BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>020689
MSLISLASSQSVLFSSTNPAHNFSSLSHRSSRNGNWVSGRNRLHAKSADPDAGTSQVGDA
SSESKSGSASTSFLSVLCPLLKLFSGGDPSRERNDTLEVATSSLSTLARLPWGSRSLSEG
SDTQEISNSDSPTRLQLFEFEACPFCRRVREAITELDLSVELSGCMNRFPFLIDPNTGVS
MYESGDIVNYLFQQYGKGRSPSTGLLESTLITGWMPTIFRAGRGMTLWEKARPDPPSKKL
ELFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQ
IGDYKKILSYLFQSYSASPSPV

High Scoring Gene Products

Symbol, full name Information P value
AT4G10000 protein from Arabidopsis thaliana 4.7e-96
AT5G03880 protein from Arabidopsis thaliana 9.5e-34

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  020689
        (322 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2140533 - symbol:AT4G10000 species:3702 "Arabi...   955  4.7e-96   1
TAIR|locus:2150655 - symbol:AT5G03880 species:3702 "Arabi...   367  9.5e-34   1


>TAIR|locus:2140533 [details] [associations]
            symbol:AT4G10000 species:3702 "Arabidopsis thaliana"
            [GO:0009055 "electron carrier activity" evidence=IEA] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0015035 "protein disulfide
            oxidoreductase activity" evidence=IEA] [GO:0045454 "cell redox
            homeostasis" evidence=IEA] InterPro:IPR002109 InterPro:IPR004045
            PROSITE:PS50404 PROSITE:PS51354 GO:GO:0009507 EMBL:CP002687
            GO:GO:0009055 Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833
            GO:GO:0045454 GO:GO:0015035 KO:K03354 IPI:IPI00524869
            RefSeq:NP_567349.1 RefSeq:NP_849353.1 UniGene:At.33658
            ProteinModelPortal:F4JKW0 SMR:F4JKW0 PRIDE:F4JKW0
            EnsemblPlants:AT4G10000.1 EnsemblPlants:AT4G10000.2 GeneID:826591
            KEGG:ath:AT4G10000 OMA:FTGWMPT Uniprot:F4JKW0
        Length = 333

 Score = 955 (341.2 bits), Expect = 4.7e-96, P = 4.7e-96
 Identities = 190/309 (61%), Positives = 231/309 (74%)

Query:    27 SHRSSRNGNWVSGRNRLHAKSADPDAGTSQVGDAXXXXXXXXXXXXFLSVLCPLLKLFSG 86
             S R S NGNWV  R RL+ KS++ +    +                FLS LCPLLK+FSG
Sbjct:    28 SKRISGNGNWVRERRRLYVKSSNSEGKKEEAAQKSSSNNTSS----FLSFLCPLLKVFSG 83

Query:    87 GDPSRERNDTLEVATSSLSTLARLPWGSRSLSEGS-DTQEISNSDSPTRLQLFEFEACPF 145
             GDPS++RN  LEVATSSL+++ARLPWGSR +S GS D Q++S S+ P RLQLFEFEACPF
Sbjct:    84 GDPSQQRNHALEVATSSLASVARLPWGSR-VSTGSIDNQDVS-SNPPLRLQLFEFEACPF 141

Query:   146 CRRVREAITELDLSVEL----------------SGCMNRFPFLIDPNTGVSMYESGDIVN 189
             CRRVREA+TELDLSVE+                SG    FPFL+DPNT   MYESGDIV 
Sbjct:   142 CRRVREAMTELDLSVEVYPCPKGSIRHRELVRRSGGKEMFPFLVDPNTETLMYESGDIVK 201

Query:   190 YLFQQYGKGRSPSTGLLESTLITGWMPTIFRAGRGMTLWEKARPDPPSKKLELFSYENNP 249
             YLF+QYG GR PSTGLLESTL TGWMPT+ RAGRGM+LW+KA  D P K LELFSYENNP
Sbjct:   202 YLFKQYGNGRGPSTGLLESTLFTGWMPTLLRAGRGMSLWDKASTDLPPKMLELFSYENNP 261

Query:   250 YARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNTSTQIGDYKKILS 309
             Y+R+VREALCELELPY+L N+G+GS+R K L++ +GS +VP+L+DPNT  Q+GDY+KIL+
Sbjct:   262 YSRLVREALCELELPYVLHNIGEGSTRMKSLLNASGSNKVPFLVDPNTGVQLGDYEKILA 321

Query:   310 YLFQSYSAS 318
             YLF++YS++
Sbjct:   322 YLFKTYSSA 330

 Score = 154 (59.3 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 35/87 (40%), Positives = 51/87 (58%)

Query:   236 PSKKLELFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEV-PYLID 294
             P  +L+LF +E  P+ R VREA+ EL+L   +     GS R + LV  +G KE+ P+L+D
Sbjct:   127 PPLRLQLFEFEACPFCRRVREAMTELDLSVEVYPCPKGSIRHRELVRRSGGKEMFPFLVD 186

Query:   295 PNTSTQIGDYKKILSYLFQSYSASPSP 321
             PNT T + +   I+ YLF+ Y     P
Sbjct:   187 PNTETLMYESGDIVKYLFKQYGNGRGP 213


