BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020698
(322 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255550972|ref|XP_002516534.1| Poly(A) polymerase beta, putative [Ricinus communis]
gi|223544354|gb|EEF45875.1| Poly(A) polymerase beta, putative [Ricinus communis]
Length = 754
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/298 (65%), Positives = 233/298 (78%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWDPR+NP+DR H MPIITPAY CMNSS
Sbjct: 275 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRRNPRDRFHHMPIITPAYPCMNSS 334
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS+ TL+VM EQFQ GN+ICEEIEL KA+WSALFE Y FFEAY+NYLQ+DI+AADADD
Sbjct: 335 YNVSISTLRVMMEQFQYGNKICEEIELNKAQWSALFEPYLFFEAYKNYLQIDIIAADADD 394
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
LL WKGWVESR RQLTLKIE+DT G+LQCHPYPN+YID SK CP+ AFF GL R++ +
Sbjct: 395 LLAWKGWVESRLRQLTLKIERDTIGMLQCHPYPNEYIDTSKQCPHCAFFMGLQRRKGVSG 454
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD +GTV+ FR+ I+ Y + G D+Y S+ RR LP+FVFPDGYK R SRH N
Sbjct: 455 QEGQQFDIRGTVEEFRQEINMYMFWKPGMDVYVSHARRRQLPAFVFPDGYKRSRTSRHPN 514
Query: 241 EQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSPGMTT 298
+Q+GKP + ++ S E LKRK +HE+ +VRPDK K+A +S + Q VSP T
Sbjct: 515 QQAGKPSDVSATSRAGSVEGHLKRKNDHEVVDVRPDKPEKRASVSPQRLQSVSPESNT 572
>gi|356515639|ref|XP_003526506.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 732
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/296 (62%), Positives = 223/296 (75%), Gaps = 2/296 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF +WDPR+NP+DR H MPIITPAY CMNSS
Sbjct: 272 MLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHTMPIITPAYPCMNSS 331
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM +QF GN+IC+EIEL KA+WSALF+ Y FFEAY+NYLQVDI+A+D DD
Sbjct: 332 YNVSASTLRVMVDQFCYGNKICDEIELNKAQWSALFQPYIFFEAYKNYLQVDIIASDTDD 391
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
LL W+GWVESR R LTLKIE+DTNG+LQCHPYP++Y+D SKPC +SAFF GL RKE
Sbjct: 392 LLAWRGWVESRLRMLTLKIERDTNGMLQCHPYPHEYVDTSKPCAHSAFFMGLQRKEGVRG 451
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD +GTV FR+ I+ Y + G DI+ S+V R+ LP+FVFPDGYK R RH +
Sbjct: 452 QEGQQFDIRGTVDEFRQEINMYMYWKPGMDIFVSHVRRKQLPAFVFPDGYKRTRMPRHIS 511
Query: 241 EQSGKPCEDVKMCQSCS--SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 294
Q+ +D C S SER +KRK E+ + +PDK K+A IS + + VSP
Sbjct: 512 HQAEITGDDATNCYSGPGLSERCIKRKNYSEMVDKKPDKPDKRASISPQRLECVSP 567
>gi|225442450|ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 770
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/298 (61%), Positives = 220/298 (73%), Gaps = 5/298 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGFSVWDPRKNP+DR+H MPIITPAY CMNSS
Sbjct: 267 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPIITPAYPCMNSS 326
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS+ TL+VM EQFQ GN+ICE IEL A+W ALFE Y FFE+Y+NYLQVDIVA D DD
Sbjct: 327 YNVSISTLRVMMEQFQYGNKICEGIELSNAQWGALFEPYLFFESYKNYLQVDIVAVDIDD 386
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTL IE+DT G LQCHPYP++Y+D SK C + AFF GL RK+
Sbjct: 387 LRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCAFFMGLQRKQGEII 446
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD +GTV FR I+ Y + G +IY S+V R+ +PS+VFP+GYK RP R N
Sbjct: 447 QEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPEGYKRSRPQRPVN 506
Query: 241 EQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSPGMTT 298
+Q G + C++ SSE+ +KRKK+ E +V DK+ K+ IS + VSP + +
Sbjct: 507 QQQGD-----EACRTGSSEKHMKRKKDPEEVDVEQDKAAKRLTISPQRQDSVSPEIIS 559
>gi|356507941|ref|XP_003522721.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 651
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/338 (57%), Positives = 235/338 (69%), Gaps = 28/338 (8%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF +WDPR+NP+DR H MPIITPAY CMNSS
Sbjct: 271 MLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHTMPIITPAYPCMNSS 330
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM EQF+ GN+IC+EIEL KA+WSALF+ Y FFEAY+NYLQVDI+A+DADD
Sbjct: 331 YNVSASTLRVMMEQFRYGNKICDEIELNKAQWSALFQPYIFFEAYKNYLQVDIIASDADD 390
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
LL W+GWVESR R LTLKIE+DTNG+LQCHPYPN+Y+D SK C +SAFF GL RKE
Sbjct: 391 LLAWRGWVESRLRLLTLKIERDTNGMLQCHPYPNEYVDTSKLCAHSAFFMGLQRKEGVRG 450
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD +GTV FR+ I+ Y + G DI+ S+V R+ LP+FVFP GYK R RH +
Sbjct: 451 QEGQQFDIRGTVDEFRQEINMYMYWKPGMDIFVSHVRRKQLPAFVFPGGYKRTRMPRHIS 510
Query: 241 EQSGKPCEDVKMC----QSCSSERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP-- 294
Q+ K +D C S SSER +KRK E+ + +P K K+A IS + + VSP
Sbjct: 511 HQAEKTGDDATKCYSGSGSGSSERCIKRKSCPEMVDKKPGKPDKRASISPQRLECVSPES 570
Query: 295 ----------------------GMTTEDPTNNSEVMSS 310
G TT+D +N EV SS
Sbjct: 571 CTSKSGGTTQMSIECIEVVRLAGSTTKDANDNCEVKSS 608
>gi|147790301|emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera]
Length = 778
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/298 (61%), Positives = 220/298 (73%), Gaps = 5/298 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGFSVWDPRKNP+DR+H MPIITPAY CMNSS
Sbjct: 258 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPIITPAYPCMNSS 317
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS+ TL+VM EQFQ GN+ICE IEL A+W ALFE Y FFE+Y+NYLQVDIVA D DD
Sbjct: 318 YNVSISTLRVMMEQFQYGNKICEGIELSNAQWGALFEPYLFFESYKNYLQVDIVAVDIDD 377
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTL IE+DT G LQCHPYP++Y+D SK C + AFF GL RK+
Sbjct: 378 LRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCAFFMGLQRKQGEII 437
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD +GTV FR I+ Y + G +IY S+V R+ +PS+VFP+GYK RP R N
Sbjct: 438 QEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPEGYKRSRPQRPVN 497
Query: 241 EQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSPGMTT 298
+Q G + C++ SSE+ +KRKK+ E +V DK+ K+ IS + VSP + +
Sbjct: 498 QQQGD-----EACRTGSSEKHMKRKKDPEEVDVEQDKAAKRLTISPQRQDSVSPEIIS 550
>gi|297825665|ref|XP_002880715.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326554|gb|EFH56974.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 788
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/301 (62%), Positives = 219/301 (72%), Gaps = 3/301 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVY QWRWPNPVM+C IE EL F VWDPRKN +DR H MPIITPAY CMNSS
Sbjct: 272 MLVSRFFRVYIQWRWPNPVMLCTIEEDELSFPVWDPRKNHRDRYHLMPIITPAYPCMNSS 331
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VMTEQFQ GN IC+EIEL K +WS+LFE Y FFEAY+NYLQVD++A DA+D
Sbjct: 332 YNVSQSTLRVMTEQFQFGNTICQEIELNKQQWSSLFEQYMFFEAYKNYLQVDVLALDAED 391
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
LL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D SK + AFF GL R E
Sbjct: 392 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKKFRHCAFFMGLQRAEGFGG 451
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+ECQQFD +GTV FR+ ++ Y R G D+Y S+V RR LPSFVFP GYK R SRH N
Sbjct: 452 QECQQFDIRGTVDEFRQEVNMYMFWRPGMDVYVSHVRRRQLPSFVFPKGYKRPRQSRHQN 511
Query: 241 EQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS---EVPQPVSPGMT 297
+Q +P E V S S + KRK ++E + RP+K K+A S + PVS G+T
Sbjct: 512 QQCREPGEGVVGSLSDSVDGYAKRKNDNETMDTRPEKREKRASRSPHSLDAVSPVSSGIT 571
Query: 298 T 298
T
Sbjct: 572 T 572
>gi|334184470|ref|NP_001189603.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252670|gb|AEC07764.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 797
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/301 (61%), Positives = 220/301 (73%), Gaps = 3/301 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE +L F VWDPRKN +DR H MPIITPAY CMNSS
Sbjct: 271 MLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCMNSS 330
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VMTEQFQ GN IC+EIEL K WS+LF+ Y FFEAY+NYLQVD++AADA+D
Sbjct: 331 YNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQVDVLAADAED 390
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
LL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D SK + AFF GL R +
Sbjct: 391 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQRADGFGG 450
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+ECQQFD +GTV FR+ ++ Y R G D++ S+V RR LPSFVFP+GYK R SRH +
Sbjct: 451 QECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQSRHQS 510
Query: 241 EQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFIS---SEVPQPVSPGMT 297
+Q +P ++ S S ER KRK + EI RP+K K+A S + P S G+T
Sbjct: 511 QQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAASPDSSGIT 570
Query: 298 T 298
T
Sbjct: 571 T 571
>gi|297802710|ref|XP_002869239.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
gi|297315075|gb|EFH45498.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
Length = 748
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/295 (62%), Positives = 217/295 (73%), Gaps = 1/295 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWDPRKN +DR H MPIITPAY CMNSS
Sbjct: 268 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRKNHRDRYHLMPIITPAYPCMNSS 327
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VMTEQFQ GN I +EIEL K WS+LFE Y FFEAY+NYLQVDIVA DA+D
Sbjct: 328 YNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAGDAED 387
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
LL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R E
Sbjct: 388 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGG 447
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+ECQQFD +GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R SRH N
Sbjct: 448 QECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQN 507
Query: 241 EQSGKPCEDVKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 294
+ GK ED + S S ER KRK + E+ + RP+K K+A +S + VSP
Sbjct: 508 QPGGKSGEDGTVSHSGSVVERHAKRKNDSEMMDARPEKPEKRASLSPQSLDIVSP 562
>gi|449461393|ref|XP_004148426.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 863
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/301 (62%), Positives = 218/301 (72%), Gaps = 4/301 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWDPR+NP+DR H MPIITPAY CMNSS
Sbjct: 267 MLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHLMPIITPAYPCMNSS 326
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM EQF+ GN ICEEI+L KA+WSALFE Y FFE Y+NYLQVDI+AADADD
Sbjct: 327 YNVSTSTLRVMMEQFRYGNSICEEIDLSKAQWSALFEPYLFFETYKNYLQVDIIAADADD 386
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
LL WKGWVESRFRQLTLKIE+DT G+LQCHPYP +Y D SKPC + AFF GL RKE
Sbjct: 387 LLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPIEYSDTSKPCSHCAFFMGLQRKEGLRG 446
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+ QQFD +GTV FR+ I+ Y + G DIY S+V R+ LP+FVFPDG+K +P RH
Sbjct: 447 QGGQQFDIRGTVDEFRQEINMYAFWKPGMDIYVSHVRRKQLPTFVFPDGHKRAKPLRHEG 506
Query: 241 EQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSPGMTTED 300
+Q C D+ QS +E+ KRK +HE +E K KQA IS Q P D
Sbjct: 507 QQVDTVCADMLQDQSGITEKGKKRKSDHEEEE----KEKKQALISPPAEQSPMPEFFGGD 562
Query: 301 P 301
P
Sbjct: 563 P 563
>gi|18400958|ref|NP_565611.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|31747891|gb|AAF66438.2|AF255297_1 nuclear poly(A) polymerase [Arabidopsis thaliana]
gi|14532700|gb|AAK64151.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|18491197|gb|AAL69501.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|20197361|gb|AAC42245.2| putative poly(A) polymerase [Arabidopsis thaliana]
gi|330252667|gb|AEC07761.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 800
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/301 (61%), Positives = 220/301 (73%), Gaps = 3/301 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE +L F VWDPRKN +DR H MPIITPAY CMNSS
Sbjct: 271 MLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCMNSS 330
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VMTEQFQ GN IC+EIEL K WS+LF+ Y FFEAY+NYLQVD++AADA+D
Sbjct: 331 YNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQVDVLAADAED 390
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
LL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D SK + AFF GL R +
Sbjct: 391 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQRADGFGG 450
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+ECQQFD +GTV FR+ ++ Y R G D++ S+V RR LPSFVFP+GYK R SRH +
Sbjct: 451 QECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQSRHQS 510
Query: 241 EQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFIS---SEVPQPVSPGMT 297
+Q +P ++ S S ER KRK + EI RP+K K+A S + P S G+T
Sbjct: 511 QQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAASPDSSGIT 570
Query: 298 T 298
T
Sbjct: 571 T 571
>gi|79323064|ref|NP_001031417.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252669|gb|AEC07763.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 786
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/301 (61%), Positives = 220/301 (73%), Gaps = 3/301 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE +L F VWDPRKN +DR H MPIITPAY CMNSS
Sbjct: 271 MLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCMNSS 330
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VMTEQFQ GN IC+EIEL K WS+LF+ Y FFEAY+NYLQVD++AADA+D
Sbjct: 331 YNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQVDVLAADAED 390
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
LL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D SK + AFF GL R +
Sbjct: 391 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQRADGFGG 450
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+ECQQFD +GTV FR+ ++ Y R G D++ S+V RR LPSFVFP+GYK R SRH +
Sbjct: 451 QECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQSRHQS 510
Query: 241 EQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFIS---SEVPQPVSPGMT 297
+Q +P ++ S S ER KRK + EI RP+K K+A S + P S G+T
Sbjct: 511 QQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAASPDSSGIT 570
Query: 298 T 298
T
Sbjct: 571 T 571
>gi|30682917|ref|NP_850071.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252668|gb|AEC07762.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 787
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/301 (61%), Positives = 220/301 (73%), Gaps = 3/301 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE +L F VWDPRKN +DR H MPIITPAY CMNSS
Sbjct: 271 MLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPIITPAYPCMNSS 330
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VMTEQFQ GN IC+EIEL K WS+LF+ Y FFEAY+NYLQVD++AADA+D
Sbjct: 331 YNVSQSTLRVMTEQFQFGNTICQEIELNKQHWSSLFQQYMFFEAYKNYLQVDVLAADAED 390
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
LL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D SK + AFF GL R +
Sbjct: 391 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCAFFMGLQRADGFGG 450
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+ECQQFD +GTV FR+ ++ Y R G D++ S+V RR LPSFVFP+GYK R SRH +
Sbjct: 451 QECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFPNGYKRSRQSRHQS 510
Query: 241 EQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFIS---SEVPQPVSPGMT 297
+Q +P ++ S S ER KRK + EI RP+K K+A S + P S G+T
Sbjct: 511 QQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLHTLDAASPDSSGIT 570
Query: 298 T 298
T
Sbjct: 571 T 571
>gi|32527646|gb|AAP86216.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 737
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/295 (62%), Positives = 217/295 (73%), Gaps = 1/295 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWD RKN +DR H MPIITPAY CMNSS
Sbjct: 268 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 327
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VMTEQFQ GN I +EIEL K WS+LFE Y FFEAY+NYLQVDIVAADA+D
Sbjct: 328 YNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAADAED 387
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
LL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R E
Sbjct: 388 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGG 447
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+ECQQFD +GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R SRH N
Sbjct: 448 QECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQN 507
Query: 241 EQSGKPCEDVKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 294
GK ED + S S ER KRK + E+ +VRP+K K+A +S + VSP
Sbjct: 508 LPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSP 562
>gi|42570181|ref|NP_849562.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|79610218|ref|NP_974670.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660726|gb|AEE86126.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660728|gb|AEE86128.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 738
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/295 (62%), Positives = 217/295 (73%), Gaps = 1/295 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWD RKN +DR H MPIITPAY CMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VMTEQFQ GN I +EIEL K WS+LFE Y FFEAY+NYLQVDIVAADA+D
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAADAED 388
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
LL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R E
Sbjct: 389 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGG 448
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+ECQQFD +GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R SRH N
Sbjct: 449 QECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQN 508
Query: 241 EQSGKPCEDVKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 294
GK ED + S S ER KRK + E+ +VRP+K K+A +S + VSP
Sbjct: 509 LPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSP 563
>gi|79326212|ref|NP_001031779.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660733|gb|AEE86133.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 765
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/295 (62%), Positives = 217/295 (73%), Gaps = 1/295 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWD RKN +DR H MPIITPAY CMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VMTEQFQ GN I +EIEL K WS+LFE Y FFEAY+NYLQVDIVAADA+D
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAADAED 388
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
LL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R E
Sbjct: 389 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGG 448
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+ECQQFD +GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R SRH N
Sbjct: 449 QECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQN 508
Query: 241 EQSGKPCEDVKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 294
GK ED + S S ER KRK + E+ +VRP+K K+A +S + VSP
Sbjct: 509 LPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSP 563
>gi|42573145|ref|NP_974669.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|186515704|ref|NP_001119102.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|222422953|dbj|BAH19461.1| AT4G32850 [Arabidopsis thaliana]
gi|332660729|gb|AEE86129.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660734|gb|AEE86134.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/295 (62%), Positives = 217/295 (73%), Gaps = 1/295 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWD RKN +DR H MPIITPAY CMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VMTEQFQ GN I +EIEL K WS+LFE Y FFEAY+NYLQVDIVAADA+D
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAADAED 388
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
LL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R E
Sbjct: 389 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGG 448
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+ECQQFD +GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R SRH N
Sbjct: 449 QECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQN 508
Query: 241 EQSGKPCEDVKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 294
GK ED + S S ER KRK + E+ +VRP+K K+A +S + VSP
Sbjct: 509 LPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSP 563
>gi|30689510|ref|NP_849561.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|17978937|gb|AAL47435.1| AT4g32850/T16I18_60 [Arabidopsis thaliana]
gi|23308169|gb|AAN18054.1| At4g32850/T16I18_60 [Arabidopsis thaliana]
gi|332660730|gb|AEE86130.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 741
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/295 (62%), Positives = 217/295 (73%), Gaps = 1/295 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWD RKN +DR H MPIITPAY CMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VMTEQFQ GN I +EIEL K WS+LFE Y FFEAY+NYLQVDIVAADA+D
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAADAED 388
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
LL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R E
Sbjct: 389 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGG 448
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+ECQQFD +GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R SRH N
Sbjct: 449 QECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQN 508
Query: 241 EQSGKPCEDVKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 294
GK ED + S S ER KRK + E+ +VRP+K K+A +S + VSP
Sbjct: 509 LPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSP 563
>gi|42567333|ref|NP_195011.4| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660727|gb|AEE86127.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 735
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/295 (62%), Positives = 217/295 (73%), Gaps = 1/295 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWD RKN +DR H MPIITPAY CMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VMTEQFQ GN I +EIEL K WS+LFE Y FFEAY+NYLQVDIVAADA+D
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAADAED 388
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
LL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R E
Sbjct: 389 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGG 448
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+ECQQFD +GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R SRH N
Sbjct: 449 QECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQN 508
Query: 241 EQSGKPCEDVKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 294
GK ED + S S ER KRK + E+ +VRP+K K+A +S + VSP
Sbjct: 509 LPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSP 563
>gi|186515708|ref|NP_001119103.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|227202692|dbj|BAH56819.1| AT4G32850 [Arabidopsis thaliana]
gi|332660735|gb|AEE86135.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/295 (62%), Positives = 217/295 (73%), Gaps = 1/295 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWD RKN +DR H MPIITPAY CMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VMTEQFQ GN I +EIEL K WS+LFE Y FFEAY+NYLQVDIVAADA+D
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAADAED 388
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
LL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R E
Sbjct: 389 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGG 448
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+ECQQFD +GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R SRH N
Sbjct: 449 QECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQN 508
Query: 241 EQSGKPCEDVKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 294
GK ED + S S ER KRK + E+ +VRP+K K+A +S + VSP
Sbjct: 509 LPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSP 563
>gi|7270232|emb|CAB80002.1| putative poly(A) polymerase [Arabidopsis thaliana]
Length = 729
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 184/295 (62%), Positives = 217/295 (73%), Gaps = 1/295 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWD RKN +DR H MPIITPAY CMNSS
Sbjct: 268 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 327
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VMTEQFQ GN I +EIEL K WS+LFE Y FFEAY+NYLQVDIVAADA+D
Sbjct: 328 YNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAADAED 387
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
LL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R E
Sbjct: 388 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGG 447
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+ECQQFD +GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R SRH N
Sbjct: 448 QECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQN 507
Query: 241 EQSGKPCEDVKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 294
GK ED + S S ER KRK + E+ +VRP+K K+A +S + VSP
Sbjct: 508 LPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSP 562
>gi|42573143|ref|NP_974668.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660731|gb|AEE86131.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 730
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 184/295 (62%), Positives = 217/295 (73%), Gaps = 1/295 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWD RKN +DR H MPIITPAY CMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VMTEQFQ GN I +EIEL K WS+LFE Y FFEAY+NYLQVDIVAADA+D
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAADAED 388
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
LL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R E
Sbjct: 389 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGG 448
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+ECQQFD +GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R SRH N
Sbjct: 449 QECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQN 508
Query: 241 EQSGKPCEDVKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 294
GK ED + S S ER KRK + E+ +VRP+K K+A +S + VSP
Sbjct: 509 LPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSP 563
>gi|79326203|ref|NP_001031778.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660732|gb|AEE86132.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 716
Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 184/295 (62%), Positives = 217/295 (73%), Gaps = 1/295 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWD RKN +DR H MPIITPAY CMNSS
Sbjct: 269 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPIITPAYPCMNSS 328
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VMTEQFQ GN I +EIEL K WS+LFE Y FFEAY+NYLQVDIVAADA+D
Sbjct: 329 YNVSQSTLRVMTEQFQFGNNILQEIELNKQHWSSLFEQYMFFEAYKNYLQVDIVAADAED 388
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
LL WKGWVESRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R E
Sbjct: 389 LLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGG 448
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+ECQQFD +GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R SRH N
Sbjct: 449 QECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQN 508
Query: 241 EQSGKPCEDVKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 294
GK ED + S S ER KRK + E+ +VRP+K K+A +S + VSP
Sbjct: 509 LPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSP 563
>gi|255549812|ref|XP_002515957.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544862|gb|EEF46377.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 712
Score = 366 bits (940), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 182/300 (60%), Positives = 218/300 (72%), Gaps = 2/300 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+CPIE ELGFS+WDPRKNP+DR+H MPIITPAY CMNSS
Sbjct: 229 MLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSIWDPRKNPRDRTHHMPIITPAYPCMNSS 288
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM EQFQ GN+ICEEIEL K +W+ LFE Y FFE+Y+NYLQVDIVA D DD
Sbjct: 289 YNVSTSTLRVMMEQFQYGNKICEEIELIKTQWATLFEPYLFFESYKNYLQVDIVATDVDD 348
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTL I++DT G LQCHPYP++Y+D SKPC + AFF GL RK+
Sbjct: 349 LRAWKGWVESRLRQLTLMIDRDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKQGEMI 408
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR-PSRHF 239
+E QQFD +GTV FR I+ Y + G +IY S+V R+ +PS+VFPDGY+ R P
Sbjct: 409 QEGQQFDIRGTVDEFRNSINMYMFWKPGMEIYVSHVRRKQIPSYVFPDGYRRARHPRVTA 468
Query: 240 NEQSGKP-CEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSPGMTT 298
+QS K C D + SSER KRKK+ + +V+ D K+ IS + VSP + T
Sbjct: 469 QQQSDKTCCGDSDAYGNGSSERGHKRKKDSDEIDVKNDMPEKRNSISPQRRDSVSPDIFT 528
>gi|326505742|dbj|BAJ95542.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 694
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 182/309 (58%), Positives = 222/309 (71%), Gaps = 6/309 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQWRWP PVM+C IE ELGF VWDPRKNP+DR+H MPIITPAY CMNSS
Sbjct: 250 MLVSRFFRVFTQWRWPTPVMLCAIEEEELGFPVWDPRKNPRDRTHHMPIITPAYPCMNSS 309
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM EQFQ GN+IC+EIE+ KA WSALFE + FFEAY+NYLQVDI+A D +D
Sbjct: 310 YNVSTSTLRVMIEQFQFGNKICQEIEMNKASWSALFEPFNFFEAYKNYLQVDIIAEDDED 369
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+DT G LQCHPYP +Y DPS+ C + AFF GLSRKE
Sbjct: 370 LRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPYEYADPSRQCAHCAFFMGLSRKEGVKI 429
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD +GTV FR I+ Y + G ++ S+V R+ +P++VFP+GYK RP RH N
Sbjct: 430 QEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKEIPAYVFPEGYKRPRPQRHVN 489
Query: 241 EQSGKPCEDVKMCQSCSSERQLKRKKEHE-IKEVRPDKSVKQAFISSEVPQPVSP--GMT 297
Q D + S + QLKRK + I + P +SVK+A IS P+ SP G
Sbjct: 490 HQHQSDKNDPG---NGSPDSQLKRKHDSTGIDDTEPCQSVKRASISPGHPKTSSPRSGNV 546
Query: 298 TEDPTNNSE 306
+++P +NS+
Sbjct: 547 SDEPISNSQ 555
>gi|449515462|ref|XP_004164768.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 544
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 173/259 (66%), Positives = 199/259 (76%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGF VWDPR+NP+DR H MPIITPAY CMNSS
Sbjct: 267 MLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHLMPIITPAYPCMNSS 326
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM EQF+ GN ICEEI+L KA+WSALFE Y FFE Y+NYLQVDI+AADADD
Sbjct: 327 YNVSTSTLRVMMEQFRYGNSICEEIDLSKAQWSALFEPYLFFETYKNYLQVDIIAADADD 386
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
LL WKGWVESRFRQLTLKIE+DT G+LQCHPYP +Y D SKPC + AFF GL RKE
Sbjct: 387 LLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPIEYSDTSKPCSHCAFFMGLQRKEGLRG 446
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+ QQFD +GTV FR+ I+ Y + G DIY S+V R+ LP+FVFPDG+K +P RH
Sbjct: 447 QGGQQFDIRGTVDEFRQEINMYAFWKPGMDIYVSHVRRKQLPTFVFPDGHKRAKPLRHEG 506
Query: 241 EQSGKPCEDVKMCQSCSSE 259
+Q C D+ QS +E
Sbjct: 507 QQVDTVCADMLQDQSGITE 525
>gi|53792977|dbj|BAD54151.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
Length = 740
Score = 353 bits (907), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 185/320 (57%), Positives = 224/320 (70%), Gaps = 6/320 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE ELGF VWDPRK +DRSH MPIITPAY CMNSS
Sbjct: 268 MLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCMNSS 327
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM EQFQ GN+IC+EI++ KA WSALFE + FFEAY+NYLQVDI+A D +D
Sbjct: 328 YNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNYLQVDIIAEDGED 387
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+DT G+LQCHPYP++Y DPS+ C + AFF GLSRKE
Sbjct: 388 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGAKI 447
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD +GTV FR I Y R G ++ S+V R+ +PS+VFP+GYK RPSRH N
Sbjct: 448 QEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRPSRHIN 507
Query: 241 EQSGKPCEDVK-MCQSCSSERQLKRKKEHE-IKEVRPDKSVKQAFISSEVPQPVSPGMTT 298
DV+ + S + Q KRK + + + P +SVK+A IS + PV T+
Sbjct: 508 HPQQSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASISPSI-SPVHQ-KTS 565
Query: 299 EDPTNNSEVMS--SGGHLVS 316
P+ N S SGG VS
Sbjct: 566 SPPSGNIADASGASGGSPVS 585
>gi|125597568|gb|EAZ37348.1| hypothetical protein OsJ_21686 [Oryza sativa Japonica Group]
Length = 761
Score = 353 bits (906), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 185/320 (57%), Positives = 224/320 (70%), Gaps = 6/320 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE ELGF VWDPRK +DRSH MPIITPAY CMNSS
Sbjct: 266 MLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCMNSS 325
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM EQFQ GN+IC+EI++ KA WSALFE + FFEAY+NYLQVDI+A D +D
Sbjct: 326 YNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNYLQVDIIAEDGED 385
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+DT G+LQCHPYP++Y DPS+ C + AFF GLSRKE
Sbjct: 386 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGAKI 445
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD +GTV FR I Y R G ++ S+V R+ +PS+VFP+GYK RPSRH N
Sbjct: 446 QEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRPSRHIN 505
Query: 241 EQSGKPCEDVKMCQSCSS-ERQLKRKKEHE-IKEVRPDKSVKQAFISSEVPQPVSPGMTT 298
DV+ + S + Q KRK + + + P +SVK+A IS + PV T+
Sbjct: 506 HPQQSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASISPSI-SPVHQ-KTS 563
Query: 299 EDPTNNSEVMS--SGGHLVS 316
P+ N S SGG VS
Sbjct: 564 SPPSGNIADASGASGGSPVS 583
>gi|125555729|gb|EAZ01335.1| hypothetical protein OsI_23369 [Oryza sativa Indica Group]
Length = 760
Score = 353 bits (906), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 185/320 (57%), Positives = 224/320 (70%), Gaps = 6/320 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE ELGF VWDPRK +DRSH MPIITPAY CMNSS
Sbjct: 266 MLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCMNSS 325
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM EQFQ GN+IC+EI++ KA WSALFE + FFEAY+NYLQVDI+A D +D
Sbjct: 326 YNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNYLQVDIIAEDGED 385
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+DT G+LQCHPYP++Y DPS+ C + AFF GLSRKE
Sbjct: 386 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGAKI 445
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD +GTV FR I Y R G ++ S+V R+ +PS+VFP+GYK RPSRH N
Sbjct: 446 QEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRPSRHIN 505
Query: 241 EQSGKPCEDVKMCQSCSS-ERQLKRKKEHE-IKEVRPDKSVKQAFISSEVPQPVSPGMTT 298
DV+ + S + Q KRK + + + P +SVK+A IS + PV T+
Sbjct: 506 HPQQSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASISPSI-SPVHQ-KTS 563
Query: 299 EDPTNNSEVMS--SGGHLVS 316
P+ N S SGG VS
Sbjct: 564 SPPSGNIADASGASGGSPVS 583
>gi|58220767|gb|AAW68015.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 708
Score = 353 bits (906), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 185/320 (57%), Positives = 224/320 (70%), Gaps = 6/320 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE ELGF VWDPRK +DRSH MPIITPAY CMNSS
Sbjct: 268 MLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCMNSS 327
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM EQFQ GN+IC+EI++ KA WSALFE + FFEAY+NYLQVDI+A D +D
Sbjct: 328 YNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNYLQVDIIAEDGED 387
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+DT G+LQCHPYP++Y DPS+ C + AFF GLSRKE
Sbjct: 388 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGAKI 447
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD +GTV FR I Y R G ++ S+V R+ +PS+VFP+GYK RPSRH N
Sbjct: 448 QEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRPSRHIN 507
Query: 241 EQSGKPCEDVKMCQSCSS-ERQLKRKKEHE-IKEVRPDKSVKQAFISSEVPQPVSPGMTT 298
DV+ + S + Q KRK + + + P +SVK+A IS + PV T+
Sbjct: 508 HPQQSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASISPSI-SPVHQ-KTS 565
Query: 299 EDPTNNSEVMS--SGGHLVS 316
P+ N S SGG VS
Sbjct: 566 SPPSGNIADASGASGGSPVS 585
>gi|297724965|ref|NP_001174846.1| Os06g0558700 [Oryza sativa Japonica Group]
gi|255677141|dbj|BAH93574.1| Os06g0558700 [Oryza sativa Japonica Group]
Length = 708
Score = 353 bits (906), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 185/320 (57%), Positives = 224/320 (70%), Gaps = 6/320 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE ELGF VWDPRK +DRSH MPIITPAY CMNSS
Sbjct: 268 MLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPIITPAYPCMNSS 327
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM EQFQ GN+IC+EI++ KA WSALFE + FFEAY+NYLQVDI+A D +D
Sbjct: 328 YNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNYLQVDIIAEDGED 387
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+DT G+LQCHPYP++Y DPS+ C + AFF GLSRKE
Sbjct: 388 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGAKI 447
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD +GTV FR I Y R G ++ S+V R+ +PS+VFP+GYK RPSRH N
Sbjct: 448 QEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRPSRHIN 507
Query: 241 EQSGKPCEDVKMCQSCSS-ERQLKRKKEHE-IKEVRPDKSVKQAFISSEVPQPVSPGMTT 298
DV+ + S + Q KRK + + + P +SVK+A IS + PV T+
Sbjct: 508 HPQQSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASISPSI-SPVHQ-KTS 565
Query: 299 EDPTNNSEVMS--SGGHLVS 316
P+ N S SGG VS
Sbjct: 566 SPPSGNIADASGASGGSPVS 585
>gi|297743180|emb|CBI36047.3| unnamed protein product [Vitis vinifera]
Length = 677
Score = 353 bits (906), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 175/287 (60%), Positives = 204/287 (71%), Gaps = 7/287 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGFSVWDPRKNP+DR+H MPIITPAY CMNSS
Sbjct: 267 MLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPIITPAYPCMNSS 326
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS+ TL+VM EQFQ GN+ICE IEL A+W ALFE Y FFE+Y+NYLQVDIVA D DD
Sbjct: 327 YNVSISTLRVMMEQFQYGNKICEGIELSNAQWGALFEPYLFFESYKNYLQVDIVAVDIDD 386
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTL IE+DT G LQCHPYP++Y+D SK C + AFF GL RK+
Sbjct: 387 LRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCAFFMGLQRKQGEII 446
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD +GTV FR I+ Y + G +IY S+V R+ +PS+VFP+GYK RP R N
Sbjct: 447 QEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFPEGYKRSRPQRPVN 506
Query: 241 EQSGKPCEDVKMC------QSCSSERQLKR-KKEHEIKEVRPDKSVK 280
+Q G ++ S S E R K E + PDKS K
Sbjct: 507 QQQGDEASAKRLTISPQRQDSVSPEIISHRWMKADEKGNIEPDKSDK 553
>gi|357124126|ref|XP_003563757.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 700
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/320 (55%), Positives = 218/320 (68%), Gaps = 8/320 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQWRWPNPVM+C IE ELGF VWDPRKNP+DR+H MPIITPAY CMNSS
Sbjct: 250 MLVSRFFRVFTQWRWPNPVMLCAIEEEELGFPVWDPRKNPRDRTHHMPIITPAYPCMNSS 309
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM EQFQ GN+IC+EIEL KA W ALFE + FFEAY+NYLQVDI+A D +D
Sbjct: 310 YNVSTSTLRVMIEQFQFGNKICQEIELNKANWPALFESFQFFEAYKNYLQVDIIAEDDED 369
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+DT G LQCHPYP +Y DPS+ C + AFF GLSR
Sbjct: 370 LRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPYEYADPSRQCAHCAFFMGLSRNVGVKI 429
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD +GTV FR I+ Y + G ++ S+V R+ +P++VFP+GY+ RP RH +
Sbjct: 430 EEGQQFDIRGTVDEFRHDINMYMFWKPGMELAVSHVRRKEIPAYVFPEGYRRPRPQRHVS 489
Query: 241 EQSGKPCEDVKMCQSCSS-ERQLKRKKEHE-IKEVRPDKSVKQAFISSEVP------QPV 292
Q D + S + QLKRK + + P +SVK+A +S P P
Sbjct: 490 HQQQSDKNDTENGNMTGSPDGQLKRKHDSAGTDDTEPCRSVKRASRASVSPVHPTTSSPS 549
Query: 293 SPGMTTEDPTNNSEVMSSGG 312
S ++ E NN + MSS
Sbjct: 550 SGNISDEATCNNQKKMSSNA 569
>gi|293335951|ref|NP_001168358.1| uncharacterized protein LOC100382126 [Zea mays]
gi|223947741|gb|ACN27954.1| unknown [Zea mays]
gi|413943856|gb|AFW76505.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 694
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 171/268 (63%), Positives = 202/268 (75%), Gaps = 3/268 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE ELGF VWDPRKNP+DR H MPIITPAY CMNSS
Sbjct: 259 MLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM EQFQ GNRIC+EIE+ K W ALFE + FFEAY+NYLQVDI+A D +D
Sbjct: 319 YNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAEDDED 378
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+DT G+LQCHPYP++Y DPS+ C + AFF GLSRKE
Sbjct: 379 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKI 438
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD +GTV FR I+ Y + G ++ S+V R+ +P++VFP+GYK RPSRH N
Sbjct: 439 QEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSRHVN 498
Query: 241 EQSGK-PCEDVKMCQSCSSERQLKRKKE 267
QS K ED +S S QLKRK +
Sbjct: 499 HQSDKNDTEDGTATRSPDS--QLKRKHD 524
>gi|413943851|gb|AFW76500.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943852|gb|AFW76501.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 702
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 171/268 (63%), Positives = 202/268 (75%), Gaps = 3/268 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE ELGF VWDPRKNP+DR H MPIITPAY CMNSS
Sbjct: 259 MLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM EQFQ GNRIC+EIE+ K W ALFE + FFEAY+NYLQVDI+A D +D
Sbjct: 319 YNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAEDDED 378
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+DT G+LQCHPYP++Y DPS+ C + AFF GLSRKE
Sbjct: 379 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKI 438
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD +GTV FR I+ Y + G ++ S+V R+ +P++VFP+GYK RPSRH N
Sbjct: 439 QEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSRHVN 498
Query: 241 EQSGK-PCEDVKMCQSCSSERQLKRKKE 267
QS K ED +S S QLKRK +
Sbjct: 499 HQSDKNDTEDGTATRSPDS--QLKRKHD 524
>gi|413943853|gb|AFW76502.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 696
Score = 350 bits (898), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 171/268 (63%), Positives = 202/268 (75%), Gaps = 3/268 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE ELGF VWDPRKNP+DR H MPIITPAY CMNSS
Sbjct: 259 MLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM EQFQ GNRIC+EIE+ K W ALFE + FFEAY+NYLQVDI+A D +D
Sbjct: 319 YNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAEDDED 378
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+DT G+LQCHPYP++Y DPS+ C + AFF GLSRKE
Sbjct: 379 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKI 438
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD +GTV FR I+ Y + G ++ S+V R+ +P++VFP+GYK RPSRH N
Sbjct: 439 QEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSRHVN 498
Query: 241 EQSGK-PCEDVKMCQSCSSERQLKRKKE 267
QS K ED +S S QLKRK +
Sbjct: 499 HQSDKNDTEDGTATRSPDS--QLKRKHD 524
>gi|413943854|gb|AFW76503.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943855|gb|AFW76504.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 686
Score = 350 bits (898), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 171/268 (63%), Positives = 202/268 (75%), Gaps = 3/268 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE ELGF VWDPRKNP+DR H MPIITPAY CMNSS
Sbjct: 259 MLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM EQFQ GNRIC+EIE+ K W ALFE + FFEAY+NYLQVDI+A D +D
Sbjct: 319 YNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAEDDED 378
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+DT G+LQCHPYP++Y DPS+ C + AFF GLSRKE
Sbjct: 379 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKI 438
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD +GTV FR I+ Y + G ++ S+V R+ +P++VFP+GYK RPSRH N
Sbjct: 439 QEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSRHVN 498
Query: 241 EQSGK-PCEDVKMCQSCSSERQLKRKKE 267
QS K ED +S S QLKRK +
Sbjct: 499 HQSDKNDTEDGTATRSPDS--QLKRKHD 524
>gi|238013826|gb|ACR37948.1| unknown [Zea mays]
Length = 428
Score = 350 bits (897), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 171/268 (63%), Positives = 202/268 (75%), Gaps = 3/268 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE ELGF VWDPRKNP+DR H MPIITPAY CMNSS
Sbjct: 1 MLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 60
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM EQFQ GNRIC+EIE+ K W ALFE + FFEAY+NYLQVDI+A D +D
Sbjct: 61 YNVSTSTLRVMLEQFQFGNRICQEIEMNKTSWPALFEPFQFFEAYKNYLQVDIIAEDDED 120
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+DT G+LQCHPYP++Y DPS+ C + AFF GLSRKE
Sbjct: 121 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGVKI 180
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD +GTV FR I+ Y + G ++ S+V R+ +P++VFP+GYK RPSRH N
Sbjct: 181 QEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSRHVN 240
Query: 241 EQSGK-PCEDVKMCQSCSSERQLKRKKE 267
QS K ED +S S QLKRK +
Sbjct: 241 HQSDKNDTEDGTATRSPDS--QLKRKHD 266
>gi|449480779|ref|XP_004155993.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 758
Score = 349 bits (896), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 176/306 (57%), Positives = 215/306 (70%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML+SRFFRVYT WRWPNPVM+C IE +LG SVWDPRKNP+DR+H MPIITPAY CMNSS
Sbjct: 274 MLLSRFFRVYTLWRWPNPVMLCAIEEDDLGCSVWDPRKNPRDRTHHMPIITPAYPCMNSS 333
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM EQFQ GN++CEEIEL KA+WS+LFE Y FFE+Y+NYLQVDIVAADADD
Sbjct: 334 YNVSTSTLRVMMEQFQFGNKVCEEIELNKAQWSSLFEPYLFFESYKNYLQVDIVAADADD 393
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L +WKGWVESRFR LTL IE+ T G LQCHPYP++Y+D SKPC + AFF GL RK+
Sbjct: 394 LRSWKGWVESRFRHLTLLIERKTEGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKQGEII 453
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD + +V F+ +Y + G +I+ S+V RR +P FVFP+G+K R SR
Sbjct: 454 QEGQQFDIRSSVDEFKHYTSSYMFWKPGMEIFVSHVRRRQIPPFVFPEGHKRFRASRLSA 513
Query: 241 EQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSPGMTTED 300
Q EDV+ +S S ER LKRK + E + K+ IS VS ++
Sbjct: 514 LQRSPNQEDVQNGRSGSCERDLKRKNDPARIEGEHNSPQKRQSISPRRQDSVSSNISNFS 573
Query: 301 PTNNSE 306
T +SE
Sbjct: 574 NTASSE 579
>gi|449448062|ref|XP_004141785.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 772
Score = 348 bits (894), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 176/306 (57%), Positives = 215/306 (70%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML+SRFFRVYT WRWPNPVM+C IE +LG SVWDPRKNP+DR+H MPIITPAY CMNSS
Sbjct: 288 MLLSRFFRVYTLWRWPNPVMLCAIEEDDLGCSVWDPRKNPRDRTHHMPIITPAYPCMNSS 347
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM EQFQ GN++CEEIEL KA+WS+LFE Y FFE+Y+NYLQVDIVAADADD
Sbjct: 348 YNVSTSTLRVMMEQFQFGNKVCEEIELNKAQWSSLFEPYLFFESYKNYLQVDIVAADADD 407
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L +WKGWVESRFR LTL IE+ T G LQCHPYP++Y+D SKPC + AFF GL RK+
Sbjct: 408 LRSWKGWVESRFRHLTLLIERKTEGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKQGEII 467
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD + +V F+ +Y + G +I+ S+V RR +P FVFP+G+K R SR
Sbjct: 468 QEGQQFDIRSSVDEFKHYTSSYMFWKPGMEIFVSHVRRRQIPPFVFPEGHKRFRASRLSA 527
Query: 241 EQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSPGMTTED 300
Q EDV+ +S S ER LKRK + E + K+ IS VS ++
Sbjct: 528 LQRSPNQEDVQNGRSGSCERDLKRKNDPARIEGEHNSPQKRQSISPRRQDSVSSNISNFS 587
Query: 301 PTNNSE 306
T +SE
Sbjct: 588 NTASSE 593
>gi|224284360|gb|ACN39915.1| unknown [Picea sitchensis]
Length = 701
Score = 347 bits (889), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 182/326 (55%), Positives = 225/326 (69%), Gaps = 23/326 (7%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQWRWPNPVM+ I+ ELGF VWDPRKNP+DR+H MPIITPAY MNSS
Sbjct: 268 MLVSRFFRVFTQWRWPNPVMLRSIKEEELGFPVWDPRKNPRDRTHHMPIITPAYPGMNSS 327
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VMTEQFQ GN++CE+IE+ KA WSALF+ YPFFEAY+NYLQVDIVAAD DD
Sbjct: 328 YNVSTSTLRVMTEQFQQGNKMCEDIEMNKANWSALFDPYPFFEAYKNYLQVDIVAADQDD 387
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+DT G+LQCHPYP +Y+D SK CP+ AFF GL RK+
Sbjct: 388 LRLWKGWVESRLRQLTLKIERDTFGMLQCHPYPTEYVDNSKQCPHCAFFMGLQRKQGVLI 447
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD +GTV FR+ + Y + G DIY S+V R+ +PS+VFP+G + R R N
Sbjct: 448 QEGQQFDIRGTVDEFRQSVGMYMFWKPGMDIYVSHVRRKQIPSYVFPEGVRRVRSGRAAN 507
Query: 241 ----------EQSGKPC------EDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFI 284
E S K C + V+ C + S+E+ KRK H++ K+ K+A +
Sbjct: 508 QIGKTSPQGRESSPKCCNGNFGDDIVEECNANSAEKANKRK--HDMT-TDVGKAEKRAAV 564
Query: 285 SSEVPQPV-SPGMTTEDPTNNSEVMS 309
S P V S ++ D +N S + S
Sbjct: 565 S---PNDVKSASLSVSDVSNRSGLAS 587
>gi|357513525|ref|XP_003627051.1| Poly(A) polymerase [Medicago truncatula]
gi|355521073|gb|AET01527.1| Poly(A) polymerase [Medicago truncatula]
Length = 633
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 168/293 (57%), Positives = 206/293 (70%), Gaps = 4/293 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE ELGFSVW P +NP+DRSH MPIITPAY CMNSS
Sbjct: 180 MLVSRFFRVYTQWRWPNPVMLCSIEENELGFSVWHPLRNPRDRSHLMPIITPAYPCMNSS 239
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM EQFQ GN+ICE+IEL K WSALF Y FFE Y+N+LQ+D+VAAD DD
Sbjct: 240 YNVSASTLRVMMEQFQYGNKICEDIELNKVGWSALFVPYVFFEGYKNFLQIDVVAADVDD 299
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTL IE+DT G LQCHPYP +YID ++ C +SAFF GL RK+
Sbjct: 300 LRAWKGWVESRLRQLTLMIERDTIGKLQCHPYPREYIDDTRKCSHSAFFMGLQRKQGEVV 359
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD +GTV+ FR I+ Y + G DI+ S++ RR +P +VFPDG+K RPSR
Sbjct: 360 QEGQQFDIRGTVEAFRHSINMYMFWKPGMDIHVSHIRRRQIPCYVFPDGFKRSRPSRSTV 419
Query: 241 EQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQ----AFISSEVP 289
+P + S + R K++++ K V+ D +K+ F+ S P
Sbjct: 420 PVENRPKSLQENEVSGTELRGRNIKRKYDDKGVKQDVVLKKHCANPFVESLTP 472
>gi|413926072|gb|AFW66004.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 680
Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/306 (56%), Positives = 208/306 (67%), Gaps = 12/306 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE +LGFS+WDPRKNP+DR+H MPIITPAY CMNSS
Sbjct: 268 MLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPIITPAYPCMNSS 327
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+V+ EQFQ GN++C+EIEL KA W+ALFE + FFEAY +L VDIVA D DD
Sbjct: 328 YNVSTSTLRVIMEQFQFGNKVCQEIELNKANWNALFEPFHFFEAYRKFLVVDIVAEDDDD 387
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGW+ESR RQLTLKIE+DT G+LQCHPYP +Y DP+ C + AF+ GLSRKE G
Sbjct: 388 LRLWKGWIESRLRQLTLKIERDTKGILQCHPYPCEYSDPTIECAHCAFYMGLSRKE-GLK 446
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
K QQFD +GTV F R I Y + + G D+ ++V R +PS+VF GYK P+ H N
Sbjct: 447 KRGQQFDIRGTVDEFMREIGMYSLWKPGMDLAVTHVHREQVPSYVFEQGYKKPCPTMHAN 506
Query: 241 EQSGKPCEDVKMCQSCSSERQLKRKKEHEIK-EVRPDKSVKQAFISSEVPQPVSPGMTTE 299
+Q D S E QLKRK + V KSVK+A +S PG+ T
Sbjct: 507 QQEQS---DGDGTFSPYLESQLKRKYISDGDGHVDLCKSVKRASVS-------PPGVGTP 556
Query: 300 DPTNNS 305
NS
Sbjct: 557 PHLGNS 562
>gi|242061050|ref|XP_002451814.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
gi|241931645|gb|EES04790.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
Length = 672
Score = 327 bits (837), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 165/286 (57%), Positives = 203/286 (70%), Gaps = 5/286 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE +LGFS+WDPRKNP+DR+H MPIITPAY CMNSS
Sbjct: 268 MLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPIITPAYPCMNSS 327
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+V+ EQFQ GN+IC+EIEL KA W+ALFE + FFEAY +L VDIVA + DD
Sbjct: 328 YNVSSSTLRVIMEQFQFGNKICQEIELNKANWNALFEPFHFFEAYRKFLVVDIVAENDDD 387
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGW+ESR RQLTLKI++DT G+LQCHPYP +Y DP+ C + AF+ GLSRKE G+
Sbjct: 388 LRLWKGWIESRLRQLTLKIDRDTKGILQCHPYPCEYSDPTIECAHCAFYMGLSRKE-GSK 446
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
K QQFD +GTV F R I Y + G D+ ++V R +PS+VF GYK P+ H N
Sbjct: 447 KRGQQFDIRGTVDEFMREIGMYSLWMPGMDLAVTHVQREQVPSYVFEQGYKKPCPTMHAN 506
Query: 241 EQSGKPCEDVKMCQSCSSERQLKRKKEHEIK-EVRPDKSVKQAFIS 285
+Q D + S + QLKRK + + V KSVK A +S
Sbjct: 507 QQEQS---DGDVTLSPYLDSQLKRKYDSDGDGHVELHKSVKWASVS 549
>gi|356528904|ref|XP_003533037.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 790
Score = 320 bits (821), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 169/284 (59%), Positives = 208/284 (73%), Gaps = 2/284 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWP PVM+CPIE +LGF VW P KNP+DRSH MPIITPAY CMNSS
Sbjct: 262 MLVSRFFRVYTQWRWPTPVMLCPIEENDLGFPVWHPGKNPRDRSHHMPIITPAYPCMNSS 321
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS+ TL+VM EQFQ GN+IC EIEL K W ALFE Y FFE+Y+NYLQVD+VAADADD
Sbjct: 322 YNVSMSTLRVMMEQFQYGNKICGEIELSKDCWKALFEKYSFFESYKNYLQVDVVAADADD 381
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L +WKGWVESR RQLTL IE+DT G LQCHPY ++++D S+ C + AFF GL RKE
Sbjct: 382 LRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFVDTSRQCAHCAFFMGLHRKEGEVV 441
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD +GTV+ FR ++ Y + G +IY S+V RR +P +VFPDGYK RPSR +
Sbjct: 442 QEGQQFDIRGTVEEFRHSVNMYMFWKPGMEIYVSHVRRRQIPCYVFPDGYKRSRPSRPTS 501
Query: 241 E-QSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAF 283
+ ++ K + ++ + ER KRK + +VR D VK+ +
Sbjct: 502 QFENCKSFHNNEVSVTEHVERIRKRKNNDGV-DVREDAIVKRQY 544
>gi|302804859|ref|XP_002984181.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
gi|300148030|gb|EFJ14691.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
Length = 496
Score = 320 bits (819), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 150/237 (63%), Positives = 183/237 (77%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE G LG SVWDPRKNP+DR+H+MPIITPAY CMNSS
Sbjct: 258 MLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPRDRTHQMPIITPAYPCMNSS 317
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM E+F N ICE IE+ KAEWSALFE Y FF+AY+NYLQ+D+ AAD DD
Sbjct: 318 YNVSSSTLRVMVEEFSRANGICEVIEMNKAEWSALFEPYAFFDAYKNYLQIDVFAADNDD 377
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+ T G+LQCHP+P ++D SK + AFF GL +++ S
Sbjct: 378 LRRWKGWVESRLRQLTLKIEKHTYGMLQCHPHPCDFVDESKEGKHCAFFMGLQKRQGLPS 437
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSR 237
+E QQFD + TV+ FR+ + Y++ +EG DI S+V RR +P++VFP G K RP +
Sbjct: 438 QEGQQFDIRLTVEEFRQSVTGYQLWKEGMDIAVSHVRRRQIPAYVFPGGTKPARPPK 494
>gi|356522230|ref|XP_003529750.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 766
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/319 (54%), Positives = 216/319 (67%), Gaps = 26/319 (8%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWP PVM+CPIE ELGF VW P KNP+DRSH MPIITPAY CMNSS
Sbjct: 262 MLVSRFFRVYTQWRWPTPVMLCPIEENELGFPVWHPGKNPRDRSHHMPIITPAYPCMNSS 321
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM +QFQ GN+IC EIEL +A W ALFE Y FFE+Y+NYLQVD+VAADADD
Sbjct: 322 YNVSTSTLRVMMDQFQYGNKICGEIELSRACWKALFEQYSFFESYKNYLQVDVVAADADD 381
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L +WKGWVESR RQLTL IE+DT G LQCHPY ++++D S+ C + AFF GL RK+
Sbjct: 382 LRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFVDTSRLCAHCAFFMGLQRKQGEVV 441
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E QQFD +GTV+ FR ++ Y + G +IY S+V RR +P +V PDGYK R SR
Sbjct: 442 QEGQQFDIRGTVEEFRHSVNMYMFWKPGMEIYVSHVRRRQIPFYVVPDGYKRSRLSR--- 498
Query: 241 EQSGKPCEDVKMCQSCSSE-------RQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVS 293
P V+ C+S +E +++++K ++ +VR D VK+ Q S
Sbjct: 499 -----PTSQVENCKSFHNEVSGTEHVERIRKRKNNDGVDVRGDAIVKR--------QSAS 545
Query: 294 PGMTTEDPTNNSEVMSSGG 312
P +ED + +GG
Sbjct: 546 P---SEDRLARHSSLGTGG 561
>gi|302780986|ref|XP_002972267.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
gi|300159734|gb|EFJ26353.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
Length = 548
Score = 317 bits (811), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 151/261 (57%), Positives = 190/261 (72%), Gaps = 6/261 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE G LG SVWDPRKNP+DR+H+MPIITPAY CMNSS
Sbjct: 258 MLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPRDRTHQMPIITPAYPCMNSS 317
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM E+F N ICE IE+ KAEWSALFE Y FF+AY+NYLQ+D+ AAD DD
Sbjct: 318 YNVSSSTLRVMVEEFSRANGICEVIEMNKAEWSALFEPYAFFDAYKNYLQIDVFAADNDD 377
Query: 121 LLTWKGWVESRFRQLTLK------IEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSR 174
L WKGWVESR RQLTLK IE+ T G+LQCHP+P ++D SK + AFF GL +
Sbjct: 378 LRRWKGWVESRLRQLTLKVGLDREIEKHTYGMLQCHPHPCDFVDESKEGKHCAFFMGLQK 437
Query: 175 KEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 234
++ S+E QQFD + TV+ FR+ + Y++ +EG DI S+V RR +P++VFP G K R
Sbjct: 438 RQGLPSQEGQQFDIRLTVEEFRQSVTGYQLWKEGMDIAVSHVRRRQIPAYVFPGGTKPAR 497
Query: 235 PSRHFNEQSGKPCEDVKMCQS 255
P + + + + ++ C +
Sbjct: 498 PPKLSSSRKAREAGSIRGCNT 518
>gi|356531174|ref|XP_003534153.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 303 bits (775), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 141/247 (57%), Positives = 185/247 (74%), Gaps = 3/247 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE G LG SVWDPR+NPKDR H MPIITPAY CMNS+
Sbjct: 264 MLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLMPIITPAYPCMNST 323
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y V+ TL+VM+++F+ G+ ICE +E KA+W LFE YPFFE+Y+NYLQ+DI A +ADD
Sbjct: 324 YNVTSSTLRVMSDEFRRGSEICEAMEASKADWDTLFEPYPFFESYKNYLQIDITAENADD 383
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+ T G+LQCHP+P ++ D S+P + +F GL RK+
Sbjct: 384 LRQWKGWVESRLRQLTLKIERHTYGMLQCHPHPGEFSDNSRPF-HHCYFMGLQRKQGVPV 442
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHF- 239
E +QFD + TV+ F+ ++ Y + + G +I+ S+V RR++P+++FP G + PS+
Sbjct: 443 NEGEQFDIRLTVEEFKHSVNAYTLWKPGMNIHVSHVKRRNIPNYIFPGGVRPTFPSKVTA 502
Query: 240 -NEQSGK 245
N+QS K
Sbjct: 503 ENKQSSK 509
>gi|148910690|gb|ABR18412.1| unknown [Picea sitchensis]
Length = 712
Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 143/246 (58%), Positives = 179/246 (72%), Gaps = 2/246 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLV RFFRVYTQWRWPNPVM+C IE G LG VWDPRKNP+DR H+MPIITPAY CMNSS
Sbjct: 264 MLVCRFFRVYTQWRWPNPVMLCAIEEGPLGLPVWDPRKNPRDRLHQMPIITPAYPCMNSS 323
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VMTE+FQ N+ICEE+EL K W+ LFE YPFFEAY+NYL++DI A ADD
Sbjct: 324 YNVSSSTLRVMTEEFQRSNQICEELELNKVCWNILFETYPFFEAYKNYLEIDISAEGADD 383
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGW ESR R LTLKIE+ T G+LQCHP+P+ + DP +P + FF GL RK+
Sbjct: 384 LRKWKGWTESRLRLLTLKIERQTFGMLQCHPHPDDFSDPQRPY-HCCFFMGLQRKQGMPI 442
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E +QFD + TV FR + Y + ++G +I S++ RR++P FVFP G + R ++
Sbjct: 443 QEGEQFDIRVTVDEFRHSVKMYTLWKQGMEINVSHIRRRNIPLFVFPGGVRPPRTTKMLG 502
Query: 241 EQSGKP 246
+G+P
Sbjct: 503 -TAGRP 507
>gi|357500153|ref|XP_003620365.1| Poly(A) polymerase [Medicago truncatula]
gi|355495380|gb|AES76583.1| Poly(A) polymerase [Medicago truncatula]
Length = 752
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 138/237 (58%), Positives = 175/237 (73%), Gaps = 1/237 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE G LG SVWDPR+NP+DR H MPIITPAY CMNS+
Sbjct: 264 MLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPRDRYHLMPIITPAYPCMNST 323
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y V+ TL++M+++F+ G ICE +E KA+W LFE YPFFEAY+NYLQ+DI A + DD
Sbjct: 324 YNVTTSTLRIMSDEFKRGTEICEAMEASKADWDTLFEPYPFFEAYKNYLQIDITAENPDD 383
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+ T G+LQCHPYP ++ D S+ + +F GL RK+
Sbjct: 384 LRQWKGWVESRLRQLTLKIEKYTYGMLQCHPYPGEFSDKSRSF-HQCYFMGLQRKQGVPV 442
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSR 237
E +QFD + TV+ F+ ++ Y + G DI S+V RR++P+F+FP G + PSR
Sbjct: 443 SEGEQFDIRQTVEEFKHNVNAYTAWKPGMDIRVSHVKRRNIPNFIFPGGVRPSVPSR 499
>gi|449439435|ref|XP_004137491.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
gi|449521033|ref|XP_004167536.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 748
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 139/237 (58%), Positives = 174/237 (73%), Gaps = 1/237 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQWRWPNPVM+C E G LG VWDPR+NPKDR H MPIITPAY CMNSS
Sbjct: 264 MLVSRFFRVFTQWRWPNPVMLCANEEGSLGLQVWDPRRNPKDRYHLMPIITPAYPCMNSS 323
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL++MTE+F+ G+ ICE +E K++W LFE YPFFEAY+NYLQ+DI A + DD
Sbjct: 324 YNVSASTLRIMTEEFRRGHDICEVMEENKSDWDTLFEPYPFFEAYKNYLQIDITAENDDD 383
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
+ WKGWVESR RQLTLKIE+ T +LQCHPYP + D S+P + +F GL RK+ G +
Sbjct: 384 IRIWKGWVESRLRQLTLKIERHTYNMLQCHPYPGDFSDKSRPF-HHCYFMGLQRKQGGPA 442
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSR 237
+QFD + TV F+ ++ Y R+ G +IY S+V RR +P+FVFP G + R S+
Sbjct: 443 SGGEQFDIRLTVDEFKHSVNVYTQRKRGMEIYVSHVKRRSIPNFVFPGGVRPSRASK 499
>gi|255567792|ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus communis]
gi|223535837|gb|EEF37498.1| Poly(A) polymerase alpha, putative [Ricinus communis]
Length = 770
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 138/237 (58%), Positives = 178/237 (75%), Gaps = 1/237 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE G LG VWDPR+NPKDR H MPIITPAY MNSS
Sbjct: 266 MLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQVWDPRRNPKDRYHLMPIITPAYPSMNSS 325
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL++M+E+FQ GN ICE +E KA+W+ LFE + FF+AY+NYLQ+DI A + DD
Sbjct: 326 YNVSASTLRIMSEEFQRGNEICEAMEASKADWNTLFESFSFFDAYKNYLQIDIGAENEDD 385
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+ T +LQCHP+P ++ D S+P + ++F GL RK+ +
Sbjct: 386 LRKWKGWVESRLRQLTLKIERHTFNMLQCHPHPGEFTDKSRPL-HCSYFMGLQRKQGVPA 444
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSR 237
E +QFD + TV+ F+ ++ Y + G +I+ ++V RR++PSFVFP G + RPS+
Sbjct: 445 NEGEQFDIRITVEEFKISVNMYTSWKPGMEIHVTHVKRRNIPSFVFPGGIRPSRPSK 501
>gi|357521515|ref|XP_003631046.1| Poly(A) polymerase [Medicago truncatula]
gi|355525068|gb|AET05522.1| Poly(A) polymerase [Medicago truncatula]
Length = 822
Score = 300 bits (767), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 139/237 (58%), Positives = 178/237 (75%), Gaps = 1/237 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C I+ G LG VWDPR+NPKD+ H MPIITPAY CMNSS
Sbjct: 294 MLVSRFFRVYTQWRWPNPVMLCTIKEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSS 353
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VSL TL+VMTE+FQ G+ ICE +E KA+W LFE YPFFE+Y+NYL++DI A + DD
Sbjct: 354 YNVSLSTLRVMTEEFQRGDEICEAMEANKADWDTLFEPYPFFESYKNYLRIDISAENVDD 413
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWV+SR RQLTLKIE++T G+LQCHP+P + D S+P + ++F GL RK+ +
Sbjct: 414 LRNWKGWVKSRLRQLTLKIERNTYGMLQCHPHPGDFSDKSRPL-HCSYFMGLQRKQGVPA 472
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSR 237
E QFD + TV+ F+ ++ Y + G +I S+V RR++P+FVFP G + PS+
Sbjct: 473 NEGGQFDMRLTVEEFKHSVNAYTQWKPGMNISISHVKRRNIPAFVFPGGVRPKCPSK 529
>gi|224135441|ref|XP_002322074.1| predicted protein [Populus trichocarpa]
gi|222869070|gb|EEF06201.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 300 bits (767), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 143/258 (55%), Positives = 185/258 (71%), Gaps = 3/258 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE G LG SVWDPR+NPKDR H MPIITPAY MNSS
Sbjct: 258 MLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLMPIITPAYPSMNSS 317
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL++MTE+FQ GN ICE +E+ KAEW LFE + FFEAY+NYLQ+DI A + DD
Sbjct: 318 YNVSSSTLRIMTEEFQRGNEICEAMEVSKAEWDTLFEPFSFFEAYKNYLQIDISAENEDD 377
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+ T +LQCHP+P ++ D S+P + ++F GL RK+
Sbjct: 378 LRQWKGWVESRLRQLTLKIERHTYNMLQCHPHPGEFSDKSRPL-HCSYFMGLQRKQGVPV 436
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
E +QFD + TV F+ ++ Y + + G +I ++V +R++P+FVFP G + RPS+
Sbjct: 437 NEGEQFDIRITVDEFKNSVNMYTLWKPGMEIRVTHVKKRNIPNFVFPSGVRPSRPSKA-- 494
Query: 241 EQSGKPCEDVKMCQSCSS 258
G+ + K+ + S+
Sbjct: 495 TWDGRRSSEAKVANNSSA 512
>gi|125538688|gb|EAY85083.1| hypothetical protein OsI_06439 [Oryza sativa Indica Group]
Length = 683
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 161/292 (55%), Positives = 201/292 (68%), Gaps = 10/292 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGE-LGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
MLVSRFFRV+TQW+WPNPVM+C IE + LGF+VWDPRKNP+DRSH MPIITPAY CMNS
Sbjct: 270 MLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNS 329
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
SY VS TL+V+ EQFQ GN+IC+EIEL KA WS+LFE + FFEAY YL VDIVA D D
Sbjct: 330 SYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLVVDIVADDDD 389
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGT 179
DL WKGW+ESR RQLTLKIE+DT G+LQCHP P +Y DPS C + AF+ GLSRKE G
Sbjct: 390 DLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKE-GM 448
Query: 180 SKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHF 239
Q+FD +GTV F I Y + G D+ ++VC++ +P +VF G + RP
Sbjct: 449 KIRGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVCKKEIPLYVFEQGCQKTRPPTPI 508
Query: 240 ----NEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPD--KSVKQAFIS 285
+QS K D ++C + +S ++K H + D KSV++A +S
Sbjct: 509 CAEQQDQSDK--NDSEVCTTTASLVGQLKRKYHSVGGADVDSFKSVRRASVS 558
>gi|302774344|ref|XP_002970589.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
gi|300162105|gb|EFJ28719.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
Length = 534
Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 141/256 (55%), Positives = 181/256 (70%), Gaps = 5/256 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIE-MGELGF-SVWDPRKNPKDRSHRMPIITPAYHCMNS 59
L+SRFFRVYTQWRWPNPVM+CPIE LG VWDPRKNP+D+SH MPIITPAY CMNS
Sbjct: 247 LISRFFRVYTQWRWPNPVMLCPIEERSSLGLLQVWDPRKNPRDKSHLMPIITPAYPCMNS 306
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
SY VS TL++MT++F GN +CE++E+ +A W LFE + FFEAY NYLQ+D+VA D
Sbjct: 307 SYNVSTSTLRIMTQEFNRGNEVCEQLEMSRATWDLLFESFSFFEAYRNYLQIDVVAIDDC 366
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGT 179
D WKGWVESR RQLTLK+E+DT G+LQCHP+P+ ++D ++ + A+F GL RK
Sbjct: 367 DHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDMARDGYHCAYFMGLQRKLGAP 426
Query: 180 SKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHF 239
E QQFD + TV+ F+ + Y ++G +IY S+V R+ +P FV+P G K RP+R
Sbjct: 427 LHEGQQFDIRTTVEQFKLNVAAYTSWKQGMEIYVSHVRRKQIPLFVYPGGVKPARPAR-- 484
Query: 240 NEQSGKPCEDVKMCQS 255
+ SG P D K S
Sbjct: 485 -QHSGSPSSDSKQGDS 499
>gi|356522834|ref|XP_003530048.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 296 bits (758), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 138/247 (55%), Positives = 181/247 (73%), Gaps = 3/247 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE G LG VWDPR+NPKDR H MPIITP Y CMNS+
Sbjct: 264 MLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLPVWDPRRNPKDRYHLMPIITPVYPCMNST 323
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y V+ TL+VM+++F+ G+ ICE +E KA+W LFE YPFFE+Y+NYLQ+DI A +ADD
Sbjct: 324 YNVTSSTLRVMSDEFRRGSEICEAMEASKADWDTLFEPYPFFESYKNYLQIDITAENADD 383
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWV SR RQLTLKIE+ T G+LQCHP+P ++ D S+P + +F GL RK+
Sbjct: 384 LRQWKGWVGSRLRQLTLKIERHTYGMLQCHPHPGEFSDNSRPF-HHCYFMGLQRKQGVPV 442
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHF- 239
E +QFD + TV+ F+ ++ Y + + G DI+ S+V R ++P+++FP G + PS+
Sbjct: 443 NEGEQFDIRLTVEEFKHSVNAYTLWKPGMDIHVSHVKRSNIPNYIFPGGVRPTFPSKVTA 502
Query: 240 -NEQSGK 245
N+QS K
Sbjct: 503 ENKQSSK 509
>gi|302770018|ref|XP_002968428.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
gi|300164072|gb|EFJ30682.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
Length = 534
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 142/256 (55%), Positives = 180/256 (70%), Gaps = 5/256 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIE-MGELGF-SVWDPRKNPKDRSHRMPIITPAYHCMNS 59
LVSRFFRVYTQWRWPNPVM+CPIE LG VWDPRKNP+D+SH MPIITPAY CMNS
Sbjct: 247 LVSRFFRVYTQWRWPNPVMLCPIEERSSLGLLQVWDPRKNPRDKSHLMPIITPAYPCMNS 306
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
SY VS TL++MT++F GN +CE++E+ +A W LFE + FFEAY NYLQ+D+VA D
Sbjct: 307 SYNVSTSTLRIMTQEFNRGNEVCEQLEMSRATWDLLFESFSFFEAYRNYLQIDVVAIDDC 366
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGT 179
D WKGWVESR RQLTLK+E+DT G+LQCHP+P+ ++D ++ + A+F GL RK
Sbjct: 367 DHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDMARDGYHCAYFMGLQRKLGAP 426
Query: 180 SKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHF 239
E QQFD + TV+ F+ + Y + G +IY S+V R+ +P FV+P G K RP+R
Sbjct: 427 LHEGQQFDIRTTVEQFKLNVAAYTSWKPGMEIYVSHVRRKQIPLFVYPGGVKPARPAR-- 484
Query: 240 NEQSGKPCEDVKMCQS 255
+ SG P D K S
Sbjct: 485 -QHSGSPSSDSKQGDS 499
>gi|359490984|ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 757
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/271 (53%), Positives = 189/271 (69%), Gaps = 4/271 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE G LG VWDPRK PKDR H MPIITPAY CMNSS
Sbjct: 264 MLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSS 323
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL++M+E+F+ GN I E +E KA+W+ L E YPFFEAY+NYLQ++I A +ADD
Sbjct: 324 YNVSSSTLRIMSEEFKRGNEISEVMEANKADWATLCEPYPFFEAYKNYLQIEIAAENADD 383
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+ T +LQCHP+P + D S+P + +F GL RK+ +
Sbjct: 384 LRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPF-HCCYFMGLQRKQGVPA 442
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
E +QFD + TV F+ + Y + + G +I+ +V RR++P+FVFP G + RP++ +
Sbjct: 443 SEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPGGVRPSRPTKVAS 502
Query: 241 EQSGKPCEDVKMCQSC--SSERQLKRKKEHE 269
E+ + E Q+ +E KRK+E E
Sbjct: 503 ERR-RVLEPNVSTQAVLEGAEDSKKRKREDE 532
>gi|147795652|emb|CAN61208.1| hypothetical protein VITISV_015447 [Vitis vinifera]
Length = 1097
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/271 (53%), Positives = 188/271 (69%), Gaps = 4/271 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE G LG VWDPRK PKDR H MPIITPAY CMNSS
Sbjct: 444 MLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSS 503
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL++M+E+F+ GN I E +E KA+W L E YPFFEAY+NYLQ++I A +ADD
Sbjct: 504 YNVSSSTLRIMSEEFKRGNEISEVMEANKADWXTLCEPYPFFEAYKNYLQIEIAAENADD 563
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+ T +LQCHP+P + D S+P + +F GL RK+ +
Sbjct: 564 LRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPF-HCCYFMGLQRKQGVPA 622
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
E +QFD + TV F+ + Y + + G +I+ +V RR++P+FVFP G + RP++ +
Sbjct: 623 SEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPGGVRPSRPTKVAS 682
Query: 241 EQSGKPCEDVKMCQSC--SSERQLKRKKEHE 269
E+ + E Q+ +E KRK+E E
Sbjct: 683 ERR-RVLEPNVSTQAVLEGAEDSKKRKREDE 712
>gi|49388677|dbj|BAD25861.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
gi|125581374|gb|EAZ22305.1| hypothetical protein OsJ_05959 [Oryza sativa Japonica Group]
Length = 610
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 160/292 (54%), Positives = 200/292 (68%), Gaps = 10/292 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGE-LGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
MLVSRFFRV+TQW+WPNPVM+C IE + LGF+VWDPRKNP+DRSH MPIITPAY CMNS
Sbjct: 271 MLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNS 330
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
SY VS TL+V+ EQFQ GN+IC+EIEL KA WS+LFE + FFEAY YL VDIVA D D
Sbjct: 331 SYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLVVDIVADDDD 390
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGT 179
DL WKGW+ESR RQLTLKIE+DT G+LQCHP P +Y DPS C + AF+ GLSRKE G
Sbjct: 391 DLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKE-GM 449
Query: 180 SKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHF 239
Q+FD +GTV F I Y + G D+ ++V ++ +P +VF G + RP
Sbjct: 450 KIRGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTRPPTPI 509
Query: 240 ----NEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPD--KSVKQAFIS 285
+QS K D ++C + +S ++K H + D KSV++A +S
Sbjct: 510 CAEQQDQSDK--NDSEVCTTTASLVGQLKRKYHSVGGADVDSFKSVRRASVS 559
>gi|297598868|ref|NP_001046352.2| Os02g0227400 [Oryza sativa Japonica Group]
gi|255670737|dbj|BAF08266.2| Os02g0227400, partial [Oryza sativa Japonica Group]
Length = 602
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 160/292 (54%), Positives = 200/292 (68%), Gaps = 10/292 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGE-LGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
MLVSRFFRV+TQW+WPNPVM+C IE + LGF+VWDPRKNP+DRSH MPIITPAY CMNS
Sbjct: 263 MLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNS 322
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
SY VS TL+V+ EQFQ GN+IC+EIEL KA WS+LFE + FFEAY YL VDIVA D D
Sbjct: 323 SYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLVVDIVADDDD 382
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGT 179
DL WKGW+ESR RQLTLKIE+DT G+LQCHP P +Y DPS C + AF+ GLSRKE G
Sbjct: 383 DLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKE-GM 441
Query: 180 SKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHF 239
Q+FD +GTV F I Y + G D+ ++V ++ +P +VF G + RP
Sbjct: 442 KIRGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTRPPTPI 501
Query: 240 ----NEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPD--KSVKQAFIS 285
+QS K D ++C + +S ++K H + D KSV++A +S
Sbjct: 502 CAEQQDQSDK--NDSEVCTTTASLVGQLKRKYHSVGGADVDSFKSVRRASVS 551
>gi|58220773|gb|AAW68018.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 652
Score = 290 bits (743), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/292 (55%), Positives = 202/292 (69%), Gaps = 10/292 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGE-LGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
MLVSRFFRV+TQW+WPNPVM+C IE + LGF+VWDPRKNP+DRSH MPIITPAY CMNS
Sbjct: 239 MLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNS 298
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
SY VS TL+V+ EQFQ GN+IC+EIEL KA WS+LFE + FFEAY YL VDIVA D D
Sbjct: 299 SYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLVVDIVADDDD 358
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGT 179
DL WKGW+ESR RQLTLKIE+DT G+LQCHP P +Y DPS C + AF+ GLSRKE G
Sbjct: 359 DLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKE-GM 417
Query: 180 SKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHF 239
Q+FD +GTV F I Y + G D+ ++V ++ +P +VF G + RP
Sbjct: 418 KIRGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTRPPTPI 477
Query: 240 ----NEQSGKPCEDVKMCQSCSS-ERQLKRKKEH-EIKEVRPDKSVKQAFIS 285
++SGK D ++C + S QLKRK + +V KSV++A +S
Sbjct: 478 CAEQQDRSGK--NDSEVCTTTVSLVGQLKRKYDSVGGADVDSFKSVRRASVS 527
>gi|297734259|emb|CBI15506.3| unnamed protein product [Vitis vinifera]
Length = 651
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 136/232 (58%), Positives = 171/232 (73%), Gaps = 1/232 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQWRWPNPVM+C IE G LG VWDPRK PKDR H MPIITPAY CMNSS
Sbjct: 264 MLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPIITPAYPCMNSS 323
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL++M+E+F+ GN I E +E KA+W+ L E YPFFEAY+NYLQ++I A +ADD
Sbjct: 324 YNVSSSTLRIMSEEFKRGNEISEVMEANKADWATLCEPYPFFEAYKNYLQIEIAAENADD 383
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+ T +LQCHP+P + D S+P + +F GL RK+ +
Sbjct: 384 LRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPF-HCCYFMGLQRKQGVPA 442
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKW 232
E +QFD + TV F+ + Y + + G +I+ +V RR++P+FVFP GY +
Sbjct: 443 SEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPGGYGY 494
>gi|242096166|ref|XP_002438573.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
gi|241916796|gb|EER89940.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
Length = 468
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 130/176 (73%), Positives = 149/176 (84%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE E+GF VWDPRKNP+DR H MPIITPAY CMNSS
Sbjct: 259 MLVSRFFRVFTQWQWPNPVMLCSIEEDEVGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+VM EQFQ GN+IC+EIE+ KA WSALFE + FFEAY+NYLQVDI+A D +D
Sbjct: 319 YNVSTSTLRVMVEQFQFGNKICQEIEMNKASWSALFEPFQFFEAYKNYLQVDIIAEDDED 378
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 176
L WKGWVESR RQLTLKIE+DT G+LQCHPYP++Y DPS+ C + AFF GLSRKE
Sbjct: 379 LRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKE 434
>gi|297850192|ref|XP_002892977.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297338819|gb|EFH69236.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 716
Score = 283 bits (724), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 129/231 (55%), Positives = 168/231 (72%), Gaps = 1/231 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML SRFFRVY QWRWPNPV++C ++ G G VWDPR+NPKDR H MPIITPAY CMNSS
Sbjct: 259 MLASRFFRVYNQWRWPNPVLLCSMDEGSFGLQVWDPRRNPKDRLHIMPIITPAYPCMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL++MT +FQ G ICE +E KA+W LFE + FFEAY+NYLQ+DI AA+ +D
Sbjct: 319 YNVSASTLRIMTGEFQRGKEICEAMEANKADWDTLFEPFAFFEAYKNYLQIDISAANVND 378
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+ T +LQCHP+P+ + D S+P + ++F GL RK+ +
Sbjct: 379 LRKWKGWVESRLRQLTLKIERHTYDMLQCHPHPHDFQDASRPL-HCSYFMGLQRKQGVPA 437
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYK 231
E +QFD + TV+ F+ ++ Y + G +I S++ RR LP++VFP G +
Sbjct: 438 AEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVSHIKRRSLPNYVFPGGVR 488
>gi|414872023|tpg|DAA50580.1| TPA: hypothetical protein ZEAMMB73_982818 [Zea mays]
Length = 745
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 187/286 (65%), Gaps = 12/286 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML+SRFFRVY++W+WPNPVM+C IE G LG VWDPR+N +DR H+MPIITPAY CMNSS
Sbjct: 259 MLISRFFRVYSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYRDRGHQMPIITPAYPCMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS+ T VM ++F IC+ I+ GKA+W ALFE YPFFE+Y+NYL+V+I A + DD
Sbjct: 319 YNVSVSTRYVMVQEFTQAFEICQAIDEGKADWDALFEPYPFFESYKNYLEVNITARNEDD 378
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR R L LKIE+ ++ ++ HPYP + D S+P + +F GL RK+ +
