG 235 (322)
Q Consensus 209 W~~~~~~p~~r~~~~~~~~~~-~Lyi~G 235 (322)
.+.+...+.....+....+++ .||+..
T Consensus 89 ~~~~~~~~~~~~~p~~~~~dg~~l~~~~ 116 (361)
T 3scy_A 89 LHLLNTQKTMGADPCYLTTNGKNIVTAN 116 (361)
T ss_dssp EEEEEEEECSSSCEEEEEECSSEEEEEE
T ss_pred EEEeeEeccCCCCcEEEEECCCEEEEEE
Confidence 777654432222222222254 466554
No 92
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=61.05 E-value=61 Score=26.91 Aligned_cols=95 Identities=7% Similarity=-0.022 Sum_probs=44.4
Q ss_pred ECCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE-eCCEEEEEecccCCCCCCCCceEEEEECC
Q 020688 127 IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 127 ~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
.++..++.|+.+ ..+.+||..+.+-........ ..-.+++. -++.+++.|+.+ ..+..+|..
T Consensus 27 ~~~~~l~s~~~d------g~v~vw~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~d--------g~i~~~~~~ 89 (313)
T 3odt_A 27 VDDSKVASVSRD------GTVRLWSKDDQWLGTVVYTGQ---GFLNSVCYDSEKELLLFGGKD--------TMINGVPLF 89 (313)
T ss_dssp EETTEEEEEETT------SEEEEEEESSSEEEEEEEECS---SCEEEEEEETTTTEEEEEETT--------SCEEEEETT
T ss_pred cCCCEEEEEEcC------CcEEEEECCCCEEEEEeecCC---ccEEEEEECCCCCEEEEecCC--------CeEEEEEee
Confidence 445556667643 348888887665433222111 12222222 255666666643 345566654
Q ss_pred CCc-EEecCCCCCCCCCCeEEEECCEEEEEccCC
Q 020688 206 TRK-WDSIPPLPSPRYSPATQLWRGRLHVMGGSK 238 (322)
Q Consensus 206 t~~-W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~ 238 (322)
... ...+..+.........+.+++.+++.|+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d 123 (313)
T 3odt_A 90 ATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWD 123 (313)
T ss_dssp CCTTSCC-CEECCCSSCEEEEEEETTEEEEEETT
T ss_pred ecCCCCcccchhhcccCEEEEEecCCEEEEEeCC
Confidence 321 112222222222333344566677777653
No 93
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=59.51 E-value=11 Score=33.19 Aligned_cols=123 Identities=13% Similarity=0.085 Sum_probs=51.9
Q ss_pred ccCCCCCCEEEcCCCCCCcccceEEEE--CCEEEEEeecCCCCCccceEEEEECCCCc-eeeCCCCCCCCCceeeEEEEe
Q 020688 101 DLPAPDLEWEQMPSAPVPRLDGAAIQI--KNLFYVFAGYGSLDYVHSHVDVYNFTDNK-WVDRFDMPKDMAHSHLGVVSD 177 (322)
Q Consensus 101 ~~~~~~~~W~~~~~~p~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~v~~yd~~t~~-W~~~~~~~~p~~r~~~~~~~~ 177 (322)
.++..+..|+.+..+.........+.+ ++++++.|+.+ ..+.+||..+.+ |.....+.. ....-.+++..
T Consensus 37 iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d------~~v~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~ 109 (377)
T 3dwl_C 37 LYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD------RNAYVYEKRPDGTWKQTLVLLR-LNRAATFVRWS 109 (377)
T ss_dssp EEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT------SSEEEC------CCCCEEECCC-CSSCEEEEECC
T ss_pred EEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC------CeEEEEEcCCCCceeeeeEecc-cCCceEEEEEC
Confidence 344445556665555433322233333 45666777643 247888887776 544333322 01222222222
Q ss_pred -CCEEEEEecccCCCCCCCCceEEEEECCCCc-EEecCCCCC-CCCCCeEEEE--CCEEEEEccCC
Q 020688 178 -GRYIYIVSGQYGPQCRGPTSRTFVLDSETRK-WDSIPPLPS-PRYSPATQLW--RGRLHVMGGSK 238 (322)
Q Consensus 178 -~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~-W~~~~~~p~-~r~~~~~~~~--~~~Lyi~GG~~ 238 (322)
++++++.|+.+ ..+..||..+.+ |..+..+.. .......+.+ ++++++.|+.+
T Consensus 110 ~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 167 (377)
T 3dwl_C 110 PNEDKFAVGSGA--------RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD 167 (377)
T ss_dssp TTSSCCEEEESS--------SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS
T ss_pred CCCCEEEEEecC--------CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC
Confidence 45666666543 346777776654 433322222 1112222222 45677777653
No 94
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=59.50 E-value=76 Score=27.74 Aligned_cols=98 Identities=10% Similarity=0.115 Sum_probs=47.8
Q ss_pred CEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCC---CCceeeEEEEe--CCEEEEEecccCCCCCCCCceEEEEE
Q 020688 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKD---MAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLD 203 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p---~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yD 203 (322)
+.+++.|+.+ ..+.+||..+.+-........+ ....-.+++.. +..+++.|+.++.. ..+..||
T Consensus 178 ~~~l~~~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~-----~~i~~~d 246 (416)
T 2pm9_A 178 AHVFASAGSS------NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDND-----PSILIWD 246 (416)
T ss_dssp TTEEEEESSS------SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSS-----CCCCEEE
T ss_pred CcEEEEEcCC------CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCC-----ceEEEEe
Confidence 4677777643 2488899988765432222210 01122233333 23567777654311 2577888
Q ss_pred CCCCcEEecCCCC-CCCCCCeEEEE---CCEEEEEccCC
Q 020688 204 SETRKWDSIPPLP-SPRYSPATQLW---RGRLHVMGGSK 238 (322)
Q Consensus 204 ~~t~~W~~~~~~p-~~r~~~~~~~~---~~~Lyi~GG~~ 238 (322)
..+..- .+..+. ........+.+ ++.+++.|+.+
T Consensus 247 ~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d 284 (416)
T 2pm9_A 247 LRNANT-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD 284 (416)
T ss_dssp TTSTTS-CSBCCCSCCSSCEEEEEECSSCSSCEEEEESS
T ss_pred CCCCCC-CcEEeecCccCceeEEEeCCCCCCeEEEEeCC
Confidence 876431 111222 11122223333 56777777753
No 95
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=59.16 E-value=77 Score=26.38 Aligned_cols=57 Identities=19% Similarity=0.338 Sum_probs=32.1
Q ss_pred ECCEEEEEeecCCCCCccceEEEEECCCCcee--eCC----CCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEE
Q 020688 127 IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWV--DRF----DMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTF 200 (322)
Q Consensus 127 ~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~--~~~----~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 200 (322)
.++++|+|=| +..|+++.....+. .+. .+|. .-. ++...++++|++-| +.++
T Consensus 27 ~~g~~yfFkg--------~~~Wr~~~~~~~~~p~~Is~~wpgLP~---~ID-AA~~~~~~~yfFkG----------~~yw 84 (219)
T 1hxn_A 27 NHGATYVFSG--------SHYWRLDTNRDGWHSWPIAHQWPQGPS---TVD-AAFSWEDKLYLIQD----------TKVY 84 (219)
T ss_dssp TTSCEEEEET--------TEEEESSSSSCTTCCEEGGGTCTTSCS---SCS-EEEEETTEEEEEET----------TEEE
T ss_pred CCCcEEEEeC--------CEEEEEcCCCCCCCceEhhhhccCCCC---Ccc-EEEEECCcEEEecC----------CEEE
Confidence 4788999977 23666654332211 121 2221 122 23335899999965 4578
Q ss_pred EEECC
Q 020688 201 VLDSE 205 (322)
Q Consensus 201 ~yD~~ 205 (322)
+|+..
T Consensus 85 ~~~~~ 89 (219)
T 1hxn_A 85 VFLTK 89 (219)
T ss_dssp EEECS
T ss_pred EEeCC
Confidence 88865
No 96
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=58.93 E-value=1.2e+02 Score=28.36 Aligned_cols=129 Identities=10% Similarity=0.013 Sum_probs=74.4
Q ss_pred CCCEEE--cCCCCCCcccceEEEECCEEEEEeecCCCCCccce-EEEE----E-CCCCceeeCCCCCCCCCceeeEEEEe
Q 020688 106 DLEWEQ--MPSAPVPRLDGAAIQIKNLFYVFAGYGSLDYVHSH-VDVY----N-FTDNKWVDRFDMPKDMAHSHLGVVSD 177 (322)
Q Consensus 106 ~~~W~~--~~~~p~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~-v~~y----d-~~t~~W~~~~~~~~p~~r~~~~~~~~ 177 (322)
.+.|++ ++.+|..-.-|+.+.+++.-|++|=.++.-....- +..| + |..-.=++++.-- ...-+-.++-.+
T Consensus 269 ~spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey-~~~AsEPCvkyY 347 (670)
T 3ju4_A 269 KSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEY-EPDASEPCIKYY 347 (670)
T ss_dssp TSCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGG-CTTEEEEEEEEE
T ss_pred cCCceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhh-ccccccchhhhh
Confidence 467754 45566556678899999888888854332221111 1112 1 1111112232221 113455666678
Q ss_pred CCEEEEEecccCCCCCCCCceEEEEECCCCcEEecC-CCCCCCCCCeEEEECCEEEEEccC
Q 020688 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP-PLPSPRYSPATQLWRGRLHVMGGS 237 (322)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~-~~p~~r~~~~~~~~~~~Lyi~GG~ 237 (322)
+++||+.--....... -+.+.+-+..-..|+.+. +-.......-.+..++.||+||-.
T Consensus 348 dgvLyLtTRgt~~~~~--GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsE 406 (670)
T 3ju4_A 348 DGVLYLITRGTRGDRL--GSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSE 406 (670)
T ss_dssp TTEEEEEEEESCTTSC--CCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEEC
T ss_pred CCEEEEEecCcCCCCC--cceeeeecccCCchhheeccccccccCCCcceeCCEEEEEecc
Confidence 9999998643333222 456777777778899883 222333445567889999999864
No 97
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=58.75 E-value=1e+02 Score=30.19 Aligned_cols=87 Identities=14% Similarity=0.077 Sum_probs=47.1
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECCCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~ 207 (322)
++.||+. .. .-+.+||+.+++++....-..| ...-.+++..++.|++.. .+-+.+||+++.
T Consensus 527 ~g~lWig-t~-------~Gl~~~~~~~~~~~~~~~~gl~-~~~i~~i~~~~g~lWi~t----------~~Gl~~~~~~~~ 587 (758)
T 3ott_A 527 DGLLWVG-FH-------GGVMRINPKDESQQSISFGSFS-NNEILSMTCVKNSIWVST----------TNGLWIIDRKTM 587 (758)
T ss_dssp TSCEEEE-ET-------TEEEEECC--CCCCBCCCCC----CCEEEEEEETTEEEEEE----------SSCEEEEETTTC
T ss_pred CCCEEEE-ec-------CceEEEecCCCceEEecccCCC-ccceEEEEECCCCEEEEC----------CCCeEEEcCCCc
Confidence 4678753 31 2388999999887765321111 223344555688998865 234788999998
Q ss_pred cEEecCCCCCCCCCCeEEEE--CCEEEEEc
Q 020688 208 KWDSIPPLPSPRYSPATQLW--RGRLHVMG 235 (322)
Q Consensus 208 ~W~~~~~~p~~r~~~~~~~~--~~~Lyi~G 235 (322)
+..... ++..... .++.. +|.||+-|
T Consensus 588 ~~~~~~-~~~~~~~-~~~~~~~~G~l~fG~ 615 (758)
T 3ott_A 588 DARQQN-MTNKRFT-SLLFDPKEDCVYLGG 615 (758)
T ss_dssp CEEEC---CCCCCS-EEEEETTTTEEEEEC
T ss_pred eeEEec-CCCCcee-eeEEECCCCcEEEec
Confidence 876542 3333332 23332 56666543
No 98
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=58.66 E-value=52 Score=28.19 Aligned_cols=104 Identities=11% Similarity=0.114 Sum_probs=52.0
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe---CCEEEEEecccCCCCCCCCceEEEEEC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD---GRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~yD~ 204 (322)
+++..+.|+.+ ..+.+||..+.+...+..+.. ....-.+++.. ++.+++.|+.+ ..+..+|.
T Consensus 24 ~g~~lasgs~D------~~v~lwd~~~~~~~~~~~l~g-H~~~V~~v~~~~~~~~~~l~s~s~D--------~~v~iWd~ 88 (316)
T 3bg1_A 24 YGTRLATCSSD------RSVKIFDVRNGGQILIADLRG-HEGPVWQVAWAHPMYGNILASCSYD--------RKVIIWRE 88 (316)
T ss_dssp GGCEEEEEETT------TEEEEEEEETTEEEEEEEEEC-CSSCEEEEEECCGGGSSCEEEEETT--------SCEEEECC
T ss_pred CCCEEEEEeCC------CeEEEEEecCCCcEEEEEEcC-CCccEEEEEeCCCCCCCEEEEEECC--------CEEEEEEC
Confidence 45666777643 347778877665433222221 01122223322 25666667643 45788898
Q ss_pred CCCcEEecCCCCCCCCCCeEEEE--C--CEEEEEccCCCCCCCCCcceeEe
Q 020688 205 ETRKWDSIPPLPSPRYSPATQLW--R--GRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 205 ~t~~W~~~~~~p~~r~~~~~~~~--~--~~Lyi~GG~~~~~~~~~~~~~~i 251 (322)
.+.+|..+..+.........+.+ + +.+++.|+.+ ..+..|++
T Consensus 89 ~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D-----~~i~lwd~ 134 (316)
T 3bg1_A 89 ENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD-----GAISLLTY 134 (316)
T ss_dssp SSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSS-----SCEEEEEE
T ss_pred CCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCC-----CCEEEEec
Confidence 88777554333222222223333 2 5567777653 33445554
No 99
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=58.46 E-value=80 Score=27.63 Aligned_cols=94 Identities=15% Similarity=0.246 Sum_probs=46.6
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE--eCCEEEEEecccCCCCCCCCceEEEEECC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
+++.++.|+.++ .+.++|..+.+-.. .+.. ....-.+++. .+..+++.|+.+ ..+..||..
T Consensus 138 dg~~l~sgs~d~------~i~iwd~~~~~~~~--~~~~-h~~~V~~~~~~~~~~~~l~s~s~D--------~~v~iwd~~ 200 (344)
T 4gqb_B 138 SGTQAVSGSKDI------CIKVWDLAQQVVLS--SYRA-HAAQVTCVAASPHKDSVFLSCSED--------NRILLWDTR 200 (344)
T ss_dssp TSSEEEEEETTS------CEEEEETTTTEEEE--EECC-CSSCEEEEEECSSCTTEEEEEETT--------SCEEEEETT
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEE--EEcC-cCCceEEEEecCCCCCceeeeccc--------ccccccccc
Confidence 556667777532 48888988775332 2221 0111122222 234577777653 357889988
Q ss_pred CCcEEecCCCCCCCCCCeEEEE---CCEEEEEccCC
Q 020688 206 TRKWDSIPPLPSPRYSPATQLW---RGRLHVMGGSK 238 (322)
Q Consensus 206 t~~W~~~~~~p~~r~~~~~~~~---~~~Lyi~GG~~ 238 (322)
+.+-...-...........+.+ ++++++.|+.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d 236 (344)
T 4gqb_B 201 CPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN 236 (344)
T ss_dssp SSSCEEECC----CCCEEEEEECSSCTTEEEEEETT
T ss_pred ccceeeeeecceeeccceeeeecCCCCcceEEeccC
Confidence 7654332111111111222222 45677888754
No 100
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=58.08 E-value=1.2e+02 Score=28.92 Aligned_cols=89 Identities=12% Similarity=0.062 Sum_probs=42.1
Q ss_pred cceEEEEECCC------CceeeCC-CCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECC-CC---cEEec
Q 020688 144 HSHVDVYNFTD------NKWVDRF-DMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSE-TR---KWDSI 212 (322)
Q Consensus 144 ~~~v~~yd~~t------~~W~~~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~-t~---~W~~~ 212 (322)
..+++++|..+ .+-+.+. .-.. .....+....+..|+.. ..+.....-...+++++|.. +. +...+
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~SpDG~~la~~-~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l 236 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDAHR--FVTGPRLSPDGRQAVWL-AWDHPRMPWEGTELKTARVTEDGRFADTRTL 236 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSCSS--EECCCEECTTSSEEEEE-EECTTCCTTTCEEEEEEEECTTSCEEEEEEE
T ss_pred eeEEEEEECCCCccccCCceeEEEecCCC--cccCceECCCCCEEEEE-ECCCCCCCCCCcEEEEEEECCCCcccccEEe
Confidence 35799999988 6666654 3221 11111121223445444 33322111013689999998 56 44444
Q ss_pred CCCCCCCCCCeEEEE--CCEEEEEccC
Q 020688 213 PPLPSPRYSPATQLW--RGRLHVMGGS 237 (322)
Q Consensus 213 ~~~p~~r~~~~~~~~--~~~Lyi~GG~ 237 (322)
..-. ........+ +|+||+.+..
T Consensus 237 ~~~~--~~~~~~~~~spdg~l~~~~~~ 261 (662)
T 3azo_A 237 LGGP--EEAIAQAEWAPDGSLIVATDR 261 (662)
T ss_dssp EEET--TBCEEEEEECTTSCEEEEECT
T ss_pred CCCC--CceEcceEECCCCeEEEEECC
Confidence 2211 111122222 6777776654
No 101
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=57.87 E-value=56 Score=28.22 Aligned_cols=65 Identities=6% Similarity=0.045 Sum_probs=37.4
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++.+++.|+.++ .+.+||..+.+-........ ...-.+++.. ++.+++.|+.+ ..+..||..+
T Consensus 138 ~~~~l~s~s~dg------~i~~wd~~~~~~~~~~~~~~--~~~i~~~~~~pdg~~lasg~~d--------g~i~iwd~~~ 201 (343)
T 3lrv_A 138 NTEYFIWADNRG------TIGFQSYEDDSQYIVHSAKS--DVEYSSGVLHKDSLLLALYSPD--------GILDVYNLSS 201 (343)
T ss_dssp -CCEEEEEETTC------CEEEEESSSSCEEEEECCCS--SCCCCEEEECTTSCEEEEECTT--------SCEEEEESSC
T ss_pred CCCEEEEEeCCC------cEEEEECCCCcEEEEEecCC--CCceEEEEECCCCCEEEEEcCC--------CEEEEEECCC
Confidence 455667677432 48889988776543322222 1122233333 56777777643 4688899887
Q ss_pred Cc
Q 020688 207 RK 208 (322)
Q Consensus 207 ~~ 208 (322)
.+
T Consensus 202 ~~ 203 (343)
T 3lrv_A 202 PD 203 (343)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 102
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=57.72 E-value=87 Score=26.51 Aligned_cols=185 Identities=9% Similarity=-0.062 Sum_probs=86.5
Q ss_pred hhccCCC-CCCEEEcCCCCCCcccceEEEE-CCEEEEEeecCCCCCccceEEEEECCCCc-eeeCC--CCCCCCCceeeE
Q 020688 99 FADLPAP-DLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNK-WVDRF--DMPKDMAHSHLG 173 (322)
Q Consensus 99 ~~~~~~~-~~~W~~~~~~p~~R~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~-W~~~~--~~~~p~~r~~~~ 173 (322)
+..+|+. +..|+.-.+. ....+++... ++++++.... . ...++.+|+..+. |+... ....+.......
T Consensus 58 V~~~d~~G~~~W~~~~~~--~~~~~~~~~~~dG~~lv~~~~-~----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v 130 (276)
T 3no2_A 58 AKMITRDGRELWNIAAPA--GCEMQTARILPDGNALVAWCG-H----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQI 130 (276)
T ss_dssp EEEECTTSCEEEEEECCT--TCEEEEEEECTTSCEEEEEES-T----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCC
T ss_pred EEEECCCCCEEEEEcCCC--CccccccEECCCCCEEEEecC-C----CCEEEEEeCCCCEEEEEeccCCCCcccccccCc
Confidence 4455552 2357654321 1122333333 5666555432 1 1347888885543 44311 111110111122
Q ss_pred EEEeCCEEEEEecccCCCCCCCCceEEEEECCCC-cEEecCCCCCCCCCCeEEE-ECCEEEEEccCCCCCCCCCcceeEe
Q 020688 174 VVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR-KWDSIPPLPSPRYSPATQL-WRGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 174 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~-~W~~~~~~p~~r~~~~~~~-~~~~Lyi~GG~~~~~~~~~~~~~~i 251 (322)
....++.+++.... ...+.+||++-+ .|+.-.+. ..+++.. .++.+++.+..++ .+
T Consensus 131 ~~~~~G~~lv~~~~--------~~~v~~~d~~G~~~w~~~~~~----~~~~~~~~~~g~~~v~~~~~~----------~v 188 (276)
T 3no2_A 131 NKNKKGNYLVPLFA--------TSEVREIAPNGQLLNSVKLSG----TPFSSAFLDNGDCLVACGDAH----------CF 188 (276)
T ss_dssp EECTTSCEEEEETT--------TTEEEEECTTSCEEEEEECSS----CCCEEEECTTSCEEEECBTTS----------EE
T ss_pred eECCCCCEEEEecC--------CCEEEEECCCCCEEEEEECCC----CccceeEcCCCCEEEEeCCCC----------eE
Confidence 23345666655421 356899998733 37654321 1223333 4678888765321 24
Q ss_pred EEecccccccccccccC-CC--CCc-ceEEEEe-CCEEEEEc--cccC---CCCceEEeeccccccceeEE
Q 020688 252 AVKDGKALEKAWRTEIP-IP--RGG-PHRFAGF-PHVIYLSL--VSSV---EDLNFYVIQVPWEYNFKFRI 312 (322)
Q Consensus 252 ~~yd~~~~~~~W~~~~p-~p--r~~-~~~~~v~-~~~iyi~G--G~~~---e~~~~~~~q~~~~~~~~~~~ 312 (322)
..+|+...+-.|+.... ++ |.. ..+++++ +|.+|+.. |... +..+...++++-+-+.+|..
T Consensus 189 ~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~ 259 (276)
T 3no2_A 189 VQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQL 259 (276)
T ss_dssp EEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEE
T ss_pred EEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEe
Confidence 56676533456765321 11 222 2344444 88888886 4332 11234455565555555554
No 103
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=57.55 E-value=54 Score=27.57 Aligned_cols=88 Identities=11% Similarity=0.050 Sum_probs=49.9
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++.||+.+.. ...+++||+.+. .+.... +. ..-.+++.. +++||+.... ...+.+||+.+
T Consensus 39 g~~l~~~~~~------~~~i~~~~~~~~-~~~~~~-~~---~~~~~l~~~~dg~l~v~~~~--------~~~i~~~d~~~ 99 (296)
T 3e5z_A 39 RSAVIFSDVR------QNRTWAWSDDGQ-LSPEMH-PS---HHQNGHCLNKQGHLIACSHG--------LRRLERQREPG 99 (296)
T ss_dssp GTEEEEEEGG------GTEEEEEETTSC-EEEEES-SC---SSEEEEEECTTCCEEEEETT--------TTEEEEECSTT
T ss_pred CCEEEEEeCC------CCEEEEEECCCC-eEEEEC-CC---CCcceeeECCCCcEEEEecC--------CCeEEEEcCCC
Confidence 3458888753 235899999987 554432 21 122344443 6788876521 25689999988
Q ss_pred CcEEecCCC----CCCCCCCeEEEECCEEEEE
Q 020688 207 RKWDSIPPL----PSPRYSPATQLWRGRLHVM 234 (322)
Q Consensus 207 ~~W~~~~~~----p~~r~~~~~~~~~~~Lyi~ 234 (322)
.+...+... +..+....++.-+|+||+.
T Consensus 100 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 100 GEWESIADSFEGKKLNSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp CCEEEEECEETTEECCCCCCEEECTTSCEEEE
T ss_pred CcEEEEeeccCCCCCCCCCCEEECCCCCEEEE
Confidence 887765321 1111112223335778775
No 104
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=57.39 E-value=85 Score=28.17 Aligned_cols=96 Identities=11% Similarity=0.005 Sum_probs=50.0
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE--eCCEEEEEecccCCCCCCCCceEEEEECC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
++.+.+.|+.++ .|.++|..+.+-.....+.. ....-.+++. .++.+++.|+.+ ..+.++|.+
T Consensus 131 ~~~~lasGs~dg------~i~lWd~~~~~~~~~~~~~g-H~~~V~~l~f~p~~~~~l~s~s~D--------~~v~iwd~~ 195 (435)
T 4e54_B 131 HPSTVAVGSKGG------DIMLWNFGIKDKPTFIKGIG-AGGSITGLKFNPLNTNQFYASSME--------GTTRLQDFK 195 (435)
T ss_dssp CTTCEEEEETTS------CEEEECSSCCSCCEEECCCS-SSCCCCEEEECSSCTTEEEEECSS--------SCEEEEETT
T ss_pred CCCEEEEEeCCC------EEEEEECCCCCceeEEEccC-CCCCEEEEEEeCCCCCEEEEEeCC--------CEEEEeecc
Confidence 456777887543 38888887765433222211 0122223333 245566666643 347788988
Q ss_pred CCcEEecCCCCCCC-CCCeEE-EECCEEEEEccCC
Q 020688 206 TRKWDSIPPLPSPR-YSPATQ-LWRGRLHVMGGSK 238 (322)
Q Consensus 206 t~~W~~~~~~p~~r-~~~~~~-~~~~~Lyi~GG~~ 238 (322)
++.-..+....... ...++. .-++.+++.|+.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d 230 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNV 230 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSS
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCC
Confidence 87655543221111 112222 3366777888754
No 105
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=57.27 E-value=32 Score=32.54 Aligned_cols=74 Identities=8% Similarity=-0.037 Sum_probs=41.5
Q ss_pred ECCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE-eCCEEEEEecccCCCCCCCCceEEEEECC
Q 020688 127 IKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 127 ~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
-+++..++++.+... ...++++|+.+.+++.+..... .. ...+. -+|+.++.+..+ + ...++.+|..
