BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020702
(322 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224098028|ref|XP_002311109.1| global transcription factor group [Populus trichocarpa]
gi|222850929|gb|EEE88476.1| global transcription factor group [Populus trichocarpa]
Length = 370
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/294 (68%), Positives = 233/294 (79%), Gaps = 12/294 (4%)
Query: 27 SASLLQFFVRQARSF---ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 83
+A +Q +RQ + ITQHKWAWPFM PVDV+GLGLHDYYEVI+KPMDFSTIKN+M+
Sbjct: 83 AAKRMQELMRQFGTILRQITQHKWAWPFMQPVDVKGLGLHDYYEVIDKPMDFSTIKNQME 142
Query: 84 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
KDGTGY++VREI ADVRLVFKNAMKYNDER DVHVMAK+LL KFEEKWLQ LPKV EEE
Sbjct: 143 AKDGTGYKSVREICADVRLVFKNAMKYNDERSDVHVMAKTLLGKFEEKWLQFLPKVTEEE 202
Query: 144 KRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKK 203
KR+EEEEA+AQLDMQL QEA A++L +EL EVDM LE LRE V+QKCRKMSTEEK+
Sbjct: 203 KRREEEEAEAQLDMQLAQEAAHAKMARDLGNELYEVDMHLEELREMVVQKCRKMSTEEKR 262
Query: 204 NLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKA 263
LG ALTRLSPEDL KALEIVA+NNP F ATA+EVDLD+DAQSE TLWRLK FV+++L+
Sbjct: 263 KLGAALTRLSPEDLTKALEIVAQNNPGFQATAEEVDLDIDAQSETTLWRLKFFVKDALEV 322
Query: 264 ASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRTKK 317
+S+ GG NN + N NN KRK+EICDA+AK A KR+KK
Sbjct: 323 QGKSAASAGGRNNTT---------TPSNNNNNNNKRKREICDAIAKTAKKRSKK 367
>gi|449452116|ref|XP_004143806.1| PREDICTED: transcription factor GTE1-like [Cucumis sativus]
gi|449485919|ref|XP_004157310.1| PREDICTED: transcription factor GTE1-like [Cucumis sativus]
Length = 378
Score = 367 bits (941), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 190/268 (70%), Positives = 224/268 (83%), Gaps = 8/268 (2%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
I+QHKWAWPFM PVDVEGLGLHDYYEVI+KPMDFSTIKN+M+ KDGTGY+NVREI +DVR
Sbjct: 108 ISQHKWAWPFMQPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICSDVR 167
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
LVFKNAMKYNDER DVHVMAK+LL KFEEKWLQLLPKV EEEKR+E+EEA+A LDMQL Q
Sbjct: 168 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREDEEAEALLDMQLAQ 227
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKAL 221
EA Q A+++ +E+ EVDMQLE LRE V+Q CRK+STEEK+ LG ALT+LSPED+ KAL
Sbjct: 228 EAAQAKMARDISNEIYEVDMQLEELRELVVQNCRKISTEEKRKLGAALTKLSPEDISKAL 287
Query: 222 EIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDD 281
EIVAENNPSF ATA+EVDLD+DAQSE TLWRLK FV+++L+ ++SS GG NN N+
Sbjct: 288 EIVAENNPSFQATAEEVDLDIDAQSESTLWRLKFFVKDALEVHAKSSASTGGGNNQNH-- 345
Query: 282 NNNEKDNSNKKNKNNPKRKKEICDALAK 309
++ +N KRKKEICDA+A+
Sbjct: 346 ------TNSNNINSNNKRKKEICDAIAR 367
>gi|356565711|ref|XP_003551081.1| PREDICTED: uncharacterized protein LOC100797746 [Glycine max]
Length = 738
Score = 367 bits (941), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 189/267 (70%), Positives = 218/267 (81%), Gaps = 18/267 (6%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
ITQHKWAWPFM PVD+EGLGLHDYYEVI+KPMDFSTIKN+M+ KDGTGY++VREI ADVR
Sbjct: 480 ITQHKWAWPFMQPVDIEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKHVREICADVR 539
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
LVFKNAMKYNDER DVHVMAK+LL KFEEKWLQLLPKV EEE R+EEEEA+AQL +Q+ Q
Sbjct: 540 LVFKNAMKYNDERSDVHVMAKTLLSKFEEKWLQLLPKVTEEETRREEEEAEAQLALQVAQ 599
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKAL 221
EA Q A++L +EL EVD+ LE LRE V+++ RKMSTEEK+ LG ALTRLSPEDL KAL
Sbjct: 600 EAAQAKMARDLSNELYEVDVILEELREMVVKRFRKMSTEEKRKLGDALTRLSPEDLSKAL 659
Query: 222 EIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDD 281
EIVA+NNPSF ATA+EVDLDMDAQSE TLWRLK FV+E+L+ ++SG MGGN N NN
Sbjct: 660 EIVAQNNPSFQATAEEVDLDMDAQSESTLWRLKFFVKEALEVQGKNSGSMGGNENQNN-- 717
Query: 282 NNNEKDNSNKKNKNNPKRKKEICDALA 308
KRK+E+CDA+A
Sbjct: 718 ----------------KRKRELCDAIA 728
>gi|255577689|ref|XP_002529721.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223530823|gb|EEF32687.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 391
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 193/276 (69%), Positives = 227/276 (82%), Gaps = 6/276 (2%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
ITQHKWAWPFM PVDV+GLGLHDYYEVI+KPMDFSTIKN+M+ KDGTGY+NVREI ADVR
Sbjct: 119 ITQHKWAWPFMQPVDVKGLGLHDYYEVIDKPMDFSTIKNQMETKDGTGYKNVREICADVR 178
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
LVFKNAMKYNDER DVHVMAK+LL KFEEKWLQLLPKV EEEKR+E EEA+AQLDMQL Q
Sbjct: 179 LVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREMEEAEAQLDMQLAQ 238
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKAL 221
EAV A+EL +EL E+D L+ LR+ V+QKCRK+STEEK+ LG ALTRLSPEDL KAL
Sbjct: 239 EAVHAKMARELSNELYEIDTHLDELRDMVVQKCRKISTEEKRKLGAALTRLSPEDLTKAL 298
Query: 222 EIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDD 281
EIVA+NNP F ATA+EVDLD+DAQ+E TLWRLK FV+++L+ +++ + ++
Sbjct: 299 EIVAQNNPGFQATAEEVDLDIDAQTESTLWRLKFFVKDALEVQGKNA------ASAGGNN 352
Query: 282 NNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRTKK 317
NNN + + N +N KRKKEICDA+AK A KR KK
Sbjct: 353 NNNNSNTTTNNNNSNNKRKKEICDAIAKTAKKRNKK 388
>gi|30686240|ref|NP_181036.2| Transcription factor GTE6 [Arabidopsis thaliana]
gi|75148956|sp|Q84XV2.1|GTE1_ARATH RecName: Full=Transcription factor GTE1; AltName:
Full=Bromodomain-containing protein GTE1; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E1;
AltName: Full=Protein IMBIBITION-INDUCIBLE 1
gi|27803868|gb|AAO22056.1| IMB1 [Arabidopsis thaliana]
gi|110741364|dbj|BAF02232.1| RING3 protein-like [Arabidopsis thaliana]
gi|111074406|gb|ABH04576.1| At2g34900 [Arabidopsis thaliana]
gi|330253943|gb|AEC09037.1| Transcription factor GTE6 [Arabidopsis thaliana]
Length = 386
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 176/291 (60%), Positives = 226/291 (77%), Gaps = 12/291 (4%)
Query: 27 SASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 86
S L++ F R I QHKWAWPF+ PVDV+GLGLHDYY+VIEKPMD TIK KM+ +
Sbjct: 107 SPDLMRQFATMFRQ-IAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSE 165
Query: 87 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQ 146
Y NVREIYADVRLVFKNAM+YN+E++DV+VMA+SLLEKFEEKWL ++PK++EEEK+Q
Sbjct: 166 ---YSNVREIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQ 222
Query: 147 EEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLG 206
+EEA+ + QLT EA Q A++L +EL E+D+QLE LRE+V+Q+CRK+ST+EKK L
Sbjct: 223 VDEEAEKHANKQLTMEAAQAEMARDLSNELYEIDLQLEKLRESVVQRCRKLSTQEKKGLS 282
Query: 207 TALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 266
AL RLSPEDL KAL++V+E+NPSF A A EV+LD+D Q+++TLWRLKVFVQE+LKAA++
Sbjct: 283 AALGRLSPEDLSKALKMVSESNPSFPAGAPEVELDIDVQTDVTLWRLKVFVQEALKAANK 342
Query: 267 SSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRTKK 317
SSG NNNN + + NKNN KR++EI DA+ K ++KR KK
Sbjct: 343 SSGGTNAQNNNNT--------GTGEINKNNAKRRREISDAINKASIKRAKK 385
>gi|62321808|dbj|BAD95432.1| RING3 protein-like [Arabidopsis thaliana]
Length = 386
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 176/291 (60%), Positives = 225/291 (77%), Gaps = 12/291 (4%)
Query: 27 SASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 86
S L++ F R I QHKWAWPF+ PVDV+GLGLHDYY+VIEKPMD TIK KM+ +
Sbjct: 107 SPDLMRQFATMFRQ-IAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSE 165
Query: 87 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQ 146
Y NVREIYADVRLVFKNAM+YN+E++DV+VMA+SLLEKFEEKWL ++PK++EEEK+Q
Sbjct: 166 ---YSNVREIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQ 222
Query: 147 EEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLG 206
+EEA+ + QLT EA Q A++L +EL E+D+QLE LRE+V+Q+CRK+ST+EKK L
Sbjct: 223 VDEEAEKHANKQLTMEAAQAEMARDLSNELYEIDLQLEKLRESVVQRCRKLSTQEKKGLS 282
Query: 207 TALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 266
AL RLSPEDL KAL++V+E+NPSF A A EV LD+D Q+++TLWRLKVFVQE+LKAA++
Sbjct: 283 AALGRLSPEDLSKALKMVSESNPSFPAGAPEVGLDIDVQTDVTLWRLKVFVQEALKAANK 342
Query: 267 SSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRTKK 317
SSG NNNN + + NKNN KR++EI DA+ K ++KR KK
Sbjct: 343 SSGGTNAQNNNNT--------GTGEINKNNAKRRREISDAINKASIKRAKK 385
>gi|42571057|ref|NP_973602.1| Transcription factor GTE6 [Arabidopsis thaliana]
gi|330253942|gb|AEC09036.1| Transcription factor GTE6 [Arabidopsis thaliana]
Length = 276
Score = 357 bits (916), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 172/276 (62%), Positives = 220/276 (79%), Gaps = 11/276 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
I QHKWAWPF+ PVDV+GLGLHDYY+VIEKPMD TIK KM+ + Y NVREIYADVR
Sbjct: 11 IAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSE---YSNVREIYADVR 67
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
LVFKNAM+YN+E++DV+VMA+SLLEKFEEKWL ++PK++EEEK+Q +EEA+ + QLT
Sbjct: 68 LVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQVDEEAEKHANKQLTM 127
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKAL 221
EA Q A++L +EL E+D+QLE LRE+V+Q+CRK+ST+EKK L AL RLSPEDL KAL
Sbjct: 128 EAAQAEMARDLSNELYEIDLQLEKLRESVVQRCRKLSTQEKKGLSAALGRLSPEDLSKAL 187
Query: 222 EIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDD 281
++V+E+NPSF A A EV+LD+D Q+++TLWRLKVFVQE+LKAA++SSG NNNN
Sbjct: 188 KMVSESNPSFPAGAPEVELDIDVQTDVTLWRLKVFVQEALKAANKSSGGTNAQNNNNT-- 245
Query: 282 NNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRTKK 317
+ + NKNN KR++EI DA+ K ++KR KK
Sbjct: 246 ------GTGEINKNNAKRRREISDAINKASIKRAKK 275
>gi|297826963|ref|XP_002881364.1| imbibition-inducible 1 [Arabidopsis lyrata subsp. lyrata]
gi|297327203|gb|EFH57623.1| imbibition-inducible 1 [Arabidopsis lyrata subsp. lyrata]
Length = 386
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 175/291 (60%), Positives = 224/291 (76%), Gaps = 12/291 (4%)
Query: 27 SASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 86
S L++ F R I QHKWAWPF+ PVDV+GLGLHDYY+VIEKPMD TIK KM+ +
Sbjct: 107 SPDLMRQFATMFRQ-IAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSE 165
Query: 87 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQ 146
Y NVREIYADVRLVFKNAM+YN+E++DV+VMA+SLLEKFEEKWL ++PK++EEEK+Q
Sbjct: 166 ---YSNVREIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQ 222
Query: 147 EEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLG 206
+EEA+ + QLT EA Q A++L +EL E+D+QLE LRE+V+Q+CRK+ST+EKK L
Sbjct: 223 ADEEAEKHANKQLTLEAAQAEMARDLSNELYEIDLQLERLRESVVQRCRKLSTQEKKGLS 282
Query: 207 TALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 266
AL RLSPEDL KAL++V+E+NPSF A A EV+LD+D Q+++TLWRLKVFVQE+LKAA++
Sbjct: 283 AALGRLSPEDLSKALKMVSESNPSFPAGAPEVELDIDVQTDVTLWRLKVFVQEALKAANK 342
Query: 267 SSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRTKK 317
SG NNNN + + NKNN KR++EI DA+ K + KR KK
Sbjct: 343 GSGGTNAQNNNNT--------GTGEINKNNAKRRREISDAINKASTKRAKK 385
>gi|359486529|ref|XP_002276963.2| PREDICTED: transcription factor GTE1-like [Vitis vinifera]
Length = 440
Score = 353 bits (906), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 189/282 (67%), Positives = 223/282 (79%), Gaps = 9/282 (3%)
Query: 27 SASLLQFFVRQARSF---ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 83
+A +Q +RQ + ITQHKWAWPFM PVDVEGLGLHDYYEVIEKPMDFSTIKNKM+
Sbjct: 150 AAKRMQELMRQFGTILRQITQHKWAWPFMQPVDVEGLGLHDYYEVIEKPMDFSTIKNKME 209
Query: 84 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
KDG GY+NVREI ADVRLVFKNAMKYNDER DVHVMAK+LL KFEEKWLQLLPKV EE+
Sbjct: 210 AKDGAGYKNVREICADVRLVFKNAMKYNDERRDVHVMAKTLLGKFEEKWLQLLPKVAEED 269
Query: 144 KRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKK 203
KR+EEEEA+AQLDM L QEA A+++ +EL E+DM L+++RE ++QKCRK STEEK+
Sbjct: 270 KRREEEEAEAQLDMHLAQEAAHAKMARDISNELFEIDMHLDDIREIIVQKCRKTSTEEKR 329
Query: 204 NLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKA 263
LG AL+RLS EDL KALEIVA++NPSF ATA+EV LD+DAQ E TLWRLK FV+++L+
Sbjct: 330 KLGAALSRLSAEDLSKALEIVAQSNPSFQATAEEVHLDIDAQRESTLWRLKFFVKDALEI 389
Query: 264 ASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICD 305
+SS MGGNN +N++ NN KRKKEICD
Sbjct: 390 QGKSSASMGGNNTATT------TNNNHPTTNNNSKRKKEICD 425
>gi|296086052|emb|CBI31493.3| unnamed protein product [Vitis vinifera]
Length = 362
Score = 353 bits (905), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 189/282 (67%), Positives = 223/282 (79%), Gaps = 9/282 (3%)
Query: 27 SASLLQFFVRQARSF---ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 83
+A +Q +RQ + ITQHKWAWPFM PVDVEGLGLHDYYEVIEKPMDFSTIKNKM+
Sbjct: 72 AAKRMQELMRQFGTILRQITQHKWAWPFMQPVDVEGLGLHDYYEVIEKPMDFSTIKNKME 131
Query: 84 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
KDG GY+NVREI ADVRLVFKNAMKYNDER DVHVMAK+LL KFEEKWLQLLPKV EE+
Sbjct: 132 AKDGAGYKNVREICADVRLVFKNAMKYNDERRDVHVMAKTLLGKFEEKWLQLLPKVAEED 191
Query: 144 KRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKK 203
KR+EEEEA+AQLDM L QEA A+++ +EL E+DM L+++RE ++QKCRK STEEK+
Sbjct: 192 KRREEEEAEAQLDMHLAQEAAHAKMARDISNELFEIDMHLDDIREIIVQKCRKTSTEEKR 251
Query: 204 NLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKA 263
LG AL+RLS EDL KALEIVA++NPSF ATA+EV LD+DAQ E TLWRLK FV+++L+
Sbjct: 252 KLGAALSRLSAEDLSKALEIVAQSNPSFQATAEEVHLDIDAQRESTLWRLKFFVKDALEI 311
Query: 264 ASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICD 305
+SS MGGNN +N++ NN KRKKEICD
Sbjct: 312 QGKSSASMGGNNTATT------TNNNHPTTNNNSKRKKEICD 347
>gi|359484096|ref|XP_003633062.1| PREDICTED: transcription factor GTE1-like [Vitis vinifera]
Length = 377
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 194/278 (69%), Positives = 225/278 (80%), Gaps = 12/278 (4%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
I QHKWA PF+HPVDVEGLGLHDYYEVI+KPMDFSTIKN+M+ KDGTGY+NVREI ADVR
Sbjct: 110 IMQHKWAGPFLHPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICADVR 169
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
LVFKNAMKYNDER DVHVMAK+LL KFEEKWLQLLPKV EEEKR+EEEEA+AQLDMQL Q
Sbjct: 170 LVFKNAMKYNDERHDVHVMAKTLLGKFEEKWLQLLPKVAEEEKRREEEEAEAQLDMQLAQ 229
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKAL 221
EA A+E+ +EL ++DM LE +RE VI+KCRKMSTEEK+ LG AL+RLS EDL KAL
Sbjct: 230 EAAHAKMAREISNELYDIDMHLEEVREMVIRKCRKMSTEEKRKLGAALSRLSAEDLSKAL 289
Query: 222 EIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDD 281
EIVA+NNPSF ATA+EVDLD+DAQ+E TLWRLK FV+++L+ +SS G
Sbjct: 290 EIVAQNNPSFQATAEEVDLDIDAQTESTLWRLKFFVKDALEVQGKSSASKG--------- 340
Query: 282 NNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRTKKLP 319
+ N+ NN KRKKEICDA+AK A K++KKLP
Sbjct: 341 ---DNTNTTTTATNNNKRKKEICDAIAKTAKKKSKKLP 375
>gi|147779795|emb|CAN62295.1| hypothetical protein VITISV_019973 [Vitis vinifera]
Length = 377
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 198/296 (66%), Positives = 232/296 (78%), Gaps = 15/296 (5%)
Query: 27 SASLLQFFVRQARSF---ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 83
+A +Q +RQ + I QHKWA PF+HPVDVEGLGLHDYYEVI+KPMDFSTIKN+M+
Sbjct: 92 AAKRMQELMRQFGTILRQIMQHKWAGPFLHPVDVEGLGLHDYYEVIDKPMDFSTIKNQME 151
Query: 84 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
KDGTGY+NVREI ADVRLVFKNAMKYNDER DVHVMAK+LL KFEEKWLQLLPKV EEE
Sbjct: 152 AKDGTGYKNVREICADVRLVFKNAMKYNDERHDVHVMAKTLLGKFEEKWLQLLPKVAEEE 211
Query: 144 KRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKK 203
KR+EEEEA+AQLDMQL QEA A+E+ +EL +DM LE +RE VI+KCRKMSTEEK+
Sbjct: 212 KRREEEEAEAQLDMQLAQEAAHAKMAREISNELYXIDMHLEEVREMVIRKCRKMSTEEKR 271
Query: 204 NLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKA 263
LG AL+RLS EDL KALEIVA+NNPSF ATA+EVDLD+DAQ+E TLWRLK FV+++L+
Sbjct: 272 KLGAALSRLSAEDLSKALEIVAQNNPSFQATAEEVDLDIDAQTESTLWRLKFFVKDALEV 331
Query: 264 ASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRTKKLP 319
+SS G + N+ NN KRKKEICDA+AK A K++KKLP
Sbjct: 332 QGKSSASKG------------DNTNTTTTATNNNKRKKEICDAIAKTAKKKSKKLP 375
>gi|297742702|emb|CBI35336.3| unnamed protein product [Vitis vinifera]
Length = 421
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 194/278 (69%), Positives = 225/278 (80%), Gaps = 12/278 (4%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
I QHKWA PF+HPVDVEGLGLHDYYEVI+KPMDFSTIKN+M+ KDGTGY+NVREI ADVR
Sbjct: 154 IMQHKWAGPFLHPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICADVR 213
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
LVFKNAMKYNDER DVHVMAK+LL KFEEKWLQLLPKV EEEKR+EEEEA+AQLDMQL Q
Sbjct: 214 LVFKNAMKYNDERHDVHVMAKTLLGKFEEKWLQLLPKVAEEEKRREEEEAEAQLDMQLAQ 273
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKAL 221
EA A+E+ +EL ++DM LE +RE VI+KCRKMSTEEK+ LG AL+RLS EDL KAL
Sbjct: 274 EAAHAKMAREISNELYDIDMHLEEVREMVIRKCRKMSTEEKRKLGAALSRLSAEDLSKAL 333
Query: 222 EIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDD 281
EIVA+NNPSF ATA+EVDLD+DAQ+E TLWRLK FV+++L+ +SS G
Sbjct: 334 EIVAQNNPSFQATAEEVDLDIDAQTESTLWRLKFFVKDALEVQGKSSASKG--------- 384
Query: 282 NNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRTKKLP 319
+ N+ NN KRKKEICDA+AK A K++KKLP
Sbjct: 385 ---DNTNTTTTATNNNKRKKEICDAIAKTAKKKSKKLP 419
>gi|3033386|gb|AAC12830.1| putative RING3 protein [Arabidopsis thaliana]
Length = 400
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 176/305 (57%), Positives = 226/305 (74%), Gaps = 26/305 (8%)
Query: 27 SASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 86
S L++ F R I QHKWAWPF+ PVDV+GLGLHDYY+VIEKPMD TIK KM+ +
Sbjct: 107 SPDLMRQFATMFRQ-IAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSE 165
Query: 87 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQ 146
Y NVREIYADVRLVFKNAM+YN+E++DV+VMA+SLLEKFEEKWL ++PK++EEEK+Q
Sbjct: 166 ---YSNVREIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQ 222
Query: 147 EEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKC------------ 194
+EEA+ + QLT EA Q A++L +EL E+D+QLE LRE+V+Q+C
Sbjct: 223 VDEEAEKHANKQLTMEAAQAEMARDLSNELYEIDLQLEKLRESVVQRCRVRNRVFGVVLE 282
Query: 195 --RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWR 252
RK+ST+EKK L AL RLSPEDL KAL++V+E+NPSF A A EV+LD+D Q+++TLWR
Sbjct: 283 INRKLSTQEKKGLSAALGRLSPEDLSKALKMVSESNPSFPAGAPEVELDIDVQTDVTLWR 342
Query: 253 LKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPAV 312
LKVFVQE+LKAA++SSG NNNN + + NKNN KR++EI DA+ K ++
Sbjct: 343 LKVFVQEALKAANKSSGGTNAQNNNNT--------GTGEINKNNAKRRREISDAINKASI 394
Query: 313 KRTKK 317
KR KK
Sbjct: 395 KRAKK 399
>gi|356526669|ref|XP_003531939.1| PREDICTED: transcription factor GTE1-like [Glycine max]
Length = 367
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 179/281 (63%), Positives = 222/281 (79%), Gaps = 6/281 (2%)
Query: 27 SASLLQFFVRQARSF---ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 83
SA +Q +RQ + ITQHKWAWPFM PVDVEGLGLHDYYE+I+KPMDF TIK+KM+
Sbjct: 83 SAKRMQELMRQFSTILRQITQHKWAWPFMDPVDVEGLGLHDYYEIIDKPMDFGTIKSKME 142
Query: 84 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
KDGTGY NVREIYADVRL+FKNAMKYN+E++DVHVMAK+LLEKFEEKWLQLLPKV EEE
Sbjct: 143 AKDGTGYNNVREIYADVRLIFKNAMKYNNEKNDVHVMAKTLLEKFEEKWLQLLPKVAEEE 202
Query: 144 KRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKK 203
KRQ EEEA+AQLD+QL E NKAK++ +EL E+DM L++L+E VIQ+CRK+ST+EKK
Sbjct: 203 KRQLEEEAQAQLDIQLALETTYANKAKDISTELCEIDMHLKSLKEMVIQQCRKLSTQEKK 262
Query: 204 NLGTALTRLSPEDLCKALEIVAENNPSFHATAQE-VDLDMDAQSELTLWRLKVFVQESLK 262
L +AL +LS E+L +AL+I+AE NP F ++ E V LD+DAQS+ TLWRLK FV++SL+
Sbjct: 263 MLMSALGKLSLENLYRALDIIAETNPMFQPSSTEDVVLDLDAQSDYTLWRLKAFVKDSLE 322
Query: 263 AASRSSGDMGGNNNNNNDDNNNEK--DNSNKKNKNNPKRKK 301
+ + G N N+N DD N+K D+ + K NPKRKK
Sbjct: 323 EQVKVNAGAGINPNDNPDDKKNKKRRDSGDSSGKTNPKRKK 363
>gi|255641563|gb|ACU21055.1| unknown [Glycine max]
Length = 363
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 178/281 (63%), Positives = 222/281 (79%), Gaps = 6/281 (2%)
Query: 27 SASLLQFFVRQARSF---ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 83
SA +Q +RQ + ITQHKWAWPFM PVDVEGLGLHDYYE+I+KPMDF TIK+KM+
Sbjct: 83 SAKRMQELMRQFSTILRQITQHKWAWPFMDPVDVEGLGLHDYYEIIDKPMDFGTIKSKME 142
Query: 84 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
KDGTGY NVREIYADVRL+FKNAMKYN+E++DVHVMAK+LLEKFEEKWLQLLPKV EEE
Sbjct: 143 AKDGTGYNNVREIYADVRLIFKNAMKYNNEKNDVHVMAKTLLEKFEEKWLQLLPKVAEEE 202
Query: 144 KRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKK 203
KRQ EEEA+AQLD+QL E NKAK++ +EL E+DM L++L+E VIQ+CRK+ST+EKK
Sbjct: 203 KRQLEEEAQAQLDIQLALETTYANKAKDISTELCEIDMHLKSLKEMVIQQCRKLSTQEKK 262
Query: 204 NLGTALTRLSPEDLCKALEIVAENNPSFHATAQE-VDLDMDAQSELTLWRLKVFVQESLK 262
L +AL +LS E+L +AL+I+AE NP F ++ E V LD+DAQS+ TLWRLK FV++SL+
Sbjct: 263 MLMSALGKLSLENLYRALDIIAETNPMFQPSSTEDVVLDLDAQSDYTLWRLKAFVKDSLE 322
Query: 263 AASRSSGDMGGNNNNNNDDNNNEK--DNSNKKNKNNPKRKK 301
+ + G N N+N DD N+K D+ + K NPK+KK
Sbjct: 323 EQVKVNAGAGINPNDNPDDKKNKKRRDSGDSSGKTNPKKKK 363
>gi|224109720|ref|XP_002315289.1| global transcription factor group [Populus trichocarpa]
gi|222864329|gb|EEF01460.1| global transcription factor group [Populus trichocarpa]
Length = 318
Score = 340 bits (872), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 173/238 (72%), Positives = 199/238 (83%), Gaps = 3/238 (1%)
Query: 27 SASLLQFFVRQARSF---ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 83
+A +Q +RQ + ITQHKWAWPFM PVDV+GL LHDYYEVI+KPMDFSTIKN+M+
Sbjct: 80 AAKRMQELMRQFGTILRQITQHKWAWPFMQPVDVKGLRLHDYYEVIDKPMDFSTIKNQME 139
Query: 84 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
KDGTGY+NVREI ADVRLVFKNAMKYNDER DVHVMAK+LL KFEEKWLQLLPKV EEE
Sbjct: 140 AKDGTGYKNVREISADVRLVFKNAMKYNDERSDVHVMAKTLLGKFEEKWLQLLPKVTEEE 199
Query: 144 KRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKK 203
KR+E+EE +A+LDMQL QEA A++L +EL EVDM LE LR+ V+QKCRKMSTEEK+
Sbjct: 200 KRREDEEVEAKLDMQLAQEAAHAKMARDLSNELYEVDMHLEELRDIVVQKCRKMSTEEKR 259
Query: 204 NLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESL 261
LG ALTRLSPEDL KALEIVA +NP F ATA+EVDLD+DAQ+E TLWRLK V++ L
Sbjct: 260 KLGVALTRLSPEDLTKALEIVARSNPGFQATAEEVDLDIDAQTESTLWRLKFLVKDVL 317
>gi|224057894|ref|XP_002299377.1| global transcription factor group [Populus trichocarpa]
gi|222846635|gb|EEE84182.1| global transcription factor group [Populus trichocarpa]
Length = 224
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 163/220 (74%), Positives = 193/220 (87%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