Sbjct: 379 LRNWKGWVESRLRTLVLKIERYSHEMILAHPYPKDFSDKSRPL-HIFYFMGLWRKQTTQA 437
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E +QFD +G V F+ I Y+ R+EG DI S+V R+ +P FVFP G + R SR +
Sbjct: 438 QETEQFDIRGIVNEFKNTICAYQHRKEGMDIEVSHVKRKEIPLFVFPGGVRPSRTSRTTH 497
Query: 241 EQS-GKPCEDVKM---------CQSCSSERQLKRKKEHEIKEVRPD 276
+ S P DV SCS + + K + +K+ PD
Sbjct: 498 KNSRAIPTRDVSADDQVGNLLGVASCSDAQHVPCKGSY-MKQPEPD 542
>gi|242038623|ref|XP_002466706.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
gi|241920560|gb|EER93704.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
Length = 750
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 138/286 (48%), Positives = 190/286 (66%), Gaps = 12/286 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML+SRFFRVY++W+WPNPVM+C IE G LG VWDPR+N +DR H+MPIITPAY CMNSS
Sbjct: 259 MLISRFFRVYSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYRDRGHQMPIITPAYPCMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS+ T VMT++F IC+ I+ GKA+W ALFE YPFFE+Y+NYL+V+I A + D+
Sbjct: 319 YNVSVSTRYVMTQEFTRAFEICQAIDEGKADWDALFEPYPFFESYKNYLEVNITARNEDE 378
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L +WKGWVESR R L LKIE+ ++ ++ HPYP + D S+P + +F GL RK+ +
Sbjct: 379 LRSWKGWVESRLRTLVLKIERYSHEMILAHPYPKDFSDKSRPL-HCFYFMGLWRKQTTQT 437
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSR--H 238
+E +QFD +G V F+ I Y+ +EG DI S+V R+ +P FVFP G + R SR H
Sbjct: 438 QEAEQFDIRGIVNEFKNTICAYQQWKEGMDIEVSHVKRKEIPLFVFPGGVRPSRSSRTAH 497
Query: 239 FNEQSGKPCE--------DVKMCQSCSSERQLKRKKEHEIKEVRPD 276
N ++ C+ ++ SCS + + K + +K+ PD
Sbjct: 498 KNSRTVPTCDVSADDQVGNLLGVASCSDAQPVSCKGSY-MKQPEPD 542
>gi|167998971|ref|XP_001752191.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696586|gb|EDQ82924.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 553
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 131/255 (51%), Positives = 173/255 (67%), Gaps = 1/255 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+L+SRFFRVY QWRWPNPVM+C IE G LG VWDPR+NP+DRSH MPIITP Y C NSS
Sbjct: 255 VLLSRFFRVYKQWRWPNPVMLCAIEEGPLGLPVWDPRRNPRDRSHLMPIITPTYPCQNSS 314
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ VS TL+VMTE+F+ G+ IC+ ++ A+WS LFE YPFFE+Y+NYLQ+DI A D +D
Sbjct: 315 FNVSNSTLRVMTEEFKRGDSICDSLDSKVADWSKLFEPYPFFESYKNYLQIDISAGDEED 374
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQL LK+E+DT G LQCHP+P+ + D SK +FF L RK+ G
Sbjct: 375 LRIWKGWVESRLRQLILKVEKDTFGALQCHPHPSAFHDTSKRVQVCSFFVALQRKQ-GAP 433
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
FD T+ F+ ++ Y + + I+ S+V + +P++VFP+G + RP R
Sbjct: 434 PSSTPFDMCHTIAEFKHSVNQYLLWKPTMKIHVSHVRPKQIPTYVFPNGIRPVRPPRPTI 493
Query: 241 EQSGKPCEDVKMCQS 255
+ G ++V QS
Sbjct: 494 HKPGTNPDNVPTSQS 508
>gi|359484334|ref|XP_002280350.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
gi|297738746|emb|CBI27991.3| unnamed protein product [Vitis vinifera]
Length = 598
Score = 273 bits (698), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 137/247 (55%), Positives = 169/247 (68%), Gaps = 10/247 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQW WPNPVM+CPIE ELGF VWDPR+NP DR+H MPIITPAY MNSS
Sbjct: 259 MLVSRFFRVYTQWHWPNPVMLCPIEDKELGFPVWDPRRNPLDRNHHMPIITPAYPNMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL+ M +QF N+IC +IEL K+ W ALFE + FF +Y+NYLQVDI A DADD
Sbjct: 319 YSVSTSTLEAMMKQFHTANKICNDIELNKSSWGALFEPFLFFRSYQNYLQVDITATDADD 378
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK---EV 177
L WKGWVESR RQLTLK+E+ T G L C P P +Y+D S+ C + +F GL +K EV
Sbjct: 379 LRAWKGWVESRLRQLTLKVERCTIGKLLCVPCPREYVDTSRQCCHCTYFMGLRKKPGVEV 438
Query: 178 GTSKECQQFDFQGTVKNFRRGIDN-YRVRREGRDIYFSYVCRRHLPSFVFPDGY-KWHRP 235
G + D + + F+ I N + G +I+ S+V + LPS+VFPD Y K +
Sbjct: 439 G-----EVIDIRVATQEFKEEIVNMFSFWTPGMEIHVSHVLKNQLPSYVFPDEYRKRSQS 493
Query: 236 SRHFNEQ 242
S+ N+Q
Sbjct: 494 SKSINQQ 500
>gi|168067163|ref|XP_001785494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662901|gb|EDQ49701.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 494
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/237 (53%), Positives = 166/237 (70%), Gaps = 1/237 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+L+SRFFRVY QWRWPNPVM+C IE G LG +WDPRKNP+DRSH MPIITP Y C NSS
Sbjct: 259 VLLSRFFRVYKQWRWPNPVMLCAIEEGSLGLPIWDPRKNPRDRSHLMPIITPTYPCQNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ VS TL+VMTE+F+ G+ +C+ ++ A+WS LFE YPFFE+Y+NYLQ++I A D +D
Sbjct: 319 FNVSNSTLRVMTEEFKRGDGVCDSLDSKVADWSKLFEPYPFFESYKNYLQIEITAGDEED 378
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQL LK+E+DT G+LQCHP+PN + D SK +FF L RK+ G
Sbjct: 379 LRIWKGWVESRLRQLILKVEKDTFGMLQCHPHPNAFHDTSKKVQVCSFFVALQRKQ-GAQ 437
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSR 237
FD T+ F+ ++ Y + + I S+V + +P++VFP+G + RP R
Sbjct: 438 HSSTPFDMCHTIAEFKHSVNQYLLWKPTMKIGVSHVRPKQIPTYVFPNGIRPVRPPR 494
>gi|224088990|ref|XP_002308592.1| predicted protein [Populus trichocarpa]
gi|222854568|gb|EEE92115.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/266 (54%), Positives = 176/266 (66%), Gaps = 29/266 (10%)
Query: 84 EIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDT 143
+IEL K +WSALFE Y FFEAY+NYLQVDIVAADA DLL WKGWVESR RQLTLKIE+DT
Sbjct: 210 KIELNKEQWSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLTLKIERDT 269
Query: 144 NGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYR 203
+G+LQCHPYPN+YIDPSK C + AFF GL RKE T +E QQFD +GTV FR+ I+ Y
Sbjct: 270 DGMLQCHPYPNEYIDPSKQCAHCAFFMGLQRKEGVTGQEGQQFDIRGTVDEFRQDINMYL 329
Query: 204 VRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLK 263
+ G DIY S+V RR LP FVFPDGYK RPSRH N+Q+ + EDV QS S+ER +K
Sbjct: 330 PWKPGMDIYVSHVRRRQLPGFVFPDGYKRSRPSRHVNQQTNRTSEDVARSQSGSAERHVK 389
Query: 264 RKKEHEIKEVRPDKSVKQAFISSEVPQPVSP-------GMTT------------------ 298
RK + E+ +++P K K+A S + Q VSP GMT+
Sbjct: 390 RKNDCEMADLKPVKPEKRASTSPQRLQSVSPSSSAGRSGMTSLASSCEGVILGCSTIGDI 449
Query: 299 ----EDPTNNSEVMSSGGHLVSEKGE 320
ED +NSEV S+ L SEK +
Sbjct: 450 VSNCEDVASNSEVRSTSWQLESEKSD 475
>gi|222635475|gb|EEE65607.1| hypothetical protein OsJ_21148 [Oryza sativa Japonica Group]
Length = 748
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 125/243 (51%), Positives = 169/243 (69%), Gaps = 1/243 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML+SRFF+VY++W+WPNPVM+C IE G LG VWDPR+N +DR H MPIITPAY MNSS
Sbjct: 259 MLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPAYPSMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS+ T VM ++F + IC+ I+ KA+W ALFE YPFFE+Y NYL+++I A + DD
Sbjct: 319 YNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFFESYRNYLKIEITARNEDD 378
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR R L LKIE+ T +L HP P +ID S+P + +F GL +K++ +
Sbjct: 379 LRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL-HCFYFMGLWKKQISQA 437
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E +Q+D + V F+ I Y+ REG +I S+V R+ +PSFVFP G + RPSR
Sbjct: 438 QEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGGIRPSRPSRTVG 497
Query: 241 EQS 243
+++
Sbjct: 498 KEA 500
>gi|297605720|ref|NP_001057507.2| Os06g0319600 [Oryza sativa Japonica Group]
gi|255676996|dbj|BAF19421.2| Os06g0319600, partial [Oryza sativa Japonica Group]
Length = 769
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 125/243 (51%), Positives = 169/243 (69%), Gaps = 1/243 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML+SRFF+VY++W+WPNPVM+C IE G LG VWDPR+N +DR H MPIITPAY MNSS
Sbjct: 280 MLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPAYPSMNSS 339
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS+ T VM ++F + IC+ I+ KA+W ALFE YPFFE+Y NYL+++I A + DD
Sbjct: 340 YNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFFESYRNYLKIEITARNEDD 399
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR R L LKIE+ T +L HP P +ID S+P + +F GL +K++ +
Sbjct: 400 LRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL-HCFYFMGLWKKQISQA 458
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E +Q+D + V F+ I Y+ REG +I S+V R+ +PSFVFP G + RPSR
Sbjct: 459 QEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGGIRPSRPSRTVG 518
Query: 241 EQS 243
+++
Sbjct: 519 KEA 521
>gi|218198073|gb|EEC80500.1| hypothetical protein OsI_22746 [Oryza sativa Indica Group]
Length = 748
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 125/243 (51%), Positives = 169/243 (69%), Gaps = 1/243 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML+SRFF+VY++W+WPNPVM+C IE G LG VWDPR+N +DR H MPIITPAY MNSS
Sbjct: 259 MLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPAYPSMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS+ T VM ++F + IC+ I+ KA+W ALFE YPFFE+Y NYL+++I A + DD
Sbjct: 319 YNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFFESYRNYLKIEITARNEDD 378
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR R L LKIE+ T +L HP P +ID S+P + +F GL +K++ +
Sbjct: 379 LRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL-HCFYFMGLWKKQISQA 437
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E +Q+D + V F+ I Y+ REG +I S+V R+ +PSFVFP G + RPSR
Sbjct: 438 QEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGGIRPSRPSRTVG 497
Query: 241 EQS 243
+++
Sbjct: 498 KEA 500
>gi|326517509|dbj|BAK03673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 128/237 (54%), Positives = 160/237 (67%), Gaps = 1/237 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML+SRFFRVY+QW+WPNPV +C IE G LG VWDPR+N +DR H+MPIITPAY CMNSS
Sbjct: 257 MLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFRDRGHQMPIITPAYPCMNSS 316
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS T VM ++F G IC+ I+ +A W LFE YPFFE Y+NYL+V I A DD
Sbjct: 317 YNVSTSTRYVMIQEFTRGYEICQAIDENRATWDDLFEPYPFFELYKNYLEVGITARSEDD 376
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR R L LK E+ T+ +L HP+P + D S+P +S +F GL RK+
Sbjct: 377 LRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDFSDGSRPL-HSFYFMGLWRKQTAQP 435
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSR 237
+E +QFD +G V F+ + Y RREG DI S+V R+ +P FVFP G + R SR
Sbjct: 436 QEAEQFDIRGIVNEFKSAVLAYAHRREGMDIEVSHVKRKDIPLFVFPGGVRPPRSSR 492
>gi|58220769|gb|AAW68016.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 748
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/243 (50%), Positives = 168/243 (69%), Gaps = 1/243 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML+SRFF+VY++W+WPNPVM+C IE G LG VWDPR+N +DR H MPIITPAY MNSS
Sbjct: 259 MLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPIITPAYPSMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS+ T VM ++F + IC+ I+ +A+W ALFE YPFFE+Y NYL+++I A + DD
Sbjct: 319 YNVSISTRHVMVQEFTRASDICQAIDEREADWDALFEPYPFFESYRNYLKIEITARNEDD 378
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR R L LKIE+ T +L HP P +ID S+P + +F GL +K++ +
Sbjct: 379 LRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPL-HCFYFMGLWKKQISQA 437
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFN 240
+E +Q+D + V F+ I Y+ REG +I S+V R+ +PSFVFP + RPSR
Sbjct: 438 QEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGRIRPSRPSRTVG 497
Query: 241 EQS 243
+++
Sbjct: 498 KEA 500
>gi|297737752|emb|CBI26953.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/241 (53%), Positives = 167/241 (69%), Gaps = 1/241 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LVSRFFRVYTQWRWPNPVM+CPIE LG VWDPR+N KDR+H MPIITPAY MNSSY
Sbjct: 264 LVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIKDRNHLMPIITPAYPSMNSSY 323
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS TL++M E+ Q GN I +E+E W LFE + FFEAY+NYLQ+DI A + DL
Sbjct: 324 NVSWSTLRIMEEELQRGNEIVKEMETENTGWITLFEPFLFFEAYKNYLQIDITAENDVDL 383
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTSK 181
WKGWVESR R LT KIE+DT G+LQCHP+P ++ D S+ + +F GL RKE ++
Sbjct: 384 RNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTSRSF-HYCYFMGLRRKEGSAAQ 442
Query: 182 ECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFNE 241
E +QFD + TV +F+ + Y + G I+ ++ R+++P+FVFP G + +P + E
Sbjct: 443 EGEQFDIRLTVDDFKNTVWMYSSWKRGMWIHVCHIRRKNIPNFVFPGGVRPPQPMKVAGE 502
Query: 242 Q 242
Q
Sbjct: 503 Q 503
>gi|42562141|ref|NP_173240.2| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|9665075|gb|AAF97277.1|AC034106_20 Strong similarity to nuclear poly(A) polymerase from Arabidopsis
thaliana gb|AF255297 and contains a
Nucleotidyltransferase PF|01909 domain. ESTs
gb|AV536592, gb|AV553256, gb|AV561630, gb|AV532289 come
from this gene [Arabidopsis thaliana]
gi|29029092|gb|AAO64925.1| At1g17980 [Arabidopsis thaliana]
gi|32527642|gb|AAP86214.1| poly(A) polymerase [Arabidopsis thaliana]
gi|110743114|dbj|BAE99449.1| hypothetical protein [Arabidopsis thaliana]
gi|332191538|gb|AEE29659.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 713
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 125/231 (54%), Positives = 162/231 (70%), Gaps = 2/231 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+LVSRFFRV+ QW WPN + +C + G LG VWDPR NPKDR H MPIITPAY CMNSS
Sbjct: 259 ILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPIITPAYPCMNSS 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL++M +FQ GN ICE +E KA+W LFE + FFEAY+NYLQ+DI AA+ DD
Sbjct: 319 YNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAFFEAYKNYLQIDISAANVDD 378
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+ +L CHP+P+ + D S+P + ++F GL RK+ +
Sbjct: 379 LRKWKGWVESRLRQLTLKIERHFK-MLHCHPHPHDFQDTSRPL-HCSYFMGLQRKQGVPA 436
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYK 231
E +QFD + TV+ F+ ++ Y + G +I ++ RR LP+FVFP G +
Sbjct: 437 AEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNFVFPGGVR 487
>gi|359472651|ref|XP_002280091.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 587
Score = 264 bits (674), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 129/242 (53%), Positives = 167/242 (69%), Gaps = 1/242 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LVSRFFRVYTQWRWPNPVM+CPIE LG VWDPR+N KDR+H MPIITPAY MNSSY
Sbjct: 264 LVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIKDRNHLMPIITPAYPSMNSSY 323
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS TL++M E+ Q GN I +E+E W LFE + FFEAY+NYLQ+DI A + DL
Sbjct: 324 NVSWSTLRIMEEELQRGNEIVKEMETENTGWITLFEPFLFFEAYKNYLQIDITAENDVDL 383
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTSK 181
WKGWVESR R LT KIE+DT G+LQCHP+P ++ D S+ + +F GL RKE ++
Sbjct: 384 RNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTSRSF-HYCYFMGLRRKEGSAAQ 442
Query: 182 ECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFNE 241
E +QFD + TV +F+ + Y + G I+ ++ R+++P+FVFP G + +P + E
Sbjct: 443 EGEQFDIRLTVDDFKNTVWMYSSWKRGMWIHVCHIRRKNIPNFVFPGGVRPPQPMKVAGE 502
Query: 242 QS 243
Q
Sbjct: 503 QG 504
>gi|42571529|ref|NP_973855.1| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|332191537|gb|AEE29658.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 586
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 125/231 (54%), Positives = 162/231 (70%), Gaps = 2/231 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+LVSRFFRV+ QW WPN + +C + G LG VWDPR NPKDR H MPIITPAY CMNSS
Sbjct: 132 ILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPIITPAYPCMNSS 191
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL++M +FQ GN ICE +E KA+W LFE + FFEAY+NYLQ+DI AA+ DD
Sbjct: 192 YNVSESTLRIMKGEFQRGNEICEAMESNKADWDTLFEPFAFFEAYKNYLQIDISAANVDD 251
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR RQLTLKIE+ +L CHP+P+ + D S+P + ++F GL RK+ +
Sbjct: 252 LRKWKGWVESRLRQLTLKIERHFK-MLHCHPHPHDFQDTSRPL-HCSYFMGLQRKQGVPA 309
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYK 231
E +QFD + TV+ F+ ++ Y + G +I ++ RR LP+FVFP G +
Sbjct: 310 AEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNFVFPGGVR 360
>gi|357138719|ref|XP_003570937.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 760
Score = 263 bits (672), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 127/237 (53%), Positives = 160/237 (67%), Gaps = 1/237 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML+SRFFRVY+QW+WPNPV +C IE G LG VWDPR+N +DR H+MPIITPAY CMNSS
Sbjct: 278 MLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFRDRGHQMPIITPAYPCMNSS 337
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS+ T VM ++F G IC+ I+ +A W LFE YPFFE Y NYL+V I A + DD
Sbjct: 338 YNVSVSTRYVMVQEFTRGYEICQAIDENRATWDDLFEPYPFFELYRNYLEVVISARNEDD 397
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L WKGWVESR R L LK E+ T+ +L HP+P + D S+P +S +F GL RK+
Sbjct: 398 LRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDFSDGSRPL-HSFYFMGLWRKQTVQP 456
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSR 237
+E +QFD +G V F+ + Y R EG DI S+V R+ +P FVFP G + R SR
Sbjct: 457 QEAEQFDIRGIVNEFKSSVCAYAHRGEGMDIEVSHVKRKDIPLFVFPGGVRPPRSSR 513
>gi|356511273|ref|XP_003524351.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Glycine
max]
Length = 702
Score = 253 bits (646), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 139/316 (43%), Positives = 189/316 (59%), Gaps = 12/316 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRVYTQW WPNPVM+C IE G +G +WDPR+ P DR H MPIITPAY CMNSS
Sbjct: 260 MLVSRFFRVYTQWCWPNPVMLCAIEEGSVGLQIWDPRRYPNDRFHLMPIITPAYACMNSS 319
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL +MTE+FQ GN ICE W A +P +Y+NYLQ+DI +ADD
Sbjct: 320 YNVSSITLCIMTEEFQRGNEICEYFAQDDLTW-AFKLKFPCSNSYKNYLQIDISGENADD 378
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKP--CPNSAFFWGLSRKEVG 178
L WKGWVES RQL L+IE+ G+LQCHP+P D S+P C N F L RK+
Sbjct: 379 LRKWKGWVESHLRQLRLQIERHIYGMLQCHPHPGDSSDKSRPFHCSN---FMALQRKQGV 435
Query: 179 TSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRH 238
+ QFD + TV+ F+ ++ Y + G D++ +V R++P+FVFP + PS+
Sbjct: 436 PVNDGGQFDIRLTVEEFKHSVNIYTLWIPGMDVHVPHVKHRNIPTFVFPGSVRPSHPSKV 495
Query: 239 FNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS----EVPQPVSP 294
E K ++ KM +++ + +++ E + +R KS+ SS E P+SP
Sbjct: 496 TWEI--KKSQEGKMAVLGANDDRKRKQAEDSVDSLRNSKSMASLPPSSREVHEDENPISP 553
Query: 295 GMTTEDPTNNSEVMSS 310
+ +N+SE+ S+
Sbjct: 554 ASSCFVKSNDSEINST 569
>gi|218195447|gb|EEC77874.1| hypothetical protein OsI_17161 [Oryza sativa Indica Group]
Length = 556
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/241 (45%), Positives = 152/241 (63%), Gaps = 15/241 (6%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEM--GELGFS--VWDPRKNPKDRSHRMPIITPAYHC 56
ML+ RFFRV+ +W+WP+PVM+ IE GELG S VWDPR+NP+D+ H MPI+TPAY C
Sbjct: 257 MLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNPRDKIHLMPIVTPAYPC 316
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEI---ELGKAEWSALFEHYPFFEAYENYLQVD- 112
MNS Y VS TL+V+TEQ G+ +C+EI G W LF+ + FF AY++YLQVD
Sbjct: 317 MNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQPFNFFGAYKSYLQVDV 376
Query: 113 -IVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYI-----DPSKPCPNS 166
+ + DDL WKGWVESR R L+ ++E DT+G+L CH +P Y +P + S
Sbjct: 377 TVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPYAAEPHNEPRRRRRTS 436
Query: 167 AFFWGLSRKEVGTSKECQQ-FDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 225
+FF GLS+ ++ Q FD + T + F+ + Y R G ++ ++V R+ LPS+V
Sbjct: 437 SFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGMEVAVAHVRRKDLPSYV 496
Query: 226 F 226
Sbjct: 497 L 497
>gi|222629442|gb|EEE61574.1| hypothetical protein OsJ_15948 [Oryza sativa Japonica Group]
Length = 556
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/241 (45%), Positives = 152/241 (63%), Gaps = 15/241 (6%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEM--GELGFS--VWDPRKNPKDRSHRMPIITPAYHC 56
ML+ RFFRV+ +W+WP+PVM+ IE GELG S VWDPR+NP+D+ H MPI+TPAY C
Sbjct: 257 MLLPRFFRVFARWKWPSPVMLRAIEHNDGELGLSLPVWDPRRNPRDKIHLMPIVTPAYPC 316
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEI---ELGKAEWSALFEHYPFFEAYENYLQVD- 112
MNS Y VS TL+V+TEQ G+ +C+EI G W LF+ + FF AY++YLQVD
Sbjct: 317 MNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQPFNFFGAYKSYLQVDV 376
Query: 113 -IVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYI-----DPSKPCPNS 166
+ + DDL WKGWVESR R L+ ++E DT+G+L CH +P Y +P + S
Sbjct: 377 TVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPYAAEPHNEPRRRRRTS 436
Query: 167 AFFWGLSRKEVGTSKECQQ-FDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 225
+FF GLS+ ++ Q FD + T + F+ + Y R G ++ ++V R+ LPS+V
Sbjct: 437 SFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGMEVAVAHVRRKDLPSYV 496
Query: 226 F 226
Sbjct: 497 L 497
>gi|57834146|emb|CAE04327.2| OSJNBb0016D16.18 [Oryza sativa Japonica Group]
Length = 556
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/241 (45%), Positives = 152/241 (63%), Gaps = 15/241 (6%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEM--GELGFS--VWDPRKNPKDRSHRMPIITPAYHC 56
ML+ RFFRV+ +W+WP+PVM+ IE GELG S VWDPR+NP+D+ H MPI+TPAY C
Sbjct: 257 MLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNPRDKIHLMPIVTPAYPC 316
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEI---ELGKAEWSALFEHYPFFEAYENYLQVD- 112
MNS Y VS TL+V+TEQ G+ +C+EI G W LF+ + FF AY++YLQVD
Sbjct: 317 MNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQPFNFFGAYKSYLQVDV 376
Query: 113 -IVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYI-----DPSKPCPNS 166
+ + DDL WKGWVESR R L+ ++E DT+G+L CH +P Y +P + S
Sbjct: 377 TVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPYAAEPHNEPRRRRRTS 436
Query: 167 AFFWGLSRKEVGTSKECQQ-FDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 225
+FF GLS+ ++ Q FD + T + F+ + Y R G ++ ++V R+ LPS+V
Sbjct: 437 SFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGMEVAVAHVRRKDLPSYV 496
Query: 226 F 226
Sbjct: 497 L 497
>gi|242074144|ref|XP_002447008.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
gi|241938191|gb|EES11336.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
Length = 548
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 112/248 (45%), Positives = 150/248 (60%), Gaps = 13/248 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMG-ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
MLVSRFF+V +QW+WP PVM+C IE ELG VWD R+NP+DR+H MP+ITPAY CMN
Sbjct: 260 MLVSRFFKVLSQWKWPTPVMLCDIEHDDELGLPVWDGRRNPRDRTHLMPVITPAYPCMNC 319
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAE-WSALFEHYPFFEAYENYLQVD-IVAAD 117
+Y VS T +++ EQ Q G+ C+EI G W ALF+ +PFF +++YLQVD VA
Sbjct: 320 TYNVSQATQRIIKEQIQAGHVACQEIAAGGDRGWGALFQPFPFFRTHKSYLQVDATVAGG 379
Query: 118 ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY-IDPSKPCPNSAFFWGLSR-- 174
++L WKGWVESR RQL K+E+DT G L CH P Y +P S+FF GLS+
Sbjct: 380 EEELREWKGWVESRLRQLVAKVERDTFGELLCHQNPRAYDAEPHGLRCASSFFVGLSKPQ 439
Query: 175 ----KEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 230
+ + QFD + T F + + YR R G ++ +V R+ LP +V +
Sbjct: 440 QQRQQPSPPQGQQPQFDLRATADEFLQDVYTYRFWRPGLELAVKHVRRKDLPPYVM---H 496
Query: 231 KWHRPSRH 238
K P+ H
Sbjct: 497 KIRGPNIH 504
>gi|414585702|tpg|DAA36273.1| TPA: hypothetical protein ZEAMMB73_834827 [Zea mays]
Length = 552
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/235 (46%), Positives = 146/235 (62%), Gaps = 9/235 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMG-ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
MLVSRFF+V++ WRWP PVM+C IE ELG VWD R+N DRSH MP+ITPAY CMN
Sbjct: 255 MLVSRFFKVFSHWRWPIPVMLCDIEHDDELGLPVWDVRRNLPDRSHLMPVITPAYPCMNC 314
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKA-EWSALFEHYPFFEAYENYLQVD-IVAAD 117
+Y VS T +V+ EQ Q G+ C++I G +W ALF+ PFF +++YLQVD VA
Sbjct: 315 TYNVSRATHRVIKEQIQAGDVACQKIAAGGGRDWGALFQPSPFFSTHKSYLQVDAAVAGG 374
Query: 118 ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY-IDPSKPCPNSAFFWGLSRKE 176
A++L WKGWVESR RQL K+E+DT G L CH P Y +P S+FF GLS+ +
Sbjct: 375 AEELREWKGWVESRLRQLVAKVERDTFGELLCHQNPRAYDAEPHGLRRASSFFVGLSKPQ 434
Query: 177 VGTSKECQQ-----FDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 226
+ FD + TV F++ + +Y+ R G ++ +V R LP++V
Sbjct: 435 QQHKPHPPEGYPPFFDLRATVLEFQQDVYSYKFWRPGLELVVKHVRRNKLPAYVM 489
>gi|357168295|ref|XP_003581579.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 552
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 106/237 (44%), Positives = 148/237 (62%), Gaps = 11/237 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGE--LGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
+LVSRFF+V W+WPNPV + IE + L VWDPR+NP+DR+H MP++TPAY CMN
Sbjct: 257 VLVSRFFKVLAPWKWPNPVKLRDIEHDDDDLRLLVWDPRRNPRDRTHLMPVVTPAYPCMN 316
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADA 118
S Y VS TL+ +T+Q Q GN +C++I A W ALFE + FF+ Y++YL+VD+ A
Sbjct: 317 SCYNVSHATLRTITQQLQIGNAVCQKIVASGAGWGALFEPFHFFKEYKSYLRVDVKVAGG 376
Query: 119 ---DDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY-IDPSKPCPNSAFFWGLSR 174
DL WKGWVESR RQL +++E T G+L CHP P Y P+ ++FF GLS+
Sbjct: 377 GGEGDLREWKGWVESRLRQLVMRVETATAGMLLCHPNPQAYAAKPTDLQRTTSFFVGLSK 436
Query: 175 KEVGTSKECQQ-----FDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 226
+ ++ QQ FD + T + F+R + Y R G ++ S+ R+ LPS+V
Sbjct: 437 PQPQPQEKEQQQPQVPFDLRETAEEFKRKVYMYVSWRPGMEVEVSHNRRKDLPSYVL 493
>gi|224143336|ref|XP_002336029.1| predicted protein [Populus trichocarpa]
gi|222838985|gb|EEE77336.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 101/197 (51%), Positives = 119/197 (60%), Gaps = 35/197 (17%)
Query: 82 CEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQ 141
+EIEL KA+WSALFE Y FFEAY+NYLQVDIVAADA DLL WKGWVESR RQLTLK
Sbjct: 29 TKEIELNKAQWSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLTLK--- 85
Query: 142 DTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDN 201
RKE T +E QQFD + TV FR+ I+
Sbjct: 86 --------------------------------RKEGVTGQEGQQFDIRETVDEFRQDINM 113
Query: 202 YRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQ 261
Y + G DIY S+V RR LP FVFPDGYK RPSRH N+Q+ + EDV QS S+ER
Sbjct: 114 YLPWKAGMDIYVSHVRRRQLPGFVFPDGYKRSRPSRHMNQQTNRTSEDVARSQSGSAERH 173
Query: 262 LKRKKEHEIKEVRPDKS 278
+KRK + E+ ++P S
Sbjct: 174 VKRKNDCEMANLKPSVS 190
>gi|307107277|gb|EFN55520.1| hypothetical protein CHLNCDRAFT_23208 [Chlorella variabilis]
Length = 632
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/225 (39%), Positives = 127/225 (56%), Gaps = 8/225 (3%)
Query: 8 RVYTQWRWPNPVMMCPIEMG-ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYKVSLG 66
+VY+QW WP P+M+ IE L VWDPR+NP+DR+H MPIITPAY CMNSSY VS
Sbjct: 267 QVYSQWAWPTPIMLRAIERDPSLAMPVWDPRENPRDRTHLMPIITPAYPCMNSSYNVSEC 326
Query: 67 TLQVMTEQFQCGNRICEEIEL----GKAEWSALFEHYPFFEAYENYLQVDIVAADADDLL 122
TL VM E+F+ G+ +C I G +W+ L E PFFE ++++LQV+++A+ +D
Sbjct: 327 TLAVMAEEFRRGDEVCGRIMTHNGSGLTDWAQLLEPLPFFEGFKHFLQVEVMASSQEDFE 386
Query: 123 TWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID--PSKPCPNSAFFWGLSRKEVGTS 180
W+GWV SR R L +Q Q + P++ P +F GLS+K+
Sbjct: 387 VWEGWVHSRMRLLIKVDQQQQQQQQQQDGGGGGSVADPPAQQQPRCFYFMGLSKKKAMII 446
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 225
+ + D V F + + RREG DI ++ +R LP +V
Sbjct: 447 PQ-SKVDLTQPVNEFAHKVKEFEQRREGMDISVRHLLQRQLPEWV 490
>gi|110740407|dbj|BAF02098.1| poly(A) polymerase like protein [Arabidopsis thaliana]
Length = 348
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 109/166 (65%), Gaps = 1/166 (0%)
Query: 130 SRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTSKECQQFDFQ 189
SRFRQLTLKIE+DTNG+L CHP PN+Y+D ++ + AFF GL R E +ECQQFD +
Sbjct: 1 SRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQFDIR 60
Query: 190 GTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFNEQSGKPCED 249
GTV FR+ ++ Y + G D++ S+V RR LP FVFP+GY+ R SRH N GK ED
Sbjct: 61 GTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNLPGGKSGED 120
Query: 250 VKMCQSCS-SERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSP 294
+ S S ER KRK + E+ +VRP+K K+A +S + VSP
Sbjct: 121 GSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSP 166
>gi|301095250|ref|XP_002896726.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
gi|262108787|gb|EEY66839.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
Length = 343
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 131/258 (50%), Gaps = 17/258 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM-GELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
L+SRFFR+Y W WPNP+M+ ++ LGFS W+P+ N +DRSH MPIITPAY +NSS
Sbjct: 85 LLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPKINVRDRSHLMPIITPAYPALNSS 144
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y V TL V+ +F G EIE K W+ LF FF+ +++L+V+I A A D
Sbjct: 145 YNVMASTLCVLKTEFDRGLDRTLEIETKKFSWAKLFVAPAFFQRSKHFLRVEITARSAQD 204
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPN--KYIDPSKPCPNSA---------FF 169
W GWVESR R L L++E ++ ++ HP+ +ID P S+ F
Sbjct: 205 FDGWFGWVESRLRHLFLRLEALSD--IRIHPFARFFDFIDTKDTRPESSSKCEVHTSWLF 262
Query: 170 WGL---SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 226
GL + K + D +++F D + R G D+ +V R +P +V
Sbjct: 263 IGLKFPAPKAAPVTGATHSVDLTSVIRDFATYTDQWEGRHGGMDMQIDHVTRSQIPEWVL 322
Query: 227 PDGYKWHRPSRHFNEQSG 244
S+H + G
Sbjct: 323 ESVASGADDSKHVRKHKG 340
>gi|66806183|ref|XP_636814.1| poly polymerase [Dictyostelium discoideum AX4]
gi|74852689|sp|Q54J73.1|PAP_DICDI RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|60465216|gb|EAL63311.1| poly polymerase [Dictyostelium discoideum AX4]
Length = 809
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 143/276 (51%), Gaps = 17/276 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI-EMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++ RFF+VY W+WP P+++C I E G LG VW+P++ D++H MPIITPAY MNS+
Sbjct: 302 IIHRFFKVYEIWKWPAPILLCHIQEGGILGPKVWNPKR---DKAHLMPIITPAYPSMNST 358
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TLQ+M +F G I +IE G+ W L E FF Y Y+++D + + +D
Sbjct: 359 YNVSKSTLQLMKSEFVRGAEITRKIETGECTWKNLLEKCDFFTRYSFYIEIDCYSMNEED 418
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYI-------DPSKPCPNSAFFWGLS 173
W+GW+ES+ R L +E T + PYP + +P + C ++FF GLS
Sbjct: 419 SRKWEGWIESKLRFLISNLES-TPKMKFAVPYPKGFTNNLHKANNPDQIC--TSFFMGLS 475
Query: 174 RKEVGTSKECQQFDFQGTVKNFRRGIDNY---RVRREGRDIYFSYVCRRHLPSFVFPDGY 230
T + D V F I ++ + + DI Y+ ++ LP+FV +G
Sbjct: 476 FNFSNTPGADKSVDLTKAVTEFTGIIKDWLRTQPNPDTMDIKVQYIKKKQLPAFVKDEGP 535
Query: 231 KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKK 266
+ + +G+P K +S +S+ +L K
Sbjct: 536 EEPVKTTKKRSSTGEPSATRKKLKSENSDNKLNSPK 571
>gi|348680417|gb|EGZ20233.1| hypothetical protein PHYSODRAFT_442904 [Phytophthora sojae]
Length = 343
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 131/258 (50%), Gaps = 19/258 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG-ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
L+SRFFR+Y W WPNP+M+ ++ LGFS W+P+ N +DRSH MPIITPAY +NSS
Sbjct: 85 LLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPKINVRDRSHLMPIITPAYPALNSS 144
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y V TL ++ +F G EIE K+ W+ LF FF+ +++L+V I A +A+D
Sbjct: 145 YNVMASTLHILKAEFGKGFNRTLEIETKKSSWAKLFIAPVFFQRSKHFLRVQITANNAED 204
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID------------PSKPCPNSAF 168
W GWVESR R L L++E L+ HP+ ++ D + S
Sbjct: 205 FDGWFGWVESRLRHLFLRLEALPE--LRIHPFA-RFFDFGETKGATPEGSSKREVHTSWL 261
Query: 169 FWGL---SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 225
F GL + V + D +++F D + R G D+ +V R +P +V
Sbjct: 262 FIGLGFPAPNPVAATGGTHDVDLTSVIRDFAFYTDQWEARHGGMDMQIDHVTRSQIPEWV 321
Query: 226 FPDGYKWHRPSRHFNEQS 243
S+H ++S
Sbjct: 322 LESVVNGASDSKHLRKRS 339
>gi|321469973|gb|EFX80951.1| hypothetical protein DAPPUDRAFT_318160 [Daphnia pulex]
Length = 630
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 125/227 (55%), Gaps = 5/227 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WP PV++ P + L + VWDPR N DR H MPIITPAY NS++
Sbjct: 273 LVQKFFLVFSKWEWPQPVLLKPPDNVNLNYPVWDPRVNVSDRYHLMPIITPAYPQQNSTF 332
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + EEI GKA W LFE FF Y++++ + ++ +D
Sbjct: 333 NVSCSTRAVMQEEFRQGFNMTEEIMTGKASWDKLFEPPNFFVKYKHFIVLIASSSSVEDQ 392
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN---SAFFWGLSRKEVG 178
L W G VES+ R L L +E++ + L H P +Y DP +P P+ + +F GL K+
Sbjct: 393 LEWVGLVESKIRHLILALERNDHITL-AHINPEQY-DPVQPEPDTISTMWFIGLVFKKTE 450
Query: 179 TSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 225
+ D Q R + ++GR I +V R+ L S++
Sbjct: 451 SLNIDLTQDIQAFTGQVHRQASTAKTVKDGRRIDAKHVKRKQLSSYL 497
>gi|452825557|gb|EME32553.1| poly(A) polymerase [Galdieria sulphuraria]
Length = 584
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 138/269 (51%), Gaps = 45/269 (16%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGE--LGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
+++SRFFRVY+QW+WPNPV++ I G+ GF VW+P P DR H MP+ITPAY MN
Sbjct: 276 VILSRFFRVYSQWKWPNPVLLTSISPGKPSCGFKVWNPAVFPADRKHLMPVITPAYPSMN 335
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEEI--------------------------------- 85
S++ VS TL+++ E+ G I ++I
Sbjct: 336 STHNVSRTTLRIIQEEIHRGLEITDKILCQSNSSRKTISTEDTENDQTTQVEHSEETNLV 395
Query: 86 -ELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTN 144
E WS LFE FF ++NYLQ+++++ A++ W G+VES+ R LTLK+E ++
Sbjct: 396 KETEVMTWSKLFERTDFFSKFKNYLQINVISGTAENQRKWHGFVESKLRVLTLKLEILSH 455
Query: 145 GLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK-----EVGTSKECQQFDFQGTVKNFRRGI 199
L+ +PYP Y P S FF GLS SKE ++ D G V + +
Sbjct: 456 TLI--YPYPVPYTRPGVQFCES-FFIGLSFSLPKLPNQNGSKE-RKIDMSGPVSEWVNYV 511
Query: 200 DNYRVRREGRDIYFSYVCRRHLPSFVFPD 228
++ R ++ +V R+ LP +VF D
Sbjct: 512 LSWPFRTSDMEVSVEHVKRKFLPEYVFKD 540
>gi|449496519|ref|XP_002196793.2| PREDICTED: poly(A) polymerase gamma [Taeniopygia guttata]
Length = 746
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 139/267 (52%), Gaps = 13/267 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+++FF ++++W WP PV++ +E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LINKFFLIFSKWDWPKPVLLKRLEESFLNLPVWDPRVNPSDRYHVMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+FQ G + +EI GK++WS LFE FF+ Y++Y+ + A +
Sbjct: 327 NVSVSTRAVMVEEFQRGLEVTDEILKGKSDWSKLFEPLNFFQKYKHYIVLTASAFTEEHH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G V+S+ R L +E++ T +Q +P + + S +F GL K+
Sbjct: 387 LNWIGLVKSKIRVLVGNLERNEFITIAHVQPQSFPGNEVLYKQNAYVSMWFLGLVFKKAE 446
Query: 179 TSKECQQFDFQGTVKNFR----RGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY---- 230
++ + D +++F R + +EG I +YV R+ L F P G
Sbjct: 447 SAVKT-NVDLTHGIQSFTDTVYRQASALNILKEGMKIEATYVKRKQLHYF-LPAGTLQKR 504
Query: 231 KWHRPSRHFNEQSGKPCEDVKMCQSCS 257
K R S SG C+ + +SCS
Sbjct: 505 KKQRVSDISQNNSGLQCKRSSLGESCS 531
>gi|336374059|gb|EGO02397.1| hypothetical protein SERLA73DRAFT_120990 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386978|gb|EGO28124.1| hypothetical protein SERLADRAFT_367679 [Serpula lacrymans var.
lacrymans S7.9]
Length = 558
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 95/151 (62%), Gaps = 1/151 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+P+ P DRSHRMPIITPAY M S++
Sbjct: 256 IVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPADRSHRMPIITPAYPAMCSTH 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V+ T +MTE+F+ G I +++ +G AEWS LF + FF Y YLQV AD
Sbjct: 316 NVTASTQMIMTEEFKKGADIVDKVIVGTAEWSELFAKHDFFHKYRYYLQVIASTGSADLQ 375
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
+ W G VESR RQL +K+E + L+ HP+
Sbjct: 376 IKWSGTVESRIRQLVMKLEY-VDSLILAHPF 405
>gi|342321329|gb|EGU13263.1| Endochitinase [Rhodotorula glutinis ATCC 204091]
Length = 703
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 96/148 (64%), Gaps = 1/148 (0%)
Query: 5 RFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYKVS 64
RFF + QW+WP PV++ PIE G L VW+P+ P DRSHRMPIITPAY M S++ V+
Sbjct: 277 RFFIIMHQWQWPAPVLLKPIEEGPLQVRVWNPKLYPSDRSHRMPIITPAYPSMCSTHNVT 336
Query: 65 LGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLLTW 124
L T Q+MT +F+ I +++ +G A+WS LF+ + FF Y YLQ+ + AD L W
Sbjct: 337 LSTQQIMTAEFKRAADIVDKVFVGSAKWSELFQPHDFFSKYRYYLQITASSGSADVQLKW 396
Query: 125 KGWVESRFRQLTLKIEQDTNGLLQCHPY 152
G VESR RQL +K+E + LL HP+
Sbjct: 397 SGTVESRIRQLVMKLEY-VDTLLLAHPF 423
>gi|383862407|ref|XP_003706675.1| PREDICTED: poly(A) polymerase gamma [Megachile rotundata]
Length = 616
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 128/236 (54%), Gaps = 5/236 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V++QW+WP PV++ + LGF VWDPR N DR H MPIITPAY NS++
Sbjct: 275 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITPAYPQQNSTF 334
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T +M E F+ G I EEI +GKA W LFE FF Y++Y+ + + A+D
Sbjct: 335 NVSVSTRTIMQEAFETGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLARSLSAEDQ 394
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN---SAFFWGLSRKEVG 178
L W G VES+ R L +E++ + L H P + P +P P S +F GL +
Sbjct: 395 LEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAF-PPLEPEPEGHCSMWFIGLLFAKSE 452
Query: 179 TSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 234
+D + V + +R + V +EG I +V R+ L ++V P + R
Sbjct: 453 NLNVDLTYDIKSFVDSIQRQAEQLSVLKEGMWIEAKHVKRKDLHTYVSPSLLRRER 508
>gi|145354311|ref|XP_001421431.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145354383|ref|XP_001421465.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581668|gb|ABO99724.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581702|gb|ABO99758.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 598
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 148/298 (49%), Gaps = 22/298 (7%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPI-EMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
MLV FF++++ W+W PVM+ PI + G G VWD R N +R M I+TPAY NS
Sbjct: 275 MLVYSFFQLWSAWQWTTPVMLVPIVDEGLPGMRVWDERVNKAERYQLMKILTPAYPAQNS 334
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
++ VS+ TL+V+ +F+ G + + I L A+W L+ F E Y++YL V I A + D
Sbjct: 335 TFNVSVSTLEVLKAEFKRGKEVTKMILLNTAKWEQLWCSLNFLEKYKHYLMVTISAKNED 394
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKP-CPNSAFFWGLSRKEVG 178
D W+GWV SR + L IE T G + HP ++Y DP K + F GL +
Sbjct: 395 DFKKWEGWVGSRIKLLIQGIENATGGQMLAHPGTSRYKDPEKDENSHVTLFLGLFPSSLK 454
Query: 179 TSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIY-------FSYVCRRHLPSFVFP--DG 229
+E + V+ F+ + ++ R G + Y+ R+ LPSFV DG
Sbjct: 455 KKEEKVSLNLNPAVEQFQMTVTSWMDRATGESNWVPGMQANVKYLKRKDLPSFVKEEIDG 514
Query: 230 Y--KWHRPSRHFNEQSGKPCEDVKMCQSCSSERQL----KRKKEHEIKEVRPDKSVKQ 281
Y + P + E+ ED + + S E+ L K + KE++ D S+ Q
Sbjct: 515 YVKDIYAPEK---EKKAASAEDEE--KKISEEKPLPLGDDTKAARKRKEMQEDDSITQ 567
>gi|307201288|gb|EFN81136.1| Poly(A) polymerase gamma [Harpegnathos saltator]
Length = 609
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 129/236 (54%), Gaps = 5/236 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V++QW+WP PV++ + LG+ VWDPR N DR H MPIITPAY NS++
Sbjct: 271 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPIITPAYPQQNSTF 330
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T +M E F+ G I EEI +GKA W LFE FF Y++Y+ + ++ A+D
Sbjct: 331 NVSVSTRTIMQEAFENGLSITEEIIMGKANWDKLFEPPNFFSKYKHYIVLLARSSTAEDQ 390
Query: 122 LTWKGWVESRFRQLTLKIEQDTN-GLLQCHP--YPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ + L +P +P +P K C S +F GL +
Sbjct: 391 LEWCGLVESKIRHLIGTLERNPHINLAHVNPEAFPPLDPEPDKHC--SMWFIGLLFAKSE 448
Query: 179 TSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 234
+D + V+ R + + +EG I +V R+ L ++V P K R
Sbjct: 449 NLNIDLTYDIKSFVETIERQAEQINMLKEGMWIEAKHVKRKDLHTYVSPSLLKKER 504
>gi|303282577|ref|XP_003060580.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458051|gb|EEH55349.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 656
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 126/244 (51%), Gaps = 15/244 (6%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLV FF+++ W+W PVM+ I G VWD R N +R M IITPAY NS+
Sbjct: 242 MLVYSFFQLWDAWQWTTPVMLTAIIDEGHGLRVWDERVNKAERFQLMKIITPAYPAQNST 301
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ V+ TL V+ +F+ G C +I +G+ +W +L+E PFF +++YLQV + A DD
Sbjct: 302 FNVTHSTLHVLKREFKRGRETCAKILMGQTKWESLWEPLPFFTMHKHYLQVTMCAITEDD 361
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCP-NSAFFWGL------- 172
W+GWV SR R L +E + G L HPYP + DP+K + ++ GL
Sbjct: 362 FKKWEGWVHSRLRMLVQAVETCSGGALIAHPYPERKQDPAKDSALHCIYYIGLGPAPPPT 421
Query: 173 -----SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFP 227
R + + +Q FQ V ++ D + G +++ ++ R+ +P++ P
Sbjct: 422 TGGPAPRGTLNLNPAVEQ--FQMLVTSWVNRADGTVQWQPGMEVHVKHMKRKDVPAWAIP 479
Query: 228 DGYK 231
D K
Sbjct: 480 DSGK 483
>gi|409050023|gb|EKM59500.1| hypothetical protein PHACADRAFT_250043 [Phanerochaete carnosa
HHB-10118-sp]
Length = 556
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 94/151 (62%), Gaps = 1/151 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+PR P DRSHRMPIITPAY M +++
Sbjct: 258 IVSRFFIIMYQWSWPQPVLLKQIEDGPLPVRVWNPRLYPADRSHRMPIITPAYPSMCATH 317
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +MTE+F+ G+ I E++ +G +WS LF + FF Y YLQV D D
Sbjct: 318 NVSQSTQMIMTEEFKKGSEIVEKVIMGTTQWSELFVKHDFFHKYRYYLQVIASTGDPDLH 377
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
+ W G VESR RQL +K+E + L HP+
Sbjct: 378 IKWAGTVESRIRQLVMKLEY-VDSLTLAHPF 407
>gi|13365529|dbj|BAB39138.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 132/236 (55%), Gaps = 12/236 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +M+E+F+ G + +EI GKA+WS LFE FF+ Y++Y+ + A+ ++
Sbjct: 329 NVSTSTRTIMSEEFKNGLTVTDEILQGKADWSKLFEPPNFFQKYKHYIVLTASASTEENH 388
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN-----SAFFWGLSRKE 176
L W G VES+ R L +E++ L H P + SK N S +F G+S K+
Sbjct: 389 LEWIGLVESKIRVLVGNLERNEYITL-AHVNPQSFPG-SKENHNENEFVSMWFIGISFKK 446
Query: 177 VGTSKECQQFDFQGTVKNFR----RGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 228
+ S +C D +++F R N + ++G I ++V ++ L ++ P+
Sbjct: 447 LDNS-DCVNIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHVKKKQLHHYLPPE 501
>gi|213625101|gb|AAI69821.1| LOC733387 protein [Xenopus laevis]
Length = 750
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 122/227 (53%), Gaps = 8/227 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPIITPAYPQQNSTY 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G + +EI LG+ +WS LFE FF Y++Y+ + A+ +
Sbjct: 325 NVSISTRSVMVEEFKQGLLVTDEILLGRCDWSKLFEPPNFFHKYKHYIVLTASASTEEHH 384
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN----SAFFWGLSRKEV 177
L W G VES+ R L +E++ N + H P + C + S +F G+ K+V
Sbjct: 385 LEWVGLVESKIRVLVGNLERN-NFITLAHVNPQSFPGNRDHCKDNEYVSMWFLGIIFKKV 443
Query: 178 GTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
++ D Q R +N + ++G I ++V R+ L
Sbjct: 444 ENAESVNIDLTHDIQSFTDTVYRQANNINMLKKGMKIEATHVKRKQL 490
>gi|147905450|ref|NP_001089116.1| poly(A) polymerase gamma [Xenopus laevis]
gi|73671771|gb|AAZ80291.1| SRP 3'-adenylating protein [Xenopus laevis]
Length = 751
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 122/227 (53%), Gaps = 8/227 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 266 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPIITPAYPQQNSTY 325
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G + +EI LG+ +WS LFE FF Y++Y+ + A+ +
Sbjct: 326 NVSISTRSVMVEEFKQGLLVTDEILLGRCDWSKLFEPPNFFHKYKHYIVLTASASTEEHH 385
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN----SAFFWGLSRKEV 177
L W G VES+ R L +E++ N + H P + C + S +F G+ K+V
Sbjct: 386 LEWVGLVESKIRVLVGNLERN-NFITLAHVNPQSFPGNRDHCKDNEYVSMWFLGIIFKKV 444
Query: 178 GTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
++ D Q R +N + ++G I ++V R+ L
Sbjct: 445 ENAESVNIDLTHDIQSFTDTVYRQANNINMLKKGMKIEATHVKRKQL 491
>gi|307183537|gb|EFN70300.1| Poly(A) polymerase gamma [Camponotus floridanus]
Length = 603
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 126/226 (55%), Gaps = 3/226 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V++QW+WP PV++ + LG+ VWDPR N DR H MPIITPAY NS++
Sbjct: 275 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSDRYHLMPIITPAYPQQNSTF 334
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T +M E F+ G I EEI +GKA W LFE FF Y++Y+ + ++ A+D
Sbjct: 335 NVSVSTRTIMQEAFENGLAITEEIIIGKATWDKLFEPPNFFGKYKHYIVLLARSSSAEDQ 394
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY--IDPSKPCPNSAFFWGLSRKEVGT 179
L W G VES+ R L +E++ + L H P + +DP S +F GLS + +
Sbjct: 395 LEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLDPEPGKHCSMWFIGLSFAKSES 453
Query: 180 SKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 225
+D + V+ R + + +EG I +V R+ L ++V
Sbjct: 454 LNIDLTYDIKSFVETIERQAEQISMLKEGMWIEAKHVKRKDLHTYV 499
>gi|170090568|ref|XP_001876506.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647999|gb|EDR12242.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 600
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 95/151 (62%), Gaps = 1/151 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+P+ P DRSHRMPIITPAY M S++
Sbjct: 276 IVSRFFIIMYQWSWPQPVLLKQIEDGPLQVRVWNPKLYPADRSHRMPIITPAYPAMCSTH 335
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V+ T +MTE+F+ G I +++ +G A WS LF + FF Y YLQV +AD
Sbjct: 336 NVTASTQIIMTEEFKRGADIVDKVIVGSATWSELFAKHDFFHKYRYYLQVIASTGNADLQ 395
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
+ W G VESR RQL +K+E + L+ HP+
Sbjct: 396 IKWSGTVESRIRQLVMKLEY-VDSLILAHPF 425
>gi|380022244|ref|XP_003694961.1| PREDICTED: poly(A) polymerase gamma [Apis florea]
Length = 619
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 127/236 (53%), Gaps = 5/236 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V++QW+WP PV++ + LGF VWDPR N DR H MPIITPAY NS++
Sbjct: 276 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITPAYPQQNSTF 335
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T +M E F+ G I EEI +GKA W LFE FF Y++Y+ + + A+D
Sbjct: 336 NVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLARSLTAEDQ 395
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN---SAFFWGLSRKEVG 178
L W G VES+ R L +E++ + L H P + P +P P S +F GL +
Sbjct: 396 LEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAF-PPLEPEPERHCSMWFIGLLFAKSE 453
Query: 179 TSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 234
+D + V + R + + +EG I +V +R L ++V P K R
Sbjct: 454 NLNVDLTYDIKSFVDSILRQAEQLSMLKEGMWIEVKHVKKRDLHTYVSPSLLKRER 509
>gi|328792143|ref|XP_393202.3| PREDICTED: poly(A) polymerase gamma [Apis mellifera]
Length = 619
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/236 (37%), Positives = 127/236 (53%), Gaps = 5/236 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V++QW+WP PV++ + LGF VWDPR N DR H MPIITPAY NS++
Sbjct: 276 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPIITPAYPQQNSTF 335
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T +M E F+ G I EEI +GKA W LFE FF Y++Y+ + + A+D
Sbjct: 336 NVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLARSLTAEDQ 395
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN---SAFFWGLSRKEVG 178
L W G VES+ R L +E++ + L H P + P +P P S +F GL +
Sbjct: 396 LEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAF-PPLEPEPERHCSMWFIGLLFAKSE 453
Query: 179 TSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 234
+D + V + R + + +EG I +V +R L ++V P K R
Sbjct: 454 NLNVDLTYDIKSFVDSILRQAEQLSMLKEGMWIEVKHVKKRDLHTYVSPSLLKRER 509
>gi|218847770|ref|NP_001136382.1| poly(A) polymerase alpha [Xenopus (Silurana) tropicalis]
gi|197246240|gb|AAI68811.1| Unknown (protein for MGC:188992) [Xenopus (Silurana) tropicalis]
Length = 732
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 123/241 (51%), Gaps = 12/241 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI LGKAEWS LF+ FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRAVMVEEFKQGLAITDEILLGKAEWSKLFDAPNFFQKYKHYILLLASAPTEKQR 384
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GLSRKEV 177
L W G VES+ R L +E++ + H P + PS+ F W GL K++
Sbjct: 385 LEWVGLVESKIRILVGSLEKN-EFITLAHVNPQSFPAPSENTEKEEFRTMWVIGLVFKKM 443
Query: 178 GTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRH----LPSFVFPDGY 230
S+ +D Q R N ++ I +V R+ LPS V P
Sbjct: 444 ENSENLSVDLTYDIQSFTDTVYRQAINSKMFENEMKIAAMHVKRKQLHQLLPSHVLPKKK 503
Query: 231 K 231
K
Sbjct: 504 K 504
>gi|328853642|gb|EGG02779.1| hypothetical protein MELLADRAFT_38417 [Melampsora larici-populina
98AG31]
Length = 529
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 108/178 (60%), Gaps = 12/178 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFS--VWDPRKNPKDRSHRMPIITPAYHCMNS 59
+V+RFF V +QW WP+PV++ I G +G VW+P+ P+DR HRMPIITPAY CM S
Sbjct: 251 IVNRFFAVLSQWNWPSPVLLKAIGSGPIGDQRRVWNPKIYPQDRGHRMPIITPAYPCMCS 310
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
++ V+ T QVM +F+ G + + I G A+WSALFE + FF Y NY+Q+ + +AD
Sbjct: 311 THNVTKSTAQVMMTEFKRGLAVTDAIATGSAQWSALFEKHDFFTRYRNYIQITASSPEAD 370
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEV 177
L W G VESR R L LK+E+ + HP+ + + + + L+R+EV
Sbjct: 371 AHLKWAGTVESRLRLLVLKVEE-IETVDMAHPFIKGFSNTT---------YALNRQEV 418
>gi|41054866|ref|NP_956915.1| poly(A) polymerase gamma [Danio rerio]
gi|34783795|gb|AAH56818.1| Poly(A) polymerase gamma [Danio rerio]
Length = 744
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 130/234 (55%), Gaps = 8/234 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +M E+F+ G + +EI GKA+WS LFE FF+ Y +Y+ + A+ ++
Sbjct: 329 NVSTSTRTIMNEEFKNGLTVTDEILQGKADWSKLFEPPNFFQQYRHYIVLTASASTEENH 388
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P + ++ S +F G+S K++
Sbjct: 389 LEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRNENDFVSMWFIGISFKKLD 448
Query: 179 TSKECQQFDFQGTVKNFR----RGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 228
S +C D +++F R N + ++G I ++V ++ L ++ P+
Sbjct: 449 NS-DCVNIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHVKKKQLHHYLPPE 501
>gi|328871002|gb|EGG19374.1| polyA polymerase [Dictyostelium fasciculatum]
Length = 803
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 126/232 (54%), Gaps = 8/232 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI-EMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++RFF++Y W+WP+P+++C I + G+L VW+ ++ D+SH MPI+TPAY MNS+
Sbjct: 359 IINRFFKIYDGWKWPSPILLCQIQDGGQLAAKVWNQKR---DKSHLMPILTPAYPSMNST 415
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS TL ++ +F G I ++I+ G+ +W+ L E FF Y YLQ+D+ A + D
Sbjct: 416 YNVSRSTLSLLKSEFSRGAEITKKIDSGERKWTDLVEKGDFFTRYRFYLQIDVSAPEEDT 475
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN---SAFFWGLSRKEV 177
W+GW+ES+ R L +EQ N PY + + + + FF GL
Sbjct: 476 HRKWEGWIESKLRILISNLEQTPNMKFAI-PYAKSFANKASAVNGGICTCFFMGLQFNFS 534
Query: 178 GTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDG 229
+ D G V +F I ++ + ++ Y+ +++LP FV +G
Sbjct: 535 TAIGADKNVDLTGAVTSFTNLIKDWPGKLPTIEMKIHYIKKKNLPVFVKDEG 586
>gi|13365531|dbj|BAB39139.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 128/227 (56%), Gaps = 8/227 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +M+E+F+ G + +EI GKA+WS LFE FF+ Y++Y+ + A+ ++
Sbjct: 329 NVSTSTRTIMSEEFKNGLTVTDEILQGKADWSKLFEPPNFFQKYKHYIVLTASASTEENH 388
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P + ++ S +F G+S K++
Sbjct: 389 LEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENHNENEFVSMWFIGISFKKLD 448
Query: 179 TSKECQQFDFQGTVKNFR----RGIDNYRVRREGRDIYFSYVCRRHL 221
S +C D +++F R N + ++G I ++V ++ L
Sbjct: 449 NS-DCVNIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHVKKKQL 494
>gi|390601592|gb|EIN10986.1| Poly(A) polymerase [Punctularia strigosozonata HHB-11173 SS5]
Length = 582
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 96/151 (63%), Gaps = 1/151 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW+WP PV++ IE G L VW+P+ P DR+HRMPIITPAY M +++
Sbjct: 256 IVSRFFIIMYQWKWPQPVLLKTIEEGPLNVRVWNPKLYPTDRAHRMPIITPAYPAMCATH 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V T ++TE+ + G+ + E+I +G A+WS LF + FF+ Y YLQV +AD
Sbjct: 316 NVMASTQMIITEELKKGSELVEKIIVGTADWSELFIKHDFFDKYRYYLQVIASTGNADLQ 375
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
L W G VESR RQL +K+E + L HP+
Sbjct: 376 LKWSGTVESRIRQLVMKLEY-VDSLTLAHPF 405
>gi|260803790|ref|XP_002596772.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
gi|229282032|gb|EEN52784.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
Length = 493
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 125/236 (52%), Gaps = 4/236 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI-EMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
L+ +FF V+++W WP PV++ I E LGF VWDPR NP DR H MPIITPAY NS+
Sbjct: 255 LIHKFFLVFSRWEWPQPVLLKQIDENNRLGFQVWDPRTNPMDRFHLMPIITPAYPQQNST 314
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VSL T +M E+F+ G ++ +EI GKA W LFE FF Y++Y+ + A +
Sbjct: 315 YNVSLSTRAIMQEEFKIGLQVTQEIFEGKATWDKLFEPGSFFGKYKHYIVLSTSATSKEH 374
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY--IDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E+ T + H P +Y ++P + + +F GL ++
Sbjct: 375 HLEWVGLVESKVRILIGNLER-TAYIALAHVNPKQYPPLNPQEDVFVTNWFIGLQFNKIE 433
Query: 179 TSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 234
F+ Q R + +EG I V R+ L ++ P K+++
Sbjct: 434 GGNIDLTFEIQSFTDTVHRQAISNGTLKEGMKIEARSVRRKQLGEYLPPSLLKFNK 489
>gi|403415037|emb|CCM01737.1| predicted protein [Fibroporia radiculosa]
Length = 626
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 96/151 (63%), Gaps = 1/151 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+P+ P DR+HRMPIITPAY M +++
Sbjct: 256 IVSRFFIIMYQWSWPQPVLLKQIEEGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATH 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V+ T +MTE+F+ G+ I +++ +G AEWS LF + FF + YLQV ++D
Sbjct: 316 NVTASTQMIMTEEFKKGSEIVDKVIVGTAEWSELFAKHDFFHKHRYYLQVIASTGNSDLQ 375
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
+ W G VESR RQL +K+E L+ HP+
Sbjct: 376 IKWSGTVESRIRQLVMKLEY-VESLILAHPF 405
>gi|72012045|ref|XP_780989.1| PREDICTED: poly(A) polymerase gamma [Strongylocentrotus purpuratus]
Length = 670
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/229 (39%), Positives = 120/229 (52%), Gaps = 14/229 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG-ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
LV++FF V+T+W WP PV++ P ELGF+ WDPR N DR H MPIITPAY NS+
Sbjct: 262 LVNKFFLVFTKWAWPQPVLLKPPNTSTELGFAEWDPRVNVSDRFHLMPIITPAYPQQNST 321
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS T V+ ++ Q G I +EI GKA W LFE FF Y++Y+ + A + DD
Sbjct: 322 YNVSQSTKTVIEQELQGGLAITQEIMQGKATWEKLFESSNFFGKYKHYIVLIASAGNEDD 381
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNS----------AFFW 170
L W G VES+ R L +E++ + L H YP K I PS P S +F
Sbjct: 382 HLKWVGLVESKIRVLVGNLERNPHIKL-AHVYP-KSISPSTPLDGSEEEKTDEHSTLWFI 439
Query: 171 GLSRKEVGTSKECQ-QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCR 218
GL + +G + D Q V R ++ +EG I +V R
Sbjct: 440 GLEFQPLGPATNVNLTLDIQFFVNTVHRHSVTIKLLQEGMKIEAKHVKR 488
>gi|393215900|gb|EJD01391.1| poly polymerase [Fomitiporia mediterranea MF3/22]
Length = 629
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 98/164 (59%), Gaps = 2/164 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+PR P DRSHRMPIITPAY M +++
Sbjct: 258 IVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPRLYPGDRSHRMPIITPAYPAMCATH 317
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V+ T +MTE+F+ G I ++I G +WSALF + FF Y YLQ+ + D
Sbjct: 318 NVTESTQMIMTEEFKRGADIVDKIVFGSLQWSALFAKHDFFHKYRYYLQIIASTGNPDLQ 377
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 165
+ W G VESR RQL +K+E + L HP+ + D + C N
Sbjct: 378 IKWAGTVESRIRQLVMKLEY-VDALTLAHPFIKGF-DQTLHCLN 419
>gi|432902553|ref|XP_004077012.1| PREDICTED: poly(A) polymerase gamma-like [Oryzias latipes]
Length = 834
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 126/234 (53%), Gaps = 8/234 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +M+E+F+ G + +EI GKAEW LFE FF+ Y++Y+ + A+ ++
Sbjct: 328 NVSTSTRTIMSEEFKYGLSVTDEILQGKAEWPKLFEPPSFFQKYKHYIVLTASASTEENH 387
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF----FWGLSRKEV 177
L W G VES+ R L +E++ L H P + + + F F G+ K+V
Sbjct: 388 LEWVGLVESKIRVLVGNLERNEYITL-AHVNPQSFPGSKENRSENDFVCMWFIGIIFKKV 446
Query: 178 GTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 228
++ +D Q R +N + ++G I ++V ++ L ++ P+
Sbjct: 447 ENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHQYLPPE 500
>gi|54020874|ref|NP_001005684.1| poly(A) polymerase gamma [Xenopus (Silurana) tropicalis]
gi|49522894|gb|AAH75107.1| poly(A) polymerase beta (testis specific) [Xenopus (Silurana)
tropicalis]
Length = 752
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 122/227 (53%), Gaps = 8/227 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 266 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPIITPAYPQQNSTY 325
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G + +EI LG+ +WS LFE FF Y++Y+ + A+ +
Sbjct: 326 NVSISTRSVMVEEFKQGLSVTDEILLGRCDWSKLFEPPNFFHKYKHYIVLTASASTEEHH 385
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN----SAFFWGLSRKEV 177
L W G VES+ R L +E+++ L H P + C + S +F G+ K+V
Sbjct: 386 LEWVGLVESKIRVLVGNLERNSFITL-AHVNPQSFPGNRDHCKDNEYVSMWFLGIIFKKV 444
Query: 178 GTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
++ D Q R +N + ++G I ++V R+ L
Sbjct: 445 ENAESVNIDLTHDIQSFTDTVYRQANNINMLKKGMRIEATHVKRKQL 491
>gi|392568430|gb|EIW61604.1| poly-A polymerase [Trametes versicolor FP-101664 SS1]
Length = 652
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PVM+ PIE G L VW+P+ P DR+HRMPIITPAY M +++
Sbjct: 265 IVSRFFIIMYQWTWPQPVMLKPIEDGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATH 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V+ T +MTE+F+ + I + I +GKA WS LF + FF Y YLQV D
Sbjct: 325 NVTQSTQMIMTEEFKKASDIVDNIIVGKASWSDLFAKHDFFHKYRYYLQVIASTGGPDVQ 384
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
+ W G VESR RQL +K+E L HP+
Sbjct: 385 IKWSGTVESRIRQLVMKLEY-VESLALAHPF 414
>gi|242024112|ref|XP_002432474.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
gi|212517907|gb|EEB19736.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
Length = 625
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 121/233 (51%), Gaps = 4/233 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WP PV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 279 LVHKFFLVFSKWKWPQPVLLKQPDTLNLNFPVWDPRVNVSDRYHLMPIITPAYPQQNSTF 338
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VSL T +M ++ + G I E+I LGK W LFE FF Y +Y+ + + + +D
Sbjct: 339 NVSLSTRSIMQDELKLGLSITEDIMLGKCGWEKLFETSHFFSKYRHYIVLLLSSNSPEDQ 398
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN---SAFFWGLSRKEVG 178
L W G VES+ R L +E++ + L H P+ + P +P N + +F G+ + G
Sbjct: 399 LEWCGLVESKIRLLVGNLERNHHINL-AHVNPDSFQQPQEPDSNVLCTMWFIGVVFAKTG 457
Query: 179 TSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYK 231
+D R + +EG + YV R+ L S++ P K
Sbjct: 458 NLNVDLTYDIMSFTDTVVRQARASNIWKEGMKVVAKYVKRKELTSYLSPSVLK 510
>gi|290990211|ref|XP_002677730.1| predicted protein [Naegleria gruberi]
gi|284091339|gb|EFC44986.1| predicted protein [Naegleria gruberi]
Length = 559
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 106/176 (60%), Gaps = 3/176 (1%)
Query: 2 LVSRFFRVYTQWRWPN-PVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
L+++FF VY QW W PV++ PIE G L F VW+P+ NP+D+ H MPIITP+Y CMNS+
Sbjct: 249 LLTKFFTVYQQWNWGKVPVLLRPIEEGTLNFKVWNPKLNPRDKQHLMPIITPSYPCMNST 308
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ VS TL+ M +F+ G I ++ E G W LFE FF Y NYLQV+I ++ D
Sbjct: 309 FNVSKTTLKDMKNEFERGASITQKAENGLENWETLFEATDFFVRYSNYLQVEINTSNEVD 368
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 176
L W G+++S+ R L K+E L H YP+ + + +S F+ GL K+
Sbjct: 369 HLKWIGFIQSKVRFLIPKLEAVPG--LTIHIYPDYFHNNQGGAFSSYFYIGLEYKQ 422
>gi|47221727|emb|CAG10199.1| unnamed protein product [Tetraodon nigroviridis]
Length = 685
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 128/233 (54%), Gaps = 6/233 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +M+E+F+ G + +EI GKAEWS LFE FF+ Y++Y+ + A+ ++
Sbjct: 329 NVSTSTRTIMSEEFKYGLSVTDEILQGKAEWSKLFEPPHFFQKYKHYIVLTASASTEENH 388
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P + ++ S +F G+ K+V
Sbjct: 389 LEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRNENEFVSMWFIGIIFKKVE 448
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 228
++ +D Q R +N + + G I ++V ++ L ++ P+
Sbjct: 449 NAESVNIDLTYDIQSFTDTVYRQANNINMLKNGMKIEATHVKKKQLNLYLPPE 501
>gi|350422462|ref|XP_003493171.1| PREDICTED: poly(A) polymerase gamma-like [Bombus impatiens]
Length = 610
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 127/236 (53%), Gaps = 5/236 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V++QW+WP PV++ + LG+ VWDPR N DR H MPIITPAY NS++
Sbjct: 272 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPIITPAYPQQNSTF 331
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T +M E F+ G I EEI +GKA W LFE FF Y++Y+ + + A+D
Sbjct: 332 NVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLARSLTAEDQ 391
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN---SAFFWGLSRKEVG 178
L W G VES+ R L +E++ + L H P + P KP P S +F GL +
Sbjct: 392 LEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAF-PPLKPEPEGHCSMWFIGLLFAKSE 449
Query: 179 TSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 234
+D + V + R + + ++G I +V R+ L ++V P K R
Sbjct: 450 NLNIDLTYDIKSFVDSILRQAEQLNLLKDGMWIEAKHVKRKDLHTYVSPSLLKRER 505
>gi|340709674|ref|XP_003393427.1| PREDICTED: poly(A) polymerase gamma-like [Bombus terrestris]
Length = 617
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 127/236 (53%), Gaps = 5/236 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V++QW+WP PV++ + LG+ VWDPR N DR H MPIITPAY NS++
Sbjct: 276 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPIITPAYPQQNSTF 335
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T +M E F+ G I EEI +GKA W LFE FF Y++Y+ + + A+D
Sbjct: 336 NVSVSTRTIMQEAFENGLSITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLARSLTAEDQ 395
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN---SAFFWGLSRKEVG 178
L W G VES+ R L +E++ + L H P + P KP P S +F GL +
Sbjct: 396 LEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAF-PPLKPEPEGHCSMWFIGLLFAKSE 453
Query: 179 TSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 234
+D + V + R + + ++G I +V R+ L ++V P K R
Sbjct: 454 NLNIDLTYDIKSFVDSILRQAEQLNLLKDGMWIEAKHVKRKDLHTYVSPSLLKRER 509
>gi|322802531|gb|EFZ22846.1| hypothetical protein SINV_14294 [Solenopsis invicta]
Length = 592
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 131/244 (53%), Gaps = 12/244 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V++QW+WP PV++ + LG+ VWDPR N DR H MPIITPAY NS++
Sbjct: 263 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSDRYHLMPIITPAYPQQNSTF 322
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T +M E F+ G I EEI +GKA W LFE FF Y++Y+ + + A+D
Sbjct: 323 NVSISTRTIMQEAFENGLAITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLAKSLTAEDQ 382
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY--IDPSKPCPNSAFFWGLSRKEVGT 179
L W G VES+ R L +E++ + L H P + ++P S +F GLS +
Sbjct: 383 LEWCGLVESKIRHLIGMLERNPHITL-AHVNPEAFPPLNPESGKHCSMWFIGLSFSKCEK 441
Query: 180 SKECQQ---------FDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 230
S++ ++ +D + V R + + +EG I +V R+ L ++V P
Sbjct: 442 SEKSEKGENINVDLTYDIKSFVDTVERQAEQINMFKEGMWIEAKHVKRKDLNTYVSPSLL 501
Query: 231 KWHR 234
K R
Sbjct: 502 KRER 505
>gi|164661493|ref|XP_001731869.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
gi|159105770|gb|EDP44655.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
Length = 527
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 96/155 (61%), Gaps = 1/155 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW+WP PV++ IE G L VW+PR P DR HRMPIITPAY M +++
Sbjct: 256 IVSRFFIILLQWKWPQPVLLKQIEDGPLPIRVWNPRLYPTDRLHRMPIITPAYPSMCATH 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V+ T VMTE+F+ G+ + + I GK W+ LFE FF Y+ YLQV + AD
Sbjct: 316 NVTQSTQMVMTEEFRRGSEVVDRIFRGKTSWNELFEKNDFFHKYKYYLQVIASSGSADLQ 375
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
L W+G VESR RQL +K+E LL HP+ +
Sbjct: 376 LKWQGTVESRLRQLIMKLEL-VPALLCAHPFVKGF 409
>gi|410900416|ref|XP_003963692.1| PREDICTED: poly(A) polymerase gamma-like [Takifugu rubripes]
Length = 861
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 128/233 (54%), Gaps = 6/233 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 266 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 325
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +M+E+F+ G + +EI GKAEWS LFE FF+ Y++Y+ + A+ ++
Sbjct: 326 NVSTSTRTIMSEEFKYGLSVTDEILQGKAEWSKLFEPPHFFQKYKHYIVLAASASTEENH 385
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P + ++ S +F G+ K++
Sbjct: 386 LEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRNENDFVSMWFIGIIFKKME 445
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 228
++ +D Q R +N + + G I ++V ++ L ++ P+
Sbjct: 446 NAESVNIDLTYDIQSFTDTVYRQANNINMLKNGMKIEATHVKKKQLNLYLPPE 498
>gi|281200800|gb|EFA75017.1| polyA polymerase [Polysphondylium pallidum PN500]
Length = 757
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 130/247 (52%), Gaps = 27/247 (10%)
Query: 2 LVSRFFRVYTQWRW----PNPVMMCPIEMGEL-GFSVWDPRKNPKDRSHRMPIITPAYHC 56
+++RFF++Y WRW P PV++CPI+ G + VW+ ++ D+SH MPI+TPAY
Sbjct: 276 IINRFFKIYETWRWGVPGPTPVLLCPIQDGGIFAAKVWNQKR---DKSHLMPILTPAYPS 332
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 116
MNS+Y VS TL ++ ++F GN+I +++E G+A W+ L E FF Y+ YLQ+D A
Sbjct: 333 MNSTYNVSKSTLSLLKDEFARGNQIAQKLESGEANWNKLLEKSDFFSRYQFYLQIDCSAQ 392
Query: 117 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY------------------ID 158
+ ++ W+GW+ES+ R+L +EQ T + P+P + D
Sbjct: 393 NEEEHRKWEGWIESKLRKLISFLEQ-TPKMKFAIPFPKSFENKPTPAATTTAANGEAVTD 451
Query: 159 PSKPCPNSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCR 218
+ ++FF GL + D V +F I ++ + ++ Y+ R
Sbjct: 452 ANNSNVCTSFFMGLGFNFSNAPGADKSVDITKAVIDFTHLIKDWAGKGPTMEMKVHYIKR 511
Query: 219 RHLPSFV 225
R LP+FV
Sbjct: 512 RQLPAFV 518
>gi|1709573|sp|P51005.1|PAPO2_XENLA RecName: Full=Poly(A) polymerase alpha-B; Short=PAP-alpha-B;
AltName: Full=Polynucleotide adenylyltransferase alpha-B
gi|643646|gb|AAC59746.1| poly(A) polymerase type 2 [Xenopus laevis]
Length = 484
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 122/241 (50%), Gaps = 12/241 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 18 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 77
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LF+ FF+ Y++Y+ + A
Sbjct: 78 NVSVSTRAVMVEEFKQGLAITDEILLVKAEWSKLFDAPNFFQKYKHYILLLASAPTEKQR 137
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GLSRKEV 177
L W G VES+ R L +E++ + H P + PS+ F W GL K++
Sbjct: 138 LEWVGLVESKIRILVGSLEKN-EFITLAHVNPQSFPSPSENSEKEEFRTMWVIGLVFKKM 196
Query: 178 GTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRH----LPSFVFPDGY 230
S+ +D Q R N ++ I +V R+ LPS V P
Sbjct: 197 ENSENLSVDLTYDIQSFTDTVYRQAINSKMFETEIKIAAMHVKRKQLHQLLPSHVLPKKK 256
Query: 231 K 231
K
Sbjct: 257 K 257
>gi|1709571|sp|P51004.1|PAPO1_XENLA RecName: Full=Poly(A) polymerase alpha-A; Short=PAP-alpha-A;
AltName: Full=Polynucleotide adenylyltransferase alpha-A
gi|643644|gb|AAC59745.1| poly(A) polymerase type 1, partial [Xenopus laevis]
Length = 715
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 123/241 (51%), Gaps = 12/241 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 250 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 309
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI LGKAEWS LF+ FF+ Y++Y+ + A
Sbjct: 310 NVSVSTRAVMIEEFKQGLAITDEILLGKAEWSKLFDAPNFFQKYKHYILLLASAPTEKQR 369
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GLSRKEV 177
L W G VES+ R L +E++ L H P + PS+ F W GL K++
Sbjct: 370 LEWVGLVESKIRILVGSLEKNEFITL-AHVNPRSFPAPSENMEKEEFRTMWVIGLVFKKM 428
Query: 178 GTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL----PSFVFPDGY 230
S+ +D Q R N ++ I +V R+ L PS V P
Sbjct: 429 ENSENLSVDLTYDIQSFTDTVDRQAINSKMFETEMKIAAMHVKRKQLHQLQPSHVSPKKK 488
Query: 231 K 231
K
Sbjct: 489 K 489
>gi|449549561|gb|EMD40526.1| hypothetical protein CERSUDRAFT_80191 [Ceriporiopsis subvermispora
B]
Length = 629
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 98/152 (64%), Gaps = 3/152 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+P+ P DR+HRMPIITPAY M +++
Sbjct: 256 IVSRFFIIMYQWSWPQPVLLKQIEDGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATH 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +MTE+F+ G+ I +++ +GKA WS LF + FF Y YLQV I + + +L
Sbjct: 316 NVSASTQMIMTEEFKKGSEIVDKVIVGKANWSELFAKHDFFHKYRYYLQV-IASTGSQEL 374
Query: 122 LT-WKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
T W G VESR RQL +K+E + L HP+
Sbjct: 375 QTKWAGTVESRIRQLVMKLEY-VDSLTLAHPF 405
>gi|209878111|ref|XP_002140497.1| poly(A) polymerase protein [Cryptosporidium muris RN66]
gi|209556103|gb|EEA06148.1| poly(A) polymerase protein, putative [Cryptosporidium muris RN66]
Length = 647
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 104/158 (65%), Gaps = 8/158 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM------GELGFSVWDPRKNPKDRSHRMPIITPAYH 55
+++RFF VY W+W NPV++C I+ G +GF VW+P NP+DR+H MPIITPA+
Sbjct: 272 IINRFFYVYKAWQWKNPVILCEIKEVPKNSPGLMGFRVWNPNTNPQDRAHLMPIITPAFP 331
Query: 56 CMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 115
MNS++ V+ TL+V+TE+ Q G+ + +EIE +A+WS L+ Y FFE +++++QV ++A
Sbjct: 332 SMNSTHNVTQTTLRVITEELQRGSELVKEIENERAQWSDLWSPYMFFENHKHFIQVKMLA 391
Query: 116 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYP 153
W GW+ES+ R L K+E T LQ P+P
Sbjct: 392 NSEQAFQKWTGWIESKIRFLVRKLE--TFKGLQVRPWP 427
>gi|332018332|gb|EGI58937.1| Poly(A) polymerase gamma [Acromyrmex echinatior]
Length = 553
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/248 (34%), Positives = 133/248 (53%), Gaps = 12/248 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V++QW+WP PV++ + LG+ VWDPR N DR H MPIITPAY NS++
Sbjct: 273 LIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVADRYHLMPIITPAYPQQNSTF 332
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T +M E F+ G I EEI +GKA W LFE FF Y++Y+ + + A+D
Sbjct: 333 NVSVSTRTIMQEAFENGLAITEEIIMGKATWDKLFEPPNFFGKYKHYIVLLAKSLSAEDQ 392
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY--IDPSKPCPNSAFFWGLSRKEVGT 179
L W G VES+ R L +E++ + L H P + ++P S +F GL+ +
Sbjct: 393 LEWCGLVESKIRHLIGMLERNPHITL-AHVNPEAFPPLNPESGKHCSMWFIGLAFSKCEK 451
Query: 180 SKECQQ---------FDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 230
S++ ++ +D + V R + + +EG I +V R+ L ++V P
Sbjct: 452 SEKSEKGENINVDLTYDIKSFVDTVERQAEQINMFKEGMWIEAKHVKRKDLHTYVSPSLL 511
Query: 231 KWHRPSRH 238
K R + +
Sbjct: 512 KKERKAEN 519
>gi|384247369|gb|EIE20856.1| Poly(A) polymerase, partial [Coccomyxa subellipsoidea C-169]
Length = 504
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 122/260 (46%), Gaps = 38/260 (14%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V RFF+V+ +W WP P+M+ IE +G VWDPR NP+D H MPIITPAY NSS
Sbjct: 249 VIVDRFFKVFARWPWPTPIMLREIEHDAMGLQVWDPRINPRDSMHLMPIITPAYPAANSS 308
Query: 61 YKVSLGTLQVMT------------EQFQCGNRICEEI--ELGKAEWSALFEHYPFFEAYE 106
Y VS TL M E+F+ G ++C I E G +W L E PFF Y
Sbjct: 309 YNVSESTLAAMKARTQLHQTCLLQEEFEHGEKVCTRILAEGGLTKWHKLLEPVPFFRNYR 368
Query: 107 NYLQVDIVAADADDL-------------LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYP 153
NYLQ + + + W GWV SR RQL +++E + P+P
Sbjct: 369 NYLQARLFLTPSQFIPFATCCFMHCILQEAWDGWVHSRLRQLVMRVEP----FVTVRPWP 424
Query: 154 NKYIDPSKP----CPNSAF-FWGLSRKEVGT--SKECQQFDFQGTVKNFRRGIDNYRVRR 206
P P P F F GL +K + + + V+ F+ + Y +
Sbjct: 425 KAIFPPRGPEAAGQPRRCFYFMGLKKKPLPSQPGGRASSVNLNNPVQEFKNQVMGYLSWK 484
Query: 207 EGRDIYFSYVCRRHLPSFVF 226
EG + ++ ++ LPSFV
Sbjct: 485 EGMHVLITHQMQKALPSFVL 504
>gi|193573537|ref|XP_001946233.1| PREDICTED: poly(A) polymerase gamma-like [Acyrthosiphon pisum]
Length = 640
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 134/236 (56%), Gaps = 11/236 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF ++++W+WP PV++ P +LG+ VWDPR N DR+H MPIITP Y NS++
Sbjct: 250 LIHKFFLIFSKWQWPQPVLLKPSYFMDLGYPVWDPRVNMADRNHVMPIITPVYPQQNSTF 309
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS TL ++ ++F+ I EI G++ WS +F+ FF Y +L + + A ++L
Sbjct: 310 NVSHSTLAIIQDEFKTSLDIMGEILTGESSWSKIFQPSKFFTKYRYFLAITVFANCDEEL 369
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYI---DPSKPCPNSAFFWGLS-RKEV 177
L W+G VESR R L +E+ + + H P++++ D S+ P+S +F GL K
Sbjct: 370 LEWRGLVESRLRFLPTSLEE-IECVQRSHLNPDQFVLPYDKSQGRPSSVWFVGLEISKSN 428
Query: 178 GTSKECQQFDFQGTVKNFRRGIDN--YRVRREGRDIYFSYVCRRHLPSFVFPDGYK 231
GT DF +++F + + + + + G DI +++ R+ L +V PD K
Sbjct: 429 GT---VVNLDFSTHIRDFCLLVKSRAHTIFKAGMDIQVNHLKRKDLRDYV-PDELK 480
>gi|354482269|ref|XP_003503321.1| PREDICTED: poly(A) polymerase alpha [Cricetulus griseus]
Length = 742
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 138/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 271 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 330
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 331 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 390
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 391 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 450
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 451 NSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL---------P 501
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
S ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 502 SHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 552
>gi|299748265|ref|XP_001837569.2| polymerase [Coprinopsis cinerea okayama7#130]
gi|298407893|gb|EAU84193.2| polymerase [Coprinopsis cinerea okayama7#130]
Length = 595
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+P+ P DR+HRMPIITPAY M S++
Sbjct: 260 IVSRFFIIMYQWSWPQPVLLKQIEDGPLQVRVWNPKLYPADRAHRMPIITPAYPSMCSTH 319
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V+ T +MTE+F+ G I + + +G A+WS LF + FF Y YLQ+ D D
Sbjct: 320 NVTASTQMIMTEEFKRGADIVDRVIVGTAQWSELFAKHDFFHKYRYYLQIIASTGDPDLQ 379
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
W G VESR RQL +K+E L+ HP+
Sbjct: 380 NKWSGTVESRIRQLVMKLEY-VESLILAHPF 409
>gi|413926073|gb|AFW66005.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 375
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 74/85 (87%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFFRV+TQW+WPNPVM+C IE +LGFS+WDPRKNP+DR+H MPIITPAY CMNSS
Sbjct: 268 MLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPIITPAYPCMNSS 327
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEI 85
Y VS TL+V+ EQFQ GN++C+ +
Sbjct: 328 YNVSTSTLRVIMEQFQFGNKVCQVL 352
>gi|392568429|gb|EIW61603.1| polymerase [Trametes versicolor FP-101664 SS1]
Length = 607
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 96/151 (63%), Gaps = 1/151 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + +W WP PV++ PIE G L VW+P+ +DRSHRMPIITPAY M +++
Sbjct: 256 IVSRFFVIMHKWSWPQPVLLKPIEDGPLQVRVWNPKVYSQDRSHRMPIITPAYPSMCATH 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V T Q+M E+FQ G I +++ LGKAEWSALF + FF+ Y YLQV + D +
Sbjct: 316 NVMQSTQQIMKEEFQRGCAIVDDVMLGKAEWSALFVKHDFFQRYRFYLQVVAASRDLEMQ 375
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
W G V S+ RQL +++E + L HP+
Sbjct: 376 NKWSGTVASKIRQLVMRLEY-VDALKLAHPF 405
>gi|440899282|gb|ELR50609.1| Poly(A) polymerase alpha, partial [Bos grunniens mutus]
Length = 736
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 138/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 384
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 385 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 444
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 445 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 495
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
S ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 496 SHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 546
>gi|228152|prf||1717389A poly(A) polymerase
Length = 689
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 145/312 (46%), Gaps = 19/312 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 447
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 448 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 498
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFI----SSEVPQP 291
S ++ E VK+ S L ++ + P ++K + + SS+
Sbjct: 499 SHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSSQGRNS 558
Query: 292 VSPGMTTEDPTN 303
+P +T TN
Sbjct: 559 PAPAVTAASVTN 570
>gi|344274222|ref|XP_003408916.1| PREDICTED: poly(A) polymerase alpha-like [Loxodonta africana]
Length = 739
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 138/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKDNPDKEEFRTMWVIGLVFKKTE 447
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V RR L + P
Sbjct: 448 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRRQLHQLL---------P 498
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
+ ++ E V++ S L ++ + P ++K + ++S
Sbjct: 499 NHVLQKKKKHSAEGVRLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 549
>gi|74354794|gb|AAI02482.1| PAPOLA protein [Bos taurus]
Length = 693
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 138/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 447
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 448 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 498
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
S ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 499 SHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 549
>gi|643|emb|CAA45031.1| poly(A) polymerase [Bos taurus]
Length = 689
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 145/312 (46%), Gaps = 19/312 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 447
