Query 020692
Match_columns 322
No_of_seqs 238 out of 2330
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 04:23:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020692.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020692hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0462 PrsA Phosphoribosylpyr 100.0 1.2E-80 2.6E-85 579.9 30.8 289 14-321 2-301 (314)
2 PLN02297 ribose-phosphate pyro 100.0 6.1E-76 1.3E-80 557.5 33.6 310 11-322 11-326 (326)
3 PRK04923 ribose-phosphate pyro 100.0 2.6E-74 5.7E-79 547.2 32.1 293 11-321 1-305 (319)
4 PTZ00145 phosphoribosylpyropho 100.0 1.6E-73 3.5E-78 555.5 31.1 288 15-321 118-423 (439)
5 PRK02269 ribose-phosphate pyro 100.0 2.6E-73 5.7E-78 541.5 30.9 288 15-321 4-304 (320)
6 PRK00553 ribose-phosphate pyro 100.0 8E-73 1.7E-77 539.7 31.4 290 13-321 6-309 (332)
7 PRK02458 ribose-phosphate pyro 100.0 1E-72 2.2E-77 537.5 31.1 290 12-321 5-304 (323)
8 PRK07199 phosphoribosylpyropho 100.0 1.3E-70 2.8E-75 519.0 30.7 277 16-321 2-291 (301)
9 PRK02812 ribose-phosphate pyro 100.0 3.3E-70 7.1E-75 521.1 31.1 290 12-321 17-317 (330)
10 PRK03092 ribose-phosphate pyro 100.0 8.4E-70 1.8E-74 514.1 29.0 275 28-321 1-288 (304)
11 PRK01259 ribose-phosphate pyro 100.0 5.7E-69 1.2E-73 509.7 30.5 286 17-321 1-296 (309)
12 KOG1448 Ribose-phosphate pyrop 100.0 1.3E-69 2.8E-74 495.8 23.1 288 15-321 2-301 (316)
13 PRK00934 ribose-phosphate pyro 100.0 7.3E-68 1.6E-72 497.5 30.4 275 18-321 1-284 (285)
14 PRK06827 phosphoribosylpyropho 100.0 1.7E-67 3.6E-72 509.3 32.5 293 13-321 5-355 (382)
15 PLN02369 ribose-phosphate pyro 100.0 3.2E-66 6.9E-71 489.3 29.3 276 27-321 2-289 (302)
16 TIGR01251 ribP_PPkin ribose-ph 100.0 2.4E-65 5.2E-70 485.4 31.5 283 17-321 1-295 (308)
17 KOG1503 Phosphoribosylpyrophos 100.0 5.6E-57 1.2E-61 401.1 24.7 290 13-321 5-335 (354)
18 PF13793 Pribosyltran_N: N-ter 100.0 4.2E-36 9.1E-41 246.3 12.9 112 17-132 1-114 (116)
19 PF14572 Pribosyl_synth: Phosp 100.0 5.9E-32 1.3E-36 236.0 12.2 132 182-321 2-171 (184)
20 PRK13811 orotate phosphoribosy 99.6 6.6E-15 1.4E-19 128.7 13.1 146 124-277 3-155 (170)
21 PRK11595 DNA utilization prote 99.5 5.4E-15 1.2E-19 134.9 6.0 159 87-262 50-224 (227)
22 PRK08525 amidophosphoribosyltr 99.5 4.6E-14 1E-18 140.5 12.2 139 171-317 263-425 (445)
23 PLN02293 adenine phosphoribosy 99.4 1.5E-12 3.2E-17 115.5 13.1 106 169-277 51-177 (187)
24 COG1040 ComFC Predicted amidop 99.4 3.2E-13 7E-18 123.1 8.8 148 95-262 64-221 (225)
25 TIGR01203 HGPRTase hypoxanthin 99.4 2.2E-12 4.8E-17 112.3 10.7 96 168-263 11-122 (166)
26 TIGR00201 comF comF family pro 99.4 3.2E-12 6.9E-17 113.6 11.0 144 100-261 36-188 (190)
27 PRK09162 hypoxanthine-guanine 99.4 4E-12 8.7E-17 112.2 10.5 95 168-262 25-134 (181)
28 COG0634 Hpt Hypoxanthine-guani 99.3 8.9E-12 1.9E-16 107.8 9.9 98 168-268 20-133 (178)
29 PRK13812 orotate phosphoribosy 99.3 1.7E-11 3.6E-16 107.8 10.0 108 168-277 44-158 (176)
30 PRK15423 hypoxanthine phosphor 99.3 1.9E-11 4.2E-16 107.6 9.8 94 168-261 17-128 (178)
31 PF00156 Pribosyltran: Phospho 99.3 1.9E-11 4.1E-16 100.2 9.1 94 168-262 13-125 (125)
32 PRK12560 adenine phosphoribosy 99.2 6.4E-11 1.4E-15 105.1 11.7 122 170-296 38-181 (187)
33 PRK05793 amidophosphoribosyltr 99.2 6.4E-11 1.4E-15 118.8 12.0 139 171-317 276-438 (469)
34 PRK02304 adenine phosphoribosy 99.2 9.9E-11 2.1E-15 102.7 11.6 91 183-274 51-163 (175)
35 PRK02277 orotate phosphoribosy 99.2 7.1E-11 1.5E-15 105.9 10.8 102 169-274 72-186 (200)
36 PRK13809 orotate phosphoribosy 99.2 9.1E-11 2E-15 105.6 11.4 117 169-292 52-179 (206)
37 PLN02238 hypoxanthine phosphor 99.2 7.2E-11 1.6E-15 105.0 10.1 99 168-269 20-138 (189)
38 TIGR01090 apt adenine phosphor 99.2 1.8E-10 4E-15 100.4 11.1 105 168-275 34-159 (169)
39 PRK00129 upp uracil phosphorib 99.2 1.4E-10 2.9E-15 104.7 10.5 106 183-297 70-187 (209)
40 PRK05205 bifunctional pyrimidi 99.2 2.1E-10 4.5E-15 100.7 10.3 95 168-262 15-133 (176)
41 TIGR01367 pyrE_Therm orotate p 99.1 3.8E-10 8.2E-15 100.2 11.0 94 168-263 44-143 (187)
42 TIGR00336 pyrE orotate phospho 99.1 7.2E-10 1.6E-14 97.1 11.6 106 169-276 42-159 (173)
43 PRK07322 adenine phosphoribosy 99.1 3.8E-10 8.3E-15 99.3 9.1 93 169-261 38-156 (178)
44 PRK00455 pyrE orotate phosphor 99.1 1.1E-09 2.5E-14 98.1 12.2 107 169-277 51-164 (202)
45 PTZ00149 hypoxanthine phosphor 99.1 4.8E-10 1E-14 102.9 9.0 94 168-261 66-186 (241)
46 PTZ00271 hypoxanthine-guanine 99.1 7.7E-10 1.7E-14 99.8 9.9 98 168-268 36-158 (211)
47 TIGR01744 XPRTase xanthine pho 99.0 2.4E-09 5.2E-14 95.4 11.5 122 169-295 35-182 (191)
48 PRK09219 xanthine phosphoribos 99.0 2.7E-09 5.8E-14 94.9 11.5 119 170-296 40-183 (189)
49 COG0856 Orotate phosphoribosyl 99.0 9.5E-10 2.1E-14 94.8 6.7 92 169-260 72-176 (203)
50 PRK13810 orotate phosphoribosy 99.0 4.9E-09 1.1E-13 93.0 11.0 104 170-277 63-173 (187)
51 TIGR01091 upp uracil phosphori 99.0 2.9E-09 6.3E-14 95.9 9.4 93 183-277 68-172 (207)
52 COG0461 PyrE Orotate phosphori 98.9 2.1E-08 4.5E-13 89.6 11.2 96 182-278 60-164 (201)
53 PRK07272 amidophosphoribosyltr 98.8 1.2E-08 2.7E-13 102.5 10.1 142 169-317 271-435 (484)
54 PRK06031 phosphoribosyltransfe 98.8 3.6E-08 7.9E-13 90.3 12.0 121 171-296 71-220 (233)
55 PRK08558 adenine phosphoribosy 98.8 3.2E-08 7E-13 91.0 11.0 106 169-275 96-225 (238)
56 PRK09123 amidophosphoribosyltr 98.8 2.9E-08 6.3E-13 99.8 11.4 109 169-277 281-420 (479)
57 COG1926 Predicted phosphoribos 98.8 5.6E-08 1.2E-12 86.5 11.6 116 168-293 10-182 (220)
58 KOG1712 Adenine phosphoribosyl 98.8 2E-08 4.3E-13 85.6 8.0 109 168-276 44-173 (183)
59 PRK05500 bifunctional orotidin 98.8 5.3E-08 1.1E-12 97.6 11.6 94 183-277 344-444 (477)
60 PRK09246 amidophosphoribosyltr 98.7 9.8E-08 2.1E-12 96.7 12.3 44 220-263 353-396 (501)
61 TIGR01743 purR_Bsub pur operon 98.7 8.7E-08 1.9E-12 89.4 11.0 114 170-296 118-255 (268)
62 PLN02440 amidophosphoribosyltr 98.7 8.8E-08 1.9E-12 96.5 11.2 93 170-262 262-377 (479)
63 COG2236 Predicted phosphoribos 98.7 2.6E-08 5.5E-13 88.5 6.1 90 168-258 15-120 (192)
64 PRK09213 pur operon repressor; 98.7 1.2E-07 2.5E-12 88.7 10.6 115 170-297 120-258 (271)
65 TIGR01134 purF amidophosphorib 98.7 9.5E-08 2.1E-12 95.4 9.6 133 100-261 235-374 (442)
66 PRK09177 xanthine-guanine phos 98.6 1E-07 2.2E-12 82.2 7.8 81 168-250 18-109 (156)
67 COG0503 Apt Adenine/guanine ph 98.6 2.4E-07 5.2E-12 81.7 9.8 104 169-275 42-166 (179)
68 PRK07631 amidophosphoribosyltr 98.6 4.4E-07 9.5E-12 91.2 11.8 133 100-263 245-386 (475)
69 PRK06388 amidophosphoribosyltr 98.5 2.5E-07 5.5E-12 92.9 8.2 134 101-263 254-394 (474)
70 PRK08341 amidophosphoribosyltr 98.5 4.4E-07 9.6E-12 90.5 9.5 93 170-263 258-372 (442)
71 PRK07349 amidophosphoribosyltr 98.5 5.6E-07 1.2E-11 90.9 9.8 92 169-260 298-412 (500)
72 PRK06781 amidophosphoribosyltr 98.4 9.2E-07 2E-11 88.9 9.5 94 170-263 270-386 (471)
73 KOG3367 Hypoxanthine-guanine p 98.4 9.1E-07 2E-11 76.3 6.9 100 167-269 44-166 (216)
74 TIGR01251 ribP_PPkin ribose-ph 98.3 1.7E-05 3.7E-10 75.8 15.4 138 14-179 159-297 (308)
75 PRK07847 amidophosphoribosyltr 98.3 8.8E-07 1.9E-11 89.7 6.9 135 100-263 264-405 (510)
76 COG2065 PyrR Pyrimidine operon 98.2 7.9E-06 1.7E-10 70.2 8.2 93 169-261 16-133 (179)
77 COG0035 Upp Uracil phosphoribo 98.1 1.9E-05 4.2E-10 70.8 8.6 91 185-277 72-175 (210)
78 PF14681 UPRTase: Uracil phosp 97.9 3.4E-05 7.4E-10 69.6 8.3 92 184-277 68-173 (207)
79 PLN02541 uracil phosphoribosyl 97.9 4.4E-05 9.6E-10 70.5 8.5 91 185-277 104-209 (244)
80 COG0034 PurF Glutamine phospho 97.3 0.00051 1.1E-08 67.9 6.3 43 219-261 342-384 (470)
81 PRK07199 phosphoribosylpyropho 97.1 0.025 5.4E-07 53.9 15.5 134 14-179 160-293 (301)
82 PRK04923 ribose-phosphate pyro 96.8 0.069 1.5E-06 51.4 15.8 139 14-179 166-307 (319)
83 PRK00934 ribose-phosphate pyro 96.7 0.058 1.3E-06 51.0 14.8 129 15-177 155-284 (285)
84 PRK03092 ribose-phosphate pyro 96.6 0.13 2.7E-06 49.2 16.2 141 13-179 147-290 (304)
85 KOG0572 Glutamine phosphoribos 96.4 0.0084 1.8E-07 58.2 6.6 43 218-260 349-391 (474)
86 PRK15423 hypoxanthine phosphor 96.3 0.088 1.9E-06 46.4 12.0 95 14-111 34-136 (178)
87 PRK02458 ribose-phosphate pyro 96.1 0.19 4.2E-06 48.4 14.8 138 14-179 169-306 (323)
88 PRK02269 ribose-phosphate pyro 95.8 0.41 8.8E-06 46.1 15.2 141 14-179 165-306 (320)
89 PRK01259 ribose-phosphate pyro 95.5 0.56 1.2E-05 44.9 15.1 141 14-179 158-298 (309)
90 PLN02369 ribose-phosphate pyro 95.3 0.84 1.8E-05 43.6 15.5 139 16-179 152-291 (302)
91 PRK09162 hypoxanthine-guanine 95.2 0.32 6.9E-06 42.8 11.3 90 13-105 39-134 (181)
92 PRK02812 ribose-phosphate pyro 95.1 1.2 2.5E-05 43.2 15.7 138 16-179 180-319 (330)
93 PTZ00145 phosphoribosylpyropho 95.0 0.31 6.7E-06 48.8 11.6 130 183-320 118-273 (439)
94 PF15609 PRTase_2: Phosphoribo 94.8 0.05 1.1E-06 48.3 5.1 38 224-261 120-157 (191)
95 TIGR01203 HGPRTase hypoxanthin 94.4 0.79 1.7E-05 39.7 11.7 92 10-105 22-121 (166)
96 PRK00553 ribose-phosphate pyro 94.4 0.77 1.7E-05 44.5 12.6 128 184-320 9-161 (332)
97 COG0462 PrsA Phosphoribosylpyr 94.3 0.47 1E-05 45.4 10.7 136 16-180 164-304 (314)
98 PF13793 Pribosyltran_N: N-ter 93.5 0.73 1.6E-05 37.7 9.1 75 190-266 5-90 (116)
99 COG0634 Hpt Hypoxanthine-guani 93.2 1.4 2.9E-05 38.8 10.7 97 5-104 26-129 (178)
100 PLN02238 hypoxanthine phosphor 92.7 2.4 5.2E-05 37.6 11.9 94 9-105 30-134 (189)
101 KOG1017 Predicted uracil phosp 92.4 0.42 9E-06 42.8 6.5 72 219-299 183-257 (267)
102 PRK06827 phosphoribosylpyropho 91.9 1.5 3.2E-05 43.3 10.4 142 15-179 208-357 (382)
103 PLN02297 ribose-phosphate pyro 91.0 4.4 9.5E-05 39.2 12.5 127 186-321 17-177 (326)
104 PTZ00271 hypoxanthine-guanine 90.8 4.2 9.1E-05 36.8 11.5 93 16-110 59-161 (211)
105 PRK00129 upp uracil phosphorib 89.6 4.7 0.0001 36.2 10.8 86 16-104 72-160 (209)
106 PTZ00149 hypoxanthine phosphor 88.4 6.4 0.00014 36.4 10.9 97 6-104 73-186 (241)
107 PLN02440 amidophosphoribosyltr 85.2 14 0.00031 37.5 12.4 126 14-150 275-422 (479)
108 PRK09123 amidophosphoribosyltr 84.8 15 0.00032 37.5 12.3 124 14-148 295-440 (479)
109 TIGR01090 apt adenine phosphor 84.1 12 0.00025 32.4 9.8 83 16-102 48-143 (169)
110 PRK05205 bifunctional pyrimidi 84.1 16 0.00035 31.7 10.8 88 15-104 32-132 (176)
111 PRK07272 amidophosphoribosyltr 84.0 6.6 0.00014 40.0 9.3 124 16-150 287-432 (484)
112 PRK02304 adenine phosphoribosy 82.6 15 0.00032 31.8 10.0 81 16-99 53-145 (175)
113 TIGR01091 upp uracil phosphori 82.5 19 0.00041 32.3 10.8 85 17-104 70-158 (207)
114 PF15610 PRTase_3: PRTase ComF 82.3 1.7 3.8E-05 40.7 4.1 40 221-260 134-173 (274)
115 PF00156 Pribosyltran: Phospho 79.8 28 0.00062 27.5 10.3 79 22-104 35-124 (125)
116 PRK08341 amidophosphoribosyltr 78.0 16 0.00034 36.9 9.6 86 15-103 272-369 (442)
117 PRK02277 orotate phosphoribosy 77.8 17 0.00038 32.3 9.0 84 16-103 87-175 (200)
118 PRK13811 orotate phosphoribosy 77.6 24 0.00051 30.6 9.5 76 24-107 66-142 (170)
119 PRK08525 amidophosphoribosyltr 77.1 22 0.00048 35.8 10.4 93 15-110 276-382 (445)
120 PRK05793 amidophosphoribosyltr 75.8 20 0.00043 36.4 9.7 90 16-108 290-393 (469)
121 PF14572 Pribosyl_synth: Phosp 73.7 19 0.00041 32.0 7.9 94 60-179 77-173 (184)
122 PRK13812 orotate phosphoribosy 71.6 37 0.0008 29.7 9.3 76 16-98 60-137 (176)
123 TIGR01367 pyrE_Therm orotate p 71.0 67 0.0015 28.3 10.9 80 14-101 58-138 (187)
124 PRK00455 pyrE orotate phosphor 70.7 48 0.001 29.4 10.0 81 15-101 65-146 (202)
125 TIGR01134 purF amidophosphorib 68.0 69 0.0015 32.2 11.5 79 23-104 282-374 (442)
126 PLN02293 adenine phosphoribosy 67.3 74 0.0016 28.1 10.3 81 16-101 64-158 (187)
127 PLN02501 digalactosyldiacylgly 58.3 76 0.0016 34.2 9.9 102 22-132 284-396 (794)
128 PRK12560 adenine phosphoribosy 58.0 1.1E+02 0.0023 27.0 9.6 73 23-99 60-145 (187)
129 TIGR00336 pyrE orotate phospho 55.7 1E+02 0.0022 26.6 9.0 76 23-105 63-144 (173)
130 PF01488 Shikimate_DH: Shikima 54.2 31 0.00066 28.5 5.3 37 220-260 7-43 (135)
131 COG2185 Sbm Methylmalonyl-CoA 51.4 31 0.00068 29.3 4.8 43 241-291 80-122 (143)
132 PRK09246 amidophosphoribosyltr 51.3 80 0.0017 32.4 8.7 82 19-103 297-393 (501)
133 PF01380 SIS: SIS domain SIS d 50.6 20 0.00044 28.5 3.6 81 12-98 3-83 (131)
134 TIGR00640 acid_CoA_mut_C methy 48.4 37 0.00079 28.3 4.8 49 237-293 66-114 (132)
135 smart00450 RHOD Rhodanese Homo 48.0 38 0.00082 24.9 4.5 34 223-259 54-87 (100)
136 cd01080 NAD_bind_m-THF_DH_Cycl 47.8 1.5E+02 0.0034 25.6 8.8 76 221-313 40-116 (168)
137 PRK07349 amidophosphoribosyltr 47.6 1.3E+02 0.0028 31.0 9.4 77 24-103 322-412 (500)
138 cd01444 GlpE_ST GlpE sulfurtra 46.3 35 0.00075 25.6 4.1 32 224-258 55-86 (96)
139 cd00158 RHOD Rhodanese Homolog 45.9 43 0.00093 24.2 4.5 34 223-259 48-81 (89)
140 KOG0814 Glyoxylase [General fu 45.8 18 0.0004 32.0 2.6 44 217-263 23-66 (237)
141 COG0856 Orotate phosphoribosyl 45.7 89 0.0019 27.7 6.8 71 24-99 96-172 (203)
142 cd01529 4RHOD_Repeats Member o 44.9 43 0.00094 25.3 4.5 33 224-259 55-87 (96)
143 KOG1448 Ribose-phosphate pyrop 44.0 62 0.0014 30.9 6.0 91 15-110 163-256 (316)
144 PRK11595 DNA utilization prote 43.8 90 0.002 28.2 7.0 72 27-102 136-221 (227)
145 PRK13809 orotate phosphoribosy 42.4 1.5E+02 0.0032 26.6 8.1 68 25-97 78-147 (206)
146 PRK07322 adenine phosphoribosy 42.0 2.3E+02 0.005 24.5 10.8 93 15-111 53-162 (178)
147 PRK06781 amidophosphoribosyltr 41.1 1.5E+02 0.0032 30.2 8.8 87 15-104 284-384 (471)
148 PF10662 PduV-EutP: Ethanolami 40.9 50 0.0011 28.1 4.5 41 233-276 100-140 (143)
149 PF02875 Mur_ligase_C: Mur lig 39.3 1.5E+02 0.0032 22.3 6.7 34 227-260 13-47 (91)
150 cd01523 RHOD_Lact_B Member of 38.1 55 0.0012 24.9 4.1 28 224-254 60-87 (100)
151 COG2236 Predicted phosphoribos 38.0 2.2E+02 0.0048 25.4 8.4 72 13-84 28-105 (192)
152 cd05008 SIS_GlmS_GlmD_1 SIS (S 37.9 1.4E+02 0.003 23.6 6.6 81 17-105 2-82 (126)
153 PRK07631 amidophosphoribosyltr 36.6 2.2E+02 0.0049 29.0 9.2 78 24-104 293-384 (475)
154 COG1751 Uncharacterized conser 35.4 57 0.0012 28.3 4.0 75 236-321 36-118 (186)
155 PRK06388 amidophosphoribosyltr 34.8 2.6E+02 0.0057 28.5 9.4 77 25-104 302-392 (474)
156 PRK07847 amidophosphoribosyltr 34.8 2.6E+02 0.0057 28.8 9.4 78 24-104 312-403 (510)
157 cd01518 RHOD_YceA Member of th 34.7 76 0.0016 24.2 4.4 32 224-258 60-91 (101)
158 COG0287 TyrA Prephenate dehydr 34.4 37 0.00079 32.1 3.0 52 237-297 97-148 (279)
159 cd05014 SIS_Kpsf KpsF-like pro 33.4 2.3E+02 0.005 22.3 7.3 79 17-103 3-81 (128)
160 cd01532 4RHOD_Repeat_1 Member 32.2 76 0.0016 23.9 4.0 32 224-258 49-82 (92)
161 cd01519 RHOD_HSP67B2 Member of 31.7 81 0.0018 24.0 4.2 33 224-259 65-97 (106)
162 cd01528 RHOD_2 Member of the R 31.5 92 0.002 23.7 4.4 33 224-259 57-89 (101)
163 PF14681 UPRTase: Uracil phosp 29.3 4.1E+02 0.0088 23.6 9.3 84 16-102 68-157 (207)
164 cd01527 RHOD_YgaP Member of th 28.8 90 0.002 23.6 3.9 32 224-258 53-84 (99)
165 cd05009 SIS_GlmS_GlmD_2 SIS (S 28.4 2.2E+02 0.0048 23.0 6.5 86 13-104 12-97 (153)
166 TIGR01809 Shik-DH-AROM shikima 28.3 1.1E+02 0.0024 28.6 5.1 35 222-260 122-156 (282)
167 cd04820 PA_M28_1_1 PA_M28_1_1: 27.4 1.3E+02 0.0028 25.3 4.8 57 220-276 45-109 (137)
168 PF02702 KdpD: Osmosensitive K 27.3 1E+02 0.0022 28.0 4.4 121 182-315 33-166 (211)
169 PF04015 DUF362: Domain of unk 26.7 1.8E+02 0.004 25.4 6.1 83 234-319 18-104 (206)
170 COG0784 CheY FOG: CheY-like re 26.7 1.9E+02 0.0042 22.2 5.7 45 223-276 3-49 (130)
171 cd01524 RHOD_Pyr_redox Member 26.6 1.3E+02 0.0028 22.4 4.4 31 225-259 51-81 (90)
172 PRK13810 orotate phosphoribosy 26.4 4.1E+02 0.0089 23.4 8.1 76 25-107 84-160 (187)
173 cd04814 PA_M28_1 PA_M28_1: Pro 26.1 1.5E+02 0.0033 25.1 5.1 41 221-261 44-98 (142)
174 PLN02962 hydroxyacylglutathion 26.1 97 0.0021 28.7 4.2 50 223-275 33-83 (251)
175 PRK10997 yieM hypothetical pro 26.0 2.8E+02 0.006 28.5 7.8 60 222-293 414-475 (487)
176 PRK08105 flavodoxin; Provision 25.3 2.4E+02 0.0052 23.6 6.2 64 16-86 3-73 (149)
177 PLN02160 thiosulfate sulfurtra 25.3 1.2E+02 0.0025 25.1 4.2 44 224-277 80-123 (136)
178 cd05013 SIS_RpiR RpiR-like pro 24.9 2E+02 0.0044 22.5 5.6 84 13-104 12-95 (139)
179 PRK14093 UDP-N-acetylmuramoyla 24.9 6.6E+02 0.014 25.2 10.4 106 28-151 298-412 (479)
180 PF08410 DUF1737: Domain of un 24.9 1.7E+02 0.0036 20.7 4.2 36 16-51 5-41 (54)
181 cd01525 RHOD_Kc Member of the 24.8 1.4E+02 0.0031 22.6 4.5 33 224-259 64-96 (105)
182 cd01533 4RHOD_Repeat_2 Member 24.7 1.4E+02 0.0031 23.0 4.5 32 224-258 65-97 (109)
183 cd01447 Polysulfide_ST Polysul 24.3 93 0.002 23.5 3.3 32 224-258 60-91 (103)
184 cd03412 CbiK_N Anaerobic cobal 24.1 1E+02 0.0023 25.2 3.7 57 239-297 56-112 (127)
185 PRK09271 flavodoxin; Provision 23.9 4.4E+02 0.0095 22.1 8.9 54 17-74 3-59 (160)
186 TIGR02981 phageshock_pspE phag 23.9 1.6E+02 0.0035 23.0 4.6 32 224-258 57-88 (101)
187 PRK08558 adenine phosphoribosy 23.7 5.7E+02 0.012 23.4 10.2 80 15-98 112-206 (238)
188 TIGR02990 ectoine_eutA ectoine 23.5 52 0.0011 30.3 1.9 92 15-108 8-132 (239)
189 PRK15482 transcriptional regul 23.3 1.6E+02 0.0034 27.3 5.2 83 13-103 134-216 (285)
190 PRK08564 5'-methylthioadenosin 22.8 77 0.0017 29.7 2.9 99 11-125 4-110 (267)
191 COG2065 PyrR Pyrimidine operon 22.7 2.3E+02 0.0049 24.9 5.5 69 7-75 23-105 (179)
192 PF02142 MGS: MGS-like domain 22.5 94 0.002 23.8 3.0 47 234-291 16-67 (95)
193 PRK04537 ATP-dependent RNA hel 22.4 1.6E+02 0.0035 30.6 5.5 65 224-297 256-320 (572)
194 TIGR01573 cas2 CRISPR-associat 22.1 1.2E+02 0.0026 23.6 3.4 50 227-276 2-54 (95)
195 cd01526 RHOD_ThiF Member of th 22.0 1.4E+02 0.0029 23.8 3.9 33 224-259 71-104 (122)
196 cd05710 SIS_1 A subgroup of th 21.9 2.2E+02 0.0047 22.7 5.1 80 18-104 3-82 (120)
197 PRK09177 xanthine-guanine phos 21.8 4.9E+02 0.011 22.0 8.5 62 15-79 32-97 (156)
198 PRK05320 rhodanese superfamily 21.7 1.6E+02 0.0034 27.4 4.8 33 223-258 173-205 (257)
199 COG1184 GCD2 Translation initi 21.7 1E+02 0.0022 29.5 3.5 52 237-296 128-182 (301)
200 PF08348 PAS_6: YheO-like PAS 21.6 3.5E+02 0.0076 22.0 6.3 78 25-116 5-83 (118)
201 PF06180 CbiK: Cobalt chelatas 20.8 1.4E+02 0.003 27.9 4.2 56 239-296 58-113 (262)
202 cd01449 TST_Repeat_2 Thiosulfa 20.1 1.9E+02 0.0041 22.4 4.4 33 224-259 77-109 (118)
203 PRK05819 deoD purine nucleosid 20.0 3.7E+02 0.008 24.3 6.8 82 184-268 14-97 (235)
No 1
>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-80 Score=579.90 Aligned_cols=289 Identities=29% Similarity=0.423 Sum_probs=263.7
Q ss_pred CCcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCc--hhHHHHHHHHHHh
Q 020692 14 KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYAL 91 (322)
Q Consensus 14 ~~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~--~~l~elll~~~a~ 91 (322)
.+++++|+|++|++||++||+.|| ++++++++++|||||.+ |+++|+|||+||||+||+++| |+|||||+|+|||
T Consensus 2 ~~~~~if~g~s~~~La~~ia~~l~-~~l~~~~~~rF~DGE~~--V~i~EsVrg~dVfI~qs~~~pvnd~lmELLi~idA~ 78 (314)
T COG0462 2 MNNMKIFSGSSNPELAEKIAKRLG-IPLGKVEVKRFPDGEIY--VRIEESVRGKDVFIIQSTSPPVNDNLMELLIMIDAL 78 (314)
T ss_pred CCceEEEECCCCHHHHHHHHHHhC-CCcccceeEEcCCCcEE--EEecccccCCeEEEEeCCCCCcCHHHHHHHHHHHHH
Confidence 468999999999999999999997 99999999999999855 566799999999999999996 6899999999999
Q ss_pred hhcCccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchHHH
Q 020692 92 PRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPL 171 (322)
Q Consensus 92 ~~~~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~~~ 171 (322)
|++||++||+|+|||||+||||+|++|||+|||++|+||+. +|+|+|+|+|+|++|++|||++|++++ .+.+.
T Consensus 79 k~asA~~It~ViPY~gYARQDk~~~~repIsaklvA~lL~~-----aG~drv~TvDlH~~qiqgfFdipvdnl--~a~p~ 151 (314)
T COG0462 79 KRASAKRITAVIPYFGYARQDKAFKPREPISAKLVANLLET-----AGADRVLTVDLHAPQIQGFFDIPVDNL--YAAPL 151 (314)
T ss_pred HhcCCceEEEEeecchhhccCcccCCCCCEeHHHHHHHHHH-----cCCCeEEEEcCCchhhcccCCCccccc--cchHH
Confidence 99999999999999999999999899999999999999996 499999999999999999999999998 69999
Q ss_pred HHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc-------eEe-cC-ceeeeeccCCCCCCeEEEEeccccChHhHH
Q 020692 172 LKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT-------VRE-GD-KRIVRIKEGNPAGCHVVIVDDLVQSGGTLI 242 (322)
Q Consensus 172 la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~-------~r~-~~-k~~~~~~~~~v~g~~vlivDDii~TG~Tl~ 242 (322)
+++|+.+.+..++++||+||.||++||+.+|+.|+. .|. .. ......+.+|++||+|+|||||++||||+.
T Consensus 152 l~~~~~~~~~~~d~vVVSPD~Ggv~RAr~~A~~L~~~~a~i~K~R~~~~~~v~~~~~~gdV~gk~~iiVDDiIdTgGTi~ 231 (314)
T COG0462 152 LAEYIREKYDLDDPVVVSPDKGGVKRARALADRLGAPLAIIDKRRDSSPNVVEVMNLIGDVEGKDVVIVDDIIDTGGTIA 231 (314)
T ss_pred HHHHHHHhcCCCCcEEECCCccHHHHHHHHHHHhCCCEEEEEEeecCCCCeEEEeecccccCCCEEEEEeccccccHHHH
Confidence 999998864455799999999999999999998886 231 11 122335789999999999999999999999
Q ss_pred HHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCchhhhccCCCeEEEechHHHHHhhc
Q 020692 243 ECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQ 321 (322)
Q Consensus 243 ~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~~~~~~~~~k~~~~~va~~la~~i~ 321 (322)
+|++.|+++||++|+++||||+|++++.++++++. +++|++|||+|++ +. .+++|++++|||++||++|+
T Consensus 232 ~Aa~~Lk~~GAk~V~a~~tH~vfs~~a~~~l~~~~-------i~~vivTnTi~~~-~~-~~~~~~~~isva~liaeaI~ 301 (314)
T COG0462 232 KAAKALKERGAKKVYAAATHGVFSGAALERLEASA-------IDEVIVTDTIPLP-EK-KKIPKVSVISVAPLIAEAIR 301 (314)
T ss_pred HHHHHHHHCCCCeEEEEEEchhhChHHHHHHhcCC-------CCEEEEeCCcccc-cc-cccCceEEEEhHHHHHHHHH
Confidence 99999999999999999999999999999999986 8999999999998 32 45779999999999999985
No 2
>PLN02297 ribose-phosphate pyrophosphokinase
Probab=100.00 E-value=6.1e-76 Score=557.47 Aligned_cols=310 Identities=83% Similarity=1.302 Sum_probs=269.6
Q ss_pred ccCCCcEEEEecCCCHHHHHHHHHHc-CCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCchhHHHHHHHHH
Q 020692 11 KSQKKQVHLFYCVECEELARKVAAQS-DLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIY 89 (322)
Q Consensus 11 ~~~~~~~~i~~g~~~~~la~~ia~~l-g~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~~~l~elll~~~ 89 (322)
+.+++++.||+|+++++||++||+.+ | ++++++++++|||||.+++|++++++||+||||+||+++|+++||||++++
T Consensus 11 ~~~~~~~~i~~g~~~~~LA~~ia~~l~g-~~l~~~~~~~FpDGE~~v~v~~~~~vrg~~V~ivqs~~~pd~lmELLl~~d 89 (326)
T PLN02297 11 KKNKKQVHLFYCEETEELARKIAAESDA-IELGSINWRKFPDGFPNLFINNAHGIRGQHVAFLASFSSPAVIFEQLSVIY 89 (326)
T ss_pred cccCCCeEEEECCCCHHHHHHHHHHhCC-CceeeeEEEECCCCCEEEEEcCCCCcCCCeEEEECCCCCChHHHHHHHHHH
Confidence 44667899999999999999999996 6 999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchH
Q 020692 90 ALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGI 169 (322)
Q Consensus 90 a~~~~~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~ 169 (322)
|||++||++|++|+|||||+||||++++|||+++|.+|+||+.++..++|+|+|++||+|+.+.++||+.|+.++++++.
T Consensus 90 Alr~~ga~~i~~ViPY~~YaRQDr~~~~ge~isak~vA~ll~~~~~~~~g~d~vitvDlH~~~~~~fF~~~~~~l~l~a~ 169 (326)
T PLN02297 90 ALPKLFVASFTLVLPFFPTGTSERVEREGDVATAFTLARILSNIPISRGGPTSLVIFDIHALQERFYFGDNVLPCFESGI 169 (326)
T ss_pred HHHHcCCCEEEEEeeCChhhcCCCCCCCCCCchHHHHHHHHhcccccccCCCEEEEEeCCChHHCCccCCcccchhhccH
Confidence 99999999999999999999999999999999999999999975432258999999999999999999988877655789
Q ss_pred HHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc-----eEecCceeeeeccCCCCCCeEEEEeccccChHhHHHH
Q 020692 170 PLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT-----VREGDKRIVRIKEGNPAGCHVVIVDDLVQSGGTLIEC 244 (322)
Q Consensus 170 ~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~-----~r~~~k~~~~~~~~~v~g~~vlivDDii~TG~Tl~~~ 244 (322)
+.+++||.+..+.+++++|+||.|+++|+..++...+. .|.++........++++||+|+|||||+|||+|+.++
T Consensus 170 ~~l~~~i~~~~~~~~~vvVsPD~Ga~~ra~~~a~~~~~~~~~K~R~g~~~~~~~~~~dv~gr~vlIVDDIidTG~Tl~~a 249 (326)
T PLN02297 170 PLLKKRLQQLPDSDNIVIAFPDDGAWKRFHKQFEHFPMVVCTKVREGDKRIVRIKEGNPAGRHVVIVDDLVQSGGTLIEC 249 (326)
T ss_pred HHHHHHHHhccccCCcEEEecCccHHHHHHHHcCCCCEEEEEeEECCCceEEEecccccCCCeEEEEecccCcHHHHHHH
Confidence 99999997642257889999999999999888743333 2333323333467889999999999999999999999
Q ss_pred HHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCchhhhccCCCeEEEechHHHHHhhcC
Q 020692 245 QKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQI 322 (322)
Q Consensus 245 ~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~~~~~~~~~k~~~~~va~~la~~i~~ 322 (322)
++.|+++||++|+++||||+|+++|.++|.++. +|++..+++||+|||||++.+....++|++++|++++||++|+|
T Consensus 250 a~~L~~~Ga~~V~~~~THglfs~~a~~~l~~~~-~~~~~~i~~iv~TdTip~~~~~~~~~~k~~~isva~llAe~i~~ 326 (326)
T PLN02297 250 QKVLAAHGAAKVSAYVTHGVFPNESWERFTHDN-GGPEAGFAYFWITDSCPQTVKAVRGKAPFEVLSLAGSIADALQI 326 (326)
T ss_pred HHHHHHCCCcEEEEEEECcccChhHHHHHHhcc-cccccCcCEEEEcCCccCChhhcccCCCcEEEEcHHHHHHHhcC
Confidence 999999999999999999999999999999740 01111189999999999976522345899999999999999986
No 3
>PRK04923 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=2.6e-74 Score=547.24 Aligned_cols=293 Identities=25% Similarity=0.345 Sum_probs=261.7
Q ss_pred ccCCCcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCc--hhHHHHHHHH
Q 020692 11 KSQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVI 88 (322)
Q Consensus 11 ~~~~~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~--~~l~elll~~ 88 (322)
|+..+++.||+|+++++||++||+.|| ++++++++++|||||.++ ++++++||+||||+||++.| |++||||+++
T Consensus 1 ~~~~~~~~i~~g~~~~~La~~ia~~lg-~~l~~~~~~~FpdGE~~v--~i~~~v~g~~V~iiqs~~~p~nd~lmeLl~~~ 77 (319)
T PRK04923 1 MQDQRNLLVFSGNANKPLAQSICKELG-VRMGKALVTRFSDGEVQV--EIEESVRRQEVFVIQPTCAPSAENLMELLVLI 77 (319)
T ss_pred CCCCCceEEEECCCCHHHHHHHHHHhC-CceeeeEEEECCCCCEEE--EECCCcCCCeEEEEecCCCCCchHHHHHHHHH
Confidence 345688999999999999999999997 999999999999999555 55699999999999999865 6899999999
Q ss_pred HHhhhcCccceEEeeccCCCCccchhccC-CCcccHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccc
Q 020692 89 YALPRLFVASFTLVLPFFPTGSFERMEEE-GDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFET 167 (322)
Q Consensus 89 ~a~~~~~a~~i~~viPY~~YsRqdr~~~~-ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~ 167 (322)
+|||++||++|++|+|||||+||||++++ ++|+++|.+|+||+. +|+|+|+++|+|+.+.++||++|++++ +
T Consensus 78 ~alr~~~a~~i~~ViPYl~YaRQDr~~~~~~~~isak~va~ll~~-----~g~d~vitvD~H~~~~~~~f~~p~~~l--~ 150 (319)
T PRK04923 78 DALKRASAASVTAVIPYFGYSRQDRRMRSSRVPITAKVAAKMISA-----MGADRVLTVDLHADQIQGFFDVPVDNV--Y 150 (319)
T ss_pred HHHHHcCCcEEEEEeeccccccccccccCCCCCccHHHHHHHHHh-----cCCCEEEEEeCChHHHHhhcCCCceee--e
Confidence 99999999999999999999999999965 679999999999996 489999999999999999999999987 6
Q ss_pred hHHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCC-c-e------EecCc-eeeeeccCCCCCCeEEEEeccccCh
Q 020692 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFP-T-V------REGDK-RIVRIKEGNPAGCHVVIVDDLVQSG 238 (322)
Q Consensus 168 ~~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~-~-~------r~~~k-~~~~~~~~~v~g~~vlivDDii~TG 238 (322)
+.+++++||.+.++.+++++|+||.|+++||+.+++.|+ . . |.... .......++++||+|+|||||+|||
T Consensus 151 ~~~~l~~~i~~~~~~~~~vVVsPD~Ga~~rA~~lA~~L~~~~~~~~~K~R~~~~~~~~~~~~gdv~Gr~viIVDDIidTG 230 (319)
T PRK04923 151 ASPLLLADIWRAYGTDNLIVVSPDVGGVVRARAVAKRLDDADLAIIDKRRPRANVATVMNIIGDVQGKTCVLVDDLVDTA 230 (319)
T ss_pred ChHHHHHHHHHhcCCCCCEEEEECCchHHHHHHHHHHcCCCCEEEeccccCCCCceEEEecccCCCCCEEEEEecccCch
Confidence 889999999654346789999999999999999999886 3 1 21111 1122357899999999999999999
Q ss_pred HhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCchhhhccCCCeEEEechHHHHH
Q 020692 239 GTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIAD 318 (322)
Q Consensus 239 ~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~~~~~~~~~k~~~~~va~~la~ 318 (322)
+|+.++++.|+++||++|+++||||+|+++|.++|.+++ +++||+|||+|++.+. +.++|++++||+++||+
T Consensus 231 ~Tl~~aa~~Lk~~GA~~V~~~~THgvfs~~a~~~l~~s~-------i~~iv~Tdtip~~~~~-~~~~k~~~isva~lla~ 302 (319)
T PRK04923 231 GTLCAAAAALKQRGALKVVAYITHPVLSGPAVDNINNSQ-------LDELVVTDTIPLSEAA-RACAKIRQLSVAELLAE 302 (319)
T ss_pred HHHHHHHHHHHHCCCCEEEEEEECcccCchHHHHHhhCC-------CCEEEEeCCccCchhh-cccCCeEEEEhHHHHHH
Confidence 999999999999999999999999999999999999887 8999999999997542 35789999999999999
Q ss_pred hhc
Q 020692 319 ALQ 321 (322)
Q Consensus 319 ~i~ 321 (322)
+|+
T Consensus 303 ~i~ 305 (319)
T PRK04923 303 TIR 305 (319)
T ss_pred HHH
Confidence 985
No 4
>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional
Probab=100.00 E-value=1.6e-73 Score=555.49 Aligned_cols=288 Identities=26% Similarity=0.335 Sum_probs=259.3
Q ss_pred CcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCc--hhHHHHHHHHHHhh
Q 020692 15 KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYALP 92 (322)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~--~~l~elll~~~a~~ 92 (322)
+++.||+|+++++||++||+.|| ++++++++++|||||+++ +++++|||+||||+||+++| |++||||++++|||
T Consensus 118 ~~m~I~sgs~~~~LA~~IA~~Lg-~~l~~~~~~rFpDGE~~V--ri~e~VrG~dV~IVqS~~~pvNd~LmELLllidAlr 194 (439)
T PTZ00145 118 ENAILFSGSSNPLLSKNIADHLG-TILGRVHLKRFADGEVSM--QFLESIRGKDVYIIQPTCPPVNENLIELLLMISTCR 194 (439)
T ss_pred CCeEEEECCCCHHHHHHHHHHhC-CCceeeEEEECCCCCEEE--EECCCcCCCeEEEEecCCCCCcHHHHHHHHHHHHHH
Confidence 78999999999999999999997 999999999999999555 55799999999999999876 67999999999999
Q ss_pred hcCccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccC--CCCCccccchHH
Q 020692 93 RLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFS--DHVLPLFETGIP 170 (322)
Q Consensus 93 ~~~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~--~~v~~l~~~~~~ 170 (322)
++||++|++|+|||||+||||++++|||++++.+|+||+. +|+|+|++||+|+.+.+|||+ +|++++ .+.+
T Consensus 195 ~agAkrItlViPYl~YaRQDR~~~~gepIsak~vA~lL~~-----~G~d~VitvDlHs~~i~~fF~~~iPvdnl--~a~~ 267 (439)
T PTZ00145 195 RASAKKITAVIPYYGYARQDRKLSSRVPISAADVARMIEA-----MGVDRVVAIDLHSGQIQGFFGPRVPVDNL--EAQL 267 (439)
T ss_pred HhccCeEEEEeecccchheecccCCCCChhHHHHHHHHHH-----cCCCeEEEEecChHHHHhhcCCCcccccc--cccH
Confidence 9999999999999999999999999999999999999996 489999999999999999996 788887 6789
Q ss_pred HHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCC------c-------eEecCcee-eeeccCCCCCCeEEEEecccc
Q 020692 171 LLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFP------T-------VREGDKRI-VRIKEGNPAGCHVVIVDDLVQ 236 (322)
Q Consensus 171 ~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~------~-------~r~~~k~~-~~~~~~~v~g~~vlivDDii~ 236 (322)
.+++|+.+. +..++++|+||.|+.+||+.+++.|+ . .|...... ...+.++++||+|+|||||+|
T Consensus 268 ~~a~~i~~~-~l~~pVVVsPD~Ga~~RAr~~A~~L~~~~~~~~~~avl~K~R~~~~~v~~~~lvgdV~Gk~vIIVDDIId 346 (439)
T PTZ00145 268 IGLDYFTKK-DLYKPVIVSPDAGGVYRARKFQDGLNHRGISDCGIAMLIKQRTKPNEIEKMDLVGNVYDSDVIIVDDMID 346 (439)
T ss_pred HHHHHHhhc-CCCccEEEccCcchHHHHHHHHHHhccccccCCCEEEEEeecCCCCceEEEeccCCCCCCEEEEEcceeC
Confidence 999999764 35789999999999999999998775 2 12121111 123578999999999999999
Q ss_pred ChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCchhhhccCCCeEEEechHHH
Q 020692 237 SGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSI 316 (322)
Q Consensus 237 TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~~~~~~~~~k~~~~~va~~l 316 (322)
||+|+.++++.|+++||++|+++||||+|+++|.++|.+++ +++||+|||||++.+ ...++|++++||+++|
T Consensus 347 TG~Tl~~aa~~Lk~~GA~~V~~~~THglfs~~A~~rl~~s~-------i~~IvvTdTIp~~~~-~~~~~k~~visVA~ll 418 (439)
T PTZ00145 347 TSGTLCEAAKQLKKHGARRVFAFATHGLFSGPAIERIEASP-------LEEVVVTDTVKSNKN-IDSCKKITKLSVSVLV 418 (439)
T ss_pred cHHHHHHHHHHHHHcCCCEEEEEEEcccCChhHHHHHhcCC-------CCEEEEeCCCcCchh-hcccCCeEEEEhHHHH
Confidence 99999999999999999999999999999999999999998 899999999999764 2457899999999999
Q ss_pred HHhhc
Q 020692 317 ADALQ 321 (322)
Q Consensus 317 a~~i~ 321 (322)
|++|+
T Consensus 419 AeaI~ 423 (439)
T PTZ00145 419 ADAIR 423 (439)
T ss_pred HHHHH
Confidence 99985
No 5
>PRK02269 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=2.6e-73 Score=541.46 Aligned_cols=288 Identities=27% Similarity=0.389 Sum_probs=259.6
Q ss_pred CcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCc--hhHHHHHHHHHHhh
Q 020692 15 KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYALP 92 (322)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~--~~l~elll~~~a~~ 92 (322)
+++.||+|+++++||++||+.|| ++++++++++|||||.++ ++.+++||+||||+||+++| |++||||++++|||
T Consensus 4 ~~~~i~~~~~~~~la~~ia~~lg-~~l~~~~~~~FpdGE~~v--~i~~~vrg~dV~iv~s~~~~~nd~lmelll~~~alr 80 (320)
T PRK02269 4 SDLKLFALSSNKELAEKVAQEIG-IELGKSSVRQFSDGEIQV--NIEESIRGHHVFILQSTSSPVNDNLMEILIMVDALK 80 (320)
T ss_pred CCeEEEECCCCHHHHHHHHHHhC-CceeeeEEEECCCCCEEE--EECCCCCCCEEEEEecCCCCccchHHHHHHHHHHHH
Confidence 36999999999999999999997 999999999999999655 55699999999999999875 68999999999999
Q ss_pred hcCccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchHHHH
Q 020692 93 RLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLL 172 (322)
Q Consensus 93 ~~~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~~~l 172 (322)
++||++|++|+|||||+||||++++|||+++|.+|+||+. +|+|+|+++|+|+.+.++||+.|++++ .+.+++
T Consensus 81 ~~~a~~i~~V~PYl~YaRQDr~~~~~e~isak~~a~ll~~-----~g~d~vit~D~H~~~~~~~f~~p~~~l--~~~p~l 153 (320)
T PRK02269 81 RASAESINVVMPYYGYARQDRKARSREPITSKLVANMLEV-----AGVDRLLTVDLHAAQIQGFFDIPVDHL--MGAPLI 153 (320)
T ss_pred HhCCCeEEEEEeccccchhhcccCCCCCchHHHHHHHHhh-----cCCCEEEEECCChHHHhccccCCchhh--hhHHHH
Confidence 9999999999999999999999999999999999999996 489999999999999999999999887 789999
Q ss_pred HHHHhcC-CCCCCceEeccCCchHHHHHHHhccCCc----eEecC---c---eeeeeccCCCCCCeEEEEeccccChHhH
Q 020692 173 KQRLHQL-PDANNIVIAFPDDGAWKRFHKMLDHFPT----VREGD---K---RIVRIKEGNPAGCHVVIVDDLVQSGGTL 241 (322)
Q Consensus 173 a~~l~~~-~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~~~---k---~~~~~~~~~v~g~~vlivDDii~TG~Tl 241 (322)
++|+.+. ++.+++++|+||.|+++||+.+++.|+. .++.. + .......++++||+|+|||||+|||+|+
T Consensus 154 ~~~i~~~~~~~~~~vvVsPd~G~~~~A~~lA~~lg~~~~~~~k~r~~~~~~~~~~~~~~gdv~Gr~viIVDDIidTG~Tl 233 (320)
T PRK02269 154 ADYFDRRGLVGDDVVVVSPDHGGVTRARKLAQFLKTPIAIIDKRRSVDKMNTSEVMNIIGNVKGKKCILIDDMIDTAGTI 233 (320)
T ss_pred HHHHHHhCCCCCCcEEEEECccHHHHHHHHHHHhCCCEEEEEecccCCCCceeEEEEeccccCCCEEEEEeeecCcHHHH
Confidence 9999764 2347889999999999999999998876 12211 1 1122357889999999999999999999
Q ss_pred HHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCchhhhccCCCeEEEechHHHHHhhc
Q 020692 242 IECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQ 321 (322)
Q Consensus 242 ~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~~~~~~~~~k~~~~~va~~la~~i~ 321 (322)
.++++.|+++||++|+++||||+|+++|.++|.+++ +++|++|||+|++... .++|++++||+++||++|+
T Consensus 234 ~~aa~~Lk~~GA~~V~~~~tHglf~~~a~~~l~~~~-------i~~iv~Tdti~~~~~~--~~~k~~~isva~~la~~i~ 304 (320)
T PRK02269 234 CHAADALAEAGATEVYASCTHPVLSGPALDNIQKSA-------IEKLVVLDTIYLPEER--LIDKIEQISIADLLGEAII 304 (320)
T ss_pred HHHHHHHHHCCCCEEEEEEECcccCchHHHHHHhCC-------CCEEEEeCCCCCcccc--ccCCeEEEEhHHHHHHHHH
Confidence 999999999999999999999999999999999987 8999999999987642 4789999999999999985
No 6
>PRK00553 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=8e-73 Score=539.74 Aligned_cols=290 Identities=25% Similarity=0.355 Sum_probs=260.1
Q ss_pred CCCcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCc--hhHHHHHHHHHH
Q 020692 13 QKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYA 90 (322)
Q Consensus 13 ~~~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~--~~l~elll~~~a 90 (322)
.++++.||+|+++++||++||+.|| ++++++++++|||||.++ ++.+++||+||||+||+++| |++||||++++|
T Consensus 6 ~~~~~~i~~~~~~~~La~~ia~~lg-~~l~~~~~~~FpdGE~~v--~i~~~vrg~dV~ivqs~~~p~nd~l~eLll~~~a 82 (332)
T PRK00553 6 DKSNHVIFSLSKAKKLVDSICRKLS-MKPGEIVIQKFADGETYI--RFDESVRNKDVVIFQSTCSPVNDSLMELLIAIDA 82 (332)
T ss_pred CCCCeEEEECCCCHHHHHHHHHHhC-CceeeeEEEECCCCCEEE--EECCCCCCCEEEEEcCCCCCCchHHHHHHHHHHH
Confidence 5789999999999999999999997 999999999999998555 55699999999999999875 689999999999
Q ss_pred hhhcCccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchHH
Q 020692 91 LPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIP 170 (322)
Q Consensus 91 ~~~~~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~~ 170 (322)
||++||++|++|+|||||+||||++++|+|+++|.+|+||+. +|+|+|+++|+|+.+.+|||++|++++ .+.+
T Consensus 83 lr~~~a~~i~~ViPYl~YaRQDr~~~~~e~isak~vA~ll~~-----~g~d~vit~DlH~~~i~~~F~ipv~~l--~a~~ 155 (332)
T PRK00553 83 LKRGSAKSITAILPYYGYARQDRKTAGREPITSKLVADLLTK-----AGVTRVTLTDIHSDQTQGFFDIPVDIL--RTYH 155 (332)
T ss_pred HHHcCCCeEEEEeeccccchhhcccCCCCCccHHHHHHHHHh-----cCCCEEEEEeCChHHHHhhcCCCccee--echH
Confidence 999999999999999999999999999999999999999996 489999999999999999999999987 6889
Q ss_pred HHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc----eEecC---ce-eeeeccCCCCCCeEEEEeccccChHhHH
Q 020692 171 LLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT----VREGD---KR-IVRIKEGNPAGCHVVIVDDLVQSGGTLI 242 (322)
Q Consensus 171 ~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~~~---k~-~~~~~~~~v~g~~vlivDDii~TG~Tl~ 242 (322)
++++|+.+..+.+++++|+||.||++||+.+++.++. .++.. .. ......++++||+|+|||||++||+|+.
T Consensus 156 ~~~~~~~~~~~~~~~vvVsPD~gg~~rA~~lA~~lg~~~~vi~K~r~~~~~~~~~~~~gdv~Gk~VIIVDDIi~TG~Tl~ 235 (332)
T PRK00553 156 VFLSRVLELLGKKDLVVVSPDYGGVKRARLIAESLELPLAIIDKRRPKHNVAESINVLGEVKNKNCLIVDDMIDTGGTVI 235 (332)
T ss_pred HHHHHHHHhcCCCCeEEEEECCCcHHHHHHHHHHhCCCEEEEEEecCCcceEeeEEeeccCCCCEEEEEeccccchHHHH
Confidence 9999996533467899999999999999999988876 12211 11 1112467899999999999999999999
Q ss_pred HHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcc----cCCCccCCcCEEEEecCCcCchhhhccCCCeEEEechHHHHH
Q 020692 243 ECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLK----NGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIAD 318 (322)
Q Consensus 243 ~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s----~~~g~~~~~~~iv~Tdti~~~~~~~~~~~k~~~~~va~~la~ 318 (322)
++++.|+++||++|+++||||+|+++|.++|.++ + +++||+|||+|++.. ..++|++++|||++||+
T Consensus 236 ~aa~~Lk~~GA~~V~~~atHglf~~~a~~~l~~~~~~~~-------i~~iv~Tntip~~~~--~~~~~~~~vsva~~la~ 306 (332)
T PRK00553 236 AAAKLLKKQKAKKVCVMATHGLFNKNAIQLFDEAFKKKL-------IDKLFVSNSIPQTKF--EKKPQFKVVDLAHLYEE 306 (332)
T ss_pred HHHHHHHHcCCcEEEEEEEeeecCchHHHHHHhccccCC-------CCEEEEeCCccCccc--ccCCCeEEEEhHHHHHH
Confidence 9999999999999999999999999999999765 5 899999999998753 24689999999999999
Q ss_pred hhc
Q 020692 319 ALQ 321 (322)
Q Consensus 319 ~i~ 321 (322)
+|+
T Consensus 307 ~i~ 309 (332)
T PRK00553 307 VLL 309 (332)
T ss_pred HHH
Confidence 985
No 7
>PRK02458 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=1e-72 Score=537.52 Aligned_cols=290 Identities=26% Similarity=0.392 Sum_probs=260.7
Q ss_pred cCCCcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCc--hhHHHHHHHHH
Q 020692 12 SQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIY 89 (322)
Q Consensus 12 ~~~~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~--~~l~elll~~~ 89 (322)
..++++.||+|+++++||++||+.|| ++++++++++|||||.++ +++++++|+||+++||++.| |++||||++++
T Consensus 5 ~~~~~~~i~~~~~~~~la~~ia~~lg-~~l~~~~~~~FpdGE~~v--~i~~~v~g~dV~ii~s~~~~~nd~l~eLll~~~ 81 (323)
T PRK02458 5 YADKQIKLFSLNSNLEIAEKIAQAAG-VPLGKLSSRQFSDGEIMI--NIEESVRGDDIYIIQSTSFPVNDHLWELLIMID 81 (323)
T ss_pred cCCCCeEEEECCCCHHHHHHHHHHhC-CceeeeEEEECCCCCEEE--EecCCcCCCeEEEEecCCCCCchHHHHHHHHHH
Confidence 45678999999999999999999997 999999999999999555 55699999999999999765 67999999999
Q ss_pred HhhhcCccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchH
Q 020692 90 ALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGI 169 (322)
Q Consensus 90 a~~~~~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~ 169 (322)
|||++||++|++|+|||||+||||++++|||+++|.+|+||+. +|+|+|+++|+|+.+.++||++|++++ .+.