I QHKWAWPF+ PVDVEGL LHDYYEVIEKPMDF TIKN+M+ KDGTGY+NVREIYADVR
Sbjct: 5 IAQHKWAWPFLEPVDVEGLCLHDYYEVIEKPMDFRTIKNRMEAKDGTGYKNVREIYADVR 64
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
LVFKNAMKYNDERDDVHVMA++LLEKFEEKWLQLLPKV EEEKR+E+E+ Q+ +L +
Sbjct: 65 LVFKNAMKYNDERDDVHVMARTLLEKFEEKWLQLLPKVAEEEKRREKEQTATQVATKLAE 124
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKAL 221
E+ N A++L +EL+ VDMQLE +RE V++ RK+STEEKK LGTALT+LS +DL +AL
Sbjct: 125 ESSYANMAQDLSNELHGVDMQLERIREMVVRNSRKISTEEKKKLGTALTQLSHQDLIRAL 184
Query: 222 EIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESL 261
EIVAE+NPSF ATAQEV+LDMD QS++TLWRLKVFVQ++L
Sbjct: 185 EIVAEHNPSFQATAQEVNLDMDTQSDVTLWRLKVFVQDAL 224
>gi|357118940|ref|XP_003561205.1| PREDICTED: transcription factor GTE1-like [Brachypodium distachyon]
Length = 343
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 164/309 (53%), Positives = 209/309 (67%), Gaps = 30/309 (9%)
Query: 15 GKKLLEGG--CKNLSASLLQF--FVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIE 70
G+ GG CK +S + QF +R +T H WA PF+ PVDV GL L DYY++I
Sbjct: 60 GRYAANGGSHCKGMSELMRQFGGIIRT----VTNHDWAEPFLKPVDVVGLQLDDYYKIIT 115
Query: 71 KPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEE 130
KPMDFSTI+NKM+GKDGT Y NVREIY+DVRL+F NAMKYNDE DVH+MAK LLE+FEE
Sbjct: 116 KPMDFSTIRNKMEGKDGTKYNNVREIYSDVRLIFANAMKYNDEHHDVHIMAKLLLERFEE 175
Query: 131 KWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 190
KWL LLPKV E E+R+ +EE + EA AK+ ELNE++ QLE+LR+ V
Sbjct: 176 KWLHLLPKV-ENEERKIKEEPNDVPSTNTSPEAAIAKLAKDTDDELNEINKQLEDLRKMV 234
Query: 191 IQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTL 250
+Q+CRKM+T+EK+ LG L L+P+DL KALE+VA++NPSF + +EVDLDMDAQ+E TL
Sbjct: 235 VQRCRKMTTDEKRKLGAGLCHLTPDDLSKALEMVAQDNPSFQISGEEVDLDMDAQTETTL 294
Query: 251 WRLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKP 310
WRLK FV+E+L+ ++++ D K N KRK+EIC+ALAK
Sbjct: 295 WRLKFFVREALERQAKAAPD---------------------KTDENAKRKREICNALAKT 333
Query: 311 AVKRTKKLP 319
KR KK P
Sbjct: 334 NSKRIKKQP 342
>gi|357517357|ref|XP_003628967.1| Global transcription factor group [Medicago truncatula]
gi|355522989|gb|AET03443.1| Global transcription factor group [Medicago truncatula]
Length = 365
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 163/267 (61%), Positives = 205/267 (76%), Gaps = 13/267 (4%)
Query: 31 LQFFVRQARSF---ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 87
+Q +RQ + ITQHKWAWPF+ PVDVEGLGLHDYYE+I+KPMDF TIKNKM+ KDG
Sbjct: 90 MQELMRQFSTILRQITQHKWAWPFLEPVDVEGLGLHDYYEIIDKPMDFGTIKNKMEAKDG 149
Query: 88 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQE 147
TGY+NVREIYADVRL+FKNAMKYN+E+ DVHVMAK+L+EKFE+KWL LLPKV EEEKRQ
Sbjct: 150 TGYKNVREIYADVRLIFKNAMKYNNEKHDVHVMAKTLMEKFEDKWLLLLPKVAEEEKRQI 209
Query: 148 EEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGT 207
EEEA+ Q+D+ L QE + AK+L +ELNEV ++L RE VIQ CRK+ST EKK LG
Sbjct: 210 EEEAQVQMDIHLAQETTYADMAKDLSNELNEVGIRLMEFREKVIQNCRKLSTGEKKALGK 269
Query: 208 ALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRS 267
A+ +LSPE+L +AL++VAE NPSF +TA EV LD++AQS+ T+WRL FV+ +L+
Sbjct: 270 AIAKLSPENLQRALDLVAEINPSFESTADEVVLDINAQSDYTVWRLYHFVKGALE----- 324
Query: 268 SGDMGGNNNNNNDDNNNEKDNSNKKNK 294
G G NN+ + EK S++K +
Sbjct: 325 -GQQGTAVNNDTE----EKRYSSRKRR 346
>gi|125553971|gb|EAY99576.1| hypothetical protein OsI_21551 [Oryza sativa Indica Group]
gi|125595985|gb|EAZ35765.1| hypothetical protein OsJ_20055 [Oryza sativa Japonica Group]
Length = 344
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 168/320 (52%), Positives = 212/320 (66%), Gaps = 39/320 (12%)
Query: 13 FIGKKLLEGG----------CKNLSASLLQF--FVRQARSFITQHKWAWPFMHPVDVEGL 60
+ GKK GG K + + QF VRQ IT H+WA PF+ PVDV GL
Sbjct: 50 YDGKKHGSGGRKAGRKDSSLSKGMPDLMRQFGTIVRQ----ITSHEWAEPFLKPVDVVGL 105
Query: 61 GLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVM 120
L DYY++I KPMDFSTI+ KM+GKD Y NVREIY+DVRL+F NAMKYNDER DVH+M
Sbjct: 106 QLDDYYKIITKPMDFSTIQKKMEGKDDNKYNNVREIYSDVRLIFANAMKYNDERHDVHIM 165
Query: 121 AKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVD 180
AKSLLEKFEEKWLQLLPKV EE++Q++EE+ + ++ E AK+ +EL E++
Sbjct: 166 AKSLLEKFEEKWLQLLPKVENEERKQKDEESNGVPKVNISPEEAIAKLAKDTDNELIEIN 225
Query: 181 MQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDL 240
QLE LR+ V+QKCRKM+T EK+ LG L LSPE+L KALE+VA++NPSF A E++L
Sbjct: 226 KQLEELRQMVVQKCRKMTTYEKRKLGAGLCHLSPEELTKALEMVAQDNPSFEAKGDELEL 285
Query: 241 DMDAQSELTLWRLKVFVQESL-KAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKR 299
DMDAQSE TLWRLK FV+E+L + A+ +SG + N KR
Sbjct: 286 DMDAQSETTLWRLKFFVREALERQANVASG----------------------RTDENAKR 323
Query: 300 KKEICDALAKPAVKRTKKLP 319
K+EIC+ALA+ A KR K+ P
Sbjct: 324 KREICNALARTASKRVKQQP 343
>gi|55296460|dbj|BAD68656.1| DNA-binding bromodomain-containing protein-like [Oryza sativa
Japonica Group]
gi|55297001|dbj|BAD68476.1| DNA-binding bromodomain-containing protein-like [Oryza sativa
Japonica Group]
Length = 360
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 168/320 (52%), Positives = 212/320 (66%), Gaps = 39/320 (12%)
Query: 13 FIGKKLLEGG----------CKNLSASLLQF--FVRQARSFITQHKWAWPFMHPVDVEGL 60
+ GKK GG K + + QF VRQ IT H+WA PF+ PVDV GL
Sbjct: 66 YDGKKHGSGGRKAGRKDSSLSKGMPDLMRQFGTIVRQ----ITSHEWAEPFLKPVDVVGL 121
Query: 61 GLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVM 120
L DYY++I KPMDFSTI+ KM+GKD Y NVREIY+DVRL+F NAMKYNDER DVH+M
Sbjct: 122 QLDDYYKIITKPMDFSTIQKKMEGKDDNKYNNVREIYSDVRLIFANAMKYNDERHDVHIM 181
Query: 121 AKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVD 180
AKSLLEKFEEKWLQLLPKV EE++Q++EE+ + ++ E AK+ +EL E++
Sbjct: 182 AKSLLEKFEEKWLQLLPKVENEERKQKDEESNGVPKVNISPEEAIAKLAKDTDNELIEIN 241
Query: 181 MQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDL 240
QLE LR+ V+QKCRKM+T EK+ LG L LSPE+L KALE+VA++NPSF A E++L
Sbjct: 242 KQLEELRQMVVQKCRKMTTYEKRKLGAGLCHLSPEELTKALEMVAQDNPSFEAKGDELEL 301
Query: 241 DMDAQSELTLWRLKVFVQESL-KAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKR 299
DMDAQSE TLWRLK FV+E+L + A+ +SG + N KR
Sbjct: 302 DMDAQSETTLWRLKFFVREALERQANVASG----------------------RTDENAKR 339
Query: 300 KKEICDALAKPAVKRTKKLP 319
K+EIC+ALA+ A KR K+ P
Sbjct: 340 KREICNALARTASKRVKQQP 359
>gi|242091894|ref|XP_002436437.1| hypothetical protein SORBIDRAFT_10g002570 [Sorghum bicolor]
gi|241914660|gb|EER87804.1| hypothetical protein SORBIDRAFT_10g002570 [Sorghum bicolor]
Length = 346
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 155/279 (55%), Positives = 196/279 (70%), Gaps = 23/279 (8%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
IT HK AWPF+ PVDV L + DY+++I +PMDFSTI+ KM+ KDGT Y NVREI +DVR
Sbjct: 90 ITSHKDAWPFLKPVDVVTLHIPDYHKIITQPMDFSTIQKKMERKDGTCYTNVREICSDVR 149
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L+F NAMKYND+++ VH+MAKSLLEKFEEKWL LPKV EEKRQ+EEE+K ++
Sbjct: 150 LIFANAMKYNDDQNVVHLMAKSLLEKFEEKWLHFLPKVESEEKRQKEEESKGVAATNTSR 209
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKAL 221
E AK+ ELN+++ +LE LR+ V+ +CRKM+T+EK+ LG + LSP+DL KAL
Sbjct: 210 EVAIAKLAKDTDDELNQINRKLEELRKMVVHRCRKMTTDEKRKLGAGICHLSPDDLNKAL 269
Query: 222 EIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESL-KAASRSSGDMGGNNNNNND 280
EIVA++NPSF A+EVDLDMDAQSE TLWRLK FV+E+L + A+ +SG M
Sbjct: 270 EIVAQDNPSFQTKAEEVDLDMDAQSETTLWRLKFFVREALERQANVASGKMD-------- 321
Query: 281 DNNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRTKKLP 319
N KRK+EIC+ALAK A KR KK P
Sbjct: 322 --------------ENAKRKREICNALAKTASKRIKKQP 346
>gi|326490245|dbj|BAJ84786.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 352
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 156/314 (49%), Positives = 205/314 (65%), Gaps = 26/314 (8%)
Query: 6 RSSSKMHFIGKKLLEGGCKNLSASLLQF--FVRQARSFITQHKWAWPFMHPVDVEGLGLH 63
R+ + + CK + + Q +RQ IT H+W+ PF+ PVDV GL L
Sbjct: 63 RAIGSSRYAANGARDSNCKGMPDLMRQLAGIIRQ----ITSHEWSAPFLQPVDVVGLQLD 118
Query: 64 DYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKS 123
DYY++I KPMDFSTI+NKM+GKDGT Y++VREIY+DVRL+F NAM YNDE DVH+MAK
Sbjct: 119 DYYKIITKPMDFSTIQNKMEGKDGTKYKSVREIYSDVRLIFTNAMTYNDELHDVHIMAKL 178
Query: 124 LLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQL 183
LLEKFEEKWLQLLPKV EE++Q+ E A ++A+ AK+ ELNE++ QL
Sbjct: 179 LLEKFEEKWLQLLPKVENEERKQQMETNDAPTTDTSPEDAI-AQLAKDTDDELNEINKQL 237
Query: 184 ENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMD 243
E LR V+Q+C+KM+T+EK+ LG L L+PED KALE+VA++NP F TA+E+DLDMD
Sbjct: 238 EELRNMVVQRCKKMTTDEKRKLGAGLCHLTPEDFSKALELVAQDNPDFQTTAEELDLDMD 297
Query: 244 AQSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEI 303
AQSE TLWRLK FV+E+L+ + + G K N KRK++I
Sbjct: 298 AQSETTLWRLKFFVREALERQANPAAAPG-------------------KTDENAKRKRDI 338
Query: 304 CDALAKPAVKRTKK 317
+ALAK A KR ++
Sbjct: 339 YNALAKTASKRIRR 352
>gi|194696466|gb|ACF82317.1| unknown [Zea mays]
gi|413942791|gb|AFW75440.1| transcription factor GTE6 [Zea mays]
Length = 346
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/279 (54%), Positives = 194/279 (69%), Gaps = 23/279 (8%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
IT HK AWPF+ PVDV L L DY+ +I +PMDFSTI+ KM+ KDGT Y NVREI +DVR
Sbjct: 90 ITSHKDAWPFLEPVDVVTLQLPDYHNIITQPMDFSTIQKKMERKDGTCYTNVREICSDVR 149
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L+F NAMKYND+++ +H+MAKSLLEKFEEKWL LPKV EEKRQ+EEE+K ++
Sbjct: 150 LIFANAMKYNDDQNVIHLMAKSLLEKFEEKWLHFLPKVESEEKRQKEEESKGVAATNTSR 209
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKAL 221
E AK+ ELN+++ +LE LR+ V+ +CRKM+T+EK+ LG + LSP+DL KAL
Sbjct: 210 EVAIVKLAKDTDDELNQINKKLEELRKMVVHRCRKMTTDEKRKLGAGICHLSPDDLSKAL 269
Query: 222 EIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESL-KAASRSSGDMGGNNNNNND 280
EIVA++NPSF A+EVDLDMDAQSE TLWRLK FV+E+L + A+ +SG M
Sbjct: 270 EIVAQDNPSFQTKAEEVDLDMDAQSETTLWRLKFFVREALERQANVASGKMD-------- 321
Query: 281 DNNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRTKKLP 319
N KRK+EIC+ALAK +R KK P
Sbjct: 322 --------------ENAKRKREICNALAKTTSRRIKKQP 346
>gi|195655085|gb|ACG47010.1| transcription factor GTE6 [Zea mays]
Length = 346
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/279 (54%), Positives = 194/279 (69%), Gaps = 23/279 (8%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
IT HK AWPF+ PVDV L L DY+ +I +PMDFSTI+ KM+ KDGT Y NVREI +DVR
Sbjct: 90 ITSHKDAWPFLEPVDVVTLQLPDYHNIITQPMDFSTIQKKMERKDGTCYTNVREICSDVR 149
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L+F NAMKYND+++ +H+MAKSLLEKFEEKWL LPKV EEKRQ+EEE+K ++
Sbjct: 150 LIFANAMKYNDDQNVIHLMAKSLLEKFEEKWLHFLPKVESEEKRQKEEESKGVAATNTSR 209
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKAL 221
E AK+ ELN+++ +LE LR+ V+ +CRKM+T+EK+ LG + LSP+DL KAL
Sbjct: 210 EVAIVKLAKDTDDELNQINRKLEELRKMVVHRCRKMTTDEKRKLGAVICHLSPDDLSKAL 269
Query: 222 EIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESL-KAASRSSGDMGGNNNNNND 280
EIVA++NPSF A+EVDLDMDAQSE TLWRLK FV+E+L + A+ +SG M
Sbjct: 270 EIVAQDNPSFQTKAEEVDLDMDAQSETTLWRLKFFVREALERQANVASGKMD-------- 321
Query: 281 DNNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRTKKLP 319
N KRK+EIC+ALAK +R KK P
Sbjct: 322 --------------ENAKRKREICNALAKTTSRRIKKQP 346
>gi|356532581|ref|XP_003534850.1| PREDICTED: transcription factor GTE1-like [Glycine max]
Length = 578
Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 155/294 (52%), Positives = 208/294 (70%), Gaps = 13/294 (4%)
Query: 8 SSKMHFIG-KKLLEGGCK---NLSASLLQFFVRQARSF--ITQHKWAWPFMHPVDVEGLG 61
S + H IG K+ +GG N S ++ + + + F ITQH+WAWPFM PVDVEGLG
Sbjct: 290 SQEKHVIGTKRSRQGGSSKEANSSNTMKEVMHQFSTIFHQITQHRWAWPFMDPVDVEGLG 349
Query: 62 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 121
L DYY++IEKPMDF TIK KMD KDG+GY+NVR+IY+DV LVFKNAMKYNDE+ D+H+MA
Sbjct: 350 LSDYYQIIEKPMDFGTIKRKMDAKDGSGYKNVRQIYSDVTLVFKNAMKYNDEKTDIHIMA 409
Query: 122 KSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDM 181
K+L EKFE+KWLQLLPKV + E E+EEA+A L +L +EA N K++R L +VD
Sbjct: 410 KTLREKFEKKWLQLLPKVAQAE--SEKEEARALLKAKLAEEAAYANMTKDIRHALCDVDE 467
Query: 182 QLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLD 241
QL+NL+E VI+KCRK+ST EK L L RL+ ++L KA+ I+ E +P+F A +VDLD
Sbjct: 468 QLKNLKEMVIKKCRKLSTHEKLALKKNLNRLNGDNLLKAMAIIHEIDPTFQHDAPQVDLD 527
Query: 242 MDAQSELTLWRLKVFVQESLKAASRSSG-DMGGNNNNNNDDNNNEKDNSNKKNK 294
+D QS+ LW+L +FV+E+L+ ++ DM N+N N D + N+NK+ K
Sbjct: 528 LDCQSDFILWKLNMFVKEALEDQDKAVAEDMAVNHNVNTQD----QKNTNKRRK 577
>gi|255583928|ref|XP_002532712.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223527558|gb|EEF29679.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 401
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/292 (55%), Positives = 204/292 (69%), Gaps = 27/292 (9%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEV----------IEKPMDFSTIKNKMDGKDGTGYR 91
ITQHKWAWPFM PVDV L L+DYYEV +E+P F+ + +
Sbjct: 116 ITQHKWAWPFMEPVDVVRLCLNDYYEVKLNAISKSYQLEQPT-FTV----------SYHS 164
Query: 92 NVREIYADVRLV--FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 149
++ I L+ FKNAMKYNDERDDVHVMA++LLEKFEEKWLQLLPKV EEEKR+E+
Sbjct: 165 SLIVICHFFPLIAGFKNAMKYNDERDDVHVMARTLLEKFEEKWLQLLPKVAEEEKRREKV 224
Query: 150 EAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTAL 209
+ AQ ++L QE N A+ L +EL++VDMQLE LR V+QKCR+ S EEKK LG AL
Sbjct: 225 KVAAQSAIELAQEVSHANMARNLNNELSDVDMQLEKLRNIVVQKCRRTSVEEKKKLGAAL 284
Query: 210 TRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSG 269
TRLSPE+L +ALEIVA++NPSF ATAQ VDLDMD QSE TLWRL+VFV+++LK ++
Sbjct: 285 TRLSPENLTRALEIVADDNPSFQATAQVVDLDMDTQSESTLWRLRVFVKDALKDMGTNAM 344
Query: 270 DMGGNNNNNNDDN---NNEKDN-SNKKNKNNPKRKKEICDALAKPAVKRTKK 317
MGG+NN+ N DN NN+K + NN KR++EICDA+ K + K+ +K
Sbjct: 345 GMGGSNNDENKDNIKINNKKSKNTAATATNNNKRRREICDAITKTSAKKARK 396
>gi|326495086|dbj|BAJ85639.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/287 (52%), Positives = 194/287 (67%), Gaps = 25/287 (8%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
L +RQ IT H+W+ PF+ PVDV GL L DY+++I KPMDFSTI+NKM+GKDGT Y
Sbjct: 8 LAGIIRQ----ITSHEWSAPFLQPVDVVGLQLDDYHKIITKPMDFSTIQNKMEGKDGTKY 63
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 150
++VREIY+DVRL+F NAM YNDE DVH+MAK LL+KFEEKWLQLLPKV EE++ E
Sbjct: 64 KSVREIYSDVRLIFNNAMTYNDEHHDVHIMAKLLLDKFEEKWLQLLPKVENEERKHVEPN 123
Query: 151 AKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALT 210
D + E AK+ ELNE++ QLE LR V+Q+C+KM+T+EK+ LG L
Sbjct: 124 DAPTTDT--SPEDAIAKLAKDTDDELNEINRQLEELRNMVVQRCKKMTTDEKRKLGAGLC 181
Query: 211 RLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGD 270
L+PEDL KALE+VA++NP F TA+EV LDMDAQSE TLWRLK FV+E+L+ + ++
Sbjct: 182 HLTPEDLSKALELVAQDNPDFQTTAEEVHLDMDAQSETTLWRLKFFVREALERQANTAAA 241
Query: 271 MGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRTKK 317
G K N KRK++I +ALAK A KR ++
Sbjct: 242 PG-------------------KTDENAKRKRDIYNALAKTASKRIRR 269
>gi|356558209|ref|XP_003547400.1| PREDICTED: transcription factor GTE1-like [Glycine max]
Length = 349
Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 150/290 (51%), Positives = 207/290 (71%), Gaps = 13/290 (4%)
Query: 12 HFIG-KKLLEGGCK---NLSASLLQFFVRQARSF--ITQHKWAWPFMHPVDVEGLGLHDY 65
H IG K+ +GG N S ++ + + + F IT +WAWPFM PVDVEGLGLHDY
Sbjct: 65 HVIGTKRSQQGGSSREANSSNTMKEVMHQFSIIFHQITHQRWAWPFMEPVDVEGLGLHDY 124
Query: 66 YEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLL 125
Y++IEKPMDF TIK KM+ KDG+GY+NVREIY+DVRLVF+NAMKYN E++DVH+MAK+LL
Sbjct: 125 YQIIEKPMDFGTIKRKMNAKDGSGYKNVREIYSDVRLVFENAMKYNGEKNDVHIMAKTLL 184
Query: 126 EKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLEN 185
EKFE+KWLQLLPKV + E+ E+EEA+ L+ + QEA K++R L +VD QL+N
Sbjct: 185 EKFEKKWLQLLPKVAQAER--EKEEARVLLEAKRAQEATYAKMTKDIRHALCDVDEQLKN 242
Query: 186 LRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQ 245
L+E VI+KCRK+ST EK L L+RL+ +L KA+ I+ E +P+F A +VDLD+D Q
Sbjct: 243 LKEMVIKKCRKLSTHEKLALKKNLSRLNGGNLLKAMSIIHEIDPTFQHDAPQVDLDLDRQ 302
Query: 246 SELTLWRLKVFVQESLKAASRSSG-DMGGNNNNNNDDNNNEKDNSNKKNK 294
S+ LW+L +F +E+L+ +++ +M N+N N +D + N+NK+ K
Sbjct: 303 SDFILWKLNLFTKEALEDQDKAAAEEMAVNHNVNTED----QKNTNKRRK 348
>gi|147833163|emb|CAN77592.1| hypothetical protein VITISV_020474 [Vitis vinifera]
Length = 346
Score = 290 bits (741), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 177/296 (59%), Positives = 213/296 (71%), Gaps = 25/296 (8%)
Query: 27 SASLLQFFVRQARSF---ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 83
+A +Q +RQ + ITQHKWAWPFM PVDVEGLGLHDYYE P +M
Sbjct: 71 AAKRMQELMRQFGTILRQITQHKWAWPFMQPVDVEGLGLHDYYEQRMVP------DIRMS 124
Query: 84 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
G+ I ADVRLVFKNAMKYNDER DVHVMAK+LL KFEEKWLQLLPKV EE+
Sbjct: 125 GR----------ICADVRLVFKNAMKYNDERRDVHVMAKTLLGKFEEKWLQLLPKVAEED 174
Query: 144 KRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKK 203
KR+EEEEA+AQLDM L QEA A+++ +EL E+DM L+++RE ++QKCRK STEEK+
Sbjct: 175 KRREEEEAEAQLDMHLAQEAAHAKMARDISNELYEIDMHLDDIREMIVQKCRKTSTEEKR 234
Query: 204 NLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKA 263
LG AL+RLS EDL KALEIVA++NPSF ATA+EV LD+DAQ E TLWRLK FV+++L+
Sbjct: 235 KLGAALSRLSAEDLSKALEIVAQSNPSFQATAEEVHLDIDAQRESTLWRLKFFVKDALEI 294
Query: 264 ASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRTKKLP 319
+SS MGGNN +N++ NN KRKKEICDA+AK A K+ KKLP
Sbjct: 295 QGKSSASMGGNNTATT------TNNNHPTTNNNXKRKKEICDAIAKTAKKKNKKLP 344
>gi|388497474|gb|AFK36803.1| unknown [Lotus japonicus]
Length = 236
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 150/247 (60%), Positives = 196/247 (79%), Gaps = 13/247 (5%)
Query: 73 MDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
MDFSTIK+KM+ +DGTGY+NVREIYADVRL+FKNAMKYN+E+ DVHVMAK+LLEKFEEKW
Sbjct: 1 MDFSTIKSKMEAEDGTGYKNVREIYADVRLIFKNAMKYNNEKHDVHVMAKTLLEKFEEKW 60
Query: 133 LQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQ 192
LQLLPKV EEEKR EEEA AQLD+QL QE N A++L EL +VDM+L++L+E VIQ
Sbjct: 61 LQLLPKVAEEEKRLLEEEALAQLDIQLAQEKTYANLARDLSVELYQVDMKLKDLKEMVIQ 120
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWR 252
KCRK+S +EK+ LG+ALT+LS ++L +ALEIVAENNP F ++ +EVDLD+DAQS+ TLWR
Sbjct: 121 KCRKLSPQEKRILGSALTKLSHQNLNRALEIVAENNPIFQSSGEEVDLDIDAQSDYTLWR 180
Query: 253 LKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPAV 312
LKVFV+++L+A + +G + N+N +N K+N KR++E+ D+LA +
Sbjct: 181 LKVFVKDALEAQGKVAGGVAVNDNLDN-------------KKSNSKRRRELIDSLANTNI 227
Query: 313 KRTKKLP 319
K+T+KL
Sbjct: 228 KKTRKLS 234
>gi|294462729|gb|ADE76909.1| unknown [Picea sitchensis]
Length = 377
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 149/303 (49%), Positives = 196/303 (64%), Gaps = 30/303 (9%)
Query: 20 EGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 79
E GC A L++ F R ITQH+WAWPFM PVDV+GLGLHDY++VI+KPMDF TI+
Sbjct: 99 EAGCSKRMAELMRQFSTILRQ-ITQHRWAWPFMTPVDVKGLGLHDYHDVIKKPMDFGTIR 157
Query: 80 NKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV 139
KMD KD TGY+NV +I DVRLVFKNA+ YND++ DVHVMAK+L +KFEEKW L PKV
Sbjct: 158 RKMDAKDATGYKNVCDICEDVRLVFKNAVTYNDDQSDVHVMAKTLSQKFEEKWKTLWPKV 217
Query: 140 ----MEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCR 195
+K + + ++ +D +L+ E ++L EL+E++ LE LR+ + KCR
Sbjct: 218 NEEEARRKKEEADANSREMVDSRLSGE----TDLEKLGGELDELNEHLEKLRQELAPKCR 273
Query: 196 KMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKV 255
MS EEK+ LG +L +LSPEDL KAL+I+A+ NPSF T EV+LD+DAQ TLWRL+
Sbjct: 274 MMSVEEKRQLGESLGKLSPEDLTKALQIIAQKNPSFIPTEDEVELDIDAQDASTLWRLQY 333
Query: 256 FVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRT 315
FV+ L +++ S K + KRKKEICDA+AK A KR
Sbjct: 334 FVKAVLSVQAKT---------------------SIAKAQAKTKRKKEICDAIAKNARKRI 372
Query: 316 KKL 318
+K+
Sbjct: 373 RKM 375
>gi|388498404|gb|AFK37268.1| unknown [Lotus japonicus]
Length = 236
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 148/247 (59%), Positives = 194/247 (78%), Gaps = 13/247 (5%)
Query: 73 MDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
MDFSTIK+KM+ +DGTGY+NVREIYADVRL+FKNAMKYN+E+ DVHVMAK+LLEKFEEKW
Sbjct: 1 MDFSTIKSKMEAEDGTGYKNVREIYADVRLIFKNAMKYNNEKHDVHVMAKTLLEKFEEKW 60
Query: 133 LQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQ 192
LQLLPKV EEEKR EEEA A+LD+QL QE N A++L EL +VDM+L++L+E VIQ
Sbjct: 61 LQLLPKVAEEEKRLLEEEALARLDIQLAQEKTYANLARDLSVELYQVDMKLKDLKEMVIQ 120
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWR 252
KCRK+S +EK+ LG+ALT+LS ++L +ALEIVAENNP F ++ +EVDLD+DAQS+ TLWR
Sbjct: 121 KCRKLSPQEKRILGSALTKLSHQNLNRALEIVAENNPIFQSSGEEVDLDIDAQSDYTLWR 180
Query: 253 LKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPAV 312
LKVFV+++L+A + +G + N ++ KNN KR++E+ D+LA +
Sbjct: 181 LKVFVKDALEAQGKVAGGVAVN-------------DNLDNKKNNSKRRRELIDSLANTNI 227
Query: 313 KRTKKLP 319
K+T+KL
Sbjct: 228 KKTRKLS 234
>gi|357490537|ref|XP_003615556.1| Bromodomain-containing protein [Medicago truncatula]
gi|355516891|gb|AES98514.1| Bromodomain-containing protein [Medicago truncatula]
Length = 322
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/280 (49%), Positives = 189/280 (67%), Gaps = 24/280 (8%)
Query: 15 GKKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMD 74
KK L+ +++ A + F + S I + KWAWPF+ PVDVEGLGL+DYY++IEKPMD
Sbjct: 65 SKKALKRASEDMQAEMSDAF---SFSQIAKDKWAWPFLDPVDVEGLGLYDYYQIIEKPMD 121
Query: 75 FSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
FSTIK +M+ KDG+GY+NVREIYADVRL+FKNAMKYNDE++DVHVMAK+LLEKFE
Sbjct: 122 FSTIKIRMEAKDGSGYKNVREIYADVRLIFKNAMKYNDEKNDVHVMAKTLLEKFENDL-- 179
Query: 135 LLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKC 194
+EEA +L+ +L QEA N +EL +EL++VDM L +L+ T I +C
Sbjct: 180 ------------SKEEAHEELNKRLAQEATYANMTRELSTELSKVDMALRSLKTTAISQC 227
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
RK+S EK L A T+LSP+++ KALEIV E+NP+F V LD+D+QS+ TL+RL
Sbjct: 228 RKLSHPEKLILANAFTKLSPDNIVKALEIVKESNPNFKDRIDMVTLDLDSQSDYTLFRLH 287
Query: 255 VFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNK 294
+FV+ +L+ G + N++DN E N+ KK +
Sbjct: 288 MFVKNTLEVQE-------GTSVINHEDNIEEMKNNAKKRR 320
>gi|297819940|ref|XP_002877853.1| hypothetical protein ARALYDRAFT_485593 [Arabidopsis lyrata subsp.
lyrata]
gi|297323691|gb|EFH54112.1| hypothetical protein ARALYDRAFT_485593 [Arabidopsis lyrata subsp.