T Consensus 159 pDG~~la~~~~~~~~--~~~i~~~d~~~g~~~~l~~~~~--~~--~~~~~SpDG~~l~~~~~~--~----~~~i~~~d~~ 226 (582)
T 3o4h_A 159 IRGDLIAGLGFFGGG--RVSLFTSNLSSGGLRVFDSGEG--SF--SSASISPGMKVTAGLETA--R----EARLVTVDPR 226 (582)
T ss_dssp EETTEEEEEEEEETT--EEEEEEEETTTCCCEEECCSSC--EE--EEEEECTTSCEEEEEECS--S----CEEEEEECTT
T ss_pred CCCCEEEEEEEcCCC--CeEEEEEcCCCCCceEeecCCC--cc--ccceECCCCCEEEEccCC--C----eeEEEEEcCC
Confidence 355555555543222 1359999999998887654332 12 22222 244433333221 1 2479999999
Q ss_pred CCcEEec
Q 020688 206 TRKWDSI 212 (322)
Q Consensus 206 t~~W~~~ 212 (322)
+.+...+
T Consensus 227 ~~~~~~~ 233 (582)
T 3o4h_A 227 DGSVEDL 233 (582)
T ss_dssp TCCEEEC
T ss_pred CCcEEEc
Confidence 9887733
No 106
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=56.85 E-value=43 Score=32.81 Aligned_cols=104 Identities=13% Similarity=0.113 Sum_probs=57.4
Q ss_pred hhccCCCC--CCEEEcCCCCCCc--------ccceEEEECCEEEEEeecCCCCCccceEEEEECCCCc--eeeCCCCCCC
Q 020688 99 FADLPAPD--LEWEQMPSAPVPR--------LDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFDMPKD 166 (322)
Q Consensus 99 ~~~~~~~~--~~W~~~~~~p~~R--------~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~~~p 166 (322)
++.+|..+ ..|+.-...+... ...+.++.+++||+... ...++.+|..+.+ |+.-...+..
T Consensus 78 v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~~~~ 150 (668)
T 1kv9_A 78 VIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-------DGRLIALDAKTGKAIWSQQTTDPAK 150 (668)
T ss_dssp EEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------TSEEEEEETTTCCEEEEEECSCTTS
T ss_pred EEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-------CCEEEEEECCCCCEeeeeccCCCCC
Confidence 44555544 3687754332110 12234567889887542 1358999988776 8763321110
Q ss_pred CCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECCCCc--EEec
Q 020688 167 MAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK--WDSI 212 (322)
Q Consensus 167 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~--W~~~ 212 (322)
......+.++.++.||+..+...... ...+..||++|.+ |+.-
T Consensus 151 ~~~~~~~P~v~~~~v~vg~~~~~~~~---~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 151 PYSITGAPRVVKGKVIIGNGGAEYGV---RGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp SCBCCSCCEEETTEEEECCBCTTTCC---BCEEEEEETTTCCEEEEEE
T ss_pred cceecCCCEEECCEEEEeCCCCCcCC---CCEEEEEECCCCcEEEEec
Confidence 01222334567898887533221111 4679999998874 8763
No 107
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=56.79 E-value=47 Score=27.45 Aligned_cols=62 Identities=19% Similarity=0.322 Sum_probs=37.8
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCC------CCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEE
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFD------MPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFV 201 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~------~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~ 201 (322)
++++|+|-| +..|+||..+++-..--| .+. .+..--++...++++|.+-| +..++
T Consensus 127 ~gk~yfFkG--------~~ywr~d~~~~~~d~gyPr~i~~~~~G-ip~~iDaAf~~~g~~YfFkg----------~~y~r 187 (207)
T 1pex_A 127 TGKTLLFSG--------NQVWRYDDTNHIMDKDYPRLIEEDFPG-IGDKVDAVYEKNGYIYFFNG----------PIQFE 187 (207)
T ss_dssp TSEEEEEET--------TEEEEEETTTTEECSSCCCBHHHHSTT-SCSCCSEEEEETTEEEEEET----------TEEEE
T ss_pred CCEEEEEeC--------CEEEEEeCcCccccCCCCccHHHcCCC-CCCCccEEEEcCCcEEEEEC----------CEEEE
Confidence 479999987 468999987654321100 111 11222233346899999965 45788
Q ss_pred EECCCCc
Q 020688 202 LDSETRK 208 (322)
Q Consensus 202 yD~~t~~ 208 (322)
||..+++
T Consensus 188 f~~~~~~ 194 (207)
T 1pex_A 188 YSIWSNR 194 (207)
T ss_dssp EETTTTE
T ss_pred EeCCccE
Confidence 8887654
No 108
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=55.92 E-value=30 Score=30.18 Aligned_cols=71 Identities=13% Similarity=0.123 Sum_probs=37.5
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCC----------CCCCCceeeEEEEe--CCEEEEEecccCCCCCCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDM----------PKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGP 195 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~----------~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 195 (322)
++.+++.|+.++ .+.+||..+.+....... +......-.+++.. ++.+++.|+.
T Consensus 55 ~~~~l~~~~~dg------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-------- 120 (408)
T 4a11_B 55 EGRYMLSGGSDG------VIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSF-------- 120 (408)
T ss_dssp TCCEEEEEETTS------CEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEET--------
T ss_pred CCCEEEEEcCCC------eEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeC--------
Confidence 456777777532 388888877654322110 00011222233332 4456666654
Q ss_pred CceEEEEECCCCcEEec
Q 020688 196 TSRTFVLDSETRKWDSI 212 (322)
Q Consensus 196 ~~~~~~yD~~t~~W~~~ 212 (322)
...+..||..+.+-...
T Consensus 121 d~~i~iwd~~~~~~~~~ 137 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADV 137 (408)
T ss_dssp TSEEEEEETTTTEEEEE
T ss_pred CCeEEEeeCCCCcccee
Confidence 34688899887765444
No 109
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=55.33 E-value=51 Score=28.77 Aligned_cols=67 Identities=9% Similarity=0.142 Sum_probs=33.4
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCC------------ceeeEEEEeCCEEEEEecccCCCCCCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMA------------HSHLGVVSDGRYIYIVSGQYGPQCRGP 195 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~------------r~~~~~~~~~~~iyv~GG~~~~~~~~~ 195 (322)
+++.++.|+.+ ..+.+||..+.+-........... ....+++...+..+++|+.+
T Consensus 160 ~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 226 (425)
T 1r5m_A 160 DGTHIISMDVE------NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK------- 226 (425)
T ss_dssp TSSEEEEEETT------CCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGG-------
T ss_pred CCCEEEEEecC------CeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC-------
Confidence 45555666643 247888987776544222221000 00222333333345666542
Q ss_pred CceEEEEECCCCc
Q 020688 196 TSRTFVLDSETRK 208 (322)
Q Consensus 196 ~~~~~~yD~~t~~ 208 (322)
..+..||..+.+
T Consensus 227 -g~i~~~d~~~~~ 238 (425)
T 1r5m_A 227 -GAIFVYQITEKT 238 (425)
T ss_dssp -GCEEEEETTCSS
T ss_pred -CeEEEEEcCCCc
Confidence 458889987753
No 110
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=54.89 E-value=66 Score=28.78 Aligned_cols=92 Identities=8% Similarity=-0.006 Sum_probs=45.7
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE-eCCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++.+++.|+.++ .+.+||..+.+-...-... ...-.+++. -++++.+.||.++ .+..||..+
T Consensus 119 ~~~~l~s~s~Dg------~i~vwd~~~~~~~~~l~~h---~~~V~~v~~~~~~~~l~sgs~D~--------~i~iwd~~~ 181 (410)
T 1vyh_C 119 VFSVMVSASEDA------TIKVWDYETGDFERTLKGH---TDSVQDISFDHSGKLLASCSADM--------TIKLWDFQG 181 (410)
T ss_dssp SSSEEEEEESSS------CEEEEETTTCCCCEEECCC---SSCEEEEEECTTSSEEEEEETTS--------CCCEEETTS
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEEecc---CCcEEEEEEcCCCCEEEEEeCCC--------eEEEEeCCC
Confidence 356667777532 4888998876543321111 112222333 2566777777543 356678766
Q ss_pred CcEEecCCCCCCCCCCeEEEE--CCEEEEEccCC
Q 020688 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSK 238 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~Lyi~GG~~ 238 (322)
.+-.. .+.........+.+ ++..++.|+.+
T Consensus 182 ~~~~~--~~~~h~~~V~~v~~~p~~~~l~s~s~D 213 (410)
T 1vyh_C 182 FECIR--TMHGHDHNVSSVSIMPNGDHIVSASRD 213 (410)
T ss_dssp SCEEE--CCCCCSSCEEEEEECSSSSEEEEEETT
T ss_pred CceeE--EEcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence 54322 22222222222333 45666777653
No 111
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=54.70 E-value=38 Score=28.72 Aligned_cols=71 Identities=7% Similarity=0.029 Sum_probs=38.1
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe---CCEEEEEecccCCCCCCCCceEEEEEC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD---GRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~yD~ 204 (322)
+++..+.|+.++ .+.+||..+.+.+.+..+.. ....-.+++.. ++.+++.|+.+ ..+..+|.
T Consensus 20 ~g~~las~s~D~------~v~iw~~~~~~~~~~~~l~g-H~~~V~~v~~s~~~~g~~l~s~s~D--------~~v~iWd~ 84 (297)
T 2pm7_B 20 YGKRMATCSSDK------TIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGTILASCSYD--------GKVMIWKE 84 (297)
T ss_dssp TSSEEEEEETTS------CEEEEEBCSSCBCCCEEECC-CSSCEEEEEECCGGGCSEEEEEETT--------TEEEEEEB
T ss_pred CCCEEEEEeCCC------EEEEEecCCCCcEEEEEEcc-ccCCeEEEEecCCCcCCEEEEEcCC--------CEEEEEEc
Confidence 456667777542 37788876554333322221 01122223322 25666677643 45788888
Q ss_pred CCCcEEecC
Q 020688 205 ETRKWDSIP 213 (322)
Q Consensus 205 ~t~~W~~~~ 213 (322)
.+.+|..+.
T Consensus 85 ~~~~~~~~~ 93 (297)
T 2pm7_B 85 ENGRWSQIA 93 (297)
T ss_dssp SSSCBCCCE
T ss_pred CCCceEEEE
Confidence 887775543
No 112
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=54.61 E-value=1e+02 Score=26.27 Aligned_cols=61 Identities=16% Similarity=0.206 Sum_probs=31.3
Q ss_pred cceEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCC
Q 020688 144 HSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP 214 (322)
Q Consensus 144 ~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~ 214 (322)
...++.+| +.+++.+..- . . .......+..|+..+...... ......++.+| +.++..+..
T Consensus 199 ~~~l~~~d--~~~~~~l~~~-~--~--~~~~spdg~~l~~~~~~~~~~-~~~~~~l~~~d--~~~~~~l~~ 259 (347)
T 2gop_A 199 FWDIYIWE--DGKEEKMFEK-V--S--FYAVDSDGERILLYGKPEKKY-MSEHNKLYIYD--GKEVMGILD 259 (347)
T ss_dssp CEEEEEEE--TTEEEEEEEE-E--S--EEEEEECSSCEEEEECCSSSC-CCSSCEEEEEC--SSCEEESST
T ss_pred cccEEEeC--CCceEEeccC-c--c--eeeECCCCCEEEEEEccccCC-ccccceEEEEC--CCceEeccc
Confidence 34688888 6666665432 1 1 122222344454444322111 11146789999 667777643
No 113
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=54.14 E-value=81 Score=30.98 Aligned_cols=104 Identities=17% Similarity=0.136 Sum_probs=57.5
Q ss_pred hhccCCCC--CCEEEcCCCCCC--------cccceEEEECCEEEEEeecCCCCCccceEEEEECCCCc--eeeCCC-CCC
Q 020688 99 FADLPAPD--LEWEQMPSAPVP--------RLDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK--WVDRFD-MPK 165 (322)
Q Consensus 99 ~~~~~~~~--~~W~~~~~~p~~--------R~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~-~~~ 165 (322)
++.+|..+ ..|+.-...+.. ....+.++.+++||+... -..++.+|..|.+ |+.-.. -+.
T Consensus 82 v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-------dg~l~AlDa~TG~~~W~~~~~~~~~ 154 (689)
T 1yiq_A 82 VYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-------DGRLEAIDAKTGQRAWSVDTRADHK 154 (689)
T ss_dssp EEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCSCTT
T ss_pred EEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-------CCEEEEEECCCCCEeeeecCcCCCC
Confidence 44556544 468765433211 012234567889887542 2358999998766 876432 111
Q ss_pred CCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECCCCc--EEec
Q 020688 166 DMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK--WDSI 212 (322)
Q Consensus 166 p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~--W~~~ 212 (322)
.......+.++.++.+|+..+...... ...+..||.+|.+ |+.-
T Consensus 155 ~~~~~~~sP~v~~g~v~vg~~~~~~~~---~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 155 RSYTITGAPRVVNGKVVIGNGGAEFGV---RGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp SCCBCCSCCEEETTEEEECCBCTTTCC---BCEEEEEETTTCCEEEEEE
T ss_pred CCccccCCcEEECCEEEEEeCCCccCC---CCEEEEEECCCCcEEEEec
Confidence 001222334567899887433211111 4679999999875 8753
No 114
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=53.93 E-value=26 Score=32.09 Aligned_cols=72 Identities=14% Similarity=0.199 Sum_probs=43.9
Q ss_pred CCEEEEEeec---CCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE-eCC--EEEEEecccCCCCCCCCceEEE
Q 020688 128 KNLFYVFAGY---GSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGR--YIYIVSGQYGPQCRGPTSRTFV 201 (322)
Q Consensus 128 ~~~lyv~GG~---~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~-~~~--~iyv~GG~~~~~~~~~~~~~~~ 201 (322)
++++||.-+. ......-+.++++|+.+.+-...-+++ ..-.++++ -++ .||+.-+. .+++.+
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg----~~~~~lavs~D~~~~ly~tn~~--------~~~VsV 358 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG----HEIDSINVSQDEKPLLYALSTG--------DKTLYI 358 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE----EEECEEEECSSSSCEEEEEETT--------TTEEEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC----CCcceEEECCCCCeEEEEEcCC--------CCeEEE
Confidence 6799997432 222223467999999988765433333 22333444 343 57776432 468999
Q ss_pred EECCCCcEEe
Q 020688 202 LDSETRKWDS 211 (322)
Q Consensus 202 yD~~t~~W~~ 211 (322)
||..+.+-..
T Consensus 359 iD~~t~k~~~ 368 (386)
T 3sjl_D 359 HDAESGEELR 368 (386)
T ss_dssp EETTTCCEEE
T ss_pred EECCCCcEEE
Confidence 9999887443
No 115
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=53.59 E-value=87 Score=26.44 Aligned_cols=101 Identities=12% Similarity=0.124 Sum_probs=48.9
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECCCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~ 207 (322)
++.+.+.|+.+ ..+.++|..+.+-...-.... .........-++.+.+.|+. ...+..||..+.
T Consensus 24 ~~~~l~s~~~d------g~v~lWd~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~s~s~--------d~~i~vwd~~~~ 87 (304)
T 2ynn_A 24 TEPWVLTTLYS------GRVELWNYETQVEVRSIQVTE--TPVRAGKFIARKNWIIVGSD--------DFRIRVFNYNTG 87 (304)
T ss_dssp SSSEEEEEETT------SEEEEEETTTTEEEEEEECCS--SCEEEEEEEGGGTEEEEEET--------TSEEEEEETTTC
T ss_pred CCCEEEEEcCC------CcEEEEECCCCceeEEeeccC--CcEEEEEEeCCCCEEEEECC--------CCEEEEEECCCC
Confidence 45666677643 348888988765432111111 11111222235555666654 346788898876
Q ss_pred cEEecCCCCCCCCCCeEEEE--CCEEEEEccCCCCCCCCCcceeEe
Q 020688 208 KWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 208 ~W~~~~~~p~~r~~~~~~~~--~~~Lyi~GG~~~~~~~~~~~~~~i 251 (322)
+-... +.........+.+ ++.+++.|+.+ ..+..|++
T Consensus 88 ~~~~~--~~~h~~~v~~~~~~~~~~~l~sgs~D-----~~v~lWd~ 126 (304)
T 2ynn_A 88 EKVVD--FEAHPDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNW 126 (304)
T ss_dssp CEEEE--EECCSSCEEEEEECSSSSEEEEEETT-----SCEEEEEG
T ss_pred cEEEE--EeCCCCcEEEEEEcCCCCEEEEECCC-----CeEEEEEC
Confidence 53221 1111111222222 45666777753 34455654
No 116
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=53.11 E-value=1e+02 Score=26.01 Aligned_cols=130 Identities=5% Similarity=-0.084 Sum_probs=64.2
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCC-ceeeCCCCCCCCCceeeEEEE-eCCEEEEEecccCCCCCCCCceEEEEECC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDN-KWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~-~W~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
++++++.+ .+.+..||+..+ .|+.-.+ . ....+++.. .++++++..+.+ ...+..+|+.
T Consensus 47 dG~ilvs~--------~~~V~~~d~~G~~~W~~~~~--~--~~~~~~~~~~~dG~~lv~~~~~-------~~~v~~vd~~ 107 (276)
T 3no2_A 47 AGEILFSY--------SKGAKMITRDGRELWNIAAP--A--GCEMQTARILPDGNALVAWCGH-------PSTILEVNMK 107 (276)
T ss_dssp TSCEEEEC--------BSEEEEECTTSCEEEEEECC--T--TCEEEEEEECTTSCEEEEEEST-------TEEEEEECTT
T ss_pred CCCEEEeC--------CCCEEEECCCCCEEEEEcCC--C--CccccccEECCCCCEEEEecCC-------CCEEEEEeCC
Confidence 67787732 135899999332 2764332 1 112333333 366666654321 2357788875
Q ss_pred CC-cEEec-C-CCCCC--CCCCeEEEECCEEEEEccCCCCCCCCCcceeEeEEecccccccccccccCCCCCcceEEEEe
Q 020688 206 TR-KWDSI-P-PLPSP--RYSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRFAGF 280 (322)
Q Consensus 206 t~-~W~~~-~-~~p~~--r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~~~~~~W~~~~p~pr~~~~~~~v~ 280 (322)
.+ .|+.- . ..+.+ .........++.+++....+ . .+.+||++ .+..|+...+. .++++..+
T Consensus 108 Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~-----~-----~v~~~d~~-G~~~w~~~~~~---~~~~~~~~ 173 (276)
T 3no2_A 108 GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFAT-----S-----EVREIAPN-GQLLNSVKLSG---TPFSSAFL 173 (276)
T ss_dssp SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTT-----T-----EEEEECTT-SCEEEEEECSS---CCCEEEEC
T ss_pred CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCC-----C-----EEEEECCC-CCEEEEEECCC---CccceeEc
Confidence 44 24432 1 11111 11122334456666654321 1 35678876 56678765431 11334444
Q ss_pred -CCEEEEEccc
Q 020688 281 -PHVIYLSLVS 290 (322)
Q Consensus 281 -~~~iyi~GG~ 290 (322)
++.+++.+..
T Consensus 174 ~~g~~~v~~~~ 184 (276)
T 3no2_A 174 DNGDCLVACGD 184 (276)
T ss_dssp TTSCEEEECBT
T ss_pred CCCCEEEEeCC
Confidence 6777777654
No 117
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=52.82 E-value=1.1e+02 Score=27.33 Aligned_cols=83 Identities=11% Similarity=0.085 Sum_probs=46.8
Q ss_pred ceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCe
Q 020688 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPA 223 (322)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~ 223 (322)
++|+++|..+.+-.++..+... ...-.+++.. ++.+.+.|+.+ ..+..||..+.+-... +........
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~-~~~V~sv~fspdg~~lasgs~D--------g~v~iWd~~~~~~~~~--~~~h~~~v~ 193 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQP-GEYISSVAWIKEGNYLAVGTSS--------AEVQLWDVQQQKRLRN--MTSHSARVG 193 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCST-TCCEEEEEECTTSSEEEEEETT--------SCEEEEETTTTEEEEE--ECCCSSCEE
T ss_pred CEEEEEECCCCCEEEEEEecCC-CCcEEEEEECCCCCEEEEEECC--------CeEEEEEcCCCcEEEE--EeCCCCceE
Confidence 3589999999887665444331 1112223322 56667777653 4578899887653322 222222334
Q ss_pred EEEECCEEEEEccCC
Q 020688 224 TQLWRGRLHVMGGSK 238 (322)
Q Consensus 224 ~~~~~~~Lyi~GG~~ 238 (322)
....++.+++.|+.+
T Consensus 194 ~~s~~~~~l~sgs~d 208 (420)
T 4gga_A 194 SLSWNSYILSSGSRS 208 (420)
T ss_dssp EEEEETTEEEEEETT
T ss_pred EEeeCCCEEEEEeCC
Confidence 455667777777654
No 118
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=52.81 E-value=1.1e+02 Score=29.26 Aligned_cols=74 Identities=18% Similarity=0.355 Sum_probs=44.5
Q ss_pred EEeCCEEEEEecccCCCCCCCCceEEEEECCCC--cEEecCCCCCC---CC---CCeEEEECCEEEEEccCCCCCCCCCc
Q 020688 175 VSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR--KWDSIPPLPSP---RY---SPATQLWRGRLHVMGGSKENRHTPGL 246 (322)
Q Consensus 175 ~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~--~W~~~~~~p~~---r~---~~~~~~~~~~Lyi~GG~~~~~~~~~~ 246 (322)
++.+++||+.+.. ..+.++|.+|. .|+.-...+.. .+ ..+.++.+++||+.... .
T Consensus 65 ~v~~g~vyv~~~~---------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~d------g-- 127 (582)
T 1flg_A 65 IVSDGVIYVTASY---------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLD------A-- 127 (582)
T ss_dssp EEETTEEEEEETT---------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETT------T--
T ss_pred EEECCEEEEEcCC---------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCC------C--
Confidence 5689999998642 24899998876 49875433221 11 12345688998885321 1
Q ss_pred ceeEeEEecccccccccccccC
Q 020688 247 EHWSIAVKDGKALEKAWRTEIP 268 (322)
Q Consensus 247 ~~~~i~~yd~~~~~~~W~~~~p 268 (322)
.+.++|.+..+..|+....
T Consensus 128 ---~l~AlD~~TG~~~W~~~~~ 146 (582)
T 1flg_A 128 ---SVVALNKNTGKVVWKKKFA 146 (582)
T ss_dssp ---EEEEEESSSCCEEEEEECS
T ss_pred ---EEEEEECCCCCEEeeecCC
Confidence 3456666544556876543
No 119
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=52.23 E-value=1.1e+02 Score=25.92 Aligned_cols=92 Identities=11% Similarity=0.044 Sum_probs=47.1
Q ss_pred CEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCCC
Q 020688 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~ 207 (322)
+.+++.|+.+ ..+.+||..+........+.. ....-.+++.. ++..++.|+. ...+..||..+.
T Consensus 54 g~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~--------dg~v~iwd~~~~ 118 (368)
T 3mmy_A 54 GNFLIAGSWA------NDVRCWEVQDSGQTIPKAQQM-HTGPVLDVCWSDDGSKVFTASC--------DKTAKMWDLSSN 118 (368)
T ss_dssp SEEEEEEETT------SEEEEEEECTTSCEEEEEEEE-CSSCEEEEEECTTSSEEEEEET--------TSEEEEEETTTT
T ss_pred ceEEEEECCC------CcEEEEEcCCCCceeEEEecc-ccCCEEEEEECcCCCEEEEEcC--------CCcEEEEEcCCC
Confidence 3777777753 247888877633222111111 01122223332 4555556654 346888999888
Q ss_pred cEEecCCCCCCCCCCeEEEE----CCEEEEEccCC
Q 020688 208 KWDSIPPLPSPRYSPATQLW----RGRLHVMGGSK 238 (322)
Q Consensus 208 ~W~~~~~~p~~r~~~~~~~~----~~~Lyi~GG~~ 238 (322)
+-..+.... .....+.+ ++.+++.|+.+
T Consensus 119 ~~~~~~~~~---~~v~~~~~~~~~~~~~l~~~~~d 150 (368)
T 3mmy_A 119 QAIQIAQHD---APVKTIHWIKAPNYSCVMTGSWD 150 (368)
T ss_dssp EEEEEEECS---SCEEEEEEEECSSCEEEEEEETT
T ss_pred Cceeecccc---CceEEEEEEeCCCCCEEEEccCC
Confidence 765543221 12222232 56777787754
No 120
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=52.02 E-value=71 Score=27.30 Aligned_cols=97 Identities=9% Similarity=-0.011 Sum_probs=53.9
Q ss_pred CCCEEEcCCCCCCcccceEEEE-CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEE
Q 020688 106 DLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYI 183 (322)
Q Consensus 106 ~~~W~~~~~~p~~R~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv 183 (322)
....+.+..+|.+..-...+.- ++.||+.--. ...++++|+.... ......+ ..-+++++. +++|||
T Consensus 19 ~~~~~~~~~~p~~~~pegia~~~~g~lyv~d~~------~~~I~~~d~~g~~-~~~~~~~----~~p~gia~~~dG~l~v 87 (306)
T 2p4o_A 19 LAPAKIITSFPVNTFLENLASAPDGTIFVTNHE------VGEIVSITPDGNQ-QIHATVE----GKVSGLAFTSNGDLVA 87 (306)
T ss_dssp CCCEEEEEEECTTCCEEEEEECTTSCEEEEETT------TTEEEEECTTCCE-EEEEECS----SEEEEEEECTTSCEEE
T ss_pred CCCceEeEeCCCCCCcceEEECCCCCEEEEeCC------CCeEEEECCCCce-EEEEeCC----CCceeEEEcCCCcEEE
Confidence 3445555555554444444442 5678887421 2458999987653 3222222 233445544 677988
Q ss_pred EecccCCCCCCCCceEEEEECCCCcEEecCCCCCCC
Q 020688 184 VSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPR 219 (322)
Q Consensus 184 ~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r 219 (322)
...... ...+.++|+.+.+.+.+...+..+
T Consensus 88 ad~~~~------~~~v~~~d~~~g~~~~~~~~~~~~ 117 (306)
T 2p4o_A 88 TGWNAD------SIPVVSLVKSDGTVETLLTLPDAI 117 (306)
T ss_dssp EEECTT------SCEEEEEECTTSCEEEEEECTTCS
T ss_pred EeccCC------cceEEEEcCCCCeEEEEEeCCCcc
Confidence 753211 135888998888877665444333
No 121
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=51.93 E-value=93 Score=30.34 Aligned_cols=63 Identities=8% Similarity=0.139 Sum_probs=34.0
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
+++..++|+.+ ..+.+||..+.+....-... ...-.+++.. ++...+.|+. ...+..||..+
T Consensus 66 ~~~~l~~~~~d------g~i~vw~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~--------dg~i~vw~~~~ 128 (814)
T 3mkq_A 66 RKNWIIVGSDD------FRIRVFNYNTGEKVVDFEAH---PDYIRSIAVHPTKPYVLSGSD--------DLTVKLWNWEN 128 (814)
T ss_dssp GGTEEEEEETT------SEEEEEETTTCCEEEEEECC---SSCEEEEEECSSSSEEEEEET--------TSEEEEEEGGG
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEEecC---CCCEEEEEEeCCCCEEEEEcC--------CCEEEEEECCC
Confidence 45566777642 35889998887754322111 1122223332 4444555553 24678888876
Q ss_pred C
Q 020688 207 R 207 (322)
Q Consensus 207 ~ 207 (322)
+
T Consensus 129 ~ 129 (814)
T 3mkq_A 129 N 129 (814)
T ss_dssp T
T ss_pred C
Confidence 5
No 122
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=51.79 E-value=70 Score=28.65 Aligned_cols=70 Identities=14% Similarity=0.132 Sum_probs=38.9
Q ss_pred CCEEEEEeecCC---CCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe--CC-EEEEEecccCCCCCCCCceEEE
Q 020688 128 KNLFYVFAGYGS---LDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GR-YIYIVSGQYGPQCRGPTSRTFV 201 (322)
Q Consensus 128 ~~~lyv~GG~~~---~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~~ 201 (322)
++++||...... .....++++++|..+.+-.. .++. +....++++- +. .+|+..+. .+++.+
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~--~i~~--g~~p~~i~~s~Dg~~~l~v~~~~--------~~~V~V 345 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSS--QISL--GHDVDAISVAQDGGPDLYALSAG--------TEVLHI 345 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEE--EEEC--CCCcCeEEECCCCCeEEEEEcCC--------CCeEEE
Confidence 578999754211 11124679999998876532 2222 2222333332 34 46654321 467999
Q ss_pred EECCCCcE
Q 020688 202 LDSETRKW 209 (322)
Q Consensus 202 yD~~t~~W 209 (322)
+|..+.+=
T Consensus 346 iD~~t~~v 353 (373)
T 2mad_H 346 YDAGAGDQ 353 (373)
T ss_pred EECCCCCE
Confidence 99987653
No 123
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=51.75 E-value=1.1e+02 Score=26.08 Aligned_cols=96 Identities=14% Similarity=0.039 Sum_probs=46.2
Q ss_pred eeEEEEeCCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCeEEEECCEEEEEccCCC-CCCCCCccee
Q 020688 171 HLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLWRGRLHVMGGSKE-NRHTPGLEHW 249 (322)
Q Consensus 171 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~~-~~~~~~~~~~ 249 (322)
.|+++.-++.+|.+|-....+...+.. ......++. .-..|++++-++++|..|-... +-..+
T Consensus 151 ~~~~~l~~G~v~~wG~n~~gqlg~p~~-------~~~~v~~i~----~G~~hs~al~~G~v~~wG~n~~gqlg~p----- 214 (282)
T 3qhy_B 151 YTALAVKNGGVIAWGDNYFGQTTVPAE-------AQSGVDDVA----GGIFHSLALKDGKVIAWGDNRYKQTTVP----- 214 (282)
T ss_dssp SEEEEEETTEEEEEECCTTSTTSCCGG-------GGSSEEEEE----ECSSEEEEEETTEEEEEECCTTSTTCCC-----
T ss_pred CEEEEEECCEEEEecCCCCCCCCCcee-------cCCCeEEEE----ecCCEEEEEECCeEEEEECCCCCCCCCC-----
Confidence 455555588899888543322210000 012233332 1234555567899999985322 11111
Q ss_pred EeEEecccccccccccccCCCCCcceEEEEeCCEEEEEccccC
Q 020688 250 SIAVKDGKALEKAWRTEIPIPRGGPHRFAGFPHVIYLSLVSSV 292 (322)
Q Consensus 250 ~i~~yd~~~~~~~W~~~~p~pr~~~~~~~v~~~~iyi~GG~~~ 292 (322)
......+..+.-...|.+++.++++|..|-.+.