T Consensus 82 alr~~~a~~i~lViPYl~YaRQDr~~~~ge~isak~~a~lL~~-----~g~d~vitvD~H~~~i~~~F~~p~~nl--~~~ 154 (323)
T PRK02458 82 ACKRASANTVNVVLPYFGYARQDRIAKPREPITAKLVANMLVK-----AGVDRVLTLDLHAVQVQGFFDIPVDNL--FTV 154 (323)
T ss_pred HHHHcCCceEEEEEeccccchhhcccCCCCCchHHHHHHHHhh-----cCCCeEEEEecCcHHhhccccCCceEE--EEH
Confidence 9999999999999999999999999999999999999999996 489999999999999999999999987 689
Q ss_pred HHHHHHHhcC-CCCCCceEeccCCchHHHHHHHhccCCc----eEe--cC-ceeeeeccCCCCCCeEEEEeccccChHhH
Q 020692 170 PLLKQRLHQL-PDANNIVIAFPDDGAWKRFHKMLDHFPT----VRE--GD-KRIVRIKEGNPAGCHVVIVDDLVQSGGTL 241 (322)
Q Consensus 170 ~~la~~l~~~-~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~--~~-k~~~~~~~~~v~g~~vlivDDii~TG~Tl 241 (322)
+++++|+.+. ++.+++++|+||.|+++||+.+++.|+. .+. .. ........++++||+|+|||||++||+|+
T Consensus 155 p~~~~~l~~~~~~~~~~vvV~pd~Ga~~~A~~la~~L~~~~~~~~~~r~~~~~~~~~i~gdV~gk~viIVDDIidTG~Tl 234 (323)
T PRK02458 155 PLFAKHYCKKGLSGSDVVVVSPKNSGIKRARSLAEYLDAPIAIIDYAQDDSEREEGYIIGDVAGKKAILIDDILNTGKTF 234 (323)
T ss_pred HHHHHHHHHhCCCCCceEEEEECCChHHHHHHHHHHhCCCEEEEEEecCCCcceeeccccccCCCEEEEEcceeCcHHHH
Confidence 9999999664 3347899999999999999999998876 121 11 11112356799999999999999999999
Q ss_pred HHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCchhhhccCCCeEEEechHHHHHhhc
Q 020692 242 IECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQ 321 (322)
Q Consensus 242 ~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~~~~~~~~~k~~~~~va~~la~~i~ 321 (322)
.++++.|+++||++|+++||||+|+++|.++|.+++ +++|++|||+|++.+ .++|++++||+++||++|+
T Consensus 235 ~~aa~~Lk~~GA~~V~~~~tHgif~~~a~~~l~~s~-------i~~iv~TdTi~~~~~---~~~k~~~isva~lla~~i~ 304 (323)
T PRK02458 235 AEAAKIVEREGATEIYAVASHGLFAGGAAEVLENAP-------IKEILVTDSVATKER---VPKNVTYLSASELIADAII 304 (323)
T ss_pred HHHHHHHHhCCCCcEEEEEEChhcCchHHHHHhhCC-------CCEEEEECCcCCchh---cCCCcEEEEhHHHHHHHHH
Confidence 999999999999999999999999999999999998 899999999998642 3679999999999999985
No 8
>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional
Probab=100.00 E-value=1.3e-70 Score=518.95 Aligned_cols=277 Identities=23% Similarity=0.306 Sum_probs=248.3
Q ss_pred cEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCc-hhHHHHHHHHHHhhhc
Q 020692 16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPRL 94 (322)
Q Consensus 16 ~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~-~~l~elll~~~a~~~~ 94 (322)
++.||+|++|++||++||+.|| ++++++++++|||||.++ ++.+++||+||||+||+++| |++||||++++|||++
T Consensus 2 ~~~i~~~~~~~~la~~ia~~lg-~~~~~~~~~~F~dGE~~v--~i~~~v~g~~V~ivqs~~~~n~~l~elll~~~alr~~ 78 (301)
T PRK07199 2 QPLLLALPGNEAAAGRLAAALG-VEVGRIELHRFPDGESYV--RLDSPVAGRTVVLVCSLDRPDEKLLPLLFAAEAAREL 78 (301)
T ss_pred ceEEEECCCCHHHHHHHHHHhC-CceeeeEEEECCCCCEEE--EECCCCCCCEEEEECCCCCCcHHHHHHHHHHHHHHHc
Confidence 4689999999999999999997 999999999999999665 55699999999999999875 6799999999999999
Q ss_pred CccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCCh---hhhhcccCCCCCccccchHHH
Q 020692 95 FVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHA---LQERFYFSDHVLPLFETGIPL 171 (322)
Q Consensus 95 ~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs---~~~~g~f~~~v~~l~~~~~~~ 171 (322)
||++|++|+|||||+||||++++|||+++|.+|+||+. |+|+|+++|+|+ .+.+|||++|++++ ++.+.
T Consensus 79 ~a~~i~~ViPY~~YaRqDr~~~~ge~isak~vA~ll~~------~~d~vit~DlH~~~~~~~~~~f~ip~~nl--~~~~~ 150 (301)
T PRK07199 79 GARRVGLVAPYLAYMRQDIAFHPGEAISQRHFARLLSG------SFDRLVTVDPHLHRYPSLSEVYPIPAVVL--SAAPA 150 (301)
T ss_pred CCCeEEEEeecccccccccccCCCCCccHHHHHHHHHh------hcCeEEEEeccchhhHHhcCcccCCcccc--chHHH
Confidence 99999999999999999999999999999999999983 799999999997 57899999999987 68999
Q ss_pred HHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc----e---EecCcee-ee-eccCCCCCCeEEEEeccccChHhHH
Q 020692 172 LKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT----V---REGDKRI-VR-IKEGNPAGCHVVIVDDLVQSGGTLI 242 (322)
Q Consensus 172 la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~---r~~~k~~-~~-~~~~~v~g~~vlivDDii~TG~Tl~ 242 (322)
+++||.+. .+++++|+||.|+.+|++.+++.++. . |.+.+.. .. ...++++||+|+|||||+|||+|+.
T Consensus 151 la~~l~~~--~~~~vVVsPd~g~~~~a~~la~~l~~~~~~~~K~R~~~~~~~~~~~~~~~v~Gr~vIIVDDIidTG~Tl~ 228 (301)
T PRK07199 151 IAAWIRAH--VPRPLLIGPDEESEQWVAAVAERAGAPHAVLRKTRHGDRDVEISLPDAAPWAGRTPVLVDDIVSTGRTLI 228 (301)
T ss_pred HHHHHHhc--CCCcEEEEeCCChHHHHHHHHHHhCCCEEEEEEEecCCCeEEEEeccCcccCCCEEEEEecccCcHHHHH
Confidence 99999764 56889999999999999999988776 1 2222211 11 2245689999999999999999999
Q ss_pred HHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCchhhhccCCCeEEEechHHHHHhhc
Q 020692 243 ECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQ 321 (322)
Q Consensus 243 ~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~~~~~~~~~k~~~~~va~~la~~i~ 321 (322)
++++.|+++||++|+++||||+|+++|.++|.+++ +++|++|||+|++. .++||+++||++|+
T Consensus 229 ~aa~~Lk~~GA~~V~~~~tHgvfs~~a~~~l~~~~-------i~~iv~Tdti~~~~---------~~~sva~lla~~i~ 291 (301)
T PRK07199 229 EAARQLRAAGAASPDCVVVHALFAGDAYSALAAAG-------IARVVSTDTVPHPS---------NAISLAPLLAEALR 291 (301)
T ss_pred HHHHHHHHCCCcEEEEEEEeeeCChHHHHHHHhCC-------CCEEEEeCCccCCC---------CEEehHHHHHHHHH
Confidence 99999999999999999999999999999999987 89999999999853 26899999999985
No 9
>PRK02812 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=3.3e-70 Score=521.05 Aligned_cols=290 Identities=25% Similarity=0.385 Sum_probs=260.1
Q ss_pred cCCCcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCc--hhHHHHHHHHH
Q 020692 12 SQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIY 89 (322)
Q Consensus 12 ~~~~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~--~~l~elll~~~ 89 (322)
+..++++||+|+++++||++||+.|| ++++++++++|||||.++ ++++++||+||||+||++.| |++||||++++
T Consensus 17 ~~~~~~~i~~g~~~~~la~~ia~~lg-~~l~~~~~~~FpDGE~~v--~i~~~vrg~~V~ivqs~~~p~nd~l~eLll~~~ 93 (330)
T PRK02812 17 SDNNRLRLFSGSSNPALAQEVARYLG-MDLGPMIRKRFADGELYV--QIQESIRGCDVYLIQPTCAPVNDHLMELLIMVD 93 (330)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHhC-CCceeeEEEECCCCCEEE--EeCCCCCCCEEEEECCCCCCccHHHHHHHHHHH
Confidence 35678999999999999999999997 999999999999999555 55699999999999999766 67999999999
Q ss_pred HhhhcCccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchH
Q 020692 90 ALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGI 169 (322)
Q Consensus 90 a~~~~~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~ 169 (322)
|||++||++|++|+|||||+||||++++|+|+++|.+|+||+. +|+|+|+++|+|+.+.++||++|++++ ++.
T Consensus 94 alr~~ga~ri~~ViPYl~YaRQDr~~~~~e~isak~vA~lL~~-----~g~d~vitvDlH~~~~~~fF~ipv~nl--~~~ 166 (330)
T PRK02812 94 ACRRASARQITAVIPYYGYARADRKTAGRESITAKLVANLITK-----AGADRVLAMDLHSAQIQGYFDIPCDHV--YGS 166 (330)
T ss_pred HHHHhCCceEEEEEecccccccccccCCCCCchHHHHHHHHHh-----cCCCEEEEEECCchHHcCccCCCceee--eCh
Confidence 9999999999999999999999999999999999999999996 489999999999999999999999987 789
Q ss_pred HHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCC-c----e---EecCce-eeeeccCCCCCCeEEEEeccccChHh
Q 020692 170 PLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFP-T----V---REGDKR-IVRIKEGNPAGCHVVIVDDLVQSGGT 240 (322)
Q Consensus 170 ~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~-~----~---r~~~k~-~~~~~~~~v~g~~vlivDDii~TG~T 240 (322)
+.+++||.+. ..+++++|+||.|+.+||+.+++.|+ . . |..... ......++++||+|+|||||++||+|
T Consensus 167 ~~l~~~i~~~-~~~~~vvVsPD~gg~~ra~~~A~~L~~~~~~~~~k~R~~~~~~~~~~~~~~v~g~~viiVDDii~TG~T 245 (330)
T PRK02812 167 PVLLDYLASK-NLEDIVVVSPDVGGVARARAFAKKLNDAPLAIIDKRRQAHNVAEVLNVIGDVKGKTAILVDDMIDTGGT 245 (330)
T ss_pred HHHHHHHHhc-CCCCeEEEEECCccHHHHHHHHHHhCCCCEEEEEeeccCCceeeeEeccccCCCCEEEEEccccCcHHH
Confidence 9999999764 36789999999999999999998884 2 1 211111 11234678999999999999999999
Q ss_pred HHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCchhhhccCCCeEEEechHHHHHhh
Q 020692 241 LIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADAL 320 (322)
Q Consensus 241 l~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~~~~~~~~~k~~~~~va~~la~~i 320 (322)
+.++++.|+++||++|++++|||+|++++.++|.+++ +++|+||||+|++.. ..+++++++||+++||++|
T Consensus 246 ~~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~~~-------id~iv~tnti~~~~~--~~~~~~~~~~va~lla~~i 316 (330)
T PRK02812 246 ICEGARLLRKEGAKQVYACATHAVFSPPAIERLSSGL-------FEEVIVTNTIPVPEE--RRFPQLKVLSVANMLGEAI 316 (330)
T ss_pred HHHHHHHHhccCCCeEEEEEEcccCChHHHHHHhhCC-------CCEEEEeCCCCChhh--cccCCceEEEHHHHHHHHH
Confidence 9999999999999999999999999999999999877 899999999998653 3468999999999999998
Q ss_pred c
Q 020692 321 Q 321 (322)
Q Consensus 321 ~ 321 (322)
+
T Consensus 317 ~ 317 (330)
T PRK02812 317 W 317 (330)
T ss_pred H
Confidence 5
No 10
>PRK03092 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=8.4e-70 Score=514.11 Aligned_cols=275 Identities=26% Similarity=0.391 Sum_probs=248.5
Q ss_pred HHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCc--hhHHHHHHHHHHhhhcCccceEEeecc
Q 020692 28 LARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYALPRLFVASFTLVLPF 105 (322)
Q Consensus 28 la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~--~~l~elll~~~a~~~~~a~~i~~viPY 105 (322)
||++||+.|| ++++++++++|||||.++ +++++|||+||||+||+++| |++||||++++|||++||++|++|+||
T Consensus 1 la~~ia~~l~-~~l~~~~~~~F~DGE~~v--ri~~~v~g~~v~ii~s~~~p~nd~l~ell~~~~a~r~~~a~~i~~ViPY 77 (304)
T PRK03092 1 LAEEVAKELG-VEVTPTTAYDFANGEIYV--RFEESVRGCDAFVLQSHTAPINKWLMEQLIMIDALKRASAKRITVVLPF 77 (304)
T ss_pred CHHHHHHHhC-CceeeeEEEECCCCCEEE--EECCCCCCCEEEEEeCCCCCCcHHHHHHHHHHHHHHHcCCCeEEEEEec
Confidence 6899999997 999999999999998555 55699999999999999876 679999999999999999999999999
Q ss_pred CCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchHHHHHHHHhcCCCCCCc
Q 020692 106 FPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQLPDANNI 185 (322)
Q Consensus 106 ~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~~~la~~l~~~~~~~~~ 185 (322)
|||+||||++++|||+++|.+|+||+. +|+|+|+++|+|+.+.++||+.|++++ ++.+.+++||.+.+..+++
T Consensus 78 l~YaRQDr~~~~~e~isak~va~lL~~-----~g~d~vitvD~H~~~~~~~f~~p~~~l--~~~~~la~~i~~~~~~~~~ 150 (304)
T PRK03092 78 YPYARQDKKHRGREPISARLVADLFKT-----AGADRIMTVDLHTAQIQGFFDGPVDHL--FAMPLLADYVRDKYDLDNV 150 (304)
T ss_pred ccccccccccCCCCCccHHHHHHHHHh-----cCCCeEEEEecChHHHHhhcCCCeeeE--echHHHHHHHHHhcCCCCc
Confidence 999999999999999999999999996 489999999999999999999999988 7899999999765456889
Q ss_pred eEeccCCchHHHHHHHhccCC-c----e---EecCc---eeeeeccCCCCCCeEEEEeccccChHhHHHHHHHHHHcCCC
Q 020692 186 VIAFPDDGAWKRFHKMLDHFP-T----V---REGDK---RIVRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAA 254 (322)
Q Consensus 186 vvV~Pd~Ga~~ra~~~a~~L~-~----~---r~~~k---~~~~~~~~~v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~ 254 (322)
++|+||.|+++||+.+++.|+ . + |.... .......++++||+|+|||||++||+|+.++++.|+++||+
T Consensus 151 vvVspd~Ga~~~a~~la~~L~~~~~~~i~k~R~~~~~~~~~~~~~~~dv~gr~viIVDDIi~TG~Tl~~aa~~Lk~~Ga~ 230 (304)
T PRK03092 151 TVVSPDAGRVRVAEQWADRLGGAPLAFIHKTRDPTVPNQVVANRVVGDVEGRTCVLVDDMIDTGGTIAGAVRALKEAGAK 230 (304)
T ss_pred EEEEecCchHHHHHHHHHHcCCCCEEEEEEEcccCCCCceEEEecCcCCCCCEEEEEccccCcHHHHHHHHHHHHhcCCC
Confidence 999999999999999999887 4 1 22111 11223577899999999999999999999999999999999
Q ss_pred eEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCchhhhccCCCeEEEechHHHHHhhc
Q 020692 255 KVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQ 321 (322)
Q Consensus 255 ~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~~~~~~~~~k~~~~~va~~la~~i~ 321 (322)
+|+++||||+|++++.++|.+++ +++|++|||+|++.+. .++|++++|++++||++|+
T Consensus 231 ~I~~~~tH~v~~~~a~~~l~~~~-------~~~i~~t~tip~~~~~--~~~~~~~~sva~~la~~i~ 288 (304)
T PRK03092 231 DVIIAATHGVLSGPAAERLKNCG-------AREVVVTDTLPIPEEK--RFDKLTVLSIAPLLARAIR 288 (304)
T ss_pred eEEEEEEcccCChHHHHHHHHCC-------CCEEEEeeeeccchhh--cCCCeEEEEhHHHHHHHHH
Confidence 99999999999999999999997 8999999999997652 4789999999999999985
No 11
>PRK01259 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=5.7e-69 Score=509.68 Aligned_cols=286 Identities=28% Similarity=0.398 Sum_probs=257.6
Q ss_pred EEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCc--hhHHHHHHHHHHhhhc
Q 020692 17 VHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYALPRL 94 (322)
Q Consensus 17 ~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~--~~l~elll~~~a~~~~ 94 (322)
+.||+|+++++||++||+.|| .+++++++++|||||.++ +++++++|+||+|+||++.| |++||||+++++||++
T Consensus 1 ~~i~~~~~~~~la~~ia~~lg-~~~~~~~~~~FpdGE~~v--ri~~~v~g~~V~ii~s~~~~~nd~l~eLll~~~alr~~ 77 (309)
T PRK01259 1 MKLFAGNANPELAEKIAKYLG-IPLGKASVGRFSDGEISV--EINENVRGKDVFIIQSTCAPTNDNLMELLIMIDALKRA 77 (309)
T ss_pred CEEEECCCCHHHHHHHHHHhC-CceeeeEEEECCCCCEEE--EeCCCCCCCEEEEECCCCCCCcHHHHHHHHHHHHHHHc
Confidence 579999999999999999997 999999999999999555 55699999999999999765 6799999999999999
Q ss_pred CccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchHHHHHH
Q 020692 95 FVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQ 174 (322)
Q Consensus 95 ~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~~~la~ 174 (322)
|+++|++|+|||||+||||++++|||+++|.+|+||+. +|+|+|+++|+|+.+.++||+.|++++ .+.+++++
T Consensus 78 ga~~i~lViPYl~YsRQDr~~~~ge~isak~~a~lL~~-----~g~d~vitvD~H~~~~~~~f~~p~~~l--~~~~~l~~ 150 (309)
T PRK01259 78 SAGRITAVIPYFGYARQDRKARSRVPITAKLVANLLET-----AGADRVLTMDLHADQIQGFFDIPVDNL--YGSPILLE 150 (309)
T ss_pred CCceEEEEeeccccchhhhhhccCCCchHHHHHHHHhh-----cCCCEEEEEcCChHHHcCcCCCCceee--eecHHHHH
Confidence 99999999999999999999999999999999999996 489999999999999999999999887 68999999
Q ss_pred HHhcCCCCCCceEeccCCchHHHHHHHhccCCc----eEec---Cce-eeeeccCCCCCCeEEEEeccccChHhHHHHHH
Q 020692 175 RLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT----VREG---DKR-IVRIKEGNPAGCHVVIVDDLVQSGGTLIECQK 246 (322)
Q Consensus 175 ~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~~---~k~-~~~~~~~~v~g~~vlivDDii~TG~Tl~~~~~ 246 (322)
|+.+. +++++++|+||.||+.||+.+++.|+. .++. ... ......++++||+|+|||||++||+|+.++++
T Consensus 151 ~i~~~-~~~~~vvv~pd~Gg~~~A~~la~~Lg~~~~~~~k~r~~~~~~~~~~~~~~~~g~~vliVDDii~TG~T~~~a~~ 229 (309)
T PRK01259 151 DIKQK-NLENLVVVSPDVGGVVRARALAKRLDADLAIIDKRRPRANVSEVMNIIGDVEGRDCILVDDMIDTAGTLCKAAE 229 (309)
T ss_pred HHHhc-CCCCcEEEEECCCcHHHHHHHHHHhCCCEEEEEeecccceeEEEEeecccCCCCEEEEEecccCcHHHHHHHHH
Confidence 99764 467899999999999999999998876 1111 111 11234578999999999999999999999999
Q ss_pred HHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCchhhhccCCCeEEEechHHHHHhhc
Q 020692 247 VLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQ 321 (322)
Q Consensus 247 ~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~~~~~~~~~k~~~~~va~~la~~i~ 321 (322)
.|+++|+++|+++||||+|++++.++|.+++ +++|++|||+|++.+ ...++|++++||+++||++|+
T Consensus 230 ~l~~~Ga~~v~~~~tH~i~~~~a~~~l~~~~-------~~~iv~t~ti~~~~~-~~~~~k~~~isva~~ia~~i~ 296 (309)
T PRK01259 230 ALKERGAKSVYAYATHPVLSGGAIERIENSV-------IDELVVTDSIPLSEE-AKKCDKIRVLSVAPLLAEAIR 296 (309)
T ss_pred HHHccCCCEEEEEEEeeeCChHHHHHHhcCC-------CCEEEEecCcccchh-hccCCCeEEEEcHHHHHHHHH
Confidence 9999999999999999999999999999887 899999999999765 345789999999999999985
No 12
>KOG1448 consensus Ribose-phosphate pyrophosphokinase [Nucleotide transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-69 Score=495.80 Aligned_cols=288 Identities=29% Similarity=0.448 Sum_probs=263.9
Q ss_pred CcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCc--hhHHHHHHHHHHhh
Q 020692 15 KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYALP 92 (322)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~--~~l~elll~~~a~~ 92 (322)
+++++|+|++|++||++||++|| ++++++.|++|+|||++ |++.++|||+|||++||.++| |++||||.|++||+
T Consensus 2 ~~i~lf~g~shp~La~~I~~~lg-i~l~~v~~kkf~nge~~--v~i~esvR~~dV~iiqsgsg~ind~lmELLI~I~ac~ 78 (316)
T KOG1448|consen 2 KNIKLFSGDSHPELAERIAARLG-IELGKVNLKKFSNGETS--VQIGESVRGEDVYIIQSGSGPINDNLMELLIMINACK 78 (316)
T ss_pred CceEEEcCCCCHHHHHHHHHHhC-CCcceeeeEEccCCcEE--EecccccccCcEEEeccCCCcchHHHHHHHHHHHhcc
Confidence 67999999999999999999997 99999999999999955 566799999999999999998 89999999999999
Q ss_pred hcCccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchHHHH
Q 020692 93 RLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLL 172 (322)
Q Consensus 93 ~~~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~~~l 172 (322)
++++++||+|+|||||+||||+.+...+++||++|+|+.. +|+|++|++|+|..|.+|||.+||+++ .+.+.+
T Consensus 79 ~asa~~vTaViP~Fpyarq~~k~~~r~~i~aklVanlls~-----aG~dhvItmDlHa~Q~qgfF~ipVdnl--y~~p~~ 151 (316)
T KOG1448|consen 79 RASASRVTAVIPYFPYARQDKKDKSRAPILAKLVANLLSS-----AGADHVITMDLHASQIQGFFDIPVDNL--YAEPAV 151 (316)
T ss_pred hhhhheeEEeccCCccccchhhhhhhhhHHHHHHHhhhhc-----cCCceEEEecccchhhCceeeccchhh--ccchHH
Confidence 9999999999999999999999888999999999999985 589999999999999999999999998 588899
Q ss_pred HHHHhcC-CCCCCceEeccCCchHHHHHHHhccCCc-----eEecCce----eeeeccCCCCCCeEEEEeccccChHhHH
Q 020692 173 KQRLHQL-PDANNIVIAFPDDGAWKRFHKMLDHFPT-----VREGDKR----IVRIKEGNPAGCHVVIVDDLVQSGGTLI 242 (322)
Q Consensus 173 a~~l~~~-~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~-----~r~~~k~----~~~~~~~~v~g~~vlivDDii~TG~Tl~ 242 (322)
..|++.. .+.++.++|+||.||++|+..+++.|+. .+.+++. ....+.||++||.++|||||++|+||+.
T Consensus 152 l~~ir~~~~~~~~~vivSPdaGgaKR~~s~ad~l~~~fali~ker~k~~~v~~~m~LVGDv~gkvailVDDm~dt~GTl~ 231 (316)
T KOG1448|consen 152 LNYIRENIPDSENAVIVSPDAGGAKRVTSLADRLNLDFALIHKERRKANEVDIRMVLVGDVKGKVAILVDDMADTCGTLI 231 (316)
T ss_pred HHHHHhhCCCccceEEECCCcchhhhhHHHHHhhcchhhhhhhhhhcccccceEEEEEeccCCcEEEEecccccccchHH
Confidence 9999873 4678999999999999999999998876 2222332 2345799999999999999999999999
Q ss_pred HHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCchhhhccCCCeEEEechHHHHHhhc
Q 020692 243 ECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQ 321 (322)
Q Consensus 243 ~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~~~~~~~~~k~~~~~va~~la~~i~ 321 (322)
++++.|.+.||++|++++|||+|++++++++.++. ++++++|||+|.+.+.. .+++.++|+++.+||+|+
T Consensus 232 ~aa~~L~~~GA~kV~a~~THgVfs~~a~er~~~s~-------~~~~vvtnt~p~~~~~~--~~~~~~Idvs~~~ae~ir 301 (316)
T KOG1448|consen 232 KAADKLLEHGAKKVYAIVTHGVFSGPAIERLNESA-------LDRVVVTNTIPIDDSCL--EPKLTTIDVSPVLAEAIR 301 (316)
T ss_pred HHHHHHHhcCCceEEEEEcceeccccHHHHhhhcc-------cceEEEEEeeccccccc--CCcccEEeeccccchheE
Confidence 99999999999999999999999999999999985 89999999999976532 378999999999999986
No 13
>PRK00934 ribose-phosphate pyrophosphokinase; Provisional
Probab=100.00 E-value=7.3e-68 Score=497.47 Aligned_cols=275 Identities=23% Similarity=0.303 Sum_probs=247.0
Q ss_pred EEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCc-hhHHHHHHHHHHhhhcCc
Q 020692 18 HLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPRLFV 96 (322)
Q Consensus 18 ~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~-~~l~elll~~~a~~~~~a 96 (322)
++|+|++|++||++||+.|| ++++++++++|||||.++++ +++++|+||||+|++.++ |++||||+++++||++|+
T Consensus 1 ~i~~~~~~~~la~~ia~~l~-~~~~~~~~~~FpdGE~~v~i--~~~v~g~~v~i~~~~~~~~d~l~ell~~~~alr~~ga 77 (285)
T PRK00934 1 MIIGGSASQLLASEVARLLN-TELALVETKRFPDGELYVRI--LGEIDGEDVVIISTTYPQDENLVELLLLIDALRDEGA 77 (285)
T ss_pred CeEeCCCCHHHHHHHHHHHC-CceEeeEEEECCCCCEEEEE--CCCcCCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC
Confidence 37999999999999999997 99999999999999966555 689999999999998876 459999999999999999
Q ss_pred cceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchHHHHHHHH
Q 020692 97 ASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRL 176 (322)
Q Consensus 97 ~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~~~la~~l 176 (322)
++|++|+|||||+||||++++|||+++|++|+||+.+ + |+|+++|+|+.+.++||+.|++++ ++.+.++++|
T Consensus 78 ~~i~~v~PY~~YaRqDr~~~~ge~isak~~a~ll~~~-----~-d~vitvD~H~~~~~~~f~~~~~~l--~a~~~la~~i 149 (285)
T PRK00934 78 KSITLVIPYLGYARQDKRFKPGEPISARAIAKIISAY-----Y-DRIITINIHEPSILEFFPIPFINL--DAAPLIAEYI 149 (285)
T ss_pred CeEEEEecCCcccccccccCCCCCccHHHHHHHHHHh-----c-CEEEEEcCChHHHcCcCCCcEeEe--ecHHHHHHHH
Confidence 9999999999999999999999999999999999964 5 999999999999999999999887 6899999999
Q ss_pred hcCCCCCCceEeccCCchHHHHHHHhccCCc----eEe---cCce-eeeeccCCCCCCeEEEEeccccChHhHHHHHHHH
Q 020692 177 HQLPDANNIVIAFPDDGAWKRFHKMLDHFPT----VRE---GDKR-IVRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVL 248 (322)
Q Consensus 177 ~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~---~~k~-~~~~~~~~v~g~~vlivDDii~TG~Tl~~~~~~L 248 (322)
.+ +.+++++|+||.|+.+||..+++.++. .++ .... ......++++||+|+|||||++||+|+.++++.|
T Consensus 150 ~~--~~~~~vvv~pd~Ga~~~a~~lA~~l~~~~~~i~k~r~~~~~~~~~~~~~~v~Gk~VlIVDDIi~TG~Tl~~aa~~L 227 (285)
T PRK00934 150 GD--KLDDPLVLAPDKGALELAKEAAEILGCEYDYLEKTRISPTEVEIAPKNLDVKGKDVLIVDDIISTGGTMATAIKIL 227 (285)
T ss_pred Hh--cCCCCEEEEeCCchHHHHHHHHHHhCCCEEEEEEEecCCCeEEEeccccccCCCEEEEEcCccccHHHHHHHHHHH
Confidence 65 356789999999999999999998876 121 1111 1122345789999999999999999999999999
Q ss_pred HHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCchhhhccCCCeEEEechHHHHHhhc
Q 020692 249 AAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQ 321 (322)
Q Consensus 249 ~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~~~~~~~~~k~~~~~va~~la~~i~ 321 (322)
+++||++|+++|+||+|++++.++|.+++ +++|+||||+|+ ++.++|++++||++|+
T Consensus 228 k~~GA~~V~~~~~H~i~~~~a~~~l~~~~-------i~~i~~tnti~~---------~~~~~~va~~la~~i~ 284 (285)
T PRK00934 228 KEQGAKKVYVACVHPVLVGDAILKLYNAG-------VDEIIVTDTLES---------EVSKISVAPLIADLLK 284 (285)
T ss_pred HHCCCCEEEEEEEeeccCcHHHHHHHhCC-------CCEEEEcCCCCC---------CceEEEcHHHHHHHHh
Confidence 99999999999999999999999999998 899999999985 4678999999999986
No 14
>PRK06827 phosphoribosylpyrophosphate synthetase; Provisional
Probab=100.00 E-value=1.7e-67 Score=509.30 Aligned_cols=293 Identities=20% Similarity=0.256 Sum_probs=252.2
Q ss_pred CCCcEEEEecCCCHHHHHHHHHHc---------------C----Ccc--eeeeeEeeeCCCceeEEeccCCCCCCCeEEE
Q 020692 13 QKKQVHLFYCVECEELARKVAAQS---------------D----LIT--LQSINWRNFADGWPNLYINSAHDIRGQHVAF 71 (322)
Q Consensus 13 ~~~~~~i~~g~~~~~la~~ia~~l---------------g----~~~--~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~i 71 (322)
..+++.||+|+++++||++||+.| | +.+ ++++++++|||||.++ +++++|||+||||
T Consensus 5 ~~~~~~i~~~~~~~~la~~ia~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~FpDGE~~v--ri~~~Vrg~dV~i 82 (382)
T PRK06827 5 PVGSLGIIALPSCRELADKVDEHLVRIRERKENENIESLAFKGYSRESYLIPAKFIRFSNGEAKG--EILESVRGKDIYI 82 (382)
T ss_pred CCCceEEEECCCCHHHHHHHHHHHHHhhhhccccccccccccccCCcceeeeeEEEECCCCCEEE--EECCCCCCCeEEE
Confidence 456899999999999999999999 3 354 9999999999999555 5569999999999
Q ss_pred EEecC---------------C-chhHHHHHHHHHHhhhcCccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCC
Q 020692 72 LASFS---------------S-PGVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPT 135 (322)
Q Consensus 72 v~s~~---------------~-~~~l~elll~~~a~~~~~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~ 135 (322)
+||++ + +|++||||++++||| +||++|++|+|||||+||||+ ++|+|+++|.+|+||+.
T Consensus 83 vqs~~~~~v~~~~~~~~~~~p~nd~lmeLll~idalr-agA~rIt~ViPY~~YaRQDr~-~~~e~itak~vA~lL~~--- 157 (382)
T PRK06827 83 LQDVGNYSVTYNMFGEKNHMSPDDHFQDLKRTIDAIR-GKARRITVIMPFLYESRQHKR-KGRESLDCALALQELEE--- 157 (382)
T ss_pred EecCCcccccccccccccCCCCcHHHHHHHHHHHHHh-cCCCeEEEEeecccccccccc-cCCCCccHHHHHHHHHH---
Confidence 99996 3 368999999999999 999999999999999999999 78999999999999996
Q ss_pred CCCCCcEEEEecCChhhhhcccC-CCCCccccchHHHHHHHHhcCC-----CCCCceEeccCCchHHHHHHHhccCCc--
Q 020692 136 SRGGPTSLVIYDIHALQERFYFS-DHVLPLFETGIPLLKQRLHQLP-----DANNIVIAFPDDGAWKRFHKMLDHFPT-- 207 (322)
Q Consensus 136 ~~~g~d~Ii~VdlHs~~~~g~f~-~~v~~l~~~~~~~la~~l~~~~-----~~~~~vvV~Pd~Ga~~ra~~~a~~L~~-- 207 (322)
+|+|+|+++|+|+.+.+|||+ .|++++ .+.+.+++|+.+.. +.++++||+||.||++||+.+++.|+.
T Consensus 158 --~G~d~vitvDlHs~~i~~~F~~~pvdnl--~a~~~l~~~i~~~i~~l~~d~~~~VVVsPD~Gg~~rA~~~A~~Lg~~~ 233 (382)
T PRK06827 158 --LGVDNIITFDAHDPRIENAIPLMGFENL--YPSYQIIKALLKNEKDLEIDKDHLMVISPDTGAMDRAKYYASVLGVDL 233 (382)
T ss_pred --cCCCeEEEecCChHHhcccCCCCCcCCc--CchHHHHHHHHHhcccccccCCCcEEEEECccchHHHHHHHHHhCCCE
Confidence 489999999999999999998 478887 68889999996531 126889999999999999999998876
Q ss_pred --e---EecCc------e-eeeeccC-CCCCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHh
Q 020692 208 --V---REGDK------R-IVRIKEG-NPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFT 274 (322)
Q Consensus 208 --~---r~~~k------~-~~~~~~~-~v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~ 274 (322)
. |.... . ......+ +++||+|+|||||++||+|+.++++.|+++||++|+++||||+|+ +|+++|.
T Consensus 234 ai~~K~R~~~~~~~g~~~~~~~~~~g~dV~gr~vIIVDDII~TG~Tl~~aa~~Lk~~GA~~V~~~~tH~vf~-~a~~~l~ 312 (382)
T PRK06827 234 GLFYKRRDYSRVVNGRNPIVAHEFLGRDVEGKDVLIVDDMIASGGSMIDAAKELKSRGAKKIIVAATFGFFT-NGLEKFD 312 (382)
T ss_pred EEEEcccCCcccccCCCceEEEecCCcccCCCEEEEEeCCcCcHHHHHHHHHHHHHcCCCEEEEEEEeecCh-HHHHHHH
Confidence 1 21111 0 1112346 899999999999999999999999999999999999999999999 9999998
Q ss_pred cccCCCccCCcCEEEEecCCcCchhhhccCCCeEEEechHHHHHhhc
Q 020692 275 LKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQ 321 (322)
Q Consensus 275 ~s~~~g~~~~~~~iv~Tdti~~~~~~~~~~~k~~~~~va~~la~~i~ 321 (322)
++..+|. +++|++|||+|++.+. ..++|++++|||++||++|+
T Consensus 313 ~~~~~g~---i~~iv~TdTi~~~~~~-~~~~~~~~isva~llA~~I~ 355 (382)
T PRK06827 313 KAYEEGY---FDRIIGTNLVYHPEEL-LSKPWYIEVDMSKLIARIID 355 (382)
T ss_pred hhcccCC---CCEEEEeCCCcCchhh-cccCCeEEEEcHHHHHHHHH
Confidence 7632222 8999999999997642 24689999999999999985
No 15
>PLN02369 ribose-phosphate pyrophosphokinase
Probab=100.00 E-value=3.2e-66 Score=489.30 Aligned_cols=276 Identities=25% Similarity=0.376 Sum_probs=246.4
Q ss_pred HHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCc--hhHHHHHHHHHHhhhcCccceEEeec
Q 020692 27 ELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYALPRLFVASFTLVLP 104 (322)
Q Consensus 27 ~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~--~~l~elll~~~a~~~~~a~~i~~viP 104 (322)
+||++||+.|| ++++++++++|||||.++ ++.++++|+||||+||+++| |++||||++++|||++|+++|++|+|
T Consensus 2 ~lA~~ia~~lg-~~l~~~~~~~FpdGE~~v--~i~~~v~g~~V~iv~s~~~p~nd~l~eLl~~~~a~r~~~a~~i~~ViP 78 (302)
T PLN02369 2 ALSQEIACYLG-LELGKITIKRFADGEIYV--QLQESVRGCDVFLVQPTCPPANENLMELLIMIDACRRASAKRITAVIP 78 (302)
T ss_pred hHHHHHHHHhC-CceeeeEEEECCCCCEEE--EECCCCCCCeEEEEecCCCCcchHHHHHHHHHHHHHHcCCCeEEEEee
Confidence 69999999997 999999999999999665 55699999999999999866 68999999999999999999999999
Q ss_pred cCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchHHHHHHHHhcC-CCCC
Q 020692 105 FFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQL-PDAN 183 (322)
Q Consensus 105 Y~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~~~la~~l~~~-~~~~ 183 (322)
||||+||||++++|||+++|.+|+||+. +|+|+|+++|+|+.+.++||+.|++++ ++.+.+++||.+. ...+
T Consensus 79 Yl~YsRQDr~~~~~e~isak~va~lL~~-----~g~d~vi~vDlHs~~i~~~F~ip~~~l--~~~~~~~~~i~~~~~~~~ 151 (302)
T PLN02369 79 YFGYARADRKTQGRESIAAKLVANLITE-----AGADRVLACDLHSGQSMGYFDIPVDHV--YGQPVILDYLASKTISSP 151 (302)
T ss_pred cccccccccccCCCCCchHHHHHHHHHh-----cCCCEEEEEECCchHHhhccCCceecc--cchHHHHHHHHHhCCCCC
Confidence 9999999999999999999999999996 489999999999999999999999987 6889999999664 2236
Q ss_pred CceEeccCCchHHHHHHHhccCC-c----e---EecCcee-eeeccCCCCCCeEEEEeccccChHhHHHHHHHHHHcCCC
Q 020692 184 NIVIAFPDDGAWKRFHKMLDHFP-T----V---REGDKRI-VRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAA 254 (322)
Q Consensus 184 ~~vvV~Pd~Ga~~ra~~~a~~L~-~----~---r~~~k~~-~~~~~~~v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~ 254 (322)
++++|+||.||++|+..+++.++ . . |.+.... .....++++||+|+|||||++||+|+.++++.|++.|++
T Consensus 152 ~~vvVspd~gg~~~a~~~a~~l~~~~~~~l~k~R~~~~~~~~~~~~~~v~g~~viivDDii~TG~Tl~~a~~~l~~~Ga~ 231 (302)
T PLN02369 152 DLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRQGHNVAEVMNLIGDVKGKVAIMVDDMIDTAGTITKGAALLHQEGAR 231 (302)
T ss_pred ceEEEEECcChHHHHHHHHHHcCCCCEEEEEEecCCcceeeeEecCCCCCCCEEEEEcCcccchHHHHHHHHHHHhCCCC
Confidence 78999999999999999998873 3 1 2221111 123567899999999999999999999999999999999
Q ss_pred eEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCchhhhccCCCeEEEechHHHHHhhc
Q 020692 255 KVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQ 321 (322)
Q Consensus 255 ~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~~~~~~~~~k~~~~~va~~la~~i~ 321 (322)
+|++++|||+|++++.++|.+++ +++|++|||+|++.. ...+|++++||+++||++|+
T Consensus 232 ~v~~~~tH~v~~~~a~~~l~~~~-------~~~iv~t~ti~~~~~--~~~~~~~~~~v~~~la~~i~ 289 (302)
T PLN02369 232 EVYACATHAVFSPPAIERLSSGL-------FQEVIVTNTIPVSEK--NYFPQLTVLSVANLLGETIW 289 (302)
T ss_pred EEEEEEEeeeeCHHHHHHHHhCC-------CCEEEEeCCCCChhh--cccCCceEEEHHHHHHHHHH
Confidence 99999999999999999999987 899999999998754 24679999999999999985
No 16
>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase. In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason.
Probab=100.00 E-value=2.4e-65 Score=485.37 Aligned_cols=283 Identities=29% Similarity=0.419 Sum_probs=255.1
Q ss_pred EEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEE-EecCCc--hhHHHHHHHHHHhhh
Q 020692 17 VHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFL-ASFSSP--GVIFEQISVIYALPR 93 (322)
Q Consensus 17 ~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv-~s~~~~--~~l~elll~~~a~~~ 93 (322)
+.||+|+++++||++||+.|| .+++++++++|||||.++ ++.++++|+||+|+ ||+++| +++|||+++++|||+
T Consensus 1 ~~i~~~~~~~~la~~ia~~lg-~~~~~~~~~~FpdGE~~v--~i~~~v~g~~v~iv~~s~~~~~~~~l~el~~~~~a~r~ 77 (308)
T TIGR01251 1 MKIFSGSSNQELAQKVAKNLG-LPLGDVEVKRFPDGELYV--RINESVRGKDVFIIQQSTSAPVNDNLMELLIMIDALKR 77 (308)
T ss_pred CEEEECCCCHHHHHHHHHHhC-CeeeeeEEEECCCCCEEE--EECCCCCCCeEEEEeCCCCCCccHHHHHHHHHHHHHHH
Confidence 478999999999999999997 999999999999999555 55699999999999 999864 679999999999999
Q ss_pred cCccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchHHHHH
Q 020692 94 LFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLK 173 (322)
Q Consensus 94 ~~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~~~la 173 (322)
+|+++|++|+|||||+||||++++||++++|.+|+||+. +|+|+++++|+|+.+.++||+.|++++ .+.+.++
T Consensus 78 ~ga~~i~~v~PYl~Y~RqDr~~~~ge~is~~~~a~ll~~-----~g~d~vit~DlHs~~~~~~f~ip~~~l--~a~~~l~ 150 (308)
T TIGR01251 78 ASAKSITAVIPYYGYARQDKKFKSREPISAKLVANLLET-----AGADRVLTVDLHSPQIQGFFDVPVDNL--YASPVLA 150 (308)
T ss_pred cCCCeEEEEEEecccchhccccCCCCCchHHHHHHHHHH-----cCCCEEEEecCChHHhcCcCCCceecc--cCHHHHH
Confidence 999999999999999999999999999999999999996 489999999999999999999999887 6889999
Q ss_pred HHHhcCCCCCCceEeccCCchHHHHHHHhccCCc----e---Ee-cC-ceeeeeccCCCCCCeEEEEeccccChHhHHHH
Q 020692 174 QRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT----V---RE-GD-KRIVRIKEGNPAGCHVVIVDDLVQSGGTLIEC 244 (322)
Q Consensus 174 ~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~---r~-~~-k~~~~~~~~~v~g~~vlivDDii~TG~Tl~~~ 244 (322)
+|+.+.. .+++++|+||.|+++||..+++.|+. . |. .+ ........++++||+|+||||+++||+|+..+
T Consensus 151 ~~i~~~~-~~~~viv~pd~g~~~~A~~lA~~Lg~~~~~i~k~r~~~~~~~~~~~~~~~v~g~~vliVDDii~tG~Tl~~a 229 (308)
T TIGR01251 151 EYLKKKI-LDNPVVVSPDAGGVERAKKVADALGCPLAIIDKRRISATNEVEVMNLVGDVEGKDVVIVDDIIDTGGTIAKA 229 (308)
T ss_pred HHHHhhC-CCCCEEEEECCchHHHHHHHHHHhCCCEEEEEEEecCCCCEEEEEecccccCCCEEEEEccccCCHHHHHHH
Confidence 9997752 57889999999999999999998876 1 22 11 11122346789999999999999999999999
Q ss_pred HHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCchhhhccCCCeEEEechHHHHHhhc
Q 020692 245 QKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIADALQ 321 (322)
Q Consensus 245 ~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~~~~~~~~~k~~~~~va~~la~~i~ 321 (322)
++.|++.||++|+++++|++|++++.++|.+++ +++|++|||+|+. ...+|+..+|++++||++|+
T Consensus 230 ~~~l~~~ga~~v~~~~th~v~~~~a~~~l~~~~-------~~~iv~tdt~~~~----~~~~~~~~v~va~~la~~i~ 295 (308)
T TIGR01251 230 AEILKSAGAKRVIAAATHGVFSGPAIERIANAG-------VEEVIVTNTIPHE----KHKPKVSVISVAPLIAEAIR 295 (308)
T ss_pred HHHHHhcCCCEEEEEEEeeecCcHHHHHHHhCC-------CCEEEEeCCCCcc----ccCCCcEEEEhHHHHHHHHH
Confidence 999999999999999999999999999999997 8999999999985 24679999999999999985
No 17
>KOG1503 consensus Phosphoribosylpyrophosphate synthetase-associated protein [Amino acid transport and metabolism; Nucleotide transport and metabolism]
Probab=100.00 E-value=5.6e-57 Score=401.13 Aligned_cols=290 Identities=21% Similarity=0.307 Sum_probs=261.0
Q ss_pred CCCcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCc--hhHHHHHHHHHH
Q 020692 13 QKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYA 90 (322)
Q Consensus 13 ~~~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~--~~l~elll~~~a 90 (322)
.++++.+|+|+|+++||+.|+++|| +++++..+.+-+|+| .+|++.++|||+||||+|+.+.+ +++||||.|+.|
T Consensus 5 a~sg~vl~s~ns~~elak~vaerlg-i~~g~~~vy~~tnre--t~vei~~svrgkdvfiiqt~skdvn~~vmellim~ya 81 (354)
T KOG1503|consen 5 ASSGMVLFSGNSHPELAKMVAERLG-IELGKATVYQKTNRE--TRVEIKESVRGKDVFIIQTGSKDVNNDVMELLIMAYA 81 (354)
T ss_pred ccCCeEEEcCCCCHHHHHHHHHHhc-ccccceEEEecCCCc--eEEEhhhhccCceEEEEEecCcccchHHHHHHHHHHH
Confidence 4689999999999999999999997 999999999999998 45566799999999999999875 689999999999
Q ss_pred hhhcCccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchHH
Q 020692 91 LPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIP 170 (322)
Q Consensus 91 ~~~~~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~~ 170 (322)
|+.+.+++|+.|+|||||++|.++.+ +.++-.|++|.||.. +|..++|++|+|...++|||+.||+|+ .+++
T Consensus 82 ckts~aksiigvipy~pyskqckmrk-rgsiv~klla~mmck-----aglthlitmdlhqkeiqgff~~pvdnl--rasp 153 (354)
T KOG1503|consen 82 CKTSCAKSIIGVIPYLPYSKQCKMRK-RGSIVSKLLASMMCK-----AGLTHLITMDLHQKEIQGFFSIPVDNL--RASP 153 (354)
T ss_pred HhhhhhhceEEEeecCccchhhhhhh-cccHHHHHHHHHHHh-----cccceEEeehhhhHhhcceeccccccc--ccCH
Confidence 99999999999999999999998877 667889999999984 689999999999999999999999998 7899
Q ss_pred HHHHHHhcC-CCCCCceEeccCCchHHHHHHHhccCCc---eEecCc----------e-------e-------------e
Q 020692 171 LLKQRLHQL-PDANNIVIAFPDDGAWKRFHKMLDHFPT---VREGDK----------R-------I-------------V 216 (322)
Q Consensus 171 ~la~~l~~~-~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~---~r~~~k----------~-------~-------------~ 216 (322)
.|.+||.+. .+++|.++|+-..|..++|..+++.|.. +.+++. + . .
T Consensus 154 fllqyiqe~ipdyrnavivaksp~~akka~syaerlrlglavihge~k~~e~d~~dgr~spp~~~~~t~~~~~~lp~~~~ 233 (354)
T KOG1503|consen 154 FLLQYIQEEIPDYRNAVIVAKSPGVAKKAQSYAERLRLGLAVIHGEQKDTESDLVDGRHSPPPVVTATTHPSLELPAQIS 233 (354)
T ss_pred HHHHHHHHhCccccceEEEecCcchhhHHHhHHHHHhhceeEeeccccccccccccCCcCCCCccccccCccccCchhhc
Confidence 999999874 4688999999999999999999986644 222210 0 0 0
Q ss_pred --e---eccCCCCCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEe
Q 020692 217 --R---IKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWIT 291 (322)
Q Consensus 217 --~---~~~~~v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~T 291 (322)
+ ...||+.||..++|||+++.-.++.+|++.||+.||-+||+++|||++|.+|...|++|+ ||+|++|
T Consensus 234 k~kppltvvgdvggriaimvddiiddvqsfvaaae~lkergaykiyv~athgllssdapr~lees~-------idevvvt 306 (354)
T KOG1503|consen 234 KEKPPLTVVGDVGGRIAIMVDDIIDDVQSFVAAAEVLKERGAYKIYVMATHGLLSSDAPRLLEESP-------IDEVVVT 306 (354)
T ss_pred ccCCCeEEEeccCceEEEEehhhHHhHHHHHHHHHHHHhcCceEEEEEeecccccccchhhhhcCC-------CceEEEe
Confidence 0 236899999999999999999999999999999999999999999999999999999998 8999999
Q ss_pred cCCcCchhhhccCCCeEEEechHHHHHhhc
Q 020692 292 DSCPLTVKAIANKAPFEVLSLAGSIADALQ 321 (322)
Q Consensus 292 dti~~~~~~~~~~~k~~~~~va~~la~~i~ 321 (322)
||+||+.++ .+|+|++.+|++-+|+|+||
T Consensus 307 ntvphevqk-lqc~kiktvdislii~eair 335 (354)
T KOG1503|consen 307 NTVPHEVQK-LQCHKIKTVDISLIISEAIR 335 (354)
T ss_pred cCCcHHHHh-hcCCccceeehhhHHHHHHH
Confidence 999998765 47999999999999999996
No 18
>PF13793 Pribosyltran_N: N-terminal domain of ribose phosphate pyrophosphokinase; PDB: 2JI4_A 1DKU_B 1IBS_B 1DKR_B 3MBI_C 3LRT_B 3LPN_B 3NAG_B 2H07_B 2H06_B ....
Probab=100.00 E-value=4.2e-36 Score=246.29 Aligned_cols=112 Identities=28% Similarity=0.449 Sum_probs=94.5
Q ss_pred EEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCc--hhHHHHHHHHHHhhhc
Q 020692 17 VHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP--GVIFEQISVIYALPRL 94 (322)
Q Consensus 17 ~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~--~~l~elll~~~a~~~~ 94 (322)
|+||+|+++++||++||+.|| .+++++++++|||||.++ +++++++|+||||+||+++| |++||||++++|||++
T Consensus 1 m~I~~g~~~~~La~~ia~~L~-~~~~~~~~~~F~dGE~~v--~i~~~v~g~dv~iiqs~~~~~nd~lmeLll~i~a~r~~ 77 (116)
T PF13793_consen 1 MVIFSGSSSQDLAERIAEALG-IPLGKVETKRFPDGETYV--RIPESVRGKDVFIIQSTSPPVNDNLMELLLLIDALRRA 77 (116)
T ss_dssp EEEEESSSGHHHHHHHHHHTT-S-EE-EEEEE-TTS-EEE--EESS--TTSEEEEE---SSSHHHHHHHHHHHHHHHHHT
T ss_pred CEEEECCCCHHHHHHHHHHhC-CceeeeEEEEcCCCCEEE--EecccccCCceEEEEecCCchhHHHHHHHHHHHHHHHc
Confidence 689999999999999999997 999999999999998655 55699999999999999987 7899999999999999
Q ss_pred CccceEEeeccCCCCccchhccCCCcccHHHHHHHHhc
Q 020692 95 FVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSN 132 (322)
Q Consensus 95 ~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~ 132 (322)
||++|++|+|||||+||||+ ++|||+++|.+|+||+.
T Consensus 78 ~a~~i~~ViPYl~YaRQDr~-~~ge~isak~~a~lL~~ 114 (116)
T PF13793_consen 78 GAKRITLVIPYLPYARQDRR-KPGEPISAKVVAKLLSA 114 (116)
T ss_dssp TBSEEEEEESS-TTTTSSSS-STTC--HHHHHHHHHHH
T ss_pred CCcEEEEeccchhhhhhccC-CCCCcchHHHHHHHHHh
Confidence 99999999999999999999 89999999999999985
No 19
>PF14572 Pribosyl_synth: Phosphoribosyl synthetase-associated domain; PDB: 2H07_B 2H06_B 3S5J_B 2HCR_A 3EFH_A 2H08_A 1DKR_B 1DKU_B 1IBS_B 2JI4_A ....
Probab=99.97 E-value=5.9e-32 Score=235.99 Aligned_cols=132 Identities=31% Similarity=0.436 Sum_probs=104.0
Q ss_pred CCCceEeccCCchHHHHHHHhccCCc---eEecC----------ce-----------e--------------eeeccCCC
Q 020692 182 ANNIVIAFPDDGAWKRFHKMLDHFPT---VREGD----------KR-----------I--------------VRIKEGNP 223 (322)
Q Consensus 182 ~~~~vvV~Pd~Ga~~ra~~~a~~L~~---~r~~~----------k~-----------~--------------~~~~~~~v 223 (322)
++|.|||+||.|+.+||..+|+.|+. +.+++ .+ . ...+.|||
T Consensus 2 y~naVIVa~~~g~akRAts~Ad~L~l~~avih~e~~~~~~~~~~~~~s~p~~~~~~~~~~~~~~~~~~~e~~~~~vVGDV 81 (184)
T PF14572_consen 2 YRNAVIVAKDPGGAKRATSFADRLRLGFAVIHGERRDSESDGVDGRHSPPMSRSAAVSSSEEIPEMTPKEKPPMNVVGDV 81 (184)
T ss_dssp GGGEEEEESSGGGHHHHHHHHHHCT-EEEEE------------------------------------------EEEES--
T ss_pred CCCCEEEeCCCCchHhHHHHHHHhCCCeeEecCccccccccccccccCCCccccccccccchhhhcccCcccceEEEEEc
Confidence 57899999999999999999998876 11100 00 0 01247999
Q ss_pred CCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCchhhhcc
Q 020692 224 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIAN 303 (322)
Q Consensus 224 ~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~~~~~~~ 303 (322)
+||+|+|||||++||+|+.++++.||++||++|++++|||+|+++|.++|+++. |++||||||||++.+. .+
T Consensus 82 ~gk~~IIvDDiIdtg~Tl~~aA~~Lk~~GA~~V~~~aTHgvfs~~A~~~l~~s~-------Id~vvvTnTIp~~~~~-~~ 153 (184)
T PF14572_consen 82 KGKICIIVDDIIDTGGTLIKAAELLKERGAKKVYACATHGVFSGDAPERLEESP-------IDEVVVTNTIPQEEQK-LQ 153 (184)
T ss_dssp TTSEEEEEEEEESSTHHHHHHHHHHHHTTESEEEEEEEEE---TTHHHHHHHSS-------ESEEEEETTS--HHHH-HH
T ss_pred cCCeEeeecccccchHHHHHHHHHHHHcCCCEEEEEEeCcccCchHHHHHhhcC-------CeEEEEeccccCchhh-hc
Confidence 999999999999999999999999999999999999999999999999999997 9999999999997643 36
Q ss_pred CCCeEEEechHHHHHhhc
Q 020692 304 KAPFEVLSLAGSIADALQ 321 (322)
Q Consensus 304 ~~k~~~~~va~~la~~i~ 321 (322)
++|++++||+++|||+|+
T Consensus 154 ~~Ki~vldis~llaeaI~ 171 (184)
T PF14572_consen 154 CPKIKVLDISPLLAEAIR 171 (184)
T ss_dssp -TTEEEE--HHHHHHHHH
T ss_pred CCCEeEeehHHHHHHHHH
Confidence 899999999999999995
No 20
>PRK13811 orotate phosphoribosyltransferase; Provisional
Probab=99.62 E-value=6.6e-15 Score=128.70 Aligned_cols=146 Identities=16% Similarity=0.091 Sum_probs=106.2
Q ss_pred HHHHHHHhcCCCCCCCCcEEEEecCChhhhhccc-CCCCCccccchHHHHHHHHhcCCCCCCceEeccCCchHHHHHHHh
Q 020692 124 FTMARILSNIPTSRGGPTSLVIYDIHALQERFYF-SDHVLPLFETGIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKML 202 (322)
Q Consensus 124 k~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f-~~~v~~l~~~~~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a 202 (322)
..++++|.. .|++++-.+++||.+.++|| +.+...........+++.+.+. .+.++|++|+.||+++|..++
T Consensus 3 ~~~~~~l~~-----~ga~~~g~f~L~SG~~s~~y~d~~~l~~~p~~~~~l~~~l~~~--~~~d~Vvg~~~gGi~~A~~~a 75 (170)
T PRK13811 3 NTIAELLIS-----YKAIEFGDFTLASGAKSRYYIDIKTAITHPALLKEIAAEVAKR--YDFDVVAGVAVGGVPLAVAVS 75 (170)
T ss_pred HHHHHHHHH-----CCCEEECCEEEccCCcCCEEEeCchhccCHHHHHHHHHHHHhh--CCCCEEEecCcCcHHHHHHHH
Confidence 457788875 37889999999999998887 4322111111234455555432 355699999999999999999
Q ss_pred ccCCc----eEecCcee--eeeccCCCCCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcc
Q 020692 203 DHFPT----VREGDKRI--VRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLK 276 (322)
Q Consensus 203 ~~L~~----~r~~~k~~--~~~~~~~v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s 276 (322)
..++. .|+..+.. .....++++|++|+||||+++||+|+.++++.|++.||+-+.++|.-..- .++.++|++.