lyrata]
Length = 371
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/264 (52%), Positives = 186/264 (70%), Gaps = 4/264 (1%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
ITQHK AWPFMHPV+VEGLGLHDY+EVI+KPMDFSTIKN+M+ KDGTGY++V ++YAD+R
Sbjct: 107 ITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKDGTGYKHVLQVYADMR 166
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
LVF+NAM YN+E DV+ MAK LLEKFEEKW LPKV EEEK +EEEE +A + L +
Sbjct: 167 LVFENAMNYNEETSDVYSMAKKLLEKFEEKWAHFLPKVQEEEKIREEEEKQAATEALLAK 226
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKAL 221
EA ++L +E+ + +LE L V+++CRK++ EEK+N+G AL +LSP+DL K L
Sbjct: 227 EASHIKTTRDLGNEICHANDELEKLMRKVVERCRKITIEEKRNIGLALLKLSPDDLQKVL 286
Query: 222 EIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAA----SRSSGDMGGNNNN 277
IVA+ +PSF A+EV ++MD E TLWRLK FV+++L A G N
Sbjct: 287 GIVAQADPSFQPRAEEVSIEMDILDEPTLWRLKFFVKDALDNAMKKKKEEETKTGALNGT 346
Query: 278 NNDDNNNEKDNSNKKNKNNPKRKK 301
+ +N+++ +NK + KR +
Sbjct: 347 QKKEVSNKRNATNKLAERKTKRSR 370
>gi|334185931|ref|NP_001190072.1| transcription factor GTE6 [Arabidopsis thaliana]
gi|332645405|gb|AEE78926.1| transcription factor GTE6 [Arabidopsis thaliana]
Length = 386
Score = 263 bits (672), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 134/223 (60%), Positives = 171/223 (76%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
ITQHK AWPFMHPV+VEGLGLHDY+EVI+KPMDFSTIKN+M+ KDGTGY++V +IYAD+R
Sbjct: 122 ITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKDGTGYKHVMQIYADMR 181
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
LVF+NAM YN+E DV+ MAK LLEKFEEKW LPKV EEEK +EEEE +A + L +
Sbjct: 182 LVFENAMNYNEETSDVYSMAKKLLEKFEEKWAHFLPKVQEEEKIREEEEKQAAKEALLAK 241
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKAL 221
EA +EL +E+ + +LE L V+++CRK++ EEK+N+G AL +LSP+DL K L
Sbjct: 242 EASHIKTTRELGNEICHANDELEKLMRKVVERCRKITIEEKRNIGLALLKLSPDDLQKVL 301
Query: 222 EIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAA 264
IVA+ NPSF A+EV ++MD E TLWRLK FV+++L A
Sbjct: 302 GIVAQANPSFQPRAEEVSIEMDILDEPTLWRLKFFVKDALDNA 344
>gi|15231174|ref|NP_190796.1| transcription factor GTE6 [Arabidopsis thaliana]
gi|75172388|sp|Q9FT54.1|GTE6_ARATH RecName: Full=Transcription factor GTE6; AltName:
Full=Bromodomain-containing protein GTE6; AltName:
Full=Protein GENERAL TRANSCRIPTION FACTOR GROUP E6;
AltName: Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP
E6
gi|10045561|emb|CAC07919.1| putative protein [Arabidopsis thaliana]
gi|332645404|gb|AEE78925.1| transcription factor GTE6 [Arabidopsis thaliana]
Length = 369
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/223 (60%), Positives = 171/223 (76%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
ITQHK AWPFMHPV+VEGLGLHDY+EVI+KPMDFSTIKN+M+ KDGTGY++V +IYAD+R
Sbjct: 105 ITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKDGTGYKHVMQIYADMR 164
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
LVF+NAM YN+E DV+ MAK LLEKFEEKW LPKV EEEK +EEEE +A + L +
Sbjct: 165 LVFENAMNYNEETSDVYSMAKKLLEKFEEKWAHFLPKVQEEEKIREEEEKQAAKEALLAK 224
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKAL 221
EA +EL +E+ + +LE L V+++CRK++ EEK+N+G AL +LSP+DL K L
Sbjct: 225 EASHIKTTRELGNEICHANDELEKLMRKVVERCRKITIEEKRNIGLALLKLSPDDLQKVL 284
Query: 222 EIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAA 264
IVA+ NPSF A+EV ++MD E TLWRLK FV+++L A
Sbjct: 285 GIVAQANPSFQPRAEEVSIEMDILDEPTLWRLKFFVKDALDNA 327
>gi|212276108|ref|NP_001130765.1| hypothetical protein [Zea mays]
gi|194690058|gb|ACF79113.1| unknown [Zea mays]
gi|413942792|gb|AFW75441.1| hypothetical protein ZEAMMB73_593209 [Zea mays]
Length = 226
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/248 (54%), Positives = 172/248 (69%), Gaps = 23/248 (9%)
Query: 73 MDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
MDFSTI+ KM+ KDGT Y NVREI +DVRL+F NAMKYND+++ +H+MAKSLLEKFEEKW
Sbjct: 1 MDFSTIQKKMERKDGTCYTNVREICSDVRLIFANAMKYNDDQNVIHLMAKSLLEKFEEKW 60
Query: 133 LQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQ 192
L LPKV EEKRQ+EEE+K ++E AK+ ELN+++ +LE LR+ V+
Sbjct: 61 LHFLPKVESEEKRQKEEESKGVAATNTSREVAIVKLAKDTDDELNQINKKLEELRKMVVH 120
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWR 252
+CRKM+T+EK+ LG + LSP+DL KALEIVA++NPSF A+EVDLDMDAQSE TLWR
Sbjct: 121 RCRKMTTDEKRKLGAGICHLSPDDLSKALEIVAQDNPSFQTKAEEVDLDMDAQSETTLWR 180
Query: 253 LKVFVQESL-KAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPA 311
LK FV+E+L + A+ +SG M N KRK+EIC+ALAK
Sbjct: 181 LKFFVREALERQANVASGKMD----------------------ENAKRKREICNALAKTT 218
Query: 312 VKRTKKLP 319
+R KK P
Sbjct: 219 SRRIKKQP 226
>gi|357497929|ref|XP_003619253.1| Global transcription factor group [Medicago truncatula]
gi|355494268|gb|AES75471.1| Global transcription factor group [Medicago truncatula]
Length = 478
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 135/209 (64%), Positives = 166/209 (79%), Gaps = 2/209 (0%)
Query: 68 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 127
+I+KPMDF+TIKN+++ DGTGY++V E ADVRLVFKNAMKYNDER DVHVMAK+L EK
Sbjct: 79 IIDKPMDFNTIKNQIEANDGTGYKHVWEACADVRLVFKNAMKYNDERSDVHVMAKTLREK 138
Query: 128 FEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSE--LNEVDMQLEN 185
FEEKWLQ LP+V EEE R+EEEEA+A+L MQ QEA AK L +E L+EVD+ LE
Sbjct: 139 FEEKWLQFLPRVAEEETRREEEEAEARLAMQFAQEAAHAKMAKHLSNELMLDEVDLHLEE 198
Query: 186 LRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQ 245
LRE V++KCRKMSTEEK+NLG ALT+LSP+DL +AL IV + NPSF A A E DLD+DAQ
Sbjct: 199 LREMVVKKCRKMSTEEKRNLGIALTKLSPDDLRRALNIVTQTNPSFQANAVEADLDIDAQ 258
Query: 246 SELTLWRLKVFVQESLKAASRSSGDMGGN 274
S+ TLWRL FV ++L+ S++S M G+
Sbjct: 259 SQSTLWRLNFFVMDALEVQSQNSESMDGD 287
>gi|168002796|ref|XP_001754099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694653|gb|EDQ81000.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/265 (46%), Positives = 172/265 (64%), Gaps = 13/265 (4%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
I+QHKWAWPF+ PVDVEGLGLHDY +VIEKPMD TIKNKMD KD +GY++V+E+ D+R
Sbjct: 235 ISQHKWAWPFLKPVDVEGLGLHDYNDVIEKPMDLGTIKNKMDAKDTSGYQHVQEVCDDMR 294
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL-PKVMEEEKRQEEEEAKAQL---DM 157
LVF NAM YN E DVHVM+K+L +KFEEKW L+ PK+ EE + ++E+ + QL M
Sbjct: 295 LVFSNAMTYNPEGSDVHVMSKTLSDKFEEKWKALIEPKLHFEESKTQQEDNEVQLKEAGM 354
Query: 158 QLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKC-RKMSTEEKKNLGTALTRLSPED 216
Q+ +E ++ +L E+D QLE+L+ C R MS EEK++LG L +L PE+
Sbjct: 355 QVVEEIDTKKLTEQYLLQLEELDKQLEDLKRQAAPTCSRAMSIEEKRHLGQNLGKLPPEN 414
Query: 217 LCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNN 276
L ++I+A+ NPSF+ + EV++D+DAQ TLWRL+ +VQ L + G
Sbjct: 415 LSHVIQIIAQRNPSFNINSDEVEVDIDAQDPATLWRLQRYVQAVLSGS--------GARQ 466
Query: 277 NNNDDNNNEKDNSNKKNKNNPKRKK 301
+ ++ +NKN+ KR K
Sbjct: 467 TTARNQPTKRSCGYVQNKNSSKRGK 491
>gi|167999165|ref|XP_001752288.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696683|gb|EDQ83021.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 260
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 116/231 (50%), Positives = 159/231 (68%), Gaps = 11/231 (4%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
I+QHKWAWPFM PVDV+GLGLHDYY+VIEKPMD TIKNK+D KDG GY++V+E+ DVR
Sbjct: 2 ISQHKWAWPFMKPVDVKGLGLHDYYDVIEKPMDLGTIKNKLDVKDGLGYQHVQEVCDDVR 61
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL-PKVMEEEKR-QEEEEAKAQLDMQL 159
LVF NAM YN E DV+VM+K+L +KFEEKW L+ PK+ EE KR ++ E +A
Sbjct: 62 LVFSNAMTYNPEGSDVYVMSKTLSDKFEEKWKTLIEPKLQEELKRSHDDSEVQANEGGVP 121
Query: 160 TQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK-----MSTEEKKNLGTALTRLSP 214
E + T K E + + + L+ ++ + KCRK MS EEK++LG +L RL P
Sbjct: 122 VVEEIDTEKVIEQYA----LQVSLDCSQDCALSKCRKIMTRAMSVEEKRHLGQSLGRLPP 177
Query: 215 EDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAAS 265
++L ++I+A+ NPSF+ + EV++D+DAQ TLWRL+ +VQ L ++
Sbjct: 178 DNLSHVIQIIAQKNPSFNINSDEVEVDIDAQDPATLWRLQRYVQAVLSGSA 228
>gi|168062324|ref|XP_001783131.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665381|gb|EDQ52068.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 257
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/238 (49%), Positives = 157/238 (65%), Gaps = 21/238 (8%)
Query: 35 VRQARSF---ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYR 91
+RQ S I+ HKWAWPFM PVDV+GLGLHDYYEVIEKPMD TIKNKMD KD +GY+
Sbjct: 1 MRQVLSILRQISSHKWAWPFMKPVDVKGLGLHDYYEVIEKPMDLGTIKNKMDAKDASGYQ 60
Query: 92 NVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEA 151
+V+E+Y DVRLVF NAMKYN E DV+VM+K+L EKFEEKW K + E K EE +
Sbjct: 61 HVQEVYQDVRLVFSNAMKYNPEGSDVYVMSKTLSEKFEEKW-----KTLVEPKLHEEVDI 115
Query: 152 KAQL---DMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK-CRKMSTEEKKNLGT 207
+ + D+ + L E+D QLE+L++ K R MS EE+++LG
Sbjct: 116 FSGIVDHDLHFLMASTFF---------LEELDKQLEDLKQQATPKLSRAMSVEERRHLGQ 166
Query: 208 ALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAAS 265
+L RL P++L ++I+A+ NPSF+ + EV++D+DAQ TLWRL+ +VQ L +
Sbjct: 167 SLGRLPPDNLSHVIQIIAQKNPSFNMNSDEVEVDIDAQDPATLWRLQRYVQAVLSGSG 224
>gi|302794995|ref|XP_002979261.1| hypothetical protein SELMODRAFT_418860 [Selaginella moellendorffii]
gi|300153029|gb|EFJ19669.1| hypothetical protein SELMODRAFT_418860 [Selaginella moellendorffii]
Length = 700
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 112/241 (46%), Positives = 159/241 (65%), Gaps = 21/241 (8%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+TQHKWAWPFM PVDVEGL LHDYY+VI++PMDF TI+ KM+ KDG+GYR+V+EI DVR
Sbjct: 186 VTQHKWAWPFMQPVDVEGLQLHDYYDVIKRPMDFRTIREKMEAKDGSGYRSVQEIAEDVR 245
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW-LQLLPKVMEEEKRQEEEEAKAQLDMQLT 160
LVF NAM YN+ DV+VMAK+L EKFEEK+ L PK++EE ++++E + ++
Sbjct: 246 LVFSNAMTYNEVGTDVYVMAKTLSEKFEEKYKFVLEPKLLEEGAKRKQEMVELEVHEGEE 305
Query: 161 QEAVQTNK----AKELRSELNEVDMQLENLR----------------ETVIQKCRKMSTE 200
+A + A E+ +LN ++ +LE ++ + ++ CR MS E
Sbjct: 306 AKAAEEVALDRMAHEICKKLNNLEDELEEIKINATSKYRQMLDGFSSYSYLRVCRPMSIE 365
Query: 201 EKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQES 260
EK+ LG +L RL P L + ++I+A+NNPSF+A EV++D+DA TLW+L +VQ
Sbjct: 366 EKRQLGQSLGRLPPTGLNRVIQIIAKNNPSFNAAVAEVEVDIDALDTGTLWQLHCYVQMV 425
Query: 261 L 261
L
Sbjct: 426 L 426
>gi|302813758|ref|XP_002988564.1| hypothetical protein SELMODRAFT_159527 [Selaginella moellendorffii]
gi|300143671|gb|EFJ10360.1| hypothetical protein SELMODRAFT_159527 [Selaginella moellendorffii]
Length = 293
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 108/225 (48%), Positives = 145/225 (64%), Gaps = 31/225 (13%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+TQHKWAWPFM PVDVEGL LHDYY+VI++PMDF TI+ KM+ KDG+GYR+V+EI DVR
Sbjct: 77 VTQHKWAWPFMQPVDVEGLQLHDYYDVIKRPMDFRTIREKMEAKDGSGYRSVQEIAEDVR 136
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW-LQLLPKVMEEEKRQEEEEAKAQLDMQLT 160
LVF NAM YN+ DV+VMAK+L EKFEEK+ L PK++EE K +L LT
Sbjct: 137 LVFSNAMTYNEVGTDVYVMAKTLSEKFEEKYKFVLEPKLLEER--------KLRLIGWLT 188
Query: 161 QEAVQTNKAKEL------RSELNEVDMQLENLRETVIQK----------------CRKMS 198
+ A + + RS+LN ++ +LE ++ + K CR MS
Sbjct: 189 RSAKRYTSCEARVPSHLERSQLNNLEDELEEIKISATSKYRQMLDGFSSYSYLRVCRPMS 248
Query: 199 TEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMD 243
EEK+ LG +L RL P L + ++I+A+NNPSF+A EV++D+D
Sbjct: 249 IEEKRQLGQSLGRLPPTGLNRVIQIIAKNNPSFNAAVAEVEVDID 293
>gi|115466274|ref|NP_001056736.1| Os06g0138000 [Oryza sativa Japonica Group]
gi|113594776|dbj|BAF18650.1| Os06g0138000, partial [Oryza sativa Japonica Group]
Length = 124
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 95/145 (65%), Gaps = 23/145 (15%)
Query: 176 LNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATA 235
L E++ QLE LR+ V+QKCRKM+T EK+ LG L LSPE+L KALE+VA++NPSF A
Sbjct: 1 LIEINKQLEELRQMVVQKCRKMTTYEKRKLGAGLCHLSPEELTKALEMVAQDNPSFEAKG 60
Query: 236 QEVDLDMDAQSELTLWRLKVFVQESL-KAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNK 294
E++LDMDAQSE TLWRLK FV+E+L + A+ +SG +
Sbjct: 61 DELELDMDAQSETTLWRLKFFVREALERQANVASG----------------------RTD 98
Query: 295 NNPKRKKEICDALAKPAVKRTKKLP 319
N KRK+EIC+ALA+ A KR K+ P
Sbjct: 99 ENAKRKREICNALARTASKRVKQQP 123
>gi|413947734|gb|AFW80383.1| hypothetical protein ZEAMMB73_461985 [Zea mays]
gi|413947735|gb|AFW80384.1| hypothetical protein ZEAMMB73_461985 [Zea mays]
Length = 490
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 117/237 (49%), Gaps = 37/237 (15%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK +W F PVD LGLHDY+ +I KPMD T+K+K+ YR+ RE DVR
Sbjct: 140 LMKHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSKLAAGQ---YRSPREFAGDVR 196
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ-LT 160
L F+NAM YN + DVH MA+ LL FEEKWL++ E AQL Q T
Sbjct: 197 LTFRNAMTYNPKGQDVHFMAEQLLNMFEEKWLEI-------------EAELAQLSPQPPT 243
Query: 161 QEAVQTNKAKEL-------RSELN------EVDMQLENLRETVIQKC-------RKMSTE 200
+ K KE+ RS+ E + N R V +K R M+
Sbjct: 244 PSSAAPRKPKEIDNSRALERSDSTVHAAGMEATPKTHNGRPPVSKKPKAREPNKRDMTFW 303
Query: 201 EKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 257
EK+ L L L PE L ++I+ + N S + E+++D+D+ TLW L FV
Sbjct: 304 EKQRLSNNLQDLPPEKLDNVVQIIKKRNSSLNQHDDEIEVDIDSFDVETLWELDRFV 360
>gi|226495673|ref|NP_001142282.1| uncharacterized protein LOC100274451 [Zea mays]
gi|194707994|gb|ACF88081.1| unknown [Zea mays]
Length = 350
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 120/244 (49%), Gaps = 37/244 (15%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+HK +W F PVD LGLHDY+ +I KPMD T+K+K+ YR+ RE DVRL
Sbjct: 2 KHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSKLAAGQ---YRSPREFAGDVRLT 58
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ-LTQE 162
F+NAM YN + DVH MA+ LL FEEKWL++ E AQL Q T
Sbjct: 59 FRNAMTYNPKGQDVHFMAEQLLNMFEEKWLEI-------------EAELAQLSPQPPTPS 105
Query: 163 AVQTNKAKEL-------RSELN------EVDMQLENLRETVIQKC-------RKMSTEEK 202
+ K KE+ RS+ E + N R V +K R M+ EK
Sbjct: 106 SAAPRKPKEIDNSRALERSDSTVHAAGMEATPKTHNGRPPVSKKPKAREPNKRDMTFWEK 165
Query: 203 KNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 262
+ L L L PE L ++I+ + N S + E+++D+D+ TLW L FV K
Sbjct: 166 QRLSNNLQDLPPEKLDNVVQIIKKRNSSLNQHDDEIEVDIDSFDVETLWELDRFVTNYRK 225
Query: 263 AASR 266
+ ++
Sbjct: 226 SITK 229
>gi|242055997|ref|XP_002457144.1| hypothetical protein SORBIDRAFT_03g001920 [Sorghum bicolor]
gi|241929119|gb|EES02264.1| hypothetical protein SORBIDRAFT_03g001920 [Sorghum bicolor]
Length = 482
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 117/238 (49%), Gaps = 39/238 (16%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADV 100
+ +HK +W F PVD LGLHDY+ +I KPMD T+K+K+ G G Y++ RE DV
Sbjct: 148 LMKHKHSWVFNKPVDASALGLHDYHTIITKPMDLGTVKSKL----GAGQYKSPREFAGDV 203
Query: 101 RLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ-L 159
RL F+NAM YN + DVH MA+ LL FEEKW ++ E AQL Q
Sbjct: 204 RLTFQNAMTYNPKGQDVHFMAEQLLNMFEEKWPEI-------------EAEVAQLSPQPP 250
Query: 160 TQEAVQTNKAKEL-------RSELN------EVDMQLENLRETVIQKC-------RKMST 199
T + K KE+ RS+ E + R V++K R M+
Sbjct: 251 TPSSAAPRKPKEIDNSRVLERSDSTVHAAAMEATPKTHTGRPPVLKKPKAREPNKRDMTF 310
Query: 200 EEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 257
EK+ L L L PE L ++I+ + N S E+++D+D+ TLW L FV
Sbjct: 311 WEKQRLSNNLQDLPPEKLDNVVQIIKKRNLSLSQHDDEIEVDIDSFDVETLWELDRFV 368
>gi|47210026|emb|CAF90901.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1594
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 136/284 (47%), Gaps = 31/284 (10%)
Query: 4 ALRSSSKMHFIGKKLLEGGC-KNLSASLLQFFVRQARSFITQH--KWAWPFMHPVDVEGL 60
AL+ S+ H++G L GG L+F R R +++ +AWPF PVDV L
Sbjct: 718 ALQPDSQ-HYLGGGLESGGTLPPKRQEQLRFCARLVREMLSRKHASYAWPFYKPVDVTSL 776
Query: 61 GLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVM 120
GLHDYY++I+ PMD STIK KMD + YR+ +E ADVRL+F N KYN DV M
Sbjct: 777 GLHDYYDIIKHPMDLSTIKKKMDSRQ---YRDAQEFAADVRLMFSNCYKYNPPDHDVVSM 833
Query: 121 AKSLLEKFEEKWLQLLPKVMEEEKRQEEEEA---KAQLDMQLTQEAV------------- 164
A++L + FE ++ + +P EE + A Q+ AV
Sbjct: 834 ARNLQDVFEMRFAK-MPDDPEEAVPVPTPSSALLPAPSTRQVPPPAVSDDSSSSSESECS 892
Query: 165 QTNKAKELRSELNEVDMQL------ENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLC 218
+ KE + L ++ Q + ++CR MS EEK+ L + +L + L
Sbjct: 893 SADSEKERQQRLAQLQEQTAVVSSPDAFGSVSTERCRPMSYEEKRQLSLDINKLPGDKLG 952
Query: 219 KALEIVAENNPSFHAT-AQEVDLDMDAQSELTLWRLKVFVQESL 261
+ + I+ PS ++ E+++D + TL L+ +V L
Sbjct: 953 RVVHIIQTREPSLKSSNPDEIEIDFETLKPSTLRELEKYVSSCL 996
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 24/208 (11%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +++ + +H +AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 460 LQYLLKEVLKSLWKHHFAWPFQAPVDAVKLNLPDYYKIIKTPMDMGTIKRRL---ENNYY 516
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKF---------EEKWLQLLPKVME 141
N +E D +F N YN DD+ +MA++L + F EEK + ++PK
Sbjct: 517 WNAQECIHDFNTMFTNCYIYNKPGDDIVLMAEALEKVFLQKITEMPQEEKEIAVVPKGRR 576
Query: 142 EEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEE 201
+R+ E++ + T A L L + + +
Sbjct: 577 GVRRESGEDSSSPSTTPHTHSAPAFQGPPTL------------ALAQPQPPRVPPTPSSH 624
Query: 202 KKNLGTALTRLSPEDLCKALEIVAENNP 229
+LG L+P+ L + L V + P
Sbjct: 625 APHLGPPYPLLTPDVLAQGLTSVPPSAP 652
>gi|449459556|ref|XP_004147512.1| PREDICTED: transcription factor GTE7-like [Cucumis sativus]
gi|449511376|ref|XP_004163939.1| PREDICTED: transcription factor GTE7-like [Cucumis sativus]
Length = 533
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 125/247 (50%), Gaps = 34/247 (13%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVDV G+GLHDYY+++++PMD ++K K+ GKD Y + + +DVR
Sbjct: 176 LMKHKHGWIFNKPVDVVGMGLHDYYDIVKRPMDLGSVKVKL-GKD--AYESPYDFASDVR 232
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR----QEE--------E 149
L FKNAM YN + DVH MA+ LL +FEE + + + EE++R QEE
Sbjct: 233 LTFKNAMTYNPKGHDVHAMAEQLLVRFEELFRPVAEALEEEDRRFCGYQEELPASSWNHS 292
Query: 150 EAKAQLDMQLTQEAV--QTNKAKELRSELNEVDMQ-----LENLRETVIQKC-------- 194
EA+ + Q+ V +T K S N MQ LR ++
Sbjct: 293 EAERTVKKDNIQKQVVKKTEPMKAPSSSSNPPMMQSPVKTPSPLRAPPVKPLKQPKPRAK 352
Query: 195 ----RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTL 250
R+M+ EEK LG L L PE + + ++I+ + N E++LD++A TL
Sbjct: 353 DPNKREMTLEEKHKLGIGLQSLPPEKMEQVVQIIKKRNGHLKQDGDEIELDIEAVDTETL 412
Query: 251 WRLKVFV 257
W L V
Sbjct: 413 WELDRLV 419
>gi|414875721|tpg|DAA52852.1| TPA: hypothetical protein ZEAMMB73_954621 [Zea mays]
Length = 490
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 119/242 (49%), Gaps = 41/242 (16%)
Query: 40 SFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYA 98
S + +HK +W F PVD LGLHDY+ +I KPMD T+K+K+ G G Y++ RE
Sbjct: 136 SRLMKHKHSWVFNKPVDASALGLHDYHTIITKPMDLGTVKSKL----GAGQYKSPREFAG 191
Query: 99 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ 158
DVRL F+NAM YN + DVH MA+ LL FEEKW ++ E AQL Q
Sbjct: 192 DVRLTFQNAMTYNPKGQDVHFMAEQLLNMFEEKWPEI-------------EAEIAQLSPQ 238
Query: 159 ---LTQEAVQTNKAKEL-------RSELN------EVDMQLENLRETVIQKC-------R 195
+ A + K KE+ RS+ E + R V++K R
Sbjct: 239 PPTPSSAAPKKPKPKEIDNSRPLERSDSTVHAAGIEATPKTHTGRPQVLKKPKAREPNKR 298
Query: 196 KMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKV 255
M+ EK+ L L L PE L ++I+ + N S E+++D+D+ TLW L
Sbjct: 299 DMTFWEKQRLSNNLQDLPPEKLDNVVQIIKKRNLSLSQHDDEIEVDIDSFDVETLWELDR 358
Query: 256 FV 257
FV
Sbjct: 359 FV 360
>gi|222617974|gb|EEE54106.1| hypothetical protein OsJ_00865 [Oryza sativa Japonica Group]
Length = 508
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 129/264 (48%), Gaps = 41/264 (15%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK +W F PVD LGLHDY+ +I KPMD T+K+++ Y++ RE DVR
Sbjct: 153 LMKHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSRLAAGH---YKSPREFAGDVR 209
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ-LT 160
L F+NAM+YN + DVH MA+ LL FEEKW ++ +V AQL Q T
Sbjct: 210 LTFQNAMRYNPKGQDVHFMAEQLLNMFEEKWPEIEAEV-------------AQLSPQPPT 256
Query: 161 QEAVQTNKAKEL-------RSELN------EVDMQLENLRETVIQKC-------RKMSTE 200
+ K KE+ RS+ E + R V++K R+M+
Sbjct: 257 PSSAAPRKPKEIDNSKVLERSDSTVHAAGMEATPKQNTGRPPVLKKPKAREPNKREMTFW 316
Query: 201 EKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQES 260
EK+ L L L PE L ++I+ + N S E+++D+D+ TLW L FV
Sbjct: 317 EKQRLSNNLQELPPEKLDNVVQIIKKRNLSLSQHDDEIEVDIDSFDVETLWELDRFVTNY 376
Query: 261 LKAAS----RSSGDMGGNNNNNND 280
K+ S ++ + G + N+D
Sbjct: 377 KKSISKNKRKAENPVAGQDEMNHD 400
>gi|218187737|gb|EEC70164.1| hypothetical protein OsI_00884 [Oryza sativa Indica Group]
Length = 512
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 129/264 (48%), Gaps = 41/264 (15%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK +W F PVD LGLHDY+ +I KPMD T+K+++ Y++ RE DVR
Sbjct: 103 LMKHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSRLAA---GHYKSPREFAGDVR 159
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ-LT 160
L F+NAM+YN + DVH MA+ LL FEEKW ++ +V AQL Q T
Sbjct: 160 LTFQNAMRYNPKGQDVHFMAEQLLNMFEEKWPEIEAEV-------------AQLSPQPPT 206
Query: 161 QEAVQTNKAKEL-------RSELN------EVDMQLENLRETVIQKC-------RKMSTE 200
+ K KE+ RS+ E + R V++K R+M+
Sbjct: 207 PSSAAPRKPKEIDNSKVLERSDSTVHAAGMEATPKQNTGRPPVLKKPKAREPNKREMTFW 266
Query: 201 EKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQES 260
EK+ L L L PE L ++I+ + N S E+++D+D+ TLW L FV
Sbjct: 267 EKQRLSNNLQELPPEKLDNVVQIIKKRNLSLSQHDDEIEVDIDSFDVETLWELDRFVTNY 326
Query: 261 LKAAS----RSSGDMGGNNNNNND 280
K+ S ++ + G + N+D
Sbjct: 327 KKSISKNKRKAENPVAGQDEMNHD 350
>gi|440790084|gb|ELR11372.1| Bromodomain containing protein [Acanthamoeba castellanii str. Neff]
Length = 844
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 126/247 (51%), Gaps = 29/247 (11%)
Query: 21 GGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKN 80
GG +LS +L Q V ++ +T HK+ WPF PVD L + DY++VI+ PMD TIK
Sbjct: 132 GGPASLSWALKQCQVL-LKTLMT-HKFGWPFNQPVDPIALNIPDYFDVIKHPMDLGTIKE 189
Query: 81 KMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 140
++D Y E DVRLVF N YN D+ VMA +L F EK+ ++L +
Sbjct: 190 QLDSGS---YETEEEFAEDVRLVFTNTFTYNQPGSDIVVMASTLSSLFNEKF-EILKAKI 245
Query: 141 EEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRET---------VI 191
EE R E + L KELR ++ V +LE +++T
Sbjct: 246 EERGRDAPEGVEETL--------------KELRDSMSSVQRELERIKKTPNGRAGRAGAA 291
Query: 192 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLW 251
+ R M+ EEKK L A+ L ++L ++I+ E P ++ +E+++D+DA + TL
Sbjct: 292 EDQRPMTFEEKKKLSHAINNLPSDNLGMVVKIIHERMPQLTSSGEEIEIDIDALNPATLR 351
Query: 252 RLKVFVQ 258
L+ +V+
Sbjct: 352 HLERYVR 358
>gi|168003377|ref|XP_001754389.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694491|gb|EDQ80839.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 694
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 117/230 (50%), Gaps = 10/230 (4%)
Query: 39 RSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 98
R +T HK W F PVD E LGLHDY+ +I+KPMD TIK K+ K Y + E
Sbjct: 260 RKLMT-HKHGWVFNEPVDAEKLGLHDYHSIIKKPMDLGTIKKKLHLKQ---YASPLEFGE 315
Query: 99 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ 158
D+RL F NAM YN DV+VMA+ L FEE W + KV EE +R +EE D
Sbjct: 316 DIRLTFSNAMTYNPVGHDVYVMAELLKNMFEEWWKNMGRKVEEERRRCGKEEEMLANDED 375
Query: 159 LTQEAVQTNKAKE-----LRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLS 213
+E+ + + + R + + R + K R M+ EEK+ L L RL
Sbjct: 376 SVEESGEVRRGERDVVSLTRGKASSRMGSQPKPRPEEVGK-RAMTFEEKRKLSVNLERLP 434
Query: 214 PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKA 263
+ L + ++I+ + NP E+++D+D+ TLW L FV +K+
Sbjct: 435 GDKLERIVQIIKKRNPDLGQNEDEIEVDIDSFDNDTLWELDRFVTNYMKS 484
>gi|356542179|ref|XP_003539547.1| PREDICTED: uncharacterized protein LOC100781720 [Glycine max]
Length = 901
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 131/280 (46%), Gaps = 53/280 (18%)
Query: 12 HFIGKKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEK 71
H +G KLL+ C L L++ HK W F PVDVEGLGLHDY+ +I
Sbjct: 556 HGMGSKLLKS-CSALLEKLMK------------HKHGWVFNAPVDVEGLGLHDYFSIITH 602
Query: 72 PMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
PMD T+K+++ + Y++ +E DVRL F NAM YN + DVH+MA+ LL FEE+
Sbjct: 603 PMDLGTVKSRL---NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLNIFEER 659
Query: 132 WLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDM-QLENLRETV 190
W ++E +E + + + + KA R +DM ++ + E++
Sbjct: 660 WA-----IIESNYYRE-----IRYGLDYGAPSPVSRKAPPFRPP--PIDMRRILDRSESM 707
Query: 191 IQKC------------------------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAE 226
Q R M+ EEK+ L T L L E L ++I+ +
Sbjct: 708 TQPPKIMGITPSSRTPAPKKPKAKDPHKRDMTYEEKQKLSTHLQSLPSEKLDAIVQIIKK 767
Query: 227 NNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 266
N + E+++D+D+ TLW L FV K+ S+
Sbjct: 768 RNSALSQHDDEIEVDIDSVDTETLWELDRFVTNYKKSLSK 807
>gi|356546972|ref|XP_003541893.1| PREDICTED: transcription factor GTE4-like [Glycine max]
Length = 640
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 130/280 (46%), Gaps = 53/280 (18%)
Query: 12 HFIGKKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEK 71
H +G KLL+ C +L L++ HK W F PVDVEGLGLHDY+ +I
Sbjct: 295 HGMGSKLLKS-CSSLLEKLMK------------HKHGWVFDTPVDVEGLGLHDYFSIITH 341
Query: 72 PMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
PMD T+K+++ + YR+ +E DVRL F NAM YN + DVH+MA+ L FEE+
Sbjct: 342 PMDLGTVKSRL---NKNWYRSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLSNIFEER 398
Query: 132 WLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDM-QLENLRETV 190
W ++E +E + + + KA R +DM ++ + E++
Sbjct: 399 WA-----IIESNYNRE-----MTYGLDYGAPSPVSRKAPPFRPP--PIDMRRILDRSESM 446
Query: 191 IQKC------------------------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAE 226
Q R M+ EEK+ L T L L E L ++I+ +
Sbjct: 447 TQPPKIMGITPSSRTPAPKKPKAKDPHKRDMTYEEKQKLSTHLQSLPSEKLDAIVQIIKK 506
Query: 227 NNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 266
N + E+++D+D+ TLW L FV K+ S+
Sbjct: 507 RNSALSQHDDEIEVDIDSVDTETLWELDRFVTNYKKSLSK 546
>gi|225461616|ref|XP_002283002.1| PREDICTED: transcription factor GTE4-like [Vitis vinifera]
Length = 597
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 128/262 (48%), Gaps = 35/262 (13%)
Query: 23 CKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM 82
C NL A L++ HK W F +PVDV+GLGLHDYY +I+ PMDF T+K+++
Sbjct: 259 CSNLLAKLMK------------HKHGWVFNNPVDVKGLGLHDYYSIIKHPMDFGTVKSRL 306
Query: 83 DGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE 142
Y++ RE DVRL +NAM YN + DVH MA+ LL+ FEEKW + +
Sbjct: 307 ---SKNWYKSPREFAEDVRLTLQNAMTYNPKGQDVHCMAEELLKIFEEKWAAIEADLY-- 361
Query: 143 EKRQEEEEAKAQLDMQLTQEAVQTNKAKELR------SELNEVDMQLE-----NLRETVI 191
+ +A + + + E+R S +D L+ ++R V
Sbjct: 362 WRFGMGHDAGTPTPTSRKAPYLHHHHSPEMRTVDRSGSMAMPIDSNLKPGNFAHMRMPVP 421
Query: 192 QKC-------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDA 244
+K R M+ EEK+ L + L L E L ++I+ + N + E+++D+D+
Sbjct: 422 KKPKAKDPHKRDMTYEEKQKLSSNLQSLPSEKLDHIVQIIKKRNSAVSQQDDEIEVDIDS 481
Query: 245 QSELTLWRLKVFVQESLKAASR 266
TLW L +V K+ S+
Sbjct: 482 VDAETLWELDRYVTNYKKSLSK 503
>gi|414875719|tpg|DAA52850.1| TPA: hypothetical protein ZEAMMB73_954621 [Zea mays]
gi|414875720|tpg|DAA52851.1| TPA: hypothetical protein ZEAMMB73_954621 [Zea mays]
Length = 948
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 123/251 (49%), Gaps = 41/251 (16%)
Query: 40 SFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYA 98
S + +HK +W F PVD LGLHDY+ +I KPMD T+K+K+ G G Y++ RE
Sbjct: 136 SRLMKHKHSWVFNKPVDASALGLHDYHTIITKPMDLGTVKSKL----GAGQYKSPREFAG 191
Query: 99 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ 158
DVRL F+NAM YN + DVH MA+ LL FEEKW ++ E AQL Q
Sbjct: 192 DVRLTFQNAMTYNPKGQDVHFMAEQLLNMFEEKWPEI-------------EAEIAQLSPQ 238
Query: 159 ---LTQEAVQTNKAKEL-------RSELN------EVDMQLENLRETVIQKC-------R 195
+ A + K KE+ RS+ E + R V++K R
Sbjct: 239 PPTPSSAAPKKPKPKEIDNSRPLERSDSTVHAAGIEATPKTHTGRPQVLKKPKAREPNKR 298
Query: 196 KMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKV 255
M+ EK+ L L L PE L ++I+ + N S E+++D+D+ TLW L
Sbjct: 299 DMTFWEKQRLSNNLQDLPPEKLDNVVQIIKKRNLSLSQHDDEIEVDIDSFDVETLWELDR 358