>TAIR|locus:2150655 [details] [associations]
            symbol:AT5G03880 species:3702 "Arabidopsis thaliana"
            [GO:0009055 "electron carrier activity" evidence=IEA] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0045454 "cell redox
            homeostasis" evidence=IEA] [GO:0009535 "chloroplast thylakoid
            membrane" evidence=IDA] [GO:0009534 "chloroplast thylakoid"
            evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
            [GO:0019684 "photosynthesis, light reaction" evidence=RCA]
            [GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
            InterPro:IPR004045 InterPro:IPR011767 PROSITE:PS00195
            PROSITE:PS50404 EMBL:CP002688 GO:GO:0009055 GO:GO:0009941
            Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0045454
            GO:GO:0009535 EMBL:AY054607 EMBL:AY081486 IPI:IPI00541069
            RefSeq:NP_568128.1 UniGene:At.4886 ProteinModelPortal:Q940I2
            SMR:Q940I2 STRING:Q940I2 PRIDE:Q940I2 EnsemblPlants:AT5G03880.1
            GeneID:831679 KEGG:ath:AT5G03880 TAIR:At5g03880 InParanoid:Q940I2
            OMA:KQQFPYM PhylomeDB:Q940I2 ProtClustDB:CLSN2689384
            Genevestigator:Q940I2 Uniprot:Q940I2
        Length = 339

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 83/200 (41%), Positives = 121/200 (60%)

Query:   135 LQLFEFEACPFCRRVREAITELDLS----------------VELSGCMNRFPFLIDPNTG 178
             ++++EFE CPFCR+VRE +  LDL                 V+  G   +FP+++DPNTG
Sbjct:   143 IEIYEFEGCPFCRKVREMVAVLDLDILYYPCPRGSPNFRPKVKQMGGKQQFPYMVDPNTG 202

Query:   179 VSMYESGDIVNYLFQQYGKGRSP-STGLLESTLITGWMPTIFRAGRGMTLWEKARPDPPS 237
             VSMYES  I+ YL ++YG G  P S  L   T IT     I R G+G  L+  A+  PP 
Sbjct:   203 VSMYESDGIIKYLSEKYGDGTVPLSLSLGALTAITAGFAMIGRMGKG-NLYTPAKL-PP- 259

Query:   238 KKLELFSYENNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKEVPYLIDPNT 297
             K LE ++YE +P+ ++VRE L ELELP+I ++   GS + ++L++  G  +VPYL DPNT
Sbjct:   260 KPLEFWAYEGSPFCKLVREVLVELELPHIQRSCARGSPKRQVLLEKAGHFQVPYLEDPNT 319

Query:   298 STQIGDYKKILSYLFQSYSA 317
                + +  +I+ YL Q+Y+A
Sbjct:   320 GVAMFESAEIVEYLKQTYAA 339

 Score = 141 (54.7 bits), Expect = 3.9e-07, P = 3.9e-07
 Identities = 42/137 (30%), Positives = 66/137 (48%)

Query:   191 LFQQYGKGRSPSTGLLESTLITGWMPT---IFRAGRGMTLWEKARPDP-PSKKLELFSYE 246
             LF ++G G   S G   S +    +P      R G G+T+ E A+  P P K +E++ +E
Sbjct:    92 LFFRFGTGVFVS-GYSASFVSKEEIPADQYALRLG-GITVKETAKVGPRPEKPIEIYEFE 149

Query:   247 NNPYARIVREALCELELPYILQNVGDGSSRTKLLVDITGSKE-VPYLIDPNTSTQIGDYK 305
               P+ R VRE +  L+L  +      GS   +  V   G K+  PY++DPNT   + +  
Sbjct:   150 GCPFCRKVREMVAVLDLDILYYPCPRGSPNFRPKVKQMGGKQQFPYMVDPNTGVSMYESD 209

Query:   306 KILSYLFQSYSASPSPV 322
              I+ YL + Y     P+
Sbjct:   210 GIIKYLSEKYGDGTVPL 226

 Score = 124 (48.7 bits), Expect = 3.5e-05, P = 3.5e-05
 Identities = 33/79 (41%), Positives = 45/79 (56%)

Query:   132 PTRLQLFEFEACPFCRRVREAITELDLS-VELS---GCMNR---------F--PFLIDPN 176
             P  L+ + +E  PFC+ VRE + EL+L  ++ S   G   R         F  P+L DPN
Sbjct:   259 PKPLEFWAYEGSPFCKLVREVLVELELPHIQRSCARGSPKRQVLLEKAGHFQVPYLEDPN 318

Query:   177 TGVSMYESGDIVNYLFQQY 195
             TGV+M+ES +IV YL Q Y
Sbjct:   319 TGVAMFESAEIVEYLKQTY 337


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.133   0.393    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      322       298   0.00094  115 3  11 22  0.43    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  204 KB (2114 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.73u 0.11s 23.84t   Elapsed:  00:00:01
  Total cpu time:  23.73u 0.11s 23.84t   Elapsed:  00:00:01
  Start:  Fri May 10 04:13:21 2013   End:  Fri May 10 04:13:22 2013

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