T Consensus 215 ----------~~~~~~v~~i~~G~~h~~al~~g~v~~wG~n~~ 247 (282)
T 3qhy_B 215 ----------TEALSGVSAIASGEWYSLALKNGKVIAWGSSRT 247 (282)
T ss_dssp ----------GGGGSSCCEEEECSSCEEEEETTEEEEESTTCC
T ss_pred ----------cccCCCceEEEcCCCEEEEEECCEEEEecCCCC
Confidence 111111211211222555555999999997653
No 124
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=51.38 E-value=1.2e+02 Score=26.24 Aligned_cols=92 Identities=9% Similarity=-0.052 Sum_probs=46.1
Q ss_pred CEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE-eCCEEEEEecccCCCCCCCCceEEEEECCCC
Q 020688 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~ 207 (322)
+.+++.|+.+ ..+.++|..++....+...... ...-.+++. -++.+++.|+. ...+..||....
T Consensus 131 ~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~--------d~~i~i~d~~~~ 195 (383)
T 3ei3_B 131 TNQLFVSSIR------GATTLRDFSGSVIQVFAKTDSW-DYWYCCVDVSVSRQMLATGDS--------TGRLLLLGLDGH 195 (383)
T ss_dssp EEEEEEEETT------TEEEEEETTSCEEEEEECCCCS-SCCEEEEEEETTTTEEEEEET--------TSEEEEEETTSC
T ss_pred CCEEEEEeCC------CEEEEEECCCCceEEEeccCCC-CCCeEEEEECCCCCEEEEECC--------CCCEEEEECCCC
Confidence 3666666643 3488899987766554433210 111222222 24556666654 346888888544
Q ss_pred cEEecCCCCCCCCCCeEEEE--CCE-EEEEccCC
Q 020688 208 KWDSIPPLPSPRYSPATQLW--RGR-LHVMGGSK 238 (322)
Q Consensus 208 ~W~~~~~~p~~r~~~~~~~~--~~~-Lyi~GG~~ 238 (322)
.-..+.. .......+.+ ++. +++.|+.+
T Consensus 196 ~~~~~~~---h~~~v~~~~~~~~~~~~l~s~~~d 226 (383)
T 3ei3_B 196 EIFKEKL---HKAKVTHAEFNPRCDWLMATSSVD 226 (383)
T ss_dssp EEEEEEC---SSSCEEEEEECSSCTTEEEEEETT
T ss_pred EEEEecc---CCCcEEEEEECCCCCCEEEEEeCC
Confidence 4333321 1112222223 344 77777653
No 125
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=51.33 E-value=1.1e+02 Score=25.83 Aligned_cols=68 Identities=7% Similarity=0.003 Sum_probs=36.6
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++++++.|+.+ ..+.+||..+.+-...-.-. ...-.+++.. +++.++.|+. ...+..||..+
T Consensus 43 ~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~h---~~~v~~~~~~~~~~~l~s~~~--------dg~i~iwd~~~ 105 (369)
T 3zwl_B 43 EGDLLFSCSKD------SSASVWYSLNGERLGTLDGH---TGTIWSIDVDCFTKYCVTGSA--------DYSIKLWDVSN 105 (369)
T ss_dssp TSCEEEEEESS------SCEEEEETTTCCEEEEECCC---SSCEEEEEECTTSSEEEEEET--------TTEEEEEETTT
T ss_pred CCCEEEEEeCC------CEEEEEeCCCchhhhhhhhc---CCcEEEEEEcCCCCEEEEEeC--------CCeEEEEECCC
Confidence 45666667643 24888898776543321111 1122233332 4555666654 24688899887
Q ss_pred CcEEec
Q 020688 207 RKWDSI 212 (322)
Q Consensus 207 ~~W~~~ 212 (322)
.+-...
T Consensus 106 ~~~~~~ 111 (369)
T 3zwl_B 106 GQCVAT 111 (369)
T ss_dssp CCEEEE
T ss_pred CcEEEE
Confidence 764433
No 126
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=50.51 E-value=1.1e+02 Score=25.87 Aligned_cols=67 Identities=16% Similarity=0.289 Sum_probs=35.0
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCC-CceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTD-NKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t-~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
+++.++.|+.+ ..+.+||..+ .+-....... ...-.+++.. ++.+++.|+. ...+..||..
T Consensus 186 ~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~--------d~~i~v~d~~ 248 (369)
T 3zwl_B 186 KGKYIIAGHKD------GKISKYDVSNNYEYVDSIDLH---EKSISDMQFSPDLTYFITSSR--------DTNSFLVDVS 248 (369)
T ss_dssp GGCEEEEEETT------SEEEEEETTTTTEEEEEEECC---SSCEEEEEECTTSSEEEEEET--------TSEEEEEETT
T ss_pred CCCEEEEEcCC------CEEEEEECCCCcEeEEEEecC---CCceeEEEECCCCCEEEEecC--------CceEEEEECC
Confidence 44556666643 3588999887 3322211111 1122233332 5555566653 3468889988
Q ss_pred CCcEEe
Q 020688 206 TRKWDS 211 (322)
Q Consensus 206 t~~W~~ 211 (322)
+.+-..
T Consensus 249 ~~~~~~ 254 (369)
T 3zwl_B 249 TLQVLK 254 (369)
T ss_dssp TCCEEE
T ss_pred CCceee
Confidence 765443
No 127
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=50.15 E-value=99 Score=30.59 Aligned_cols=82 Identities=20% Similarity=0.266 Sum_probs=49.3
Q ss_pred CCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCC-CCceEEEEECCCCcEEecCCCCCC----CCCCeEEE
Q 020688 153 TDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRG-PTSRTFVLDSETRKWDSIPPLPSP----RYSPATQL 226 (322)
Q Consensus 153 ~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~-~~~~~~~yD~~t~~W~~~~~~p~~----r~~~~~~~ 226 (322)
.-.+|+.+..++. ....+.+++. ++.+|+..+........ ....+++++-...+|+.+.+.|.. +++.+.+.
T Consensus 230 gG~tW~~~~~~p~--~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~~~~i~ 307 (737)
T 2cn3_A 230 GGVTWKAVPGQPK--GLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCFAGLA 307 (737)
T ss_dssp TTSCCEECTTCCC--SSEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSSCTTSTTCCSEEEEEE
T ss_pred CCCceEECCCCCC--cccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCCCCCCcccccccccEE
Confidence 3567999886654 3333444433 78999876432111000 145789999999999999776542 33333333
Q ss_pred E----CCEEEEEcc
Q 020688 227 W----RGRLHVMGG 236 (322)
Q Consensus 227 ~----~~~Lyi~GG 236 (322)
+ .+.||+.+.
T Consensus 308 v~p~~~~~ly~~~~ 321 (737)
T 2cn3_A 308 VDRQNPDIIMVTSM 321 (737)
T ss_dssp ECTTCTTCEEEEEE
T ss_pred EcCCCCCEEEEEec
Confidence 3 367888765
No 128
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=49.93 E-value=1.1e+02 Score=25.20 Aligned_cols=89 Identities=11% Similarity=0.162 Sum_probs=48.6
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++.+|+.... ...+++||+ +.+..... .+.. ...-.+++.. ++.||+.... ...+.+||+ +
T Consensus 151 ~g~l~v~~~~------~~~i~~~~~-~g~~~~~~-~~~~-~~~~~~i~~~~~g~l~v~~~~--------~~~i~~~~~-~ 212 (299)
T 2z2n_A 151 DNALWFTENQ------NNAIGRITE-SGDITEFK-IPTP-ASGPVGITKGNDDALWFVEII--------GNKIGRITT-S 212 (299)
T ss_dssp TSCEEEEETT------TTEEEEECT-TCCEEEEE-CSST-TCCEEEEEECTTSSEEEEETT--------TTEEEEECT-T
T ss_pred CCCEEEEeCC------CCEEEEEcC-CCcEEEee-CCCC-CCcceeEEECCCCCEEEEccC--------CceEEEECC-C
Confidence 5678875421 245899999 66666531 1211 1122344444 5778887531 356889999 7
Q ss_pred CcEEecCCCCCCCCCC-eEEEE-CCEEEEEc
Q 020688 207 RKWDSIPPLPSPRYSP-ATQLW-RGRLHVMG 235 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~-~~~~~-~~~Lyi~G 235 (322)
.+..... ++...... +++.. +++||+..
T Consensus 213 g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 213 GEITEFK-IPTPNARPHAITAGAGIDLWFTE 242 (299)
T ss_dssp CCEEEEE-CSSTTCCEEEEEECSTTCEEEEE
T ss_pred CcEEEEE-CCCCCCCceeEEECCCCCEEEec
Confidence 7766542 22112222 23332 56888875
No 129
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=49.86 E-value=29 Score=29.59 Aligned_cols=98 Identities=7% Similarity=-0.083 Sum_probs=47.4
Q ss_pred hhccCCCCCCEEEcCCCCCCcccceEEEE-C-CEEEEEeecCCCCCccceEEEEECCCCce-ee-CCCCCCCCCceeeEE
Q 020688 99 FADLPAPDLEWEQMPSAPVPRLDGAAIQI-K-NLFYVFAGYGSLDYVHSHVDVYNFTDNKW-VD-RFDMPKDMAHSHLGV 174 (322)
Q Consensus 99 ~~~~~~~~~~W~~~~~~p~~R~~~~~~~~-~-~~lyv~GG~~~~~~~~~~v~~yd~~t~~W-~~-~~~~~~p~~r~~~~~ 174 (322)
+..+|..+.+.......+. ....++.- + +.+|+.+..+ ..++++|+.+.+- .. +..... ++...+.
T Consensus 22 v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~ 91 (331)
T 3u4y_A 22 ISFFSTDTLEILNQITLGY--DFVDTAITSDCSNVVVTSDFC------QTLVQIETQLEPPKVVAIQEGQS--SMADVDI 91 (331)
T ss_dssp EEEEETTTCCEEEEEECCC--CEEEEEECSSSCEEEEEESTT------CEEEEEECSSSSCEEEEEEECSS--CCCCEEE
T ss_pred EEEEeCcccceeeeEEccC--CcceEEEcCCCCEEEEEeCCC------CeEEEEECCCCceeEEecccCCC--CccceEE
Confidence 3445555565544322221 11122222 3 4577766421 3699999988774 22 222221 2221222
Q ss_pred EEeCCEEEEEecccCCCCCCCCceEEEEECCCCcEEec
Q 020688 175 VSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSI 212 (322)
Q Consensus 175 ~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~ 212 (322)
...+..|| .+...+ . ...+.+||+.+.+-...
T Consensus 92 s~dg~~l~-~~~~~~-~----~~~i~v~d~~~~~~~~~ 123 (331)
T 3u4y_A 92 TPDDQFAV-TVTGLN-H----PFNMQSYSFLKNKFIST 123 (331)
T ss_dssp CTTSSEEE-ECCCSS-S----SCEEEEEETTTTEEEEE
T ss_pred CCCCCEEE-EecCCC-C----cccEEEEECCCCCeEEE
Confidence 22355677 332111 1 23799999988765443
No 130
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=49.85 E-value=42 Score=28.57 Aligned_cols=66 Identities=8% Similarity=-0.092 Sum_probs=40.8
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++.||+..-. ...+++||+.+.+-.... .+. + -.+++.. ++++|+.. ...+.+||+++
T Consensus 24 ~~~l~~~d~~------~~~i~~~d~~~~~~~~~~-~~~---~-~~~i~~~~dG~l~v~~----------~~~l~~~d~~~ 82 (297)
T 3g4e_A 24 SNSLLFVDIP------AKKVCRWDSFTKQVQRVT-MDA---P-VSSVALRQSGGYVATI----------GTKFCALNWKE 82 (297)
T ss_dssp TTEEEEEETT------TTEEEEEETTTCCEEEEE-CSS---C-EEEEEEBTTSSEEEEE----------TTEEEEEETTT
T ss_pred CCEEEEEECC------CCEEEEEECCCCcEEEEe-CCC---c-eEEEEECCCCCEEEEE----------CCeEEEEECCC
Confidence 4688887642 245899999887654432 221 1 1233333 56676653 24688999999
Q ss_pred CcEEecCC
Q 020688 207 RKWDSIPP 214 (322)
Q Consensus 207 ~~W~~~~~ 214 (322)
.+++.+..
T Consensus 83 g~~~~~~~ 90 (297)
T 3g4e_A 83 QSAVVLAT 90 (297)
T ss_dssp TEEEEEEE
T ss_pred CcEEEEEe
Confidence 88877643
No 131
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=49.64 E-value=45 Score=29.60 Aligned_cols=106 Identities=12% Similarity=0.152 Sum_probs=51.9
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECCCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~ 207 (322)
+..+++.||-.. -..+.+||..+.+-...-.... +.........+..|++.+|.. ...+..||..+.
T Consensus 271 ~~~ll~~~~gs~----d~~i~i~d~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~g~~-------dg~i~v~~~~~~ 337 (401)
T 4aez_A 271 QSNLLATGGGTM----DKQIHFWNAATGARVNTVDAGS--QVTSLIWSPHSKEIMSTHGFP-------DNNLSIWSYSSS 337 (401)
T ss_dssp STTEEEEECCTT----TCEEEEEETTTCCEEEEEECSS--CEEEEEECSSSSEEEEEECTT-------TCEEEEEEEETT
T ss_pred CCCEEEEecCCC----CCEEEEEECCCCCEEEEEeCCC--cEEEEEECCCCCeEEEEeecC-------CCcEEEEecCCc
Confidence 345666664111 1358889988766433222221 222111111244555554432 346888888877
Q ss_pred cEEecCCCCCCCCCCeEEEE--CCEEEEEccCCCCCCCCCcceeEe
Q 020688 208 KWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 208 ~W~~~~~~p~~r~~~~~~~~--~~~Lyi~GG~~~~~~~~~~~~~~i 251 (322)
+......++........+.+ ++++++.||.+ ..+..|++
T Consensus 338 ~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~d-----g~i~iw~~ 378 (401)
T 4aez_A 338 GLTKQVDIPAHDTRVLYSALSPDGRILSTAASD-----ENLKFWRV 378 (401)
T ss_dssp EEEEEEEEECCSSCCCEEEECTTSSEEEEECTT-----SEEEEEEC
T ss_pred cceeEEEecCCCCCEEEEEECCCCCEEEEEeCC-----CcEEEEEC
Confidence 66665333222222222332 56677777753 23445554
No 132
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=49.63 E-value=1.2e+02 Score=25.91 Aligned_cols=94 Identities=6% Similarity=0.040 Sum_probs=46.6
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++.+++.|+.++ .+.+||..+.+-... +.. ....-.+++.. ++.+++.|+.+ ..+..||..+
T Consensus 195 ~~~~l~sg~~d~------~v~~wd~~~~~~~~~--~~~-h~~~v~~v~~~p~~~~l~s~s~d--------~~v~iwd~~~ 257 (340)
T 1got_B 195 DTRLFVSGACDA------SAKLWDVREGMCRQT--FTG-HESDINAICFFPNGNAFATGSDD--------ATCRLFDLRA 257 (340)
T ss_dssp TSSEEEEEETTS------CEEEEETTTCSEEEE--ECC-CSSCEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEEeCCC------cEEEEECCCCeeEEE--EcC-CcCCEEEEEEcCCCCEEEEEcCC--------CcEEEEECCC
Confidence 456777777532 478889877653321 111 01112223332 56667777643 4578888877
Q ss_pred CcEEecCCCCCCCCCCeEEEE--CCEEEEEccCC
Q 020688 207 RKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSK 238 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~--~~~Lyi~GG~~ 238 (322)
.+-...-..+........+.+ ++++++.|+.+
T Consensus 258 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d 291 (340)
T 1got_B 258 DQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD 291 (340)
T ss_dssp TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred CcEEEEEccCCcccceEEEEECCCCCEEEEECCC
Confidence 643222111111112222222 56777777753
No 133
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=49.57 E-value=1.1e+02 Score=25.44 Aligned_cols=56 Identities=13% Similarity=0.075 Sum_probs=32.2
Q ss_pred ceEEEEECCCCceeeCCCCCCCCCc-eeeEEEEe--CCEEEEEecccCCCCCCCCceEEEEECCCCcEE
Q 020688 145 SHVDVYNFTDNKWVDRFDMPKDMAH-SHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWD 210 (322)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~p~~r-~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~ 210 (322)
..+.++|+.+.+-...-.++. .. .-..++.. ++.+|+.++. ...+.++|+.+.+-.
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~v~~~~--------~~~v~~~d~~~~~~~ 69 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIAD--AGPTPMVPMVAPGGRIAYATVNK--------SESLVKIDLVTGETL 69 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTT--CTTCCCCEEECTTSSEEEEEETT--------TTEEEEEETTTCCEE
T ss_pred CeEEEEECCCCcEEEEEEcCC--CCCCccceEEcCCCCEEEEEeCC--------CCeEEEEECCCCCeE
Confidence 458999998876544322222 10 11223332 4478887642 356899999887644
No 134
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=49.43 E-value=1.3e+02 Score=26.05 Aligned_cols=112 Identities=8% Similarity=0.026 Sum_probs=56.7
Q ss_pred CCCEEEcCCC-CCCc-ccceEEEECCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE-eCCEEE
Q 020688 106 DLEWEQMPSA-PVPR-LDGAAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIY 182 (322)
Q Consensus 106 ~~~W~~~~~~-p~~R-~~~~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~-~~~~iy 182 (322)
...|+.+... +.+. ....+...++.+|+.|.. ..+++-+=.-++|+.+..... .+.....++. -++.+|
T Consensus 65 G~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~-------g~i~~S~DgG~tW~~~~~~~~-~~~~~~~i~~~~~~~~~ 136 (327)
T 2xbg_A 65 GQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEP-------PIMLHTTDGGQSWSQIPLDPK-LPGSPRLIKALGNGSAE 136 (327)
T ss_dssp TSSCEECCCCCSCCCCEEEEEEEETTEEEEEEET-------TEEEEESSTTSSCEECCCCTT-CSSCEEEEEEEETTEEE
T ss_pred CCCCeECCCCCCCCCccEEEEEecCCeEEEEECC-------CeEEEECCCCCCceECccccC-CCCCeEEEEEECCCCEE
Confidence 4689988542 2222 223344457789887532 134443323578998764321 0122233433 468888
Q ss_pred EEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCeEEEE-CCEEEEEc
Q 020688 183 IVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RGRLHVMG 235 (322)
Q Consensus 183 v~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~~~~-~~~Lyi~G 235 (322)
+.|.. ..+++-+-.-.+|+.+.... +..-+.+... +++++++|
T Consensus 137 ~~~~~---------g~v~~S~DgG~tW~~~~~~~-~~~~~~~~~~~~~~~~~~g 180 (327)
T 2xbg_A 137 MITNV---------GAIYRTKDSGKNWQALVQEA-IGVMRNLNRSPSGEYVAVS 180 (327)
T ss_dssp EEETT---------CCEEEESSTTSSEEEEECSC-CCCEEEEEECTTSCEEEEE
T ss_pred EEeCC---------ccEEEEcCCCCCCEEeecCC-CcceEEEEEcCCCcEEEEE
Confidence 87641 12444333356799985422 2222333332 46676665
No 135
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=49.16 E-value=27 Score=30.18 Aligned_cols=62 Identities=13% Similarity=0.251 Sum_probs=35.9
Q ss_pred CCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCeEEEE--CCEEEEEccCCCCCCCCCcceeEeE
Q 020688 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIA 252 (322)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~~~~--~~~Lyi~GG~~~~~~~~~~~~~~i~ 252 (322)
++++++.|+. ...+..||..+.++..+..+.........+.+ ++++++.|+.+ ..+..|++.
T Consensus 19 ~~~~l~~~~~--------d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~ 82 (372)
T 1k8k_C 19 DRTQIAICPN--------NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD-----RNAYVWTLK 82 (372)
T ss_dssp TSSEEEEECS--------SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT-----SCEEEEEEE
T ss_pred CCCEEEEEeC--------CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC-----CeEEEEECC
Confidence 4556666654 35688899988877666544333322222322 56677777643 345566663
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=48.91 E-value=33 Score=29.14 Aligned_cols=76 Identities=12% Similarity=0.129 Sum_probs=40.1
Q ss_pred CEEEEEeecCCCCCccceEEEEECC--CCceeeCCCCCCCCCceeeEEEEe--CCEEEEEecccCCCCCCCCceEEEEEC
Q 020688 129 NLFYVFAGYGSLDYVHSHVDVYNFT--DNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~--t~~W~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yD~ 204 (322)
+.||+.+.. ...+.+||.. +.+++.+...+. ...-.+++.. +..||+.++.++ .-.++..|+
T Consensus 243 ~~l~v~~~~------~~~i~v~d~~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~------~v~v~~~d~ 308 (343)
T 1ri6_A 243 RHLYACDRT------ASLITVFSVSEDGSVLSKEGFQPT--ETQPRGFNVDHSGKYLIAAGQKSH------HISVYEIVG 308 (343)
T ss_dssp SEEEEEETT------TTEEEEEEECTTSCCEEEEEEEEC--SSSCCCEEECTTSSEEEEECTTTC------EEEEEEEET
T ss_pred CEEEEEecC------CCEEEEEEEcCCCCceEEeeeecC--CCccceEEECCCCCEEEEecCCCC------eEEEEEEcC
Confidence 467665432 1357888876 555665544332 1112223332 445776653211 123455588
Q ss_pred CCCcEEecCCCCCC
Q 020688 205 ETRKWDSIPPLPSP 218 (322)
Q Consensus 205 ~t~~W~~~~~~p~~ 218 (322)
.+.+++.+..++..
T Consensus 309 ~~g~~~~~~~~~~g 322 (343)
T 1ri6_A 309 EQGLLHEKGRYAVG 322 (343)
T ss_dssp TTTEEEEEEEEECS
T ss_pred CCceeeEccccccC
Confidence 88888887655543
No 137
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=48.86 E-value=33 Score=29.59 Aligned_cols=61 Identities=5% Similarity=-0.021 Sum_probs=34.9
Q ss_pred eEEEEECCCCceeeCCCCCCCCCceeeEEEE-eCCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCC
Q 020688 146 HVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP 214 (322)
Q Consensus 146 ~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~ 214 (322)
.++.+|..+.+++.+..... ...-..++. -+++||+.+...+ ...+.+||..+.+++.+..
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~--~~~p~~~a~spdg~l~~~~~~~~------~~~v~~~~~~~g~~~~~~~ 80 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAA--TQNPTYLALSAKDCLYSVDKEDD------EGGIAAWQIDGQTAHKLNT 80 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEE--CSCCCCEEECTTCEEEEEEEETT------EEEEEEEEEETTEEEEEEE
T ss_pred EEEEEcCCCCeEEEeeeeec--cCCcceEEEccCCeEEEEEecCC------CceEEEEEecCCcEEEeee
Confidence 37778888888776432221 111112232 2677887764211 3568899988777766643
No 138
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=47.80 E-value=1e+02 Score=30.48 Aligned_cols=66 Identities=8% Similarity=0.012 Sum_probs=39.0
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCC--CCCC-ceeeEEEE-eCCEEEEEecccCCCCCCCCceEEEEE
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMP--KDMA-HSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLD 203 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~--~p~~-r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yD 203 (322)
++.||+... +-+.+||+.+++|+...... .+.+ ..-.++.. -++.|++... .-+.+||
T Consensus 462 ~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~----------~Gl~~~~ 523 (795)
T 4a2l_A 462 EGNLWLGTL--------SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE----------EGLSVFK 523 (795)
T ss_dssp SSCEEEEES--------SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES----------SCEEEEE
T ss_pred CCCEEEEec--------CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC----------CceEEEe
Confidence 456766432 23899999999998865431 1001 11222333 2677887542 2378899
Q ss_pred CCCCcEEec
Q 020688 204 SETRKWDSI 212 (322)
Q Consensus 204 ~~t~~W~~~ 212 (322)
+.++++ ..