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 448 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 498
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFI----SSEVPQP 291
S ++ E VK+ S L ++ + P ++K + + SS+
Sbjct: 499 SHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSSQGRNS 558
Query: 292 VSPGMTTEDPTN 303
+P +T TN
Sbjct: 559 PAPAVTAASVTN 570
>gi|28603760|ref|NP_788820.1| poly(A) polymerase alpha [Bos taurus]
gi|464345|sp|P25500.3|PAPOA_BOVIN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|605|emb|CAA43782.1| polynucleotide adenylyltransferase [Bos taurus]
gi|296475173|tpg|DAA17288.1| TPA: poly(A) polymerase alpha [Bos taurus]
Length = 739
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 138/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 447
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 448 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 498
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
S ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 499 SHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 549
>gi|426248569|ref|XP_004018035.1| PREDICTED: poly(A) polymerase alpha [Ovis aries]
Length = 739
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 138/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 447
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 448 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 498
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
S ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 499 SHVLQKKKKHSTEGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 549
>gi|74210049|dbj|BAE21312.1| unnamed protein product [Mus musculus]
Length = 739
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 140/293 (47%), Gaps = 19/293 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--GLSRKE 176
L W G VES+ R L +E++ L H P + P K P+ F W GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAP-KESPDREEFRTMWVIGLVLKK 445
Query: 177 VGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWH 233
S+ +D Q R N ++ I +V R+ L +
Sbjct: 446 TENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL-------- 497
Query: 234 RPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
PS +++ E VK+ S L ++ + P ++K + ++S
Sbjct: 498 -PSHVLQKRNKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 549
>gi|326914719|ref|XP_003203670.1| PREDICTED: poly(A) polymerase gamma-like [Meleagris gallopavo]
Length = 860
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 134/270 (49%), Gaps = 13/270 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV++FF ++++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 404 LVNKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPAYPQQNSTY 463
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T V+ E+ + G + EI GK++W LFE FF+ Y++Y+ + +
Sbjct: 464 NVSTSTRAVVVEELKHGLAVTNEILQGKSDWPKLFEQPNFFQKYKHYIVLTASTYTEEHH 523
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF----FWGLSRKEV 177
L W G VES+ R L +E++ + H P + + C S + F G+ +++
Sbjct: 524 LEWVGLVESKIRVLVGNLERN-EFINIAHVNPQSFPGNQEHCKQSRYVSMWFLGIIFRKL 582
Query: 178 GTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 234
++ + +D Q R +N + +EG I +YV R+HL F P G R
Sbjct: 583 ENTESTKIDLTYDIQSFTDAVYRQANNINMLKEGMKIETAYVKRKHLHYF-LPAGTLQKR 641
Query: 235 PSRHF----NEQSGKPCEDVKMCQSCSSER 260
+ +G C+ +S +S R
Sbjct: 642 KKQSILNISQNATGLRCKRASSNESLNSSR 671
>gi|395329948|gb|EJF62333.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 606
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 97/151 (64%), Gaps = 1/151 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + +W WP PV++ PIE G L VW+PR P+DR+HRMPIITPAY M +++
Sbjct: 256 IVSRFFIIMHRWSWPQPVLLKPIEDGPLQVRVWNPRLYPQDRNHRMPIITPAYPSMCATH 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V T Q+MTE+F+ G+ I +++ G+ +WSALF + FF Y YLQV + D D
Sbjct: 316 NVMASTQQIMTEEFKRGSEIVDQVISGEVQWSALFAKHDFFFRYRFYLQVIASSPDLDTQ 375
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
W G VES+ RQL +++E + L HP+
Sbjct: 376 NKWSGTVESKIRQLVMRLEF-VDTLKLAHPF 405
>gi|148233493|ref|NP_001083620.1| poly(A) polymerase alpha-B [Xenopus laevis]
gi|38303906|gb|AAH61931.1| Pap protein [Xenopus laevis]
Length = 731
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 122/241 (50%), Gaps = 12/241 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LF+ FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRAVMVEEFKQGLAITDEILLLKAEWSKLFDAPNFFQKYKHYILLLASAPTEKQR 384
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GLSRKEV 177
L W G VES+ R L +E++ + H P + PS+ F W GL K++
Sbjct: 385 LEWVGLVESKIRILVGSLEKN-EFITLAHVNPQSFPAPSENSEKEEFRTMWVIGLVFKKM 443
Query: 178 GTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRH----LPSFVFPDGY 230
S+ +D Q R N ++ I +V R+ LPS V P
Sbjct: 444 ENSENLSVDLTYDIQSFTDTVYRQAINSKMFETEMKIAAMHVKRKQLHQLLPSHVLPKKK 503
Query: 231 K 231
K
Sbjct: 504 K 504
>gi|403274237|ref|XP_003928889.1| PREDICTED: poly(A) polymerase alpha [Saimiri boliviensis
boliviensis]
Length = 495
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 137/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 18 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 77
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 78 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 137
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 138 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 197
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 198 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 248
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 249 NHVLQKKKKHSTESVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 299
>gi|327259110|ref|XP_003214381.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Anolis carolinensis]
Length = 771
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 137/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 299 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 358
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 359 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 418
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 419 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 478
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V RR L + P
Sbjct: 479 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHVKRRQLHQLL---------P 529
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
S ++ E V++ S L ++ P ++K + ++S
Sbjct: 530 SHVLQKKKKHSTEGVRLTALNDSSLDLSMDSDNSTSVPSPTSAMKTSPLNS 580
>gi|148686801|gb|EDL18748.1| poly (A) polymerase alpha, isoform CRA_b [Mus musculus]
Length = 540
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 139/293 (47%), Gaps = 19/293 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 69 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 128
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 129 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 188
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--GLSRKE 176
L W G VES+ R L +E++ + H P + P K P+ F W GL K+
Sbjct: 189 LEWVGLVESKIRILVGSLEKN-EFITLAHVNPQSFPAP-KESPDREEFRTMWVIGLVFKK 246
Query: 177 VGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWH 233
S+ +D Q R N ++ I +V R+ L +
Sbjct: 247 TENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL-------- 298
Query: 234 RPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
PS ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 299 -PSHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 350
>gi|363731198|ref|XP_003640929.1| PREDICTED: poly(A) polymerase gamma-like [Gallus gallus]
Length = 716
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 134/270 (49%), Gaps = 13/270 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF ++++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 266 LVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPIITPAYPQQNSTY 325
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T V+ E+ + G + EI G+++W LFE FF+ Y++Y+ + +
Sbjct: 326 NVSTSTRAVVVEELKHGLAVTNEILQGRSDWPKLFEQPNFFQKYKHYIVLTASTYTEEHH 385
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF----FWGLSRKEV 177
L W G VES+ R L +E++ + H P + + C S + F G+ +++
Sbjct: 386 LEWVGLVESKIRVLVGNLERN-EFINIAHVNPQSFPGNQEHCKQSRYVSMWFLGIIFRKL 444
Query: 178 GTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 234
+++ + +D Q R +N + +EG I +YV R+HL F P G R
Sbjct: 445 ESAESTKIDLTYDIQSFTDAVYRQANNINMLKEGMKIETAYVKRKHLHYF-LPAGTLQKR 503
Query: 235 PSRHF----NEQSGKPCEDVKMCQSCSSER 260
+ SG C+ +S +S R
Sbjct: 504 KKQSMLNISQNASGLRCKRASSNESLNSSR 533
>gi|402877145|ref|XP_003902301.1| PREDICTED: poly(A) polymerase alpha [Papio anubis]
gi|119602049|gb|EAW81643.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
gi|119602053|gb|EAW81647.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
Length = 495
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 137/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 18 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 77
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 78 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 137
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 138 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 197
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 198 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 248
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 249 NHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 299
>gi|157820829|ref|NP_001101526.1| poly(A) polymerase alpha [Rattus norvegicus]
gi|149044213|gb|EDL97595.1| poly (A) polymerase alpha (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 739
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 139/293 (47%), Gaps = 19/293 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--GLSRKE 176
L W G VES+ R L +E++ L H P + P K P+ F W GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAP-KESPDREEFRTMWVIGLVFKK 445
Query: 177 VGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWH 233
S+ +D Q R N ++ I +V R+ L +
Sbjct: 446 TENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL-------- 497
Query: 234 RPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
PS ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 498 -PSHVLQKRKKHSTEGVKLAALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 549
>gi|348554483|ref|XP_003463055.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Cavia porcellus]
Length = 741
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 137/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 270 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 329
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 330 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 389
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 390 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 449
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 450 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 500
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 501 NHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 551
>gi|395504561|ref|XP_003756616.1| PREDICTED: poly(A) polymerase alpha-like [Sarcophilus harrisii]
Length = 739
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 138/291 (47%), Gaps = 16/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 447
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V RR L +
Sbjct: 448 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHVKRRQLHQLL---------- 497
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
H ++ K +V++ S L ++ + P ++K + ++S
Sbjct: 498 PNHVLQKKKKHSSEVRLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 548
>gi|28207949|emb|CAD62628.1| unnamed protein product [Homo sapiens]
Length = 752
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 144/312 (46%), Gaps = 19/312 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 295 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 354
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 355 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 414
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 415 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 474
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 475 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 525
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFI----SSEVPQP 291
+ ++ E VK+ S L ++ + P + K + + SS+
Sbjct: 526 NHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNSSGSSQGRNS 585
Query: 292 VSPGMTTEDPTN 303
+P +T TN
Sbjct: 586 PAPAVTAASVTN 597
>gi|126290553|ref|XP_001375249.1| PREDICTED: poly(A) polymerase alpha-like [Monodelphis domestica]
Length = 738
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 138/291 (47%), Gaps = 16/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 447
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V RR L +
Sbjct: 448 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHVKRRQLHQLL---------- 497
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
H ++ K +V++ S L ++ + P ++K + ++S
Sbjct: 498 PNHVLQKKKKHSSEVRLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 548
>gi|194379500|dbj|BAG63716.1| unnamed protein product [Homo sapiens]
Length = 761
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 137/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 284 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 343
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 344 NVSVSTRMVMVEEFKQGPAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 403
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 404 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 463
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 464 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 514
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 515 NHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 565
>gi|194379056|dbj|BAG58079.1| unnamed protein product [Homo sapiens]
Length = 740
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 137/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 284 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 343
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 344 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 403
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 404 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 463
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 464 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 514
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 515 NHVLQKKKTHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 565
>gi|21914853|ref|NP_035242.1| poly(A) polymerase alpha [Mus musculus]
gi|25090856|sp|Q61183.4|PAPOA_MOUSE RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase
gi|21623967|dbj|BAC00996.1| polyA polymerase [Mus musculus]
gi|162318632|gb|AAI56655.1| Poly (A) polymerase alpha [synthetic construct]
Length = 739
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 139/293 (47%), Gaps = 19/293 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--GLSRKE 176
L W G VES+ R L +E++ + H P + P K P+ F W GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKN-EFITLAHVNPQSFPAP-KESPDREEFRTMWVIGLVFKK 445
Query: 177 VGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWH 233
S+ +D Q R N ++ I +V R+ L +
Sbjct: 446 TENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL-------- 497
Query: 234 RPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
PS ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 498 -PSHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 549
>gi|320165027|gb|EFW41926.1| poly(A) polymerase [Capsaspora owczarzaki ATCC 30864]
Length = 698
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 139/276 (50%), Gaps = 18/276 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG-ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+V+RFFRV+ W WP PV + +E L W+P N D H MPIITPAY MNS+
Sbjct: 316 IVARFFRVFHNWSWPTPVWLKAMEEDRSLALPNWNPVINASDARHLMPIITPAYPSMNST 375
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDI-VAADAD 119
+ VS+ TL+VMTE+F G ++ +IE+GK W LFE FF Y+ Y+Q+ + D
Sbjct: 376 HNVSMSTLRVMTEEFARGMQVTLDIEVGKVGWPVLFEKNNFFTRYKTYIQISARTEENQD 435
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY-----IDPSKPCPNSAFFWGLS- 173
+ W+G+VES+ R L+ + G+ HPYP + + +P + F++G+
Sbjct: 436 EHRQWEGFVESKLRMF-LQWLESAPGVDYVHPYPKTFSQTDTTESGQPVYLTIFYFGMMF 494
Query: 174 RKEVGTSKECQQFDFQGTVKNFRRGIDNYR---VRREGRDIYFSYVCRRHLPSFVFPDGY 230
+K+ GT + + + V++FR I N V D+ + R LP VF G
Sbjct: 495 KKQEGT--DPRVIELGNIVRDFREAIKNQNASFVNNPRVDLVVLPMKRPQLPENVFEGGV 552
Query: 231 K---WHRPSRHFNE-QSGKPCEDVKMCQSCSSERQL 262
+ RP + N + P V S S+ + +
Sbjct: 553 RPAPTKRPKKDKNAPATSAPAGTVAAAPSTSAAQSI 588
>gi|148686800|gb|EDL18747.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
gi|148686803|gb|EDL18750.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
Length = 736
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 139/293 (47%), Gaps = 19/293 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 384
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--GLSRKE 176
L W G VES+ R L +E++ + H P + P K P+ F W GL K+
Sbjct: 385 LEWVGLVESKIRILVGSLEKN-EFITLAHVNPQSFPAP-KESPDREEFRTMWVIGLVFKK 442
Query: 177 VGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWH 233
S+ +D Q R N ++ I +V R+ L +
Sbjct: 443 TENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL-------- 494
Query: 234 RPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
PS ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 495 -PSHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 546
>gi|344301689|gb|EGW31994.1| Poly(A) polymerase PAPalpha [Spathaspora passalidarum NRRL Y-27907]
Length = 556
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 97/159 (61%), Gaps = 2/159 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +YT+W WP PV++ PIE G L VW+PR P DR HRMP+ITPAY M ++
Sbjct: 253 VIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD- 119
+ ++ T +V+ + G + +I LGK+ WSAL E + FF Y+ YL + +D
Sbjct: 313 HNITSSTQKVIMSELARGAEVMNQINLGKSSWSALLERHDFFHKYKFYLCIVAATTSSDE 372
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID 158
+ L W G VES+ R L LK+E T+G+ HPY + D
Sbjct: 373 EHLKWSGLVESKLRHLVLKLEV-TDGIELAHPYVKDFSD 410
>gi|380809032|gb|AFE76391.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383415357|gb|AFH30892.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944938|gb|AFI36074.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 724
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 137/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 447
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 448 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 498
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 499 NHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 549
>gi|32490557|ref|NP_116021.2| poly(A) polymerase alpha isoform 1 [Homo sapiens]
gi|332843097|ref|XP_003314562.1| PREDICTED: poly(A) polymerase alpha [Pan troglodytes]
gi|426377955|ref|XP_004055715.1| PREDICTED: poly(A) polymerase alpha [Gorilla gorilla gorilla]
gi|59803092|sp|P51003.4|PAPOA_HUMAN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|23271194|gb|AAH36014.1| Poly(A) polymerase alpha [Homo sapiens]
gi|119602048|gb|EAW81642.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|119602050|gb|EAW81644.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|306921445|dbj|BAJ17802.1| poly(A) polymerase alpha [synthetic construct]
gi|410307962|gb|JAA32581.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351881|gb|JAA42544.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351883|gb|JAA42545.1| poly(A) polymerase alpha [Pan troglodytes]
Length = 745
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 137/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 447
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 448 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 498
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 499 NHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 549
>gi|388454164|ref|NP_001252826.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809034|gb|AFE76392.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809036|gb|AFE76393.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411427|gb|AFH28927.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411429|gb|AFH28928.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944936|gb|AFI36073.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944940|gb|AFI36075.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 745
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 137/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 447
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 448 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 498
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 499 NHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 549
>gi|148686802|gb|EDL18749.1| poly (A) polymerase alpha, isoform CRA_c [Mus musculus]
Length = 729
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 139/293 (47%), Gaps = 19/293 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 384
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--GLSRKE 176
L W G VES+ R L +E++ L H P + P K P+ F W GL K+
Sbjct: 385 LEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAP-KESPDREEFRTMWVIGLVFKK 442
Query: 177 VGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWH 233
S+ +D Q R N ++ I +V R+ L +
Sbjct: 443 TENSENLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLL-------- 494
Query: 234 RPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
PS ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 495 -PSHVLQKRKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 546
>gi|355693555|gb|EHH28158.1| hypothetical protein EGK_18525, partial [Macaca mulatta]
gi|355778841|gb|EHH63877.1| hypothetical protein EGM_16936, partial [Macaca fascicularis]
Length = 745
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 137/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 447
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 448 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 498
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 499 NHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 549
>gi|119620437|gb|EAX00032.1| poly(A) polymerase gamma, isoform CRA_d [Homo sapiens]
Length = 430
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 29 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 88
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 89 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 148
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 149 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 200
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 201 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 254
>gi|397526096|ref|XP_003832975.1| PREDICTED: poly(A) polymerase alpha, partial [Pan paniscus]
Length = 804
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 137/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 327 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 386
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 387 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 446
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 447 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 506
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 507 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 557
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 558 NHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 608
>gi|355709247|gb|AES03528.1| poly polymerase gamma [Mustela putorius furo]
Length = 603
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 131 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 190
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 191 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 250
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N YI S +F
Sbjct: 251 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYI--------SMWFL 302
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 303 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 356
>gi|409079597|gb|EKM79958.1| hypothetical protein AGABI1DRAFT_113202 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 615
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+P+ P DRSHRMPIITPAY M +++
Sbjct: 258 IVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSHRMPIITPAYPAMCATH 317
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V+ T +MTE+F+ G I +++ +G A WS LF + FF Y YLQV ++D
Sbjct: 318 NVTESTQMIMTEEFKKGADIVDKVIVGSASWSDLFAKHDFFHKYRYYLQVIASTGNSDLQ 377
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
+ W G VESR RQL +K+E L HP+
Sbjct: 378 IKWAGTVESRIRQLIMKLEY-VESLTLAHPF 407
>gi|426192448|gb|EKV42384.1| hypothetical protein AGABI2DRAFT_195729 [Agaricus bisporus var.
bisporus H97]
Length = 615
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 93/151 (61%), Gaps = 1/151 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+P+ P DRSHRMPIITPAY M +++
Sbjct: 258 IVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSHRMPIITPAYPAMCATH 317
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V+ T +MTE+F+ G I +++ +G A WS LF + FF Y YLQV ++D
Sbjct: 318 NVTESTQMIMTEEFKKGADIVDKVIVGSASWSDLFAKHDFFHKYRYYLQVIASTGNSDLQ 377
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
+ W G VESR RQL +K+E L HP+
Sbjct: 378 IKWAGTVESRIRQLIMKLEY-VESLTLAHPF 407
>gi|3127182|gb|AAC16061.1| poly(A) polymerase II [Gallus gallus]
Length = 621
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 116/226 (51%), Gaps = 6/226 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 150 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 209
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 210 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 269
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 270 LEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEEYRTMWVIGLVFKKTE 329
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ I +V R+ L
Sbjct: 330 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAARHVKRKQL 375
>gi|13641252|gb|AAK31791.1| SRP RNA 3' adenylating enzyme/pap2 [Homo sapiens]
Length = 736
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQSEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|395827780|ref|XP_003787073.1| PREDICTED: poly(A) polymerase alpha [Otolemur garnettii]
Length = 740
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 138/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 447
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 448 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 498
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
+ ++ E V++ S L ++ + P ++K + ++S
Sbjct: 499 NHVLQKKKKHSTEGVRLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 549
>gi|392587022|gb|EIW76357.1| Poly(A) polymerase [Coniophora puteana RWD-64-598 SS2]
Length = 629
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 94/151 (62%), Gaps = 1/151 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+P+ P DRSHRMPIITPAY M S++
Sbjct: 256 IVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPGDRSHRMPIITPAYPAMCSTH 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V+ T ++TE+F+ G I +++ +G A W+ LF + FF Y YLQV + +
Sbjct: 316 NVTQSTQMIVTEEFKKGADIVDKVIVGSATWADLFRKHDFFHKYRYYLQVIASTDNTETQ 375
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
+ W G VESR RQL +K+E + L+ HP+
Sbjct: 376 IKWAGTVESRLRQLVMKLEY-VDSLILAHPF 405
>gi|345325876|ref|XP_001511509.2| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Ornithorhynchus anatinus]
Length = 740
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 138/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 388
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 448
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 449 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHVKRKQLHQLL---------P 499
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
+ ++ E V++ S L ++ + P ++K + ++S
Sbjct: 500 NHVLQKKKKHSMEGVRLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 550
>gi|449280702|gb|EMC87938.1| Poly(A) polymerase alpha, partial [Columba livia]
Length = 736
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 119/235 (50%), Gaps = 10/235 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 384
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 385 LEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEEYRTMWVIGLVFKKTE 444
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRH----LPSFVF 226
S+ +D Q R N ++ I +V R+ LPS V
Sbjct: 445 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAARHVKRKQLHQLLPSHVL 499
>gi|310750335|ref|NP_001185530.1| poly(A) polymerase alpha [Gallus gallus]
Length = 737
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 116/226 (51%), Gaps = 6/226 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 327 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 387 LEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEEYRTMWVIGLVFKKTE 446
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ I +V R+ L
Sbjct: 447 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAARHVKRKQL 492
>gi|119602055|gb|EAW81649.1| poly(A) polymerase alpha, isoform CRA_f [Homo sapiens]
Length = 744
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 134/287 (46%), Gaps = 15/287 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 447
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 448 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 498
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQA 282
+ ++ E VK+ S L ++ + P + K +
Sbjct: 499 NHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTS 545
>gi|426335656|ref|XP_004029330.1| PREDICTED: poly(A) polymerase gamma [Gorilla gorilla gorilla]
Length = 736
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|402890991|ref|XP_003908748.1| PREDICTED: poly(A) polymerase gamma [Papio anubis]
Length = 700
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 231 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 290
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 291 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 350
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 351 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 402
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 403 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 456
>gi|147900391|ref|NP_001091535.1| poly(A) polymerase gamma [Bos taurus]
gi|146186839|gb|AAI40626.1| PAPOLG protein [Bos taurus]
gi|296482594|tpg|DAA24709.1| TPA: poly(A) polymerase gamma [Bos taurus]
Length = 740
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|297667577|ref|XP_002812053.1| PREDICTED: poly(A) polymerase gamma [Pongo abelii]
Length = 736
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|344291804|ref|XP_003417620.1| PREDICTED: poly(A) polymerase gamma-like [Loxodonta africana]
Length = 741
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPADRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|384080895|dbj|BAM11110.1| poly(A) polymerase alpha, partial [Siebenrockiella crassicollis]
Length = 352
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 116/226 (51%), Gaps = 6/226 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 19 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 78
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 79 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 138
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 139 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 198
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ I +V R+ L
Sbjct: 199 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHVKRKQL 244
>gi|410962897|ref|XP_003988005.1| PREDICTED: poly(A) polymerase alpha [Felis catus]
Length = 739
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 138/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 447
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 448 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 498
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
+ ++ E V++ S L ++ + P ++K + ++S
Sbjct: 499 NHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 549
>gi|326921016|ref|XP_003206760.1| PREDICTED: poly(A) polymerase alpha-like [Meleagris gallopavo]
Length = 752
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 116/226 (51%), Gaps = 6/226 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 281 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 340
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 341 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 400
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 401 LEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEEYRTMWVIGLVFKKTE 460
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ I +V R+ L
Sbjct: 461 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAARHVKRKQL 506
>gi|426223633|ref|XP_004005979.1| PREDICTED: poly(A) polymerase gamma [Ovis aries]
Length = 740
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|281345200|gb|EFB20784.1| hypothetical protein PANDA_017098 [Ailuropoda melanoleuca]
Length = 736
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 138/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 384
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 385 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 444
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 445 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 495
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
+ ++ E V++ S L ++ + P ++K + ++S
Sbjct: 496 NHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 546
>gi|16306568|ref|NP_075045.2| poly(A) polymerase gamma [Homo sapiens]
gi|332813224|ref|XP_515496.3| PREDICTED: poly(A) polymerase gamma isoform 6 [Pan troglodytes]
gi|397521664|ref|XP_003830910.1| PREDICTED: poly(A) polymerase gamma [Pan paniscus]
gi|116242699|sp|Q9BWT3.2|PAPOG_HUMAN RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Neo-poly(A) polymerase; Short=Neo-PAP; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|15080911|gb|AAK83701.1|AF312211_1 neo-poly(A) polymerase [Homo sapiens]
gi|15384858|emb|CAC59751.1| poly(A) polymerase gamma [Homo sapiens]
gi|84202581|gb|AAI11702.1| Poly(A) polymerase gamma [Homo sapiens]
gi|88682947|gb|AAI13748.1| Poly(A) polymerase gamma [Homo sapiens]
gi|119620439|gb|EAX00034.1| poly(A) polymerase gamma, isoform CRA_f [Homo sapiens]
gi|189054448|dbj|BAG37221.1| unnamed protein product [Homo sapiens]
gi|410216568|gb|JAA05503.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410265336|gb|JAA20634.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410295358|gb|JAA26279.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410346708|gb|JAA40709.1| poly(A) polymerase gamma [Pan troglodytes]
Length = 736
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|390469486|ref|XP_002754311.2| PREDICTED: poly(A) polymerase alpha isoform 1 [Callithrix jacchus]
Length = 745
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 133/285 (46%), Gaps = 15/285 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 447
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 448 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 498
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVK 280
+ ++ E VK+ S L ++ + P + K
Sbjct: 499 NHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATK 543
>gi|348563534|ref|XP_003467562.1| PREDICTED: poly(A) polymerase gamma [Cavia porcellus]
Length = 741
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|388857257|emb|CCF49099.1| probable PAP1-poly(A) polymerase [Ustilago hordei]
Length = 672
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 89/139 (64%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF ++ QW+WP PV++ PIE G L VW+P+ P DR HRMPIITPAY M +++
Sbjct: 268 IVSRFFIIFYQWKWPQPVLLTPIEDGPLSVRVWNPKLYPSDRLHRMPIITPAYPGMCATH 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VMT +F+ + + + +GK +W LF + FF Y+ YLQV + AD
Sbjct: 328 NVSQSTQMVMTSEFKRAAEVVDRVIIGKTDWCELFAKHDFFFKYKYYLQVIASSGSADLQ 387
Query: 122 LTWKGWVESRFRQLTLKIE 140
L W G VES+ RQL +K+E
Sbjct: 388 LKWHGTVESKIRQLVMKLE 406
>gi|311252569|ref|XP_003125156.1| PREDICTED: poly(A) polymerase gamma-like [Sus scrofa]
Length = 741
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|73969700|ref|XP_852387.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Canis lupus
familiaris]
Length = 738
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|291386749|ref|XP_002709901.1| PREDICTED: poly(A) polymerase gamma [Oryctolagus cuniculus]
Length = 739
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|389744511|gb|EIM85694.1| poly-A polymerase [Stereum hirsutum FP-91666 SS1]
Length = 628
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+P+ P DRSHRMPIITPAY M +++
Sbjct: 256 IVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPGDRSHRMPIITPAYPAMCATH 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V+ T +MTE+F+ G I +++ +G A WS LF + FF Y YLQ+ D
Sbjct: 316 NVTASTQMIMTEEFKKGADIVDKVIVGTATWSELFAKHDFFHKYRYYLQIIASTGDPALQ 375
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
+ W G VESR RQL +K+E L HP+
Sbjct: 376 IKWAGTVESRLRQLVMKLEF-VESLQLAHPF 405
>gi|301783837|ref|XP_002927334.1| PREDICTED: poly(A) polymerase alpha-like [Ailuropoda melanoleuca]
Length = 739
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 138/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 447
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 448 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 498
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
+ ++ E V++ S L ++ + P ++K + ++S
Sbjct: 499 NHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 549
>gi|345804115|ref|XP_537551.3| PREDICTED: poly(A) polymerase alpha [Canis lupus familiaris]
Length = 832
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 145/312 (46%), Gaps = 19/312 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 361 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 420
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 421 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 480
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 481 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 540
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 541 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 591
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFI----SSEVPQP 291
+ ++ E V++ S L ++ + P ++K + + SS+
Sbjct: 592 NHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSSQGRNS 651
Query: 292 VSPGMTTEDPTN 303
+P +T TN
Sbjct: 652 PAPAVTAASVTN 663
>gi|296223786|ref|XP_002757774.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Callithrix jacchus]
Length = 736
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGSKEHHKDNNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|291413714|ref|XP_002723110.1| PREDICTED: poly(A) polymerase beta (testis specific)-like
[Oryctolagus cuniculus]
Length = 629
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 148/331 (44%), Gaps = 25/331 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 388
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVLKKPE 448
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N + I ++ R+ L +
Sbjct: 449 NSEILSIDLTYDIQSFTDTVYRQAINSKTFEMDMKIDAMHLRRKELHQLL---------- 498
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSPG 295
H ++ P E V++ + S+ L E+ + P V + P P
Sbjct: 499 PNHVLQKKKHPAEGVRL--TAVSDSSLGTDSENSMPVPSPTGLVTGSCPGRSSPAPAVLS 556
Query: 296 MTTEDPTNNSEVMS-------SGGHLVSEKG 319
++ T SEV S G ++SE G
Sbjct: 557 VSLGSSTQPSEVASQPLSPSEGAGAVLSEGG 587
>gi|301783573|ref|XP_002927202.1| PREDICTED: poly(A) polymerase gamma-like [Ailuropoda melanoleuca]
Length = 739
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|119620435|gb|EAX00030.1| poly(A) polymerase gamma, isoform CRA_b [Homo sapiens]
Length = 743
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|449504503|ref|XP_002200600.2| PREDICTED: poly(A) polymerase alpha [Taeniopygia guttata]
Length = 850
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 116/226 (51%), Gaps = 6/226 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 378 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 437
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 438 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 497
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 498 LEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEEYRTMWVIGLVFKKTE 557
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ I +V R+ L
Sbjct: 558 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAARHVKRKQL 603
>gi|440911569|gb|ELR61221.1| Poly(A) polymerase gamma, partial [Bos grunniens mutus]
Length = 737
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 264 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 323
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 324 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 383
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 384 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 435
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 436 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 489
>gi|332864603|ref|XP_003318331.1| PREDICTED: poly(A) polymerase beta [Pan troglodytes]
gi|397498031|ref|XP_003819800.1| PREDICTED: poly(A) polymerase beta [Pan paniscus]
Length = 637
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/226 (37%), Positives = 114/226 (50%), Gaps = 6/226 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A+
Sbjct: 329 NVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASASTEKQH 388
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLL-----QCHPYPNKYIDPSKPCPNSAFFWGLSRKE 176
L W G VES+ R L +E++ L Q P P + D + C GL + E
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEEFCTMWVIGLGLKKPE 448
Query: 177 VGTSKECQ-QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
+D Q R N ++ G I ++ R+ L
Sbjct: 449 NSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAMHLRRKEL 494
>gi|149737664|ref|XP_001489128.1| PREDICTED: poly(A) polymerase alpha-like [Equus caballus]
Length = 755
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 138/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 284 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 343
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 344 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 403
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 404 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 463
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 464 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 514
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
+ ++ E V++ S L ++ + P ++K + ++S
Sbjct: 515 NHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 565
>gi|371470953|gb|AEX30810.1| poly(A) polymerase [Bubalus bubalis]
Length = 739
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 137/292 (46%), Gaps = 17/292 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GLSRKEV 177
L W G VES+ R L +E++ L H P + P + F W GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFQAPKENPDKEEFRTMWVIGLVFKKT 446
Query: 178 GTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 234
S+ +D Q R N ++ I +V R+ L +
Sbjct: 447 ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHPLL--------- 497
Query: 235 PSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
PS ++ E VK+ S L ++ + P ++K + ++S
Sbjct: 498 PSHVLQKKKKHSTEGVKLTPMNDSSLDLSMDSDNSMCVPSPTSAMKASSLNS 549
>gi|194220708|ref|XP_001917579.1| PREDICTED: poly(A) polymerase gamma-like [Equus caballus]
Length = 741
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|281354338|gb|EFB29922.1| hypothetical protein PANDA_016961 [Ailuropoda melanoleuca]
Length = 736
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 264 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 323
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 324 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 383
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 384 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 435
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 436 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 489
>gi|403260636|ref|XP_003922768.1| PREDICTED: poly(A) polymerase gamma [Saimiri boliviensis
boliviensis]
Length = 736
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGSKEHHKDNNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|170031421|ref|XP_001843584.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
gi|167869844|gb|EDS33227.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
Length = 661
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 131/247 (53%), Gaps = 18/247 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WP PV++ + LGF VWDPR N +DR H MPIITPAY NS++
Sbjct: 280 LVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQNSTF 339
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +VM +F G +I +EI LGKA W LFE FF Y +++ + + + +ADD
Sbjct: 340 NVSSSTRKVMLNEFNRGMQITDEIMLGKAGWDKLFEAPSFFFKYRHFIVLLVTSNNADDH 399
Query: 122 LTWKGWVESRFRQLTLKIEQDTN-GLLQCHPY------PNKYID---PSKPCPNSAFFWG 171
L W G VES+ R L +E++ + L +P N+ D K S +F G
Sbjct: 400 LEWCGLVESKIRYLIQNLERNLHINLAHVNPKCFEQQEQNQKDDGGEGGKTTLCSLWFIG 459
Query: 172 LSRKEVGTSKECQQFDFQGTVKNFRRGIDNY----RVRREGRDIYFSYVCRRHLPSFVFP 227
L + E D +++NF + + +V ++G I +V R+ L ++ P
Sbjct: 460 LEFER----SENLNVDLTESIQNFTDAVHKHAVHIKVLKDGMKIEARHVRRKQLNQYLDP 515
Query: 228 DGYKWHR 234
+ K R
Sbjct: 516 NLLKRER 522
>gi|10435509|dbj|BAB14604.1| unnamed protein product [Homo sapiens]
Length = 675
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 123/238 (51%), Gaps = 22/238 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 264 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 323
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 324 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 383
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 384 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 435
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 225
G+ + V ++ +D Q R +N + +EG I ++V ++ L ++
Sbjct: 436 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 493
>gi|26330928|dbj|BAC29194.1| unnamed protein product [Mus musculus]
Length = 739
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPTNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKANNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + ++G I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQL 492
>gi|410954895|ref|XP_003984095.1| PREDICTED: poly(A) polymerase gamma [Felis catus]
Length = 762
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 123/238 (51%), Gaps = 22/238 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 288 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 347
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 348 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 407
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 408 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 459
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 225
G+ + V ++ +D Q R +N + +EG I ++V ++ L ++
Sbjct: 460 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 517
>gi|380815688|gb|AFE79718.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|194038370|ref|XP_001929110.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Sus scrofa]
Length = 739
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 116/226 (51%), Gaps = 6/226 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 447
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ I +V R+ L
Sbjct: 448 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 493
>gi|383413715|gb|AFH30071.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|355565713|gb|EHH22142.1| hypothetical protein EGK_05354, partial [Macaca mulatta]
gi|355751336|gb|EHH55591.1| hypothetical protein EGM_04830, partial [Macaca fascicularis]
Length = 733
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 264 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 323
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 324 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 383
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 384 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 435
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 436 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 489
>gi|126303830|ref|XP_001375093.1| PREDICTED: poly(A) polymerase gamma [Monodelphis domestica]
Length = 748
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 130/260 (50%), Gaps = 15/260 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 266 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 325
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 326 NVSTSTRTVMVEEFKQGLAVTNEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 385
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P + S +F G+ + V
Sbjct: 386 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHYKESDYVSMWFLGIIFRRVE 445
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
++ +D Q R +N + +EG I ++V ++ L ++ P
Sbjct: 446 NAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL---------P 496
Query: 236 SRHFNEQSGKPCEDVKMCQS 255
+ F ++ + +D+ S
Sbjct: 497 AEIFQKKKKQSLQDINRSAS 516
>gi|395829706|ref|XP_003787987.1| PREDICTED: poly(A) polymerase gamma [Otolemur garnettii]
Length = 741
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 120/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ +
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEEHQ 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|296192583|ref|XP_002744135.1| PREDICTED: poly(A) polymerase beta [Callithrix jacchus]
Length = 634
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 116/227 (51%), Gaps = 8/227 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 266 LVRKFFLVFSEWEWPNPVLLKEPEEQNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 325
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 326 NVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 385
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GLSRKEV 177
L W G VES+ R L +E++ L H P ++ P + F W GL K+
Sbjct: 386 LEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFLAPKENPGKKEFRTMWVIGLVLKKP 444
Query: 178 GTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ G I ++ R+ L
Sbjct: 445 ENSEILSIDLTYDIQSFTDTVYRQAVNSKMFETGMKIAAMHLRRKEL 491
>gi|403173934|ref|XP_003332965.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170759|gb|EFP88546.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 671
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 97/153 (63%), Gaps = 3/153 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFS--VWDPRKNPKDRSHRMPIITPAYHCMNS 59
+V+RFF V +QW WP+PV++ PI G G +W+P+ P+DR HRMPIITPAY CM S
Sbjct: 264 IVNRFFAVLSQWNWPSPVLLKPIGPGPPGDQRRIWNPKIYPQDRGHRMPIITPAYPCMCS 323
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
++ ++ T Q+M +F+ G + +EI G W+ALF+ + FF Y YLQ+ + +A+
Sbjct: 324 THNITKSTAQIMMTEFKRGLAVTDEIATGTKPWAALFDKHDFFTRYRYYLQITASSPNAE 383
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
L W G VE+R RQL +K+E+ + HP+
Sbjct: 384 IQLKWAGTVEARLRQLVMKVEE-VETVDLAHPF 415
>gi|393246171|gb|EJD53680.1| polymerase [Auricularia delicata TFB-10046 SS5]
Length = 610
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 93/152 (61%), Gaps = 1/152 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++VSRFF + +W+WPNPV++ IE G L VW+P+ P DR+HRMPIITP Y M S+
Sbjct: 258 VIVSRFFIIMREWKWPNPVLLKQIEEGPLQVRVWNPKLYPSDRAHRMPIITPNYPSMCST 317
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ VS T ++ + + + I + I +G A WS LF + FF Y YLQV +AD
Sbjct: 318 HNVSQSTQMIIKHELRRASEIVDRIIMGSATWSELFAKHDFFHKYRYYLQVIASTENADL 377
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
L W G VESR RQL +K+E + L+ HP+
Sbjct: 378 QLKWAGTVESRLRQLVMKLEY-VDSLVLAHPF 408
>gi|297679796|ref|XP_002817705.1| PREDICTED: poly(A) polymerase beta [Pongo abelii]
Length = 637
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 117/226 (51%), Gaps = 6/226 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A+
Sbjct: 329 NVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIILLASASTEKQH 388
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLGLKKPE 448
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ G I ++ R+ L
Sbjct: 449 NSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKEL 494
>gi|226494207|ref|NP_766143.2| poly(A) polymerase gamma [Mus musculus]
gi|81885554|sp|Q6PCL9.1|PAPOG_MOUSE RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|37589275|gb|AAH59271.1| Poly(A) polymerase gamma [Mus musculus]
gi|73671773|gb|AAZ80292.1| SRP 3'-adenylating protein [Mus musculus]
gi|148675952|gb|EDL07899.1| poly(A) polymerase gamma, isoform CRA_b [Mus musculus]
Length = 739
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKANNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + ++G I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQL 492
>gi|157822073|ref|NP_001100714.1| poly(A) polymerase gamma [Rattus norvegicus]
gi|149044811|gb|EDL97997.1| poly(A) polymerase gamma (predicted) [Rattus norvegicus]
Length = 739
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 121/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKANNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + ++G I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQL 492
>gi|412986520|emb|CCO14946.1| predicted protein [Bathycoccus prasinos]
Length = 632
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 129/251 (51%), Gaps = 15/251 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGEL----GFSVWDPRKNPKDRSHRMPIITPAYHC 56
MLV FF+++ W W PVM+ +++ G WD R N +R M IITPAY
Sbjct: 265 MLVYSFFQIWDNWVWTTPVMLTSLDIAPKDQIPGLRHWDERVNKPERYQLMKIITPAYPA 324
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 116
NS++ VS TL+V+ +F+ G + ++ +G+A+W+ ++ FF Y+ YLQ+ + A
Sbjct: 325 QNSTFNVSSSTLEVLKREFKRGKIVTGKVLIGEAKWTDVWSDVQFFAKYKTYLQLIVTAD 384
Query: 117 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCP-NSAFFWGL--- 172
+ +D W+GWV SR + L +E + G + HP K+ DP K + F+GL
Sbjct: 385 NEEDFKKWEGWVGSRLKNLVQGVETFSEGAMMAHPGVKKFYDPEKDKEVHCNVFFGLFPN 444
Query: 173 SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVR-------REGRDIYFSYVCRRHLPSFV 225
G ++E ++ + ++NF+ + NY R + G + + ++ +PS+
Sbjct: 445 PSTTSGDAREKKKINLNPAIENFQMTVGNYIDRATGSVNWKPGMGVQIKLLRKKDIPSWA 504
Query: 226 FPDGYKWHRPS 236
P+G K+ +
Sbjct: 505 LPEGGKYEESA 515
>gi|351701193|gb|EHB04112.1| Poly(A) polymerase alpha, partial [Heterocephalus glaber]
Length = 736
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 139/292 (47%), Gaps = 18/292 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 266 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 325
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 326 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 385
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 386 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKK-- 443
Query: 179 TSKECQQFDFQGTVKNFR----RGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 234
T E D +++F R N ++ I +V R+ L +
Sbjct: 444 TENENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL--------- 494
Query: 235 PSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
P+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 495 PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 546
>gi|417404307|gb|JAA48913.1| Putative polya polymerase [Desmodus rotundus]
Length = 742
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 120/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHYKDNNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|55727879|emb|CAH90692.1| hypothetical protein [Pongo abelii]
gi|83405193|gb|AAI10907.1| PAPOLG protein [Homo sapiens]
Length = 506
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 120/230 (52%), Gaps = 6/230 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P S +F G+ + V
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRVE 446
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 225
++ +D Q R +N + +EG I ++V ++ L ++
Sbjct: 447 NAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|426355375|ref|XP_004045099.1| PREDICTED: poly(A) polymerase beta [Gorilla gorilla gorilla]
Length = 637
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/246 (38%), Positives = 124/246 (50%), Gaps = 15/246 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A+
Sbjct: 329 NVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASASTEKQH 388
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--GLSRKE 176
L W G VES+ R L +E++ L H P + P K P+ F W GL K+
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAP-KENPDMEEFRTMWVIGLGLKK 446
Query: 177 VGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRH----LPSFVFPDG 229
S+ +D Q R N ++ G I ++ R+ LP V D
Sbjct: 447 PENSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAMHLRRKELHQLLPHHVLQDK 506
Query: 230 YKWHRP 235
K H P
Sbjct: 507 -KAHSP 511
>gi|403287191|ref|XP_003934837.1| PREDICTED: poly(A) polymerase beta [Saimiri boliviensis
boliviensis]
Length = 634
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 116/226 (51%), Gaps = 6/226 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 266 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 325
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 326 NVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 385
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 386 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVLKKPE 445
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ G I ++ R+ L
Sbjct: 446 NSEILSIDLTYDIQSFTDTVYRQAMNSKMFETGMKIAAMHLRRKEL 491
>gi|67971414|dbj|BAE02049.1| unnamed protein product [Macaca fascicularis]
Length = 548
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 132/282 (46%), Gaps = 15/282 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 447
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 448 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL---------P 498
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDK 277
+ ++ E VK+ S L ++ + P K
Sbjct: 499 NHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPPK 540
>gi|10433147|dbj|BAB13919.1| unnamed protein product [Homo sapiens]
Length = 501
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 120/230 (52%), Gaps = 6/230 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P S +F G+ + V
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRVE 446
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 225
++ +D Q R +N + +EG I ++V ++ L ++
Sbjct: 447 NAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|109102989|ref|XP_001115228.1| PREDICTED: poly(A) polymerase gamma-like [Macaca mulatta]
Length = 736
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 119/234 (50%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + EI GK+ WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTNEILQGKSNWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|431912670|gb|ELK14688.1| Poly(A) polymerase gamma [Pteropus alecto]
Length = 741
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 120/234 (51%), Gaps = 22/234 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFW 170
L W G VES+ R L +E++ T + +P N Y+ S +F
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFL 438
Query: 171 GLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
G+ + V ++ +D Q R +N + +EG I ++V ++ L
Sbjct: 439 GIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 492
>gi|270004464|gb|EFA00912.1| hypothetical protein TcasGA2_TC003818 [Tribolium castaneum]
Length = 565
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 126/238 (52%), Gaps = 3/238 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V++QW+WP PV++ LGF+VWDPR N +DR H MPIITPAY NS++
Sbjct: 277 LVHKFFLVFSQWKWPQPVLLKQPSNVNLGFAVWDPRVNIQDRYHLMPIITPAYPQQNSTF 336
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T Q++ E+F+ G ++ ++I L K W LFE FF Y++++ + + A +D
Sbjct: 337 NVSGSTRQIIMEEFKLGLQLTDDIMLSKQTWDKLFEPPLFFMKYKHFIVLLVSAESPEDH 396
Query: 122 LTWKGWVESRFRQLTLKIEQDTN-GLLQCHPYPNKYIDPSKPCPN--SAFFWGLSRKEVG 178
L W G VES+FR L +E++ + L +P ++ + S +F GL +
Sbjct: 397 LEWCGLVESKFRLLIGTLERNQHITLAHINPESFSLLESQRESNTHCSMWFIGLEFAKSE 456
Query: 179 TSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPS 236
FD Q + + N + +EG + +V R+ L ++ P K R +
Sbjct: 457 NLNVNLTFDIQQFTETVQNHALNISMLKEGMKLEARHVKRKQLYQYLSPSLLKRERKT 514
>gi|431839265|gb|ELK01192.1| Poly(A) polymerase alpha, partial [Pteropus alecto]
Length = 746
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 137/291 (47%), Gaps = 15/291 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 275 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 334
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L K EWS LFE FF+ Y++Y+ + A
Sbjct: 335 NVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 394
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 395 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 454
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I +V R+ L + P
Sbjct: 455 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHELL---------P 505
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
+ ++ E V++ S L ++ + P ++K + ++S
Sbjct: 506 NHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNS 556
>gi|395508015|ref|XP_003758311.1| PREDICTED: poly(A) polymerase gamma [Sarcophilus harrisii]
Length = 763
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 118/226 (52%), Gaps = 6/226 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 281 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 340
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 341 NVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 400
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P + S +F G+ + V
Sbjct: 401 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHYKESDYVSMWFLGIIFRRVE 460
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
++ +D Q R +N + +EG I ++V ++ L
Sbjct: 461 NAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 506
>gi|55669561|pdb|1Q79|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 514
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 116/226 (51%), Gaps = 6/226 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 447
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ I +V R+ L
Sbjct: 448 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 493
>gi|5456696|gb|AAD43624.1|AF039957_1 testis-specific poly(A) polymerase [Mus musculus]
Length = 641
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 132/286 (46%), Gaps = 17/286 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 387
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GLSRKEV 177
L W G VES+ R L +E++ L H P + P + F W GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKETADKEEFRTMWVIGLVLKKP 446
Query: 178 GTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 234
S+ +D Q R N ++ I ++ R+ L +
Sbjct: 447 ENSEILSIDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHLRRKELHQLL--------- 497
Query: 235 PSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVK 280
P+ ++ E V++ S L E+ + P ++K
Sbjct: 498 PNHVLQKKETHLTESVRLTAVTDSSLLLSIDSENSMTAPSPTGTMK 543
>gi|55669560|pdb|1Q78|A Chain A, Crystal Structure Of Poly(A) Polymerase In Complex With
3'- Datp And Magnesium Chloride
Length = 514
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 116/226 (51%), Gaps = 6/226 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 447
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ I +V R+ L
Sbjct: 448 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 493
>gi|9910588|ref|NP_064327.1| poly(A) polymerase beta [Mus musculus]
gi|5701744|dbj|BAA83086.1| testis-specific poly(A) polymerase [Mus musculus]
gi|120538333|gb|AAI29898.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|120538567|gb|AAI29897.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|148687152|gb|EDL19099.1| poly (A) polymerase beta (testis specific) [Mus musculus]
Length = 642
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 132/286 (46%), Gaps = 17/286 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 388
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GLSRKEV 177
L W G VES+ R L +E++ + H P + P + F W GL K+
Sbjct: 389 LEWVGLVESKIRILVGSLEKN-EFITLAHVNPQSFPAPKETADKEEFRTMWVIGLVLKKP 447
Query: 178 GTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 234
S+ +D Q R N ++ I ++ R+ L +
Sbjct: 448 ENSEILSIDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHLRRKELHQLL--------- 498
Query: 235 PSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVK 280
P+ ++ E V++ S L E+ + P ++K
Sbjct: 499 PNHVLQKKETHLTESVRLTAVTDSSLLLSIDSENSMTAPSPTGTMK 544
>gi|119620434|gb|EAX00029.1| poly(A) polymerase gamma, isoform CRA_a [Homo sapiens]
Length = 508
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 120/230 (52%), Gaps = 6/230 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P S +F G+ + V
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRVE 446
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 225
++ +D Q R +N + +EG I ++V ++ L ++
Sbjct: 447 NAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|148675951|gb|EDL07898.1| poly(A) polymerase gamma, isoform CRA_a [Mus musculus]
Length = 650
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 120/230 (52%), Gaps = 6/230 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 324 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 383
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 384 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 443
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P S +F G+ + V
Sbjct: 444 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKANNYVSMWFLGIIFRRVE 503
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 225
++ +D Q R +N + ++G I ++V ++ L ++
Sbjct: 504 NAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL 553
>gi|384487946|gb|EIE80126.1| hypothetical protein RO3G_04831 [Rhizopus delemar RA 99-880]
Length = 598
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 101/164 (61%), Gaps = 2/164 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V+RFF + QW+WP PV++ P+E G L VW+P+ P DRSHRMPIITPAY M +++
Sbjct: 257 IVNRFFLIMYQWKWPQPVLLRPLEDGPLQVRVWNPKLYPADRSHRMPIITPAYPSMCATH 316
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V+ T ++M ++F+ G + I LG +WS LF FF+ +++YLQ+ + ++
Sbjct: 317 NVTESTRKIMIQEFKNGIDVASNIILGSGQWSDLFVKSDFFQQFKHYLQITSSSYSSETQ 376
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 165
L W G VE++ RQL LK+E + + HPY + D + C N
Sbjct: 377 LMWSGLVEAKLRQLVLKLET-VDMIELAHPYVKGF-DKAHYCLN 418
>gi|18203580|sp|Q9WVP6.2|PAPOB_MOUSE RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
Length = 641
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 132/286 (46%), Gaps = 17/286 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 387
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GLSRKEV 177
L W G VES+ R L +E++ L H P + P + F W GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKETADKEEFRTMWVIGLVLKKP 446
Query: 178 GTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 234
S+ +D Q R N ++ I ++ R+ L +
Sbjct: 447 ENSEILSIDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHLRRKELHQLL--------- 497
Query: 235 PSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVK 280
P+ ++ E V++ S L E+ + P ++K
Sbjct: 498 PNHVLQKKETHLTESVRLTAVTDSSLLLSIDSENSMTAPSPTGTMK 543
>gi|123980646|gb|ABM82152.1| poly(A) polymerase beta (testis specific) [synthetic construct]
gi|123995471|gb|ABM85337.1| poly(A) polymerase beta (testis specific) [synthetic construct]
Length = 636
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 118/228 (51%), Gaps = 10/228 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A+
Sbjct: 328 NVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASASTEKQH 387
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--GLSRKE 176
L W G VES+ R L +E++ L H P + P K P+ F W GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAP-KENPDMEEFRTMWVIGLGLKK 445
Query: 177 VGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ G I ++ R+ L
Sbjct: 446 PDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAVHLRRKEL 493
>gi|18203318|sp|Q9NRJ5.1|PAPOB_HUMAN RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
gi|8895537|gb|AAF81013.1|AF218840_1 testis-specific poly(A) polymerase [Homo sapiens]
gi|41474575|gb|AAS07561.1| unknown [Homo sapiens]
Length = 636
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 118/228 (51%), Gaps = 10/228 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A+
Sbjct: 328 NVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASASTEKQH 387
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--GLSRKE 176
L W G VES+ R L +E++ L H P + P K P+ F W GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAP-KENPDMEEFRTMWVIGLGLKK 445
Query: 177 VGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ G I ++ R+ L
Sbjct: 446 PDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAMHLRRKEL 493
>gi|77874206|ref|NP_064529.4| poly(A) polymerase beta [Homo sapiens]
gi|51094718|gb|EAL23967.1| poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 118/228 (51%), Gaps = 10/228 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A+
Sbjct: 329 NVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASASTEKQH 388
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--GLSRKE 176
L W G VES+ R L +E++ L H P + P K P+ F W GL K+
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAP-KENPDMEEFRTMWVIGLGLKK 446
Query: 177 VGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ G I ++ R+ L
Sbjct: 447 PDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAMHLRRKEL 494
>gi|443899034|dbj|GAC76367.1| poly(a) polymerase and related nucleotidyltransferases [Pseudozyma
antarctica T-34]
Length = 672
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 89/139 (64%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF ++ QW+WP PV++ IE G L VW+P+ P DR HRMPIITPAY M +++
Sbjct: 268 IVSRFFIIFYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRLHRMPIITPAYPGMCATH 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VMT +F+ + + + +GK +WS LF + F+ Y+ YLQV + AD
Sbjct: 328 NVSQSTQMVMTSEFKRAAEVVDRVIIGKTDWSELFAKHDFYFKYKYYLQVIASSGSADLQ 387
Query: 122 LTWKGWVESRFRQLTLKIE 140
L W G VES+ RQL +K+E
Sbjct: 388 LKWHGTVESKIRQLVMKLE 406
>gi|432104377|gb|ELK31030.1| Poly(A) polymerase alpha [Myotis davidii]
Length = 844
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 115/226 (50%), Gaps = 6/226 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 366 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 425
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L K EWS LFE FF+ Y++Y+ + A
Sbjct: 426 NVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 485
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 486 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTE 545
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ I +V R+ L
Sbjct: 546 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 591
>gi|34193801|gb|AAH36653.2| Poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 118/228 (51%), Gaps = 10/228 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A+
Sbjct: 329 NVSISTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASASTEKQH 388
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--GLSRKE 176
L W G VES+ R L +E++ L H P + P K P+ F W GL K+
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAP-KENPDMEEFRTMWVIGLGLKK 446
Query: 177 VGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ G I ++ R+ L
Sbjct: 447 PDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAVHLRRKEL 494
>gi|384497599|gb|EIE88090.1| hypothetical protein RO3G_12801 [Rhizopus delemar RA 99-880]
Length = 500
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 119/201 (59%), Gaps = 12/201 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSV--WDPRKNPKDRSHRMPIITPAYHCMNS 59
L+S+FF + T W WP+PVM+ +E G + W+P+ NP DRSHRMP+ITP+Y M +
Sbjct: 233 LISKFFHILTSWSWPSPVMLKAVEDGPAFANTKPWNPKLNPTDRSHRMPVITPSYPSMCT 292
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
++ V+ T +++T + + +I ++I G A+W LFE + FF+ Y YLQ+ +VA + +
Sbjct: 293 THNVTQSTQRIITGEIKQAAKIVDKIMAGSAKWPQLFEAHSFFKMYRQYLQITVVADNYE 352
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGT 179
L W G VE+R RQL +K+E + ++Q HP+ + + S+ C + S +V
Sbjct: 353 LQLKWTGLVEARLRQLVIKLEA-IHSVMQVHPFMDGF---SETC-----LYRTSTDKVTV 403
Query: 180 SKECQQFDFQGTVKNFRRGID 200
S + +++D T+ + +D
Sbjct: 404 S-QGEKYDNNRTIGKMKMEVD 423
>gi|354467761|ref|XP_003496337.1| PREDICTED: poly(A) polymerase beta-like [Cricetulus griseus]
Length = 642
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 131/286 (45%), Gaps = 17/286 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 388
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GLSRKEV 177
L W G VES+ R L +E++ L H P + P + F W GL K+
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENVDKEEFRTMWVIGLVLKKP 447
Query: 178 GTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 234
S+ +D Q R N ++ I ++ R+ L +
Sbjct: 448 ENSESLSIDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHLKRKELHQLL--------- 498
Query: 235 PSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVK 280
P+ ++ E V++ S L E+ + P VK
Sbjct: 499 PNHVLQKKETHLTEGVRLTAVNDSSLLLSVDSENSMSAPSPTGLVK 544
>gi|417412482|gb|JAA52623.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 725
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 114/226 (50%), Gaps = 6/226 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 281 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 340
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L K EWS LFE FF+ Y++Y+ + A
Sbjct: 341 NVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 400
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P P K + + GL K+
Sbjct: 401 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEEFRTMWVIGLVFKKTE 460
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ I +V R+ L
Sbjct: 461 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 506
>gi|308812011|ref|XP_003083313.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
gi|116055193|emb|CAL57589.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
Length = 606
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 121/241 (50%), Gaps = 12/241 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPI-EMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
MLV FF++++ W+W PVM+ PI + G G VWD R N +R M I+TPAY NS
Sbjct: 269 MLVYSFFQLWSAWQWSTPVMLVPIVDEGLPGMRVWDERVNKAERYQLMKILTPAYPAQNS 328
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
++ VS+ TL+V+ +F+ G + + I L K +W L+ F Y++YL V I A A+
Sbjct: 329 TFNVSVSTLEVLKAEFRRGKEVTKNILLNKCKWEDLWIKTSFLTMYKHYLMVSISAKTAE 388
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSK-PCPNSAFFWGLSRKEVG 178
D W+GWV SR + L IE T G + HP +Y DP K + F GL +
Sbjct: 389 DFKKWEGWVGSRVKLLIQGIENCTGGQMLAHPGTARYKDPEKEENTHVILFLGLFPSSL- 447
Query: 179 TSKECQQFDFQGTVKNFRRGIDNYRVRREGRD-------IYFSYVCRRHLPSFVFP--DG 229
KE + V+ F+ + ++ R G +V R+ LP FV DG
Sbjct: 448 KKKEKVAMNLNPAVEQFQMQVTSWMDRATGESNWVPGMQAMVRHVKRKDLPGFVREEIDG 507
Query: 230 Y 230
Y
Sbjct: 508 Y 508
>gi|417412515|gb|JAA52639.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 738
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 114/226 (50%), Gaps = 6/226 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 281 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 340
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L K EWS LFE FF+ Y++Y+ + A
Sbjct: 341 NVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 400
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P P K + + GL K+
Sbjct: 401 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEEFRTMWVIGLVFKKTE 460
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ I +V R+ L
Sbjct: 461 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 506
>gi|449018860|dbj|BAM82262.1| nuclear poly(A) polymerase [Cyanidioschyzon merolae strain 10D]
Length = 561
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 98/166 (59%), Gaps = 16/166 (9%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPI----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
+++S FFR+Y+QW+WP PV +CPI G VWDP +P+DR H MPIITPAY
Sbjct: 271 VVLSAFFRLYSQWQWPKPVKLCPIIRHQHAGLRQLKVWDP-TDPRDRRHLMPIITPAYPS 329
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKA---------EWSALFEHYPFFEAYEN 107
MNS+Y V+ TL++M E+F G +IC ++ +W L E FF Y++
Sbjct: 330 MNSTYNVTHSTLRIMMEEFARGQQICADVLAAAGSDGTGVSPRDWERLLEPSDFFARYKH 389
Query: 108 YLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYP 153