Query: 256 FVQESLKAASR 266
FV K+ ++
Sbjct: 359 FVTNYRKSITK 369
>gi|302143389|emb|CBI21950.3| unnamed protein product [Vitis vinifera]
Length = 612
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 118/238 (49%), Gaps = 29/238 (12%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVDV+GLGLHDY+ +I PMD T+K+++ + Y++ RE DVR
Sbjct: 297 LMKHKHGWVFNSPVDVKGLGLHDYFSIITDPMDLGTVKSRL---NKNWYKSPREFAEDVR 353
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L F NAM YN + DVHVMA+ L + FE+KW + E E+ A M +
Sbjct: 354 LTFHNAMTYNPKGQDVHVMAEVLSKIFEDKWAVI-----------EAEKLPAPPPMLPSH 402
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKC-------------RKMSTEEKKNLGTA 208
E + E S VD +++ + T + + R M+ EEK+ L T
Sbjct: 403 EMRRVLDRSE--SMTYAVDPKIKPMNYTPLVRTPSLKKPKAKDPNKRDMTFEEKQKLSTN 460
Query: 209 LTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 266
L L E L + I+ NN + E+++D+D+ TLW L +V K+ S+
Sbjct: 461 LQNLPSEKLDNIVHIIKRNNSALCQDNDEIEVDIDSVDAETLWELDRYVTNYKKSLSK 518
>gi|302142921|emb|CBI20216.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 128/262 (48%), Gaps = 35/262 (13%)
Query: 23 CKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM 82
C NL A L++ HK W F +PVDV+GLGLHDYY +I+ PMDF T+K+++
Sbjct: 129 CSNLLAKLMK------------HKHGWVFNNPVDVKGLGLHDYYSIIKHPMDFGTVKSRL 176
Query: 83 DGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE 142
Y++ RE DVRL +NAM YN + DVH MA+ LL+ FEEKW + +
Sbjct: 177 ---SKNWYKSPREFAEDVRLTLQNAMTYNPKGQDVHCMAEELLKIFEEKWAAIEADLY-- 231
Query: 143 EKRQEEEEAKAQLDMQLTQEAVQTNKAKELR------SELNEVDMQLE-----NLRETVI 191
+ +A + + + E+R S +D L+ ++R V
Sbjct: 232 WRFGMGHDAGTPTPTSRKAPYLHHHHSPEMRTVDRSGSMAMPIDSNLKPGNFAHMRMPVP 291
Query: 192 QKC-------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDA 244
+K R M+ EEK+ L + L L E L ++I+ + N + E+++D+D+
Sbjct: 292 KKPKAKDPHKRDMTYEEKQKLSSNLQSLPSEKLDHIVQIIKKRNSAVSQQDDEIEVDIDS 351
Query: 245 QSELTLWRLKVFVQESLKAASR 266
TLW L +V K+ S+
Sbjct: 352 VDAETLWELDRYVTNYKKSLSK 373
>gi|384247311|gb|EIE20798.1| hypothetical protein COCSUDRAFT_43706 [Coccomyxa subellipsoidea
C-169]
Length = 534
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 113/232 (48%), Gaps = 17/232 (7%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
I HKWAWPF PVD+ DY V++ PMD +K K++G Y E AD R
Sbjct: 100 ILAHKWAWPFADPVDLARYA--DYLNVVKSPMDLKWVKRKVEGGQ---YATPAEFAADFR 154
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW-LQLLPKVMEEEKRQEEEEAKAQLDMQLT 160
LVF NA YN DV+VMA +LL +FE+KW ++PK++E E +EA + +
Sbjct: 155 LVFANAHTYNPPGTDVYVMASTLLARFEDKWNSVVVPKLIEAEVASRSDEAAVR---ERL 211
Query: 161 QEAVQTNKAKELRSELNEVDMQLENLRETVIQK-------CRKMSTEEKKNLGTALTRLS 213
E+ + LR E + E L + + C+ MS K+ L + RLS
Sbjct: 212 SESANARAGEALRGEAARLKGHFETLEARIAESKSLAAAACQPMSISAKRQLLEQMARLS 271
Query: 214 PEDLCKALEIVAENNP-SFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAA 264
E +A+ I+ P + + +E++LD+ LTL +L+ F L A
Sbjct: 272 GEQYEQAIAIILARYPGAANNVGEELNLDLSVADALTLRQLQHFCHVCLHPA 323
>gi|449444709|ref|XP_004140116.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
gi|449516325|ref|XP_004165197.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
Length = 667
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 125/252 (49%), Gaps = 38/252 (15%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK+ W F PVDV+GLGLHDYY +I+ PMD T+K+++ + Y++ +E DVR
Sbjct: 340 LIKHKYGWVFDAPVDVQGLGLHDYYTIIKHPMDLGTVKSRL---NKNWYKSPKEFAEDVR 396
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L F+NAM YN + DV+VMA LL FE++W+ ++E + + E + LD
Sbjct: 397 LTFRNAMTYNPKGQDVYVMADQLLSIFEDRWV-----IIEADYNR---EMRFGLDYGAAL 448
Query: 162 EAVQTNKAKEL------------RSELNEVDMQLEN--LRETVIQKC------------- 194
+ KA+ RSE + +N L T +
Sbjct: 449 STPTSRKARLPPPPPLDMKRILERSESTTYRLDSKNRPLSATPSSRTPAPKKPKAKDPHK 508
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
R M+ EEK+ L + L L E L L+I+ + N + +E+++D+D+ TLW L
Sbjct: 509 RDMTYEEKQKLSSNLQNLPSEKLDAILQIIKKRNSNIFQDDEEIEVDIDSVDAETLWELD 568
Query: 255 VFVQESLKAASR 266
FV K+ S+
Sbjct: 569 RFVTNYKKSLSK 580
>gi|168024468|ref|XP_001764758.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684052|gb|EDQ70457.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 317
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 125/258 (48%), Gaps = 34/258 (13%)
Query: 28 ASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 87
A +L+ R +T HK W F PVD E LGLHDY+ +I+KPMD TIK K+ GK
Sbjct: 75 ADMLKQCTTLLRKLMT-HKHGWVFNEPVDAEKLGLHDYHSIIKKPMDLGTIKKKLHGK-- 131
Query: 88 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK--------- 138
GY + E D+RL F NAM YN DV+VMA+ L FEE W + K
Sbjct: 132 -GYPSPVEFAEDIRLTFANAMTYNPVGHDVYVMAELLKSIFEEWWKNMSRKMEEEKRRAE 190
Query: 139 -----VMEEEKRQEE--EEAKAQLDM-QLTQEAVQTNKAKELRSELNEVDMQLENLRETV 190
++ +E EE E + + D+ LT+ + A + + +EV
Sbjct: 191 KEEEMLLNDEDSVEETGEVRRGERDLSSLTRGKTSSRMASQPKPRPDEVGK--------- 241
Query: 191 IQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTL 250
R M+ EEK+ L L RL + L + ++I+ + NP E+++D+D+ TL
Sbjct: 242 ----RAMTFEEKRKLSVNLERLPGDKLERIVQIIKKRNPDLGQNEDEIEVDIDSFDNDTL 297
Query: 251 WRLKVFVQESLKAASRSS 268
W L FV +K+ + +
Sbjct: 298 WELDRFVTNYMKSRGKKA 315
>gi|255568313|ref|XP_002525131.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223535590|gb|EEF37258.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 742
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 123/252 (48%), Gaps = 38/252 (15%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK+ W F PVDV+GLGLHDY+ +I+ PMD T+K ++ + Y++ E DVR
Sbjct: 410 LMKHKYGWVFKSPVDVKGLGLHDYFTIIKHPMDLGTVKTRL---NKNWYKSPEEFAEDVR 466
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L F NAM+YN + DVHVMA+ LL+ FE++W+ + K + + E + + +
Sbjct: 467 LTFHNAMRYNPKGQDVHVMAEILLKLFEDRWVVI--------KSEFDREMRFVVGCGIGI 518
Query: 162 EAVQTNKAK------ELRSELNEVD---MQLENLRETVIQKC------------------ 194
+ KA ++R L+ D Q + R I
Sbjct: 519 PTPTSRKAPLPPPPLDMRRILDRSDSMRYQPIDPRSKPISTTPSGRTPAPKKPKAKDPHK 578
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
R M+ +EK+ L T L L E L ++I+ + N S E+++D+D+ TLW L
Sbjct: 579 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLSQHDDEIEVDIDSVDAETLWELD 638
Query: 255 VFVQESLKAASR 266
FV K+ S+
Sbjct: 639 RFVTNYKKSLSK 650
>gi|147820894|emb|CAN67478.1| hypothetical protein VITISV_035453 [Vitis vinifera]
Length = 660
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 124/252 (49%), Gaps = 36/252 (14%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVDV+GLGLHDY+ +I PMD T+K+++ + Y++ RE DVR
Sbjct: 318 LMKHKHGWVFNSPVDVKGLGLHDYFSIITDPMDLGTVKSRL---NKNWYKSPREFAEDVR 374
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L F NAM YN + DVHVMA+ L + FE+KW V+E E +E + +M L
Sbjct: 375 LTFHNAMTYNPKGQDVHVMAEVLSKIFEDKW-----AVIEAEYSRELRLG-YEYEMGLPT 428
Query: 162 EAVQTNKAK-------ELRSELNE-------VDMQLENLRETVIQKC------------- 194
+ A E+R L+ VD +++ + T + +
Sbjct: 429 PTSRKLPAPPPMLPSHEMRRVLDRSESMTYAVDPKIKPMNYTPLVRTPSLKKPKAKDPNK 488
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
R M+ EEK+ L T L L E L + I+ NN + E+++D+D+ TLW L
Sbjct: 489 RDMTFEEKQKLSTNLQNLPSEKLDNIVHIIKRNNSALCQDNDEIEVDIDSVDAETLWELD 548
Query: 255 VFVQESLKAASR 266
+V K+ S+
Sbjct: 549 RYVTNYKKSLSK 560
>gi|225446551|ref|XP_002276195.1| PREDICTED: transcription factor GTE4-like [Vitis vinifera]
Length = 654
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 124/252 (49%), Gaps = 36/252 (14%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVDV+GLGLHDY+ +I PMD T+K+++ + Y++ RE DVR
Sbjct: 318 LMKHKHGWVFNSPVDVKGLGLHDYFSIITDPMDLGTVKSRL---NKNWYKSPREFAEDVR 374
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L F NAM YN + DVHVMA+ L + FE+KW V+E E +E + +M L
Sbjct: 375 LTFHNAMTYNPKGQDVHVMAEVLSKIFEDKWA-----VIEAEYSRELRLG-YEYEMGLPT 428
Query: 162 EAVQTNKAK-------ELRSELNE-------VDMQLENLRETVIQKC------------- 194
+ A E+R L+ VD +++ + T + +
Sbjct: 429 PTSRKLPAPPPMLPSHEMRRVLDRSESMTYAVDPKIKPMNYTPLVRTPSLKKPKAKDPNK 488
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
R M+ EEK+ L T L L E L + I+ NN + E+++D+D+ TLW L
Sbjct: 489 RDMTFEEKQKLSTNLQNLPSEKLDNIVHIIKRNNSALCQDNDEIEVDIDSVDAETLWELD 548
Query: 255 VFVQESLKAASR 266
+V K+ S+
Sbjct: 549 RYVTNYKKSLSK 560
>gi|357127683|ref|XP_003565508.1| PREDICTED: transcription factor GTE4-like [Brachypodium distachyon]
Length = 494
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 118/239 (49%), Gaps = 39/239 (16%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVD LGLHDY+ +I KPMD T+K+++ +G Y++ RE +VR
Sbjct: 137 LMKHKHGWVFNVPVDASALGLHDYHTIITKPMDLGTVKSRL--AEGH-YKSPREFATEVR 193
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQL-T 160
L F+NAMKYN + DV+ MA+ LL FEEKW + E AQL Q T
Sbjct: 194 LTFQNAMKYNPKGQDVYFMAEQLLNMFEEKWPDI-------------EAEIAQLSPQPPT 240
Query: 161 QEAVQTNKAKEL-------RSELNEVDMQLENL--------RETVIQKC-------RKMS 198
+ K +E+ RS+ LE R V++K R+M+
Sbjct: 241 PSSAAPKKPREIDNGRVLERSDSTAHAAGLEATPKPHPGTGRPPVLKKPKAREPNKREMT 300
Query: 199 TEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 257
EK+ L L L PE L ++I+ + N S + E+++D+D+ TLW L FV
Sbjct: 301 FWEKQKLSNDLQDLPPEKLDNVVQIIKKRNSSLNQHDDEIEVDIDSFDVETLWELDRFV 359
>gi|145347731|ref|XP_001418315.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578544|gb|ABO96608.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 610
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 126/241 (52%), Gaps = 21/241 (8%)
Query: 30 LLQFFVRQARSFITQ---HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 86
LL+ +Q S + Q HKW +PF PVD + LGL Y E+I +PMD TIK ++ +
Sbjct: 278 LLEIVHKQCLSAVRQLMAHKWGFPFSAPVDPDALGLPTYREIITEPMDLGTIKKLIE--N 335
Query: 87 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV------- 139
G Y E+ ADVRL F NAMK+N+E DVH MA LL+++E KW + ++
Sbjct: 336 GGKYVMAEEVDADVRLTFANAMKFNNEGTDVHTMACGLLDEWEPKWEAIKQRIADVEACV 395
Query: 140 -MEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMS 198
+E + + EA AQ + + + KA E L+ V MQL + V+ R +
Sbjct: 396 LVERDMAVAKNEA-AQRRADVVSKEKECAKASE---ALDLVSMQLREVETQVLALMRPLQ 451
Query: 199 TEEKKNLGTALTRLSPEDL-CKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 257
E++ +L + L R PE L A +I+A N + A A D+ DA +E+TL L +
Sbjct: 452 REDRLDLASDL-RCLPESLRSGAKDIIAANTTGWSAQAHLEDI--DAHNEITLHLLARYT 508
Query: 258 Q 258
+
Sbjct: 509 K 509
>gi|302823131|ref|XP_002993220.1| hypothetical protein SELMODRAFT_431331 [Selaginella moellendorffii]
gi|300138990|gb|EFJ05740.1| hypothetical protein SELMODRAFT_431331 [Selaginella moellendorffii]
Length = 702
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 122/237 (51%), Gaps = 28/237 (11%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ HK AW F PVD LGLHDY++VI +PMD TIK K+ +G YR E DV+
Sbjct: 124 LITHKHAWVFNEPVDAVKLGLHDYHKVIRRPMDLGTIKKKL---EGGHYRTPVEFADDVK 180
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L F NAM YN DV +MA L + F+E+W + K+ EEE+ K +++ ++
Sbjct: 181 LTFSNAMTYNPPGHDVFIMADILRQIFDERWRCIKEKL-------EEEQTKCRVEDEVFA 233
Query: 162 EAVQTNK---AKELRSELNEVDMQLENL-------RETVIQKCRKMSTEEKKNLGTALTR 211
E Q N + L+ L ++ QL +L R + R+M+ EEK LG L +
Sbjct: 234 EIAQGNPNPALQNLKQSLLSIEDQLSSLKKPAGAPRGSKKSGKRQMTYEEKTELGKNLEK 293
Query: 212 L---SPEDLCKALEIV---AENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 262
+ +P D KA EIV ++NP+ + +++D+D TLW L V +K
Sbjct: 294 VLEQNPGD--KADEIVLLLKKHNPNLSQSEDTIEVDIDGIDNDTLWELHKMVASCMK 348
>gi|326496376|dbj|BAJ94650.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 662
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 113/225 (50%), Gaps = 12/225 (5%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK+ W F PVD LGLHDY+ +I+ PMD TIK ++ YR+ +E DVR
Sbjct: 334 LMKHKFGWVFNKPVDPVALGLHDYFAIIKHPMDLGTIKGQLTRGH---YRDPKEFANDVR 390
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKRQEEEEAKAQLDMQL 159
L F NAM YN + DVH MA+ LL FE +W ++ +V + ++ +D++L
Sbjct: 391 LTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEVDYLASCPPLPKKFPPPPIDLRL 450
Query: 160 TQEAVQTNKAKELRSELNEVDMQLENLRETVIQKC-------RKMSTEEKKNLGTALTRL 212
+ + L S+ + ++R ++K R M+ +EK+ L L L
Sbjct: 451 LERSDSLKPHMALDSKSRPISHTPISVRTPSLKKPKAKDLDKRDMTIDEKRKLSNNLQNL 510
Query: 213 SPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 257
PE L ++I+ N S E+++++D+ TLW L FV
Sbjct: 511 PPEKLDIVVQIIKNKNLSVRQHEDEIEVEIDSMDAETLWELDRFV 555
>gi|296088086|emb|CBI35445.3| unnamed protein product [Vitis vinifera]
Length = 564
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 129/270 (47%), Gaps = 44/270 (16%)
Query: 28 ASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 87
ASL++ Q + + +HK +W F PVDV G+GLHDY+++I++PMD T+K+K+
Sbjct: 180 ASLMKL-CGQTLTKLMKHKHSWVFNSPVDVVGMGLHDYHQIIKRPMDLGTVKSKI---AK 235
Query: 88 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQE 147
Y + + ADVRL F NA+ YN + DVHVMA+ LL +FE+ + + K+ E+E+ QE
Sbjct: 236 NLYDSPLDFAADVRLTFDNALLYNPKGHDVHVMAEQLLARFEDLFKPVYNKLEEDERDQE 295
Query: 148 --------------------------EEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDM 181
+ AK MQ+ A ++ ++S M
Sbjct: 296 RIIVGELQGSSWNHIPTPERLKKPSPKPVAKKPERMQVPIPATGSSNPPSVQSVPTPSPM 355
Query: 182 QLENLRETVIQKC--------------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAEN 227
+ ++ + R+MS EEK LG L L E + + ++I+++
Sbjct: 356 RAPPVKPLATRPSSGKQPKPKAKDPNKREMSLEEKHKLGLGLQSLPQEKMDQVVQIISKK 415
Query: 228 NPSFHATAQEVDLDMDAQSELTLWRLKVFV 257
N E++LD++A TLW L V
Sbjct: 416 NGHLTQDGDEIELDIEAVDTETLWELDRLV 445
>gi|303285596|ref|XP_003062088.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
gi|226456499|gb|EEH53800.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
Length = 476
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 147/286 (51%), Gaps = 28/286 (9%)
Query: 8 SSKMHFIG-KKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYY 66
S+ H + K+ LE K AS+ Q + HKW++PF+ PVD LGL +Y+
Sbjct: 49 SAAFHAVAAKRKLEIVSKQCLASVKQ---------VMSHKWSFPFVKPVDAAALGLENYH 99
Query: 67 EVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLE 126
+++++PMD T++ ++ G Y E+ DV L F NAM YN + DVHVMA +L +
Sbjct: 100 DIVKQPMDLGTVRANIE--KGGVYAACEEVNRDVELTFANAMLYNGAQTDVHVMAATLKQ 157
Query: 127 KFEEKWLQLLPKVME-EEKRQEEEEAKAQLDMQLTQEAVQTNKAKELR-----SELNEVD 180
+E +W + KV E +E E+E+ + ++ A QT A+E+R ++L+++
Sbjct: 158 FWEPRWAVIQEKVAEVDESMTAEKESAEKKSAEM--HARQTLAAEEMRCAGLMADLDQLK 215
Query: 181 MQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNP----SFHATAQ 236
LE+L+ T ++ R M EKK L + +L +A +++AE A A+
Sbjct: 216 RSLEDLKRTSVRITRPMDEREKKRLANTMMKLPRRYREEARDVIAETEGEHMVPVEAVAR 275
Query: 237 --EVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNND 280
E+ D+ S + RL +F + + + A+R G +GG + D
Sbjct: 276 WGEILEDLPRFSAVAHRRLALFAKNTRRNATR--GIIGGGHGVEGD 319
>gi|302764766|ref|XP_002965804.1| hypothetical protein SELMODRAFT_406866 [Selaginella moellendorffii]
gi|300166618|gb|EFJ33224.1| hypothetical protein SELMODRAFT_406866 [Selaginella moellendorffii]
Length = 706
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 124/240 (51%), Gaps = 29/240 (12%)
Query: 39 RSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 98
+ IT HK AW F PVD LGLHDY++VI +PMD TIK K++G YR E
Sbjct: 122 KKLIT-HKHAWVFNEPVDAVKLGLHDYHKVIRRPMDLGTIKKKLEGGH---YRTPVEFAD 177
Query: 99 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ 158
DV+L F NAM YN DV +MA L + F+E+W + K+ EEE+ K +++ +
Sbjct: 178 DVKLTFSNAMTYNPPGHDVFIMADILRQIFDERWRCIKEKL-------EEEQTKCRVEDE 230
Query: 159 LTQEAVQTNK---AKELRSELNEVDMQLENL-------RETVIQKCRKMSTEEKKNLGTA 208
+ E Q N + L+ L ++ QL +L R + R+M+ EEK LG
Sbjct: 231 VFAEIAQGNPNPALQNLKQSLLSIEDQLSSLKKPAGAPRGSKKSGKRQMTYEEKTELGKN 290
Query: 209 LTRL---SPEDLCKALEIV---AENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 262
L ++ +P D KA EIV ++NP+ + +++D+D TLW L V +K
Sbjct: 291 LEKVLEQNPGD--KADEIVLLLKKHNPNLSQSEDTIEVDIDGIDNDTLWELHKMVASCMK 348
>gi|449465695|ref|XP_004150563.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
Length = 629
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 120/243 (49%), Gaps = 21/243 (8%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVDVEGL LHDY+ +I PMD T+K +++ Y++ +E DVR
Sbjct: 312 LMKHKHGWVFNTPVDVEGLCLHDYFSIIRHPMDLGTVKTRLNK---NWYKSPKEFAEDVR 368
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEA--KAQLDMQL 159
L F+NAM YN + DVH+MA+ LL+ FE++W+ + +E + E A + ++
Sbjct: 369 LTFQNAMTYNPKGQDVHIMAEQLLKIFEDRWVVIESNYYQEMRLGMEYGAPLPSSNSVRG 428
Query: 160 TQEAVQTNKAKELR---SELNEVDMQLENLRETVIQKC-------------RKMSTEEKK 203
V + K LR S +N D + + + T + R M+ EKK
Sbjct: 429 HPRPVPLDMRKILRRSDSLINPADSRTQPMSVTPSARTPSLKKPKAKDVFKRDMTYNEKK 488
Query: 204 NLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKA 263
L T L L E L L+I+ + N E+++D+D+ TLW L V K+
Sbjct: 489 KLSTNLQNLPSEKLDAILQIIKKRNFELLQQDDEIEVDIDSVDTETLWELDRLVMNYRKS 548
Query: 264 ASR 266
S+
Sbjct: 549 LSK 551
>gi|356545057|ref|XP_003540962.1| PREDICTED: transcription factor GTE4-like [Glycine max]
Length = 874
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 119/242 (49%), Gaps = 20/242 (8%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVDVE LGLHDY+ +I PMD T+K+++ + Y++ +E DVR
Sbjct: 542 LMKHKHGWVFNAPVDVEALGLHDYFTIITHPMDLGTVKSRL---NKNWYKSPKEFAEDVR 598
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L F+NAM YN DVH+MA+ L + FE++W + E + + A A L++
Sbjct: 599 LTFRNAMTYNPPGQDVHIMAEQLSKIFEDRWAIIESDYNREMRYGFDYGAVAPALSPLSR 658
Query: 162 E-AVQTNKAKELRSELNEVDMQLENLRETVIQKC----------------RKMSTEEKKN 204
+ T ++R LN + + R I R M+ EEK+
Sbjct: 659 RVSAFTPPPLDMRRILNRSESMTQTPRLMSITPSSRTPAPKKPKAKDPHKRDMTFEEKQK 718
Query: 205 LGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAA 264
L T L L E L ++I+ + N + + E+++D+D+ TLW L FV K+
Sbjct: 719 LSTNLQSLPSEKLDAIVQIIKKRNSALNQHDDEIEVDIDSVDAETLWELDRFVTNYKKSL 778
Query: 265 SR 266
S+
Sbjct: 779 SK 780
>gi|449526541|ref|XP_004170272.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor GTE4-like
[Cucumis sativus]
Length = 629
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 136/292 (46%), Gaps = 57/292 (19%)
Query: 6 RSSSKMHF---IGKKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGL 62
RS +K ++ +G K+ N SLL+ ++ HK W F PVDVEGL L
Sbjct: 286 RSXAKFNYGFGMGTKIF-----NACVSLLEKLMK--------HKHGWVFNTPVDVEGLCL 332
Query: 63 HDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAK 122
HDY+ +I PMD T+K +++ Y++ +E DVRL F+NAM YN + DVH+MA+
Sbjct: 333 HDYFSIIRHPMDLGTVKTRLNK---NWYKSPKEFAEDVRLTFQNAMTYNPKGQDVHIMAE 389
Query: 123 SLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAK--------ELR- 173
LL+ FE++W+ V+E QE +L M+ +N + ++R
Sbjct: 390 QLLKIFEDRWV-----VIESNYYQE-----MRLGMEYGGPLPSSNSVRGHPRPVPLDMRK 439
Query: 174 ------SELNEVDMQLENLRETVIQKC-------------RKMSTEEKKNLGTALTRLSP 214
S +N D + + + T + R M+ EKK L T L L
Sbjct: 440 ILRRSDSLINPADSRTQPMSVTPSARTPSLKKPKAKDVFKRDMTYNEKKKLSTNLQNLPS 499
Query: 215 EDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 266
E L L+I+ + N E+++D+D+ TLW L V K+ S+
Sbjct: 500 EKLDAILQIIKKRNFELLQQDDEIEVDIDSVDTETLWELDRLVMNYRKSLSK 551
>gi|357141014|ref|XP_003572045.1| PREDICTED: transcription factor GTE4-like [Brachypodium distachyon]
Length = 629
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 21/262 (8%)
Query: 6 RSSSKMHFIGKKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDY 65
RSS+ + ++ L S+SLL S + +HK+ W F PVD LGLHDY
Sbjct: 266 RSSADAGYNSEQRLYSHAFKKSSSLL--------SRLMKHKFGWVFNKPVDPVALGLHDY 317
Query: 66 YEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLL 125
+ +I+ PMD TIK ++ YRN +E DVRL F NAM YN + DVH MA+ LL
Sbjct: 318 FAIIKHPMDLGTIKAQLTRGQ---YRNPKEFADDVRLTFHNAMTYNPKGQDVHFMAEQLL 374
Query: 126 EKFEEKWLQLLPKV--MEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVD-MQ 182
FE +W ++ +V + ++ +D++L + + L S+ +
Sbjct: 375 GIFEAQWPEIQAEVEYLASCPPLPKKFPPPPIDLRLLERSDSLKHHMALDSKSRPLSHTP 434
Query: 183 LENLRETVIQKC-------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATA 235
++R ++K R M+ +EK+ L L L PE L ++I+ N S
Sbjct: 435 TYSVRTPSLKKPKAKDLDKRDMTIDEKRKLSNNLQNLPPEKLDIVVQIIKNKNLSVRQHD 494
Query: 236 QEVDLDMDAQSELTLWRLKVFV 257
E+++++D+ TLW L FV
Sbjct: 495 DEIEVEIDSMDAETLWELDRFV 516
>gi|356515098|ref|XP_003526238.1| PREDICTED: uncharacterized protein LOC100780669 [Glycine max]
Length = 971
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 123/256 (48%), Gaps = 28/256 (10%)
Query: 28 ASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 87
+SLL+ +R HK W F PVDVE LGLHDY+ +I PMD T+K ++ +
Sbjct: 633 SSLLEKLMR--------HKHGWVFNSPVDVETLGLHDYFTIITHPMDLGTVKTRL---NK 681
Query: 88 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQE 147
Y++ +E DVRL F+NAM YN + DVH+MA+ L + FE++W + E +
Sbjct: 682 NWYKSPKEFAEDVRLTFRNAMTYNPQGQDVHIMAELLSKIFEDRWAIIESDYNREMRYGF 741
Query: 148 EEEAKAQLDMQLTQE-AVQTNKAKELRSELNEVDMQLENLRETVIQKC------------ 194
+ A L++ + T ++R L+ D + R I
Sbjct: 742 DYRAAPPAPSPLSRRVSAFTPPPLDMRRILDRSDSMTQTPRLMSITPSSRTPAPKKPKAK 801
Query: 195 ----RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTL 250
R M+ EEK+ L T L L E L ++I+ + N + + E+++D+D+ TL
Sbjct: 802 DPHKRDMTFEEKQKLSTNLQSLPSEKLDAIVQIIKKRNSALNQHDDEIEVDIDSVDAETL 861
Query: 251 WRLKVFVQESLKAASR 266
W L FV K+ S+
Sbjct: 862 WELDRFVTNYKKSLSK 877
>gi|297843426|ref|XP_002889594.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335436|gb|EFH65853.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 767
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 118/245 (48%), Gaps = 38/245 (15%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVDV+GLGL DYY +IE PMD TIK+ + Y++ RE DVR
Sbjct: 432 LMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMK---NLYKSPREFAEDVR 488
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L F NAM YN E DVH+MA +LL+ FEE+W V+E + +E +M L
Sbjct: 489 LTFHNAMTYNPEGQDVHLMAVTLLQIFEERW-----AVIEADYNREMRFVTG-YEMNLPT 542
Query: 162 EAVQTNKAKEL-------RSELNEVD---------------MQLENLRETVIQKC----- 194
+++ + R+ ++ D + R ++K
Sbjct: 543 HTMRSRLGPTMPPPPINVRNTIDRADWSNRQPTTTPGSTPTSATPSGRTPALKKPKANEP 602
Query: 195 --RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWR 252
R M+ EEK+ L L L P+ L ++IV + N + +E+++D+D+ TLW
Sbjct: 603 NKRDMTYEEKQKLSGHLQNLPPDKLDAIVQIVNKRNTAVKLRDEEIEVDIDSVDPETLWE 662
Query: 253 LKVFV 257
L FV
Sbjct: 663 LDRFV 667
>gi|125581496|gb|EAZ22427.1| hypothetical protein OsJ_06088 [Oryza sativa Japonica Group]
Length = 656
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 112/229 (48%), Gaps = 15/229 (6%)
Query: 40 SFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
S + +HK+ W F PVD LGLHDY+ +I+ PMD TIK ++ YRN RE D
Sbjct: 324 SRLMKHKFGWVFNKPVDAVALGLHDYFAIIKHPMDLGTIKTRLTHGQ---YRNPREFADD 380
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKRQEEEEAKAQLDM 157
VRL F NAM YN + DVH MA+ LL FE +W ++ +V + + +D+
Sbjct: 381 VRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEVQYLASCPPLPNKFPPPPIDV 440
Query: 158 QLTQEA-------VQTNKAKELRSELNEVDMQLENL--RETVIQKCRKMSTEEKKNLGTA 208
+ + V +K++ L S + ++ + R M+ +EK+ L
Sbjct: 441 RFLDRSDSVKHHMVLDSKSRPL-SHTPTYSARTPSMKKPKAKDPDKRDMTIDEKRKLSNN 499
Query: 209 LTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 257
L L PE L ++I+ N S E+++++D+ TLW L FV
Sbjct: 500 LQNLPPEKLDVVVQIIKNKNLSVRQHDDEIEVEIDSMDTETLWELDRFV 548
>gi|15221424|ref|NP_172113.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|30679613|ref|NP_849601.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|334182337|ref|NP_001184922.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|75174943|sp|Q9LNC4.1|GTE4_ARATH RecName: Full=Transcription factor GTE4; AltName:
Full=Bromodomain-containing protein GTE4; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E4
gi|8844128|gb|AAF80220.1|AC025290_9 Contains similarity to a Ring3 protein from Homo sapiens gi|133157
and contains a bromodomain PF|00439. EST gb|F14211 comes
from this gene [Arabidopsis thaliana]
gi|332189843|gb|AEE27964.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|332189844|gb|AEE27965.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|332189845|gb|AEE27966.1| global transcription factor group E4 [Arabidopsis thaliana]
Length = 766
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 118/245 (48%), Gaps = 38/245 (15%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVDV+GLGL DYY +IE PMD TIK+ + Y++ RE DVR
Sbjct: 432 LMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMK---NLYKSPREFAEDVR 488
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L F NAM YN E DVH+MA +LL+ FEE+W V+E + +E +M L
Sbjct: 489 LTFHNAMTYNPEGQDVHLMAVTLLQIFEERW-----AVIEADYNREMRFVTG-YEMNLPT 542
Query: 162 EAVQTNKAKEL-------RSELNEVD---------------MQLENLRETVIQKC----- 194
+++ + R+ ++ D + R ++K
Sbjct: 543 PTMRSRLGPTMPPPPINVRNTIDRADWSNRQPTTTPGRTPTSATPSGRTPALKKPKANEP 602
Query: 195 --RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWR 252
R M+ EEK+ L L L P+ L ++IV + N + +E+++D+D+ TLW
Sbjct: 603 NKRDMTYEEKQKLSGHLQNLPPDKLDAIVQIVNKRNTAVKLRDEEIEVDIDSVDPETLWE 662
Query: 253 LKVFV 257
L FV
Sbjct: 663 LDRFV 667
>gi|326489531|dbj|BAK01746.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 510
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 118/234 (50%), Gaps = 21/234 (8%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVD LGLHDY+ +I KPMD T+K+++ Y++ RE +VR
Sbjct: 137 LMKHKHGWVFNVPVDASALGLHDYHTIITKPMDLGTVKSRLAAGH---YKSPREFATEVR 193
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW-------LQLLPKV----MEEEKRQEEEE 150
L F+NAM+YN + DV+ MA+ LL FEEKW QL P+ K+Q++ E
Sbjct: 194 LTFQNAMRYNPKGQDVYFMAEQLLNMFEEKWPEIEAEIAQLSPQPPTPSSAPPKKQKQRE 253
Query: 151 AKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKC-------RKMSTEEKK 203
+ + +M + +++ + Q R V++K R+M+ EK+
Sbjct: 254 REREREMDNARALERSDSTAHAAALEAPPKPQAGTARPPVLKKPKARDPNKREMTFWEKQ 313
Query: 204 NLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 257
L L L E L ++I+ + N S + E+++D+D+ TLW L FV
Sbjct: 314 RLSNDLQDLPAEKLDNVVQIIKKRNSSLNQHDDEIEVDIDSFDVETLWELDRFV 367
>gi|297598920|ref|NP_001046443.2| Os02g0250300 [Oryza sativa Japonica Group]
gi|255670765|dbj|BAF08357.2| Os02g0250300 [Oryza sativa Japonica Group]
Length = 600
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 112/229 (48%), Gaps = 15/229 (6%)
Query: 40 SFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
S + +HK+ W F PVD LGLHDY+ +I+ PMD TIK ++ YRN RE D
Sbjct: 324 SRLMKHKFGWVFNKPVDAVALGLHDYFAIIKHPMDLGTIKTRLTHGQ---YRNPREFADD 380
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKRQEEEEAKAQLDM 157
VRL F NAM YN + DVH MA+ LL FE +W ++ +V + + +D+
Sbjct: 381 VRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEVQYLASCPPLPNKFPPPPIDV 440
Query: 158 QLTQEA-------VQTNKAKELRSELNEVDMQLENL--RETVIQKCRKMSTEEKKNLGTA 208
+ + V +K++ L S + ++ + R M+ +EK+ L
Sbjct: 441 RFLDRSDSVKHHMVLDSKSRPL-SHTPTYSARTPSMKKPKAKDPDKRDMTIDEKRKLSNN 499
Query: 209 LTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 257
L L PE L ++I+ N S E+++++D+ TLW L FV
Sbjct: 500 LQNLPPEKLDVVVQIIKNKNLSVRQHDDEIEVEIDSMDTETLWELDRFV 548
>gi|224146489|ref|XP_002326024.1| global transcription factor group [Populus trichocarpa]
gi|222862899|gb|EEF00406.1| global transcription factor group [Populus trichocarpa]
Length = 393
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 114/247 (46%), Gaps = 36/247 (14%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVDV+GLGLHDY+ +I+ PMD T+K+++ Y++ E DVR
Sbjct: 86 LMKHKHGWVFNTPVDVKGLGLHDYFIIIKHPMDLGTVKSRL---TKNWYKSPEEFAEDVR 142
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEK--------------RQE 147
L F NAMKYN + DVHVMA+ LL+ FE KW + E + R+
Sbjct: 143 LTFHNAMKYNPKGQDVHVMAEQLLDIFETKWAVIKSDYDHEMRFSSSYEVGIPTPTSRKA 202
Query: 148 EEEAKAQLDM--------QLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMST 199
LDM +T + T L L D R M+
Sbjct: 203 PPFVPPPLDMWRILDRSESMTYPIIDTPDPNPLPLHLLAKD-----------PNKRDMTY 251
Query: 200 EEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQE 259
+EK+ L T L L E L ++I+ + + + E+++D+D+ TLW L FV
Sbjct: 252 DEKQKLSTNLQSLPSEKLDNIVQIIKKRSSALSQHDDEIEVDIDSVDVETLWELDRFVTN 311
Query: 260 SLKAASR 266
K+ S+
Sbjct: 312 YKKSLSK 318