T Consensus 524 ~~~~~~-~~ 531 (795)
T 4a2l_A 524 QEGLDI-QK 531 (795)
T ss_dssp EETTEE-EE
T ss_pred CCCCeE-EE
Confidence 988888 54
No 139
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=47.70 E-value=1.4e+02 Score=26.07 Aligned_cols=152 Identities=9% Similarity=-0.027 Sum_probs=0.0
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCce-----eeCCCCCCCCCceeeEEEEeCC-EEEEEecccCCCCCCCCceEEE
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKW-----VDRFDMPKDMAHSHLGVVSDGR-YIYIVSGQYGPQCRGPTSRTFV 201 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W-----~~~~~~~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~~ 201 (322)
++.+++.|+.++. +.+||..+... +.+..+.............-++ .+++.|+. ...+..
T Consensus 93 ~~~~l~s~s~dg~------v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~--------dg~i~i 158 (402)
T 2aq5_A 93 NDNVIASGSEDCT------VMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC--------DNVILV 158 (402)
T ss_dssp CTTEEEEEETTSE------EEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET--------TSCEEE
T ss_pred CCCEEEEEeCCCe------EEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC--------CCEEEE
Q ss_pred EECCCCcEEecCCCCCCCCCCeEEEE--CCEEEEEccCCCCCCCCCcceeEeEEeccccccccccc-ccCCCCCcceEEE
Q 020688 202 LDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRT-EIPIPRGGPHRFA 278 (322)
Q Consensus 202 yD~~t~~W~~~~~~p~~r~~~~~~~~--~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~~~~~~W~~-~~p~pr~~~~~~~ 278 (322)
||..+.+....-...........+.+ ++.+++.|+.++ .+.+||.......... .............
T Consensus 159 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 228 (402)
T 2aq5_A 159 WDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDK----------RVRVIEPRKGTVVAEKDRPHEGTRPVHAVF 228 (402)
T ss_dssp EETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTS----------EEEEEETTTTEEEEEEECSSCSSSCCEEEE
T ss_pred EECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCC----------cEEEEeCCCCceeeeeccCCCCCcceEEEE
Q ss_pred EeCCEEEEEccccCCCCceEEeecc
Q 020688 279 GFPHVIYLSLVSSVEDLNFYVIQVP 303 (322)
Q Consensus 279 v~~~~iyi~GG~~~e~~~~~~~q~~ 303 (322)
.-++++++.|........+.++.+.
T Consensus 229 ~~~~~~l~~g~~~~~d~~i~iwd~~ 253 (402)
T 2aq5_A 229 VSEGKILTTGFSRMSERQVALWDTK 253 (402)
T ss_dssp CSTTEEEEEEECTTCCEEEEEEETT
T ss_pred cCCCcEEEEeccCCCCceEEEEcCc
No 140
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=47.70 E-value=1.3e+02 Score=26.76 Aligned_cols=65 Identities=8% Similarity=0.051 Sum_probs=32.8
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++++++.||.++ .+.+||..+.+-. ..+.. ....-.+++.. ++..++.|+. ...+..||..+
T Consensus 161 ~~~~l~sgs~D~------~i~iwd~~~~~~~--~~~~~-h~~~V~~v~~~p~~~~l~s~s~--------D~~i~~wd~~~ 223 (410)
T 1vyh_C 161 SGKLLASCSADM------TIKLWDFQGFECI--RTMHG-HDHNVSSVSIMPNGDHIVSASR--------DKTIKMWEVQT 223 (410)
T ss_dssp TSSEEEEEETTS------CCCEEETTSSCEE--ECCCC-CSSCEEEEEECSSSSEEEEEET--------TSEEEEEETTT
T ss_pred CCCEEEEEeCCC------eEEEEeCCCCcee--EEEcC-CCCCEEEEEEeCCCCEEEEEeC--------CCeEEEEECCC
Confidence 345666666432 2556777654422 22221 01122223332 4555666664 34688889887
Q ss_pred CcE
Q 020688 207 RKW 209 (322)
Q Consensus 207 ~~W 209 (322)
..-
T Consensus 224 ~~~ 226 (410)
T 1vyh_C 224 GYC 226 (410)
T ss_dssp CCE
T ss_pred CcE
Confidence 653
No 141
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=47.26 E-value=70 Score=27.74 Aligned_cols=64 Identities=5% Similarity=-0.058 Sum_probs=35.2
Q ss_pred ceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCE-EEEEecccCCCCCCCCceEEEEECCCCcEEecCC
Q 020688 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRY-IYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPP 214 (322)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~ 214 (322)
..++++|+.+.+...+.... .........- ++. |+.... .... .....++.+|..+.++..+..
T Consensus 168 ~~l~~~d~~~g~~~~~~~~~---~~~~~~~~sp~dg~~l~~~~~-~~~~--~~~~~l~~~d~~~~~~~~l~~ 233 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQDT---AWLGHPIYRPFDDSTVGFCHE-GPHD--LVDARMWLVNEDGSNVRKIKE 233 (396)
T ss_dssp EEEEEEETTTCCEEEEEEES---SCEEEEEEETTEEEEEEEEEC-SCSS--SCSCCCEEEETTSCCCEESSC
T ss_pred ceEEEEECCCCcEEeeccCC---cccccceECCCCCCEEEEEec-CCCC--CCCceEEEEECCCCceeEeec
Confidence 46899999888876655322 1122222222 343 544432 1111 012578999998888777754
No 142
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=47.25 E-value=97 Score=29.99 Aligned_cols=75 Identities=19% Similarity=0.271 Sum_probs=47.1
Q ss_pred ceEEEEECCCCc--eeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECCCCc--EEecCCCCCCCC
Q 020688 145 SHVDVYNFTDNK--WVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK--WDSIPPLPSPRY 220 (322)
Q Consensus 145 ~~v~~yd~~t~~--W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~--W~~~~~~p~~r~ 220 (322)
..+..+|+.+.+ |+.-...+ .....+++.++.+|+ |.. ...+.+||.+|.+ |+.- ++....
T Consensus 453 G~l~A~D~~tG~~~W~~~~~~~----~~~g~~~tagg~vf~-gt~--------dg~l~A~D~~tG~~lW~~~--l~~g~~ 517 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKMERFA----VWGGTMATAGDLVFY-GTL--------DGYLKARDSDTGDLLWKFK--IPSGAI 517 (599)
T ss_dssp EEEEEECTTTCCEEEEEEESSC----CCSBCEEETTTEEEE-ECT--------TSEEEEEETTTCCEEEEEE--CSSCCC
T ss_pred CeEEEEECCCCCEEeEecCCCC----ccCcceEecCCEEEE-ECC--------CCeEEEEECCCCCEEEEee--CCCCcE
Confidence 468889998876 87633322 222235567888887 421 3468999999875 8763 333222
Q ss_pred -CCeEEEECCEEEEE
Q 020688 221 -SPATQLWRGRLHVM 234 (322)
Q Consensus 221 -~~~~~~~~~~Lyi~ 234 (322)
.+.....+|++||.
T Consensus 518 ~~P~~y~~~G~qyv~ 532 (599)
T 1w6s_A 518 GYPMTYTHKGTQYVA 532 (599)
T ss_dssp SCCEEEEETTEEEEE
T ss_pred eccEEEEeCCEEEEE
Confidence 23333579998885
No 143
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=46.69 E-value=1.4e+02 Score=25.71 Aligned_cols=67 Identities=13% Similarity=0.044 Sum_probs=36.5
Q ss_pred cceEEEEECCCCceeeCCCCCCCCCceeeEEEE-eCC-EEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCC
Q 020688 144 HSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGR-YIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLP 216 (322)
Q Consensus 144 ~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p 216 (322)
...++.+|..+.....+..... .......+. -++ .|+......+.. ...++++|+.+.+-+.+..++
T Consensus 215 ~~~l~~~d~~~~~~~~l~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~----~~~l~~~d~~~g~~~~l~~~~ 283 (388)
T 3pe7_A 215 DARMWLINEDGTNMRKVKTHAE--GESCTHEFWVPDGSALVYVSYLKGSP----DRFIYSADPETLENRQLTSMP 283 (388)
T ss_dssp SCSEEEEETTSCCCEESCCCCT--TEEEEEEEECTTSSCEEEEEEETTCC----CEEEEEECTTTCCEEEEEEEC
T ss_pred cceEEEEeCCCCceEEeeeCCC--CcccccceECCCCCEEEEEecCCCCC----cceEEEEecCCCceEEEEcCC
Confidence 3469999998877666654331 111212222 244 454443222211 235999999998876664443
No 144
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=46.55 E-value=1.4e+02 Score=25.72 Aligned_cols=94 Identities=11% Similarity=0.012 Sum_probs=51.0
Q ss_pred EEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe--CCEEEEEecccCCCCCCCCceEEEEECCCC
Q 020688 130 LFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 130 ~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~ 207 (322)
++++.|+.+ ..+.+||..+.+......... ....-.+++.. ++.+++.|+. ...+..+|..+.
T Consensus 87 ~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~--------d~~i~iwd~~~~ 151 (383)
T 3ei3_B 87 TTVAVGSKG------GDIILWDYDVQNKTSFIQGMG-PGDAITGMKFNQFNTNQLFVSSI--------RGATTLRDFSGS 151 (383)
T ss_dssp TEEEEEEBT------SCEEEEETTSTTCEEEECCCS-TTCBEEEEEEETTEEEEEEEEET--------TTEEEEEETTSC
T ss_pred CEEEEEcCC------CeEEEEeCCCcccceeeecCC-cCCceeEEEeCCCCCCEEEEEeC--------CCEEEEEECCCC
Confidence 577777753 248889998877665443311 02233334443 3466666654 346888999877
Q ss_pred cEEecCCCCCCCCCCeEE--EECCEEEEEccCC
Q 020688 208 KWDSIPPLPSPRYSPATQ--LWRGRLHVMGGSK 238 (322)
Q Consensus 208 ~W~~~~~~p~~r~~~~~~--~~~~~Lyi~GG~~ 238 (322)
....+............+ .-++++++.|+.+
T Consensus 152 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 184 (383)
T 3ei3_B 152 VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST 184 (383)
T ss_dssp EEEEEECCCCSSCCEEEEEEETTTTEEEEEETT
T ss_pred ceEEEeccCCCCCCeEEEEECCCCCEEEEECCC
Confidence 666654322111111222 2256666777643
No 145
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=46.14 E-value=72 Score=28.70 Aligned_cols=93 Identities=4% Similarity=-0.035 Sum_probs=45.7
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE-eCCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++.+++.|+.++ .+.++|..++.-..+...... .....++.. -++.+++.|+.+ ..+..+|..+
T Consensus 176 ~~~~l~s~s~D~------~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~~d--------g~i~~wd~~~ 240 (435)
T 4e54_B 176 NTNQFYASSMEG------TTRLQDFKGNILRVFASSDTI-NIWFCSLDVSASSRMVVTGDNV--------GNVILLNMDG 240 (435)
T ss_dssp CTTEEEEECSSS------CEEEEETTSCEEEEEECCSSC-SCCCCCEEEETTTTEEEEECSS--------SBEEEEESSS
T ss_pred CCCEEEEEeCCC------EEEEeeccCCceeEEeccCCC-CccEEEEEECCCCCEEEEEeCC--------CcEeeeccCc
Confidence 344556665432 377889887765543322210 111222333 356677777643 4577888765
Q ss_pred CcEEecCCCCCCCCCCeEEEE---CCEEEEEccCC
Q 020688 207 RKWDSIPPLPSPRYSPATQLW---RGRLHVMGGSK 238 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~---~~~Lyi~GG~~ 238 (322)
.. +..+.........+.+ ++.+++.|+.+
T Consensus 241 ~~---~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 241 KE---LWNLRMHKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp CB---CCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred ce---eEEEecccceEEeeeecCCCceEEEEecCc
Confidence 43 2222222222223333 23466677653
No 146
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=45.27 E-value=1.4e+02 Score=25.93 Aligned_cols=66 Identities=12% Similarity=0.094 Sum_probs=32.8
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCC--ceeeCCCCCCCCCceeeEEEEe--CCEEEEEecccCCCCCCCCceEEEEE
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDN--KWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLD 203 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~--~W~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yD 203 (322)
++++++.|+.+ ..+.+||..+. ....+..+.. ....-.+++.. ++.+++.|+.+ ..+..||
T Consensus 78 ~~~~l~~~~~d------g~v~vw~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~d--------g~v~iwd 142 (416)
T 2pm9_A 78 NNKIIAGALDN------GSLELYSTNEANNAINSMARFSN-HSSSVKTVKFNAKQDNVLASGGNN--------GEIFIWD 142 (416)
T ss_dssp SSSCEEEEESS------SCEEEECCSSTTSCCCEEEECCC-SSSCCCEEEECSSSTTBEEEECSS--------SCEEBCB
T ss_pred CCCeEEEEccC------CeEEEeecccccccccchhhccC-CccceEEEEEcCCCCCEEEEEcCC--------CeEEEEE
Confidence 45566666643 24788888761 1112222221 01122233333 25667777643 3577788
Q ss_pred CCCCc
Q 020688 204 SETRK 208 (322)
Q Consensus 204 ~~t~~ 208 (322)
..+.+
T Consensus 143 ~~~~~ 147 (416)
T 2pm9_A 143 MNKCT 147 (416)
T ss_dssp TTTTS
T ss_pred CCCCc
Confidence 87654
No 147
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=45.05 E-value=18 Score=31.34 Aligned_cols=65 Identities=8% Similarity=0.068 Sum_probs=34.6
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE--eCCEEEEEecccCCCCCCCCceEEEEECC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
+++||+.+..+. ...+++||..+.+++.+...... ...-..++. .+..||+.+.. ...+.+||..
T Consensus 50 dg~l~~~~~~~~----~~~v~~~~~~~g~~~~~~~~~~~-~~~p~~~a~spdg~~l~~~~~~--------~~~v~v~~~~ 116 (347)
T 3hfq_A 50 KDCLYSVDKEDD----EGGIAAWQIDGQTAHKLNTVVAP-GTPPAYVAVDEARQLVYSANYH--------KGTAEVMKIA 116 (347)
T ss_dssp TCEEEEEEEETT----EEEEEEEEEETTEEEEEEEEEEE-SCCCSEEEEETTTTEEEEEETT--------TTEEEEEEEC
T ss_pred CCeEEEEEecCC----CceEEEEEecCCcEEEeeeeecC-CCCCEEEEECCCCCEEEEEeCC--------CCEEEEEEeC
Confidence 677877764321 24588999888777665442210 111112333 24467776521 2456777764
No 148
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=44.81 E-value=1.5e+02 Score=25.40 Aligned_cols=80 Identities=4% Similarity=0.088 Sum_probs=39.9
Q ss_pred eEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCeE
Q 020688 146 HVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPAT 224 (322)
Q Consensus 146 ~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~ 224 (322)
.+.+||..+.+-... +.. ....-.+++.. ++.+++.|+.+ ..+..||..+.+-... +.........
T Consensus 165 ~i~~wd~~~~~~~~~--~~~-h~~~v~~~~~~~~~~~l~sg~~d--------~~v~~wd~~~~~~~~~--~~~h~~~v~~ 231 (340)
T 1got_B 165 TCALWDIETGQQTTT--FTG-HTGDVMSLSLAPDTRLFVSGACD--------ASAKLWDVREGMCRQT--FTGHESDINA 231 (340)
T ss_dssp CEEEEETTTTEEEEE--ECC-CSSCEEEEEECTTSSEEEEEETT--------SCEEEEETTTCSEEEE--ECCCSSCEEE
T ss_pred cEEEEECCCCcEEEE--EcC-CCCceEEEEECCCCCEEEEEeCC--------CcEEEEECCCCeeEEE--EcCCcCCEEE
Confidence 488889887764332 211 01122233332 56677777653 4577888877643221 1111111222
Q ss_pred EEE--CCEEEEEccCC
Q 020688 225 QLW--RGRLHVMGGSK 238 (322)
Q Consensus 225 ~~~--~~~Lyi~GG~~ 238 (322)
+.+ ++.+++.|+.+
T Consensus 232 v~~~p~~~~l~s~s~d 247 (340)
T 1got_B 232 ICFFPNGNAFATGSDD 247 (340)
T ss_dssp EEECTTSSEEEEEETT
T ss_pred EEEcCCCCEEEEEcCC
Confidence 222 56777777753
No 149
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=44.32 E-value=1.3e+02 Score=24.62 Aligned_cols=90 Identities=8% Similarity=0.073 Sum_probs=49.6
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++.||+.... ...+.+||+. .+..... ++.. ...-.++++. ++.||+.... ...+.+||+.
T Consensus 30 ~g~l~v~~~~------~~~v~~~~~~-~~~~~~~-~~~~-~~~~~~i~~~~~g~l~v~~~~--------~~~v~~~d~~- 91 (300)
T 2qc5_A 30 DGKVWFTQHK------ANKISSLDQS-GRIKEFE-VPTP-DAKVMCLIVSSLGDIWFTENG--------ANKIGKLSKK- 91 (300)
T ss_dssp TSCEEEEETT------TTEEEEECTT-SCEEEEE-CSST-TCCEEEEEECTTSCEEEEETT--------TTEEEEECTT-
T ss_pred CCCEEEEcCC------CCeEEEECCC-CceEEEE-CCCC-CCcceeEEECCCCCEEEEecC--------CCeEEEECCC-
Confidence 5778886531 2458899988 6665532 2211 1223344443 5788887531 3468899988
Q ss_pred CcEEecCCCCC-CCCCCeEEEE-CCEEEEEcc
Q 020688 207 RKWDSIPPLPS-PRYSPATQLW-RGRLHVMGG 236 (322)
Q Consensus 207 ~~W~~~~~~p~-~r~~~~~~~~-~~~Lyi~GG 236 (322)
.+...+. ++. ...-.++++. +++||+...
T Consensus 92 g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~ 122 (300)
T 2qc5_A 92 GGFTEYP-LPQPDSGPYGITEGLNGDIWFTQL 122 (300)
T ss_dssp SCEEEEE-CSSTTCCEEEEEECSTTCEEEEET
T ss_pred CCeEEec-CCCCCCCCccceECCCCCEEEEcc
Confidence 6666542 121 1222233333 578888753
No 150
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=43.87 E-value=93 Score=29.03 Aligned_cols=135 Identities=12% Similarity=0.071 Sum_probs=66.2
Q ss_pred eEEEECCEEEEEeecCCCCCccceEEEEECCCCceee--CC----CCCCCCCceeeEEEE--eCCEEEEEecccCCCCCC
Q 020688 123 AAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD--RF----DMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRG 194 (322)
Q Consensus 123 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~--~~----~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~ 194 (322)
+++.+++++|+|-|. .+|+++.....+.. +. .+|. . .. ++.. .++++|+|=|
T Consensus 267 Ai~~~~ge~y~Fkg~--------~~wr~~~~~~~~~p~~I~~~Wp~LP~--~-iD-Aa~~~~~~g~~~fFKg-------- 326 (450)
T 1su3_A 267 AITTIRGEVMFFKDR--------FYMRTNPFYPEVELNFISVFWPQLPN--G-LE-AAYEFADRDEVRFFKG-------- 326 (450)
T ss_dssp EEEEETTEEEEEETT--------EEEECCTTSSSCEEEEGGGTCTTSCS--S-CC-EEEEEGGGTEEEEEET--------
T ss_pred eEEecCCeEEEEeCC--------EEEEEcCCCCcccceehhHhccCCCC--C-ee-EEEEEcCCCeEEEEeC--------
Confidence 456689999999872 35666544333221 11 2221 1 11 2222 3689999965
Q ss_pred CCceEEEEECCCCc--E-EecC---CCCC-CCCCCeEEEE--CCEEEEEccCCCCCCCCCcceeEeEEeccc--------
Q 020688 195 PTSRTFVLDSETRK--W-DSIP---PLPS-PRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGK-------- 257 (322)
Q Consensus 195 ~~~~~~~yD~~t~~--W-~~~~---~~p~-~r~~~~~~~~--~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~-------- 257 (322)
+.+|+|+..+-. + ..+. .+|. +..--++..+ ++++|+|=|.. .| +||..
T Consensus 327 --~~~W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG~~---------yw---~yd~~~~~~~~gY 392 (450)
T 1su3_A 327 --NKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVANK---------YW---RYDEYKRSMDPGY 392 (450)
T ss_dssp --TEEEEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEETTE---------EE---EEETTTTEECSSC
T ss_pred --CEEEEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeCCE---------EE---EEeCCCccccCCC
Confidence 356777643210 0 0010 1222 1112234444 58999997731 12 22221
Q ss_pred --ccccccccccCCCCCcceEEEEeCCEEEEEccccCCCC
Q 020688 258 --ALEKAWRTEIPIPRGGPHRFAGFPHVIYLSLVSSVEDL 295 (322)
Q Consensus 258 --~~~~~W~~~~p~pr~~~~~~~v~~~~iyi~GG~~~e~~ 295 (322)
...+.|.. +|..- .++...++++|+|-|...-+|
T Consensus 393 Pk~I~~~fpg---ip~~i-DAA~~~~g~~YFFkg~~ywr~ 428 (450)
T 1su3_A 393 PKMIAHDFPG---IGHKV-DAVFMKDGFFYFFHGTRQYKF 428 (450)
T ss_dssp SEEHHHHSTT---SCSCC-SEEEEETTEEEEEETTEEEEE
T ss_pred CcchhhcCCC---CCCCc-cEEEEcCCeEEEEeCCEEEEE
Confidence 11123432 23222 355567999999988654333
No 151
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=43.55 E-value=1.1e+02 Score=29.47 Aligned_cols=76 Identities=16% Similarity=0.184 Sum_probs=43.0
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCcee-eEEEEeCCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSH-LGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++++++.+..++ ...++.+|........+..-.. .... .+....++.||+.+..++.. ...++.+|..+
T Consensus 322 dg~~l~~~~~~g----~~~l~~~~~~~~~~~~l~~~~~--~v~~~~~~spdg~~l~~~~~~~~~~----~~~l~~~d~~~ 391 (706)
T 2z3z_A 322 NNQFIWQSRRDG----WNHLYLYDTTGRLIRQVTKGEW--EVTNFAGFDPKGTRLYFESTEASPL----ERHFYCIDIKG 391 (706)
T ss_dssp SSEEEEEECTTS----SCEEEEEETTSCEEEECCCSSS--CEEEEEEECTTSSEEEEEESSSCTT----CBEEEEEETTC
T ss_pred CCEEEEEEccCC----ccEEEEEECCCCEEEecCCCCe--EEEeeeEEcCCCCEEEEEecCCCCc----eEEEEEEEcCC
Confidence 567555554332 2458889977777776644322 2221 11212245677666443222 35789999988
Q ss_pred CcEEecC
Q 020688 207 RKWDSIP 213 (322)
Q Consensus 207 ~~W~~~~ 213 (322)
.+...+.
T Consensus 392 ~~~~~l~ 398 (706)
T 2z3z_A 392 GKTKDLT 398 (706)
T ss_dssp CCCEESC
T ss_pred CCceecc
Confidence 8776665
No 152
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=43.38 E-value=1e+02 Score=26.28 Aligned_cols=69 Identities=12% Similarity=0.162 Sum_probs=36.6
Q ss_pred CEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-C--CEEEEEecccCCCCCCCCceEEEEECC
Q 020688 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-G--RYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
+.+++.|+.+. .+.++|..+.+|.....+.. ....-.+++.. + +.+++.|+.+ ..+..+|..
T Consensus 71 ~~~l~s~s~D~------~v~iWd~~~~~~~~~~~~~~-h~~~V~~v~~~p~~~g~~lasgs~D--------~~i~lwd~~ 135 (316)
T 3bg1_A 71 GNILASCSYDR------KVIIWREENGTWEKSHEHAG-HDSSVNSVCWAPHDYGLILACGSSD--------GAISLLTYT 135 (316)
T ss_dssp SSCEEEEETTS------CEEEECCSSSCCCEEEEECC-CSSCCCEEEECCTTTCSCEEEECSS--------SCEEEEEEC
T ss_pred CCEEEEEECCC------EEEEEECCCCcceEEEEccC-CCCceEEEEECCCCCCcEEEEEcCC--------CCEEEEecC
Confidence 45666676532 37888988877755433221 01112223332 2 5566677653 346667776
Q ss_pred CC-cEEec
Q 020688 206 TR-KWDSI 212 (322)
Q Consensus 206 t~-~W~~~ 212 (322)
+. .|...
T Consensus 136 ~~~~~~~~ 143 (316)
T 3bg1_A 136 GEGQWEVK 143 (316)
T ss_dssp SSSCEEEC
T ss_pred CCCCccee
Confidence 54 57543
No 153
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=43.30 E-value=1.6e+02 Score=29.13 Aligned_cols=58 Identities=9% Similarity=0.164 Sum_probs=36.2
Q ss_pred eEEEEECCCCceeeCCCCCCCC-CceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCCCcEEecC
Q 020688 146 HVDVYNFTDNKWVDRFDMPKDM-AHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP 213 (322)
Q Consensus 146 ~v~~yd~~t~~W~~~~~~~~p~-~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~ 213 (322)
-+.+||+.+++++......... ...-.+++.. ++.|++... .-+.+||+.+++|+...
T Consensus 428 Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~----------~Gl~~~~~~~~~~~~~~ 487 (795)
T 4a2l_A 428 GLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL----------SALVRFNPEQRSFTTIE 487 (795)
T ss_dssp EEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES----------SCEEEEETTTTEEEECC
T ss_pred ceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec----------CceeEEeCCCCeEEEcc
Confidence 4889999998887754321100 1122233333 577887542 23788999999998875
No 154
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=43.08 E-value=1e+02 Score=25.69 Aligned_cols=99 Identities=10% Similarity=0.112 Sum_probs=50.8
Q ss_pred CCEEEEEeecCC-CCCccceEEEEECCCCceeeCCCCC-CCCCceeeEEEEe-C-CEEEEEecccCCCCCCCCceEEEEE
Q 020688 128 KNLFYVFAGYGS-LDYVHSHVDVYNFTDNKWVDRFDMP-KDMAHSHLGVVSD-G-RYIYIVSGQYGPQCRGPTSRTFVLD 203 (322)
Q Consensus 128 ~~~lyv~GG~~~-~~~~~~~v~~yd~~t~~W~~~~~~~-~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~~yD 203 (322)
++.+|+..+... .......+.+||+.+.++..+.... ......-.+++.. + ++||+... ...+.+||
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~---------~~~l~~~d 98 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM---------RLGLLVVQ 98 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET---------TTEEEEEE
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC---------CCCEEEEe
Confidence 567888721000 0001235899999888887653210 0001122344443 4 78998763 13588999
Q ss_pred CCCCcEEec-CCCCC--CCC-CCeEEE-ECCEEEEEcc
Q 020688 204 SETRKWDSI-PPLPS--PRY-SPATQL-WRGRLHVMGG 236 (322)
Q Consensus 204 ~~t~~W~~~-~~~p~--~r~-~~~~~~-~~~~Lyi~GG 236 (322)
+. .+...+ ..... +.. -..++. -+++||+...