YLQ++I A + DDL W+G VESR R L ++E + HP+P
Sbjct: 390 YLQIEITAGNMDDLKKWRGHVESRLRLLVQRLE--VLPPVSVHPWP 433
>gi|330796347|ref|XP_003286229.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
gi|325083816|gb|EGC37259.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
Length = 671
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 127/241 (52%), Gaps = 28/241 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMC-PIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++RFF+VY W+WP PV++ +E G L VW+ ++ D++H MPI+TPAY MNS+
Sbjct: 286 IINRFFKVYENWKWPAPVLLTHLVEGGALAAKVWNAKR---DKAHLMPILTPAYPMMNST 342
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS T+Q++ +F G I +IE ++ ++AL E FF Y Y+Q+D A + +D
Sbjct: 343 YNVSKSTMQLLKNEFVRGAEITRKIETNESTYNALLEKSDFFTRYRFYIQIDCSAGNEED 402
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID-------PSKPCPNSAFFWGL- 172
W+GW+ES+ R L +E T + P+P + + P + C + FF GL
Sbjct: 403 HRKWEGWIESKLRFLISNLEM-TPKMKYAVPFPKSFSNLIHKESHPDQIC--TTFFMGLV 459
Query: 173 --------SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSF 224
+ K V +K + F T+K + R N DI Y+ ++ LPSF
Sbjct: 460 FNFPTTPGADKSVDLTKAVSE--FTSTIKEWLRTQPNPETM---ADIKVQYIKKKQLPSF 514
Query: 225 V 225
+
Sbjct: 515 I 515
>gi|58865618|ref|NP_001012020.1| poly(A) polymerase beta [Rattus norvegicus]
gi|50927350|gb|AAH79046.1| Poly (A) polymerase beta (testis specific) [Rattus norvegicus]
gi|149034991|gb|EDL89711.1| poly (A) polymerase beta (testis specific) [Rattus norvegicus]
Length = 642
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 135/292 (46%), Gaps = 17/292 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 388
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GLSRKEV 177
L W G VES+ R L +E++ L H P + P + F W GL K+
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENVDKEEFRTMWVIGLVLKKP 447
Query: 178 GTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 234
S+ +D Q R N ++ I ++ R+ L +
Sbjct: 448 ENSEILSIDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHLRRKELHQLL--------- 498
Query: 235 PSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
P+ ++ E V++ S L E+ + P ++K +++
Sbjct: 499 PNHVLQKKETHLTEGVRLTAVNDSSLLLSIDSENSMTAPSPTGTIKTGPLTA 550
>gi|115530785|emb|CAL49411.1| poly(A) polymerase alpha (pap) [Xenopus (Silurana) tropicalis]
Length = 474
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 115/208 (55%), Gaps = 9/208 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI LGKAEWS LF+ FF+ Y++Y+ + A
Sbjct: 325 NVSVSTRAVMVEEFKQGLAITDEILLGKAEWSKLFDAPNFFQKYKHYILLLASAPTEKQR 384
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GLSRKEV 177
L W G VES+ R L +E++ L H P + PS+ F W GL K++
Sbjct: 385 LEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPSENTEKEEFRTMWVIGLVFKKM 443
Query: 178 GTSKECQ---QFDFQG-TVKNFRRGIDN 201
S+ +D Q T +R+ I++
Sbjct: 444 ENSENLSVDLTYDIQSFTDTVYRQAINS 471
>gi|332257779|ref|XP_003277982.1| PREDICTED: poly(A) polymerase beta [Nomascus leucogenys]
Length = 637
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 115/227 (50%), Gaps = 8/227 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEQRNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSISTRMVMIEEFKQGLAITHEILLRKAEWSKLFEAPSFFQKYKHYIVLLASATTEKQH 388
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GLSRKEV 177
L W G VES+ R L +E++ L H P + P + F W GL K+
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENTDMEKFRTMWVIGLVLKKP 447
Query: 178 GTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ G I ++ R+ L
Sbjct: 448 ENSEILSIDLTYDIQSFTDTVYRQAVNSKMFEVGMKITAMHLRRKEL 494
>gi|417412403|gb|JAA52590.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 709
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 114/226 (50%), Gaps = 6/226 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 281 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 340
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L K EWS LFE FF+ Y++Y+ + A
Sbjct: 341 NVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 400
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P P K + + GL K+
Sbjct: 401 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEEFRTMWVIGLVFKKTE 460
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ I +V R+ L
Sbjct: 461 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 506
>gi|417412397|gb|JAA52587.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 707
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 114/226 (50%), Gaps = 6/226 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 281 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 340
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I +EI L K EWS LFE FF+ Y++Y+ + A
Sbjct: 341 NVSVSTRMVMVEEFKQGLAITDEILLSKGEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 400
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P P K + + GL K+
Sbjct: 401 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEEFRTMWVIGLVFKKTE 460
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ I +V R+ L
Sbjct: 461 NSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 506
>gi|395329949|gb|EJF62334.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 628
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+P+ P DR+HRMPIITPAY M +++
Sbjct: 261 IVSRFFIIMYQWAWPQPVLLKQIEDGPLPVRVWNPKSYPADRAHRMPIITPAYPSMCATH 320
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V+ T +MTE+F+ + I +++ + KA WS LF + FF Y YLQV +
Sbjct: 321 NVTQSTQMIMTEEFKKASEIVDKVIINKASWSDLFARHDFFHKYRYYLQVIASTGSPELQ 380
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
+ W G VESR RQL +K+E L HP+
Sbjct: 381 VKWSGTVESRVRQLVMKLEY-VESLALAHPF 410
>gi|297695842|ref|XP_002825134.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Pongo abelii]
Length = 497
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 137/293 (46%), Gaps = 17/293 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRK--NPKDRSHRMPIITPAYHCMNS 59
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS
Sbjct: 18 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVSVNPSDRYHLMPIITPAYPQQNS 77
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
+Y VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 78 TYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEK 137
Query: 120 DLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 176
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 138 QRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKK 197
Query: 177 VGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWH 233
S+ +D Q R N ++ I +V R+ L +
Sbjct: 198 TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL-------- 249
Query: 234 RPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
P+ ++ E VK+ S L ++ + P + K + ++S
Sbjct: 250 -PNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNS 301
>gi|343427736|emb|CBQ71262.1| probable PAP1-poly(A) polymerase [Sporisorium reilianum SRZ2]
Length = 658
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 87/139 (62%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW+WP PV++ IE G L VW+P+ P DR HRMPIITPAY M +++
Sbjct: 268 IVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRLHRMPIITPAYPGMCATH 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VMT +F+ + + + +GK WS LF + FF Y+ YLQV + AD
Sbjct: 328 NVSQSTQMVMTSEFKRAAEVVDRVIIGKTHWSELFAKHDFFFKYKYYLQVIASSGSADLQ 387
Query: 122 LTWKGWVESRFRQLTLKIE 140
L W G VES+ RQL +K+E
Sbjct: 388 LKWHGTVESKIRQLVMKLE 406
>gi|357621141|gb|EHJ73080.1| poly a polymerase [Danaus plexippus]
Length = 615
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 134/292 (45%), Gaps = 36/292 (12%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V++QW+WP PV++ P + LGF VWDPR N DR H MPIITPAY NS++
Sbjct: 279 LLHKFFLVFSQWKWPQPVLLKPPDSVNLGFPVWDPRVNMSDRYHLMPIITPAYPQQNSTF 338
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T V+ E+F+ G I +EI LGK W LFE FF Y++++ + +A+ D
Sbjct: 339 NVSSSTRTVIMEEFRLGLAITDEIMLGKCGWERLFEAANFFSRYKHFIVLLASSANTLDQ 398
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY--------------IDPSKPCPN-- 165
L W G VES+ R L +E++ + + H P Y + P P
Sbjct: 399 LPWCGLVESKIRHLITTLERNQH-ITIAHVNPECYNSVPLNTNNGHPLALPPGTPVQTEE 457
Query: 166 ------------------SAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRRE 207
S +F GL + + + +D K +N V RE
Sbjct: 458 HGAAEVKNDKGEIVANVCSMWFIGLVFDKTNVNVDL-TYDISSFTKAVHYQAENTNVLRE 516
Query: 208 GRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFNEQSGKPCEDVKMCQSCSSE 259
G I +V R+ L ++ P + + ++ NE + K S++
Sbjct: 517 GMTIEARHVRRKQLHQYLSPSLLRREKVNKRKNETLAVHTKKAKRVSESSAD 568
>gi|157109674|ref|XP_001650777.1| poly a polymerase [Aedes aegypti]
gi|108878961|gb|EAT43186.1| AAEL005356-PA [Aedes aegypti]
Length = 780
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 130/251 (51%), Gaps = 23/251 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WP PV++ + LGF VWDPR N +DR H MPIITPAY NS++
Sbjct: 336 LVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQNSTF 395
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +VM +F G +I +EI L KA W LFE FF Y +++ + + + +ADD
Sbjct: 396 NVSSSTRKVMLNEFNRGMQITDEIMLSKAGWDKLFEAPSFFFKYRHFIVLLVTSNNADDH 455
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYP-------------NKYIDPSKPCPN-SA 167
L W G VES+ R L L +E++ + L H P + D S+ S
Sbjct: 456 LEWCGLVESKIRYLILNLERNQHINL-AHVNPKCFEQHEQNQTERQRESDGSRASTLCSL 514
Query: 168 FFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVR----REGRDIYFSYVCRRHLPS 223
+F GL + E D ++++F + + V ++G I +V R+ L
Sbjct: 515 WFIGLEFER----SENLNVDLTESIQSFTDSVHKHAVHIKLLKDGMKIEARHVRRKQLSQ 570
Query: 224 FVFPDGYKWHR 234
++ P+ K R
Sbjct: 571 YLDPNLLKRER 581
>gi|67972178|dbj|BAE02431.1| unnamed protein product [Macaca fascicularis]
Length = 637
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 129/269 (47%), Gaps = 14/269 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 388
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--GLSRKE 176
L W G VES+ R L +E++ L H P + P K P+ F W GL K+
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAP-KENPDMEEFRTMWVIGLVLKK 446
Query: 177 VGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRH----LPSFVFPDG 229
S+ +D Q R N ++ G I ++ R+ LP V D
Sbjct: 447 PENSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKELHQLLPHHVLQDK 506
Query: 230 YKWHRPSRHFNEQSGKPCEDVKMCQSCSS 258
SR + + + C++ S
Sbjct: 507 KAQATESRRLTDLNDNSFDLSAGCENSMS 535
>gi|395845544|ref|XP_003804110.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase beta [Otolemur
garnettii]
Length = 637
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 117/233 (50%), Gaps = 7/233 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 388
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPEKEEFRTMWVIGLVLKKPE 448
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 228
S+ +D Q R N ++ I ++ R+ L PD
Sbjct: 449 NSEILSIDLTYDIQSFTDTVYRQAINTKMFEMDMKIAAMHLKRKELHQL-LPD 500
>gi|126139251|ref|XP_001386148.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
gi|126093430|gb|ABN68119.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
Length = 556
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 95/159 (59%), Gaps = 2/159 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +YT+W WP PV++ PIE G L VW+PR DR HRMP+ITPAY M ++
Sbjct: 253 VIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYANDRLHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYL-QVDIVAADAD 119
+ ++ T +V+ + + G + +I LGK WS LF+ + FF Y+ YL V A +
Sbjct: 313 HNITSSTQKVILSELEKGAEVVRQINLGKKSWSDLFDRHDFFHHYKFYLCVVAATVASDE 372
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID 158
+ L W G +ES+ R L LK+E T G+ HPY + D
Sbjct: 373 EHLKWTGLIESKLRHLVLKLEV-TEGVELAHPYVKDFSD 410
>gi|302564155|ref|NP_001181787.1| poly(A) polymerase beta [Macaca mulatta]
Length = 637
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 117/228 (51%), Gaps = 10/228 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 388
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--GLSRKE 176
L W G VES+ R L +E++ L H P + P K P+ F W GL K+
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAP-KENPDMEEFRTMWVIGLVLKK 446
Query: 177 VGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ G I ++ R+ L
Sbjct: 447 PENSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKEL 494
>gi|402862797|ref|XP_003895729.1| PREDICTED: poly(A) polymerase beta [Papio anubis]
Length = 637
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 117/228 (51%), Gaps = 10/228 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 388
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--GLSRKE 176
L W G VES+ R L +E++ L H P + P K P+ F W GL K+
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAP-KENPDMEEFRTMWVIGLVLKK 446
Query: 177 VGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ G I ++ R+ L
Sbjct: 447 PENSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKEL 494
>gi|405945155|gb|EKC17170.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 745
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 119/232 (51%), Gaps = 6/232 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI---EMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
L+ +FF + +W WP PV++ + L F VWDPR N DR H MPIITPAY N
Sbjct: 266 LLHKFFMIIHKWNWPQPVLLKALVHENKFNLSFPVWDPRVNTSDRFHLMPIITPAYPQQN 325
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADA 118
S++ V+L T +MTE+ + G I +I G+ EW ALFE FF+ Y++Y+ + A +
Sbjct: 326 STFNVTLSTRSIMTEELKDGLEIVSKIYEGREEWGALFEPSNFFQKYKHYIVLTASAVEE 385
Query: 119 DDLLTWKGWVESRFRQLTLKIEQDT-NGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEV 177
D L W G+VES+ R L +E++ L HP P ++ S +F GL+ ++
Sbjct: 386 KDYLEWHGYVESKIRLLVGNLERNPCIKLAHVHPSPLGPLNESDGEYLCRWFIGLTFVKI 445
Query: 178 GTSKECQQ--FDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFP 227
+ FD Q + + + ++G + +V RR L +V P
Sbjct: 446 ENQNQNVDLTFDIQSFTNTVHKHAYHINLMKDGMKVEIKHVKRRQLDLYVPP 497
>gi|426254899|ref|XP_004021112.1| PREDICTED: poly(A) polymerase beta [Ovis aries]
Length = 639
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 139/307 (45%), Gaps = 20/307 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 388
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P P K + + GL K+
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEEFRTMWVIGLVLKKPE 448
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRP 235
S+ +D Q R N ++ I ++ R+ L + P
Sbjct: 449 NSEVLSIDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHLKRKELHQLL---------P 499
Query: 236 SRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSPG 295
+ ++ E V++ + R L E P S+ A + VP +PG
Sbjct: 500 NHVLQKKKTLSTEGVRLTALDAGSRDLSVGSESS----TPVSSLPAASQTGPVPGS-APG 554
Query: 296 MTTEDPT 302
+ P
Sbjct: 555 GNSRGPA 561
>gi|116283528|gb|AAH16738.1| PAPOLG protein [Homo sapiens]
Length = 496
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 115/221 (52%), Gaps = 6/221 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P S +F G+ + V
Sbjct: 387 LEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRRVE 446
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYV 216
++ +D Q R +N + +EG I ++V
Sbjct: 447 NAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHV 487
>gi|71023817|ref|XP_762138.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
gi|46101730|gb|EAK86963.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
Length = 667
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 86/139 (61%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW+WP PV++ IE G L VW+P+ P DR HRMPIITPAY M +++
Sbjct: 268 IVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRLHRMPIITPAYPGMCATH 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VMT +F+ + + + +GK W LF + FF Y+ YLQV + AD
Sbjct: 328 NVSQSTQMVMTSEFKRAAEVVDRVIIGKTNWDELFAKHDFFFKYKYYLQVIASSGSADLQ 387
Query: 122 LTWKGWVESRFRQLTLKIE 140
L W G VES+ RQL +K+E
Sbjct: 388 LKWHGTVESKIRQLVMKLE 406
>gi|311250845|ref|XP_003124320.1| PREDICTED: poly(A) polymerase beta-like [Sus scrofa]
Length = 640
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 87/141 (61%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIALLASAPTEKQH 387
Query: 122 LTWKGWVESRFRQLTLKIEQD 142
L W G VES+ R L +E++
Sbjct: 388 LEWVGLVESKIRILVGSLEKN 408
>gi|354473991|ref|XP_003499215.1| PREDICTED: poly(A) polymerase gamma [Cricetulus griseus]
Length = 739
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 119/229 (51%), Gaps = 12/229 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSA------FFWGLSRK 175
L W G VES+ R L +E++ + H P + P N A +F G+ +
Sbjct: 387 LEWVGLVESKIRVLVGNLERN-EFITLAHVNPQSF--PGNKEHNKANNYVSMWFLGIIFR 443
Query: 176 EVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
V ++ +D Q R + + ++G I ++V ++ L
Sbjct: 444 RVEHAEGVNIDLTYDIQSFTDTVYRQANIINMLKDGMKIEATHVKKKQL 492
>gi|312381415|gb|EFR27171.1| hypothetical protein AND_06288 [Anopheles darlingi]
Length = 1653
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 127/252 (50%), Gaps = 25/252 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WP PV++ + LGF VWDPR N +DR H MPIITPAY NS++
Sbjct: 330 LVHKFFLVFSRWKWPQPVLLKQPDNVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQNSTF 389
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +VM +F G +I ++I +GK W LFE FF Y +++ + + +++ADD
Sbjct: 390 NVSSSTRKVMLMEFNRGMQITDDIMMGKQMWDKLFEAPSFFYRYRHFIVLLVTSSNADDH 449
Query: 122 LTWKGWVESRFRQLTLKI-------------------EQDTNGLLQCHPYPNKYIDPSKP 162
L W G VES+ R L + EQ+ L + P+
Sbjct: 450 LEWCGLVESKIRYLIQNLERNQHINLAHVNPKCYEQHEQNPAATLNAGGGADANQTPAAF 509
Query: 163 CPNSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLP 222
C S +F GL + E D ++++F + + + ++G I +V R+ L
Sbjct: 510 C--SLWFIGLEFERT----ENLNVDLTESIQSFTDSVHKHALLKDGMKIEARHVRRKQLA 563
Query: 223 SFVFPDGYKWHR 234
S++ + K R
Sbjct: 564 SYLDANLLKRER 575
>gi|344245697|gb|EGW01801.1| Poly(A) polymerase gamma [Cricetulus griseus]
Length = 709
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 119/229 (51%), Gaps = 12/229 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 259 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 318
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 319 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 378
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSA------FFWGLSRK 175
L W G VES+ R L +E++ + H P + P N A +F G+ +
Sbjct: 379 LEWVGLVESKIRVLVGNLERN-EFITLAHVNPQSF--PGNKEHNKANNYVSMWFLGIIFR 435
Query: 176 EVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
V ++ +D Q R + + ++G I ++V ++ L
Sbjct: 436 RVEHAEGVNIDLTYDIQSFTDTVYRQANIINMLKDGMKIEATHVKKKQL 484
>gi|213406289|ref|XP_002173916.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
gi|212001963|gb|EEB07623.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
Length = 563
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 90/152 (59%), Gaps = 1/152 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++VS+FFR+ +QW WP PV++ PI+ G L VW+P+ P D++HRMPIITPAY M ++
Sbjct: 253 VIVSKFFRILSQWNWPQPVLLKPIDDGPLQVRVWNPKLYPSDKAHRMPIITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ ++ T V+ + I ++I GK WSALFE + FF Y YL V + AD
Sbjct: 313 HNITPSTQTVILREMARAGLIVDDIMAGKKPWSALFEKHDFFHRYRYYLTVTAASKTADS 372
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
L W G VES+ R ++E + + HP+
Sbjct: 373 QLKWSGLVESKLRHFVTRLEL-VDAITLAHPF 403
>gi|347969786|ref|XP_003436462.1| AGAP013207-PA [Anopheles gambiae str. PEST]
gi|333469270|gb|EGK97235.1| AGAP013207-PA [Anopheles gambiae str. PEST]
Length = 725
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 130/250 (52%), Gaps = 22/250 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WP PV++ + LGF VWDPR N +DR H MPIITPAY NS++
Sbjct: 270 LVHKFFLVFSRWKWPQPVLLKQPDNVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQNSTF 329
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +VM +F G +I ++I +GK W LFE FF Y +++ + + +++ADD
Sbjct: 330 NVSSSTRKVMLMEFNRGMQITDDIMMGKQMWEKLFEAPSFFYRYRHFIVLLVTSSNADDH 389
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID------------PSKPCPN-SAF 168
L W G VES+ R L +E++ + L H P Y KP P S +
Sbjct: 390 LEWCGLVESKIRYLIQNLERNQHINL-AHVNPKCYEQHEQNSATTLNGADGKPTPFCSLW 448
Query: 169 FWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVR----REGRDIYFSYVCRRHLPSF 224
F GL + E D ++++F + + V ++G I +V R+ L +
Sbjct: 449 FIGLEFER----SENLNVDLTESIQSFTDSVHKHAVHIKLLKDGMKIEARHVRRKQLTQY 504
Query: 225 VFPDGYKWHR 234
+ P+ K R
Sbjct: 505 LDPNLLKRER 514
>gi|320583027|gb|EFW97243.1| poly(A) polymerase isozyme [Ogataea parapolymorpha DL-1]
Length = 1547
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 96/153 (62%), Gaps = 2/153 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++VS+FF++Y QW+WP PV++ PIE G L +W+P+ +DR HRMP+ITPAY M ++
Sbjct: 1215 VIVSKFFQIYLQWKWPQPVLLKPIEDGPLPVRIWNPKLYGQDRLHRMPVITPAYPSMCAT 1274
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADA-D 119
+ ++ T +++ ++ Q G I +I+ GK W LF + FF AY+ YL V D+ +
Sbjct: 1275 HNITASTQKIILKEMQRGLEIMNDIQFGKRTWKDLFAKHDFFFAYKFYLTVITATRDSYE 1334
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
L W G VES+ R L K+E NG++ HPY
Sbjct: 1335 AHLKWSGMVESKLRLLVQKLEV-VNGIVLAHPY 1366
>gi|66357032|ref|XP_625694.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
gi|46226666|gb|EAK87645.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
Length = 699
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 101/158 (63%), Gaps = 8/158 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM------GELGFSVWDPRKNPKDRSHRMPIITPAYH 55
+++RFF +Y W+W NPV++C I+ G +GF VW+P NP+DR+H MPIITPA+
Sbjct: 268 IINRFFYIYKTWQWKNPVILCEIKEVPKNTPGLMGFRVWNPNLNPQDRAHVMPIITPAFP 327
Query: 56 CMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 115
MNS++ V+ TL V+T++ Q RI ++IE KA W ++ + FFE +++++QV +++
Sbjct: 328 SMNSTHNVTHTTLGVITDELQRAYRIIQDIENDKATWHDVWSPFLFFEKHKHFIQVKMLS 387
Query: 116 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYP 153
+ W GW+ES+ R L K+E T LQ P+P
Sbjct: 388 NNEQAFHKWIGWIESKLRFLVRKLE--TFKGLQVRPWP 423
>gi|68482706|ref|XP_714750.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
gi|3334283|sp|O42617.1|PAP_CANAL RecName: Full=Poly(A) polymerase PAPalpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|2696030|dbj|BAA23802.1| poly A polymerase [Candida albicans]
gi|5771514|gb|AAD51412.1| unknown [Candida albicans]
gi|46436342|gb|EAK95706.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
Length = 558
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 95/156 (60%), Gaps = 2/156 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF +YT+W WP PV++ IE G L VW+PR P DR HRMP+ITPAY M +++
Sbjct: 254 IVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCATH 313
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAAD-ADD 120
++ T +V+ + G+ I +EI GK WS LFE + FF Y+ YL V + D A++
Sbjct: 314 NITSSTQKVILAELSRGSSIMQEIHAGKKTWSDLFEKHSFFYKYKFYLCVVAASIDSAEE 373
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G++ES+ RQL LK+E G+ HPY +
Sbjct: 374 HKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDF 408
>gi|195151552|ref|XP_002016711.1| GL11728 [Drosophila persimilis]
gi|194110558|gb|EDW32601.1| GL11728 [Drosophila persimilis]
Length = 904
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 130/267 (48%), Gaps = 37/267 (13%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 289 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 348
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +VM +F G I +EI LG+A W LFE FF Y +++ + + + ADD
Sbjct: 349 NVSESTKKVMLTEFTRGMNITDEIMLGRASWERLFEAPSFFYRYRHFIVLLVNSQTADDH 408
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY------------------IDPSKPC 163
L W G VES+ R L +E++ + L H P + D +P
Sbjct: 409 LEWCGLVESKIRLLIGNLERNPHIAL-AHVNPKCFELKKGESANNSQNNSGNEDDLKQPP 467
Query: 164 PNSA----------FFWGLSRKEVGTSKECQQFDFQGTVKNFRRGID----NYRVRREGR 209
PN A +F GL + E D +++NF + N ++ +EG
Sbjct: 468 PNQASVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFTEHVIMHGVNIKMLKEGM 523
Query: 210 DIYFSYVCRRHLPSFVFPDGYKWHRPS 236
I +V R+ L ++ D K R S
Sbjct: 524 AIDARHVKRKQLTVYLDADFLKRERKS 550
>gi|238882575|gb|EEQ46213.1| Poly(A) polymerase [Candida albicans WO-1]
Length = 558
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 95/156 (60%), Gaps = 2/156 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF +YT+W WP PV++ IE G L VW+PR P DR HRMP+ITPAY M +++
Sbjct: 254 IVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCATH 313
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAAD-ADD 120
++ T +V+ + G+ I +EI GK WS LFE + FF Y+ YL V + D A++
Sbjct: 314 NITSSTQKVILAELSRGSSIMQEIHAGKKTWSDLFEKHSFFYKYKFYLCVVAASIDSAEE 373
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G++ES+ RQL LK+E G+ HPY +
Sbjct: 374 HKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDF 408
>gi|198459613|ref|XP_001361433.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
gi|198136742|gb|EAL26011.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
Length = 902
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 130/267 (48%), Gaps = 37/267 (13%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 288 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 347
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +VM +F G I +EI LG+A W LFE FF Y +++ + + + ADD
Sbjct: 348 NVSESTKKVMLTEFTRGMNITDEIMLGRASWERLFEAPSFFYRYRHFIVLLVNSQTADDH 407
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY------------------IDPSKPC 163
L W G VES+ R L +E++ + L H P + D +P
Sbjct: 408 LEWCGLVESKIRLLIGNLERNPHIAL-AHVNPKCFELKKGESANNSQNNSGNEDDLKQPP 466
Query: 164 PNSA----------FFWGLSRKEVGTSKECQQFDFQGTVKNFRRGID----NYRVRREGR 209
PN A +F GL + E D +++NF + N ++ +EG
Sbjct: 467 PNQASVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFTEHVIMHGVNIKMLKEGM 522
Query: 210 DIYFSYVCRRHLPSFVFPDGYKWHRPS 236
I +V R+ L ++ D K R S
Sbjct: 523 AIDARHVKRKQLTVYLDADFLKRERKS 549
>gi|330340378|ref|NP_001193351.1| poly(A) polymerase beta [Bos taurus]
Length = 642
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 114/226 (50%), Gaps = 6/226 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR +P DR H MPIITPAY NS+Y
Sbjct: 269 LVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVSPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E+F+ G I EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 329 NVSVSTRMVMIEEFKQGLAITHEILLSKAEWSKLFEAPSFFQKYKHYIVLLASAPTEKQH 388
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P P K + + GL K+
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEEFRTMWVIGLVLKKPE 448
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ I ++ R+ L
Sbjct: 449 NSEVLSIDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHLKRKEL 494
>gi|340376009|ref|XP_003386526.1| PREDICTED: poly(A) polymerase gamma-like [Amphimedon queenslandica]
Length = 689
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 120/237 (50%), Gaps = 14/237 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFS--VWDPRKNPKDRSHRMPIITPAYHCMNS 59
+V +FF V+ +W WP PV++ E LG + VW+P+ NP D H MPIITPAY NS
Sbjct: 258 IVLKFFFVFEKWNWPQPVLLRKAEEDVLGLNLQVWNPQVNPGDAHHLMPIITPAYPQQNS 317
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
++ V+ T VM +F+ G IC +I++GK W LFE FF Y++Y+ + A D+D
Sbjct: 318 TFNVTKSTRDVMLNEFRRGLDICRDIDVGKLSWDILFEPIKFFSLYKHYIVICATAIDSD 377
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY--IDPSKPCPNSAFFWGL----- 172
LL W G VES+ R L K+E + N + H P Y I P + +F GL
Sbjct: 378 LLLKWSGLVESKIRILIGKLEDNEN-IKIAHVNPTSYPRIVPDSTDSHLMWFIGLEFCVG 436
Query: 173 -SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 228
+ + E Q F VK+ + + R G + + RR L ++ PD
Sbjct: 437 PGGVNITLTYEIQMF-INSVVKS--PALQSSPDLRNGTQLDVKHARRRDLSDYLSPD 490
>gi|190347092|gb|EDK39304.2| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 94/159 (59%), Gaps = 2/159 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +Y+QW WP PV++ IE G L VW+PR P DRSHRMP+ITPAY M ++
Sbjct: 253 VIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRSHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYL-QVDIVAADAD 119
+ ++ T ++ +F+ G I +I +GK EW LF + FF Y+ YL V A+
Sbjct: 313 HNITSSTQAIIVSEFKRGAEIMNDISIGKKEWGDLFARHEFFFRYKFYLCVVASTKGSAE 372
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID 158
+ L W G VES+ R L K+E T G+ HPY + D
Sbjct: 373 EHLKWSGMVESKLRILVQKLEL-TEGITIAHPYVKTFED 410
>gi|19112154|ref|NP_595362.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe 972h-]
gi|26397523|sp|Q10295.1|PAP_SCHPO RecName: Full=Poly(A) polymerase pla1; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|1419256|emb|CAA56141.1| polymerase [Schizosaccharomyces pombe]
gi|4160340|emb|CAA22808.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe]
Length = 566
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 96/163 (58%), Gaps = 2/163 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FFR+ QW WP P+++ PIE G L +W+P+ P D++HRMPIITPAY M ++
Sbjct: 253 VIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMPIITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ ++L T ++ + I ++I + WSALF+ + FF Y++YL + A A+
Sbjct: 313 HNITLSTQTIILREMVRAGEIADQIMVKALPWSALFQKHDFFHRYKHYLTITAAAKTAEA 372
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPC 163
L W G VES+ R L ++E + + HP+ NK D C
Sbjct: 373 QLKWAGLVESKLRHLVTRLEL-VDAIALAHPF-NKGFDKVYNC 413
>gi|255732153|ref|XP_002551000.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
gi|240131286|gb|EER30846.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
Length = 558
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 95/153 (62%), Gaps = 2/153 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +YT+W WP PV++ IE G L VW+PR P DR HRMP+ITPAY M ++
Sbjct: 254 VIVEKFFSIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAAD-AD 119
+ ++ T +V+ ++ G+ I +I G WS LF+ + +F AY+ YL V D ++
Sbjct: 314 HNITSSTQKVILKELSRGSSIMNDINTGNKTWSDLFKRHEYFHAYKFYLCVVAATVDTSE 373
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
W G+VESR RQL LK+E T+G+ HPY
Sbjct: 374 QHKKWSGFVESRLRQLVLKLEV-TDGIEFAHPY 405
>gi|430811842|emb|CCJ30698.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 639
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 115/217 (52%), Gaps = 4/217 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++++FFR+ +QW+WP PV++ PIE G L VW+P+ D++HRMPIITPAY M S+
Sbjct: 309 VVIAKFFRILSQWKWPQPVLLKPIEDGPLQVRVWNPKIYKGDQAHRMPIITPAYPSMCST 368
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ ++ T +V+ + I ++I G WS LF + FF Y+ YL + + A+
Sbjct: 369 HNITESTQKVIINEMNRAGDIADKILNGTLPWSTLFAKHTFFHQYKYYLVIVAASKSAEM 428
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L W G VES+ RQL L++E + + HP+ NK D C G++ E+ S
Sbjct: 429 QLKWSGLVESKVRQLVLRLEY-VDEIKLAHPF-NKSTDSLHYCKTEEEANGVAHGEL-VS 485
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVC 217
+ + Q T+K N ++ D+ YV
Sbjct: 486 TRMENINMQQTIKEM-ESTSNMDMKNSQSDMILVYVT 521
>gi|242212591|ref|XP_002472128.1| predicted protein [Postia placenta Mad-698-R]
gi|220728772|gb|EED82659.1| predicted protein [Postia placenta Mad-698-R]
Length = 438
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 94/167 (56%), Gaps = 17/167 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + QW WP PV++ IE G L VW+P+ P DR+HRMPIITPAY M +++
Sbjct: 165 IVSRFFIIMYQWTWPQPVLLKQIEEGPLPVRVWNPKLYPADRAHRMPIITPAYPSMCATH 224
Query: 62 KVSLGTLQVMTEQFQ----------------CGNRICEEIELGKAEWSALFEHYPFFEAY 105
V+ T +MTE+F+ G+ I + + +G A+WS LF + FF Y
Sbjct: 225 NVTASTQMIMTEEFKKGQLEFYSPGRYLLFLAGSEIVDRVIVGSADWSELFSKHDFFHKY 284
Query: 106 ENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
YLQV ++ + W G VESR RQL +K+E + L HP+
Sbjct: 285 RYYLQVIASTGSSELQIKWAGTVESRIRQLVMKLEY-VDSLTLAHPF 330
>gi|294657491|ref|XP_459799.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
gi|199432733|emb|CAG88038.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
Length = 571
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 101/170 (59%), Gaps = 7/170 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +Y QW WP PV++ PIE G L VW+P+ P DR HRMP+ITPAY M ++
Sbjct: 253 VIVEKFFHIYAQWSWPQPVLLKPIEDGPLQVRVWNPKLYPHDRQHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA---D 117
+ ++ T +++ ++F+ G I +I + K+ WS L + FF Y+ YL IVAA
Sbjct: 313 HNITSSTQKIILDEFKRGIDIMSQISMNKSTWSDLLARHTFFYKYKFYLC--IVAATQGS 370
Query: 118 ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSA 167
++D L W G VESR R L K+E T G+ HPY + + S C N A
Sbjct: 371 SEDHLKWGGMVESRLRLLIQKLEM-TEGIEIAHPYVKPF-ENSYACENQA 418
>gi|119359931|dbj|BAF41975.1| testis-specific poly(A) polymerase [Homo sapiens]
Length = 637
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 116/228 (50%), Gaps = 10/228 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV ++F V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 269 LVRKYFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T VM E F+ G I EI L KA WS LFE FF+ Y++Y+ + A+
Sbjct: 329 NVSISTRMVMIEVFKQGLAITHEILLTKAVWSKLFEAPSFFQKYKHYIVLLASASTEKQH 388
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFF---W--GLSRKE 176
L W G VES+ R L +E++ L H P + P K P+ F W GL K+
Sbjct: 389 LEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAP-KENPDMEEFRTMWVIGLGLKK 446
Query: 177 VGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N ++ G I ++ R+ L
Sbjct: 447 PDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEMGMKITAMHLRRKEL 494
>gi|332226879|ref|XP_003262619.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma [Nomascus
leucogenys]
Length = 735
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 87/141 (61%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTGEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD 142
L W G VES+ R L +E++
Sbjct: 387 LEWVGLVESKIRVLVGNLERN 407
>gi|241955483|ref|XP_002420462.1| poly(A) polymerase, putative; polynucleotide adenylyltransferase,
putative [Candida dubliniensis CD36]
gi|223643804|emb|CAX41541.1| poly(A) polymerase, putative [Candida dubliniensis CD36]
Length = 558
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 95/157 (60%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +YT+W WP PV++ IE G L VW+PR P DR HRMP+ITPAY M ++
Sbjct: 253 VIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAAD-AD 119
+ ++ T +V+ + G+ I ++I GK WS LFE + FF Y+ YL V D A+
Sbjct: 313 HNITSSTQKVILAELSRGSSIMQDIHAGKKSWSDLFEKHCFFYKYKFYLCVVAATIDSAE 372
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
+ W G++ES+ RQL LK+E G+ HPY +
Sbjct: 373 EHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDF 408
>gi|120952595|ref|NP_991321.2| poly(A) polymerase alpha [Danio rerio]
Length = 723
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 126/268 (47%), Gaps = 10/268 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR P DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +M E+F+ G I +EI KA+WS LFE FF+ Y++Y+ + A
Sbjct: 327 NVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFFQKYKHYIVLLASAQTEKQH 386
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--FW--GLSRKEV 177
L W G VES+ R L +E++ + H P + P + F W G+ K++
Sbjct: 387 LEWVGLVESKIRILVGNLEKN-EFITLAHVNPQSFPGPKEGNDKEEFSTMWVIGIVFKKM 445
Query: 178 GTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHR 234
S+ FD Q R ++ + I +V R+ L P+ HR
Sbjct: 446 EGSENLNVDLTFDIQSFTDTVYRQAITSKMFEQDMKITAMHVKRKQLHQL-LPE-VAIHR 503
Query: 235 PSRHFNEQSGKPCEDVKMCQSCSSERQL 262
R + + D + S S+ +
Sbjct: 504 SKRKHSSDGVRAMNDSNLDLSLDSDNSM 531
>gi|298708409|emb|CBJ48472.1| conserved unknown protein (Partial) [Ectocarpus siliculosus]
Length = 496
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 131/242 (54%), Gaps = 23/242 (9%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIE-MGELGFS---------VWDPRKNPKDRSHRMPII 50
+L+++FF +Y +W+WPN V + ++ + E + VW+P NP+D++H MPII
Sbjct: 254 VLLTKFFLMYHRWKWPNHVSLNELQSLQETNVTEGHPFPLHAVWNPVANPRDKAHLMPII 313
Query: 51 TPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQ 110
TPAY MNSSY V ++++ E+ G RI + I LG A W+ LFE FF +E Y+Q
Sbjct: 314 TPAYPAMNSSYNVGEPQMRLIREEIARGWRITKGISLGIANWANLFERSDFFWRFELYVQ 373
Query: 111 VDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY----PNKYIDPSKP-CPN 165
VDI A A D W GW+ESR R + ++Q +++ +P+ PN Y+ ++
Sbjct: 374 VDISARSAADHRLWFGWIESRMRSFLVCLDQID--MVEAYPFVNPLPNPYLTNAETGAVG 431
Query: 166 SAFFWGLSRKEV--GTSKECQQFDFQGTVKNFRRGID---NYRVRREGRDIYFSYVCRRH 220
++FF GL EV G S D ++F ++ + R RREG ++ V H
Sbjct: 432 NSFFIGLGFPEVANGRSPSGVPVDLTPAWRDFMMRVELWGDRRRRREGMEVDVKAV-NVH 490
Query: 221 LP 222
LP
Sbjct: 491 LP 492
>gi|51900536|gb|AAU13916.1| PAP alpha [Candida dubliniensis]
Length = 360
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 94/153 (61%), Gaps = 2/153 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +YT+W WP PV++ IE G L VW+PR P DR HRMP+ITPAY M ++
Sbjct: 55 VIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCAT 114
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAAD-AD 119
+ ++ T +V+ + G+ I ++I GK WS LFE + FF Y+ YL V D A+
Sbjct: 115 HNITSSTQKVILAELSRGSSIMQDIHAGKKSWSDLFEKHCFFYKYKFYLCVVAATIDSAE 174
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
+ W G++ES+ RQL LK+E G+ HPY
Sbjct: 175 EHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPY 206
>gi|6473835|dbj|BAA87187.1| PolyA polymerase [Schizosaccharomyces pombe]
Length = 204
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 96/163 (58%), Gaps = 2/163 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FFR+ QW WP P+++ PIE G L +W+P+ P D++HRMPIITPAY M ++
Sbjct: 21 VIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMPIITPAYPSMCAT 80
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ ++L T ++ + I ++I + WSALF+ + FF Y++YL + A A+
Sbjct: 81 HNITLSTQTIILREMVRAGEIADQIMVKALPWSALFQKHDFFHRYKHYLTITAAAKTAEA 140
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPC 163
L W G VES+ R L ++E + + HP+ NK D C
Sbjct: 141 QLKWAGLVESKLRHLVTRLEL-VDAIALAHPF-NKGFDKVYNC 181
>gi|195124015|ref|XP_002006489.1| GI18544 [Drosophila mojavensis]
gi|193911557|gb|EDW10424.1| GI18544 [Drosophila mojavensis]
Length = 664
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 128/262 (48%), Gaps = 27/262 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ ++ L F VWDPR N DR H MPIITPAY NS++
Sbjct: 276 LVHKFFLVFSRWKWPNPVLLKHLDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 335
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +V+ +F G I +EI LG+ W LFE FF Y +++ + + + ADD
Sbjct: 336 NVSESTKKVILTEFNRGMSITDEIMLGRVGWDRLFEAPSFFYRYRHFIVLLVNSQTADDH 395
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLL-----QCHPYPNKYIDPSKPCPNSAFFWGL---- 172
L W G VES+ R L +E+ + +L +C + NS L
Sbjct: 396 LEWCGLVESKVRLLIGNLERIPHIVLAHVNPKCFELKKGAATANNSQNNSGNEDDLKQQS 455
Query: 173 SRKEVGTSKECQ--------------QFDFQGTVKNFRRGID----NYRVRREGRDIYFS 214
++ V T+ C D +++NF ++ N ++ +EG I
Sbjct: 456 AQAAVTTAPYCSLWFIGLEFERSENLNIDLTESIQNFTEHVNMHGVNIKMLKEGMSIVAR 515
Query: 215 YVCRRHLPSFVFPDGYKWHRPS 236
+V R+ L ++ D K R S
Sbjct: 516 HVKRKQLSVYLDADFLKRERKS 537
>gi|224004590|ref|XP_002295946.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585978|gb|ACI64663.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 532
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 117/232 (50%), Gaps = 13/232 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM----GELGFSVWDPRKNPKDRSHRMPIITPAYHCM 57
L+ FF+ ++ W+WP PV++ + G VWDP N +D H MPIITP Y M
Sbjct: 239 LLQIFFKTFSTWKWPMPVLLSTQKQRPPEGVNNLPVWDPSSNFRDAKHLMPIITPCYPSM 298
Query: 58 NSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAAD 117
NSSY V L+ + ++F +++C ++ G +W LFE FF+ + NYLQVD VA +
Sbjct: 299 NSSYNVGEPQLRRLRDEFARASKLCSDVAFGTKKWGVLFEWNEFFQQHANYLQVDTVATN 358
Query: 118 ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYP---NKYIDPSKPCPNSAFFWGLSR 174
DD W G E+R R L +E G ++ +P+ ++ D ++FF L
Sbjct: 359 EDDFRAWFGLCEARMRLLIAGLESPGFG-VRAYPFAKFFHRREDGGGGNYIASFFIALR- 416
Query: 175 KEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 226
+ + + D V +F I+++ R D+ V R+ LPSFVF
Sbjct: 417 ----FANKVWKVDLAPLVTDFLTVINSWDGREPTMDLMIRLVSRKDLPSFVF 464
>gi|325190732|emb|CCA25225.1| predicted protein putative [Albugo laibachii Nc14]
Length = 539
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 114/237 (48%), Gaps = 9/237 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCP-IEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
L+ +FF +Y W WPNP+ + P I +LGF W+P+ PKDR H MPIITP Y +NSS
Sbjct: 253 LLIKFFHLYHLWNWPNPLSITPCINPLQLGFPSWNPKVYPKDRLHLMPIITPCYPSINSS 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y V TL VM +F+ + + WS L FF+ Y ++LQV I + D +D
Sbjct: 313 YNVMSSTLDVMKTEFKNASLQVSNVRAKVLSWSELLTEASFFDKYRHFLQVQISSEDEED 372
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY-IDPSKPCPNSAFFWGLSRKEVGT 179
W WVESR R +++E ++ P+ + K S FF L +
Sbjct: 373 FGRWVTWVESRLRTFFIRLE--AIPFVRIRPFARFFNFQELKGAYISWFFVALDFQRPED 430
Query: 180 SKECQQ-----FDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYK 231
++ Q DF V+ F +D + R D+ +V R +P++V Y+
Sbjct: 431 KRQNAQEPELTIDFSDAVRAFANHVDQWEERNSTMDLEVKHVVRSQIPAWVIDATYR 487
>gi|397635329|gb|EJK71816.1| hypothetical protein THAOC_06705 [Thalassiosira oceanica]
Length = 629
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 138/291 (47%), Gaps = 29/291 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGEL------GFSVWDPRKNPKDRSHRMPIITPAYH 55
L+ FF + W WP+PVM+ P + VWDPR+N +D+ H MPIITP Y
Sbjct: 346 LLHLFFETFANWNWPDPVMLTPEASRHVPPRNVDARPVWDPRENYRDKLHVMPIITPCYP 405
Query: 56 CMNSSYKVSLGTLQVMTEQFQCGNRICEEI-------ELGKAEWSALFEHYPFFEAYENY 108
MNSS+ V L+ M ++F+ R+ EI E GK WS+LFE FF + Y
Sbjct: 406 SMNSSFNVGEPGLRRMRDEFRRAARVSREILSGTATGEDGKKGWSSLFERSGFFGQHGAY 465
Query: 109 LQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF 168
L+VD+ A D+ L W G E+R R L +E D ++ +P+ Y +K S+F
Sbjct: 466 LRVDVAATTEDEFLRWFGLCEARMRLLIAGLESDE---IRAYPFARFYRRDTKEEYVSSF 522
Query: 169 FWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 228
F L R G ++ + + V + ++++ R G D+ + R LP FVF D
Sbjct: 523 FVAL-RFASGVDRDVR---WGERVSEYLHVVNSFEGRTAGMDLRLELLKRADLPRFVF-D 577
Query: 229 GYKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSV 279
G S + E V+M + L +K+ +EV P +++
Sbjct: 578 G------SEMLRRDGAEGGEGVRMEARATP--SLATRKKAADREVSPSENI 620
>gi|146416103|ref|XP_001484021.1| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 93/159 (58%), Gaps = 2/159 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +Y+QW WP PV++ IE G L VW+PR P DR HRMP+ITPAY M ++
Sbjct: 253 VIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYL-QVDIVAADAD 119
+ ++ T ++ +F+ G I +I +GK EW LF + FF Y+ YL V A+
Sbjct: 313 HNITSSTQAIIVSEFKRGAEIMNDISIGKKEWGDLFARHEFFFRYKFYLCVVASTKGSAE 372
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID 158
+ L W G VES+ R L K+E T G+ HPY + D
Sbjct: 373 EHLKWSGMVESKLRILVQKLEL-TEGITIAHPYVKTFED 410
>gi|62822283|gb|AAY14832.1| unknown [Homo sapiens]
Length = 465
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 88/141 (62%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD 142
L W G VES+ R L +E++
Sbjct: 387 LEWVGLVESKIRVLVGNLERN 407
>gi|26335223|dbj|BAC31312.1| unnamed protein product [Mus musculus]
gi|74224037|dbj|BAE23879.1| unnamed protein product [Mus musculus]
Length = 429
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 88/141 (62%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++
Sbjct: 327 NVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENH 386
Query: 122 LTWKGWVESRFRQLTLKIEQD 142
L W G VES+ R L +E++
Sbjct: 387 LEWVGLVESKIRVLVGNLERN 407
>gi|241643377|ref|XP_002411054.1| poly(A) polymerase, putative [Ixodes scapularis]
gi|215503685|gb|EEC13179.1| poly(A) polymerase, putative [Ixodes scapularis]
Length = 492
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 115/226 (50%), Gaps = 17/226 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V++QW WP PV++ E +LGF VWDPR N DR H MPIITPAY NS++
Sbjct: 275 LVHKFFLVFSQWPWPKPVLLKQPEENKLGFPVWDPRINVADRFHLMPIITPAYPQQNSTF 334
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T +M ++F+ G I +EI LG+ EW LFE FF Y++++ + +
Sbjct: 335 NVSVSTRTIMRQEFKQGLAITDEIMLGRTEWIKLFEPPNFFGKYKHFIVLMATTMTKEHH 394
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPN-KYIDPSK--PCP------NSAFFWGL 172
L W G VES+ R L +E+ HPY +++P PC S +F GL
Sbjct: 395 LEWYGLVESKIRILISNLER--------HPYIEIAHVNPESFPPCEPDGDKLQSMWFIGL 446
Query: 173 SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCR 218
+ +D + V +R + ++ ++ YV R
Sbjct: 447 QFSKTEHVNVDLTYDIRSFVDTVKRQATAINILKQDMEVDIKYVRR 492
>gi|50557132|ref|XP_505974.1| YALI0F28039p [Yarrowia lipolytica]
gi|49651844|emb|CAG78786.1| YALI0F28039p [Yarrowia lipolytica CLIB122]
Length = 518
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 97/159 (61%), Gaps = 6/159 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++SRFF V +WRWP PV++ IE G L VW+PR +D+ HRMPIITPAY M ++
Sbjct: 252 VILSRFFNVLLRWRWPQPVLLKKIEDGPLQARVWNPRIYSQDKLHRMPIITPAYPSMCAT 311
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAAD--- 117
+ ++ T +V+ + + G +I EI LG+ WSALFE + FF Y+ YL IVAA
Sbjct: 312 HNITASTQKVILRELERGGQILNEIMLGQKPWSALFEKHHFFSDYKYYLS--IVAASKGT 369
Query: 118 ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
A+ L W G+VES+ R L K+E + + HPY +
Sbjct: 370 AEQQLKWSGFVESKLRHLVQKLEL-LDSIELAHPYVKTF 407
>gi|344231415|gb|EGV63297.1| Poly(A) polymerase PAPalpha [Candida tenuis ATCC 10573]
Length = 560
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 98/159 (61%), Gaps = 2/159 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +YT+W WP PV++ PIE G L VW+PR DR+HRMPIITPAY M ++
Sbjct: 253 VIVDKFFNIYTKWNWPQPVLLKPIEDGPLQVKVWNPRLYTNDRNHRMPIITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDI-VAADAD 119
+ ++ T +V+ + G I +I+LGK WS LF+ + FF Y+ YL + + A+ +
Sbjct: 313 HNITSSTQKVILSELVKGVDIVGDIKLGKRTWSDLFQRHDFFFRYKFYLCIVVGTKANEE 372
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID 158
+ W G+VES+ R L K+E T+G+ HPY + D
Sbjct: 373 EHSKWSGFVESKLRLLVQKLEA-TSGIEIAHPYVKDFND 410
>gi|391336102|ref|XP_003742422.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 576
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 137/315 (43%), Gaps = 53/315 (16%)
Query: 1 MLVSRFFRVYTQWRWPNPVMM---CPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCM 57
++V +FF V++QW WP PV + GFSVWD R N DR H MPIITP Y
Sbjct: 264 VVVQKFFLVFSQWPWPKPVHLRTQTAAHQHLGGFSVWDSRTNVADRYHLMPIITPVYPEQ 323
Query: 58 NSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAAD 117
NS++ SL T +MT+ F+ G + E I GK W LF FF Y+ ++ + VA
Sbjct: 324 NSTFNTSLSTRTIMTKAFKEGLAVTENILKGKGTWHDLFSPPEFFGQYKTFIMLTAVANT 383
Query: 118 ADDLLTWKGWVESRFRQLTLKIE-------------------------------QDTNGL 146
+DLLTW G VES+ R L + +E Q+ +
Sbjct: 384 KEDLLTWYGLVESKIRTLIISLERVPCIEIAHVNPKSYNKVKEDKPPAEPVKEQQEESPK 443
Query: 147 LQCHPYPNKYIDPSKPCPNSA-----FFWGLSRKEVGTSKECQQFDFQGTVKNFR----R 197
PN+ + ++P P +F GL G +KE D V+N R R
Sbjct: 444 ASAETEPNETEEKAEPKPQEETEGVNWFIGL---HFGQTKEKLNLDLTENVRNLRDVIFR 500
Query: 198 GIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFNEQSGKPCEDVKMCQSCS 257
+N ++ ++G D+ + RR L + + P+ P + K E+ S
Sbjct: 501 QAENIKILKDGMDVEVRVLKRRDLATVLPPEEVALLPPPEKKRKSIRKASEE-------S 553
Query: 258 SERQLKRKKEHEIKE 272
+E KR KE + E
Sbjct: 554 AENPSKRIKEDDAPE 568
>gi|358059327|dbj|GAA94903.1| hypothetical protein E5Q_01558 [Mixia osmundae IAM 14324]
Length = 618
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 10/206 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++SRFF ++ W+WP PV++ P++ G L VW+P N DR H+MP+ITPAY M S++
Sbjct: 255 ILSRFFHIFLLWQWPEPVLLTPLKQGPLNVRVWNPHVNSADRMHKMPVITPAYPSMCSTH 314
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
+S ++ V+ +++ G I I +G+ W+ LFE FF Y YLQ+ + D D+
Sbjct: 315 NISHSSMAVIKAEWERGENIVNRIAVGQTTWAELFEPTDFFYKYRYYLQITASSQDMDNQ 374
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN----SAFFWGLSRKEV 177
L W G VES+ R L +E G+ H Y +++ + + C G S E+
Sbjct: 375 LKWSGTVESKLRTLGANLE-GAEGVTLAHIYVDEF-EKTYSCKTEEEVKLVASGASTPEI 432
Query: 178 GTSKECQQFDFQGTVK----NFRRGI 199
E D +G VK NF G+
Sbjct: 433 SARTEDDIKDVEGAVKLHTSNFYIGL 458
>gi|198433414|ref|XP_002124981.1| PREDICTED: similar to Poly(A) polymerase gamma (PAP-gamma)
(Polynucleotide adenylyltransferase gamma) (SRP RNA
3-adenylating enzyme) (Neo-poly(A) polymerase) (Neo-PAP)
[Ciona intestinalis]
Length = 833
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 113/230 (49%), Gaps = 6/230 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMM-CPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
LV RFF V++QW WP PV++ P E L VWDPR NP DR H MPIITPAY NS+
Sbjct: 256 LVQRFFWVFSQWEWPRPVLLKQPEESNTLNLPVWDPRYNPSDRLHLMPIITPAYPQQNST 315
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y V+ +L VM +F G R+ EI K+ W L E FF Y++++ + A ++
Sbjct: 316 YNVTRSSLTVMKGEFIDGYRVTAEIHENKSSWLKLLETPNFFNEYKHFIVLMASAESQEN 375
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQ-----CHPYPNKYIDPSKPCPNSAFFWGLSRK 175
W G VES+ R L +E++ L+ +P K D + N F K
Sbjct: 376 FNLWTGLVESKIRILVGYLERNDYILIAHINQTGYPQEVKEKDVTTAYVNRWFLGLRFVK 435
Query: 176 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 225
++ ++ D Q R N +V +EG + +Y R LP ++
Sbjct: 436 DLISTNINLTHDIQAFTDTLHRQAHNSKVFKEGMKVEATYSRRSQLPKYL 485
>gi|388578995|gb|EIM19325.1| Poly(A) polymerase, partial [Wallemia sebi CBS 633.66]
Length = 557
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++++FF + QW+WP+PV++ IE G L VW+P+ P DR+HRMPIITPAY M S++
Sbjct: 255 VIAKFFTILYQWKWPHPVLLKEIEDGPLKVRVWNPKIYPSDRAHRMPIITPAYPSMCSTH 314
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V T +VM ++F+ G I + I G WS LF + FF Y++YLQ+ A+
Sbjct: 315 NVGPSTQEVMRQEFKRGMDILDGIHKGTTTWSQLFNKHEFFSKYKHYLQIIASGQTAESQ 374
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
W G VES+ RQL K+E +G+ HP+
Sbjct: 375 KKWSGAVESKVRQLVSKLEL-VDGIELAHPF 404
>gi|328772740|gb|EGF82778.1| hypothetical protein BATDEDRAFT_9489 [Batrachochytrium
dendrobatidis JAM81]
Length = 556
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 111/190 (58%), Gaps = 2/190 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VS+FF++ +W WP PV++ PIE G L VW+P+ P+D++HRMPIITPAY M S++
Sbjct: 273 VVSKFFQIMYRWEWPLPVLLKPIEEGPLAVRVWNPKIYPQDKAHRMPIITPAYPSMCSTH 332
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V++ T V T++F+ ++I LG+ +W+ LF+ FF Y+ YLQV + D +
Sbjct: 333 NVTVSTQTVTTQEFERAAVTTDKIMLGREKWTVLFQKNDFFHRYKYYLQVIASSNDDEKQ 392
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTSK 181
L W G+VESR RQL +K+E N L HPY + D C N ++ + +S
Sbjct: 393 LMWAGFVESRLRQLVMKLELAEN-LDIAHPYIKGF-DKKTMCFNENDQHDVAHGQAPSSS 450
Query: 182 ECQQFDFQGT 191
+ F Q T
Sbjct: 451 DALAFIEQAT 460
>gi|427788767|gb|JAA59835.1| Putative polya polymerase [Rhipicephalus pulchellus]
Length = 817
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 119/233 (51%), Gaps = 17/233 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V++QW WP PV++ E LGF VWDPR N DR H MPIITPAY NS++
Sbjct: 288 LVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVNVADRFHLMPIITPAYPQQNSTF 347
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ TL +M ++F+ G I +EI L +++W LFE FF Y++++ + +
Sbjct: 348 NVSVSTLTIMRQEFKQGLAITDEIMLRRSDWMKLFEPPNFFGKYKHFIVLMASTQSKEHH 407
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY-PNKYIDPSKPCPN--------SAFFWGL 172
L W G VES+ R L +E+ HPY +++P P+ S +F GL
Sbjct: 408 LEWYGLVESKIRILISNLER--------HPYIAIAHVNPESFPPSEPEGDKLQSMWFIGL 459
Query: 173 SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 225
+ +D + V +R + ++ ++ YV RR L ++
Sbjct: 460 QFNKTEHVNIDLTYDTRSFVDTVKRQATAINIFKQDMEVDIKYVRRRELVRYL 512
>gi|294460282|gb|ADE75723.1| unknown [Picea sitchensis]
Length = 554
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 111/232 (47%), Gaps = 26/232 (11%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLVSRFF +Y W+WP PV + + + DR H MPII P + S
Sbjct: 289 MLVSRFFWIYAHWQWPTPVTLVETQPDH---------ADGSDRHHHMPIIIPVHPYSCCS 339
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIEL------GKAEWSALFEHYPFFEAYENYLQVDIV 114
Y V+ TLQ + +F G ++E +W+ LFE +PF +YE ++Q+ +
Sbjct: 340 YNVTRSTLQKLKSEFSRGWDAIMKMETKWGTLPNSGDWNILFERFPFCSSYEYFIQIYVT 399
Query: 115 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS- 173
A+D DD +W+GWVESRFR L LK E+ C P P Y D + P+ F WGL
Sbjct: 400 ASDEDDFRSWRGWVESRFRHLLLKFEKLPA---YCDPNPYPYFDKNVKEPHCYFLWGLKL 456
Query: 174 RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 225
RK + D FR + N R G D++ + + R LPSF
Sbjct: 457 RKNISV-------DMADLEDEFRLYLSNGYEGRPGCDVHLTLLNRFQLPSFA 501
>gi|427797219|gb|JAA64061.1| Putative polya polymerase, partial [Rhipicephalus pulchellus]
Length = 759
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 119/233 (51%), Gaps = 17/233 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V++QW WP PV++ E LGF VWDPR N DR H MPIITPAY NS++
Sbjct: 339 LVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVNVADRFHLMPIITPAYPQQNSTF 398
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ TL +M ++F+ G I +EI L +++W LFE FF Y++++ + +
Sbjct: 399 NVSVSTLTIMRQEFKQGLAITDEIMLRRSDWMKLFEPPNFFGKYKHFIVLMASTQSKEHH 458
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY-PNKYIDPSKPCPN--------SAFFWGL 172
L W G VES+ R L +E+ HPY +++P P+ S +F GL
Sbjct: 459 LEWYGLVESKIRILISNLER--------HPYIAIAHVNPESFPPSEPEGDKLQSMWFIGL 510
Query: 173 SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 225
+ +D + V +R + ++ ++ YV RR L ++
Sbjct: 511 QFNKTEHVNIDLTYDTRSFVDTVKRQATAINIFKQDMEVDIKYVRRRELVRYL 563
>gi|156082541|ref|XP_001608755.1| poly(A) polymerase PAP [Babesia bovis T2Bo]
gi|154796004|gb|EDO05187.1| poly(A) polymerase PAP, putative [Babesia bovis]
Length = 512
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 127/246 (51%), Gaps = 25/246 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM-----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ +FFRVY QW W PVM+C I+ G + F VWDPR NP DR H MP+ITPA+
Sbjct: 262 LIQKFFRVYAQWNWKCPVMLCKIKEVPNIPGYMSFKVWDPRNNPTDRQHLMPVITPAFPS 321
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELG---KAEWSALFEHYPFFEAYENYLQVDI 113
MNS++ ++L T +++T++F+ N + + G K W + E F +++++L +++
Sbjct: 322 MNSTHNITLTTKRILTDEFKRANDLLKVNAKGAQMKNIWERVLEKEDMFASHKHFLVIEV 381
Query: 114 VAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHP----YPNKYIDPSKPCPNSAFF 169
+A W+GW+ SR R L KIE N L++ P Y +K D + S F
Sbjct: 382 LATTEHVHGKWEGWIGSRMRFLIKKIETVPNILVRPWPEFFKYEHKEWDYA-----SCVF 436
Query: 170 WGLSRKEVGTSKECQQ-----FDFQGTVKNFRRGIDNYRVRREGRD---IYFSYVCRRHL 221
+G KE + FD + ++K F+ I+++ +D + Y+ L
Sbjct: 437 FGFKCKEPDNKTNSAEPANKTFDMRMSIKGFKEIINSWTEMEAYKDQIAVNIRYLKNSQL 496
Query: 222 PSFVFP 227
P FV P
Sbjct: 497 PHFVNP 502
>gi|367003753|ref|XP_003686610.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
gi|357524911|emb|CCE64176.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
Length = 555
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 96/153 (62%), Gaps = 2/153 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF++ ++W+WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD- 119
+ ++ T +V+ ++F+ G +I +I K W+ LF+ + FF Y+ YL + D
Sbjct: 314 HNITESTKKVILKEFERGMKITNDIFSNKLTWNDLFKKHTFFYDYKFYLTITTATKGTDE 373
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
D L W G VES+ R L LK+E G+ HPY
Sbjct: 374 DHLKWSGLVESKVRLLILKLEA-LPGITLTHPY 405
>gi|260941482|ref|XP_002614907.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
gi|238851330|gb|EEQ40794.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
Length = 557
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 92/152 (60%), Gaps = 2/152 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF +YT+W WP PV++ PIE G L VW+PR P DR HRMP+ITPAY M +++
Sbjct: 254 IVEKFFTIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRQHRMPVITPAYPSMCATH 313
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYL-QVDIVAADADD 120
++ T +V+ ++ + G I + G+ W+ LFE + FF Y+ YL V AD ++
Sbjct: 314 NITSSTQKVIMKELERGAEIMSLVASGEKTWADLFERHSFFHDYKFYLCIVAATLADDEE 373
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
W G +ES+ R L K+E T+G+ HPY
Sbjct: 374 HHKWSGMIESKLRILVQKLEV-TDGIALAHPY 404
>gi|367008660|ref|XP_003678831.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
gi|359746488|emb|CCE89620.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
Length = 582
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 121/222 (54%), Gaps = 10/222 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF++ ++W+WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVA-ADAD 119
+ ++ T +V+ + G RI +I K W+ LF+ + FF Y+ YL V D++
Sbjct: 314 HNITESTKKVILGELGRGIRITNDIFTNKKTWADLFQRHTFFHEYKFYLTVMAATNGDSE 373
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGT 179
L W G VES+ R L LK+E T G+ HPY +KP +A+++ +
Sbjct: 374 QHLKWSGMVESKVRLLVLKLEALT-GIKIAHPY-------TKPF-ETAYYYHNEEERKKI 424
Query: 180 SKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
+ + +K F++ D + + +D+ Y+ ++
Sbjct: 425 VDNYGTYKTEDVLKEFKKVTDENKDDPDVKDLPKVYITTMYI 466
>gi|239835851|gb|ACS29263.1| pap1 [Clavispora lusitaniae]
Length = 547
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 104/195 (53%), Gaps = 20/195 (10%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF++Y+QW WP PV++ IE G L VW+PR P DR HRMP+ITPAY M ++
Sbjct: 253 VIVEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYL-QVDIVAADAD 119
+ ++ T V+ +F G + +I G A W LFE + FF Y+ YL V + +
Sbjct: 313 HNITKSTKDVIMSEFNRGVNVMAQIHAGTASWGLLFERHRFFFQYKFYLCIVAATKSSSA 372
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGT 179
+ L W G +ES+ R L K+E T G+ HPY KP NS VGT
Sbjct: 373 EHLKWSGMIESKVRLLVQKLEL-TEGITLAHPY-------VKPFENSY---------VGT 415
Query: 180 SKECQQ--FDFQGTV 192
S E Q D GT+
Sbjct: 416 SAEHVQQIIDGYGTL 430
>gi|324975487|gb|ADY62671.1| PAPa [Candida metapsilosis]
Length = 547
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 93/157 (59%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +YT+W WP PV++ IE G L VW+PR DR HRMP+ITPAY M ++
Sbjct: 252 VIVEKFFSIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRLHRMPVITPAYPSMCAT 311
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAAD-AD 119
+ ++ T +V+ ++ G + + I G+ WS LFE + FF Y YL V D A+
Sbjct: 312 HNITSSTQKVIIQELLRGASVMKSIFEGEKTWSDLFERHNFFHRYRFYLCVVAATVDSAE 371
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
+ W G+VES+ RQL LK+E T G+ HPY +
Sbjct: 372 EHHKWHGFVESKLRQLVLKLES-TEGIEIAHPYVKDF 407
>gi|324504415|gb|ADY41908.1| Poly(A) polymerase gamma [Ascaris suum]
Length = 560
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 121/241 (50%), Gaps = 28/241 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMM--C-----PIEMGELGFSVWDPRKNPKDRSHRMPIITPAY 54
L+ +FF V+T+W WP+PV++ C P +M VWDPR DR H MPIITPA+
Sbjct: 75 LIQKFFLVFTRWEWPHPVLLKDCDQTPRPPDMQSFQELVWDPRTRSCDRYHLMPIITPAF 134
Query: 55 HCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIV 114
NS++ V+ T QV+ + + G I EI GKAEWS LF+ FF Y++++ + V
Sbjct: 135 PEQNSTFNVTKSTRQVIMNELEEGLAITIEILSGKAEWSKLFDEVNFFSRYKHFIVLLCV 194
Query: 115 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN--------- 165
AA+ +D L W G VES+ R L +E++ L CH P ++ P P P
Sbjct: 195 AANENDQLVWSGLVESKIRHLIGNLERNPCVSL-CHINP-QHFTPISPLPIEISIENPCC 252
Query: 166 SAFFWGLS-----RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRH 220
+F G+ +K + + E QQF+ R D V G + SYV R
Sbjct: 253 QMWFIGMELNKQLKKNIDLTDEIQQFN-----DAVMRAADFQNVYCPGMAVLPSYVRRAD 307
Query: 221 L 221
L
Sbjct: 308 L 308
>gi|406606978|emb|CCH41700.1| poly(A) polymerase [Wickerhamomyces ciferrii]
Length = 572
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 91/153 (59%), Gaps = 2/153 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++VS+FF + TQW WP PV++ PIE G L VW+PR P+DR HRMP+ITPAY M ++
Sbjct: 254 VIVSKFFHILTQWNWPQPVLLKPIEDGPLQVRVWNPRVYPQDRQHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQ-VDIVAADAD 119
+ ++ T +V+ + Q G+ I +I K +W LF + FF Y+ YL + D +
Sbjct: 314 HNITASTQKVILNELQRGSLIMNDIISHKKQWEDLFVKHDFFYKYKFYLNIIAFTRGDDE 373
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
L W G VES+ R L K+E + G+ HPY
Sbjct: 374 QHLKWSGLVESKLRLLVQKLE-NFQGINLAHPY 405
>gi|366987349|ref|XP_003673441.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
gi|342299304|emb|CCC67054.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
Length = 581
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 97/153 (63%), Gaps = 2/153 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF++ ++W+WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD- 119
+ ++ T +V+ E+F G ++ +I K W+ LF+ + FF Y+ YL + + +D
Sbjct: 314 HNITESTKKVILEEFARGIQVTNDIFSNKGTWADLFQKHDFFYKYKFYLTITVSTKGSDE 373
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
+ L W G VES+ R L LK+E G+ HP+
Sbjct: 374 EHLKWSGLVESKTRLLVLKLEA-LAGIKLAHPF 405
>gi|255085208|ref|XP_002505035.1| predicted protein [Micromonas sp. RCC299]
gi|226520304|gb|ACO66293.1| predicted protein [Micromonas sp. RCC299]
Length = 404
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 82/140 (58%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
MLV FF+++ W+W PVM+ PI G VWD R N +R M IITPAY NS+
Sbjct: 242 MLVYSFFQLWDAWQWSTPVMLTPIVDEGHGLRVWDERVNKAERFQLMKIITPAYPAQNST 301
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ V+ TL V+ +F+ G +C E+ + K W +L+E PFF +++YLQV I A DD
Sbjct: 302 FNVTHSTLHVLKNEFKRGREVCAEVLMSKKRWESLWEPLPFFTMHKHYLQVTIAAVSEDD 361
Query: 121 LLTWKGWVESRFRQLTLKIE 140
W+GWV SR R L +E
Sbjct: 362 FKKWEGWVHSRLRMLVQGVE 381
>gi|327262763|ref|XP_003216193.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Anolis carolinensis]
Length = 678
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 118/232 (50%), Gaps = 6/232 (2%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYK 62
V+R + ++ WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 230 VNRCYSSFSFREWPNPVLLKEPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYN 289
Query: 63 VSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLL 122
VS T +M E+F+ G + +EI GK++W L E FF+ Y++Y+ + ++ + L
Sbjct: 290 VSTSTRAIMVEEFKHGLVVADEIFQGKSDWPKLLEPPNFFQKYKHYIVLTASSSTEEHHL 349
Query: 123 TWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGT 179
W G VES+ R L +E++ T + +P P + S +F G+ K+
Sbjct: 350 EWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNRTQPKESDYVSLWFLGIIFKKAEN 409
Query: 180 SKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 228
++ +D Q R +N + +EG I ++V ++ L ++ D
Sbjct: 410 AESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHYYLPAD 461
>gi|194881425|ref|XP_001974840.1| GG20896 [Drosophila erecta]
gi|190658027|gb|EDV55240.1| GG20896 [Drosophila erecta]
Length = 818
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 128/269 (47%), Gaps = 41/269 (15%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 278 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 337
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +V+ +F G I +EI LG+ W LFE FF Y +++ + + + ADD
Sbjct: 338 NVSESTKKVILTEFNRGMNITDEIMLGRISWERLFEAPSFFYRYRHFIVLLVNSQTADDH 397
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYP---------------------------- 153
L W G VES+ R L +E++ + L H P
Sbjct: 398 LEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFRKGQSANNSQNNSGNEDDLKQSQ 456
Query: 154 -NKYIDPSKP-CPNSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGID----NYRVRRE 207
N+ S P C S +F GL + E D +++NF + N ++ +E
Sbjct: 457 GNQSAVTSAPFC--SMWFIGLEFER----SENLNVDLTESIQNFTEHVTMHGVNIKMLKE 510
Query: 208 GRDIYFSYVCRRHLPSFVFPDGYKWHRPS 236
G I +V R+ L ++ D K R S
Sbjct: 511 GMTIDARHVKRKQLSLYLDSDFLKRERKS 539
>gi|410079098|ref|XP_003957130.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
gi|372463715|emb|CCF57995.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
Length = 567
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 96/153 (62%), Gaps = 2/153 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF++ ++W+WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD- 119
+ ++ T +V+ E+F G +I +I K WS LF + FF Y+ YL + +D
Sbjct: 314 HNITDSTKKVILEEFSRGIQITNDIFSSKKSWSDLFNKHEFFYKYKFYLTITASTRASDE 373
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
+ L W G VES+ R L LK+E +G+ HP+
Sbjct: 374 EHLKWSGLVESKVRLLVLKLEA-LSGIKIAHPF 405
>gi|324975502|gb|ADY62684.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 93/157 (59%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +YT+W WP PV++ IE G L VW+PR DR HRMP+ITPAY M ++
Sbjct: 252 VIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRQHRMPVITPAYPSMCAT 311
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYL-QVDIVAADAD 119
+ ++ T +V+ ++ G+ I + I G+ WS LF + FF Y YL V + A+
Sbjct: 312 HNITSSTQKVILQELTRGSNIMKSILEGEKSWSDLFARHDFFHRYRFYLCVVAATSESAE 371
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
+ W G+VES+ RQL +K+E T G+ HPY +
Sbjct: 372 EHHKWHGFVESKLRQLVIKLES-TEGVELAHPYVKDF 407
>gi|17533995|ref|NP_496524.1| Protein F43G6.5 [Caenorhabditis elegans]
gi|5832750|emb|CAA90398.2| Protein F43G6.5 [Caenorhabditis elegans]
Length = 554
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 121/237 (51%), Gaps = 22/237 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI-----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ + F +++ W+WP PV++ I ++ +L VWDPR+N DR H MPI+TPA+
Sbjct: 266 LIQKVFFIFSTWKWPAPVLLDFISSDRMDLAQLNQLVWDPRRNQSDRYHLMPIVTPAFPQ 325
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 116
NS++ VS +++V+ E+ + C+ I+ G W L E FF Y++++ + + A
Sbjct: 326 QNSTHNVSRSSMKVIQEEMKDALITCDNIQNGSCNWMDLLEEINFFSRYKHFISLSMTAE 385
Query: 117 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 176
D L + G+ ESR RQL L +E++ G+ H P K+ P S +F GL E
Sbjct: 386 TEKDELAFGGFFESRIRQLVLILEKN-QGIKLAHINPKKFKAAKDP-KKSVWFIGLQFDE 443
Query: 177 VGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIY--------FSYVCRRHLPSFV 225
+ D ++ F+R ID Y+ + +DI FSYV R L +
Sbjct: 444 -----NVKNLDLTKDIQQFKRNID-YQA-KSVKDIEANCAVETDFSYVKRSDLAQTI 493
>gi|195057028|ref|XP_001995187.1| GH22767 [Drosophila grimshawi]
gi|193899393|gb|EDV98259.1| GH22767 [Drosophila grimshawi]
Length = 857
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 87/141 (61%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 274 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 333
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +V+ +F G I +EI LG+ W LFE FF Y +++ + + + ADD
Sbjct: 334 NVSESTKKVILTEFNRGMSITDEIMLGRVNWDRLFEAPSFFYRYRHFIVLLVNSQTADDH 393
Query: 122 LTWKGWVESRFRQLTLKIEQD 142
L W G VES+ R L +E++
Sbjct: 394 LEWCGLVESKVRLLIGNLERN 414
>gi|324975520|gb|ADY62700.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 93/157 (59%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +YT+W WP PV++ IE G L VW+PR DR HRMP+ITPAY M ++
Sbjct: 252 VIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRQHRMPVITPAYPSMCAT 311
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYL-QVDIVAADAD 119
+ ++ T +V+ ++ G+ I + I G+ WS LF + FF Y YL V + A+
Sbjct: 312 HNITSSTQKVILQELTRGSSIMKSILEGEKSWSDLFARHDFFHRYRFYLCVVAATSESAE 371
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
+ W G+VES+ RQL +K+E T G+ HPY +
Sbjct: 372 EHHKWHGFVESKLRQLVIKLES-TEGVELAHPYVKDF 407
>gi|444321773|ref|XP_004181542.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
gi|387514587|emb|CCH62023.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
Length = 574
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 98/155 (63%), Gaps = 6/155 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF++ +W+WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFKILLEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA---D 117
+ ++ T +V+ ++F+ G ++ +I K W+ LF+ + FF Y+ YL V VA+
Sbjct: 314 HNITDSTKKVILQEFERGVQVTNDIFTNKKTWADLFKKHEFFHKYKFYLTV--VASTRGS 371
Query: 118 ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
+ L W G+VES+ R L LK+E G+ HPY
Sbjct: 372 TEQHLKWSGFVESKLRLLVLKLET-LAGIKLAHPY 405
>gi|194755527|ref|XP_001960043.1| GF13172 [Drosophila ananassae]
gi|190621341|gb|EDV36865.1| GF13172 [Drosophila ananassae]
Length = 835
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 87/141 (61%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 277 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 336
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +V+ +F G I +EI LG+ W LFE FF Y +++ + + + ADD
Sbjct: 337 NVSESTKKVILTEFNRGMNITDEIMLGRIPWDRLFEAPSFFYRYRHFIVLLVNSQTADDH 396
Query: 122 LTWKGWVESRFRQLTLKIEQD 142
L W G VES+ R L +E++
Sbjct: 397 LEWCGLVESKVRLLIGNLERN 417
>gi|239835858|gb|ACS29269.1| pap1 [Meyerozyma guilliermondii]
Length = 564
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 96/160 (60%), Gaps = 4/160 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +YT+W WP PV++ PIE G L VW+PR P DR H+MP+ITPAY M ++
Sbjct: 253 VIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRQHKMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADA-- 118
+ ++ T +V+ + + G+ + +I L W+ LF+ + FF Y+ YL + I A +
Sbjct: 313 HNINSSTQKVIMNELERGSELMAQISLNNKTWADLFQRHDFFHRYKFYLCI-IAATEGTN 371
Query: 119 DDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID 158
++ W G VES+ R L K+E T+G+ HPY + D
Sbjct: 372 EEHSKWSGMVESKLRILIQKLEL-TDGIALAHPYVKDFSD 410
>gi|195335951|ref|XP_002034618.1| GM19819 [Drosophila sechellia]
gi|194126588|gb|EDW48631.1| GM19819 [Drosophila sechellia]
Length = 814
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 87/141 (61%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 276 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 335
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +V+ +F G I +EI LG+ W LFE FF Y +++ + + + ADD
Sbjct: 336 NVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDH 395
Query: 122 LTWKGWVESRFRQLTLKIEQD 142
L W G VES+ R L +E++
Sbjct: 396 LEWCGLVESKVRLLIGNLERN 416
>gi|195584945|ref|XP_002082256.1| GD25311 [Drosophila simulans]
gi|194194265|gb|EDX07841.1| GD25311 [Drosophila simulans]
Length = 815
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 87/141 (61%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 276 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 335
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +V+ +F G I +EI LG+ W LFE FF Y +++ + + + ADD
Sbjct: 336 NVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDH 395
Query: 122 LTWKGWVESRFRQLTLKIEQD 142
L W G VES+ R L +E++
Sbjct: 396 LEWCGLVESKVRLLIGNLERN 416
>gi|195380742|ref|XP_002049128.1| GJ21414 [Drosophila virilis]
gi|194143925|gb|EDW60321.1| GJ21414 [Drosophila virilis]
Length = 880
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 92/152 (60%), Gaps = 1/152 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 287 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFPVWDPRVNASDRYHLMPIITPAYPQQNSTF 346
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +V+ +F G I +EI LG+ W LFE FF Y +++ + + + ADD
Sbjct: 347 NVSESTKKVILTEFNRGMSITDEIMLGRVSWDRLFEAPSFFYRYRHFIVLLVNSQTADDH 406
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYP 153
L W G VES+ R L +E++ + +L H P
Sbjct: 407 LEWCGLVESKVRLLIGNLERNPHIVL-AHVNP 437
>gi|442624286|ref|NP_001261097.1| hiiragi, isoform D [Drosophila melanogaster]
gi|440214537|gb|AGB93629.1| hiiragi, isoform D [Drosophila melanogaster]
Length = 827
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 87/141 (61%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 276 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 335
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +V+ +F G I +EI LG+ W LFE FF Y +++ + + + ADD
Sbjct: 336 NVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDH 395
Query: 122 LTWKGWVESRFRQLTLKIEQD 142
L W G VES+ R L +E++
Sbjct: 396 LEWCGLVESKVRLLIGNLERN 416
>gi|195487053|ref|XP_002091755.1| GE13836 [Drosophila yakuba]
gi|194177856|gb|EDW91467.1| GE13836 [Drosophila yakuba]
Length = 820
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 87/141 (61%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 276 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 335
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +V+ +F G I +EI LG+ W LFE FF Y +++ + + + ADD
Sbjct: 336 NVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDH 395
Query: 122 LTWKGWVESRFRQLTLKIEQD 142
L W G VES+ R L +E++
Sbjct: 396 LEWCGLVESKVRLLIGNLERN 416
>gi|21064419|gb|AAM29439.1| RE25878p [Drosophila melanogaster]
Length = 659
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 87/141 (61%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 276 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 335
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +V+ +F G I +EI LG+ W LFE FF Y +++ + + + ADD
Sbjct: 336 NVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDH 395
Query: 122 LTWKGWVESRFRQLTLKIEQD 142
L W G VES+ R L +E++
Sbjct: 396 LEWCGLVESKVRLLISNLERN 416
>gi|195431638|ref|XP_002063835.1| GK15696 [Drosophila willistoni]
gi|194159920|gb|EDW74821.1| GK15696 [Drosophila willistoni]
Length = 872
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 288 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFPVWDPRVNASDRYHLMPIITPAYPQQNSTF 347
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +V+ +F G I +EI LG+ W LFE FF Y +++ + + + ADD
Sbjct: 348 NVSESTKKVILTEFNRGMNITDEIMLGRVPWERLFEAPSFFYRYRHFIVLLVNSQTADDH 407
Query: 122 LTWKGWVESRFRQLTLKIEQDTN-GLLQCHP 151
L W G VES+ R L +E++ + L +P
Sbjct: 408 LEWCGLVESKVRLLIGNLERNAHIALAHVNP 438
>gi|345563932|gb|EGX46915.1| hypothetical protein AOL_s00097g341 [Arthrobotrys oligospora ATCC
24927]
Length = 1294
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 88/153 (57%), Gaps = 1/153 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++VS+FFR+ QW WP PV++ PIE G L VW+PR P D++H MPIITPAY M S+
Sbjct: 943 VIVSKFFRILGQWAWPQPVLLKPIEDGPLNVRVWNPRLYPSDKNHLMPIITPAYPSMCST 1002
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ ++ T + + I + I GK W LFE + FF + Y+ YL V+ A + +
Sbjct: 1003 HNITPSTKAAILGEMAKAADIVDRIITGKGNWKQLFERHTFFTKDYKYYLAVNASAKEQE 1062
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
+ W G VES+ R L +K+E + + PY
Sbjct: 1063 ASVKWSGLVESKIRHLVMKLEMCNDVIASARPY 1095
>gi|449682525|ref|XP_002165152.2| PREDICTED: poly(A) polymerase gamma-like, partial [Hydra
magnipapillata]
Length = 351
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 124/232 (53%), Gaps = 11/232 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMM--CPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
LV +FF +Y++W WP PV++ P E +L F +WDPR NP DR H MPIITPAY NS
Sbjct: 103 LVQKFFLIYSKWAWPQPVLLKQMPTE-NKLNFPIWDPRMNPADRFHLMPIITPAYPQQNS 161
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
++ VS+ + VM + F+ G ++ EEI + W ALF FF+ Y++Y+ + + ++
Sbjct: 162 TFNVSMSSRTVMQDAFKRGFQVMEEIYSKTSTWKALFAPANFFQKYKHYIVLSAYSNSSE 221
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY--IDPSKPCPNSAFFWGLSRKEV 177
L W+G VES+ R L + +E++ L H P Y I S+ S +F GL ++
Sbjct: 222 HHLEWEGLVESKIRILIVNLERNQFVKL-AHVNPKSYDPILKSESGTVSRWFIGLEFQKP 280
Query: 178 GTSKECQQFDFQGTVKNFRRGID----NYRVRREGRDIYFSYVCRRHLPSFV 225
+K + D ++ F + + REG +V ++ L +++
Sbjct: 281 EGTKNV-KVDITAEIQYFTSTVHKQACQIAIFREGMRTEARHVKKKQLSNYL 331
>gi|17985991|ref|NP_536790.1| hiiragi, isoform A [Drosophila melanogaster]
gi|24655907|ref|NP_725919.1| hiiragi, isoform B [Drosophila melanogaster]
gi|116007728|ref|NP_001036562.1| hiiragi, isoform C [Drosophila melanogaster]
gi|7110522|gb|AAF36978.1|AF231704_1 poly A polymerase [Drosophila melanogaster]
gi|9453846|dbj|BAB03279.1| poly A polymerase [Drosophila melanogaster]
gi|21626946|gb|AAF57528.2| hiiragi, isoform A [Drosophila melanogaster]
gi|21626947|gb|AAM68424.1| hiiragi, isoform B [Drosophila melanogaster]
gi|25012374|gb|AAN71296.1| RE09914p [Drosophila melanogaster]
gi|113194668|gb|ABI31107.1| hiiragi, isoform C [Drosophila melanogaster]
gi|211938509|gb|ACJ13151.1| FI03258p [Drosophila melanogaster]
gi|220942518|gb|ACL83802.1| hrg-PA [synthetic construct]
gi|220952732|gb|ACL88909.1| hrg-PA [synthetic construct]
Length = 659
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 87/141 (61%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 276 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPIITPAYPQQNSTF 335
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +V+ +F G I +EI LG+ W LFE FF Y +++ + + + ADD
Sbjct: 336 NVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDH 395
Query: 122 LTWKGWVESRFRQLTLKIEQD 142
L W G VES+ R L +E++
Sbjct: 396 LEWCGLVESKVRLLIGNLERN 416
>gi|146180895|ref|XP_001021673.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|146144391|gb|EAS01427.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 1765
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 102/161 (63%), Gaps = 9/161 (5%)
Query: 2 LVSRFFRVYTQWRWPN-PVMMCPIE----MGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ RFF +Y+ W+W + PV + I+ +L W P +DR+ M IITP + C
Sbjct: 1362 LIERFFFLYSHWKWHDLPVYVEHIQEDVANTKLNADQWRPE--FRDRNSMM-IITPCFPC 1418
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 116
MN+++ VS TL+++ EQ Q GNRI +I+ + +S LF+ + FF+ Y+++LQ++IVA
Sbjct: 1419 MNTAHNVSPTTLRIIQEQLQYGNRIINKIKKNEKTFSDLFKPFNFFKRYKHFLQINIVAT 1478
Query: 117 DADDLLTWKGWVESRFRQLTLKIEQDT-NGLLQCHPYPNKY 156
+ +D + WKG VESR R+LT EQ N L+Q HPYPN +
Sbjct: 1479 NKNDHIVWKGHVESRLRKLTKLFEQSIHNKLIQVHPYPNPF 1519
>gi|365991615|ref|XP_003672636.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
gi|343771412|emb|CCD27393.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 115/211 (54%), Gaps = 10/211 (4%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF+++++W+WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VVLNRFFKIFSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD- 119
+ ++ T ++ ++F G ++ +I K W LF+ + FF Y+ YL + D
Sbjct: 314 HNITESTKTIILKEFARGVQVTNDIFSNKGNWGDLFKKHTFFYEYKFYLTITASTRGTDE 373