>gi|218190413|gb|EEC72840.1| hypothetical protein OsI_06575 [Oryza sativa Indica Group]
Length = 420
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 106/228 (46%), Gaps = 13/228 (5%)
Query: 40 SFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
S + +HK+ W F PVD LGLHDY+ +I+ PMD TIK ++ YRN RE D
Sbjct: 88 SRLMKHKFGWVFNKPVDAVALGLHDYFAIIKHPMDLGTIKTRLTHGQ---YRNPREFADD 144
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKRQEEEEAKAQLDM 157
VRL F NAM YN + DVH MA+ LL FE +W ++ +V + + +D+
Sbjct: 145 VRLTFHNAMTYNPKGQDVHFMAEQLLGIFEVQWPEIEAEVQYLASCPPLPNKFPPPPIDV 204
Query: 158 QLTQEAVQTNKAKELRSELNEVDMQLENLRET--------VIQKCRKMSTEEKKNLGTAL 209
+ + L S+ + T R M+ +EK+ L L
Sbjct: 205 RFLDRSDSVKHHMALDSKSRPLSHTPTYSARTPSMKKPKAKDPDKRDMTIDEKRKLSNNL 264
Query: 210 TRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 257
L PE L ++I+ N S E+++++D+ TLW L FV
Sbjct: 265 QNLPPEKLDVVVQIIKNKNLSVRQHDDEIEVEIDSMDTETLWELDRFV 312
>gi|242061170|ref|XP_002451874.1| hypothetical protein SORBIDRAFT_04g009060 [Sorghum bicolor]
gi|241931705|gb|EES04850.1| hypothetical protein SORBIDRAFT_04g009060 [Sorghum bicolor]
Length = 654
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 12/227 (5%)
Query: 40 SFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
S + +HK+ W F PVD LGLHDY+ +I+ PMD TI+ ++ YRN +E D
Sbjct: 369 SRLMKHKFGWVFNKPVDPVALGLHDYFTIIKHPMDLGTIRGRLSHGQ---YRNPKEFAED 425
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKRQEEEEAKAQLDM 157
VRL F NAM YN + DVH MA+ L FE +W ++ +V + ++ +D+
Sbjct: 426 VRLTFHNAMTYNPKGQDVHFMAEQLSGIFEAQWPEIEAEVNYLASCPPLPKKFPPPPIDL 485
Query: 158 QLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK-------MSTEEKKNLGTALT 210
+ + + L + + R ++K R M+ +EK+ L L
Sbjct: 486 RFLERSDSMRHHMALDTNSRPISHTPTYTRTPSMKKPRAKDPNKRDMTIDEKRKLSENLQ 545
Query: 211 RLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 257
L PE L ++++ N S E+++++D+ TLW L FV
Sbjct: 546 NLPPEKLDAVVQVIKNKNLSVMQHDDEIEVEIDSMDAETLWELDRFV 592
>gi|413936535|gb|AFW71086.1| hypothetical protein ZEAMMB73_942769 [Zea mays]
Length = 671
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 12/227 (5%)
Query: 40 SFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
S + +HK+ W F PVD LGLHDY+ +I+ PMD TI+ ++ YRN +E D
Sbjct: 334 SRLMKHKFGWVFNKPVDPVALGLHDYFTIIKHPMDLGTIRGRLSRGQ---YRNPKEFAED 390
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKRQEEEEAKAQLDM 157
VRL F NAM YN + DVH MA+ L FE +W ++ +V + ++ +D+
Sbjct: 391 VRLTFHNAMTYNPKGQDVHFMAEQLSGIFEAQWPEIEAEVNYLASCPPLPKKFPPPPIDL 450
Query: 158 QLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK-------MSTEEKKNLGTALT 210
+ + L + + R ++K R M+ +EK+ L L
Sbjct: 451 HFLERSDSMRHHMALDTNSRPISHTPTYTRTPSMKKPRAKDPNKRDMTIDEKRKLSENLQ 510
Query: 211 RLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 257
L PE L ++++ N S E+++++D+ TLW L FV
Sbjct: 511 NLPPEKLDAVVQVIKNKNLSVMQHDDEIEVEIDSMDAETLWELDRFV 557
>gi|413936534|gb|AFW71085.1| hypothetical protein ZEAMMB73_942769 [Zea mays]
Length = 667
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 12/227 (5%)
Query: 40 SFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
S + +HK+ W F PVD LGLHDY+ +I+ PMD TI+ ++ YRN +E D
Sbjct: 334 SRLMKHKFGWVFNKPVDPVALGLHDYFTIIKHPMDLGTIRGRLSRGQ---YRNPKEFAED 390
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKRQEEEEAKAQLDM 157
VRL F NAM YN + DVH MA+ L FE +W ++ +V + ++ +D+
Sbjct: 391 VRLTFHNAMTYNPKGQDVHFMAEQLSGIFEAQWPEIEAEVNYLASCPPLPKKFPPPPIDL 450
Query: 158 QLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK-------MSTEEKKNLGTALT 210
+ + L + + R ++K R M+ +EK+ L L
Sbjct: 451 HFLERSDSMRHHMALDTNSRPISHTPTYTRTPSMKKPRAKDPNKRDMTIDEKRKLSENLQ 510
Query: 211 RLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 257
L PE L ++++ N S E+++++D+ TLW L FV
Sbjct: 511 NLPPEKLDAVVQVIKNKNLSVMQHDDEIEVEIDSMDAETLWELDRFV 557
>gi|281209232|gb|EFA83405.1| bromodomain-containing protein [Polysphondylium pallidum PN500]
Length = 1172
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 118/221 (53%), Gaps = 21/221 (9%)
Query: 41 FITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 100
F+ H+ +PF+ PVD L + DY+ I+ PMDF TI+N + DG Y E AD
Sbjct: 541 FLMNHQMGYPFLVPVDPIALNILDYFTYIKHPMDFGTIRNSL--LDGV-YEAPDEFAADC 597
Query: 101 RLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLT 160
RLVF NA YN + VH+MAK+L + FE+K+ + L + E + EE E +L M++
Sbjct: 598 RLVFSNARLYNPPANQVHIMAKTLEDLFEKKYAKALAEPPSPEIQPEESEKIKRLTMEM- 656
Query: 161 QEAVQTNKAKELRSELNEVDMQLENL---RETVIQKCRKMSTEEKKNLGTALTRLSPEDL 217
K + EL + M+ E+ R + R M+ +EK +LG A+ L P +L
Sbjct: 657 ---------KTMTKELEK--MKKESTGGGRGRYREAARPMTLDEKTHLGAAINALHPSNL 705
Query: 218 CKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLKVFV 257
K +++++ TAQ E+++D++ TL RL+ FV
Sbjct: 706 PKLIQVISHT--LDQNTAQEEIEIDLEKLDTGTLRRLEQFV 744
>gi|413925979|gb|AFW65911.1| hypothetical protein ZEAMMB73_814222 [Zea mays]
gi|413925980|gb|AFW65912.1| hypothetical protein ZEAMMB73_814222 [Zea mays]
Length = 665
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 12/227 (5%)
Query: 40 SFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
S + +HK+ W F PVD LGLHDY+ +I+ PMD TI+ ++ YRN +E D
Sbjct: 328 SRLMKHKFGWVFNKPVDPVTLGLHDYFTIIKHPMDLGTIRGRLSRGQ---YRNPKEFAED 384
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKRQEEEEAKAQLDM 157
VRL F NAM YN + DVH MA+ LL FE +W ++ +V + ++ +D+
Sbjct: 385 VRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEVNYLASCPPLPKKFPPPPIDL 444
Query: 158 QLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK-------MSTEEKKNLGTALT 210
+ + + L + + R ++K R M+ +EK+ L L
Sbjct: 445 RFLERSDSMRHHVALDTNSRPISHTPTYTRTPSMKKPRAKDPNKRDMTIDEKRKLSENLQ 504
Query: 211 RLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 257
L P L ++++ N S E+++++D+ TLW L FV
Sbjct: 505 NLPPVKLDAVVQVIKNKNLSVKQHDDEIEVEIDSMDAETLWELDRFV 551
>gi|359475584|ref|XP_003631709.1| PREDICTED: transcription factor GTE2-like [Vitis vinifera]
Length = 561
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 128/286 (44%), Gaps = 60/286 (20%)
Query: 28 ASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 87
ASL++ Q + + +HK +W F PVDV G+GLHDY+++I++PMD T+K+K+
Sbjct: 168 ASLMKL-CGQTLTKLMKHKHSWVFNSPVDVVGMGLHDYHQIIKRPMDLGTVKSKI---AK 223
Query: 88 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQE 147
Y + + ADVRL F NA+ YN + DVHVMA+ LL +FE+ + + K+ E+E+ QE
Sbjct: 224 NLYDSPLDFAADVRLTFDNALLYNPKGHDVHVMAEQLLARFEDLFKPVYNKLEEDERDQE 283
Query: 148 EEE------------------------------------------AKAQLDMQLTQEAVQ 165
AK MQ+ A
Sbjct: 284 RIIVGGGRGGVSAIAGTSGGEELQGSSWNHIPTPERLKKPSPKPVAKKPERMQVPIPATG 343
Query: 166 TNKAKELRSELNEVDMQLENLRETVIQKC--------------RKMSTEEKKNLGTALTR 211
++ ++S M+ ++ + R+MS EEK LG L
Sbjct: 344 SSNPPSVQSVPTPSPMRAPPVKPLATRPSSGKQPKPKAKDPNKREMSLEEKHKLGLGLQS 403
Query: 212 LSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 257
L E + + ++I+++ N E++LD++A TLW L V
Sbjct: 404 LPQEKMDQVVQIISKKNGHLTQDGDEIELDIEAVDTETLWELDRLV 449
>gi|413925981|gb|AFW65913.1| hypothetical protein ZEAMMB73_814222 [Zea mays]
Length = 670
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 12/227 (5%)
Query: 40 SFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
S + +HK+ W F PVD LGLHDY+ +I+ PMD TI+ ++ YRN +E D
Sbjct: 328 SRLMKHKFGWVFNKPVDPVTLGLHDYFTIIKHPMDLGTIRGRLSRGQ---YRNPKEFAED 384
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKRQEEEEAKAQLDM 157
VRL F NAM YN + DVH MA+ LL FE +W ++ +V + ++ +D+
Sbjct: 385 VRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEVNYLASCPPLPKKFPPPPIDL 444
Query: 158 QLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK-------MSTEEKKNLGTALT 210
+ + + L + + R ++K R M+ +EK+ L L
Sbjct: 445 RFLERSDSMRHHVALDTNSRPISHTPTYTRTPSMKKPRAKDPNKRDMTIDEKRKLSENLQ 504
Query: 211 RLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 257
L P L ++++ N S E+++++D+ TLW L FV
Sbjct: 505 NLPPVKLDAVVQVIKNKNLSVKQHDDEIEVEIDSMDAETLWELDRFV 551
>gi|224056335|ref|XP_002298808.1| global transcription factor group [Populus trichocarpa]
gi|222846066|gb|EEE83613.1| global transcription factor group [Populus trichocarpa]
Length = 474
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 138/282 (48%), Gaps = 45/282 (15%)
Query: 37 QARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 96
Q S + +HK + F PVDV G+ LHDY+++I+ PMD T+K+K+ Y + R+
Sbjct: 179 QILSKLMKHKLGYIFNSPVDVVGMQLHDYHDIIKSPMDLGTVKSKLTK---NLYESPRDF 235
Query: 97 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME---EEKRQEEEEAKA 153
ADVRL F NAMKYN + +V+++A+ L +FE+ + + KV E EE+ + +E +A
Sbjct: 236 AADVRLTFNNAMKYNPKGHEVYMLAEQFLTRFEDFYRPIKEKVGEDFDEEENDQVQEVQA 295
Query: 154 --------------QLD---MQLT---------------QEAVQTNKAKELRSELNEVDM 181
Q+D MQ+T Q+ N+ L + + M
Sbjct: 296 SSWDHIRREPERVNQIDDDFMQVTAKSDPIGHQMHQQPLQQPTGLNQNPNLVRTPSPMRM 355
Query: 182 -QLENLRETVIQ----KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ 236
Q++ +++ + R+MS EEK LG L L E + + ++I+ + N
Sbjct: 356 PQVKPVKQPKPKAKDPNKREMSLEEKHKLGVGLQSLPQEKMEQVVQIIRKRNGHLRQEGD 415
Query: 237 EVDLDMDAQSELTLWRLKVFVQESLKAAS--RSSGDMGGNNN 276
E++LD++A TLW L FV K S + MG NNN
Sbjct: 416 EIELDIEAVDTETLWELDRFVTNYKKMVSKIKRQALMGINNN 457
>gi|308800642|ref|XP_003075102.1| Vesicle trafficking protein Sly1 (Sec1 family) (ISS) [Ostreococcus
tauri]
gi|116061656|emb|CAL52374.1| Vesicle trafficking protein Sly1 (Sec1 family) (ISS) [Ostreococcus
tauri]
Length = 1086
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 127/238 (53%), Gaps = 13/238 (5%)
Query: 29 SLLQFFVRQARSFITQ---HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 85
+LL+ +Q + + Q HKW +PF PVD + L L Y E+I++PMD T+KN ++
Sbjct: 129 ALLEVVHKQCLTSVRQLIAHKWGFPFAAPVDPDALDLPTYREIIKEPMDLGTVKNLIE-- 186
Query: 86 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 145
+G Y E+ ADVRL F NAMK+N E DVH MAK LL ++E +W + ++ + E
Sbjct: 187 NGGKYVKAEEVDADVRLTFANAMKFNAEGTDVHAMAKELLVEWETRWATIQQRIADVEAC 246
Query: 146 QE-EEEAKAQLDMQLTQEAVQTNKAKEL---RSELNEVDMQLENLRETVIQKCRKMSTEE 201
E +A + ++ A +K KE ++ V++QL ++ V+ R + ++
Sbjct: 247 CVIERKAAEAKNEAASRRADVVSKEKECSKASEAIDLVNIQLGEVQNQVLALMRPLERDD 306
Query: 202 KKNLGTALTRLSPEDL-CKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQ 258
+ NL + L L PE L A EI+A N + A D+ DA ++LT+ L + +
Sbjct: 307 RLNLASELRSL-PEGLRVGAREIIAANTTGWKPAAHLEDV--DAHNDLTIHLLARYTK 361
>gi|356549487|ref|XP_003543125.1| PREDICTED: uncharacterized protein LOC100802622 [Glycine max]
Length = 531
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 126/277 (45%), Gaps = 37/277 (13%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVDV GL LHDY ++I++PMD T+K+ + Y + +DVR
Sbjct: 162 LIKHKHGWVFKAPVDVVGLKLHDYCDIIKQPMDLGTVKSNL---SKNVYATPADFASDVR 218
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE--EKRQEEEEAKAQLDMQL 159
L F NA+ YN + DV+ MA+ LL +FEE + + K R+ EEE +A Q+
Sbjct: 219 LTFNNALAYNPKGHDVYTMAEQLLARFEELYRPVHEKFEGSIVHDRESEEELQASSWSQV 278
Query: 160 TQEAVQ-----------------TNKAKELRSELNEVDMQLEN-LRETVIQKC------- 194
E V+ + A L + ++ + +R ++
Sbjct: 279 EPERVKKKENPIPPAKLHKEPPPQHPASSSNPPLVQSPVRTPSPMRAPPVKPLKQPKPKA 338
Query: 195 -----RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELT 249
R MS EEK LG L L PE + + ++I+ N E++LD++A T
Sbjct: 339 KDPNKRDMSLEEKHKLGLGLQSLPPEKMEQVVQIIRRRNGHLKQDGDEIELDIEAVDTET 398
Query: 250 LWRLKVFVQESLKAAS--RSSGDMGGNNNNNNDDNNN 284
LW L V K S + MG +NNNND +N
Sbjct: 399 LWELDRLVTNYKKMVSKIKRQALMGNIDNNNNDVQSN 435
>gi|224116690|ref|XP_002317367.1| global transcription factor group [Populus trichocarpa]
gi|222860432|gb|EEE97979.1| global transcription factor group [Populus trichocarpa]
Length = 347
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 124/260 (47%), Gaps = 38/260 (14%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +H++ W F PVDV+ L LHDY+++I+ PMD T+K+++ Y++ +E DVR
Sbjct: 87 LMKHQYGWVFNVPVDVKMLKLHDYFKIIKHPMDLGTVKSRLSK---NWYKSPKEFAEDVR 143
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLD----- 156
L F NAMKYN++ DVH MA +LL+ FEE W + +++ + +A Q
Sbjct: 144 LTFNNAMKYNEKGQDVHTMADTLLKIFEENWANFKAETNFDKRGEMGYDASLQTPASKRA 203
Query: 157 -----------------------MQLTQEAVQTNKAKELRSELNEVDMQ-LENLRETVIQ 192
Q +T + +EL +M+ + R +V +
Sbjct: 204 SGPHASSPACGSASACAPSPAPFQQTMPLETRTLGGTDSLTELGHPNMKAADQGRASVSK 263
Query: 193 KCR------KMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQS 246
K + KM+ EEK+ L +L L E L ++I+ + NP E+++D+D+
Sbjct: 264 KPKKDTDKSKMTYEEKQKLSISLQSLPSEKLESVVQIIRKRNPGLFQQEDEIEVDIDSFD 323
Query: 247 ELTLWRLKVFVQESLKAASR 266
TLW L V K+ S+
Sbjct: 324 NETLWELHSNVTNYRKSISK 343
>gi|255567054|ref|XP_002524509.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223536183|gb|EEF37836.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 553
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 122/260 (46%), Gaps = 36/260 (13%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +H++ W F PVDV+ L LHDY+++I+ PMD T+K+++ Y++ +E DV+
Sbjct: 223 LMKHQYGWVFNKPVDVKKLKLHDYFKIIKHPMDLGTVKSRLKK---NWYKSPKEFAEDVK 279
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE----------- 150
L F NAMKYND+ D H+MA LL+ FEE W + P+ + E+ +
Sbjct: 280 LTFNNAMKYNDKGQDAHIMADVLLKLFEEHWAIIEPEFINNERVDMGYDAGLPRPAPNRA 339
Query: 151 ------------AKAQLDMQLTQEAV---QTNKAKELRSELNEVDMQLENLRETVIQKC- 194
A A L ++ + + K + S + +M R + +K
Sbjct: 340 SAPPAPAPSPVLASAPLRKMPSESKILDRSESMTKPMNSSMKAANMATHEGRLPMSKKPK 399
Query: 195 ------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSEL 248
R+M+ EEK+ L L + + L ++I+ + NP E+++D+D+
Sbjct: 400 EIDPQRREMTFEEKQRLSADLLDMPSDKLDSVVQIIRKRNPGLCQQDDEIEVDIDSFDSE 459
Query: 249 TLWRLKVFVQESLKAASRSS 268
TLW L V K ++ S
Sbjct: 460 TLWELDRLVNNHKKGLTKDS 479
>gi|1588281|prf||2208296A RING3 protein
Length = 509
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 112/221 (50%), Gaps = 4/221 (1%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 203 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 259
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQT 166
KYN DV MA+ L + FE ++ ++ + + E+ A +Q + + +
Sbjct: 260 CYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPEQLRAVHEQLAALSQGPISKPKRKREK 319
Query: 167 NKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAE 226
+ K+ R ++ R MS +EK+ L + +L E L + + I+
Sbjct: 320 KEKKKKRKAKTAPPALPTGYDSEEEEESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQA 379
Query: 227 NNPSFH-ATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 266
PS + +E+++D + TL L+ +V L+ R
Sbjct: 380 REPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPR 420
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 32 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 89 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|449439059|ref|XP_004137305.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
gi|449483310|ref|XP_004156552.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
Length = 538
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 111/232 (47%), Gaps = 19/232 (8%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK+ W F PVD + LGLHDY+++I KPMD TIK ++ + Y++ RE DVR
Sbjct: 242 LMKHKFGWVFNVPVDAKRLGLHDYHKIITKPMDLGTIKMRL---NKNWYKSPREFAEDVR 298
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L F NA+ YN + +DVH+MA+ L FEEKW + K + Q ++ +
Sbjct: 299 LTFSNAITYNPKGEDVHMMAEQLSNIFEEKWKTIEGKQNVGKGFQVDDGSVLPTPTSRKS 358
Query: 162 EAVQTNKAKE---LRSELNEVDMQLENLRETVI-------------QKCRKMSTEEKKNL 205
A+ T + RS+ N ++ + R M+ EEK+ L
Sbjct: 359 PALATRPVESRTFSRSDSTTKHFLTSNPKQPPTDVAPPDKKPKAKNHEIRDMTYEEKQKL 418
Query: 206 GTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 257
L L + L ++I+ + N E++LD+ + TLW L+ FV
Sbjct: 419 SIDLQDLPSDKLNNVVKIIKKRNQGLFQNDDEIELDIGSVDSETLWELERFV 470
>gi|330792873|ref|XP_003284511.1| hypothetical protein DICPUDRAFT_75494 [Dictyostelium purpureum]
gi|325085541|gb|EGC38946.1| hypothetical protein DICPUDRAFT_75494 [Dictyostelium purpureum]
Length = 1321
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 117/224 (52%), Gaps = 15/224 (6%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+H A PF+ PVD LG+ DY+ I++PMDF TIKN + G G Y + E DVRLV
Sbjct: 660 EHPQAGPFLVPVDPYALGILDYFNFIKRPMDFGTIKNSIVG--GV-YHTIDEFAEDVRLV 716
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQL-----DMQ 158
F NA YN + VH+MAK+L + FEEK+ P+V+EE +E + K + D +
Sbjct: 717 FSNAKAYNPPANLVHIMAKTLEDLFEEKF----PQVIEEPDESDETQDKVNVSNVNKDSR 772
Query: 159 LTQEAVQTNKAKELRSELNEVDMQLENLRETVI--QKCRKMSTEEKKNLGTALTRLSPED 216
+ + + + + + +K +++ EEK LG+ +T+L E
Sbjct: 773 RKPSSSSPSSSHSSSKRRSSTSSSRSSSSRSSSNRKKLPEITMEEKTKLGSEITQLPVEY 832
Query: 217 LCKALEIVAENNP-SFHATAQEVDLDMDAQSELTLWRLKVFVQE 259
L K L+I+ N H +EV++D++ + TL RL FV++
Sbjct: 833 LPKILQIIHNTNSLPDHDPNEEVEIDLNNFDDDTLRRLNRFVEQ 876
>gi|412993064|emb|CCO16597.1| bromodomain containing 2 [Bathycoccus prasinos]
Length = 1076
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 105/211 (49%), Gaps = 19/211 (9%)
Query: 29 SLLQFFVRQARSFITQ---HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 85
SLL RQ + + Q H W PF PVD LGL +Y+ +I PMD TIK ++
Sbjct: 498 SLLDVVHRQCLAAVRQVMSHDWGGPFRMPVDAVALGLANYHTIITNPMDLGTIKKFIE-- 555
Query: 86 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEK- 144
DG Y +E++ DV L F NAMK+N E DVHVMAK+LL + K+ ++ + E E+
Sbjct: 556 DGGKYELAKEVHEDVELTFNNAMKFNAEGTDVHVMAKTLLALWHTKYEGIVAREKEVEEG 615
Query: 145 --------RQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK 196
+ A ++L+ Q Q QT + L QL +L I +
Sbjct: 616 LLLDRDACIAKAAAAASKLEYQTIQSECQT-----IMQALGLAQNQLSDLELKSIVLFKP 670
Query: 197 MSTEEKKNLGTALTRLSPEDLCKALEIVAEN 227
M+ +EK LG L L+ ED KA +I+++
Sbjct: 671 MTADEKSALGDILKSLTAEDSEKARQILSDG 701
>gi|302848828|ref|XP_002955945.1| hypothetical protein VOLCADRAFT_119228 [Volvox carteri f.
nagariensis]
gi|300258671|gb|EFJ42905.1| hypothetical protein VOLCADRAFT_119228 [Volvox carteri f.
nagariensis]
Length = 569
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 121/229 (52%), Gaps = 16/229 (6%)
Query: 16 KKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDF 75
K++LE + A ++Q A ITQHKWA+PF +PVD DY ++I PMDF
Sbjct: 71 KRILEHNHRIRLAEVVQKHCSTALKSITQHKWAFPFNNPVDTARF--PDYPKIISSPMDF 128
Query: 76 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
STIK + +DG YR+ ++ ++DV LVF NA +YN D ++MA++L E EEK+ ++
Sbjct: 129 STIKAR---QDGGYYRDPKDWWSDVMLVFSNAKRYNAPGSDCYLMAQTLQEVSEEKYDKV 185
Query: 136 L-PKVMEEEKRQEEEEA-----KAQLDMQLTQEAVQTNKAK--ELRSELNEVDMQLENLR 187
+ P++ E E EE +A+L Q EA+ A L +EL+ + ++L
Sbjct: 186 IAPRLAEAEAVTLREEVHLKKKRAELVNQQISEAMDAQCAVLFNLMAELHAAIREAKSLA 245
Query: 188 ETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ 236
++ C ++ EEK+ L + L L + VA +P +T +
Sbjct: 246 SSL---CEPLTLEEKQALAATIQGLPTAQLEAIVAFVASRHPPSVSTCE 291
>gi|449438275|ref|XP_004136914.1| PREDICTED: uncharacterized protein LOC101209352 [Cucumis sativus]
gi|449521741|ref|XP_004167888.1| PREDICTED: uncharacterized protein LOC101228592 [Cucumis sativus]
Length = 539
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 128/277 (46%), Gaps = 31/277 (11%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ + K+ F PVDV GLGLHDYY++I+ PMD T+K+ + Y + + DVR
Sbjct: 180 LMKQKYGLIFNKPVDVVGLGLHDYYDIIKHPMDLGTVKSTLSK---NLYDSPLDFAEDVR 236
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKRQEEEEAKAQLDMQL 159
L F NAM+YN + +VH++A+ L KFEE +L + K+ +++ EEE + +
Sbjct: 237 LTFNNAMRYNPKGHEVHILAEQWLVKFEEMFLPVSRKLGALKQPDPYEEELQSSSWNHVE 296
Query: 160 TQEAV----QTNKAKE--LRSELNEVDMQLENLRETVIQKC------------------R 195
E V NK E + S L + +R + R
Sbjct: 297 EVENVNFNSNGNKPVEVVVPSSLTKPPSVQSPVRTPSPVRAPQVKPVKQPKPKAKDPNKR 356
Query: 196 KMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKV 255
MS EEK LG L L PE + + ++IV + + E++LD++A TLW L
Sbjct: 357 DMSLEEKHRLGIGLQGLPPEKMDQVIQIVKKRSGHLRQDGDEIELDIEAVDTETLWELDR 416
Query: 256 FVQESLKAASRSSGDMGGNNNNNNDDN--NNEKDNSN 290
V K S+ N+N N D N NNE + N
Sbjct: 417 LVTNWKKMMSKVKRQALINDNTNADSNKENNEISSVN 453
>gi|359491054|ref|XP_002279401.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor GTE10-like
[Vitis vinifera]
Length = 770
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 119/221 (53%), Gaps = 23/221 (10%)
Query: 40 SFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
S + H++ W F +PVDV L + DY+ VI+ PMD TIK+KM + Y + + AD
Sbjct: 220 SRLMTHQFGWIFNNPVDVVELKIPDYFTVIKHPMDLGTIKSKMASGE---YLSPFDFAAD 276
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL---LPKVMEEEKRQEEEEAKAQLD 156
VRL F NAM YN +DVH MA++L + FE +W + LP ++ E +A +++
Sbjct: 277 VRLTFSNAMTYNPRGNDVHFMAETLNKFFEMRWKPIEKKLPVTIDVESLPSRSDAHLEIE 336
Query: 157 MQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRL---S 213
T + + +K K++ +++ M+ R M+ EE+ NLGT L L
Sbjct: 337 ---TADRMPPSKKKKVAPTDHKIKMEPNK---------RIMTKEERHNLGTELETLLGEL 384
Query: 214 PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
P+D+ L+ + N A+ E+++D+DA S+ TL+ L+
Sbjct: 385 PDDIVDFLKEQSFNE--NQASEDEIEIDIDALSDDTLFTLR 423
>gi|413919577|gb|AFW59509.1| bromodomain containing protein [Zea mays]
Length = 447
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 121/261 (46%), Gaps = 20/261 (7%)
Query: 16 KKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDF 75
+ +L G + +L + RS W F PV+VE LGLHDY+ VI++PMD
Sbjct: 98 RAVLRGAMRKRCGQILSRLRKDKRSV-------W-FNAPVEVERLGLHDYHAVIKRPMDL 149
Query: 76 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
T+K +G Y + + ADVRL F NA++YN +VH A +LL FE + +
Sbjct: 150 GTVK---EGLAAGRYASHDDFAADVRLTFTNALRYNPVGHEVHTFAGALLAYFERMYKEA 206
Query: 136 LPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCR 195
L + EE KR E A +L + ++ V M+ RE R
Sbjct: 207 LVCLEEERKRLEPPRPVAA---ELPPPPAVEPVEAKAKTRAGNVRMRKPKAREP---NKR 260
Query: 196 KMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKV 255
+MS EEK L L L E + L+IV + N + E++LD+D T W L
Sbjct: 261 EMSLEEKNMLRLGLVSLPEEKMHNVLQIVRKRNNNPEMLGDEIELDIDEMDVETQWELDR 320
Query: 256 FVQ---ESLKAASRSSGDMGG 273
FV ++LK + R++ GG
Sbjct: 321 FVTNFNKALKKSQRAAMLNGG 341
>gi|226530258|ref|NP_001151218.1| bromodomain containing protein [Zea mays]
gi|195645110|gb|ACG42023.1| bromodomain containing protein [Zea mays]
Length = 447
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 121/261 (46%), Gaps = 20/261 (7%)
Query: 16 KKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDF 75
+ +L G + +L + RS W F PV+VE LGLHDY+ VI++PMD
Sbjct: 98 RAVLRGAMRKRCGQILSRLRKDKRSV-------W-FNAPVEVERLGLHDYHAVIKRPMDL 149
Query: 76 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
T+K +G Y + + ADVRL F NA++YN +VH A +LL FE + +
Sbjct: 150 GTVK---EGLAAGRYASHDDFAADVRLTFTNALRYNPVGHEVHTFAGALLAYFERMYKEA 206
Query: 136 LPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCR 195
L + EE KR E A +L + ++ V M+ RE R
Sbjct: 207 LVCLEEERKRLEPPRPVA---AELPPPPAVEPVEAKAKTRAGNVRMRKPKAREP---NKR 260
Query: 196 KMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKV 255
+MS EEK L L L E + L+IV + N + E++LD+D T W L
Sbjct: 261 EMSLEEKNMLRLGLVSLPEEKMHNVLQIVRKRNNNPEMLGDEIELDIDEMDVETQWELDR 320
Query: 256 FVQ---ESLKAASRSSGDMGG 273
FV ++LK + R++ GG
Sbjct: 321 FVTNFNKALKKSQRAAMLNGG 341
>gi|224103835|ref|XP_002313212.1| global transcription factor group [Populus trichocarpa]
gi|222849620|gb|EEE87167.1| global transcription factor group [Populus trichocarpa]
Length = 224
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 114/230 (49%), Gaps = 19/230 (8%)
Query: 37 QARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 96
Q S + + K + F PVDV GL LHDY+++I+ PMD T+K + Y + R+
Sbjct: 7 QILSKLMKQKLGYIFNTPVDVVGLQLHDYHDIIKNPMDLGTVKTNLSK---NLYESPRDF 63
Query: 97 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLD 156
ADVRL F NAMKYN + +V+++A+ L +F++ + + +EK+Q+ +
Sbjct: 64 AADVRLTFNNAMKYNPKGHEVYILAEQFLTRFQDLYRPI------KEKQQQPTGMNQNPN 117
Query: 157 MQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPED 216
T ++ + K L+ + + N RE M+ EEK LG L L E
Sbjct: 118 SVRTPSPMRVPQVKPLKQP--KPKAKDPNKRE--------MNLEEKHKLGVGLQSLPQEK 167
Query: 217 LCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 266
+ + ++I+ + N E++LD++A TLW L FV K S+
Sbjct: 168 MEQVVQIIRKRNGHLRQEGDEIELDIEAVDTETLWELDRFVTNYKKMVSK 217
>gi|297850172|ref|XP_002892967.1| hypothetical protein ARALYDRAFT_312744 [Arabidopsis lyrata subsp.
lyrata]
gi|297338809|gb|EFH69226.1| hypothetical protein ARALYDRAFT_312744 [Arabidopsis lyrata subsp.
lyrata]
Length = 482
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 138/310 (44%), Gaps = 82/310 (26%)
Query: 15 GKKLLEGGCKNLSASLLQFFVRQARSFITQ---HKWAWPFMHPVDVEGLGLHDYYEVIEK 71
GKK G K +Q F + S +T+ HK AW F PVD EGLGLHDY+ ++++
Sbjct: 118 GKKSGHGAEK----GTVQIF-KNCNSLLTKLMKHKCAWVFHVPVDAEGLGLHDYHNIVKE 172
Query: 72 PMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
PMD T+K K+ GK+ Y++ + DVRL F NA+ YN DVH A+ LL FE+K
Sbjct: 173 PMDLGTVKTKL-GKN--LYKSPLDFAEDVRLTFNNAILYNPVGHDVHRFAELLLNMFEDK 229
Query: 132 WLQL-------------------------LPKVME----------------------EEK 144
W+ + + ++E E
Sbjct: 230 WVSIEMQYDNLHRKFKPTRDIEFPAPASTIAPIVEPLPAVPTPPSPSPPPPPQPPVLENT 289
Query: 145 RQEEEEAKAQLDMQLTQEAVQT--NKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEK 202
E EE+ + + + EAV T +KA+E + +N D+ L EEK
Sbjct: 290 TWEREES---MTIPVEPEAVTTAPDKAEEEEAPVNNRDLTL----------------EEK 330
Query: 203 KNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV---QE 259
+ L L L + L ++I+ ++NP E++LD+D+ TLW L FV +E
Sbjct: 331 RRLSEELQDLPYDKLETVVQIIKKSNPELSQQDDEIELDIDSLDINTLWELYRFVTGYKE 390
Query: 260 SLKAASRSSG 269
SL + + G
Sbjct: 391 SLSKKNEAQG 400
>gi|328865269|gb|EGG13655.1| bromodomain-containing protein [Dictyostelium fasciculatum]
Length = 1155
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 123/224 (54%), Gaps = 26/224 (11%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
++ H+ ++PF+ PVD LG+ DY++V++ PMDF TI+N + G Y+ + E D R
Sbjct: 463 LSNHQHSYPFLAPVDPVALGILDYFDVVKHPMDFGTIRNLL--LSGV-YQEMEEFAIDCR 519
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW--LQLLPKVMEEEKRQEEEEAKAQLDMQL 159
LVF NA YN + VH+MA +L + FE K+ LQ P + E+ EEE K +L
Sbjct: 520 LVFSNAKDYNPPNNPVHIMAITLEDIFERKYSKLQNTPNLETAEEVSEEERIK-----KL 574
Query: 160 TQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCK 219
T+E K ++ EL ++ RE+ K +M+ EEK LGT ++ L PE L
Sbjct: 575 TEE------NKHMQKELEKMK------RESRKPKQPQMTLEEKTQLGTNISFLPPERLRD 622
Query: 220 ALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLKVFVQESLK 262
+ IV+ P+ TAQ E+ +D++ TL +++ FV L+
Sbjct: 623 LISIVSHTLPN---TAQDEIVIDLEKLDNSTLRKMEQFVFSCLR 663
>gi|295828222|gb|ADG37780.1| AT1G06230-like protein [Neslia paniculata]
Length = 210
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVDV+GLGLHDY+ +IE PMD TIK+ + Y++ RE DVR
Sbjct: 113 LMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNM---YKSPREFADDVR 169
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
L F NAM YN DVHVMA++LL+ FEE+W
Sbjct: 170 LTFHNAMTYNPAGQDVHVMAETLLQIFEERW 200
>gi|432855679|ref|XP_004068304.1| PREDICTED: bromodomain testis-specific protein-like [Oryzias
latipes]
Length = 969
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 91/176 (51%), Gaps = 23/176 (13%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGL DY+++I++PMD STIK KMD ++ Y N E ADVRL+F N
Sbjct: 277 YAWPFYTPVDAIALGLQDYHDIIKQPMDLSTIKKKMDHQE---YTNATEFAADVRLMFSN 333
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE----KRQEEEEAKAQLDMQL-TQ 161
+YN V MA+ L E FE +++++ E E RQ + KA L T
Sbjct: 334 CYRYNPPSHGVVYMARKLQEVFEARYMKM---SQEPEGCPVSRQPGDTGKADRVGSLSTS 390
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDL 217
+ +T E S EV+ QL +L E + K +GT L RL+ E L
Sbjct: 391 ASSETEGPSEQESSSKEVNTQLAHLEERL------------KAVGTQLARLTQEPL 434
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
L + R + +H+++WPF PVD L + DYY++I+ PMD T+ ++ + Y
Sbjct: 33 LLYLERVVIKALWRHQYSWPFRQPVDAVALCIPDYYKLIKHPMDLGTVMQRLKNR---YY 89
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D+ +F N YN DD+ MA++L + F +K Q+
Sbjct: 90 WEANECIKDISTMFNNCYVYNRPGDDIVFMAQTLEKIFLQKVSQM 134
>gi|297842055|ref|XP_002888909.1| hypothetical protein ARALYDRAFT_316265 [Arabidopsis lyrata subsp.