T Consensus 99 ~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 135 (314)
T 1pjx_A 99 TD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAP 135 (314)
T ss_dssp TT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEEC
T ss_pred CC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEec
Confidence 98 777665 32211 111 122332 2567887653
No 155
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=43.00 E-value=1.4e+02 Score=24.57 Aligned_cols=93 Identities=11% Similarity=0.069 Sum_probs=48.7
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++.|||.+... ...+.+||+..+.-..+.... ...-.++++. +++||+.... ...+.+||+..
T Consensus 88 ~g~l~v~~~~~-----~~~i~~~d~~g~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~--------~~~i~~~~~~g 151 (286)
T 1q7f_A 88 SGDIIVTERSP-----THQIQIYNQYGQFVRKFGATI---LQHPRGVTVDNKGRIIVVECK--------VMRVIIFDQNG 151 (286)
T ss_dssp TTEEEEEECGG-----GCEEEEECTTSCEEEEECTTT---CSCEEEEEECTTSCEEEEETT--------TTEEEEECTTS
T ss_pred CCeEEEEcCCC-----CCEEEEECCCCcEEEEecCcc---CCCceEEEEeCCCCEEEEECC--------CCEEEEEcCCC
Confidence 67899876320 235888996555433332211 1122344443 6789987532 35688999876
Q ss_pred CcEEecCCCCCCCCCCeEEEE-CCEEEEEcc
Q 020688 207 RKWDSIPPLPSPRYSPATQLW-RGRLHVMGG 236 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~~~~~~~-~~~Lyi~GG 236 (322)
.....+........-.++++. +++||+.+.
T Consensus 152 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 152 NVLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp CEEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred CEEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 554444211111111223332 478888764
No 156
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=41.97 E-value=1.7e+02 Score=28.35 Aligned_cols=67 Identities=13% Similarity=0.131 Sum_probs=36.7
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE-eCCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++...++|+.+ ..+.+||..+.+....-.... ..-.+++. -++...++|+. ...+.+||..+
T Consensus 24 ~~~~la~~~~~------g~v~iwd~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~--------dg~i~vw~~~~ 86 (814)
T 3mkq_A 24 TEPWVLTTLYS------GRVEIWNYETQVEVRSIQVTE---TPVRAGKFIARKNWIIVGSD--------DFRIRVFNYNT 86 (814)
T ss_dssp SSSEEEEEETT------SEEEEEETTTTEEEEEEECCS---SCEEEEEEEGGGTEEEEEET--------TSEEEEEETTT
T ss_pred CCCEEEEEeCC------CEEEEEECCCCceEEEEecCC---CcEEEEEEeCCCCEEEEEeC--------CCeEEEEECCC
Confidence 45566666632 358899988776443222111 11122222 24555666654 24688899888
Q ss_pred CcEEe
Q 020688 207 RKWDS 211 (322)
Q Consensus 207 ~~W~~ 211 (322)
.+...
T Consensus 87 ~~~~~ 91 (814)
T 3mkq_A 87 GEKVV 91 (814)
T ss_dssp CCEEE
T ss_pred CcEEE
Confidence 76543
No 157
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=41.93 E-value=1.5e+02 Score=25.44 Aligned_cols=67 Identities=10% Similarity=0.033 Sum_probs=41.2
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECCCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~ 207 (322)
++.+|+++.. ...+++||+.+++..... .+. .....+..-++++++... ..+.+||+.+.
T Consensus 60 ~~~l~~~d~~------~~~i~~~d~~~~~~~~~~-~~~---~v~~i~~~~dg~l~v~~~----------~gl~~~d~~~g 119 (326)
T 2ghs_A 60 SGTAWWFNIL------ERELHELHLASGRKTVHA-LPF---MGSALAKISDSKQLIASD----------DGLFLRDTATG 119 (326)
T ss_dssp TTEEEEEEGG------GTEEEEEETTTTEEEEEE-CSS---CEEEEEEEETTEEEEEET----------TEEEEEETTTC
T ss_pred CCEEEEEECC------CCEEEEEECCCCcEEEEE-CCC---cceEEEEeCCCeEEEEEC----------CCEEEEECCCC
Confidence 3678887643 235899999887765432 221 111122234788877541 24889999888
Q ss_pred cEEecCC
Q 020688 208 KWDSIPP 214 (322)
Q Consensus 208 ~W~~~~~ 214 (322)
+...+..
T Consensus 120 ~~~~~~~ 126 (326)
T 2ghs_A 120 VLTLHAE 126 (326)
T ss_dssp CEEEEEC
T ss_pred cEEEEee
Confidence 8876643
No 158
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=41.74 E-value=1.3e+02 Score=31.18 Aligned_cols=93 Identities=6% Similarity=-0.100 Sum_probs=46.6
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECCCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR 207 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~ 207 (322)
+++..+.||.+ ..+.+||..+.+........ ..-.+++...+..++.|+. ...+..||..+.
T Consensus 1014 dg~~l~s~~~d------g~i~vwd~~~~~~~~~~~~~----~~v~~~~~~~~~~l~~~~~--------dg~v~vwd~~~~ 1075 (1249)
T 3sfz_A 1014 DGKTLISSSED------SVIQVWNWQTGDYVFLQAHQ----ETVKDFRLLQDSRLLSWSF--------DGTVKVWNVITG 1075 (1249)
T ss_dssp SSSCEEEECSS------SBEEEEETTTTEEECCBCCS----SCEEEEEECSSSEEEEEES--------SSEEEEEETTTT
T ss_pred CCCEEEEEcCC------CEEEEEECCCCceEEEecCC----CcEEEEEEcCCCcEEEEEC--------CCcEEEEECCCC
Confidence 45566666643 24888999888766443222 2223333333333455543 346888898776
Q ss_pred cEEecCCCCCCCCCCeEEEECCEEEEEccCC
Q 020688 208 KWDSIPPLPSPRYSPATQLWRGRLHVMGGSK 238 (322)
Q Consensus 208 ~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~ 238 (322)
+-...-......-......-++++++.|+.+
T Consensus 1076 ~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d 1106 (1249)
T 3sfz_A 1076 RIERDFTCHQGTVLSCAISSDATKFSSTSAD 1106 (1249)
T ss_dssp CCCEEEECCSSCCCCEEECSSSSSCEEECCS
T ss_pred ceeEEEcccCCcEEEEEECCCCCEEEEEcCC
Confidence 5222111111111112223356667777653
No 159
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=41.40 E-value=92 Score=26.30 Aligned_cols=92 Identities=9% Similarity=0.013 Sum_probs=41.8
Q ss_pred CEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe---CCEEEEEecccCCCCCCCCceEEEEECC
Q 020688 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD---GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
+.+++.|+.+ ..+.+||..+.+-........ .+.-..+... ++.+.+.|+. ...+..+|..
T Consensus 153 ~~~l~sgs~D------~~v~iwd~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~l~s~s~--------D~~i~iWd~~ 216 (304)
T 2ynn_A 153 PSTFASGCLD------RTVKVWSLGQSTPNFTLTTGQ--ERGVNYVDYYPLPDKPYMITASD--------DLTIKIWDYQ 216 (304)
T ss_dssp TTEEEEEETT------SEEEEEETTCSSCSEEEECCC--TTCEEEEEECCSTTCCEEEEEET--------TSEEEEEETT
T ss_pred CCEEEEEeCC------CeEEEEECCCCCccceeccCC--cCcEEEEEEEEcCCCCEEEEEcC--------CCeEEEEeCC
Confidence 3566677653 247788875543111000111 1221222221 4455566654 3467888887
Q ss_pred CCcEEecCCCCCCCCCCeEEEE--CCEEEEEccCC
Q 020688 206 TRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSK 238 (322)
Q Consensus 206 t~~W~~~~~~p~~r~~~~~~~~--~~~Lyi~GG~~ 238 (322)
+.+-.. .+.........+.+ ++.+++.|+.+
T Consensus 217 ~~~~~~--~~~~h~~~v~~~~~~p~~~~l~s~s~D 249 (304)
T 2ynn_A 217 TKSCVA--TLEGHMSNVSFAVFHPTLPIIISGSED 249 (304)
T ss_dssp TTEEEE--EEECCSSCEEEEEECSSSSEEEEEETT
T ss_pred CCccce--eeCCCCCCEEEEEECCCCCEEEEEcCC
Confidence 754221 12111222222222 45667777754
No 160
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=40.87 E-value=74 Score=27.86 Aligned_cols=99 Identities=11% Similarity=0.056 Sum_probs=50.3
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE--eCCEEEEEecccCCCCCCCCceEEEEECC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
++.+++.|+.+ ..+.+||..+.+-.. .+... ...-.+++. .++++.+.|+.+ ..+.+||..
T Consensus 238 ~~~~la~g~~d------~~i~~wd~~~~~~~~--~~~~~-~~~v~~l~~sp~~~~~lasgs~D--------~~i~iwd~~ 300 (357)
T 4g56_B 238 KDDTFACGDET------GNVSLVNIKNPDSAQ--TSAVH-SQNITGLAYSYHSSPFLASISED--------CTVAVLDAD 300 (357)
T ss_dssp STTEEEEEESS------SCEEEEESSCGGGCE--EECCC-SSCEEEEEECSSSSCCEEEEETT--------SCEEEECTT
T ss_pred ccceEEEeecc------cceeEEECCCCcEeE--EEecc-ceeEEEEEEcCCCCCEEEEEeCC--------CEEEEEECC
Confidence 35677777643 237888987654221 12210 112223333 234556666543 357888988
Q ss_pred CCcEEecCCCCCCCCCCeEEEE---CCEEEEEccCCCCCCCCCcceeEe
Q 020688 206 TRKWDSIPPLPSPRYSPATQLW---RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 206 t~~W~~~~~~p~~r~~~~~~~~---~~~Lyi~GG~~~~~~~~~~~~~~i 251 (322)
+.+-.+.-. .......+.+ ++.+++.||.+ ..+..|++
T Consensus 301 ~~~~~~~~~---H~~~V~~vafsP~d~~~l~s~s~D-----g~v~iW~~ 341 (357)
T 4g56_B 301 FSEVFRDLS---HRDFVTGVAWSPLDHSKFTTVGWD-----HKVLHHHL 341 (357)
T ss_dssp SCEEEEECC---CSSCEEEEEECSSSTTEEEEEETT-----SCEEEEEC
T ss_pred CCcEeEECC---CCCCEEEEEEeCCCCCEEEEEcCC-----CeEEEEEC
Confidence 776444321 1112222333 56777888754 34556655
No 161
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=39.59 E-value=1.7e+02 Score=30.31 Aligned_cols=66 Identities=11% Similarity=0.039 Sum_probs=37.0
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++++.+.||.++ .+.+||..+.+-... +.. ....-.+++.. ++++.+.|+. ...+.+||..+
T Consensus 626 ~~~~l~s~~~d~------~i~vw~~~~~~~~~~--~~~-h~~~v~~~~~s~~~~~l~s~~~--------d~~v~vwd~~~ 688 (1249)
T 3sfz_A 626 DGQRIASCGADK------TLQVFKAETGEKLLD--IKA-HEDEVLCCAFSSDDSYIATCSA--------DKKVKIWDSAT 688 (1249)
T ss_dssp TSSEEEEEETTS------CEEEEETTTCCEEEE--ECC-CSSCEEEEEECTTSSEEEEEET--------TSEEEEEETTT
T ss_pred CCCEEEEEeCCC------eEEEEECCCCCEEEE--ecc-CCCCEEEEEEecCCCEEEEEeC--------CCeEEEEECCC
Confidence 566667777432 488899888764332 211 01122223322 5556666653 34688999988
Q ss_pred CcEE
Q 020688 207 RKWD 210 (322)
Q Consensus 207 ~~W~ 210 (322)
.+-.
T Consensus 689 ~~~~ 692 (1249)
T 3sfz_A 689 GKLV 692 (1249)
T ss_dssp CCEE
T ss_pred CceE
Confidence 7543
No 162
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=38.77 E-value=1.8e+02 Score=24.71 Aligned_cols=105 Identities=7% Similarity=0.087 Sum_probs=51.3
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCC--CceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEEC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTD--NKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDS 204 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t--~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~ 204 (322)
+++.++.|+.+. .+.++|... ..++.+..+..- ...-.+++.. ++.+++.|+.+ ..+..+|.
T Consensus 118 ~g~~las~s~D~------~v~iwd~~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~D--------~~i~iW~~ 182 (330)
T 2hes_X 118 DGYYLATCSRDK------SVWIWETDESGEEYECISVLQEH-SQDVKHVIWHPSEALLASSSYD--------DTVRIWKD 182 (330)
T ss_dssp TSCEEEEEETTS------CEEEEECCTTCCCCEEEEEECCC-SSCEEEEEECSSSSEEEEEETT--------SCEEEEEE
T ss_pred CCCEEEEEeCCC------EEEEEeccCCCCCeEEEEEeccC-CCceEEEEECCCCCEEEEEcCC--------CeEEEEEC
Confidence 456666676532 377888743 334433333220 1111222222 45666777653 34667777
Q ss_pred CCCcEEecCCCCCCCCCCeEEEE--C--CEEEEEccCCCCCCCCCcceeEeE
Q 020688 205 ETRKWDSIPPLPSPRYSPATQLW--R--GRLHVMGGSKENRHTPGLEHWSIA 252 (322)
Q Consensus 205 ~t~~W~~~~~~p~~r~~~~~~~~--~--~~Lyi~GG~~~~~~~~~~~~~~i~ 252 (322)
.+..|..+..+.........+.+ + +.+++.|+.+ ..+..|++.
T Consensus 183 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D-----~~v~iw~~~ 229 (330)
T 2hes_X 183 YDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD-----STVRVWKYM 229 (330)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETT-----SCEEEEEEE
T ss_pred CCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC-----CeEEEEEec
Confidence 77777665444322222222222 1 3455666643 456667764
No 163
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=38.66 E-value=1e+02 Score=25.05 Aligned_cols=62 Identities=10% Similarity=0.095 Sum_probs=37.6
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceee-----CC-CCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEE
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD-----RF-DMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFV 201 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~-----~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~ 201 (322)
++++|+|-| +..|+||..+++-.. +. .-+. .|..--++...++++|.+-| +..++
T Consensus 109 ~g~~yfFkg--------~~ywr~d~~~~~~~~gyPr~i~~~w~G-vp~~idaa~~~~g~~Yffkg----------~~y~~ 169 (195)
T 1itv_A 109 RGKMLLFSG--------RRLWRFDVKAQMVDPRSASEVDRMFPG-VPLDTHDVFQFREKAYFCQD----------RFYWR 169 (195)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEECGGGCEEHHHHSTT-SCSSCSEEEEETTEEEEEET----------TEEEE
T ss_pred CCeEEEEeC--------CEEEEEeCCcccccCCCccChhhcCCC-CCCCCCEEEEeCCeEEEEeC----------CEEEE
Confidence 679999977 458999987754321 11 0111 01222344445799999975 35778
Q ss_pred EECCCCc
Q 020688 202 LDSETRK 208 (322)
Q Consensus 202 yD~~t~~ 208 (322)
||..+.+
T Consensus 170 ~~~~~~~ 176 (195)
T 1itv_A 170 VSSRSEL 176 (195)
T ss_dssp EECCTTC
T ss_pred EECCccE
Confidence 8876654
No 164
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=38.47 E-value=2.1e+02 Score=25.36 Aligned_cols=95 Identities=9% Similarity=0.115 Sum_probs=48.4
Q ss_pred EECCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECC
Q 020688 126 QIKNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 126 ~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
..++..++.|+.+ ..+.+||..+.+-...-... ...-.++.. ++..++.|+. ...+..||..
T Consensus 286 ~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~---~~~v~~~~~-~~~~l~~~~~--------dg~i~vwd~~ 347 (445)
T 2ovr_B 286 QFDGIHVVSGSLD------TSIRVWDVETGNCIHTLTGH---QSLTSGMEL-KDNILVSGNA--------DSTVKIWDIK 347 (445)
T ss_dssp EECSSEEEEEETT------SCEEEEETTTCCEEEEECCC---CSCEEEEEE-ETTEEEEEET--------TSCEEEEETT
T ss_pred EECCCEEEEEeCC------CeEEEEECCCCCEEEEEcCC---cccEEEEEE-eCCEEEEEeC--------CCeEEEEECC
Confidence 3456666666643 24888898776533211111 112223333 3445556653 2458889987
Q ss_pred CCcEEecCCCCC-CCCCCeEEEECCEEEEEccCC
Q 020688 206 TRKWDSIPPLPS-PRYSPATQLWRGRLHVMGGSK 238 (322)
Q Consensus 206 t~~W~~~~~~p~-~r~~~~~~~~~~~Lyi~GG~~ 238 (322)
+.+-...-..+. .......+.+++.+++.|+.+
T Consensus 348 ~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d 381 (445)
T 2ovr_B 348 TGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDD 381 (445)
T ss_dssp TCCEEEEECSTTSCSSCEEEEEECSSEEEEEETT
T ss_pred CCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCC
Confidence 765332211111 222334455677777888753
No 165
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=38.08 E-value=1.8e+02 Score=25.27 Aligned_cols=124 Identities=11% Similarity=-0.017 Sum_probs=0.0
Q ss_pred ceEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCeE
Q 020688 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPAT 224 (322)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~ 224 (322)
..+.+||..+.+-....... ......+...++.+++.|+. ...+..||..+.+-...-......-....
T Consensus 78 ~~v~i~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~--------dg~i~iwd~~~~~~~~~~~~h~~~v~~~~ 146 (420)
T 3vl1_A 78 GHDFLFNTIIRDGSKMLKRA---DYTAVDTAKLQMRRFILGTT--------EGDIKVLDSNFNLQREIDQAHVSEITKLK 146 (420)
T ss_dssp TEEEEEECCSEETTTTSCSC---CEEEEEEECSSSCEEEEEET--------TSCEEEECTTSCEEEEETTSSSSCEEEEE
T ss_pred CcEEEEEecccceeeEEecC---CceEEEEEecCCCEEEEEEC--------CCCEEEEeCCCcceeeecccccCccEEEE
Q ss_pred EEECCEEEEEccCCCCCCCCCcceeEeEEecccccccccccccCCCCCcceEEEEe-CCEEEEEcccc
Q 020688 225 QLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRFAGF-PHVIYLSLVSS 291 (322)
Q Consensus 225 ~~~~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~~~~~~W~~~~p~pr~~~~~~~v~-~~~iyi~GG~~ 291 (322)
..-++++++.|+.++ .+.+||.. +.+-.....-......+++.. ++..++.|+.+
T Consensus 147 ~~~~~~~l~s~s~d~----------~i~iwd~~--~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 202 (420)
T 3vl1_A 147 FFPSGEALISSSQDM----------QLKIWSVK--DGSNPRTLIGHRATVTDIAIIDRGRNVLSASLD 202 (420)
T ss_dssp ECTTSSEEEEEETTS----------EEEEEETT--TCCCCEEEECCSSCEEEEEEETTTTEEEEEETT
T ss_pred ECCCCCEEEEEeCCC----------eEEEEeCC--CCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCC
No 166
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=36.28 E-value=1.9e+02 Score=24.15 Aligned_cols=86 Identities=15% Similarity=0.244 Sum_probs=45.1
Q ss_pred EECCEEEEEeecCCCCCccceEEEEECC-CCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEE
Q 020688 126 QIKNLFYVFAGYGSLDYVHSHVDVYNFT-DNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLD 203 (322)
Q Consensus 126 ~~~~~lyv~GG~~~~~~~~~~v~~yd~~-t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD 203 (322)
..++.||+... ...+++||+. ...|+...+.+ ...+.+.. ++.||+... ...+.+||
T Consensus 105 ~~~~~l~v~t~-------~~~l~~~d~~g~~~~~~~~~~~-----~~~~~~~~~~g~l~vgt~---------~~~l~~~d 163 (330)
T 3hxj_A 105 IFEDILYVTSM-------DGHLYAINTDGTEKWRFKTKKA-----IYATPIVSEDGTIYVGSN---------DNYLYAIN 163 (330)
T ss_dssp EETTEEEEECT-------TSEEEEECTTSCEEEEEECSSC-----CCSCCEECTTSCEEEECT---------TSEEEEEC
T ss_pred EECCEEEEEec-------CCEEEEEcCCCCEEEEEcCCCc-----eeeeeEEcCCCEEEEEcC---------CCEEEEEC
Confidence 34888887431 1358899987 34476532211 11223444 677887431 24688899
Q ss_pred CCCC-cEEecCCCCCCCCCCeEEE-ECCEEEEEc
Q 020688 204 SETR-KWDSIPPLPSPRYSPATQL-WRGRLHVMG 235 (322)
Q Consensus 204 ~~t~-~W~~~~~~p~~r~~~~~~~-~~~~Lyi~G 235 (322)
+... .|..-.+ .... .+.+. -++.||+..
T Consensus 164 ~~g~~~~~~~~~--~~~~-~~~~~d~~g~l~v~t 194 (330)
T 3hxj_A 164 PDGTEKWRFKTN--DAIT-SAASIGKDGTIYFGS 194 (330)
T ss_dssp TTSCEEEEEECS--SCCC-SCCEECTTCCEEEES
T ss_pred CCCCEeEEEecC--CCce-eeeEEcCCCEEEEEe
Confidence 8722 3655422 1111 22233 366777654
No 167
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=36.24 E-value=1.5e+02 Score=24.84 Aligned_cols=81 Identities=16% Similarity=0.185 Sum_probs=40.6
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCc-eeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECC-
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK-WVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSE- 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~-W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~- 205 (322)
++.||+.. .+ +++||+..+. |... .+. . .....++.++.||+... ...+.+||+.
T Consensus 70 ~g~l~v~t--------~~-l~~~d~~g~~~~~~~--~~~--~-~~~~~~~~~~~l~v~t~---------~~~l~~~d~~g 126 (330)
T 3hxj_A 70 DGTIYFGS--------DK-VYAINPDGTEKWRFD--TKK--A-IVSDFTIFEDILYVTSM---------DGHLYAINTDG 126 (330)
T ss_dssp TTEECCSS--------CE-EEEECCCGGGGGGSC--C--------CCEEEETTEEEEECT---------TSEEEEECTTS
T ss_pred CCcEEEec--------Cc-EEEECCCCcEEEEEE--CCC--C-cccCceEECCEEEEEec---------CCEEEEEcCCC
Confidence 56777632 12 8889974332 5432 121 1 11223344899987531 2458889987
Q ss_pred CCcEEecCCCCCCCCCCeEEEE-CCEEEEE
Q 020688 206 TRKWDSIPPLPSPRYSPATQLW-RGRLHVM 234 (322)
Q Consensus 206 t~~W~~~~~~p~~r~~~~~~~~-~~~Lyi~ 234 (322)
...|....+.+. ..+.+.. ++.||+.
T Consensus 127 ~~~~~~~~~~~~---~~~~~~~~~g~l~vg 153 (330)
T 3hxj_A 127 TEKWRFKTKKAI---YATPIVSEDGTIYVG 153 (330)
T ss_dssp CEEEEEECSSCC---CSCCEECTTSCEEEE
T ss_pred CEEEEEcCCCce---eeeeEEcCCCEEEEE
Confidence 335765532221 1222333 5666664
No 168
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=36.22 E-value=1.7e+02 Score=25.94 Aligned_cols=50 Identities=12% Similarity=0.363 Sum_probs=28.5
Q ss_pred ceEEEEECCCCcEEecCCCCCCCCCCeEEEE--CCEEEEEccCCCCCCCCCcceeEe
Q 020688 197 SRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 197 ~~~~~yD~~t~~W~~~~~~p~~r~~~~~~~~--~~~Lyi~GG~~~~~~~~~~~~~~i 251 (322)
+.+..+|..+.+-.++-.+.........+.+ ++++++.|+.+ ..+..|++
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D-----g~v~iWd~ 176 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDV 176 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-----SCEEEEET
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC-----CeEEEEEc
Confidence 4688888888876665433332222233333 56778888754 34455554
No 169
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=35.99 E-value=2.1e+02 Score=24.57 Aligned_cols=69 Identities=7% Similarity=0.030 Sum_probs=35.0
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCC---CCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEE
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDM---PKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLD 203 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~---~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD 203 (322)
++ +++.|+.+ ..+.+||..+.+-...-.. ..+....-.+++.. ++.+++.|+.++. ...+..||
T Consensus 197 ~~-~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~-----~g~i~i~d 264 (397)
T 1sq9_A 197 RG-LIATGFNN------GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS-----FGCITLYE 264 (397)
T ss_dssp TS-EEEEECTT------SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETT-----EEEEEEEE
T ss_pred Cc-eEEEEeCC------CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCC-----CceEEEEE
Confidence 45 65666532 3588999887664332221 10001112222322 5566666664311 14688999
Q ss_pred CCCCc
Q 020688 204 SETRK 208 (322)
Q Consensus 204 ~~t~~ 208 (322)
..+.+
T Consensus 265 ~~~~~ 269 (397)
T 1sq9_A 265 TEFGE 269 (397)
T ss_dssp TTTCC
T ss_pred CCCCc
Confidence 87764
No 170
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=35.20 E-value=3.3e+02 Score=26.69 Aligned_cols=82 Identities=17% Similarity=0.304 Sum_probs=49.8
Q ss_pred CCCEEEcCCCCCCcccceEEEE-CCEEEEEeecCC---CCCccceEEEEECCCCceeeCCCCCCC--CCceeeE-EEEe-
Q 020688 106 DLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGS---LDYVHSHVDVYNFTDNKWVDRFDMPKD--MAHSHLG-VVSD- 177 (322)
Q Consensus 106 ~~~W~~~~~~p~~R~~~~~~~~-~~~lyv~GG~~~---~~~~~~~v~~yd~~t~~W~~~~~~~~p--~~r~~~~-~~~~- 177 (322)
-..|+.+..+|.....+.++.- ++.||+..+-.. .......+++++-...+|+.+.+.+.. ..+..++ +++.
T Consensus 231 G~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~~~~i~v~p 310 (737)
T 2cn3_A 231 GVTWKAVPGQPKGLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCFAGLAVDR 310 (737)
T ss_dssp TSCCEECTTCCCSSEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSSCTTSTTCCSEEEEEEECT
T ss_pred CCceEECCCCCCcccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCCCCCCcccccccccEEEcC
Confidence 5689999877654333333322 678998765321 011234689999999999998876541 1234443 3332
Q ss_pred --CCEEEEEecc
Q 020688 178 --GRYIYIVSGQ 187 (322)
Q Consensus 178 --~~~iyv~GG~ 187 (322)
.+.||+.+..
T Consensus 311 ~~~~~ly~~~~~ 322 (737)
T 2cn3_A 311 QNPDIIMVTSMN 322 (737)
T ss_dssp TCTTCEEEEEEC
T ss_pred CCCCEEEEEecc
Confidence 3678887643
No 171
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=34.98 E-value=1.8e+02 Score=23.65 Aligned_cols=89 Identities=10% Similarity=0.078 Sum_probs=47.8
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++.+|+.... ...+.+||+. .+..... ++.. ...-.++++. ++.||+.... ...+.+||+.