T Consensus 76 ~~l~~p~~~~rK~~k~~g~~~~~~g~~~g~~VlIVDDvi~TG~T~~~~~~~l~~~Ga~v~~~~~~vdr~-~g~~~~l~~~ 154 (170)
T PRK13811 76 LAAGKPYAIIRKEAKDHGKAGLIIGDVKGKRVLLVEDVTTSGGSALYGIEQLRAAGAVVDDVVTVVDRE-QGAEELLAEL 154 (170)
T ss_pred HHHCCCEEEEecCCCCCCCcceEEcccCCCEEEEEEecccccHHHHHHHHHHHHCCCeEEEEEEEEECC-ccHHHHHHhc
Confidence 88876 34432221 12345678999999999999999999999999999999998888865543 3567777766
Q ss_pred c
Q 020692 277 N 277 (322)
Q Consensus 277 ~ 277 (322)
+
T Consensus 155 g 155 (170)
T PRK13811 155 G 155 (170)
T ss_pred C
Confidence 5
No 21
>PRK11595 DNA utilization protein GntX; Provisional
Probab=99.55 E-value=5.4e-15 Score=134.93 Aligned_cols=159 Identities=22% Similarity=0.182 Sum_probs=108.4
Q ss_pred HHHHhhhc--CccceEEeeccCCCCccc-hhccC-CCcccHHHHHHHHhcCC------CCCCCCcEEEEecCChhh--hh
Q 020692 87 VIYALPRL--FVASFTLVLPFFPTGSFE-RMEEE-GDVATAFTMARILSNIP------TSRGGPTSLVIYDIHALQ--ER 154 (322)
Q Consensus 87 ~~~a~~~~--~a~~i~~viPY~~YsRqd-r~~~~-ge~~sak~~a~lL~~~~------~~~~g~d~Ii~VdlHs~~--~~ 154 (322)
+|..|.+. .+.+..++.+|-+..|+- ..+|. |+.-.++.++++|.... .....+|.|++||+|..+ .|
T Consensus 50 ~C~~C~~~~~~~~~~~a~~~Y~g~~r~lI~~~Ky~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~d~ivpVPl~~~r~~~R 129 (227)
T PRK11595 50 PCGRCLQKPPPWQRLVFVSDYAPPLSGLIHQLKFSRRSELASVLARLLLLEWLQARRSTGLQKPDRIISVPLHQRRHWRR 129 (227)
T ss_pred CcHHHHcCCCchhheeeeeecccHHHHHHHHHHHCccHHHHHHHHHHHHHHHHHHhhhhcccCCCeEEecCCCHHHHHHC
Confidence 46777654 355778889999888876 34443 77777888888874210 011357999999999874 57
Q ss_pred cccCCCCCccccchHHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhcc--CCc-eEecC-ceeeeeccCCCCCCeEEE
Q 020692 155 FYFSDHVLPLFETGIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDH--FPT-VREGD-KRIVRIKEGNPAGCHVVI 230 (322)
Q Consensus 155 g~f~~~v~~l~~~~~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~--L~~-~r~~~-k~~~~~~~~~v~g~~vli 230 (322)
|| +|+.++|+.+.+..+. + ++.+.+.|.+..... ++. .|..+ +..+ ...++++|++|+|
T Consensus 130 Gf----------nq~~~la~~la~~~~~--~----~~~~~l~r~~~~~~q~~l~~~~R~~n~~~~f-~~~~~~~~~~vll 192 (227)
T PRK11595 130 GF----------NQSDLLCRPLARWLGC--D----YDSEALTRTRATATQHFLSARLRKRNLKNAF-RLELPVQGQHMAI 192 (227)
T ss_pred CC----------CHHHHHHHHHHHHHCC--C----CcccceEEecCCCCcccCCHHHHhhhhhhhh-ccCCCCCCCEEEE
Confidence 88 4788999988775322 1 233344444433322 222 12221 1112 2345789999999
Q ss_pred EeccccChHhHHHHHHHHHHcCCCeEEEEEEe
Q 020692 231 VDDLVQSGGTLIECQKVLAAHGAAKVSAYVTH 262 (322)
Q Consensus 231 vDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH 262 (322)
||||+|||.|+.++++.|++.|+.+|++++..
T Consensus 193 vDDv~tTG~Tl~~~~~~L~~~g~~~V~~~~la 224 (227)
T PRK11595 193 VDDVVTTGSTVAEIAQLLLRNGAASVQVWCLC 224 (227)
T ss_pred EeeeecchHHHHHHHHHHHHcCCcEEEEEEEE
Confidence 99999999999999999999999999999853
No 22
>PRK08525 amidophosphoribosyltransferase; Provisional
Probab=99.53 E-value=4.6e-14 Score=140.49 Aligned_cols=139 Identities=14% Similarity=0.156 Sum_probs=103.1
Q ss_pred HHHHHHhcCC-CCCCceEeccCCchHHHHHHHhccCCc------eEec--------Cc-------eeeee-c-cCCCCCC
Q 020692 171 LLKQRLHQLP-DANNIVIAFPDDGAWKRFHKMLDHFPT------VREG--------DK-------RIVRI-K-EGNPAGC 226 (322)
Q Consensus 171 ~la~~l~~~~-~~~~~vvV~Pd~Ga~~ra~~~a~~L~~------~r~~--------~k-------~~~~~-~-~~~v~g~ 226 (322)
.+++.|.+.. ...+.++..||. +..+|..+++.++. +|.. .. ..+.. . ...++||
T Consensus 263 ~~G~~La~~~~~~~d~Vv~vPd~-g~~~A~~~A~~lgip~~~~l~rk~~~~r~~i~~~qr~rn~~~~~~~~~~~~~v~gK 341 (445)
T PRK08525 263 KMGEELAKKFPIKADFVVPVPDS-GVPAAIGYAQESGIPFEMAIVRNHYVGRTFIEPTQEMRNLKVKLKLNPMSKVLEGK 341 (445)
T ss_pred HHHHHHHHHhcccCCeEEECCch-HHHHHHHHHHHhCCCccceEEEeeccccccCCHHHHHHhhheeEEecccccccCCC
Confidence 3444444322 124578888985 58889999887764 1211 00 01111 1 2348999
Q ss_pred eEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCchhhhccCCC
Q 020692 227 HVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAP 306 (322)
Q Consensus 227 ~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~~~~~~~~~k 306 (322)
+|+||||+++||+|+.++++.|+++||++|+++++||+|..++...|..++ ++++++||.-..+..+....+-
T Consensus 342 ~VlLVDDvitTG~Tl~~a~~~Lr~aGA~~V~v~~~hp~~~~~~~~~i~~~~-------~~~li~~~~~~~ei~~~~~ads 414 (445)
T PRK08525 342 RIVVIDDSIVRGTTSKKIVSLLRAAGAKEIHLRIACPEIKFPCYYGIDTPT-------FEELISANKSVEEVRKYIGADS 414 (445)
T ss_pred eEEEEecccCcHHHHHHHHHHHHhcCCCEEEEEEECCCcCCchhhhCcCCC-------hhhEEEcCCCHHHHHHHhCCCe
Confidence 999999999999999999999999999999999999999999999999887 8999999985443333345677
Q ss_pred eEEEechHHHH
Q 020692 307 FEVLSLAGSIA 317 (322)
Q Consensus 307 ~~~~~va~~la 317 (322)
+..+|+..+..
T Consensus 415 l~~ls~~~l~~ 425 (445)
T PRK08525 415 LSFLSIDELTR 425 (445)
T ss_pred EeccCHHHHHH
Confidence 88899887765
No 23
>PLN02293 adenine phosphoribosyltransferase
Probab=99.44 E-value=1.5e-12 Score=115.54 Aligned_cols=106 Identities=21% Similarity=0.235 Sum_probs=85.1
Q ss_pred HHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc----eEecCce----------------eeeeccCCC-CCCe
Q 020692 169 IPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT----VREGDKR----------------IVRIKEGNP-AGCH 227 (322)
Q Consensus 169 ~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~~~k~----------------~~~~~~~~v-~g~~ 227 (322)
.+.+++++.+ .+..+|++|+.+|+.+|..++..|+. .|+..+. ......+.+ +|++
T Consensus 51 ~~~l~~~~~~---~~~d~Ivg~e~~Gi~lA~~lA~~Lg~p~v~~rK~~k~~~~~~~~~~~~~~g~~~l~l~~~~i~~G~r 127 (187)
T PLN02293 51 IDLFVERYRD---MGISVVAGIEARGFIFGPPIALAIGAKFVPLRKPGKLPGEVISEEYVLEYGTDCLEMHVGAVEPGER 127 (187)
T ss_pred HHHHHHHHhh---cCCCEEEEeCCCchHHHHHHHHHHCCCEEEEEecCCCCCceEEEEEeccCCceEEEEEcCccCCCCE
Confidence 5666666654 34579999999999999999988876 3443321 011123556 7999
Q ss_pred EEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhccc
Q 020692 228 VVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKN 277 (322)
Q Consensus 228 vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~ 277 (322)
|+||||+++||+|+.++++.|++.|+..+.++|+|.++..++.++|.+.+
T Consensus 128 VlIVDDvitTG~T~~~~~~~l~~~Ga~~v~~~~~~~~~~~~g~~~l~~~~ 177 (187)
T PLN02293 128 ALVIDDLIATGGTLCAAINLLERAGAEVVECACVIELPELKGREKLNGKP 177 (187)
T ss_pred EEEEeccccchHHHHHHHHHHHHCCCEEEEEEEEEEcCCccHHHHhcCCc
Confidence 99999999999999999999999999999999999999999999998765
No 24
>COG1040 ComFC Predicted amidophosphoribosyltransferases [General function prediction only]
Probab=99.44 E-value=3.2e-13 Score=123.07 Aligned_cols=148 Identities=21% Similarity=0.215 Sum_probs=102.1
Q ss_pred CccceEEeeccCCCCccc-hhcc-CCCcccHHHHHHHHhcCCC-CCCCCcEEEEecCChhh--hhcccCCCCCccccchH
Q 020692 95 FVASFTLVLPFFPTGSFE-RMEE-EGDVATAFTMARILSNIPT-SRGGPTSLVIYDIHALQ--ERFYFSDHVLPLFETGI 169 (322)
Q Consensus 95 ~a~~i~~viPY~~YsRqd-r~~~-~ge~~sak~~a~lL~~~~~-~~~g~d~Ii~VdlHs~~--~~g~f~~~v~~l~~~~~ 169 (322)
.+.+..++..|-+..|+- .++| .|+..-++.+|++|..... ....+|.|++||+|..+ .+|| +|+
T Consensus 64 ~~~~~~~~~~Y~~~l~~~i~~~Kf~~~~~l~~~la~~l~~~~~~~~~~~~~iVpVPls~~r~~~RGF----------NQ~ 133 (225)
T COG1040 64 PFERLRSLGSYNGPLRELISQLKFQGDLDLAKLLARLLAKALDDFLEKPDLIVPVPLSPSRLLERGF----------NQS 133 (225)
T ss_pred cceeEEEEEEccHHHHHHHHHhhhCCchhHHHHHHHHHHHHHhhccccCCeEEEecCCHHHHHHcCC----------CHH
Confidence 355688888999888876 3444 3778888888888764321 12357899999999764 5898 589
Q ss_pred HHHHHHHhcCCCCCCceEeccCCchHHHHHHHhcc--CCc-eEecC-ceeeeeccCCCCC-CeEEEEeccccChHhHHHH
Q 020692 170 PLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDH--FPT-VREGD-KRIVRIKEGNPAG-CHVVIVDDLVQSGGTLIEC 244 (322)
Q Consensus 170 ~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~--L~~-~r~~~-k~~~~~~~~~v~g-~~vlivDDii~TG~Tl~~~ 244 (322)
+.+++.+...++ .+. ...|.+..... +.. .|..+ +..+. ..+..+. |+|+|||||+|||.|+.++
T Consensus 134 ~~la~~l~~~~~--~~~-------~~~r~k~~~~q~~l~~~~rr~nl~~aF~-~~~~~~~~~~vlLvDDV~TTGaTl~~~ 203 (225)
T COG1040 134 ELLARALARRLG--KPI-------ALRRVKDTSPQQGLKALERRRNLKGAFR-LKKGIEEPKNVLLVDDVYTTGATLKEA 203 (225)
T ss_pred HHHHHHHHHHhC--chH-------HHHHHhccccccccchHHHHHhccCCee-cCCCCCCCCeEEEEecccccHHHHHHH
Confidence 999999987532 221 34443433322 221 11111 22222 3334444 9999999999999999999
Q ss_pred HHHHHHcCCCeEEEEEEe
Q 020692 245 QKVLAAHGAAKVSAYVTH 262 (322)
Q Consensus 245 ~~~L~~~Ga~~v~~~~tH 262 (322)
++.|++.||++|.++++.
T Consensus 204 ~~~L~~~Ga~~v~~~~la 221 (225)
T COG1040 204 AKLLREAGAKRVFVLTLA 221 (225)
T ss_pred HHHHHHcCCceEEEEEEE
Confidence 999999999999999864
No 25
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=99.39 E-value=2.2e-12 Score=112.34 Aligned_cols=96 Identities=20% Similarity=0.227 Sum_probs=75.6
Q ss_pred hHHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc---e---E---ecCc-e---ee---eeccCCCCCCeEEEE
Q 020692 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT---V---R---EGDK-R---IV---RIKEGNPAGCHVVIV 231 (322)
Q Consensus 168 ~~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~---~---r---~~~k-~---~~---~~~~~~v~g~~vliv 231 (322)
....||+.|.+.+..+++++|+|+.||+.+|..+++.|+. + + ..++ + .. .....+++||+|+||
T Consensus 11 ~i~~lA~~I~~~~~~~~~vvv~i~~GG~~~a~~l~~~L~~~~~v~~i~~~~Y~~~~~~~~~~~~~~~~~~~~~gk~vliv 90 (166)
T TIGR01203 11 RIAELAKQITEDYAGKPLVLLCVLKGSFPFFADLIRYIAVPVQVDFMAVSSYGNGMQSSGDVKILKDLDLSIKGKDVLIV 90 (166)
T ss_pred HHHHHHHHHHHHcCCCCeEEEEEccCCHHHHHHHHHhcCCCceeeEEEEeeccCCCcccCceEEecCCCCCCCCCEEEEE
Confidence 4677888887654446789999999999999999988874 1 1 1111 1 11 123557899999999
Q ss_pred eccccChHhHHHHHHHHHHcCCCeEEEEEEec
Q 020692 232 DDLVQSGGTLIECQKVLAAHGAAKVSAYVTHG 263 (322)
Q Consensus 232 DDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~ 263 (322)
|||++||+|+.++++.|++.|+++|+++|.+.
T Consensus 91 DDii~TG~Tl~~~~~~l~~~g~~~i~~~~l~~ 122 (166)
T TIGR01203 91 EDIVDTGLTLQYLLDLLKARKPKSLKIVTLLD 122 (166)
T ss_pred eeeeCcHHHHHHHHHHHHHCCCCEEEEEEEEe
Confidence 99999999999999999999999999999543
No 26
>TIGR00201 comF comF family protein. This protein is found in species that do (Bacillus subtilis, Haemophilus influenzae) or do not (E. coli, Borrelia burgdorferi) have described systems for natural transformation with exogenous DNA. It is involved in competence for transformation in Bacillus subtilis.
Probab=99.38 E-value=3.2e-12 Score=113.56 Aligned_cols=144 Identities=22% Similarity=0.211 Sum_probs=91.8
Q ss_pred EEeeccCCCCccc-hhccC-CCcccHHHHHHHHhcCC-CC-CCCCcEEEEecCChh--hhhcccCCCCCccccchHHHHH
Q 020692 100 TLVLPFFPTGSFE-RMEEE-GDVATAFTMARILSNIP-TS-RGGPTSLVIYDIHAL--QERFYFSDHVLPLFETGIPLLK 173 (322)
Q Consensus 100 ~~viPY~~YsRqd-r~~~~-ge~~sak~~a~lL~~~~-~~-~~g~d~Ii~VdlHs~--~~~g~f~~~v~~l~~~~~~~la 173 (322)
.++..|-+..|+- ..+|. |+.-.++.+|++|.... .. ...+|.|++||+|.. +.+|| +++.+||
T Consensus 36 ~~~~~Y~~~~~~li~~~K~~~~~~l~~~l~~~l~~~~~~~~~~~~~~ivpVP~~~~r~~~RGf----------nq~~~la 105 (190)
T TIGR00201 36 VSVYTYNEPLKELISRFKFRGQAEIIRALASLLSLTVSKAYRDLPDVIVPVPLSKEREWRRGF----------NQADLLA 105 (190)
T ss_pred EEEEECchHHHHHHHHhccCCChHHHHHHHHHHHHHHHhhccCCCCEEEeCCCCHHHHHHhCC----------CHHHHHH
Confidence 5566777767755 34443 66667788888775321 00 123689999999987 45898 4788999
Q ss_pred HHHhcCCCCCCceEeccCCchHHHHHH-HhccCCc-eEecC-ceeeeeccCCCCCCeEEEEeccccChHhHHHHHHHHHH
Q 020692 174 QRLHQLPDANNIVIAFPDDGAWKRFHK-MLDHFPT-VREGD-KRIVRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAA 250 (322)
Q Consensus 174 ~~l~~~~~~~~~vvV~Pd~Ga~~ra~~-~a~~L~~-~r~~~-k~~~~~~~~~v~g~~vlivDDii~TG~Tl~~~~~~L~~ 250 (322)
+.+.+..+. . + ..+.|.+. -...++. .|..+ +..+.....+++|++|+|||||+|||.|+.++++.|++
T Consensus 106 ~~l~~~~~~----~--~--~~l~r~~~~~Q~~l~~~~R~~n~~~~f~~~~~~~~~~~vllvDDV~TTGaTl~~~~~~L~~ 177 (190)
T TIGR00201 106 QCLSRWLFN----Y--H--NIVIRLNNETQSKLKATLRFLNLENAFDLKNNSFQGRNIVLVDDVVTTGATLHEIARLLLE 177 (190)
T ss_pred HHHHHHhCC----C--c--ceEEEecccccccCCHHHHHHHHhCcEEccCCCCCCCEEEEEeeeeccHHHHHHHHHHHHH
Confidence 998764211 0 0 11222111 0111221 11111 11222222248899999999999999999999999999
Q ss_pred cCCCeEEEEEE
Q 020692 251 HGAAKVSAYVT 261 (322)
Q Consensus 251 ~Ga~~v~~~~t 261 (322)
.||.+|++++.
T Consensus 178 ~Ga~~V~~~~l 188 (190)
T TIGR00201 178 LGAASVQVWTL 188 (190)
T ss_pred cCCCEEEEEEE
Confidence 99999999985
No 27
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=99.36 E-value=4e-12 Score=112.19 Aligned_cols=95 Identities=19% Similarity=0.208 Sum_probs=74.2
Q ss_pred hHHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc------e---EecCce---ee--e-eccCCCCCCeEEEEe
Q 020692 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT------V---REGDKR---IV--R-IKEGNPAGCHVVIVD 232 (322)
Q Consensus 168 ~~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~------~---r~~~k~---~~--~-~~~~~v~g~~vlivD 232 (322)
....+|++|.+.+..+++++|+|+.||+.+|+.+++.|+. . +..+.. .. . ....+++||+|+|||
T Consensus 25 ~i~~la~~i~~~~~~~~~viV~i~~gg~~~A~~La~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~gk~VLIVD 104 (181)
T PRK09162 25 AIDRMADEITADLADENPLVLCVMGGGLVFTGQLLPRLDFPLEFDYLHATRYRNETTGGELVWKVKPRESLKGRTVLVVD 104 (181)
T ss_pred HHHHHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHHcCCCcccCEEEEEecCCCccCCceeEecCCCCCCCCCEEEEEc
Confidence 4667888887654456689999999999999999987764 1 111111 11 1 124578999999999
Q ss_pred ccccChHhHHHHHHHHHHcCCCeEEEEEEe
Q 020692 233 DLVQSGGTLIECQKVLAAHGAAKVSAYVTH 262 (322)
Q Consensus 233 Dii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH 262 (322)
||+|||.|+.++++.|++.||++|++++.+
T Consensus 105 DIidTG~Tl~~~~~~Lk~~Ga~~V~~avL~ 134 (181)
T PRK09162 105 DILDEGHTLAAIRDRCLEMGAAEVYSAVLV 134 (181)
T ss_pred cccCcHHHHHHHHHHHHhCCCCEEEEEEEE
Confidence 999999999999999999999999999854
No 28
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=99.32 E-value=8.9e-12 Score=107.80 Aligned_cols=98 Identities=20% Similarity=0.289 Sum_probs=80.5
Q ss_pred hHHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc--------e-EecCc-------eeeeeccCCCCCCeEEEE
Q 020692 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT--------V-REGDK-------RIVRIKEGNPAGCHVVIV 231 (322)
Q Consensus 168 ~~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~--------~-r~~~k-------~~~~~~~~~v~g~~vliv 231 (322)
....+|++|.+.+..+++++|+...|++.++.++...+.. + +.+++ ++.+.+..+++||+|+||
T Consensus 20 ri~ela~~I~~~y~g~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i~kDld~di~grdVLiV 99 (178)
T COG0634 20 RIKELAAQITEDYGGKDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKILKDLDEDIKGRDVLIV 99 (178)
T ss_pred HHHHHHHHHHHhhCCCceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEEecccccCCCCCeEEEE
Confidence 4677999998877678999999999999999999887665 1 22221 122345778999999999
Q ss_pred eccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcc
Q 020692 232 DDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKG 268 (322)
Q Consensus 232 DDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~ 268 (322)
|||++||.||..+.+.|+.+||+++..++ ++.++
T Consensus 100 eDIiDsG~TLs~i~~~l~~r~a~sv~i~t---LldK~ 133 (178)
T COG0634 100 EDIIDSGLTLSKVRDLLKERGAKSVRIAT---LLDKP 133 (178)
T ss_pred ecccccChhHHHHHHHHHhCCCCeEEEEE---EeeCc
Confidence 99999999999999999999999999998 55554
No 29
>PRK13812 orotate phosphoribosyltransferase; Provisional
Probab=99.29 E-value=1.7e-11 Score=107.83 Aligned_cols=108 Identities=19% Similarity=0.189 Sum_probs=80.4
Q ss_pred hHHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc----eEecCcee--eeeccCCC-CCCeEEEEeccccChHh
Q 020692 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT----VREGDKRI--VRIKEGNP-AGCHVVIVDDLVQSGGT 240 (322)
Q Consensus 168 ~~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~~~k~~--~~~~~~~v-~g~~vlivDDii~TG~T 240 (322)
..+.+++++.+... +.+++++|+.||+++|..++..|+. .|+..+.. .....+.+ +|++|+||||+++||+|
T Consensus 44 ~~~~i~~~l~~~i~-~~d~ivg~~~ggi~lA~~lA~~l~~p~~~~rk~~k~yg~~~~~~g~~~~g~~VlIVDDvitTG~T 122 (176)
T PRK13812 44 CLRLIAEAFADRID-EDTKLAGVALGAVPLVAVTSVETGVPYVIARKQAKEYGTGNRIEGRLDEGEEVVVLEDIATTGQS 122 (176)
T ss_pred HHHHHHHHHHHHhc-cCCEEEEeecchHHHHHHHHHHHCCCEEEEeccCCcCCCCCeEEecCCCcCEEEEEEEeeCCCHH
Confidence 35667777765432 3379999999999999999988876 34433221 11234565 89999999999999999
Q ss_pred HHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhccc
Q 020692 241 LIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKN 277 (322)
Q Consensus 241 l~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~ 277 (322)
+.++++.|+++|++.+.++|.--.- .++.+++++.|
T Consensus 123 l~~~~~~l~~~Ga~vv~~~vlvdr~-~~~~~~l~~~g 158 (176)
T PRK13812 123 AVDAVEALREAGATVNRVLVVVDRE-EGARENLADHD 158 (176)
T ss_pred HHHHHHHHHHCCCeEEEEEEEEECC-cchHHHHHhcC
Confidence 9999999999999998888854432 35567777765
No 30
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional
Probab=99.28 E-value=1.9e-11 Score=107.56 Aligned_cols=94 Identities=17% Similarity=0.252 Sum_probs=73.1
Q ss_pred hHHHHHHHHhcCCC--CCCceEeccCCchHHHHHHHhccCCc---------eEecC-ce---ee---eeccCCCCCCeEE
Q 020692 168 GIPLLKQRLHQLPD--ANNIVIAFPDDGAWKRFHKMLDHFPT---------VREGD-KR---IV---RIKEGNPAGCHVV 229 (322)
Q Consensus 168 ~~~~la~~l~~~~~--~~~~vvV~Pd~Ga~~ra~~~a~~L~~---------~r~~~-k~---~~---~~~~~~v~g~~vl 229 (322)
....+|..|.+.+. ..++++|+++.||+.+|+.+++.|+. .+.++ .. .. .....+++||+|+
T Consensus 17 ~i~~lA~~I~~~~~~~~~~~vvvgI~~Gg~~fa~~L~~~L~~~~~v~~l~~ssY~~~~~~~~~v~i~~~~~~~v~gk~VL 96 (178)
T PRK15423 17 RIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVL 96 (178)
T ss_pred HHHHHHHHHHHHhcccCCCeEEEEEecCChHHHHHHHHHhCCCcceeEEEEEEecCCCcccCceEEecCCCCCCCCCEEE
Confidence 46678888876433 24689999999999999999987764 12321 11 11 1234579999999
Q ss_pred EEeccccChHhHHHHHHHHHHcCCCeEEEEEE
Q 020692 230 IVDDLVQSGGTLIECQKVLAAHGAAKVSAYVT 261 (322)
Q Consensus 230 ivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~t 261 (322)
|||||++||.|+.++.+.|++.|+++|.+++.
T Consensus 97 lVDDIiDTG~TL~~l~~~l~~~~~~~v~~avL 128 (178)
T PRK15423 97 IVEDIIDSGNTLSKVREILSLREPKSLAICTL 128 (178)
T ss_pred EEeeecCchHHHHHHHHHHHhCCCCEEEEEEE
Confidence 99999999999999999999999999999984
No 31
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=99.27 E-value=1.9e-11 Score=100.16 Aligned_cols=94 Identities=28% Similarity=0.293 Sum_probs=73.5
Q ss_pred hHHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc----eEe-------cCc--e---e---eeeccCCCCCCeE
Q 020692 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT----VRE-------GDK--R---I---VRIKEGNPAGCHV 228 (322)
Q Consensus 168 ~~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~-------~~k--~---~---~~~~~~~v~g~~v 228 (322)
....++++|.+. ..+.+.++++..||+..|..++..|+. .+. ... . . .......++||+|
T Consensus 13 ~~~~la~~i~~~-~~~~~~ivgi~~~G~~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~v 91 (125)
T PF00156_consen 13 LAERLAEQIKES-GFDFDVIVGIPRGGIPLAAALARALGIPLVFVRKRKSYYPGSDKTSREKNNQELFIIDKEDIKGKRV 91 (125)
T ss_dssp HHHHHHHHHHHH-TTTSSEEEEETTTTHHHHHHHHHHHTHEEEEEEEEEEEESEEEEEEEETEEEEEEEEESSSGTTSEE
T ss_pred HHHHHHHHHHHh-CCCCCEEEeehhccHHHHHHHHHHhCCCccceeeeecccccchhhhhccCceEEeecccccccceeE
Confidence 467788888765 345567999999999999999987765 111 010 0 0 1124567899999
Q ss_pred EEEeccccChHhHHHHHHHHHHcCCCeEEEEEEe
Q 020692 229 VIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTH 262 (322)
Q Consensus 229 livDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH 262 (322)
+||||+++||+|+..+++.|++.|++.|.+++.|
T Consensus 92 liVDDvi~tG~Tl~~~~~~L~~~g~~~v~~~vl~ 125 (125)
T PF00156_consen 92 LIVDDVIDTGGTLKEAIELLKEAGAKVVGVAVLV 125 (125)
T ss_dssp EEEEEEESSSHHHHHHHHHHHHTTBSEEEEEEEE
T ss_pred EEEeeeEcccHHHHHHHHHHHhCCCcEEEEEEEC
Confidence 9999999999999999999999999999999865
No 32
>PRK12560 adenine phosphoribosyltransferase; Provisional
Probab=99.25 E-value=6.4e-11 Score=105.10 Aligned_cols=122 Identities=15% Similarity=0.088 Sum_probs=84.4
Q ss_pred HHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc-eEecCc-------------ee----e---eeccCCCCCCeE
Q 020692 170 PLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT-VREGDK-------------RI----V---RIKEGNPAGCHV 228 (322)
Q Consensus 170 ~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~-~r~~~k-------------~~----~---~~~~~~v~g~~v 228 (322)
..+++.+.+..+.+.++|++|+.||+.+|..++..++. .+...| .. . ....+..+|++|
T Consensus 38 ~~~~~~l~~~~~~~~D~Ivg~e~~Gi~lA~~vA~~l~~p~~~~rk~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~G~rV 117 (187)
T PRK12560 38 KETAKEIIKYIDKDIDKIVTEEDKGAPLATPVSLLSGKPLAMARWYPYSLSELNYNVVEIGSEYFEGVVYLNGIEKGDRV 117 (187)
T ss_pred HHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHHhhCCCEEEeccCCCcccceeEEeeeeeccceeeeeEccCCCCcCEE
Confidence 33444443332345679999999999999999987765 221111 00 0 012234689999
Q ss_pred EEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhc-ccCCCccCCcCEEEEecCCcC
Q 020692 229 VIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTL-KNGENMENAFANFWITDSCPL 296 (322)
Q Consensus 229 livDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~-s~~~g~~~~~~~iv~Tdti~~ 296 (322)
+||||+++||+|+.++++.++++||..+.++|.-..-..++.++|.+ .++ + +-.++..+..++
T Consensus 118 lIVDDvitTG~T~~~ai~ll~~aGa~vv~v~~vvd~~~~~g~~~l~~~~gv---~--v~sl~~~~~~~~ 181 (187)
T PRK12560 118 AIIDDTLSTGGTVIALIKAIENSGGIVSDVICVIEKTQNNGRKKLFTQTGI---N--VKSLVKIDVKPH 181 (187)
T ss_pred EEEEeccccCHHHHHHHHHHHHCCCEEEEEEEEEEecccchHHHHhhccCC---c--EEEEEEEEEecC
Confidence 99999999999999999999999999998888655433356777743 342 2 667777666655
No 33
>PRK05793 amidophosphoribosyltransferase; Provisional
Probab=99.23 E-value=6.4e-11 Score=118.75 Aligned_cols=139 Identities=17% Similarity=0.148 Sum_probs=100.0
Q ss_pred HHHHHHhcCCCC-CCceEeccCCchHHHHHHHhccCCc------eEecC------------c---eeee--eccCCCCCC
Q 020692 171 LLKQRLHQLPDA-NNIVIAFPDDGAWKRFHKMLDHFPT------VREGD------------K---RIVR--IKEGNPAGC 226 (322)
Q Consensus 171 ~la~~l~~~~~~-~~~vvV~Pd~Ga~~ra~~~a~~L~~------~r~~~------------k---~~~~--~~~~~v~g~ 226 (322)
.+++.|.+.... .+.++..||. +..+|..+++.++. +|... + ...+ ...++++||
T Consensus 276 ~~G~~La~~~~~~~D~Vv~vPds-g~~~A~~~A~~lgip~~~~l~r~~~~~rtfi~~~q~~R~~~~~~k~~~~~~~v~gk 354 (469)
T PRK05793 276 RAGRQLYKEYPVDADIVIGVPDS-GIPAAIGYAEASGIPYGIGFIKNKYVGRTFIAPSQELRERAVRVKLNPLKVNVEGK 354 (469)
T ss_pred HHHHHHHHhcCCCCCEEEEcCcc-HHHHHHHHHHHhCCCEeeeEEEeeeccccccChhHhhhhhhheEecccCccccCCC
Confidence 455555543222 2456777875 58888888877665 12110 0 0111 223568999
Q ss_pred eEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCchhhhccCCC
Q 020692 227 HVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAP 306 (322)
Q Consensus 227 ~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~~~~~~~~~k 306 (322)
+|+||||+++||.|+.++++.|+++||++|+++++||.|..++...|..+. .+++++.+--.......-..+-
T Consensus 355 ~VlLVDD~ItTGtTl~~~~~~Lr~aGAk~V~~~~~~p~~~~p~~~gid~~~-------~~elia~~~~~~ei~~~~g~ds 427 (469)
T PRK05793 355 RVVLIDDSIVRGTTSKRLVELLRKAGAKEVHFRVSSPPVKYPCYFGIDTPY-------RKELIGANMSVEEIREMIGADS 427 (469)
T ss_pred EEEEEccccCchHHHHHHHHHHHHcCCCEEEEEEECCCcCcchhhhccCCC-------hhhEEEcCCCHHHHHHHhCCCe
Confidence 999999999999999999999999999999999999999999999998876 7899987753322222234567
Q ss_pred eEEEechHHHH
Q 020692 307 FEVLSLAGSIA 317 (322)
Q Consensus 307 ~~~~~va~~la 317 (322)
+..+|+..++.
T Consensus 428 l~~ls~~~l~~ 438 (469)
T PRK05793 428 LGYLSIEGLLE 438 (469)
T ss_pred EeccCHHHHHH
Confidence 88888877764
No 34
>PRK02304 adenine phosphoribosyltransferase; Provisional
Probab=99.22 E-value=9.9e-11 Score=102.65 Aligned_cols=91 Identities=25% Similarity=0.216 Sum_probs=70.9
Q ss_pred CCceEeccCCchHHHHHHHhccCCc----eEecCce----------------eeeecc--CCCCCCeEEEEeccccChHh
Q 020692 183 NNIVIAFPDDGAWKRFHKMLDHFPT----VREGDKR----------------IVRIKE--GNPAGCHVVIVDDLVQSGGT 240 (322)
Q Consensus 183 ~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~~~k~----------------~~~~~~--~~v~g~~vlivDDii~TG~T 240 (322)
+.++|++|+.||+.+|..++..++. .|+..+. .+ ... ..++|++|+||||+++||+|
T Consensus 51 ~~d~Ivgv~~~Gi~~a~~la~~l~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~l-~l~~~~~~~g~~VLIVDDivtTG~T 129 (175)
T PRK02304 51 DIDKIVGIEARGFIFGAALAYKLGIGFVPVRKPGKLPRETISESYELEYGTDTL-EIHKDAIKPGDRVLIVDDLLATGGT 129 (175)
T ss_pred CCCEEEEEccchHHHHHHHHHHhCCCEEEEEcCCCCCCceEeEEEecccCceEE-EEchhhcCCCCEEEEEeCCccccHH
Confidence 5689999999999999999988876 2322110 01 112 23789999999999999999
Q ss_pred HHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHh
Q 020692 241 LIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFT 274 (322)
Q Consensus 241 l~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~ 274 (322)
+.++++.|+++||+.+.++|.+..-..++.+++.
T Consensus 130 l~~~~~~l~~~Ga~~v~v~vl~~~~~~~g~~~l~ 163 (175)
T PRK02304 130 LEAAIKLLERLGAEVVGAAFVIELPDLGGREKLE 163 (175)
T ss_pred HHHHHHHHHHcCCEEEEEEEEEEcccccchhhcC
Confidence 9999999999999999999987765444566665
No 35
>PRK02277 orotate phosphoribosyltransferase-like protein; Provisional
Probab=99.22 E-value=7.1e-11 Score=105.88 Aligned_cols=102 Identities=20% Similarity=0.201 Sum_probs=74.4
Q ss_pred HHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc----eEecC---c--ee----eeeccCCCCCCeEEEEeccc
Q 020692 169 IPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT----VREGD---K--RI----VRIKEGNPAGCHVVIVDDLV 235 (322)
Q Consensus 169 ~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~~~---k--~~----~~~~~~~v~g~~vlivDDii 235 (322)
+..+++.+... +.+.++|++|..||+.+|..++..|+. .+... . .. +....++++||+|+||||++
T Consensus 72 ~~~la~~i~~~-~~~~D~Ivgi~~gG~~~A~~lA~~L~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~gk~VlIVDDVi 150 (200)
T PRK02277 72 ASAMADMLEKE-DEEVDVVVGIAKSGVPLATLVADELGKDLAIYHPKKWDHGEGEKKTGSFSRNFASVEGKRCVIVDDVI 150 (200)
T ss_pred HHHHHHHHHhc-CCCCCEEEeeccCCHHHHHHHHHHhCCCcEEEecccccccccccccceeccccccCCcCEEEEEeecc
Confidence 45566655322 245679999999999999999988876 22211 0 01 11123467999999999999
Q ss_pred cChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHh
Q 020692 236 QSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFT 274 (322)
Q Consensus 236 ~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~ 274 (322)
|||+|+.++++.|+++|++.+.++| ++..++.+++.
T Consensus 151 tTG~Tl~~ai~~l~~~Ga~~v~v~v---lvdk~g~~~~~ 186 (200)
T PRK02277 151 TSGTTMKETIEYLKEHGGKPVAVVV---LIDKSGIDEID 186 (200)
T ss_pred CchHHHHHHHHHHHHcCCEEEEEEE---EEECcchhhhc
Confidence 9999999999999999999999998 44445555443
No 36
>PRK13809 orotate phosphoribosyltransferase; Provisional
Probab=99.22 E-value=9.1e-11 Score=105.60 Aligned_cols=117 Identities=17% Similarity=0.214 Sum_probs=83.0
Q ss_pred HHHHHHHHhcCC-CCCCceEeccCCchHHHHHHHhccCCc----eEecCce-----eeeeccCC-CCCCeEEEEeccccC
Q 020692 169 IPLLKQRLHQLP-DANNIVIAFPDDGAWKRFHKMLDHFPT----VREGDKR-----IVRIKEGN-PAGCHVVIVDDLVQS 237 (322)
Q Consensus 169 ~~~la~~l~~~~-~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~~~k~-----~~~~~~~~-v~g~~vlivDDii~T 237 (322)
...+++.+.+.. ..+.+++++|+.+|+.+|..++..++. .|+..|. .+. ..+. .+|++|+||||++||
T Consensus 52 l~~i~~~l~~~~~~~~~d~IvG~~~~Gi~~A~~vA~~l~~p~~~~RK~~K~~G~~~~~~-~~g~~~~g~~VlIVDDViTT 130 (206)
T PRK13809 52 LQTIATLIWRLRPSFNSSLLCGVPYTALTLATSISLKYNIPMVLRRKELKNVDPSDAIK-VEGLFTPGQTCLVINDMVSS 130 (206)
T ss_pred HHHHHHHHHHHhccCCCCEEEEecCccHHHHHHHHHHhCCCEEEEeCCCCCCCCcCEEE-EccccCCCCEEEEEEecccc
Confidence 334444444321 245689999999999999999987776 3443332 121 1333 589999999999999
Q ss_pred hHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEec
Q 020692 238 GGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITD 292 (322)
Q Consensus 238 G~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Td 292 (322)
|+|+.++++.|++.|+..+.++|.-... .++.+++.+.|+. +..++..+
T Consensus 131 G~Ti~~a~~~L~~~G~~vv~v~vlvdr~-~~~~~~l~~~gi~-----v~sl~~~~ 179 (206)
T PRK13809 131 GKSIIETAVALEEEGLVVREALVFLDRQ-KGACQPLGPQGIK-----LSSVFTVP 179 (206)
T ss_pred CHHHHHHHHHHHHCCCEEEEEEEEEECc-ccHHHHHHhcCCC-----EEEEEEHH
Confidence 9999999999999999988888865532 4677888776532 55555433
No 37
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=99.21 E-value=7.2e-11 Score=104.96 Aligned_cols=99 Identities=23% Similarity=0.317 Sum_probs=76.0
Q ss_pred hHHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc---------eE---ecC-ce---eee----eccCCCCCCe
Q 020692 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT---------VR---EGD-KR---IVR----IKEGNPAGCH 227 (322)
Q Consensus 168 ~~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~---------~r---~~~-k~---~~~----~~~~~v~g~~ 227 (322)
....||+.|.+.+..+++++|++..||+.+|..+++.|+. ++ .++ .. ... ....+++||+
T Consensus 20 ~i~~lA~~I~~~~~~~~~vivgi~~Gg~~fa~~L~~~L~~~~~~~~i~fi~~~sy~~~~~~~g~~~i~~~~~~~~v~gk~ 99 (189)
T PLN02238 20 RVAELAAQIASDYAGKSPVVLGVATGAFMFLADLVRAIQPLPRGLTVDFIRASSYGGGTESSGVAKVSGADLKIDVKGKH 99 (189)
T ss_pred HHHHHHHHHHHHcCCCCcEEEEEccCCHHHHHHHHHHhCccCCCeEEEEEEeeecCCCccccCceeEecCCCCCCCCCCE
Confidence 3566888887754446689999999999999999987763 22 111 10 111 1235689999
Q ss_pred EEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcch
Q 020692 228 VVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGS 269 (322)
Q Consensus 228 vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a 269 (322)
|+|||||+|||+|+.++++.|++.|+++|.++| ++.++.
T Consensus 100 VliVDDIidTG~Tl~~~~~~l~~~g~~~v~~av---L~dK~~ 138 (189)
T PLN02238 100 VLLVEDIVDTGNTLSALVAHLEAKGAASVSVCA---LLDKRA 138 (189)
T ss_pred EEEEecccchHHHHHHHHHHHHhCCCCEEEEEE---EEECCc
Confidence 999999999999999999999999999999998 555554
No 38
>TIGR01090 apt adenine phosphoribosyltransferase. A phylogenetic analysis suggested omitting the bi-directional best hit homologs from the spirochetes from the seed for this model and making only tentative predictions of adenine phosphoribosyltransferase function for this lineage.
Probab=99.18 E-value=1.8e-10 Score=100.44 Aligned_cols=105 Identities=24% Similarity=0.251 Sum_probs=77.0
Q ss_pred hHHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc----eEecCc----------------eeeeec-cCCCCCC
Q 020692 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT----VREGDK----------------RIVRIK-EGNPAGC 226 (322)
Q Consensus 168 ~~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~~~k----------------~~~~~~-~~~v~g~ 226 (322)
....+++.+.+ .+.+++++|+.+|+.+|..++..|+. .++..+ ..+... ....+||
T Consensus 34 ~~~~la~~i~~---~~~d~ivgi~~~G~~~A~~la~~L~~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk 110 (169)
T TIGR01090 34 LIDLLVERYKD---ANIDYIVGPEARGFIFGAALAYKLGVGFVPVRKPGKLPGETISASYDLEYGKDQLEIHKDAIKPGQ 110 (169)
T ss_pred HHHHHHHHhcc---CCCCEEEeehhccHHHHHHHHHHHCCCEEEEEeCCCCCCceeeeEEeeccCceEEEEehhhcCCcC
Confidence 35556666644 24579999999999999999987776 222211 001111 1235899
Q ss_pred eEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhc
Q 020692 227 HVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTL 275 (322)
Q Consensus 227 ~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~ 275 (322)
+|+||||++|||+|+.++++.|++.|++.+.+++.-..-..++.+++.+
T Consensus 111 ~VLIVDDIitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~~~~g~~~i~~ 159 (169)
T TIGR01090 111 RVLIVDDLLATGGTAEATDELIRKLGGEVVEAAFLIELKDLNGRAKLEP 159 (169)
T ss_pred EEEEEeccccchHHHHHHHHHHHHcCCEEEEEEEEEEccccChHHHhcc
Confidence 9999999999999999999999999999999988766544466777655
No 39
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed
Probab=99.18 E-value=1.4e-10 Score=104.73 Aligned_cols=106 Identities=15% Similarity=0.158 Sum_probs=83.2
Q ss_pred CCceEeccCCchHHHHHHHhccCCc--------eEecCc-e---eeeeccCCCCCCeEEEEeccccChHhHHHHHHHHHH
Q 020692 183 NNIVIAFPDDGAWKRFHKMLDHFPT--------VREGDK-R---IVRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAA 250 (322)
Q Consensus 183 ~~~vvV~Pd~Ga~~ra~~~a~~L~~--------~r~~~k-~---~~~~~~~~v~g~~vlivDDii~TG~Tl~~~~~~L~~ 250 (322)
+++++|+++.||+.++..+.+.|+. .|.... . ....+..+++||+|+|+|||++||+|+..+++.|++
T Consensus 70 ~~~vvV~IlrgG~~~~~~l~~~l~~~~~~~i~~~r~~~t~~~~~~~~~lp~~i~~~~VllvDd~laTG~Tl~~ai~~L~~ 149 (209)
T PRK00129 70 KKLVIVPILRAGLGMVDGVLKLIPSARVGHIGLYRDEETLEPVEYYVKLPEDIDERTVIVVDPMLATGGSAIAAIDLLKK 149 (209)
T ss_pred CeEEEEEEeCCCHHHHHHHHHhCCcCeeeeEEEEeCCCCCCCEEEEeeCCCcCCCCEEEEECCcccchHHHHHHHHHHHH
Confidence 4689999999999999999987764 122111 1 112356689999999999999999999999999999
Q ss_pred cCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCc
Q 020692 251 HGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLT 297 (322)
Q Consensus 251 ~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~ 297 (322)
+|+++|.++|+ +++++++++|.+++ =+--++|-++...
T Consensus 150 ~G~~~I~~~~l--l~~~~gl~~l~~~~-------p~v~i~~~~iD~~ 187 (209)
T PRK00129 150 RGAKNIKVLCL--VAAPEGIKALEEAH-------PDVEIYTAAIDEK 187 (209)
T ss_pred cCCCEEEEEEE--ecCHHHHHHHHHHC-------CCcEEEEEeecCC
Confidence 99999999997 78899999999885 1333455566543
No 40
>PRK05205 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Provisional
Probab=99.16 E-value=2.1e-10 Score=100.75 Aligned_cols=95 Identities=17% Similarity=0.167 Sum_probs=71.7
Q ss_pred hHHHHHHHHhcCC-CCCCceEeccCCchHHHHHHHhccCC----c------e---EecCce-------ee--eeccCCCC
Q 020692 168 GIPLLKQRLHQLP-DANNIVIAFPDDGAWKRFHKMLDHFP----T------V---REGDKR-------IV--RIKEGNPA 224 (322)
Q Consensus 168 ~~~~la~~l~~~~-~~~~~vvV~Pd~Ga~~ra~~~a~~L~----~------~---r~~~k~-------~~--~~~~~~v~ 224 (322)
....||+++.+.+ +.+++++++++.||+.++..+++.|+ . + +..+.. .. ....++++
T Consensus 15 ~i~~la~~i~~~~~~~~~~viv~il~gG~~~a~~La~~L~~~~~~~~~~~~l~~~~y~~~~~~~~~~~~~~~~~l~~~v~ 94 (176)
T PRK05205 15 ALTRIAHEIIERNKGLDNLVLVGIKTRGVWLAERLAERLEQLEGVDVPVGELDITLYRDDLTKKGLHPQVKPTDIPFDIE 94 (176)
T ss_pred HHHHHHHHHHHHcCCCCCeEEEEEccCCHHHHHHHHHHHHHHcCCCCccceEEEEEeecCccccCcccccccccCCCCCC
Confidence 4567788886642 23678999999999999999887762 1 1 112110 11 12345799
Q ss_pred CCeEEEEeccccChHhHHHHHHHHHHcC-CCeEEEEEEe
Q 020692 225 GCHVVIVDDLVQSGGTLIECQKVLAAHG-AAKVSAYVTH 262 (322)
Q Consensus 225 g~~vlivDDii~TG~Tl~~~~~~L~~~G-a~~v~~~~tH 262 (322)
||+|+|||||++||+|+.++++.|++.| +++|.+++..
T Consensus 95 gr~VLIVDDIidTG~Tl~~~~~~L~~~G~~~~v~~avL~ 133 (176)
T PRK05205 95 GKRVILVDDVLYTGRTIRAALDALFDYGRPARVQLAVLV 133 (176)
T ss_pred CCEEEEEecccCcHHHHHHHHHHHHhcCCCcEEEEEEEE
Confidence 9999999999999999999999999999 7889988853
No 41
>TIGR01367 pyrE_Therm orotate phosphoribosyltransferase, Thermus family. This model represents a distinct clade of orotate phosphoribosyltransferases. Members include the experimentally determined example from Thermus aquaticus and additional examples from Caulobacter crescentus, Helicobacter pylori, Mesorhizobium loti, and related species.
Probab=99.13 E-value=3.8e-10 Score=100.16 Aligned_cols=94 Identities=18% Similarity=0.225 Sum_probs=71.4
Q ss_pred hHHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc----eEecCceeeeeccC--CCCCCeEEEEeccccChHhH
Q 020692 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT----VREGDKRIVRIKEG--NPAGCHVVIVDDLVQSGGTL 241 (322)
Q Consensus 168 ~~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~~~k~~~~~~~~--~v~g~~vlivDDii~TG~Tl 241 (322)
.+..+++++... ..+.++|++++.||+.+|..++..|+. .+...+. .....+ ..+|++|+||||+++||+|+
T Consensus 44 ~~~~La~~i~~~-~~~~d~Ivgi~~gGi~~A~~la~~L~~~~i~~~k~~~~-~~~~~~~~l~~G~~VLIVDDIi~TG~Tl 121 (187)
T TIGR01367 44 LGGELAQKILDY-GLKVDFIVGPAMGGVILGYEVARQLSVRSIFAEREGGG-MKLRRGFAVKPGEKFVAVEDVVTTGGSL 121 (187)
T ss_pred HHHHHHHHHHHh-CCCCCEEEEEccCcHHHHHHHHHHhCCCeEEEEEeCCc-EEEeecccCCCCCEEEEEEeeecchHHH
Confidence 355677777542 346789999999999999999988876 2322221 111111 24899999999999999999
Q ss_pred HHHHHHHHHcCCCeEEEEEEec
Q 020692 242 IECQKVLAAHGAAKVSAYVTHG 263 (322)
Q Consensus 242 ~~~~~~L~~~Ga~~v~~~~tH~ 263 (322)
.++++.|++.|++.+.++|...
T Consensus 122 ~~a~~~l~~~Ga~vv~~~vlid 143 (187)
T TIGR01367 122 LEAIRAIEGQGGQVVGLACIID 143 (187)
T ss_pred HHHHHHHHHcCCeEEEEEEEEE
Confidence 9999999999999999888544
No 42
>TIGR00336 pyrE orotate phosphoribosyltransferase. The conserved Lys (K) residue at position 101 of the seed alignment has been proposed as the active site for the enzyme.
Probab=99.11 E-value=7.2e-10 Score=97.10 Aligned_cols=106 Identities=18% Similarity=0.201 Sum_probs=75.9
Q ss_pred HHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc---------eEecCcee--eeeccCC-CCCCeEEEEecccc
Q 020692 169 IPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT---------VREGDKRI--VRIKEGN-PAGCHVVIVDDLVQ 236 (322)
Q Consensus 169 ~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~---------~r~~~k~~--~~~~~~~-v~g~~vlivDDii~ 236 (322)
...+++.+.+. .+.++|++|+.||+.+|..++..++. .|+..+.. .....+. .+|++|+||||+++
T Consensus 42 ~~~~~~~~~~~--~~~d~Ivg~~~gG~~~A~~la~~l~~~~~~~~~~~~rk~~k~~g~~~~~~g~~~~g~~VlIVDDvi~ 119 (173)
T TIGR00336 42 ARYAAAIIKSH--LEFDVIAGPALGGIPIATAVSVKLAKPGGDIPLCFNRKEAKDHGEGGNIEGELLEGDKVVVVEDVIT 119 (173)
T ss_pred HHHHHHHHHhc--CCCCEEEccccChHHHHHHHHHHhcCcCCCceEEEEcCCcccCCCCCceecCCCCCCEEEEEecccc
Confidence 34455555432 45789999999999999999877654 12221111 1122344 47999999999999
Q ss_pred ChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcc
Q 020692 237 SGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLK 276 (322)
Q Consensus 237 TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s 276 (322)
||+|+.++++.|++.|+..+.++|.-..-..++.+++.+.
T Consensus 120 TG~Tl~~a~~~l~~~Ga~v~~~~vlvdr~~~~~~~~l~~~ 159 (173)
T TIGR00336 120 TGTSILEAVEIIQAAGGQVAGVIIAVDRQERSAGQEFEKE 159 (173)
T ss_pred ChHHHHHHHHHHHHcCCeEEEEEEEEecCchhHHHHHHHh
Confidence 9999999999999999999998886544332467788765
No 43
>PRK07322 adenine phosphoribosyltransferase; Provisional
Probab=99.09 E-value=3.8e-10 Score=99.34 Aligned_cols=93 Identities=20% Similarity=0.268 Sum_probs=67.1
Q ss_pred HHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc----eEecCc---------e--e-------eeec----cCC
Q 020692 169 IPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT----VREGDK---------R--I-------VRIK----EGN 222 (322)
Q Consensus 169 ~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~~~k---------~--~-------~~~~----~~~ 222 (322)
...+++.+.+....+.++|++|+.||+.+|..++..++. .++..+ . . .... ..+
T Consensus 38 ~~~~~~~La~~l~~~~d~Iv~v~~gGiplA~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (178)
T PRK07322 38 TEAAAEALAKRLPTEVDVLVTPETKGIPLAHALSRRLGKPYVVARKSRKPYMQDPIIQEVVSITTGKPQLLVLDGADAEK 117 (178)
T ss_pred HHHHHHHHHHHcCCCCCEEEEeccCCHHHHHHHHHHHCCCEEEEEEeCCCCCCCceEEEEEEEEeccceEEEecCccccc
Confidence 334444444432224569999999999999999987776 222111 0 0 0001 124
Q ss_pred CCCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEE
Q 020692 223 PAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVT 261 (322)
Q Consensus 223 v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~t 261 (322)
++||+|+||||+++||+|+.++++.|++.||+.|.+++.
T Consensus 118 ~~gk~VLIVDDiitTG~Tl~aa~~~L~~~GA~~V~~~~v 156 (178)
T PRK07322 118 LKGKRVAIVDDVVSTGGTLTALERLVERAGGQVVAKAAI 156 (178)
T ss_pred cCCCEEEEEeccccccHHHHHHHHHHHHcCCEEEEEEEE
Confidence 689999999999999999999999999999999999884
No 44
>PRK00455 pyrE orotate phosphoribosyltransferase; Validated
Probab=99.09 E-value=1.1e-09 Score=98.10 Aligned_cols=107 Identities=21% Similarity=0.240 Sum_probs=77.6
Q ss_pred HHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc----eEecCce---eeeeccCCCCCCeEEEEeccccChHhH
Q 020692 169 IPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT----VREGDKR---IVRIKEGNPAGCHVVIVDDLVQSGGTL 241 (322)
Q Consensus 169 ~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~~~k~---~~~~~~~~v~g~~vlivDDii~TG~Tl 241 (322)
...+++.+.+. ..+.++|++|+.||+.+|..++..|+. .|+..+. .........+|++|+||||+++||+|+
T Consensus 51 ~~~la~~i~~~-~~~~d~Ivgi~~gG~~~A~~la~~L~~~~~~~rk~~~~~g~~~~~~~~~~~g~~VliVDDvi~tG~Tl 129 (202)
T PRK00455 51 GRFLAEAIKDS-GIEFDVVAGPATGGIPLAAAVARALDLPAIFVRKEAKDHGEGGQIEGRRLFGKRVLVVEDVITTGGSV 129 (202)
T ss_pred HHHHHHHHHhc-CCCCCEEEecccCcHHHHHHHHHHhCCCEEEEecccCCCCCCceEEccCCCCCEEEEEecccCCcHHH
Confidence 45566666543 125569999999999999999988876 2332111 111112245799999999999999999
Q ss_pred HHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhccc
Q 020692 242 IECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKN 277 (322)
Q Consensus 242 ~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~ 277 (322)
.++++.|++.|++.+.++|....- .+..+++++.+
T Consensus 130 ~~~~~~l~~~Ga~~v~~~vlv~~~-~~~~~~~~~~g 164 (202)
T PRK00455 130 LEAVEAIRAAGAEVVGVAVIVDRQ-SAAQEVFADAG 164 (202)
T ss_pred HHHHHHHHHcCCEEEEEEEEEECc-chHHHHHHhcC
Confidence 999999999999999999866542 34456666655
No 45
>PTZ00149 hypoxanthine phosphoribosyltransferase; Provisional
Probab=99.07 E-value=4.8e-10 Score=102.92 Aligned_cols=94 Identities=18% Similarity=0.231 Sum_probs=73.2
Q ss_pred hHHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc------------------eE---ecCce---e--e-eecc
Q 020692 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT------------------VR---EGDKR---I--V-RIKE 220 (322)
Q Consensus 168 ~~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~------------------~r---~~~k~---~--~-~~~~ 220 (322)
....||.+|.+.+..+++++++...||+.++..+.+.|.. ++ ..+.. . + ....
T Consensus 66 rI~~LA~~I~~dy~~~~~vilgILkGg~~FaadL~~~L~~~~~~~~~~~~~~~~~~dfi~vsSY~~~~s~g~v~i~~~~~ 145 (241)
T PTZ00149 66 RVEKLAYDIKQVYGNEELHILCILKGSRGFFSALVDYLNRIHNYSSTESPKPPYQEHYVRVKSYCNDESTGKLEIVSDDL 145 (241)
T ss_pred HHHHHHHHHHHHcCCCCeEEEEECCCCHHHHHHHHHHHhhhhhccccccCcccccccEEEEEEccCCCcCCceEEecccc
Confidence 4677888988766678899999999999999987765541 11 11110 1 1 1223
Q ss_pred CCCCCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEE
Q 020692 221 GNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVT 261 (322)
Q Consensus 221 ~~v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~t 261 (322)
.+++||+|+|||||++||.|+.++++.|++.|+++|.++|.
T Consensus 146 ~~l~gk~VLIVDDIidTG~Tl~~~~~~L~~~g~~~V~va~L 186 (241)
T PTZ00149 146 SCLKDKHVLIVEDIIDTGNTLVKFCEYLKKFEPKTIRIATL 186 (241)
T ss_pred cccCCCEEEEEEeEeChHHHHHHHHHHHHhcCCCEEEEEEE
Confidence 46899999999999999999999999999999999999984
No 46
>PTZ00271 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=99.06 E-value=7.7e-10 Score=99.82 Aligned_cols=98 Identities=16% Similarity=0.172 Sum_probs=74.9
Q ss_pred hHHHHHHHHhcCCC------CCCceEeccCCchHHHHHHHhccCC---c------e---EecC-ce---ee---eeccCC
Q 020692 168 GIPLLKQRLHQLPD------ANNIVIAFPDDGAWKRFHKMLDHFP---T------V---REGD-KR---IV---RIKEGN 222 (322)
Q Consensus 168 ~~~~la~~l~~~~~------~~~~vvV~Pd~Ga~~ra~~~a~~L~---~------~---r~~~-k~---~~---~~~~~~ 222 (322)
....||.+|.+.+. .+++++++...||+.+|..+.+.|+ . + +.++ .. .. .....+
T Consensus 36 ~i~~LA~~I~~~~~~~~~~~~~~~vivgVlkGg~~fa~dL~r~L~~~~~~~~vdfi~vssY~~~~~s~g~~~i~~~~~~~ 115 (211)
T PTZ00271 36 ATAKCAKKIAEDYRSFKLTTENPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASSYGTGVETSGQVRMLLDVRDS 115 (211)
T ss_pred HHHHHHHHHHHHhhhccccCCCCeEEEEEcCCCHHHHHHHHHHhcccCCCeeEEEEEEEecCCCCcccCceEEecCCCCC
Confidence 46778888877532 2467899999999999999987774 2 1 2221 11 11 123457
Q ss_pred CCCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcc
Q 020692 223 PAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKG 268 (322)
Q Consensus 223 v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~ 268 (322)
++||+|||||||++||.||.++.+.|++.|+++|.+++ ++.+.