lyrata]
gi|297334750|gb|EFH65168.1| hypothetical protein ARALYDRAFT_316265 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 117/250 (46%), Gaps = 22/250 (8%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVD LGLHDY+ ++EKPMD T+K ++ + Y++ E DVR
Sbjct: 125 LMKHKSGWVFNTPVDAVRLGLHDYHTIVEKPMDLGTVKTRL---SKSWYKSPLEFAEDVR 181
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-----LPKVMEEEKRQEEEEAKAQLD 156
L F NAM YN DVH MA+ LL FEEKW L L ++ R + A +
Sbjct: 182 LTFNNAMLYNPVGHDVHHMAEFLLNLFEEKWAPLETQYGLLNRKQQPVRDIDLHAPVSTN 241
Query: 157 MQ----------LTQEAVQTNKAKELRSELNEV-DMQLENLRETVIQKC---RKMSTEEK 202
V+ + S N V L + E +++ R ++ +EK
Sbjct: 242 THNIEPFPLPPPPPPTVVENRTLERAESITNPVKPAVLPVVPEKPVEEASADRDLTFDEK 301
Query: 203 KNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 262
+ L L L + L ++I+ ++NP E++LD+D+ TLW L FV E +
Sbjct: 302 RRLSEDLQDLPYDKLEAVVQIIKKSNPELSQQDDEIELDIDSLDLETLWELYRFVTEYKE 361
Query: 263 AASRSSGDMG 272
+S+ + G
Sbjct: 362 RSSKKKEEHG 371
>gi|242009661|ref|XP_002425601.1| Bromodomain-containing protein, putative [Pediculus humanus
corporis]
gi|212509494|gb|EEB12863.1| Bromodomain-containing protein, putative [Pediculus humanus
corporis]
Length = 803
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 72/133 (54%), Gaps = 9/133 (6%)
Query: 3 LALRSSSKMHFIGKKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGL 62
+ L S K+ L K+ + L + F R+ +AWPF PVD E LGL
Sbjct: 333 IGLPPSGPTSGSSKEKLSESLKSCNEILKELFSRK------HAGYAWPFYKPVDAELLGL 386
Query: 63 HDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAK 122
HDY+E+I+KPMD T+K KMD + YR E ADVRL+F N KYN DV MA+
Sbjct: 387 HDYHEIIKKPMDLGTVKTKMDNRQ---YRTASEFAADVRLIFTNCYKYNPSTHDVVAMAR 443
Query: 123 SLLEKFEEKWLQL 135
L + FE ++ ++
Sbjct: 444 KLQDVFEMRYAKI 456
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
L F + + HK+AWP + PVD + L L DY+ +I++PMD +TIK +++ Y
Sbjct: 57 LAFIQKNVIKAVCAHKYAWPLLEPVDAKKLNLPDYHRIIKQPMDLTTIKKRLEN---NYY 113
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
N +E D +F N YN ++DV VMA+ ++EK + LPK
Sbjct: 114 WNAKECIQDFNTMFTNCYVYNQPQEDVVVMAQ-IVEKLFLTKISTLPK 160
>gi|339245937|ref|XP_003374602.1| putative bromodomain protein [Trichinella spiralis]
gi|316972199|gb|EFV55887.1| putative bromodomain protein [Trichinella spiralis]
Length = 847
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVDVEGLGLHDYY+VIE PMD T++ K++ ++ Y + E ADVRL+F N
Sbjct: 388 YAWPFYKPVDVEGLGLHDYYDVIEVPMDLGTVRRKLECRE---YGSPSEFAADVRLIFSN 444
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+YN +V MAK++ E FE+++ QL
Sbjct: 445 CYRYNPPDHEVVKMAKTISEIFEQRFAQL 473
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
L+F ++ + +HK +WPF PVD L L DY+++I++PMD TI+ ++ Y
Sbjct: 102 LEFMQKEVLRAVLRHKHSWPFSKPVDAAKLNLVDYHDIIKRPMDLGTIEKRL---RNCYY 158
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ ++ D +F N YN D+ VMA++L + F EK +
Sbjct: 159 YSSQQSMQDFMTMFTNCYTYNPPGSDIVVMAQALEKVFLEKIAHM 203
>gi|295828214|gb|ADG37776.1| AT1G06230-like protein [Capsella grandiflora]
gi|295828218|gb|ADG37778.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVDV+GLGLHDY+ +IE PMD TIK+ + Y++ RE DVR
Sbjct: 113 LMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNX---YKSPREFADDVR 169
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
L F NAM YN DVH+MA++LL+ FEE+W
Sbjct: 170 LTFHNAMTYNPAGQDVHLMAETLLQIFEERW 200
>gi|295828212|gb|ADG37775.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVDV+GLGLHDY+ +IE PMD TIK+ + Y++ RE DVR
Sbjct: 113 LMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNI---YKSPREFADDVR 169
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
L F NAM YN DVH+MA++LL+ FEE+W
Sbjct: 170 LTFHNAMTYNPAGQDVHLMAETLLQIFEERW 200
>gi|449440580|ref|XP_004138062.1| PREDICTED: transcription factor GTE10-like [Cucumis sativus]
gi|449501388|ref|XP_004161353.1| PREDICTED: transcription factor GTE10-like [Cucumis sativus]
Length = 781
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 109/216 (50%), Gaps = 17/216 (7%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H + W F PVDV L + DY+ VI+ PMD T+K+K+ + Y + + ADVR
Sbjct: 216 LMSHTFGWVFNTPVDVVKLNIPDYFTVIKHPMDLGTVKSKLTAGE---YTHPLDFAADVR 272
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL---LPKVMEEEKRQEEEEAKAQLDMQ 158
L F NAM YN +DVH MAK+L + FE +W + P EE+++ A +
Sbjct: 273 LTFSNAMTYNPPANDVHTMAKTLSKFFEVRWKTIEKKFPTTTEEQRQV----PSATTVPK 328
Query: 159 LTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLC 218
+ A+ K+ + N+ D+Q ++ + M+ +EK L L L E
Sbjct: 329 EAESALPVPPPKKTKFPTNDPDVQPTSV-------VKVMTDQEKHKLSVELEALLGELPE 381
Query: 219 KALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
+ + E++ + A E+++D+DA S+ TL+ L+
Sbjct: 382 SIINFLKEHSSNSQAGEDEIEIDIDALSDDTLFALR 417
>gi|345288391|gb|AEN80687.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288393|gb|AEN80688.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288395|gb|AEN80689.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288397|gb|AEN80690.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288399|gb|AEN80691.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288401|gb|AEN80692.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288403|gb|AEN80693.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288405|gb|AEN80694.1| AT1G06230-like protein, partial [Capsella rubella]
Length = 197
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVDV+GLGLHDY+ +IE PMD TIK+ + Y++ RE DVR
Sbjct: 109 LMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNM---YKSPREFADDVR 165
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
L F NAM YN DVH+MA++LL+ FEE+W
Sbjct: 166 LTFHNAMTYNPAGQDVHLMAETLLQIFEERW 196
>gi|295828216|gb|ADG37777.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVDV+GLGLHDY+ +IE PMD TIK+ + Y++ RE DVR
Sbjct: 113 LMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNM---YKSPREFADDVR 169
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
L F NAM YN DVH+MA++LL+ FEE+W
Sbjct: 170 LTFHNAMTYNPAGQDVHLMAETLLQIFEERW 200
>gi|295828210|gb|ADG37774.1| AT1G06230-like protein [Capsella grandiflora]
gi|295828220|gb|ADG37779.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVDV+GLGLHDY+ +IE PMD TIK+ + Y++ RE DVR
Sbjct: 113 LMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNM---YKSPREFADDVR 169
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
L F NAM YN DVH+MA++LL+ FEE+W
Sbjct: 170 LTFHNAMTYNPAGQDVHLMAETLLQIFEERW 200
>gi|307213342|gb|EFN88794.1| Homeotic protein female sterile [Harpegnathos saltator]
Length = 1514
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 64/96 (66%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+E+I+KPMD T+K+KMD ++ Y+ +E +D
Sbjct: 413 FSKKHSGYAWPFYKPVDAELLGLHDYHEIIKKPMDLGTVKSKMDNRE---YKTAQEFASD 469
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV MA+ L + FE ++ ++
Sbjct: 470 VRLIFTNCYKYNPPDHDVVSMARKLQDIFEMRYAKI 505
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF ++ + +H++AWPF PVD + L L DY+++IE+PMD TIK ++ + T Y
Sbjct: 63 LQFLLKGVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIERPMDLGTIKKRL---ENTYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ +E D +F N YN +DV VMA++L + F K Q+
Sbjct: 120 WSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQM 164
>gi|217074676|gb|ACJ85698.1| unknown [Medicago truncatula]
Length = 471
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 135/310 (43%), Gaps = 53/310 (17%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
W F PV+ L LHDY+++I+ PMD T+K+K+ Y E DV+L FKNA
Sbjct: 166 TWIFNTPVNATALNLHDYFDIIKHPMDLGTVKSKLAK---NAYSTPAEFADDVKLTFKNA 222
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE--------------EKRQEEEEAK- 152
+ YN + DV+ A LLEKFEE + + K E+ E +E E+ K
Sbjct: 223 LTYNPKGHDVNTAAMQLLEKFEELYRPIQEKFDEKSFDDELQASSWNHVEPEREREKVKK 282
Query: 153 -----------AQLDMQLTQEAVQTNKAKELRSELNEVDMQLEN-LRETVIQKC------ 194
A+ L + A +N+ +L + +++ + +R ++
Sbjct: 283 KDNPIPIPPPVAKRQESLPEPASTSNQPSTSNPQLAQSPVRIPSPMRALPVKPLKQPKPK 342
Query: 195 ------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSEL 248
R+M+ EEK LG L L PE + + ++I+ + N E++LDM+A
Sbjct: 343 ARDPNKREMNVEEKHKLGLGLQILPPEKMEQVVQIIRKRNGHLEQDGDEIELDMEAVDTE 402
Query: 249 TLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALA 308
TLW L V K S+ +NNN SNK N P R+K DA
Sbjct: 403 TLWELDRLVTNWKKMVSKIKRQALMDNNNV---------PSNKGNGELPDREK--VDATP 451
Query: 309 KPAVKRTKKL 318
K+ KK+
Sbjct: 452 PSEGKKQKKI 461
>gi|357474555|ref|XP_003607562.1| Bromodomain-containing factor [Medicago truncatula]
gi|355508617|gb|AES89759.1| Bromodomain-containing factor [Medicago truncatula]
Length = 980
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 68/115 (59%), Gaps = 6/115 (5%)
Query: 21 GGCKNLSASLLQFFVRQARSFI---TQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFST 77
GG L + F + S + +H++AW F PVDV+GLGLHDY+ +I PMD T
Sbjct: 642 GGDMGLGLQMGSKFFKSCSSLLEKLMKHQYAWVFNTPVDVDGLGLHDYFTIITNPMDLGT 701
Query: 78 IKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
+K ++ + Y++ +E DVRL F NAM YN + DVH MA+ L + FE++W
Sbjct: 702 VKTRL---NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHAMAEQLSKIFEDRW 753
>gi|357476127|ref|XP_003608349.1| Bromodomain-containing protein [Medicago truncatula]
gi|355509404|gb|AES90546.1| Bromodomain-containing protein [Medicago truncatula]
Length = 533
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 135/310 (43%), Gaps = 53/310 (17%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
W F PV+ L LHDY+++I+ PMD T+K+K+ Y E DV+L FKNA
Sbjct: 166 TWIFNTPVNATALNLHDYFDIIKHPMDLGTVKSKLAK---NAYSTPAEFADDVKLTFKNA 222
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE--------------EKRQEEEEAK- 152
+ YN + DV+ A LLEKFEE + + K E+ E +E E+ K
Sbjct: 223 LTYNPKGHDVNTAAMQLLEKFEELYRPIQEKFDEKSFDDELQASSWNHVEPEREREKVKK 282
Query: 153 -----------AQLDMQLTQEAVQTNKAKELRSELNEVDMQLEN-LRETVIQKC------ 194
A+ L + A +N+ +L + +++ + +R ++
Sbjct: 283 KDNPIPIPPPVAKRQESLPEPASTSNQPSTSNPQLAQSPVRIPSPMRALPVKPLKQPKPK 342
Query: 195 ------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSEL 248
R+M+ EEK LG L L PE + + ++I+ + N E++LDM+A
Sbjct: 343 ARDPNKREMNVEEKHKLGLGLQILPPEKMEQVVQIIRKRNGHLEQDGDEIELDMEAVDTE 402
Query: 249 TLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALA 308
TLW L V K S+ +NNN SNK N P R+K DA
Sbjct: 403 TLWELDRLVTNWKKMVSKIKRQALMDNNNV---------PSNKGNGELPDREK--VDATP 451
Query: 309 KPAVKRTKKL 318
K+ KK+
Sbjct: 452 PSEGKKQKKI 461
>gi|119624070|gb|EAX03665.1| bromodomain containing 2, isoform CRA_c [Homo sapiens]
Length = 552
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 112/223 (50%), Gaps = 24/223 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 262 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 318
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK--VMEEEKRQEEEEAKAQLDMQLTQEAV 164
KYN DV MA+ L + + L L + + + ++++E++E K + + A+
Sbjct: 319 CYKYNPPDHDVVAMARKLQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKPPPAL 378
Query: 165 QTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIV 224
T E E R MS +EK+ L + +L E L + + I+
Sbjct: 379 PTGYDSEEEEE------------------SRPMSYDEKRQLSLDINKLPGEKLGRVVHII 420
Query: 225 AENNPSFH-ATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 266
PS + +E+++D + TL L+ +V L+ R
Sbjct: 421 QAREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPR 463
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|356554838|ref|XP_003545749.1| PREDICTED: transcription factor GTE11-like [Glycine max]
Length = 536
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 111/261 (42%), Gaps = 39/261 (14%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVDV GL L DYY+VI++PMD T+K+ + Y + +DVR
Sbjct: 165 LMKHKHGWIFNAPVDVVGLQLTDYYDVIKQPMDLGTVKSNLSMNK---YTTPSDFASDVR 221
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE--EKRQEEEEAKAQ----- 154
L F NA+ YN + DV+ +A+ LL +FEE + L K R+ EEE +A
Sbjct: 222 LTFNNALAYNPKGHDVYTVAELLLTRFEELYRPLHEKFEGSVGHDRESEEELQASSWSHV 281
Query: 155 -----------------LDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKC--- 194
+L QE Q + L +R ++
Sbjct: 282 EPERVKKKENPTPPPPPPPEKLQQEPPQPPASSSNPPLLQSPVRTPSPMRAPPVKPLKQP 341
Query: 195 ---------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQ 245
R MS EEK LG L L PE + + ++I+ N E++LD++A
Sbjct: 342 KPKAKDPNKRDMSLEEKHKLGLGLQSLPPEKMEQVVQIIRRRNGHLKQDGDEIELDIEAV 401
Query: 246 SELTLWRLKVFVQESLKAASR 266
TLW L V K S+
Sbjct: 402 DTETLWELDRLVTNYKKMVSK 422
>gi|350416103|ref|XP_003490841.1| PREDICTED: homeotic protein female sterile-like isoform 1 [Bombus
impatiens]
Length = 1486
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y+ +E +D
Sbjct: 423 FSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNRE---YKTAQEFASD 479
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV MA+ L + FE ++ ++
Sbjct: 480 VRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKI 515
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H++AWPF PVD + L L DY+++I++PMD TIK ++ + T Y
Sbjct: 71 LQFLQKGVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRL---ENTYY 127
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ +E D +F N YN +DV VMA++L + F K Q+
Sbjct: 128 WSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQM 172
>gi|324500947|gb|ADY40429.1| Bromodomain-containing protein 2 [Ascaris suum]
Length = 976
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 69/113 (61%), Gaps = 12/113 (10%)
Query: 23 CKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM 82
C+ + + + F ++ +SF WPF+ PVDVEGL LHDYY+++++PMD TI+ KM
Sbjct: 176 CQRI---ISELFSKKCKSFT------WPFLEPVDVEGLKLHDYYDIVKQPMDLGTIRRKM 226
Query: 83 DGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ K Y + E+ D+ LV +N KYN D VH K+L + FEEKW Q+
Sbjct: 227 EAKQ---YASPEEMREDLLLVCENCFKYNPPSDPVHQHGKTLQKYFEEKWRQM 276
>gi|328788637|ref|XP_624214.3| PREDICTED: hypothetical protein LOC551826 [Apis mellifera]
Length = 1492
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y+ +E +D
Sbjct: 423 FSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNRE---YKTAQEFASD 479
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV MA+ L + FE ++ ++
Sbjct: 480 VRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKI 515
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H++AWPF PVD + L L DY+++I++PMD TIK ++ + T Y
Sbjct: 71 LQFLQKGVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRL---ENTYY 127
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ +E D +F N YN +DV VMA++L + F K Q+
Sbjct: 128 WSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQM 172
>gi|383859381|ref|XP_003705173.1| PREDICTED: homeotic protein female sterile-like [Megachile
rotundata]
Length = 1489
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y+ +E +D
Sbjct: 423 FSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNRE---YKTAQEFASD 479
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV MA+ L + FE ++ ++
Sbjct: 480 VRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKI 515
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H++AWPF PVD + L L DY+++I++PMD TIK ++ + T Y
Sbjct: 71 LQFLQKGVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRL---ENTYY 127
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ +E D +F N YN +DV VMA++L + F K Q+
Sbjct: 128 WSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQM 172
>gi|350416106|ref|XP_003490842.1| PREDICTED: homeotic protein female sterile-like isoform 2 [Bombus
impatiens]
Length = 1452
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y+ +E +D
Sbjct: 389 FSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNRE---YKTAQEFASD 445
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV MA+ L + FE ++ ++
Sbjct: 446 VRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKI 481
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H++AWPF PVD + L L DY+++I++PMD TIK ++ + T Y
Sbjct: 63 LQFLQKGVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRL---ENTYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ +E D +F N YN +DV VMA++L + F K Q+
Sbjct: 120 WSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQM 164
>gi|307182453|gb|EFN69688.1| Homeotic protein female sterile [Camponotus floridanus]
Length = 1541
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 71/121 (58%), Gaps = 9/121 (7%)
Query: 15 GKKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMD 74
GK+ L K+ + L + F ++ S+ AWPF PVD E LGLHDY+E+I+KPMD
Sbjct: 428 GKEKLSEALKSCNDILKELFAKKHSSY------AWPFYKPVDAELLGLHDYHEIIKKPMD 481
Query: 75 FSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
T+K KMD + Y+ E +DVRL+F N KYN DV MA+ L + FE ++ +
Sbjct: 482 LGTVKAKMDNRQ---YKTAHEFASDVRLIFTNCYKYNPPDHDVVSMARKLQDIFEMRYAK 538
Query: 135 L 135
+
Sbjct: 539 V 539
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H++AWPF PVD + L L DY+++I+KPMD TIK ++ + + Y
Sbjct: 94 LQFLQKGVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKKPMDLGTIKKRL---ENSYY 150
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ +E D +F N YN +DV VMA++L + F K Q+
Sbjct: 151 WSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQM 195
>gi|354487577|ref|XP_003505948.1| PREDICTED: bromodomain-containing protein 2-like [Cricetulus
griseus]
gi|344253000|gb|EGW09104.1| Bromodomain-containing protein 2 [Cricetulus griseus]
Length = 752
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 61/89 (68%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 321 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 377
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV VMA+ L + FE ++ ++
Sbjct: 378 CYKYNPPDHDVVVMARKLQDVFEFRYAKM 406
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 32 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 89 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|348538983|ref|XP_003456969.1| PREDICTED: hypothetical protein LOC100693386 [Oreochromis
niloticus]
Length = 1432
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD + LGLHDY+E+I+ PMD STIK K+D + YR+ +E ADVRL+F N
Sbjct: 453 YAWPFYKPVDAKALGLHDYHEIIKHPMDLSTIKKKLDNRQ---YRDAQEFAADVRLMFSN 509
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 510 CYKYNPPDHDVVAMARKLQDVFEMRFAKM 538
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H +AWPF PVD L L DYY++I+ PMD TIK +++ Y
Sbjct: 82 LQYLQKVVLKTLWKHNFAWPFQAPVDAIKLNLPDYYKIIKSPMDMGTIKKRLENN---YY 138
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
N +E D +F N YN DD+ +MA++L + F +K ++
Sbjct: 139 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKITEM 183
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
+C+ MS EEK+ L + +L + L + + I+ PS ++ E+++D + TL
Sbjct: 702 RCKPMSYEEKRQLSLDINKLPGDKLGRVVHIIQTREPSLKNSNPDEIEIDFETLKPSTLR 761
Query: 252 RLKVFVQESLKAASRSSG 269
L+ +V L+ + SG
Sbjct: 762 ELEKYVSSCLRKKKKPSG 779
>gi|348513555|ref|XP_003444307.1| PREDICTED: bromodomain-containing protein 2-like [Oreochromis
niloticus]
Length = 810
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I PMD STIK KMD ++ Y N +E ADVRL+F N
Sbjct: 283 YAWPFYVPVDAAALGLHDYHDIITHPMDLSTIKKKMDQRE---YGNAKEFAADVRLMFSN 339
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN ++V MA+ L E FE ++L+L
Sbjct: 340 CYKYNPPSNEVVHMARKLQEVFEARYLKL 368
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 7/113 (6%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H+++WPF PVD L L DYY +I PMD TIK ++ + Y
Sbjct: 32 LQYLEKVVLQALWRHQYSWPFHQPVDAVALCLPDYYTIITNPMDLGTIKKRL---KNSYY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
+ D +F N YN DD+ MAK+L E+ +LQ L K+ +EE
Sbjct: 89 WQAVDCIDDFNTMFTNCYVYNQPGDDIVFMAKTL----EKLFLQKLSKMPQEE 137
>gi|327264790|ref|XP_003217194.1| PREDICTED: bromodomain-containing protein 4-like [Anolis
carolinensis]
Length = 1344
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ +D YR+ +E AD
Sbjct: 367 FAKKHAAYAWPFYKPVDVEALGLHDYRDIIKHPMDLSTIKSKLENRD---YRDAQEFAAD 423
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 424 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 459
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H+++WPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLKVVLKTLWKHQFSWPFQQPVDAVKLQLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
N +E D +F N YN DD+ +MA++L E+ +LQ + ++ +EE
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL----EKLFLQKISEMTQEE 168
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 192 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTL 250
+KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 608 EKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKASTL 667
Query: 251 WRLKVFVQESLK 262
L+ +V L+
Sbjct: 668 RELERYVTSCLR 679
>gi|324500843|gb|ADY40384.1| Bromodomain-containing protein 2 [Ascaris suum]
Length = 1194
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 66/106 (62%), Gaps = 9/106 (8%)
Query: 30 LLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 89
+ + F ++ +SF WPF+ PVDVEGL LHDYY+++++PMD TI+ KM+ K
Sbjct: 382 ISELFSKKCKSFT------WPFLEPVDVEGLKLHDYYDIVKQPMDLGTIRRKMEAKQ--- 432
Query: 90 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
Y + E+ D+ LV +N KYN D VH K+L + FEEKW Q+
Sbjct: 433 YASPEEMREDLLLVCENCFKYNPPSDPVHQHGKTLQKYFEEKWRQM 478
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
L+F +++ +HK AWPF PVD L L DY++VI++PMD +TI+ ++ Y
Sbjct: 119 LEFILKEVLKPAMRHKHAWPFTKPVDAVRLSLPDYHKVIKRPMDMNTIEKRL---RNVYY 175
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
+ ++ D +F N K+N DDV +M K++ + EK ++LLP
Sbjct: 176 YSAKDCMQDFEAIFANCYKFNQNEDDVSLMCKNIENLYREK-IKLLP 221
>gi|159491100|ref|XP_001703511.1| Ring3 protein [Chlamydomonas reinhardtii]
gi|158280435|gb|EDP06193.1| Ring3 protein [Chlamydomonas reinhardtii]
Length = 429
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 12/206 (5%)
Query: 30 LLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 89
++Q QA I QHKWA+PF PVD DY +V+ PMDFST++N+ +
Sbjct: 88 IVQKHCSQALKAIMQHKWAFPFNTPVDTSRF--VDYLKVVATPMDFSTVRNRTEAGY--- 142
Query: 90 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL-PKVMEEEKRQEE 148
YR+ ++ ++DV LVF NA +YN D H+MA++L E EEK+ +L+ P++ EE +
Sbjct: 143 YRDPKDWWSDVMLVFSNAKRYNAPGSDCHLMAQTLQEVSEEKYEKLIAPRLAEEAAVTQR 202
Query: 149 EEA-----KAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKK 203
EE +A+L +A+ + L + E+ + + C ++ EEK+
Sbjct: 203 EELHLRKRRAELANGQVADAMDA-QCGMLFGLMAELHAAIREAKSMAASLCEPLTLEEKQ 261
Query: 204 NLGTALTRLSPEDLCKALEIVAENNP 229
L + L L + VA +P
Sbjct: 262 ALAATIQGLPTAQLESIVAFVASRHP 287
>gi|345488357|ref|XP_001603224.2| PREDICTED: hypothetical protein LOC100119446 isoform 1 [Nasonia
vitripennis]
Length = 1549
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y E AD
Sbjct: 401 FSKKHSSYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKVKMDKRE---YNTASEFAAD 457
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV MAK L + FE ++ ++
Sbjct: 458 VRLIFTNCYKYNPPDHDVVAMAKKLQDVFEMRYAKI 493
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H++AWPF PVD + L L DY+++I+ MD TIK ++ + T Y
Sbjct: 63 LQFLQKGVLKPLWKHQFAWPFQQPVDAKKLNLPDYHKIIKHSMDLGTIKKRL---ENTYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ +E D+ +F N YN +DV VMA++L F K Q+
Sbjct: 120 WSGKECVQDLNTMFTNCYVYNKPGEDVVVMAQTLERLFLTKVAQM 164
>gi|410958888|ref|XP_003986045.1| PREDICTED: bromodomain-containing protein 2 isoform 3 [Felis catus]
Length = 684
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 248 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 304
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 305 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 333
>gi|345488355|ref|XP_003425886.1| PREDICTED: hypothetical protein LOC100119446 isoform 2 [Nasonia
vitripennis]
gi|345488361|ref|XP_003425888.1| PREDICTED: hypothetical protein LOC100119446 isoform 4 [Nasonia
vitripennis]
Length = 1555
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y E AD
Sbjct: 407 FSKKHSSYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKVKMDKRE---YNTASEFAAD 463
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV MAK L + FE ++ ++
Sbjct: 464 VRLIFTNCYKYNPPDHDVVAMAKKLQDVFEMRYAKI 499
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H++AWPF PVD + L L DY+++I+ MD TIK ++ + T Y
Sbjct: 69 LQFLQKGVLKPLWKHQFAWPFQQPVDAKKLNLPDYHKIIKHSMDLGTIKKRL---ENTYY 125
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ +E D+ +F N YN +DV VMA++L F K Q+
Sbjct: 126 WSGKECVQDLNTMFTNCYVYNKPGEDVVVMAQTLERLFLTKVAQM 170
>gi|403261526|ref|XP_003923169.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 680
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 248 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 304
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 305 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 333
>gi|345488359|ref|XP_003425887.1| PREDICTED: hypothetical protein LOC100119446 isoform 3 [Nasonia
vitripennis]
Length = 1549
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y E AD
Sbjct: 407 FSKKHSSYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKVKMDKRE---YNTASEFAAD 463
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV MAK L + FE ++ ++
Sbjct: 464 VRLIFTNCYKYNPPDHDVVAMAKKLQDVFEMRYAKI 499
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H++AWPF PVD + L L DY+++I+ MD TIK ++ + T Y
Sbjct: 69 LQFLQKGVLKPLWKHQFAWPFQQPVDAKKLNLPDYHKIIKHSMDLGTIKKRL---ENTYY 125
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ +E D+ +F N YN +DV VMA++L F K Q+
Sbjct: 126 WSGKECVQDLNTMFTNCYVYNKPGEDVVVMAQTLERLFLTKVAQM 170
>gi|395832116|ref|XP_003789122.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Otolemur
garnettii]
Length = 680
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 248 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 304
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 305 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 333
>gi|356554832|ref|XP_003545746.1| PREDICTED: uncharacterized protein LOC100819363 [Glycine max]
Length = 529
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 36/258 (13%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVD+ GL LHDY ++I++PMD T+K+ + Y + +DVR
Sbjct: 159 LMKHKHGWVFNAPVDIVGLKLHDYCDIIKQPMDLGTVKSNL---SKNVYATPADFASDVR 215
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME--EEKRQEEEEAKAQ----- 154
L F NA+ YN + DV+ MA+ LL +FEE + + K R+ EEE +A
Sbjct: 216 LTFNNALAYNPKGHDVYTMAEQLLARFEELYRPVHEKFEGSISHDRESEEELQASSWSHV 275
Query: 155 ------------------LDMQLTQEAVQTNKAKELRSEL-NEVDMQLENLRETVIQKC- 194
L + ++ L+S + M++ ++ K
Sbjct: 276 EPERVKKKEKPPPPPPAKLQQEPPLPPASSSNPPLLQSPVRTPSPMRVPPVKPLKQPKPK 335
Query: 195 ------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSEL 248
R MS EEK LG L L PE + + ++I+ N E++LD++A
Sbjct: 336 AKDPNKRDMSLEEKHKLGLGLQSLPPEKMEQVVQIIRRRNGHLKQDGDEIELDIEAVDTE 395
Query: 249 TLWRLKVFVQESLKAASR 266
TLW L V K S+
Sbjct: 396 TLWELDRLVTNYKKMVSK 413
>gi|297661253|ref|XP_002809177.1| PREDICTED: bromodomain-containing protein 2 isoform 4 [Pongo
abelii]
Length = 681
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 248 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 304
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 305 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 333
>gi|332823728|ref|XP_001167922.2| PREDICTED: bromodomain-containing protein 2 isoform 7 [Pan
troglodytes]
Length = 680
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 248 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 304
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 305 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 333
>gi|426352679|ref|XP_004043837.1| PREDICTED: bromodomain-containing protein 2 isoform 3 [Gorilla
gorilla gorilla]
gi|52545711|emb|CAH56208.1| hypothetical protein [Homo sapiens]
gi|119624067|gb|EAX03662.1| bromodomain containing 2, isoform CRA_a [Homo sapiens]
Length = 681
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 248 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 304
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 305 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 333
>gi|444732332|gb|ELW72633.1| Bromodomain testis-specific protein [Tupaia chinensis]
Length = 556
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 119/235 (50%), Gaps = 32/235 (13%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 245 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKRKMDNQE---YKDAYEFAADVRLMFMN 301
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV------------------MEEEKRQEE 148
KYN +V MA+ L K + LQ+L +V + R +
Sbjct: 302 CYKYNPPDHEVVSMARMLQLKAVHQQLQVLSQVPFRKLKKKNEKSKREKKKAKVTNRDDN 361
Query: 149 EEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTA 208
KA+ M+L +E Q+N+ K+ + ++ + +N + M+ +EK+ L
Sbjct: 362 PRKKAK-QMKL-KEKPQSNQPKKRKQQVFALKSDEDN--------AKPMNYDEKRKLSLD 411
Query: 209 LTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLWRLKVFVQESLK 262
+ +L + L + + I+ PS ++ E+++D + TL L+ +V L+
Sbjct: 412 INKLPGDKLGRVVHIIQSREPSLRNSNPDEIEIDFETLKASTLRELEKYVAACLR 466
>gi|432847788|ref|XP_004066150.1| PREDICTED: uncharacterized protein LOC101159647 [Oryzias latipes]
Length = 1469
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD + LGLHDY+++I+ PMD STIK K+D + YR+ +E ADVRL+F N
Sbjct: 452 YAWPFYKPVDAKALGLHDYHDIIKHPMDLSTIKKKLDNRQ---YRDAQEFAADVRLMFSN 508
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 509 CYKYNPPDHDVVSMARKLQDVFEMRFAKM 537
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H +AWPF PVD LGL DYY++I+ PMD TIK ++ + Y
Sbjct: 42 LQYLHKVVLKTLWKHHFAWPFQAPVDAVKLGLPDYYKIIKTPMDMGTIKKRL---ENNYY 98
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
N +E D +F N YN DD+ +MA++L + F +K ++
Sbjct: 99 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKITEM 143
>gi|149732108|ref|XP_001496282.1| PREDICTED: bromodomain-containing protein 2-like [Equus caballus]
Length = 804
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|441594234|ref|XP_004092963.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 2
[Nomascus leucogenys]
Length = 682
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 248 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 304
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 305 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 333
>gi|355561582|gb|EHH18214.1| hypothetical protein EGK_14770 [Macaca mulatta]
Length = 862
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 428 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 484
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 485 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 513
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + +
Sbjct: 139 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENSYC 195
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEK 144
E D+ +F N YN DD+ +MA++L E+ +LQ + + +EE+
Sbjct: 196 WAASECMEDLNTMFTNCYIYNKPTDDIVLMAQTL----EKIFLQKVASMPQEEQ 245
>gi|255540327|ref|XP_002511228.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223550343|gb|EEF51830.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 759
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 128/242 (52%), Gaps = 34/242 (14%)
Query: 33 FFVRQARSFITQ---HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 89
++Q + +++ H++AW F +PVDVE L + DY+ VI+ PMD T+K+K+ TG
Sbjct: 206 MLMKQCETLLSRLMLHQYAWVFNNPVDVEKLNIPDYFTVIKHPMDLGTVKSKIT----TG 261
Query: 90 -YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL---LPKVMEEEKR 145
Y + ADVRL F NAMKYN +DVH MA++L + FE +W + LP + E
Sbjct: 262 AYSSPLAFAADVRLTFSNAMKYNPPGNDVHFMAETLSKYFEVRWKAIEKKLPVTIGAEPV 321
Query: 146 QEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVD--MQLENLRETVIQKCRKMSTEEKK 203
+A + ++ T+ + AK + ++ ++D ++LE R+ MS EEK
Sbjct: 322 A----PRAGIHVE-TETKIDPTPAK--KKKIAQIDSMVKLEPFRQV-------MSNEEKL 367
Query: 204 NLGTALTRLSPEDLCKALEIVAENNPSFHATAQ----EVDLDMDAQSELTLWRLKVFVQE 259
L T L L E ++ + E++ H Q E+++D+D S+ TL+ L+ + +
Sbjct: 368 KLSTELEALLSELPETIIDFLKEHS---HNDDQNGEVEIEIDIDTLSDDTLFELRKLLDD 424
Query: 260 SL 261
L
Sbjct: 425 YL 426
>gi|431916886|gb|ELK16646.1| Bromodomain-containing protein 2 [Pteropus alecto]
Length = 833
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 399 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 455
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 456 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 484
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 110 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 166
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 167 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 207
>gi|296197845|ref|XP_002746465.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Callithrix
jacchus]
Length = 800
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|114326383|ref|NP_001041552.1| bromodomain-containing protein 2 [Canis lupus familiaris]
gi|62899715|sp|Q5TJG6.1|BRD2_CANFA RecName: Full=Bromodomain-containing protein 2
gi|55956582|emb|CAI11405.1| bromodomain-containing protein 2 [Canis lupus familiaris]
Length = 803
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|332026521|gb|EGI66642.1| Bromodomain-containing protein 2 [Acromyrmex echinatior]
Length = 1559
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 70/121 (57%), Gaps = 9/121 (7%)
Query: 15 GKKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMD 74
GK+ L K+ + L + F ++ +AWPF PVD E LGLHDY+++I+KPMD
Sbjct: 444 GKEKLSEALKSCNDILKELFAKK------HSPYAWPFYKPVDAELLGLHDYHDIIKKPMD 497
Query: 75 FSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
T+K KMD + Y+ E +DVRL+F N KYN DV MA+ L + FE ++ +
Sbjct: 498 LGTVKTKMDNRQ---YKTAHEFASDVRLIFTNCYKYNPPDHDVVSMARKLQDIFEMRYAK 554
Query: 135 L 135
+
Sbjct: 555 V 555
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H++AWPF PVD + L L DY+++I+KPMD TIK ++ + + Y
Sbjct: 109 LQFLQKGVLKPVWKHQFAWPFQQPVDAKKLSLPDYHKIIKKPMDLGTIKKRL---ENSYY 165
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ +E D +F N YN +DV VMA++L + F K Q+
Sbjct: 166 WSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQM 210
>gi|410958884|ref|XP_003986043.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Felis catus]
gi|410958886|ref|XP_003986044.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Felis catus]
Length = 804
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|403261524|ref|XP_003923168.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 800
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|348541135|ref|XP_003458042.1| PREDICTED: bromodomain-containing protein 2-like [Oreochromis
niloticus]
Length = 821
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I++PMD STIK KMDG++ YR + ADVRL+F N
Sbjct: 408 YAWPFYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMDGRE---YREAHQFSADVRLMFSN 464
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN DV MA+ L + FE
Sbjct: 465 CYKYNPPDHDVVAMARKLQDVFE 487
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H +AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 80 LQFLQKVLLKSLWRHHFAWPFHEPVDAVKLNLPDYHKIIKTPMDMGTIKKRL---ENNYY 136
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
R+ E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 137 RSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 181
>gi|198469092|ref|XP_002134216.1| GA26201 [Drosophila pseudoobscura pseudoobscura]
gi|198146712|gb|EDY72843.1| GA26201 [Drosophila pseudoobscura pseudoobscura]
Length = 1981
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E AD
Sbjct: 498 FSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAAD 554
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV M + L + FE ++ +
Sbjct: 555 VRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 590
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF ++ I +H +AWPF PVD + L L DY+++I++PMD TIK +++ Y
Sbjct: 39 LQFLIKTVMKMIWKHHFAWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY---Y 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 150
+ +E D +F N YN +DV VMA++L + F +K ++ +PK EE E
Sbjct: 96 WSAKETIHDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IETMPK---EELELEPAT 151
Query: 151 AKA 153
AK
Sbjct: 152 AKG 154
>gi|344298832|ref|XP_003421095.1| PREDICTED: bromodomain-containing protein 2 [Loxodonta africana]
Length = 798
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|351703550|gb|EHB06469.1| Bromodomain-containing protein 2 [Heterocephalus glaber]
Length = 798
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 367 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 423
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 424 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 452
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + T Y
Sbjct: 78 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENTYY 134
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 135 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
>gi|114052340|ref|NP_001039331.1| bromodomain-containing protein 2 [Bos taurus]
gi|108935958|sp|Q32S26.1|BRD2_BOVIN RecName: Full=Bromodomain-containing protein 2
gi|63169167|gb|AAY34703.1| bromodomain containing 2 [Bos taurus]
gi|296474561|tpg|DAA16676.1| TPA: bromodomain-containing protein 2 [Bos taurus]
Length = 803
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|426250128|ref|XP_004018790.1| PREDICTED: bromodomain-containing protein 2 [Ovis aries]
Length = 803
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|397474356|ref|XP_003808648.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 2
[Pan paniscus]
Length = 800
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|395832114|ref|XP_003789121.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Otolemur
garnettii]
Length = 791
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 359 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 415
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 416 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 444
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + + Y
Sbjct: 70 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENSYY 126
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 127 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 167
>gi|297661251|ref|XP_002809176.1| PREDICTED: bromodomain-containing protein 2 isoform 3 [Pongo
abelii]
Length = 754
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 321 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 377
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 378 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 406
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 32 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 89 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|114606772|ref|XP_001168005.1| PREDICTED: bromodomain-containing protein 2 isoform 10 [Pan
troglodytes]
gi|114606774|ref|XP_001168036.1| PREDICTED: bromodomain-containing protein 2 isoform 11 [Pan
troglodytes]
gi|410213772|gb|JAA04105.1| bromodomain containing 2 [Pan troglodytes]