T Consensus 72 ~g~l~v~~~~------~~~v~~~d~~-g~~~~~~-~~~~-~~~~~~i~~~~~g~l~v~~~~--------~~~i~~~~~~- 133 (300)
T 2qc5_A 72 LGDIWFTENG------ANKIGKLSKK-GGFTEYP-LPQP-DSGPYGITEGLNGDIWFTQLN--------GDRIGKLTAD- 133 (300)
T ss_dssp TSCEEEEETT------TTEEEEECTT-SCEEEEE-CSST-TCCEEEEEECSTTCEEEEETT--------TTEEEEECTT-
T ss_pred CCCEEEEecC------CCeEEEECCC-CCeEEec-CCCC-CCCCccceECCCCCEEEEccC--------CCeEEEECCC-
Confidence 4678886431 2358999988 6665432 2211 2233445544 6789987532 2468889987
Q ss_pred CcEEecCCCCCCCCC-CeEEE-ECCEEEEEc
Q 020688 207 RKWDSIPPLPSPRYS-PATQL-WRGRLHVMG 235 (322)
Q Consensus 207 ~~W~~~~~~p~~r~~-~~~~~-~~~~Lyi~G 235 (322)
.+..... ++..... ..++. -+++||+..
T Consensus 134 g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~ 163 (300)
T 2qc5_A 134 GTIYEYD-LPNKGSYPAFITLGSDNALWFTE 163 (300)
T ss_dssp SCEEEEE-CSSTTCCEEEEEECTTSSEEEEE
T ss_pred CCEEEcc-CCCCCCCceeEEECCCCCEEEEe
Confidence 5555432 2211112 22333 246788765
No 172
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=33.94 E-value=1.4e+02 Score=25.12 Aligned_cols=93 Identities=9% Similarity=0.041 Sum_probs=47.8
Q ss_pred CEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe--CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
+.+++.|+.+ ..+.+||..+.+-...-.- . ...-.+++.. ++.+++.|+.+ ..+..||..+
T Consensus 85 ~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~-~--~~~i~~~~~~~~~~~~l~s~~~d--------g~i~iwd~~~ 147 (366)
T 3k26_A 85 HPLLAVAGSR------GIIRIINPITMQCIKHYVG-H--GNAINELKFHPRDPNLLLSVSKD--------HALRLWNIQT 147 (366)
T ss_dssp CEEEEEEETT------CEEEEECTTTCCEEEEEES-C--CSCEEEEEECSSCTTEEEEEETT--------SCEEEEETTT
T ss_pred CCEEEEecCC------CEEEEEEchhceEeeeecC-C--CCcEEEEEECCCCCCEEEEEeCC--------CeEEEEEeec
Confidence 4677777753 2588899877653321111 1 1222233332 56677777652 4588899887
Q ss_pred CcEEec-CCCCCCCCCCeEEEE--CCEEEEEccCC
Q 020688 207 RKWDSI-PPLPSPRYSPATQLW--RGRLHVMGGSK 238 (322)
Q Consensus 207 ~~W~~~-~~~p~~r~~~~~~~~--~~~Lyi~GG~~ 238 (322)
.+-... ..+.........+.+ ++..++.|+.+
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 182 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD 182 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCC
Confidence 654333 222222222223333 35566666653
No 173
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=33.87 E-value=2.2e+02 Score=24.14 Aligned_cols=125 Identities=10% Similarity=0.077 Sum_probs=60.7
Q ss_pred ceEEEEECCCCceeeCC-CCCCCCCceeeEEEEe--CCEEEEEecccCCCCCCCCceEEEEECCCC---cEEecCCCCCC
Q 020688 145 SHVDVYNFTDNKWVDRF-DMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETR---KWDSIPPLPSP 218 (322)
Q Consensus 145 ~~v~~yd~~t~~W~~~~-~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~---~W~~~~~~p~~ 218 (322)
..+++||+.+.+.+.+. .+.. + .++++. ++.|||.-.. ...+.+||+.+. ..+.+..++.
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~~--p---~gia~~~dg~~lyv~d~~--------~~~I~~~~~~~~~~~~~~~~~~~~g- 230 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELHV--P---GGAEVSADSSFVLVAEFL--------SHQIVKYWLEGPKKGTAEVLVKIPN- 230 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEESC--C---CEEEECTTSSEEEEEEGG--------GTEEEEEESSSTTTTCEEEEEECSS-
T ss_pred ceEEEEeCCCCEEEEeccCCcc--C---cceEECCCCCEEEEEeCC--------CCeEEEEECCCCcCCccceEEeCCC-
Confidence 45999999887765432 2222 1 234443 3468887421 357889988752 3443332322
Q ss_pred CCCCeEEEE-CCEEEEEccCCCCCCCCCcceeEeEEecccccccccccccCCC----CCcceEEEEeCCEEEEEc
Q 020688 219 RYSPATQLW-RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIP----RGGPHRFAGFPHVIYLSL 288 (322)
Q Consensus 219 r~~~~~~~~-~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~~~~~~W~~~~p~p----r~~~~~~~v~~~~iyi~G 288 (322)
...+++. +|.|||...............-.+.+||++ .+. ......| -.....++.-++.|||..
T Consensus 231 --P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~--G~~-~~~~~~~~g~~~~~~~~~~~~~g~L~v~~ 300 (322)
T 2fp8_A 231 --PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF--GNI-LEVIPLPPPFAGEHFEQIQEHDGLLYIGT 300 (322)
T ss_dssp --EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT--SCE-EEEEECCTTTTTSCCCEEEEETTEEEEEC
T ss_pred --CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC--CCE-EEEEECCCCCccccceEEEEeCCEEEEee
Confidence 1223332 467888753210000000112246677764 222 1111122 122234555689999875
No 174
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=33.36 E-value=2.3e+02 Score=24.31 Aligned_cols=66 Identities=9% Similarity=-0.131 Sum_probs=34.4
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++++++.|+.++ .+.+||.....-..+.... ..-.+++.. ++..++.|+. ...+..||..+
T Consensus 119 ~~~~l~~~~~dg------~i~i~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~--------d~~i~iwd~~~ 180 (425)
T 1r5m_A 119 DGNSIVTGVENG------ELRLWNKTGALLNVLNFHR----APIVSVKWNKDGTHIISMDV--------ENVTILWNVIS 180 (425)
T ss_dssp TSSEEEEEETTS------CEEEEETTSCEEEEECCCC----SCEEEEEECTTSSEEEEEET--------TCCEEEEETTT
T ss_pred CCCEEEEEeCCC------eEEEEeCCCCeeeeccCCC----ccEEEEEECCCCCEEEEEec--------CCeEEEEECCC
Confidence 456667776532 3788885444433333222 122233332 4555555553 24578888877
Q ss_pred CcEEe
Q 020688 207 RKWDS 211 (322)
Q Consensus 207 ~~W~~ 211 (322)
.+-..
T Consensus 181 ~~~~~ 185 (425)
T 1r5m_A 181 GTVMQ 185 (425)
T ss_dssp TEEEE
T ss_pred CcEEE
Confidence 65443
No 175
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=33.27 E-value=1.5e+02 Score=24.93 Aligned_cols=52 Identities=13% Similarity=0.091 Sum_probs=29.1
Q ss_pred eCCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCeEEEE-CC-EEEEEcc
Q 020688 177 DGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW-RG-RLHVMGG 236 (322)
Q Consensus 177 ~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~~~~-~~-~Lyi~GG 236 (322)
.++++|+.++. ...+.++|+.+.+....-+.+.......++.. ++ .+|+.+.
T Consensus 9 ~~~~~~v~~~~--------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~ 62 (349)
T 1jmx_B 9 AGHEYMIVTNY--------PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN 62 (349)
T ss_dssp TTCEEEEEEET--------TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET
T ss_pred CCCEEEEEeCC--------CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeC
Confidence 36788888754 35789999988765443222221012233332 34 5777764
No 176
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=33.17 E-value=2.5e+02 Score=24.55 Aligned_cols=82 Identities=11% Similarity=0.033 Sum_probs=46.4
Q ss_pred ceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCe
Q 020688 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPA 223 (322)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~ 223 (322)
..+.+||..+.+......... ...-.+++.. ++.+++.|+.+ ..+..||..+.+-... +........
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~~--~~~v~~v~~s~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~--~~~~~~~v~ 180 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETDE--STYVASVKWSHDGSFLSVGLGN--------GLVDIYDVESQTKLRT--MAGHQARVG 180 (401)
T ss_dssp TEEEEEETTTCCEEEEEECCT--TCCEEEEEECTTSSEEEEEETT--------SCEEEEETTTCCEEEE--ECCCSSCEE
T ss_pred CeEEEeeCCCCcEeEeeecCC--CCCEEEEEECCCCCEEEEECCC--------CeEEEEECcCCeEEEE--ecCCCCceE
Confidence 358999998888765544432 2222233332 55566666542 3578899887754332 112222334
Q ss_pred EEEECCEEEEEccCC
Q 020688 224 TQLWRGRLHVMGGSK 238 (322)
Q Consensus 224 ~~~~~~~Lyi~GG~~ 238 (322)
.+.+++.+++.|+.+
T Consensus 181 ~~~~~~~~l~~~~~d 195 (401)
T 4aez_A 181 CLSWNRHVLSSGSRS 195 (401)
T ss_dssp EEEEETTEEEEEETT
T ss_pred EEEECCCEEEEEcCC
Confidence 455577777777754
No 177
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=33.16 E-value=2.2e+02 Score=24.72 Aligned_cols=135 Identities=9% Similarity=0.012 Sum_probs=0.0
Q ss_pred CCEEEEEeecCCCCCccceEEEEECC-CCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFT-DNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~-t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++.+++.|+.++. +.+||.. +.+=...-.-.. .........-++..++.|+. ...+..||..+
T Consensus 217 ~~~~l~sgs~D~~------v~~wd~~~~~~~~~~~~~h~--~~v~~v~~~p~~~~l~s~s~--------D~~i~lwd~~~ 280 (380)
T 3iz6_a 217 NANMFISGSCDTT------VRLWDLRITSRAVRTYHGHE--GDINSVKFFPDGQRFGTGSD--------DGTCRLFDMRT 280 (380)
T ss_dssp SCCEEEEEETTSC------EEEEETTTTCCCCEEECCCS--SCCCEEEECTTSSEEEEECS--------SSCEEEEETTT
T ss_pred CCCEEEEEECCCe------EEEEECCCCCcceEEECCcC--CCeEEEEEecCCCeEEEEcC--------CCeEEEEECCC
Q ss_pred CcEEecCCCCCCC-------CCCeEEEECCEEEEEccCCCCCCCCCcceeEeEEecccccccccccccCCCCCcceEEEE
Q 020688 207 RKWDSIPPLPSPR-------YSPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGPHRFAG 279 (322)
Q Consensus 207 ~~W~~~~~~p~~r-------~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~~~~~~W~~~~p~pr~~~~~~~v 279 (322)
.+-...-.....+ -...+...++++++.|+. ...+..|++. +.+-.........+ |...+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~-----dg~i~vwd~~-------~~~~~~~~~~~~~~-h~~~v 347 (380)
T 3iz6_a 281 GHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS-----NGDCYVWDTL-------LAEMVLNLGTLQNS-HEGRI 347 (380)
T ss_dssp TEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECT-----TSCEEEEETT-------TCCEEEEECCSCSS-CCCCC
T ss_pred CcEEEEecccccccccccCceEEEEECCCCCEEEEEEC-----CCCEEEEECC-------CCceEEEEecccCC-CCCce
Q ss_pred e------CCEEEEEcccc
Q 020688 280 F------PHVIYLSLVSS 291 (322)
Q Consensus 280 ~------~~~iyi~GG~~ 291 (322)
. ++..++.||.+
T Consensus 348 ~~l~~s~dg~~l~sgs~D 365 (380)
T 3iz6_a 348 SCLGLSSDGSALCTGSWD 365 (380)
T ss_dssp CEEEECSSSSEEEEECTT
T ss_pred EEEEECCCCCEEEEeeCC
No 178
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=32.89 E-value=2.1e+02 Score=23.65 Aligned_cols=95 Identities=16% Similarity=0.206 Sum_probs=50.6
Q ss_pred eEEEECCEEEEEeecCCCCCccceEEEEECCC-Ccee-----eCCC-CCCCCC--ceeeEEEE---eCCEEEEEecccCC
Q 020688 123 AAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTD-NKWV-----DRFD-MPKDMA--HSHLGVVS---DGRYIYIVSGQYGP 190 (322)
Q Consensus 123 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t-~~W~-----~~~~-~~~p~~--r~~~~~~~---~~~~iyv~GG~~~~ 190 (322)
++...++++|+|-| +.+|+|+..+ .+-. .+.. ++.|.. ...--+++ .++++|.+-|
T Consensus 67 AA~~~~~~~yfFkG--------~~yw~~~~~~~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG---- 134 (219)
T 1hxn_A 67 AAFSWEDKLYLIQD--------TKVYVFLTKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG---- 134 (219)
T ss_dssp EEEEETTEEEEEET--------TEEEEEECSSSCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET----
T ss_pred EEEEECCcEEEecC--------CEEEEEeCCCCceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC----
Confidence 34445899999976 4589998653 2111 1111 122111 11223333 2689999976
Q ss_pred CCCCCCceEEEEECCCC---cEEecCCCCCCCCCCeEEE------------ECCEEEEEccC
Q 020688 191 QCRGPTSRTFVLDSETR---KWDSIPPLPSPRYSPATQL------------WRGRLHVMGGS 237 (322)
Q Consensus 191 ~~~~~~~~~~~yD~~t~---~W~~~~~~p~~r~~~~~~~------------~~~~Lyi~GG~ 237 (322)
+..++||..+. .|...+..|.. -.++.. .++.+|.|=|.
T Consensus 135 ------~~ywr~d~~~~P~~i~~~~~g~p~~--vdAa~~~~~~~~~~~~~~~~~~~YFFkg~ 188 (219)
T 1hxn_A 135 ------RRLWWLDLKSGAQATWTELPWPHEK--VDGALCMEKPLGPNSCSTSGPNLYLIHGP 188 (219)
T ss_dssp ------TEEEEEEGGGGGGCCCEEECCSCSC--CSEEEEESSCSSSCCSCSSSCEEEEEETT
T ss_pred ------CEEEEEeCCCCceEhhhcCCCCCCC--cCEEEEccccccccceeccCCeEEEEECC
Confidence 45788986542 34443333222 223334 34678888774
No 179
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=32.82 E-value=2e+02 Score=25.22 Aligned_cols=25 Identities=16% Similarity=0.048 Sum_probs=16.6
Q ss_pred CCEEEEEecccCCCCCCCCceEEEEECCCCcEE
Q 020688 178 GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWD 210 (322)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~ 210 (322)
+++.++.|+.+ ..+..||..+.+-.
T Consensus 134 dg~~l~s~~~d--------~~i~iwd~~~~~~~ 158 (393)
T 1erj_A 134 DGKFLATGAED--------RLIRIWDIENRKIV 158 (393)
T ss_dssp TSSEEEEEETT--------SCEEEEETTTTEEE
T ss_pred CCCEEEEEcCC--------CeEEEEECCCCcEE
Confidence 56666777643 45788998876543
No 180
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=32.79 E-value=98 Score=27.33 Aligned_cols=66 Identities=8% Similarity=0.035 Sum_probs=36.3
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
+++.++.|+.+ ..+.+||..+.+-...-.-. ...-.+++.. ++...+.|+. ...+..||..+
T Consensus 134 dg~~l~s~~~d------~~i~iwd~~~~~~~~~~~~h---~~~v~~~~~~p~~~~l~s~s~--------d~~v~iwd~~~ 196 (393)
T 1erj_A 134 DGKFLATGAED------RLIRIWDIENRKIVMILQGH---EQDIYSLDYFPSGDKLVSGSG--------DRTVRIWDLRT 196 (393)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTEEEEEECCC---SSCEEEEEECTTSSEEEEEET--------TSEEEEEETTT
T ss_pred CCCEEEEEcCC------CeEEEEECCCCcEEEEEccC---CCCEEEEEEcCCCCEEEEecC--------CCcEEEEECCC
Confidence 56666777753 24888998877643321111 1222233332 4445555554 34678889887
Q ss_pred CcEE
Q 020688 207 RKWD 210 (322)
Q Consensus 207 ~~W~ 210 (322)
.+-.
T Consensus 197 ~~~~ 200 (393)
T 1erj_A 197 GQCS 200 (393)
T ss_dssp TEEE
T ss_pred CeeE
Confidence 7644
No 181
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=32.54 E-value=2.5e+02 Score=24.40 Aligned_cols=129 Identities=6% Similarity=-0.010 Sum_probs=59.6
Q ss_pred eEEEEECCCCceeeCCCCCCCCCceee-EE-EEeCCEEEEEecccCCCCCCCCceEEEEECCCCcEEecC--CCCCCCCC
Q 020688 146 HVDVYNFTDNKWVDRFDMPKDMAHSHL-GV-VSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP--PLPSPRYS 221 (322)
Q Consensus 146 ~v~~yd~~t~~W~~~~~~~~p~~r~~~-~~-~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~--~~p~~r~~ 221 (322)
.+.+++..+..-........ ..... ++ ..-++..++.++.++.. ...+..+|.......... .+......
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~--~~~~v~~v~fspdg~~l~~~s~d~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 271 (365)
T 4h5i_A 198 SLEVISTVTGSCIARKTDFD--KNWSLSKINFIADDTVLIAASLKKGK----GIVLTKISIKSGNTSVLRSKQVTNRFKG 271 (365)
T ss_dssp CEEEEETTTCCEEEEECCCC--TTEEEEEEEEEETTEEEEEEEESSSC----CEEEEEEEEETTEEEEEEEEEEESSCSC
T ss_pred eEEEEEeccCcceeeeecCC--CCCCEEEEEEcCCCCEEEEEecCCcc----eeEEeecccccceecceeeeeecCCCCC
Confidence 36667776665433222221 11211 22 22477877777765543 235667777665554321 11111111
Q ss_pred CeEEE--ECCEEEEEccCCCCCCCCCcceeEeEEecccccccccccccCCCCCcc-eEEEEe-CCEEEEEccccC
Q 020688 222 PATQL--WRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPIPRGGP-HRFAGF-PHVIYLSLVSSV 292 (322)
Q Consensus 222 ~~~~~--~~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~~~~~~W~~~~p~pr~~~-~~~~v~-~~~iyi~GG~~~ 292 (322)
...+. -++++++.|+.+ ..+..|++. +.+-.......+... .+++.. ++++++.|+.|.
T Consensus 272 V~~~~~Spdg~~lasgs~D-----~~V~iwd~~-------~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 272 ITSMDVDMKGELAVLASND-----NSIALVKLK-------DLSMSKIFKQAHSFAITEVTISPDSTYVASVSAAN 334 (365)
T ss_dssp EEEEEECTTSCEEEEEETT-----SCEEEEETT-------TTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTS
T ss_pred eEeEEECCCCCceEEEcCC-----CEEEEEECC-------CCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCC
Confidence 22222 267888888753 344555542 221111111122221 233333 778888877553
No 182
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=32.15 E-value=1.1e+02 Score=25.51 Aligned_cols=71 Identities=13% Similarity=0.147 Sum_probs=34.7
Q ss_pred CEEEEEeecCCCCCccceEEEEECC-CCceeeCCCCCCCCCceeeEEEE--eCCEEEEEecccCCCCCCCCceEEEEECC
Q 020688 129 NLFYVFAGYGSLDYVHSHVDVYNFT-DNKWVDRFDMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~-t~~W~~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
+.+|+.++. ...+.+||.. +.+.+.+...+. ...-.+++. .++.||+.+.. ...+.+||..
T Consensus 5 ~~l~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~--------~~~v~~~~~~ 68 (343)
T 1ri6_A 5 QTVYIASPE------SQQIHVWNLNHEGALTLTQVVDV--PGQVQPMVVSPDKRYLYVGVRP--------EFRVLAYRIA 68 (343)
T ss_dssp EEEEEEEGG------GTEEEEEEECTTSCEEEEEEEEC--SSCCCCEEECTTSSEEEEEETT--------TTEEEEEEEC
T ss_pred EEEEEeCCC------CCeEEEEEECCCCcEEEeeeEec--CCCCceEEECCCCCEEEEeecC--------CCeEEEEEec
Confidence 456666442 2357778764 444444332222 111122333 24557766532 1356666655
Q ss_pred --CCcEEecCCC
Q 020688 206 --TRKWDSIPPL 215 (322)
Q Consensus 206 --t~~W~~~~~~ 215 (322)
+.++..+..+
T Consensus 69 ~~~~~~~~~~~~ 80 (343)
T 1ri6_A 69 PDDGALTFAAES 80 (343)
T ss_dssp TTTCCEEEEEEE
T ss_pred CCCCceeecccc
Confidence 7777766433
No 183
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=31.73 E-value=2.8e+02 Score=24.71 Aligned_cols=135 Identities=4% Similarity=-0.047 Sum_probs=0.0
Q ss_pred CCEEEEEeecCCCCCccceEEEEECC--CCceeeCC---CCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEE
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFT--DNKWVDRF---DMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVL 202 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~--t~~W~~~~---~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~y 202 (322)
+..|++.|+. -..+.+||.. +.+-...- ..+ .+.......-+++.++.|+. ...+..+
T Consensus 114 ~~~l~~~~~~------dg~v~iwd~~~~~~~~~~~~~~~~~~---~~v~~~~~sp~~~~l~~~~~--------~g~v~~~ 176 (450)
T 2vdu_B 114 ESRLIACADS------DKSLLVFDVDKTSKNVLKLRKRFCFS---KRPNAISIAEDDTTVIIADK--------FGDVYSI 176 (450)
T ss_dssp SSEEEEEEGG------GTEEEEEEECSSSSSCEEEEEEEECS---SCEEEEEECTTSSEEEEEET--------TSEEEEE
T ss_pred CCEEEEEECC------CCeEEEEECcCCCCceeeeeecccCC---CCceEEEEcCCCCEEEEEeC--------CCcEEEE
Q ss_pred ECCCCcEEe----cCCCCCCCCCCeEEEEC---CEEEEEccCCCCCCCCCcceeEeEEecccccccccccc-cCCCCCcc
Q 020688 203 DSETRKWDS----IPPLPSPRYSPATQLWR---GRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTE-IPIPRGGP 274 (322)
Q Consensus 203 D~~t~~W~~----~~~~p~~r~~~~~~~~~---~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~~~~~~W~~~-~p~pr~~~ 274 (322)
|..+..-.. .-......-......-+ +++++.|+. ...+..|++. +.+.... ..--....
T Consensus 177 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~-----d~~i~vwd~~-------~~~~~~~~~~~h~~~v 244 (450)
T 2vdu_B 177 DINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDR-----DEHIKISHYP-------QCFIVDKWLFGHKHFV 244 (450)
T ss_dssp ETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEET-----TSCEEEEEES-------CTTCEEEECCCCSSCE
T ss_pred ecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcC-----CCcEEEEECC-------CCceeeeeecCCCCce
Q ss_pred eEEEEeCCEEEEEcccc
Q 020688 275 HRFAGFPHVIYLSLVSS 291 (322)
Q Consensus 275 ~~~~v~~~~iyi~GG~~ 291 (322)
.+++..++++++.|+.+
T Consensus 245 ~~~~~sd~~~l~s~~~d 261 (450)
T 2vdu_B 245 SSICCGKDYLLLSAGGD 261 (450)
T ss_dssp EEEEECSTTEEEEEESS
T ss_pred EEEEECCCCEEEEEeCC
No 184
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=31.61 E-value=1.3e+02 Score=24.93 Aligned_cols=90 Identities=10% Similarity=0.097 Sum_probs=44.9
Q ss_pred eEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCeEE
Q 020688 146 HVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQ 225 (322)
Q Consensus 146 ~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~~ 225 (322)
.+.++|..+..-........ +.........++.+++.+|.. ...+..||..+.+= +..+.........+
T Consensus 222 ~i~lwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~sg~~-------d~~i~iwd~~~~~~--~~~l~gH~~~V~~l 290 (318)
T 4ggc_A 222 HIRIWNVCSGACLSAVDAHS--QVCSILWSPHYKELISGHGFA-------QNQLVIWKYPTMAK--VAELKGHTSRVLSL 290 (318)
T ss_dssp EEEEEETTTCCEEEEEECSS--CEEEEEEETTTTEEEEEECTT-------TCCEEEEETTTCCE--EEEECCCSSCEEEE
T ss_pred EEEEEeccccccccccccee--eeeeeeecccccceEEEEEcC-------CCEEEEEECCCCcE--EEEEcCCCCCEEEE
Confidence 46777877766544332222 222222233356666655532 24588899877542 22222222222223
Q ss_pred EE--CCEEEEEccCCCCCCCCCcceeEe
Q 020688 226 LW--RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 226 ~~--~~~Lyi~GG~~~~~~~~~~~~~~i 251 (322)
.+ ++++++.||.+ ..+..|++
T Consensus 291 ~~spdg~~l~S~s~D-----~~v~iWd~ 313 (318)
T 4ggc_A 291 TMSPDGATVASAAAD-----ETLRLWRC 313 (318)
T ss_dssp EECTTSSCEEEEETT-----TEEEEECC
T ss_pred EEcCCCCEEEEEecC-----CeEEEEEC
Confidence 33 56777777753 34556665
No 185
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=30.42 E-value=2.4e+02 Score=23.56 Aligned_cols=22 Identities=9% Similarity=0.463 Sum_probs=14.2
Q ss_pred CEEEEEeecCCCCCccceEEEEECCCCc
Q 020688 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNK 156 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~ 156 (322)
+.+++.|+.+ ..+.+||..+.+
T Consensus 80 ~~~l~~~~~d------g~i~iwd~~~~~ 101 (357)
T 3i2n_A 80 QRYLATGDFG------GNLHIWNLEAPE 101 (357)
T ss_dssp TCCEEEEETT------SCEEEECTTSCS
T ss_pred CceEEEecCC------CeEEEEeCCCCC
Confidence 3666677643 247888887664
No 186
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=30.17 E-value=1.1e+02 Score=25.35 Aligned_cols=65 Identities=8% Similarity=0.055 Sum_probs=32.3
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCC--ceeeCCCCCCCCCceeeEEEEe---CCEEEEEecccCCCCCCCCceEEEE
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDN--KWVDRFDMPKDMAHSHLGVVSD---GRYIYIVSGQYGPQCRGPTSRTFVL 202 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~--~W~~~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~y 202 (322)
++++++.|+.+ ..+.+||..+. .++....+.. ....-.+++.. ++.+++.|+.+ ..+..|
T Consensus 22 ~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~d~~~l~s~~~d--------g~v~vw 86 (351)
T 3f3f_A 22 YGRHVATCSSD------QHIKVFKLDKDTSNWELSDSWRA-HDSSIVAIDWASPEYGRIIASASYD--------KTVKLW 86 (351)
T ss_dssp SSSEEEEEETT------SEEEEEEECSSSCCEEEEEEEEC-CSSCEEEEEECCGGGCSEEEEEETT--------SCEEEE
T ss_pred CCCEEEEeeCC------CeEEEEECCCCCCcceecceecc-CCCcEEEEEEcCCCCCCEEEEEcCC--------CeEEEE
Confidence 45566667643 24777776543 3444332221 01222233333 26677777653 346667
Q ss_pred ECCCC
Q 020688 203 DSETR 207 (322)
Q Consensus 203 D~~t~ 207 (322)
|..+.