T Consensus 116 i~gk~VLIVDDIvDTG~TL~~v~~~l~~~~p~svk~av---L~dK~ 158 (211)
T PTZ00271 116 VENRHILIVEDIVDSAITLQYLMRFMLAKKPASLKTVV---LLDKP 158 (211)
T ss_pred CCCCEEEEEecccCCHHHHHHHHHHHHhcCCCEEEEEE---EEEcc
Confidence 99999999999999999999999999999999999998 55553
No 47
>TIGR01744 XPRTase xanthine phosphoribosyltransferase. This model represent a xanthine-specific phosphoribosyltransferase of Bacillus subtilis and closely related proteins from other species, mostly from other Gram-positive bacteria. The adjacent gene is a xanthine transporter; B. subtilis can import xanthine for the purine salvage pathway or for catabolism to obtain nitrogen.
Probab=99.03 E-value=2.4e-09 Score=95.37 Aligned_cols=122 Identities=10% Similarity=-0.005 Sum_probs=85.1
Q ss_pred HHHHHHHHhcCC-CCCCceEeccCCchHHHHHHHhccCCc----eEecCceee-----e--------------eccC-CC
Q 020692 169 IPLLKQRLHQLP-DANNIVIAFPDDGAWKRFHKMLDHFPT----VREGDKRIV-----R--------------IKEG-NP 223 (322)
Q Consensus 169 ~~~la~~l~~~~-~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~~~k~~~-----~--------------~~~~-~v 223 (322)
...+++.+.+.+ +.+..+|++|+.+|+..|..+|..|++ .|+.++... . ...+ .+
T Consensus 35 l~~v~~~l~~~~~~~~~d~Vv~~ea~Gi~la~~lA~~Lg~p~v~vRK~~k~~~~~~~~~~~~~s~~~~~~~~l~i~~~~l 114 (191)
T TIGR01744 35 MQEVGEEFARRFADDGITKIVTIEASGIAPAIMTGLKLGVPVVFARKKKPLTLTDNLLTASVHSFTKQTTSTVAVSGEFL 114 (191)
T ss_pred HHHHHHHHHHHhccCCCCEEEEEccccHHHHHHHHHHHCCCEEEEEeCCCCCCCCcceEEEEEEeecCccEEEEEEHHhC
Confidence 344444444432 234578999999999999999988876 455432110 0 1122 23
Q ss_pred -CCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCc
Q 020692 224 -AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCP 295 (322)
Q Consensus 224 -~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~ 295 (322)
+|++|+||||+++||+|+.++++.+++.||.-+.++|.-..-..++.++|.+.++ + +..++.-+++.
T Consensus 115 ~~G~rVLIVDDvvtTGgT~~a~~~ll~~aGa~Vvgv~~lvd~~~~~g~~~l~~~gv---p--v~sL~~~~~l~ 182 (191)
T TIGR01744 115 SDQDRVLIIDDFLANGQAAHGLVDIAKQAGAKIAGIGIVIEKSFQNGRQELVELGY---R--VESLARIQSLE 182 (191)
T ss_pred CCcCEEEEEEehhccChHHHHHHHHHHHCCCEEEEEEEEEEecCccHHHHHHhcCC---c--EEEEEEEeeEe
Confidence 7999999999999999999999999999999988888544433456788876543 2 66666655554
No 48
>PRK09219 xanthine phosphoribosyltransferase; Validated
Probab=99.02 E-value=2.7e-09 Score=94.88 Aligned_cols=119 Identities=10% Similarity=0.015 Sum_probs=84.0
Q ss_pred HHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc----eEecCcee-----e-----e---------ecc-CCC-C
Q 020692 170 PLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT----VREGDKRI-----V-----R---------IKE-GNP-A 224 (322)
Q Consensus 170 ~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~~~k~~-----~-----~---------~~~-~~v-~ 224 (322)
..+++.+.. .+.++|++|+.+|+..|..+|..|++ .|+..+.. . . .+. ..+ +
T Consensus 40 ~~la~~~~~---~~~D~Ivg~e~~GiplA~~lA~~Lg~p~v~vRK~~k~~~~~~~~~~~~~~~~~~~~~~l~i~~~~i~~ 116 (189)
T PRK09219 40 KEFARRFKD---EGITKILTIEASGIAPAVMAALALGVPVVFAKKKKSLTLTDDVYTATVYSFTKQVTSTVSVSKKFLSE 116 (189)
T ss_pred HHHHHHhcc---CCCCEEEEEccccHHHHHHHHHHHCCCEEEEEECCCCCCCCceEEEEEeeeccCceEEEEEEhhhCCC
Confidence 344444432 34569999999999999999988877 35433210 0 0 011 122 7
Q ss_pred CCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcC
Q 020692 225 GCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPL 296 (322)
Q Consensus 225 g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~ 296 (322)
|++|+||||+++||+|+.++++.+++.|+.-+.++|.-..-..++.+++.+.++. +..++..+.++.
T Consensus 117 G~rVlIVDDviaTGgT~~a~~~lv~~aGa~vvgv~~lvd~~~~~g~~~l~~~g~~-----~~sl~~~~~~~~ 183 (189)
T PRK09219 117 GDRVLIIDDFLANGQAALGLIDIIEQAGAKVAGIGIVIEKSFQDGRKLLEEKGYR-----VESLARIASLEN 183 (189)
T ss_pred CCEEEEEeehhhcChHHHHHHHHHHHCCCEEEEEEEEEEccCccHHHHHHhcCCc-----EEEEEEeeeccC
Confidence 9999999999999999999999999999998888875433223567788765432 667777766665
No 49
>COG0856 Orotate phosphoribosyltransferase homologs [Nucleotide transport and metabolism]
Probab=98.98 E-value=9.5e-10 Score=94.78 Aligned_cols=92 Identities=17% Similarity=0.134 Sum_probs=73.3
Q ss_pred HHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc---e---EecCc-------eeeeeccCCCCCCeEEEEeccc
Q 020692 169 IPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT---V---REGDK-------RIVRIKEGNPAGCHVVIVDDLV 235 (322)
Q Consensus 169 ~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~---~---r~~~k-------~~~~~~~~~v~g~~vlivDDii 235 (322)
+..+++.+.+..+.+-+++|+....|++.|..+|..|++ + |+..+ ..++...+.+.||+|+||||++
T Consensus 72 s~am~Dm~m~~~~~evDvVvGIa~sGvPlAtmvA~elg~elaiY~PrK~~~de~~~~~G~iS~NFa~V~gK~cvIVDDvi 151 (203)
T COG0856 72 SEAMADMIMEKVSFEVDVVVGIAISGVPLATMVAYELGKELAIYHPRKHRKDEGAGKGGSISSNFASVEGKRCVIVDDVI 151 (203)
T ss_pred HHHHHHHHHHhccceeEEEEEEeecCccHHHHHHHHhCCceEEEecccccccccCCcCceeecccccccCceEEEEeccc
Confidence 566777443333567789999999999999999988887 1 21111 1234466789999999999999
Q ss_pred cChHhHHHHHHHHHHcCCCeEEEEE
Q 020692 236 QSGGTLIECQKVLAAHGAAKVSAYV 260 (322)
Q Consensus 236 ~TG~Tl~~~~~~L~~~Ga~~v~~~~ 260 (322)
|||.|+.++++.|+++|++.+-+.+
T Consensus 152 ttG~Ti~E~Ie~lke~g~kpv~v~V 176 (203)
T COG0856 152 TTGSTIKETIEQLKEEGGKPVLVVV 176 (203)
T ss_pred ccChhHHHHHHHHHHcCCCcEEEEE
Confidence 9999999999999999999988877
No 50
>PRK13810 orotate phosphoribosyltransferase; Provisional
Probab=98.97 E-value=4.9e-09 Score=93.04 Aligned_cols=104 Identities=17% Similarity=0.115 Sum_probs=77.8
Q ss_pred HHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc----eEecCceee--eeccCC-CCCCeEEEEeccccChHhHH
Q 020692 170 PLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT----VREGDKRIV--RIKEGN-PAGCHVVIVDDLVQSGGTLI 242 (322)
Q Consensus 170 ~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~~~k~~~--~~~~~~-v~g~~vlivDDii~TG~Tl~ 242 (322)
..+++.+.. .+.+.|++|..+|+..|..++..++. .|+..+... ....+. .+|++|+||||+++||+|+.
T Consensus 63 ~~la~~~~~---~~~d~I~g~~~~GiplA~~vA~~l~~p~v~vRK~~k~~g~~~~~~g~~~~g~rVlIVDDVitTGgS~~ 139 (187)
T PRK13810 63 RQAALRIKE---MDVDTVAGVELGGVPLATAVSLETGLPLLIVRKSVKDYGTGSRFVGDLKPEDRIVMLEDVTTSGGSVR 139 (187)
T ss_pred HHHHHHhcc---CCCCEEEEEccchHHHHHHHHHHhCCCEEEEecCCCccCCCceEEccCCCcCEEEEEEeccCCChHHH
Confidence 344444432 34578999999999999999887776 455433321 122344 47999999999999999999
Q ss_pred HHHHHHHHcCCCeEEEEEEeccCCcchHHHHhccc
Q 020692 243 ECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKN 277 (322)
Q Consensus 243 ~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~ 277 (322)
++++.+++.|+.-+.++|.-..- .++.++|.+.|
T Consensus 140 ~~i~~l~~~Ga~V~~v~vlvdr~-~g~~~~l~~~g 173 (187)
T PRK13810 140 EAIEVVREAGAYIKYVITVVDRE-EGAEENLKEAD 173 (187)
T ss_pred HHHHHHHHCCCEEEEEEEEEECC-cChHHHHHHcC
Confidence 99999999999988888865533 46788887765
No 51
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=98.96 E-value=2.9e-09 Score=95.93 Aligned_cols=93 Identities=18% Similarity=0.257 Sum_probs=75.7
Q ss_pred CCceEeccCCchHHHHHHHhccCCc--------eEecCc-e---eeeeccCCCCCCeEEEEeccccChHhHHHHHHHHHH
Q 020692 183 NNIVIAFPDDGAWKRFHKMLDHFPT--------VREGDK-R---IVRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAA 250 (322)
Q Consensus 183 ~~~vvV~Pd~Ga~~ra~~~a~~L~~--------~r~~~k-~---~~~~~~~~v~g~~vlivDDii~TG~Tl~~~~~~L~~ 250 (322)
++.++|+...||..++..+.+.++. .|.... . ....+..+++||+|+|+|||++||+|+..+++.|++
T Consensus 68 ~~i~~V~ILrgg~~~~~~l~~~l~~~~v~~i~~~r~~~t~~~~~~~~~lp~~i~~~~VllvDd~laTG~Tl~~ai~~L~~ 147 (207)
T TIGR01091 68 KKIVLVPILRAGLGMVDGVLKLIPEAKVGHVGAYRNEETLKPVPYYSKLPEDIDERTVIVLDPMLATGGTMIAALDLLKK 147 (207)
T ss_pred CcEEEEEEeCCcHHHHHHHHHhCCcCceeEEEEEeCCCCCCCEEEEecCCCCCCCCEEEEECCCccchHHHHHHHHHHHH
Confidence 4589999999999999999887764 121111 1 112345689999999999999999999999999999
Q ss_pred cCCCeEEEEEEeccCCcchHHHHhccc
Q 020692 251 HGAAKVSAYVTHGVFPKGSWERFTLKN 277 (322)
Q Consensus 251 ~Ga~~v~~~~tH~~~~~~a~~~l~~s~ 277 (322)
+|+++|.++|+ +.++.++++|.+..
T Consensus 148 ~G~~~I~v~~l--l~~~~gl~~l~~~~ 172 (207)
T TIGR01091 148 RGAKKIKVLSI--VAAPEGIEAVEKAH 172 (207)
T ss_pred cCCCEEEEEEE--ecCHHHHHHHHHHC
Confidence 99999999986 77889999998873
No 52
>COG0461 PyrE Orotate phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=98.87 E-value=2.1e-08 Score=89.56 Aligned_cols=96 Identities=24% Similarity=0.236 Sum_probs=71.0
Q ss_pred CCCceEeccCCchHHHHHHHhccCC----c--eEecCceee--eec-cCCCCCCeEEEEeccccChHhHHHHHHHHHHcC
Q 020692 182 ANNIVIAFPDDGAWKRFHKMLDHFP----T--VREGDKRIV--RIK-EGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHG 252 (322)
Q Consensus 182 ~~~~vvV~Pd~Ga~~ra~~~a~~L~----~--~r~~~k~~~--~~~-~~~v~g~~vlivDDii~TG~Tl~~~~~~L~~~G 252 (322)
.+.++|++|..||++.|..++..|. . .|+.-|..- ... .+..+|++|+||||++|||+++.++++.|+++|
T Consensus 60 ~~~d~v~G~a~ggiP~A~~~a~~l~~~~~~~~~Rke~K~hG~~~~ieG~~~~G~kVvvVEDViTTG~Si~eai~~l~~~G 139 (201)
T COG0461 60 LEFDVVAGPALGGIPLAAATALALAHLPPMAYVRKEAKDHGTGGLIEGGEVKGEKVVVVEDVITTGGSILEAVEALREAG 139 (201)
T ss_pred CCCcEEEeccccchHHHHHHHHHhccCCcEEEEeceeccCCCcceeEecCCCCCEEEEEEecccCCHhHHHHHHHHHHcC
Confidence 3577999999999999999987773 2 444322211 122 234589999999999999999999999999999
Q ss_pred CCeEEEEEEeccCCcchHHHHhcccC
Q 020692 253 AAKVSAYVTHGVFPKGSWERFTLKNG 278 (322)
Q Consensus 253 a~~v~~~~tH~~~~~~a~~~l~~s~~ 278 (322)
+.-+.++|.---- .++.+.+.+.++
T Consensus 140 ~~V~gv~~ivDR~-~~~~~~~~~~g~ 164 (201)
T COG0461 140 AEVVGVAVIVDRQ-SGAKEVLKEYGV 164 (201)
T ss_pred CeEEEEEEEEecc-hhHHHHHHhcCC
Confidence 9988887732221 355677777663
No 53
>PRK07272 amidophosphoribosyltransferase; Provisional
Probab=98.85 E-value=1.2e-08 Score=102.49 Aligned_cols=142 Identities=15% Similarity=0.147 Sum_probs=94.4
Q ss_pred HHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc------eEec--Cc-----------e----eeeeccCCCCC
Q 020692 169 IPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT------VREG--DK-----------R----IVRIKEGNPAG 225 (322)
Q Consensus 169 ~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~------~r~~--~k-----------~----~~~~~~~~v~g 225 (322)
-..++++|.+....+.++||+.-..+...|..+++.++. +|.. .+ . .+......++|
T Consensus 271 R~~lg~~La~~~~~~~D~VvpVPnqa~~lA~~la~~lgip~~~~lvk~~~~~rt~~~~~q~~R~~~vr~~f~~~~~~~~g 350 (484)
T PRK07272 271 RKRMGKRLAQEFPHDADIVIGVPNSSLSAASGYAEESGLPYEMGLVKNQYVARTFIQPTQELREQGVRMKLSAVSGVVKG 350 (484)
T ss_pred HHHHHHHHHhhcCCCCCEEEEecHHHHHHHHHHHHHHCCCcccCeEEEccCCccccCCCHHHHHHHHhhCccccccccCC
Confidence 356777776643233456665445677788877765543 2210 00 0 01123456899
Q ss_pred CeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCchhhhccCC
Q 020692 226 CHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKA 305 (322)
Q Consensus 226 ~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~~~~~~~~~ 305 (322)
|+|+||||+++||.|+.++++.|+++||++|.++++|+.+..+..--|.... .++++..+.-..........+
T Consensus 351 k~vllVDDvittG~T~~~~~~~L~~~Ga~~v~~~~~~p~~~~~c~ygid~~~-------~~~lia~~~~~~ei~~~~~~d 423 (484)
T PRK07272 351 KRVVMVDDSIVRGTTSRRIVQLLKEAGAKEVHVAIASPELKYPCFYGIDIQT-------RRELISANHSVEEICDIIGAD 423 (484)
T ss_pred CEEEEEccccCchHHHHHHHHHHHhcCCcEEEEEEeCCccccChhhhccCcC-------HHHHHhcCCCHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999888766665543 445554443222111122356
Q ss_pred CeEEEechHHHH
Q 020692 306 PFEVLSLAGSIA 317 (322)
Q Consensus 306 k~~~~~va~~la 317 (322)
-+.++|+..++.
T Consensus 424 sl~~~~~~~l~~ 435 (484)
T PRK07272 424 SLTYLSVDGLIE 435 (484)
T ss_pred EEEEecHHHHHH
Confidence 788888887764
No 54
>PRK06031 phosphoribosyltransferase; Provisional
Probab=98.84 E-value=3.6e-08 Score=90.34 Aligned_cols=121 Identities=15% Similarity=0.088 Sum_probs=81.0
Q ss_pred HHHHHHhcCC-CCCCceEeccCCchHHHHHHHhccCCc-----eEecCce-----------eee--------ec----cC
Q 020692 171 LLKQRLHQLP-DANNIVIAFPDDGAWKRFHKMLDHFPT-----VREGDKR-----------IVR--------IK----EG 221 (322)
Q Consensus 171 ~la~~l~~~~-~~~~~vvV~Pd~Ga~~ra~~~a~~L~~-----~r~~~k~-----------~~~--------~~----~~ 221 (322)
.+++.|.+.+ ..+.++||++..+|+..|..++..|+. .+..+|. ... .+ ..
T Consensus 71 ~la~~La~~~~~~~~DvIVgv~~~Gi~lA~~lA~~Lg~~~~vpl~~~rK~~~~~~l~~~~~sitt~~~~~~~~l~~~~~~ 150 (233)
T PRK06031 71 ALAEHLAEKARAFDPDVVAGLPTLGLTLAAAVARKLGHTRYVPLGTSRKFWYRDELSVPLSSITTPDQGKRLYIDPRMLP 150 (233)
T ss_pred HHHHHHHHHcccCCCcEEEEeccCCHHHHHHHHHHHCCCCceEEEEccccccccccccceeeeeccCccceEEecccccc
Confidence 3555554432 234679999999999999999988874 2221111 000 01 12
Q ss_pred CCCCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcC
Q 020692 222 NPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPL 296 (322)
Q Consensus 222 ~v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~ 296 (322)
.++|++|+||||+++||+|+.++++.|++.|++.+.+++.- .......++|.+.+- +--++++..-.+|.
T Consensus 151 ~~~GkrVLIVDDVitTG~Tl~aa~~lL~~~Ga~Vvgv~v~v-~~g~~~~~~l~~~~~----~~~~~~~~~~~~p~ 220 (233)
T PRK06031 151 LLEGRRVALIDDVISSGASIVAGLRLLAACGIEPAGIGAAM-LQSERWRESLAAAGP----QWPARVVGVFATPI 220 (233)
T ss_pred cCCCCEEEEEEeEccccHHHHHHHHHHHHcCCeEEEEEEEE-EccccHHHHHHhcCC----CcccceEEEeeccc
Confidence 36899999999999999999999999999999877766642 223566788887651 11246665555553
No 55
>PRK08558 adenine phosphoribosyltransferase; Provisional
Probab=98.82 E-value=3.2e-08 Score=91.03 Aligned_cols=106 Identities=16% Similarity=0.160 Sum_probs=74.3
Q ss_pred HHHHHHHHhcCC-CCCCceEeccCCchHHHHHHHhccCCc----eEecCc----eee-----------e---eccCC-CC
Q 020692 169 IPLLKQRLHQLP-DANNIVIAFPDDGAWKRFHKMLDHFPT----VREGDK----RIV-----------R---IKEGN-PA 224 (322)
Q Consensus 169 ~~~la~~l~~~~-~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~~~k----~~~-----------~---~~~~~-v~ 224 (322)
...+++.+.+.+ +.+.++|+++..+|+..|..++..|+. .|+..+ ..+ . ..... .+
T Consensus 96 ~~~v~~~la~~~~~~~~D~Vvtv~~~GI~lA~~lA~~L~~p~vi~Rk~~~~~~~~~v~~y~s~s~~~~~~~~l~~~~l~~ 175 (238)
T PRK08558 96 LRLIAPVVAERFMGLRVDVVLTAATDGIPLAVAIASYFGADLVYAKKSKETGVEKFYEEYQRLASGIEVTLYLPASALKK 175 (238)
T ss_pred HHHHHHHHHHHccCCCCCEEEEECcccHHHHHHHHHHHCcCEEEEEecCCCCCcceEEEeeccCCCceeEEEecHHHcCC
Confidence 334444444432 234578999999999999999998887 233211 000 0 01112 58
Q ss_pred CCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhc
Q 020692 225 GCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTL 275 (322)
Q Consensus 225 g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~ 275 (322)
|++|+||||+++||+|+..+++.++++||+.+.++|.-..- ..+.+++.+
T Consensus 176 G~rVLIVDDvi~TG~Tl~~~~~ll~~~ga~vvgv~vlv~~~-~~~~~~l~~ 225 (238)
T PRK08558 176 GDRVLIVDDIIRSGETQRALLDLARQAGADVVGVFFLIAVG-EVGIDRARE 225 (238)
T ss_pred cCEEEEEecccccCHHHHHHHHHHHHcCCEEEEEEEEEecC-chHHHHHhH
Confidence 99999999999999999999999999999999888854442 234677765
No 56
>PRK09123 amidophosphoribosyltransferase; Provisional
Probab=98.81 E-value=2.9e-08 Score=99.83 Aligned_cols=109 Identities=18% Similarity=0.144 Sum_probs=80.6
Q ss_pred HHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc------eEe--cC-----------ceeee----eccCCCCC
Q 020692 169 IPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT------VRE--GD-----------KRIVR----IKEGNPAG 225 (322)
Q Consensus 169 ~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~------~r~--~~-----------k~~~~----~~~~~v~g 225 (322)
...+++.|.+....+.+++|+.-.++...|..+++.++. +|. .+ +..++ .....++|
T Consensus 281 R~~~g~~La~~~~~~~D~Vv~VP~sg~~~A~~la~~lgip~~~~lir~~y~grt~i~~~q~~r~~~v~~k~~~~~~~~~g 360 (479)
T PRK09123 281 RKNIGRELARESPVDADVVVPVPDSGVPAAIGYAQESGIPFELGIIRNHYVGRTFIQPTQQIRNLGVKLKHNANRAVIEG 360 (479)
T ss_pred HHHHHHHHHHhCCCCCeEEEEcCccHHHHHHHHHHhcCCCeeheEEEEeecCccccccccccccccEEEEecccccccCC
Confidence 345666666543334567777777899999988876654 221 10 00111 12234789
Q ss_pred CeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEE-----EeccCCc---chHHHHhccc
Q 020692 226 CHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYV-----THGVFPK---GSWERFTLKN 277 (322)
Q Consensus 226 ~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~-----tH~~~~~---~a~~~l~~s~ 277 (322)
|+|+||||+++||.|+.++++.|+++||++|++.+ +|+.|.+ ++.++|..+.
T Consensus 361 k~vvlvDD~i~tG~Tl~~~~~~l~~~Ga~~v~~~~~~p~~~~~~~~gid~~~~~~l~~~~ 420 (479)
T PRK09123 361 KRVVLVDDSIVRGTTSRKIVQMLRDAGAKEVHLRIASPPITHPCFYGIDTPERSKLLAAT 420 (479)
T ss_pred CEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEEcCCCCccceeecCCCCCHHHHHHcC
Confidence 99999999999999999999999999999999999 9999998 8888887664
No 57
>COG1926 Predicted phosphoribosyltransferases [General function prediction only]
Probab=98.80 E-value=5.6e-08 Score=86.52 Aligned_cols=116 Identities=18% Similarity=0.199 Sum_probs=92.8
Q ss_pred hHHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc------eEecC---------------c-ee----------
Q 020692 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT------VREGD---------------K-RI---------- 215 (322)
Q Consensus 168 ~~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~------~r~~~---------------k-~~---------- 215 (322)
+-..||+.|......+++++.+.-.||++-+..+++.|+. +|+-+ . ..
T Consensus 10 AGr~La~~l~~~~~~~~~iVlaLpRGGvpva~evA~~lga~ldvliVrKiG~P~n~E~aiGAvae~g~~v~n~~~~~~~~ 89 (220)
T COG1926 10 AGRKLAQELAALRDLKDVIVLALPRGGVPVAFEVAQALGAPLDVLIVRKIGAPGNPELAIGAVAEGGDVVLNYDVVRSLG 89 (220)
T ss_pred HHHHHHHHHHhhccCCCcEEEEecCCCchHHHHHHHHhCCCeeEEEEeecCCCCCchhceeeeccCCcEecchhhhhhcc
Confidence 5677899998764457788999999999999999987765 23310 0 00
Q ss_pred e--------------e-----------eccCCCCCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchH
Q 020692 216 V--------------R-----------IKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSW 270 (322)
Q Consensus 216 ~--------------~-----------~~~~~v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~ 270 (322)
. + ....+.+||+||||||-+.||.|+..+++.++++|+++|.+++ +++++++.
T Consensus 90 i~~~~i~~~~~~e~~El~rrr~~yr~~~~~~~~~g~~VIlVDDGiATGatm~aAi~~~r~~~~~~IviAV--PV~p~~a~ 167 (220)
T COG1926 90 IDDAYIEAAAARERKELLRRREAYRGGRPVPSLKGRTVILVDDGIATGATMKAAVRALRAKGPKEIVIAV--PVAPEDAA 167 (220)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCEEEEEeCCcchhHHHHHHHHHHHhcCCceEEEEc--ccCCHHHH
Confidence 0 0 0123679999999999999999999999999999999999998 89999999
Q ss_pred HHHhcccCCCccCCcCEEEEecC
Q 020692 271 ERFTLKNGENMENAFANFWITDS 293 (322)
Q Consensus 271 ~~l~~s~~~g~~~~~~~iv~Tdt 293 (322)
+.|+.. .|+|+|-.+
T Consensus 168 ~~l~s~--------~D~vvc~~~ 182 (220)
T COG1926 168 AELESE--------ADEVVCLYM 182 (220)
T ss_pred HHHHhh--------cCeEEEEcC
Confidence 999887 589999876
No 58
>KOG1712 consensus Adenine phosphoribosyl transferases [Nucleotide transport and metabolism]
Probab=98.79 E-value=2e-08 Score=85.59 Aligned_cols=109 Identities=23% Similarity=0.224 Sum_probs=84.8
Q ss_pred hHHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc----eEecCce----------------eeeeccCCC-CCC
Q 020692 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT----VREGDKR----------------IVRIKEGNP-AGC 226 (322)
Q Consensus 168 ~~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~~~k~----------------~~~~~~~~v-~g~ 226 (322)
...++++++++..+.+..+|++.+..|.-+.-.+|-.++. +|+.+|. .++...+.+ .|.
T Consensus 44 lidlf~~h~~~~~~~~Id~iaGlEaRGFLFGP~iAlalG~~fVPiRK~gKLPG~~i~~~Y~lEYg~d~~Emq~~Ai~~g~ 123 (183)
T KOG1712|consen 44 LIDLFVDHYRETFEMKIDVIAGLEARGFLFGPSIALALGAGFVPIRKPGKLPGEVISESYELEYGEDRFEMQKGAIKPGQ 123 (183)
T ss_pred HHHHHHHHHHHHhcCcceEEEeeeecceecCcHHHHHhCCCeeecccCCCCCCceeEEEEeeecCccceeeeccccCCCC
Confidence 4677888888754445679999999999888877766665 4654442 111224455 489
Q ss_pred eEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcc
Q 020692 227 HVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLK 276 (322)
Q Consensus 227 ~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s 276 (322)
+|+||||++.||||+.+|.+.+.+.|+.-+.+.|+-.+-.-.+.++|..-
T Consensus 124 rvvvVDDllATGGTl~AA~~Ll~r~ga~vvE~~~vieL~~LkGr~kL~~~ 173 (183)
T KOG1712|consen 124 RVVVVDDLLATGGTLAAATELLERVGAEVVECACVIELPELKGREKLKGK 173 (183)
T ss_pred eEEEEechhhcCccHHHHHHHHHHhccEEEEEEEEEEccccCCccccCCC
Confidence 99999999999999999999999999999999998887666778888763
No 59
>PRK05500 bifunctional orotidine 5'-phosphate decarboxylase/orotate phosphoribosyltransferase protein; Validated
Probab=98.77 E-value=5.3e-08 Score=97.61 Aligned_cols=94 Identities=23% Similarity=0.206 Sum_probs=73.1
Q ss_pred CCceEeccCCchHHHHHHHhccCCc----eEecCcee--eeeccCCC-CCCeEEEEeccccChHhHHHHHHHHHHcCCCe
Q 020692 183 NNIVIAFPDDGAWKRFHKMLDHFPT----VREGDKRI--VRIKEGNP-AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAK 255 (322)
Q Consensus 183 ~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~~~k~~--~~~~~~~v-~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~ 255 (322)
+.+.|++|..||+..|..++..+++ .|+..|.. .....+.+ +|++|+||||++|||+|+.++++.|++.|++-
T Consensus 344 ~~D~I~Gia~gGiPlAt~lA~~lg~p~v~vRKe~K~~G~~~~ieG~~~~G~rVlIVDDViTTGgSi~eaie~l~~aG~~V 423 (477)
T PRK05500 344 TFDRIAGIPYGSLPTATGLALHLHHPMIFPRKEVKAHGTRRLIEGNFHPGETVVVVDDILITGKSVMEGAEKLKSAGLNV 423 (477)
T ss_pred CCCEEEEEccchHHHHHHHHHHhCCCEEEEecCcCccCCCceEecCCCCcCEEEEEEeccccCHHHHHHHHHHHHCCCEE
Confidence 4569999999999999999987776 45543322 11234554 79999999999999999999999999999998
Q ss_pred EEEEEEeccCCcchHHHHhccc
Q 020692 256 VSAYVTHGVFPKGSWERFTLKN 277 (322)
Q Consensus 256 v~~~~tH~~~~~~a~~~l~~s~ 277 (322)
+.++|.--.- .++.++|++.+
T Consensus 424 ~~v~vlVDR~-~g~~~~L~~~g 444 (477)
T PRK05500 424 RDIVVFIDHE-QGVKDKLQSHG 444 (477)
T ss_pred EEEEEEEECC-cchHHHHHhcC
Confidence 8888754432 36677887665
No 60
>PRK09246 amidophosphoribosyltransferase; Provisional
Probab=98.73 E-value=9.8e-08 Score=96.70 Aligned_cols=44 Identities=25% Similarity=0.240 Sum_probs=40.8
Q ss_pred cCCCCCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEec
Q 020692 220 EGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHG 263 (322)
Q Consensus 220 ~~~v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~ 263 (322)
...++||+|+||||++|||.|+.++++.|+++||++|+++++.+
T Consensus 353 ~~~v~gK~VlLVDDvitTGaTl~~~~~~L~~aGA~~V~v~v~ap 396 (501)
T PRK09246 353 RAEFKGKNVLLVDDSIVRGTTSEQIVQMAREAGAKKVYFASAAP 396 (501)
T ss_pred cccccCCeEEEEeccccccHHHHHHHHHHHHcCCCEEEEEEEcc
Confidence 44689999999999999999999999999999999999998754
No 61
>TIGR01743 purR_Bsub pur operon repressor, Bacillus subtilis type. This model represents the puring operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate.
Probab=98.73 E-value=8.7e-08 Score=89.37 Aligned_cols=114 Identities=15% Similarity=0.174 Sum_probs=80.9
Q ss_pred HHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc----eEecCce--------e--------e---eeccCC-CCC
Q 020692 170 PLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT----VREGDKR--------I--------V---RIKEGN-PAG 225 (322)
Q Consensus 170 ~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~~~k~--------~--------~---~~~~~~-v~g 225 (322)
..+++.+.. .+.++|++|..+|++.|..+|..|+. .|+..|. . . ...... .+|
T Consensus 118 ~~la~~~~~---~~iD~VvgvetkGIpLA~avA~~L~vp~vivRK~~K~t~g~~vs~nY~sgs~~~ie~m~l~k~~l~~G 194 (268)
T TIGR01743 118 KILASVFAE---REIDAVMTVATKGIPLAYAVASVLNVPLVIVRKDSKVTEGSTVSINYVSGSSNRIQTMSLAKRSLKTG 194 (268)
T ss_pred HHHHHHhcC---CCCCEEEEEccchHHHHHHHHHHHCCCEEEEEECCCCCCCCcEEEEEEcccCccceEEEEehhhCCCc
Confidence 344444432 34579999999999999999998887 4554432 0 0 001123 379
Q ss_pred CeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcC
Q 020692 226 CHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPL 296 (322)
Q Consensus 226 ~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~ 296 (322)
++|+||||+++||+|+..+++.+++.|+.-+.++|.-.. .+..+++... +-.++..+.+..
T Consensus 195 ~rVLIVDDv~~TGgTi~a~i~Ll~e~Ga~VvGv~vlve~--~~~~~~l~~~--------~~SL~~~~~~~~ 255 (268)
T TIGR01743 195 SKVLIIDDFMKAGGTINGMINLLDEFDAEVAGIGVLIDN--EGVDEKLVDD--------YMSLLTLSNINE 255 (268)
T ss_pred CEEEEEeeecccCHHHHHHHHHHHHCCCEEEEEEEEEEC--CCChHHcCCC--------ceEEEEEeeccc
Confidence 999999999999999999999999999998888875333 2345666443 567777766653
No 62
>PLN02440 amidophosphoribosyltransferase
Probab=98.71 E-value=8.8e-08 Score=96.50 Aligned_cols=93 Identities=17% Similarity=0.109 Sum_probs=64.6
Q ss_pred HHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc------eE--ecCc-----------e--eee--eccCCCCCC
Q 020692 170 PLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT------VR--EGDK-----------R--IVR--IKEGNPAGC 226 (322)
Q Consensus 170 ~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~------~r--~~~k-----------~--~~~--~~~~~v~g~ 226 (322)
..+++.|.+....+.++||+.-.++...|..++..++. +| ...+ . ..+ .....++||
T Consensus 262 ~~~g~~La~~~~~~~d~vvpVP~s~~~~A~~la~~lgiP~~~~lvr~ry~~rt~i~~~q~~r~~~~~~k~~~~~~~v~gk 341 (479)
T PLN02440 262 LEFGEILATEIPVDCDVVIPVPDSGRVAALGYAAKLGVPFQQGLIRSHYVGRTFIEPSQKIRDFSVKLKLNPVRSVLEGK 341 (479)
T ss_pred HHHHHHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHhCCCchhheEEEeeccccccCcchhhhhhhheeeeecccccccCc
Confidence 34556665543223445555555678888888876654 22 1100 0 111 122468999
Q ss_pred eEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEe
Q 020692 227 HVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTH 262 (322)
Q Consensus 227 ~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH 262 (322)
+|+||||+++||.|+.++++.|+++||++|.+++.-
T Consensus 342 ~VlLVDDiittGtTl~~i~~~L~~aGa~~V~v~v~~ 377 (479)
T PLN02440 342 RVVVVDDSIVRGTTSSKIVRMLREAGAKEVHMRIAS 377 (479)
T ss_pred eEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEEC
Confidence 999999999999999999999999999999998864
No 63
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=98.70 E-value=2.6e-08 Score=88.50 Aligned_cols=90 Identities=21% Similarity=0.174 Sum_probs=68.7
Q ss_pred hHHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc--e------EecC------ceee-eeccCC-CCCCeEEEE
Q 020692 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT--V------REGD------KRIV-RIKEGN-PAGCHVVIV 231 (322)
Q Consensus 168 ~~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~--~------r~~~------k~~~-~~~~~~-v~g~~vliv 231 (322)
.+..+|+.|.+. ++.++++|++..||+.-|+.+++.|+. + ...+ +..+ ....-+ +.||+||||
T Consensus 15 ~~~~lA~kI~~s-~~~PDvIiaiaRGG~~pariLsd~L~~~~l~~i~v~~y~~~~~~~~~~~v~~~~~~d~l~GkkVLIV 93 (192)
T COG2236 15 LCRALAEKIRAS-GFKPDVIVAIARGGLIPARILSDFLGVKPLYSIKVEHYDETAERDGEAKVKYPITIDPLSGKKVLIV 93 (192)
T ss_pred HHHHHHHHHHHc-CCCCCEEEEEcCCceehHHHHHHHhCCCceEEEEEEEehhhcccCCcceeecCccccccCCCeEEEE
Confidence 477899999754 578899999999999999999998876 1 1111 1111 122334 899999999
Q ss_pred eccccChHhHHHHHHHHHHcCCCeEEE
Q 020692 232 DDLVQSGGTLIECQKVLAAHGAAKVSA 258 (322)
Q Consensus 232 DDii~TG~Tl~~~~~~L~~~Ga~~v~~ 258 (322)
|||.+||.||..+.+.|++.....+..
T Consensus 94 DDI~DTG~Tl~~a~~~l~~~~p~e~rt 120 (192)
T COG2236 94 DDIVDTGETLELALEELKKLAPAEVRT 120 (192)
T ss_pred ecccCchHhHHHHHHHHHhhCchhhhh
Confidence 999999999999999999965555643
No 64
>PRK09213 pur operon repressor; Provisional
Probab=98.69 E-value=1.2e-07 Score=88.69 Aligned_cols=115 Identities=17% Similarity=0.175 Sum_probs=81.0
Q ss_pred HHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc----eEecCce----ee------------e---eccCCC-CC
Q 020692 170 PLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT----VREGDKR----IV------------R---IKEGNP-AG 225 (322)
Q Consensus 170 ~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~~~k~----~~------------~---~~~~~v-~g 225 (322)
..+++.+.. .+.++|++|..+|++.|..+|..|++ .|+..|. .+ . .....+ +|
T Consensus 120 ~~la~~~~~---~~iD~Vvtvet~GIplA~~vA~~L~vp~vivRK~~K~~~G~~vs~~y~sgs~~~ie~m~L~~~~l~~G 196 (271)
T PRK09213 120 RIIASAFAD---KKIDAVMTVETKGIPLAYAVANYLNVPFVIVRRDSKVTEGSTVSINYVSGSSKRIETMSLSKRSLKEG 196 (271)
T ss_pred HHHHHHhcc---cCCCEEEEEccccHHHHHHHHHHHCCCEEEEEECCCCCCCCcEEEEEEecccccceEEEEeHhhcCCc
Confidence 444444432 34579999999999999999998887 4554431 00 0 001123 79
Q ss_pred CeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCc
Q 020692 226 CHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLT 297 (322)
Q Consensus 226 ~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~ 297 (322)
++|+||||+++||+|+..+++.+++.|+.-+.+++.-..- +..+++... +..++..+.+...
T Consensus 197 ~rVLIVDDv~~TGgTi~a~i~Ll~e~Ga~VvGv~vlVd~~--~~~~~l~~~--------~~SL~~~~~vd~~ 258 (271)
T PRK09213 197 SRVLIVDDFMKAGGTINGMISLLKEFDAEVVGIGVLVETK--EPEERLVDD--------YVSLLKLSEVDEK 258 (271)
T ss_pred CEEEEEeeecccCHhHHHHHHHHHHCCCEEEEEEEEEECC--CChhhcCCc--------eEEEEEEehhccc
Confidence 9999999999999999999999999999988888754432 334555432 5678877766543
No 65
>TIGR01134 purF amidophosphoribosyltransferase. Alternate name: glutamine phosphoribosylpyrophosphate (PRPP) amidotransferase.
Probab=98.66 E-value=9.5e-08 Score=95.41 Aligned_cols=133 Identities=17% Similarity=0.107 Sum_probs=80.4
Q ss_pred EEeeccCCCCccchhccCCCcc-c-HHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchHHHHHHHHh
Q 020692 100 TLVLPFFPTGSFERMEEEGDVA-T-AFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLH 177 (322)
Q Consensus 100 ~~viPY~~YsRqdr~~~~ge~~-s-ak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~~~la~~l~ 177 (322)
..+.-|..++|-|..+. |..+ . -+-+++.|+... ...+|.|++||.|.. .++..+++.+.
T Consensus 235 ~c~fe~vYfarpds~~~-g~~v~~~R~~~g~~La~~~--~~~~D~Vv~VP~sg~---------------~~A~~la~~lg 296 (442)
T TIGR01134 235 PCIFEYVYFARPDSVID-GISVYKARKRMGEKLARES--PVEADVVIPVPDSGR---------------SAALGFAQASG 296 (442)
T ss_pred ceEEEEEEecCCcceEC-CeEHHHHHHHHHHHHHHhc--CCCCEEEEEccCCHH---------------HHHHHHHHHhC
Confidence 57888999999998775 5443 2 223455554321 135799999999852 23555666553
Q ss_pred cCCCCCCceEeccCCchHHHHHHHhccC--Cc--eEecC-ceeeeeccCCCCCCeEEEEeccccChHhHHHHHHHHHHcC
Q 020692 178 QLPDANNIVIAFPDDGAWKRFHKMLDHF--PT--VREGD-KRIVRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHG 252 (322)
Q Consensus 178 ~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L--~~--~r~~~-k~~~~~~~~~v~g~~vlivDDii~TG~Tl~~~~~~L~~~G 252 (322)
-. ... ++.+-+...+.+ .. .|... +.........++||+|+||||+++||.|+.++++.|++.|
T Consensus 297 ip--~~~---------~l~r~~~~~r~~i~~~q~~R~~~v~~k~~~~~~~~~gk~v~lvDD~ittG~T~~~~~~~l~~~g 365 (442)
T TIGR01134 297 IP--YRE---------GLIKNRYVGRTFIMPTQELRELSVRLKLNPIREVFRGKRVVLVDDSIVRGTTSRQIVKMLRDAG 365 (442)
T ss_pred CC--chH---------HeEEeccccccccCCCHHHHHHHHhhhcccccccCCCCEEEEEeccccccHHHHHHHHHHHHcC
Confidence 21 111 111100000111 00 01000 0111123456899999999999999999999999999999
Q ss_pred CCeEEEEEE
Q 020692 253 AAKVSAYVT 261 (322)
Q Consensus 253 a~~v~~~~t 261 (322)
|++|.+++.
T Consensus 366 a~~v~~~~~ 374 (442)
T TIGR01134 366 AKEVHVRIA 374 (442)
T ss_pred CcEEEEEEc
Confidence 999998775
No 66
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=98.63 E-value=1e-07 Score=82.23 Aligned_cols=81 Identities=20% Similarity=0.210 Sum_probs=60.1
Q ss_pred hHHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc-----e---EecCce--eeee-ccCCCCCCeEEEEecccc
Q 020692 168 GIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT-----V---REGDKR--IVRI-KEGNPAGCHVVIVDDLVQ 236 (322)
Q Consensus 168 ~~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~-----~---r~~~k~--~~~~-~~~~v~g~~vlivDDii~ 236 (322)
....+|+.|.+. .+.+++|++..||+.+|..++..|+. + +...+. .... .....+||+|+||||+++
T Consensus 18 ~i~~la~~I~~~--~~~d~vvgv~~GG~~fa~~L~~~L~~~~v~~i~~ssY~~~~~~~~~~~~~~~~~gk~VLIVDDIiD 95 (156)
T PRK09177 18 DARALAWRLLPA--GQWKGIIAVTRGGLVPAAILARELGIRLVDTVCISSYDHDNQGELKVLKRAEGDGEGFLVVDDLVD 95 (156)
T ss_pred HHHHHHHHHHhh--CCCCEEEEEecCCeehHHHHHHHcCCCceeEEEEEEECCCcCCcEEEecCCCcCcCEEEEEeeeeC
Confidence 466778888654 25689999999999999999988875 1 121111 1111 122468999999999999
Q ss_pred ChHhHHHHHHHHHH
Q 020692 237 SGGTLIECQKVLAA 250 (322)
Q Consensus 237 TG~Tl~~~~~~L~~ 250 (322)
||+|+..+.+.+++
T Consensus 96 TG~Tl~~v~~~l~~ 109 (156)
T PRK09177 96 TGGTARAVREMYPK 109 (156)
T ss_pred CHHHHHHHHHHHhh
Confidence 99999999999874
No 67
>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]
Probab=98.61 E-value=2.4e-07 Score=81.73 Aligned_cols=104 Identities=21% Similarity=0.199 Sum_probs=75.1
Q ss_pred HHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc----eEecCcee----------------eeeccCCC-CCCe
Q 020692 169 IPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT----VREGDKRI----------------VRIKEGNP-AGCH 227 (322)
Q Consensus 169 ~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~~~k~~----------------~~~~~~~v-~g~~ 227 (322)
...+++.+.. .+...||+|..+|+..|..+|..|+. .|+..+.- .......+ +|++
T Consensus 42 i~~~~~~~~~---~~id~Iv~iea~Gi~~a~~vA~~Lgvp~v~vRK~~kl~~~~~~~~~~~~~~~~~l~~~~~~l~~G~r 118 (179)
T COG0503 42 IDELAERYKD---DGIDKIVTIEARGIPLAAAVALELGVPFVPVRKKGKLPEESVVETYYLEYGSETLELHKDALKPGDR 118 (179)
T ss_pred HHHHHHHhcc---cCCCEEEEEccccchhHHHHHHHhCCCEEEEEecCCCCCcceeEEEEEeccceEEEEEhhhCCCCCE
Confidence 3456666554 24569999999999999999999886 35433210 00111222 6999
Q ss_pred EEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhc
Q 020692 228 VVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTL 275 (322)
Q Consensus 228 vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~ 275 (322)
|+||||+++||+|+..+.+++.+.|+.-+.+.+.-..-..+...++..
T Consensus 119 VlIVDDllaTGgT~~a~~~Ll~~~ga~vvg~~~~ie~~~~~gr~~l~~ 166 (179)
T COG0503 119 VLIVDDLLATGGTALALIELLEQAGAEVVGAAFVIELGELDGRKKLED 166 (179)
T ss_pred EEEEecchhcChHHHHHHHHHHHCCCEEEEEEEEEEcCccccchhhcc
Confidence 999999999999999999999999999999988655444444444444
No 68
>PRK07631 amidophosphoribosyltransferase; Provisional
Probab=98.58 E-value=4.4e-07 Score=91.18 Aligned_cols=133 Identities=13% Similarity=0.012 Sum_probs=79.5
Q ss_pred EEeeccCCCCccchhccCCCcc--cHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchHHHHHHHHh
Q 020692 100 TLVLPFFPTGSFERMEEEGDVA--TAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLH 177 (322)
Q Consensus 100 ~~viPY~~YsRqdr~~~~ge~~--sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~~~la~~l~ 177 (322)
..+.-|.-++|-|-.+. |..+ .-+-+++.|+.-. ...+|.|++||.|+.- .+..+++.+.
T Consensus 245 ~C~fE~iYfarpdS~~~-g~~vy~~R~~~G~~La~~~--~~~~D~VvpVP~s~~~---------------~A~gla~~~g 306 (475)
T PRK07631 245 ICSMEYIYFARPDSNVD-GINVHTARKNLGKRLALEA--PVEADVVTGVPDSSIS---------------AAIGYAEATG 306 (475)
T ss_pred cceEEEEEeecCCcccC-CeEHHHHHHHHHHHHHhhC--CCCCcEEEEechhHHH---------------HHHHHHHHHC
Confidence 36777888888886664 5553 2334666665311 2357999999987631 1233333332
Q ss_pred cCCCCCCceEeccC-------CchHHHHHHHhccCCceEecCceeeeeccCCCCCCeEEEEeccccChHhHHHHHHHHHH
Q 020692 178 QLPDANNIVIAFPD-------DGAWKRFHKMLDHFPTVREGDKRIVRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAA 250 (322)
Q Consensus 178 ~~~~~~~~vvV~Pd-------~Ga~~ra~~~a~~L~~~r~~~k~~~~~~~~~v~g~~vlivDDii~TG~Tl~~~~~~L~~ 250 (322)
-. ....++--.. .+...|-..+... +....+.++||+|+||||+++||.|+.++++.|++
T Consensus 307 ip--~~~~lik~~~~~Rt~i~~~~~~R~~nv~~~-----------f~~~~~~v~gk~VlLVDDsittGtTl~~~~~~L~~ 373 (475)
T PRK07631 307 IP--YELGLIKNRYVGRTFIQPSQALREQGVKMK-----------LSPVRGVVEGKRVVMVDDSIVRGTTSRRIVTMLRE 373 (475)
T ss_pred CC--cccceEEEecCCCCCcCCCHHHHHHHHhhh-----------hhhcccccCCceEEEEeeeeccHHHHHHHHHHHHH
Confidence 11 1111111000 0011121111111 11234568999999999999999999999999999
Q ss_pred cCCCeEEEEEEec
Q 020692 251 HGAAKVSAYVTHG 263 (322)
Q Consensus 251 ~Ga~~v~~~~tH~ 263 (322)
+||++|++....+
T Consensus 374 aGA~eV~v~~~sP 386 (475)
T PRK07631 374 AGATEVHVRISSP 386 (475)
T ss_pred cCCCEEEEEEeCC
Confidence 9999999987644
No 69
>PRK06388 amidophosphoribosyltransferase; Provisional
Probab=98.52 E-value=2.5e-07 Score=92.92 Aligned_cols=134 Identities=13% Similarity=0.049 Sum_probs=79.5
Q ss_pred EeeccCCCCccchhccCCCcc--cHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchHHHHHHHHhc
Q 020692 101 LVLPFFPTGSFERMEEEGDVA--TAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLHQ 178 (322)
Q Consensus 101 ~viPY~~YsRqdr~~~~ge~~--sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~~~la~~l~~ 178 (322)
.+.-|.-++|-|-.+. |..+ .-+-+++.|.... ...+|.|++||.|.. +++..+++.+.-
T Consensus 254 C~fE~iYfarpds~~~-g~~vy~~R~~~G~~La~~~--~~~~D~VvpVP~s~~---------------~~A~g~a~~~gi 315 (474)
T PRK06388 254 CMFEYVYFSRPDSIID-GINVYQARVRMGMRLAKES--PVEADVVVPVPDSGR---------------SQAIGFSMASGI 315 (474)
T ss_pred ceEEEEeecCCccccC-CcHHHHHHHHHHHHHHhhc--cCCCcEEEeeCCCcH---------------HHHHHHHHHhCC
Confidence 5666777788887654 5443 2334666665421 235789999999973 133444444322
Q ss_pred CCCCCCceEeccCCchHHHHHHHhccCCc----eEecC-ceeeeeccCCCCCCeEEEEeccccChHhHHHHHHHHHHcCC
Q 020692 179 LPDANNIVIAFPDDGAWKRFHKMLDHFPT----VREGD-KRIVRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGA 253 (322)
Q Consensus 179 ~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~----~r~~~-k~~~~~~~~~v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga 253 (322)
. ... ++.|.+...+.+.. .|... +.........++||+|+||||+++||.|+.++++.|+++||
T Consensus 316 p--~~~---------~L~r~r~~~r~fi~~~q~~R~~~~~~kl~~~~~~i~gk~VlLVDDsittGtTl~~~~~~L~~aGa 384 (474)
T PRK06388 316 P--YTE---------GLIKNRYSERTFIMPTQSDRKAAIKLKLNPIREVISGKRIVLVDDSIVRGNTMRFIVKIMRKYGA 384 (474)
T ss_pred C--chh---------heEEecccCCcccCCchhhhhhceeEEeccccccccCceEEEEeCeECcHHHHHHHHHHHHHcCC
Confidence 1 111 12222222221111 01110 00111223457899999999999999999999999999999
Q ss_pred CeEEEEEEec
Q 020692 254 AKVSAYVTHG 263 (322)
Q Consensus 254 ~~v~~~~tH~ 263 (322)
++|.+....+
T Consensus 385 k~V~~ri~sP 394 (474)
T PRK06388 385 KEVHVRIGSP 394 (474)
T ss_pred CEEEEEeCCC
Confidence 9999876543
No 70
>PRK08341 amidophosphoribosyltransferase; Provisional
Probab=98.50 E-value=4.4e-07 Score=90.48 Aligned_cols=93 Identities=23% Similarity=0.252 Sum_probs=64.7
Q ss_pred HHHHHHHhcCCCC-CCceEeccCCchHHHHHHHhccCCc------eEecC----------c-ee--e--eeccCCCCCCe
Q 020692 170 PLLKQRLHQLPDA-NNIVIAFPDDGAWKRFHKMLDHFPT------VREGD----------K-RI--V--RIKEGNPAGCH 227 (322)
Q Consensus 170 ~~la~~l~~~~~~-~~~vvV~Pd~Ga~~ra~~~a~~L~~------~r~~~----------k-~~--~--~~~~~~v~g~~ 227 (322)
..+++.|.+.... .+.++..||.|. ..|..++..++. +|..- + .. . ......++||+
T Consensus 258 ~~~G~~La~~~~~~~D~Vv~VPdsg~-~~A~~~a~~lgip~~~~l~k~r~~~rtfi~~~qr~~~~~~k~~~~~~~v~gk~ 336 (442)
T PRK08341 258 YRMGVELARESPAEGDVVIAVPDSGR-TAALGFAHESGIPYMEGLIKNRYIGRTFIMPSGRELKVKLKLSPVREVINGKR 336 (442)
T ss_pred HHHHHHhhcccCCCCceEEEecCchH-HHHHHHHHHhCCCchheEEEeccccccccCcCchhhhheeeecccccccCCCE
Confidence 3466777654322 345677788666 577777776554 22110 0 00 1 12345689999
Q ss_pred EEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEec
Q 020692 228 VVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHG 263 (322)
Q Consensus 228 vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~ 263 (322)
|+||||+++||.|+.++++.|+++||++|.+.+..+
T Consensus 337 VlLVDD~IttGtTl~~~~~~L~~aGAk~V~~~~~sp 372 (442)
T PRK08341 337 VVLVDDSIVRGTTMKRIVKMLRDAGAREVHVRIASP 372 (442)
T ss_pred EEEEeeeeccHHHHHHHHHHHHhcCCcEEEEEEcCC
Confidence 999999999999999999999999999999976543
No 71
>PRK07349 amidophosphoribosyltransferase; Provisional
Probab=98.49 E-value=5.6e-07 Score=90.90 Aligned_cols=92 Identities=18% Similarity=0.152 Sum_probs=66.2
Q ss_pred HHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc------eEe--cCc-----------e--eee--eccCCCCC
Q 020692 169 IPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT------VRE--GDK-----------R--IVR--IKEGNPAG 225 (322)
Q Consensus 169 ~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~------~r~--~~k-----------~--~~~--~~~~~v~g 225 (322)
-..++++|.+....+.++||+.-.+|+..|..++..++. +|. .++ . +.+ .....++|
T Consensus 298 R~~~G~~La~~~~~~~DvVv~VP~sg~~~A~g~A~~lgip~~~~L~r~~y~grtfi~p~q~~R~~~~~~kl~~~~~~~~g 377 (500)
T PRK07349 298 RQRLGQQLAKESPVDADLVIGVPDSGIPAAIGFSQASGIPYAEGLIKNRYVGRTFIQPTQSMRESGIRMKLNPLKDVLAG 377 (500)
T ss_pred HHHHHHHHhhhcccCCcEEEEeccccHHHHHHHHHHHCCCchhceEEEeccCccccCCCHHHHHhhhheeeeccccccCC
Confidence 345777886654445567777767788888888876554 121 100 0 011 12445789
Q ss_pred CeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEE
Q 020692 226 CHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYV 260 (322)
Q Consensus 226 ~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~ 260 (322)
|+|+||||+++||.|+.++++.|+++||++|++..
T Consensus 378 krVlLVDDvIttGtTl~~~~~~Lr~aGAkeV~~~i 412 (500)
T PRK07349 378 KRIIIVDDSIVRGTTSRKIVKALRDAGATEVHMRI 412 (500)
T ss_pred CEEEEEeceeCCcHHHHHHHHHHHHhCCeEEEEEe
Confidence 99999999999999999999999999999998874
No 72
>PRK06781 amidophosphoribosyltransferase; Provisional
Probab=98.42 E-value=9.2e-07 Score=88.88 Aligned_cols=94 Identities=17% Similarity=0.164 Sum_probs=63.7
Q ss_pred HHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc------eEec--C-c-------e-------eeeeccCCCCCC
Q 020692 170 PLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT------VREG--D-K-------R-------IVRIKEGNPAGC 226 (322)
Q Consensus 170 ~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~------~r~~--~-k-------~-------~~~~~~~~v~g~ 226 (322)
..+.+.|.+....+.++|++.-..+...|..++..++. +|.. . . . .+......++||
T Consensus 270 ~~~G~~La~~~~~~~D~vv~VP~s~~~~A~~~a~~~gip~~~~lik~~~~~rt~~~~~~~~R~~~v~~~f~~~~~~i~gk 349 (471)
T PRK06781 270 KNMGKRLAAEAPIEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQELREQGVKMKLSAVRGVVEGK 349 (471)
T ss_pred HHHHHHHhhhCCCCCcEEEEcChhHHHHHHHHHHHhCCCcccceEEEccCCCCCcCCCHHHHHHHHhcceeccccccCCc
Confidence 34666776643334445555434566667777765543 2211 0 0 0 111234568999
Q ss_pred eEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEec
Q 020692 227 HVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHG 263 (322)
Q Consensus 227 ~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~ 263 (322)
+|+||||+++||.|+.++++.|+++||++|+++...+
T Consensus 350 ~VlLVDDvittGtTl~~~~~~Lk~aGA~eV~v~i~sP 386 (471)
T PRK06781 350 RVVMIDDSIVRGTTSKRIVRMLREAGATEVHVRIASP 386 (471)
T ss_pred eEEEEeceeccchHHHHHHHHHHHcCCcEEEEEECCC
Confidence 9999999999999999999999999999999987644
No 73
>KOG3367 consensus Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=98.37 E-value=9.1e-07 Score=76.32 Aligned_cols=100 Identities=19% Similarity=0.303 Sum_probs=75.4
Q ss_pred chHHHHHHHHhcCCCCCCceEeccCCchHHHHHHHhccCCc-------------eEec---Ccee---eeecc----CCC
Q 020692 167 TGIPLLKQRLHQLPDANNIVIAFPDDGAWKRFHKMLDHFPT-------------VREG---DKRI---VRIKE----GNP 223 (322)
Q Consensus 167 ~~~~~la~~l~~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~-------------~r~~---~k~~---~~~~~----~~v 223 (322)
...+.||+-+.+..+..+.++++..+||.++..++.++|.. +|.. +... +.... .++
T Consensus 44 dr~~rlakDi~~~~g~~~i~~lcVlkG~ykF~adLve~l~n~~s~~~~pmtvDFIR~kSY~n~~stg~iqiig~d~l~~l 123 (216)
T KOG3367|consen 44 DRVERLAKDIMKEIGNKPIIFLCVLKGGYKFFADLVERLKNRNSDRPLPMTVDFIRAKSYCNDQSTGDIQIIGGDDLSTL 123 (216)
T ss_pred hHHHHhhhhhhhccCCCceEEEEEecchhHHHHHHHHHHhhcccCCCcceeeeeeehhhhcCCcccCCceeecCCCHHHh
Confidence 34677888887766667788999999999999888776432 2221 1111 11222 357
Q ss_pred CCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcch
Q 020692 224 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGS 269 (322)
Q Consensus 224 ~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a 269 (322)
.||+|+|||||++||.||......+++.+++.|.++. ++.+..