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGT 179
+ L W G VES+ R L LK+E G+ HPY +KP S + + +
Sbjct: 374 EHLKWSGLVESKLRLLILKLEA-LPGINLAHPY-------TKPF-ESTYCYTTDEESKTI 424
Query: 180 SKECQQFDFQGTVKNFRRGIDNYRVRREGRD 210
+ +GT+ NF + D+ + + +D
Sbjct: 425 LNDYGSHATEGTLNNFLKVTDDNKNNDDVKD 455
>gi|348506632|ref|XP_003440862.1| PREDICTED: poly(A) polymerase alpha-like [Oreochromis niloticus]
Length = 601
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 138/283 (48%), Gaps = 26/283 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF++++ W WP P+ + +E WDP+ N DR H MPIITPAY N+S
Sbjct: 253 LVIKFFKIFSMWVWPIPIRLIEVEKCNYNLPFWDPKVNQSDRCHLMPIITPAYPQQNTSV 312
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS TL ++ E+ G+ IC+EIE KA+WS LFE FF+ Y++Y ++ +
Sbjct: 313 NVSRSTLAILNEEIHRGHAICQEIEQKKAKWSELFEQTDFFQKYQHYAVLEASYTTEEKC 372
Query: 122 LTWKGWVESRFRQLTLKIEQD-TNGLLQCHP--YPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ L HP +P K ++ + GL V
Sbjct: 373 LEWVGLVESKIRLLVSTLERNELVSLAHVHPHAFPGHRKANKKDGQSTMWLIGL----VL 428
Query: 179 TSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRH 238
K+ ++F+ + R D Y EG + S C R ++ + +PS
Sbjct: 429 NVKDSERFN------SLARSSDIY---DEGMSL--SVACLRR-EDLIYEPQQRAPQPS-- 474
Query: 239 FNEQSGKPC--EDVKMCQSCSSERQLKRKKEHEIKEVRPDKSV 279
++ PC V + + +R+L + E K+++ DKS+
Sbjct: 475 ---ETLPPCHVSPVSADKQGTKKRELLHRSETPSKKIKDDKSL 514
>gi|84999896|ref|XP_954669.1| polyA polymerase [Theileria annulata]
gi|65305664|emb|CAI73989.1| polyA polymerase, putative [Theileria annulata]
Length = 512
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 132/253 (52%), Gaps = 12/253 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM-----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ +FFRV++ W+W PV +C I+ G + F VWDPR NP+DR H MPIITPA+
Sbjct: 262 LIEKFFRVFSVWQWECPVTLCKIKEPPNIPGLMSFKVWDPRVNPQDRHHLMPIITPAFPS 321
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAE-WSALFEHYPFFEAYENYLQVDIVA 115
MNS++ V+ T +V+TE+ I + L E W + E F Y+++L +++
Sbjct: 322 MNSTHNVTATTKKVITEELMRALEIFKTPNLSNLELWEKVLEEQDVFSNYKHFLVIEVYG 381
Query: 116 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRK 175
+ W+GW+ SR R L ++E N ++ P K+ D + +SAFF +
Sbjct: 382 STEHAHGKWEGWIGSRMRFLISRLENLGNTHIRPIPGFFKFEDDNWDYASSAFF--AFKV 439
Query: 176 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRD-IYFS--YVCRRHLPSFVFPDGYKW 232
G ++ + D + V++F+ I+N+ + RD I F+ ++ LP +V + K
Sbjct: 440 ISGVAENSKTLDIRSAVQSFKDIINNWSDMEKYRDQISFNIKHLKNNQLPDYVLSNKSK- 498
Query: 233 HRPSRHFNEQSGK 245
R +E+S +
Sbjct: 499 KRSINEISEESNR 511
>gi|9453844|dbj|BAB03278.1| poly A polymerase [Drosophila melanogaster]
Length = 459
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 87/141 (61%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W+WPNPV++ + L F VWDPR N DR H MPIITPAY NS++
Sbjct: 76 LVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHPMPIITPAYPQQNSTF 135
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T +V+ +F G I +EI LG+ W LFE FF Y +++ + + + ADD
Sbjct: 136 NVSESTKKVILTEFNRGMNITDEIMLGRIPWERLFEAPSFFYRYRHFIVLLVNSQTADDH 195
Query: 122 LTWKGWVESRFRQLTLKIEQD 142
L W G VES+ R L +E++
Sbjct: 196 LEWCGLVESKVRLLIGNLERN 216
>gi|156843263|ref|XP_001644700.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
gi|156115348|gb|EDO16842.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
Length = 572
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 93/153 (60%), Gaps = 2/153 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF++ ++W+WP PV++ PIE G L VW+P+ +DR HRMP+ITPAY M ++
Sbjct: 254 VILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRCHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ ++ T +V+ ++F+ G I I KA W LF+ + FF Y+ YL V D+
Sbjct: 314 HNITESTKKVILKEFERGVEITNNIFSNKATWEDLFKRHTFFHDYKFYLTVTASTKGNDE 373
Query: 121 L-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
L W G VES+ R L LK+E G+ HPY
Sbjct: 374 QHLKWSGLVESKVRLLILKLEA-LPGIKSAHPY 405
>gi|255713432|ref|XP_002552998.1| KLTH0D06380p [Lachancea thermotolerans]
gi|238934378|emb|CAR22560.1| KLTH0D06380p [Lachancea thermotolerans CBS 6340]
Length = 594
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 92/153 (60%), Gaps = 2/153 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF + T+W WP PV++ PIE G L VW+PR +DRSH+MP+ITPAY M ++
Sbjct: 254 VILTRFFHILTKWNWPQPVLLKPIEDGPLQVRVWNPRIYAQDRSHKMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDI-VAADAD 119
+ +S T +V+ + + G +I EI K WS LF+ + FF Y+ YL V + ++
Sbjct: 314 HNISESTKKVILAELERGAQISSEIFSNKKTWSDLFQKHDFFYKYKFYLTVMASTSGSSE 373
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
L W G VES+ R L K+E G+ HP+
Sbjct: 374 QHLKWSGLVESKLRLLVQKLET-LGGINLAHPF 405
>gi|324975506|gb|ADY62687.1| PAPa [Candida orthopsilosis]
Length = 552
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 94/157 (59%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++ +FF++Y+QW WP PV++ IE G L VW+PR DR HRMP+ITPAY M ++
Sbjct: 253 VILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYL-QVDIVAADAD 119
+ ++ T +++ +F G I EI G+ WS L E + FF Y+ YL V ++A+
Sbjct: 313 HNITNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSFFHQYKFYLCVVAATKSNAE 372
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
+ L + G VES+ R L K+EQ +G+ HPY +
Sbjct: 373 EHLKYSGMVESKLRLLVQKLEQ-VDGVELAHPYVKSF 408
>gi|448531596|ref|XP_003870285.1| Pap1 poly(A) polymerase [Candida orthopsilosis Co 90-125]
gi|380354639|emb|CCG24155.1| Pap1 poly(A) polymerase [Candida orthopsilosis]
Length = 557
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 94/157 (59%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++ +FF++Y+QW WP PV++ IE G L VW+PR DR HRMP+ITPAY M ++
Sbjct: 258 VILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITPAYPSMCAT 317
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYL-QVDIVAADAD 119
+ ++ T +++ +F G I EI G+ WS L E + FF Y+ YL V ++A+
Sbjct: 318 HNITNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSFFHQYKFYLCVVAATKSNAE 377
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
+ L + G VES+ R L K+EQ +G+ HPY +
Sbjct: 378 EHLKYSGMVESKLRLLVQKLEQ-VDGVELAHPYVKSF 413
>gi|10835833|pdb|1F5A|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 513
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 113/226 (50%), Gaps = 6/226 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H PIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLXPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T V E+F+ G I +EI L KAEWS LFE FF+ Y++Y+ + A
Sbjct: 328 NVSVSTRXVXVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P +P K + + GL K+
Sbjct: 388 LEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTXWVIGLVFKKTE 447
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
S+ +D Q R N + I +V R+ L
Sbjct: 448 NSENLSVDLTYDIQSFTDTVYRQAINSKXFEVDXKIAAXHVKRKQL 493
>gi|296415646|ref|XP_002837497.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633369|emb|CAZ81688.1| unnamed protein product [Tuber melanosporum]
Length = 587
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 89/164 (54%), Gaps = 3/164 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++S+FF++ W WP PV++ IE G L VW+P+ P DR H MPIITPAY M ++
Sbjct: 258 VVISKFFKILAHWTWPQPVLLKGIEDGPLSVRVWNPKIYPSDRGHLMPIITPAYPSMCAT 317
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ ++ T ++ + + I + I +G W LFE + FF Y YL V A D D
Sbjct: 318 HNITKSTKSIIIREMKHAAEIMDGIMVGNLSWDKLFERHSFFTNGYRYYLSVVAAAKDKD 377
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPC 163
LL W G VES+ R L +K+E + HP+ NK D C
Sbjct: 378 TLLGWSGLVESKLRHLVMKLEI-LETIKLAHPF-NKGFDNVHFC 419
>gi|50292873|ref|XP_448869.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528182|emb|CAG61839.1| unnamed protein product [Candida glabrata]
Length = 569
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 94/153 (61%), Gaps = 2/153 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF++ ++W+WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFKILSEWKWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVA-ADAD 119
+ ++ T V+ ++ G ++ +I K W+ LF + FF Y+ YL + D +
Sbjct: 314 HNITESTKAVILKELNRGIQVTNDIFAYKKTWADLFTKHDFFFQYKYYLTITAATRGDDE 373
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
+ L W G VES+ R LTLK+E G+ HP+
Sbjct: 374 EHLKWSGLVESKLRLLTLKLET-IPGIKLAHPF 405
>gi|402226328|gb|EJU06388.1| polymerase [Dacryopinax sp. DJM-731 SS1]
Length = 620
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 2/164 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++SRFF + QW WP P+++ IE G L VW+P+ P DR+H MPIITPAY M +++
Sbjct: 257 ILSRFFHIIGQWAWPQPILLKAIEDGPLNVRVWNPQIYPSDRTHLMPIITPAYPSMCATH 316
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V+ T+++M + + G++I E+I W+ LFE + FF Y YLQ+ I + + +
Sbjct: 317 NVTHSTMKIMQNELRRGSQIVEKIIQAGEPWANLFEKHDFFHMYRYYLQIIITSGNQEMY 376
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 165
W G VES+ R L K+E + HP+ K +D C N
Sbjct: 377 HKWAGTVESKIRLLVGKLELQ-EAVEIAHPF-TKGLDQVVCCLN 418
>gi|308478522|ref|XP_003101472.1| CRE-PAP-1 protein [Caenorhabditis remanei]
gi|308263118|gb|EFP07071.1| CRE-PAP-1 protein [Caenorhabditis remanei]
Length = 639
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 101/172 (58%), Gaps = 10/172 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI-----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV R F ++ W WP+PV++ + ++G L VWDPR+ DR H MPIITPA+
Sbjct: 257 LVHRMFFIFATWTWPHPVLLNELNSERTDVGALIDLVWDPRRKSTDRFHLMPIITPAFPQ 316
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 116
NS++ V+ T+QV+ + G IC +I GK W ALF+ FF Y++Y+ + + A
Sbjct: 317 QNSTHNVTRSTMQVIRTEICEGLEICRDISEGKCGWDALFKEVNFFSRYKHYIALLMAAP 376
Query: 117 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF 168
+ ++ L + G++ESR R L +E++ + ++ H PNK+ KP PN+ F
Sbjct: 377 NEEEELNYGGFLESRIRLLVQSLERNQD-IVIAHNDPNKH----KPSPNAKF 423
>gi|320038983|gb|EFW20918.1| Poly(A) polymerase [Coccidioides posadasii str. Silveira]
Length = 590
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 2/177 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ VSL T V+ + + G I E+I LG+ WS LF + FF + Y+ YL + + +
Sbjct: 319 HNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSKDYKYYLNITASSTSKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 176
W G VE++ R L + +++ + + HP+P ++ + S GL + E
Sbjct: 379 AQSVWSGLVEAKLRHLVIALDKKAS-IEVAHPFPKAHVAALESANGSINMPGLGQTE 434
>gi|207343429|gb|EDZ70889.1| YKR002Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271932|gb|EEU06953.1| Pap1p [Saccharomyces cerevisiae JAY291]
Length = 568
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 100/165 (60%), Gaps = 3/165 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF + ++W WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ ++ T +V+ ++F G +I +I K W+ LFE FF Y+ YL++ +D+
Sbjct: 314 HNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDE 373
Query: 121 L-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCP 164
L W G VES+ R L +K+E T G+ HP+ K + S CP
Sbjct: 374 QHLKWSGLVESKVRLLVMKLEVLT-GIKIAHPF-TKPFESSYCCP 416
>gi|71031845|ref|XP_765564.1| poly(A) polymerase [Theileria parva strain Muguga]
gi|68352521|gb|EAN33281.1| poly(A) polymerase, putative [Theileria parva]
Length = 507
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 127/240 (52%), Gaps = 12/240 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM-----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ +FFRVY+ W+W PV +C I+ G + F VWDPR NP+DR H MPIITPA+
Sbjct: 262 LIEKFFRVYSVWQWECPVTLCKIKEPPNIPGLMSFKVWDPRVNPQDRHHLMPIITPAFPS 321
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAE-WSALFEHYPFFEAYENYLQVDIVA 115
MNS++ V+ T +V+TE+ I + L E W + E F Y+++L +++
Sbjct: 322 MNSTHNVTATTKRVITEELMRALEIFKTSNLTNVELWEKVLEEEDVFSNYKHFLVIEVYG 381
Query: 116 ADADDLLT-WKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSR 174
++ W+GW+ SR R L ++E N ++ P K+ D + +SAFF +
Sbjct: 382 SNEHVAHNKWEGWIGSRMRFLISRLENLGNTYIRPIPGFFKFEDDNWDYASSAFF--AFK 439
Query: 175 KEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRD-IYFS--YVCRRHLPSFVFPDGYK 231
G + + D + +V++F+ I+N+ + RD I F+ ++ LP +V + K
Sbjct: 440 VISGVVETSKTLDIRSSVQSFKDIINNWSDMEKYRDQISFNIKHLKNNQLPDYVLSNKSK 499
>gi|401840600|gb|EJT43353.1| PAP1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 569
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 100/165 (60%), Gaps = 3/165 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF + ++W WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ ++ T +V+ ++F+ G +I +I K W+ LFE FF Y+ YL++ +D+
Sbjct: 314 HNITESTKKVILKEFERGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDE 373
Query: 121 L-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCP 164
L W G VES+ R L +K+E G+ HP+ K + S CP
Sbjct: 374 QHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPF-TKPFESSYCCP 416
>gi|353242336|emb|CCA73989.1| probable PAP1-poly(A) polymerase [Piriformospora indica DSM 11827]
Length = 624
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 90/151 (59%), Gaps = 1/151 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V RFF + + W+WP PV++ IE G L VW+P+ P DR+H+MPIITPAY M S++
Sbjct: 256 IVRRFFLIMSMWKWPQPVVLKKIEEGNLNMRVWNPKIYPSDRAHKMPIITPAYPSMCSTH 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V T +++ E+ + G + I G+A+W+ LF + FF Y+ YLQ+ D +
Sbjct: 316 NVMNCTFEIIQEELKRGQELIVRITNGEAKWADLFTKHTFFSQYQYYLQIIASCDDEEIQ 375
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
W VES+ RQL K+E+ + L + HP+
Sbjct: 376 KKWSKTVESKGRQLVGKLEE-SGTLARVHPF 405
>gi|45185228|ref|NP_982945.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|44980886|gb|AAS50769.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|374106148|gb|AEY95058.1| FABL002Cp [Ashbya gossypii FDAG1]
Length = 598
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 89/153 (58%), Gaps = 2/153 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V+RFF + T+W WP PV++ PIE G L VW+P+ DR H+MP+ITPAY M S+
Sbjct: 254 VIVARFFHILTRWSWPQPVLLKPIEDGPLQVRVWNPKIYANDRLHKMPVITPAYPSMCST 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ + T +V+ + Q G + +I K W LF+ + FF Y+ YL V +D+
Sbjct: 314 HNICESTKKVILNELQRGVEVTTDIFTNKKTWGDLFQKHDFFYKYKFYLTVMASTKGSDE 373
Query: 121 L-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
L W G VES+ R L LK+E +G+ HPY
Sbjct: 374 QHLKWSGLVESKLRLLVLKLEV-LSGINLAHPY 405
>gi|401624879|gb|EJS42918.1| pap1p [Saccharomyces arboricola H-6]
Length = 569
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 100/165 (60%), Gaps = 3/165 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF + ++W WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ ++ T +V+ ++F+ G +I +I K W+ LFE FF Y+ YL++ +D+
Sbjct: 314 HNITESTKKVILKEFERGVQITNDIFSNKKSWANLFEKNDFFYRYKFYLEITAYTRGSDE 373
Query: 121 L-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCP 164
L W G VES+ R L +K+E G+ HP+ K + S CP
Sbjct: 374 QHLKWGGLVESKVRLLIMKLEV-LAGIKIAHPF-TKPFESSYCCP 416
>gi|302696569|ref|XP_003037963.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
gi|300111660|gb|EFJ03061.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
Length = 649
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V RFF + QW WP PV++ ++ ++G W+P+ P DR+HRMP+ITP Y M +++
Sbjct: 258 VVGRFFPIMHQWPWPAPVILKHVDDLQMGQRSWNPKLFPGDRAHRMPVITPVYPAMCATH 317
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS+ T ++ E+ + G ++ I LG ++WS LFE + FF Y +LQ+ A A+
Sbjct: 318 NVSVSTFAIIEEELRRGTKLMNSIILGSSKWSELFEKHDFFHKYRYFLQIIASTASAEAQ 377
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
L W VE++ RQL K+E L HP+
Sbjct: 378 LMWAPNVEAKIRQLVSKLEL-VESLTLAHPF 407
>gi|254578066|ref|XP_002495019.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
gi|238937909|emb|CAR26086.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
Length = 567
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 93/153 (60%), Gaps = 2/153 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF++ ++W+WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ ++ T +V+ ++ + G I +I K WS LF + FF Y+ YL V D+
Sbjct: 314 HNITESTKRVILQELENGISITNDIFSNKKTWSDLFTKHNFFYKYKFYLTVMASTRGTDE 373
Query: 121 L-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
L W G VES+ R L LK+E G+ HP+
Sbjct: 374 ENLKWSGMVESKVRLLVLKLEA-LPGIKLAHPF 405
>gi|258563094|ref|XP_002582292.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
gi|237907799|gb|EEP82200.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
Length = 616
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 92/157 (58%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++ +FFR+ QW WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 276 VIIGKFFRIMNQWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 335
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ +SL T V+ + + G I ++I +G+ WS LF + FF + Y+ YL + + +
Sbjct: 336 HNISLSTKAVILRELKRGGDIVDKIFMGQLRWSDLFAKHSFFSKDYKYYLSITASSTTKE 395
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L L +++ ++ + HP+P +
Sbjct: 396 AQSVWSGLVESKLRHLVLALDRKSS-IEVAHPFPKGF 431
>gi|323308211|gb|EGA61460.1| Pap1p [Saccharomyces cerevisiae FostersO]
Length = 568
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 99/165 (60%), Gaps = 3/165 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF + ++W WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ ++ T +V+ ++F G +I +I K W+ LFE FF Y+ YL++ +D+
Sbjct: 314 HNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDE 373
Query: 121 L-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCP 164
L W G VES+ R L +K+E G+ HP+ K + S CP
Sbjct: 374 QHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPF-TKPFESSYCCP 416
>gi|403213836|emb|CCK68338.1| hypothetical protein KNAG_0A06840 [Kazachstania naganishii CBS
8797]
Length = 576
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 95/163 (58%), Gaps = 12/163 (7%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF++Y+ W+WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VIINRFFKIYSDWKWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAAD--A 118
+ ++ T ++ ++ Q G +I +I K W+ LF+ + FF Y+ YL + +
Sbjct: 314 HNITESTKSIILQELQRGIQITNDIFTNKKTWNDLFKRHDFFYKYKFYLTITASTREHTG 373
Query: 119 DD---------LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
DD L W G VES+ R L +K+E G+ HPY
Sbjct: 374 DDGEKTGGDEQHLKWSGLVESKARLLVMKLEA-LEGIKVAHPY 415
>gi|398364849|ref|NP_012927.3| Pap1p [Saccharomyces cerevisiae S288c]
gi|266739|sp|P29468.1|PAP_YEAST RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|3527|emb|CAA46250.1| polyA polymerase 1 [Saccharomyces cerevisiae]
gi|4099|emb|CAA42852.1| poly(A)polymerase [Saccharomyces cerevisiae]
gi|486407|emb|CAA82072.1| PAP1 [Saccharomyces cerevisiae]
gi|151941547|gb|EDN59910.1| poly(A) polymerase [Saccharomyces cerevisiae YJM789]
gi|190409824|gb|EDV13089.1| poly(A) polymerase [Saccharomyces cerevisiae RM11-1a]
gi|259147834|emb|CAY81084.1| Pap1p [Saccharomyces cerevisiae EC1118]
gi|285813261|tpg|DAA09158.1| TPA: Pap1p [Saccharomyces cerevisiae S288c]
gi|323304127|gb|EGA57905.1| Pap1p [Saccharomyces cerevisiae FostersB]
gi|349579565|dbj|GAA24727.1| K7_Pap1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298143|gb|EIW09241.1| Pap1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|228305|prf||1802393A poly(A) polymerase
Length = 568
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 99/165 (60%), Gaps = 3/165 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF + ++W WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ ++ T +V+ ++F G +I +I K W+ LFE FF Y+ YL++ +D+
Sbjct: 314 HNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDE 373
Query: 121 L-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCP 164
L W G VES+ R L +K+E G+ HP+ K + S CP
Sbjct: 374 QHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPF-TKPFESSYCCP 416
>gi|158429647|pdb|2Q66|A Chain A, Structure Of Yeast Poly(A) Polymerase With Atp And
Oligo(A)
Length = 525
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 99/166 (59%), Gaps = 3/166 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF + ++W WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 250 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 309
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ ++ T +V+ ++F G +I +I K W+ LFE FF Y+ YL++ +D+
Sbjct: 310 HNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDE 369
Query: 121 L-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 165
L W G VES+ R L +K+E G+ HP+ K + S CP
Sbjct: 370 QHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPF-TKPFESSYCCPT 413
>gi|126030614|pdb|2HHP|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Closed
Conformation
Length = 530
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 99/166 (59%), Gaps = 3/166 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF + ++W WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ ++ T +V+ ++F G +I +I K W+ LFE FF Y+ YL++ +D+
Sbjct: 314 HNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDE 373
Query: 121 L-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 165
L W G VES+ R L +K+E G+ HP+ K + S CP
Sbjct: 374 QHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPF-TKPFESSYCCPT 417
>gi|452986896|gb|EME86652.1| hypothetical protein MYCFIDRAFT_49534 [Pseudocercospora fijiensis
CIRAD86]
Length = 612
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 99/185 (53%), Gaps = 7/185 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF + W WP+P+ + E G LG + WDP NP D+ H MP+ITPAY CMNS++
Sbjct: 260 IVQKFFWLLHTWAWPSPIYLQAREKGPLGKTEWDPTTNPGDKRHLMPVITPAYPCMNSTH 319
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADADD 120
++ T+ V+ ++ G +I EI GK W LF + FF +AY++Y+ + A D
Sbjct: 320 TITPSTMAVLKKESDRGEKIMNEIYEGKRPWKDLFAKHTFFSDAYQHYICIITAARTKDA 379
Query: 121 LLTWKGWVESRFRQLTLKIEQ-DTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGT 179
W G V+SR ++L IEQ D + + P+ NK I C + A K +
Sbjct: 380 QQAWSGLVQSRVKRLLAGIEQSDADSVKLVQPF-NKGIARRHECKSEADI----EKTLAG 434
Query: 180 SKECQ 184
ECQ
Sbjct: 435 GLECQ 439
>gi|10120664|pdb|1FA0|A Chain A, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|10120665|pdb|1FA0|B Chain B, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|188595983|pdb|3C66|A Chain A, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
gi|188595984|pdb|3C66|B Chain B, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
Length = 537
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 99/166 (59%), Gaps = 3/166 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF + ++W WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ ++ T +V+ ++F G +I +I K W+ LFE FF Y+ YL++ +D+
Sbjct: 314 HNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDE 373
Query: 121 L-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 165
L W G VES+ R L +K+E G+ HP+ K + S CP
Sbjct: 374 QHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPF-TKPFESSYCCPT 417
>gi|50304345|ref|XP_452122.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641254|emb|CAH02515.1| KLLA0B13255p [Kluyveromyces lactis]
Length = 598
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 96/157 (61%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++S+FF++ ++W+WP PV++ PIE G L VW+P+ +DRSH+MP+ITPAY M ++
Sbjct: 254 VIISKFFQILSRWKWPQPVLLKPIEDGPLQVRVWNPKIYAQDRSHKMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ +S T +V+ + Q G + ++I + W LF+ + FF Y+ YL V + +D+
Sbjct: 314 HNISESTKKVILSELQRGVEVTQKIFSNELSWEDLFKKHDFFFKYKFYLTVMVSTKGSDE 373
Query: 121 L-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
L W G+VES+ R L K+E G+ HP+ Y
Sbjct: 374 QHLKWSGFVESKLRLLVQKLEV-LPGINLAHPFIEPY 409
>gi|126031338|pdb|2O1P|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
gi|126031339|pdb|2O1P|B Chain B, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
Length = 546
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 99/166 (59%), Gaps = 3/166 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF + ++W WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ ++ T +V+ ++F G +I +I K W+ LFE FF Y+ YL++ +D+
Sbjct: 314 HNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDE 373
Query: 121 L-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 165
L W G VES+ R L +K+E G+ HP+ K + S CP
Sbjct: 374 QHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPF-TKPFESSYCCPT 417
>gi|303317852|ref|XP_003068928.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108609|gb|EER26783.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 599
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ VSL T V+ + + G I E+I LG+ WS LF + FF + Y+ YL + + +
Sbjct: 319 HNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSKDYKYYLNITASSTSKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VE++ R L + +++ + + HP+P +
Sbjct: 379 AQSVWSGLVEAKLRHLVIALDKKAS-IEVAHPFPKGF 414
>gi|119186325|ref|XP_001243769.1| hypothetical protein CIMG_03210 [Coccidioides immitis RS]
Length = 587
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 247 VIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 306
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ VSL T V+ + + G I E+I LG+ WS LF + FF + Y+ YL + + +
Sbjct: 307 HNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSKDYKYYLNITASSTSKE 366
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VE++ R L + +++ + + HP+P +
Sbjct: 367 AQSVWSGLVEAKLRHLVIALDKKAS-IDVAHPFPKGF 402
>gi|448081751|ref|XP_004194965.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359376387|emb|CCE86969.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 90/155 (58%), Gaps = 6/155 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +Y QW WP PV++ IE G L VW+PR P DR HRMP+ITPAY M ++
Sbjct: 253 VIVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADA-- 118
+ ++ T +++ ++F+ G I +I W+ L + FF Y+ YL IVAA
Sbjct: 313 HNITSSTQKIIMKEFRRGIDIMNQINGNNKTWANLLARHTFFHNYKFYLC--IVAATKGP 370
Query: 119 -DDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
++ + W G VESR R L K+E T G+ HPY
Sbjct: 371 YEEHIKWSGMVESRLRILVQKLEL-TEGIELAHPY 404
>gi|392870480|gb|EAS32287.2| Poly(A) polymerase PAPalpha [Coccidioides immitis RS]
Length = 599
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ VSL T V+ + + G I E+I LG+ WS LF + FF + Y+ YL + + +
Sbjct: 319 HNVSLSTKAVILRELKRGGDIVEKIFLGQLRWSDLFAKHTFFSKDYKYYLNITASSTSKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VE++ R L + +++ + + HP+P +
Sbjct: 379 AQSVWSGLVEAKLRHLVIALDKKAS-IDVAHPFPKGF 414
>gi|4062995|dbj|BAA36217.1| poly(A) polymerase isozyme [Candida albicans]
Length = 555
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 92/159 (57%), Gaps = 6/159 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +Y+QW WP PV++ IE G L VW+PR DR HRMP+ITPAY M ++
Sbjct: 253 VIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD- 119
+ ++ T +V+ +FQ G + +I +GK WS L E + FF Y+ YL IVAA
Sbjct: 313 HNITSSTQKVILSEFQRGIELMNDINVGKKSWSDLLERHDFFFRYKFYLC--IVAATRST 370
Query: 120 --DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
+ L + G VES+ R L K+E G+ HPY +
Sbjct: 371 YAEHLKYSGMVESKLRLLVQKLEL-VEGIELAHPYVKSF 408
>gi|68482965|ref|XP_714613.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
gi|62900711|sp|Q9UW26.1|PAPA_CANAL RecName: Full=Poly(A) polymerase PAPa; AltName: Full=Polynucleotide
adenylyltransferase a
gi|5771506|gb|AAD51407.1| PAPa [Candida albicans]
gi|46436196|gb|EAK95563.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
Length = 555
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 92/159 (57%), Gaps = 6/159 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +Y+QW WP PV++ IE G L VW+PR DR HRMP+ITPAY M ++
Sbjct: 253 VIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD- 119
+ ++ T +V+ +FQ G + +I +GK WS L E + FF Y+ YL IVAA
Sbjct: 313 HNITSSTQKVILSEFQRGIELMNDINVGKKSWSDLLERHDFFFRYKFYLC--IVAATRST 370
Query: 120 --DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
+ L + G VES+ R L K+E G+ HPY +
Sbjct: 371 YAEHLKYSGMVESKLRLLVQKLEL-VEGIELAHPYVKSF 408
>gi|448086239|ref|XP_004196053.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359377475|emb|CCE85858.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 91/159 (57%), Gaps = 6/159 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FF +Y QW WP PV++ IE G L VW+PR P DR HRMP+ITPAY M ++
Sbjct: 253 VVVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADA-- 118
+ ++ T +++ ++F+ G I +I W+ L + FF Y+ YL IVAA
Sbjct: 313 HNITSSTQKIIMKEFRRGIDIMNQISGNNKTWANLLARHTFFHNYKFYLC--IVAATKGS 370
Query: 119 -DDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
++ + W G VESR R L K+E T G+ HPY +
Sbjct: 371 YEEHIKWSGMVESRLRILVQKLEL-TEGIELAHPYVKTF 408
>gi|255723652|ref|XP_002546758.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
gi|240130534|gb|EER30100.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
Length = 557
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 94/161 (58%), Gaps = 6/161 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++ +FF +Y+QW WP PV++ IE G L VW+P+ DR HRMP+ITPAY M ++
Sbjct: 253 VIIEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPKLYAPDRQHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA---D 117
+ ++ T +V+ +FQ G I I G WS LFE + FF Y+ YL IVAA +
Sbjct: 313 HNITSSTQKVILSEFQRGIEIMNGINSGSKTWSDLFERHDFFFRYKFYLC--IVAATKSN 370
Query: 118 ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID 158
+++ L + G VES+ R L K+E G+ HPY + D
Sbjct: 371 SEEHLKYGGMVESKLRLLVQKLEL-VEGIELAHPYVKTFED 410
>gi|254567353|ref|XP_002490787.1| Poly(A) polymerase [Komagataella pastoris GS115]
gi|238030583|emb|CAY68507.1| Poly(A) polymerase [Komagataella pastoris GS115]
Length = 551
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 95/155 (61%), Gaps = 6/155 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++S+FF + QW WP PV++ PIE G L VW+PR P D+ H+MP+ITPAY M ++
Sbjct: 252 VIISKFFVILGQWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDKYHKMPVITPAYPSMCAT 311
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA---D 117
+ ++ T +V+ ++FQ G+ I EI G +WS LF + FF Y+ YL V +AA
Sbjct: 312 HNITESTKKVILQEFQRGSGIVTEIFSGAKKWSDLFTKHDFFRRYKFYLTV--IAATKGS 369
Query: 118 ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
+++ + G VES+ R L K+E + N L HP+
Sbjct: 370 SEEQKKFAGMVESKLRLLVQKLENNENINL-AHPF 403
>gi|406868090|gb|EKD21127.1| Poly(A) polymerase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 579
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 93/156 (59%), Gaps = 2/156 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF++ +W+WP PV++ IE G L VW+P+ N DR H MPIITPAY M +++
Sbjct: 261 IVMKFFKIIDKWQWPQPVLLKNIETGTLNLQVWNPQINHTDRRHIMPIITPAYPSMCTTH 320
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADADD 120
V+ T+ V+ ++ + G I + + +GKA+W LFE + FF +Y+ YL + + ++
Sbjct: 321 NVTRSTMAVIHKELKRGGEIADRVMMGKAKWKDLFEKHTFFTSSYKYYLCIITASTSSEA 380
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G+VES+ R L K+ + T+ + P+ Y
Sbjct: 381 QTKWAGFVESKVRLLVGKLTEQTS-IAIAQPFNKGY 415
>gi|365764657|gb|EHN06179.1| Pap1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 488
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 99/166 (59%), Gaps = 3/166 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++++RFF + ++W WP PV++ PIE G L VW+P+ +DRSHRMP+ITPAY M ++
Sbjct: 254 VILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCAT 313
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ ++ T +V+ ++F G +I +I K W+ LFE FF Y+ YL++ +D+
Sbjct: 314 HNITECTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDE 373
Query: 121 L-LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 165
L W G VES+ R L +K+E G+ HP+ K + S CP
Sbjct: 374 QHLKWSGLVESKVRLLVMKLEV-LAGIKIAHPF-TKPFESSYCCPT 417
>gi|328351170|emb|CCA37570.1| poly(A) polymerase [Komagataella pastoris CBS 7435]
Length = 908
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 96/159 (60%), Gaps = 6/159 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++S+FF + QW WP PV++ PIE G L VW+PR P D+ H+MP+ITPAY M ++
Sbjct: 609 VIISKFFVILGQWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDKYHKMPVITPAYPSMCAT 668
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA---D 117
+ ++ T +V+ ++FQ G+ I EI G +WS LF + FF Y+ YL V +AA
Sbjct: 669 HNITESTKKVILQEFQRGSGIVTEIFSGAKKWSDLFTKHDFFRRYKFYLTV--IAATKGS 726
Query: 118 ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
+++ + G VES+ R L K+E + N L HP+ +
Sbjct: 727 SEEQKKFAGMVESKLRLLVQKLENNENINL-AHPFVKTF 764
>gi|325090895|gb|EGC44205.1| poly(A) polymerase Pap [Ajellomyces capsulatus H88]
Length = 594
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 91/156 (58%), Gaps = 2/156 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FFR+ QW+WP PV++ PIE G L VW+P+ D+ H MPIITPAY M +++
Sbjct: 260 IVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATH 319
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADADD 120
VSL T V+ + + G I ++I +G+ W+ LF + FF + Y+ YL + + D
Sbjct: 320 NVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFFSQDYKYYLNITSASRSKDA 379
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ ++ + HP+P +
Sbjct: 380 QSVWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 414
>gi|154282671|ref|XP_001542131.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
gi|150410311|gb|EDN05699.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
Length = 594
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 91/156 (58%), Gaps = 2/156 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FFR+ QW+WP PV++ PIE G L VW+P+ D+ H MPIITPAY M +++
Sbjct: 260 IVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATH 319
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADADD 120
VSL T V+ + + G I ++I +G+ W+ LF + FF + Y+ YL + + D
Sbjct: 320 NVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFFSQDYKYYLNITSASRSKDA 379
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ ++ + HP+P +
Sbjct: 380 QSVWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 414
>gi|225677646|gb|EEH15930.1| Poly(A) polymerase PAPa [Paracoccidioides brasiliensis Pb03]
gi|226295198|gb|EEH50618.1| Poly(A) polymerase pla1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ QW WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNQWNWPQPVLLKPIEEGPLQMKVWNPKIYHGDRYHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ VSL T V+ + + G I ++I LG+ W+ LF + FF + Y+ YL + + +
Sbjct: 319 HNVSLSTKAVLLRELKRGGDIVDKIFLGQLTWNDLFTRHTFFSQDYKYYLSITSSSRGKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ ++ + HP+P +
Sbjct: 379 AQSVWSGLVESKLRHLVGALDRKSS-IEVAHPFPKGF 414
>gi|225561454|gb|EEH09734.1| poly(A) polymerase Pap [Ajellomyces capsulatus G186AR]
Length = 600
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 91/156 (58%), Gaps = 2/156 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FFR+ QW+WP PV++ PIE G L VW+P+ D+ H MPIITPAY M +++
Sbjct: 260 VVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATH 319
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADADD 120
VSL T V+ + + G I ++I +G+ W+ LF + FF + Y+ YL + + D
Sbjct: 320 NVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFFSQDYKYYLNITSASRSKDA 379
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ ++ + HP+P +
Sbjct: 380 QSVWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 414
>gi|240274559|gb|EER38075.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus H143]
Length = 493
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 91/156 (58%), Gaps = 2/156 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FFR+ QW+WP PV++ PIE G L VW+P+ D+ H MPIITPAY M +++
Sbjct: 153 IVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATH 212
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADADD 120
VSL T V+ + + G I ++I +G+ W+ LF + FF + Y+ YL + + D
Sbjct: 213 NVSLSTKTVLLRELKRGGDIADKIFVGQLSWNDLFTRHTFFSQDYKYYLNITSASRSKDA 272
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ ++ + HP+P +
Sbjct: 273 QSVWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 307
>gi|302904195|ref|XP_003049022.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729956|gb|EEU43309.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 612
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 86/142 (60%), Gaps = 1/142 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF V +QWRWP PV++ PIE G L VW+PR D H MP+ITPAY M ++
Sbjct: 259 VIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPRVYKGDSFHLMPVITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ ++ +++V+ + +I E I +GK WS LF + FF + Y+ Y+ V A +
Sbjct: 319 FNITRSSMKVINRELSRALQISESIMVGKRPWSDLFVKHTFFTQGYKYYISVISSAKSKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQ 141
D W G+VES+ R L K+EQ
Sbjct: 379 DHKIWSGYVESKVRMLVQKLEQ 400
>gi|261191352|ref|XP_002622084.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239589850|gb|EEQ72493.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239612743|gb|EEQ89730.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis ER-3]
Length = 599
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 90/156 (57%), Gaps = 2/156 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FFR+ QW+WP PV++ PIE G L VW+P+ D+ H MPIITPAY M +++
Sbjct: 260 IVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATH 319
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADADD 120
VSL T V+ + + G I + I +G+ W+ LF + FF + Y+ YL + + D
Sbjct: 320 NVSLSTKAVLLRELKRGGDIADRIFVGQLTWNDLFTRHTFFSQDYKYYLSITSASRSKDA 379
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ ++ + HP+P +
Sbjct: 380 QSVWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 414
>gi|346322043|gb|EGX91642.1| Poly(A) polymerase [Cordyceps militaris CM01]
Length = 608
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF V +QWRWP PV++ PIE G L VW+P+ D H MPIITPAY M ++
Sbjct: 259 VIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGDSFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ ++ ++ ++ + Q G I E++ +GK WS LF + FF Y+ Y+ V + +
Sbjct: 319 FNITRSSMSIIKRELQRGLEISEQVMVGKQPWSDLFVKHTFFTTGYKYYISVVSASKAKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G++ES+ R L K+EQ + L HPY Y
Sbjct: 379 PHKLWAGYIESKVRMLVQKLEQHPHIAL-AHPYVKGY 414
>gi|327357099|gb|EGE85956.1| Poly(A) polymerase PAPa [Ajellomyces dermatitidis ATCC 18188]
Length = 599
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 90/156 (57%), Gaps = 2/156 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FFR+ QW+WP PV++ PIE G L VW+P+ D+ H MPIITPAY M +++
Sbjct: 260 IVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATH 319
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADADD 120
VSL T V+ + + G I + I +G+ W+ LF + FF + Y+ YL + + D
Sbjct: 320 NVSLSTKAVLLRELKRGGDIADRIFVGQLTWNDLFTRHTFFSQDYKYYLSITSASRSKDA 379
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ ++ + HP+P +
Sbjct: 380 QSVWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 414
>gi|321249627|ref|XP_003191515.1| polynucleotide adenylyltransferase [Cryptococcus gattii WM276]
gi|317457982|gb|ADV19728.1| Polynucleotide adenylyltransferase, putative [Cryptococcus gattii
WM276]
Length = 644
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 144/314 (45%), Gaps = 58/314 (18%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG--ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
+V +FF +Y QW WP PV++ I+ G + SVW+P+ + +D++HRMP+ITPAY M S
Sbjct: 258 IVGKFFPIYYQWNWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVITPAYPSMCS 317
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEI-ELGKAEWSALFEHYPFFEAYENYLQVDIVAADA 118
++ ++ T+ ++ ++ +I +EI + + W LFE FF Y+ Y+QV A+ +
Sbjct: 318 THNITSSTMSIIRKEMLRAMQITDEILKTPGSSWIPLFEKVDFFSMYKTYVQVVASASTS 377
Query: 119 DDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
D + W G VESR R L +E +T+ ++ HP + F+ L+ +E
Sbjct: 378 DGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGV---------NRVFYCLTEEEQA 427
Query: 179 TSKECQ---------QFDFQGT------VKNFRRGIDNYRVRRE--GRDIYFSY------ 215
+ + + + D +G K+F G++ + +E GR + Y
Sbjct: 428 AASQGELTAEMIDRTEEDVEGKEHRKIYTKSFFIGLEIEKKSKESGGRVLNLFYPSKKFC 487
Query: 216 -VC-------------------RRHLPSFVFPDGYKWHRPSRHFNEQSGKPCEDVKMCQS 255
VC R LP +VFPDG + +Q+G ED M
Sbjct: 488 AVCQNWDKYNEMEMSVILRPAKRSELPPYVFPDGMPKSKKKTKRQQQNG--SEDAGMNDG 545
Query: 256 CSSERQLKRKKEHE 269
+ KR K +
Sbjct: 546 SEGQGPSKRTKSEQ 559
>gi|156342919|ref|XP_001620975.1| hypothetical protein NEMVEDRAFT_v1g176602 [Nematostella vectensis]
gi|156206500|gb|EDO28875.1| predicted protein [Nematostella vectensis]
Length = 485
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 86/144 (59%), Gaps = 3/144 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM---GELGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
L+ +FF V+++W WPNPV++ I +LGF WDPR NP DR H MPIITPAY N
Sbjct: 262 LLQKFFLVFSRWEWPNPVLLKNIPTPSENKLGFKNWDPRTNPGDRYHLMPIITPAYPQQN 321
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADA 118
S++ VS+ T ++M ++F G + E++ GKA W LF FF Y +Y+ + +
Sbjct: 322 STFNVSMSTRKIMCDEFFIGLKNTEDVISGKANWDRLFTPPNFFHKYRHYIVLSASSNTE 381
Query: 119 DDLLTWKGWVESRFRQLTLKIEQD 142
++ L W G VES+ R L +E +
Sbjct: 382 EEHLEWIGLVESKVRLLISYLENN 405
>gi|384494476|gb|EIE84967.1| hypothetical protein RO3G_09677 [Rhizopus delemar RA 99-880]
Length = 408
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSV--WDPRKNPKDRSHRMPIITPAYHCMNS 59
+V FF++ W WP+PVM+ +E G + W+P+ NP DRSHRMPIITP+Y M S
Sbjct: 259 VVYHFFQILVHWSWPSPVMLKAVEDGPPLAATRPWNPKLNPTDRSHRMPIITPSYPSMCS 318
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
++ V T +++ + + I ++I G A W+ LF+ + FFE Y YLQ+ +VA + +
Sbjct: 319 THNVIPSTQRIIMGEIKQAAEIVQKIRTGSATWARLFQSHNFFEIYMQYLQITVVADNYN 378
Query: 120 DLLTWKGWVESRFRQLTLK 138
L W G VE+R RQL L+
Sbjct: 379 LQLKWAGLVEARLRQLLLE 397
>gi|358401751|gb|EHK51049.1| hypothetical protein TRIATDRAFT_288652 [Trichoderma atroviride IMI
206040]
Length = 572
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 95/166 (57%), Gaps = 3/166 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF V QWRWP PV++ PI G L VW+P+ D H MP+ITPAY M ++
Sbjct: 259 VIVNKFFLVIGQWRWPQPVLLKPIGSGPLPVRVWNPKVYKGDSFHLMPVITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ ++ ++ ++ + + G I EEI +GK WS LF + FF + Y Y+ V + + +
Sbjct: 319 FNITRSSMTIIQRELRRGLEISEEIMVGKRPWSDLFVKHTFFTQGYRYYISVVSASKNKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 165
W G+VES+ R L K+EQ ++ L HP+ NK D C N
Sbjct: 379 AHKVWSGYVESKVRMLVQKLEQHSSIAL-AHPF-NKGYDRRHLCKN 422
>gi|341899656|gb|EGT55591.1| hypothetical protein CAEBREN_21062 [Caenorhabditis brenneri]
Length = 684
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 129/257 (50%), Gaps = 27/257 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI-----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV R F +++ W WP+PV++ + ++ L +WDPR DR H MPIITPA+
Sbjct: 284 LVHRMFFIFSTWTWPHPVLLKELNQDRNDIPTLCELIWDPRHKNTDRFHLMPIITPAFPE 343
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 116
NS++ V+ T Q++ ++ IC +I G+A+WSALFE FF Y++++ + + A
Sbjct: 344 QNSTHNVTRSTHQIIKDEIWEALEICRDIHDGRAKWSALFEEVNFFSRYKHFIALIMAAP 403
Query: 117 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 176
+ ++ L++ G++ESR R L +E++ + +L H PNK+ KP N+ F K
Sbjct: 404 NEEEELSYGGFLESRIRLLVQSLERNPDIIL-AHNDPNKH----KPSKNAKFDVSPENKR 458
Query: 177 VGT-------SKECQQFDFQGTVKNFRRGIDNYRVRREG------RDIYFSYVCRRHLPS 223
+ ++ + D ++ F+ ++ +G +I YV R +L
Sbjct: 459 ITVWFIGLEFAEHAKNLDLTNEIQRFKTNVELQASSVKGIGPTCQVEIDMFYVKRNNLIQ 518
Query: 224 FV----FPDGYKWHRPS 236
+ G +W + S
Sbjct: 519 VISAADLSRGRRWKKSS 535
>gi|312067061|ref|XP_003136565.1| hypothetical protein LOAG_00977 [Loa loa]
gi|307768265|gb|EFO27499.1| hypothetical protein LOAG_00977 [Loa loa]
Length = 859
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 94/169 (55%), Gaps = 7/169 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIE------MGELGFSVWDPRKNPKDRSHRMPIITPAYH 55
LV +FF +YT+W WP+PV++ E M L VWDPR DR H MPI+TPA+
Sbjct: 401 LVQKFFLLYTKWEWPHPVVLKETEVSHARDMPALQELVWDPRSRSGDRFHLMPIVTPAFP 460
Query: 56 CMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 115
NS++ V+ +L+++ + + G +I GKAEWSALFE FF Y+++L + ++
Sbjct: 461 QQNSTFNVTKSSLKIIMNEIEEGLVTINDIMKGKAEWSALFEEVNFFSRYKHFLALLCLS 520
Query: 116 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCP 164
A D L W G VES+ R L +E+ + CH + Y + P P
Sbjct: 521 ATEQDELVWCGLVESKIRFLIASLER-RESIRVCHVHTKYYQPRNDPLP 568
>gi|242773312|ref|XP_002478214.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
gi|218721833|gb|EED21251.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
Length = 599
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ T+W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMTKWAWPQPVLLKPIEDGPLQIKVWNPKIYHTDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ +SL T V+ + Q G I ++I + W+ LF + FF + Y+ YLQ+ + +
Sbjct: 319 HNISLSTKAVILRELQRGGDIVDKIFAKQLTWNDLFTRHTFFSKDYKYYLQITASSKTKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ N + HP+P +
Sbjct: 379 ADSVWSGLVESKLRHLVGALDRK-NIIAVAHPFPKGF 414
>gi|170051830|ref|XP_001861944.1| poly a polymerase [Culex quinquefasciatus]
gi|167872900|gb|EDS36283.1| poly a polymerase [Culex quinquefasciatus]
Length = 631
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 82/139 (58%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYK 62
V +FF V+ +W+WP PV + + LGF VWD R N +DR H MPIITPAY NS++
Sbjct: 475 VHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMPIITPAYPQPNSTFH 534
Query: 63 VSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLL 122
VS T +VM +F G +I +EI LGKA W LFE FF Y + + + + + DD L
Sbjct: 535 VSSSTRKVMLNEFNSGMQITDEIMLGKAGWDKLFEAPSFFFKYRYVIVLLVTSNNTDDHL 594
Query: 123 TWKGWVESRFRQLTLKIEQ 141
W VES+ R L +E+
Sbjct: 595 EWCEMVESKIRYLIQNLER 613
>gi|17565368|ref|NP_505683.1| Protein PAP-1 [Caenorhabditis elegans]
gi|3880758|emb|CAA16309.3| Protein PAP-1 [Caenorhabditis elegans]
Length = 655
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 113/211 (53%), Gaps = 17/211 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI-----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV R F +++ W WP+PV++ + ++ L VWDPR+ DR H MPIITPA+
Sbjct: 259 LVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRFHVMPIITPAFPE 318
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 116
NS++ V+ T V+ + IC +I GK++W+ALFE FF Y++++ + + A
Sbjct: 319 QNSTHNVTRSTATVIKNEICEALEICRDISEGKSKWTALFEEVNFFSRYKHFIALIMAAP 378
Query: 117 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 176
+ ++ L + G++ESR R L +E++ + ++ H PNK+ KP PN+ F K
Sbjct: 379 NEEEELNYGGFLESRIRLLVQSLERNQD-IIIAHNDPNKH----KPSPNAKFDVNPENKR 433
Query: 177 VGT-------SKECQQFDFQGTVKNFRRGID 200
V ++ + D ++ F+ ++
Sbjct: 434 VTVWFIGLEFAEHAKTLDLTNEIQRFKTNVE 464
>gi|451845399|gb|EMD58712.1| hypothetical protein COCSADRAFT_265597 [Cochliobolus sativus
ND90Pr]
Length = 571
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 96/168 (57%), Gaps = 2/168 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VS+FF + +W WP PVM+ IE G+LG VW+P+ DR+H MPIITPA+ M +++
Sbjct: 263 IVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYGGDRAHLMPIITPAFPSMCATH 322
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADADD 120
V TL++M ++F ++I + I G +W+ALFE + FF + ++ YL V + +
Sbjct: 323 TVMPSTLRIMKDEFGRADKILQHIFAGTKDWNALFERHSFFTKDHKYYLSVVAASRTKEA 382
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF 168
T+ G V+S+ R + I+ G+ PY N Y + C + F
Sbjct: 383 NSTFSGLVQSKIRHIVKGIDDGQTGIDTARPYIN-YFERYHRCKDDQF 429
>gi|46122023|ref|XP_385565.1| hypothetical protein FG05389.1 [Gibberella zeae PH-1]
Length = 624
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF V +QWRWP PV++ PIE G L VW+P+ D H MP+ITPAY M ++
Sbjct: 259 VIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGDTFHLMPVITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEA-YENYLQVDIVAADAD 119
+ ++ ++ ++ + + +I E I +G WS LF + FF A Y+ Y+ V A +
Sbjct: 319 FNITRSSMTIINRELKRALQISESIMVGMRPWSDLFAKHSFFTAGYKYYISVISAAKTKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G+VES+ R L K+EQ + L HP+ Y
Sbjct: 379 SHTIWSGYVESKVRMLVQKLEQHQSIAL-AHPFNKGY 414
>gi|452002314|gb|EMD94772.1| hypothetical protein COCHEDRAFT_1167952 [Cochliobolus
heterostrophus C5]
Length = 578
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 92/156 (58%), Gaps = 1/156 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VS+FF + +W WP PVM+ IE G+LG VW+P+ DR+H MPIITPA+ M +++
Sbjct: 263 IVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYGGDRAHLMPIITPAFPSMCATH 322
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADADD 120
V TL++M ++F ++I + I G +W+ALFE + FF + ++ YL V + +
Sbjct: 323 TVMPSTLRIMKDEFGRADKILQHIFAGTKDWNALFERHSFFTKDHKYYLSVVAASRTKEA 382
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
T+ G V+S+ R + I+ G+ PY N +
Sbjct: 383 NSTFSGLVQSKIRHIVKGIDDGQTGIDTARPYINYF 418
>gi|302684083|ref|XP_003031722.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
gi|300105415|gb|EFI96819.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
Length = 558
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 87/148 (58%), Gaps = 9/148 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V RFF + +W+WP PV++ IE G L +W+P+ P DR+HRMPIITP+Y MNS++
Sbjct: 255 IVRRFFGIMWRWQWPQPVLLKQIEEGPLEVRIWNPQVYPSDRAHRMPIITPSYPSMNSTH 314
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T VM +F+ G I +I+ G+A W+ LF + FF + +YLQ + A ADD
Sbjct: 315 NVSYSTQTVMIHEFKRGLDIVGQIQKGEASWADLFNKHTFFTDFRHYLQ---IVASADDQ 371
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQC 149
+ W QL L+++ ++Q
Sbjct: 372 HSHDKW------QLVLRLDAQEGSIIQV 393
>gi|121700911|ref|XP_001268720.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
gi|119396863|gb|EAW07294.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
Length = 598
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 89/157 (56%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ VS+ T V+ + Q G I ++I L + W+ LF + FF + Y+ YL + + +
Sbjct: 319 HNVSMSTKAVILRELQRGGDIVDKIFLKQMTWNDLFARHSFFTQDYKYYLSITASSKTKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ N + HP+P +
Sbjct: 379 AESVWSGLVESKIRHLVGALDRK-NTIAVAHPFPKGF 414
>gi|408391167|gb|EKJ70549.1| hypothetical protein FPSE_09302 [Fusarium pseudograminearum CS3096]
Length = 711
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF V +QWRWP PV++ PIE G L VW+P+ D H MP+ITPAY M ++
Sbjct: 259 VIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGDTFHLMPVITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEA-YENYLQVDIVAADAD 119
+ ++ ++ ++ + + +I E I +G WS LF + FF A Y+ Y+ V A +
Sbjct: 319 FNITRSSMTIINRELKRALQISESIMVGMRPWSDLFAKHSFFTAGYKYYISVISAAKTKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G+VES+ R L K+EQ + L HP+ Y
Sbjct: 379 SHTIWSGYVESKVRMLVQKLEQHQSIAL-AHPFNKGY 414
>gi|400594797|gb|EJP62626.1| Poly(A) polymerase pla1 [Beauveria bassiana ARSEF 2860]
Length = 593
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF V +QWRWP PV++ PIE G L VW+P+ D H MPIITPAY M ++
Sbjct: 263 VIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGDSFHLMPIITPAYPSMCAT 322
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ ++ ++ ++ + Q G I E++ +GK W+ LF + FF Y+ Y+ V + D
Sbjct: 323 FNITRSSMTIIKRELQRGLEITEQVMVGKQSWNDLFVKHTFFTTGYKYYISVVSASKARD 382
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G++ES+ R L K+E + L HP+ Y
Sbjct: 383 AHKLWSGYIESKVRMLVQKLEHHPHIAL-AHPFVKGY 418
>gi|405977001|gb|EKC41474.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 323
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 108/219 (49%), Gaps = 5/219 (2%)
Query: 15 WPNPVMMCPI---EMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVM 71
WP PV++ + L F VWDPR N D H MPIITP Y N+++ V+L + +M
Sbjct: 3 WPQPVLLKSLVHENKHNLSFPVWDPRVNTSDMFHLMPIITPTYPHENTTFTVTLSSRSIM 62
Query: 72 TEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESR 131
TE+ + G I +I G+ EW ALFE FF+ Y++YL + + + D L W G+ ES+
Sbjct: 63 TEELKDGFEIVSKIYEGREEWGALFEPSNFFQKYKHYLVLTVSTVEEKDYLEWHGYAESK 122
Query: 132 FRQLTLKIEQD-TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTSKECQ-QFDFQ 189
R L +E++ L HP P ++ S +F GL+ ++ FD Q
Sbjct: 123 LRLLIGNLERNPCIKLAHVHPSPLGPLNESDDEHLCRWFIGLTFVKIENQNFVDLTFDIQ 182
Query: 190 GTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 228
+ + + ++G + +V RR L +V P+
Sbjct: 183 SFTNTVHKQAYHINLMKDGMKVKIKHVKRRQLGLYVPPE 221
>gi|330915746|ref|XP_003297151.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
gi|311330327|gb|EFQ94750.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
Length = 566
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 90/152 (59%), Gaps = 1/152 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VS+FF + +W WP PVM+ IE G++G VW+P+ DR+H MPIITPA+ M +++
Sbjct: 263 IVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDRAHLMPIITPAFPSMCATH 322
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADADD 120
V TL++M E+F ++I ++I K +W ALFE + FF + ++ YL V + +
Sbjct: 323 TVMPSTLRIMKEEFGRADKILQDIFANKKDWKALFERHTFFTKDHKYYLSVVAASRTKEA 382
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
T+ G V+S+ R + I+ G+ PY
Sbjct: 383 NSTFSGLVQSKIRHIIKGIDDGNTGIATARPY 414
>gi|326484929|gb|EGE08939.1| Poly(A) polymerase PAPalpha [Trichophyton equinum CBS 127.97]
Length = 601
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ QW WP PV++ IE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEA-YENYLQVDIVAADAD 119
+ VS+ T V+ + + G + ++I +G+ WS LF + FF A Y+ YL ++ + +
Sbjct: 319 HNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYLSINSTSTSKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ ++ + HP+P +
Sbjct: 379 AQAIWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 414
>gi|327293141|ref|XP_003231267.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
gi|326466383|gb|EGD91836.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
Length = 601
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ QW WP PV++ IE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEA-YENYLQVDIVAADAD 119
+ VS+ T V+ + + G + ++I +G+ WS LF + FF A Y+ YL ++ + +
Sbjct: 319 HNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYLSINSTSTSKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ ++ + HP+P +
Sbjct: 379 AQAIWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 414
>gi|156405096|ref|XP_001640568.1| predicted protein [Nematostella vectensis]
gi|156227703|gb|EDO48505.1| predicted protein [Nematostella vectensis]
Length = 486
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 90/158 (56%), Gaps = 4/158 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM---GELGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
L+ +FF V+++W WPNPV++ I +LGF +WDPR NP DR H MPIITPAY N
Sbjct: 264 LLQKFFLVFSRWEWPNPVLLKNIPTPSENKLGFQIWDPRTNPGDRYHLMPIITPAYPQQN 323
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADA 118
S+ VS+ T ++M ++F + E++ GKA W LF FF Y++Y+ + +
Sbjct: 324 FSFSVSMSTRKIMCDEFFIRLKNTEDVISGKANWDILFTPPNFFHKYKHYIVLSASSNTE 383
Query: 119 DDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
++ L W G VES+ R L +E + L H P Y
Sbjct: 384 EEHLEWIGLVESKVRLLISYLENNEYIKL-AHVNPKSY 420
>gi|212531585|ref|XP_002145949.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
gi|210071313|gb|EEA25402.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
Length = 599
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ T+W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMTKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ +SL T V+ + Q G + ++I + W+ LF + FF + Y+ YLQ+ + +
Sbjct: 319 HNISLSTKAVILRELQRGGDMVDKIFAKQLTWNDLFTRHTFFSKDYKYYLQITASSKTKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ N + HP+P +
Sbjct: 379 AESVWSGLVESKLRHLVGALDRK-NIIAIAHPFPKGF 414
>gi|326471772|gb|EGD95781.1| Poly(A) polymerase PAPalpha [Trichophyton tonsurans CBS 112818]
Length = 601
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ QW WP PV++ IE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEA-YENYLQVDIVAADAD 119
+ VS+ T V+ + + G + ++I +G+ WS LF + FF A Y+ YL ++ + +
Sbjct: 319 HNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYLSINSTSTSKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ ++ + HP+P +
Sbjct: 379 AQAIWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 414
>gi|63101121|gb|AAY33178.1| PAPa [Candida parapsilosis]
gi|354544642|emb|CCE41367.1| hypothetical protein CPAR2_303560 [Candida parapsilosis]
Length = 552
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++ +FF++Y+QW WP PV++ IE G L VW+PR DR HRMP+ITPAY M ++
Sbjct: 253 VILEKFFQIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYL-QVDIVAADAD 119
+ ++ T +++ +F G I + G+ WS L E + FF Y+ YL V ++ +
Sbjct: 313 HNITSSTQKIIMSEFDRGVEIMNGVVSGQKSWSDLLERHDFFHKYKFYLCVVAATKSNTE 372
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
+ + G VES+ R L K+EQ G+ HPY +
Sbjct: 373 EHSKYSGMVESKLRLLVQKLEQ-VEGVELAHPYVKSF 408
>gi|1256822|gb|AAC52586.1| poly(A) polymerase III [Mus musculus]
Length = 375
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 70/105 (66%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 327
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYE 106
VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y+
Sbjct: 328 NVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYK 372
>gi|345490104|ref|XP_003426299.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Nasonia vitripennis]
Length = 383
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 121/246 (49%), Gaps = 5/246 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRS--HRMPIITPAYHCMNS 59
L+ +FF +++ W WP PV++ ++ LG VWDPR N DR H MPIITPAY NS
Sbjct: 139 LIEKFFLIFSIWEWPRPVLLKSVKKVNLGLQVWDPRVNASDRPPYHLMPIITPAYPQQNS 198
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
++ V++ T +M E + I ++I +GKA W LFE FF+ ++++ + +
Sbjct: 199 TFNVTISTRTIMEEAIKTVLAITKDIAMGKASWDKLFEPSNFFDEXKHFVILSASSLTNK 258
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY--IDPSKPCPNSAFFWGLSRKEV 177
+ W G++ES+ R L +++ N + H P + + P + + GL+ ++
Sbjct: 259 MSIEWSGFIESKIRHLIGSFDRNPN-ITFAHINPKSFPPLKPEEDEHGCMWLIGLTFRKA 317
Query: 178 GTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSR 237
D + +K + + ++G YV R++L +++ + K R +
Sbjct: 318 EKLSIDLTSDIKSFIKTTEGQVKKSNLFKDGMSQEAKYVRRKNLSNYIAANQIKRGRKTS 377
Query: 238 HFNEQS 243
+Q+
Sbjct: 378 SSTQQN 383
>gi|342870120|gb|EGU73417.1| hypothetical protein FOXB_16055 [Fusarium oxysporum Fo5176]
Length = 635
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF V +QWRWP PV++ PIE G L +W+P+ D H MP+ITPAY M ++
Sbjct: 259 VIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRIWNPKLYKGDTYHLMPVITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEA-YENYLQVDIVAADAD 119
+ ++ ++ ++ + + +I E I +GK WS LF + FF A Y+ Y+ V A +
Sbjct: 319 FNITRSSMAIINRELKRALQISESIMVGKRPWSDLFVKHTFFTAGYKYYISVTSAAKTKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G+VES+ R L K+EQ + L H + Y
Sbjct: 379 AHTIWSGYVESKVRMLVQKLEQHQSIAL-AHAFNKGY 414
>gi|399218218|emb|CCF75105.1| unnamed protein product [Babesia microti strain RI]
Length = 501
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 120/230 (52%), Gaps = 17/230 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM-----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
++ +FF+VY W W PV++ I+ G + F VWDP+ NP+DR H MPIITPA+
Sbjct: 262 IIHKFFKVYMLWNWKYPVVINKIKQPVNVPGLMMFKVWDPKTNPQDRLHLMPIITPAFPA 321
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 116
MNS++ V+ T +VM +F+ + + + + W+ L E F ++++L + +VA+
Sbjct: 322 MNSTHNVTNTTKRVMINEFKRAHELLK--TQSQMTWNDLLEPANIFNEFKHFLVIIVVAS 379
Query: 117 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSA-FFWGLSRK 175
D W GW+ESR R L K+E + L+ P+ DP NS F GLS
Sbjct: 380 DEKAHSKWHGWIESRIRFLIRKLEAIEHTELRPWPHSITMEDPD--WTNSKWIFIGLSYN 437
Query: 176 EVGTSKECQQFDFQGTVKNFRRGIDNYR--VRREGR-DIYFSYVCRRHLP 222
+ E QFD + +K F+ I +++ E + D+ Y+ + LP
Sbjct: 438 KT----EESQFDIRTPIKEFKNLIFSWQELTSYESKVDVRIEYMKKSQLP 483
>gi|17536297|ref|NP_496067.1| Protein T15H9.6 [Caenorhabditis elegans]
gi|3879808|emb|CAA87419.1| Protein T15H9.6 [Caenorhabditis elegans]
Length = 554
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 106/195 (54%), Gaps = 13/195 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI-----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ + F +++ W WP PV++ I ++ +L VWDPR+N DR H MPIITPA+
Sbjct: 261 LIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNHADRYHLMPIITPAFPQ 320
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 116
NS++ VS +++V+ ++ + IC++I G EW L E FF Y +++ + + A
Sbjct: 321 QNSTHNVSRSSMKVIQDEMKKALIICDKIHEGTLEWRDLLEEINFFSKYHHFIALKLKAE 380
Query: 117 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY-PNKYIDPSKPCPNSAFFWGL--- 172
+ L + G+ ESR RQL +E+ N ++Q P K+ D P S +F GL
Sbjct: 381 SVKEELAFGGFFESRIRQLVQILEK--NQVIQVAQINPRKFKDVKDP-KKSIWFIGLEFV 437
Query: 173 -SRKEVGTSKECQQF 186
+ K V + + QQF
Sbjct: 438 ANVKNVDLTSDIQQF 452
>gi|308510522|ref|XP_003117444.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
gi|308242358|gb|EFO86310.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
Length = 513
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 116/229 (50%), Gaps = 12/229 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIE----MGELGFSVWDPRKNPKDRSHRMPIITPAYHCM 57
L+ + F V++ W WP+PV++ +E M L VWDPR+N DR H MPIITP++
Sbjct: 239 LIQKVFFVFSTWNWPSPVILKHMENRFDMQNLSQLVWDPRRNYADRLHLMPIITPSFPEQ 298
Query: 58 NSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAAD 117
NS++ VS TLQV+ + + +ICE ++ GKA W L E FF Y + + V I A
Sbjct: 299 NSTHNVSRSTLQVIQNEMKEAFKICEHVQKGKATWKDLLEETNFFCKYRHLIAVSINAEK 358
Query: 118 ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEV 177
+ + G+ ESR RQL +E+++ + K+ P P S +F GL +
Sbjct: 359 EKEDTDFAGFFESRIRQLVQLLERNSQVQI-AQVNTRKFKAPFSPG-KSQWFIGLEFIQA 416
Query: 178 GTSKECQQFDFQGTVKNFRRGIDNYRVRREGR-DIYFSYVCRRHLPSFV 225
+ D +K F++ I N + G I +YV + L +++
Sbjct: 417 A-----KNLDLTEEIKRFKKIIGNQAKEKIGTVQIDAAYVKKSKLITYI 460
>gi|189208746|ref|XP_001940706.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187976799|gb|EDU43425.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 579
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 89/152 (58%), Gaps = 1/152 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VS+FF + +W WP PVM+ IE G++G VW+P+ DR+H MPIITPA+ M +++
Sbjct: 263 IVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDRAHLMPIITPAFPSMCATH 322
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADADD 120
V TL++M E+F + I ++I K +W ALFE + FF + ++ YL V + +
Sbjct: 323 TVMPSTLRIMKEEFGRADSILQDIFANKKDWKALFERHTFFTKDHKYYLSVVAASRTKEA 382
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
T+ G V+S+ R + I+ G+ PY
Sbjct: 383 NSTFSGLVQSKIRHIIKGIDDGNTGIATARPY 414
>gi|134107007|ref|XP_777816.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260514|gb|EAL23169.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 643
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 143/314 (45%), Gaps = 58/314 (18%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG--ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
+V +FF +Y QW WP PV++ I+ G + SVW+P+ + +D++HRMP+ITPAY M S
Sbjct: 259 IVGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVITPAYPSMCS 318
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEI-ELGKAEWSALFEHYPFFEAYENYLQVDIVAADA 118
++ ++ T+ ++ ++ +I +EI + + W LFE FF Y+ Y+QV A+ +
Sbjct: 319 THNITSSTMSIIRKEMLRAMQITDEILKTPDSSWIPLFEKVDFFSMYKTYVQVVASASTS 378
Query: 119 DDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
D + W G VESR R L +E +T+ ++ HP + F+ L+ +E
Sbjct: 379 DGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGV---------NRVFYCLTEEEQA 428
Query: 179 TSKE----CQQFD-FQGTVKN----------FRRGIDNYRVRRE--GRDIYFSY------ 215
+ + + D + VKN F G++ + +E GR + Y
Sbjct: 429 AASQGELTAEMIDRTEEDVKNREHRKIYTKSFFIGLEIEKKSKETGGRVLNLFYPSKKFC 488
Query: 216 -VC-------------------RRHLPSFVFPDGYKWHRPSRHFNEQSGKPCEDVKMCQS 255
VC R LPS+VFPDG + +Q+G D M
Sbjct: 489 AVCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGMPKSKKKTKRQQQNG--SGDAGMNDG 546
Query: 256 CSSERQLKRKKEHE 269
+ KR K +
Sbjct: 547 SEGQGPSKRTKSEQ 560
>gi|58258863|ref|XP_566844.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222981|gb|AAW41025.1| polynucleotide adenylyltransferase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 642
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 93/153 (60%), Gaps = 4/153 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG--ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
+V +FF +Y QW WP PV++ I+ G + SVW+P+ + +D++HRMP+ITPAY M S
Sbjct: 258 IVGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVITPAYPSMCS 317
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEI-ELGKAEWSALFEHYPFFEAYENYLQVDIVAADA 118
++ ++ T+ ++ ++ +I +EI + + W LFE FF Y+ Y+QV A+ +
Sbjct: 318 THNITSSTMSIIRKEMLRAMQITDEILKTPDSSWIPLFEKVDFFSMYKTYVQVVASASTS 377
Query: 119 DDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHP 151
D + W G VESR R L +E +T+ ++ HP
Sbjct: 378 DGIKDWSGMVESRIRTLVGDLE-NTDCIITAHP 409
>gi|405117907|gb|AFR92682.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
grubii H99]
Length = 644
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 143/314 (45%), Gaps = 58/314 (18%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG--ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
++ +FF +Y QW WP PV++ I+ G + SVW+P+ + +D++HRMP+ITPAY M S
Sbjct: 258 IIGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRMPVITPAYPSMCS 317
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEI-ELGKAEWSALFEHYPFFEAYENYLQVDIVAADA 118
++ ++ T+ ++ ++ +I +EI + + W LFE FF Y+ Y+QV A+ +
Sbjct: 318 THNITSSTMSIIRKEMLRAMQITDEILKTPDSSWIPLFEKVDFFSMYKTYVQVVASASTS 377
Query: 119 DDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
D + W G VESR R L +E +T+ ++ HP + F+ L+ +E
Sbjct: 378 DGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGV---------NRLFYCLTEEEQA 427
Query: 179 TSKECQ---------QFDFQGT------VKNFRRGIDNYRVRRE--GRDIYFSY------ 215
+ + + + D + K+F G++ + +E GR + Y
Sbjct: 428 AASQGELTAEMIDRTEEDVKDKEHRKIYTKSFFIGLEIEKKSKETGGRVLNLFYPSKKFC 487
Query: 216 -VC-------------------RRHLPSFVFPDGYKWHRPSRHFNEQSGKPCEDVKMCQS 255
VC R LPS+VFPDG + +Q+G D M
Sbjct: 488 AVCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGMPKSKKKTKRQQQNG--SGDAGMNDG 545
Query: 256 CSSERQLKRKKEHE 269
+ KR K +
Sbjct: 546 SEGQGPSKRTKSEQ 559
>gi|322695698|gb|EFY87502.1| Poly(A) polymerase [Metarhizium acridum CQMa 102]
Length = 570
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF V +QWRWP PV++ PIE G L VW+P+ D H MP+ITPAY M ++
Sbjct: 259 VIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPKIYKGDSFHLMPVITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEA-YENYLQVDIVAADAD 119
+ +S ++ ++ + + G I E I +GK WS LF + FF + Y+ Y+ V + +
Sbjct: 319 FNISRSSMAIINRELRRGLEISESIMVGKQPWSDLFVKHTFFTSDYKYYISVISASKSKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G+VES+ R L K+EQ + L H + Y
Sbjct: 379 AHNVWSGYVESKVRMLVQKLEQHPSIAL-AHAFNKGY 414
>gi|396488901|ref|XP_003842971.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
gi|312219549|emb|CBX99492.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
Length = 577
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 88/153 (57%), Gaps = 1/153 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VS+FF + +W WP PV++ IE G +G VW+P+ DRSH MPIITPA+ M S++
Sbjct: 261 IVSKFFSLMQKWSWPRPVLLKHIEEGAMGLRVWNPQIYHGDRSHLMPIITPAFPSMCSTH 320
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADADD 120
V TL++M E+FQ ++I + I G W ALFE + FF + ++ YL + + +
Sbjct: 321 TVMPSTLRIMQEEFQRADQIMQHIFAGTKTWDALFERHSFFTKDHKYYLTIVAASRTQEA 380
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYP 153
+ G V+S+ R + I+ G+ PYP
Sbjct: 381 HERFNGLVQSKVRHIVKGIDDGQTGIDTARPYP 413
>gi|341899657|gb|EGT55592.1| hypothetical protein CAEBREN_22785 [Caenorhabditis brenneri]
Length = 630
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 136/284 (47%), Gaps = 37/284 (13%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI-----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV R F +++ W WP+PV++ ++ L VWDP K D+ H MPIITPA+
Sbjct: 259 LVHRMFFIFSTWTWPHPVLLKFAAKDRNDIPALCKLVWDPEKKSSDKFHLMPIITPAFPE 318
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 116
NS++ V+ + Q++ ++ ICE+I GKA+W LFE FF Y++++ + + A
Sbjct: 319 QNSTHNVTRSSSQIIKDEIWEALEICEQINDGKAKWKDLFEEVNFFSRYKHFIALIMAAP 378
Query: 117 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF-------- 168
+ ++ L++ G++ESR R L +E++ + +L H PNK+ KP N+ F
Sbjct: 379 NEEEELSYGGFLESRIRLLVQSLERNPDIIL-AHNDPNKH----KPSKNAKFDVSPENKR 433
Query: 169 ----FWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREG------RDIYFSYVCR 218
F GL E TS D ++ F+ + +G +I +V +
Sbjct: 434 ITVWFIGLEFSEHATS-----LDLTNEIQRFKTNFELQASSVKGIGPTCQVEIDMFHVKQ 488
Query: 219 RHLPSFV----FPDGYKWHRPSRHFNEQSGKPCEDVKMCQSCSS 258
R+L + G +W + S+ N+ + V S SS
Sbjct: 489 RNLIQVISAADLSRGRRWKKSSKKQNKGNSSNKLTVARTASTSS 532
>gi|358383352|gb|EHK21019.1| hypothetical protein TRIVIDRAFT_78180 [Trichoderma virens Gv29-8]
Length = 575
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 93/166 (56%), Gaps = 3/166 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF V QWRWP PV++ PI G L VW+P+ D H MP+ITPAY M ++
Sbjct: 263 VIVNKFFLVIGQWRWPQPVLLKPIGSGPLPVRVWNPKVYKGDSFHLMPVITPAYPSMCAT 322
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEA-YENYLQVDIVAADAD 119
+ ++ ++ V+ + + G I E+I +GK WS LF + FF + Y Y+ V + D +
Sbjct: 323 FNITRSSMSVIQRELRRGLEISEQIMVGKRPWSDLFVKHTFFTSGYRYYISVVSASKDKE 382
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 165
W G+VES+ R L K+EQ + L H + NK D C N
Sbjct: 383 AHKVWSGYVESKVRMLVQKLEQHPSIAL-AHAF-NKGYDRRHRCKN 426
>gi|345492821|ref|XP_001602912.2| PREDICTED: poly(A) polymerase gamma-like [Nasonia vitripennis]
Length = 605
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 140/313 (44%), Gaps = 32/313 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V++QW+WP PV++ E LGF VWDPR DR+
Sbjct: 273 LIEKFFLVFSQWKWPQPVLLKSPENVNLGFQVWDPRVTMSDRT----------------- 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
+M E F+ G I EEI +GKA W LFE FF Y +Y+ + ++ A+D
Sbjct: 316 --------IMQEAFETGLAITEEIIMGKASWDKLFEPPNFFGKYRHYIVLLASSSTAEDQ 367
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY--IDPSKPCPNSAFFWGLSRKEVGT 179
L W G VES+ R L +E++ N L H P + + P S +F GL+ K+
Sbjct: 368 LEWCGLVESKIRHLIGTLERNPNITL-AHINPESFPPLKPEAGKHVSMWFIGLTFKKGEN 426
Query: 180 SKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHF 239
D + V+ R + ++ + G I +V R+ L +++ + K R +
Sbjct: 427 LNIDLTMDIKSFVETTERQAEQIKLFKNGMTIEAKHVKRKDLSNYIAANQIKRERKTSSS 486
Query: 240 NEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISSEVPQPVSPGMTTE 299
+++G + + ++ L+++K + E DK K I Q P TT+
Sbjct: 487 TQRNGNSSGNGGVSPRNQGDQTLRKRKSDQSLESN-DKKRK---IQDSEQQHQHPQSTTQ 542
Query: 300 DPTNNSEVMSSGG 312
+ + V+ S G
Sbjct: 543 QKEDGTLVVQSCG 555
>gi|1709575|sp|P51006.1|PAPO3_XENLA RecName: Full=Poly(A) polymerase type 3; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|643648|gb|AAC59747.1| poly(A) polymerase type 3, partial [Xenopus laevis]
Length = 400
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADA 118
VS+ T VM E+F+ G I +EI L KAEWS LF+ FF+ Y+ Y+ +++A A
Sbjct: 325 NVSVSTRAVMVEEFKQGLAITDEILLLKAEWSKLFDAPNFFQKYK-YVFYNLLAMFA 380
>gi|340514098|gb|EGR44367.1| predicted protein [Trichoderma reesei QM6a]
Length = 620
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 3/166 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF V QWRWP PV++ PI+ G L VW+P+ D H MP+ITPAY M ++
Sbjct: 259 VIVNKFFLVIGQWRWPQPVLLKPIDSGPLPVRVWNPKVYKGDSFHLMPVITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEA-YENYLQVDIVAADAD 119
+ ++ ++ ++ + + G I E+I +GK WS LF + FF + Y Y+ V + D +
Sbjct: 319 FNITRSSMTIIQRELRRGLEISEQIMVGKRPWSDLFVKHTFFTSGYRYYISVISASKDKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 165
W G+VES+ R L K+EQ + L H + NK D C N
Sbjct: 379 AHKIWSGYVESKVRMLVQKLEQHPSIAL-AHAF-NKGYDRRHLCRN 422
>gi|238484201|ref|XP_002373339.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
gi|83765996|dbj|BAE56139.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701389|gb|EED57727.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
Length = 609
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 88/157 (56%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ VS+ T V+ + Q G I ++I L + W+ LF + FF Y+ YL + + +
Sbjct: 319 HNVSMSTKTVILRELQRGGDIVDKIFLKQNTWNDLFARHSFFTRDYKYYLSITASSRTKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ + + HP+P +
Sbjct: 379 AEAVWSGLVESKIRHLVGALDRKST-IAVAHPFPKGF 414
>gi|755872|gb|AAA64708.1| poly(A) polymerase [Xenopus laevis]
Length = 394
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 265 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 324
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADA 118
VS+ T VM E+F+ G I +EI L KAEWS LF+ FF+ Y+ Y+ +++A A
Sbjct: 325 NVSVSTRAVMVEEFKQGLAITDEILLLKAEWSKLFDAPNFFQKYK-YVFYNLLAMFA 380
>gi|317140350|ref|XP_001818141.2| poly(A) polymerase pla1 [Aspergillus oryzae RIB40]
gi|391870730|gb|EIT79906.1| poly(A) polymerase [Aspergillus oryzae 3.042]
Length = 599
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 88/157 (56%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ VS+ T V+ + Q G I ++I L + W+ LF + FF Y+ YL + + +
Sbjct: 319 HNVSMSTKTVILRELQRGGDIVDKIFLKQNTWNDLFARHSFFTRDYKYYLSITASSRTKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ + + HP+P +
Sbjct: 379 AEAVWSGLVESKIRHLVGALDRKST-IAVAHPFPKGF 414
>gi|119494846|ref|XP_001264225.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
gi|119412387|gb|EAW22328.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
Length = 603
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 88/157 (56%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ +S+ T V+ + Q G I ++I L + W+ LF + FF + Y+ YL + + +
Sbjct: 319 HNISMSTKAVILRELQRGGDIVDKIFLKQLTWNDLFARHSFFTQDYKYYLSITASSRTKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ + HP+P +
Sbjct: 379 AEAVWSGLVESKIRHLVGALDRKPT-IAVAHPFPKGF 414
>gi|322709453|gb|EFZ01029.1| Poly(A) polymerase [Metarhizium anisopliae ARSEF 23]
Length = 572
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF V +QWRWP PV++ PIE G L VW+P+ D H MP+ITPAY M ++
Sbjct: 259 VIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPKIYKGDSFHLMPVITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEA-YENYLQVDIVAADAD 119
+ +S ++ ++ + + G I E I +GK WS LF + FF + Y+ Y+ V + +
Sbjct: 319 FNISRSSMAIINRELRRGLEISESIMVGKRPWSDLFVKHTFFTSDYKYYISVISASKSKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G+VES+ R L K+EQ + L H + Y
Sbjct: 379 AHNVWSGYVESKVRMLVQKLEQHPSIAL-AHAFNKGY 414
>gi|429328821|gb|AFZ80581.1| poly A polymerase, putative [Babesia equi]
Length = 523
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 125/257 (48%), Gaps = 14/257 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM-----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ +FFRVY+ W W PV +C I+ G + F VWDP+ NP DR H MPIITPA+
Sbjct: 262 LIEKFFRVYSLWNWKIPVTLCKIKQVPNLPGFMSFKVWDPQNNPHDRQHLMPIITPAFPS 321
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAE-WSALFEHYPFFEAYENYLQVDIVA 115
MNS++ V+ T +VMT++ + I + K + + E F +Y+++L +++
Sbjct: 322 MNSTHNVTATTKRVMTDELKRARDILKSPNTPKNQLLELVLEEEDIFSSYKHFLIIEVYG 381
Query: 116 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPN--KYIDPSKPCPNSAFFWGLS 173
A W+GW+ SR R L K+E N Q P P K+ D +SAFF
Sbjct: 382 ASEHAHGKWEGWIGSRMRFLIKKLENLPNT--QIRPLPGFFKFEDSEWEYASSAFFALKC 439
Query: 174 RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRD---IYFSYVCRRHLPSFVFPDGY 230
+ + + D + ++++F+ I+ + +D + +V LP +V
Sbjct: 440 LSNDKSGQGSKVLDIRSSIQSFKDIINGWTDMENLKDQIKVNIRHVKSSQLPDYVQAKNS 499
Query: 231 KWHRPSRHFNEQSGKPC 247
K RP E+S + C
Sbjct: 500 K-KRPLDEQLEKSKRVC 515
>gi|70996294|ref|XP_752902.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|66850537|gb|EAL90864.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|159131656|gb|EDP56769.1| poly(A) polymerase Pap [Aspergillus fumigatus A1163]
Length = 580
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 88/157 (56%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ +S+ T V+ + Q G I ++I L + W+ LF + FF + Y+ YL + + +
Sbjct: 319 HNISMSTKAVILRELQRGGDIVDKIFLKQLTWNDLFARHSFFTQDYKYYLSITASSRTKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ + HP+P +
Sbjct: 379 AEAVWSGLVESKIRHLVGALDRKPT-IAVAHPFPKGF 414
>gi|350638725|gb|EHA27081.1| hypothetical protein ASPNIDRAFT_46294 [Aspergillus niger ATCC 1015]
Length = 579
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ VS+ T V+ + Q G I ++I L + W LF + FF + Y+ YL + + +
Sbjct: 319 HNVSMSTKAVILRELQRGGDIVDKIFLKQLRWEDLFARHTFFTKDYKYYLSITASSRTKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ + HP+P +
Sbjct: 379 AESVWSGLVESKIRHLVGALDRKAT-IAIAHPFPKGF 414
>gi|358370159|dbj|GAA86771.1| poly(A) polymerase Pap [Aspergillus kawachii IFO 4308]
Length = 598
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ VS+ T V+ + Q G I ++I L + W LF + FF + Y+ YL + + +
Sbjct: 319 HNVSMSTKAVILRELQRGGDIVDKIFLKQLRWEDLFARHTFFTKDYKYYLSITASSRTKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ + HP+P +
Sbjct: 379 AESVWSGLVESKIRHLVGALDRKAT-IAIAHPFPKGF 414
>gi|134055882|emb|CAK44143.1| unnamed protein product [Aspergillus niger]
Length = 393
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 50 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 109
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ VS+ T V+ + Q G I ++I L + W LF + FF + Y+ YL + + +
Sbjct: 110 HNVSMSTKAVILRELQRGGDIVDKIFLKQLRWEDLFARHTFFTKDYKYYLSITASSRTKE 169
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ + HP+P +