T Consensus 87 d~~~~ 91 (351)
T 3f3f_A 87 EEDPD 91 (351)
T ss_dssp EECTT
T ss_pred ecCCC
Confidence 76553
No 187
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=30.03 E-value=3.3e+02 Score=26.42 Aligned_cols=84 Identities=19% Similarity=0.159 Sum_probs=48.5
Q ss_pred cceEEEEECCCC--c-eeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECCC--CcEEecCCCCCC
Q 020688 144 HSHVDVYNFTDN--K-WVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSET--RKWDSIPPLPSP 218 (322)
Q Consensus 144 ~~~v~~yd~~t~--~-W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t--~~W~~~~~~p~~ 218 (322)
.++++++|..+. + |+.+.+... .... .+...++.||+....+.. ...++.+|..+ ..|+.+-+-...
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~--~~~~-~~~~dg~~l~~~s~~~~~-----~~~l~~~d~~~~~~~~~~l~~~~~~ 364 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLK--AQWD-FVDGVGDQLWFVSGDGAP-----LKKIVRVDLSGSTPRFDTVVPESKD 364 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSS--SCEE-EEEEETTEEEEEECTTCT-----TCEEEEEECSSSSCEEEEEECCCSS
T ss_pred cceEEEEECCCCCCcccEEecCCCC--ceEE-EEeccCCEEEEEECCCCC-----CCEEEEEeCCCCccccEEEecCCCC
Confidence 457999998776 6 777654332 2222 233567888887543211 35799999887 579887432111
Q ss_pred CCCCeEEEECCEEEEEcc
Q 020688 219 RYSPATQLWRGRLHVMGG 236 (322)
Q Consensus 219 r~~~~~~~~~~~Lyi~GG 236 (322)
. -..+...+++|++...
T Consensus 365 ~-l~~~~~~~~~lv~~~~ 381 (741)
T 1yr2_A 365 N-LESVGIAGNRLFASYI 381 (741)
T ss_dssp E-EEEEEEEBTEEEEEEE
T ss_pred e-EEEEEEECCEEEEEEE
Confidence 1 1122334666666654
No 188
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=29.46 E-value=2.4e+02 Score=23.21 Aligned_cols=90 Identities=16% Similarity=0.220 Sum_probs=49.0
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCc--e-eeCCCCCCCCC-ceeeEEEE--eCCEEEEEecccCCCCCCCCceEEE
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK--W-VDRFDMPKDMA-HSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFV 201 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~--W-~~~~~~~~p~~-r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~ 201 (322)
++++|+|-| +..|+||..+-. + ..+..+..|.. ..--++.. .++++|.+-| +..++
T Consensus 87 ~~k~yfFkG--------~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG----------~~ywr 148 (218)
T 1gen_A 87 EEKAVFFAG--------NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG----------DKFWR 148 (218)
T ss_dssp TTEEEEEET--------TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET----------TEEEE
T ss_pred CCEEEEEeC--------CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC----------CEEEE
Confidence 689999977 458999852111 0 11222222111 11222333 3689999965 46889
Q ss_pred EECCCCcEEe-----c----CCCCCCCCCCeEEEEC--CEEEEEccC
Q 020688 202 LDSETRKWDS-----I----PPLPSPRYSPATQLWR--GRLHVMGGS 237 (322)
Q Consensus 202 yD~~t~~W~~-----~----~~~p~~r~~~~~~~~~--~~Lyi~GG~ 237 (322)
||..+++=.. + +.+ +..-.++...+ +++|+|=|.
T Consensus 149 ~d~~~~~v~~gyPr~i~~~w~g~--p~~idaAf~~~~~g~~YfFkg~ 193 (218)
T 1gen_A 149 YNEVKKKMDPGFPKLIADAWNAI--PDNLDAVVDLQGGGHSYFFKGA 193 (218)
T ss_dssp EETTTTEECSSCCEEHHHHSSSC--CSSCSEEEECTTTCEEEEEETT
T ss_pred EECccccccCCCCcchhhccCCC--CCCCCEEEEEcCCCcEEEEECC
Confidence 9987653211 1 122 22334555655 899999774
No 189
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=29.34 E-value=3.3e+02 Score=24.90 Aligned_cols=100 Identities=9% Similarity=0.055 Sum_probs=52.4
Q ss_pred CEEEEEeec-CCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE-eCCEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 129 NLFYVFAGY-GSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 129 ~~lyv~GG~-~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
++..+.|+. + ..+.+||..+.+... ..+... ...-.+++. -++++++.|+.+ ..+..||..+
T Consensus 456 ~~~l~~~~~~d------~~i~~~~~~~~~~~~-~~~~~~-~~~v~~~~~s~~g~~l~~~~~d--------g~i~iw~~~~ 519 (615)
T 1pgu_A 456 QNYVAVGLEEG------NTIQVFKLSDLEVSF-DLKTPL-RAKPSYISISPSETYIAAGDVM--------GKILLYDLQS 519 (615)
T ss_dssp SSEEEEEETTT------SCEEEEETTEEEEEE-ECSSCC-SSCEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CCEEEEeecCC------CeEEEEECCCccccc-cccCCc-cCceEEEEECCCCCEEEEcCCC--------CeEEEeeCCC
Confidence 555556653 2 248889988876542 222210 112222322 266667777642 4588899887
Q ss_pred CcEEecCCCCC-CCCCCeEEEE------------CCEEEEEccCCCCCCCCCcceeEe
Q 020688 207 RKWDSIPPLPS-PRYSPATQLW------------RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 207 ~~W~~~~~~p~-~r~~~~~~~~------------~~~Lyi~GG~~~~~~~~~~~~~~i 251 (322)
.+-.. .+.. .......+.+ ++++++.|+.+ ..+..|++
T Consensus 520 ~~~~~--~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~d-----g~i~iw~~ 570 (615)
T 1pgu_A 520 REVKT--SRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD-----TNIFIYSV 570 (615)
T ss_dssp TEEEE--CCSCCCSSCEEEEEECCCC------CCSCCEEEEEETT-----SCEEEEES
T ss_pred Cccee--EeecCCCCceeEEEEcCccccccccccCCCEEEEEcCC-----CcEEEEEC
Confidence 65332 2322 2222333344 67788888754 34555554
No 190
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=29.22 E-value=2.1e+02 Score=25.69 Aligned_cols=65 Identities=15% Similarity=0.187 Sum_probs=39.5
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCC------CCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEE
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFD------MPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTF 200 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~------~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~ 200 (322)
++++|+|-| +..|+||..+++-..--| .+. .+..--++... ++++|.+-| +..+
T Consensus 284 ~~~~yfFkG--------~~yw~yd~~~~~v~~gyPk~I~~~f~g-~p~~iDaA~~~~~g~~YfFkg----------~~yw 344 (365)
T 3ba0_A 284 FYRTYFFVD--------NQYWRYDERRQMMDPGYPKLITKNFQG-IGPKIDAVFYSKNKYYYFFQG----------SNQF 344 (365)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEECSSCCCCHHHHSTT-CCSSCSEEEEETTTEEEEEET----------TEEE
T ss_pred CCEEEEEEC--------CEEEEEeCCcceecCCCCcchhhcCCC-CCCccceeeEecCCcEEEEeC----------CEEE
Confidence 479999976 458999987665332111 111 12222233334 889999865 4688
Q ss_pred EEECCCCcEEe
Q 020688 201 VLDSETRKWDS 211 (322)
Q Consensus 201 ~yD~~t~~W~~ 211 (322)
+||..+.+-..
T Consensus 345 r~d~~~~~v~~ 355 (365)
T 3ba0_A 345 EYDFLLQRITK 355 (365)
T ss_dssp EEETTTTEEEE
T ss_pred EEECCccEEec
Confidence 99988766443
No 191
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=28.89 E-value=4.3e+02 Score=26.04 Aligned_cols=106 Identities=13% Similarity=0.158 Sum_probs=56.7
Q ss_pred CCCEEEcCCCCCCc---ccceEEEE----CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCC------------
Q 020688 106 DLEWEQMPSAPVPR---LDGAAIQI----KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKD------------ 166 (322)
Q Consensus 106 ~~~W~~~~~~p~~R---~~~~~~~~----~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p------------ 166 (322)
-..|+++..++..+ .......+ .+.||+.....+ .+++=+=.-.+|+.+..++..
T Consensus 164 G~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g------~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p~ 237 (763)
T 3a0f_A 164 AQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAVG------GLWVTWDGGANWSQVGGQPTQWSDWTKSIVAAS 237 (763)
T ss_dssp TSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESSTT------CEEEESSSSSSCEECTTCCCSCCHHHHHHHHHH
T ss_pred CcCccccccCcccCCCccceEEEEECCCCCCEEEEEEeCCC------eEEEECCCCCCccccCCCccccccccccccccc
Confidence 56899998766432 22222233 246777643211 243322235679988755420
Q ss_pred ------CCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCC
Q 020688 167 ------MAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPS 217 (322)
Q Consensus 167 ------~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~ 217 (322)
.++..+.+++. ++.||+...............+++.+-...+|+.+.+.|.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~g~v~rS~D~G~tW~~~~~~~~ 295 (763)
T 3a0f_A 238 GTAIQSSGPLPIKIALGKNGRLYITYSDAPGPWGVLYGEVWSYDPTNGNWKHITPSRE 295 (763)
T ss_dssp CCCCSSSSCEEEEEEECTTSCEEEEEESSCSSSCCCCEEEEEEETTTTEEEECCTTSS
T ss_pred cccccCCCCcceeEEECCCCcEEEEeccCCCCCCCcceeEEEEeCCCCceEECCCCCC
Confidence 12333344333 6788887532110000113578888888899999876543
No 192
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=28.82 E-value=2.7e+02 Score=23.63 Aligned_cols=19 Identities=5% Similarity=-0.034 Sum_probs=13.0
Q ss_pred eeeEEEEeCCEEEEEeccc
Q 020688 170 SHLGVVSDGRYIYIVSGQY 188 (322)
Q Consensus 170 ~~~~~~~~~~~iyv~GG~~ 188 (322)
..|++++-++++|.+|-..
T Consensus 72 ~~hs~~l~~G~v~~wG~n~ 90 (282)
T 3qhy_B 72 NYHSLALKDGEVIAWGGNE 90 (282)
T ss_dssp SSEEEEEETTEEEEEECCT
T ss_pred CCEEEEEECCEEEEeeCCC
Confidence 3455555689999998543
No 193
>4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis}
Probab=28.46 E-value=3.8e+02 Score=25.30 Aligned_cols=130 Identities=10% Similarity=0.052 Sum_probs=63.4
Q ss_pred EEEEEC-CCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCCCcEEecC----CCCCCCC
Q 020688 147 VDVYNF-TDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIP----PLPSPRY 220 (322)
Q Consensus 147 v~~yd~-~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~----~~p~~r~ 220 (322)
..+|.. ..++|+....++. ......++.. +|+|++.--....+. ..+..-.-.-.+|+... .+|.|.+
T Consensus 354 ~i~~S~D~G~TW~~~~~~~~--~~~e~~vve~~dG~L~~~~R~~~~g~----r~v~~S~D~G~TWt~~~~~~~~L~~P~c 427 (523)
T 4fj6_A 354 GIMYSKDRGKTWHLHNLART--NTTEAQVAEVEPGVLMLNMRDNRGGS----RAVATTKDLGKTWTEHPSSRSALQESVC 427 (523)
T ss_dssp EEEEESSTTSSCEECCCSEE--TEEEEEEEEEETTEEEEEEEETTCSB----CEEEEESSTTSSCEECTTTTTSSBCSSC
T ss_pred EEEEECCCCCeEEECCCCCc--cccCCEEEEecCCEEEEEEEecCCCc----EEEEEECCCCCccCcCcCccccCCCCCc
Confidence 344544 4578998655542 2334444444 789888532211111 12222222345899863 5666666
Q ss_pred CCeEEEEC-------CEEEEEccCCCCCCCCCcceeEeEEecccccccccccccCC----C-CCcceEEEEe-CCEEEEE
Q 020688 221 SPATQLWR-------GRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTEIPI----P-RGGPHRFAGF-PHVIYLS 287 (322)
Q Consensus 221 ~~~~~~~~-------~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~~~~~~W~~~~p~----p-r~~~~~~~v~-~~~iyi~ 287 (322)
..++..+. ..++++..-........+..+ ..+| +..+|.....+ + ..+..+++.+ ++.|.++
T Consensus 428 ~~Sii~~~~~~~~~g~~~lL~snp~~~~~R~~l~v~--~S~D---~G~TW~~~~~v~~~~~~~~~Ys~l~~~~dG~i~il 502 (523)
T 4fj6_A 428 MASLIKVNAKDNITGKDLLLFSNPNTTKGRNHITIK--ASLD---GGLTWPTEHQVLLDEAEGWGYSCLSMIDKETVGIF 502 (523)
T ss_dssp CCEEEEECGGGSTTCSCEEEEEEECCSSSSCCEEEE--EESS---TTSCCCGGGEEEEECSCCCCCEEEEECSSSEEEEE
T ss_pred ccEEEEEecccCCCCCcEEEEEccCCCCccccceEE--EeCC---CCCCCccCceEEEcCCCCcccceEEEcCCCEEEEE
Confidence 65555543 245555543211111122222 1234 26789864311 2 2333566665 6777776
No 194
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=27.50 E-value=98 Score=26.53 Aligned_cols=66 Identities=14% Similarity=0.177 Sum_probs=32.8
Q ss_pred EEEEeCCEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCC--CCeEEEE----CCEEEEEccCCCCCCCCCc
Q 020688 173 GVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRY--SPATQLW----RGRLHVMGGSKENRHTPGL 246 (322)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~--~~~~~~~----~~~Lyi~GG~~~~~~~~~~ 246 (322)
+++...+.+++.||.+ ..+..||..+.+|..+........ ....+.+ ++++++.||.++ .+
T Consensus 255 ~v~~s~~~~l~s~~~d--------g~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg-----~v 321 (330)
T 2hes_X 255 NVAWGFNGLIASVGAD--------GVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDG-----IV 321 (330)
T ss_dssp EEEECTTSCEEEEETT--------SCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTS-----EE
T ss_pred EEEEcCCCEEEEEeCC--------CEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCC-----cE
Confidence 3333344455666642 357778888888865532211111 1222222 456777777542 34
Q ss_pred ceeEe
Q 020688 247 EHWSI 251 (322)
Q Consensus 247 ~~~~i 251 (322)
..|++
T Consensus 322 ~~W~~ 326 (330)
T 2hes_X 322 NFWSL 326 (330)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 55554
No 195
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=27.15 E-value=2.5e+02 Score=23.23 Aligned_cols=60 Identities=13% Similarity=0.233 Sum_probs=37.0
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeC----C-CCCC----CCCceeeEEEE--eCCEEEEEecccCCCCCCCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDR----F-DMPK----DMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPT 196 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~----~-~~~~----p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~ 196 (322)
++++|+|-| +..|+||..+++...- . ..+. +.+..--++.. .++++|.+-|
T Consensus 127 ~gk~yfFkG--------~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG---------- 188 (225)
T 3oyo_A 127 GKEVYLFKG--------NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG---------- 188 (225)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET----------
T ss_pred CCcEEEEeC--------CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC----------
Confidence 689999987 4589999777655431 1 0110 00122223333 3789999965
Q ss_pred ceEEEEECC
Q 020688 197 SRTFVLDSE 205 (322)
Q Consensus 197 ~~~~~yD~~ 205 (322)
+..++||..
T Consensus 189 ~~ywr~d~~ 197 (225)
T 3oyo_A 189 QNYVRIDFT 197 (225)
T ss_dssp TEEEEEECC
T ss_pred CEEEEEeCC
Confidence 468899987
No 196
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=26.90 E-value=1.6e+02 Score=24.27 Aligned_cols=56 Identities=11% Similarity=0.069 Sum_probs=32.4
Q ss_pred ceEEEEECCCCceeeCCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECCCCcE
Q 020688 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSETRKW 209 (322)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W 209 (322)
++|.++|..+.+-.+.-.+... ...-.+++.. +++..+.|+.+ ..+..+|.++.+-
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~-~~~V~~v~~~~~~~~l~sgs~D--------g~v~iw~~~~~~~ 101 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQP-GEYISSVAWIKEGNYLAVGTSS--------AEVQLWDVQQQKR 101 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCST-TCCEEEEEECTTSSEEEEEETT--------SEEEEEETTTTEE
T ss_pred CEEEEEECCCCCEEEEEEecCC-CCeEEEEEECCCCCEEEEEECC--------CcEEEeecCCcee
Confidence 3588899988876654333321 1222233332 56667777653 4577788877653
No 197
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=26.19 E-value=1.7e+02 Score=27.19 Aligned_cols=63 Identities=19% Similarity=0.341 Sum_probs=38.2
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceee-----CC-CCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEE
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD-----RF-DMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFV 201 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~-----~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~ 201 (322)
++++|+|-| +..|+||..+++-.. +. ..+. .+..--++...++++|.+-| +..++
T Consensus 367 ~~k~yfFkG--------~~yw~yd~~~~~~~~gYPk~I~~~fpg-ip~~iDAA~~~~g~~YFFkg----------~~ywr 427 (450)
T 1su3_A 367 TGKTYFFVA--------NKYWRYDEYKRSMDPGYPKMIAHDFPG-IGHKVDAVFMKDGFFYFFHG----------TRQYK 427 (450)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEECSSCSEEHHHHSTT-SCSCCSEEEEETTEEEEEET----------TEEEE
T ss_pred CCeEEEEeC--------CEEEEEeCCCccccCCCCcchhhcCCC-CCCCccEEEEcCCeEEEEeC----------CEEEE
Confidence 589999977 468999977554321 11 0111 11122233346899999965 46788
Q ss_pred EECCCCcE
Q 020688 202 LDSETRKW 209 (322)
Q Consensus 202 yD~~t~~W 209 (322)
||..+.+=
T Consensus 428 ~d~~~~~v 435 (450)
T 1su3_A 428 FDPKTKRI 435 (450)
T ss_dssp EETTTTEE
T ss_pred EECCcceE
Confidence 88876653
No 198
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=26.00 E-value=2.7e+02 Score=22.81 Aligned_cols=146 Identities=14% Similarity=0.133 Sum_probs=67.0
Q ss_pred eEEEECCEEEEEeecCCCCCccceEEEEECCCCc-ee--eCC----CCCCCCCceeeEEEE-eCCEEEEEecccCCCCCC
Q 020688 123 AAIQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK-WV--DRF----DMPKDMAHSHLGVVS-DGRYIYIVSGQYGPQCRG 194 (322)
Q Consensus 123 ~~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~-W~--~~~----~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~ 194 (322)
+++.+++++|+|-|. .+|+++..... .. .+. .++ ..-..+... .++++|++-|
T Consensus 35 Ai~~~~g~~~fFkg~--------~~Wr~~~~~~~~~~P~~I~~~wp~lp---~~IDAA~~~~~~~k~yfFkG-------- 95 (218)
T 1gen_A 35 GIAQIRGEIFFFKDR--------FIWRTVTPRDKPMGPLLVATFWPELP---EKIDAVYEAPQEEKAVFFAG-------- 95 (218)
T ss_dssp EEEEETTEEEEEETT--------EEEEESSTTSCCEEEEEGGGTCTTSC---SCCSEEEEETTTTEEEEEET--------
T ss_pred EEEeCCCcEEEEECC--------EEEEEeCCCCccCCCEEHHHhcCCCC---CCccEEEEECCCCEEEEEeC--------
Confidence 445678999999872 35665543311 11 121 222 122222222 2689999965
Q ss_pred CCceEEEEECCCCcE---EecC--CCCCCC-CCCeEEEE--CCEEEEEccCCCCCCCCCcceeEeEEecccccccccccc
Q 020688 195 PTSRTFVLDSETRKW---DSIP--PLPSPR-YSPATQLW--RGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKAWRTE 266 (322)
Q Consensus 195 ~~~~~~~yD~~t~~W---~~~~--~~p~~r-~~~~~~~~--~~~Lyi~GG~~~~~~~~~~~~~~i~~yd~~~~~~~W~~~ 266 (322)
+..++||..+..- ..+. .+|... .-.++..+ ++++|+|=|..--++..... .++.--|+...+.|...
T Consensus 96 --~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG~~ywr~d~~~~--~v~~gyPr~i~~~w~g~ 171 (218)
T 1gen_A 96 --NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGDKFWRYNEVKK--KMDPGFPKLIADAWNAI 171 (218)
T ss_dssp --TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEETTEEEEEETTTT--EECSSCCEEHHHHSSSC
T ss_pred --CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEECCEEEEEECccc--cccCCCCcchhhccCCC
Confidence 4578888531100 0111 223211 22344443 68999997742111111000 00000011112345432
Q ss_pred cCCCCCcceEEEEeC--CEEEEEccccCCCC
Q 020688 267 IPIPRGGPHRFAGFP--HVIYLSLVSSVEDL 295 (322)
Q Consensus 267 ~p~pr~~~~~~~v~~--~~iyi~GG~~~e~~ 295 (322)
|..- .++...+ +++|+|-|...-+|
T Consensus 172 ---p~~i-daAf~~~~~g~~YfFkg~~y~~~ 198 (218)
T 1gen_A 172 ---PDNL-DAVVDLQGGGHSYFFKGAYYLKL 198 (218)
T ss_dssp ---CSSC-SEEEECTTTCEEEEEETTEEEEE
T ss_pred ---CCCC-CEEEEEcCCCcEEEEECCEEEEE
Confidence 3333 3555544 89999988654333
No 199
>3j1r_A Archaeal adhesion filament core; helical polymer, flagellar filament, cell adhesion, structur protein; 7.50A {Ignicoccus hospitalis}
Probab=25.15 E-value=71 Score=16.94 Aligned_cols=19 Identities=32% Similarity=0.480 Sum_probs=8.9
Q ss_pred hHHHHHHHHHHHH---HHHhhc
Q 020688 20 LCVLGLLGAALIA---DFMWAS 38 (322)
Q Consensus 20 ~~~~~~~~~~~~~---~~~~~~ 38 (322)
++.++++.+++.+ -|+|.|
T Consensus 5 VA~~lLIviav~aaVllylW~s 26 (26)
T 3j1r_A 5 IATLLLILIAVAAAVLLYTWVS 26 (26)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHhC
Confidence 3444444444443 366653
No 200
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=25.01 E-value=2.4e+02 Score=22.73 Aligned_cols=62 Identities=15% Similarity=0.192 Sum_probs=37.3
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceee-----CCCCCCCCCceeeEEEEe-CC-EEEEEecccCCCCCCCCceEE
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD-----RFDMPKDMAHSHLGVVSD-GR-YIYIVSGQYGPQCRGPTSRTF 200 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~-----~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~ 200 (322)
++++|+|-| +..|+||..+++-.. +...+. .+..--++... ++ ++|.+-| +..+
T Consensus 109 ~g~~yfFkG--------~~yw~yd~~~~~v~~gyPk~i~~~~g-ip~~idaAf~~~~~~~~YfFkg----------~~y~ 169 (196)
T 3c7x_A 109 NGKTYFFRG--------NKYYRFNEELRAVDSEYPKNIKVWEG-IPESPRGSFMGSDEVFTYFYKG----------NKYW 169 (196)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEECTTCSEEGGGSBT-CCSSCSEEEECTTSSEEEEEET----------TEEE
T ss_pred CCEEEEEEC--------CEEEEEeCCcccccCCCCccHHHCCC-cCCCcceeEEecCCCEEEEEEC----------CEEE
Confidence 589999977 458999987764322 111111 12222233333 44 8999965 4688
Q ss_pred EEECCCCc
Q 020688 201 VLDSETRK 208 (322)
Q Consensus 201 ~yD~~t~~ 208 (322)
+||..+++
T Consensus 170 r~d~~~~~ 177 (196)
T 3c7x_A 170 KFNNQKLK 177 (196)
T ss_dssp EEETTTTE
T ss_pred EEECCcce
Confidence 99987754
No 201
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=24.81 E-value=3.3e+02 Score=23.26 Aligned_cols=64 Identities=11% Similarity=-0.006 Sum_probs=32.6
Q ss_pred eEEEEECCCCceeeCCCCCCCC----CceeeEEEEeCCEEEEEe----cccCCCCCCCCceEEEEECCCCcEEecC
Q 020688 146 HVDVYNFTDNKWVDRFDMPKDM----AHSHLGVVSDGRYIYIVS----GQYGPQCRGPTSRTFVLDSETRKWDSIP 213 (322)
Q Consensus 146 ~v~~yd~~t~~W~~~~~~~~p~----~r~~~~~~~~~~~iyv~G----G~~~~~~~~~~~~~~~yD~~t~~W~~~~ 213 (322)
.++++|+.+.+-+.+..++... ..........+..|++.. |..... ...++.+|+.+.+-.++.
T Consensus 265 ~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~----~~~i~~~d~~~~~~~~l~ 336 (388)
T 3pe7_A 265 FIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEN----DPFLYVFNMKNGTQHRVA 336 (388)
T ss_dssp EEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CC----CCEEEEEETTTTEEEEEE
T ss_pred eEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCC----CCEEEEEeccCCceEEec
Confidence 4999999988866654443200 001112333344444321 111111 457999999998777664
No 202
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=24.38 E-value=4.8e+02 Score=25.03 Aligned_cols=86 Identities=15% Similarity=0.140 Sum_probs=49.3
Q ss_pred cceEEEEECCC------C--ceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECCCC---cEEec
Q 020688 144 HSHVDVYNFTD------N--KWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETR---KWDSI 212 (322)
Q Consensus 144 ~~~v~~yd~~t------~--~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~---~W~~~ 212 (322)
.++++++|..+ . .+..+..... . ........++.||+.+..+.. ...+..+|..+. .|+.+
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~--~-~~~~~s~dg~~l~~~s~~~~~-----~~~l~~~d~~~~~~~~~~~l 329 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNFE--G-EYDYVTNEGTVFTFKTNRHSP-----NYRLINIDFTDPEESKWKVL 329 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSSS--S-CEEEEEEETTEEEEEECTTCT-----TCEEEEEETTSCCGGGCEEE
T ss_pred ccEEEEEECcccccccCCccceEEeeCCCC--c-EEEEEeccCCEEEEEECCCCC-----CCEEEEEeCCCCCcccceec
Confidence 35799999875 3 5766654322 1 222344567889888754321 357899998875 58887
Q ss_pred CCCCCCCCCCeEEEE-CCEEEEEccC
Q 020688 213 PPLPSPRYSPATQLW-RGRLHVMGGS 237 (322)
Q Consensus 213 ~~~p~~r~~~~~~~~-~~~Lyi~GG~ 237 (322)
.+-.....-..+... +++|++....