T Consensus 124 tgK~VliVeDIvdTGrTl~~Lls~~~~~k~~~v~vas---LL~Krt 166 (216)
T KOG3367|consen 124 TGKNVLIVEDIVDTGRTLSTLLSHMKAYKPSMVKVAS---LLVKRT 166 (216)
T ss_pred cCCcEEEEEeeccccchHHHHHHHHHhcCccceeeee---eccccc
Confidence 9999999999999999999999999999999999987 666543
No 74
>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase. In some systems, close homologs lacking enzymatic activity exist and perform regulatory functions. The model is designated subfamily rather than equivalog for this reason.
Probab=98.33 E-value=1.7e-05 Score=75.75 Aligned_cols=138 Identities=16% Similarity=0.132 Sum_probs=101.8
Q ss_pred CCcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeee-CCCceeEEeccCCCCCCCeEEEEEecCCchhHHHHHHHHHHhh
Q 020692 14 KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNF-ADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALP 92 (322)
Q Consensus 14 ~~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~F-pdGE~~v~v~~~~~v~g~dv~iv~s~~~~~~l~elll~~~a~~ 92 (322)
+..+.+=+..+...+|..+|+.|| .++..+...++ ++||... ..+.++++|++|+|+.++.+... .++..+++++
T Consensus 159 ~~~viv~pd~g~~~~A~~lA~~Lg-~~~~~i~k~r~~~~~~~~~-~~~~~~v~g~~vliVDDii~tG~--Tl~~a~~~l~ 234 (308)
T TIGR01251 159 DNPVVVSPDAGGVERAKKVADALG-CPLAIIDKRRISATNEVEV-MNLVGDVEGKDVVIVDDIIDTGG--TIAKAAEILK 234 (308)
T ss_pred CCCEEEEECCchHHHHHHHHHHhC-CCEEEEEEEecCCCCEEEE-EecccccCCCEEEEEccccCCHH--HHHHHHHHHH
Confidence 345555555567789999999997 99999999999 8887443 34467899999999999988755 4556789999
Q ss_pred hcCccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchHHHH
Q 020692 93 RLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLL 172 (322)
Q Consensus 93 ~~~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~~~l 172 (322)
+.|+++|.++.++-- ++...+.++.++ ++|+|++.|.|... .+|. ++..+ +.+++|
T Consensus 235 ~~ga~~v~~~~th~v-------------~~~~a~~~l~~~------~~~~iv~tdt~~~~--~~~~-~~~~v--~va~~l 290 (308)
T TIGR01251 235 SAGAKRVIAAATHGV-------------FSGPAIERIANA------GVEEVIVTNTIPHE--KHKP-KVSVI--SVAPLI 290 (308)
T ss_pred hcCCCEEEEEEEeee-------------cCcHHHHHHHhC------CCCEEEEeCCCCcc--ccCC-CcEEE--EhHHHH
Confidence 999999999998411 111234566653 68999999999753 2333 34433 578999
Q ss_pred HHHHhcC
Q 020692 173 KQRLHQL 179 (322)
Q Consensus 173 a~~l~~~ 179 (322)
|+.|.+.
T Consensus 291 a~~i~~~ 297 (308)
T TIGR01251 291 AEAIRRI 297 (308)
T ss_pred HHHHHHH
Confidence 9999775
No 75
>PRK07847 amidophosphoribosyltransferase; Provisional
Probab=98.33 E-value=8.8e-07 Score=89.69 Aligned_cols=135 Identities=14% Similarity=0.039 Sum_probs=81.0
Q ss_pred EEeeccCCCCccchhccCCCcc--cHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchHHHHHHHHh
Q 020692 100 TLVLPFFPTGSFERMEEEGDVA--TAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQRLH 177 (322)
Q Consensus 100 ~~viPY~~YsRqdr~~~~ge~~--sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~~~la~~l~ 177 (322)
..+.-|.-++|-|-.+. |..+ .-+-+++.|..-. ...+|.|++||.| |+ +++..+|+.+.
T Consensus 264 ~C~fE~vYfarpdS~~~-g~~v~~~R~~~G~~La~~~--~~~~D~VvpVP~s-----G~----------~~A~g~a~~~g 325 (510)
T PRK07847 264 GCVFEYVYLARPDTTIA-GRSVHAARVEIGRRLAREH--PVEADLVIPVPES-----GT----------PAAVGYAQESG 325 (510)
T ss_pred CCeEEEEEecCCcceeC-CeEHHHHHHHHHHHHHhhC--CCCCeEEEeccCc-----hH----------HHHHHHHHHhC
Confidence 36778888888887665 5554 2334566665321 2357899999987 33 35666666654
Q ss_pred cCCCCCCceEeccCCchHHHHHHHhccCCc--e--EecC-ceeeeeccCCCCCCeEEEEeccccChHhHHHHHHHHHHcC
Q 020692 178 QLPDANNIVIAFPDDGAWKRFHKMLDHFPT--V--REGD-KRIVRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHG 252 (322)
Q Consensus 178 ~~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~--~--r~~~-k~~~~~~~~~v~g~~vlivDDii~TG~Tl~~~~~~L~~~G 252 (322)
-. .... +.|.+.....+.. + |... +.........++||+|+||||+++||.|+.++++.|+++|
T Consensus 326 ip--~~~~---------l~kn~~~grtfi~~~q~~r~~~~r~k~~~~~~~~~gk~vllVDD~ittG~T~~~~~~~L~~~g 394 (510)
T PRK07847 326 IP--FGQG---------LVKNAYVGRTFIQPSQTIRQLGIRLKLNPLREVIRGKRLVVVDDSIVRGNTQRALVRMLREAG 394 (510)
T ss_pred CC--hhhc---------eEeecccccCccCcchhhhhhceeeecCccccccCCCEEEEEecccCchHHHHHHHHHHHHcC
Confidence 32 1111 1111111110000 0 1000 0001122345799999999999999999999999999999
Q ss_pred CCeEEEEEEec
Q 020692 253 AAKVSAYVTHG 263 (322)
Q Consensus 253 a~~v~~~~tH~ 263 (322)
|++|.+....+
T Consensus 395 a~~v~~ri~sP 405 (510)
T PRK07847 395 AAEVHVRISSP 405 (510)
T ss_pred CCEEEEEECCC
Confidence 99999875433
No 76
>COG2065 PyrR Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=98.17 E-value=7.9e-06 Score=70.18 Aligned_cols=93 Identities=19% Similarity=0.249 Sum_probs=67.4
Q ss_pred HHHHHHHHhc-CCCCCCceEeccCCchHHHHHHHhccCCc---------------eEec--Cce------eeeeccCCCC
Q 020692 169 IPLLKQRLHQ-LPDANNIVIAFPDDGAWKRFHKMLDHFPT---------------VREG--DKR------IVRIKEGNPA 224 (322)
Q Consensus 169 ~~~la~~l~~-~~~~~~~vvV~Pd~Ga~~ra~~~a~~L~~---------------~r~~--~k~------~~~~~~~~v~ 224 (322)
...++.+|.+ ..+.++.+++|.-.+|++.|..++..++. .|.. .+. ..+....++.
T Consensus 16 itRia~eIiErnk~~~~~vlvGIktrGv~lA~rl~~~i~~~Eg~~vp~g~lDIt~yRDDl~~~~~~~p~~~~t~~~~di~ 95 (179)
T COG2065 16 ITRIAHEIIERNKGLDNLVLVGIKTRGVPLAERLAERIEELEGIEVPVGELDITLYRDDLTQKGPLRPQAKTTILPFDIT 95 (179)
T ss_pred HHHHHHHHHHHhCCCCceEEEeEecCCHHHHHHHHHHHHHHhCCCCCeeeEEeEEeechhhhcCccCCcccCccCccccc
Confidence 3445555533 33578899999999999999988864321 1211 011 0123466899
Q ss_pred CCeEEEEeccccChHhHHHHHHHHHHcC-CCeEEEEEE
Q 020692 225 GCHVVIVDDLVQSGGTLIECQKVLAAHG-AAKVSAYVT 261 (322)
Q Consensus 225 g~~vlivDDii~TG~Tl~~~~~~L~~~G-a~~v~~~~t 261 (322)
||+|++|||++-||+|+.+|.++|...| +.+|..+|.
T Consensus 96 ~k~VILVDDVLytGRTIRAAldal~d~GRPa~I~LavL 133 (179)
T COG2065 96 GKRVILVDDVLYTGRTIRAALDALVDYGRPAKIQLAVL 133 (179)
T ss_pred CCEEEEEeeecccCccHHHHHHHHHhcCCcceEEEEEE
Confidence 9999999999999999999999999999 456777774
No 77
>COG0035 Upp Uracil phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=98.05 E-value=1.9e-05 Score=70.75 Aligned_cols=91 Identities=15% Similarity=0.203 Sum_probs=68.7
Q ss_pred ceEeccCCchHHHHHHHhccCCc--------eEecCcee----eeeccCCCCCCeEEEEeccccChHhHHHHHHHHHHc-
Q 020692 185 IVIAFPDDGAWKRFHKMLDHFPT--------VREGDKRI----VRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAH- 251 (322)
Q Consensus 185 ~vvV~Pd~Ga~~ra~~~a~~L~~--------~r~~~k~~----~~~~~~~v~g~~vlivDDii~TG~Tl~~~~~~L~~~- 251 (322)
.++|+....|.....-+.+.++. .|..+... ...++.+++++.|+|+|.|++||+|+..|++.|+++
T Consensus 72 i~~V~ILRAGl~m~~gl~~~~P~a~vG~ig~~Rdeet~~p~~yy~KLP~~~~~~~viv~DPMLATG~s~i~ai~~L~~~G 151 (210)
T COG0035 72 IVIVPILRAGLGMVEGLLKLIPSARVGHIGIYRDEETLEPVLYYEKLPEDIDERTVIVLDPMLATGGSAIAAIDLLKKRG 151 (210)
T ss_pred EEEEEEeeccccHHHHHHHhCCcceEEEEEEEecCccCceehhHHhCCCcccCCeEEEECchhhccHhHHHHHHHHHHhC
Confidence 56777766677666666665554 22222111 112455899999999999999999999999999999
Q ss_pred CCCeEEEEEEeccCCcchHHHHhccc
Q 020692 252 GAAKVSAYVTHGVFPKGSWERFTLKN 277 (322)
Q Consensus 252 Ga~~v~~~~tH~~~~~~a~~~l~~s~ 277 (322)
|+++|.++|. +-++++++++.+++
T Consensus 152 ~~~~I~~v~~--vAapeGi~~v~~~~ 175 (210)
T COG0035 152 GPKNIKVVSL--VAAPEGIKAVEKAH 175 (210)
T ss_pred CCceEEEEEE--EecHHHHHHHHHhC
Confidence 8999999886 55788999999974
No 78
>PF14681 UPRTase: Uracil phosphoribosyltransferase; PDB: 1V9S_B 1UPF_A 1UPU_D 1JLR_B 1BD4_A 1BD3_C 1JLS_D 1XTV_C 1XTU_H 3G6W_C ....
Probab=97.95 E-value=3.4e-05 Score=69.55 Aligned_cols=92 Identities=16% Similarity=0.252 Sum_probs=69.9
Q ss_pred CceEeccCCchHHHHHHHhccCCc--------eEecCce----eeeeccCCCCCCeEEEEeccccChHhHHHHHHHHHHc
Q 020692 184 NIVIAFPDDGAWKRFHKMLDHFPT--------VREGDKR----IVRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAH 251 (322)
Q Consensus 184 ~~vvV~Pd~Ga~~ra~~~a~~L~~--------~r~~~k~----~~~~~~~~v~g~~vlivDDii~TG~Tl~~~~~~L~~~ 251 (322)
+.++|+...+|......+.+.+.. .|...+. ....++.++.+++|+|+|.|++||+|+..+++.|+++
T Consensus 68 ~i~~V~IlRaG~~m~~~~~~~~p~a~~g~i~i~r~~~t~~p~~~y~~LP~~i~~~~VillDpmlaTG~s~~~ai~~L~~~ 147 (207)
T PF14681_consen 68 KICIVPILRAGLPMLEGFREVFPDARVGHIGIQRDEETLEPVLYYNKLPEDIENRKVILLDPMLATGGSAIAAIEILKEH 147 (207)
T ss_dssp CEEEEEETTTHHHHHHHHHHHSTTSEEEEEEEEEETTTSSEEEEEEE--TTGTTSEEEEEESEESSSHHHHHHHHHHHHT
T ss_pred cEEEEEEeCCcHHHHHHHHHhCCCcceEEEEEEEcCCccceeeeHhhCCCCccCCEEEEEeccccchhhHHHHHHHHHHc
Confidence 678888888898888877766554 2333221 1223567789999999999999999999999999999
Q ss_pred CC--CeEEEEEEeccCCcchHHHHhccc
Q 020692 252 GA--AKVSAYVTHGVFPKGSWERFTLKN 277 (322)
Q Consensus 252 Ga--~~v~~~~tH~~~~~~a~~~l~~s~ 277 (322)
|+ ++|.+++. +-++.+++++.+..
T Consensus 148 G~~~~~I~~v~~--ias~~Gl~~l~~~~ 173 (207)
T PF14681_consen 148 GVPEENIIIVSV--IASPEGLERLLKAF 173 (207)
T ss_dssp TG-GGEEEEEEE--EEEHHHHHHHHHHS
T ss_pred CCCcceEEEEEE--EecHHHHHHHHHhC
Confidence 87 57887775 44678999999874
No 79
>PLN02541 uracil phosphoribosyltransferase
Probab=97.91 E-value=4.4e-05 Score=70.46 Aligned_cols=91 Identities=16% Similarity=0.281 Sum_probs=64.0
Q ss_pred ceEeccCCchHHHHHHHhccCCc--------eEecCcee----eeeccCCCC-CCeEEEEeccccChHhHHHHHHHHHHc
Q 020692 185 IVIAFPDDGAWKRFHKMLDHFPT--------VREGDKRI----VRIKEGNPA-GCHVVIVDDLVQSGGTLIECQKVLAAH 251 (322)
Q Consensus 185 ~vvV~Pd~Ga~~ra~~~a~~L~~--------~r~~~k~~----~~~~~~~v~-g~~vlivDDii~TG~Tl~~~~~~L~~~ 251 (322)
.++|+.-..|......+.+.+.. .|...... ...++.++. +++|+|+|||++||+|+..+++.|++.
T Consensus 104 i~~V~ILRAGl~m~~g~~~~~P~a~vg~i~~~rd~~t~e~~~yy~kLP~~i~~~~~VlllDpmLATGgS~~~ai~~L~~~ 183 (244)
T PLN02541 104 VAVVPILRAGLVLLEHASSVLPATKTYHLGFVRDEETLQPSMYLNKLPDKFPEGSRVLVVDPMLATGGTIVAAIDELVSR 183 (244)
T ss_pred EEEEeEeCCcHhHHHHHHhhCCCCeeEEEEEEEcccccceEEeeccCchhcCCCCEEEEECcchhhhHHHHHHHHHHHHc
Confidence 56676666677666655554443 12111111 112345565 679999999999999999999999999
Q ss_pred CCC--eEEEEEEeccCCcchHHHHhccc
Q 020692 252 GAA--KVSAYVTHGVFPKGSWERFTLKN 277 (322)
Q Consensus 252 Ga~--~v~~~~tH~~~~~~a~~~l~~s~ 277 (322)
|+. +|.+++. +-++.+++++.+..
T Consensus 184 Gv~~~~I~~v~~--ias~~Gl~~i~~~f 209 (244)
T PLN02541 184 GASVEQIRVVCA--VAAPPALKKLSEKF 209 (244)
T ss_pred CCCcccEEEEEE--EECHHHHHHHHHHC
Confidence 998 7777764 56788999998873
No 80
>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
Probab=97.27 E-value=0.00051 Score=67.91 Aligned_cols=43 Identities=28% Similarity=0.324 Sum_probs=39.4
Q ss_pred ccCCCCCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEE
Q 020692 219 KEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVT 261 (322)
Q Consensus 219 ~~~~v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~t 261 (322)
+...++||+|++|||=|-.|.|+.+.++.|+++||++|++..-
T Consensus 342 vr~~v~GKrVvlVDDSIVRGTTsr~IV~mlReAGAkEVHvria 384 (470)
T COG0034 342 VREVVKGKRVVLVDDSIVRGTTSRRIVQMLREAGAKEVHVRIA 384 (470)
T ss_pred hHHHhCCCeEEEEccccccCccHHHHHHHHHHhCCCEEEEEec
Confidence 4556899999999999999999999999999999999999654
No 81
>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional
Probab=97.07 E-value=0.025 Score=53.94 Aligned_cols=134 Identities=16% Similarity=0.093 Sum_probs=92.6
Q ss_pred CCcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCchhHHHHHHHHHHhhh
Q 020692 14 KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPR 93 (322)
Q Consensus 14 ~~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~~~l~elll~~~a~~~ 93 (322)
+..+.+-+......+|..+|+.+| .++.-+.-.+..+++.++......++.|++|+|+-.+.+-..-| ...++.|++
T Consensus 160 ~~~vVVsPd~g~~~~a~~la~~l~-~~~~~~~K~R~~~~~~~~~~~~~~~v~Gr~vIIVDDIidTG~Tl--~~aa~~Lk~ 236 (301)
T PRK07199 160 PRPLLIGPDEESEQWVAAVAERAG-APHAVLRKTRHGDRDVEISLPDAAPWAGRTPVLVDDIVSTGRTL--IEAARQLRA 236 (301)
T ss_pred CCcEEEEeCCChHHHHHHHHHHhC-CCEEEEEEEecCCCeEEEEeccCcccCCCEEEEEecccCcHHHH--HHHHHHHHH
Confidence 345666566667889999999997 88887777776666544444334678999999999987764332 246789999
Q ss_pred cCccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchHHHHH
Q 020692 94 LFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLK 173 (322)
Q Consensus 94 ~~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~~~la 173 (322)
.||++|.++.-+-=. +.....++.. +++++|++-|-+... .++ .+.++++|
T Consensus 237 ~GA~~V~~~~tHgvf-------------s~~a~~~l~~------~~i~~iv~Tdti~~~------~~~----~sva~lla 287 (301)
T PRK07199 237 AGAASPDCVVVHALF-------------AGDAYSALAA------AGIARVVSTDTVPHP------SNA----ISLAPLLA 287 (301)
T ss_pred CCCcEEEEEEEeeeC-------------ChHHHHHHHh------CCCCEEEEeCCccCC------CCE----EehHHHHH
Confidence 999999988754322 2223344444 378999999976421 111 15689999
Q ss_pred HHHhcC
Q 020692 174 QRLHQL 179 (322)
Q Consensus 174 ~~l~~~ 179 (322)
+.|.+.
T Consensus 288 ~~i~~~ 293 (301)
T PRK07199 288 EALRRE 293 (301)
T ss_pred HHHHHH
Confidence 999775
No 82
>PRK04923 ribose-phosphate pyrophosphokinase; Provisional
Probab=96.76 E-value=0.069 Score=51.37 Aligned_cols=139 Identities=16% Similarity=0.115 Sum_probs=91.4
Q ss_pred CCcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCch-hHHHHHHHHHHhh
Q 020692 14 KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPG-VIFEQISVIYALP 92 (322)
Q Consensus 14 ~~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~~-~l~elll~~~a~~ 92 (322)
+..+.+-+-.+....|..+|+.||+.++..+.-+|..+++.. ...+..+++|++|+|+..+.+.. .+. ..++.|+
T Consensus 166 ~~~vVVsPD~Ga~~rA~~lA~~L~~~~~~~~~K~R~~~~~~~-~~~~~gdv~Gr~viIVDDIidTG~Tl~---~aa~~Lk 241 (319)
T PRK04923 166 DNLIVVSPDVGGVVRARAVAKRLDDADLAIIDKRRPRANVAT-VMNIIGDVQGKTCVLVDDLVDTAGTLC---AAAAALK 241 (319)
T ss_pred CCCEEEEECCchHHHHHHHHHHcCCCCEEEeccccCCCCceE-EEecccCCCCCEEEEEecccCchHHHH---HHHHHHH
Confidence 455666666668899999999995367766666665544422 23445789999999999987764 443 4688999
Q ss_pred hcCccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCCh--hhhhcccCCCCCccccchHH
Q 020692 93 RLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHA--LQERFYFSDHVLPLFETGIP 170 (322)
Q Consensus 93 ~~~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs--~~~~g~f~~~v~~l~~~~~~ 170 (322)
+.||++|.++.-+-=++. ..+-++.+ +++|+|++-|-.. ...+.. ..+..+ +.++
T Consensus 242 ~~GA~~V~~~~THgvfs~-------------~a~~~l~~------s~i~~iv~Tdtip~~~~~~~~--~k~~~i--sva~ 298 (319)
T PRK04923 242 QRGALKVVAYITHPVLSG-------------PAVDNINN------SQLDELVVTDTIPLSEAARAC--AKIRQL--SVAE 298 (319)
T ss_pred HCCCCEEEEEEECcccCc-------------hHHHHHhh------CCCCEEEEeCCccCchhhccc--CCeEEE--EhHH
Confidence 999999998876633322 22334443 3789999998653 111111 111222 5689
Q ss_pred HHHHHHhcC
Q 020692 171 LLKQRLHQL 179 (322)
Q Consensus 171 ~la~~l~~~ 179 (322)
+||+.|.+.
T Consensus 299 lla~~i~~~ 307 (319)
T PRK04923 299 LLAETIRRI 307 (319)
T ss_pred HHHHHHHHH
Confidence 999999764
No 83
>PRK00934 ribose-phosphate pyrophosphokinase; Provisional
Probab=96.72 E-value=0.058 Score=50.97 Aligned_cols=129 Identities=13% Similarity=0.116 Sum_probs=85.8
Q ss_pred CcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCch-hHHHHHHHHHHhhh
Q 020692 15 KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPG-VIFEQISVIYALPR 93 (322)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~~-~l~elll~~~a~~~ 93 (322)
..+.+-+......+|..+|+.+| .++..+.-.+..+++..+. ....+++|++|+|+-.+.+.. .+. ..+..|++
T Consensus 155 ~~vvv~pd~Ga~~~a~~lA~~l~-~~~~~i~k~r~~~~~~~~~-~~~~~v~Gk~VlIVDDIi~TG~Tl~---~aa~~Lk~ 229 (285)
T PRK00934 155 DPLVLAPDKGALELAKEAAEILG-CEYDYLEKTRISPTEVEIA-PKNLDVKGKDVLIVDDIISTGGTMA---TAIKILKE 229 (285)
T ss_pred CCEEEEeCCchHHHHHHHHHHhC-CCEEEEEEEecCCCeEEEe-ccccccCCCEEEEEcCccccHHHHH---HHHHHHHH
Confidence 34655555667899999999996 8887766666665542222 123478999999999887764 343 45788999
Q ss_pred cCccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchHHHHH
Q 020692 94 LFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLK 173 (322)
Q Consensus 94 ~~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~~~la 173 (322)
.||++|.++.-+-=.+ ...+-++.+ .|+|+|++.|-+.... ..+ +.+++||
T Consensus 230 ~GA~~V~~~~~H~i~~-------------~~a~~~l~~------~~i~~i~~tnti~~~~--------~~~--~va~~la 280 (285)
T PRK00934 230 QGAKKVYVACVHPVLV-------------GDAILKLYN------AGVDEIIVTDTLESEV--------SKI--SVAPLIA 280 (285)
T ss_pred CCCCEEEEEEEeeccC-------------cHHHHHHHh------CCCCEEEEcCCCCCCc--------eEE--EcHHHHH
Confidence 9999998887531111 112223443 3789999999874211 111 5688999
Q ss_pred HHHh
Q 020692 174 QRLH 177 (322)
Q Consensus 174 ~~l~ 177 (322)
+.|+
T Consensus 281 ~~i~ 284 (285)
T PRK00934 281 DLLK 284 (285)
T ss_pred HHHh
Confidence 8874
No 84
>PRK03092 ribose-phosphate pyrophosphokinase; Provisional
Probab=96.60 E-value=0.13 Score=49.24 Aligned_cols=141 Identities=14% Similarity=0.097 Sum_probs=91.0
Q ss_pred CCCcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCC--CceeEEeccCCCCCCCeEEEEEecCCch-hHHHHHHHHH
Q 020692 13 QKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFAD--GWPNLYINSAHDIRGQHVAFLASFSSPG-VIFEQISVIY 89 (322)
Q Consensus 13 ~~~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~Fpd--GE~~v~v~~~~~v~g~dv~iv~s~~~~~-~l~elll~~~ 89 (322)
.+..+.+=+-.....+|..+|+.|+..++.-+...|..+ |+ .....+..+++|++|+|+-.+.+.. .+. ..++
T Consensus 147 ~~~~vvVspd~Ga~~~a~~la~~L~~~~~~~i~k~R~~~~~~~-~~~~~~~~dv~gr~viIVDDIi~TG~Tl~---~aa~ 222 (304)
T PRK03092 147 LDNVTVVSPDAGRVRVAEQWADRLGGAPLAFIHKTRDPTVPNQ-VVANRVVGDVEGRTCVLVDDMIDTGGTIA---GAVR 222 (304)
T ss_pred CCCcEEEEecCchHHHHHHHHHHcCCCCEEEEEEEcccCCCCc-eEEEecCcCCCCCEEEEEccccCcHHHHH---HHHH
Confidence 345566666666778999999999537887777766533 33 2234556789999999999987664 343 4578
Q ss_pred HhhhcCccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchH
Q 020692 90 ALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGI 169 (322)
Q Consensus 90 a~~~~~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~ 169 (322)
.|++.|+++|.++.-+-=.+ ...+-++.+ +|+|.|++.|-+.....-. ...+..+ +.+
T Consensus 223 ~Lk~~Ga~~I~~~~tH~v~~-------------~~a~~~l~~------~~~~~i~~t~tip~~~~~~-~~~~~~~--sva 280 (304)
T PRK03092 223 ALKEAGAKDVIIAATHGVLS-------------GPAAERLKN------CGAREVVVTDTLPIPEEKR-FDKLTVL--SIA 280 (304)
T ss_pred HHHhcCCCeEEEEEEcccCC-------------hHHHHHHHH------CCCCEEEEeeeeccchhhc-CCCeEEE--EhH
Confidence 89999999999887332111 123334544 3789999998653211000 0112222 568
Q ss_pred HHHHHHHhcC
Q 020692 170 PLLKQRLHQL 179 (322)
Q Consensus 170 ~~la~~l~~~ 179 (322)
+++|+.|.+.
T Consensus 281 ~~la~~i~~~ 290 (304)
T PRK03092 281 PLLARAIREV 290 (304)
T ss_pred HHHHHHHHHH
Confidence 8999999765
No 85
>KOG0572 consensus Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
Probab=96.38 E-value=0.0084 Score=58.18 Aligned_cols=43 Identities=33% Similarity=0.332 Sum_probs=39.4
Q ss_pred eccCCCCCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEE
Q 020692 218 IKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYV 260 (322)
Q Consensus 218 ~~~~~v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~ 260 (322)
.+...++||+|+||||=|--|.|+...++.||+.||++|+.-.
T Consensus 349 ~l~~~~~GKrvvlVDDSIVRGtTs~~IVkmlreaGAkeVh~ri 391 (474)
T KOG0572|consen 349 PLRQNFEGKRVVLVDDSIVRGTTSSPIVKMLREAGAKEVHIRI 391 (474)
T ss_pred cchhhcCCceEEEEecceeccCchHHHHHHHHHcCCcEEEEEe
Confidence 3566799999999999999999999999999999999998854
No 86
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional
Probab=96.26 E-value=0.088 Score=46.40 Aligned_cols=95 Identities=13% Similarity=0.097 Sum_probs=66.5
Q ss_pred CCcEEEEecCCCHHHHHHHHHHcCCcc--eeeeeEeeeCC-----CceeEEeccCCCCCCCeEEEEEecCCchhHHHHHH
Q 020692 14 KKQVHLFYCVECEELARKVAAQSDLIT--LQSINWRNFAD-----GWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQIS 86 (322)
Q Consensus 14 ~~~~~i~~g~~~~~la~~ia~~lg~~~--~~~~~~~~Fpd-----GE~~v~v~~~~~v~g~dv~iv~s~~~~~~l~elll 86 (322)
+..+.+=..+.+-.+|..+++.|+ .+ +.-+....|-| |+..+.-.++.+++|++|+||-.+.+...-|. .
T Consensus 34 ~~~vvvgI~~Gg~~fa~~L~~~L~-~~~~v~~l~~ssY~~~~~~~~~v~i~~~~~~~v~gk~VLlVDDIiDTG~TL~--~ 110 (178)
T PRK15423 34 SDMVLVGLLRGSFMFMADLCREVQ-VSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLS--K 110 (178)
T ss_pred CCeEEEEEecCChHHHHHHHHHhC-CCcceeEEEEEEecCCCcccCceEEecCCCCCCCCCEEEEEeeecCchHHHH--H
Confidence 345666666778899999999996 75 55788888864 44344333456899999999999877655444 4
Q ss_pred HHHHhhhcCccceEE-eeccCCCCcc
Q 020692 87 VIYALPRLFVASFTL-VLPFFPTGSF 111 (322)
Q Consensus 87 ~~~a~~~~~a~~i~~-viPY~~YsRq 111 (322)
+.+.++..+++++.. ++-+-+-.|+
T Consensus 111 l~~~l~~~~~~~v~~avL~~K~~~r~ 136 (178)
T PRK15423 111 VREILSLREPKSLAICTLLDKPSRRE 136 (178)
T ss_pred HHHHHHhCCCCEEEEEEEEECCCCCc
Confidence 566678888888844 4444455454
No 87
>PRK02458 ribose-phosphate pyrophosphokinase; Provisional
Probab=96.15 E-value=0.19 Score=48.39 Aligned_cols=138 Identities=14% Similarity=0.059 Sum_probs=87.1
Q ss_pred CCcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCchhHHHHHHHHHHhhh
Q 020692 14 KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPR 93 (322)
Q Consensus 14 ~~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~~~l~elll~~~a~~~ 93 (322)
+..+.+=+-.....+|+.+|+.|| .++.-+...+ .+.+.. ...+..++.|++|+||..+.+...- +...+..|++
T Consensus 169 ~~~vvV~pd~Ga~~~A~~la~~L~-~~~~~~~~~r-~~~~~~-~~~i~gdV~gk~viIVDDIidTG~T--l~~aa~~Lk~ 243 (323)
T PRK02458 169 SDVVVVSPKNSGIKRARSLAEYLD-APIAIIDYAQ-DDSERE-EGYIIGDVAGKKAILIDDILNTGKT--FAEAAKIVER 243 (323)
T ss_pred CceEEEEECCChHHHHHHHHHHhC-CCEEEEEEec-CCCcce-eeccccccCCCEEEEEcceeCcHHH--HHHHHHHHHh
Confidence 344555455557899999999996 8877555433 222211 1234468999999999998776432 2346889999
Q ss_pred cCccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchHHHHH
Q 020692 94 LFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLK 173 (322)
Q Consensus 94 ~~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~~~la 173 (322)
.||++|.++.-+.=++. ...-++.+ +++|+|++-|-+..... .. ..+..+ +.++++|
T Consensus 244 ~GA~~V~~~~tHgif~~-------------~a~~~l~~------s~i~~iv~TdTi~~~~~-~~-~k~~~i--sva~lla 300 (323)
T PRK02458 244 EGATEIYAVASHGLFAG-------------GAAEVLEN------APIKEILVTDSVATKER-VP-KNVTYL--SASELIA 300 (323)
T ss_pred CCCCcEEEEEEChhcCc-------------hHHHHHhh------CCCCEEEEECCcCCchh-cC-CCcEEE--EhHHHHH
Confidence 99999998876643322 12233443 37899999986632111 10 112222 5688999
Q ss_pred HHHhcC
Q 020692 174 QRLHQL 179 (322)
Q Consensus 174 ~~l~~~ 179 (322)
+.|.+.
T Consensus 301 ~~i~~~ 306 (323)
T PRK02458 301 DAIIRI 306 (323)
T ss_pred HHHHHH
Confidence 998764
No 88
>PRK02269 ribose-phosphate pyrophosphokinase; Provisional
Probab=95.79 E-value=0.41 Score=46.08 Aligned_cols=141 Identities=15% Similarity=0.081 Sum_probs=88.5
Q ss_pred CCcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCC-ceeEEeccCCCCCCCeEEEEEecCCchhHHHHHHHHHHhh
Q 020692 14 KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADG-WPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALP 92 (322)
Q Consensus 14 ~~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdG-E~~v~v~~~~~v~g~dv~iv~s~~~~~~l~elll~~~a~~ 92 (322)
+..+.+=+-......|..+|+.|| .++.-++-++-.+. .......+..+++|++|+||..+.+...- +...++.|+
T Consensus 165 ~~~vvVsPd~G~~~~A~~lA~~lg-~~~~~~~k~r~~~~~~~~~~~~~~gdv~Gr~viIVDDIidTG~T--l~~aa~~Lk 241 (320)
T PRK02269 165 DDVVVVSPDHGGVTRARKLAQFLK-TPIAIIDKRRSVDKMNTSEVMNIIGNVKGKKCILIDDMIDTAGT--ICHAADALA 241 (320)
T ss_pred CCcEEEEECccHHHHHHHHHHHhC-CCEEEEEecccCCCCceeEEEEeccccCCCEEEEEeeecCcHHH--HHHHHHHHH
Confidence 445555555557789999999997 88765554443221 11222234568999999999998765432 234688999
Q ss_pred hcCccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchHHHH
Q 020692 93 RLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLL 172 (322)
Q Consensus 93 ~~~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~~~l 172 (322)
+.||++|.++.-+.=++. ..+-++.+ +++++|++-|-+........ ..+..+ +.++++
T Consensus 242 ~~GA~~V~~~~tHglf~~-------------~a~~~l~~------~~i~~iv~Tdti~~~~~~~~-~k~~~i--sva~~l 299 (320)
T PRK02269 242 EAGATEVYASCTHPVLSG-------------PALDNIQK------SAIEKLVVLDTIYLPEERLI-DKIEQI--SIADLL 299 (320)
T ss_pred HCCCCEEEEEEECcccCc-------------hHHHHHHh------CCCCEEEEeCCCCCcccccc-CCeEEE--EhHHHH
Confidence 999999988876633322 22334433 37899999996532111111 122222 568999
Q ss_pred HHHHhcC
Q 020692 173 KQRLHQL 179 (322)
Q Consensus 173 a~~l~~~ 179 (322)
|+.|.+.
T Consensus 300 a~~i~~~ 306 (320)
T PRK02269 300 GEAIIRI 306 (320)
T ss_pred HHHHHHH
Confidence 9999775
No 89
>PRK01259 ribose-phosphate pyrophosphokinase; Provisional
Probab=95.55 E-value=0.56 Score=44.91 Aligned_cols=141 Identities=19% Similarity=0.124 Sum_probs=89.5
Q ss_pred CCcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCchhHHHHHHHHHHhhh
Q 020692 14 KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPR 93 (322)
Q Consensus 14 ~~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~~~l~elll~~~a~~~ 93 (322)
+..+.+=+......+|..+|+.|| .++.-++-.+..+++.. ...+..+++|++|+|+..+.+...-| ...++.+++
T Consensus 158 ~~~vvv~pd~Gg~~~A~~la~~Lg-~~~~~~~k~r~~~~~~~-~~~~~~~~~g~~vliVDDii~TG~T~--~~a~~~l~~ 233 (309)
T PRK01259 158 ENLVVVSPDVGGVVRARALAKRLD-ADLAIIDKRRPRANVSE-VMNIIGDVEGRDCILVDDMIDTAGTL--CKAAEALKE 233 (309)
T ss_pred CCcEEEEECCCcHHHHHHHHHHhC-CCEEEEEeecccceeEE-EEeecccCCCCEEEEEecccCcHHHH--HHHHHHHHc
Confidence 344555555567899999999997 88887776666666432 23445689999999999987764432 245788999
Q ss_pred cCccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchHHHHH
Q 020692 94 LFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLK 173 (322)
Q Consensus 94 ~~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~~~la 173 (322)
.|++++.++.-+.=.+ ...+-++.+ +++|.+++.|-+...........+..+ +.++++|
T Consensus 234 ~Ga~~v~~~~tH~i~~-------------~~a~~~l~~------~~~~~iv~t~ti~~~~~~~~~~k~~~i--sva~~ia 292 (309)
T PRK01259 234 RGAKSVYAYATHPVLS-------------GGAIERIEN------SVIDELVVTDSIPLSEEAKKCDKIRVL--SVAPLLA 292 (309)
T ss_pred cCCCEEEEEEEeeeCC-------------hHHHHHHhc------CCCCEEEEecCcccchhhccCCCeEEE--EcHHHHH
Confidence 9999998877532111 112223333 368999999865321110000111122 5688999
Q ss_pred HHHhcC
Q 020692 174 QRLHQL 179 (322)
Q Consensus 174 ~~l~~~ 179 (322)
+.|.+.
T Consensus 293 ~~i~~~ 298 (309)
T PRK01259 293 EAIRRI 298 (309)
T ss_pred HHHHHH
Confidence 999764
No 90
>PLN02369 ribose-phosphate pyrophosphokinase
Probab=95.33 E-value=0.84 Score=43.57 Aligned_cols=139 Identities=14% Similarity=0.104 Sum_probs=87.5
Q ss_pred cEEEE-ecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCchhHHHHHHHHHHhhhc
Q 020692 16 QVHLF-YCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRL 94 (322)
Q Consensus 16 ~~~i~-~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~~~l~elll~~~a~~~~ 94 (322)
++.++ +-.+...+|+.+++.+.+.+++-+..+|..++... ...+..++.|++|+|+..+.+...- +...++.+++.
T Consensus 152 ~~vvVspd~gg~~~a~~~a~~l~~~~~~~l~k~R~~~~~~~-~~~~~~~v~g~~viivDDii~TG~T--l~~a~~~l~~~ 228 (302)
T PLN02369 152 DLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRQGHNVAE-VMNLIGDVKGKVAIMVDDMIDTAGT--ITKGAALLHQE 228 (302)
T ss_pred ceEEEEECcChHHHHHHHHHHcCCCCEEEEEEecCCcceee-eEecCCCCCCCEEEEEcCcccchHH--HHHHHHHHHhC
Confidence 34444 44457789999999994378887777775555422 2345678999999999888665332 23456889999
Q ss_pred CccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChhhhhcccCCCCCccccchHHHHHH
Q 020692 95 FVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHALQERFYFSDHVLPLFETGIPLLKQ 174 (322)
Q Consensus 95 ~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~~~~g~f~~~v~~l~~~~~~~la~ 174 (322)
|++++.++..+.=.+. ..+-++.+ +++|.|++.|-+.......|+ .+..+ +.+++||+
T Consensus 229 Ga~~v~~~~tH~v~~~-------------~a~~~l~~------~~~~~iv~t~ti~~~~~~~~~-~~~~~--~v~~~la~ 286 (302)
T PLN02369 229 GAREVYACATHAVFSP-------------PAIERLSS------GLFQEVIVTNTIPVSEKNYFP-QLTVL--SVANLLGE 286 (302)
T ss_pred CCCEEEEEEEeeeeCH-------------HHHHHHHh------CCCCEEEEeCCCCChhhcccC-CceEE--EHHHHHHH
Confidence 9999998873221111 11223333 268999999866421111122 22222 56889999
Q ss_pred HHhcC
Q 020692 175 RLHQL 179 (322)
Q Consensus 175 ~l~~~ 179 (322)
.|.+.
T Consensus 287 ~i~~~ 291 (302)
T PLN02369 287 TIWRV 291 (302)
T ss_pred HHHHH
Confidence 99765
No 91
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=95.19 E-value=0.32 Score=42.80 Aligned_cols=90 Identities=8% Similarity=0.081 Sum_probs=61.8
Q ss_pred CCCcEEEEecCCCHHHHHHHHHHcCCcce--eeeeEeeeCCCce----eEEeccCCCCCCCeEEEEEecCCchhHHHHHH
Q 020692 13 QKKQVHLFYCVECEELARKVAAQSDLITL--QSINWRNFADGWP----NLYINSAHDIRGQHVAFLASFSSPGVIFEQIS 86 (322)
Q Consensus 13 ~~~~~~i~~g~~~~~la~~ia~~lg~~~~--~~~~~~~FpdGE~----~v~v~~~~~v~g~dv~iv~s~~~~~~l~elll 86 (322)
.+..+.|=..++...+|..+|+.|| +++ .-+...++.+++. ........+++|++|+||-...+....++ .
T Consensus 39 ~~~~viV~i~~gg~~~A~~La~~l~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~gk~VLIVDDIidTG~Tl~--~ 115 (181)
T PRK09162 39 DENPLVLCVMGGGLVFTGQLLPRLD-FPLEFDYLHATRYRNETTGGELVWKVKPRESLKGRTVLVVDDILDEGHTLA--A 115 (181)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHcC-CCcccCEEEEEecCCCccCCceeEecCCCCCCCCCEEEEEccccCcHHHHH--H
Confidence 3445666566678899999999996 764 3455566655432 22223345799999999988877654433 3
Q ss_pred HHHHhhhcCccceEEeecc
Q 020692 87 VIYALPRLFVASFTLVLPF 105 (322)
Q Consensus 87 ~~~a~~~~~a~~i~~viPY 105 (322)
.++.|++.|+++|.+...+
T Consensus 116 ~~~~Lk~~Ga~~V~~avL~ 134 (181)
T PRK09162 116 IRDRCLEMGAAEVYSAVLV 134 (181)
T ss_pred HHHHHHhCCCCEEEEEEEE
Confidence 5677888999999877644
No 92
>PRK02812 ribose-phosphate pyrophosphokinase; Provisional
Probab=95.05 E-value=1.2 Score=43.16 Aligned_cols=138 Identities=14% Similarity=0.124 Sum_probs=87.7
Q ss_pred cEEEEe-cCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCchhHHHHHHHHHHhhhc
Q 020692 16 QVHLFY-CVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRL 94 (322)
Q Consensus 16 ~~~i~~-g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~~~l~elll~~~a~~~~ 94 (322)
++.+++ -.+...+|+.+|+.|++.++..+.-++-.+++. ....+..++.|++|+|+..+.+...- +...++.+++.
T Consensus 180 ~~vvVsPD~gg~~ra~~~A~~L~~~~~~~~~k~R~~~~~~-~~~~~~~~v~g~~viiVDDii~TG~T--~~~a~~~L~~~ 256 (330)
T PRK02812 180 DIVVVSPDVGGVARARAFAKKLNDAPLAIIDKRRQAHNVA-EVLNVIGDVKGKTAILVDDMIDTGGT--ICEGARLLRKE 256 (330)
T ss_pred CeEEEEECCccHHHHHHHHHHhCCCCEEEEEeeccCCcee-eeEeccccCCCCEEEEEccccCcHHH--HHHHHHHHhcc
Confidence 444444 344678899999999547777777666555432 22344568999999999988765432 22457899999
Q ss_pred CccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChh-hhhcccCCCCCccccchHHHHH
Q 020692 95 FVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHAL-QERFYFSDHVLPLFETGIPLLK 173 (322)
Q Consensus 95 ~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~-~~~g~f~~~v~~l~~~~~~~la 173 (322)
|+++|.++..+-=. +...+-++.+ +++|.|++.|-+.. ....| + .+..+ +.+++|+
T Consensus 257 Ga~~v~~~~tH~v~-------------s~~a~~~l~~------~~id~iv~tnti~~~~~~~~-~-~~~~~--~va~lla 313 (330)
T PRK02812 257 GAKQVYACATHAVF-------------SPPAIERLSS------GLFEEVIVTNTIPVPEERRF-P-QLKVL--SVANMLG 313 (330)
T ss_pred CCCeEEEEEEcccC-------------ChHHHHHHhh------CCCCEEEEeCCCCChhhccc-C-CceEE--EHHHHHH
Confidence 99999988833211 1122334433 36899999997643 11111 1 22222 5688999
Q ss_pred HHHhcC
Q 020692 174 QRLHQL 179 (322)
Q Consensus 174 ~~l~~~ 179 (322)
+.|.+.
T Consensus 314 ~~i~~~ 319 (330)
T PRK02812 314 EAIWRI 319 (330)
T ss_pred HHHHHH
Confidence 998764
No 93
>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional
Probab=94.95 E-value=0.31 Score=48.80 Aligned_cols=130 Identities=14% Similarity=0.082 Sum_probs=82.4
Q ss_pred CCceEeccCCchHHHHHHHhccCCc-------eEecCceeeeeccCCCCCCeEEEEeccccC-hHh---HHHHHHHHHHc
Q 020692 183 NNIVIAFPDDGAWKRFHKMLDHFPT-------VREGDKRIVRIKEGNPAGCHVVIVDDLVQS-GGT---LIECQKVLAAH 251 (322)
Q Consensus 183 ~~~vvV~Pd~Ga~~ra~~~a~~L~~-------~r~~~k~~~~~~~~~v~g~~vlivDDii~T-G~T---l~~~~~~L~~~ 251 (322)
++.+++ .-.+....|..++..|+. .|..+.+..-.+.+++.|++|+||-.+... -.. +.-+++.|+++
T Consensus 118 ~~m~I~-sgs~~~~LA~~IA~~Lg~~l~~~~~~rFpDGE~~Vri~e~VrG~dV~IVqS~~~pvNd~LmELLllidAlr~a 196 (439)
T PTZ00145 118 ENAILF-SGSSNPLLSKNIADHLGTILGRVHLKRFADGEVSMQFLESIRGKDVYIIQPTCPPVNENLIELLLMISTCRRA 196 (439)
T ss_pred CCeEEE-ECCCCHHHHHHHHHHhCCCceeeEEEECCCCCEEEEECCCcCCCeEEEEecCCCCCcHHHHHHHHHHHHHHHh
Confidence 344555 445678888889988875 133344432235678999999999987654 333 44577899999
Q ss_pred CCCeEEEEEEec-------cC------CcchHHHHh-cccCCCccCCcCEEEEecCCcCchhhhcc-CCCeEEEechHHH
Q 020692 252 GAAKVSAYVTHG-------VF------PKGSWERFT-LKNGENMENAFANFWITDSCPLTVKAIAN-KAPFEVLSLAGSI 316 (322)
Q Consensus 252 Ga~~v~~~~tH~-------~~------~~~a~~~l~-~s~~~g~~~~~~~iv~Tdti~~~~~~~~~-~~k~~~~~va~~l 316 (322)
||++|.++.-+- .| +.....+|. .+| +|+|++-|-.-........ .-++.-++..+.+
T Consensus 197 gAkrItlViPYl~YaRQDR~~~~gepIsak~vA~lL~~~G-------~d~VitvDlHs~~i~~fF~~~iPvdnl~a~~~~ 269 (439)
T PTZ00145 197 SAKKITAVIPYYGYARQDRKLSSRVPISAADVARMIEAMG-------VDRVVAIDLHSGQIQGFFGPRVPVDNLEAQLIG 269 (439)
T ss_pred ccCeEEEEeecccchheecccCCCCChhHHHHHHHHHHcC-------CCeEEEEecChHHHHhhcCCCcccccccccHHH
Confidence 999999877421 11 222233344 446 7999999977543322211 1245667778888
Q ss_pred HHhh
Q 020692 317 ADAL 320 (322)
Q Consensus 317 a~~i 320 (322)
++.+
T Consensus 270 a~~i 273 (439)
T PTZ00145 270 LDYF 273 (439)
T ss_pred HHHH
Confidence 8766
No 94
>PF15609 PRTase_2: Phosphoribosyl transferase
Probab=94.81 E-value=0.05 Score=48.32 Aligned_cols=38 Identities=24% Similarity=0.325 Sum_probs=31.5
Q ss_pred CCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEE
Q 020692 224 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVT 261 (322)
Q Consensus 224 ~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~t 261 (322)
..+.+++|||=+|||.|+..+++.|++.-..+=+++++
T Consensus 120 ~~~~lVLVDDEiSTG~T~lnli~al~~~~p~~~yvvas 157 (191)
T PF15609_consen 120 NARTLVLVDDEISTGNTFLNLIRALHAKYPRKRYVVAS 157 (191)
T ss_pred CCCCEEEEecCccchHHHHHHHHHHHHhCCCceEEEEE
Confidence 36799999999999999999999999886665555443
No 95
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=94.44 E-value=0.79 Score=39.73 Aligned_cols=92 Identities=12% Similarity=0.117 Sum_probs=61.6
Q ss_pred hccCCCcEEEEecCCCHHHHHHHHHHcCCcc--eeeeeEeeeCCC-----ceeEEeccCCCCCCCeEEEEEecCCch-hH
Q 020692 10 KKSQKKQVHLFYCVECEELARKVAAQSDLIT--LQSINWRNFADG-----WPNLYINSAHDIRGQHVAFLASFSSPG-VI 81 (322)
Q Consensus 10 ~~~~~~~~~i~~g~~~~~la~~ia~~lg~~~--~~~~~~~~FpdG-----E~~v~v~~~~~v~g~dv~iv~s~~~~~-~l 81 (322)
+++.+..+.+=...+.-.+|..+++.|| .+ +..+....|-|+ +..+...++.++.|++|+|+-.+.+.. .+
T Consensus 22 ~~~~~~~vvv~i~~GG~~~a~~l~~~L~-~~~~v~~i~~~~Y~~~~~~~~~~~~~~~~~~~~~gk~vlivDDii~TG~Tl 100 (166)
T TIGR01203 22 DYAGKPLVLLCVLKGSFPFFADLIRYIA-VPVQVDFMAVSSYGNGMQSSGDVKILKDLDLSIKGKDVLIVEDIVDTGLTL 100 (166)
T ss_pred HcCCCCeEEEEEccCCHHHHHHHHHhcC-CCceeeEEEEeeccCCCcccCceEEecCCCCCCCCCEEEEEeeeeCcHHHH
Confidence 3333445555556678899999999996 54 556676766543 223333356689999999999887664 44
Q ss_pred HHHHHHHHHhhhcCccceEEeecc
Q 020692 82 FEQISVIYALPRLFVASFTLVLPF 105 (322)
Q Consensus 82 ~elll~~~a~~~~~a~~i~~viPY 105 (322)
.+ .+++|+..|+++|..+.-+
T Consensus 101 ~~---~~~~l~~~g~~~i~~~~l~ 121 (166)
T TIGR01203 101 QY---LLDLLKARKPKSLKIVTLL 121 (166)
T ss_pred HH---HHHHHHHCCCCEEEEEEEE
Confidence 44 4567777888888766543
No 96
>PRK00553 ribose-phosphate pyrophosphokinase; Provisional
Probab=94.40 E-value=0.77 Score=44.45 Aligned_cols=128 Identities=13% Similarity=0.069 Sum_probs=79.1
Q ss_pred CceEeccCCchHHHHHHHhccCCc-------eEecCceeeeeccCCCCCCeEEEEeccccC-hHh---HHHHHHHHHHcC
Q 020692 184 NIVIAFPDDGAWKRFHKMLDHFPT-------VREGDKRIVRIKEGNPAGCHVVIVDDLVQS-GGT---LIECQKVLAAHG 252 (322)
Q Consensus 184 ~~vvV~Pd~Ga~~ra~~~a~~L~~-------~r~~~k~~~~~~~~~v~g~~vlivDDii~T-G~T---l~~~~~~L~~~G 252 (322)
+..++ ...+....|..+++.|+. .+..+.+..-.+..+++|++|+||-++... ... +.-.++.|++.|
T Consensus 9 ~~~i~-~~~~~~~La~~ia~~lg~~l~~~~~~~FpdGE~~v~i~~~vrg~dV~ivqs~~~p~nd~l~eLll~~~alr~~~ 87 (332)
T PRK00553 9 NHVIF-SLSKAKKLVDSICRKLSMKPGEIVIQKFADGETYIRFDESVRNKDVVIFQSTCSPVNDSLMELLIAIDALKRGS 87 (332)
T ss_pred CeEEE-ECCCCHHHHHHHHHHhCCceeeeEEEECCCCCEEEEECCCCCCCEEEEEcCCCCCCchHHHHHHHHHHHHHHcC
Confidence 33333 334567778888877764 133344332235677999999999997654 333 445778999999
Q ss_pred CCeEEEEEEec-------c------CCcchHHHHh-cccCCCccCCcCEEEEecCCcCchhhhccCCCeEEEechHHHHH
Q 020692 253 AAKVSAYVTHG-------V------FPKGSWERFT-LKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGSIAD 318 (322)
Q Consensus 253 a~~v~~~~tH~-------~------~~~~a~~~l~-~s~~~g~~~~~~~iv~Tdti~~~~~~~~~~~k~~~~~va~~la~ 318 (322)
|++|.++.-+- . ++.....+|. ..| +|+|++-|-.-....... .-++.-++..+++++
T Consensus 88 a~~i~~ViPYl~YaRQDr~~~~~e~isak~vA~ll~~~g-------~d~vit~DlH~~~i~~~F-~ipv~~l~a~~~~~~ 159 (332)
T PRK00553 88 AKSITAILPYYGYARQDRKTAGREPITSKLVADLLTKAG-------VTRVTLTDIHSDQTQGFF-DIPVDILRTYHVFLS 159 (332)
T ss_pred CCeEEEEeeccccchhhcccCCCCCccHHHHHHHHHhcC-------CCEEEEEeCChHHHHhhc-CCCcceeechHHHHH
Confidence 99998876321 1 1222333344 446 799999997754322221 224566777888887
Q ss_pred hh
Q 020692 319 AL 320 (322)
Q Consensus 319 ~i 320 (322)
.+
T Consensus 160 ~~ 161 (332)
T PRK00553 160 RV 161 (332)
T ss_pred HH
Confidence 66
No 97
>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism]
Probab=94.33 E-value=0.47 Score=45.43 Aligned_cols=136 Identities=14% Similarity=0.097 Sum_probs=90.7
Q ss_pred cEEEEecC-CCHHHHHHHHHHcCCcceeeeeEeee-CCCceeEEeccCCCCCCCeEEEEEecCCc-hhHHHHHHHHHHhh
Q 020692 16 QVHLFYCV-ECEELARKVAAQSDLITLQSINWRNF-ADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALP 92 (322)
Q Consensus 16 ~~~i~~g~-~~~~la~~ia~~lg~~~~~~~~~~~F-pdGE~~v~v~~~~~v~g~dv~iv~s~~~~-~~l~elll~~~a~~ 92 (322)
+..++|-. +.-..|+.+|+.|| .++.-++-+|- .+.|.++. .+..+|+|++|+|+..+-+- ..+ ...+++|+
T Consensus 164 d~vVVSPD~Ggv~RAr~~A~~L~-~~~a~i~K~R~~~~~~v~~~-~~~gdV~gk~~iiVDDiIdTgGTi---~~Aa~~Lk 238 (314)
T COG0462 164 DPVVVSPDKGGVKRARALADRLG-APLAIIDKRRDSSPNVVEVM-NLIGDVEGKDVVIVDDIIDTGGTI---AKAAKALK 238 (314)
T ss_pred CcEEECCCccHHHHHHHHHHHhC-CCEEEEEEeecCCCCeEEEe-ecccccCCCEEEEEeccccccHHH---HHHHHHHH
Confidence 44555432 35688999999997 89988888886 55654443 34679999999999887543 444 34688999
Q ss_pred hcCccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEec--CChhhhhcccCCCCCccccchHH
Q 020692 93 RLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYD--IHALQERFYFSDHVLPLFETGIP 170 (322)
Q Consensus 93 ~~~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~Vd--lHs~~~~g~f~~~v~~l~~~~~~ 170 (322)
+.||++|.+..-+-=++ ....+.+++ ..++.|+.-| +|. ..+-+ . .+..+ +.++
T Consensus 239 ~~GAk~V~a~~tH~vfs--------------~~a~~~l~~-----~~i~~vivTnTi~~~-~~~~~-~-~~~~i--sva~ 294 (314)
T COG0462 239 ERGAKKVYAAATHGVFS--------------GAALERLEA-----SAIDEVIVTDTIPLP-EKKKI-P-KVSVI--SVAP 294 (314)
T ss_pred HCCCCeEEEEEEchhhC--------------hHHHHHHhc-----CCCCEEEEeCCcccc-ccccc-C-ceEEE--EhHH
Confidence 99999999876543333 223455653 2488999877 332 11111 1 22222 5799
Q ss_pred HHHHHHhcCC
Q 020692 171 LLKQRLHQLP 180 (322)
Q Consensus 171 ~la~~l~~~~ 180 (322)
++|+.|.+.+
T Consensus 295 liaeaI~ri~ 304 (314)
T COG0462 295 LIAEAIRRIH 304 (314)
T ss_pred HHHHHHHHHH
Confidence 9999998853
No 98
>PF13793 Pribosyltran_N: N-terminal domain of ribose phosphate pyrophosphokinase; PDB: 2JI4_A 1DKU_B 1IBS_B 1DKR_B 3MBI_C 3LRT_B 3LPN_B 3NAG_B 2H07_B 2H06_B ....