gi|410213774|gb|JAA04106.1| bromodomain containing 2 [Pan troglodytes]
gi|410267650|gb|JAA21791.1| bromodomain containing 2 [Pan troglodytes]
gi|410267652|gb|JAA21792.1| bromodomain containing 2 [Pan troglodytes]
gi|410303978|gb|JAA30589.1| bromodomain containing 2 [Pan troglodytes]
gi|410303980|gb|JAA30590.1| bromodomain containing 2 [Pan troglodytes]
gi|410354717|gb|JAA43962.1| bromodomain containing 2 [Pan troglodytes]
gi|410354719|gb|JAA43963.1| bromodomain containing 2 [Pan troglodytes]
Length = 800
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|417404705|gb|JAA49093.1| Putative transcription initiation factor tfiid subunit bdf1
[Desmodus rotundus]
Length = 799
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|297661247|ref|XP_002809174.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Pongo
abelii]
gi|297661249|ref|XP_002809175.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Pongo
abelii]
Length = 801
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|195999880|ref|XP_002109808.1| hypothetical protein TRIADDRAFT_20501 [Trichoplax adhaerens]
gi|190587932|gb|EDV27974.1| hypothetical protein TRIADDRAFT_20501, partial [Trichoplax
adhaerens]
Length = 470
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 113/223 (50%), Gaps = 10/223 (4%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PV+ E LGL DYYE+I+ PMD T+K+K + + Y+ + E ADVRL+F N
Sbjct: 170 YAWPFYEPVNAEKLGLTDYYEIIKHPMDLGTVKDKFEKLE---YKAINEFAADVRLIFTN 226
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQT 166
KYN D+ MA+ L + FE K+ Q+ +E + +A + ++ +
Sbjct: 227 CYKYNPSDHDIVNMARRLQDVFEFKYAQI-----PDESTNTKGKASKKSSQGTSKPKPKQ 281
Query: 167 NKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAE 226
K+ R + + ++ V+ M+ +EK+ L + +L + L + + I+
Sbjct: 282 PVKKKQRKKTPPPKKRKKSYNSEVLD-VEPMTYDEKRQLSLDINKLPGDKLGRVVHIIQS 340
Query: 227 NNPSFH-ATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSS 268
P+ + +E+++D + TL L+ +VQ +LK R S
Sbjct: 341 REPALRESNPEEIEIDFETLKPSTLRELERYVQSTLKRQKRPS 383
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Query: 34 FVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 93
F++ + +H++AWPF PVD L L DY+++I+KPMD TIK K++GK Y +
Sbjct: 9 FLKTVIDGLWKHRYAWPFRQPVDPVKLQLPDYFKIIKKPMDLGTIKRKLEGK---MYHSA 65
Query: 94 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV 139
+E D+ F N YN DD+ +M + L + +++K Q+ +V
Sbjct: 66 KECMDDILRTFTNCYTYNKTSDDIVLMCEELEKVYKKKLAQMPAQV 111
>gi|109070687|ref|XP_001115845.1| PREDICTED: hypothetical protein LOC717893 isoform 7 [Macaca
mulatta]
gi|109070689|ref|XP_001115854.1| PREDICTED: hypothetical protein LOC717893 isoform 8 [Macaca
mulatta]
Length = 802
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|60360108|dbj|BAD90273.1| mKIAA4005 protein [Mus musculus]
Length = 818
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 387 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 443
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 444 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 472
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 98 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 154
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 155 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 195
>gi|301757117|ref|XP_002914388.1| PREDICTED: bromodomain-containing protein 2-like [Ailuropoda
melanoleuca]
Length = 803
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|440909604|gb|ELR59493.1| Bromodomain-containing protein 2 [Bos grunniens mutus]
Length = 810
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|47059183|ref|NP_997660.1| bromodomain-containing protein 2 [Rattus norvegicus]
gi|392355205|ref|XP_003751971.1| PREDICTED: bromodomain-containing protein 2-like [Rattus
norvegicus]
gi|81872356|sp|Q6MGA9.1|BRD2_RAT RecName: Full=Bromodomain-containing protein 2; AltName:
Full=Protein RING3
gi|46237556|emb|CAE83937.1| bromodomain-containing 2 [Rattus norvegicus]
gi|149043366|gb|EDL96817.1| bromodomain containing 2, isoform CRA_b [Rattus norvegicus]
Length = 798
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 367 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 423
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 424 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 452
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 78 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 134
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 135 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
>gi|380815348|gb|AFE79548.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|380815350|gb|AFE79549.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|383420527|gb|AFH33477.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|383420529|gb|AFH33478.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|384948624|gb|AFI37917.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|384948626|gb|AFI37918.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
Length = 802
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|178057339|ref|NP_001116557.1| bromodomain-containing protein 2 [Sus scrofa]
gi|147223324|emb|CAN13285.1| bromodomain containing 2 [Sus scrofa]
Length = 803
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|3273701|gb|AAC24810.1| female sterile homeotic-related protein Frg-1 [Mus musculus]
Length = 798
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 367 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 423
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 424 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 452
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 78 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 134
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 135 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
>gi|149034725|gb|EDL89462.1| bromodomain containing 4, isoform CRA_a [Rattus norvegicus]
Length = 915
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 366 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGAD 422
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 423 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK +++ Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNY---Y 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|4826806|ref|NP_005095.1| bromodomain-containing protein 2 isoform 1 [Homo sapiens]
gi|164419758|ref|NP_001106653.1| bromodomain-containing protein 2 isoform 1 [Homo sapiens]
gi|426352675|ref|XP_004043835.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Gorilla
gorilla gorilla]
gi|426352677|ref|XP_004043836.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Gorilla
gorilla gorilla]
gi|12230989|sp|P25440.2|BRD2_HUMAN RecName: Full=Bromodomain-containing protein 2; AltName:
Full=O27.1.1; AltName: Full=Really interesting new gene
3 protein
gi|577293|dbj|BAA07641.1| KIAA9001 [Homo sapiens]
gi|2980663|emb|CAA43996.1| FSH [Homo sapiens]
gi|52545950|emb|CAH56171.1| hypothetical protein [Homo sapiens]
gi|119624068|gb|EAX03663.1| bromodomain containing 2, isoform CRA_b [Homo sapiens]
gi|119624069|gb|EAX03664.1| bromodomain containing 2, isoform CRA_b [Homo sapiens]
gi|119624071|gb|EAX03666.1| bromodomain containing 2, isoform CRA_b [Homo sapiens]
gi|168277492|dbj|BAG10724.1| bromodomain-containing protein 2 [synthetic construct]
Length = 801
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|71067345|ref|NP_034368.2| bromodomain-containing protein 2 [Mus musculus]
gi|326368244|ref|NP_001191902.1| bromodomain-containing protein 2 [Mus musculus]
gi|81894326|sp|Q7JJ13.1|BRD2_MOUSE RecName: Full=Bromodomain-containing protein 2; AltName:
Full=Female sterile homeotic-related protein 1; AltName:
Full=Fsrg-1; AltName: Full=Protein RING3
gi|2995270|emb|CAA15819.1| MMRING3.1.2 [Mus musculus]
gi|3041763|dbj|BAA25416.1| Ring3 [Mus musculus]
gi|3811391|gb|AAC69907.1| RING3 [Mus musculus]
gi|74186521|dbj|BAE34749.1| unnamed protein product [Mus musculus]
gi|74214328|dbj|BAE40404.1| unnamed protein product [Mus musculus]
gi|123233747|emb|CAM17898.1| bromodomain containing 2 [Mus musculus]
gi|148678305|gb|EDL10252.1| bromodomain containing 2 [Mus musculus]
gi|187954015|gb|AAI38657.1| Bromodomain containing 2 [Mus musculus]
gi|223459952|gb|AAI38656.1| Bromodomain containing 2 [Mus musculus]
Length = 798
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 367 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 423
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 424 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 452
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 78 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 134
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 135 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
>gi|402866610|ref|XP_003897472.1| PREDICTED: bromodomain-containing protein 2 [Papio anubis]
Length = 804
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|166851651|gb|ABY91321.1| RING3 [Sus scrofa]
Length = 756
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 321 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 377
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 378 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 406
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 32 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 89 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|1370115|emb|CAA65450.1| kinase [Homo sapiens]
Length = 754
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 321 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 377
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 378 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 406
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 32 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 89 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|348576418|ref|XP_003473984.1| PREDICTED: bromodomain-containing protein 2 [Cavia porcellus]
Length = 802
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 367 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 423
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 424 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 452
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + T Y
Sbjct: 78 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENTYY 134
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 135 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
>gi|52545923|emb|CAH56179.1| hypothetical protein [Homo sapiens]
Length = 754
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 321 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 377
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 378 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 406
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 32 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 89 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|313747419|ref|NP_001186385.1| bromodomain-containing protein 2 isoform 3 [Homo sapiens]
gi|426352681|ref|XP_004043838.1| PREDICTED: bromodomain-containing protein 2 isoform 4 [Gorilla
gorilla gorilla]
gi|182769|gb|AAA68890.1| putative [Homo sapiens]
Length = 754
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 321 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 377
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 378 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 406
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 32 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 89 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|114606788|ref|XP_001167666.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Pan
troglodytes]
Length = 753
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 321 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 377
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 378 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 406
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 32 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 89 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|15706263|emb|CAC69989.1| bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|344239383|gb|EGV95486.1| Bromodomain-containing protein 4 [Cricetulus griseus]
Length = 723
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQH-KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 366 FTKKHASYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGAD 422
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L E FE ++ ++
Sbjct: 423 VRLMFSNCYKYNPPDHEVVAMARKLQEVFEMRFAKM 458
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|340729450|ref|XP_003403016.1| PREDICTED: homeotic protein female sterile-like, partial [Bombus
terrestris]
Length = 497
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y+ +E +D
Sbjct: 27 FSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNRE---YKTAQEFASD 83
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV MA+ L + FE ++ ++
Sbjct: 84 VRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKI 119
>gi|297290567|ref|XP_001115810.2| PREDICTED: hypothetical protein LOC717893 isoform 2 [Macaca
mulatta]
Length = 755
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 321 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 377
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 378 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 406
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 32 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 89 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|2995269|emb|CAA15818.1| MMRING3.1.1 [Mus musculus]
gi|62945214|dbj|BAD97682.1| bromodomain-containing Brd2 protein [Mus musculus]
Length = 752
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 321 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 377
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 378 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 406
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 32 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 89 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|291396003|ref|XP_002714557.1| PREDICTED: bromodomain containing 2 [Oryctolagus cuniculus]
Length = 802
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|354485151|ref|XP_003504747.1| PREDICTED: bromodomain-containing protein 4 [Cricetulus griseus]
Length = 721
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQH-KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 366 FTKKHASYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGAD 422
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L E FE ++ ++
Sbjct: 423 VRLMFSNCYKYNPPDHEVVAMARKLQEVFEMRFAKM 458
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|396080308|ref|NP_571275.2| bromodomain-containing protein 2 isoform 1 [Danio rerio]
gi|157280793|gb|ABV29329.1| bromodomain-containing protein 2a [Danio rerio]
Length = 836
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVDV LGLHDYY++I PMD STIK KMD ++ YR+ + ADVRL+F N
Sbjct: 402 YAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHRE---YRDALQFAADVRLMFSN 458
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 459 CYKYNPPDHDVVAMARRLQDVFEFRFAKM 487
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H +AWPF PVD L L DYY +I++PMD TIK ++ + Y
Sbjct: 77 LQFLQKALVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRL---ENNYY 133
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE 142
R+ E D +F N YN DD+ +MA+SL + F +K Q +P+V EE
Sbjct: 134 RSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQ-MPEVEEE 184
>gi|157280791|gb|ABV29328.1| bromodomain-containing protein 2a [Danio rerio]
Length = 838
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVDV LGLHDYY++I PMD STIK KMD ++ YR+ + ADVRL+F N
Sbjct: 404 YAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHRE---YRDALQFAADVRLMFSN 460
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 461 CYKYNPPDHDVVAMARRLQDVFEFRFAKM 489
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H +AWPF PVD L L DYY +I++PMD TIK ++ + Y
Sbjct: 77 LQFLQKALVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRL---ENNYY 133
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE 142
R+ E D +F N YN DD+ +MA+SL + F +K Q +P+V EE
Sbjct: 134 RSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQ-MPEVEEE 184
>gi|396080310|ref|NP_001257500.1| bromodomain-containing protein 2 isoform 2 [Danio rerio]
gi|94732369|emb|CAK04960.1| bromodomain-containing 2 [Danio rerio]
gi|190337777|gb|AAI63905.1| Bromodomain-containing 2a [Danio rerio]
gi|190339055|gb|AAI63902.1| Bromodomain-containing 2a [Danio rerio]
Length = 832
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVDV LGLHDYY++I PMD STIK KMD ++ YR+ + ADVRL+F N
Sbjct: 402 YAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHRE---YRDALQFAADVRLMFSN 458
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 459 CYKYNPPDHDVVAMARRLQDVFEFRFAKM 487
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H +AWPF PVD L L DYY +I++PMD TIK ++ + Y
Sbjct: 77 LQFLQKALVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRL---ENNYY 133
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE 142
R+ E D +F N YN DD+ +MA+SL + F +K Q +P+V EE
Sbjct: 134 RSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQ-MPEVEEE 184
>gi|393911119|gb|EJD76176.1| bromodomain containing protein [Loa loa]
Length = 1163
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 68/113 (60%), Gaps = 11/113 (9%)
Query: 32 QFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYR 91
+ F ++ +SF WPF+ PVDVEGL L DYY++++ PMD TI+ K+D K Y
Sbjct: 369 ELFTKKCKSFT------WPFLEPVDVEGLKLEDYYDIVKNPMDLGTIRRKLDAKQ---YA 419
Query: 92 NVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL--PKVMEE 142
E+ ADV LV +N KYN D +H ++L + FE+KW Q+ P V++E
Sbjct: 420 TPEELRADVILVCENCYKYNPTSDPIHQHGRALQKYFEDKWHQMPEEPAVVDE 472
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
L+F +++ +HK AWPFM PVD LGL DY++VI++PMD +TI+ ++ Y
Sbjct: 115 LEFMLKEVLKPAMRHKHAWPFMKPVDAVRLGLPDYHKVIKRPMDMNTIEKRL---RNCYY 171
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
+ ++ D +F N K+N DDV +M K++ + EK ++LLP
Sbjct: 172 YSAKDCMQDFESIFSNCYKFNQNEDDVSLMCKNVENLYREK-MKLLP 217
>gi|24640482|ref|NP_511078.2| female sterile (1) homeotic, isoform B [Drosophila melanogaster]
gi|68067442|sp|P13709.2|FSH_DROME RecName: Full=Homeotic protein female sterile; AltName:
Full=Fragile-chorion membrane protein
gi|22831925|gb|AAF46312.3| female sterile (1) homeotic, isoform B [Drosophila melanogaster]
Length = 2038
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E AD
Sbjct: 492 FSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAAD 548
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV M + L + FE ++ +
Sbjct: 549 VRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ I +H ++WPF PVD + L L DY+++I++PMD TIK +++ Y
Sbjct: 39 LQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY---Y 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
+ +E D +F N YN +DV VMA++L + F +K ++ +PK
Sbjct: 96 WSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IESMPK 142
>gi|195480258|ref|XP_002101200.1| GE17489 [Drosophila yakuba]
gi|194188724|gb|EDX02308.1| GE17489 [Drosophila yakuba]
Length = 2036
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E AD
Sbjct: 491 FSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAAD 547
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV M + L + FE ++ +
Sbjct: 548 VRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 583
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ I +H ++WPF PVD + L L DY+++I++PMD TIK +++ Y
Sbjct: 39 LQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY---Y 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
+ +E D +F N YN +DV VMA++L + F +K ++ +PK
Sbjct: 96 WSAKETIHDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IESMPK 142
>gi|313747417|ref|NP_001186384.1| bromodomain-containing protein 2 isoform 2 [Homo sapiens]
gi|39645317|gb|AAH63840.1| BRD2 protein [Homo sapiens]
Length = 836
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|442615454|ref|NP_001259321.1| female sterile (1) homeotic, isoform G [Drosophila melanogaster]
gi|440216522|gb|AGB95166.1| female sterile (1) homeotic, isoform G [Drosophila melanogaster]
Length = 2046
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E AD
Sbjct: 492 FSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAAD 548
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV M + L + FE ++ +
Sbjct: 549 VRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ I +H ++WPF PVD + L L DY+++I++PMD TIK +++ Y
Sbjct: 39 LQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY---Y 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
+ +E D +F N YN +DV VMA++L + F +K ++ +PK
Sbjct: 96 WSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IESMPK 142
>gi|157453|gb|AAA28540.1| 7.6 kb fsh membrane protein [Drosophila melanogaster]
Length = 2038
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E AD
Sbjct: 492 FSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAAD 548
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV M + L + FE ++ +
Sbjct: 549 VRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ I +H ++WPF PVD + L L DY+++I++PMD TIK +++ Y
Sbjct: 39 LQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY---Y 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
+ +E D +F N YN +DV VMA++L + F +K ++ +PK
Sbjct: 96 WSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IESMPK 142
>gi|395533918|ref|XP_003768996.1| PREDICTED: bromodomain-containing protein 2-like [Sarcophilus
harrisii]
Length = 800
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 369 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 425
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 426 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 454
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
E D +F N YN DD+ +MA++L + F +K + L+P
Sbjct: 136 WLASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK-VALMP 181
>gi|194897170|ref|XP_001978604.1| GG17589 [Drosophila erecta]
gi|190650253|gb|EDV47531.1| GG17589 [Drosophila erecta]
Length = 2024
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E AD
Sbjct: 489 FSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAAD 545
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV M + L + FE ++ +
Sbjct: 546 VRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 581
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ I +H ++WPF PVD + L L DY+++I++PMD TIK +++ Y
Sbjct: 39 LQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY---Y 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
+ +E D +F N YN +DV VMA++L + F +K ++ +PK
Sbjct: 96 WSAKETIHDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IESMPK 142
>gi|126309678|ref|XP_001369391.1| PREDICTED: bromodomain-containing protein 2-like [Monodelphis
domestica]
Length = 801
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 369 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 425
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 426 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 454
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
E D +F N YN DD+ +MA++L + F +K + L+P
Sbjct: 136 WLASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK-VALMP 181
>gi|24210305|emb|CAD54663.1| bromodomain containing 2 [Danio rerio]
Length = 806
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVDV LGLHDYY++I PMD STIK KMD ++ YR+ + ADVRL+F N
Sbjct: 393 YAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHRE---YRDALQFAADVRLMFSN 449
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 450 CYKYNPPDHDVVAMARRLQDVFEFRFAKM 478
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H +AWPF PVD L L DYY +I++PMD TIK ++ + Y
Sbjct: 66 LQFLQKALVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRL---ENNYY 122
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE 142
R+ E D +F N YN DD+ +MA+SL + F +K Q +P+V EE
Sbjct: 123 RSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQ-MPEVEEE 173
>gi|170582857|ref|XP_001896320.1| Bromodomain containing protein [Brugia malayi]
gi|158596511|gb|EDP34844.1| Bromodomain containing protein [Brugia malayi]
Length = 1009
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 68/114 (59%), Gaps = 11/114 (9%)
Query: 32 QFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYR 91
+ F ++ +SF WPF+ PVDVEGL L DYY++++ PMD TI+ K+D K Y
Sbjct: 227 ELFTKKCKSF------TWPFLEPVDVEGLKLEDYYDIVKNPMDLGTIRRKLDAKQ---YA 277
Query: 92 NVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL--PKVMEEE 143
E+ ADV L+ +N KYN D +H ++L + FE+KW Q+ P ++EE
Sbjct: 278 TPEELRADVILICENCYKYNPTSDPIHQHGRALQKYFEDKWRQMPEEPSAIDEE 331
>gi|432888948|ref|XP_004075102.1| PREDICTED: bromodomain-containing protein 3-like [Oryzias latipes]
Length = 460
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 107/236 (45%), Gaps = 54/236 (22%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E LGLHDY+++I+ PMD ST+K KMD D Y++ + ADVRL+F N
Sbjct: 248 YAWPFYKPVDAEALGLHDYHDIIKYPMDLSTVKKKMDAGD---YQDAEQFSADVRLIFSN 304
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQT 166
KYN + V MA+ L FE+K+
Sbjct: 305 CYKYNPPQHSVVGMARKLQGVFEQKF---------------------------------- 330
Query: 167 NKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAE 226
AK +L V QL NL + K KMS E+++ T +L + + I+
Sbjct: 331 --AKMPEEQLQTVHQQLSNLTQDPFNK-PKMSKEQEREPETQHKKLG-----RVVHILKT 382
Query: 227 NNPSFHAT-AQEVDLDMDAQSELTLWRLKVFVQESL--------KAASRSSGDMGG 273
PS ++ E+++D + TL L+ +V+ L K +S+S+ G
Sbjct: 383 QEPSMSSSNPDEIEIDFEVLKPSTLRELERYVRSCLHKRFKKYQKQSSQSASHPAG 438
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+H +AWPF PVD LGL DY+++I PMD TIK ++ + Y + E D +
Sbjct: 91 RHPFAWPFYQPVDAVALGLPDYHKIITSPMDMGTIKKRL---ENNYYWSASECMEDFNTM 147
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
F N YN DD+ +MA L + F K + L+P+
Sbjct: 148 FTNCYIYNKPTDDIVLMALPLEKIFLNK-VSLMPR 181
>gi|312085274|ref|XP_003144613.1| hypothetical protein LOAG_09036 [Loa loa]
Length = 1022
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 68/113 (60%), Gaps = 11/113 (9%)
Query: 32 QFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYR 91
+ F ++ +SF WPF+ PVDVEGL L DYY++++ PMD TI+ K+D K Y
Sbjct: 228 ELFTKKCKSFT------WPFLEPVDVEGLKLEDYYDIVKNPMDLGTIRRKLDAKQ---YA 278
Query: 92 NVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL--PKVMEE 142
E+ ADV LV +N KYN D +H ++L + FE+KW Q+ P V++E
Sbjct: 279 TPEELRADVILVCENCYKYNPTSDPIHQHGRALQKYFEDKWHQMPEEPAVVDE 331
>gi|195457098|ref|XP_002075425.1| GK15212 [Drosophila willistoni]
gi|194171510|gb|EDW86411.1| GK15212 [Drosophila willistoni]
Length = 2114
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E AD
Sbjct: 538 FSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAAD 594
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV M + L + FE ++ +
Sbjct: 595 VRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 630
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ I +H ++WPF PVD + L L DY+++I++PMD TIK +++ Y
Sbjct: 80 LQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY---Y 136
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
+ +E D +F N YN +DV VMA++L + F +K ++ +PK
Sbjct: 137 WSAKEAILDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IESMPK 183
>gi|444519083|gb|ELV12566.1| Bromodomain-containing protein 2 [Tupaia chinensis]
Length = 743
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 308 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 364
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 365 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 393
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 82 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 138
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 139 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 179
>gi|322801602|gb|EFZ22243.1| hypothetical protein SINV_03245 [Solenopsis invicta]
Length = 877
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 41 FITQH-KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+E+I+KPMD T+K KMD + Y+ E +D
Sbjct: 404 FAKKHSPYAWPFYKPVDAELLGLHDYHEIIKKPMDLGTVKTKMDNRQ---YKTAHEFASD 460
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV MA+ L + FE ++ ++
Sbjct: 461 VRLIFTNCYKYNPPDHDVVSMARKLQDIFEMRYAKV 496
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H++AWPF PVD + L L DY+++I+KPMD TIK ++ + + Y
Sbjct: 53 LQFLQKGVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKKPMDLGTIKKRL---ENSYY 109
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ +E D +F N YN +DV VMA++L + F K Q+
Sbjct: 110 WSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQM 154
>gi|67972378|dbj|BAE02531.1| unnamed protein product [Macaca fascicularis]
Length = 776
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 321 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 377
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 378 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 406
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 32 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 89 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|195355783|ref|XP_002044367.1| GM11218 [Drosophila sechellia]
gi|194130685|gb|EDW52728.1| GM11218 [Drosophila sechellia]
Length = 1272
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E AD
Sbjct: 494 FSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAAD 550
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV M + L + FE ++ +
Sbjct: 551 VRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 586
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ I +H ++WPF PVD + L L DY+++I++PMD TIK +++ Y
Sbjct: 39 LQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY---Y 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
+ +E D +F N YN +DV VMA++L + F +K ++ +PK
Sbjct: 96 WSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IESMPK 142
>gi|2780775|dbj|BAA24377.1| Ring3 [Mus musculus]
Length = 549
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 367 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 423
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 424 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 452
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 78 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 134
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 135 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
>gi|189241564|ref|XP_967957.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 1321
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E L LHDY+++I+KPMD T+K KMD ++ YR+ +E AD
Sbjct: 375 FSKKHSSYAWPFYKPVDAELLMLHDYHDIIKKPMDLGTVKQKMDNRE---YRSAQEFAAD 431
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV MA+ L + FE K+ ++
Sbjct: 432 VRLIFTNCYKYNPSDHDVVAMARKLQDVFEVKFAKI 467
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H++AWPF PVD + L L DY+++I++PMD TIK ++ D Y
Sbjct: 39 LQFLQKTVLKAVWKHQFAWPFRQPVDAKKLNLPDYHQIIQQPMDLGTIKKRL---DNNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKF 128
+ +E D +F N YN +DV VMA++L + F
Sbjct: 96 WSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQTLEKVF 133
>gi|432882591|ref|XP_004074106.1| PREDICTED: bromodomain-containing protein 3-like [Oryzias latipes]
Length = 823
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+E+I+ PMD STIK KMDG++ YR ++ ADVRL+F N
Sbjct: 410 YAWPFYKPVDAVSLGLHDYHEIIKFPMDLSTIKRKMDGRE---YREAQQFSADVRLMFSN 466
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN DV MA+ L + FE
Sbjct: 467 CYKYNPPDHDVVAMARKLQDVFE 489
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H +AWPF PVD L L DY+++I+ PMD TI+ ++ + Y
Sbjct: 78 LQFLQKVVLKSLWRHHFAWPFHEPVDAAKLNLPDYHKIIKTPMDMGTIRKRL---ENNYY 134
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
R+ E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 135 RSASECMQDFNAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 179
>gi|332253606|ref|XP_003275928.1| PREDICTED: bromodomain-containing protein 4 isoform 1 [Nomascus
leucogenys]
Length = 1364
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|403308909|ref|XP_003944882.1| PREDICTED: bromodomain-containing protein 4 [Saimiri boliviensis
boliviensis]
Length = 1334
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 389 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 445
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 446 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 481
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 87 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 143
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 144 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 184
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 630 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 689
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 690 ELERYVTSCLR 700
>gi|291413178|ref|XP_002722853.1| PREDICTED: bromodomain-containing protein 4 [Oryctolagus cuniculus]
Length = 1346
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|62122590|dbj|BAD93258.1| RING3 [Oryzias latipes]
Length = 814
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+E+I+ PMD STIK KMDG++ YR ++ ADVRL+F N
Sbjct: 401 YAWPFYKPVDAVSLGLHDYHEIIKFPMDLSTIKRKMDGRE---YREAQQFSADVRLMFSN 457
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN DV MA+ L + FE
Sbjct: 458 CYKYNPPDHDVVAMARKLQDVFE 480
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 15/190 (7%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H +AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 78 LQFLQKVVLKSLWRHHFAWPFHEPVDAAKLNLPDYHKIIKTPMDMGTIKKRL---ENNYY 134
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL------LPKVMEEEK 144
R+ E D +F N YN DD+ +MA+SL + F +K Q+ LP + K
Sbjct: 135 RSASECMQDFNAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPQEEIELPPPVPRSK 194
Query: 145 RQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKN 204
++K + + +++ D L +T++ KC ++ + ++
Sbjct: 195 -----QSKISGGVTTAHQVPAVSQSVYSPPTPETPDSILSTPPQTILTKCSSITLQPEQT 249
Query: 205 LGTALTRLSP 214
+ A+T P
Sbjct: 250 I-PAITGPPP 258
>gi|18157527|dbj|BAB83842.1| RING3 [Oryzias latipes]
Length = 814
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+E+I+ PMD STIK KMDG++ YR ++ ADVRL+F N
Sbjct: 401 YAWPFYKPVDAVSLGLHDYHEIIKFPMDLSTIKRKMDGRE---YREAQQFSADVRLMFSN 457
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN DV MA+ L + FE
Sbjct: 458 CYKYNPPDHDVVAMARKLQDVFE 480
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 15/190 (7%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H +AWPF PVD L L DY+++I+ PMD TI+ ++ + Y
Sbjct: 78 LQFLQKVVLKSLWRHHFAWPFHEPVDAAKLNLPDYHKIIKTPMDMGTIRKRL---ENNYY 134
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL------LPKVMEEEK 144
R+ E D +F N YN DD+ +MA+SL + F +K Q+ LP + K
Sbjct: 135 RSASECMQDFNAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPQEEIELPPPVPRSK 194
Query: 145 RQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKN 204
++K + + +++ D L +T++ KC ++ + ++
Sbjct: 195 -----QSKISGGVTTAHQVPAVSQSVYSPPTPETPDSILSTPPQTILTKCSSITLQPEQT 249
Query: 205 LGTALTRLSP 214
+ A+T P
Sbjct: 250 I-PAITGPPP 258
>gi|432094627|gb|ELK26133.1| Bromodomain-containing protein 2 [Myotis davidii]
Length = 881
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 452 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 508
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 509 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 537
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 163 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 219
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 220 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 260
>gi|297703913|ref|XP_002828869.1| PREDICTED: bromodomain-containing protein 4 isoform 2 [Pongo
abelii]
Length = 1363
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|55725298|emb|CAH89514.1| hypothetical protein [Pongo abelii]
Length = 546
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|397484965|ref|XP_003813634.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
[Pan paniscus]
Length = 1362
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|19718731|ref|NP_490597.1| bromodomain-containing protein 4 isoform long [Homo sapiens]
gi|20141192|sp|O60885.2|BRD4_HUMAN RecName: Full=Bromodomain-containing protein 4; AltName:
Full=Protein HUNK1
gi|16589003|gb|AAL26987.1|AF386649_1 bromodomain-containing 4 [Homo sapiens]
gi|119604879|gb|EAW84473.1| bromodomain containing 4, isoform CRA_d [Homo sapiens]
Length = 1362
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|426387578|ref|XP_004060242.1| PREDICTED: bromodomain-containing protein 4 [Gorilla gorilla
gorilla]
Length = 1362
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|28278510|gb|AAH45866.1| Brd2a protein [Danio rerio]
Length = 586
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVDV LGLHDYY++I PMD STIK KMD ++ YR+ + ADVRL+F N
Sbjct: 404 YAWPFYKPVDVSSLGLHDYYDIIMYPMDLSTIKRKMDHRE---YRDALQFAADVRLMFSN 460
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 461 CYKYNPPDHDVVAMARRLQDVFEFRFAKM 489
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H +AWPF PVD L L DYY +I++PMD TIK +++ Y
Sbjct: 77 LQFLQKALVRMLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENNY---Y 133
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE 142
R+ E D+ +F N YN DD+ +MA+SL + F +K Q +P+V EE
Sbjct: 134 RSASECMQDLNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQ-MPEVEEE 184
>gi|2780777|dbj|BAA24378.1| Ring3 [Mus musculus]
gi|2780779|dbj|BAA24379.1| Ring3 [Mus musculus]
Length = 503
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 321 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 377
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 378 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 406
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 32 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 89 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|133777453|gb|AAI14644.1| BRD2 protein [Bos taurus]
Length = 558
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|348552081|ref|XP_003461857.1| PREDICTED: bromodomain-containing protein 4-like [Cavia porcellus]
Length = 1373
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 605 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 664
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 665 ELERYVTSCLR 675
>gi|194223682|ref|XP_001914731.1| PREDICTED: bromodomain-containing protein 4 [Equus caballus]
Length = 1364