Sbjct: 170 AESVWSGLVESKIRHLVGALDRKAT-IAIAHPFPKGF 205
>gi|170593997|ref|XP_001901750.1| Poly polymerase central domain containing protein [Brugia malayi]
gi|158590694|gb|EDP29309.1| Poly polymerase central domain containing protein [Brugia malayi]
Length = 842
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 92/169 (54%), Gaps = 7/169 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIE------MGELGFSVWDPRKNPKDRSHRMPIITPAYH 55
LV +FF +YT+W WP+PV++ E M L VWDPR DR H MPI+TPA+
Sbjct: 397 LVQKFFLLYTKWEWPHPVVLKETEISHARDMPSLQELVWDPRSRSGDRFHLMPIVTPAFP 456
Query: 56 CMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVA 115
NS++ V+ +L+++ + + G +I GK WSALFE FF Y+++L + ++
Sbjct: 457 QQNSTFNVTKSSLKIIMNEIEEGLVTINDIMKGKTGWSALFEEVNFFSRYKHFLALLCLS 516
Query: 116 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCP 164
A D L W G VES+ R L +E+ + CH + Y + P P
Sbjct: 517 ATEQDELVWCGLVESKIRFLIASLER-RESIRVCHVHTKYYQPRNDPFP 564
>gi|296820828|ref|XP_002849998.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
gi|238837552|gb|EEQ27214.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
Length = 593
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 89/157 (56%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ QW WP PV++ IE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 276 VIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 335
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEA-YENYLQVDIVAADAD 119
+ +S+ T V+ + + G + + I +G+ WS LF + FF Y+ YL ++ + +
Sbjct: 336 HNISMSTKAVILRELRRGGDMVDNIFVGQRRWSDLFARHSFFSGDYKYYLSINSTSTTKE 395
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ ++ + HP+P +
Sbjct: 396 AQAIWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 431
>gi|317026523|ref|XP_001389757.2| poly(A) polymerase Pap [Aspergillus niger CBS 513.88]
Length = 428
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 89 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 148
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ VS+ T V+ + Q G I ++I L + W LF + FF + Y+ YL + + +
Sbjct: 149 HNVSMSTKAVILRELQRGGDIVDKIFLKQLRWEDLFARHTFFTKDYKYYLSITASSRTKE 208
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ + HP+P +
Sbjct: 209 AESVWSGLVESKIRHLVGALDRKAT-IAIAHPFPKGF 244
>gi|115397689|ref|XP_001214436.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
gi|114192627|gb|EAU34327.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
Length = 599
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 89/157 (56%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ VS+ T V+ + Q G + ++I + + W+ LF + FF + Y+ YL++ + +
Sbjct: 319 HNVSMSTKNVILRELQRGGDMVDKIFMKQLTWNDLFARHSFFTKDYKYYLRITAASTTKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ + HP+P +
Sbjct: 379 ADSVWSGLVESKIRHLVGALDRKPT-IAVAHPFPKGF 414
>gi|67517193|ref|XP_658478.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|40746747|gb|EAA65903.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|259488841|tpe|CBF88615.1| TPA: poly(A) polymerase Pap (AFU_orthologue; AFUA_1G15340)
[Aspergillus nidulans FGSC A4]
Length = 601
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 110/226 (48%), Gaps = 15/226 (6%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ PIE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 261 VIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 320
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ +S+ T V+ + Q G I ++I +A W+ LF+ + FF Y+ YL V + +
Sbjct: 321 HNISMSTKAVILRELQRGGDIVDKIWAKQATWNDLFKKHSFFTNDYKYYLGVTASSRTKE 380
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY--------IDPSKPCPNSAFFWG 171
W G VES+ R L +++ + HP+P + + ++ N + +
Sbjct: 381 AESVWSGLVESKVRHLVGALDRKPT-IAVAHPFPKGFERIHIVSNEEEAEAVKNGSLKYQ 439
Query: 172 LSRKEVGTSKECQQFDFQGTVKNFRRGID-----NYRVRREGRDIY 212
+ T+ E + Q ++ R D N +GR IY
Sbjct: 440 DKGTKTETTDEIKDAAHQAAAQSGREDTDVPGAANNTAANDGRIIY 485
>gi|169598326|ref|XP_001792586.1| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
gi|160704377|gb|EAT90176.2| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
Length = 575
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 91/158 (57%), Gaps = 3/158 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDP--RKNPKDRSHRMPIITPAYHCMNS 59
++S+FF + +W+WP PVM+ E+ E G VW+P + P D H MP+ITPA+ M S
Sbjct: 261 ILSKFFNLMHKWQWPRPVMLKEHELPEFGLRVWNPAHQSYPPDARHLMPVITPAFPAMCS 320
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADA 118
++ V+ T Q+M E+FQ ++I ++ G+ W ALF ++ FF + ++ YL V +
Sbjct: 321 THTVTTSTKQIMMEEFQRADKIVRDVFNGQGTWEALFNNHSFFTQDHKYYLSVIAASRTK 380
Query: 119 DDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
+ LT+ G V+S+ R L I+ G+ P+P +
Sbjct: 381 EADLTFHGLVQSKVRLLVAGIDDGQTGIDMARPFPEGF 418
>gi|294939386|ref|XP_002782444.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239894050|gb|EER14239.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 553
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 124/246 (50%), Gaps = 28/246 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHCM 57
LV RFF + ++W W NPV +CPI E+G + F VW+P++ DRSH MP+ITPA+ M
Sbjct: 266 LVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPKQYASDRSHLMPVITPAFPSM 325
Query: 58 NSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAAD 117
NS+Y V+ T +++ + + +++ + + +W L +PFF Y Y+Q+ + A
Sbjct: 326 NSTYNVTETTKRIIMGEIERAHKLTLP-KKEQVDWELLCHKFPFFCNYLYYVQIRVSALS 384
Query: 118 ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNK--YIDPSKPCPNSAFFW----- 170
+ +KG+VESR R L +++ ++T G+ P+P + Y+ + NS ++
Sbjct: 385 STAYRKYKGFVESRLR-LLVRMLENTPGIKSVRPWPEEMPYVVDGEVRENSCCWYIGLDF 443
Query: 171 -GLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIY-------FSYVCRRHLP 222
LS G + C D + F I+ + +D Y +Y+ R LP
Sbjct: 444 PKLSSMAAGQTVTC---DLRNCTSGFFDRINEW----SEKDTYHGQFEMDIAYISRPKLP 496
Query: 223 SFVFPD 228
+ D
Sbjct: 497 EHLVKD 502
>gi|392579948|gb|EIW73075.1| hypothetical protein TREMEDRAFT_67196 [Tremella mesenterica DSM
1558]
Length = 648
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 90/153 (58%), Gaps = 4/153 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG--ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
+V++FF ++ QW WPNPV++ IE G + SVW+P+ + +D +HRMPIITPAY M +
Sbjct: 254 IVAKFFPIFYQWGWPNPVLLKKIESGPPNMHHSVWNPKLDRRDMAHRMPIITPAYPSMCT 313
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELG-KAEWSALFEHYPFFEAYENYLQVDIVAADA 118
++ ++ T+ V+ + ++ + I + W LFE FF Y++Y+QV A+ +
Sbjct: 314 THNITASTMSVIKNEMLRAMQVTDRIMSNPGSSWMELFEQIDFFSMYKSYVQVIASASTS 373
Query: 119 DDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHP 151
+ + W G VESR R L +E N ++ HP
Sbjct: 374 EGIKDWGGTVESRIRTLVQDLENSDN-IITAHP 405
>gi|403220429|dbj|BAM38562.1| polyadenylate polymerase [Theileria orientalis strain Shintoku]
Length = 511
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 118/235 (50%), Gaps = 15/235 (6%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM-----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ +FF+V++ W W PV +C I+ G + F VWDP + +DR H MPIITPA+
Sbjct: 262 LIEKFFKVFSMWNWIYPVTLCKIKRESGVPGLMSFKVWDPTNSLQDRQHLMPIITPAFPS 321
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAE-WSALFEHYPFFEAYENYLQVDIVA 115
MNS++ V+ T +V+TE+ ++ + L + W + E F Y+++L +++
Sbjct: 322 MNSTHNVTATTKRVVTEELSRAAQLLKTPNLTNTQLWEMVLEEEDVFSKYKHFLVIEVYG 381
Query: 116 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPN--KYIDPSKPCPNSAFFWGLS 173
+ W+GW+ SR R L K+E T Q P P K+ D +SAFF
Sbjct: 382 SSEHAHNKWEGWIGSRMRFLIKKLE--TLEYTQIRPLPGFFKFEDRDWEYASSAFF--AF 437
Query: 174 RKEVGTSKECQQFDFQGTVKNFRRGIDNY---RVRREGRDIYFSYVCRRHLPSFV 225
+ + Q FD + +++F+ I+ + ++ D+ Y+ + LP ++
Sbjct: 438 KHTAPVVEGYQSFDIRMPIQSFKEIINTWCDMETFKDQIDVNIRYLKSKQLPDYI 492
>gi|398390670|ref|XP_003848795.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
gi|339468671|gb|EGP83771.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
Length = 559
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 88/165 (53%), Gaps = 3/165 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
M+V +FF V + W+WP + + E G L WDP N D+ H MP+ITPAY CMNS+
Sbjct: 259 MIVQKFFFVISNWQWPRAITLQTREKGPLAEKEWDPTLNRWDKMHLMPVITPAYPCMNST 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ T V+ + + G+ I EEI GK +W LF FF EAY++Y+ V +
Sbjct: 319 MSIMPSTKAVLLTELKRGHDIMEEIYGGKKQWKDLFVKQKFFSEAYQHYICVITAGKTKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQ-DTNGLLQCHPYPNKYIDPSKPC 163
W G V+SR R+L IEQ D + + P+ NK ID C
Sbjct: 379 AQQAWSGLVQSRLRRLIQGIEQSDADSVELVQPF-NKGIDRVHEC 422
>gi|325191928|emb|CCA26398.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 664
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 111/240 (46%), Gaps = 14/240 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMG--ELGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
+L+ RFF V+++W WP PV + +G E W P+ N DR+H MPIITP Y +N
Sbjct: 396 VLLHRFFLVFSKWTWPTPVWIARPYLGNAEADGVQWCPQTNHHDRAHLMPIITPGYPSVN 455
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEEI--ELGKAEWSALFEHYPFFEAYENYLQVDIVAA 116
S+ V+ TL++M E+FQ G I EEI + W LF F Y+NYL + + A
Sbjct: 456 SAVNVNRATLRIMQEEFQRGRYIVEEITEKYAFGNWQNLFTPSEFLVRYDNYLVMRVQAL 515
Query: 117 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 176
+ +DL W ++ SR R+L +E + HPYP P N++ ++ L +
Sbjct: 516 NEEDLDQWSNYIASRLRKLVESLEVAI-PIRSVHPYPVLMPGTQDPGVNASGYYLLGFEV 574
Query: 177 VGTSKECQQFDF-----QGTVKNFRRGI----DNYRVRREGRDIYFSYVCRRHLPSFVFP 227
+ C+ TV R I D R+ G I Y LP V P
Sbjct: 575 ENRKRGCKSNTLCEEAKACTVSAMRYFIATEVDQCTERKPGMKIDLQYANWNALPLCVLP 634
>gi|298710751|emb|CBJ32172.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 533
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 81/147 (55%), Gaps = 6/147 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ RFF++ W WPN + + ELG VW+ R N H MPIITPAY MNSS
Sbjct: 249 LLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARAN---SWHCMPIITPAYPVMNSSA 305
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSA---LFEHYPFFEAYENYLQVDIVAADA 118
VS TL VMT +F G + I K SA LFE FF Y +YL VD++A+
Sbjct: 306 NVSRFTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNHYLAVDMMASSE 365
Query: 119 DDLLTWKGWVESRFRQLTLKIEQDTNG 145
D+ W GWVESR R++T + ++ G
Sbjct: 366 DEHRAWVGWVESRLRKVTNRFRMESVG 392
>gi|315043474|ref|XP_003171113.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
gi|311344902|gb|EFR04105.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
Length = 583
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ QW WP PV++ IE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEA-YENYLQVDIVAADAD 119
+ VS+ T V+ + + G + ++I +G+ WS LF + FF A Y+ YL ++ + +
Sbjct: 319 HNVSMSTKSVILRELRRGGDMVDKIFVGQRRWSDLFARHSFFSADYKYYLSINSTSTTKE 378
Query: 120 DLLTWKGWVESRFRQL 135
W G VES+ R L
Sbjct: 379 AQAIWSGLVESKLRHL 394
>gi|323452142|gb|EGB08017.1| hypothetical protein AURANDRAFT_27130 [Aureococcus anophagefferens]
Length = 449
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 88/178 (49%), Gaps = 29/178 (16%)
Query: 2 LVSRFFRVYTQWRWPNPVMMC-----PIEMGELG----FSVWDPRKNPKDRSHRMPIITP 52
+V RFFR++ W WPNPV++ P G+ ++ W+PR NP+DR+H PI+TP
Sbjct: 274 VVGRFFRIFDGWDWPNPVLIAAPGAPPSSAGDESVASRYAAWNPRLNPRDRAHLAPIVTP 333
Query: 53 AYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSA------------------ 94
A+ MNSSY V L+ + ++ G +E A W A
Sbjct: 334 AHPTMNSSYNVGAPQLRAIKDELSKGLETTRRVEKLAAHWRADESPTGDRAADLRDAWRR 393
Query: 95 LFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
LF FF + +Y+QVD+ AAD L W W ESR R L + + DT G ++ P+
Sbjct: 394 LFAPSDFFARHRHYVQVDVSAADDAGLRKWNAWCESRLRNLVVAL--DTPGYVRARPH 449
>gi|159489342|ref|XP_001702656.1| poly(a) polymerase [Chlamydomonas reinhardtii]
gi|158280678|gb|EDP06435.1| poly(a) polymerase [Chlamydomonas reinhardtii]
Length = 407
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 77/143 (53%), Gaps = 4/143 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++ +FF + W WP + + E LG VWDPR +D MP+ITPAY MNS Y
Sbjct: 259 VLLKFFILLKAWPWPRAIHLRIPEEHSLGLPVWDPRPGTRDSLALMPVITPAYPAMNSLY 318
Query: 62 KVSLGTLQVMTEQFQCGNRICEEI---ELGK-AEWSALFEHYPFFEAYENYLQVDIVAAD 117
V TL+VMTE+F +C GK EWS LF PFF + Y+Q+++ A
Sbjct: 319 NVQRSTLEVMTEEFAAAADVCTSFLHCPPGKPIEWSRLFTPVPFFTQHSFYIQLEVSADS 378
Query: 118 ADDLLTWKGWVESRFRQLTLKIE 140
DL+ W GWV SR R+L +E
Sbjct: 379 EGDLVLWDGWVSSRIRRLVRNLE 401
>gi|149237693|ref|XP_001524723.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
gi|146451320|gb|EDK45576.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
Length = 587
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 88/154 (57%), Gaps = 6/154 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF++Y+QW WP PV++ IE G L VW+P+ DR HRMP+ITPAY M +++
Sbjct: 256 IVEKFFQIYSQWSWPQPVLLKQIEDGPLQVRVWNPKLYSLDRQHRMPVITPAYPSMCATH 315
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADA--- 118
++ T +++ ++FQ G I I G W L + + FF Y+ YL V VAA
Sbjct: 316 NITASTQKIILDEFQRGTTIMHGILDGTKNWLDLLQRHDFFHRYKFYLCV--VAATKSTY 373
Query: 119 DDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
++ L + G ES+ R L K+E G+ HPY
Sbjct: 374 EEHLKYSGMFESKLRLLVQKLEM-VPGVELAHPY 406
>gi|443716054|gb|ELU07731.1| hypothetical protein CAPTEDRAFT_223399 [Capitella teleta]
Length = 657
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI-EMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
L+ +FF ++++W WP PV++ + + +L +VWDPR N DR H MPIITPAY NS+
Sbjct: 267 LLQKFFMLFSKWDWPAPVLLKQMSDENKLSHTVWDPRVNVSDRFHLMPIITPAYPQQNST 326
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y VS T Q+M ++F+ + + K EW +LF+ FF+ Y++Y+ + + D
Sbjct: 327 YNVSNSTRQIMMDEFKEALVVANNVYANKDEWGSLFQPSDFFQKYKHYIVLVARSDTEDH 386
Query: 121 LLTWKGWVESRFRQLTLKIEQD 142
L W G VES+ R L +E++
Sbjct: 387 QLEWVGLVESKIRILVGNLEKN 408
>gi|429961574|gb|ELA41119.1| hypothetical protein VICG_01818 [Vittaforma corneae ATCC 50505]
Length = 501
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 8/188 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF Y+ W+WP PV +C I VWDP+ P D+ H+MP+ITP Y +NS++
Sbjct: 251 IVCKFFETYSSWKWPTPVQLCSIVDHNYNLKVWDPKVYPADKYHKMPVITPVYPSINSTH 310
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V+ T ++ + GN E+ KA +S LFE FF+ ++ +++V I + D
Sbjct: 311 NVTQSTFILICSELARGN----ELMRSKAPFSKLFEVSGFFKKHKMFIEVRINSEDLQAF 366
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS---RKEVG 178
W+G+++S+ R L K+E N L P+P + S N+ G + K G
Sbjct: 367 NIWEGYIQSKIRILCTKLENLENISLAA-PFPKAFTGRSCKASNTDNIGGAASTGSKSSG 425
Query: 179 TSKECQQF 186
S + +++
Sbjct: 426 ISNKIEEY 433
>gi|154316305|ref|XP_001557474.1| hypothetical protein BC1G_03738 [Botryotinia fuckeliana B05.10]
Length = 544
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 85/152 (55%), Gaps = 2/152 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++ +FFR+ +QW+WP PV++ I+ G+L VW+PR D H MPIITP+Y M +++
Sbjct: 261 VILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRVYKGDGYHLMPIITPSYPSMCATH 320
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADADD 120
++ T +++ + G I + I GKA W LF + FF + Y+ YL V + +
Sbjct: 321 NITKSTKEIICRELARGGNITDRIMTGKASWKDLFVKHTFFTKNYKYYLSVISASTTKEA 380
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
L W G VES+ R L +E + L HP+
Sbjct: 381 QLIWAGLVESKVRLLVANVENHESIAL-AHPF 411
>gi|347827997|emb|CCD43694.1| similar to Poly(A) polymerase [Botryotinia fuckeliana]
Length = 573
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 85/152 (55%), Gaps = 2/152 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++ +FFR+ +QW+WP PV++ I+ G+L VW+PR D H MPIITP+Y M +++
Sbjct: 261 VILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRVYKGDGYHLMPIITPSYPSMCATH 320
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADADD 120
++ T +++ + G I + I GKA W LF + FF + Y+ YL V + +
Sbjct: 321 NITKSTKEIICRELARGGNITDRIMTGKASWKDLFVKHTFFTKNYKYYLSVISASTTKEA 380
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
L W G VES+ R L +E + L HP+
Sbjct: 381 QLIWAGLVESKVRLLVANVENHESIAL-AHPF 411
>gi|37595378|gb|AAQ94575.1| polyA polymerase alpha [Danio rerio]
Length = 386
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 68/108 (62%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR P DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYL 109
VS T +M E+F+ G I +EI KA+WS LFE FF+ Y+ L
Sbjct: 327 NVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFFQKYKYVL 374
>gi|156037648|ref|XP_001586551.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980]
gi|154697946|gb|EDN97684.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 573
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 86/152 (56%), Gaps = 2/152 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++ +FFR+ +W+WP PV++ I+ G+L VW+PR D H MPIITP+Y M +++
Sbjct: 261 IILKFFRIMEKWQWPQPVLLQQIKNGKLNVRVWNPRVYKSDSFHLMPIITPSYPSMCATH 320
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADADD 120
V+ T +++ + G I + I +GKA W LF+ + FF + Y+ YL V + +
Sbjct: 321 NVTKSTKEIICRELARGGNIVDRIMMGKAPWKDLFQKHTFFTKNYKYYLSVISASTTKEA 380
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
L W G VES+ R L +E + L HP+
Sbjct: 381 QLIWAGLVESKVRLLVTNLETHESIAL-AHPF 411
>gi|50925416|gb|AAH79525.1| Papolb protein [Danio rerio]
Length = 435
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 68/108 (62%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR P DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYL 109
VS T +M E+F+ G I +EI KA+WS LFE FF+ Y+ L
Sbjct: 327 NVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFFQKYKYVL 374
>gi|38541302|gb|AAH62850.1| Papolb protein [Danio rerio]
Length = 436
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 68/108 (62%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR P DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYL 109
VS T +M E+F+ G I +EI KA+WS LFE FF+ Y+ L
Sbjct: 327 NVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFFQKYKYVL 374
>gi|159154998|gb|AAI54504.1| Papolb protein [Danio rerio]
Length = 436
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 68/108 (62%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR P DR H MPIITPAY NS+Y
Sbjct: 267 LVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPIITPAYPQQNSTY 326
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYL 109
VS T +M E+F+ G I +EI KA+WS LFE FF+ Y+ L
Sbjct: 327 NVSASTRAIMVEEFKRGLAITDEILQNKADWSKLFEAPNFFQKYKYVL 374
>gi|440634435|gb|ELR04354.1| hypothetical protein GMDG_06729 [Geomyces destructans 20631-21]
Length = 598
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 84/152 (55%), Gaps = 2/152 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FFR+ +W+WP PV++ I G L VW+PR D H MPIITPAY M +++
Sbjct: 261 VVLKFFRIMEKWQWPTPVLLTHIASGPLQVKVWNPRIYKHDSFHLMPIITPAYPSMCATH 320
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADADD 120
++ T +++ + + G I ++I GK +W LF + FF E Y+ YL V + +
Sbjct: 321 NITRSTKEIIQRELKRGGNITDQIMSGKLQWKDLFAKHTFFTEGYKYYLSVISASTTREA 380
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
W G VES+ R L L +E + + HP+
Sbjct: 381 QNIWGGLVESKIRLLVLSLEGH-DSIALAHPF 411
>gi|320586365|gb|EFW99044.1| pap-like poly(A) polymerase [Grosmannia clavigera kw1407]
Length = 596
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++VS+FF + +W WPNPV++ PIE G L VW+P+ D+ H MPIITPAY M ++
Sbjct: 260 VIVSKFFGIILRWPWPNPVLLKPIEDGPLPVRVWNPKVYRGDQFHIMPIITPAYPSMCAT 319
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEA-YENYLQVDIVAADAD 119
Y +S +L ++ + + + I + I G+ +W LF + FF + Y+ Y+ V + + D
Sbjct: 320 YNISQSSLSIIKRELERASEISQMIISGRQQWKDLFVKHTFFTSDYKYYISVISASTEKD 379
Query: 120 DLLTWKGWVESRFRQLTLKIEQ 141
TW G+VES+ R L +E+
Sbjct: 380 AQNTWSGFVESKVRVLVQGLER 401
>gi|221057822|ref|XP_002261419.1| putative poly(a) polymerase pap (poly(a) polymerase pap [Plasmodium
knowlesi strain H]
gi|194247424|emb|CAQ40824.1| putative poly(a) polymerase pap (poly(a) polymerase pap, putative
[Plasmodium knowlesi strain H]
Length = 637
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 100/209 (47%), Gaps = 42/209 (20%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM-----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ +FFRVY+ W W PV++ I G FSVWDP KN KD+ H MPIITPA+ C
Sbjct: 339 LICKFFRVYSIWNWKYPVLIQNINKYNNVDGLRNFSVWDPEKNIKDKLHVMPIITPAFPC 398
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAE------------------------- 91
MNS++ V+ T ++ ++F+ + I +E+
Sbjct: 399 MNSTHNVTYCTRSILIDEFKRAHYIINYMEMNPGANVTFVMNQANGVVTPVSAPSSSTTS 458
Query: 92 -----WSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGL 146
W+ + + F Y+++L + I+A +WKGW+ES+ R L K+E T
Sbjct: 459 SSSNIWTNILQPLDLFGTYKHFLHIQIMATSELIYNSWKGWIESKIRLLFKKLE--TINE 516
Query: 147 LQCHPYPNKYI---DPSKPCPNSAFFWGL 172
L+ PYP Y+ D C S+FF L
Sbjct: 517 LKIRPYPKFYVYQKDKFDYC--SSFFIAL 543
>gi|325180233|emb|CCA14636.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 677
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 86/158 (54%), Gaps = 7/158 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ RFF V W+WP + +C E +LG VW+ +R H MPI+TPAY MNSS+
Sbjct: 262 LLLRFFMVLANWKWPLAIQLCKTEDVKLGLEVWNANVG-NNRYHVMPILTPAYPSMNSSF 320
Query: 62 KVSLGTLQVMTEQFQCGNRICEEI-ELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
VS +L VM ++F+ +I +EI G EW LFE FF ++YL VD+ + +D
Sbjct: 321 NVSTHSLAVMKQEFERALKIVQEILNRGAVEWDPLFESSDFFAVQQHYLAVDVYTTNRED 380
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCH--PYPNKY 156
W + ESR R+L IE + CH +P ++
Sbjct: 381 EQAWCSFCESRIRKL---IESLAYIPMLCHLRAFPKRF 415
>gi|156101143|ref|XP_001616265.1| poly(A) polymerase PAP [Plasmodium vivax Sal-1]
gi|148805139|gb|EDL46538.1| poly(A) polymerase PAP, putative [Plasmodium vivax]
Length = 649
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 105/216 (48%), Gaps = 49/216 (22%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM-----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ +FFRVY+ W W PV++ I G FSVWDP KN KD+ H MPIITPA+ C
Sbjct: 342 LIGKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPEKNIKDKLHVMPIITPAFPC 401
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIE----------LGKAE--------------- 91
MNS++ V+ T ++ ++F+ + I +E + +A
Sbjct: 402 MNSTHNVTYCTRSILIDEFKRAHYIINYMEANPGANVTFVMNQANGIVTPVSAPTTSSST 461
Query: 92 ------------WSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKI 139
W+ + + F +Y+++L + I+A + +WKGW+ES+ R L K+
Sbjct: 462 TGSGSIPGSGSMWTNILQPLDLFASYKHFLHIQIMATNELIYNSWKGWIESKIRLLFKKL 521
Query: 140 EQDTNGLLQCHPYPNKYI---DPSKPCPNSAFFWGL 172
E T L+ PYP Y+ D C S+FF GL
Sbjct: 522 E--TINELKIRPYPKFYVYKKDKFYYC--SSFFIGL 553
>gi|389584571|dbj|GAB67303.1| poly(A) polymerase PAP [Plasmodium cynomolgi strain B]
Length = 628
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 94/191 (49%), Gaps = 37/191 (19%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM-----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ +FFRVY+ W W PV++ I G FSVWDP KN KD+ H MPIITPA+ C
Sbjct: 344 LICKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPEKNIKDKLHVMPIITPAFPC 403
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAE------------------------- 91
MNS++ V+ T ++ ++F+ + I +E+
Sbjct: 404 MNSTHNVTYCTRSILIDEFKRAHYIINYMEMNPGANVTFVMNQANGIVTPVSTPSSNSSS 463
Query: 92 -----WSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGL 146
W+ + + F Y+++L + I+A + +WKGW+ES+ R L K+E T
Sbjct: 464 SSSSIWTNILQPLDLFATYKHFLHIQIMATNELIYNSWKGWIESKIRLLFKKLE--TINE 521
Query: 147 LQCHPYPNKYI 157
L+ PYP Y+
Sbjct: 522 LRIRPYPKFYV 532
>gi|310798369|gb|EFQ33262.1| hypothetical protein GLRG_08406 [Glomerella graminicola M1.001]
Length = 631
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 89/157 (56%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF + +W WP PV++ +E G L VW+P+ D+ H MP+ITPAY M ++
Sbjct: 264 VIVNKFFHIMRRWPWPQPVLLKHVEGGPLQVRVWNPKLYKGDQFHLMPVITPAYPSMCAT 323
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
Y ++ + V+ ++ Q G I + I LG++ WS LF + FF + Y+ Y+ V + D +
Sbjct: 324 YNITRSAMTVIQQELQRGCDITDAIMLGRSPWSDLFVKHTFFTQGYKYYISVITSSTDKE 383
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G+VES+ R L +EQ + L H + Y
Sbjct: 384 AHKVWSGYVESKVRVLVQGLEQHQSIAL-AHAFNKGY 419
>gi|301087134|gb|ADK60784.1| nucleic acid binding protein [Arachis diogoi]
gi|301087263|gb|ADK60848.1| putative nucleic acid binding protein, partial [Arachis diogoi]
Length = 74
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/54 (88%), Positives = 51/54 (94%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAY 54
MLVSRFFRVYTQWRWPNPVM+CPIE ELGFSVWDPRKNP+DR+H MPIITPAY
Sbjct: 20 MLVSRFFRVYTQWRWPNPVMLCPIEENELGFSVWDPRKNPRDRTHHMPIITPAY 73
>gi|380471549|emb|CCF47226.1| hypothetical protein CH063_04087 [Colletotrichum higginsianum]
Length = 619
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 88/157 (56%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF + +W WP PV++ +E G L VW+P+ D+ H MP+ITPAY M ++
Sbjct: 264 VIVNKFFHIMRRWPWPQPVLLKQVEGGPLQVRVWNPKLYKGDQFHLMPVITPAYPSMCAT 323
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
Y ++ + V+ ++ Q G I + I LG+ WS LF + FF + Y+ Y+ V + D +
Sbjct: 324 YNITRSAMTVIQQELQRGCDITDAIMLGRNPWSDLFVKHTFFTQGYKYYISVITSSTDKE 383
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G+VES+ R L +EQ + L H + Y
Sbjct: 384 AHKVWSGYVESKVRVLVQGLEQHQSIAL-AHAFNKGY 419
>gi|425765475|gb|EKV04155.1| Poly(A) polymerase Pap [Penicillium digitatum Pd1]
gi|425778347|gb|EKV16478.1| Poly(A) polymerase Pap [Penicillium digitatum PHI26]
Length = 597
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 85/157 (54%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ IE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNKWNWPQPVLLKQIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ +S+ T V+ + Q G I ++I + + W LF + FF Y+ YL + + +
Sbjct: 319 HNISMSTKAVILRELQRGGDIVDKIFMKQLSWQDLFARHTFFTHDYKYYLSITASSKTKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ + HP+P +
Sbjct: 379 AESVWSGLVESKLRHLVGALDRKPI-VAVAHPFPKGF 414
>gi|396080920|gb|AFN82540.1| poly (A) polymerase type 1 [Encephalitozoon romaleae SJ-2008]
Length = 505
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 88/155 (56%), Gaps = 3/155 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF +++ W+WP PV++ P+ VWDP+ P D+ HRMP+ITPAY M +++
Sbjct: 257 IVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHRMPVITPAYPSMCATH 316
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T V+T +F + I +E K ++ +FE FF Y+ +++V ++ +
Sbjct: 317 NVSNSTQHVITMEFSRAHEILSNLE--KNDFRRIFELSDFFGRYKLFVEVLAMSTLEEGF 374
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W+G+VESR R L K E + +L P+P +
Sbjct: 375 TKWEGYVESRIRILASKFEA-VDDILYAIPFPKAF 408
>gi|302499084|ref|XP_003011538.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
gi|291175090|gb|EFE30898.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
Length = 700
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 21/176 (11%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKN-------PK------------ 41
++V +FFR+ QW WP PV++ IE G L VW+P+ PK
Sbjct: 266 VIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKVGSQLCFFIPKALTDFSFQIYHG 325
Query: 42 DRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPF 101
DR H MPIITPAY M +++ VS+ T V+ + + G + ++I +G+ WS LF + F
Sbjct: 326 DRFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHSF 385
Query: 102 FEA-YENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
F A Y+ YL ++ + + W G VES+ R L +++ ++ + HP+P +
Sbjct: 386 FSADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 440
>gi|378730028|gb|EHY56487.1| poly(A) polymerase [Exophiala dermatitidis NIH/UT8656]
Length = 611
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 84/145 (57%), Gaps = 6/145 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM---GEL--GFSVWDPRKNPKDRSHRMPIITPAYHC 56
+V +FF V + W WP PVM+ IE +L GF VW+P P DR + MPIITPA+
Sbjct: 264 IVDKFFFVISHWDWPTPVMLKDIEQLKNADLNKGFRVWNPAIYPGDRKNIMPIITPAFPS 323
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEA-YENYLQVDIVA 115
M ++Y +S +V+ + + G I +I GKA+WS LF+ + FF A ++ YL + +
Sbjct: 324 MCATYNISKSGKKVILNELKRGGEITNKIFAGKAKWSDLFKKHTFFTADHKYYLSITASS 383
Query: 116 ADADDLLTWKGWVESRFRQLTLKIE 140
+AD W G VES+ R +++E
Sbjct: 384 LNADSAKAWAGLVESKVRIFVMQLE 408
>gi|170040884|ref|XP_001848213.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167864495|gb|EDS27878.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 395
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYK 62
V +FF V+ +W+WP PV + + LGF VWD R N +DR H M IITPAY NS++
Sbjct: 244 VHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMSIITPAYPQQNSTFH 303
Query: 63 VSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLL 122
VS T +VM +F +I +EI LGKA W LFE FF Y ++ + + + + DD L
Sbjct: 304 VSSSTRKVMLNEFNSDMQITDEIMLGKAGWDKLFEAPSFFFKYRYFIVLLVTSNNTDDHL 363
Query: 123 TWKGWVESRFRQLTLKIEQ 141
ES+ R L +E+
Sbjct: 364 E-----ESKIRYLIQNLER 377
>gi|19073993|ref|NP_584599.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|19068635|emb|CAD25103.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|449329262|gb|AGE95535.1| poly (a) polymerase type 1 [Encephalitozoon cuniculi]
Length = 505
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 117/237 (49%), Gaps = 22/237 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF +++ W+WP PV++ P+ VWDP+ P D+ HRMP+ITPAY M +++
Sbjct: 257 IVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHRMPVITPAYPSMCATH 316
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T V+T +F ++I + E + ++ +FE FF Y +++V +++ +D
Sbjct: 317 NVSNSTQHVITMEFTRAHKILSDPE--RNDFRRIFELSDFFSRYRLFVEVLAMSSCEEDF 374
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY-------------IDPSKPCPNSAF 168
W+G++ES+ R L K E + +L P+P + ++ K C +AF
Sbjct: 375 PKWEGYLESKIRILASKFEA-VDDVLYAIPFPKAFRVAEESIEKIGPRMEGMKKC--TAF 431
Query: 169 FWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFV 225
F + V K + VK F + Y R G I + + R+ + F+
Sbjct: 432 FIAIDVIPVKGKKVI----VEQQVKEFIEFVREYEGRASGMRIEVNSLKRKDVQGFL 484
>gi|302665415|ref|XP_003024318.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
gi|291188368|gb|EFE43707.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
Length = 599
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 92/177 (51%), Gaps = 22/177 (12%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPK------------------- 41
++V +FFR+ QW WP PV++ IE G L VW+P+ +
Sbjct: 266 VIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKVGSQLCFFFIPRALADFSFQIYH 325
Query: 42 -DRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYP 100
DR H MPIITPAY M +++ VS+ T V+ + + G + ++I +G+ WS LF +
Sbjct: 326 GDRFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQRRWSDLFARHS 385
Query: 101 FFEA-YENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
FF A Y+ YL ++ + + W G VES+ R L +++ ++ + HP+P +
Sbjct: 386 FFSADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKSS-IEIAHPFPKGF 441
>gi|429852211|gb|ELA27357.1| poly polymerase [Colletotrichum gloeosporioides Nara gc5]
Length = 632
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF + +W WP PV++ +E G L VW+P+ D+ H MP+ITPAY M ++
Sbjct: 264 VIVNKFFHIMRRWPWPQPVLLKNVEGGPLQVRVWNPKVYKGDQFHLMPVITPAYPSMCAT 323
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
Y ++ + V+ ++ G I + I +GK WS LF + FF + Y+ Y+ V + D +
Sbjct: 324 YNITRSAMTVIQQELTRGCEITDNIMVGKNPWSDLFVKHTFFTQGYKYYISVITASTDKE 383
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G+VES+ R L +EQ + L H + Y
Sbjct: 384 AHKIWSGYVESKVRVLVQGLEQHQSIAL-AHAFNKGY 419
>gi|255930343|ref|XP_002556731.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581344|emb|CAP79117.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 590
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 85/157 (54%), Gaps = 2/157 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V +FFR+ +W WP PV++ IE G L VW+P+ DR H MPIITPAY M ++
Sbjct: 259 VIVGKFFRIMNKWNWPQPVLLKQIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ +S+ T V+ + Q G + ++I + + W LF + FF Y+ YL + + +
Sbjct: 319 HNISMSTKAVILRELQRGGDMVDKIFMKQLSWHDLFARHTFFTHDYKYYLSITASSKTKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G VES+ R L +++ + HP+P +
Sbjct: 379 AESVWSGLVESKLRHLVGALDRKPI-IAVAHPFPKGF 414
>gi|86171578|ref|XP_966239.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
gi|46361205|emb|CAG25069.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
Length = 631
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 99/203 (48%), Gaps = 36/203 (17%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM----GELGFSVWDPRKNPKDRSHRMPIITPAYHCM 57
L+ +FF+VY+ W W PV++ I+ G F VWDP KN KD+ H MPIITPA+ CM
Sbjct: 331 LICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMPIITPAFPCM 390
Query: 58 NSSYKVSLGTLQVMTEQFQCG----------NRICEEIELGKA---------------EW 92
NS++ V+ T ++ E+F+ N I I + K W
Sbjct: 391 NSTHNVTYCTRNILIEEFKRAHSIIQYMEDENNIKSSIRMNKLWPNNNVNNINNSSNNVW 450
Query: 93 SALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPY 152
+ E F Y+++L + I+ + +WKGW+ES+ R L K+E T L+ P+
Sbjct: 451 MTILEPLDLFSTYKHFLHIQIMGINEFIYNSWKGWIESKIRLLFKKLE--TINELKIRPF 508
Query: 153 PNKYI---DPSKPCPNSAFFWGL 172
P Y + S C S+FF L
Sbjct: 509 PKFYFYKKEKSYYC--SSFFIAL 529
>gi|336268304|ref|XP_003348917.1| hypothetical protein SMAC_01938 [Sordaria macrospora k-hell]
gi|380094176|emb|CCC08393.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 632
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 84/143 (58%), Gaps = 3/143 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGE--LGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
++V +FF + W WP PV++ IE + +VW+P+ P DR+H+MPIITP+Y M
Sbjct: 262 VVVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDRNHKMPIITPSYPSMC 321
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAAD 117
+++ V ++ V+ ++ + G +I EEI LGK W LFE + FF ++ YL V
Sbjct: 322 ATHNVGRSSMAVIQQELERGVQIAEEIMLGKRPWKDLFEKHTFFTNGFKFYLTVISSGRT 381
Query: 118 ADDLLTWKGWVESRFRQLTLKIE 140
+ TW G+VESR R L K+E
Sbjct: 382 KEAQNTWSGFVESRVRVLVQKLE 404
>gi|401825414|ref|XP_003886802.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
gi|392997958|gb|AFM97821.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
Length = 506
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 87/155 (56%), Gaps = 3/155 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF +++ W+WP PV++ P+ VWDP+ P D+ HRMP+ITPAY M +++
Sbjct: 257 IVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHRMPVITPAYPSMCATH 316
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T V+T +F + I E K ++ +FE FF Y+ +++V ++ +
Sbjct: 317 NVSNSTQHVITMEFSRAHEILSNPE--KNDFRRIFELSDFFSRYKLFVEVLAMSTSEEGF 374
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W+G+VES+ R L K E + +L P+P +
Sbjct: 375 AKWEGYVESKIRILASKFEA-VDDILYAIPFPKAF 408
>gi|164423119|ref|XP_959011.2| Poly(A) polymerase [Neurospora crassa OR74A]
gi|157069956|gb|EAA29775.2| Poly(A) polymerase [Neurospora crassa OR74A]
Length = 632
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 84/143 (58%), Gaps = 3/143 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGE--LGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
++V +FF + W WP PV++ IE + +VW+P+ P DR+H+MPIITP+Y M
Sbjct: 262 VIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDRNHKMPIITPSYPSMC 321
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAAD 117
+++ V ++ V+ ++ + G +I EEI LGK W LFE + FF ++ YL V
Sbjct: 322 ATHNVGRSSMAVIQQELERGVQISEEIMLGKRPWKDLFEKHTFFTNGFKFYLTVISSGRT 381
Query: 118 ADDLLTWKGWVESRFRQLTLKIE 140
+ TW G+VESR R L K+E
Sbjct: 382 KEAQNTWSGFVESRVRVLVQKLE 404
>gi|336470057|gb|EGO58219.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2508]
gi|350290251|gb|EGZ71465.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2509]
Length = 632
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 84/143 (58%), Gaps = 3/143 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGE--LGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
++V +FF + W WP PV++ IE + +VW+P+ P DR+H+MPIITP+Y M
Sbjct: 262 VIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDRNHKMPIITPSYPSMC 321
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAAD 117
+++ V ++ V+ ++ + G +I EEI LGK W LFE + FF ++ YL V
Sbjct: 322 ATHNVGRSSMAVIQQELERGVQISEEIMLGKRPWKDLFEKHTFFTNGFKFYLTVISSGRT 381
Query: 118 ADDLLTWKGWVESRFRQLTLKIE 140
+ TW G+VESR R L K+E
Sbjct: 382 KEAQNTWSGFVESRVRVLVQKLE 404
>gi|302846120|ref|XP_002954597.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
gi|300260016|gb|EFJ44238.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
Length = 410
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 4/143 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++ +FF + W WP + + E +G VWDPR +D MP+ITPAY MNS Y
Sbjct: 259 VLLKFFILLKAWPWPRAIHLRVPEDHSMGLPVWDPRPGTRDSLALMPVITPAYPAMNSLY 318
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKA----EWSALFEHYPFFEAYENYLQVDIVAAD 117
V TL+VMT +F +C + +W LF PFF + Y+Q+++ A
Sbjct: 319 NVQRSTLEVMTAEFAAAAEVCTSFLRCRGGQPLDWDRLFMPVPFFTQHTFYIQIEVSADS 378
Query: 118 ADDLLTWKGWVESRFRQLTLKIE 140
DL+ W GWV SR R+L +E
Sbjct: 379 EQDLVLWDGWVSSRIRRLVRNLE 401
>gi|211909028|gb|ACJ12807.1| poly(A) polymerase alpha [Bubalus bubalis]
Length = 108
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 67/108 (62%)
Query: 33 VWDPRKNPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEW 92
VWDPR NP DR H MPIITPAY NS+Y VS+ T VM E+F+ G I +EI L KAEW
Sbjct: 1 VWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEW 60
Query: 93 SALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIE 140
S LFE FF+ Y++Y+ + A L W G VES+ R L +E
Sbjct: 61 SKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLE 108
>gi|453087599|gb|EMF15640.1| Poly(A) polymerase [Mycosphaerella populorum SO2202]
Length = 607
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 90/165 (54%), Gaps = 4/165 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG-ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+V++FF V W+WP+P+ + E G L WDP+KN +D+ H MP+ITPAY MN++
Sbjct: 260 IVAKFFWVVKNWQWPSPIYLQAREKGPSLNQQEWDPQKNFRDKRHLMPVITPAYPVMNAT 319
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ ++ T +V+ + G+ I +I GK +W L + FF AY++Y+ + + D
Sbjct: 320 HTITRSTKEVLIRELNRGHEIMADIYSGKKQWRDLLIKHEFFTSAYQHYIVIVTASKTKD 379
Query: 120 DLLTWKGWVESRFR-QLTLKIEQDTNGLLQCHPYPNKYIDPSKPC 163
D W G V SR R +L IE + + P+ NK I+ C
Sbjct: 380 DQQAWAGLVTSRLRFKLVEGIEDSADKVNLVQPF-NKGIERHHKC 423
>gi|68070217|ref|XP_677020.1| poly(A) polymerase PAP [Plasmodium berghei strain ANKA]
gi|56496967|emb|CAH94131.1| poly(A) polymerase PAP, putative [Plasmodium berghei]
Length = 626
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 53/220 (24%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM----GELGFSVWDPRKNPKDRSHRMPIITPAYHCM 57
L+ +FFRVY+ W W PV++ I+ G F++WDP KN KD+ H MPIITPA+ CM
Sbjct: 330 LICKFFRVYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEKNVKDKLHIMPIITPAFPCM 389
Query: 58 NSSYKVSLGTLQVMTEQFQCGNRICEEIEL----------------------------GK 89
NS++ V+ T ++ E+F+ + I ++L GK
Sbjct: 390 NSTHNVTYCTRSILIEEFKRAHSIINYMDLNPDADIGQVMEHVNNLMSYGNAININNVGK 449
Query: 90 AE--------------WSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQL 135
+ WS + E + F+ Y+++L + I+ + WKGW+ES+ R L
Sbjct: 450 SGDNENVNIHNNSSSIWSCIIEPFDLFKTYKHFLHIQIMGTNELIYNLWKGWIESKIRLL 509
Query: 136 TLKIEQDTNGLLQCHPYPNKYI---DPSKPCPNSAFFWGL 172
K+E T L+ P+P Y D C S+FF L
Sbjct: 510 FKKLE--TINELKIRPFPKFYTYKKDKFYYC--SSFFIAL 545
>gi|452845518|gb|EME47451.1| hypothetical protein DOTSEDRAFT_69399 [Dothistroma septosporum
NZE10]
Length = 610
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 93/167 (55%), Gaps = 5/167 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMG-ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
++V++FF V +WRWP+PV +C E +LG V +NP +++ +MPIITP + CMN+
Sbjct: 258 VIVNKFFMVMGKWRWPDPVTLCKREPAPDLGHYVAQWPENPWEKADKMPIITPVFPCMNA 317
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADA 118
+ ++ L+V+ +FQ +I +I GK EW ALF FF E Y++YL + +
Sbjct: 318 TGGLTASNLEVILREFQRALKITNDIHNGKQEWQALFARQTFFTEDYKHYLCLVTGSRTK 377
Query: 119 DDLLTWKGWVESRFRQLTLKIE--QDTNGLLQCHPYPNKYIDPSKPC 163
+ W G+V SR R+L IE Q + HP+ NK + C
Sbjct: 378 EAQQAWSGFVSSRLRKLVSSIESPQSKTAVKLIHPF-NKGFEAMHEC 423
>gi|339236667|ref|XP_003379888.1| poly(A) polymerase gamma [Trichinella spiralis]
gi|316977404|gb|EFV60513.1| poly(A) polymerase gamma [Trichinella spiralis]
Length = 923
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 110/239 (46%), Gaps = 19/239 (7%)
Query: 1 MLVSRFFRVY--------TQWRWPNPVMM----CPIEMGELGFS--VWDPRKNPKDRSHR 46
MLV+R ++Y WP PV++ G +GF +WDPR DR H
Sbjct: 441 MLVARTCQLYPRAAPNVLVNKEWPKPVLLKNSITSQNHGYIGFQELIWDPRVKQSDRYHL 500
Query: 47 MPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYE 106
MPIITPA+ NS++ VS T ++ + G + E+ W LFE FF Y+
Sbjct: 501 MPIITPAFPQQNSTFNVSSTTRSILQKFLHEGFLVSTEVICKGLSWPKLFEPSNFFVKYK 560
Query: 107 NYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNS 166
+Y+ + AA DL+TW G VES+ R L + E +T G+L H P ++ +
Sbjct: 561 HYIVISCFAATRADLITWSGLVESKMRYLIGQFEHNT-GVLLAHVNPEQFSPLEEHGDGV 619
Query: 167 AFFW--GL--SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
FW GL +++ +G D Q V + R N V R+G + Y RR L
Sbjct: 620 ESFWVVGLEMNKEGIGAKNIDLTSDIQSFVDSIMRQALNSDVWRQGMKVEAKYRRRREL 678
>gi|313243939|emb|CBY14824.1| unnamed protein product [Oikopleura dioica]
Length = 630
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 121/252 (48%), Gaps = 35/252 (13%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFS--VWDPRKNPKDRSHRMPIITPAYHCMNS 59
L+ +FF ++++W WP PV + E GF+ VWDPR NP DRSH MPIITPAY NS
Sbjct: 251 LLEKFFLLFSKWDWPKPVFLKVPEDAPPGFTHPVWDPRFNPLDRSHLMPIITPAYPHQNS 310
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEI--------ELGKAEWSALFEHYPFFEAYENYLQV 111
++ VS TL VM ++ + ++I E W+ LF FF Y++++ +
Sbjct: 311 TFNVSRSTLSVMKQEIKDAYETTKQILQKTPNPDEPNTRLWADLFTRTDFFNKYKHFIVL 370
Query: 112 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--- 168
A + W G VES R+L +E++ L+ + +DP++ + +
Sbjct: 371 SATADQQEQYQKWIGLVESNIRKLVNDLERNEYILIAHVNVDSIELDPAEEGQSPRYVCR 430
Query: 169 -FWGLS------RKEVGTSKECQQFD---FQGTVKNFRRGIDNYR--VRREGRDIYFSYV 216
F GLS + + + + Q+F Q + + +NY +R E R YV
Sbjct: 431 WFLGLSFHRCEVKPNINLTSDIQRFTDLLHQAAISH-----NNYTPDMRVEAR-----YV 480
Query: 217 CRRHLPSFVFPD 228
R +L F+ P+
Sbjct: 481 KRHNLVKFLTPE 492
>gi|170059284|ref|XP_001865296.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167878124|gb|EDS41507.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 328
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 79/140 (56%), Gaps = 11/140 (7%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAY-HCMNSSY 61
V +FF V+++W+W +PV + + LGF VWDPR N + R H MPIITPAY H
Sbjct: 181 VHKFFLVFSRWKWSHPVFLKRPDTVNLGFQVWDPRVNVQGRFHLMPIITPAYPH------ 234
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
T +VM +F G +I +EI LGKA W LFE FF Y + + + + + DDL
Sbjct: 235 ----STRKVMLNEFSRGMQITDEIMLGKAGWDKLFEAPSFFFKYRYIIVLLVTSNNTDDL 290
Query: 122 LTWKGWVESRFRQLTLKIEQ 141
L W VES+ R L +E+
Sbjct: 291 LEWCELVESKIRYLIQNLER 310
>gi|313216525|emb|CBY37820.1| unnamed protein product [Oikopleura dioica]
Length = 643
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 121/252 (48%), Gaps = 35/252 (13%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFS--VWDPRKNPKDRSHRMPIITPAYHCMNS 59
L+ +FF ++++W WP PV + E GF+ VWDPR NP DRSH MPIITPAY NS
Sbjct: 264 LLEKFFLLFSKWDWPKPVFLKVPEDAPPGFTHPVWDPRFNPLDRSHLMPIITPAYPHQNS 323
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEI--------ELGKAEWSALFEHYPFFEAYENYLQV 111
++ VS TL VM ++ + ++I E W+ LF FF Y++++ +
Sbjct: 324 TFNVSRSTLSVMKQEIKDAYETTKQILQKTPNPDEPNTRLWADLFTRTDFFNKYKHFIVL 383
Query: 112 DIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--- 168
A + W G VES R+L +E++ L+ + +DP++ + +
Sbjct: 384 SATADQQEQYQKWIGLVESNIRKLVNDLERNEYILIAHVNVDSIELDPAEEGQSPRYVCR 443
Query: 169 -FWGLS------RKEVGTSKECQQFD---FQGTVKNFRRGIDNYR--VRREGRDIYFSYV 216
F GLS + + + + Q+F Q + + +NY +R E R YV
Sbjct: 444 WFLGLSFHRCEVKPNINLTSDIQRFTDLLHQAAISH-----NNYTPDMRVEAR-----YV 493
Query: 217 CRRHLPSFVFPD 228
R +L F+ P+
Sbjct: 494 KRHNLVKFLTPE 505
>gi|171686334|ref|XP_001908108.1| hypothetical protein [Podospora anserina S mat+]
gi|170943128|emb|CAP68781.1| unnamed protein product [Podospora anserina S mat+]
Length = 661
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 93/168 (55%), Gaps = 5/168 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIE--MGELGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
++V++FF + +W WP PV++ IE + VW+P+ DR+HRMPIITPAY M
Sbjct: 258 VVVNKFFHIMLKWPWPLPVLLKDIEYNISVTRAPVWNPKLYSSDRNHRMPIITPAYPAMC 317
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEA-YENYLQVDIVAAD 117
+++ ++ + V+ ++ + G ++ EEI G+A W ALF + FF + + YL V +
Sbjct: 318 ATHNINRSSKVVIMQELEKGVQVTEEIMTGRAPWKALFTKHTFFTSDFRYYLTVISSSRT 377
Query: 118 ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 165
D W G++ESR R L KIE ++ P+ NK D C N
Sbjct: 378 KDAQNVWSGFIESRVRVLVNKIENHA-AIVLARPF-NKGYDRQHRCQN 423
>gi|269859597|ref|XP_002649523.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
gi|220067074|gb|EED44542.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
Length = 473
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 9/194 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V ++F Y+ W WP P+++ PI VWD +K P DR H+MPIITPAY M S++
Sbjct: 254 IVCKYFEYYSNWTWPEPILLKPIVDHHYNLKVWDNQKYPADRYHKMPIITPAYPSMCSTH 313
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V T ++ +F+ I + ++ +F++ FF Y+ Y+ + V AD + +
Sbjct: 314 NVFQSTFDLICREFRRSTEIINN-SINSTDFLQIFDNTDFFRKYKLYINIK-VKADKESI 371
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTSK 181
+W G+VES+ R L K E ++ P+P +I + C FF G+ + G+
Sbjct: 372 KSWSGFVESKVRILCSKFEA-VESIVAAIPFPKPFI-KDETC---NFFIGIEILKTGSQN 426
Query: 182 ECQQFDFQGTVKNF 195
+ D G +K F
Sbjct: 427 KKIYVD--GQIKEF 438
>gi|348688850|gb|EGZ28664.1| hypothetical protein PHYSODRAFT_474162 [Phytophthora sojae]
Length = 694
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 117/251 (46%), Gaps = 31/251 (12%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ RFF V W+WP + +C LG VW+ +R MPI+TPAY MNSS+
Sbjct: 262 LLLRFFMVLNNWKWPLAIQLCKTHDANLGLEVWNANAG-HNRYQVMPILTPAYPSMNSSF 320
Query: 62 KVSLGTLQVMTEQFQCGNRICEEI-ELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
VS +L VM E+F+ G I +++ G +EW LFE FF +++YL V++ ++
Sbjct: 321 NVSTHSLTVMKEEFKRGLTIVQDVLSKGGSEWGPLFEPSDFFAVHQHYLAVEVYTEKQEE 380
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYI--------DPSKPCPNSA----- 167
W G+ ESR R+L + + L + Y K+ P+ PN A
Sbjct: 381 EAAWCGFCESRMRKLVESLAYNP-ALCRLRAYTKKFPLSFVTGGEAPAGEQPNGAALAQP 439
Query: 168 ------FFWG--LSRKEVGTSKECQQFDFQGTVKNFRRGIDNYR--VRREGRDIYFSYVC 217
F+ G + R+++ ++ +V+ F+ D YR R D+ + V
Sbjct: 440 SKFGVCFYVGFDIDRRQL----RSREVSIDNSVEYFKNN-DLYRWNKRTPTMDVRVTPVV 494
Query: 218 RRHLPSFVFPD 228
+ LP VF D
Sbjct: 495 WKALPESVFED 505
>gi|403337557|gb|EJY68000.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 575
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 137/269 (50%), Gaps = 36/269 (13%)
Query: 2 LVSRFFRVYTQWRW--PNPVMMCPI--EMGELGFSVWDPRKNPKDRSHRMPIITPAYHCM 57
L++ FF+ YTQW W NP+++ I + + F++ + ++ MPIITPA+ M
Sbjct: 283 LLNYFFKAYTQWEWNYQNPILLTEIKNDRNSVNFTIEADLFYEEKQTDLMPIITPAFPSM 342
Query: 58 NSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAE----------WSALFEHYPFFEAYEN 107
N+++ VS T + M +F+ G +I E + L + E W LF+ + FF++Y +
Sbjct: 343 NATFNVSHSTKRAMLIEFEKGLKITEAL-LARNEDGSKLHQEMNWRRLFKKFNFFKSYVH 401
Query: 108 YLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDT---NGLLQCHPYPNKY-IDPSKPC 163
++Q+ I++ A+D W G++ES+ R+L ++E+ G ++ P+P Y ++ +
Sbjct: 402 FIQIQILSKSAEDHKKWTGFIESKIRKLLQQLEKLNELKGGCMEFRPWPKSYHLENNLDF 461
Query: 164 P-NSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNY---------RVRREGRDIYF 213
P + +++G+ K+ S + D T+K F + + + + + DI
Sbjct: 462 PMDDTYYFGIRIKK-NESDAQMRIDLTDTIKIFYKKLREWISVDHKLMQMIVDKLVDIKI 520
Query: 214 SYVCRRHLPSFVFPDGYKWHRPSRHFNEQ 242
+Y+ R LP + P G +++ NEQ
Sbjct: 521 NYIRRETLPDVIRPRG------AQNLNEQ 543
>gi|348669628|gb|EGZ09450.1| hypothetical protein PHYSODRAFT_304981 [Phytophthora sojae]
Length = 695
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 88/158 (55%), Gaps = 7/158 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMC-PIEMGELGFSV-WDPRKNPKDRSHRMPIITPAYHCMNS 59
LV RFF V WRWP P+++ P G++ V WDP N DR+H MPIITP + +N+
Sbjct: 410 LVHRFFSVLASWRWPTPILVAHPSNGGKVDNGVQWDPAHNIHDRAHLMPIITPGFPAVNT 469
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGK----AEWSALFEHYPFFEAYENYLQVDIVA 115
+ V+L TL+V+ E+F G RI +++ + W+ LF Y++++ +++ A
Sbjct: 470 AVNVNLSTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYDHHIAIELRA 529
Query: 116 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYP 153
+ + L W +V SR R+L ++ Q T + HP P
Sbjct: 530 PNEEALAEWSSFVASRTRKL-VETLQHTPSVATLHPLP 566
>gi|83285836|ref|XP_729897.1| poly(A) polymerase III [Plasmodium yoelii yoelii 17XNL]
gi|23489018|gb|EAA21462.1| poly(A) polymerase III [Plasmodium yoelii yoelii]
Length = 613
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 104/220 (47%), Gaps = 53/220 (24%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEM----GELGFSVWDPRKNPKDRSHRMPIITPAYHCM 57
L+ +FFRVY+ W W PV++ I+ G F++WDP KN KD+ H MPIITPA+ CM
Sbjct: 330 LICKFFRVYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEKNVKDKLHIMPIITPAFPCM 389
Query: 58 NSSYKVSLGTLQVMTEQFQCGNRICEEIE----------------------------LGK 89
NS++ V+ T ++ E+F+ + I ++ +GK
Sbjct: 390 NSTHNVTYCTRSILIEEFKRAHSIINYMDSNPDADISQVMEHVNNLMSHGNAININNVGK 449
Query: 90 AE--------------WSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQL 135
+ WS + E + F+ Y+++L + I+ + WKGW+ES+ R L
Sbjct: 450 SGDNENVNIHNNNSSIWSCIIEPFDLFKTYKHFLHIQIMGTNELIYNLWKGWIESKIRLL 509
Query: 136 TLKIEQDTNGLLQCHPYPNKYI---DPSKPCPNSAFFWGL 172
K+E T L+ P+P Y D C S+FF L
Sbjct: 510 FKKLE--TINELKIRPFPKFYTYKKDKFYYC--SSFFIAL 545
>gi|300120198|emb|CBK19752.2| unnamed protein product [Blastocystis hominis]
Length = 359
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 17/213 (7%)
Query: 7 FRVYTQWRWPNPVMMCPIEMG-ELGFS--VWDPRKNPKDRSHRMPIITPAYHCMNSSYKV 63
FR++ +W W PV++ +++ ELG VW+P++N + ++ PI+TP Y NS+Y V
Sbjct: 151 FRIFAEWDWQKPVLVRDVQLNPELGHDKDVWNPKENERCQNDLFPILTPCYPSQNSTYNV 210
Query: 64 SLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLLT 123
T VM +F+ + I G+ W+ LF+ +PFF +Y+ Y+Q+++ A ++
Sbjct: 211 MASTRDVMVAEFKRARDVTLSILKGETTWATLFKEFPFFTSYKYYIQIEVSAKTSEVFNN 270
Query: 124 WKGWVESRFRQLTLKIEQDTNGLLQCHPYP--------NKYIDPSKPCPNSAFFWGLSRK 175
W G+VES+ R+ T IE + + ++ +P + Y+ P P F+ +
Sbjct: 271 WYGFVESQIRRYTRMIEGNKSIVIHVYPTSFDVVRERGSSYVQPDSPLCKQ-FYIAFTPL 329
Query: 176 EVGTSKECQQFDFQGTVKNFRRGIDNYRVRREG 208
E K D + F+ + RV R G
Sbjct: 330 EAAKGKP---LDLSLATRQFKNHLQ--RVGRRG 357
>gi|395823522|ref|XP_003785035.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Otolemur garnettii]
Length = 735
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 105/228 (46%), Gaps = 11/228 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV FF V+++W PNPV++ E L VWD R NP DR PIITPAY NS+Y
Sbjct: 269 LVHXFFLVFSKWEXPNPVLVKQPEKCNLNLPVWDSRVNPSDRYQFAPIITPAYPQQNSTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
S+ T V+ E+F+ I + + L K E S LFE FF+ Y++Y+ + A
Sbjct: 329 SASISTQMVVVEEFKXSLSITDXL-LSKVEXSKLFEAPIFFQKYKDYIVLLAGAPTEKQR 387
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLL-----QCHPYPNKYIDPSKPCPNSAFFWGLSRKE 176
L W G VES+ L +E++ L Q P P + D + C + + GL K+
Sbjct: 388 LEWVGLVESKIXILIGSLEKNEFITLAHVNPQAFPAPKENPDKKEFC--TVWVIGLVFKK 445
Query: 177 VGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
K D Q R N ++ I ++V R+ L
Sbjct: 446 TENYKNLSVNLXHDIQAFTDTVYRQARNSKMFEVDMRIAATHVKRKQL 493
>gi|196011858|ref|XP_002115792.1| hypothetical protein TRIADDRAFT_30173 [Trichoplax adhaerens]
gi|190581568|gb|EDV21644.1| hypothetical protein TRIADDRAFT_30173, partial [Trichoplax
adhaerens]
Length = 405
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 80/141 (56%), Gaps = 1/141 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF V+ QW W PV++ + +L + W P N DRS M IITP Y NS++
Sbjct: 234 IVQKFFLVFNQWNWQQPVLLTRMVESDLNLNGWTP-SNFSDRSQLMQIITPVYPHQNSTF 292
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T ++ E+ + G +IC EI L A+W+ FE FF Y++Y+ + A D+
Sbjct: 293 NVSKSTKTILLEEIERGLKICNEIFLRNAKWTDAFEPADFFGRYKHYIVLTAKATSEDNY 352
Query: 122 LTWKGWVESRFRQLTLKIEQD 142
W G VES+ R+L L +E++
Sbjct: 353 KEWIGLVESKLRKLVLTLERN 373
>gi|401409652|ref|XP_003884274.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
gi|325118692|emb|CBZ54243.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
Length = 701
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 123/251 (49%), Gaps = 30/251 (11%)
Query: 2 LVSRFFRVYTQWRWPN-PVMMCPIEM----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ RFF VY+ W+W N PV++C I+ G F +W+P+ N +DR H +PIITPA+
Sbjct: 365 LIHRFFTVYSIWKWKNSPVLLCKIKEHTVEGLSNFKIWNPKVNVQDRHHLLPIITPAFPS 424
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICE----EIELGKAEWSALFEHYPFFEAYENYLQVD 112
MNS++ VSL T +V+T++F RI + + E+ E L F +++++L++
Sbjct: 425 MNSTHNVSLSTKRVITDEFANAKRIFDVWDKKKEISWTEALHLVLKPLDFTSFKHFLELQ 484
Query: 113 IVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPS-------KPCPN 165
I A + W GWVES+ R L ++E+ L C P+ P +P P
Sbjct: 485 IFAQNETVHRKWLGWVESKVRFLVRQLER----LAACPPFAAGGHTPKSEAAMTVRPIPC 540
Query: 166 SAFF----WGLSRKEVGTSKECQQ---FDFQGTVKNFRRGIDNY--RVRREGR-DIYFSY 215
+ F W + + QQ D + F I+ + R + EG+ + +
Sbjct: 541 TFSFQEPGWEYASSMLVALNFAQQPCVIDLRPAAGEFVDLINQWPERAQLEGQIQLRVKH 600
Query: 216 VCRRHLPSFVF 226
V R LP++V
Sbjct: 601 VRRSQLPAYVL 611
>gi|170054796|ref|XP_001863293.1| Poly(A) polymerase beta [Culex quinquefasciatus]
gi|167874980|gb|EDS38363.1| Poly(A) polymerase beta [Culex quinquefasciatus]
Length = 375
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 82/143 (57%), Gaps = 8/143 (5%)
Query: 1 MLVSRFFRVYTQWRWPN--PVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
MLV+R ++ PN PV + + LGF VWDPR N + R MPIITPAY N
Sbjct: 174 MLVARTCQL------PNVVPVFLKRPDTVNLGFQVWDPRVNVQGRFDLMPIITPAYPQQN 227
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADA 118
S++ VS T ++M +F G +I +EI LGKA W LFE FF Y ++ + + + +
Sbjct: 228 STFHVSSSTRKIMLNEFNRGMQITDEIMLGKAGWDKLFEAPSFFFKYRYFIVLLVTSNNT 287
Query: 119 DDLLTWKGWVESRFRQLTLKIEQ 141
DDLL W G VES+ R L +E+
Sbjct: 288 DDLLEWCGLVESKIRYLIQNLER 310
>gi|301118192|ref|XP_002906824.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262108173|gb|EEY66225.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 691
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 76/136 (55%), Gaps = 2/136 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ RFF V W+WP + +C +LG VW+ +R MPI+TPAY MNSS+
Sbjct: 262 LLLRFFMVLNNWKWPLAIQLCKTHDAKLGLEVWNANAG-HNRYQVMPILTPAYPSMNSSF 320
Query: 62 KVSLGTLQVMTEQFQCGNRICEEI-ELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
VS +L VM E+F+ G I +++ G +EW LFE FF +++YL V++ D+
Sbjct: 321 NVSTHSLTVMKEEFKRGLTIVQDVLSKGGSEWGPLFEPSEFFAVHQHYLAVEVYTEKQDE 380
Query: 121 LLTWKGWVESRFRQLT 136
W + ESR R+L
Sbjct: 381 EQAWCSFCESRMRKLV 396
>gi|397574427|gb|EJK49202.1| hypothetical protein THAOC_31949 [Thalassiosira oceanica]
Length = 843
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 113/254 (44%), Gaps = 29/254 (11%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYK 62
+ +FF V+ WRWPNPVM+ ELG VW+ + R P+ITPAY MNS+
Sbjct: 294 LRKFFLVFKSWRWPNPVMLTRPHDAELGLQVWNSHQAANMR-QVAPMITPAYPAMNSTLS 352
Query: 63 VSLGTLQVMTEQFQCGNRICE--------------EIELGKAEWSALFEHYPFFEAYENY 108
VS TLQ++ E+F G+ I + ++E G W LFE FF AY Y
Sbjct: 353 VSRQTLQILHEEFCRGHGIVDKLYKDYQRGAIDPADVESG-GMWGELFEPSDFFIAYPYY 411
Query: 109 LQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY----------ID 158
L + I D W G+VESR R+L + + L + +P K+ +
Sbjct: 412 LSLCITGPTLHDAQAWAGFVESRLRKLVSDMLGRSLPLSKIQLWPKKFDVCCADKTALLT 471
Query: 159 PSKPCPNSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRR-GIDNYRVRREGRDIYFSYVC 217
++ + +F G ++ E Q D + + NFR+ + + G DI
Sbjct: 472 HAQRANSITYFIGFRVDKLRMRGE--QLDIERQLSNFRKFELGRFHPLVPGMDILPKSFG 529
Query: 218 RRHLPSFVFPDGYK 231
+ LP+ F Y+
Sbjct: 530 VKELPTICFDGTYE 543
>gi|301092990|ref|XP_002997344.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262110742|gb|EEY68794.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 677
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 89/159 (55%), Gaps = 7/159 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMC-PIEMGELGFSV-WDPRKNPKDRSHRMPIITPAYHCMNS 59
LV RFF V WRWP P+++ P G+ V WDP+ N DR+H MPIITP + +N+
Sbjct: 391 LVHRFFSVLATWRWPTPILVAHPSNGGKTDQEVQWDPQHNIHDRAHLMPIITPGFPAVNT 450
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGK----AEWSALFEHYPFFEAYENYLQVDIVA 115
+ V++ TL+V+ E+F G RI +++ + W+ LF Y++++ +++ A
Sbjct: 451 AVNVNISTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYDHHVAIELRA 510
Query: 116 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPN 154
+ + L W +V SR R+L ++ Q T + HP P+
Sbjct: 511 PNEEALAEWSSFVASRTRKL-VETLQHTPSISALHPLPD 548
>gi|301111045|ref|XP_002904602.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
gi|262095919|gb|EEY53971.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
Length = 677
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 89/159 (55%), Gaps = 7/159 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMC-PIEMGELGFSV-WDPRKNPKDRSHRMPIITPAYHCMNS 59
LV RFF V WRWP P+++ P G+ V WDP+ N DR+H MPIITP + +N+
Sbjct: 391 LVHRFFSVLATWRWPTPILVAHPSNGGKTDQEVQWDPQHNIHDRAHLMPIITPGFPAVNT 450
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGK----AEWSALFEHYPFFEAYENYLQVDIVA 115
+ V++ TL+V+ E+F G RI +++ + W+ LF Y++++ +++ A
Sbjct: 451 AVNVNISTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYDHHVAIELRA 510
Query: 116 ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPN 154
+ + L W +V SR R+L ++ Q T + HP P+
Sbjct: 511 PNEEALAEWSSFVASRTRKL-VETLQHTPSISALHPLPD 548
>gi|340959697|gb|EGS20878.1| poly(A) polymerase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 675
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 89/159 (55%), Gaps = 4/159 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMG--ELGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
++V++FF + +W WP PV++ IE G +VW+P+ DR+H+MPIITPAY M
Sbjct: 261 VIVNKFFHIMVKWPWPLPVLLKDIEYGCPVTRVAVWNPKLYASDRNHKMPIITPAYPSMC 320
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAAD 117
+++ V T+ V+ ++ + G +I +EI +G+ W LF + FF ++ YL V +
Sbjct: 321 ATHNVGNSTMAVIQQELEKGAQITDEIMVGRRPWKDLFTKHTFFTNGFKYYLTVISSSRT 380
Query: 118 ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W G++ESR R L K+E + +L P+ Y
Sbjct: 381 KQAQNAWSGFIESRVRLLVNKLEMHPDIVL-ARPFNKGY 418
>gi|167536365|ref|XP_001749854.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771569|gb|EDQ85233.1| predicted protein [Monosiga brevicollis MX1]
Length = 604
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 123/274 (44%), Gaps = 39/274 (14%)
Query: 2 LVSRFFRVYTQW-----------------RWPN-PVMMCPIEMGELGFSVWDPRKNPKDR 43
++ +FFRVY+ W W N P+ + ++ LG WDPR NP+DR
Sbjct: 265 ILCKFFRVYSDWYGSNWIKHAREIWLAHGEWMNSPIKIKDVDDLHLGKRQWDPRSNPRDR 324
Query: 44 SHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAE--WSALFEHYPF 101
MPIITP Y N+++ V+ TL + +F G+R+C++I + WSA++E F
Sbjct: 325 YDLMPIITPVYPQQNAAFNVNESTLHRIVTEFSRGHRVCQDIMRASSNVPWSAVWEPIRF 384
Query: 102 FEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYI-DPS 160
F+ Y+ +++V AA D ++G VES R L L + Q T+ + YP Y DP
Sbjct: 385 FDEYQYFVRVVASAATESDRTEFEGLVESTVRHLVLNL-QYTDNVAYAMAYPKAYHEDPV 443
Query: 161 KPCPNSAFFWGLSRK------EVGTSKECQ------QFDFQGTVKNF-----RRGIDNYR 203
+ G R E G +E + + D QG + F R + R
Sbjct: 444 ADKDGTEATTGPWRTAWYLALEFGIKQEGRIEPAPSKLDLQGPLVAFYGRLRDRTVTMSR 503
Query: 204 VRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSR 237
++ + + LP +++P G HR R
Sbjct: 504 YDETTMNVDVQAMKQSKLPGYLYPGGVNPHRKVR 537
>gi|324975490|gb|ADY62673.1| PAPa [Candida orthopsilosis]
Length = 372
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++ +FF++Y+QW WP PV++ IE G L VW+PR DR HRMP+ITPAY M ++
Sbjct: 253 VILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITPAYPSMCAT 312
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 116
+ ++ T +++ +F G I EI G+ WS L E + FF Y+ YL V VAA
Sbjct: 313 HNITNSTQKIIMNEFNRGVEIIGEIFTGQKVWSHLLERHSFFHQYKFYLCV--VAA 366
>gi|268558234|ref|XP_002637107.1| C. briggsae CBR-PAP-1 protein [Caenorhabditis briggsae]
Length = 653
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 109/221 (49%), Gaps = 36/221 (16%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIE-----MGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
+V R F +++ W WP+PV++ ++ + L +WDPRK DR H MPIITPA+
Sbjct: 259 IVHRMFFIFSTWTWPHPVLLSALDQDRNDIPTLCDLIWDPRKKNSDRFHLMPIITPAFPE 318
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 116
NS++ V+ T ++ + G IC++I GKA W LF+ FF Y++Y+ + +
Sbjct: 319 QNSTHNVTRSTCHIIRNEICEGLEICKDITEGKATWEDLFKEVKFFSRYKHYIGI----S 374
Query: 117 DADDLLTWKG-----WVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAF--- 168
D + +G ++ESR R L +E++ + +L H NK+ +P PN+ F
Sbjct: 375 DHGYIHRRRGIELWRFLESRIRLLVQSLERNQD-ILIAHNDTNKH----RPSPNAKFDVR 429
Query: 169 ---------FWGLSRKEVGTSKECQQFDFQGTVKNFRRGID 200
F GL E T+ D ++ FR ++
Sbjct: 430 PENTRITIWFIGLEFAEHATN-----LDLTSEIQRFRTNVE 465
>gi|303388385|ref|XP_003072427.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
gi|303301567|gb|ADM11067.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
Length = 505
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 87/155 (56%), Gaps = 3/155 (1%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V +FF +++ W+WP PV++ P+ VWDP+ P D+ HRMP+ITPAY M +++
Sbjct: 257 IVCKFFELFSSWKWPTPVVLRPVVDLNYNLKVWDPKVYPSDKYHRMPVITPAYPSMCATH 316
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
VS T V++ +F + I E K ++ +F+ FF Y+ + ++ ++ + +
Sbjct: 317 NVSNSTQHVISMEFARAHEILSSPE--KNDFRKIFDLSDFFSRYKLFAEILAMSTEEEGF 374
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
W+G+VES+ R L K E + +L P+P +
Sbjct: 375 PKWEGYVESKVRILASKFEA-VDDILYAIPFPKAF 408
>gi|355709241|gb|AES03526.1| poly polymerase alpha [Mustela putorius furo]
Length = 358
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 114/254 (44%), Gaps = 15/254 (5%)
Query: 39 NPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEH 98
NP DR H MPIITPAY NS+Y VS+ T VM E+F+ G I +EI L KAEWS LFE
Sbjct: 2 NPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEA 61
Query: 99 YPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNK 155
FF+ Y++Y+ + A L W G VES+ R L +E++ T + +P
Sbjct: 62 PNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAP 121
Query: 156 YIDPSKPCPNSAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIY 212
+P K + + GL K+ S+ +D Q R N ++ I
Sbjct: 122 KENPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIA 181
Query: 213 FSYVCRRHLPSFVFPDGYKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKRKKEHEIKE 272
+V R+ L + PS ++ E V++ S L ++ +
Sbjct: 182 AMHVKRKQLHQLL---------PSHVLQKKKKHSTEGVRLTPLNDSSLDLSMDSDNSMSV 232
Query: 273 VRPDKSVKQAFISS 286
P ++K + ++S
Sbjct: 233 PSPTSAMKTSPLNS 246
>gi|237833947|ref|XP_002366271.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
gi|211963935|gb|EEA99130.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
Length = 811
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 88/153 (57%), Gaps = 9/153 (5%)
Query: 2 LVSRFFRVYTQWRWPN-PVMMCPIEM----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV RFF VY+ W W N PV++C I+ G F VW+P+ N +DR H +PIITPA+
Sbjct: 473 LVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHLLPIITPAFPS 532
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICE----EIELGKAEWSALFEHYPFFEAYENYLQVD 112
MNS++ VSL T +V+TE+F RI + + E+ E L F +++++L++
Sbjct: 533 MNSTHNVSLSTKRVITEEFANAKRIFDIWDKKKEISWTEALHLVLKPLDFTSFKHFLELQ 592
Query: 113 IVAADADDLLTWKGWVESRFRQLTLKIEQDTNG 145
+ A + W GWVES+ R L ++E+ G
Sbjct: 593 VFAQNETVHRKWLGWVESKVRFLVRQLERLAAG 625
>gi|221486493|gb|EEE24754.1| poly(A) polymerase, putative [Toxoplasma gondii GT1]
Length = 795
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 88/153 (57%), Gaps = 9/153 (5%)
Query: 2 LVSRFFRVYTQWRWPN-PVMMCPIEM----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV RFF VY+ W W N PV++C I+ G F VW+P+ N +DR H +PIITPA+
Sbjct: 462 LVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHLLPIITPAFPS 521
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICE----EIELGKAEWSALFEHYPFFEAYENYLQVD 112
MNS++ VSL T +V+TE+F RI + + E+ E L F +++++L++
Sbjct: 522 MNSTHNVSLSTKRVITEEFANAKRIFDIWDKKKEISWTEALHLVLKPLDFTSFKHFLELQ 581
Query: 113 IVAADADDLLTWKGWVESRFRQLTLKIEQDTNG 145
+ A + W GWVES+ R L ++E+ G
Sbjct: 582 VFAQNETVHRKWLGWVESKVRFLVRQLERLAAG 614
>gi|367027594|ref|XP_003663081.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
gi|347010350|gb|AEO57836.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
Length = 654
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 93/170 (54%), Gaps = 5/170 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMG--ELGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
++V++FF + +W WP PV++ IE G +VW+P+ DR+HRMPIITP+Y M
Sbjct: 260 VIVNKFFHIMLKWPWPLPVLLKDIEYGCPVTRVAVWNPKIYASDRNHRMPIITPSYPSMC 319
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEA-YENYLQVDIVAAD 117
+++ V ++ V+ ++ + G ++ E+I GK W LF + FF + + YL V +
Sbjct: 320 ATHNVGRSSMAVIKDELEKGVQVTEDIMRGKRPWKDLFTKHTFFTSGFRYYLTVISSSRT 379
Query: 118 ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSA 167
W G+VESR R L K+E + L P+ NK D C N+A
Sbjct: 380 KKAQNVWSGFVESRVRLLVNKLEMHPSISL-ARPF-NKGYDREHRCKNNA 427
>gi|346972005|gb|EGY15457.1| Poly(A) polymerase pla1 [Verticillium dahliae VdLs.17]
Length = 604
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 3/166 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF + +W WP PV++ +E G L VW+P+ D+ H MPIITPAY M ++
Sbjct: 262 VIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYRGDQFHLMPIITPAYPSMCAT 321
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ ++ + V+ + Q G I + + L K W LF + FF Y+ Y+ V + +
Sbjct: 322 FNITKSAMTVIQRELQRGCEITDNVMLSKRPWGDLFIKHTFFTSGYKYYISVVTTSTTKE 381
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN 165
W G+VES+ R L +EQ + + H + NK D C N
Sbjct: 382 AHKIWSGYVESKVRVLVQGLEQHQS-IAIAHAF-NKGYDRRHVCHN 425
>gi|221508263|gb|EEE33850.1| poly(A) polymerase, putative [Toxoplasma gondii VEG]
Length = 778
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 88/153 (57%), Gaps = 9/153 (5%)
Query: 2 LVSRFFRVYTQWRWPN-PVMMCPIEM----GELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV RFF VY+ W W N PV++C I+ G F VW+P+ N +DR H +PIITPA+
Sbjct: 443 LVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRHHLLPIITPAFPS 502
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICE----EIELGKAEWSALFEHYPFFEAYENYLQVD 112
MNS++ VSL T +V+TE+F RI + + E+ E L F +++++L++
Sbjct: 503 MNSTHNVSLSTKRVITEEFANAKRIFDIWDKKKEISWTEALHLVLKPLDFTSFKHFLELQ 562
Query: 113 IVAADADDLLTWKGWVESRFRQLTLKIEQDTNG 145
+ A + W GWVES+ R L ++E+ G
Sbjct: 563 VFAQNETVHRKWLGWVESKVRFLVRQLERLAAG 595
>gi|367050218|ref|XP_003655488.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
gi|347002752|gb|AEO69152.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
Length = 652
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 5/170 (2%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGE--LGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
++V++FF + +W WP PV++ IE VW+P+ DR+H+MPIITPAY M
Sbjct: 260 VIVNKFFNIMLKWPWPLPVLLKDIEYNGPVTRVPVWNPKLYASDRNHKMPIITPAYPSMC 319
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEA-YENYLQVDIVAAD 117
+++ V ++ V+ ++ + G + EEI LG+ W LF + FF + ++ YL V +
Sbjct: 320 ATHNVGRSSMVVIQQELKKGAEVTEEIMLGRRPWKDLFTKHTFFTSGFKYYLTVISSSRT 379
Query: 118 ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSA 167
W G++ESR R L KIE + L P+ NK D C N A
Sbjct: 380 KKAQNVWSGFIESRVRLLVNKIEMHPSIAL-ARPF-NKGYDRMHRCKNDA 427
>gi|402077328|gb|EJT72677.1| Poly(A) polymerase pla1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 633
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF + QW WP PV++ PI G L VW+PR D H MP+ITPAY M ++
Sbjct: 261 VIVNKFFSILLQWPWPQPVLLKPIGDGPLQVRVWNPRVYKGDSYHLMPVITPAYPSMCAT 320
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ V+ ++ V+ + Q I I W +F + FF + ++ Y+QV + D +
Sbjct: 321 FNVTRSSMTVIKRELQLAAEITNNIMCSTKPWKDMFAKHTFFTKDFKYYMQVISASRDKE 380
Query: 120 DLLTWKGWVESRFRQLTLKIEQ 141
W G+VES+ R L +E+
Sbjct: 381 AHKIWSGFVESKVRMLVQSLER 402
>gi|440468857|gb|ELQ37991.1| Poly(A) polymerase pla1 [Magnaporthe oryzae Y34]
Length = 611
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 81/142 (57%), Gaps = 1/142 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF + +W WP PV++ IE G L +W+P+ P DR H MPIITPAY M ++
Sbjct: 261 VVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDRYHLMPIITPAYPSMCAT 320
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ ++ + V+ + + I +GK W LF+ + FF + ++ Y+QV + D +
Sbjct: 321 FNITKSSKDVIGRELVKAADLTNLIMVGKLPWKDLFQKHTFFTKDFKYYIQVIAASKDKE 380
Query: 120 DLLTWKGWVESRFRQLTLKIEQ 141
W G+VES+ R L +E+
Sbjct: 381 SHKLWSGFVESKVRLLVQGLER 402
>gi|440487552|gb|ELQ67335.1| Poly(A) polymerase pla1 [Magnaporthe oryzae P131]
Length = 484
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 81/142 (57%), Gaps = 1/142 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF + +W WP PV++ IE G L +W+P+ P DR H MPIITPAY M ++
Sbjct: 134 VVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDRYHLMPIITPAYPSMCAT 193
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ ++ + V+ + + I +GK W LF+ + FF + ++ Y+QV + D +
Sbjct: 194 FNITKSSKDVIGRELVKAADLTNLIMVGKLPWKDLFQKHTFFTKDFKYYIQVIAASKDKE 253
Query: 120 DLLTWKGWVESRFRQLTLKIEQ 141
W G+VES+ R L +E+
Sbjct: 254 SHKLWSGFVESKVRLLVQGLER 275
>gi|389639278|ref|XP_003717272.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
gi|351643091|gb|EHA50953.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
Length = 616
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 81/142 (57%), Gaps = 1/142 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF + +W WP PV++ IE G L +W+P+ P DR H MPIITPAY M ++
Sbjct: 261 VVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDRYHLMPIITPAYPSMCAT 320
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ ++ + V+ + + I +GK W LF+ + FF + ++ Y+QV + D +
Sbjct: 321 FNITKSSKDVIGRELVKAADLTNLIMVGKLPWKDLFQKHTFFTKDFKYYIQVIAASKDKE 380
Query: 120 DLLTWKGWVESRFRQLTLKIEQ 141
W G+VES+ R L +E+
Sbjct: 381 SHKLWSGFVESKVRLLVQGLER 402
>gi|145505515|ref|XP_001438724.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405896|emb|CAK71327.1| unnamed protein product [Paramecium tetraurelia]
Length = 487
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 27/211 (12%)
Query: 2 LVSRFFRVYTQWRW---PNPVMMCPIEMGELGFSVW-DPRKNPKDRSHR-MPIITPAYHC 56
L+ RFF +++QW+W P + C +W + + + H M I+TP Y
Sbjct: 250 LIERFFFIFSQWKWNELPVVIQKCD--------EIWRNSLFEQQQKQHNVMSILTPVYPY 301
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 116
+NS+Y VS T ++ EQ + N I ++I L + +WS L + FF+ Y YLQ+ ++
Sbjct: 302 INSAYNVSNCTFTIIEEQLKLANIIMQKICLSELQWSDLLKKIQFFDIYYTYLQIRALSK 361
Query: 117 DADDLLTWKGWVESRFRQLTLKIEQ-DTNGLLQCHPYPNKYID-----PSKPCPNS---- 166
+ DDL+ WK +ES+ R+L +++ D N ++ H YP + P S
Sbjct: 362 NKDDLIQWKSHIESKLRKLNKMLDEGDVNKAIEFHLYPKSFQTDYVQGDENDTPGSLFNF 421
Query: 167 --AFFWGLSRKEVGTSKECQQFDFQGTVKNF 195
+FF+G+ K+ KE + D + ++ F
Sbjct: 422 SESFFYGIRIKDEELVKE--KLDIENIIRQF 450
>gi|256066067|ref|XP_002570474.1| poly(A) polymerase [Schistosoma mansoni]
gi|350644967|emb|CCD60333.1| poly(A) polymerase, putative [Schistosoma mansoni]
Length = 496
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 78/156 (50%), Gaps = 5/156 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIE-MGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
M+V FF +++QW WP PV + E + L VWDPR NP D+ H MPI+TP+Y NS
Sbjct: 265 MIVYLFFTIFSQWPWPKPVRLRECEYIASLCLPVWDPRLNPSDQYHLMPILTPSYPSQNS 324
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
+Y V ++ + + G + + K WS LFE FF+ Y +Y+ V +V
Sbjct: 325 TYNVQRSNRIIIERELKQGLNVVRASMMHKGSWSNLFEAAFFFQ-YRHYVVVIVVGNTKH 383
Query: 120 DLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPY 152
+ G VESR R L E + + CH Y
Sbjct: 384 TFIELCGLVESRLRVLVSNFEVNRYVKMAHVNCHAY 419
>gi|341895922|gb|EGT51857.1| hypothetical protein CAEBREN_12609 [Caenorhabditis brenneri]
Length = 528
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 120/242 (49%), Gaps = 20/242 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCP-----IEMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV + F V++ W +P+P+++C +M L W +N DR H MPIITPA+
Sbjct: 263 LVQKVFYVFSTWNYPSPIVLCMPTRERADMLTLDNLCWG--RNHADRFHLMPIITPAFPE 320
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 116
NS++ VS T++V+ ++ IC +I GK +W LFE F+ Y++++ + + A
Sbjct: 321 QNSTHNVSRSTMEVIKKEMADALVICNDIFDGKCDWKFLFEEVNFYSQYKHFVVMKLDAK 380
Query: 117 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 176
+ ++ G++ESRFRQL E++ G+ H P K SK S +F GL +
Sbjct: 381 KEETENSYGGFLESRFRQLIGAFERN-RGIKMAHLNPKKCQPTSK--AQSLWFIGLEFDD 437
Query: 177 VGTSKECQQFDFQGTVKNFRRGIDNYRVRR----EGRDIYFSYVCRRHLPSFVFPDGYKW 232
V + D + NF+ + N + ++ E ++ SY R L ++ P K
Sbjct: 438 V-----VKNMDLTREIDNFKWNL-NVQAKQIAGFEEVELDISYAKRSQLIKYMPPAELKK 491
Query: 233 HR 234
R
Sbjct: 492 GR 493
>gi|357112525|ref|XP_003558059.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 537
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMM---CPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
L S FF +++ W WP PV + P+ W P D MPI+ P +
Sbjct: 303 LFSMFFDIFSHWPWPLPVALHDQAPL---------WGP-----DGCSLMPIVMPCFPPEF 348
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADA 118
+ ++ T + E+ + G + ++I +W+ +F YP+ YE++L + + A
Sbjct: 349 CASSITKSTFNKIKEELRRGFALTKDIRNVDIDWTWIFAPYPYTVKYEHFLHMVLSAPTT 408
Query: 119 DDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
++L W GWV+SRFR L LK+E + C P P++ ++ + PN FFWGL +
Sbjct: 409 EELRDWVGWVKSRFRNLILKLESLD---VDCDPDPSEKVNHTIAAPNVVFFWGLIYRSTK 465
Query: 179 TSKECQQFDFQGTVKN 194
S + DF +V N
Sbjct: 466 ISASSLKNDFMKSVIN 481
>gi|341899942|gb|EGT55877.1| hypothetical protein CAEBREN_08096 [Caenorhabditis brenneri]
Length = 528
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 118/233 (50%), Gaps = 20/233 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMC-PI----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV + F V++ W +P+P+++C P +M L W +N DR H MPIITPA+
Sbjct: 263 LVQKVFYVFSTWNYPSPIVLCMPTRERPDMLALDNLCWG--RNHADRFHLMPIITPAFPE 320
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 116
NS++ VS T++V+ ++ IC ++ GK +W LFE F+ Y++++ + + A
Sbjct: 321 QNSTHNVSRSTMEVIKKEMTDALTICNDVFEGKCDWKHLFEEVNFYSQYKHFVVMKLDAK 380
Query: 117 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 176
+ ++ G++ESR R L E++ G+ H P K SK S +F GL E
Sbjct: 381 KEETENSYGGFLESRLRVLVGAFERN-RGIKLAHLNPKKCQPTSK--SQSLWFIGLEFDE 437
Query: 177 VGTSKECQQFDFQGTVKNFRRGIDNYRVRR----EGRDIYFSYVCRRHLPSFV 225
V + D + NF+ + N + ++ E ++ SYV R HL ++
Sbjct: 438 V-----VKNMDLTREINNFKWNL-NVQAKQIAGFEDVELDISYVKRSHLIKYL 484
>gi|407919057|gb|EKG12314.1| hypothetical protein MPH_10619 [Macrophomina phaseolina MS6]
Length = 590
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 100/194 (51%), Gaps = 16/194 (8%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+++ RFF + + W WP P+M+ IE G L VW+P+ P D+ H MPIITPAY M ++
Sbjct: 259 VVLGRFFYLMSTWPWPRPIMLKEIEDGPLQVRVWNPQIYPGDKRHLMPIITPAYPSMCAT 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ ++ T +V+ + ++I +I K W LF+ + FF + ++ YL + + D +
Sbjct: 319 HNITHSTQKVIKRELLRASQITSDILSEKRRWRDLFDRHTFFTQDFKYYLSIVAASHDKE 378
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGT 179
W VES+ R+L IEQ P + ++ ++P F G R
Sbjct: 379 AQDNWSSSVESKVRKLVGLIEQS----------PAEDVELAQP-----FNKGFKRVHHCK 423
Query: 180 SKECQQFDFQGTVK 193
++E ++ QG+VK
Sbjct: 424 TEEEKEEVLQGSVK 437
>gi|428168713|gb|EKX37654.1| hypothetical protein GUITHDRAFT_41551, partial [Guillardia theta
CCMP2712]
Length = 336
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 78/164 (47%), Gaps = 4/164 (2%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG--ELGFSVWD-PRKNPKDRSHRMPIITPAYHCMN 58
L+ FF Y QW+WP PV + I +L VW DR H MPII+P Y N
Sbjct: 154 LLYFFFFTYCQWKWPQPVELAEIVANSHDLNLPVWGYGATEMSDRRHLMPIISPCYPAQN 213
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADA 118
++ VS TL++M E F +C++I GKA W LFE F Y N+LQ+ A
Sbjct: 214 TAALVSRSTLKIMKEMFIRAMGVCKQIHEGKAGWCDLFEPVDLFSTYANFLQIQASARSK 273
Query: 119 DDLLTWKGWVESRFRQLTLKIEQDTNGLL-QCHPYPNKYIDPSK 161
D WKG+ + + +E+ + L + HP Y P K
Sbjct: 274 ADHNMWKGFCAANIHNMISYLERCPDAYLDRAHPIQRSYAKPRK 317
>gi|224001714|ref|XP_002290529.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973951|gb|EED92281.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 367
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 76/149 (51%), Gaps = 16/149 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V+ WRWPNPVM+ ELG VW+ + R P++TPAY MNS+
Sbjct: 221 LLRKFFLVFKSWRWPNPVMLTKPHDAELGLPVWNSFQAANMR-QVAPMVTPAYPAMNSTL 279
Query: 62 KVSLGTLQVMTEQFQCGNRIC--------------EEIELGKAEWSALFEHYPFFEAYEN 107
VS TLQ++ E+F G+ + ++IE G W LFE FF Y
Sbjct: 280 SVSRQTLQILHEEFCRGHNVVDKLYKDFQKGALDKDKIESGDI-WKELFEPSDFFIGYPY 338
Query: 108 YLQVDIVAADADDLLTWKGWVESRFRQLT 136
YL + IV D W G+VESR R+L
Sbjct: 339 YLSLCIVGPSQADAQAWAGFVESRLRKLV 367
>gi|341895379|gb|EGT51314.1| hypothetical protein CAEBREN_01393 [Caenorhabditis brenneri]
Length = 1333
Score = 97.4 bits (241), Expect = 8e-18, Method: Composition-based stats.