T Consensus 330 ~~~~~~~~~~~~~~~~~~~lv~~~~~ 355 (710)
T 2xdw_A 330 VPEHEKDVLEWVACVRSNFLVLCYLH 355 (710)
T ss_dssp ECCCSSCEEEEEEEETTTEEEEEEEE
T ss_pred cCCCCCCeEEEEEEEcCCEEEEEEEE
Confidence 432111111123334 6777777654
No 203
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=24.24 E-value=3e+02 Score=23.59 Aligned_cols=65 Identities=8% Similarity=-0.028 Sum_probs=33.6
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCcee-eEEEE-eCCEEEEEecccCCCCCCCCceEEEEECC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSH-LGVVS-DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
++.+++.|+.++ .+.+||..+.+-........ .... .+++. .++.+.+.|+. ...+..||..
T Consensus 251 ~~~~l~s~s~D~------~v~lwd~~~~~~~~~~~~~~--~~~~~~~~~~s~~g~~l~~g~~--------d~~i~vwd~~ 314 (354)
T 2pbi_B 251 SGDAFASGSDDA------TCRLYDLRADREVAIYSKES--IIFGASSVDFSLSGRLLFAGYN--------DYTINVWDVL 314 (354)
T ss_dssp TSSEEEEEETTS------CEEEEETTTTEEEEEECCTT--CCSCEEEEEECTTSSEEEEEET--------TSCEEEEETT
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEEcCCC--cccceeEEEEeCCCCEEEEEEC--------CCcEEEEECC
Confidence 456667777532 47888987764322111111 1111 12222 25666666654 2457888886
Q ss_pred CCc
Q 020688 206 TRK 208 (322)
Q Consensus 206 t~~ 208 (322)
+.+
T Consensus 315 ~~~ 317 (354)
T 2pbi_B 315 KGS 317 (354)
T ss_dssp TCS
T ss_pred CCc
Confidence 654
No 204
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=24.15 E-value=1.6e+02 Score=28.19 Aligned_cols=59 Identities=15% Similarity=0.191 Sum_probs=35.1
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE--eCCEEEEEecccCCCCCCCCceEEEEECC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS--DGRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
++.+||.... .+.+.++|+.+.+-...-+.. ..-|.+++ .+.++|+.+. ...+.++|+.
T Consensus 166 ~~~~~V~~~~------~~~V~viD~~t~~v~~~i~~g----~~p~~v~~SpDGr~lyv~~~---------dg~V~viD~~ 226 (567)
T 1qks_A 166 ENLFSVTLRD------AGQIALIDGSTYEIKTVLDTG----YAVHISRLSASGRYLFVIGR---------DGKVNMIDLW 226 (567)
T ss_dssp GGEEEEEETT------TTEEEEEETTTCCEEEEEECS----SCEEEEEECTTSCEEEEEET---------TSEEEEEETT
T ss_pred CceEEEEeCC------CCeEEEEECCCCeEEEEEeCC----CCccceEECCCCCEEEEEcC---------CCeEEEEECC
Confidence 4577776532 246999999887654322222 22234444 3567887641 3469999985
No 205
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=23.95 E-value=95 Score=27.12 Aligned_cols=99 Identities=14% Similarity=0.112 Sum_probs=47.5
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe--CCEEEEEecccCCCCCCCCceEEEEECC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
++++++.|+.+ ..+.+||..+.+- +..+.. ....-.+++.. +.++.+.|+.+ ..+.+||..
T Consensus 226 ~~~~l~sg~~d------g~v~~wd~~~~~~--~~~~~~-h~~~v~~v~fsp~g~~~lasgs~D--------~~i~vwd~~ 288 (344)
T 4gqb_B 226 QSEVFVFGDEN------GTVSLVDTKSTSC--VLSSAV-HSQCVTGLVFSPHSVPFLASLSED--------CSLAVLDSS 288 (344)
T ss_dssp CTTEEEEEETT------SEEEEEESCC--C--CEEEEC-CSSCEEEEEECSSSSCCEEEEETT--------SCEEEECTT
T ss_pred CCcceEEeccC------CcEEEEECCCCcE--EEEEcC-CCCCEEEEEEccCCCeEEEEEeCC--------CeEEEEECC
Confidence 44577777643 2478889876542 222211 01122233332 33556666543 357788988
Q ss_pred CCcEEecCCCCCCCCCCeEEEE---CCEEEEEccCCCCCCCCCcceeEe
Q 020688 206 TRKWDSIPPLPSPRYSPATQLW---RGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 206 t~~W~~~~~~p~~r~~~~~~~~---~~~Lyi~GG~~~~~~~~~~~~~~i 251 (322)
+.+-.++.. .......+.+ +..|++.||.+ ..+..|++
T Consensus 289 ~~~~~~~~~---H~~~V~~v~~sp~~~~llas~s~D-----~~v~~w~v 329 (344)
T 4gqb_B 289 LSELFRSQA---HRDFVRDATWSPLNHSLLTTVGWD-----HQVVHHVV 329 (344)
T ss_dssp CCEEEEECC---CSSCEEEEEECSSSTTEEEEEETT-----SCEEEEEC
T ss_pred CCcEEEEcC---CCCCEEEEEEeCCCCeEEEEEcCC-----CeEEEEEC
Confidence 775433321 1111222333 34577777754 34455655
No 206
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=23.86 E-value=4.9e+02 Score=24.96 Aligned_cols=32 Identities=6% Similarity=0.060 Sum_probs=18.6
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDR 160 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~ 160 (322)
+++..+++....... ...++++|..+.+....
T Consensus 135 Dg~~la~~~~~~G~~-~~~i~v~d~~tg~~~~~ 166 (710)
T 2xdw_A 135 DGEYFAYGLSASGSD-WVTIKFMKVDGAKELPD 166 (710)
T ss_dssp TSSEEEEEEEETTCS-CEEEEEEETTTTEEEEE
T ss_pred CCCEEEEEEcCCCCc-eEEEEEEECCCCCCCcc
Confidence 455545544322111 23699999999887653
No 207
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=23.72 E-value=4.2e+02 Score=24.18 Aligned_cols=101 Identities=5% Similarity=0.025 Sum_probs=52.4
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEE-e----------CCEEEEEecccCCCCCCCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVS-D----------GRYIYIVSGQYGPQCRGPT 196 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~-~----------~~~iyv~GG~~~~~~~~~~ 196 (322)
++++++.|+.+ ..+.+||..+.+-... +.......-.+++. - ++++.+.|+.+
T Consensus 499 ~g~~l~~~~~d------g~i~iw~~~~~~~~~~--~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~d-------- 562 (615)
T 1pgu_A 499 SETYIAAGDVM------GKILLYDLQSREVKTS--RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD-------- 562 (615)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTEEEEC--CSCCCSSCEEEEEECCCC------CCSCCEEEEEETT--------
T ss_pred CCCEEEEcCCC------CeEEEeeCCCCcceeE--eecCCCCceeEEEEcCccccccccccCCCEEEEEcCC--------
Confidence 56777777753 2488899877654332 22100222222333 2 56777777643
Q ss_pred ceEEEEECCCC--cEEecCCCCCCCCCCeEEEECCEEEEEccCCCCCCCCCcceeEe
Q 020688 197 SRTFVLDSETR--KWDSIPPLPSPRYSPATQLWRGRLHVMGGSKENRHTPGLEHWSI 251 (322)
Q Consensus 197 ~~~~~yD~~t~--~W~~~~~~p~~r~~~~~~~~~~~Lyi~GG~~~~~~~~~~~~~~i 251 (322)
..+..||..+. .-..+..-..+. ......-+++ ++.||.+ ..+..|++
T Consensus 563 g~i~iw~~~~~~~~~~~~~~h~~~v-~~l~~s~~~~-l~s~~~d-----~~v~iw~~ 612 (615)
T 1pgu_A 563 TNIFIYSVKRPMKIIKALNAHKDGV-NNLLWETPST-LVSSGAD-----ACIKRWNV 612 (615)
T ss_dssp SCEEEEESSCTTCCEEETTSSTTCE-EEEEEEETTE-EEEEETT-----SCEEEEEE
T ss_pred CcEEEEECCCCceechhhhcCccce-EEEEEcCCCC-eEEecCC-----ceEEEEee
Confidence 35888998875 233332111111 1122345778 7777743 34566665
No 208
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=23.61 E-value=3.1e+02 Score=22.63 Aligned_cols=50 Identities=18% Similarity=0.046 Sum_probs=25.3
Q ss_pred CEEEEEecccCCCCCCCCceEEEEECCCCcEEecCCCCCCCCCCeEEEE--CCEEEEEccCC
Q 020688 179 RYIYIVSGQYGPQCRGPTSRTFVLDSETRKWDSIPPLPSPRYSPATQLW--RGRLHVMGGSK 238 (322)
Q Consensus 179 ~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~W~~~~~~p~~r~~~~~~~~--~~~Lyi~GG~~ 238 (322)
+.+++.||.+ ..+..||..+.+-...- .........+.+ ++++++.|+.+
T Consensus 185 ~~~~~s~~~d--------~~i~i~d~~~~~~~~~~--~~h~~~v~~~~~s~~~~~l~s~s~D 236 (340)
T 4aow_A 185 NPIIVSCGWD--------KLVKVWNLANCKLKTNH--IGHTGYLNTVTVSPDGSLCASGGKD 236 (340)
T ss_dssp SCEEEEEETT--------SCEEEEETTTTEEEEEE--CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CcEEEEEcCC--------CEEEEEECCCCceeeEe--cCCCCcEEEEEECCCCCEEEEEeCC
Confidence 3455556542 35778888876543321 111111222222 56777777754
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=23.50 E-value=3.8e+02 Score=23.59 Aligned_cols=75 Identities=11% Similarity=-0.043 Sum_probs=39.1
Q ss_pred CEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCC-CCCceEEEEECCCC
Q 020688 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCR-GPTSRTFVLDSETR 207 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~-~~~~~~~~yD~~t~ 207 (322)
..+|+.-+...... . .+.+||+.+.+-. ..++.. ...+......+..+|+..-....... ...+.+.+||+.+.
T Consensus 33 ~~~yv~~~~~~~~~-~-~v~v~D~~t~~~~--~~i~~g-~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~ 107 (373)
T 2mad_H 33 RRSYINLPAHHSAI-I-QQWVLDAGSGSIL--GHVNGG-FLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF 107 (373)
T ss_pred CEEEEeCCcccCCc-c-EEEEEECCCCeEE--EEecCC-CCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC
Confidence 46777653111111 1 6899999887643 333331 11233333356789998532111100 01467889999875
Q ss_pred c
Q 020688 208 K 208 (322)
Q Consensus 208 ~ 208 (322)
+
T Consensus 108 ~ 108 (373)
T 2mad_H 108 L 108 (373)
T ss_pred c
Confidence 4
No 210
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=22.84 E-value=3.4e+02 Score=22.76 Aligned_cols=63 Identities=8% Similarity=0.072 Sum_probs=33.4
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceee-CCCCCCCCCceeeEEEEe-CCEEEEEecccCCCCCCCCceEEEEECC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVD-RFDMPKDMAHSHLGVVSD-GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~-~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
+++..+.|+.+ ..+.+||..+.+-.. +... ...-.+++.. ++.+++.|+.+ ..+..||..
T Consensus 76 dg~~l~s~s~D------~~v~~wd~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~s~D--------~~i~vwd~~ 137 (319)
T 3frx_A 76 DGAYALSASWD------KTLRLWDVATGETYQRFVGH----KSDVMSVDIDKKASMIISGSRD--------KTIKVWTIK 137 (319)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEEEECC----SSCEEEEEECTTSCEEEEEETT--------SCEEEEETT
T ss_pred CCCEEEEEeCC------CEEEEEECCCCCeeEEEccC----CCcEEEEEEcCCCCEEEEEeCC--------CeEEEEECC
Confidence 45566666643 358889988775322 2111 1112222222 45666777653 346777776
Q ss_pred CCc
Q 020688 206 TRK 208 (322)
Q Consensus 206 t~~ 208 (322)
...
T Consensus 138 ~~~ 140 (319)
T 3frx_A 138 GQC 140 (319)
T ss_dssp SCE
T ss_pred CCe
Confidence 543
No 211
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=22.39 E-value=2.1e+02 Score=24.38 Aligned_cols=97 Identities=7% Similarity=-0.051 Sum_probs=43.8
Q ss_pred hccCCCCCCEEEcCCCCCCcccceEEEE-CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEeC
Q 020688 100 ADLPAPDLEWEQMPSAPVPRLDGAAIQI-KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDG 178 (322)
Q Consensus 100 ~~~~~~~~~W~~~~~~p~~R~~~~~~~~-~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~ 178 (322)
+.+|..+.+.+.+.........+-+..- +..||+.+..+.... .-.+|.+|..+.+.+.+...+.. ...-..++..+
T Consensus 32 ~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~-~v~~~~~~~~~g~~~~~~~~~~~-~~~p~~~~~dg 109 (361)
T 3scy_A 32 FRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQA-AVSAFAFDKEKGTLHLLNTQKTM-GADPCYLTTNG 109 (361)
T ss_dssp EEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTC-EEEEEEEETTTTEEEEEEEEECS-SSCEEEEEECS
T ss_pred EEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCC-cEEEEEEeCCCCcEEEeeEeccC-CCCcEEEEECC
Confidence 4455556666655433111111112222 345766654321111 11245566666777665544321 11222333345
Q ss_pred CEEEEEecccCCCCCCCCceEEEEECCC
Q 020688 179 RYIYIVSGQYGPQCRGPTSRTFVLDSET 206 (322)
Q Consensus 179 ~~iyv~GG~~~~~~~~~~~~~~~yD~~t 206 (322)
+.||+.... ...+.+||..+
T Consensus 110 ~~l~~~~~~--------~~~v~~~~~~~ 129 (361)
T 3scy_A 110 KNIVTANYS--------GGSITVFPIGQ 129 (361)
T ss_dssp SEEEEEETT--------TTEEEEEEBCT
T ss_pred CEEEEEECC--------CCEEEEEEeCC
Confidence 567766421 24577777754
No 212
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=21.91 E-value=3.2e+02 Score=22.16 Aligned_cols=91 Identities=14% Similarity=0.042 Sum_probs=50.3
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCCCCCceeeEEEEe--CCEEEEEecccCCCCCCCCceEEEEECC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSE 205 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yD~~ 205 (322)
++.||+.-.. ...+.+||+.+..-..+.+... ..-+++++. ++.||+.-.. ...+.++|+.
T Consensus 47 ~~~ly~~d~~------~~~I~~~~~~g~~~~~~~~~~~---~~p~~ia~d~~~~~lyv~d~~--------~~~I~~~~~~ 109 (267)
T 1npe_A 47 DKVVYWTDIS------EPSIGRASLHGGEPTTIIRQDL---GSPEGIALDHLGRTIFWTDSQ--------LDRIEVAKMD 109 (267)
T ss_dssp TTEEEEEETT------TTEEEEEESSSCCCEEEECTTC---CCEEEEEEETTTTEEEEEETT--------TTEEEEEETT
T ss_pred CCEEEEEECC------CCEEEEEecCCCCcEEEEECCC---CCccEEEEEecCCeEEEEECC--------CCEEEEEEcC
Confidence 5789987531 2468999987765333322111 122345554 6899998532 3578899987
Q ss_pred CCcEEecCCCCCCCCCCeEEEE--CCEEEEEcc
Q 020688 206 TRKWDSIPPLPSPRYSPATQLW--RGRLHVMGG 236 (322)
Q Consensus 206 t~~W~~~~~~p~~r~~~~~~~~--~~~Lyi~GG 236 (322)
...-..+..... .....+++. +++||+...
T Consensus 110 g~~~~~~~~~~~-~~P~~i~vd~~~g~lyv~~~ 141 (267)
T 1npe_A 110 GTQRRVLFDTGL-VNPRGIVTDPVRGNLYWTDW 141 (267)
T ss_dssp SCSCEEEECSSC-SSEEEEEEETTTTEEEEEEC
T ss_pred CCCEEEEEECCC-CCccEEEEeeCCCEEEEEEC
Confidence 544333321111 111233443 689999863
No 213
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=21.68 E-value=3.7e+02 Score=22.84 Aligned_cols=105 Identities=12% Similarity=-0.004 Sum_probs=54.0
Q ss_pred EEECCEEEEEeecCCCCCccceEEEEECCCCc-------eeeCCCCCCCCCceeeEEEEe-C----C---EEEEEecccC
Q 020688 125 IQIKNLFYVFAGYGSLDYVHSHVDVYNFTDNK-------WVDRFDMPKDMAHSHLGVVSD-G----R---YIYIVSGQYG 189 (322)
Q Consensus 125 ~~~~~~lyv~GG~~~~~~~~~~v~~yd~~t~~-------W~~~~~~~~p~~r~~~~~~~~-~----~---~iyv~GG~~~ 189 (322)
+.....+++.|+.+ ..+.+||..+.+ -..+.... ..-.+++.. + + .+++.|+.+
T Consensus 22 ~~~~~~~l~s~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~~g~~~~~l~s~~~d- 90 (397)
T 1sq9_A 22 VSACNSFTVSCSGD------GYLKVWDNKLLDNENPKDKSYSHFVHK----SGLHHVDVLQAIERDAFELCLVATTSFS- 90 (397)
T ss_dssp EEECSSEEEEEETT------SEEEEEESBCCTTCCGGGGEEEEECCT----TCEEEEEEEEEEETTTEEEEEEEEEETT-
T ss_pred EEecCCeEEEEcCC------CEEEEEECCCcccccCCCcceEEecCC----CcEEEEEEecccccCCccccEEEEEcCC-
Confidence 33444666777653 358888887766 22222111 122223222 3 5 677777653
Q ss_pred CCCCCCCceEEEEECCCCc------EEecCCCCCC--CCCC-eEEEE-----CCEE-EEEccCCCCCCCCCcceeEeE
Q 020688 190 PQCRGPTSRTFVLDSETRK------WDSIPPLPSP--RYSP-ATQLW-----RGRL-HVMGGSKENRHTPGLEHWSIA 252 (322)
Q Consensus 190 ~~~~~~~~~~~~yD~~t~~------W~~~~~~p~~--r~~~-~~~~~-----~~~L-yi~GG~~~~~~~~~~~~~~i~ 252 (322)
..+..||..+.+ +..+...+.. .... ++... ++.. ++.|+.+ ..+..|++.
T Consensus 91 -------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~ 156 (397)
T 1sq9_A 91 -------GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-----GTTYIWKFH 156 (397)
T ss_dssp -------SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-----SCEEEEEEE
T ss_pred -------CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-----CcEEEEeCC
Confidence 357778877665 7776544311 1112 22222 4556 7777753 345667664
No 214
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=21.49 E-value=3.5e+02 Score=22.39 Aligned_cols=90 Identities=8% Similarity=0.063 Sum_probs=45.5
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCc----eeeCCCCCCCCCceeeEEEEe-CCE-EEEEecccCCCCCCCCceEEE
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNK----WVDRFDMPKDMAHSHLGVVSD-GRY-IYIVSGQYGPQCRGPTSRTFV 201 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~----W~~~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~~ 201 (322)
++.+++.|+.+ ..+.+||..+.+ -....... ..-.+++.. ++. +++.|+. ...+..
T Consensus 22 ~~~~l~~~~~d------~~v~iw~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~l~~~~~--------dg~i~~ 83 (342)
T 1yfq_A 22 SKSLLLITSWD------GSLTVYKFDIQAKNVDLLQSLRYK----HPLLCCNFIDNTDLQIYVGTV--------QGEILK 83 (342)
T ss_dssp GGTEEEEEETT------SEEEEEEEETTTTEEEEEEEEECS----SCEEEEEEEESSSEEEEEEET--------TSCEEE
T ss_pred CCCEEEEEcCC------CeEEEEEeCCCCccccceeeeecC----CceEEEEECCCCCcEEEEEcC--------CCeEEE
Confidence 44555666643 347777776655 33222211 122223332 555 5666664 245888
Q ss_pred EEC-CCCcEEecCC--CCCCCCCCeEEEECCEEEEEccC
Q 020688 202 LDS-ETRKWDSIPP--LPSPRYSPATQLWRGRLHVMGGS 237 (322)
Q Consensus 202 yD~-~t~~W~~~~~--~p~~r~~~~~~~~~~~Lyi~GG~ 237 (322)
||. .+.+-..+.. ...+. .++....+.+++.|+.
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v--~~l~~~~~~~l~s~~~ 120 (342)
T 1yfq_A 84 VDLIGSPSFQALTNNEANLGI--CRICKYGDDKLIAASW 120 (342)
T ss_dssp ECSSSSSSEEECBSCCCCSCE--EEEEEETTTEEEEEET
T ss_pred EEeccCCceEeccccCCCCce--EEEEeCCCCEEEEEcC
Confidence 999 8887766543 22111 1222222556666664
No 215
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=21.00 E-value=2e+02 Score=23.80 Aligned_cols=62 Identities=11% Similarity=0.172 Sum_probs=36.8
Q ss_pred CCEEEEEeecCCCCCccceEEEEECCCCceeeCCC------CCCC----CCceeeEEEE--eCCEEEEEecccCCCCCCC
Q 020688 128 KNLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFD------MPKD----MAHSHLGVVS--DGRYIYIVSGQYGPQCRGP 195 (322)
Q Consensus 128 ~~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~------~~~p----~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~ 195 (322)
++++|+|-| +..|+||..+++-..--| +|.. .+..--++.. .++++|.+-|
T Consensus 129 ~~k~yfFkG--------~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg--------- 191 (227)
T 3lp9_A 129 GKEVYLFKG--------DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD--------- 191 (227)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET---------
T ss_pred CCEEEEEEC--------CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC---------
Confidence 589999987 458999987654322101 1100 0112223333 3689999965
Q ss_pred CceEEEEECCCC
Q 020688 196 TSRTFVLDSETR 207 (322)
Q Consensus 196 ~~~~~~yD~~t~ 207 (322)
+..++||..++
T Consensus 192 -~~Ywr~d~~~~ 202 (227)
T 3lp9_A 192 -DHYARVKVTPX 202 (227)
T ss_dssp -TEEEEEECCSS
T ss_pred -CEEEEEECCcc
Confidence 46788998765
No 216
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=20.86 E-value=4.2e+02 Score=23.15 Aligned_cols=90 Identities=13% Similarity=0.118 Sum_probs=51.8
Q ss_pred CEEEEEeecCCCCCccceEEEEECCCCceeeCCCCCC----CC-----CceeeEEEEeC---CEEEEEecccCCCCCCCC
Q 020688 129 NLFYVFAGYGSLDYVHSHVDVYNFTDNKWVDRFDMPK----DM-----AHSHLGVVSDG---RYIYIVSGQYGPQCRGPT 196 (322)
Q Consensus 129 ~~lyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~~~----p~-----~r~~~~~~~~~---~~iyv~GG~~~~~~~~~~ 196 (322)
+.||+..+. ..+++.+-..++|+.+..... |. ....+.+++.. +.||+.. .
T Consensus 190 ~~l~vg~~~-------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~----------~ 252 (394)
T 3b7f_A 190 KHLYIGMSS-------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN----------H 252 (394)
T ss_dssp TCEEEEEET-------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE----------T
T ss_pred CEEEEEECC-------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc----------C
Confidence 568776432 237777777889998753111 10 12344555542 6788743 1
Q ss_pred ceEEEEECCCCcEEecCC-CCCC--CCCCeEEE---ECCEEEEEc
Q 020688 197 SRTFVLDSETRKWDSIPP-LPSP--RYSPATQL---WRGRLHVMG 235 (322)
Q Consensus 197 ~~~~~yD~~t~~W~~~~~-~p~~--r~~~~~~~---~~~~Lyi~G 235 (322)
..+++.+-...+|+.+.. +|.. .....+++ ..+.||+..
T Consensus 253 ~gl~~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 253 CGIYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp TEEEEEETTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEE
T ss_pred CeEEEeCCCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEe
Confidence 347888888889999854 4432 22233333 246788864
No 217
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=20.77 E-value=2.4e+02 Score=23.30 Aligned_cols=51 Identities=20% Similarity=0.366 Sum_probs=29.2
Q ss_pred ceEEEEECCCCceeeCCCCCCCCCceeeEEEEe--CCEEEEEecccCCCCCCCCceEEEEECCCCc
Q 020688 145 SHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSD--GRYIYIVSGQYGPQCRGPTSRTFVLDSETRK 208 (322)
Q Consensus 145 ~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~ 208 (322)
+.+.+||+.+.+-...-+... .-.+++.. +..||+. +. ...+.+||+.+.+
T Consensus 260 ~~v~~~d~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~-~~--------~~~i~v~d~~~~~ 312 (337)
T 1pby_B 260 NVLESFDLEKNASIKRVPLPH----SYYSVNVSTDGSTVWLG-GA--------LGDLAAYDAETLE 312 (337)
T ss_dssp SEEEEEETTTTEEEEEEECSS----CCCEEEECTTSCEEEEE-SB--------SSEEEEEETTTCC
T ss_pred CeEEEEECCCCcCcceecCCC----ceeeEEECCCCCEEEEE-cC--------CCcEEEEECcCCc
Confidence 468999998776433222221 12233433 4457764 32 3568999998765
No 218
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=20.43 E-value=3.3e+02 Score=26.15 Aligned_cols=84 Identities=15% Similarity=0.127 Sum_probs=44.6
Q ss_pred cceEEEEECCCCceeeCCCCCCCCCceeeEEEEeCCEEEEEecccCCCCCCCCceEEEEECCCCc---EEecCCCCCCCC
Q 020688 144 HSHVDVYNFTDNKWVDRFDMPKDMAHSHLGVVSDGRYIYIVSGQYGPQCRGPTSRTFVLDSETRK---WDSIPPLPSPRY 220 (322)
Q Consensus 144 ~~~v~~yd~~t~~W~~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yD~~t~~---W~~~~~~p~~r~ 220 (322)
.+.++.+|..+.+++.+..-.. .. ...+..++.+|+....+. . ...+..+|..+.. |+.+-+-.....
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~~--~~--~~~~~~~g~l~~~s~~~~-~----~~~l~~~d~~~~~~~~~~~l~~~~~~~~ 321 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGVG--AK--YEVHAWKDRFYVLTDEGA-P----RQRVFEVDPAKPARASWKEIVPEDSSAS 321 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECSS--CC--EEEEEETTEEEEEECTTC-T----TCEEEEEBTTBCSGGGCEEEECCCSSCE
T ss_pred ceEEEEEcCCCCceEEeecCCC--ce--EEEEecCCcEEEEECCCC-C----CCEEEEEeCCCCCccCCeEEecCCCCCe
Confidence 3568888877777877654332 11 122224555666643321 1 3578999987754 887743211111
Q ss_pred CCeEEEECCEEEEEcc
Q 020688 221 SPATQLWRGRLHVMGG 236 (322)
Q Consensus 221 ~~~~~~~~~~Lyi~GG 236 (322)
-......+++|++...
T Consensus 322 l~~~~~~~~~lv~~~~ 337 (695)
T 2bkl_A 322 LLSVSIVGGHLSLEYL 337 (695)
T ss_dssp EEEEEEETTEEEEEEE
T ss_pred EEEEEEECCEEEEEEE
Confidence 1122334677766654
Done!