Probab=93.49 E-value=0.73 Score=37.70 Aligned_cols=75 Identities=13% Similarity=0.152 Sum_probs=46.5
Q ss_pred cCCchHHHHHHHhccCCc-------eEecCceeeeeccCCCCCCeEEEEeccccC-hH---hHHHHHHHHHHcCCCeEEE
Q 020692 190 PDDGAWKRFHKMLDHFPT-------VREGDKRIVRIKEGNPAGCHVVIVDDLVQS-GG---TLIECQKVLAAHGAAKVSA 258 (322)
Q Consensus 190 Pd~Ga~~ra~~~a~~L~~-------~r~~~k~~~~~~~~~v~g~~vlivDDii~T-G~---Tl~~~~~~L~~~Ga~~v~~ 258 (322)
...+.-..|+.+++.|+. .+..+.+..-.+.++++|++|+||-++... -. .+.-+++++++.||++|.+
T Consensus 5 ~g~~~~~La~~ia~~L~~~~~~~~~~~F~dGE~~v~i~~~v~g~dv~iiqs~~~~~nd~lmeLll~i~a~r~~~a~~i~~ 84 (116)
T PF13793_consen 5 SGSSSQDLAERIAEALGIPLGKVETKRFPDGETYVRIPESVRGKDVFIIQSTSPPVNDNLMELLLLIDALRRAGAKRITL 84 (116)
T ss_dssp ESSSGHHHHHHHHHHTTS-EE-EEEEE-TTS-EEEEESS--TTSEEEEE---SSSHHHHHHHHHHHHHHHHHTTBSEEEE
T ss_pred ECCCCHHHHHHHHHHhCCceeeeEEEEcCCCCEEEEecccccCCceEEEEecCCchhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 344567777788877775 123333332235678999999999999976 23 3455789999999999999
Q ss_pred EEEeccCC
Q 020692 259 YVTHGVFP 266 (322)
Q Consensus 259 ~~tH~~~~ 266 (322)
+. +-|.
T Consensus 85 Vi--PYl~ 90 (116)
T PF13793_consen 85 VI--PYLP 90 (116)
T ss_dssp EE--SS-T
T ss_pred ec--cchh
Confidence 87 4443
No 99
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=93.22 E-value=1.4 Score=38.79 Aligned_cols=97 Identities=12% Similarity=0.134 Sum_probs=66.8
Q ss_pred hhhhhhccCCCcEEEEecCCCHHHHHHHHHHcCCc--ceeeeeEeeeCCC-----ceeEEeccCCCCCCCeEEEEEecCC
Q 020692 5 REIKAKKSQKKQVHLFYCVECEELARKVAAQSDLI--TLQSINWRNFADG-----WPNLYINSAHDIRGQHVAFLASFSS 77 (322)
Q Consensus 5 ~~~~~~~~~~~~~~i~~g~~~~~la~~ia~~lg~~--~~~~~~~~~FpdG-----E~~v~v~~~~~v~g~dv~iv~s~~~ 77 (322)
.++..++.++.++.+=-...+-.++..+++++. + ++..+.+..|-+| +..+.-.+.++++|+||++|..+-+
T Consensus 26 ~~I~~~y~g~~~~vv~iLkGs~~F~~dL~r~i~-~~~e~dFm~vSSYg~~t~ssg~v~i~kDld~di~grdVLiVeDIiD 104 (178)
T COG0634 26 AQITEDYGGKDPLVVGVLKGSFPFMADLIRAID-FPLEVDFMHVSSYGGGTSSSGEVKILKDLDEDIKGRDVLIVEDIID 104 (178)
T ss_pred HHHHHhhCCCceEEEEEcccchhhHHHHHHhcC-CCceeEEEEEeccCCCcccCCceEEecccccCCCCCeEEEEecccc
Confidence 355566667666666667778888888988884 5 4467888888654 4334334678999999999988765
Q ss_pred chhHHHHHHHHHHhhhcCccceEEeec
Q 020692 78 PGVIFEQISVIYALPRLFVASFTLVLP 104 (322)
Q Consensus 78 ~~~l~elll~~~a~~~~~a~~i~~viP 104 (322)
....|. .+.+-|+..||+++..+.-
T Consensus 105 sG~TLs--~i~~~l~~r~a~sv~i~tL 129 (178)
T COG0634 105 SGLTLS--KVRDLLKERGAKSVRIATL 129 (178)
T ss_pred cChhHH--HHHHHHHhCCCCeEEEEEE
Confidence 543322 2445566778888876643
No 100
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=92.69 E-value=2.4 Score=37.59 Aligned_cols=94 Identities=14% Similarity=0.141 Sum_probs=61.5
Q ss_pred hhccCCCcEEEEecCCCHHHHHHHHHHcCCc---c--eeeeeEeeeCCC-----ceeEEe-ccCCCCCCCeEEEEEecCC
Q 020692 9 AKKSQKKQVHLFYCVECEELARKVAAQSDLI---T--LQSINWRNFADG-----WPNLYI-NSAHDIRGQHVAFLASFSS 77 (322)
Q Consensus 9 ~~~~~~~~~~i~~g~~~~~la~~ia~~lg~~---~--~~~~~~~~FpdG-----E~~v~v-~~~~~v~g~dv~iv~s~~~ 77 (322)
.++..+..+.+=.....-.+|..+++.|+ . + +..+...++.+| +..+.. .+..+++|++|+||-.+.+
T Consensus 30 ~~~~~~~~vivgi~~Gg~~fa~~L~~~L~-~~~~~~~i~fi~~~sy~~~~~~~g~~~i~~~~~~~~v~gk~VliVDDIid 108 (189)
T PLN02238 30 SDYAGKSPVVLGVATGAFMFLADLVRAIQ-PLPRGLTVDFIRASSYGGGTESSGVAKVSGADLKIDVKGKHVLLVEDIVD 108 (189)
T ss_pred HHcCCCCcEEEEEccCCHHHHHHHHHHhC-ccCCCeEEEEEEeeecCCCccccCceeEecCCCCCCCCCCEEEEEecccc
Confidence 33333445555555667789999999996 6 3 345667777653 333332 3346799999999998876
Q ss_pred chhHHHHHHHHHHhhhcCccceEEeecc
Q 020692 78 PGVIFEQISVIYALPRLFVASFTLVLPF 105 (322)
Q Consensus 78 ~~~l~elll~~~a~~~~~a~~i~~viPY 105 (322)
...-| ..+++.+++.|++++.++.-+
T Consensus 109 TG~Tl--~~~~~~l~~~g~~~v~~avL~ 134 (189)
T PLN02238 109 TGNTL--SALVAHLEAKGAASVSVCALL 134 (189)
T ss_pred hHHHH--HHHHHHHHhCCCCEEEEEEEE
Confidence 54322 234577888899998766533
No 101
>KOG1017 consensus Predicted uracil phosphoribosyltransferase [General function prediction only]
Probab=92.43 E-value=0.42 Score=42.80 Aligned_cols=72 Identities=15% Similarity=0.260 Sum_probs=51.2
Q ss_pred ccCCCCCCeEEEEeccccChHhHHHHHHHHHHcCCCe--EEEEEEeccCC-cchHHHHhcccCCCccCCcCEEEEecCCc
Q 020692 219 KEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAK--VSAYVTHGVFP-KGSWERFTLKNGENMENAFANFWITDSCP 295 (322)
Q Consensus 219 ~~~~v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~--v~~~~tH~~~~-~~a~~~l~~s~~~g~~~~~~~iv~Tdti~ 295 (322)
...|+--|+|++.=.+++||.|+.+|++.|++.|... |+.+. +|. +.+.+.+.+.. | .=.|++|+-.|
T Consensus 183 fppDI~sR~VLLmYPi~stGnTV~~Av~VL~EhgVp~s~IiL~s---LF~tP~gak~i~~~f----P--~itiltseihp 253 (267)
T KOG1017|consen 183 FPPDITSRRVLLMYPIISTGNTVCKAVEVLKEHGVPDSNIILVS---LFITPTGAKNITRKF----P--YITILTSEIHP 253 (267)
T ss_pred cCCcccceeEEEEeeeecCCccHHHHHHHHHHcCCCcccEEEEE---eeecchhhHHHHHhC----C--eEEEEeeccee
Confidence 4668899999999999999999999999999999774 44444 443 44555555542 0 23566666666
Q ss_pred Cchh
Q 020692 296 LTVK 299 (322)
Q Consensus 296 ~~~~ 299 (322)
...+
T Consensus 254 vaPn 257 (267)
T KOG1017|consen 254 VAPN 257 (267)
T ss_pred cCcc
Confidence 5443
No 102
>PRK06827 phosphoribosylpyrophosphate synthetase; Provisional
Probab=91.88 E-value=1.5 Score=43.33 Aligned_cols=142 Identities=11% Similarity=0.000 Sum_probs=87.5
Q ss_pred CcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCcee-----EEecc-CCCCCCCeEEEEEecCCchhHHHHHHHH
Q 020692 15 KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPN-----LYINS-AHDIRGQHVAFLASFSSPGVIFEQISVI 88 (322)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~-----v~v~~-~~~v~g~dv~iv~s~~~~~~l~elll~~ 88 (322)
..+.+-+-......|..+|..|| .++.-+.-.|..+++.+ +...+ +.++.|++|+|+-.+.+-..- +...+
T Consensus 208 ~~VVVsPD~Gg~~rA~~~A~~Lg-~~~ai~~K~R~~~~~~~g~~~~~~~~~~g~dV~gr~vIIVDDII~TG~T--l~~aa 284 (382)
T PRK06827 208 HLMVISPDTGAMDRAKYYASVLG-VDLGLFYKRRDYSRVVNGRNPIVAHEFLGRDVEGKDVLIVDDMIASGGS--MIDAA 284 (382)
T ss_pred CcEEEEECccchHHHHHHHHHhC-CCEEEEEcccCCcccccCCCceEEEecCCcccCCCEEEEEeCCcCcHHH--HHHHH
Confidence 34444444456789999999997 88887776664433211 22232 338999999999998765332 23468
Q ss_pred HHhhhcCccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCC--hhhhhcccCCCCCcccc
Q 020692 89 YALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIH--ALQERFYFSDHVLPLFE 166 (322)
Q Consensus 89 ~a~~~~~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlH--s~~~~g~f~~~v~~l~~ 166 (322)
..|++.||++|.++..+.-++ . .+-++.+..+ .+++|+|++-|-+ ....... ..+..+
T Consensus 285 ~~Lk~~GA~~V~~~~tH~vf~-~-------------a~~~l~~~~~--~g~i~~iv~TdTi~~~~~~~~~--~~~~~i-- 344 (382)
T PRK06827 285 KELKSRGAKKIIVAATFGFFT-N-------------GLEKFDKAYE--EGYFDRIIGTNLVYHPEELLSK--PWYIEV-- 344 (382)
T ss_pred HHHHHcCCCEEEEEEEeecCh-H-------------HHHHHHhhcc--cCCCCEEEEeCCCcCchhhccc--CCeEEE--
Confidence 889999999998887764443 1 2223333211 1248999998844 2221110 111122
Q ss_pred chHHHHHHHHhcC
Q 020692 167 TGIPLLKQRLHQL 179 (322)
Q Consensus 167 ~~~~~la~~l~~~ 179 (322)
+.++++|+.|.+.
T Consensus 345 sva~llA~~I~~~ 357 (382)
T PRK06827 345 DMSKLIARIIDAL 357 (382)
T ss_pred EcHHHHHHHHHHH
Confidence 5689999999774
No 103
>PLN02297 ribose-phosphate pyrophosphokinase
Probab=91.02 E-value=4.4 Score=39.17 Aligned_cols=127 Identities=13% Similarity=-0.026 Sum_probs=76.8
Q ss_pred eEeccCCchHHHHHHHhccC-Cc-------eEecCce-eee-eccCCCCCCeEEEEeccccChHhHH---HHHHHHHHcC
Q 020692 186 VIAFPDDGAWKRFHKMLDHF-PT-------VREGDKR-IVR-IKEGNPAGCHVVIVDDLVQSGGTLI---ECQKVLAAHG 252 (322)
Q Consensus 186 vvV~Pd~Ga~~ra~~~a~~L-~~-------~r~~~k~-~~~-~~~~~v~g~~vlivDDii~TG~Tl~---~~~~~L~~~G 252 (322)
+++-.-.+....|..++..+ +. .+..+.+ .+. ...+++.|++|+||-.+.+. ..+. -+++.|++.|
T Consensus 17 ~~i~~g~~~~~LA~~ia~~l~g~~l~~~~~~~FpDGE~~v~v~~~~~vrg~~V~ivqs~~~p-d~lmELLl~~dAlr~~g 95 (326)
T PLN02297 17 VHLFYCEETEELARKIAAESDAIELGSINWRKFPDGFPNLFINNAHGIRGQHVAFLASFSSP-AVIFEQLSVIYALPKLF 95 (326)
T ss_pred eEEEECCCCHHHHHHHHHHhCCCceeeeEEEECCCCCEEEEEcCCCCcCCCeEEEECCCCCC-hHHHHHHHHHHHHHHcC
Confidence 44444456778888888764 43 1233432 122 23468999999999886655 4443 4678999999
Q ss_pred CCeEEEEEEec-------cCCc------chHHHHhcc------cCCCccCCcCEEEEecCCcCchhhhccCCCeEE--Ee
Q 020692 253 AAKVSAYVTHG-------VFPK------GSWERFTLK------NGENMENAFANFWITDSCPLTVKAIANKAPFEV--LS 311 (322)
Q Consensus 253 a~~v~~~~tH~-------~~~~------~a~~~l~~s------~~~g~~~~~~~iv~Tdti~~~~~~~~~~~k~~~--~~ 311 (322)
|++|.++.-+- .|.+ ....++.++ | +++|++-|-......... ..++.- ++
T Consensus 96 a~~i~~ViPY~~YaRQDr~~~~ge~isak~vA~ll~~~~~~~~g-------~d~vitvDlH~~~~~~fF-~~~~~~l~l~ 167 (326)
T PLN02297 96 VASFTLVLPFFPTGTSERVEREGDVATAFTLARILSNIPISRGG-------PTSLVIFDIHALQERFYF-GDNVLPCFES 167 (326)
T ss_pred CCEEEEEeeCChhhcCCCCCCCCCCchHHHHHHHHhcccccccC-------CCEEEEEeCCChHHCCcc-CCcccchhhc
Confidence 99999987421 2222 223344433 4 689999998754221111 122332 37
Q ss_pred chHHHHHhhc
Q 020692 312 LAGSIADALQ 321 (322)
Q Consensus 312 va~~la~~i~ 321 (322)
..|.|++.|+
T Consensus 168 a~~~l~~~i~ 177 (326)
T PLN02297 168 GIPLLKKRLQ 177 (326)
T ss_pred cHHHHHHHHH
Confidence 7899998873
No 104
>PTZ00271 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=90.85 E-value=4.2 Score=36.82 Aligned_cols=93 Identities=12% Similarity=0.130 Sum_probs=60.7
Q ss_pred cEEEEecCCCHHHHHHHHHHcCC----cceeeeeEeeeCCC-----ceeEEeccCCCCCCCeEEEEEecCCchhHHHHHH
Q 020692 16 QVHLFYCVECEELARKVAAQSDL----ITLQSINWRNFADG-----WPNLYINSAHDIRGQHVAFLASFSSPGVIFEQIS 86 (322)
Q Consensus 16 ~~~i~~g~~~~~la~~ia~~lg~----~~~~~~~~~~FpdG-----E~~v~v~~~~~v~g~dv~iv~s~~~~~~l~elll 86 (322)
.+.|=-.+..-.+|..++++|+. +++..+.+..|-|| +..+...++.+++|++|+||-.+.+...-|. .
T Consensus 59 ~vivgVlkGg~~fa~dL~r~L~~~~~~~~vdfi~vssY~~~~~s~g~~~i~~~~~~~i~gk~VLIVDDIvDTG~TL~--~ 136 (211)
T PTZ00271 59 LYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASSYGTGVETSGQVRMLLDVRDSVENRHILIVEDIVDSAITLQ--Y 136 (211)
T ss_pred eEEEEEcCCCHHHHHHHHHHhcccCCCeeEEEEEEEecCCCCcccCceEEecCCCCCCCCCEEEEEecccCCHHHHH--H
Confidence 34444466788999999999841 24678888888654 3333334567899999999998876643322 3
Q ss_pred HHHHhhhcCccceEE-eeccCCCCc
Q 020692 87 VIYALPRLFVASFTL-VLPFFPTGS 110 (322)
Q Consensus 87 ~~~a~~~~~a~~i~~-viPY~~YsR 110 (322)
+++.|++.+++++.. ++=+-|-.|
T Consensus 137 v~~~l~~~~p~svk~avL~dK~~~r 161 (211)
T PTZ00271 137 LMRFMLAKKPASLKTVVLLDKPSGR 161 (211)
T ss_pred HHHHHHhcCCCEEEEEEEEEcccCC
Confidence 456666667888844 443334333
No 105
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed
Probab=89.56 E-value=4.7 Score=36.22 Aligned_cols=86 Identities=12% Similarity=0.040 Sum_probs=60.3
Q ss_pred cEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCC--CceeEEeccCCCCCCCeEEEEEecCCc-hhHHHHHHHHHHhh
Q 020692 16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNFAD--GWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALP 92 (322)
Q Consensus 16 ~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~Fpd--GE~~v~v~~~~~v~g~dv~iv~s~~~~-~~l~elll~~~a~~ 92 (322)
.+.+=-..+...++..+++.|+..+++.+...+... +....+.+++.++.|++|+++-++-.. ..+. ..++.++
T Consensus 72 ~vvV~IlrgG~~~~~~l~~~l~~~~~~~i~~~r~~~t~~~~~~~~~lp~~i~~~~VllvDd~laTG~Tl~---~ai~~L~ 148 (209)
T PRK00129 72 LVIVPILRAGLGMVDGVLKLIPSARVGHIGLYRDEETLEPVEYYVKLPEDIDERTVIVVDPMLATGGSAI---AAIDLLK 148 (209)
T ss_pred EEEEEEeCCCHHHHHHHHHhCCcCeeeeEEEEeCCCCCCCEEEEeeCCCcCCCCEEEEECCcccchHHHH---HHHHHHH
Confidence 334444566889999999999756778777766432 222345567889999999999887654 3343 3466778
Q ss_pred hcCccceEEeec
Q 020692 93 RLFVASFTLVLP 104 (322)
Q Consensus 93 ~~~a~~i~~viP 104 (322)
+.|+++|.++.-
T Consensus 149 ~~G~~~I~~~~l 160 (209)
T PRK00129 149 KRGAKNIKVLCL 160 (209)
T ss_pred HcCCCEEEEEEE
Confidence 889999987765
No 106
>PTZ00149 hypoxanthine phosphoribosyltransferase; Provisional
Probab=88.42 E-value=6.4 Score=36.41 Aligned_cols=97 Identities=8% Similarity=0.091 Sum_probs=62.3
Q ss_pred hhhhhccCCCcEEEEecCCCHHHHHHHHHHcCC----------cce---eeeeEeeeCC----CceeEEeccCCCCCCCe
Q 020692 6 EIKAKKSQKKQVHLFYCVECEELARKVAAQSDL----------ITL---QSINWRNFAD----GWPNLYINSAHDIRGQH 68 (322)
Q Consensus 6 ~~~~~~~~~~~~~i~~g~~~~~la~~ia~~lg~----------~~~---~~~~~~~Fpd----GE~~v~v~~~~~v~g~d 68 (322)
++..++..+..+.|=-.+..-.+|..+.+.|.. +++ ..+.++.|-| ||..+.-....++.|++
T Consensus 73 ~I~~dy~~~~~vilgILkGg~~FaadL~~~L~~~~~~~~~~~~~~~~~~dfi~vsSY~~~~s~g~v~i~~~~~~~l~gk~ 152 (241)
T PTZ00149 73 DIKQVYGNEELHILCILKGSRGFFSALVDYLNRIHNYSSTESPKPPYQEHYVRVKSYCNDESTGKLEIVSDDLSCLKDKH 152 (241)
T ss_pred HHHHHcCCCCeEEEEECCCCHHHHHHHHHHHhhhhhccccccCcccccccEEEEEEccCCCcCCceEEecccccccCCCE
Confidence 444555555556555566777888888888841 123 6677777754 54344323345789999
Q ss_pred EEEEEecCCchhHHHHHHHHHHhhhcCccceEEeec
Q 020692 69 VAFLASFSSPGVIFEQISVIYALPRLFVASFTLVLP 104 (322)
Q Consensus 69 v~iv~s~~~~~~l~elll~~~a~~~~~a~~i~~viP 104 (322)
|+||-.+.+....|. .+++.+++.|+++|.++.-
T Consensus 153 VLIVDDIidTG~Tl~--~~~~~L~~~g~~~V~va~L 186 (241)
T PTZ00149 153 VLIVEDIIDTGNTLV--KFCEYLKKFEPKTIRIATL 186 (241)
T ss_pred EEEEEeEeChHHHHH--HHHHHHHhcCCCEEEEEEE
Confidence 999998876644332 2346678889998866553
No 107
>PLN02440 amidophosphoribosyltransferase
Probab=85.21 E-value=14 Score=37.53 Aligned_cols=126 Identities=13% Similarity=0.089 Sum_probs=74.4
Q ss_pred CCcEEEEecCCCHHHHHHHHHHcCCcceeee-eEeeeC------------CCceeEEecc-CCCCCCCeEEEEEecCCch
Q 020692 14 KKQVHLFYCVECEELARKVAAQSDLITLQSI-NWRNFA------------DGWPNLYINS-AHDIRGQHVAFLASFSSPG 79 (322)
Q Consensus 14 ~~~~~i~~g~~~~~la~~ia~~lg~~~~~~~-~~~~Fp------------dGE~~v~v~~-~~~v~g~dv~iv~s~~~~~ 79 (322)
+.++.+-.-.+...+|..+++.+| +++... .-.++. ++....+... ...++|++|+||.....-.
T Consensus 275 ~~d~vvpVP~s~~~~A~~la~~lg-iP~~~~lvr~ry~~rt~i~~~q~~r~~~~~~k~~~~~~~v~gk~VlLVDDiittG 353 (479)
T PLN02440 275 DCDVVIPVPDSGRVAALGYAAKLG-VPFQQGLIRSHYVGRTFIEPSQKIRDFSVKLKLNPVRSVLEGKRVVVVDDSIVRG 353 (479)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHhC-CCchhheEEEeeccccccCcchhhhhhhheeeeecccccccCceEEEEeceeCcH
Confidence 345555444556789999999996 887522 123332 1222232222 2468999999998776554
Q ss_pred hHHHHHHHHHHhhhcCccceEEeecc--------CCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCCh
Q 020692 80 VIFEQISVIYALPRLFVASFTLVLPF--------FPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHA 150 (322)
Q Consensus 80 ~l~elll~~~a~~~~~a~~i~~viPY--------~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs 150 (322)
.-+. .+++.|+++||++|.+++-- ++..=.+|.+.-+.-.+...+++.| |+|.+....+..
T Consensus 354 tTl~--~i~~~L~~aGa~~V~v~v~~p~~~~p~~~G~d~p~~~~li~~~~~~~ei~~~~--------~~dsl~~l~~~~ 422 (479)
T PLN02440 354 TTSS--KIVRMLREAGAKEVHMRIASPPIIASCYYGVDTPSREELISNRMSVEEIRKFI--------GCDSLAFLPLED 422 (479)
T ss_pred HHHH--HHHHHHHhcCCCEEEEEEECCcccccceeeccCCCHHHHhhcCCCHHHHHHHh--------CCCEEEEecHHH
Confidence 3333 25788999999988776542 2222233433323335566677766 467777776554
No 108
>PRK09123 amidophosphoribosyltransferase; Provisional
Probab=84.81 E-value=15 Score=37.46 Aligned_cols=124 Identities=15% Similarity=0.055 Sum_probs=71.7
Q ss_pred CCcEEEEecCCCHHHHHHHHHHcCCcceeeeeE-eeeC----------CCceeEEecc---CCCCCCCeEEEEEecCCch
Q 020692 14 KKQVHLFYCVECEELARKVAAQSDLITLQSINW-RNFA----------DGWPNLYINS---AHDIRGQHVAFLASFSSPG 79 (322)
Q Consensus 14 ~~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~-~~Fp----------dGE~~v~v~~---~~~v~g~dv~iv~s~~~~~ 79 (322)
+..+++--..+...+|..+++.+| +++...-+ .++- ..+..+++.. .+.++|++|++|.....-.
T Consensus 295 ~~D~Vv~VP~sg~~~A~~la~~lg-ip~~~~lir~~y~grt~i~~~q~~r~~~v~~k~~~~~~~~~gk~vvlvDD~i~tG 373 (479)
T PRK09123 295 DADVVVPVPDSGVPAAIGYAQESG-IPFELGIIRNHYVGRTFIQPTQQIRNLGVKLKHNANRAVIEGKRVVLVDDSIVRG 373 (479)
T ss_pred CCeEEEEcCccHHHHHHHHHHhcC-CCeeheEEEEeecCccccccccccccccEEEEecccccccCCCEEEEEeceeCch
Confidence 344555444556789999999997 88753222 2332 0111233322 3347899999998765543
Q ss_pred hHHHHHHHHHHhhhcCccceEEee-----ccCCCCccc---hhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecC
Q 020692 80 VIFEQISVIYALPRLFVASFTLVL-----PFFPTGSFE---RMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDI 148 (322)
Q Consensus 80 ~l~elll~~~a~~~~~a~~i~~vi-----PY~~YsRqd---r~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~Vdl 148 (322)
.-+. .+++.|+++||++|.+.+ -|-.|.--| +...-+.-.+...+++.| |+|.+....+
T Consensus 374 ~Tl~--~~~~~l~~~Ga~~v~~~~~~p~~~~~~~~gid~~~~~~l~~~~~~~~ei~~~i--------gadsl~yls~ 440 (479)
T PRK09123 374 TTSR--KIVQMLRDAGAKEVHLRIASPPITHPCFYGIDTPERSKLLAATHSLEEMAEYI--------GADSLAFLSI 440 (479)
T ss_pred HHHH--HHHHHHHHcCCCEEEEEEcCCCCccceeecCCCCCHHHHHHcCCCHHHHHHHh--------CCCeEeccCH
Confidence 3222 468889999999999888 344444422 210011223566666666 3566655543
No 109
>TIGR01090 apt adenine phosphoribosyltransferase. A phylogenetic analysis suggested omitting the bi-directional best hit homologs from the spirochetes from the seed for this model and making only tentative predictions of adenine phosphoribosyltransferase function for this lineage.
Probab=84.09 E-value=12 Score=32.35 Aligned_cols=83 Identities=11% Similarity=-0.040 Sum_probs=50.8
Q ss_pred cEEEEecCCCHHHHHHHHHHcCCcceeeeeEeee------------CCCceeEEeccCCCCCCCeEEEEEecCCch-hHH
Q 020692 16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNF------------ADGWPNLYINSAHDIRGQHVAFLASFSSPG-VIF 82 (322)
Q Consensus 16 ~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~F------------pdGE~~v~v~~~~~v~g~dv~iv~s~~~~~-~l~ 82 (322)
++.+=.....-.+|..+|+.|| +++..+....+ .+|+..+.+......+|++|+||-.+.+.. .+.
T Consensus 48 d~ivgi~~~G~~~A~~la~~L~-~~~~~i~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDIitTG~Tl~ 126 (169)
T TIGR01090 48 DYIVGPEARGFIFGAALAYKLG-VGFVPVRKPGKLPGETISASYDLEYGKDQLEIHKDAIKPGQRVLIVDDLLATGGTAE 126 (169)
T ss_pred CEEEeehhccHHHHHHHHHHHC-CCEEEEEeCCCCCCceeeeEEeeccCceEEEEehhhcCCcCEEEEEeccccchHHHH
Confidence 3333333445689999999996 88754433222 233323444323345899999998887664 343
Q ss_pred HHHHHHHHhhhcCccceEEe
Q 020692 83 EQISVIYALPRLFVASFTLV 102 (322)
Q Consensus 83 elll~~~a~~~~~a~~i~~v 102 (322)
+ +++.+++.|++.+.++
T Consensus 127 ~---a~~~L~~~Ga~~v~~~ 143 (169)
T TIGR01090 127 A---TDELIRKLGGEVVEAA 143 (169)
T ss_pred H---HHHHHHHcCCEEEEEE
Confidence 3 5677888888765443
No 110
>PRK05205 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Provisional
Probab=84.09 E-value=16 Score=31.75 Aligned_cols=88 Identities=16% Similarity=0.146 Sum_probs=54.7
Q ss_pred CcEEEEecCCCHHHHHHHHHHcC---Cc--ceeeeeEeeeCCCc-----e-eEE-eccCCCCCCCeEEEEEecCCchhHH
Q 020692 15 KQVHLFYCVECEELARKVAAQSD---LI--TLQSINWRNFADGW-----P-NLY-INSAHDIRGQHVAFLASFSSPGVIF 82 (322)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~lg---~~--~~~~~~~~~FpdGE-----~-~v~-v~~~~~v~g~dv~iv~s~~~~~~l~ 82 (322)
..+.+-.......+|..+++.|+ ++ ++..+....|-|+. . .++ ..++.++.|++|+|+-.+.+...-|
T Consensus 32 ~~viv~il~gG~~~a~~La~~L~~~~~~~~~~~~l~~~~y~~~~~~~~~~~~~~~~~l~~~v~gr~VLIVDDIidTG~Tl 111 (176)
T PRK05205 32 NLVLVGIKTRGVWLAERLAERLEQLEGVDVPVGELDITLYRDDLTKKGLHPQVKPTDIPFDIEGKRVILVDDVLYTGRTI 111 (176)
T ss_pred CeEEEEEccCCHHHHHHHHHHHHHHcCCCCccceEEEEEeecCccccCcccccccccCCCCCCCCEEEEEecccCcHHHH
Confidence 44555555667889999999994 13 25566666665542 1 111 2344578999999999887664322
Q ss_pred HHHHHHHHhhhcC-ccceEEeec
Q 020692 83 EQISVIYALPRLF-VASFTLVLP 104 (322)
Q Consensus 83 elll~~~a~~~~~-a~~i~~viP 104 (322)
. .+++.+++.| ++++..+.-
T Consensus 112 ~--~~~~~L~~~G~~~~v~~avL 132 (176)
T PRK05205 112 R--AALDALFDYGRPARVQLAVL 132 (176)
T ss_pred H--HHHHHHHhcCCCcEEEEEEE
Confidence 2 3457777777 677755444
No 111
>PRK07272 amidophosphoribosyltransferase; Provisional
Probab=83.96 E-value=6.6 Score=40.04 Aligned_cols=124 Identities=13% Similarity=0.129 Sum_probs=73.3
Q ss_pred cEEEEecCCCHHHHHHHHHHcCCcceeeeeE------eee--CCC---ceeEEec---cCCCCCCCeEEEEEecCCchhH
Q 020692 16 QVHLFYCVECEELARKVAAQSDLITLQSINW------RNF--ADG---WPNLYIN---SAHDIRGQHVAFLASFSSPGVI 81 (322)
Q Consensus 16 ~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~------~~F--pdG---E~~v~v~---~~~~v~g~dv~iv~s~~~~~~l 81 (322)
.+.+---++...+|..+|+.+| +++..--+ ++| |.. +.+++.. +...++|++|++|.....-..-
T Consensus 287 D~VvpVPnqa~~lA~~la~~lg-ip~~~~lvk~~~~~rt~~~~~q~~R~~~vr~~f~~~~~~~~gk~vllVDDvittG~T 365 (484)
T PRK07272 287 DIVIGVPNSSLSAASGYAEESG-LPYEMGLVKNQYVARTFIQPTQELREQGVRMKLSAVSGVVKGKRVVMVDDSIVRGTT 365 (484)
T ss_pred CEEEEecHHHHHHHHHHHHHHC-CCcccCeEEEccCCccccCCCHHHHHHHHhhCccccccccCCCEEEEEccccCchHH
Confidence 4444333456689999999997 88743221 344 221 1122222 2456889999999776554333
Q ss_pred HHHHHHHHHhhhcCccceEEeec--------cCCCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCCh
Q 020692 82 FEQISVIYALPRLFVASFTLVLP--------FFPTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHA 150 (322)
Q Consensus 82 ~elll~~~a~~~~~a~~i~~viP--------Y~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs 150 (322)
+. -.+..++++||+.|.+.+- |++..++.+...-..-.+...+++.+ |+|.+..+.+..
T Consensus 366 ~~--~~~~~L~~~Ga~~v~~~~~~p~~~~~c~ygid~~~~~~lia~~~~~~ei~~~~--------~~dsl~~~~~~~ 432 (484)
T PRK07272 366 SR--RIVQLLKEAGAKEVHVAIASPELKYPCFYGIDIQTRRELISANHSVEEICDII--------GADSLTYLSVDG 432 (484)
T ss_pred HH--HHHHHHHhcCCcEEEEEEeCCccccChhhhccCcCHHHHHhcCCCHHHHHHHh--------CCCEEEEecHHH
Confidence 22 3577899999999988877 55555555432112223455666665 457776666544
No 112
>PRK02304 adenine phosphoribosyltransferase; Provisional
Probab=82.61 E-value=15 Score=31.82 Aligned_cols=81 Identities=15% Similarity=0.044 Sum_probs=50.1
Q ss_pred cEEEEecCCCHHHHHHHHHHcCCcceeeeeEee-eC-----------CCceeEEeccCCCCCCCeEEEEEecCCchhHHH
Q 020692 16 QVHLFYCVECEELARKVAAQSDLITLQSINWRN-FA-----------DGWPNLYINSAHDIRGQHVAFLASFSSPGVIFE 83 (322)
Q Consensus 16 ~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~-Fp-----------dGE~~v~v~~~~~v~g~dv~iv~s~~~~~~l~e 83 (322)
.+.+=...+.-.+|..+|..|| .++.-+.-.+ ++ .|+..+++.-...++|++|+||..+.+...-
T Consensus 53 d~Ivgv~~~Gi~~a~~la~~l~-~p~~~~rk~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~g~~VLIVDDivtTG~T-- 129 (175)
T PRK02304 53 DKIVGIEARGFIFGAALAYKLG-IGFVPVRKPGKLPRETISESYELEYGTDTLEIHKDAIKPGDRVLIVDDLLATGGT-- 129 (175)
T ss_pred CEEEEEccchHHHHHHHHHHhC-CCEEEEEcCCCCCCceEeEEEecccCceEEEEchhhcCCCCEEEEEeCCccccHH--
Confidence 4444334456789999999996 8876433221 11 1333444432234789999999988765332
Q ss_pred HHHHHHHhhhcCccce
Q 020692 84 QISVIYALPRLFVASF 99 (322)
Q Consensus 84 lll~~~a~~~~~a~~i 99 (322)
+.-+++.++++|++.+
T Consensus 130 l~~~~~~l~~~Ga~~v 145 (175)
T PRK02304 130 LEAAIKLLERLGAEVV 145 (175)
T ss_pred HHHHHHHHHHcCCEEE
Confidence 2335677788888654
No 113
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=82.48 E-value=19 Score=32.26 Aligned_cols=85 Identities=12% Similarity=0.042 Sum_probs=59.9
Q ss_pred EEEEe-cCCCHHHHHHHHHHcCCcceeeeeEeeeCC-Cc-eeEEeccCCCCCCCeEEEEEecCCc-hhHHHHHHHHHHhh
Q 020692 17 VHLFY-CVECEELARKVAAQSDLITLQSINWRNFAD-GW-PNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALP 92 (322)
Q Consensus 17 ~~i~~-g~~~~~la~~ia~~lg~~~~~~~~~~~Fpd-GE-~~v~v~~~~~v~g~dv~iv~s~~~~-~~l~elll~~~a~~ 92 (322)
+.+++ ..+...++..+.+.++..+++.+...+... ++ ...+.++++++.|++|+++.++-.. ..+ ...++.++
T Consensus 70 i~~V~ILrgg~~~~~~l~~~l~~~~v~~i~~~r~~~t~~~~~~~~~lp~~i~~~~VllvDd~laTG~Tl---~~ai~~L~ 146 (207)
T TIGR01091 70 IVLVPILRAGLGMVDGVLKLIPEAKVGHVGAYRNEETLKPVPYYSKLPEDIDERTVIVLDPMLATGGTM---IAALDLLK 146 (207)
T ss_pred EEEEEEeCCcHHHHHHHHHhCCcCceeEEEEEeCCCCCCCEEEEecCCCCCCCCEEEEECCCccchHHH---HHHHHHHH
Confidence 44444 456789999999999766777776655422 22 2345567889999999999887654 333 34577888
Q ss_pred hcCccceEEeec
Q 020692 93 RLFVASFTLVLP 104 (322)
Q Consensus 93 ~~~a~~i~~viP 104 (322)
+.|+++|.++..
T Consensus 147 ~~G~~~I~v~~l 158 (207)
T TIGR01091 147 KRGAKKIKVLSI 158 (207)
T ss_pred HcCCCEEEEEEE
Confidence 889999888766
No 114
>PF15610 PRTase_3: PRTase ComF-like
Probab=82.30 E-value=1.7 Score=40.68 Aligned_cols=40 Identities=23% Similarity=0.354 Sum_probs=35.0
Q ss_pred CCCCCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEE
Q 020692 221 GNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYV 260 (322)
Q Consensus 221 ~~v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~ 260 (322)
..++||.||.+|||--||++=....+.+++.|++....+-
T Consensus 134 ~~l~gk~lIflDDIkITGshE~~V~~~~~~~~~~~~~~yl 173 (274)
T PF15610_consen 134 EFLSGKHLIFLDDIKITGSHEDKVRKILKEYGLENDFIYL 173 (274)
T ss_pred HHhCCcEEEEeccEEecCcHHHHHHHHHHHcCccccEEEE
Confidence 3479999999999999999999999999999999854443
No 115
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=79.77 E-value=28 Score=27.53 Aligned_cols=79 Identities=20% Similarity=0.175 Sum_probs=51.8
Q ss_pred cCCCHHHHHHHHHHcCCcceeeeeEee----------eCCCceeEEeccCCCCCCCeEEEEEecCCc-hhHHHHHHHHHH
Q 020692 22 CVECEELARKVAAQSDLITLQSINWRN----------FADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYA 90 (322)
Q Consensus 22 g~~~~~la~~ia~~lg~~~~~~~~~~~----------FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~-~~l~elll~~~a 90 (322)
..+.-.+|..+|..|+ .+........ ...+.........+.+.|++|+|+..+.+. ..+.+ .++.
T Consensus 35 ~~~G~~~a~~la~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~vliVDDvi~tG~Tl~~---~~~~ 110 (125)
T PF00156_consen 35 PRGGIPLAAALARALG-IPLVFVRKRKSYYPGSDKTSREKNNQELFIIDKEDIKGKRVLIVDDVIDTGGTLKE---AIEL 110 (125)
T ss_dssp TTTTHHHHHHHHHHHT-HEEEEEEEEEEEESEEEEEEEETEEEEEEEEESSSGTTSEEEEEEEEESSSHHHHH---HHHH
T ss_pred hhccHHHHHHHHHHhC-CCccceeeeecccccchhhhhccCceEEeecccccccceeEEEEeeeEcccHHHHH---HHHH
Confidence 3457789999999996 7765443321 112211222334678899999999987665 34444 4678
Q ss_pred hhhcCccceEEeec
Q 020692 91 LPRLFVASFTLVLP 104 (322)
Q Consensus 91 ~~~~~a~~i~~viP 104 (322)
+++.|++.+.++..
T Consensus 111 L~~~g~~~v~~~vl 124 (125)
T PF00156_consen 111 LKEAGAKVVGVAVL 124 (125)
T ss_dssp HHHTTBSEEEEEEE
T ss_pred HHhCCCcEEEEEEE
Confidence 88999988876643
No 116
>PRK08341 amidophosphoribosyltransferase; Provisional
Probab=78.03 E-value=16 Score=36.89 Aligned_cols=86 Identities=13% Similarity=0.038 Sum_probs=53.8
Q ss_pred CcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeC--------C-CceeEEec---cCCCCCCCeEEEEEecCCchhHH
Q 020692 15 KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFA--------D-GWPNLYIN---SAHDIRGQHVAFLASFSSPGVIF 82 (322)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~Fp--------d-GE~~v~v~---~~~~v~g~dv~iv~s~~~~~~l~ 82 (322)
..+++-.-.+...+|..+|+.+| +++...-+++.. . -+..++.+ +...++|++|++|.....-...+
T Consensus 272 ~D~Vv~VPdsg~~~A~~~a~~lg-ip~~~~l~k~r~~~rtfi~~~qr~~~~~~k~~~~~~~v~gk~VlLVDD~IttGtTl 350 (442)
T PRK08341 272 GDVVIAVPDSGRTAALGFAHESG-IPYMEGLIKNRYIGRTFIMPSGRELKVKLKLSPVREVINGKRVVLVDDSIVRGTTM 350 (442)
T ss_pred CceEEEecCchHHHHHHHHHHhC-CCchheEEEeccccccccCcCchhhhheeeecccccccCCCEEEEEeeeeccHHHH
Confidence 34443333345579999999997 888653333221 1 22222222 24567899999998765443333
Q ss_pred HHHHHHHHhhhcCccceEEee
Q 020692 83 EQISVIYALPRLFVASFTLVL 103 (322)
Q Consensus 83 elll~~~a~~~~~a~~i~~vi 103 (322)
. .+++.|+++||++|.+.+
T Consensus 351 ~--~~~~~L~~aGAk~V~~~~ 369 (442)
T PRK08341 351 K--RIVKMLRDAGAREVHVRI 369 (442)
T ss_pred H--HHHHHHHhcCCcEEEEEE
Confidence 2 267899999999998876
No 117
>PRK02277 orotate phosphoribosyltransferase-like protein; Provisional
Probab=77.80 E-value=17 Score=32.32 Aligned_cols=84 Identities=14% Similarity=0.081 Sum_probs=53.9
Q ss_pred cEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCcee-EE--ec-cCCCCCCCeEEEEEecCCc-hhHHHHHHHHHH
Q 020692 16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPN-LY--IN-SAHDIRGQHVAFLASFSSP-GVIFEQISVIYA 90 (322)
Q Consensus 16 ~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~-v~--v~-~~~~v~g~dv~iv~s~~~~-~~l~elll~~~a 90 (322)
.+.+=...+.-.+|..+|..|| .++..+.-+++..|+.. .. +. ....++|++|+||..+.+. ..+.+. ++.
T Consensus 87 D~Ivgi~~gG~~~A~~lA~~L~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~gk~VlIVDDVitTG~Tl~~a---i~~ 162 (200)
T PRK02277 87 DVVVGIAKSGVPLATLVADELG-KDLAIYHPKKWDHGEGEKKTGSFSRNFASVEGKRCVIVDDVITSGTTMKET---IEY 162 (200)
T ss_pred CEEEeeccCCHHHHHHHHHHhC-CCcEEEecccccccccccccceeccccccCCcCEEEEEeeccCchHHHHHH---HHH
Confidence 4544444557799999999996 88876665555333211 11 11 1135789999999987665 345443 567
Q ss_pred hhhcCccceEEee
Q 020692 91 LPRLFVASFTLVL 103 (322)
Q Consensus 91 ~~~~~a~~i~~vi 103 (322)
+++.|++.+.++.
T Consensus 163 l~~~Ga~~v~v~v 175 (200)
T PRK02277 163 LKEHGGKPVAVVV 175 (200)
T ss_pred HHHcCCEEEEEEE
Confidence 7888987765443
No 118
>PRK13811 orotate phosphoribosyltransferase; Provisional
Probab=77.57 E-value=24 Score=30.64 Aligned_cols=76 Identities=18% Similarity=0.155 Sum_probs=52.7
Q ss_pred CCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCc-hhHHHHHHHHHHhhhcCccceEEe
Q 020692 24 ECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPRLFVASFTLV 102 (322)
Q Consensus 24 ~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~-~~l~elll~~~a~~~~~a~~i~~v 102 (322)
..-++|..+|..|| .++.-+.-.+...|+..... .+++|+.|+||....+. ..+.+ .++.++++|++ +..+
T Consensus 66 gGi~~A~~~a~~l~-~p~~~~rK~~k~~g~~~~~~---g~~~g~~VlIVDDvi~TG~T~~~---~~~~l~~~Ga~-v~~~ 137 (170)
T PRK13811 66 GGVPLAVAVSLAAG-KPYAIIRKEAKDHGKAGLII---GDVKGKRVLLVEDVTTSGGSALY---GIEQLRAAGAV-VDDV 137 (170)
T ss_pred CcHHHHHHHHHHHC-CCEEEEecCCCCCCCcceEE---cccCCCEEEEEEecccccHHHHH---HHHHHHHCCCe-EEEE
Confidence 36689999999996 88877766666677644433 46899999999987665 44444 46777888874 4444
Q ss_pred eccCC
Q 020692 103 LPFFP 107 (322)
Q Consensus 103 iPY~~ 107 (322)
+-...
T Consensus 138 ~~~vd 142 (170)
T PRK13811 138 VTVVD 142 (170)
T ss_pred EEEEE
Confidence 43333
No 119
>PRK08525 amidophosphoribosyltransferase; Provisional
Probab=77.14 E-value=22 Score=35.79 Aligned_cols=93 Identities=11% Similarity=0.041 Sum_probs=56.5
Q ss_pred CcEEEEecCCCHHHHHHHHHHcCCcceeeeeE-eeeC-----CCc-------eeEEecc-CCCCCCCeEEEEEecCCchh
Q 020692 15 KQVHLFYCVECEELARKVAAQSDLITLQSINW-RNFA-----DGW-------PNLYINS-AHDIRGQHVAFLASFSSPGV 80 (322)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~-~~Fp-----dGE-------~~v~v~~-~~~v~g~dv~iv~s~~~~~~ 80 (322)
.++.+..-.+...+|..+|+.|| +++...-+ +++. +.+ ...++.. .+.+.|++|+||.....-..
T Consensus 276 ~d~Vv~vPd~g~~~A~~~A~~lg-ip~~~~l~rk~~~~r~~i~~~qr~rn~~~~~~~~~~~~~v~gK~VlLVDDvitTG~ 354 (445)
T PRK08525 276 ADFVVPVPDSGVPAAIGYAQESG-IPFEMAIVRNHYVGRTFIEPTQEMRNLKVKLKLNPMSKVLEGKRIVVIDDSIVRGT 354 (445)
T ss_pred CCeEEECCchHHHHHHHHHHHhC-CCccceEEEeeccccccCCHHHHHHhhheeEEecccccccCCCeEEEEecccCcHH
Confidence 33333333345688999999997 87642112 1111 111 1122222 34588999999988765543
Q ss_pred HHHHHHHHHHhhhcCccceEEeeccCCCCc
Q 020692 81 IFEQISVIYALPRLFVASFTLVLPFFPTGS 110 (322)
Q Consensus 81 l~elll~~~a~~~~~a~~i~~viPY~~YsR 110 (322)
.|. -+++.|+++||++|.+++..-+.+.
T Consensus 355 Tl~--~a~~~Lr~aGA~~V~v~~~hp~~~~ 382 (445)
T PRK08525 355 TSK--KIVSLLRAAGAKEIHLRIACPEIKF 382 (445)
T ss_pred HHH--HHHHHHHhcCCCEEEEEEECCCcCC
Confidence 332 3678899999999998876655444
No 120
>PRK05793 amidophosphoribosyltransferase; Provisional
Probab=75.80 E-value=20 Score=36.38 Aligned_cols=90 Identities=10% Similarity=0.018 Sum_probs=55.5
Q ss_pred cEEEEecCCCHHHHHHHHHHcCCcceeeeeE-eee-------CCC---ceeEEec---cCCCCCCCeEEEEEecCCchhH
Q 020692 16 QVHLFYCVECEELARKVAAQSDLITLQSINW-RNF-------ADG---WPNLYIN---SAHDIRGQHVAFLASFSSPGVI 81 (322)
Q Consensus 16 ~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~-~~F-------pdG---E~~v~v~---~~~~v~g~dv~iv~s~~~~~~l 81 (322)
.+.+-.-.+...+|..+|+.+| +++...-+ .++ |+. +..++++ +...++|++|++|.....-..-
T Consensus 290 D~Vv~vPdsg~~~A~~~A~~lg-ip~~~~l~r~~~~~rtfi~~~q~~R~~~~~~k~~~~~~~v~gk~VlLVDD~ItTGtT 368 (469)
T PRK05793 290 DIVIGVPDSGIPAAIGYAEASG-IPYGIGFIKNKYVGRTFIAPSQELRERAVRVKLNPLKVNVEGKRVVLIDDSIVRGTT 368 (469)
T ss_pred CEEEEcCccHHHHHHHHHHHhC-CCEeeeEEEeeeccccccChhHhhhhhhheEecccCccccCCCEEEEEccccCchHH
Confidence 3433333345689999999997 98864212 221 111 1112222 2356889999999876554433
Q ss_pred HHHHHHHHHhhhcCccceEEeeccCCC
Q 020692 82 FEQISVIYALPRLFVASFTLVLPFFPT 108 (322)
Q Consensus 82 ~elll~~~a~~~~~a~~i~~viPY~~Y 108 (322)
|. -++..|+++||++|.+.+-.-|.
T Consensus 369 l~--~~~~~Lr~aGAk~V~~~~~~p~~ 393 (469)
T PRK05793 369 SK--RLVELLRKAGAKEVHFRVSSPPV 393 (469)
T ss_pred HH--HHHHHHHHcCCCEEEEEEECCCc
Confidence 33 36889999999999887655443
No 121
>PF14572 Pribosyl_synth: Phosphoribosyl synthetase-associated domain; PDB: 2H07_B 2H06_B 3S5J_B 2HCR_A 3EFH_A 2H08_A 1DKR_B 1DKU_B 1IBS_B 2JI4_A ....
Probab=73.72 E-value=19 Score=31.97 Aligned_cols=94 Identities=13% Similarity=0.122 Sum_probs=56.6
Q ss_pred cCCCCCCCeEEEEEecCCc-hhHHHHHHHHHHhhhcCccceEEeeccCCCCccchhccCCCcccHHHHHHHHhcCCCCCC
Q 020692 60 SAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFTMARILSNIPTSRG 138 (322)
Q Consensus 60 ~~~~v~g~dv~iv~s~~~~-~~l~elll~~~a~~~~~a~~i~~viPY~~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~ 138 (322)
+-.+|.|++++|+..+.+. ..++ ..++.|++.||++|.++.-+-=++- + .. +.|+. +
T Consensus 77 vVGDV~gk~~IIvDDiIdtg~Tl~---~aA~~Lk~~GA~~V~~~aTHgvfs~--------~-----A~-~~l~~-----s 134 (184)
T PF14572_consen 77 VVGDVKGKICIIVDDIIDTGGTLI---KAAELLKERGAKKVYACATHGVFSG--------D-----AP-ERLEE-----S 134 (184)
T ss_dssp EES--TTSEEEEEEEEESSTHHHH---HHHHHHHHTTESEEEEEEEEE---T--------T-----HH-HHHHH-----S
T ss_pred EEEEccCCeEeeecccccchHHHH---HHHHHHHHcCCCEEEEEEeCcccCc--------h-----HH-HHHhh-----c
Confidence 3479999999999988654 4443 4688999999999999887654432 1 22 33443 2
Q ss_pred CCcEEEEecC--ChhhhhcccCCCCCccccchHHHHHHHHhcC
Q 020692 139 GPTSLVIYDI--HALQERFYFSDHVLPLFETGIPLLKQRLHQL 179 (322)
Q Consensus 139 g~d~Ii~Vdl--Hs~~~~g~f~~~v~~l~~~~~~~la~~l~~~ 179 (322)
.+|.|++-|- |..+.... ..+..+ +-+++||+.|.+.
T Consensus 135 ~Id~vvvTnTIp~~~~~~~~--~Ki~vl--dis~llaeaI~ri 173 (184)
T PF14572_consen 135 PIDEVVVTNTIPQEEQKLQC--PKIKVL--DISPLLAEAIRRI 173 (184)
T ss_dssp SESEEEEETTS--HHHHHH---TTEEEE----HHHHHHHHHHH
T ss_pred CCeEEEEeccccCchhhhcC--CCEeEe--ehHHHHHHHHHHH
Confidence 6799999884 33322211 122222 4688999998764
No 122
>PRK13812 orotate phosphoribosyltransferase; Provisional
Probab=71.57 E-value=37 Score=29.66 Aligned_cols=76 Identities=12% Similarity=0.070 Sum_probs=50.5
Q ss_pred cEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCC-CCCeEEEEEecCCc-hhHHHHHHHHHHhhh
Q 020692 16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDI-RGQHVAFLASFSSP-GVIFEQISVIYALPR 93 (322)
Q Consensus 16 ~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v-~g~dv~iv~s~~~~-~~l~elll~~~a~~~ 93 (322)
...+=...+.-++|..+|..|| .++.-..-.+-..|+... +. ..+ +|++|+||-.+-+. ..+.+ +++.+++
T Consensus 60 d~ivg~~~ggi~lA~~lA~~l~-~p~~~~rk~~k~yg~~~~-~~--g~~~~g~~VlIVDDvitTG~Tl~~---~~~~l~~ 132 (176)
T PRK13812 60 TKLAGVALGAVPLVAVTSVETG-VPYVIARKQAKEYGTGNR-IE--GRLDEGEEVVVLEDIATTGQSAVD---AVEALRE 132 (176)
T ss_pred CEEEEeecchHHHHHHHHHHHC-CCEEEEeccCCcCCCCCe-EE--ecCCCcCEEEEEEEeeCCCHHHHH---HHHHHHH
Confidence 4443344456789999999997 888766665555565333 22 344 79999999887654 44544 4677788
Q ss_pred cCccc
Q 020692 94 LFVAS 98 (322)
Q Consensus 94 ~~a~~ 98 (322)
.|++-
T Consensus 133 ~Ga~v 137 (176)
T PRK13812 133 AGATV 137 (176)
T ss_pred CCCeE
Confidence 88753
No 123
>TIGR01367 pyrE_Therm orotate phosphoribosyltransferase, Thermus family. This model represents a distinct clade of orotate phosphoribosyltransferases. Members include the experimentally determined example from Thermus aquaticus and additional examples from Caulobacter crescentus, Helicobacter pylori, Mesorhizobium loti, and related species.
Probab=70.97 E-value=67 Score=28.28 Aligned_cols=80 Identities=16% Similarity=0.012 Sum_probs=50.4
Q ss_pred CCcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCchh-HHHHHHHHHHhh
Q 020692 14 KKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGV-IFEQISVIYALP 92 (322)
Q Consensus 14 ~~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~~~-l~elll~~~a~~ 92 (322)
+.++.+=...+.-.+|..+|..|+ .++.-. ++.. |+..+.... .-.+|++|+||..+.+... +.+ +++.++
T Consensus 58 ~~d~Ivgi~~gGi~~A~~la~~L~-~~~i~~--~k~~-~~~~~~~~~-~l~~G~~VLIVDDIi~TG~Tl~~---a~~~l~ 129 (187)
T TIGR01367 58 KVDFIVGPAMGGVILGYEVARQLS-VRSIFA--EREG-GGMKLRRGF-AVKPGEKFVAVEDVVTTGGSLLE---AIRAIE 129 (187)
T ss_pred CCCEEEEEccCcHHHHHHHHHHhC-CCeEEE--EEeC-CcEEEeecc-cCCCCCEEEEEEeeecchHHHHH---HHHHHH
Confidence 345555444567899999999996 776433 3333 543332221 1247999999998876543 333 456678
Q ss_pred hcCccceEE
Q 020692 93 RLFVASFTL 101 (322)
Q Consensus 93 ~~~a~~i~~ 101 (322)
+.|++.+.+
T Consensus 130 ~~Ga~vv~~ 138 (187)
T TIGR01367 130 GQGGQVVGL 138 (187)
T ss_pred HcCCeEEEE
Confidence 899876633
No 124
>PRK00455 pyrE orotate phosphoribosyltransferase; Validated
Probab=70.71 E-value=48 Score=29.39 Aligned_cols=81 Identities=16% Similarity=0.068 Sum_probs=50.7
Q ss_pred CcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCc-hhHHHHHHHHHHhhh
Q 020692 15 KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPR 93 (322)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~-~~l~elll~~~a~~~ 93 (322)
-++.+=...+.-.+|..+|..|+ +++.-..-.....|+. -.+. ....+|++|+||..+-.. ..+.+ +++.+++
T Consensus 65 ~d~Ivgi~~gG~~~A~~la~~L~-~~~~~~rk~~~~~g~~-~~~~-~~~~~g~~VliVDDvi~tG~Tl~~---~~~~l~~ 138 (202)
T PRK00455 65 FDVVAGPATGGIPLAAAVARALD-LPAIFVRKEAKDHGEG-GQIE-GRRLFGKRVLVVEDVITTGGSVLE---AVEAIRA 138 (202)
T ss_pred CCEEEecccCcHHHHHHHHHHhC-CCEEEEecccCCCCCC-ceEE-ccCCCCCEEEEEecccCCcHHHHH---HHHHHHH
Confidence 34444444567899999999996 8876554433333431 1222 234679999999887665 34444 3677778
Q ss_pred cCccceEE
Q 020692 94 LFVASFTL 101 (322)
Q Consensus 94 ~~a~~i~~ 101 (322)
.|++.+.+
T Consensus 139 ~Ga~~v~~ 146 (202)
T PRK00455 139 AGAEVVGV 146 (202)
T ss_pred cCCEEEEE
Confidence 88765433
No 125
>TIGR01134 purF amidophosphoribosyltransferase. Alternate name: glutamine phosphoribosylpyrophosphate (PRPP) amidotransferase.
Probab=67.98 E-value=69 Score=32.24 Aligned_cols=79 Identities=13% Similarity=0.082 Sum_probs=50.1
Q ss_pred CCCHHHHHHHHHHcCCcceeeeeEe------ee--CCCc---eeEEec---cCCCCCCCeEEEEEecCCchhHHHHHHHH
Q 020692 23 VECEELARKVAAQSDLITLQSINWR------NF--ADGW---PNLYIN---SAHDIRGQHVAFLASFSSPGVIFEQISVI 88 (322)
Q Consensus 23 ~~~~~la~~ia~~lg~~~~~~~~~~------~F--pdGE---~~v~v~---~~~~v~g~dv~iv~s~~~~~~l~elll~~ 88 (322)
.+....|..+|+.+| +++...-++ +| |+.+ ..++.. ....++|+.|+||.....-..-+. ..+
T Consensus 282 ~sg~~~A~~la~~lg-ip~~~~l~r~~~~~r~~i~~~q~~R~~~v~~k~~~~~~~~~gk~v~lvDD~ittG~T~~--~~~ 358 (442)
T TIGR01134 282 DSGRSAALGFAQASG-IPYREGLIKNRYVGRTFIMPTQELRELSVRLKLNPIREVFRGKRVVLVDDSIVRGTTSR--QIV 358 (442)
T ss_pred CCHHHHHHHHHHHhC-CCchHHeEEeccccccccCCCHHHHHHHHhhhcccccccCCCCEEEEEeccccccHHHH--HHH
Confidence 345678999999997 877542222 23 2221 011111 134578999999987655433322 357
Q ss_pred HHhhhcCccceEEeec
Q 020692 89 YALPRLFVASFTLVLP 104 (322)
Q Consensus 89 ~a~~~~~a~~i~~viP 104 (322)
..++++||+.|.+++.