Identities = 69/233 (29%), Positives = 117/233 (50%), Gaps = 20/233 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMC-PI----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV + F V++ W +P+P+++C P +M L W +N DR H MPIITPA+
Sbjct: 1068 LVQKVFYVFSTWNYPSPIVLCMPTRERPDMLALDNLCWG--RNHADRFHLMPIITPAFPE 1125
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 116
NS++ VS T++V+ ++ IC ++ GK +W LFE F+ Y++++ + + A
Sbjct: 1126 QNSTHNVSRSTMEVIKKEMADALIICNDVFEGKCDWKFLFEEVNFYSQYKHFVVMKLDAK 1185
Query: 117 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 176
+ ++ G++ESR R L E++ G+ H P K SK S +F GL E
Sbjct: 1186 KEETENSYGGFLESRLRVLVGAFERN-RGIKLAHLNPKKCQPTSK--SQSLWFIGLEFDE 1242
Query: 177 VGTSKECQQFDFQGTVKNFRRGIDNYRVRR----EGRDIYFSYVCRRHLPSFV 225
V + D + NF+ + N + ++ E ++ SYV R L ++
Sbjct: 1243 V-----VKNMDLTREIDNFKWNL-NVQAKQIAGFEDVELDISYVKRSQLIKYL 1289
>gi|170036999|ref|XP_001846348.1| poly a polymerase [Culex quinquefasciatus]
gi|167879976|gb|EDS43359.1| poly a polymerase [Culex quinquefasciatus]
Length = 531
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 59/95 (62%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYK 62
V +FF V+ +W+WP PV + + LGF VWD R N +DR H M IITPAY NS++
Sbjct: 227 VHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMSIITPAYPQQNSTFH 286
Query: 63 VSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFE 97
VS T +VM +F +I +EI LGKA W LFE
Sbjct: 287 VSSSTRKVMLNEFNSDMQITDEIMLGKAGWDKLFE 321
>gi|341899970|gb|EGT55905.1| hypothetical protein CAEBREN_16296 [Caenorhabditis brenneri]
Length = 526
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 118/233 (50%), Gaps = 20/233 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMC-PI----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV + F V++ W +P+P+++C P +M L W +N DR H MPIITPA+
Sbjct: 261 LVQKVFYVFSTWNYPSPIVLCMPTRERSDMLALDNLCWG--RNHADRFHLMPIITPAFPE 318
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 116
NS++ VS T++V+ ++ IC +I GK++W LFE F+ Y++++ + + A
Sbjct: 319 QNSTHNVSRSTMEVIKKEMADALVICNDIFEGKSDWKFLFEEVNFYSQYKHFVVMKLDAK 378
Query: 117 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 176
+ ++ G++ESR R L E++ G+ H P K SK S +F GL E
Sbjct: 379 KEETENSYGGFLESRLRVLVGAFERN-RGIKLAHLNPKKCQPTSK--AQSIWFIGLEFDE 435
Query: 177 VGTSKECQQFDFQGTVKNFRRGIDNYRVRR----EGRDIYFSYVCRRHLPSFV 225
V + D + NF+ + N + ++ E ++ SYV R L ++
Sbjct: 436 V-----VKNMDLTREIDNFKWNL-NVQAKQIAGFEEVELDISYVKRSQLIKYL 482
>gi|302409142|ref|XP_003002405.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
gi|261358438|gb|EEY20866.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
Length = 575
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V++FF + +W WP PV++ +E G L VW+P+ D+ H MPIITPAY M ++
Sbjct: 262 VIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYRGDQFHLMPIITPAYPSMCAT 321
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ ++ + V+ + Q G I + + L K W LF + FF Y+ Y+ V + +
Sbjct: 322 FNITKSAMTVIQRELQRGCEITDNVMLSKRPWGDLFIKHTFFTSGYKYYISVVTTSTTKE 381
Query: 120 DLLTWKGWVESRFRQLTLK 138
W G+VES+ ++ +L+
Sbjct: 382 AHKIWSGYVESKVQEGSLQ 400
>gi|341895839|gb|EGT51774.1| hypothetical protein CAEBREN_25710 [Caenorhabditis brenneri]
Length = 527
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 117/233 (50%), Gaps = 20/233 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMC-PI----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
LV + F V++ W +P+P+++C P +M L W +N DR H MPIITPA+
Sbjct: 262 LVQKVFYVFSTWNYPSPIVLCMPTRERPDMLTLDNLCWG--RNHADRFHLMPIITPAFPE 319
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 116
NS++ VS T++V+ ++ IC ++ GK +W LFE F+ Y++++ + + A
Sbjct: 320 QNSTHNVSRSTMEVIKKEMADALVICNDVFEGKCDWKHLFEELNFYSQYKHFVVLKLDAK 379
Query: 117 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 176
+ ++ G++ESR R L E++ G+ H P K SK S +F GL E
Sbjct: 380 KEETENSYGGFLESRLRVLVGAFERN-RGIKLAHLNPKKCQPTSK--AQSLWFIGLEFDE 436
Query: 177 VGTSKECQQFDFQGTVKNFRRGIDNYRVRR----EGRDIYFSYVCRRHLPSFV 225
V + D + NF+ + N + ++ E ++ SYV R L ++
Sbjct: 437 V-----VKNMDLTREIDNFKWNL-NVQAKQIPGFEDVELDISYVKRSQLIKYL 483
>gi|443916802|gb|ELU37750.1| polymerase [Rhizoctonia solani AG-1 IA]
Length = 508
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 91/181 (50%), Gaps = 45/181 (24%)
Query: 14 RWPNPVMMCPIE--MGELGFS------VWDPRKNPKDRSHRMPIITPAYHCMNSSYKVSL 65
+WP P+++ IE + EL FS VW+PR DR+H MPIITP+Y M S++ V+
Sbjct: 77 KWPQPILLQQIEEEVKELDFSKRMNFRVWNPRVC--DRNHLMPIITPSYPSMCSTHNVTR 134
Query: 66 GTLQVMTEQFQ---------C---------GNRICEEIELGKAEWSALFEHYPFFEAYEN 107
T+ VM ++F C G++I E+I +AEWS LF + FF+ Y
Sbjct: 135 STMSVMKDEFMRGKFSYLLLCTDDTNNKRPGSQIVEQIMFRRAEWSELFAKHDFFQKYRY 194
Query: 108 YLQVDIVAADADDLLTW----------------KGWVESRFRQLTLKIEQDTNGLLQCHP 151
YLQ+ + A+D L W G VESR RQL +K+E + L HP
Sbjct: 195 YLQIIASSGKAEDQLKWYVSPFRAWVVSEAASRSGTVESRLRQLVMKLEF-VDQLEVAHP 253
Query: 152 Y 152
+
Sbjct: 254 F 254
>gi|123480837|ref|XP_001323419.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121906284|gb|EAY11196.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 508
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 105/231 (45%), Gaps = 8/231 (3%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML FF +QW WP P+ + GEL WDP D + MPIITPAY NS
Sbjct: 262 MLALYFFSEISQWTWPTPIYINRPNYGEL--LSWDPTTE-SDHNDVMPIITPAYPSTNSQ 318
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ + + ++ +I I G WSA+ E + FFE+Y+NY+++DI A D
Sbjct: 319 RSATTSSRNRIIQEMVKALQIMPNIITGDLPWSAVCEDHEFFESYKNYIEIDIRAEGLAD 378
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHP-YPNKYIDPSKPCPNSAFFWGLSRKEVGT 179
WKG V S+ ++L +E ++C P +P+ + + + F GL E
Sbjct: 379 YNWWKGTVISKVKRLITSLEAIER--VKCAPIFPSSFDRENNNKYQGSIFIGL-ETEKTK 435
Query: 180 SKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVC-RRHLPSFVFPDG 229
E ++ + +K + I R I V R+ +P F FP+G
Sbjct: 436 DDEGKKVNPSAAIKKYLEEIYKLTNRPLSTKIENPQVINRKKIPDFCFPNG 486
>gi|402581474|gb|EJW75422.1| hypothetical protein WUBG_13666 [Wuchereria bancrofti]
Length = 351
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 85/162 (52%), Gaps = 13/162 (8%)
Query: 15 WPNPVMMCPIE------MGELGFSVWDPR------KNPKDRSHRMPIITPAYHCMNSSYK 62
WP+PV++ E M L VWDPR ++P R H MPI+TPA+ NS++
Sbjct: 37 WPHPVVLKETEVSHARDMPSLQELVWDPRSRSGDRESPSRRFHLMPIVTPAFPQQNSTFN 96
Query: 63 VSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLL 122
V+ +L+++ + + G +I GKA WSALFE FF Y+++L + ++A D L
Sbjct: 97 VTKSSLKIIMNEIEEGLVTINDIMKGKAGWSALFEEVNFFSRYKHFLALLCLSATEQDEL 156
Query: 123 TWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCP 164
W G VES+ R L +E+ + CH + Y + P P
Sbjct: 157 VWCGLVESKIRFLIASLERR-ESIRVCHVHTKYYQPRNDPFP 197
>gi|225432026|ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
gi|296083219|emb|CBI22855.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 18/224 (8%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+L+S FF+ ++ W WP PV + E G L P ++ MPI P
Sbjct: 305 VLMSSFFKTFSGWPWPTPVAL---EDGRL------PTGGTRETRALMPIQLPCSPYGYCH 355
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
++ T +T + G+ + ++ +W+ +FE + + + Y ++++ + +++ D+
Sbjct: 356 SNITKSTFYRITTELTLGHALTRDLLRLDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDE 415
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L W GWV+SRFR L K+E+ GL C P P ++IDP PN FFWG+ + S
Sbjct: 416 LGDWVGWVKSRFRFLLAKVEE-VQGL--CDPNPTEFIDPDAGGPNVVFFWGVQPGRINFS 472
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSF 224
D +F + I+N + + S + LP +
Sbjct: 473 ------DIDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGY 510
>gi|349603143|gb|AEP99064.1| Poly(A) polymerase gamma-like protein, partial [Equus caballus]
Length = 435
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 94/194 (48%), Gaps = 22/194 (11%)
Query: 42 DRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPF 101
DR H MPIITPAY NS+Y VS T VM E+F+ G + +EI GK++WS L E F
Sbjct: 1 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNF 60
Query: 102 FEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP----- 153
F+ Y +Y+ + A+ ++ W G VES+ R L +E++ T + +P
Sbjct: 61 FQKYRHYIVLTASASTEENHSEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEH 120
Query: 154 ---NKYIDPSKPCPNSAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRRE 207
N Y+ S +F G+ + V ++ +D Q R +N + +E
Sbjct: 121 HKDNNYV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKE 172
Query: 208 GRDIYFSYVCRRHL 221
G I ++V ++ L
Sbjct: 173 GMKIEATHVKKKQL 186
>gi|147856999|emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
Length = 604
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 18/228 (7%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
+L+S FF+ ++ W WP PV + E G L P ++ MPI P
Sbjct: 346 VLMSSFFKTFSGWPWPTPVAL---EDGRL------PTGGTRETRALMPIQLPCSPYGYCH 396
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
++ T +T + G+ + ++ +W+ +FE + + + Y ++++ + +++ D+
Sbjct: 397 SNITKSTFYRITTELTLGHALTRDLLRLDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDE 456
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L W GWV+SRFR L K+E+ GL C P P ++IDP PN FFWG+ + S
Sbjct: 457 LGDWVGWVKSRFRFLLAKVEE-VQGL--CDPNPTEFIDPDAGEPNVVFFWGVQPGRINFS 513
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 228
D +F + I+N + + S + LP + D
Sbjct: 514 ------DIDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGYAXLD 555
>gi|308482424|ref|XP_003103415.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
gi|308259836|gb|EFP03789.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
Length = 388
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 90/184 (48%), Gaps = 20/184 (10%)
Query: 18 PVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQC 77
P+M M L VWDPR N DR H MPIITPA+ NS++ VS TL ++ E+ +
Sbjct: 144 PIMTL---MSTLNNLVWDPRINYSDRFHLMPIITPAFPEQNSTHNVSKSTLHIIQEEMKS 200
Query: 78 GNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTL 137
IC++I G A W+ LFE FF Y +++ + + + G+ ESR RQL
Sbjct: 201 ALLICDQIHAGSATWNNLFEEVNFFSRYRHFVALSMNEESNE------GFFESRIRQLVQ 254
Query: 138 KIEQDTNGLLQCHPYPNKYIDPSKPCPN-SAFFWGLSRKEVGTSKECQQFDFQGTVKNFR 196
+E++ L H P K+ K N S +F GL E + D ++ F+
Sbjct: 255 IMERNCQVKL-AHINPKKF----KSVQNASVWFLGLELIE-----NVKNLDLTAEIEGFK 304
Query: 197 RGID 200
+ ++
Sbjct: 305 KNVE 308
>gi|145338191|ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana]
gi|62320636|dbj|BAD95301.1| poly(A) polymerase [Arabidopsis thaliana]
gi|332640894|gb|AEE74415.1| poly(A) polymerase 3 [Arabidopsis thaliana]
Length = 507
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 20/221 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L++ FF + W+WP PV++ D + MPI P +
Sbjct: 248 LLANFFYTFAHWQWPTPVVLLE-----------DTYPSTGAPPGLMPIQLPCGSHQYCNS 296
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
++ T + +F G+ + ++ W LFE YP+ Y + ++ + AA+ +DL
Sbjct: 297 TITRSTFYKIVAEFLLGHNLTKDYLKLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDL 356
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTSK 181
W GWV+SRFR L +KIE+ G+ C P P +Y++ PN F+WGL + + S
Sbjct: 357 SDWVGWVKSRFRCLLIKIEE-VYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRTINVS- 412
Query: 182 ECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLP 222
D + +F + +++ R I + V LP
Sbjct: 413 -----DIESVKIDFLKNVNSGSFRGTVGRIQLTLVKASQLP 448
>gi|449296009|gb|EMC92029.1| hypothetical protein BAUCODRAFT_78629 [Baudoinia compniacensis UAMH
10762]
Length = 594
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 110/254 (43%), Gaps = 25/254 (9%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++V RFF + +W WP PV + L WDP + D H MPI+TPA N++
Sbjct: 257 LIVQRFFFIVKRWNWPKPVFLQHKVESSLVIREWDPNTSRHDAGHLMPILTPAVPSTNTA 316
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADAD 119
+ V T VM + + G +I +I W ALFE + FF AY++Y+ V + D
Sbjct: 317 HTVGPSTKMVMMRELERGEQIIADIYSKSKPWKALFERHNFFTTAYKHYICVVTASKSKD 376
Query: 120 DLLTWKGWVESRFRQLTLKIE-QDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
W G V+S+ + L IE D N + P+ NK G R
Sbjct: 377 AQDAWAGLVQSKIKWLVQGIESSDANSIELVQPF-NK---------------GFERVHDC 420
Query: 179 TSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRH 238
+E Q +G+++ +G V+ E D + L + DG + H P+
Sbjct: 421 QGEEELQKTLEGSLEFQVKG-----VKTETTDQLTG--IKTQLVAQSDTDGVEPHAPNGD 473
Query: 239 FNEQSGKPCEDVKM 252
++Q G P + K+
Sbjct: 474 ASKQEGTPGQSQKV 487
>gi|12322673|gb|AAG51325.1|AC020580_5 poly(A) polymerase, putative; 41591-39333 [Arabidopsis thaliana]
Length = 482
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 20/221 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L++ FF + W+WP PV++ D + MPI P +
Sbjct: 223 LLANFFYTFAHWQWPTPVVLLE-----------DTYPSTGAPPGLMPIQLPCGSHQYCNS 271
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
++ T + +F G+ + ++ W LFE YP+ Y + ++ + AA+ +DL
Sbjct: 272 TITRSTFYKIVAEFLLGHNLTKDYLKLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDL 331
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTSK 181
W GWV+SRFR L +KIE+ G+ C P P +Y++ PN F+WGL + + S
Sbjct: 332 SDWVGWVKSRFRCLLIKIEE-VYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRTINVS- 387
Query: 182 ECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLP 222
D + +F + +++ R I + V LP
Sbjct: 388 -----DIESVKIDFLKNVNSGSFRGTVGRIQLTLVKASQLP 423
>gi|444722668|gb|ELW63351.1| Poly(A) polymerase gamma [Tupaia chinensis]
Length = 554
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 54/88 (61%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR NP DR H MPIITPAY NS+Y
Sbjct: 203 LVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTY 262
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGK 89
VS T VM E+F+ R I + K
Sbjct: 263 NVSTSTRTVMVEEFKQVYRQANNINMLK 290
>gi|32527644|gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 483
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 20/221 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L++ FF + W+WP PV++ D + MPI P +
Sbjct: 224 LLANFFYTFALWQWPTPVVLLE-----------DTYPSTGAPPGLMPIQLPCGSHQYCNS 272
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
++ T + +F G+ + ++ W LFE YP+ Y + ++ + AA+ +DL
Sbjct: 273 TITRSTFYKIVAEFLLGHNLTKDYLKLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDL 332
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTSK 181
W GWV+SRFR L +KIE+ G+ C P P +Y++ PN F+WGL + + S
Sbjct: 333 SDWVGWVKSRFRCLLIKIEE-VYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRTINVS- 388
Query: 182 ECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLP 222
D + +F + +++ R I + V LP
Sbjct: 389 -----DIESVKIDFLKNVNSGSFRGTVGRIQLTLVKASQLP 424
>gi|340500382|gb|EGR27268.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 512
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 111/205 (54%), Gaps = 15/205 (7%)
Query: 2 LVSRFFRVYTQWRWPN-PVMMCPIEMGELGFSVWDPRKNPKDRS-HRMPIITPAYHCMNS 59
++ RFF +Y++W+W + V + I+ + + P+++ M IITP + C+N
Sbjct: 267 IIERFFFLYSRWKWHDMAVQIEYIQEDIYNQMICGNQWVPENKGISNMMIITPCFPCINC 326
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKA--EWSALFEHYPFFEAYENYLQVDIVAAD 117
+Y V+ TL+V+ EQFQ G RI +EI+ ++ ++ LF+ + FF+ Y +LQ+ I+A +
Sbjct: 327 AYNVTESTLRVIQEQFQYGYRILDEIQKNQSHYDYQDLFKPFEFFKRYNAFLQIRILAKN 386
Query: 118 ADDLLTWKGWVESRFRQLTLKIEQ-DTNGLLQCHPYPNKYID------PSKPCPNSAFFW 170
++ WKG VE R+LT IE + ++ HP+ +K+ID +F+
Sbjct: 387 KNEYFQWKGHVEINLRKLTKIIENGKLSKIILIHPF-SKFIDLCLKEQLGDYSLGCVYFY 445
Query: 171 GLSRKEVGTSKECQQFDFQGTVKNF 195
G+ K+ ++ Q F+ +K F
Sbjct: 446 GIKVKD---NQNDIQISFEEEIKKF 467
>gi|429964357|gb|ELA46355.1| hypothetical protein VCUG_02160 [Vavraia culicis 'floridensis']
Length = 708
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 69/113 (61%), Gaps = 4/113 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++ ++F +Y +W+WP PVM+ IE VWDP+ +P D+ H+MP+ITP+Y M S++
Sbjct: 418 MICKYFELYKEWKWPTPVMLKKIENLNYNLKVWDPKIHPSDKFHKMPVITPSYPSMCSTH 477
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIV 114
+ T++ E+ + G+R+ E GK EW F FF+ Y+++L V I+
Sbjct: 478 NIINSTMKRYKEELERGHRLLAE---GK-EWKEFFRSTDFFQRYKSFLAVFIL 526
>gi|255556450|ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative [Ricinus communis]
Length = 492
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 22/223 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+S FF Y W WP PVM+ + G S P ++ + MPI P
Sbjct: 236 LISNFFATYATWPWPTPVML------QDGMS--SPAEDFIETRSFMPIRLPCSPHEYCHS 287
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
++ T + +F G+ + +++ +W+ +FE +P+ + Y ++++ + A D D++
Sbjct: 288 NITKSTYYRIRTEFLRGHSLTKDLLKPDFDWNGIFEPFPYSKKYTRFVKIYLSAPDQDEV 347
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLL-QCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
W GWV+SRFR L LK+E GL QC P P +Y D PN F+WGL+
Sbjct: 348 GDWVGWVKSRFRALLLKLE----GLQGQCDPSPVEYADRDVSEPNVVFYWGLN------P 397
Query: 181 KECQQFDFQGTVKNFRRGI-DNYRVRREGRDIYFSYVCRRHLP 222
D + ++F R I Y R R + S V LP
Sbjct: 398 SRSNYIDLESVEEDFLRNIYSGYHGTR--RKLELSIVKAAELP 438
>gi|440493736|gb|ELQ76169.1| Poly(A) polymerase, nucleotidyltransferase [Trachipleistophora
hominis]
Length = 696
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 30/180 (16%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++ ++F +Y +W+WP PVM+ IE VWDP+ +P D+ H+MP+ITP+Y M S++
Sbjct: 429 IICKYFELYKEWKWPMPVMLKKIENLNYNLKVWDPKIHPSDKFHKMPVITPSYPSMCSTH 488
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADA--- 118
+ T++ E+ + +++ E AEW+ F FF+ Y ++L V I+ +A
Sbjct: 489 NIMNSTMKRYKEELERAHKLLVE----GAEWNEFFRGTDFFQRYRSFLAVFILLKNAGCT 544
Query: 119 --DDLLT--------------------WKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
+D + W+G V SR R L+ K+E L P+P +
Sbjct: 545 TNNDARSEQEITNEQASGAKETSMHKMWQGHVNSRIRFLSTKLET-VEQLDSAPPFPQTF 603
>gi|119620436|gb|EAX00031.1| poly(A) polymerase gamma, isoform CRA_c [Homo sapiens]
Length = 425
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 22/189 (11%)
Query: 47 MPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYE 106
MPIITPAY NS+Y VS T VM E+F+ G + +EI GK++WS L E FF+ Y
Sbjct: 1 MPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYR 60
Query: 107 NYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYP--------NK 155
+Y+ + A+ ++ L W G VES+ R L +E++ T + +P N
Sbjct: 61 HYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNN 120
Query: 156 YIDPSKPCPNSAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIY 212
Y+ S +F G+ + V ++ +D Q R +N + +EG I
Sbjct: 121 YV--------SMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIE 172
Query: 213 FSYVCRRHL 221
++V ++ L
Sbjct: 173 ATHVKKKQL 181
>gi|295664146|ref|XP_002792625.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278739|gb|EEH34305.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 590
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Query: 23 PIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRIC 82
PIE G L VW+P+ DR H MPIITPAY M +++ VSL T V+ + + G I
Sbjct: 248 PIEEGPLQMKVWNPKIYHGDRYHLMPIITPAYPSMCATHNVSLSTKAVLLRELKRGGDIV 307
Query: 83 EEIELGKAEWSALFEHYPFF-EAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQ 141
++I LG+ W+ LF + FF + Y+ YL + + + W G VES+ R L +++
Sbjct: 308 DKIFLGQLTWNDLFTRHTFFSQDYKYYLSITSSSRGKEAQSVWSGLVESKLRHLVGALDR 367
Query: 142 DTNGLLQCHPYPNKY 156
++ + HP+P +
Sbjct: 368 KSS-IEVAHPFPKGF 381
>gi|226479000|emb|CAX72995.1| poly (A) polymerase beta [Schistosoma japonicum]
Length = 704
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIE-MGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
M+V FF +++QW WP PV + E + L VWDPR NP D+ H MPI+TP+Y NS
Sbjct: 261 MIVYLFFTIFSQWPWPKPVRLRESEYIASLCLPVWDPRLNPSDQYHLMPILTPSYPSQNS 320
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
+Y V ++ + + G + + K WS LFE FF+ Y +Y+ V +V
Sbjct: 321 TYNVQRSNRIIIERELKQGLNVVRASMMHKRSWSNLFEAAFFFQ-YRHYVVVIVVGNVKH 379
Query: 120 DLLTWKGWVESRFRQLTLKIE 140
+ G VESR R L E
Sbjct: 380 TFIELCGLVESRLRVLVSNFE 400
>gi|222624807|gb|EEE58939.1| hypothetical protein OsJ_10608 [Oryza sativa Japonica Group]
Length = 519
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 19/226 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF +++ W WP PV + + W P MPI+ P +
Sbjct: 282 LFNSFFDIFSHWHWPLPVSLLDQP------TPWRPHC-----CSFMPIVMPCSPPEFCAS 330
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
++ T + E+ Q G + + G W+ LF +P+ Y+++L++ + A A++L
Sbjct: 331 SITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEEL 390
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS-RKEVGTS 180
W GWV+SRFR L LK+E + C P P++ D S PN FFWGL R
Sbjct: 391 RDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHSMIEPNVVFFWGLMYRTSTNIC 447
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 226
+ + DF +V N G + + DI S V HLP V+
Sbjct: 448 IDSVKEDFMKSVTNDIYG----KEKCTHSDITMSIVWPTHLPKCVY 489
>gi|215768734|dbj|BAH00963.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 546
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 19/226 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF +++ W WP PV + + W P MPI+ P +
Sbjct: 309 LFNSFFDIFSHWHWPLPVSLLDQP------TPWRPHC-----CSFMPIVMPCSPPEFCAS 357
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
++ T + E+ Q G + + G W+ LF +P+ Y+++L++ + A A++L
Sbjct: 358 SITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEEL 417
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS-RKEVGTS 180
W GWV+SRFR L LK+E + C P P++ D S PN FFWGL R
Sbjct: 418 RDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHSMIEPNVVFFWGLMYRTSTNIC 474
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 226
+ + DF +V N G + + DI S V HLP V+
Sbjct: 475 IDSVKEDFMKSVTNDIYG----KEKCTHSDITMSIVWPTHLPKCVY 516
>gi|58220771|gb|AAW68017.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 431
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 19/226 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF +++ W WP PV + + W P MPI+ P +
Sbjct: 194 LFNSFFDIFSHWHWPLPVSLLDQP------TPWRPHC-----CSFMPIVMPCSPPEFCAS 242
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
++ T + E+ Q G + + G W+ LF +P+ Y+++L++ + A A++L
Sbjct: 243 SITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEEL 302
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS-RKEVGTS 180
W GWV+SRFR L LK+E + C P P++ D S PN FFWGL R
Sbjct: 303 RDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHSMIEPNVVFFWGLMYRTSTNIC 359
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 226
+ + DF +V N G + + DI S V HLP V+
Sbjct: 360 IDSVKEDFMKSVTNDIYG----KEKCTHSDITMSIVWPTHLPKCVY 401
>gi|297722067|ref|NP_001173397.1| Os03g0313200 [Oryza sativa Japonica Group]
gi|255674459|dbj|BAH92125.1| Os03g0313200 [Oryza sativa Japonica Group]
Length = 431
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 19/226 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF +++ W WP PV + + W P MPI+ P +
Sbjct: 194 LFNSFFDIFSHWHWPLPVSLLDQP------TPWRPHC-----CSFMPIVMPCSPPEFCAS 242
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
++ T + E+ Q G + + G W+ LF +P+ Y+++L++ + A A++L
Sbjct: 243 SITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEEL 302
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS-RKEVGTS 180
W GWV+SRFR L LK+E + C P P++ D S PN FFWGL R
Sbjct: 303 RDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHSMIEPNVVFFWGLMYRTSTNIC 359
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 226
+ + DF +V N G + + DI S V HLP V+
Sbjct: 360 IDSVKEDFMKSVTNDIYG----KEKCTHSDITMSIVWPTHLPKCVY 401
>gi|218192685|gb|EEC75112.1| hypothetical protein OsI_11288 [Oryza sativa Indica Group]
Length = 519
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 103/227 (45%), Gaps = 21/227 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWD-PRKNPKDRSHRMPIITPAYHCMNSS 60
L + FF +++ W WP PV S++D P MPI+ P +
Sbjct: 282 LFNSFFDIFSHWHWPLPV------------SLFDQPTPWRPHCCSFMPIVMPCSPPEFCA 329
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
++ T + E+ Q G + + G W+ LF +P+ Y+++L++ + A A++
Sbjct: 330 SSITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVRYKHFLRIVLSAPVAEE 389
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS-RKEVGT 179
L W GWV+SRFR L LK+E + C P P++ D S PN FFWGL R
Sbjct: 390 LRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHSMIEPNVVFFWGLMYRTSTNI 446
Query: 180 SKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 226
+ + DF +V N G + + DI S V HLP V+
Sbjct: 447 CIDSVKEDFMKSVTNDIYG----KEKCTHSDITMSIVWPTHLPKCVY 489
>gi|441666296|ref|XP_003275413.2| PREDICTED: poly(A) polymerase alpha [Nomascus leucogenys]
Length = 432
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 87/181 (48%), Gaps = 6/181 (3%)
Query: 47 MPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYE 106
MPIITPAY NS+Y VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y+
Sbjct: 1 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYK 60
Query: 107 NYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPC 163
+Y+ + A L W G VES+ R L +E++ T + +P +P K
Sbjct: 61 HYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE 120
Query: 164 PNSAFFWGLSRKEVGTSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRH 220
+ + GL K+ S+ +D Q R N ++ I +V R+
Sbjct: 121 FRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQ 180
Query: 221 L 221
L
Sbjct: 181 L 181
>gi|357115984|ref|XP_003559765.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 554
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 116/253 (45%), Gaps = 30/253 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPII---TPAYHCMN 58
L + FF ++ W W PV + G+ P + + MPI+ TP CM+
Sbjct: 320 LFTMFFEIFAHWDWQIPVNL----HGQ-------PTNCKRSDGYYMPIVMPCTPPELCMS 368
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADA 118
+ K T + + E+ G + +++ EW+ LF +P+ Y+ +L++ + + +
Sbjct: 369 NMTKC---TFKKIREELMRGYALTKDLWRHDFEWTWLFAPFPYATRYQQFLRIALCSPTS 425
Query: 119 DDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
++L W GWV+SRFRQL LK+E+ NG L+C PY ++ +D PN + WGL
Sbjct: 426 EELRDWTGWVKSRFRQLILKLER--NG-LECDPYSSEEVDHRVIKPNIMYHWGL------ 476
Query: 179 TSKECQQFDFQGTVKNFRRGIDN---YRVRREGRDIYFSYVCRRHLPSFVFPD-GYKWHR 234
S+ D ++F + I N +V+ ++ S V LP ++ D Y +
Sbjct: 477 ISEANTYLDISSLREDFMKDIINDVYGKVKCRRSELTLSVVGSSQLPKSMYSDSAYLGYM 536
Query: 235 PSRHFNEQSGKPC 247
P Q C
Sbjct: 537 PQYMVGYQPAPDC 549
>gi|297829196|ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
gi|297328320|gb|EFH58739.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
Length = 507
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 20/221 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L++ FF ++ W+WP PV++ D MPI P +
Sbjct: 250 LLANFFYIFAHWQWPTPVVLLE-----------DTYPATGAPPGLMPIQLPCGSHQYCNS 298
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
++ T + +F G+ + ++ W LFE YP+ Y + ++ + AA+ +DL
Sbjct: 299 NITRSTFYKIMAEFLRGHNLTKDYLKPNFSWKNLFELYPYENTYTWFTKIHLSAANQEDL 358
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTSK 181
W GWV+SRFR L KIE+ G+ C P P +Y++ PN F+WGL + + S
Sbjct: 359 SDWVGWVKSRFRCLLSKIEE-VYGI--CDPNPTEYVETYTKQPNIVFYWGLQLRTINVS- 414
Query: 182 ECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLP 222
D + F + +++ + I S V LP
Sbjct: 415 -----DIESVETEFLKNLNSGSFQGPVGRIQLSVVKESQLP 450
>gi|323453660|gb|EGB09531.1| hypothetical protein AURANDRAFT_24142, partial [Aureococcus
anophagefferens]
Length = 402
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 89/180 (49%), Gaps = 28/180 (15%)
Query: 2 LVSRFFRVYTQWRWPNPVMMC-PIEMGELGFSVWDPRKNP--------KDRSHRMPIITP 52
L+ +FF ++ +W WP P ++C P++ G GF VW R++ MPI+TP
Sbjct: 224 LLCKFFAIFAKWDWPAPAILCRPLDHG-YGFEVWGQNAEQLRGRMAYHNLRNNLMPIVTP 282
Query: 53 AYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEI---------------ELGKAEWSALFE 97
AY MNS+ V+ + V+ ++F G +C+ I ++G W L E
Sbjct: 283 AYPAMNSAANVNPWSFAVLRDEFARGAEVCKRIVARHAELAENGAVDPDVGGPLWDELVE 342
Query: 98 HYPFFEAYENYLQVDIVA-ADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
FF+ Y+ YL V+++ + +D +KG++ SR R+L K+ L H +P +Y
Sbjct: 343 KTDFFDKYDAYLAVNVLGDGEKEDFDNFKGFLSSRLRKLVEKMGHLP--LKMIHLFPKEY 400
>gi|413955904|gb|AFW88553.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
Length = 508
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 18/196 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRK--NPKDRSHRMPIITPAYHCMNS 59
L+S FF ++ W WP PV S+ DP D MPI+ P
Sbjct: 300 LLSLFFDIFVHWPWPLPV------------SLLDPPVLCGGPDGCSLMPIMLPCIPPEFC 347
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
S + T + E+ + G + ++ ++WS LF +P+ Y+ +L++ + A D
Sbjct: 348 SSSTTESTFSKIKEELRRGYALSKDTRSTDSDWSWLFAPFPYGARYKCFLRIVLSAPMED 407
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS-RKEVG 178
+L W GWV+SRFR L LK+E + C P P+K +D + PN FFWGL R+ +
Sbjct: 408 ELRDWVGWVKSRFRNLLLKLESLG---VYCDPDPSKQVDHTITDPNVVFFWGLIYRRSIQ 464
Query: 179 TSKECQQFDFQGTVKN 194
+ DF +V N
Sbjct: 465 ICTNSLKEDFMKSVCN 480
>gi|378756776|gb|EHY66800.1| poly(A) polymerase [Nematocida sp. 1 ERTm2]
Length = 507
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 88/186 (47%), Gaps = 16/186 (8%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYK 62
+ +FF V+++W WP PV++ + VW+P+ N ++ +MP+ITP Y + S++
Sbjct: 241 IEKFFEVFSKWAWPQPVIIKEVPDCNYNLKVWNPKVNVHHKNDKMPVITPVYPPLCSTHN 300
Query: 63 VSLGTLQVMTEQFQCGNRICEEIELGKAE----WSALFEHYPFFEAYENYLQVDIVAADA 118
++ TL VM +FQ G I E K E L E FF ++ Y + + ++
Sbjct: 301 ITTSTLFVMKREFQRGTAIFAESLQNKTEPFKVLDELCEDTDFFTRHKTYFMIAMACDNS 360
Query: 119 DDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
+ + G+ E+R R K+E N I+ + P + G+++KEV
Sbjct: 361 KEFGRFMGFAETRVRMFAQKLESIEN------------IEYAYTLPKNYHLEGVTQKEVP 408
Query: 179 TSKECQ 184
K+ Q
Sbjct: 409 LLKDLQ 414
>gi|358333281|dbj|GAA51822.1| poly(A) polymerase [Clonorchis sinensis]
Length = 426
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG-ELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
LV FF + W WP+PV + I+ +L WDP++N +D MPI+TP + N++
Sbjct: 191 LVYTFFAQFASWPWPHPVQIASIKFASDLNIFSWDPQRNAQDGRDLMPILTPVFPNKNAA 250
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
+ V T +++T++ I ++ G W LFE Y + + ++L + + ++
Sbjct: 251 FTVRQATRKIVTDELIRARDIVSDVLRGSGTWEKLFERYDLRDDHRHFLLLTLQTTSKEE 310
Query: 121 LLTWKGWVESRFRQLTLKIEQD 142
L+ G ++SR R L +E +
Sbjct: 311 LVVVGGLIDSRLRDLAQALEDE 332
>gi|348667211|gb|EGZ07037.1| hypothetical protein PHYSODRAFT_307061 [Phytophthora sojae]
Length = 1061
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 5 RFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYKVS 64
RFF+V ++W+WP PVM+ I LGF +WDPR++ DRSH MPIITPAY MNSS +VS
Sbjct: 699 RFFQVLSEWQWPQPVMLNMIYDAGLGFDMWDPRQSVFDRSHIMPIITPAYPHMNSSVQVS 758
Query: 65 LGTLQVMTEQFQCGNRICEEIELG 88
T V+ E+ R EI +G
Sbjct: 759 QPTFSVIYEELWRA-RYLAEIAVG 781
>gi|123495483|ref|XP_001326753.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909672|gb|EAY14530.1| hypothetical protein TVAG_388620 [Trichomonas vaginalis G3]
Length = 494
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 13/233 (5%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++ FF W WP P+ + G S WDP + +D MPIITPAY +NS +
Sbjct: 254 IIVMFFNDLATWTWPEPIYINTPTTGNR--SNWDPTRQ-QDHKDCMPIITPAYPTINSLH 310
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
+ + MT +F+ G ++ +A W + + FF + +++V +VA +
Sbjct: 311 SATKSSRNRMTVEFKRGFKVASACLKSEASWERIIDSPKFFVRHRKFVEVLVVATEEKVY 370
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN----SAFFWGLSRKEV 177
+ +V+SR R L + IE + + +P ++ P+ S F+ GLS
Sbjct: 371 TEFMKFVQSRVRFLAINIETQLRHVSHAYIWPVEF--PANGYRGNEFCSVFYIGLSYHVP 428
Query: 178 GTSKECQQFDFQGTVKNFRRGIDNYRVRR-EGRDIYFSYVCRRHLPSFVFPDG 229
+ + D K + +D+ R + D+ V + LPSF+FP+G
Sbjct: 429 KDENQSRTLDLTSPAKKW---VDDIRQKAPPNADVILDVVDTKDLPSFLFPNG 478
>gi|325184553|emb|CCA19046.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 799
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 6 FFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYKVSL 65
FF V ++W+WP P+M+ +LG W + +DR+H MPIITPAY MNSS +V+
Sbjct: 503 FFYVLSEWQWPKPIMLNIPYDAKLGLECWSFQL--RDRTHVMPIITPAYPQMNSSAQVTA 560
Query: 66 GTLQVMTEQFQCGNRICE-EI---------------ELGKAE---------WSALFEHYP 100
TL V+ E+ + E EI E G E W L++
Sbjct: 561 STLSVIKEELWRARDLLEREILSSITSHQQDQRTRKEAGALEKPDTDTFLSWDVLYQPSS 620
Query: 101 FFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPS 160
FF Y+ Y+ + I D+ +L W+ +V SR +L +K+ QD + H YP ++ +
Sbjct: 621 FFVRYDWYVGLTI-QIDSSELGRWETFVCSRLHKL-VKMLQDLPMIDLVHGYPQFLVNKA 678
Query: 161 KPCPNSAFFWGLSRKE------VGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFS 214
S+ F GL R+ + + F ++ + ++ R + + +
Sbjct: 679 ----GSSLFLGLKRRSEDDEEFLSSVNRTISFFIATDLQQNAQSSESPAKRMQTTAVLLN 734
Query: 215 YVCRRHLPSFVFPDGYKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQLKR 264
+ LP FVF +G +R ++Q K M + +++ + +R
Sbjct: 735 W---DDLPDFVFENGNADALQNREHDDQHLKQLSLTCMGSTSNAQHKSRR 781
>gi|108707804|gb|ABF95599.1| Poly polymerase central domain containing protein, expressed [Oryza
sativa Japonica Group]
Length = 550
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 104/234 (44%), Gaps = 27/234 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF +++ W WP PV + + W P MPI+ P +
Sbjct: 305 LFNSFFDIFSHWHWPLPVSLLDQP------TPWRPHC-----CSFMPIVMPCSPPEFCAS 353
Query: 62 KVSLGTLQVMTEQFQCGNRICE----EIELGK----AEWSALFEHYPFFEAYENYLQVDI 113
++ T + E+ Q G + + +E G W+ LF +P+ Y+++L++ +
Sbjct: 354 SITRSTFNKIKEELQRGFALTKLGVCTVEQGDRNGDINWTELFAPFPYTVRYKHFLRIVL 413
Query: 114 VAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 173
A A++L W GWV+SRFR L LK+E + C P P++ D S PN FFWGL
Sbjct: 414 SAPVAEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHSMIEPNVVFFWGLM 470
Query: 174 -RKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 226
R + + DF +V N G + + DI S V HLP V+
Sbjct: 471 YRTSTNICIDSVKEDFMKSVTNDIYG----KEKCTHSDITMSIVWPTHLPKCVY 520
>gi|414888171|tpg|DAA64185.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 545
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF+ + W W PV + EL + MPI+ P +
Sbjct: 318 LFAVFFQTFAHWPWQVPVSL----HDELTTCL-------HSEGRLMPIVMPCTPPEFCAS 366
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V+ G+L+ + E+ G + + +WS LFE +P+ + Y+ +L++ + A +L
Sbjct: 367 TVTKGSLKKIREELTRGYVLTRDPLRHDFQWSWLFEPFPYDQKYQQFLRIALRAPTIAEL 426
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGL-SRKEVGTS 180
W GWV+SRFR L LK+E+ ++C P P++ +D + PN F+WGL ++ +
Sbjct: 427 GDWAGWVKSRFRFLILKLERAG---IECDPCPSEEVDHTDNDPNVVFYWGLIPKRIIQVD 483
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLP----SFVFP--------D 228
+ DF + N G V+ D+ S V LP S V+P D
Sbjct: 484 TSSLKGDFMEDLTNDVYG----TVKCTHSDVTISVVGLPQLPKSMCSRVYPPAVHAALYD 539
Query: 229 GYKWHR 234
G + HR
Sbjct: 540 GLRGHR 545
>gi|226498102|ref|NP_001142239.1| uncharacterized protein LOC100274408 [Zea mays]
gi|194707762|gb|ACF87965.1| unknown [Zea mays]
Length = 430
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF+ + W W PV + EL + MPI+ P +
Sbjct: 203 LFAVFFQTFAHWPWQVPVSL----HDELTTCL-------HSEGRLMPIVMPCTPLEFCAS 251
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V+ G+L+ + E+ G + + +WS LFE +P+ + Y+ +L++ + A +L
Sbjct: 252 TVTKGSLKKIREELTRGYVLTRDPLRHDFQWSWLFEPFPYDQKYQQFLRIALRAPTIAEL 311
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGL-SRKEVGTS 180
W GWV+SRFR L LK+E+ ++C P P++ +D + PN F+WGL ++ +
Sbjct: 312 GDWAGWVKSRFRFLILKLERAG---IECDPCPSEEVDHTDNDPNVVFYWGLIPKRIIQVD 368
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLP----SFVFP--------D 228
+ DF + N G V+ D+ S V LP S V+P D
Sbjct: 369 TSSLKGDFMEDLTNDVYG----TVKCTHSDVTISVVGLPQLPKSMCSRVYPPAVHAALYD 424
Query: 229 GYKWHR 234
G + HR
Sbjct: 425 GLRGHR 430
>gi|397621901|gb|EJK66507.1| hypothetical protein THAOC_12570 [Thalassiosira oceanica]
Length = 756
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 105/240 (43%), Gaps = 25/240 (10%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYK 62
+ +FF V+ WRWPNPVM+ ELG VW+ + R P+ITPAY MNS+
Sbjct: 231 LRKFFLVFKSWRWPNPVMLTRPHDAELGLQVWNSHQAANMR-QVAPMITPAYPAMNSTLS 289
Query: 63 VSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLL 122
VS TLQ++ E+F G+ I ++ L++ Y ++ I D
Sbjct: 290 VSRQTLQILHEEFCRGHGIVDK----------LYKDYQRGRDRPGG-RLCITGPTLHDAQ 338
Query: 123 TWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY----------IDPSKPCPNSAFFWGL 172
W G+VESR R+L + + L + +P K+ + ++ + +F G
Sbjct: 339 AWAGFVESRLRKLVSDMLGRSLPLSKIQLWPKKFDVCCADKTALLTHAQRANSITYFIGF 398
Query: 173 SRKEVGTSKECQQFDFQGTVKNFRR-GIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYK 231
++ E Q D + + NFR+ + + G DI + LP+ F Y+
Sbjct: 399 RVDKLRMRGE--QLDIERQLSNFRKFELGRFHPLVPGMDILPKSFGVKELPTICFDGTYE 456
>gi|414888168|tpg|DAA64182.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 430
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF+ + W W PV + EL + MPI+ P +
Sbjct: 203 LFAVFFQTFAHWPWQVPVSL----HDELTTCL-------HSEGRLMPIVMPCTPPEFCAS 251
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V+ G+L+ + E+ G + + +WS LFE +P+ + Y+ +L++ + A +L
Sbjct: 252 TVTKGSLKKIREELTRGYVLTRDPLRHDFQWSWLFEPFPYDQKYQQFLRIALRAPTIAEL 311
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGL-SRKEVGTS 180
W GWV+SRFR L LK+E+ ++C P P++ +D + PN F+WGL ++ +
Sbjct: 312 GDWAGWVKSRFRFLILKLERAG---IECDPCPSEEVDHTDNDPNVVFYWGLIPKRIIQVD 368
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLP----SFVFP--------D 228
+ DF + N G V+ D+ S V LP S V+P D
Sbjct: 369 TSSLKGDFMEDLTNDVYG----TVKCTHSDVTISVVGLPQLPKSMCSRVYPPAVHAALYD 424
Query: 229 GYKWHR 234
G + HR
Sbjct: 425 GLRGHR 430
>gi|414888166|tpg|DAA64180.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888167|tpg|DAA64181.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 265
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF+ + W W PV + EL + MPI+ P +
Sbjct: 38 LFAVFFQTFAHWPWQVPVSL----HDELTTCL-------HSEGRLMPIVMPCTPPEFCAS 86
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
V+ G+L+ + E+ G + + +WS LFE +P+ + Y+ +L++ + A +L
Sbjct: 87 TVTKGSLKKIREELTRGYVLTRDPLRHDFQWSWLFEPFPYDQKYQQFLRIALRAPTIAEL 146
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGL-SRKEVGTS 180
W GWV+SRFR L LK+E+ ++C P P++ +D + PN F+WGL ++ +
Sbjct: 147 GDWAGWVKSRFRFLILKLERAG---IECDPCPSEEVDHTDNDPNVVFYWGLIPKRIIQVD 203
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLP----SFVFP--------D 228
+ DF + N G V+ D+ S V LP S V+P D
Sbjct: 204 TSSLKGDFMEDLTNDVYG----TVKCTHSDVTISVVGLPQLPKSMCSRVYPPAVHAALYD 259
Query: 229 GYKWHR 234
G + HR
Sbjct: 260 GLRGHR 265
>gi|226492962|ref|NP_001152292.1| LOC100285931 [Zea mays]
gi|195654767|gb|ACG46851.1| poly [Zea mays]
gi|238006566|gb|ACR34318.1| unknown [Zea mays]
gi|414866508|tpg|DAA45065.1| TPA: poly [Zea mays]
Length = 535
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 102/228 (44%), Gaps = 22/228 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMC--PIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
L+S FF ++ W WP PV + P+ P + P D MPI+ P
Sbjct: 300 LLSLFFDIFVHWPWPLPVSLLDPPV-----------PCRGP-DGCSLMPIMLPCIPPEFC 347
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
S + T + E+ G + ++ WS LF +P+ Y+ +L++ + A +
Sbjct: 348 SSSTTESTFSKIKEELWRGYALSKDTRSTDFNWSWLFAPFPYGARYKCFLRIVLSAPMGE 407
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS-RKEVG 178
+L W GWV+SRFR L LK+E + C P P++ +D + PN FFWGL R+ +
Sbjct: 408 ELRDWVGWVKSRFRNLLLKLESLG---VYCDPDPSEQVDHTITDPNVVFFWGLIYRRNIQ 464
Query: 179 TSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 226
+ DF +V N G + + DI S V LP VF
Sbjct: 465 ICISSLKEDFMKSVCNNIYG----KEKCAHSDITMSIVGPPQLPKSVF 508
>gi|428177976|gb|EKX46853.1| hypothetical protein GUITHDRAFT_162826 [Guillardia theta CCMP2712]
Length = 572
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 25/251 (9%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGEL-------GFSVWDPRKNPKDRSHRMPIITPA 53
+L+ +FF +Y W++ + +++ P E + WDP + R + +ITP
Sbjct: 273 LLLEKFFHLYKHWKFEDAIIVAPPEECQAPDGQERYNLHAWDPTRRHFSR-RPLTVITPT 331
Query: 54 YHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDI 113
Y NS++ V+ L V+ + N + + + G++ ++ LFE FF+ Y ++Q+++
Sbjct: 332 YPMDNSTFNVTDSALNVIRNEISRANSLTQGLAQGESSYNDLFEPAMFFKQYGTFVQIEV 391
Query: 114 VAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCH-------PYPNKYI---DPSK-P 162
+ ++ + + G+VES+ R+L K+ GL H P P +++ DP P
Sbjct: 392 LGSE-KHIEAFSGYVESQIRKLVEKLTTSQLGLYIVHPCTRHFGPIPAEHLGGGDPEDGP 450
Query: 163 CPNSAFFWGLSRKEVGT---SKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRR 219
N F+ GL + Q DF VK F GI + I V RR
Sbjct: 451 WQNIFFYLGLKFDDNLVRHMKASGQSVDFTQPVKEFLLGI--HITDPTQTSISIKVVKRR 508
Query: 220 HLPSFVFPDGY 230
LP +V + Y
Sbjct: 509 ALPEWVKKEYY 519
>gi|224099105|ref|XP_002311376.1| predicted protein [Populus trichocarpa]
gi|222851196|gb|EEE88743.1| predicted protein [Populus trichocarpa]
Length = 483
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 13/175 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+S FF Y W WP PVM+ + G S ++ + MPI P
Sbjct: 224 LISNFFSTYAMWPWPTPVML------QDGMS--SNVEDVIETRFYMPIRLPCSPYEYCHS 275
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGK--AEWSALFEHYPFFEAYENYLQVDIVAADAD 119
V+ T + +F G+ + ++ K ++ +FE +P+ Y ++++ + A D D
Sbjct: 276 NVTKSTFTKIRAEFLRGHSMTRDLLKLKLDSDVGRIFEPFPYSTNYTRFVKIYLSAPDQD 335
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSR 174
+L W GWV+S FR L LK+E G C P P +Y+D PN F+WGL+R
Sbjct: 336 ELGDWVGWVKSHFRCLLLKLEA-VQGF--CDPNPMEYVDMDASEPNVVFYWGLNR 387
>gi|428168831|gb|EKX37771.1| hypothetical protein GUITHDRAFT_158559 [Guillardia theta CCMP2712]
Length = 338
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMG--ELGFSVWD-PRKNPKDRSHRMPIITPAYHCMN 58
L+ FF Y+QW+WP PV + + +L VW DR H MPIITP Y N
Sbjct: 224 LLYFFFFTYSQWKWPQPVGLTEVIANSHDLNLPVWGFGATEMSDRRHLMPIITPCYPAQN 283
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHY-PFFEA 104
++ VS TL+VM E+F IC++I G AEWS LFE PF +A
Sbjct: 284 ATANVSKSTLKVMQEEFTRAKDICKQILEGNAEWSDLFEPLDPFSKA 330
>gi|170061473|ref|XP_001866247.1| poly a polymerase [Culex quinquefasciatus]
gi|167879711|gb|EDS43094.1| poly a polymerase [Culex quinquefasciatus]
Length = 554
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYK 62
V + F V+++W+ LGF +WDPR N + + H M IITPAY NS++
Sbjct: 416 VHKCFLVFSRWKLRQ----------NLGFQLWDPRVNVQGQFHLMSIITPAYPQQNSTFH 465
Query: 63 VSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLL 122
VS T +VM +F G +I +EI L KA W L + + + + DD L
Sbjct: 466 VSRSTRKVMLNEFNRGMQITDEIMLDKAGWDKLIATLSY--------STLVTSNNTDDHL 517
Query: 123 TWKGWVESRFRQLTLKIEQ 141
W G VES+ R L +E+
Sbjct: 518 EWCGLVESKIRYLIQNLER 536
>gi|294888316|ref|XP_002772423.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239876612|gb|EER04239.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 113
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 56/84 (66%), Gaps = 4/84 (4%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI----EMGELGFSVWDPRKNPKDRSHRMPIITPAYHCM 57
LV RFF + ++W W NPV +CPI E+G + F VW+P++ DRSH MP+ITPA+ M
Sbjct: 26 LVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPKQYASDRSHLMPVITPAFPSM 85
Query: 58 NSSYKVSLGTLQVMTEQFQCGNRI 81
NS+Y V+ T +++ + + +++
Sbjct: 86 NSTYNVTETTKRIIMGEIERAHKL 109
>gi|340506959|gb|EGR32994.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 502
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 100/185 (54%), Gaps = 19/185 (10%)
Query: 2 LVSRFFRVYTQWRWPN-PV----MMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ RFF +Y++WRW + PV ++ + +L W P + M IITP + C
Sbjct: 268 LLERFFFLYSRWRWQDFPVQVEYIVDDVANSKLSADQWRP-----EYKSSMMIITPCFPC 322
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 116
MN ++ VS TL+++ EQ G +I+ G +S LF+ + FF+ Y+++L++ I+A
Sbjct: 323 MNCAHNVSSTTLRIIQEQLWHGYETICKIQNGSKNYSDLFKSFKFFKKYKHFLEIKILAT 382
Query: 117 DADDLLTWKGWVESRFRQLTLKIEQ-DTNGLLQCHPYPN---KYIDPSKPCPNS-----A 167
+ +D WKG VES R+LT E LL+ HPYP+ ++D ++ N
Sbjct: 383 NKNDYTVWKGHVESGLRKLTRLFESPQYMNLLEVHPYPSYIENFLDDTQSQKNKYKFQCK 442
Query: 168 FFWGL 172
+++GL
Sbjct: 443 YYYGL 447
>gi|387594343|gb|EIJ89367.1| poly(A) polymerase [Nematocida parisii ERTm3]
gi|387596813|gb|EIJ94434.1| poly(A) polymerase [Nematocida parisii ERTm1]
Length = 506
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 4/158 (2%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYK 62
+ +FF V+++W WP PV++ + VW+P+ NP+ ++ +MP+ITP Y + S++
Sbjct: 241 IEKFFDVFSKWPWPQPVIIKEVPDCNYNLKVWNPKINPQHKNDKMPVITPVYPPLCSTHN 300
Query: 63 VSLGTLQVMTEQFQCGNRICEEIELGKAEWSA---LFEHYPFFEAYENYLQVDIVAADAD 119
++ TL V ++F G I E K L E FF ++ Y + + +
Sbjct: 301 ITNSTLFVAKKEFLRGVAIFSENADKKDPMKILDQLCEDADFFTRHKTYFMIALACDNPK 360
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYI 157
+ + G+ E+R R K+E N + + +P KYI
Sbjct: 361 EFSRFMGFAETRVRMFAQKLENIEN-IEYAYTFPKKYI 397
>gi|326437024|gb|EGD82594.1| hypothetical protein PTSG_03248 [Salpingoeca sp. ATCC 50818]
Length = 840
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 93/216 (43%), Gaps = 24/216 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIE-MGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
LV +FF Y +W W PV + +E +G W P N D S M I+TP Y N+S
Sbjct: 249 LVEKFFWHYKRWDWAIPVELQHVEDLGITHIPHWSPINNYHDMS-VMKILTPVYPSQNAS 307
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
Y V+ TL + + + ++I GKA W L++ PFF Y +Y+ V + D
Sbjct: 308 YTVTRSTLYRIKRELDRAESVVQKIADGKATWPRLWKQIPFFGVYSHYICVQALTNSEQD 367
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY-----IDPS---------KP---C 163
++G VES R L +E + P P + DPS +P C
Sbjct: 368 RTLYEGLVESTVRNLVTSLEFHP-AVTYAIPIPKAFRRSPEKDPSTLEDEDTHERPPEYC 426
Query: 164 PNSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGI 199
+ +F GL V K +Q D + +F R +
Sbjct: 427 WRTLWFIGL----VFDPKATEQLDILTVMSDFERRV 458
>gi|294948940|ref|XP_002785971.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900079|gb|EER17767.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 505
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 87/211 (41%), Gaps = 26/211 (12%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V RFF VY +W+W + G S R+ DR H MP+ITP + N++Y
Sbjct: 277 IVERFFFVYARWQW--------TATRDYGNSNVPLRRYTSDRHHVMPVITPIFPTHNTTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAE---------WSALFEHYPFFEAYENYLQVD 112
V +V+ + + G I E + + K+ W+ L +PFF+ Y +L ++
Sbjct: 329 NVQESNKRVIVREIKRGREIMELMSMNKSSGATKGNEVTWADLCAPFPFFQVYRQFLLLE 388
Query: 113 IVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY---------IDPSKPC 163
I A L +KG VESR R L +E + P+P + I P
Sbjct: 389 ISAETEKAFLKFKGLVESRIRVLVKNLETCCGHKVLPQPHPVMFPRGPLGADAIPGEAPT 448
Query: 164 PNSAFFWGLSRKEVGTSKECQQFDFQGTVKN 194
AF G++ + T + +K
Sbjct: 449 FLGAFVLGITFDHIATDDLAASAEVSKEIKT 479
>gi|391331065|ref|XP_003739971.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 493
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++++FF V +QWRWP PVM+ P G + +W + P D MPIITP Y NSS+
Sbjct: 267 ILNKFFLVMSQWRWPEPVMLLPEGYG-VSSQLWSITQMPWDI---MPIITPVYPQQNSSF 322
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENY--LQVDIVAADAD 119
VS TL VM G RI ++I + + +W + F + YE+Y LQ D
Sbjct: 323 NVSKSTLLVMKNALTEGVRITDDILMERCDWKSFFHPVHIADMYEHYVVLQTFRYTTDPH 382
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPS 160
+ W VE ++ NG+ C KY+ S
Sbjct: 383 EKELWIMSVERSMKKF-------LNGIDACARCAIKYLHVS 416
>gi|294948934|ref|XP_002785968.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900076|gb|EER17764.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 436
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+V RFF VY +W+W + G S R+ DR H MP+ITP + N++Y
Sbjct: 277 IVERFFFVYARWQW--------TATRDYGNSNAPRRRYTSDRHHVMPVITPIFPTHNTTY 328
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAE---------WSALFEHYPFFEAYENYLQVD 112
V +V+ + + G I E + + K+ W+ L +PFF+ Y +L ++
Sbjct: 329 NVQESNKRVIVREIKRGREIMELMSMNKSSGATKGNEVTWADLCAPFPFFQVYRQFLLLE 388
Query: 113 IVAADADDLLTWKGWVESRFRQLTLKIE 140
I A L +KG VESR R L +E
Sbjct: 389 ISAETEKAFLKFKGLVESRIRVLVKNLE 416
>gi|242035935|ref|XP_002465362.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
gi|241919216|gb|EER92360.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
Length = 589
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 102/229 (44%), Gaps = 24/229 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPR---KNPKDRSHRMPIITPAYHCMN 58
L+S FF ++ W WP PV S+ DP + P D MPI+ P
Sbjct: 354 LLSLFFDIFAHWPWPLPV------------SLLDPPVLCRGP-DGCSLMPIMLPCNPPEF 400
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADA 118
S + T + E+ + G + ++ +WS LF +P+ Y+ +L++ + A
Sbjct: 401 CSSSTTESTFSKIKEELRRGYALTKDTRSTDFDWSWLFASFPYGARYKCFLRIVLSAPLD 460
Query: 119 DDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS-RKEV 177
++L W GWV+SRFR L LK+E + C P ++ +D + PN FFWGL + +
Sbjct: 461 EELRDWVGWVKSRFRNLLLKLESLG---VYCDPDSSEQVDHTITEPNVVFFWGLVFTRNI 517
Query: 178 GTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 226
+ DF +V N G + + DI + V LP +F
Sbjct: 518 QICTSSLKEDFMKSVCNNIYG----KEKCAHSDITMAIVGPPQLPKSIF 562
>gi|219124076|ref|XP_002182338.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406299|gb|EEC46239.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 777
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 102/251 (40%), Gaps = 32/251 (12%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGEL-----GFSV---WDPRKNPKDRSHRMPIITPAY 54
V FF + W+WP PV + + + G +V W+P + +D H PI+TPAY
Sbjct: 399 VQLFFETFANWKWPTPVSLIDLNDASITTPPPGAAVLPSWNPAIHIRDGLHVCPILTPAY 458
Query: 55 HCMNSSYKVSLGTLQVMTEQFQ-CGNRICEEIELG------------KAEWSALFE-HYP 100
MNSSY V+L L+ MTE Q ++I ++ K W L+ +
Sbjct: 459 PVMNSSYNVALPQLRRMTEALQYTAHKIARWVDRSHTTYNRGVPVRRKIPWHRLWSLNAG 518
Query: 101 FFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTN-----GLLQCHPYPNK 155
+ +++Y+ I A + +TW VESR R L +E + G P
Sbjct: 519 WVFRHQHYVHATIRAPQGEAFVTWFRLVESRLRVLISSLETPDSHAWPHGRFFYRNVPIA 578
Query: 156 YIDPSKPCPNSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSY 215
D + FF GL + D + +F R ++ + R D+ +
Sbjct: 579 PYDELNGLREAHFFIGLR-----FASHVDTADVRTLTLDFLRQVNGWIGRDSSMDLSLGH 633
Query: 216 VCRRHLPSFVF 226
V +LP FV
Sbjct: 634 VTLPNLPRFVL 644
>gi|326508888|dbj|BAJ86837.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 27/234 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHR----MPIITPAYHCM 57
L + FF ++ W W PV D P + H MPI+ P
Sbjct: 305 LFTMFFGIFAHWPWHIPV---------------DLHGQPTNCRHSDGCLMPIVMPCTPPE 349
Query: 58 NSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAAD 117
+ ++ GT + + E+ G + +++ EW+ +FE +P+ Y +L++ + A
Sbjct: 350 LCASNMTEGTFRKIREELMRGYVLTKDLGSHDFEWAWIFEPFPYSTTYGQFLRIALCAPT 409
Query: 118 ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGL-SRKE 176
+++L W GWV+SRF L LK+E N ++C P ++ +D + PN+ + WGL +
Sbjct: 410 SEELHDWIGWVKSRFPYLILKLE---NIGIECDPNSSQEVDHTVIKPNTVYHWGLIPLSD 466
Query: 177 VGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGY 230
V + DF + N G +V+ ++ S V LP + D +
Sbjct: 467 VYLDPSSLKEDFMKYIINDVYG----KVKCTDSELTISIVDASELPKSMSNDSF 516
>gi|146081651|ref|XP_001464305.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|398012599|ref|XP_003859493.1| poly(A) polymerase, putative [Leishmania donovani]
gi|134068396|emb|CAM66686.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|322497708|emb|CBZ32784.1| poly(A) polymerase, putative [Leishmania donovani]
Length = 709
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 29/159 (18%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+V+RFFR Y W PNP M +G WDPR++ D
Sbjct: 255 MVTRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGR----GWDPRESKSDAMALF 310
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCG-NRICEEIELGKAE----------WSALF 96
P++TPA N+ Y V+L L+ + ++FQ G + + +++ + AE WS +
Sbjct: 311 PVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAKFGPFGVWSRVL 370
Query: 97 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQL 135
E PFF +++YLQ+ + +DA+ + VESR R L
Sbjct: 371 EPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRIL 409
>gi|157866653|ref|XP_001687718.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
gi|68125332|emb|CAJ03188.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
Length = 700
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 29/159 (18%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+V+RFFR Y W PNP M +G WDPR++ D
Sbjct: 255 MVTRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGR----GWDPRESKSDAMALF 310
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCG-NRICEEIELGKAE----------WSALF 96
P++TPA N+ Y V+L L+ + ++FQ G + + +++ + AE WS +
Sbjct: 311 PVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAKFGPFGVWSRVL 370
Query: 97 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQL 135
E PFF +++YLQ+ + +DA+ + VESR R L
Sbjct: 371 EPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRIL 409
>gi|401418000|ref|XP_003873492.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489722|emb|CBZ24982.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 706
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 29/159 (18%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+++RFFR Y W PNP M +G WDPR++ D
Sbjct: 255 MITRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGR----GWDPRESKSDAMALF 310
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCG-NRICEEIELGKAE----------WSALF 96
P++TPA N+ Y V+L L+ + ++FQ G + + +++ + AE WS +
Sbjct: 311 PVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAKFGPFGVWSRVL 370
Query: 97 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQL 135
E PFF +++YLQ+ + +DA+ + VESR R L
Sbjct: 371 EPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRIL 409
>gi|428177975|gb|EKX46852.1| hypothetical protein GUITHDRAFT_94125 [Guillardia theta CCMP2712]
Length = 613
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 82/158 (51%), Gaps = 9/158 (5%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGEL-------GFSVWDPRKNPKDRSHRMPIITPA 53
+L+ +FF +Y W++ + +++ P E + WDP ++ R + +ITP
Sbjct: 273 LLLEKFFFLYKHWKFEDAIIVAPPEECQAPDGQERYNLHSWDPTRHHFSR-RPLTVITPT 331
Query: 54 YHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDI 113
Y NS++ ++ L V+ + N + + + G++ ++ LFE FF+ Y ++Q+++
Sbjct: 332 YPMANSTFNITDSALNVIRNEISRANSLTQGLAQGESSYNDLFEPAMFFKQYGTFVQIEV 391
Query: 114 VAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHP 151
+ ++ + + G+VES+ R+L K+ GL HP
Sbjct: 392 LGSE-KHIEAFSGYVESQIRKLVEKLTTSQLGLYIVHP 428
>gi|261329513|emb|CBH12495.1| poly(A) polymerase, putative [Trypanosoma brucei gambiense DAL972]
Length = 687
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 29/183 (15%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+V RFFR+Y W PNP M +G WDPR++ D
Sbjct: 252 MVVRFFRIYHTWFSPNPHGSGRENRAIYLTETMRVKTNLGR----GWDPRESKSDALALF 307
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEE-IELGKAE----------WSALF 96
P++TPA N+ Y V++ L+ + ++F G+ IC I +G E WS +
Sbjct: 308 PVLTPAVPYGNACYNVTMTNLRQLCDEFARGHEICSSYIGMGVEETKMKLGPHGIWSKIL 367
Query: 97 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
E FF Y+ YL V + DA+ + VES+ R L + L+ P+
Sbjct: 368 EPVKFFGEYKYYLHVQVTCTDAEAYQGYVDAVESKIRFLWAGTAESRAQSLESFPHVRLR 427
Query: 157 IDP 159
++P
Sbjct: 428 LNP 430
>gi|72391414|ref|XP_846001.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175902|gb|AAX70026.1| poly(A) polymerase, putative [Trypanosoma brucei]
gi|70802537|gb|AAZ12442.1| poly(A) polymerase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 687
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 29/183 (15%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+V RFFR+Y W PNP M +G WDPR++ D
Sbjct: 252 MVVRFFRIYHTWFSPNPHGSGRENRAIYLTETMRVKTNLGR----GWDPRESKSDALALF 307
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEE-IELGKAE----------WSALF 96
P++TPA N+ Y V++ L+ + ++F G+ IC I +G E WS +
Sbjct: 308 PVLTPAVPYGNACYNVTMTNLRQLCDEFARGHEICSSYIGMGVEETKMKLGPHGIWSKIL 367
Query: 97 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
E FF Y+ YL V + DA+ + VES+ R L + L+ P+
Sbjct: 368 EPVKFFGEYKYYLHVQVTCTDAEAYQGYVDAVESKIRFLWAGTAESRAQSLESFPHVRLR 427
Query: 157 IDP 159
++P
Sbjct: 428 LNP 430
>gi|224141615|ref|XP_002324162.1| predicted protein [Populus trichocarpa]
gi|222865596|gb|EEF02727.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 33/37 (89%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPR 37
MLVSRFFRVYTQWRWPNPVM+C IE +LGF VWDPR
Sbjct: 251 MLVSRFFRVYTQWRWPNPVMLCSIEEDDLGFPVWDPR 287
>gi|402468353|gb|EJW03519.1| hypothetical protein EDEG_00201 [Edhazardia aedis USNM 41457]
Length = 1051
Score = 73.9 bits (180), Expect = 8e-11, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++ +FF +Y+ W+WPNPV++ +WDP+ + DR H+MPIITPAY + S++
Sbjct: 739 ILYKFFEIYSNWKWPNPVLLKHNVDRNFNLKIWDPKVHQTDRMHKMPIITPAYPSICSTH 798
Query: 62 KVSLGTLQVMTEQFQ 76
V+ TL V+ E+ +
Sbjct: 799 NVTNTTLGVINEELK 813
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 21/136 (15%)
Query: 95 LFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNG-----LLQC 149
LF+ FF+ Y+ YL + + D WKG++ES+ R L K+E ++ G +++
Sbjct: 896 LFQQSDFFKKYKFYLNIKLTNDD-----KWKGFIESKIRLLCAKLE-NSEGFSIGYMIKA 949
Query: 150 HPYPNKYIDPSKPCPNSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGR 209
P+P ++ FF GL K+ + + V +F R ++++ + EG
Sbjct: 950 VPFPQSFVYND----FVHFFVGLDYKDR------IKINIDKPVNDFLRILNDWDKKDEGS 999
Query: 210 DIYFSYVCRRHLPSFV 225
+I ++ + F+
Sbjct: 1000 EISIKINKKKEIGEFL 1015
>gi|301100486|ref|XP_002899333.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262104250|gb|EEY62302.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 990
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 40/54 (74%)
Query: 5 RFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMN 58
RFF+V ++W+WP PVM+ I LGF +WDPR++ DRSH MPIITPAY MN
Sbjct: 656 RFFQVLSEWQWPQPVMLNMIYDAGLGFDMWDPRQSVFDRSHIMPIITPAYPHMN 709
>gi|218200293|gb|EEC82720.1| hypothetical protein OsI_27407 [Oryza sativa Indica Group]
Length = 455
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 20/200 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF ++ W W PV + G+ P + MPI+ P +
Sbjct: 221 LFTIFFDIFAHWNWQIPVSL----HGQ-------PTNCRRPDGSFMPILLPCTPPEFCTS 269
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
++ GT + + E+ G + +E EW LF +P+ YE +L++ + A +++L
Sbjct: 270 NMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEEL 329
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTSK 181
W GWV+SRFR L LK+E ++C P + +D + P+ WGL K
Sbjct: 330 RDWAGWVKSRFRNLILKLESIG---VECDPDSTEEVDHTVFEPSIVCHWGL------IYK 380
Query: 182 ECQQFDFQGTVKNFRRGIDN 201
D ++F + + N
Sbjct: 381 TSTHIDISSLGEDFMKDVIN 400
>gi|224141617|ref|XP_002324163.1| predicted protein [Populus trichocarpa]
gi|222865597|gb|EEF02728.1| predicted protein [Populus trichocarpa]
Length = 95
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 37/46 (80%)
Query: 138 KIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTSKEC 183
+IE+DTNG+LQCHPYPN+YID SK CP+ AFF GL RKE T+ C
Sbjct: 5 QIERDTNGMLQCHPYPNEYIDASKQCPHCAFFMGLQRKEGVTADGC 50
>gi|219887573|gb|ACL54161.1| unknown [Zea mays]