T Consensus 359 ~~l~~~ga~~v~~~~~ 374 (442)
T TIGR01134 359 KMLRDAGAKEVHVRIA 374 (442)
T ss_pred HHHHHcCCcEEEEEEc
Confidence 8899999999988876
No 126
>PLN02293 adenine phosphoribosyltransferase
Probab=67.30 E-value=74 Score=28.09 Aligned_cols=81 Identities=11% Similarity=0.035 Sum_probs=49.4
Q ss_pred cEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCC------------ceeEEeccCCCC-CCCeEEEEEecCCc-hhH
Q 020692 16 QVHLFYCVECEELARKVAAQSDLITLQSINWRNFADG------------WPNLYINSAHDI-RGQHVAFLASFSSP-GVI 81 (322)
Q Consensus 16 ~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdG------------E~~v~v~~~~~v-~g~dv~iv~s~~~~-~~l 81 (322)
.+.+=.-...-.||..+|..|| .++.-+.-.+..+| +..+.+.. ..+ +|+.|+|+..+... ..+
T Consensus 64 d~Ivg~e~~Gi~lA~~lA~~Lg-~p~v~~rK~~k~~~~~~~~~~~~~~g~~~l~l~~-~~i~~G~rVlIVDDvitTG~T~ 141 (187)
T PLN02293 64 SVVAGIEARGFIFGPPIALAIG-AKFVPLRKPGKLPGEVISEEYVLEYGTDCLEMHV-GAVEPGERALVIDDLIATGGTL 141 (187)
T ss_pred CEEEEeCCCchHHHHHHHHHHC-CCEEEEEecCCCCCceEEEEEeccCCceEEEEEc-CccCCCCEEEEEeccccchHHH
Confidence 3333333446689999999997 88765554333223 22223332 234 79999999887655 344
Q ss_pred HHHHHHHHHhhhcCccceEE
Q 020692 82 FEQISVIYALPRLFVASFTL 101 (322)
Q Consensus 82 ~elll~~~a~~~~~a~~i~~ 101 (322)
.+ +++.+++.|++.+.+
T Consensus 142 ~~---~~~~l~~~Ga~~v~~ 158 (187)
T PLN02293 142 CA---AINLLERAGAEVVEC 158 (187)
T ss_pred HH---HHHHHHHCCCEEEEE
Confidence 33 457888888875433
No 127
>PLN02501 digalactosyldiacylglycerol synthase
Probab=58.27 E-value=76 Score=34.24 Aligned_cols=102 Identities=16% Similarity=0.125 Sum_probs=57.5
Q ss_pred cCCCHHHHHHHHHHcCCcceeeeeEeeeCCCcee--EEeccCCCCCCCeEEEEEecCCc----hhHHHHHHHHHHhhhcC
Q 020692 22 CVECEELARKVAAQSDLITLQSINWRNFADGWPN--LYINSAHDIRGQHVAFLASFSSP----GVIFEQISVIYALPRLF 95 (322)
Q Consensus 22 g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~--v~v~~~~~v~g~dv~iv~s~~~~----~~l~elll~~~a~~~~~ 95 (322)
.+++.+|--+||+-+. .. -++|.+|=.. .+-.+. -.+++|.|+-+-+-| ..+.-|+..+.-++. |
T Consensus 284 ~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~--~~~r~~~ivTtAslPWmTGtavnpL~rAayLa~~-~ 354 (794)
T PLN02501 284 DNHNDELDLRIASVLQ-ST-----GHCYDGGFWTDSSKHELS--DGKRHVAIVTTASLPWMTGTAVNPLFRAAYLAKS-A 354 (794)
T ss_pred ccccccchhhhhhhhh-cc-----CccccCCcccCccccccc--cCCCeEEEEEcccCcccccccccHHHHHHHhccc-C
Confidence 4455577778887663 21 1233333110 001111 125899998877766 345566666666554 5
Q ss_pred ccceEEeeccCCCCccchhccCCCcc-----cHHHHHHHHhc
Q 020692 96 VASFTLVLPFFPTGSFERMEEEGDVA-----TAFTMARILSN 132 (322)
Q Consensus 96 a~~i~~viPY~~YsRqdr~~~~ge~~-----sak~~a~lL~~ 132 (322)
-.+||+|+|+++.+-|...+-.+-.+ --.++-++|+.
T Consensus 355 ~~~VtlviPWl~~~dq~~vy~~~~~F~~p~eQe~~ir~wl~~ 396 (794)
T PLN02501 355 KQNVTLLVPWLCKSDQELVYPNNLTFSSPEEQESYIRNWLEE 396 (794)
T ss_pred CceEEEEEecCCccccccccCCCcccCCHHHHHHHHHHHHHH
Confidence 57899999999976555544322122 23356777753
No 128
>PRK12560 adenine phosphoribosyltransferase; Provisional
Probab=58.04 E-value=1.1e+02 Score=27.01 Aligned_cols=73 Identities=18% Similarity=0.141 Sum_probs=45.8
Q ss_pred CCCHHHHHHHHHHcCCcceeeeeEeeeCCC------------ceeEEeccCCCCCCCeEEEEEecCCc-hhHHHHHHHHH
Q 020692 23 VECEELARKVAAQSDLITLQSINWRNFADG------------WPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIY 89 (322)
Q Consensus 23 ~~~~~la~~ia~~lg~~~~~~~~~~~FpdG------------E~~v~v~~~~~v~g~dv~iv~s~~~~-~~l~elll~~~ 89 (322)
...-.+|..+|..++ .++......+++.. ..+-.+......+|++|+||..+-.. ..+. -+++
T Consensus 60 ~~Gi~lA~~vA~~l~-~p~~~~rk~~~~~~~~~~~~~~~~~~~~eg~~~~~~~~~G~rVlIVDDvitTG~T~~---~ai~ 135 (187)
T PRK12560 60 DKGAPLATPVSLLSG-KPLAMARWYPYSLSELNYNVVEIGSEYFEGVVYLNGIEKGDRVAIIDDTLSTGGTVI---ALIK 135 (187)
T ss_pred cccHHHHHHHHHhhC-CCEEEeccCCCcccceeEEeeeeeccceeeeeEccCCCCcCEEEEEEeccccCHHHH---HHHH
Confidence 346689999999996 88766554333322 11111222234579999999887655 3443 3567
Q ss_pred HhhhcCccce
Q 020692 90 ALPRLFVASF 99 (322)
Q Consensus 90 a~~~~~a~~i 99 (322)
.++++|+..+
T Consensus 136 ll~~aGa~vv 145 (187)
T PRK12560 136 AIENSGGIVS 145 (187)
T ss_pred HHHHCCCEEE
Confidence 8888888643
No 129
>TIGR00336 pyrE orotate phosphoribosyltransferase. The conserved Lys (K) residue at position 101 of the seed alignment has been proposed as the active site for the enzyme.
Probab=55.71 E-value=1e+02 Score=26.56 Aligned_cols=76 Identities=14% Similarity=0.061 Sum_probs=46.0
Q ss_pred CCCHHHHHHHHHHcCCcc-----eeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCch-hHHHHHHHHHHhhhcCc
Q 020692 23 VECEELARKVAAQSDLIT-----LQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPG-VIFEQISVIYALPRLFV 96 (322)
Q Consensus 23 ~~~~~la~~ia~~lg~~~-----~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~~-~l~elll~~~a~~~~~a 96 (322)
.+.-.+|..+|..|+ .+ +.-+.-.....|+... +. .+..+|+.|+||..+.+.. .+.+ .++.++++|+
T Consensus 63 ~gG~~~A~~la~~l~-~~~~~~~~~~~rk~~k~~g~~~~-~~-g~~~~g~~VlIVDDvi~TG~Tl~~---a~~~l~~~Ga 136 (173)
T TIGR00336 63 LGGIPIATAVSVKLA-KPGGDIPLCFNRKEAKDHGEGGN-IE-GELLEGDKVVVVEDVITTGTSILE---AVEIIQAAGG 136 (173)
T ss_pred cChHHHHHHHHHHhc-CcCCCceEEEEcCCcccCCCCCc-ee-cCCCCCCEEEEEeccccChHHHHH---HHHHHHHcCC
Confidence 346689999999996 77 3333222223354332 21 2345799999999887653 4444 4677888886
Q ss_pred cceEEeecc
Q 020692 97 ASFTLVLPF 105 (322)
Q Consensus 97 ~~i~~viPY 105 (322)
+ +..++-.
T Consensus 137 ~-v~~~~vl 144 (173)
T TIGR00336 137 Q-VAGVIIA 144 (173)
T ss_pred e-EEEEEEE
Confidence 4 4333333
No 130
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=54.24 E-value=31 Score=28.48 Aligned_cols=37 Identities=27% Similarity=0.407 Sum_probs=32.7
Q ss_pred cCCCCCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEE
Q 020692 220 EGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYV 260 (322)
Q Consensus 220 ~~~v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~ 260 (322)
.++++|++++|+ -+|++-..++..|.+.|+++|+++.
T Consensus 7 ~~~l~~~~vlvi----GaGg~ar~v~~~L~~~g~~~i~i~n 43 (135)
T PF01488_consen 7 FGDLKGKRVLVI----GAGGAARAVAAALAALGAKEITIVN 43 (135)
T ss_dssp HSTGTTSEEEEE----SSSHHHHHHHHHHHHTTSSEEEEEE
T ss_pred cCCcCCCEEEEE----CCHHHHHHHHHHHHHcCCCEEEEEE
Confidence 457899999986 5899999999999999999998875
No 131
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=51.41 E-value=31 Score=29.34 Aligned_cols=43 Identities=16% Similarity=0.299 Sum_probs=34.7
Q ss_pred HHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEe
Q 020692 241 LIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWIT 291 (322)
Q Consensus 241 l~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~T 291 (322)
+..+.+.|+++|+..|.+++ =|+.+++-.++|++.| +++|+.-
T Consensus 80 ~~~lve~lre~G~~~i~v~~-GGvip~~d~~~l~~~G-------~~~if~p 122 (143)
T COG2185 80 VPGLVEALREAGVEDILVVV-GGVIPPGDYQELKEMG-------VDRIFGP 122 (143)
T ss_pred HHHHHHHHHHhCCcceEEee-cCccCchhHHHHHHhC-------cceeeCC
Confidence 45688999999999999443 4677777788999998 7899943
No 132
>PRK09246 amidophosphoribosyltransferase; Provisional
Probab=51.34 E-value=80 Score=32.35 Aligned_cols=82 Identities=9% Similarity=0.060 Sum_probs=50.4
Q ss_pred EEecC-CCHHHHHHHHHHcCCcceeeeeEee-e-----C--C---CceeEEec---cCCCCCCCeEEEEEecCCchhHHH
Q 020692 19 LFYCV-ECEELARKVAAQSDLITLQSINWRN-F-----A--D---GWPNLYIN---SAHDIRGQHVAFLASFSSPGVIFE 83 (322)
Q Consensus 19 i~~g~-~~~~la~~ia~~lg~~~~~~~~~~~-F-----p--d---GE~~v~v~---~~~~v~g~dv~iv~s~~~~~~l~e 83 (322)
|++-+ +...+|..+|+.+| +++..--+++ + - + .+.+++.. ....++|++|++|.....-...+.
T Consensus 297 VvpVP~s~~~~A~~la~~lg-ip~~~~l~k~~~~~rt~i~~~q~~R~~~vr~~f~~~~~~v~gK~VlLVDDvitTGaTl~ 375 (501)
T PRK09246 297 VIPIPDTSRDAALEIARILG-VPYREGFVKNRYVGRTFIMPGQAQRKKSVRQKLNAIRAEFKGKNVLLVDDSIVRGTTSE 375 (501)
T ss_pred EEEeCccHHHHHHHHHHHHC-CCccceEEEEecccccccCcCHHHHHHHHHhhcCCccccccCCeEEEEeccccccHHHH
Confidence 33444 35678999999997 8875332222 2 1 1 01011111 245688999999987665443332
Q ss_pred HHHHHHHhhhcCccceEEee
Q 020692 84 QISVIYALPRLFVASFTLVL 103 (322)
Q Consensus 84 lll~~~a~~~~~a~~i~~vi 103 (322)
-++.+|+++||++|.+++
T Consensus 376 --~~~~~L~~aGA~~V~v~v 393 (501)
T PRK09246 376 --QIVQMAREAGAKKVYFAS 393 (501)
T ss_pred --HHHHHHHHcCCCEEEEEE
Confidence 267899999999987764
No 133
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=50.64 E-value=20 Score=28.50 Aligned_cols=81 Identities=12% Similarity=0.078 Sum_probs=49.2
Q ss_pred cCCCcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCchhHHHHHHHHHHh
Q 020692 12 SQKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYAL 91 (322)
Q Consensus 12 ~~~~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~~~l~elll~~~a~ 91 (322)
.+.+.+.++..-++..+|...+.++ .++++....-++.++.. -.....+.-.|++|+-|.+.. --|++..+..+
T Consensus 3 ~~~~~i~i~G~G~s~~~A~~~~~~l--~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~vi~is~sg~--~~~~~~~~~~a 76 (131)
T PF01380_consen 3 AKAKRIYIYGSGSSYGVAQYAALKL--QKLGRIVVISYEAGEFF--HGPLENLDPDDLVIIISYSGE--TRELIELLRFA 76 (131)
T ss_dssp TTSSEEEEEESTHHHHHHHHHHHHH--HHHHSSEEEEEEHHHHH--TTGGGGCSTTEEEEEEESSST--THHHHHHHHHH
T ss_pred CCCCEEEEEEcchHHHHHHHHHHHH--HHhcCcceeccchHHHh--hhhcccccccceeEeeecccc--chhhhhhhHHH
Confidence 3556777777767888999988888 35555555555555411 111234445788888875443 22444455678
Q ss_pred hhcCccc
Q 020692 92 PRLFVAS 98 (322)
Q Consensus 92 ~~~~a~~ 98 (322)
++.|++-
T Consensus 77 k~~g~~v 83 (131)
T PF01380_consen 77 KERGAPV 83 (131)
T ss_dssp HHTTSEE
T ss_pred HhcCCeE
Confidence 8888653
No 134
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=48.40 E-value=37 Score=28.26 Aligned_cols=49 Identities=16% Similarity=0.215 Sum_probs=36.4
Q ss_pred ChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecC
Q 020692 237 SGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDS 293 (322)
Q Consensus 237 TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdt 293 (322)
+...+...++.|+++|...+.+++ -|...+.-.+.+.+.| +++++.+.|
T Consensus 66 ~~~~~~~~~~~L~~~g~~~i~viv-GG~~~~~~~~~l~~~G-------vd~~~~~gt 114 (132)
T TIGR00640 66 HLTLVPALRKELDKLGRPDILVVV-GGVIPPQDFDELKEMG-------VAEIFGPGT 114 (132)
T ss_pred hHHHHHHHHHHHHhcCCCCCEEEE-eCCCChHhHHHHHHCC-------CCEEECCCC
Confidence 456678889999999987665554 4555555577899988 899996666
No 135
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=48.03 E-value=38 Score=24.87 Aligned_cols=34 Identities=21% Similarity=0.145 Sum_probs=27.9
Q ss_pred CCCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEE
Q 020692 223 PAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAY 259 (322)
Q Consensus 223 v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~ 259 (322)
-+++.+++++ .+|.....++..|++.|-..|+.+
T Consensus 54 ~~~~~iv~~c---~~g~~a~~~~~~l~~~G~~~v~~l 87 (100)
T smart00450 54 DKDKPVVVYC---RSGNRSAKAAWLLRELGFKNVYLL 87 (100)
T ss_pred CCCCeEEEEe---CCCcHHHHHHHHHHHcCCCceEEe
Confidence 4678899988 578888899999999999986643
No 136
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=47.79 E-value=1.5e+02 Score=25.56 Aligned_cols=76 Identities=21% Similarity=0.118 Sum_probs=44.8
Q ss_pred CCCCCCeEEEEeccccChHhHHH-HHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCchh
Q 020692 221 GNPAGCHVVIVDDLVQSGGTLIE-CQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVK 299 (322)
Q Consensus 221 ~~v~g~~vlivDDii~TG~Tl~~-~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~~~ 299 (322)
++++||+|+|| -.|.+.-. +++.|++.|+ +|++ ++.-+ ++-.+.+.++ |=||++=.-|+..+
T Consensus 40 ~~l~gk~vlVi----G~G~~~G~~~a~~L~~~g~-~V~v--~~r~~-~~l~~~l~~a---------DiVIsat~~~~ii~ 102 (168)
T cd01080 40 IDLAGKKVVVV----GRSNIVGKPLAALLLNRNA-TVTV--CHSKT-KNLKEHTKQA---------DIVIVAVGKPGLVK 102 (168)
T ss_pred CCCCCCEEEEE----CCcHHHHHHHHHHHhhCCC-EEEE--EECCc-hhHHHHHhhC---------CEEEEcCCCCceec
Confidence 57899999987 35666555 8899999998 4444 33332 3444455554 56776665555221
Q ss_pred hhccCCCeEEEech
Q 020692 300 AIANKAPFEVLSLA 313 (322)
Q Consensus 300 ~~~~~~k~~~~~va 313 (322)
.-.-.+...++|++
T Consensus 103 ~~~~~~~~viIDla 116 (168)
T cd01080 103 GDMVKPGAVVIDVG 116 (168)
T ss_pred HHHccCCeEEEEcc
Confidence 10112345566665
No 137
>PRK07349 amidophosphoribosyltransferase; Provisional
Probab=47.60 E-value=1.3e+02 Score=30.96 Aligned_cols=77 Identities=12% Similarity=0.053 Sum_probs=48.9
Q ss_pred CCHHHHHHHHHHcCCcceeeeeEeeeCCC-----------ceeEEec---cCCCCCCCeEEEEEecCCchhHHHHHHHHH
Q 020692 24 ECEELARKVAAQSDLITLQSINWRNFADG-----------WPNLYIN---SAHDIRGQHVAFLASFSSPGVIFEQISVIY 89 (322)
Q Consensus 24 ~~~~la~~ia~~lg~~~~~~~~~~~FpdG-----------E~~v~v~---~~~~v~g~dv~iv~s~~~~~~l~elll~~~ 89 (322)
+...+|..+|+.+| +++...-+++.--| +..++.. +.+.++|+.|++|.....-..-+. .++.
T Consensus 322 sg~~~A~g~A~~lg-ip~~~~L~r~~y~grtfi~p~q~~R~~~~~~kl~~~~~~~~gkrVlLVDDvIttGtTl~--~~~~ 398 (500)
T PRK07349 322 SGIPAAIGFSQASG-IPYAEGLIKNRYVGRTFIQPTQSMRESGIRMKLNPLKDVLAGKRIIIVDDSIVRGTTSR--KIVK 398 (500)
T ss_pred ccHHHHHHHHHHHC-CCchhceEEEeccCccccCCCHHHHHhhhheeeeccccccCCCEEEEEeceeCCcHHHH--HHHH
Confidence 35578999999997 98864334332121 1011111 245678999999987654433222 3578
Q ss_pred HhhhcCccceEEee
Q 020692 90 ALPRLFVASFTLVL 103 (322)
Q Consensus 90 a~~~~~a~~i~~vi 103 (322)
+|+++||+.|.+-+
T Consensus 399 ~Lr~aGAkeV~~~i 412 (500)
T PRK07349 399 ALRDAGATEVHMRI 412 (500)
T ss_pred HHHHhCCeEEEEEe
Confidence 99999999987764
No 138
>cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily. Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.
Probab=46.30 E-value=35 Score=25.60 Aligned_cols=32 Identities=19% Similarity=0.192 Sum_probs=27.6
Q ss_pred CCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEE
Q 020692 224 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSA 258 (322)
Q Consensus 224 ~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~ 258 (322)
+++.++++.. +|.+...++..|++.|-..|+.
T Consensus 55 ~~~~ivv~c~---~g~~s~~a~~~l~~~G~~~v~~ 86 (96)
T cd01444 55 RDRPVVVYCY---HGNSSAQLAQALREAGFTDVRS 86 (96)
T ss_pred CCCCEEEEeC---CCChHHHHHHHHHHcCCceEEE
Confidence 6778899877 8889999999999999988764
No 139
>cd00158 RHOD Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.
Probab=45.93 E-value=43 Score=24.25 Aligned_cols=34 Identities=18% Similarity=0.193 Sum_probs=28.0
Q ss_pred CCCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEE
Q 020692 223 PAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAY 259 (322)
Q Consensus 223 v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~ 259 (322)
-+++.|+++++- |.....++..|++.|-..++.+
T Consensus 48 ~~~~~vv~~c~~---~~~a~~~~~~l~~~G~~~v~~l 81 (89)
T cd00158 48 DKDKPIVVYCRS---GNRSARAAKLLRKAGGTNVYNL 81 (89)
T ss_pred CCCCeEEEEeCC---CchHHHHHHHHHHhCcccEEEe
Confidence 467889998876 7778889999999998888754
No 140
>KOG0814 consensus Glyoxylase [General function prediction only]
Probab=45.79 E-value=18 Score=32.04 Aligned_cols=44 Identities=18% Similarity=0.233 Sum_probs=37.7
Q ss_pred eeccCCCCCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEec
Q 020692 217 RIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHG 263 (322)
Q Consensus 217 ~~~~~~v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~ 263 (322)
+.+.++.+.+..+|||.+..| ..+-++.+++.|-+-+|++-||-
T Consensus 23 tYll~d~~~~~AviIDPV~et---~~RD~qlikdLgl~LiYa~NTH~ 66 (237)
T KOG0814|consen 23 TYLLGDHKTGKAVIIDPVLET---VSRDAQLIKDLGLDLIYALNTHV 66 (237)
T ss_pred EEEeeeCCCCceEEecchhhc---ccchHHHHHhcCceeeeeeccee
Confidence 346788999999999999965 56778899999999999999985
No 141
>COG0856 Orotate phosphoribosyltransferase homologs [Nucleotide transport and metabolism]
Probab=45.70 E-value=89 Score=27.73 Aligned_cols=71 Identities=17% Similarity=0.066 Sum_probs=48.6
Q ss_pred CCHHHHHHHHHHcCCcceeeeeEeeeCCCce-----eEEeccCCCCCCCeEEEEEecCCc-hhHHHHHHHHHHhhhcCcc
Q 020692 24 ECEELARKVAAQSDLITLQSINWRNFADGWP-----NLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPRLFVA 97 (322)
Q Consensus 24 ~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~-----~v~v~~~~~v~g~dv~iv~s~~~~-~~l~elll~~~a~~~~~a~ 97 (322)
+.-+||..+|..|| .++.-..-++|-.-|- .+.=. =.+|.|++++|+....+. ..++|. +..+++.|++
T Consensus 96 sGvPlAtmvA~elg-~elaiY~PrK~~~de~~~~~G~iS~N-Fa~V~gK~cvIVDDvittG~Ti~E~---Ie~lke~g~k 170 (203)
T COG0856 96 SGVPLATMVAYELG-KELAIYHPRKHRKDEGAGKGGSISSN-FASVEGKRCVIVDDVITTGSTIKET---IEQLKEEGGK 170 (203)
T ss_pred cCccHHHHHHHHhC-CceEEEecccccccccCCcCceeecc-cccccCceEEEEecccccChhHHHH---HHHHHHcCCC
Confidence 45689999999997 7777666555544321 11111 247889999999987665 567775 5678888876
Q ss_pred ce
Q 020692 98 SF 99 (322)
Q Consensus 98 ~i 99 (322)
-+
T Consensus 171 pv 172 (203)
T COG0856 171 PV 172 (203)
T ss_pred cE
Confidence 44
No 142
>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.
Probab=44.88 E-value=43 Score=25.34 Aligned_cols=33 Identities=18% Similarity=0.071 Sum_probs=26.4
Q ss_pred CCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEE
Q 020692 224 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAY 259 (322)
Q Consensus 224 ~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~ 259 (322)
++++++++++ +|.....++..|++.|..+|+.+
T Consensus 55 ~~~~ivv~c~---~g~~s~~~~~~l~~~G~~~v~~l 87 (96)
T cd01529 55 RATRYVLTCD---GSLLARFAAQELLALGGKPVALL 87 (96)
T ss_pred CCCCEEEEeC---ChHHHHHHHHHHHHcCCCCEEEe
Confidence 5678899864 77888888899999998877553
No 143
>KOG1448 consensus Ribose-phosphate pyrophosphokinase [Nucleotide transport and metabolism; Amino acid transport and metabolism]
Probab=43.99 E-value=62 Score=30.94 Aligned_cols=91 Identities=9% Similarity=0.084 Sum_probs=54.1
Q ss_pred CcEEEEe-cCCCHHHHHHHHHHcCCcceeeeeE-eeeCCCceeEEeccCCCCCCCeEEEEEecCCc-hhHHHHHHHHHHh
Q 020692 15 KQVHLFY-CVECEELARKVAAQSDLITLQSINW-RNFADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYAL 91 (322)
Q Consensus 15 ~~~~i~~-g~~~~~la~~ia~~lg~~~~~~~~~-~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~-~~l~elll~~~a~ 91 (322)
.+..++| -...-.-+..+|.+|. ..+.-+.- ++=.+ |...+..+-.+|+|+.+++|..+.+. ..+. ..++.|
T Consensus 163 ~~~vivSPdaGgaKR~~s~ad~l~-~~fali~ker~k~~-~v~~~m~LVGDv~gkvailVDDm~dt~GTl~---~aa~~L 237 (316)
T KOG1448|consen 163 ENAVIVSPDAGGAKRVTSLADRLN-LDFALIHKERRKAN-EVDIRMVLVGDVKGKVAILVDDMADTCGTLI---KAADKL 237 (316)
T ss_pred cceEEECCCcchhhhhHHHHHhhc-chhhhhhhhhhccc-ccceEEEEEeccCCcEEEEecccccccchHH---HHHHHH
Confidence 4444444 3233344566677774 44433322 22222 32322334579999999999887543 3443 346677
Q ss_pred hhcCccceEEeeccCCCCc
Q 020692 92 PRLFVASFTLVLPFFPTGS 110 (322)
Q Consensus 92 ~~~~a~~i~~viPY~~YsR 110 (322)
.+.||++|.++.++-=++.
T Consensus 238 ~~~GA~kV~a~~THgVfs~ 256 (316)
T KOG1448|consen 238 LEHGAKKVYAIVTHGVFSG 256 (316)
T ss_pred HhcCCceEEEEEcceeccc
Confidence 7799999999998876654
No 144
>PRK11595 DNA utilization protein GntX; Provisional
Probab=43.78 E-value=90 Score=28.20 Aligned_cols=72 Identities=22% Similarity=0.184 Sum_probs=43.3
Q ss_pred HHHHHHHHHcCCcceeeeeEeeeCC--------Cc---eeE--EeccCCCCCCCeEEEEEecCCchh-HHHHHHHHHHhh
Q 020692 27 ELARKVAAQSDLITLQSINWRNFAD--------GW---PNL--YINSAHDIRGQHVAFLASFSSPGV-IFEQISVIYALP 92 (322)
Q Consensus 27 ~la~~ia~~lg~~~~~~~~~~~Fpd--------GE---~~v--~v~~~~~v~g~dv~iv~s~~~~~~-l~elll~~~a~~ 92 (322)
.+|+.+++.+| +++..--+.+-.+ .+ .++ .+.+..++.|++|+||..+.+-.. +.+ .+++++
T Consensus 136 ~la~~la~~~~-~~~~~~~l~r~~~~~~q~~l~~~~R~~n~~~~f~~~~~~~~~~vllvDDv~tTG~Tl~~---~~~~L~ 211 (227)
T PRK11595 136 LLCRPLARWLG-CDYDSEALTRTRATATQHFLSARLRKRNLKNAFRLELPVQGQHMAIVDDVVTTGSTVAE---IAQLLL 211 (227)
T ss_pred HHHHHHHHHHC-CCCcccceEEecCCCCcccCCHHHHhhhhhhhhccCCCCCCCEEEEEeeeecchHHHHH---HHHHHH
Confidence 67899999996 7653211111111 00 000 012235688999999988776543 433 577889
Q ss_pred hcCccceEEe
Q 020692 93 RLFVASFTLV 102 (322)
Q Consensus 93 ~~~a~~i~~v 102 (322)
+.|+++|.++
T Consensus 212 ~~g~~~V~~~ 221 (227)
T PRK11595 212 RNGAASVQVW 221 (227)
T ss_pred HcCCcEEEEE
Confidence 9999988765
No 145
>PRK13809 orotate phosphoribosyltransferase; Provisional
Probab=42.40 E-value=1.5e+02 Score=26.61 Aligned_cols=68 Identities=15% Similarity=0.057 Sum_probs=44.4
Q ss_pred CHHHHHHHHHHcCCcceeeeeEeeeCCCcee-EEeccCCCCCCCeEEEEEecCCc-hhHHHHHHHHHHhhhcCcc
Q 020692 25 CEELARKVAAQSDLITLQSINWRNFADGWPN-LYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPRLFVA 97 (322)
Q Consensus 25 ~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~-v~v~~~~~v~g~dv~iv~s~~~~-~~l~elll~~~a~~~~~a~ 97 (322)
.-++|..+|..+| .++....-..--.|+.. +++. ....+|++|+||..+-+. ..+.+ .++++++.|++
T Consensus 78 Gi~~A~~vA~~l~-~p~~~~RK~~K~~G~~~~~~~~-g~~~~g~~VlIVDDViTTG~Ti~~---a~~~L~~~G~~ 147 (206)
T PRK13809 78 ALTLATSISLKYN-IPMVLRRKELKNVDPSDAIKVE-GLFTPGQTCLVINDMVSSGKSIIE---TAVALEEEGLV 147 (206)
T ss_pred cHHHHHHHHHHhC-CCEEEEeCCCCCCCCcCEEEEc-cccCCCCEEEEEEeccccCHHHHH---HHHHHHHCCCE
Confidence 5689999999996 88876654333335432 3232 123578999999887554 44544 46677788876
No 146
>PRK07322 adenine phosphoribosyltransferase; Provisional
Probab=42.05 E-value=2.3e+02 Score=24.53 Aligned_cols=93 Identities=14% Similarity=0.090 Sum_probs=51.6
Q ss_pred CcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeee--CCCce------------eEE-ec--cCCCCCCCeEEEEEecCC
Q 020692 15 KQVHLFYCVECEELARKVAAQSDLITLQSINWRNF--ADGWP------------NLY-IN--SAHDIRGQHVAFLASFSS 77 (322)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~F--pdGE~------------~v~-v~--~~~~v~g~dv~iv~s~~~ 77 (322)
..+.+=...+.-.+|..+|..+| .++.-+.-.+- .+++. ... .. ....++|++|+||.....
T Consensus 53 ~d~Iv~v~~gGiplA~~lA~~L~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiit 131 (178)
T PRK07322 53 VDVLVTPETKGIPLAHALSRRLG-KPYVVARKSRKPYMQDPIIQEVVSITTGKPQLLVLDGADAEKLKGKRVAIVDDVVS 131 (178)
T ss_pred CCEEEEeccCCHHHHHHHHHHHC-CCEEEEEEeCCCCCCCceEEEEEEEEeccceEEEecCccccccCCCEEEEEecccc
Confidence 34443334446789999999996 88654332221 11210 010 11 112467999999998876
Q ss_pred chhHHHHHHHHHHhhhcCccceEEeeccCCCCcc
Q 020692 78 PGVIFEQISVIYALPRLFVASFTLVLPFFPTGSF 111 (322)
Q Consensus 78 ~~~l~elll~~~a~~~~~a~~i~~viPY~~YsRq 111 (322)
...-| .-+++.|+++|++.+.+ .=.+.|..+
T Consensus 132 TG~Tl--~aa~~~L~~~GA~~V~~-~~v~~~~~~ 162 (178)
T PRK07322 132 TGGTL--TALERLVERAGGQVVAK-AAIFAEGDA 162 (178)
T ss_pred ccHHH--HHHHHHHHHcCCEEEEE-EEEEEcCCC
Confidence 64333 24566789999875443 333344443
No 147
>PRK06781 amidophosphoribosyltransferase; Provisional
Probab=41.13 E-value=1.5e+02 Score=30.20 Aligned_cols=87 Identities=9% Similarity=0.015 Sum_probs=52.5
Q ss_pred CcEEEEecCCCHHHHHHHHHHcCCcceeeeeEe-ee-----C--CC---ceeEEe--c-cCCCCCCCeEEEEEecCCchh
Q 020692 15 KQVHLFYCVECEELARKVAAQSDLITLQSINWR-NF-----A--DG---WPNLYI--N-SAHDIRGQHVAFLASFSSPGV 80 (322)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~-~F-----p--dG---E~~v~v--~-~~~~v~g~dv~iv~s~~~~~~ 80 (322)
..+++-.-.+...+|..+|+.+| +++...-++ ++ . +. +.+++. . +.+.++|+.|++|.....-..
T Consensus 284 ~D~vv~VP~s~~~~A~~~a~~~g-ip~~~~lik~~~~~rt~~~~~~~~R~~~v~~~f~~~~~~i~gk~VlLVDDvittGt 362 (471)
T PRK06781 284 ADVVTGVPDSSISAAIGYAEATG-IPYELGLIKNRYVGRTFIQPSQELREQGVKMKLSAVRGVVEGKRVVMIDDSIVRGT 362 (471)
T ss_pred CcEEEEcChhHHHHHHHHHHHhC-CCcccceEEEccCCCCCcCCCHHHHHHHHhcceeccccccCCceEEEEeceeccch
Confidence 34444333345688999999997 887542222 22 2 11 111211 1 245678999999876544333
Q ss_pred HHHHHHHHHHhhhcCccceEEeec
Q 020692 81 IFEQISVIYALPRLFVASFTLVLP 104 (322)
Q Consensus 81 l~elll~~~a~~~~~a~~i~~viP 104 (322)
.+. .++.+|+++||++|.+.+-
T Consensus 363 Tl~--~~~~~Lk~aGA~eV~v~i~ 384 (471)
T PRK06781 363 TSK--RIVRMLREAGATEVHVRIA 384 (471)
T ss_pred HHH--HHHHHHHHcCCcEEEEEEC
Confidence 322 3678999999999988754
No 148
>PF10662 PduV-EutP: Ethanolamine utilisation - propanediol utilisation; InterPro: IPR012381 Members of this family function in ethanolamine [] and propanediol [] degradation pathways. Both pathways require coenzyme B12 (adenosylcobalamin, AdoCbl). Bacteria that harbour these pathways can use ethanolamine as a source of carbon and nitrogen, or propanediol as a sole carbon and energy source, respectively. The exact roles of the EutP and PduV proteins in these respective pathways are not yet determined. Members of this family contain P-loop consensus motifs in the N-terminal part, and are distantly related to various GTPases and ATPases, including ATPase components of transport systems. Propanediol degradation is thought to be important for the natural Salmonella populations, since propanediol is produced by the fermentation of the common plant sugars rhamnose and fucose [, ]. More than 1% of the Salmonella enterica genome is devoted to the utilisation of propanediol and cobalamin biosynthesis. In vivo expression technology has indicated that propanediol utilisation (pdu) genes may be important for growth in host tissues, and competitive index studies with mice have shown that pdu mutations confer a virulence defect [, ]. The pdu operon is contiguous and co-regulated with the cobalamin (B12) biosynthesis cob operon, indicating that propanediol catabolism may be the primary reason for de novo B12 synthesis in Salmonella [, , ]. Please see IPR003207 from INTERPRO, IPR003208 from INTERPRO, IPR009204 from INTERPRO, IPR009191 from INTERPRO, IPR009192 from INTERPRO for more details on the propanediol utilisation pathway and the pdu operon.; GO: 0005524 ATP binding, 0006576 cellular biogenic amine metabolic process
Probab=40.88 E-value=50 Score=28.08 Aligned_cols=41 Identities=15% Similarity=0.140 Sum_probs=32.8
Q ss_pred ccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcc
Q 020692 233 DLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLK 276 (322)
Q Consensus 233 Dii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s 276 (322)
|...+...+..+.+.|+.+|++.|+.+. ..++.+++.|.+.
T Consensus 100 Dl~~~~~~i~~a~~~L~~aG~~~if~vS---~~~~eGi~eL~~~ 140 (143)
T PF10662_consen 100 DLPSDDANIERAKKWLKNAGVKEIFEVS---AVTGEGIEELKDY 140 (143)
T ss_pred cCccchhhHHHHHHHHHHcCCCCeEEEE---CCCCcCHHHHHHH
Confidence 5555678899999999999999997776 5677888887653
No 149
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=39.28 E-value=1.5e+02 Score=22.28 Aligned_cols=34 Identities=12% Similarity=0.186 Sum_probs=25.1
Q ss_pred eEEEEeccccChHhHHHHHHHHHHc-CCCeEEEEE
Q 020692 227 HVVIVDDLVQSGGTLIECQKVLAAH-GAAKVSAYV 260 (322)
Q Consensus 227 ~vlivDDii~TG~Tl~~~~~~L~~~-Ga~~v~~~~ 260 (322)
.+.+++|...+=..+.++.+.|++. +..++.++.
T Consensus 13 ~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~ 47 (91)
T PF02875_consen 13 GPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVF 47 (91)
T ss_dssp TEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEE
Confidence 4677777888888999999999988 556666655
No 150
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=38.10 E-value=55 Score=24.90 Aligned_cols=28 Identities=18% Similarity=0.247 Sum_probs=23.2
Q ss_pred CCCeEEEEeccccChHhHHHHHHHHHHcCCC
Q 020692 224 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAA 254 (322)
Q Consensus 224 ~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~ 254 (322)
+++.++++ |.+|.....+++.|++.|..
T Consensus 60 ~~~~ivv~---C~~G~rs~~aa~~L~~~G~~ 87 (100)
T cd01523 60 DDQEVTVI---CAKEGSSQFVAELLAERGYD 87 (100)
T ss_pred CCCeEEEE---cCCCCcHHHHHHHHHHcCce
Confidence 46677775 78898889999999999986
No 151
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=38.04 E-value=2.2e+02 Score=25.40 Aligned_cols=72 Identities=18% Similarity=0.166 Sum_probs=51.3
Q ss_pred CCCcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCC-----CceeEEeccCCC-CCCCeEEEEEecCCchhHHHH
Q 020692 13 QKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFAD-----GWPNLYINSAHD-IRGQHVAFLASFSSPGVIFEQ 84 (322)
Q Consensus 13 ~~~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~Fpd-----GE~~v~v~~~~~-v~g~dv~iv~s~~~~~~l~el 84 (322)
.+..+.|--+...--.|+-||..||-.++.-+.+..+.+ ||..++-.+.-+ ++|++|+||..+.+...-|++
T Consensus 28 ~~PDvIiaiaRGG~~pariLsd~L~~~~l~~i~v~~y~~~~~~~~~~~v~~~~~~d~l~GkkVLIVDDI~DTG~Tl~~ 105 (192)
T COG2236 28 FKPDVIVAIARGGLIPARILSDFLGVKPLYSIKVEHYDETAERDGEAKVKYPITIDPLSGKKVLIVDDIVDTGETLEL 105 (192)
T ss_pred CCCCEEEEEcCCceehHHHHHHHhCCCceEEEEEEEehhhcccCCcceeecCccccccCCCeEEEEecccCchHhHHH
Confidence 456666666777778899999999733778888877765 344444444445 899999999998776554443
No 152
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=37.91 E-value=1.4e+02 Score=23.60 Aligned_cols=81 Identities=9% Similarity=-0.059 Sum_probs=45.1
Q ss_pred EEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCchhHHHHHHHHHHhhhcCc
Q 020692 17 VHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLFV 96 (322)
Q Consensus 17 ~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~~~l~elll~~~a~~~~~a 96 (322)
+.++..-++...|...+.+|. .++.....-++.+|... . ......+|++|+-|.+.. --|++.+++.+++.|+
T Consensus 2 I~i~G~G~S~~~a~~~~~~l~--~~~~~~~~~~~~~~~~~--~-~~~~~~~d~~I~iS~sG~--t~e~~~~~~~a~~~g~ 74 (126)
T cd05008 2 ILIVGCGTSYHAALVAKYLLE--RLAGIPVEVEAASEFRY--R-RPLLDEDTLVIAISQSGE--TADTLAALRLAKEKGA 74 (126)
T ss_pred EEEEEccHHHHHHHHHHHHHH--HhcCCceEEEehhHhhh--c-CCCCCCCcEEEEEeCCcC--CHHHHHHHHHHHHcCC
Confidence 344444445667777777663 33333343444444222 1 123556788888776543 1256667888898887
Q ss_pred cceEEeecc
Q 020692 97 ASFTLVLPF 105 (322)
Q Consensus 97 ~~i~~viPY 105 (322)
+ +.++..+
T Consensus 75 ~-vi~iT~~ 82 (126)
T cd05008 75 K-TVAITNV 82 (126)
T ss_pred e-EEEEECC
Confidence 4 5555543
No 153
>PRK07631 amidophosphoribosyltransferase; Provisional
Probab=36.56 E-value=2.2e+02 Score=29.00 Aligned_cols=78 Identities=10% Similarity=0.066 Sum_probs=49.6
Q ss_pred CCHHHHHHHHHHcCCcceeeeeEe------eeCCC-----ceeEEec---cCCCCCCCeEEEEEecCCchhHHHHHHHHH
Q 020692 24 ECEELARKVAAQSDLITLQSINWR------NFADG-----WPNLYIN---SAHDIRGQHVAFLASFSSPGVIFEQISVIY 89 (322)
Q Consensus 24 ~~~~la~~ia~~lg~~~~~~~~~~------~FpdG-----E~~v~v~---~~~~v~g~dv~iv~s~~~~~~l~elll~~~ 89 (322)
+...+|..+|+.+| +++...-++ .|..- +.+++.. ..+.++|+.|++|.....-...+. .++.
T Consensus 293 s~~~~A~gla~~~g-ip~~~~lik~~~~~Rt~i~~~~~~R~~nv~~~f~~~~~~v~gk~VlLVDDsittGtTl~--~~~~ 369 (475)
T PRK07631 293 SSISAAIGYAEATG-IPYELGLIKNRYVGRTFIQPSQALREQGVKMKLSPVRGVVEGKRVVMVDDSIVRGTTSR--RIVT 369 (475)
T ss_pred hHHHHHHHHHHHHC-CCcccceEEEecCCCCCcCCCHHHHHHHHhhhhhhcccccCCceEEEEeeeeccHHHHH--HHHH
Confidence 45578999999997 888642222 23322 1111111 145678999999977654433333 4578
Q ss_pred HhhhcCccceEEeec
Q 020692 90 ALPRLFVASFTLVLP 104 (322)
Q Consensus 90 a~~~~~a~~i~~viP 104 (322)
+|+++||++|.+.+-
T Consensus 370 ~L~~aGA~eV~v~~~ 384 (475)
T PRK07631 370 MLREAGATEVHVRIS 384 (475)
T ss_pred HHHHcCCCEEEEEEe
Confidence 999999999988754
No 154
>COG1751 Uncharacterized conserved protein [Function unknown]
Probab=35.41 E-value=57 Score=28.27 Aligned_cols=75 Identities=17% Similarity=0.158 Sum_probs=0.0
Q ss_pred cChHhHHHHHHHHHHcCCCeEEEEEEec--------cCCcchHHHHhcccCCCccCCcCEEEEecCCcCchhhhccCCCe
Q 020692 236 QSGGTLIECQKVLAAHGAAKVSAYVTHG--------VFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPF 307 (322)
Q Consensus 236 ~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~--------~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~~~~~~~~~k~ 307 (322)
+||.|..++.+.+... -+|.+++-|. -+.++..+.|.+.| ..|.|-|...+--.-.-..||
T Consensus 36 ~tG~tA~k~lemveg~--lkvVvVthh~Gf~e~g~~e~~~E~~~~L~erG---------a~v~~~sHalSg~eRsis~kf 104 (186)
T COG1751 36 STGYTALKALEMVEGD--LKVVVVTHHAGFEEKGTQEMDEEVRKELKERG---------AKVLTQSHALSGVERSISRKF 104 (186)
T ss_pred cccHHHHHHHHhcccC--ceEEEEEeecccccCCceecCHHHHHHHHHcC---------ceeeeehhhhhcchhhhhhhc
Q ss_pred EEEechHHHHHhhc
Q 020692 308 EVLSLAGSIADALQ 321 (322)
Q Consensus 308 ~~~~va~~la~~i~ 321 (322)
-=++=-+.||+.+|
T Consensus 105 GG~~p~eiiAetLR 118 (186)
T COG1751 105 GGYSPLEIIAETLR 118 (186)
T ss_pred CCcchHHHHHHHHH
No 155
>PRK06388 amidophosphoribosyltransferase; Provisional
Probab=34.83 E-value=2.6e+02 Score=28.46 Aligned_cols=77 Identities=10% Similarity=0.087 Sum_probs=47.9
Q ss_pred CHHHHHHHHHHcCCcceeeeeE------eeeC--CCc---eeEEec---cCCCCCCCeEEEEEecCCchhHHHHHHHHHH
Q 020692 25 CEELARKVAAQSDLITLQSINW------RNFA--DGW---PNLYIN---SAHDIRGQHVAFLASFSSPGVIFEQISVIYA 90 (322)
Q Consensus 25 ~~~la~~ia~~lg~~~~~~~~~------~~Fp--dGE---~~v~v~---~~~~v~g~dv~iv~s~~~~~~l~elll~~~a 90 (322)
....|..+|+.+| +++...-+ ++|- ..+ ..+++. +.+.+.|+.|++|.....-...+. -++++
T Consensus 302 ~~~~A~g~a~~~g-ip~~~~L~r~r~~~r~fi~~~q~~R~~~~~~kl~~~~~~i~gk~VlLVDDsittGtTl~--~~~~~ 378 (474)
T PRK06388 302 GRSQAIGFSMASG-IPYTEGLIKNRYSERTFIMPTQSDRKAAIKLKLNPIREVISGKRIVLVDDSIVRGNTMR--FIVKI 378 (474)
T ss_pred cHHHHHHHHHHhC-CCchhheEEecccCCcccCCchhhhhhceeEEeccccccccCceEEEEeCeECcHHHHH--HHHHH
Confidence 4467999999997 88743211 2222 211 113332 123567899999987655444333 46889
Q ss_pred hhhcCccceEEeec
Q 020692 91 LPRLFVASFTLVLP 104 (322)
Q Consensus 91 ~~~~~a~~i~~viP 104 (322)
|+++||+.|.+.+-
T Consensus 379 L~~aGak~V~~ri~ 392 (474)
T PRK06388 379 MRKYGAKEVHVRIG 392 (474)
T ss_pred HHHcCCCEEEEEeC
Confidence 99999999877653
No 156
>PRK07847 amidophosphoribosyltransferase; Provisional
Probab=34.75 E-value=2.6e+02 Score=28.78 Aligned_cols=78 Identities=15% Similarity=0.116 Sum_probs=50.0
Q ss_pred CCHHHHHHHHHHcCCcceeeeeEee------e--CC---CceeEEecc---CCCCCCCeEEEEEecCCchhHHHHHHHHH
Q 020692 24 ECEELARKVAAQSDLITLQSINWRN------F--AD---GWPNLYINS---AHDIRGQHVAFLASFSSPGVIFEQISVIY 89 (322)
Q Consensus 24 ~~~~la~~ia~~lg~~~~~~~~~~~------F--pd---GE~~v~v~~---~~~v~g~dv~iv~s~~~~~~l~elll~~~ 89 (322)
+....|..+|+.+| +++...-.+. | |. -+..+++++ .+.+.|+.|++|.....-...+. .++.
T Consensus 312 sG~~~A~g~a~~~g-ip~~~~l~kn~~~grtfi~~~q~~r~~~~r~k~~~~~~~~~gk~vllVDD~ittG~T~~--~~~~ 388 (510)
T PRK07847 312 SGTPAAVGYAQESG-IPFGQGLVKNAYVGRTFIQPSQTIRQLGIRLKLNPLREVIRGKRLVVVDDSIVRGNTQR--ALVR 388 (510)
T ss_pred chHHHHHHHHHHhC-CChhhceEeecccccCccCcchhhhhhceeeecCccccccCCCEEEEEecccCchHHHH--HHHH
Confidence 35678999999997 8875542221 1 11 111233332 44578999999987655443333 4688
Q ss_pred HhhhcCccceEEeec
Q 020692 90 ALPRLFVASFTLVLP 104 (322)
Q Consensus 90 a~~~~~a~~i~~viP 104 (322)
.|+++|+++|.+-+-
T Consensus 389 ~L~~~ga~~v~~ri~ 403 (510)
T PRK07847 389 MLREAGAAEVHVRIS 403 (510)
T ss_pred HHHHcCCCEEEEEEC
Confidence 899999999887653
No 157
>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.
Probab=34.67 E-value=76 Score=24.21 Aligned_cols=32 Identities=19% Similarity=0.170 Sum_probs=25.8
Q ss_pred CCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEE
Q 020692 224 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSA 258 (322)
Q Consensus 224 ~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~ 258 (322)
+++.++++. .+|.....++..|+++|.+.|+.
T Consensus 60 ~~~~ivvyC---~~G~rs~~a~~~L~~~G~~~v~~ 91 (101)
T cd01518 60 KGKKVLMYC---TGGIRCEKASAYLKERGFKNVYQ 91 (101)
T ss_pred CCCEEEEEC---CCchhHHHHHHHHHHhCCcceee
Confidence 667888886 47887788899999999887755
No 158
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=34.45 E-value=37 Score=32.07 Aligned_cols=52 Identities=13% Similarity=-0.024 Sum_probs=36.0
Q ss_pred ChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCc
Q 020692 237 SGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLT 297 (322)
Q Consensus 237 TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~ 297 (322)
.|+|-...++.+++.+...+.++..|++|-+.+..-+.+. ..+|.|++=..+
T Consensus 97 v~S~K~~v~~a~~~~~~~~~~~vg~HPM~G~~~~~~lf~~---------~~~vltp~~~~~ 148 (279)
T COG0287 97 VGSVKSSVVEAMEKYLPGDVRFVGGHPMFGPEADAGLFEN---------AVVVLTPSEGTE 148 (279)
T ss_pred cccccHHHHHHHHHhccCCCeeEecCCCCCCcccccccCC---------CEEEEcCCCCCC
Confidence 6677777777788888776688999999987533333332 277887775433
No 159
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=33.44 E-value=2.3e+02 Score=22.29 Aligned_cols=79 Identities=16% Similarity=0.011 Sum_probs=45.0
Q ss_pred EEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCchhHHHHHHHHHHhhhcCc
Q 020692 17 VHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLFV 96 (322)
Q Consensus 17 ~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~~~l~elll~~~a~~~~~a 96 (322)
+.++..-++..+|+.++.++. .++ ....-..++|. +. .....+.-+|++|+-|.+.. --|++-++..||+.|+
T Consensus 3 I~i~G~G~S~~~a~~~~~~l~--~~g-~~~~~~~~~~~-~~-~~~~~~~~~d~vi~iS~sG~--t~~~~~~~~~a~~~g~ 75 (128)
T cd05014 3 VVVTGVGKSGHIARKIAATLS--STG-TPAFFLHPTEA-LH-GDLGMVTPGDVVIAISNSGE--TDELLNLLPHLKRRGA 75 (128)
T ss_pred EEEEeCcHhHHHHHHHHHHhh--cCC-CceEEcccchh-hc-cccCcCCCCCEEEEEeCCCC--CHHHHHHHHHHHHCCC
Confidence 556665567788888888873 233 22223455542 11 11234555788888877543 1244455677888886
Q ss_pred cceEEee
Q 020692 97 ASFTLVL 103 (322)
Q Consensus 97 ~~i~~vi 103 (322)
+ +.++.
T Consensus 76 ~-vi~iT 81 (128)
T cd05014 76 P-IIAIT 81 (128)
T ss_pred e-EEEEe
Confidence 5 44443
No 160
>cd01532 4RHOD_Repeat_1 Member of the Rhodanese Homology Domain superfamily, repeat 1. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 1st repeat which does not contain the putative catalytic Cys residue.
Probab=32.22 E-value=76 Score=23.93 Aligned_cols=32 Identities=19% Similarity=0.328 Sum_probs=24.3
Q ss_pred CCCeEEEEeccccChHh--HHHHHHHHHHcCCCeEEE
Q 020692 224 AGCHVVIVDDLVQSGGT--LIECQKVLAAHGAAKVSA 258 (322)
Q Consensus 224 ~g~~vlivDDii~TG~T--l~~~~~~L~~~Ga~~v~~ 258 (322)
+++.++++. .+|.. ...++..|++.|...|+.
T Consensus 49 ~~~~ivl~c---~~G~~~~s~~aa~~L~~~G~~~v~~ 82 (92)
T cd01532 49 RDTPIVVYG---EGGGEDLAPRAARRLSELGYTDVAL 82 (92)
T ss_pred CCCeEEEEe---CCCCchHHHHHHHHHHHcCccCEEE
Confidence 466788885 46653 578889999999998874
No 161
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=31.71 E-value=81 Score=24.04 Aligned_cols=33 Identities=12% Similarity=0.180 Sum_probs=27.0
Q ss_pred CCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEE
Q 020692 224 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAY 259 (322)
Q Consensus 224 ~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~ 259 (322)
+++.+++++ .+|.+...++..|+..|-+.|+.+
T Consensus 65 ~~~~ivv~c---~~g~~s~~~~~~l~~~G~~~v~~~ 97 (106)
T cd01519 65 KDKELIFYC---KAGVRSKAAAELARSLGYENVGNY 97 (106)
T ss_pred CCCeEEEEC---CCcHHHHHHHHHHHHcCCccceec
Confidence 577888885 578888889999999999887654
No 162
>cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2. Subgroup 2 includes uncharacterized putative rhodanese-related domains.
Probab=31.48 E-value=92 Score=23.74 Aligned_cols=33 Identities=18% Similarity=0.304 Sum_probs=26.7
Q ss_pred CCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEE
Q 020692 224 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAY 259 (322)
Q Consensus 224 ~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~ 259 (322)
+++.++++.+ +|.....++..|++.|...|+.+
T Consensus 57 ~~~~vv~~c~---~g~rs~~~~~~l~~~G~~~v~~l 89 (101)
T cd01528 57 PDKDIVVLCH---HGGRSMQVAQWLLRQGFENVYNL 89 (101)
T ss_pred CCCeEEEEeC---CCchHHHHHHHHHHcCCccEEEe
Confidence 5778899864 68888889999999999877643
No 163
>PF14681 UPRTase: Uracil phosphoribosyltransferase; PDB: 1V9S_B 1UPF_A 1UPU_D 1JLR_B 1BD4_A 1BD3_C 1JLS_D 1XTV_C 1XTU_H 3G6W_C ....
Probab=29.35 E-value=4.1e+02 Score=23.60 Aligned_cols=84 Identities=15% Similarity=0.113 Sum_probs=56.3
Q ss_pred cEEEEe-cCCCHHHHHHHHHHcCCcceeeeeEeeeCC-CceeEE-eccCCCCCCCeEEEEEecCCc-hhHHHHHHHHHHh
Q 020692 16 QVHLFY-CVECEELARKVAAQSDLITLQSINWRNFAD-GWPNLY-INSAHDIRGQHVAFLASFSSP-GVIFEQISVIYAL 91 (322)
Q Consensus 16 ~~~i~~-g~~~~~la~~ia~~lg~~~~~~~~~~~Fpd-GE~~v~-v~~~~~v~g~dv~iv~s~~~~-~~l~elll~~~a~ 91 (322)
++.+++ ..+...|.+.+.+.+.+.+.+.+-+.+=+. +|..++ .++++++.++.|+++.++... ..++. .++.+
T Consensus 68 ~i~~V~IlRaG~~m~~~~~~~~p~a~~g~i~i~r~~~t~~p~~~y~~LP~~i~~~~VillDpmlaTG~s~~~---ai~~L 144 (207)
T PF14681_consen 68 KICIVPILRAGLPMLEGFREVFPDARVGHIGIQRDEETLEPVLYYNKLPEDIENRKVILLDPMLATGGSAIA---AIEIL 144 (207)
T ss_dssp CEEEEEETTTHHHHHHHHHHHSTTSEEEEEEEEEETTTSSEEEEEEE--TTGTTSEEEEEESEESSSHHHHH---HHHHH
T ss_pred cEEEEEEeCCcHHHHHHHHHhCCCcceEEEEEEEcCCccceeeeHhhCCCCccCCEEEEEeccccchhhHHH---HHHHH
Confidence 555555 455678999999999888999998877553 443333 347888989999999887553 44433 45666
Q ss_pred hhcCc--cceEEe
Q 020692 92 PRLFV--ASFTLV 102 (322)
Q Consensus 92 ~~~~a--~~i~~v 102 (322)
++.|+ ++|+++
T Consensus 145 ~~~G~~~~~I~~v 157 (207)
T PF14681_consen 145 KEHGVPEENIIIV 157 (207)
T ss_dssp HHTTG-GGEEEEE
T ss_pred HHcCCCcceEEEE
Confidence 77765 566554
No 164
>cd01527 RHOD_YgaP Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YgaP, and similar uncharacterized putative rhodanese-related sulfurtransferases.
Probab=28.75 E-value=90 Score=23.58 Aligned_cols=32 Identities=19% Similarity=0.162 Sum_probs=24.8
Q ss_pred CCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEE
Q 020692 224 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSA 258 (322)
Q Consensus 224 ~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~ 258 (322)
+++.+++ +|.+|.....++..|++.|...++.
T Consensus 53 ~~~~iv~---~c~~g~~s~~~~~~L~~~g~~~v~~ 84 (99)
T cd01527 53 GANAIIF---HCRSGMRTQQNAERLAAISAGEAYV 84 (99)
T ss_pred CCCcEEE---EeCCCchHHHHHHHHHHcCCccEEE
Confidence 4566666 4788988889999999999886554
No 165
>cd05009 SIS_GlmS_GlmD_2 SIS (Sugar ISomerase) domain repeat 2 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=28.45 E-value=2.2e+02 Score=23.03 Aligned_cols=86 Identities=8% Similarity=-0.083 Sum_probs=50.6
Q ss_pred CCCcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCchhHHHHHHHHHHhh
Q 020692 13 QKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALP 92 (322)
Q Consensus 13 ~~~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~~~l~elll~~~a~~ 92 (322)
+-+.+.++..-.+...|...+.++ .+.+.+...-|.++| ..-.....+...+++|+-|.... .--++..++..++
T Consensus 12 ~~~~i~~~G~G~s~~~a~e~~~kl--~e~~~i~~~~~~~~e--~~hg~~~~~~~~~~vi~is~~g~-t~~~~~~~~~~~~ 86 (153)
T cd05009 12 EAKSFYVLGRGPNYGTALEGALKL--KETSYIHAEAYSAGE--FKHGPIALVDEGTPVIFLAPEDR-LEEKLESLIKEVK 86 (153)
T ss_pred ccCcEEEEcCCCCHHHHHHHHHHH--HHHHhhcceeccHHH--hccChhhhccCCCcEEEEecCCh-hHHHHHHHHHHHH
Confidence 345566655555777888888777 356666777777776 32232344555666666654332 1222445677888
Q ss_pred hcCccceEEeec
Q 020692 93 RLFVASFTLVLP 104 (322)
Q Consensus 93 ~~~a~~i~~viP 104 (322)
+.|+ ++.++..
T Consensus 87 ~~~~-~vi~it~ 97 (153)
T cd05009 87 ARGA-KVIVITD 97 (153)
T ss_pred HcCC-EEEEEec
Confidence 8776 4555544
No 166
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=28.29 E-value=1.1e+02 Score=28.61 Aligned_cols=35 Identities=23% Similarity=0.323 Sum_probs=30.6
Q ss_pred CCCCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEE
Q 020692 222 NPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYV 260 (322)
Q Consensus 222 ~v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~ 260 (322)
+++|++|+|+ -+|++-..++..|.+.|+++|+++.
T Consensus 122 ~~~~k~vlvl----GaGGaarai~~aL~~~G~~~i~I~n 156 (282)
T TIGR01809 122 PLAGFRGLVI----GAGGTSRAAVYALASLGVTDITVIN 156 (282)
T ss_pred ccCCceEEEE----cCcHHHHHHHHHHHHcCCCeEEEEe
Confidence 4688998876 6899999999999999999998875
No 167
>cd04820 PA_M28_1_1 PA_M28_1_1: Protease-associated (PA) domain, peptidase family M28, subfamily-1, subgroup 1. A subgroup of PA-domain containing proteins belonging to the peptidase family M28. Family M28 contains aminopeptidases and carboxypeptidases, and has co-catalytic zinc ions. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Proteins into which the PA domain is inserted include the following members of the peptidase family M28: i) prostate-specific membrane antigen (PSMA), ii) yeast aminopeptidase Y, and ii) human TfR (transferrin receptor)1 and human TfR2. The proteins listed above belong to other subgroups; relatively litt
Probab=27.37 E-value=1.3e+02 Score=25.33 Aligned_cols=57 Identities=19% Similarity=0.060 Sum_probs=36.1
Q ss_pred cCCCCCCeEEEEeccccCh--------HhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcc
Q 020692 220 EGNPAGCHVVIVDDLVQSG--------GTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLK 276 (322)
Q Consensus 220 ~~~v~g~~vlivDDii~TG--------~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s 276 (322)
..|++||-||+.....+.. ++...=.+.+.++||.-|.++.--.--....++++.++
T Consensus 45 ~iDVkGKIVlv~~g~p~~~~~~~~~~~~~~~~K~~~A~~~GA~aVIi~~d~~~~~~~~~~~~~~~ 109 (137)
T cd04820 45 GLDVKGKIVVVLSGGPAGIPSEEGAHAHSSNEKARYAAKAGAIGMITLTTPRSEKIRPWERSVNY 109 (137)
T ss_pred CCCCCCeEEEEEcCCCCccccccccccccHHHHHHHHHHCCCeEEEEEeCCcccccCCHHHHhhc
Confidence 3489999998887766421 24666677888999998888763111111135556554
No 168
>PF02702 KdpD: Osmosensitive K+ channel His kinase sensor domain; InterPro: IPR003852 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Signal transducing histidine kinases are the key elements in two-component signal transduction systems, which control complex processes such as the initiation of development in microorganisms [, ]. Examples of histidine kinases are EnvZ, which plays a central role in osmoregulation [], and CheA, which plays a central role in the chemotaxis system []. Histidine kinases usually have an N-terminal ligand-binding domain and a C-terminal kinase domain, but other domains may also be present. The kinase domain is responsible for the autophosphorylation of the histidine with ATP, the phosphotransfer from the kinase to an aspartate of the response regulator, and (with bifunctional enzymes) the phosphotransfer from aspartyl phosphate back to ADP or to water []. The kinase core has a unique fold, distinct from that of the Ser/Thr/Tyr kinase superfamily. HKs can be roughly divided into two classes: orthodox and hybrid kinases [, ]. Most orthodox HKs, typified by the Escherichia coli EnvZ protein, function as periplasmic membrane receptors and have a signal peptide and transmembrane segment(s) that separate the protein into a periplasmic N-terminal sensing domain and a highly conserved cytoplasmic C-terminal kinase core. Members of this family, however, have an integral membrane sensor domain. Not all orthodox kinases are membrane bound, e.g., the nitrogen regulatory kinase NtrB (GlnL) is a soluble cytoplasmic HK []. Hybrid kinases contain multiple phosphodonor and phosphoacceptor sites and use multi-step phospho-relay schemes instead of promoting a single phosphoryl transfer. In addition to the sensor domain and kinase core, they contain a CheY-like receiver domain and a His-containing phosphotransfer (HPt) domain. This entry represents the N-terminal domain found in KdpD sensor kinase proteins, which regulate the kdpFABC operon responsible for potassium transport []. The N-terminal domain forms part of the cytoplasmic region of the protein, which may be the sensor domain responsible for sensing turgor pressure [].; GO: 0000155 two-component sensor activity, 0004673 protein histidine kinase activity, 0000160 two-component signal transduction system (phosphorelay), 0016020 membrane; PDB: 2R8R_B.
Probab=27.34 E-value=1e+02 Score=27.98 Aligned_cols=121 Identities=15% Similarity=0.254 Sum_probs=51.6
Q ss_pred CCCceEeccCCchHHHHHHHhccCCce-----EecCceeeee-ccCCCC-CCeEEEEeccccChH------hHHHHHHHH
Q 020692 182 ANNIVIAFPDDGAWKRFHKMLDHFPTV-----REGDKRIVRI-KEGNPA-GCHVVIVDDLVQSGG------TLIECQKVL 248 (322)
Q Consensus 182 ~~~~vvV~Pd~Ga~~ra~~~a~~L~~~-----r~~~k~~~~~-~~~~v~-g~~vlivDDii~TG~------Tl~~~~~~L 248 (322)
..+.|+-.....+-+-...++..|+.+ ...+...... ++.-++ .-.+++||.+.-|.. .=..-++.|
T Consensus 33 G~DVViG~vethgR~et~~l~~gLe~iP~~~i~y~g~~~~E~DldaiL~R~P~vvLVDELAHtN~pgsr~~kR~qDVeeL 112 (211)
T PF02702_consen 33 GVDVVIGYVETHGRPETEALLEGLEVIPRKKIEYRGRTLEEMDLDAILARRPQVVLVDELAHTNAPGSRHKKRYQDVEEL 112 (211)
T ss_dssp T--EEEEE---TT-HHHHHHHCTS-B---EEEEETTEEEEE--HHHHHHH--SEEEES-TT-B--TT-SSSBHHHHHHHH
T ss_pred CCCEEEEEecCCCcHHHHHHHcCCCcCCCeeEeeCCEecccCCHHHHHhcCCCEEEeCcccccCCCCCCCcccHHhHHHH
Confidence 334343334445666677777777651 1112111111 111122 226999999998854 233456777
Q ss_pred HHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCchhhhccCCCeEEEechHH
Q 020692 249 AAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLTVKAIANKAPFEVLSLAGS 315 (322)
Q Consensus 249 ~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~~~~~~~~~k~~~~~va~~ 315 (322)
.++| |.+++|--+.--+.+.-+-+. |..+-+..|||... +..-+.++.+|+.|-
T Consensus 113 L~aG---IdV~TTlNvqHlESlnd~V~~--------iTgv~vrEtVPD~~--l~~Adev~lVDi~Pe 166 (211)
T PF02702_consen 113 LDAG---IDVYTTLNVQHLESLNDVVEQ--------ITGVRVRETVPDSV--LDRADEVELVDITPE 166 (211)
T ss_dssp HHTT----EEEEEEEGGGBGGGHHHHHH--------HHS----S-B-HHH--HHT-SCEEEB---HH
T ss_pred HHCC---CeEEEeeeHHHhhhhHHHHHH--------HhCCeeeeeCCHHH--HhhcCeEEEecCCHH
Confidence 8889 666666444221222222222 56677889999864 345678999999885
No 169
>PF04015 DUF362: Domain of unknown function (DUF362) ; InterPro: IPR007160 This domain is found in some iron-sulphur proteins.
Probab=26.74 E-value=1.8e+02 Score=25.43 Aligned_cols=83 Identities=12% Similarity=0.093 Sum_probs=49.5
Q ss_pred cccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcC----EEEEecCCcCchhhhccCCCeEE
Q 020692 234 LVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFA----NFWITDSCPLTVKAIANKAPFEV 309 (322)
Q Consensus 234 ii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~----~iv~Tdti~~~~~~~~~~~k~~~ 309 (322)
.+|.=..+.++++.|+++|+++|.++..-+....+..+.++.+|. ++..+ +++..|.-+...........+..
T Consensus 18 ~~T~P~vv~avv~~l~~~g~~~i~i~e~~~~~~~~~~~~~~~~G~---~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~ 94 (206)
T PF04015_consen 18 ATTHPEVVRAVVEMLKEAGAKEIIIAESPGSGAADTREVFKRSGY---EEIAEEYGAELVDLDDEPWVEVPLPGGEHLKE 94 (206)
T ss_pred ccCCHHHHHHHHHHHHHcCCCceEEEeCCCcchHhHHHHHHHcch---hhHHHhcCCcEEEccCCcccceeccCCeeeee
Confidence 444556778899999999998888776433221244455555432 22122 66777776653321112345678
Q ss_pred EechHHHHHh
Q 020692 310 LSLAGSIADA 319 (322)
Q Consensus 310 ~~va~~la~~ 319 (322)
+.++..++|+
T Consensus 95 ~~v~~~~~ea 104 (206)
T PF04015_consen 95 FKVPRILLEA 104 (206)
T ss_pred EEhhHHHHhC
Confidence 8888888774
No 170
>COG0784 CheY FOG: CheY-like receiver [Signal transduction mechanisms]
Probab=26.68 E-value=1.9e+02 Score=22.20 Aligned_cols=45 Identities=20% Similarity=0.179 Sum_probs=26.6
Q ss_pred CCCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCc--chHHHHhcc
Q 020692 223 PAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPK--GSWERFTLK 276 (322)
Q Consensus 223 v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~--~a~~~l~~s 276 (322)
..+.++++||| .........+.|...| +.++..-++ .+.+.+.+.
T Consensus 3 ~~~~~vLivdD---~~~~~~~~~~~l~~~g------~~v~~a~~g~~~al~~~~~~ 49 (130)
T COG0784 3 LSGLRVLVVDD---EPVNRRLLKRLLEDLG------YEVVEAADGEEEALELLREL 49 (130)
T ss_pred CCCcEEEEEcC---CHHHHHHHHHHHHHcC------CeEEEeCChHHHHHHHHHhC
Confidence 35679999999 3334444556777777 122223333 567777664
No 171
>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily. Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.
Probab=26.62 E-value=1.3e+02 Score=22.39 Aligned_cols=31 Identities=16% Similarity=0.196 Sum_probs=23.5
Q ss_pred CCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEE
Q 020692 225 GCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAY 259 (322)
Q Consensus 225 g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~ 259 (322)
+++++++. ++|.....++..|++.|. ++..+
T Consensus 51 ~~~vvl~c---~~g~~a~~~a~~L~~~G~-~v~~l 81 (90)
T cd01524 51 DKEIIVYC---AVGLRGYIAARILTQNGF-KVKNL 81 (90)
T ss_pred CCcEEEEc---CCChhHHHHHHHHHHCCC-CEEEe
Confidence 56788874 468888889999999998 65443
No 172
>PRK13810 orotate phosphoribosyltransferase; Provisional
Probab=26.36 E-value=4.1e+02 Score=23.37 Aligned_cols=76 Identities=13% Similarity=0.129 Sum_probs=46.1
Q ss_pred CHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCc-hhHHHHHHHHHHhhhcCccceEEee
Q 020692 25 CEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSP-GVIFEQISVIYALPRLFVASFTLVL 103 (322)
Q Consensus 25 ~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~-~~l~elll~~~a~~~~~a~~i~~vi 103 (322)
.-+||..+|..+| +++.-+.-..=.-|+..... ..-.+|+.|+||...-.. ..+.+ .++.++++|+ .+..+.
T Consensus 84 GiplA~~vA~~l~-~p~v~vRK~~k~~g~~~~~~--g~~~~g~rVlIVDDVitTGgS~~~---~i~~l~~~Ga-~V~~v~ 156 (187)
T PRK13810 84 GVPLATAVSLETG-LPLLIVRKSVKDYGTGSRFV--GDLKPEDRIVMLEDVTTSGGSVRE---AIEVVREAGA-YIKYVI 156 (187)
T ss_pred hHHHHHHHHHHhC-CCEEEEecCCCccCCCceEE--ccCCCcCEEEEEEeccCCChHHHH---HHHHHHHCCC-EEEEEE
Confidence 5589999999996 88765433222224423322 122478999999887554 45555 4667777786 354444
Q ss_pred ccCC
Q 020692 104 PFFP 107 (322)
Q Consensus 104 PY~~ 107 (322)
-.+-
T Consensus 157 vlvd 160 (187)
T PRK13810 157 TVVD 160 (187)
T ss_pred EEEE
Confidence 4443
No 173
>cd04814 PA_M28_1 PA_M28_1: Protease-associated (PA) domain, peptidase family M28, subfamily-1. A subfamily of PA-domain containing proteins belonging to the peptidase family M28. Family M28 contains aminopeptidases and carboxypeptidases, and has co-catalytic zinc ions. The PA domain is an insert domain in a diverse fraction of proteases. The significance of the PA domain to many of the proteins in which it is inserted is undetermined. It may be a protein-protein interaction domain. At peptidase active sites, the PA domain may participate in substrate binding and/or promoting conformational changes, which influence the stability and accessibility of the site to substrate. Proteins into which the PA domain is inserted include the following members of the peptidase family M28: i) prostate-specific membrane antigen (PSMA), ii) yeast aminopeptidase Y, and ii) human TfR (transferrin receptor)1 and human TfR2. The proteins listed above belong to other subfamilies, relatively little is known a
Probab=26.10 E-value=1.5e+02 Score=25.08 Aligned_cols=41 Identities=29% Similarity=0.190 Sum_probs=29.9
Q ss_pred CCCCCCeEEEEecccc-------ChH-------hHHHHHHHHHHcCCCeEEEEEE
Q 020692 221 GNPAGCHVVIVDDLVQ-------SGG-------TLIECQKVLAAHGAAKVSAYVT 261 (322)
Q Consensus 221 ~~v~g~~vlivDDii~-------TG~-------Tl~~~~~~L~~~Ga~~v~~~~t 261 (322)
-|++||-|++..+-.. +|+ ++..=.+..+++||.-|.++..
T Consensus 44 ~DVkGKIVlv~~g~P~~~~~~~~~~~~~~~~~~~~~~K~~~A~~~GA~gvIii~~ 98 (142)
T cd04814 44 LDVKGKVVVVLRNDPQGEPGAGDFGGKAMTYYGRWTYKYEEAARHGAAGVLIVHE 98 (142)
T ss_pred CCCCCcEEEEEcCCCCcccccccccccccccccCHHHHHHHHHHCCCcEEEEEeC
Confidence 4799999988866541 112 5666777888999998888764
No 174
>PLN02962 hydroxyacylglutathione hydrolase
Probab=26.09 E-value=97 Score=28.66 Aligned_cols=50 Identities=12% Similarity=0.009 Sum_probs=33.4
Q ss_pred CCCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCc-chHHHHhc
Q 020692 223 PAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPK-GSWERFTL 275 (322)
Q Consensus 223 v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~-~a~~~l~~ 275 (322)
..++.++|||..- .......+.+++.|.+-..+++||+=+.- ++...|.+
T Consensus 33 ~~~~~avlIDP~~---~~~~~~l~~l~~~g~~i~~Il~TH~H~DHigg~~~l~~ 83 (251)
T PLN02962 33 HPDKPALLIDPVD---KTVDRDLSLVKELGLKLIYAMNTHVHADHVTGTGLLKT 83 (251)
T ss_pred CCCCEEEEECCCC---CcHHHHHHHHHHCCCeeEEEEcCCCCchhHHHHHHHHH
Confidence 3467899999632 23344567888889888899999996553 33444543
No 175
>PRK10997 yieM hypothetical protein; Provisional
Probab=25.97 E-value=2.8e+02 Score=28.49 Aligned_cols=60 Identities=18% Similarity=0.279 Sum_probs=43.1
Q ss_pred CCCCCeEEEEeccccCh--HhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecC
Q 020692 222 NPAGCHVVIVDDLVQSG--GTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDS 293 (322)
Q Consensus 222 ~v~g~~vlivDDii~TG--~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdt 293 (322)
..++-.++||-|.++.+ ..+.+.++.|++.+..++++++.= -...+.+.++ +|++|.=||
T Consensus 414 ~~r~adIVVISDF~~~~~~eel~~~L~~Lk~~~~~rf~~l~i~-~~~~p~l~~i-----------fD~~W~~d~ 475 (487)
T PRK10997 414 EWFDADAVVISDFIAQRLPDELVAKVKELQRQHQHRFHAVAMS-AHGKPGIMRI-----------FDHIWRFDT 475 (487)
T ss_pred ccCCceEEEECCCCCCCChHHHHHHHHHHHHhcCcEEEEEEeC-CCCCchHHHh-----------cCeeeEecC
Confidence 35567899999999865 568889999999888999998852 1223333222 689997665
No 176
>PRK08105 flavodoxin; Provisional
Probab=25.31 E-value=2.4e+02 Score=23.63 Aligned_cols=64 Identities=13% Similarity=0.049 Sum_probs=34.6
Q ss_pred cEEEEecCC---CHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecC----CchhHHHHHH
Q 020692 16 QVHLFYCVE---CEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFS----SPGVIFEQIS 86 (322)
Q Consensus 16 ~~~i~~g~~---~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~----~~~~l~elll 86 (322)
++.||.||. .+.+|++|++.|. -.-.++.+...+|-+ . .+......++++.|+. +|++..+.+.
T Consensus 3 ~i~I~YgS~tGnte~~A~~l~~~l~-~~g~~~~~~~~~~~~-----~-~~~~~~~~vi~~~sT~G~Ge~p~~~~~f~~ 73 (149)
T PRK08105 3 KVGIFVGTVYGNALLVAEEAEAILT-AQGHEVTLFEDPELS-----D-WQPYQDELVLVVTSTTGQGDLPDSIVPLFQ 73 (149)
T ss_pred eEEEEEEcCchHHHHHHHHHHHHHH-hCCCceEEechhhCC-----c-hhcccCCeEEEEECCCCCCCCChhHHHHHH
Confidence 577888776 4578999988873 211222222222211 1 0112235677888886 3577655543
No 177
>PLN02160 thiosulfate sulfurtransferase
Probab=25.29 E-value=1.2e+02 Score=25.11 Aligned_cols=44 Identities=20% Similarity=0.262 Sum_probs=33.5
Q ss_pred CCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhccc
Q 020692 224 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKN 277 (322)
Q Consensus 224 ~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~ 277 (322)
++++++++ |.+|..-..++..|++.|...|+.+. +++....+.|
T Consensus 80 ~~~~Iivy---C~sG~RS~~Aa~~L~~~G~~~v~~l~-------GG~~~W~~~g 123 (136)
T PLN02160 80 PADDILVG---CQSGARSLKATTELVAAGYKKVRNKG-------GGYLAWVDHS 123 (136)
T ss_pred CCCcEEEE---CCCcHHHHHHHHHHHHcCCCCeeecC-------CcHHHHhhCC
Confidence 45677776 68999999999999999998876532 4566677665
No 178
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=24.92 E-value=2e+02 Score=22.51 Aligned_cols=84 Identities=15% Similarity=0.058 Sum_probs=48.8
Q ss_pred CCCcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCchhHHHHHHHHHHhh
Q 020692 13 QKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALP 92 (322)
Q Consensus 13 ~~~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~~~l~elll~~~a~~ 92 (322)
+.+.+.++....+..+|...+..|. .+++ ....+++.+... .....+...|++|+-|..... .+++.+++.++
T Consensus 12 ~~~~i~i~g~g~s~~~a~~~~~~l~--~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~i~iS~~g~~--~~~~~~~~~a~ 84 (139)
T cd05013 12 KARRIYIFGVGSSGLVAEYLAYKLL--RLGK-PVVLLSDPHLQL--MSAANLTPGDVVIAISFSGET--KETVEAAEIAK 84 (139)
T ss_pred hCCEEEEEEcCchHHHHHHHHHHHH--HcCC-ceEEecCHHHHH--HHHHcCCCCCEEEEEeCCCCC--HHHHHHHHHHH
Confidence 3456777776667888998888883 3443 344455554211 111223346787877765432 24455567888
Q ss_pred hcCccceEEeec
Q 020692 93 RLFVASFTLVLP 104 (322)
Q Consensus 93 ~~~a~~i~~viP 104 (322)
+.|++ +.++..
T Consensus 85 ~~g~~-iv~iT~ 95 (139)
T cd05013 85 ERGAK-VIAITD 95 (139)
T ss_pred HcCCe-EEEEcC
Confidence 88864 555544
No 179
>PRK14093 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase; Provisional
Probab=24.91 E-value=6.6e+02 Score=25.20 Aligned_cols=106 Identities=9% Similarity=0.012 Sum_probs=56.4
Q ss_pred HHHHHHHHcCCcceeeee--EeeeC--CCce-eEEeccCCCCCCCeEEEEEe--cCCchhHHHHHHHHHHhhhcCccceE
Q 020692 28 LARKVAAQSDLITLQSIN--WRNFA--DGWP-NLYINSAHDIRGQHVAFLAS--FSSPGVIFEQISVIYALPRLFVASFT 100 (322)
Q Consensus 28 la~~ia~~lg~~~~~~~~--~~~Fp--dGE~-~v~v~~~~~v~g~dv~iv~s--~~~~~~l~elll~~~a~~~~~a~~i~ 100 (322)
.|-.+|..+| +++..+. +.+|. .|-- ..+.. ..+..+.+|.. -++|+.+-..|-.+.........+++
T Consensus 298 aAia~a~~lG-i~~~~i~~~l~~~~~~~gR~~~~r~~----~~~~~~~iIDDsYahnP~s~~aaL~~l~~~~~~~~~r~i 372 (479)
T PRK14093 298 AVLAAAELAG-ADLALAALALSQVQPAAGRGVRHTLE----VGGGEATLIDESYNANPASMAAALGVLGRAPVGPQGRRI 372 (479)
T ss_pred HHHHHHHHcC-CCHHHHHHHHHhCCCcCCcceEEEee----cCCCCEEEEECCCCCCHHHHHHHHHHHHhhhccCCCCEE
Confidence 3556677786 7776554 56663 4421 12222 11233566664 34577776666555443211123555
Q ss_pred EeeccC--CCCccchhccCCCcccHHHHHHHHhcCCCCCCCCcEEEEecCChh
Q 020692 101 LVLPFF--PTGSFERMEEEGDVATAFTMARILSNIPTSRGGPTSLVIYDIHAL 151 (322)
Q Consensus 101 ~viPY~--~YsRqdr~~~~ge~~sak~~a~lL~~~~~~~~g~d~Ii~VdlHs~ 151 (322)
+|+.=+ -|+|....+ +.+++.+.. .++|.|+.+..++.
T Consensus 373 ~V~G~m~elg~~~~~~h--------~~~~~~~~~-----~~~d~v~~~G~~~~ 412 (479)
T PRK14093 373 AVLGDMLELGPRGPELH--------RGLAEAIRA-----NAIDLVFCCGPLMR 412 (479)
T ss_pred EEECChHHcCcHHHHHH--------HHHHHHHHH-----cCCCEEEEEchhHH
Confidence 555432 344433322 357777764 26799999987653
No 180
>PF08410 DUF1737: Domain of unknown function (DUF1737); InterPro: IPR013619 This domain of unknown function is found at the N terminus of bacterial and viral hypothetical proteins.
Probab=24.88 E-value=1.7e+02 Score=20.74 Aligned_cols=36 Identities=8% Similarity=0.039 Sum_probs=26.3
Q ss_pred cEEEEecCCCHHHHHHHHHHcC-CcceeeeeEeeeCC
Q 020692 16 QVHLFYCVECEELARKVAAQSD-LITLQSINWRNFAD 51 (322)
Q Consensus 16 ~~~i~~g~~~~~la~~ia~~lg-~~~~~~~~~~~Fpd 51 (322)
...++++++...|+++|.++|. +..+..--.-.|+.
T Consensus 5 ~Yr~lt~~d~~~fc~rVt~aL~~GW~l~GsP~~t~~~ 41 (54)
T PF08410_consen 5 HYRVLTGPDDSAFCHRVTEALNEGWQLYGSPTYTFDG 41 (54)
T ss_pred eeEEEECCChHHHHHHHHHHHHcCCEecCCceEEECC
Confidence 4789999999999999999883 14554444455554
No 181
>cd01525 RHOD_Kc Member of the Rhodanese Homology Domain superfamily. Included in this CD are the rhodanese-like domains found C-terminal of the serine/threonine protein kinases catalytic (S_TKc) domain and the Tre-2, BUB2p, Cdc16p (TBC) domain. The putative active site Cys residue is not present in this CD.
Probab=24.80 E-value=1.4e+02 Score=22.59 Aligned_cols=33 Identities=24% Similarity=0.253 Sum_probs=25.3
Q ss_pred CCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEE
Q 020692 224 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAY 259 (322)
Q Consensus 224 ~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~ 259 (322)
+++.+++++ .+|.+...++..|+..|...|+.+
T Consensus 64 ~~~~vv~~c---~~g~~s~~~a~~L~~~G~~~v~~l 96 (105)
T cd01525 64 KGKIIVIVS---HSHKHAALFAAFLVKCGVPRVCIL 96 (105)
T ss_pred cCCeEEEEe---CCCccHHHHHHHHHHcCCCCEEEE
Confidence 366778865 567777788889999999888743
No 182
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=24.65 E-value=1.4e+02 Score=23.03 Aligned_cols=32 Identities=19% Similarity=0.169 Sum_probs=25.0
Q ss_pred CCCeEEEEeccccChHhHHHHHHHHHHcCCCe-EEE
Q 020692 224 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAK-VSA 258 (322)
Q Consensus 224 ~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~-v~~ 258 (322)
+++.++++ |.+|..-..++..|++.|... |+.
T Consensus 65 ~~~~ivv~---C~~G~rs~~a~~~L~~~G~~~~v~~ 97 (109)
T cd01533 65 PRTPIVVN---CAGRTRSIIGAQSLINAGLPNPVAA 97 (109)
T ss_pred CCCeEEEE---CCCCchHHHHHHHHHHCCCCcceeE
Confidence 56778888 678887777899999999876 543
No 183
>cd01447 Polysulfide_ST Polysulfide-sulfurtransferase - Rhodanese Homology Domain. This domain is believed to serve as a polysulfide binding and transferase domain in anaerobic gram-negative bacteria, functioning in oxidative phosphorylation with polysulfide-sulfur as a terminal electron acceptor. The active site contains the same conserved cysteine that is the catalytic residue in other Rhodanese Homology Domain proteins.
Probab=24.33 E-value=93 Score=23.45 Aligned_cols=32 Identities=22% Similarity=0.061 Sum_probs=25.3
Q ss_pred CCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEE
Q 020692 224 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSA 258 (322)
Q Consensus 224 ~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~ 258 (322)
+++.+++.+ .+|.....++..|++.|...|+.
T Consensus 60 ~~~~ivv~c---~~g~~s~~~~~~l~~~G~~~v~~ 91 (103)
T cd01447 60 EDKPFVFYC---ASGWRSALAGKTLQDMGLKPVYN 91 (103)
T ss_pred CCCeEEEEc---CCCCcHHHHHHHHHHcChHHhEe
Confidence 567888886 46777788899999999887764
No 184
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=24.09 E-value=1e+02 Score=25.17 Aligned_cols=57 Identities=19% Similarity=0.278 Sum_probs=36.0
Q ss_pred HhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCc
Q 020692 239 GTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLT 297 (322)
Q Consensus 239 ~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~ 297 (322)
-|+.++.+.|.++|.++|.+.-+| ++.+.-.+.|.+.- +.+.....+|.+++.+-.+
T Consensus 56 p~~~eaL~~l~~~G~~~V~V~Pl~-l~~G~e~~di~~~v-~~~~~~~~~i~~g~pLl~~ 112 (127)
T cd03412 56 DTPEEALAKLAADGYTEVIVQSLH-IIPGEEYEKLKREV-DAFKKGFKKIKLGRPLLYS 112 (127)
T ss_pred CCHHHHHHHHHHCCCCEEEEEeCe-eECcHHHHHHHHHH-HHHhCCCceEEEccCCCCC
Confidence 578899999999999999999887 55554344444320 0000014577777765543
No 185
>PRK09271 flavodoxin; Provisional
Probab=23.87 E-value=4.4e+02 Score=22.12 Aligned_cols=54 Identities=15% Similarity=0.221 Sum_probs=29.2
Q ss_pred EEEEecCC---CHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEe
Q 020692 17 VHLFYCVE---CEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLAS 74 (322)
Q Consensus 17 ~~i~~g~~---~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s 74 (322)
+.|+.+|. .+.+|+.|++.|. ..-..+.+...++.+.. .+..++...+++++.+
T Consensus 3 v~IvY~S~tGnTe~~A~~ia~~l~-~~g~~v~~~~~~~~~~~---~~~~~~~~~d~vilgt 59 (160)
T PRK09271 3 ILLAYASLSGNTREVAREIEERCE-EAGHEVDWVETDVQTLA---EYPLDPEDYDLYLLGT 59 (160)
T ss_pred EEEEEEcCCchHHHHHHHHHHHHH-hCCCeeEEEeccccccc---ccccCcccCCEEEEEC
Confidence 34444443 3578999999884 33334455555444211 1123444567777777
No 186
>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE. Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.
Probab=23.87 E-value=1.6e+02 Score=23.00 Aligned_cols=32 Identities=13% Similarity=0.118 Sum_probs=25.6
Q ss_pred CCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEE
Q 020692 224 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSA 258 (322)
Q Consensus 224 ~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~ 258 (322)
+++.++++ |.+|.....++..|++.|...++.
T Consensus 57 ~~~~vvly---C~~G~rS~~aa~~L~~~G~~~v~~ 88 (101)
T TIGR02981 57 KNDTVKLY---CNAGRQSGMAKDILLDMGYTHAEN 88 (101)
T ss_pred CCCeEEEE---eCCCHHHHHHHHHHHHcCCCeEEe
Confidence 45567676 678988889999999999988764
No 187
>PRK08558 adenine phosphoribosyltransferase; Provisional
Probab=23.71 E-value=5.7e+02 Score=23.37 Aligned_cols=80 Identities=15% Similarity=0.091 Sum_probs=47.6
Q ss_pred CcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeC-------------CCc-eeEEeccCCCCCCCeEEEEEecCCch-
Q 020692 15 KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFA-------------DGW-PNLYINSAHDIRGQHVAFLASFSSPG- 79 (322)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~Fp-------------dGE-~~v~v~~~~~v~g~dv~iv~s~~~~~- 79 (322)
-+..+-.....-.+|..+|.+|| .++.-+.-.+.+ .|. ..+++.-..-.+|+.|+||..+-...
T Consensus 112 ~D~Vvtv~~~GI~lA~~lA~~L~-~p~vi~Rk~~~~~~~~~v~~y~s~s~~~~~~~~l~~~~l~~G~rVLIVDDvi~TG~ 190 (238)
T PRK08558 112 VDVVLTAATDGIPLAVAIASYFG-ADLVYAKKSKETGVEKFYEEYQRLASGIEVTLYLPASALKKGDRVLIVDDIIRSGE 190 (238)
T ss_pred CCEEEEECcccHHHHHHHHHHHC-cCEEEEEecCCCCCcceEEEeeccCCCceeEEEecHHHcCCcCEEEEEecccccCH
Confidence 35555555667899999999996 887654332211 111 01112111225789999998876543
Q ss_pred hHHHHHHHHHHhhhcCccc
Q 020692 80 VIFEQISVIYALPRLFVAS 98 (322)
Q Consensus 80 ~l~elll~~~a~~~~~a~~ 98 (322)
.+. -+++.+++.|++-
T Consensus 191 Tl~---~~~~ll~~~ga~v 206 (238)
T PRK08558 191 TQR---ALLDLARQAGADV 206 (238)
T ss_pred HHH---HHHHHHHHcCCEE
Confidence 332 3567778888753
No 188
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=23.46 E-value=52 Score=30.25 Aligned_cols=92 Identities=17% Similarity=0.144 Sum_probs=55.1
Q ss_pred CcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCc-----------eeEEe---ccCCCCCCCeEEEEEecCC---
Q 020692 15 KQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGW-----------PNLYI---NSAHDIRGQHVAFLASFSS--- 77 (322)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE-----------~~v~v---~~~~~v~g~dv~iv~s~~~--- 77 (322)
..+-++.-++|..+-.+..+.+. -+=..+...|+|-+. ..+.- .+..+ .+-||+....++.
T Consensus 8 ~riGlIvpssn~t~E~e~~~~~~-p~~v~~h~sRi~~~~~vt~e~L~~m~~~l~~aa~~ll~~-a~~dvi~~~cTsgs~~ 85 (239)
T TIGR02990 8 KRIGLVILATDHTSERDFARMVA-SDRIGVYVNRIPYANPTTPENLRKMQPRLTEAAALILPD-EELDVVAYSCTSASVV 85 (239)
T ss_pred ceEEEEECCCCCchHHHHHHHhC-cCCeEEEEeceeCCCCCCHHHHHHHhhhHHHHHHHhcCC-CCCCEEEEccchhhee
Confidence 44667777888888888887763 233556666775331 00000 11111 1356777666543
Q ss_pred --chhHHHHH--------------HHHHHhhhcCccceEEeeccCCC
Q 020692 78 --PGVIFEQI--------------SVIYALPRLFVASFTLVLPFFPT 108 (322)
Q Consensus 78 --~~~l~ell--------------l~~~a~~~~~a~~i~~viPY~~Y 108 (322)
++.+.+.+ -++++|+..|++||.++.||.+.
T Consensus 86 ~G~~~~~~~i~~~~~g~p~tt~~~A~~~AL~alg~~RIalvTPY~~~ 132 (239)
T TIGR02990 86 IGDDEVTRAINAAKPGTPVVTPSSAAVDGLAALGVRRISLLTPYTPE 132 (239)
T ss_pred cCHHHHHHHHHhcCCCCCeeCHHHHHHHHHHHcCCCEEEEECCCcHH
Confidence 23333333 35778888999999999999865
No 189
>PRK15482 transcriptional regulator MurR; Provisional
Probab=23.27 E-value=1.6e+02 Score=27.33 Aligned_cols=83 Identities=10% Similarity=0.001 Sum_probs=50.4
Q ss_pred CCCcEEEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCchhHHHHHHHHHHhh
Q 020692 13 QKKQVHLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALP 92 (322)
Q Consensus 13 ~~~~~~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~~~l~elll~~~a~~ 92 (322)
+.+.+.++...++..+|..++..|. .++. .+.-++|+. ........+...||+|+-|.+.. --|++.+++.++
T Consensus 134 ~A~~I~i~G~G~S~~~A~~l~~~l~--~~g~-~~~~~~d~~--~~~~~~~~~~~~Dv~i~iS~sg~--t~~~~~~~~~a~ 206 (285)
T PRK15482 134 KAPFIQITGLGGSALVGRDLSFKLM--KIGY-RVACEADTH--VQATVSQALKKGDVQIAISYSGS--KKEIVLCAEAAR 206 (285)
T ss_pred hCCeeEEEEeChhHHHHHHHHHHHH--hCCC-eeEEeccHh--HHHHHHhcCCCCCEEEEEeCCCC--CHHHHHHHHHHH
Confidence 4466888887778888999988873 2332 223345543 11111234556789998887543 224455677788
Q ss_pred hcCccceEEee
Q 020692 93 RLFVASFTLVL 103 (322)
Q Consensus 93 ~~~a~~i~~vi 103 (322)
+.|++ +.++.
T Consensus 207 ~~g~~-iI~IT 216 (285)
T PRK15482 207 KQGAT-VIAIT 216 (285)
T ss_pred HCCCE-EEEEe
Confidence 88875 55554
No 190
>PRK08564 5'-methylthioadenosine phosphorylase II; Reviewed
Probab=22.81 E-value=77 Score=29.71 Aligned_cols=99 Identities=18% Similarity=0.138 Sum_probs=55.1
Q ss_pred ccCCCcEEEEecCCC---HHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEE--Eec---CCchhHH
Q 020692 11 KSQKKQVHLFYCVEC---EELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFL--ASF---SSPGVIF 82 (322)
Q Consensus 11 ~~~~~~~~i~~g~~~---~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv--~s~---~~~~~l~ 82 (322)
+|.+..+.|+.||+- ..|++.+-... .+++++ |.|+ +.+ ..+.|++|+++ |.- ++|-.+
T Consensus 4 ~~~~~~igiIgGSGl~~~~~l~~~~~~~~-~tpyg~------p~~~--l~~---g~l~g~~v~~l~RhGr~H~y~~~~i- 70 (267)
T PRK08564 4 PNEKASIGIIGGSGLYDPGIFENSKEVKV-YTPYGE------PSDN--III---GEIEGVEVAFLPRHGRGHRIPPHKI- 70 (267)
T ss_pred CCCCceEEEEecCCCCCCcccccceeeeE-EcCCCC------CccC--EEE---EEECCEEEEEEeCCCCCcccCCccC-
Confidence 466678999999885 34544433333 133332 4454 333 34668899998 443 233222
Q ss_pred HHHHHHHHhhhcCccceEEeeccCCCCccchhccCCCcccHHH
Q 020692 83 EQISVIYALPRLFVASFTLVLPFFPTGSFERMEEEGDVATAFT 125 (322)
Q Consensus 83 elll~~~a~~~~~a~~i~~viPY~~YsRqdr~~~~ge~~sak~ 125 (322)
..-.-+.+++.+|++.+.++--= +-.+.+ +++|+.+-...
T Consensus 71 ~~~a~i~aLk~LGvk~iI~tnav-Gsl~~~--~~pGDlVv~~D 110 (267)
T PRK08564 71 NYRANIWALKELGVEWVIAVSAV-GSLRED--YKPGDFVIPDQ 110 (267)
T ss_pred cchHHHHHHHHCCCcEEEEeccc-cccCCC--CCCCCEEeehh
Confidence 23456788999999877654321 112222 45676654433
No 191
>COG2065 PyrR Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=22.71 E-value=2.3e+02 Score=24.94 Aligned_cols=69 Identities=14% Similarity=0.173 Sum_probs=44.0
Q ss_pred hhhhccCCCcEEEEecCC-CHHHHHHHHHHcCC-----cceeeeeEeeeCCCceeEE-----e---ccCCCCCCCeEEEE
Q 020692 7 IKAKKSQKKQVHLFYCVE-CEELARKVAAQSDL-----ITLQSINWRNFADGWPNLY-----I---NSAHDIRGQHVAFL 72 (322)
Q Consensus 7 ~~~~~~~~~~~~i~~g~~-~~~la~~ia~~lg~-----~~~~~~~~~~FpdGE~~v~-----v---~~~~~v~g~dv~iv 72 (322)
+-.++..-.++.++.-.+ .-+||++|++.++. ++++.+.+.-|-|-=.... + .++.++.|+.|++|
T Consensus 23 IiErnk~~~~~vlvGIktrGv~lA~rl~~~i~~~Eg~~vp~g~lDIt~yRDDl~~~~~~~p~~~~t~~~~di~~k~VILV 102 (179)
T COG2065 23 IIERNKGLDNLVLVGIKTRGVPLAERLAERIEELEGIEVPVGELDITLYRDDLTQKGPLRPQAKTTILPFDITGKRVILV 102 (179)
T ss_pred HHHHhCCCCceEEEeEecCCHHHHHHHHHHHHHHhCCCCCeeeEEeEEeechhhhcCccCCcccCccCcccccCCEEEEE
Confidence 334444446777766555 66999999998863 3578888888877521111 0 13456778888887
Q ss_pred Eec
Q 020692 73 ASF 75 (322)
Q Consensus 73 ~s~ 75 (322)
...
T Consensus 103 DDV 105 (179)
T COG2065 103 DDV 105 (179)
T ss_pred eee
Confidence 653
No 192
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=22.46 E-value=94 Score=23.83 Aligned_cols=47 Identities=17% Similarity=0.092 Sum_probs=25.7
Q ss_pred cccChHhHHHHHHHHHHcCCCeEEEEEEeccC-Ccc----hHHHHhcccCCCccCCcCEEEEe
Q 020692 234 LVQSGGTLIECQKVLAAHGAAKVSAYVTHGVF-PKG----SWERFTLKNGENMENAFANFWIT 291 (322)
Q Consensus 234 ii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~-~~~----a~~~l~~s~~~g~~~~~~~iv~T 291 (322)
+++|++|- +.|++.|.....+.-..+-- ..+ ..+.|.+-. |+-||+|
T Consensus 16 i~AT~gTa----~~L~~~Gi~~~~v~~~~~~~~~~~g~~~i~~~i~~~~-------IdlVIn~ 67 (95)
T PF02142_consen 16 IYATEGTA----KFLKEHGIEVTEVVNKIGEGESPDGRVQIMDLIKNGK-------IDLVINT 67 (95)
T ss_dssp EEEEHHHH----HHHHHTT--EEECCEEHSTG-GGTHCHHHHHHHHTTS-------EEEEEEE
T ss_pred EEEChHHH----HHHHHcCCCceeeeeecccCccCCchhHHHHHHHcCC-------eEEEEEe
Confidence 56788874 67788897744443322221 123 666666654 7866654
No 193
>PRK04537 ATP-dependent RNA helicase RhlB; Provisional
Probab=22.44 E-value=1.6e+02 Score=30.60 Aligned_cols=65 Identities=17% Similarity=0.218 Sum_probs=44.6
Q ss_pred CCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcCc
Q 020692 224 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPLT 297 (322)
Q Consensus 224 ~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~~ 297 (322)
.++.+||+ +.|=.+...+++.|.+.| +.+.+.|+-++....+++.+..-+|- +.-+|+||.+...
T Consensus 256 ~~~k~LVF---~nt~~~ae~l~~~L~~~g---~~v~~lhg~l~~~eR~~il~~Fr~G~---~~VLVaTdv~arG 320 (572)
T PRK04537 256 EGARTMVF---VNTKAFVERVARTLERHG---YRVGVLSGDVPQKKRESLLNRFQKGQ---LEILVATDVAARG 320 (572)
T ss_pred cCCcEEEE---eCCHHHHHHHHHHHHHcC---CCEEEEeCCCCHHHHHHHHHHHHcCC---CeEEEEehhhhcC
Confidence 46667776 566677888888998887 45778899888755444444322222 7789999987643
No 194
>TIGR01573 cas2 CRISPR-associated endoribonuclease Cas2. This model describes most members of the family of Cas2, one of the first four protein families found to mark prokaryotic genomes that contain multiple CRISPR elements. It is an endoribonuclease, capable of cleaving single-stranded RNA. CRISPR is an acronym for Clustered Regularly Interspaced Short Palindromic Repeats. The cas genes are found near the repeats. A distinct branch of the Cas2 family shows a very low level of sequence identity and is modeled by TIGR01873 instead.
Probab=22.10 E-value=1.2e+02 Score=23.58 Aligned_cols=50 Identities=20% Similarity=0.301 Sum_probs=36.3
Q ss_pred eEEEEeccccCh--HhHHHHHHHHHHcCCCeEEEEEEeccCCcchHH-HHhcc
Q 020692 227 HVVIVDDLVQSG--GTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWE-RFTLK 276 (322)
Q Consensus 227 ~vlivDDii~TG--~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~-~l~~s 276 (322)
.++|+=||-+.+ ....+.++.|++.|...+.--+..+..++.... ++.+.
T Consensus 2 ~~lV~YDI~~~~~~k~r~kv~k~L~~~G~~rvQ~SVf~~~~~~~~~~~~l~~~ 54 (95)
T TIGR01573 2 LVLVVYDIPTDGERKRRRKLRKLLEKYGLQRVQYSVFEGILEPNQLARKLIER 54 (95)
T ss_pred EEEEEEECCCCchHHHHHHHHHHHHHcchhheeccEEEEEcCHHHHHHHHHHH
Confidence 378888998876 678899999999996666555555666665555 55553
No 195
>cd01526 RHOD_ThiF Member of the Rhodanese Homology Domain superfamily. This CD includes several putative molybdopterin synthase sulfurylases including the molybdenum cofactor biosynthetic protein (CnxF) of Aspergillus nidulans and the molybdenum cofactor synthesis protein 3 (MOCS3) of Homo sapiens. These rhodanese-like domains are found C-terminal of the ThiF and MoeZ_MoeB domains.
Probab=21.99 E-value=1.4e+02 Score=23.82 Aligned_cols=33 Identities=15% Similarity=0.172 Sum_probs=26.1
Q ss_pred CCCeEEEEeccccChHhHHHHHHHHHHcCC-CeEEEE
Q 020692 224 AGCHVVIVDDLVQSGGTLIECQKVLAAHGA-AKVSAY 259 (322)
Q Consensus 224 ~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga-~~v~~~ 259 (322)
+++.++++ |.+|.....++..|++.|- ..|+.+
T Consensus 71 ~~~~ivv~---C~~G~rs~~aa~~L~~~G~~~~v~~l 104 (122)
T cd01526 71 KDSPIYVV---CRRGNDSQTAVRKLKELGLERFVRDI 104 (122)
T ss_pred CCCcEEEE---CCCCCcHHHHHHHHHHcCCccceeee
Confidence 56778887 4688888889999999999 567654
No 196
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=21.87 E-value=2.2e+02 Score=22.68 Aligned_cols=80 Identities=9% Similarity=-0.088 Sum_probs=43.3
Q ss_pred EEEecCCCHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEeccCCCCCCCeEEEEEecCCchhHHHHHHHHHHhhhcCcc
Q 020692 18 HLFYCVECEELARKVAAQSDLITLQSINWRNFADGWPNLYINSAHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLFVA 97 (322)
Q Consensus 18 ~i~~g~~~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~~~~v~g~dv~iv~s~~~~~~l~elll~~~a~~~~~a~ 97 (322)
.++..-++...|......+. .+......-+.+.|... .....+...|++|+-|.+.. --|++..++.+++.|+
T Consensus 3 ~i~G~G~S~~~A~~~~~~l~--~~~~~~~~~~~~~~~~~--~~~~~~~~~dl~I~iS~SG~--t~~~~~~~~~a~~~g~- 75 (120)
T cd05710 3 FFVGCGGSLADMYPAKYFLK--KESKLPVFVYNAAEFLH--TGPKRLTEKSVVILASHSGN--TKETVAAAKFAKEKGA- 75 (120)
T ss_pred EEEEecHHHHHHhHHHHHHH--HhcCCceEEEcHHHHhh--cCcccCCCCcEEEEEeCCCC--ChHHHHHHHHHHHcCC-
Confidence 33433345555555555552 34345555666665221 11234555788888776542 2244556778888887
Q ss_pred ceEEeec
Q 020692 98 SFTLVLP 104 (322)
Q Consensus 98 ~i~~viP 104 (322)
.+.++..
T Consensus 76 ~vi~iT~ 82 (120)
T cd05710 76 TVIGLTD 82 (120)
T ss_pred eEEEEEC
Confidence 4555554
No 197
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=21.84 E-value=4.9e+02 Score=22.00 Aligned_cols=62 Identities=13% Similarity=0.074 Sum_probs=40.8
Q ss_pred CcEEEEecCCCHHHHHHHHHHcCCccee-eeeEeeeC---CCceeEEeccCCCCCCCeEEEEEecCCch
Q 020692 15 KQVHLFYCVECEELARKVAAQSDLITLQ-SINWRNFA---DGWPNLYINSAHDIRGQHVAFLASFSSPG 79 (322)
Q Consensus 15 ~~~~i~~g~~~~~la~~ia~~lg~~~~~-~~~~~~Fp---dGE~~v~v~~~~~v~g~dv~iv~s~~~~~ 79 (322)
..+.+--.++.-.+|..++.+|+ ++.. .+.+..|. .|+ +.+.-....+|++|+||-.+.+..
T Consensus 32 ~d~vvgv~~GG~~fa~~L~~~L~-~~~v~~i~~ssY~~~~~~~--~~~~~~~~~~gk~VLIVDDIiDTG 97 (156)
T PRK09177 32 WKGIIAVTRGGLVPAAILARELG-IRLVDTVCISSYDHDNQGE--LKVLKRAEGDGEGFLVVDDLVDTG 97 (156)
T ss_pred CCEEEEEecCCeehHHHHHHHcC-CCceeEEEEEEECCCcCCc--EEEecCCCcCcCEEEEEeeeeCCH
Confidence 45666566667789999999996 7753 34444442 244 333323357899999999887664
No 198
>PRK05320 rhodanese superfamily protein; Provisional
Probab=21.70 E-value=1.6e+02 Score=27.37 Aligned_cols=33 Identities=21% Similarity=0.127 Sum_probs=28.9
Q ss_pred CCCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEE
Q 020692 223 PAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSA 258 (322)
Q Consensus 223 v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~ 258 (322)
.++|.++++ |++|.....|+..|++.|-+.|+-
T Consensus 173 ~kdk~Ivvy---C~~G~Rs~~Aa~~L~~~Gf~~V~~ 205 (257)
T PRK05320 173 LAGKTVVSF---CTGGIRCEKAAIHMQEVGIDNVYQ 205 (257)
T ss_pred cCCCeEEEE---CCCCHHHHHHHHHHHHcCCcceEE
Confidence 478888887 899999999999999999988863
No 199
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=21.66 E-value=1e+02 Score=29.51 Aligned_cols=52 Identities=19% Similarity=0.027 Sum_probs=34.9
Q ss_pred ChHhHHHHHHHHHHcCCCeEEEEEE--eccCCc-chHHHHhcccCCCccCCcCEEEEecCCcC
Q 020692 237 SGGTLIECQKVLAAHGAAKVSAYVT--HGVFPK-GSWERFTLKNGENMENAFANFWITDSCPL 296 (322)
Q Consensus 237 TG~Tl~~~~~~L~~~Ga~~v~~~~t--H~~~~~-~a~~~l~~s~~~g~~~~~~~iv~Tdti~~ 296 (322)
-..|+.+.....++.|.+ +.+++| ++-+.+ ...+.|.++| |+-.+++|+--.
T Consensus 128 ~S~~v~~~l~~A~~~~k~-~~V~VtESRP~~eG~~~ak~L~~~g-------I~~~~I~Dsa~~ 182 (301)
T COG1184 128 FSKTVLEVLKTAADRGKR-FKVIVTESRPRGEGRIMAKELRQSG-------IPVTVIVDSAVG 182 (301)
T ss_pred CcHHHHHHHHHhhhcCCc-eEEEEEcCCCcchHHHHHHHHHHcC-------CceEEEechHHH
Confidence 456777777777777754 555554 555544 2467788887 788888887543
No 200
>PF08348 PAS_6: YheO-like PAS domain; InterPro: IPR013559 This domain is found in various hypothetical bacterial proteins that are similar to the Escherichia coli protein YheO (P64624 from SWISSPROT). Their function is unknown, but a few members are annotated as being HTH-containing proteins and putative DNA-binding proteins.
Probab=21.65 E-value=3.5e+02 Score=21.95 Aligned_cols=78 Identities=9% Similarity=0.033 Sum_probs=47.4
Q ss_pred CHHHHHHHHHHcCCcceeeeeEeeeCCCceeEEecc-CCCCCCCeEEEEEecCCchhHHHHHHHHHHhhhcCccceEEee
Q 020692 25 CEELARKVAAQSDLITLQSINWRNFADGWPNLYINS-AHDIRGQHVAFLASFSSPGVIFEQISVIYALPRLFVASFTLVL 103 (322)
Q Consensus 25 ~~~la~~ia~~lg~~~~~~~~~~~FpdGE~~v~v~~-~~~v~g~dv~iv~s~~~~~~l~elll~~~a~~~~~a~~i~~vi 103 (322)
...+++-|++.|| +-.++-++.|.|.|..+ +.+ ...+.|+.+ ..+..++ ..+.+++... ....+.
T Consensus 5 y~~l~~~l~~~lG--~~~EVVLHDl~~~~~sI-v~I~Ng~vsgR~v-----Gdp~t~~-----~l~~l~~~~~-~~~~~~ 70 (118)
T PF08348_consen 5 YIPLVDFLAATLG--PNCEVVLHDLSDPEHSI-VAIANGHVSGRKV-----GDPITDL-----ALELLKEKQY-EEDYII 70 (118)
T ss_pred HHHHHHHHHHHhC--CCeEEEEEECCCCCCEE-EEEECCCccCCcc-----CCchhHH-----HHHHHhcccc-CCCccc
Confidence 4578999999998 67889999998877554 222 333666655 1222222 2233333332 566777
Q ss_pred ccCCCCccchhcc
Q 020692 104 PFFPTGSFERMEE 116 (322)
Q Consensus 104 PY~~YsRqdr~~~ 116 (322)
+|..-++--|..+
T Consensus 71 nY~~~~~~Gk~lr 83 (118)
T PF08348_consen 71 NYKTKTKDGKILR 83 (118)
T ss_pred cccccCCCCCEEE
Confidence 8887766555443
No 201
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=20.78 E-value=1.4e+02 Score=27.95 Aligned_cols=56 Identities=18% Similarity=0.241 Sum_probs=35.6
Q ss_pred HhHHHHHHHHHHcCCCeEEEEEEeccCCcchHHHHhcccCCCccCCcCEEEEecCCcC
Q 020692 239 GTLIECQKVLAAHGAAKVSAYVTHGVFPKGSWERFTLKNGENMENAFANFWITDSCPL 296 (322)
Q Consensus 239 ~Tl~~~~~~L~~~Ga~~v~~~~tH~~~~~~a~~~l~~s~~~g~~~~~~~iv~Tdti~~ 296 (322)
.|..++.+.|++.|.+.|.+-.+| ++.+.-.++|.+. ++.....+++|.+.+.+-.
T Consensus 58 ~~~~eaL~~L~~~G~~~V~VQplh-iipG~Ey~~l~~~-v~~~~~~F~~i~~g~PLL~ 113 (262)
T PF06180_consen 58 DSPEEALAKLADEGYTEVVVQPLH-IIPGEEYEKLRAT-VEAYKHDFKKIVLGRPLLY 113 (262)
T ss_dssp --HHHHHHHHHHCT--EEEEEE---SCSSHHHHHHHHH-HHHHCCCSSEEEEE--SCS
T ss_pred CCHHHHHHHHHHCCCCEEEEeecc-eeCcHhHHHHHHH-HHHhhccCCeEEecccccc
Confidence 578899999999999999999999 6666667777663 1112223789999888766
No 202
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=20.09 E-value=1.9e+02 Score=22.44 Aligned_cols=33 Identities=24% Similarity=0.154 Sum_probs=26.3
Q ss_pred CCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEE
Q 020692 224 AGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAY 259 (322)
Q Consensus 224 ~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~ 259 (322)
+++.+++++ .+|.....++..|+..|-..++.+
T Consensus 77 ~~~~iv~yc---~~g~~s~~~~~~l~~~G~~~v~~l 109 (118)
T cd01449 77 PDKPVIVYC---GSGVTACVLLLALELLGYKNVRLY 109 (118)
T ss_pred CCCCEEEEC---CcHHHHHHHHHHHHHcCCCCeeee
Confidence 678899985 467777888899999998877553
No 203
>PRK05819 deoD purine nucleoside phosphorylase; Reviewed
Probab=20.03 E-value=3.7e+02 Score=24.30 Aligned_cols=82 Identities=13% Similarity=0.082 Sum_probs=44.7
Q ss_pred CceEeccCCchHHHHHHHhc-cCCc-eEecCceeeeeccCCCCCCeEEEEeccccChHhHHHHHHHHHHcCCCeEEEEEE
Q 020692 184 NIVIAFPDDGAWKRFHKMLD-HFPT-VREGDKRIVRIKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVT 261 (322)
Q Consensus 184 ~~vvV~Pd~Ga~~ra~~~a~-~L~~-~r~~~k~~~~~~~~~v~g~~vlivDDii~TG~Tl~~~~~~L~~~Ga~~v~~~~t 261 (322)
+.+++.= --.|+..++. .++. ....+.+......+..+|+++.++-=-+-.-.+-..+.+++...|++.|.-+-+
T Consensus 14 ~~vi~~G---dp~r~~~ia~~~l~~~~~~~~~r~~~~~~G~~~g~~v~v~~tGiG~~~aai~~~eLi~~~~~~~iI~~Gt 90 (235)
T PRK05819 14 DTVLMPG---DPLRAKYIAETFLEDVVCVNEVRGMLGFTGTYKGKRVSVMGTGMGIPSISIYANELITDYGVKKLIRVGS 90 (235)
T ss_pred CeEEecC---CHHHHHHHHHHHhcCcEeeeeeccEEEEEEEECCEEEEEEecCCChhHHHHHHHHHHHhcCCcEEEEEec
Confidence 3455543 4556665654 3443 111122222233567789999998644422223333334445689999888888
Q ss_pred eccCCcc
Q 020692 262 HGVFPKG 268 (322)
Q Consensus 262 H~~~~~~ 268 (322)
.|-+.++
T Consensus 91 aG~l~~~ 97 (235)
T PRK05819 91 CGALQED 97 (235)
T ss_pred ccCCCCC
Confidence 7766543
Done!