gi|414888169|tpg|DAA64183.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888170|tpg|DAA64184.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 482
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 20/157 (12%)
Query: 91 EWSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCH 150
+WS LFE +P+ + Y+ +L++ + A +L W GWV+SRFR L LK+E+ ++C
Sbjct: 333 QWSWLFEPFPYDQKYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLERAG---IECD 389
Query: 151 PYPNKYIDPSKPCPNSAFFWGL-SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGR 209
P P++ +D + PN F+WGL ++ + + DF + N G V+
Sbjct: 390 PCPSEEVDHTDNDPNVVFYWGLIPKRIIQVDTSSLKGDFMEDLTNDVYG----TVKCTHS 445
Query: 210 DIYFSYVCRRHLP----SFVFP--------DGYKWHR 234
D+ S V LP S V+P DG + HR
Sbjct: 446 DVTISVVGLPQLPKSMCSRVYPPAVHAALYDGLRGHR 482
>gi|407396778|gb|EKF27540.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 645
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 68/159 (42%), Gaps = 29/159 (18%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+V RFFR+Y W PNP M +G WDPR++ D
Sbjct: 252 IVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGR----GWDPRESKSDAMALF 307
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAE-----------WSALF 96
P++TPA N+ + V+L L+ + +F G+ IC + AE WS L
Sbjct: 308 PVLTPAVPYGNACFNVTLTNLRQLCAEFARGHEICSSSLVASAEEAKSRFGPHGIWSRLL 367
Query: 97 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQL 135
E FF Y+ YL V + DA+ + VES+ R L
Sbjct: 368 EPVKFFGNYKYYLHVLVSCTDAEAYQGYVDAVESKIRFL 406
>gi|154334339|ref|XP_001563421.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134060437|emb|CAM37605.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 709
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 31/160 (19%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+++RFFR Y W PNP M +G WDPR++ D
Sbjct: 255 MITRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGR----GWDPRESKSDAMALF 310
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAE------------WSAL 95
P++TPA N+ Y V+L L+ + ++FQ G+ + +LG + WS +
Sbjct: 311 PVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSN-DLGMSAVEAEAKFGPFGVWSRV 369
Query: 96 FEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQL 135
E PFF + +YL + + +DA+ + VESR R L
Sbjct: 370 LEPAPFFGKFRHYLHIKVSCSDAEHYQAYADGVESRIRIL 409
>gi|145546083|ref|XP_001458725.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426546|emb|CAK91328.1| unnamed protein product [Paramecium tetraurelia]
Length = 550
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 73/133 (54%), Gaps = 10/133 (7%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSYK 62
VS FF++Y+QW W PV++ E + + + D K M IITPAY N+++K
Sbjct: 281 VSLFFQIYSQWNWKVPVVIDESEQEIICYYLQDEDKR---NDKIMQIITPAYPFFNTTFK 337
Query: 63 VSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLL 122
V T Q + ++FQ G + +LG +W+ + + FF+ ++ ++ + IV+ +++
Sbjct: 338 VHKITFQTIFQEFQIGAQ-----KLG--DWNEVLRPFDFFDCFQYFVALSIVSKTSENFH 390
Query: 123 TWKGWVESRFRQL 135
W G+ E++ +L
Sbjct: 391 KWTGFCEAQLPKL 403
>gi|242051340|ref|XP_002463414.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
gi|241926791|gb|EER99935.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
Length = 460
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 8/133 (6%)
Query: 91 EWSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCH 150
+W+ LFE +P+ + Y+ +L++ + A +L W GWV+SRFR L LK+E+ ++C
Sbjct: 301 QWTWLFEPFPYDKKYQQFLRIALCAPTFAELRDWAGWVKSRFRLLILKLERAG---IECD 357
Query: 151 PYPNKYIDPSKPCPNSAFFWGL-SRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGR 209
P P++ +D + PN F+WGL + + + DF ++ N G V+
Sbjct: 358 PCPSEEVDHTDNDPNVVFYWGLIPERIIQVDTSSLKEDFMESITNDVYGT----VKCTHS 413
Query: 210 DIYFSYVCRRHLP 222
D+ S V LP
Sbjct: 414 DVTISVVGLPQLP 426
>gi|71419820|ref|XP_811284.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70875931|gb|EAN89433.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 645
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 68/159 (42%), Gaps = 29/159 (18%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+V RFFR+Y W PNP M +G WDPR++ D
Sbjct: 252 IVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGR----GWDPRESKSDAMALF 307
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAE-----------WSALF 96
P++TPA N+ + V+L L+ + +F G+ IC + AE WS L
Sbjct: 308 PVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPHGIWSRLL 367
Query: 97 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQL 135
E FF ++ YL V + DA+ + VESR R L
Sbjct: 368 EPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESRIRFL 406
>gi|145551783|ref|XP_001461568.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429403|emb|CAK94195.1| unnamed protein product [Paramecium tetraurelia]
Length = 533
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 72/137 (52%), Gaps = 11/137 (8%)
Query: 3 VSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDP----RKNPKDRSHRMPIITPAYHCMN 58
VS FF++Y+QW W PV++ E + + R K M IITPAY N
Sbjct: 257 VSLFFQIYSQWNWKIPVVIDESEQDFIQIETFKTLCWKRDEDKRNDKIMQIITPAYPFFN 316
Query: 59 SSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADA 118
+++KV+ T Q + ++FQ G + +LG +W+ + FF+ ++ ++ + IV+ +
Sbjct: 317 TTFKVNKITFQTIFQEFQIGAQ-----KLG--DWNEVLRPLDFFDCFQYFVAISIVSKSS 369
Query: 119 DDLLTWKGWVESRFRQL 135
++ W G+ E++ +L
Sbjct: 370 ENFHKWTGFCEAQLPKL 386
>gi|440789895|gb|ELR11186.1| Poly(A) polymerase central domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1230
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L++ FF VY W W PV + P R P +S +MPI+TP NS+
Sbjct: 963 LLAEFFEVYNHWDWQQPVAITP----------GSARYKPGHKSDKMPIVTPTPPFNNSAR 1012
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIEL-GKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
V+ TL M ++F I + + +A + L + FF+ Y YL V++ + +D+
Sbjct: 1013 NVARSTLTEMQQEFFRAFDITQASQWNSEAGLNDLLQPTNFFKDYHYYLMVEVHSLSSDE 1072
Query: 121 LLTWK-------GWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID 158
+ W GW+ESR L +E+ N P+P +++
Sbjct: 1073 VTKWPTNFSLSLGWLESRLIALIFDLEK--NPQTYARPFPGTFVN 1115
>gi|71657771|ref|XP_817395.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70882585|gb|EAN95544.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 406
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 29/159 (18%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+V RFFR+Y W PNP M +G WDPR++ D
Sbjct: 13 IVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGR----GWDPRESKSDAMALF 68
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAE-----------WSALF 96
P++TPA N+ + V+L L+ + +F G+ IC + AE WS L
Sbjct: 69 PVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPHGIWSRLL 128
Query: 97 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQL 135
E FF ++ YL V + DA+ + VES+ R L
Sbjct: 129 EPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESKIRFL 167
>gi|118376886|ref|XP_001021625.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|89303391|gb|EAS01379.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 707
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 2 LVSRFFRVYTQWRWPN-PVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
++ +FF Y+ W+WP V++ P FS P + K++ M I TPAY NS+
Sbjct: 388 IIEQFFLQYSSWKWPTMEVLLGP-------FS--QPEERQKNQKFEMSIYTPAYPEYNST 438
Query: 61 YKVSLGTLQVMTEQFQCGNRIC-EEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
+V L+++ + + NRI EEI+ G+A W L + F Y ++++D++ + D
Sbjct: 439 ERVKKINLEIIDYKIKEANRIIQEEIKTGQAPWDRLIQEEDFLNKYTKFIEIDLIRIERD 498
Query: 120 DLL----TWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN-SAFFWGLSR 174
+ + T + + + L Q L+ P+P Y + P SAF G+
Sbjct: 499 ETMREFKTQQDKLSVKLLTLFEFFSQKKPQELEIRPWPFFYKKKDQKYPQCSAFLIGIKA 558
Query: 175 KEVGTSKECQQFDFQGTVKNF----RRGID 200
K S +++ F+ ++ F R+ +D
Sbjct: 559 K----SHIQEEYSFKNCIQEFAMQQRKSLD 584
>gi|440789896|gb|ELR11187.1| EGFlike domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 904
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L++ FF VY W W PV + P R P +S +MPI+TP NS+
Sbjct: 740 LLAEFFEVYNHWDWQQPVAITP----------GSARYKPGHKSDKMPIVTPTPPFNNSAR 789
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIEL-GKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
V+ TL M ++F I + + +A + L + FF+ Y YL V++ + +D+
Sbjct: 790 NVARSTLTEMQQEFFRAFDITQAPQWNSEAGLNDLLQPTNFFKDYHYYLMVEVHSLSSDE 849
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID 158
+ GW+ESR L +E+ N P+P +++
Sbjct: 850 VTKCLGWLESRLIALIFDLEK--NPQTYARPFPGTFVN 885
>gi|407832565|gb|EKF98495.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 645
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 29/159 (18%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+V RFFR+Y W PNP M +G WDPR++ D
Sbjct: 252 IVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGR----GWDPRESKSDAMALF 307
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAE-----------WSALF 96
P++TPA N+ + V+L L+ + +F G+ IC + AE WS L
Sbjct: 308 PVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPHGIWSRLL 367
Query: 97 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQL 135
E FF ++ YL V + DA+ + VES+ R L
Sbjct: 368 EPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESKIRFL 406
>gi|342182011|emb|CCC91490.1| putative poly(A) polymerase [Trypanosoma congolense IL3000]
Length = 677
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 29/185 (15%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+V RFFR+Y W PNP M +G WDPR++ D
Sbjct: 252 MVVRFFRIYHAWFSPNPQGSGKENRAIYLTETMRVKTNLGR----CWDPRESKSDALALF 307
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEE-IELGKAE----------WSALF 96
P++TPA N+ + V++ L+ + +F G+ IC I + E WS +
Sbjct: 308 PVLTPAVPYGNACFNVTMTNLRQLCAEFSRGHNICSSCIGMNVNETKEKFGPHGLWSKIL 367
Query: 97 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
E FF Y+ Y+ V + +DA+ + VES+ R L + ++ P+ +
Sbjct: 368 EPVKFFGEYKYYMHVQVTCSDAELYQGYVEAVESKIRFLWAGTAESRAQSIESFPHIQLH 427
Query: 157 IDPSK 161
++P +
Sbjct: 428 LNPRR 432
>gi|261265299|gb|ACX55867.1| polyA polymerase [Bubalus bubalis]
Length = 83
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 37/58 (63%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
LV +FF V +W WPNPV++ E L VWDPR NP DR H MPIITPAY NS
Sbjct: 26 LVHKFFLVSPKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNS 83
>gi|218200294|gb|EEC82721.1| hypothetical protein OsI_27409 [Oryza sativa Indica Group]
Length = 293
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 12/183 (6%)
Query: 47 MPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYE 106
MPI+ P + ++ GT + + E+ G + +E EW LF +P+ YE
Sbjct: 93 MPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYE 152
Query: 107 NYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNS 166
+L++ + A +++L W GWV+SRFR L LK+E ++C P + +D + P+
Sbjct: 153 EFLRIALCAPTSEELRDWAGWVKSRFRNLILKLESIG---VECDPDSTEEVDHTVFEPSI 209
Query: 167 AFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDN---YRVRREGRDIYFSYVCRRHLPS 223
WGL K D ++F + + N +V+ + S V LP
Sbjct: 210 VCHWGL------IYKTSTHIDISSLGEDFMKDVINDVYGKVKGTHSKLTMSIVRSSQLPK 263
Query: 224 FVF 226
++
Sbjct: 264 SLY 266
>gi|403331436|gb|EJY64664.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 1239
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 96/242 (39%), Gaps = 74/242 (30%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGEL---------GFSVWDPRKNPKDRSHRMPIITP 52
++ +FF VY W+W +PV I +G+ V D MPI+TP
Sbjct: 291 IIYKFFEVYADWKWFDPVF---IRVGKKKDKTKLDLNKLQVLDAYS-----QDIMPILTP 342
Query: 53 AYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEI--------------------------- 85
+ NS+Y+V T + ++F G + +E+
Sbjct: 343 NTNPKNSAYRVCSHTFDTICKEFTRGKNLMKELIPQSQKTIKPHPAALAKLALDQEETKL 402
Query: 86 ----------------------ELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLLT 123
+ K W LF+ + FF+ YE++L++DI++ D L
Sbjct: 403 TVDALQIQESNQESQVQSPVQKQKQKQSWIKLFQKFRFFDQYEHFLKIDILSTDESAHLK 462
Query: 124 WKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYI-DPSKPCPNSAF------FWGLSRKE 176
W G+VES+ R+L +++ QD + YP + + ++ N+AF F G+ E
Sbjct: 463 WLGYVESQLRRL-MQLLQDIEQISGLRIYPRSFNREETQDTINNAFKCCDSYFIGIKFNE 521
Query: 177 VG 178
G
Sbjct: 522 AG 523
>gi|219117850|ref|XP_002179712.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217408765|gb|EEC48698.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 336
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF V+ WRWP P+++ G VW + + P+ITPAY MNS+
Sbjct: 229 LLRKFFLVFKTWRWPQPLLLTKPHDAGYGLPVWSVATAVRQVA---PMITPAYPAMNSTL 285
Query: 62 KVSLGTLQVMTEQFQCGNRICEEI-------ELGKAEWSALFEHYPFFEAY 105
VS TLQ++ E+F G+ + +++ + W+ LFE FF Y
Sbjct: 286 AVSRQTLQILQEEFNRGHTVVDQLWKDYQKNPAQELNWNTLFEPSDFFINY 336
>gi|358332465|dbj|GAA51116.1| poly(A) polymerase, partial [Clonorchis sinensis]
Length = 1210
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 48/88 (54%), Gaps = 13/88 (14%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIE-MGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNS 59
MLV FF++++QW WP PV + E + L VWDPR N D+ H MPI+TP+Y NS
Sbjct: 1133 MLVYLFFKIFSQWPWPKPVRLRESEYIPSLCLPVWDPRLNLMDQYHLMPILTPSYPSQNS 1192
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIEL 87
+Y V Q NRI E EL
Sbjct: 1193 AYNV------------QRSNRIILEREL 1208
>gi|344249366|gb|EGW05470.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 63
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/60 (56%), Positives = 41/60 (68%)
Query: 47 MPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYE 106
MPIITPAY NS+Y VS+ T VM E+F+ G I +EI L KAEWS LFE FF+ Y+
Sbjct: 1 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYK 60
>gi|62088188|dbj|BAD92541.1| poly(A) polymerase gamma variant [Homo sapiens]
Length = 382
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 70 VMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVE 129
VM E+F+ G + +EI GK++WS L E FF+ Y +Y+ + A+ ++ L W G VE
Sbjct: 3 VMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVE 62
Query: 130 SRFRQLTLKIEQD---TNGLLQCHPYP--------NKYIDPSKPCPNSAFFWGLSRKEVG 178
S+ R L +E++ T + +P N Y+ S +F G+ + V
Sbjct: 63 SKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYV--------SMWFLGIIFRRVE 114
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
++ +D Q R +N + +EG I ++V ++ L
Sbjct: 115 NAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 160
>gi|308472139|ref|XP_003098298.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
gi|308269146|gb|EFP13099.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
Length = 343
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 57/231 (24%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
++ + F V++ W+WP+PV++ + C++S
Sbjct: 110 IIQKVFFVFSTWKWPSPVVL------------------------------KQFGCVDSKL 139
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
TL ++ E+ + IC++I+ G A W+ LFE FF Y++++ + I + D
Sbjct: 140 ANLKSTLHIIQEEMKSALEICDQIQKGNATWNDLFEEINFFSRYKHFVALTI---NED-- 194
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPN-SAFFWGLSRKEVGTS 180
T G+ ES+ RQL IE+++ + H P K K N S +F GL E
Sbjct: 195 -TNIGFFESKIRQLVQIIERNSQ-VKTAHINPRKL----KNIRNESTWFLGLEFTE---- 244
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIY------FSYVCRRHLPSFV 225
+ D ++ F+R + R++ + I +YV R L F+
Sbjct: 245 -NAKNLDLTSEIEGFKRNM----ARQQSKGIVGQIQLDATYVKRSDLIKFI 290
>gi|24059888|dbj|BAC21354.1| poly(A) polymerase-like protein [Oryza sativa Japonica Group]
Length = 472
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 21/200 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF ++ W W PV + G+ P + MPI+ P +
Sbjct: 239 LFTIFFDIFAHWNWQIPVSL----HGQ-------PTNCRRPDGSFMPILLPCTPPEFCTS 287
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
++ GT + + E+ G + +E EW LF +P+ YE +L++ + A +++L
Sbjct: 288 NMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEEL 347
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTSK 181
W GWV+SRF L LK+E ++C P + +D + P+ WGL K
Sbjct: 348 RDWAGWVKSRF-NLILKLESIG---VECDPDSTEEVDHTVFEPSIVCHWGL------IYK 397
Query: 182 ECQQFDFQGTVKNFRRGIDN 201
D ++F + + N
Sbjct: 398 TSTHIDISSLGEDFMKDVIN 417
>gi|222637720|gb|EEE67852.1| hypothetical protein OsJ_25654 [Oryza sativa Japonica Group]
Length = 454
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 24/228 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L + FF ++ W W PV + G+ P + MPI+ P +
Sbjct: 221 LFTIFFDIFAHWNWQIPVSL----HGQ-------PTNCRRPDGSFMPILLPCTPPEFCTS 269
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
++ GT + + E+ G + +E EW LF +P+ YE +L++ + A +++L
Sbjct: 270 NMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEEL 329
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTSK 181
W GWV+SRF L LK+E ++C P + +D + P+ WGL K
Sbjct: 330 RDWAGWVKSRF-NLILKLESIG---VECDPDSTEEVDHTVFEPSIVCHWGL------IYK 379
Query: 182 ECQQFDFQGTVKNFRRGIDN---YRVRREGRDIYFSYVCRRHLPSFVF 226
D ++F + + N +V+ + S V LP ++
Sbjct: 380 TSTHIDISSLGEDFMKDVINDVYGKVKGTHSKLTMSIVRSSQLPKSLY 427
>gi|340054738|emb|CCC49040.1| putative poly(A) polymerase [Trypanosoma vivax Y486]
Length = 671
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 65/159 (40%), Gaps = 29/159 (18%)
Query: 2 LVSRFFRVYTQWRWPNP--------------VMMCPIEMGELGFSVWDPRKNPKDRSHRM 47
+V RFFR+Y W PNP M +G WDPR++ D
Sbjct: 252 MVVRFFRIYHSWFSPNPHESGKENRAIYLTETMRVKTSLGR----CWDPRESKSDALALF 307
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEE----------IELGK-AEWSALF 96
P++TPA N+ Y V++ L+ + +F G+ IC + GK W+ +
Sbjct: 308 PVLTPAVPYGNACYNVTITNLRQLCSEFARGHEICSSCIGMSVNDTRTKFGKYGLWNKIL 367
Query: 97 EHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQL 135
E F Y YL + I D + + VES+ R L
Sbjct: 368 EPVKVFGEYRYYLHIQITCTDPEAYQGYVDAVESKIRFL 406
>gi|384485221|gb|EIE77401.1| hypothetical protein RO3G_02105 [Rhizopus delemar RA 99-880]
Length = 472
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 9/74 (12%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VSRFF + ++W WP PV++ P+E G + P D++HRMPIITP + M +++
Sbjct: 248 IVSRFFHIMSKWEWPQPVLLKPMEEGPI---------YPADKAHRMPIITPGFPSMCATH 298
Query: 62 KVSLGTLQVMTEQF 75
V+ T +M +F
Sbjct: 299 NVTNSTRSIMMNEF 312
>gi|334121414|ref|ZP_08495483.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
gi|333455032|gb|EGK83696.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
Length = 1034
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHR-MPIITPAYHCMNS 59
+L++ FF++ +Q W P+ + E G ++ P +S P+IT C NS
Sbjct: 832 ILLAHFFQILSQHDWTQPIAL--TEGG---------KQYPVRKSREWFPVITSIEPCQNS 880
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
+ V+ T +++ + G I EE+ G W+ LFE E +L + + +A+
Sbjct: 881 TRNVTRSTAEILRRELGRGAEIAEEVLAGNTAWTTLFESADLPEQSNAFLVLTVSSAEVG 940
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYP 153
+L GW+E L + +EQ N + P P
Sbjct: 941 ELEKCGGWLEGNTIGLAINLEQKLN--IHVRPRP 972
>gi|294892267|ref|XP_002773978.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239879182|gb|EER05794.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 534
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 91/204 (44%), Gaps = 36/204 (17%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGEL----GF---SVW--DPRKNPKDR-----SHRM 47
LV RFFRVY++W W + E GF VW P++ D+ + M
Sbjct: 257 LVVRFFRVYSRWNWDPSEGAVVLRHSEQRNGEGFQHHKVWCPPPKRTTTDQPLPLAASPM 316
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEE--IELGKAE-WSALFEHYPFFE- 103
+ITPAY MNS++ V+ T+ + ++ + G I ++L E W L E FF+
Sbjct: 317 AVITPAYPSMNSTFGVTRMTMDTIKKELERGAGIISSKGVDLRSRECWETLLEPIHFFDY 376
Query: 104 ---AYENYLQVDIVAADADDLLTWKGWVESRFRQLTLK-----IEQDTNGLLQCHPY--- 152
Y+ +LQ++I A + +G V S+ + L L+ +DTN PY
Sbjct: 377 DQGGYKQFLQIEIGGASELSHKSAEGLVNSKLKPLLLRKMPEVAPEDTNK----APYRAW 432
Query: 153 --PNKYIDPSKPCPN-SAFFWGLS 173
DP K P SA F GLS
Sbjct: 433 TGAVALEDPYKEYPYCSALFVGLS 456
>gi|82655167|emb|CAJ43765.1| poly(A) polymerase alpha [Oncorhynchus mykiss]
Length = 167
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 33/51 (64%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITP 52
LV +FF V+++W WPNPV++ E L VW PR P DR H MPIITP
Sbjct: 117 LVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWGPRVTPSDRYHLMPIITP 167
>gi|383455075|ref|YP_005369064.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
gi|380728996|gb|AFE04998.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
Length = 1021
Score = 60.8 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 12/143 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+S FF + W WP PV + P R P+ + +P+I PA N++
Sbjct: 808 LLSHFFGTFAAWPWPQPVTLTP----------ETARYRPEGKRDLLPVIAPALPARNTAR 857
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKA--EWSALFEHYPFFEAYENYLQVDIVAADAD 119
VS T +V+ E+ + +A W+ALF+ E L++ + A A+
Sbjct: 858 NVSRSTYRVIREELLRARELVARARSSRAPSSWAALFQPLSAHETSPAALRLSVDAPTAE 917
Query: 120 DLLTWKGWVESRFRQLTLKIEQD 142
D GW+ L ++E D
Sbjct: 918 DREVVAGWILGHVTALVYRLEGD 940
>gi|115474207|ref|NP_001060702.1| Os07g0688500 [Oryza sativa Japonica Group]
gi|113612238|dbj|BAF22616.1| Os07g0688500 [Oryza sativa Japonica Group]
Length = 447
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 47 MPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYE 106
MPI+ P + ++ GT + + E+ G + +E EW LF +P+ YE
Sbjct: 280 MPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYE 339
Query: 107 NYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNS 166
+L++ + A +++L W GWV+SRF L LK+E ++C P + +D + P+
Sbjct: 340 EFLRIALCAPTSEELRDWAGWVKSRF-NLILKLESIG---VECDPDSTEEVDHTVFEPSI 395
Query: 167 AFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDN 201
WGL K D ++F + + N
Sbjct: 396 VCHWGL------IYKTSTHIDISSLGEDFMKDVIN 424
>gi|427738965|ref|YP_007058509.1| poly(A) polymerase [Rivularia sp. PCC 7116]
gi|427374006|gb|AFY57962.1| poly(A) polymerase [Rivularia sp. PCC 7116]
Length = 1067
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 10/139 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L++ FF Q+ W P+ + + G+ +SV PR +PIIT C N++
Sbjct: 884 LLANFFNHLNQYNWRQPIALT--DAGK-QYSVQVPRD-------LLPIITSIEPCQNTAR 933
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
++ T ++++ +F + +EI G +WS+LFE + + +L + ++ D L
Sbjct: 934 NITRSTAEILSGEFARATEMTQEIAAGNLDWSSLFEPINLQQESDIFLNLKLIGNDKQQL 993
Query: 122 LTWKGWVESRFRQLTLKIE 140
G++E L +++E
Sbjct: 994 EKECGYLEGYIISLIIQLE 1012
>gi|348529712|ref|XP_003452357.1| PREDICTED: poly(A) polymerase gamma-like [Oreochromis niloticus]
Length = 763
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 90/233 (38%), Gaps = 62/233 (26%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
LV +FF V+++W WPNPV++ E L VWDPR + ITP ++ +
Sbjct: 266 LVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVS----------ITPVFYLL---- 311
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
+ HY A A+ ++
Sbjct: 312 ---------------------------------MVLHYIVLTAS---------ASTEENH 329
Query: 122 LTWKGWVESRFRQLTLKIEQD---TNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVG 178
L W G VES+ R L +E++ T + +P + ++ S +F G+ K+V
Sbjct: 330 LEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRNENDFVSMWFIGIIFKKVE 389
Query: 179 TSKECQ---QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPD 228
++ +D Q R +N + +EG I ++V ++ L ++ P+
Sbjct: 390 NAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHQYLPPE 442
>gi|189194681|ref|XP_001933679.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979243|gb|EDU45869.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1151
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 48/230 (20%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPK-DRSHRMPIITPAYHCMNS- 59
LV+ FF Y Q+ W N E+ + V+ +K P+ +RS R P++ +H NS
Sbjct: 761 LVTSFFHHYGQFDWTN----------EMVYDVFFHKKRPRYNRSAREPMVVLGFHAPNSN 810
Query: 60 -SYKVSLGTLQVMTEQFQ-CGNRICEEIELGKAEWSALFEHYP--------------FFE 103
++ ++ LQ + ++F+ G R+CE+ W A F P F E
Sbjct: 811 IAHTSTVPGLQTLVKEFKAAGERLCEQ----GMTWDAFFGLGPTLSSVSSPSLGAAGFLE 866
Query: 104 AYENYLQVDI-----VAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID 158
Y N+++VDI L+ GWVESR L ++I + T + +P ++ +
Sbjct: 867 TYHNFVKVDIQFWGRTLTKGKSLV---GWVESRCISLIVEIHK-TLPNSEVRIWPGRFTN 922
Query: 159 PSKPCPNSA------FFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNY 202
+ + + GLS+ TS + D Q + + ID +
Sbjct: 923 NETSAADESRDYHGCYLIGLSKATNFTSVDAPD-DKQAAKQALEKVIDRF 971
>gi|167393770|ref|XP_001740701.1| poly(A) polymerase [Entamoeba dispar SAW760]
gi|165895071|gb|EDR22875.1| poly(A) polymerase [Entamoeba dispar SAW760]
Length = 521
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 118/276 (42%), Gaps = 32/276 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF+VY+ W W + P+ +G + N K + + I+TPA N+++
Sbjct: 233 LLEKFFQVYSSWDW----LRAPVMLGT------NDDFNDKKKEGVIQILTPASPSENAAF 282
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIEL-GKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
++ +L+++ + + G I E G +W+ LF+ F Y +++ + ++ +
Sbjct: 283 SITKFSLELIKRELKRGQEIVHEFSSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEG 342
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
L T G ES L +K + +++ + PN ++D N +F+ + +
Sbjct: 343 LTTTIGKFESGLVNL-MKGLSEIEEIVEANVIPNGFLDEE----NEKYFYYVG---MNVK 394
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYF--SYVCRRHLPSFVFPDGYKWHRPSRH 238
++C D + +F + G+D+ S R +P+ K S+
Sbjct: 395 RDC-PVDISTPLNSF------LSIVNSGKDLIVDASIKKRSEIPTKFAHSVKKSINKSQE 447
Query: 239 FNEQSGK----PCEDVKMCQSCSSERQLKRKKEHEI 270
E S + E + S E+QLK K+E+ I
Sbjct: 448 VKETSSQVPSSVTETFDIPTKPSIEQQLKAKEENSI 483
>gi|194696942|gb|ACF82555.1| unknown [Zea mays]
Length = 131
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 118 ADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS-RKE 176
++L W GWV+SRFR L LK+E + C P P++ +D + PN FFWGL R+
Sbjct: 2 GEELRDWVGWVKSRFRNLLLKLESLG---VYCDPDPSEQVDHTITDPNVVFFWGLIYRRN 58
Query: 177 VGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVF 226
+ + DF +V N G + + DI S V LP VF
Sbjct: 59 IQICISSLKEDFMKSVCNNIYG----KEKCAHSDITMSIVGPPQLPKSVF 104
>gi|67481711|ref|XP_656205.1| poly(A) polymerase [Entamoeba histolytica HM-1:IMSS]
gi|74890661|sp|Q51D88.1|PAP_ENTHI RecName: Full=Poly(A) polymerase; Short=PAP; AltName: Full=EhPAP;
AltName: Full=Polynucleotide adenylyltransferase
gi|56473392|gb|EAL50821.1| poly(A) polymerase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709651|gb|EMD48877.1| poly(A) polymerase, putative [Entamoeba histolytica KU27]
Length = 522
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF+VY+ W W + P+ +G + N K + + I+TPA N+++
Sbjct: 233 LLEKFFQVYSSWDW----LRTPVMLGT------NDDFNDKKKEGVIQILTPASPSENAAF 282
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIEL-GKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
++ +L+++ + + G I E G +W+ LF+ F Y +++ + ++ +
Sbjct: 283 SITKFSLEMIKRELKRGQEIVHEFSSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEG 342
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID 158
L T G ES L +K + +++ + PN ++D
Sbjct: 343 LTTTIGKFESGLVNL-MKGLSEIEEIIEANVIPNGFLD 379
>gi|310817728|ref|YP_003950086.1| endonuclease/exonuclease/phosphatase domain-containing protein
[Stigmatella aurantiaca DW4/3-1]
gi|309390800|gb|ADO68259.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella
aurantiaca DW4/3-1]
Length = 1024
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 27/177 (15%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ FF ++ W WP PV + P R P+ + +MP++ PA N++
Sbjct: 822 LLDYFFEMFAAWPWPLPVTLTP----------GTARYVPEGKRDQMPVVAPALPPRNTAR 871
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAE-----WSALFEHYPFFEAYENYLQVDIVAA 116
VS TL+V+ E+ R E + + E W ALF + V + A
Sbjct: 872 NVSRSTLRVLREELA---RASEALRRARQEGTAEAWDALFAPVEIPGPTAAQVVVSVEAK 928
Query: 117 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLS 173
+D GW+ L ++E D L+ P+P PS+ P F GLS
Sbjct: 929 AHEDRQVAAGWILGHLTALVYRLEGDRRLFLR--PFP-----PSQ--PEGPFRIGLS 976
>gi|407036560|gb|EKE38225.1| poly(A) polymerase, putative [Entamoeba nuttalli P19]
Length = 522
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ +FF+VY+ W W + P+ +G + N K + + I+TPA N+++
Sbjct: 233 LLEKFFQVYSSWDW----LRTPVMLGT------NDDFNDKKKEGIIQILTPASPSENAAF 282
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIEL-GKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
++ +L+++ + + G I E G +W+ LF+ F Y +++ + ++ +
Sbjct: 283 SITKFSLEMIKRELKRGQEIVHEFSSEGVNDWAKLFKPRHLFCGYYIFIEFIVTSSSLEG 342
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID 158
L T G ES L +K + +++ + PN ++D
Sbjct: 343 LTTTIGKFESGLVNL-MKGLSEIEEIIEANVIPNGFLD 379
>gi|115378897|ref|ZP_01466034.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
gi|115364103|gb|EAU63201.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
Length = 1080
Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 25/166 (15%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L+ FF ++ W WP PV + P R P+ + +MP++ PA N++
Sbjct: 878 LLDYFFEMFAAWPWPLPVTLTP----------GTARYVPEGKRDQMPVVAPALPPRNTAR 927
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAE-----WSALFEHYPFFEAYENYLQVDIVAA 116
VS TL+V+ E+ R E + + E W ALF + V + A
Sbjct: 928 NVSRSTLRVLREELA---RASEALRRARQEGTAEAWDALFAPVEIPGPTAAQVVVSVEAK 984
Query: 117 DADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKP 162
+D GW+ L ++E D L+ P+P PS+P
Sbjct: 985 AHEDRQVAAGWILGHLTALVYRLEGDRRLFLR--PFP-----PSQP 1023
>gi|222623746|gb|EEE57878.1| hypothetical protein OsJ_08540 [Oryza sativa Japonica Group]
Length = 253
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 32/89 (35%)
Query: 68 LQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGW 127
L+V TEQ G+ +C+EI V A A W GW
Sbjct: 148 LRVTTEQLAVGDDVCQEI----------------------------VKAGA----MWVGW 175
Query: 128 VESRFRQLTLKIEQDTNGLLQCHPYPNKY 156
VESR RQL+ ++E DT+G+L CH +P Y
Sbjct: 176 VESRLRQLSARVEADTSGVLLCHLHPQAY 204
>gi|401881479|gb|EJT45778.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 2479]
gi|406696602|gb|EKC99884.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 8904]
Length = 573
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 96/264 (36%), Gaps = 82/264 (31%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
+VS+FF +Y QW MP+ITPAY M S++
Sbjct: 229 IVSKFFPIYYQW---------------------------------MPVITPAYPSMCSTH 255
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
++ T+ ++ + ++I + W LF FF Y Y+QV A+ A DL
Sbjct: 256 NITQSTMTIIKNEM-LRDKIVNN---PGSSWVELFTPVDFFSLYRTYVQVVASASSAQDL 311
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPC----PNSAFFWGLSRKEV 177
W R L +E N LL HP N I + C + G E
Sbjct: 312 KDW-------LRTLVQDLEMTDNVLL-AHPQVNG-ISKTYICLTEEEQAQASQGELPPEA 362
Query: 178 GTSKECQQFDFQGT---VKNFRRGIDNYRVRREGR-----DIY-----FSYVC------- 217
KE D + T KNF G+D + ++G+ ++Y F + C
Sbjct: 363 MMRKEEDYADKEHTKVYTKNFFIGLDIEKKPKDGQQPRQLNLYYASKRFCFACQSWDKYN 422
Query: 218 ------------RRHLPSFVFPDG 229
R LP+F FPDG
Sbjct: 423 EQDMSVILRPCKRSELPAFCFPDG 446
>gi|154341292|ref|XP_001566599.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063922|emb|CAM40113.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 417
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 37/235 (15%)
Query: 1 MLVSRFFRVYTQWRW----PNPVMMCPIEMGELGFSVWDPRKNPK-----DRSHRMPIIT 51
+++ FF +Y W +PV + P E E V P P D + P++
Sbjct: 155 VILRFFFSLYVWWLLRDTRMDPVSIVPKE--EDAAIVRVPGMPPPWDAVWDAADLFPVLN 212
Query: 52 PAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQV 111
PA +N+++ V LQ+ ++ ++C + L +S L++ Y + + ++ V
Sbjct: 213 PAQPTVNAAHAVGRSGLQLFFKELLRAEQLCASVPLS---YSELWKPYNILDEHRFFVGV 269
Query: 112 DI------VAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPS----- 160
I +AA D + WKG+VES+ R L +E + + P+P +D S
Sbjct: 270 HISCEHPSLAACEDTINAWKGYVESKLRMLVYSLE----CVAEVRPFPRPVVDESPREVT 325
Query: 161 -----KPCPNSAFFWGL--SRKEVGTSKECQQF-DFQGTVKNFRRGIDNYRVRRE 207
C + AFF+G+ K+V S F +F+ +V G + + RE
Sbjct: 326 RSGVTMHCRSRAFFFGVRNGNKDVARSDVEAAFSEFEFSVTEGTTGKNPFEWDRE 380
>gi|300123436|emb|CBK24709.2| unnamed protein product [Blastocystis hominis]
Length = 363
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 23/179 (12%)
Query: 6 FFRVYTQWRWPNPVMMCP-IEMGELGFSVWDPRKNPKDRSHR--MPIITPAYHCMNSSYK 62
FF + M P + ELGF + P + S+ + ++TP Y MN++
Sbjct: 129 FFHFVADHLGSEIIAMTPQLSFPELGFDEENWSDKPSNFSNHDSLVLLTPTYPRMNTART 188
Query: 63 VSLGTLQVMTEQFQCGNRICEEIEL---GKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
+S +LQ + Q R+ E+I+ G++ + E Y FFE + Y +V + A+
Sbjct: 189 ISRSSLQFIRSQ---ARRVYEKIKSYVDGESTLLQMVEPYQFFEGFPIYFEVLVSASANS 245
Query: 120 DLLTWKGWVESRFRQ----LTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSA-FFWGLS 173
+ W G VES+ R L+L+IE + +P P SK N+A F+ GL+
Sbjct: 246 EFKDWLGLVESKIRYLVFFLSLRIEN-----VALNPNP----IVSKSNSNAACFYIGLT 295
>gi|344252871|gb|EGW08975.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 384
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 21/166 (12%)
Query: 70 VMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVE 129
V E+F+ G I +EI L KA+WS FE FF+ ++Y+ + A L W G VE
Sbjct: 2 VAVEEFKQGLAITDEILLSKAKWSKFFEAPNFFQKCKHYIVLLASAPTEKQRLEWVGLVE 61
Query: 130 SRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFW--GLSRKEVGTSKECQ--- 184
S+ R L +E+ N++I + P W GL K+ S+
Sbjct: 62 SKIRILVGSLEK------------NEFITLAHVNPEFRTIWVIGLVFKKTENSENLNVDL 109
Query: 185 QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRH----LPSFVF 226
+D Q + R N ++ +V R+ LPS+V
Sbjct: 110 TYDIQSFMDTVYRQAINSKMFELDMKTAAMHVKRKQLHQLLPSYVL 155
>gi|401415606|ref|XP_003872298.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488522|emb|CBZ23768.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 500
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 28/171 (16%)
Query: 42 DRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPF 101
D + P++ PA +N+++ V LQ+ ++ ++C + + +SAL+E Y
Sbjct: 286 DAADLFPVLNPARPTVNAAHAVGRSGLQLFLKELLRAEQLCSLVPM---PYSALWEPYNV 342
Query: 102 FEAYENYLQVDI------VAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNK 155
+ + ++ V I +AA D + WKG+VES+ R +E + + P+P
Sbjct: 343 LDEHRFFVGVHISSEHQSLAACEDTINAWKGYVESKLRMFVYALE----CVAEVRPFPCP 398
Query: 156 YID-PSKP---------CPNSAFFWGL--SRKEVGTS---KECQQFDFQGT 191
+D P + C + AFF+G+ K+V S ++F+F T
Sbjct: 399 VVDEPPRAVTRRGVTVHCRSRAFFFGVRNGNKDVAHSDVESAFREFEFAVT 449
>gi|330926264|ref|XP_003301394.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
gi|311323960|gb|EFQ90506.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
Length = 1230
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 40/163 (24%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPK-DRSHRMPIITPAYHCMNS- 59
LV+ FF Y Q+ W N ++ + V+ +K P+ +RS R P++ +H NS
Sbjct: 840 LVASFFHHYGQFDWTN----------DMVYDVFFHKKRPRYNRSTREPMVVLGFHTPNSN 889
Query: 60 -SYKVSLGTLQVMTEQFQCGN-RICEEIELGKAEWSALFE--------------HYPFFE 103
++ ++ LQ++ ++F+ + R+CE W A F F E
Sbjct: 890 IAHTSTMPGLQILVKEFKAADKRLCEP----GMTWDAFFGPGSTLSPVSSPSLGAAGFLE 945
Query: 104 AYENYLQVDI-----VAADADDLLTWKGWVESRFRQLTLKIEQ 141
Y+N+++VDI L+ GWVESR L ++I +
Sbjct: 946 TYQNFVKVDIQFWGRTLTKGKSLV---GWVESRCISLIVEIHK 985
>gi|351712642|gb|EHB15561.1| Poly(A) polymerase gamma [Heterocephalus glaber]
Length = 528
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 39 NPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEH 98
NP DR H MPIITPAY NS+Y VS T VM E+F+ R I + K H
Sbjct: 216 NPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQVYRQANNINMLKEGMKIEATH 275
Query: 99 YPFFEAYENYLQVDIV 114
+ ++ YL +I+
Sbjct: 276 VKKKQLHQ-YLPAEIL 290
>gi|71660695|ref|XP_822063.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70887456|gb|EAO00212.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 485
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 15/157 (9%)
Query: 34 WDPRKNPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWS 93
WDPR++ R +P+I PAY +N + V +L+V + R+ +E
Sbjct: 277 WDPRRD-ACRDDLLPVINPAYPYVNDARNVGRCSLEVFYAELTYAYRLLSNLE---TPLE 332
Query: 94 ALFEHYPFFEAYENYLQVDIVAADADD------LLTWKGWVESRFRQLTLKIEQDTNGLL 147
A++E Y + Y + V + + ++ L W +V S+ R L +E+ ++
Sbjct: 333 AIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSKLRILLYALER----IV 388
Query: 148 QCHPYPNKYID-PSKPCPNSAFFWGLSRKEVGTSKEC 183
PYP K D P + P S F S VG ++
Sbjct: 389 DARPYPQKLNDGPPRSAPKSGRFLKGSCFIVGIKEKV 425
>gi|146093287|ref|XP_001466755.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|134071118|emb|CAM69802.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
Length = 500
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 94/225 (41%), Gaps = 40/225 (17%)
Query: 1 MLVSRFFRVYTQWRWPN----PVMMCPIEMGELGFSV------WDPRKNPKDRSHRMPII 50
+++ FF +Y W + PV + P + V WD + D P++
Sbjct: 238 VILRFFFSLYVWWLLRDTRIAPVSIVPTDENAAIARVPGMPPPWDAVWDAADL---FPVL 294
Query: 51 TPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQ 110
PA +N+++ V LQ+ ++ ++C + + +SAL+E Y + + ++
Sbjct: 295 NPARPTVNAAHAVGRSGLQLFLKELLRAEQLCALVPMS---YSALWEPYNILDEHRFFVG 351
Query: 111 VDI------VAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID-PSKP- 162
V I +AA D + WKG+VES+ R +E + + P+ +D P +
Sbjct: 352 VHISSEHQSLAACEDTINAWKGYVESKLRMFVYALE----CVAEVRPFSRPVVDEPPRVV 407
Query: 163 --------CPNSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGI 199
C + AFF+G+ +K+ + D + + F +
Sbjct: 408 TRRGVKVHCRSRAFFFGVRNG----NKDVEHSDVEAAFREFEFAV 448
>gi|407849942|gb|EKG04508.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 285
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 15/156 (9%)
Query: 34 WDPRKNPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWS 93
WDPR++ R +P+I PAY +N + V +L+V + R+ +E
Sbjct: 77 WDPRRD-ACRDDLLPVINPAYPYVNDARNVGRCSLEVFYAELTYAYRLLSNLE---TPLE 132
Query: 94 ALFEHYPFFEAYENYLQVDIVAADADD------LLTWKGWVESRFRQLTLKIEQDTNGLL 147
++E Y + Y + V + + ++ L W +V S+ R L +E+ L+
Sbjct: 133 TIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSKLRILLYALER----LV 188
Query: 148 QCHPYPNKYID-PSKPCPNSAFFWGLSRKEVGTSKE 182
PYP K D P + P S F S VG ++
Sbjct: 189 DARPYPQKLNDGPPRSVPKSGRFLKGSCFIVGIKEK 224
>gi|389594193|ref|XP_003722343.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
gi|321438841|emb|CBZ12601.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
Length = 500
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 83/193 (43%), Gaps = 36/193 (18%)
Query: 6 FFRVYTQWRWPN----PVMMCPIEMGELGFSV------WDPRKNPKDRSHRMPIITPAYH 55
FF +Y W + PV + P++ V WD + D P++ PA
Sbjct: 243 FFSLYVWWLLRDTRIAPVSIVPMDENAAIARVPGMPPPWDAVWDAADL---FPVLNPARP 299
Query: 56 CMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDI-- 113
+N+++ V LQ+ ++ ++C + + +SAL+ Y + + ++ V I
Sbjct: 300 TVNAAHAVGRSGLQLFLKELLRAEQLCALVPMS---YSALWAPYNILDEHRFFVGVHISS 356
Query: 114 ----VAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYID-PSKP------ 162
+AA + + WKG+VES+ R +E + + P+P +D P +
Sbjct: 357 EHQSLAACEEAINAWKGYVESKLRMFVYALE----CVAEVRPFPRPVVDEPPRAVTRRGV 412
Query: 163 ---CPNSAFFWGL 172
C + AFF+G+
Sbjct: 413 TVHCRSRAFFFGV 425
>gi|342180300|emb|CCC89777.1| putative polynucleotide adenylyltransferase [Trypanosoma congolense
IL3000]
Length = 356
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 29/209 (13%)
Query: 1 MLVSRFFRVYTQWR----WPNPVMMCPI--EMGEL-GF-SVWDPRKNPKDRSHRMPIITP 52
+L+ FF YTQW +PV + G + G W P KN R P+I+P
Sbjct: 105 VLLRFFFLFYTQWMSRHDHISPVYLTATLESRGRIPGLPESWKPAKNECFRD-LFPVISP 163
Query: 53 AYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVD 112
AY +N + V L+ + + R+ + E L+ Y E + ++L V+
Sbjct: 164 AYPYVNDASNVGRCGLESLYSEITQAQRVISASDTLSLE--KLWRPYCIMEDFAHFLLVE 221
Query: 113 IVA-----ADADDLLT-WKGWVESRFRQLTLKIEQDTNGLLQCHPYPNK--------YID 158
+ + ADA+ +L W +V S+ R L +E+ + P+P+K ++D
Sbjct: 222 VSSLGDDMADAERILGRWGSYVGSKLRFLIYSVER----FVHARPHPHKLRAKMDGTFVD 277
Query: 159 PSKPCPNSAFFWGLSRKEVGTSKECQQFD 187
C + F G+ K G+S FD
Sbjct: 278 RKVCCSSIYFLIGVRSKNSGSSLRRCMFD 306
>gi|294895248|ref|XP_002775109.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239881038|gb|EER06925.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 413
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 4/40 (10%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPI----EMGELGFSVWDPR 37
LV RFF + ++W W NPV +CPI E+G + F VW+P+
Sbjct: 266 LVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPK 305
>gi|344256545|gb|EGW12649.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 349
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 15/223 (6%)
Query: 70 VMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVE 129
VM E+ + G I +EI L KAEWS LFE FF+ Y++Y+ + A L VE
Sbjct: 2 VMVEELKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAHTEKQRLECVDLVE 61
Query: 130 SRFRQLTLKIEQDT-NGLLQCHP--YPNKYIDPSKPCPNSAFFWGLSRKEVGTSKECQ-- 184
S+ L +E++ L +P +P +P K + + GL K+ S+
Sbjct: 62 SKICILVGSLEKNEFIKLAHVNPQSFPAPKDNPDKEEFRTMWVIGLVFKKTENSENLSVD 121
Query: 185 -QFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFNEQS 243
+D Q N ++ I +V R+ L + PS ++
Sbjct: 122 LTYDIQSFTDTVYSQAINSKMFELDMKIAAMHVKRKQLHQLL---------PSHMLQKRK 172
Query: 244 GKPCEDVKMCQSCSSERQLKRKKEHEIKEVRPDKSVKQAFISS 286
E VK+ S L ++ + P ++K + ++S
Sbjct: 173 KHSTEGVKLTALNDSTLDLSMDSDNSMSVPSPTSAMKTSPLNS 215
>gi|407410523|gb|EKF32925.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 285
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 15/156 (9%)
Query: 34 WDPRKNPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWS 93
WDPR++ R +P+I PAY +N + VS L+V + +R+ E
Sbjct: 77 WDPRRD-ACRDDLLPVINPAYPYVNDARNVSRCGLEVFYAELTYAHRLLSNSE---TPLE 132
Query: 94 ALFEHYPFFEAYENYLQVDIVAADADD------LLTWKGWVESRFRQLTLKIEQDTNGLL 147
+++ + + Y + V++ + + L W +V S+ R L +E+ ++
Sbjct: 133 TIWKPFNILDNYSTFFVVNVTCEEETEEKLEAVLSVWSSYVLSKLRILLYALER----IV 188
Query: 148 QCHPYPNKYID-PSKPCPNSAFFWGLSRKEVGTSKE 182
PYP K D P + P S F S VG ++
Sbjct: 189 DARPYPQKLNDVPLRSVPKSGCFLKGSSFIVGIREK 224
>gi|294943027|ref|XP_002783739.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239896395|gb|EER15535.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 274
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 21/130 (16%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGEL----GF---SVW--DPRKNPKDR-----SHRM 47
LV RFFRVY++W W + E GF VW P++ D+ + M
Sbjct: 145 LVVRFFRVYSRWNWDPSEGAVVLRHSEQRNGEGFQHHKVWCPPPKRTTTDQPLPLAASPM 204
Query: 48 PIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEE--IELGKAE-WSALFEHYPFFE- 103
+ITPAY MNS++ V+ ++ + ++ + G I ++L E W L E FF+
Sbjct: 205 AVITPAYPSMNSTFGVTRMSMDTIKKELERGAGIISSKGVDLRSRECWETLLEPIHFFDY 264
Query: 104 ---AYENYLQ 110
Y+ +LQ
Sbjct: 265 DQGGYKQFLQ 274
>gi|434384462|ref|YP_007095073.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
gi|428015452|gb|AFY91546.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
Length = 1037
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 15/160 (9%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L++ FF++ +Q W I + ELG K P+D +PII+ C N++
Sbjct: 818 LLANFFQILSQHNWRQT-----IALTELGKQ--HQVKLPQDL---LPIISSIEPCKNTAR 867
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADDL 121
++ T +++ ++F I I +GK W++L+E L ++I+ D
Sbjct: 868 NITRSTAKILRDEFARAAEISTNILVGKDAWTSLYEPIDLTIGTNALLSIEILDTDEQCR 927
Query: 122 LTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSK 161
+ES LT+++EQ L PN I S+
Sbjct: 928 QKCSDLLESTIIGLTIQLEQ-----LDVFVRPNPQISTSE 962
>gi|154417414|ref|XP_001581727.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121915957|gb|EAY20741.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 467
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 94/221 (42%), Gaps = 23/221 (10%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
ML+ FF ++ W W + ++ F + DP M ++T +Y +NS
Sbjct: 248 MLIFHFFEYFSSWDWD---IQLNLDSNTPDFQLNDP----------MILMTQSYPQINSL 294
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
V+ + + + ++ Q ++ + W LF+ FF Y +L +D++ ++
Sbjct: 295 RAVTTSSRKRIIKELQRALETTKKALISDLSWQELFKGGCFFADYRYFLCIDLIPTNSQI 354
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKEVGTS 180
G++ S+ +L +KI ++ G+ + + +P+K K F+ GL+ K S
Sbjct: 355 KDEIIGFLSSKLTRL-VKILEEIPGICEANIWPSKISYGGKII----FYIGLNTK----S 405
Query: 181 KECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHL 221
+ + D NF I + + + I F + ++ L
Sbjct: 406 GQSKTIDINHAKNNFISYISSSTLGK-AMSINFKIIRKKEL 445
>gi|297726257|ref|NP_001175492.1| Os08g0278750 [Oryza sativa Japonica Group]
gi|255678316|dbj|BAH94220.1| Os08g0278750, partial [Oryza sativa Japonica Group]
Length = 103
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 8/48 (16%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEM--GELGFSVWDPRKNPKDRSHR 46
ML+ RFFRV+ +W+WP+PVM+C IE GELG +++P R HR
Sbjct: 40 MLLPRFFRVFARWKWPSPVMLCAIEHDDGELGL-----KRHPA-RHHR 81
>gi|361066261|gb|AEW07442.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142733|gb|AFG52754.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142735|gb|AFG52755.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142737|gb|AFG52756.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142739|gb|AFG52757.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142741|gb|AFG52758.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142743|gb|AFG52759.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142745|gb|AFG52760.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142747|gb|AFG52761.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142749|gb|AFG52762.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142751|gb|AFG52763.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142753|gb|AFG52764.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142755|gb|AFG52765.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142757|gb|AFG52766.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142759|gb|AFG52767.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
Length = 104
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 184 QQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFNEQS 243
+QFD + TV FR + Y + + G +I S++ RR +PSFVFP G + R ++ + +
Sbjct: 2 EQFDIRVTVDEFRHSVKMYTLWKPGMEINVSHIKRRSIPSFVFPGGVRPPRTTK-MSGTA 60
Query: 244 GKP 246
G+P
Sbjct: 61 GRP 63
>gi|342879986|gb|EGU81216.1| hypothetical protein FOXB_08249 [Fusarium oxysporum Fo5176]
Length = 1207
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 91/225 (40%), Gaps = 47/225 (20%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYH--CMNS 59
+V FF Y+++ W N ++ P EL + +R+ R P+ +H +N+
Sbjct: 825 IVVTFFHYYSEFDWKNSMVFDPFFHKELRY----------NRTFREPLCLIGWHAPALNT 874
Query: 60 SYKVSLGTLQVMTEQFQCGNRICE--------------EIELGKAEWSALFEHYPFFEAY 105
+ S+ T+ ++ +F R+ E LG + A E F A+
Sbjct: 875 APIASIPTVATISSEFGRAKRMLSDDDCIWGKLLGIEPETALGSVQAPAATE---FLHAF 931
Query: 106 ENYLQVDIV--AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPC 163
+ Y+++D + + GW+ESR L + I + LL +P++++D S
Sbjct: 932 KTYIKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDINRKLKHLL-ARIWPSRFLDVSAGA 990
Query: 164 PNSA------FFWGLS---------RKEVGTSKECQQFDFQGTVK 193
S + GL+ KEVG + + DF+ ++
Sbjct: 991 ETSGAEYHGCYLIGLAWDDDSNKEDAKEVGMAMQTVLQDFEARIR 1035
>gi|71409419|ref|XP_807056.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70870970|gb|EAN85205.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 285
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 15/156 (9%)
Query: 34 WDPRKNPKDRSHRMPIITPAYHCMNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWS 93
WDPR++ R +P+I PAY +N + V L+V + R+ +E
Sbjct: 77 WDPRRD-ACRDDLLPVINPAYPYVNDARNVGRCGLEVFYAELTYAYRLLSNLE---TPLE 132
Query: 94 ALFEHYPFFEAYENYLQVDIVAADADD------LLTWKGWVESRFRQLTLKIEQDTNGLL 147
++E Y + Y + V + + ++ L W +V S+ R L +E+ ++
Sbjct: 133 TIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSKLRILLYALER----IV 188
Query: 148 QCHPYPNKYID-PSKPCPNSAFFWGLSRKEVGTSKE 182
PYP K D P + P F S VG ++
Sbjct: 189 DARPYPQKLNDVPPRSVPKPGRFLKGSCFIVGIKEK 224
>gi|238583172|ref|XP_002390161.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
gi|215453244|gb|EEB91091.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
Length = 309
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPK 41
+VSRFF + QW WP PV++ IE G L VW+P+ K
Sbjct: 250 IVSRFFIIMYQWTWPQPVLLKQIEEGPLQVRVWNPKVRVK 289
>gi|440294386|gb|ELP87403.1| polyA polymerase, putative [Entamoeba invadens IP1]
Length = 482
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 17/177 (9%)
Query: 2 LVSRFFRVYTQWRWP-NPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
L+ +FF Y W W NPVM LG S D R K + + +ITPA NS
Sbjct: 233 LLEKFFHAYATWDWARNPVM--------LGVS--DDRPERK-KEEMVQVITPAAPRENSM 281
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIEL-GKAEWSALFEHYPFFEAYENYLQVDIVAADAD 119
Y ++ +L+++ + G RI + + G +W+ LF+ F Y +++ V +
Sbjct: 282 YNMTRSSLELLKREMLRGERIVKGYKSEGGNDWNLLFKKRHCFCGYYIFVEFS-VRGSLE 340
Query: 120 DLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCPNSAFFWGLSRKE 176
L G ES+ + +E+ +++ + P Y++ ++ G++ K+
Sbjct: 341 SLENKIGMFESKIVRFVRSLEE-MEEVIEVNVIPEGYLEVENAV--DYYYVGMNVKK 394
>gi|55726267|emb|CAH89905.1| hypothetical protein [Pongo abelii]
Length = 304
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPR 37
LV +FF V+++W WPNPV++ E L VWDPR
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|187469283|gb|AAI67010.1| Papola protein [Rattus norvegicus]
Length = 317
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPR 37
LV +FF V+++W WPNPV++ E L VWDPR
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|119602052|gb|EAW81646.1| poly(A) polymerase alpha, isoform CRA_d [Homo sapiens]
Length = 317
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPR 37
LV +FF V+++W WPNPV++ E L VWDPR
Sbjct: 268 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|1377872|gb|AAC52609.1| poly(A) polymerase V, partial [Mus musculus]
Length = 303
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPR 37
LV +FF V+++W WPNPV++ E L VWDPR
Sbjct: 254 LVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 289
>gi|384485719|gb|EIE77899.1| hypothetical protein RO3G_02603 [Rhizopus delemar RA 99-880]
Length = 494
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
Query: 1 MLVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSS 60
M++SRFF +++QW W PVM+ G G + D + MPI++P + N +
Sbjct: 240 MILSRFFSMWSQWPWQMPVMLTDYIPGINGTKIEYNSLAEFDNA-VMPIVSPCHPVCNVA 298
Query: 61 YKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAADADD 120
V+ T ++M +F+ G + + A LF + + Y++++ + +
Sbjct: 299 PYVTKSTRRIMQIEFERGWTLLNKNAHPFAIIDKLFNPVNYTQRYKHFINIVTSSTTITS 358
Query: 121 LLTWKGWVESRFRQLTLKIEQDTNGLLQCHP 151
TW + ++ + IE D N +LQ P
Sbjct: 359 HDTWVRKMATQIPRYLELIESDPN-ILQAQP 388
>gi|403371755|gb|EJY85762.1| hypothetical protein OXYTRI_16252 [Oxytricha trifallax]
Length = 771
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 33/125 (26%)
Query: 5 RFFRVYTQWRWPNPVMMCPIEMGELGF-------------------SVWDPRKNPKDRSH 45
+FF+ Y+ W WPNP+++ + GF +W+P D H
Sbjct: 558 KFFKFYSSWEWPNPIIL------DQGFYDQENLLNPNGQQVKMNVKKIWNPISCIGDSQH 611
Query: 46 RMPIITPAYHC--------MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFE 97
MPII+P N++ +V LQ+ +F+ +I ++I GK + L
Sbjct: 612 LMPIISPQIKINTQKTITSTNTADQVLNSNLQIYLYEFKRAYKIMKKIYKGKIKLKELGS 671
Query: 98 HYPFF 102
+ F
Sbjct: 672 AFESF 676
>gi|294939632|ref|XP_002782536.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239894204|gb|EER14331.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 157
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 9/97 (9%)
Query: 92 WSALFEHYPFFEAYENYLQVDIVAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHP 151
W+ L +PFF+ Y +L ++I A L +KG VESR R L +E + P
Sbjct: 20 WADLCAPFPFFQVYRQFLLLEISAETEKAFLKFKGLVESRIRVLVKNLETCCGHKVLPQP 79
Query: 152 YPNKY---------IDPSKPCPNSAFFWGLSRKEVGT 179
+P + I P AF G++ + T
Sbjct: 80 HPVMFPRGPLGADAIPGEAPTFLGAFVLGITFDHIAT 116
>gi|442319649|ref|YP_007359670.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
gi|441487291|gb|AGC43986.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
Length = 1016
Score = 42.7 bits (99), Expect = 0.23, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 52/143 (36%), Gaps = 12/143 (8%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHCMNSSY 61
L++ FF+ + W WP PV + G P + MP+I PA N++
Sbjct: 813 LLAHFFQTFASWPWPQPVALTQETAG----------YRPDGKRDLMPVIAPAEPLRNTAR 862
Query: 62 KVSLGTLQVMTEQFQCGNRICEEIELGKA--EWSALFEHYPFFEAYENYLQVDIVAADAD 119
VS T + + E+ + + W LF+ L++ + A +
Sbjct: 863 NVSRSTFRTVREELVRARELVTGARASSSPHAWEPLFQPVDAPRDLPARLRLSVEAPTPE 922
Query: 120 DLLTWKGWVESRFRQLTLKIEQD 142
GWV L ++E D
Sbjct: 923 AHEAAMGWVLGHLTALVYRLEGD 945
>gi|451855249|gb|EMD68541.1| hypothetical protein COCSADRAFT_178345 [Cochliobolus sativus ND90Pr]
Length = 1226
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 88/209 (42%), Gaps = 51/209 (24%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPK-DRSHRMPIITPAYHCMNSS 60
+V FF+ Y + W N ++ + + +K P+ +RS R P++ ++H NS+
Sbjct: 840 IVVSFFQHYANFDWSN----------DMVYDAFFHKKKPRYNRSTREPMVILSFHAPNSN 889
Query: 61 Y--KVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEH--------------YPFFEA 104
+ K ++ LQ++ ++F+ + E + W F F A
Sbjct: 890 FAQKSTVPGLQMLIKEFKAADMKLSEPGM---TWQKFFSTSSDLALKPCLPSGVVEFLNA 946
Query: 105 YENYLQVDI-----VAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDP 159
Y +++++DI + A L+ GWVESR + + I + G + +P + D
Sbjct: 947 YSDFVKIDIQFWGRMLAKGKGLV---GWVESRCISIVVDIHKALPG-SEVRVWPALFTDD 1002
Query: 160 SKPCPNSA---------FFWGLSRKEVGT 179
+ PN + + GLS+ G+
Sbjct: 1003 A---PNDSTDSNDFQGCYLIGLSKAAEGS 1028
>gi|302499068|ref|XP_003011530.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
gi|291175082|gb|EFE30890.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
Length = 1209
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 36/163 (22%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHC--MNS 59
LVS FF Y + W N +++ P + RS R P++ H +N
Sbjct: 826 LVSMFFHYYAHFDWKNNMVVSP------------GVQTRYRRSLREPMVILTVHVPTINV 873
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYP-----------FFEAYENY 108
+ V+ +L+ + F NR E + A WS + F AY +Y
Sbjct: 874 ARAVTAPSLRTIVSAF---NRAEELMGEDGARWSNILNDISISHNNQTGAEKFLTAYNSY 930
Query: 109 LQVDI-----VAADADDLLTWKGWVESRFRQLTLKIEQDTNGL 146
++V++ A L+ GW+ESRF +L +++ G+
Sbjct: 931 IKVNVQYWGPSPTQASSLI---GWLESRFFRLLNDLDRQALGI 970
>gi|212536855|ref|XP_002148583.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
gi|210068325|gb|EEA22416.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
Length = 1206
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 96/234 (41%), Gaps = 36/234 (15%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYH--CMNS 59
++S FF Y + W N ++ E F P+ + R R P++ + H +N
Sbjct: 821 IISDFFFYYENFDWKNDMVY------ETTFYTGTPKYH---RLSREPMVILSIHPPKVNV 871
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFE---HYPFFEAYENYLQVDI--- 113
++ ++ ++ + ++F+ ++ E+ A W + + F EAY +Y++VD+
Sbjct: 872 AHASTVSSVHTLEQEFKRAAQLISEV---GATWKNIADPSGVVQFLEAYSSYIKVDVHYW 928
Query: 114 --VAADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHP--YPNKYIDPSKPCP----- 164
AA L GW+E R L + I + G H +P ++ D +
Sbjct: 929 AKAAAKGRALF---GWLEFRCVSLLVNINR---GFPDIHARIWPARFTDMEEEVIESMEE 982
Query: 165 -NSAFFWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVC 217
GLS+ E +++ + D + + ++ + + G + YF C
Sbjct: 983 YQGCLLIGLSKSEQTSTRSPNEPDRRSAHISLLSLLEKFAEQIRGNETYFDKSC 1036
>gi|320166045|gb|EFW42944.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1251
Score = 40.4 bits (93), Expect = 0.98, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 21/145 (14%)
Query: 2 LVSRFFRVYTQWRWPNPVMM-----CPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHC 56
L+ FF W WP P+++ + +G SV MP++TP +
Sbjct: 1010 LMHAFFVHVANWPWPQPILLNMPLGATLPADAIGESV-------------MPVMTPTWPT 1056
Query: 57 MNSSYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDIVAA 116
NS+ VS+ TL VM + Q G + + A A+ + + L V +
Sbjct: 1057 RNSARVVSVSTLSVMRAELQRGADLTAAADCSLA---AVADPLGVSTLAKGILVVQLQCL 1113
Query: 117 DADDLLTWKGWVESRFRQLTLKIEQ 141
+ +L GW+ SR L ++E+
Sbjct: 1114 NKSELERGAGWLLSRLGVLVHELER 1138
>gi|242810869|ref|XP_002485671.1| DUF455 domain protein [Talaromyces stipitatus ATCC 10500]
gi|218716296|gb|EED15718.1| DUF455 domain protein [Talaromyces stipitatus ATCC 10500]
Length = 1206
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/229 (17%), Positives = 93/229 (40%), Gaps = 26/229 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYH--CMNS 59
++ FF Y + W N ++ + + +P+ + RS R P++ + H +N
Sbjct: 821 ILCTFFSYYAHFDWKNDLVY------DTTYYTVEPKYH---RSSREPLVILSIHPPKVNV 871
Query: 60 SYKVSLGTLQVMTEQFQCGNRICEEIELGKAEWSALFEHYPFFEAYENYLQVDI-----V 114
++ ++ +++ + E+F NR+ + + + + Y F AY +Y++VD+
Sbjct: 872 AHASTVPSVKTLEEEFDRANRLISKAGVSWEDIAGQTGIYQFLNAYPSYIKVDVQYWAKA 931
Query: 115 AADADDLLTWKGWVESRFRQLTLKIEQDTNGLLQCHPYPNKYIDPSKPCP------NSAF 168
A L GW+E R L + I + + +P ++ + + F
Sbjct: 932 VAKGRALF---GWLEFRCVSLLVDINRRFAN-VHARIWPARFTNMKEEDTEDMEEYQGCF 987
Query: 169 FWGLSRKEVGTSKECQQFDFQGTVKNFRRGIDNYRVRREGRDIYFSYVC 217
GL+R E +++ + D + + + + + + YF C
Sbjct: 988 LIGLARNEQPSTESATESDRKSAHVSLLSLLKKFAEQIRADETYFDQSC 1036
>gi|226500652|ref|NP_001146769.1| uncharacterized protein LOC100280371 [Zea mays]
gi|219888671|gb|ACL54710.1| unknown [Zea mays]
Length = 214
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 202 YRVRREGRDIYFSYVCRRHLPSFVFPDGYKWHRPSRHFNEQSGKPCEDVKMCQSCSSERQ 261
Y + + G D+ ++V R +PS+VF GYK P+ H N+Q D S E Q
Sbjct: 2 YSLWKPGMDLAVTHVHREQVPSYVFEQGYKKPCPTMHANQQEQS---DGDGTFSPYLESQ 58
Query: 262 LKRKKEHEIK-EVRPDKSVKQAFIS 285
LKRK + V KSVK+A +S
Sbjct: 59 LKRKYISDGDGHVDLCKSVKRASVS 83
>gi|407922599|gb|EKG15696.1| Endonuclease/exonuclease/phosphatase [Macrophomina phaseolina MS6]
Length = 1142
Score = 38.1 bits (87), Expect = 6.0, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 63/151 (41%), Gaps = 17/151 (11%)
Query: 2 LVSRFFRVYTQWRWPNPVMMCPIEMGELGFSVWDPRKNPKDRSHRMPIITPAYHC--MNS 59
LV FFR Y ++ W + P+ G P R P++ YH +N
Sbjct: 763 LVCAFFRYYAEFDWSKNTVEDPLARAIPGMG------RPYQRHASEPMVVLGYHIPRVNI 816
Query: 60 SYKVSLGTLQVMTEQFQCGNR-ICEEIELGKA-EWSALF-----EHYPFFEAYENYLQVD 112
+ ++ + V+TE+ Q + + ++ E G W+ + F AY +Y++VD
Sbjct: 817 ARAATVPAVGVLTEELQRAHALVTKQPEQGSTPTWAEIIGEERNSAAEFLSAYRSYIRVD 876
Query: 113 IVAADADDLLTWK--GWVESRFRQLTLKIEQ 141
+ + + GWVESR L + + +
Sbjct: 877 VQYWGTSSVKGRQLIGWVESRCPTLLIDLNR 907
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.135 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,560,095,966
Number of Sequences: 23463169
Number of extensions: 239268582
Number of successful extensions: 480074
Number of sequences better than 100.0: 721
Number of HSP's better than 100.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 478791
Number of HSP's gapped (non-prelim): 769
length of query: 322
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 180
effective length of database: 9,027,425,369
effective search space: 1624936566420
effective search space used: 1624936566420
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)