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 192 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTL 250
+KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 605 EKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTL 664
Query: 251 WRLKVFVQESLK 262
L+ +V L+
Sbjct: 665 RELERYVTSCLR 676
>gi|402904600|ref|XP_003915131.1| PREDICTED: bromodomain-containing protein 4 [Papio anubis]
Length = 1300
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|224473804|gb|ACN49148.1| bromodomain containing 2 [Oryzias dancena]
Length = 610
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+E+I++PMD STIK KMD ++ YR+ ++ ADVRL+F N
Sbjct: 410 YAWPFYKPVDAVSLGLHDYHEIIKQPMDLSTIKRKMDSRE---YRDAQQFSADVRLMFSN 466
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN DV MA+ L + FE
Sbjct: 467 CYKYNPPDHDVVAMARKLQDVFE 489
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 12/192 (6%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H +AWPF PVD L L DY+++I+ PMD TIK +++ Y
Sbjct: 78 LQFLQKVVLKSLWRHHFAWPFHEPVDAVKLSLPDYHKIIKTPMDMGTIKKRLENNY---Y 134
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ-------LLPKVMEEE 143
R+ E D +F N YN DD+ +MA+SL + F +K Q L P +
Sbjct: 135 RSASECMQDFNAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPQEEIELAPPAPRSK 194
Query: 144 KRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEV-DMQLENLRETVIQKCRKMSTEEK 202
+ + ++ + L T V E D L +T++ KC + + +
Sbjct: 195 QSKNLKKGRNILGGVTTAHQVPAVSQSVYSPPTPETPDSILSTPPQTILTKCSTPTLQPE 254
Query: 203 KNLGTALTRLSP 214
+ + A+T L P
Sbjct: 255 QTI-PAITGLPP 265
>gi|18308125|gb|AAL67833.1|AF461395_1 bromodomain-containing protein BRD4 long variant [Mus musculus]
Length = 1400
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 366 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGAD 422
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 423 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|224473811|gb|ACN49152.1| bromodomain containing 2 [Oryzias dancena]
Length = 826
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+E+I++PMD STIK KMD ++ YR+ ++ ADVRL+F N
Sbjct: 410 YAWPFYKPVDAVSLGLHDYHEIIKQPMDLSTIKRKMDSRE---YRDAQQFSADVRLMFSN 466
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN DV MA+ L + FE
Sbjct: 467 CYKYNPPDHDVVAMARKLQDVFE 489
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 12/192 (6%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H +AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 78 LQFLQKVVLKSLWRHHFAWPFHEPVDAVKLSLPDYHKIIKTPMDMGTIKKRL---ENNYY 134
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ-------LLPKVMEEE 143
R+ E D +F N YN DD+ +MA+SL + F +K Q L P +
Sbjct: 135 RSASECMQDFNAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPQDEIELAPPAPRSK 194
Query: 144 KRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEV-DMQLENLRETVIQKCRKMSTEEK 202
+ + ++ + L T V E D L +T++ KC + + +
Sbjct: 195 QSKNLKKGRNILGGVTTAHQVPAVSQSVYSPPTPETPDSILSTPPQTILTKCSTPTLQPE 254
Query: 203 KNLGTALTRLSP 214
+ + A+T L P
Sbjct: 255 QTI-PAITGLPP 265
>gi|162135989|ref|NP_001085290.1| uncharacterized protein LOC443648 [Xenopus laevis]
gi|115313740|gb|AAI23909.1| LOC443648 protein [Xenopus laevis]
gi|159507463|gb|ABW97744.1| bromodomain 4 [Xenopus laevis]
Length = 1351
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 64/96 (66%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H+ +AWPF PVDVE LGLHDY E+I+ PMD TIK KM+ +D Y+ +E +D
Sbjct: 383 FSKKHQAYAWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENRD---YKEAQEFASD 439
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V +MA+ L + FE ++ ++
Sbjct: 440 VRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKM 475
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVDV L L DY+++I+ PMD TIK +++ Y
Sbjct: 63 LQYLLKAVLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKTPMDMGTIKKRLENH---YY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 192 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTL 250
Q+CR MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 631 QRCRPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTL 690
Query: 251 WRLKVFVQESLKAASRS 267
L+ +V L+ +S
Sbjct: 691 RELERYVTSCLRKKRKS 707
>gi|242077236|ref|XP_002448554.1| hypothetical protein SORBIDRAFT_06g028960 [Sorghum bicolor]
gi|241939737|gb|EES12882.1| hypothetical protein SORBIDRAFT_06g028960 [Sorghum bicolor]
Length = 458
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 112/228 (49%), Gaps = 12/228 (5%)
Query: 49 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 108
W F PV+VE LGLHDY+ VI++PMD T+K +G Y + + ADVRL F NA+
Sbjct: 134 W-FNAPVEVERLGLHDYHTVIKRPMDLGTVK---EGLAAGRYASHDDFAADVRLTFTNAL 189
Query: 109 KYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNK 168
+YN +VH A +LL FE + + L EEE R E + + ++L
Sbjct: 190 RYNPVGHEVHTFAGALLAYFERMYKEALAN-FEEECRSLEPPPR-PVAVELPPPPAAEPV 247
Query: 169 AKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENN 228
+++ V M+ RE R+MS EEK L L L E + L+IV + N
Sbjct: 248 EAKVKPRAGNVRMRKPKAREP---NKREMSLEEKNMLRIGLESLPEEKMHNVLQIVRKRN 304
Query: 229 PSFHATAQEVDLDMDAQSELTLWRLKVFVQ---ESLKAASRSSGDMGG 273
+ E++LD+D T W L FV ++LK + R++ GG
Sbjct: 305 NNPEMLGDEIELDIDEMDVETQWELDRFVTNFNKALKKSQRAAMMNGG 352
>gi|213512228|ref|NP_001094373.1| bromodomain containing 4 [Rattus norvegicus]
Length = 1403
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 366 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGAD 422
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 423 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|74184776|dbj|BAE27987.1| unnamed protein product [Mus musculus]
Length = 1401
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 367 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGAD 423
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 424 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 459
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 608 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 667
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 668 ELERYVTSCLR 678
>gi|297466946|ref|XP_002704782.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
[Bos taurus]
Length = 1368
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|297476378|ref|XP_002688607.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
[Bos taurus]
gi|296486110|tpg|DAA28223.1| TPA: bromodomain containing 4 [Bos taurus]
Length = 1368
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|50400639|sp|Q9ESU6.1|BRD4_MOUSE RecName: Full=Bromodomain-containing protein 4; AltName:
Full=Mitotic chromosome-associated protein; Short=MCAP
gi|9931486|gb|AAG02191.1|AF273217_1 cell proliferation related protein CAP [Mus musculus]
Length = 1400
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 366 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGAD 422
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 423 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|395847805|ref|XP_003796555.1| PREDICTED: bromodomain-containing protein 4 [Otolemur garnettii]
Length = 1366
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|325652134|ref|NP_001191701.1| bromodomain-containing protein 4 [Sus scrofa]
gi|321172828|gb|ADW77216.1| bromodomain-containing protein 4 [Sus scrofa]
Length = 1368
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KCR MS +EK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|226342873|ref|NP_065254.3| bromodomain-containing protein 4 isoform 1 [Mus musculus]
gi|148708379|gb|EDL40326.1| bromodomain containing 4, isoform CRA_a [Mus musculus]
gi|148708382|gb|EDL40329.1| bromodomain containing 4, isoform CRA_a [Mus musculus]
Length = 1400
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 366 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGAD 422
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 423 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|12802525|gb|AAK07919.1|AF318183_1 ring 3 [Mus musculus]
Length = 503
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 367 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 423
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 424 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 452
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 78 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 134
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 135 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
>gi|123233748|emb|CAM17899.1| bromodomain containing 2 [Mus musculus]
Length = 473
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 367 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 423
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 424 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 452
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 78 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 134
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 135 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
>gi|281343180|gb|EFB18764.1| hypothetical protein PANDA_018131 [Ailuropoda melanoleuca]
Length = 1230
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|74190894|dbj|BAE28228.1| unnamed protein product [Mus musculus]
Length = 473
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 367 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 423
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 424 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 452
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 78 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 134
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 135 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLKKIFLQK 175
>gi|432109400|gb|ELK33657.1| Bromodomain-containing protein 4 [Myotis davidii]
Length = 1183
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 362 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 418
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 419 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 454
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 603 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 662
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 663 ELERYVTSCLR 673
>gi|426230380|ref|XP_004009251.1| PREDICTED: bromodomain-containing protein 4 [Ovis aries]
Length = 1225
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 363 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 419
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 420 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 455
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 604 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 663
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 664 ELERYVTSCLR 674
>gi|71897271|ref|NP_001025845.1| bromodomain-containing protein 2 [Gallus gallus]
gi|1370092|emb|CAA65449.1| kinase [Gallus gallus]
Length = 729
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+E+I+ PMD STIK KM+ +D Y + +E ADVRL+F N
Sbjct: 315 YAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRD---YHDAQEFAADVRLMFSN 371
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE + ++
Sbjct: 372 CYKYNPPDHDVVAMARKLQDVFEFSYAKM 400
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 32 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
E D +F N YN DD+ +MA++L + F +K Q+ P+ E
Sbjct: 89 WGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQE 139
>gi|345787686|ref|XP_541985.3| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
isoform 1 [Canis lupus familiaris]
Length = 1360
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|301785596|ref|XP_002928216.1| PREDICTED: bromodomain-containing protein 4-like [Ailuropoda
melanoleuca]
Length = 1260
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|84579095|dbj|BAE72981.1| hypothetical protein [Macaca fascicularis]
Length = 617
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 261 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 317
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 318 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 353
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 501 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 560
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 561 ELERYVTSCLR 571
>gi|395513633|ref|XP_003761027.1| PREDICTED: bromodomain-containing protein 4 [Sarcophilus harrisii]
Length = 1379
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 386 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLETRE---YRDAQEFAAD 442
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 443 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 478
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
N E D +F N YN DD+ +MA++L + F +K +L P+ E
Sbjct: 120 WNAHECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISELPPEETE 170
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 627 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 686
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 687 ELERYVTSCLR 697
>gi|327290160|ref|XP_003229792.1| PREDICTED: bromodomain-containing protein 2-like [Anolis
carolinensis]
Length = 794
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+E+I+ PMD STIK KM+ +D YR+ +E +DVRL+F N
Sbjct: 374 YAWPFYKPVDASALGLHDYHEIIKYPMDLSTIKRKMENRD---YRDAQEFASDVRLMFSN 430
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE + ++
Sbjct: 431 CYKYNPPDHDVVAMARKLQDVFEFSYAKM 459
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 76 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 132
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 133 WSSAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQM 177
>gi|312373441|gb|EFR21184.1| hypothetical protein AND_17422 [Anopheles darlingi]
Length = 1442
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E AD
Sbjct: 37 FSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAAD 93
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFE 129
VRL+F N KYN DV M + L + FE
Sbjct: 94 VRLIFTNCYKYNPPDHDVVAMGRKLQDVFE 123
>gi|195130189|ref|XP_002009535.1| GI15407 [Drosophila mojavensis]
gi|193907985|gb|EDW06852.1| GI15407 [Drosophila mojavensis]
Length = 2056
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E AD
Sbjct: 519 FSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAAD 575
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV M + L + FE ++ +
Sbjct: 576 VRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 611
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ I +H ++WPF PVD + L L DY+++I++PMD TIK +++ Y
Sbjct: 39 LQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY---Y 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
+ +E D +F N YN +DV VMA++L + F +K ++ +PK
Sbjct: 96 WSAKEAIHDFNTMFTNCYVYNKPGEDVVVMAQTLEKVFLQK-IESMPK 142
>gi|328703281|ref|XP_001944541.2| PREDICTED: hypothetical protein LOC100164694 [Acyrthosiphon pisum]
Length = 1162
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 62/98 (63%), Gaps = 4/98 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD LGLHDY+++I+KPMD T+K K+D ++ Y+N ++ AD
Sbjct: 354 FTKKHAAYAWPFYKPVDAAWLGLHDYHDIIKKPMDLGTVKTKLDNRE---YKNSKDFAAD 410
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
V L+F N KYN + DV MAK L FE K ++ P
Sbjct: 411 VNLIFSNCYKYNPKDHDVVAMAKKLQAVFEAKMSKVPP 448
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
L F + + +H+ AWPF PVD L L DY++VI+ PMD T+K ++ + Y
Sbjct: 73 LNFLQKTVMKALWKHQHAWPFYQPVDASKLNLPDYHKVIKTPMDLGTVKKRL---ENNYY 129
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
E D+ +F N YN +DV +MA++L + F K Q++
Sbjct: 130 WCADECIQDINAMFSNCYTYNKPGEDVVLMAQTLEKIFLAKMGQMV 175
>gi|7512236|pir||T28145 RING3 kinase - chicken
gi|3129967|emb|CAA18965.1| RING3 kinase [synthetic construct]
gi|197304363|dbj|BAG69309.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304393|dbj|BAG69337.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304423|dbj|BAG69365.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304438|dbj|BAG69379.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304497|dbj|BAG69434.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+E+I+ PMD STIK KM+ +D Y + +E ADVRL+F N
Sbjct: 319 YAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRD---YHDAQEFAADVRLMFSN 375
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE + ++
Sbjct: 376 CYKYNPPDHDVVAMARKLQDVFEFSYAKM 404
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 32 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
E D +F N YN DD+ +MA++L + F +K Q+ P+ E
Sbjct: 89 WGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQE 139
>gi|169730373|gb|ACA64774.1| bromodomain-containing protein 2 [Meleagris gallopavo]
Length = 779
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+E+I+ PMD STIK KM+ +D Y + +E ADVRL+F N
Sbjct: 365 YAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRD---YHDAQEFAADVRLMFSN 421
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE + ++
Sbjct: 422 CYKYNPPDHDVVAMARKLQDVFEFSYAKM 450
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 78 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 134
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
E D +F N YN DD+ +MA++L + F +K Q+ P+ E
Sbjct: 135 WGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQE 185
>gi|383417065|gb|AFH31746.1| bromodomain-containing protein 4 isoform short [Macaca mulatta]
gi|387541550|gb|AFJ71402.1| bromodomain-containing protein 4 isoform short [Macaca mulatta]
Length = 721
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 605 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 664
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 665 ELERYVTSCLR 675
>gi|344283171|ref|XP_003413346.1| PREDICTED: bromodomain-containing protein 4-like [Loxodonta
africana]
Length = 965
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLKVVLKTLWRHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
+C+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 RCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|384254936|gb|AFH75302.1| BRD2 [Lyrurus tetrix]
Length = 779
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+E+I+ PMD STIK KM+ +D Y + +E ADVRL+F N
Sbjct: 365 YAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRD---YHDAQEFAADVRLMFSN 421
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE + ++
Sbjct: 422 CYKYNPPDHDVVAMARKLQDVFEFSYAKM 450
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 78 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 134
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
E D +F N YN DD+ +MA++L + F +K Q+ P+ E
Sbjct: 135 WGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQE 185
>gi|351711490|gb|EHB14409.1| Bromodomain-containing protein 4 [Heterocephalus glaber]
Length = 1225
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 376 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGAD 432
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 433 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 468
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 97 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 153
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 154 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 194
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 616 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 675
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 676 ELERYVTSCLR 686
>gi|197304453|dbj|BAG69393.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+E+I+ PMD STIK KM+ +D Y + +E ADVRL+F N
Sbjct: 319 YAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRD---YHDAQEFAADVRLMFSN 375
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE + ++
Sbjct: 376 CYKYNPPDHDVVAMARKLQDVFEFSYAKM 404
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 32 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
E D +F N YN DD+ +MA++L + F +K Q+ P+ E
Sbjct: 89 WGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQE 139
>gi|213983065|ref|NP_001135690.1| bromodomain containing 4 [Xenopus (Silurana) tropicalis]
gi|197245689|gb|AAI68637.1| Unknown (protein for MGC:186343) [Xenopus (Silurana) tropicalis]
Length = 1364
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 64/96 (66%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H+ +AWPF PVDV+ LGLHDY E+I+ PMD TIK KMD D Y++ +E +D
Sbjct: 390 FSKKHQAYAWPFYKPVDVDALGLHDYREIIKHPMDLGTIKVKMDNWD---YKDAKEFASD 446
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V +MA+ L + FE ++ ++
Sbjct: 447 VRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRYAKM 482
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVDV L L DY+++I+ PMD TIK +++ Y
Sbjct: 65 LQYLLKTVLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKNPMDMGTIKKRLENH---YY 121
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 150
N +E D +F N YN DD+ +MA++L E+ +LQ + E QEE E
Sbjct: 122 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL----EKLFLQKI-----SEMPQEETE 172
Query: 151 AKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVI 191
VQ+ R E +E D + +R V+
Sbjct: 173 LA----------VVQSKGRGRGRKEQSEQDTSITPMRTRVL 203
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 192 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTL 250
Q+CR MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 638 QRCRPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTL 697
Query: 251 WRLKVFV----------QESLKAASRSSGDMGG 273
L+ +V Q+ ++A + +G + G
Sbjct: 698 RELERYVTSCLRKKRKPQDKIEAPTSGTGKVKG 730
>gi|148356975|dbj|BAF62999.1| Bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304348|dbj|BAG69295.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304378|dbj|BAG69323.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304408|dbj|BAG69351.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304468|dbj|BAG69407.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304482|dbj|BAG69420.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304512|dbj|BAG69448.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304526|dbj|BAG69461.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|261863985|gb|ACY01481.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|261863995|gb|ACY01490.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+E+I+ PMD STIK KM+ +D Y + +E ADVRL+F N
Sbjct: 319 YAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRD---YHDAQEFAADVRLMFSN 375
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE + ++
Sbjct: 376 CYKYNPPDHDVVAMARKLQDVFEFSYAKM 404
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 32 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
E D +F N YN DD+ +MA++L + F +K Q+ P+ E
Sbjct: 89 WGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQE 139
>gi|33417197|gb|AAH55508.1| Brd2b protein [Danio rerio]
gi|159155579|gb|AAI54432.1| Brd2b protein [Danio rerio]
Length = 558
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 64/97 (65%), Gaps = 3/97 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD STIK KMD ++ YR ++ ADVRL+F N
Sbjct: 358 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTIKRKMDERE---YREAQQFSADVRLMFSN 414
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
KYN DV MA+ L + FE ++ ++ +V +EE
Sbjct: 415 CYKYNPPDHDVVSMARKLQDVFEFRFAKMPDEVSDEE 451
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H +AWPF PVD L L DY+++I++PMD TIK ++ + Y
Sbjct: 53 LQFLHKVLVKALWRHHFAWPFHEPVDATRLNLPDYHKIIKQPMDMGTIKKRL---ENNYY 109
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
R E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 110 RGASECLQDFNTMFTNCYIYNKPTDDIVLMAQSLEKVFLQKVAQM 154
>gi|197304540|dbj|BAG69474.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+E+I+ PMD STIK KM+ +D Y + +E ADVRL+F N
Sbjct: 319 YAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRD---YHDAQEFAADVRLMFSN 375
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE + ++
Sbjct: 376 CYKYNPPDHDVVAMARKLQDVFEFSYAKM 404
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I+ PMD TIK ++ + Y
Sbjct: 32 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKLPMDMGTIKRRL---ENNYY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
E D +F N YN DD+ +MA++L + F +K Q+ P+ E
Sbjct: 89 WGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQE 139
>gi|332887140|dbj|BAJ53019.2| Bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+E+I+ PMD STIK KM+ +D Y + +E ADVRL+F N
Sbjct: 319 YAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRD---YHDAQEFAADVRLMFSN 375
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE + ++
Sbjct: 376 CYKYNPPDHDVVAMARKLQDVFEFSYAKM 404
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 32 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
E D +F N YN DD+ +MA++L + F +K Q+ P+ E
Sbjct: 89 WGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQE 139
>gi|15219397|ref|NP_177458.1| bromodomain-containing protein GTE3 [Arabidopsis thaliana]
gi|75194105|sp|Q9S7T1.1|GTE3_ARATH RecName: Full=Transcription factor GTE3, chloroplastic; AltName:
Full=Bromodomain-containing protein GTE3; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E3;
Flags: Precursor
gi|5903104|gb|AAD55662.1|AC008017_35 Highly similar to non intermediate filament IFA binding protein
[Arabidopsis thaliana]
gi|12324313|gb|AAG52122.1|AC010556_4 hypothetical protein; 61711-63380 [Arabidopsis thaliana]
gi|56236042|gb|AAV84477.1| At1g73150 [Arabidopsis thaliana]
gi|332197298|gb|AEE35419.1| bromodomain-containing protein GTE3 [Arabidopsis thaliana]
Length = 461
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 127/278 (45%), Gaps = 35/278 (12%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVDV LGLHDY+ +I++PMD T+K ++ + Y++ E DVR
Sbjct: 130 LMKHKSGWIFNTPVDVVTLGLHDYHNIIKEPMDLGTVKTRLSK---SLYKSPLEFAEDVR 186
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ--- 158
L F NAM YN DV+ MA+ LL FEEKW+ P + E +++ +D
Sbjct: 187 LTFNNAMLYNPVGHDVYHMAEILLNLFEEKWV---PLETQYELLIRKQQPVRDIDFHAPV 243
Query: 159 ----------------------LTQEAVQTNKAKELRSELNEV-DMQLENLRETVIQKC- 194
+ V+ + S N V L + E ++++
Sbjct: 244 STNTHNVEALPLPAPTPSLSPPPPPKVVENRTLERAESMTNPVKPAVLPVVPEKLVEEAS 303
Query: 195 --RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWR 252
R ++ +EK+ L L L + L ++I+ + P E++LD+D+ TLW
Sbjct: 304 ANRDLTFDEKRQLSEDLQDLPYDKLEAVVQIIKKRTPELSQQDDEIELDIDSLDLETLWE 363
Query: 253 LKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSN 290
L FV E ++ S+ + G ++ + + +N SN
Sbjct: 364 LFRFVTEYKESLSKKKEEQGLDSERDAESFHNSVHESN 401
>gi|347968593|ref|XP_003436250.1| AGAP002807-PB [Anopheles gambiae str. PEST]
gi|333467932|gb|EGK96763.1| AGAP002807-PB [Anopheles gambiae str. PEST]
Length = 1778
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E AD
Sbjct: 419 FSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAAD 475
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFE 129
VRL+F N KYN DV M + L + FE
Sbjct: 476 VRLIFTNCYKYNPPDHDVVAMGRKLQDVFE 505
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 4/122 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
L F +R + +H+++WPF PVD + L L DY+++I++PMD TIK +++ Y
Sbjct: 37 LHFLLRTVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNY---Y 93
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 150
+E D +F N YN +DV VMA++L + F K + L+PK E + Q+ +
Sbjct: 94 WTSKECIQDFNTMFTNCYVYNKPGEDVVVMAQTLEKLFLTK-VSLMPKDETEMEVQQPKG 152
Query: 151 AK 152
K
Sbjct: 153 GK 154
>gi|34392374|dbj|BAC82511.1| Serine threonine Kinase [Coturnix japonica]
Length = 735
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+E+I+ PMD STIK KM+ +D Y + +E ADVRL+F N
Sbjct: 319 YAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRD---YHDAQEFAADVRLMFSN 375
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE + ++
Sbjct: 376 CYKYNPPDHDVVAMARKLQDVFEFSYAKM 404
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 32 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
E D +F N YN DD+ +MA++L + F +K Q+ P+ E
Sbjct: 89 WGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQE 139
>gi|357627183|gb|EHJ76955.1| putative bromodomain containing 3 [Danaus plexippus]
Length = 1323
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K+ MD + Y+ E AD
Sbjct: 393 FSKKHSGYAWPFYKPVDAELLGLHDYFDIIKKPMDLGTVKHNMDHR---AYKTAAEFAAD 449
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV MA+ L + FE ++ ++
Sbjct: 450 VRLIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKI 485
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +HK+AWPF PVD + L L DY+++I+KPMD TIK ++ + Y
Sbjct: 64 LQFLQKNVIKAVWKHKFAWPFHQPVDAKKLNLPDYHKIIKKPMDLGTIKKRL---ESNYY 120
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ +E D +F N YN +DV VMA++L + F + Q+
Sbjct: 121 YSAQECIQDFNTMFTNCYVYNKPGEDVVVMAQTLEKLFLNRIAQM 165
>gi|3184498|gb|AAC27978.1| R31546_1 [Homo sapiens]
Length = 731
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 376 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 432
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 433 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 468
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 74 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 130
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 171
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 617 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 676
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 677 ELERYVTSCLR 687
>gi|332253608|ref|XP_003275929.1| PREDICTED: bromodomain-containing protein 4 isoform 2 [Nomascus
leucogenys]
Length = 722
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|7657218|ref|NP_055114.1| bromodomain-containing protein 4 isoform short [Homo sapiens]
gi|3115204|emb|CAA72780.1| HUNKI [Homo sapiens]
gi|119604875|gb|EAW84469.1| bromodomain containing 4, isoform CRA_a [Homo sapiens]
gi|410224242|gb|JAA09340.1| bromodomain containing 4 [Pan troglodytes]
gi|410259614|gb|JAA17773.1| bromodomain containing 4 [Pan troglodytes]
gi|410299992|gb|JAA28596.1| bromodomain containing 4 [Pan troglodytes]
Length = 722
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|395146456|gb|AFN53616.1| BRD2 [Chrysolophus pictus]
Length = 733
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+E+I+ PMD STIK KM+ +D Y + +E ADVRL+F N
Sbjct: 319 YAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRD---YHDAQEFAADVRLMFSN 375
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE + ++
Sbjct: 376 CYKYNPPDHDVVAMARKLQDVFEFSYAKM 404
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 32 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
E D +F N YN DD+ +MA++L + F +K Q+ P+ E
Sbjct: 89 WGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQE 139
>gi|270001347|gb|EEZ97794.1| hypothetical protein TcasGA2_TC030708 [Tribolium castaneum]
Length = 815
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E L LHDY+++I+KPMD T+K KMD ++ YR+ +E AD
Sbjct: 368 FSKKHSSYAWPFYKPVDAELLMLHDYHDIIKKPMDLGTVKQKMDNRE---YRSAQEFAAD 424
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV MA+ L + FE K+ ++
Sbjct: 425 VRLIFTNCYKYNPSDHDVVAMARKLQDVFEVKFAKI 460
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H++AWPF PVD + L L DY+++I++PMD TIK ++ D Y
Sbjct: 39 LQFLQKTVLKAVWKHQFAWPFRQPVDAKKLNLPDYHQIIQQPMDLGTIKKRL---DNNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKF 128
+ +E D +F N YN +DV VMA++L + F
Sbjct: 96 WSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQTLEKVF 133
>gi|149034726|gb|EDL89463.1| bromodomain containing 4, isoform CRA_b [Rattus norvegicus]
Length = 723
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 366 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGAD 422
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 423 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|24640484|ref|NP_727228.1| female sterile (1) homeotic, isoform A [Drosophila melanogaster]
gi|45554398|ref|NP_996368.1| female sterile (1) homeotic, isoform E [Drosophila melanogaster]
gi|45554406|ref|NP_996369.1| female sterile (1) homeotic, isoform D [Drosophila melanogaster]
gi|45554416|ref|NP_996370.1| female sterile (1) homeotic, isoform C [Drosophila melanogaster]
gi|281360582|ref|NP_001162699.1| female sterile (1) homeotic, isoform F [Drosophila melanogaster]
gi|157455|gb|AAA28541.1| 5.9 kb fsh membrane protein [Drosophila melanogaster]
gi|22831926|gb|AAN09226.1| female sterile (1) homeotic, isoform A [Drosophila melanogaster]
gi|45446848|gb|AAS65277.1| female sterile (1) homeotic, isoform C [Drosophila melanogaster]
gi|45446849|gb|AAS65278.1| female sterile (1) homeotic, isoform D [Drosophila melanogaster]
gi|45446850|gb|AAS65279.1| female sterile (1) homeotic, isoform E [Drosophila melanogaster]
gi|51092171|gb|AAT94499.1| LD26482p [Drosophila melanogaster]
gi|220945958|gb|ACL85522.1| fs(1)h-PA [synthetic construct]
gi|272506027|gb|ACZ95234.1| female sterile (1) homeotic, isoform F [Drosophila melanogaster]
Length = 1110
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E AD
Sbjct: 492 FSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAAD 548
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV M + L + FE ++ +
Sbjct: 549 VRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ I +H ++WPF PVD + L L DY+++I++PMD TIK +++ Y
Sbjct: 39 LQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY---Y 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
+ +E D +F N YN +DV VMA++L + F +K ++ +PK
Sbjct: 96 WSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IESMPK 142
>gi|226246640|ref|NP_932762.2| bromodomain-containing protein 4 isoform 2 [Mus musculus]
gi|148708380|gb|EDL40327.1| bromodomain containing 4, isoform CRA_b [Mus musculus]
gi|187951219|gb|AAI38836.1| Bromodomain containing 4 [Mus musculus]
gi|187952057|gb|AAI38835.1| Bromodomain containing 4 [Mus musculus]
Length = 723
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 366 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGAD 422
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 423 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|442615458|ref|NP_001259323.1| female sterile (1) homeotic, isoform I [Drosophila melanogaster]
gi|440216524|gb|AGB95168.1| female sterile (1) homeotic, isoform I [Drosophila melanogaster]
Length = 1115
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E AD
Sbjct: 497 FSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAAD 553
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV M + L + FE ++ +
Sbjct: 554 VRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 589
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ I +H ++WPF PVD + L L DY+++I++PMD TIK +++ Y
Sbjct: 39 LQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY---Y 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
+ +E D +F N YN +DV VMA++L + F +K ++ +PK
Sbjct: 96 WSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IESMPK 142
>gi|18308127|gb|AAL67834.1|AF461396_1 bromodomain-containing protein BRD4 short variant [Mus musculus]
Length = 723
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 366 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGAD 422
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 423 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|15238195|ref|NP_196617.1| global transcription factor group E2 [Arabidopsis thaliana]
gi|7671448|emb|CAB89388.1| bromodomain protein-like [Arabidopsis thaliana]
gi|332004179|gb|AED91562.1| global transcription factor group E2 [Arabidopsis thaliana]
Length = 678
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 64/88 (72%), Gaps = 3/88 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HKW+W F++PVDV GLGLHDY+ +++KPMD T+ KM+ + G YR+ + +DVR
Sbjct: 260 LMKHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTV--KMNLEKGL-YRSPIDFASDVR 316
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFE 129
L F NAM YN + DV++MA+ LL +F+
Sbjct: 317 LTFTNAMSYNPKGQDVYLMAEKLLSQFD 344
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
R+M+ +EK LG L L PE L + ++I+ + E++LD++A TLW L
Sbjct: 472 REMTMDEKGKLGVNLQELPPEKLGQLIQILRKRTRDLPQDGDEIELDIEALDNETLWELD 531
Query: 255 VFVQESLKAASR 266
FV K AS+
Sbjct: 532 RFVTNYRKMASK 543
>gi|363747028|ref|XP_003643891.1| PREDICTED: bromodomain-containing protein 4-like [Gallus gallus]
Length = 1354
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 380 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENRE---YRDAQEFAAD 436
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 437 VRLMFSNCYKYNPADHEVVAMARKLQDVFEMRFAKM 472
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 81 LQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 137
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
N +E D +F N YN DD+ +MA++L E+ +LQ + ++ +EE
Sbjct: 138 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL----EKLFLQKISEMTQEE 186
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 192 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTL 250
+KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 621 EKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTL 680
Query: 251 WRLKVFVQESLK 262
L+ +V L+
Sbjct: 681 RELERYVTSCLR 692
>gi|443611854|gb|AGC96178.1| bromodomain-containing protein 2 [Tympanuchus cupido]
Length = 779
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+E+I+ PMD STIK KM+ +D Y + +E ADVRL+F N
Sbjct: 365 YAWPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRD---YHDAQEFAADVRLMFSN 421
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE + ++
Sbjct: 422 CYKYNPPDHDVVAMARKLQDVFEFSYAKM 450
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 78 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 134
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
E D +F N YN DD+ +MA++L + F +K Q+ P+ E
Sbjct: 135 WGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQE 185
>gi|442615456|ref|NP_001259322.1| female sterile (1) homeotic, isoform H [Drosophila melanogaster]
gi|440216523|gb|AGB95167.1| female sterile (1) homeotic, isoform H [Drosophila melanogaster]
Length = 1105
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E AD
Sbjct: 487 FSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAAD 543
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV M + L + FE ++ +
Sbjct: 544 VRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 579
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ I +H ++WPF PVD + L L DY+++I++PMD TIK +++ Y
Sbjct: 39 LQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY---Y 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
+ +E D +F N YN +DV VMA++L + F +K ++ +PK
Sbjct: 96 WSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IESMPK 142
>gi|148708381|gb|EDL40328.1| bromodomain containing 4, isoform CRA_c [Mus musculus]
Length = 734
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 377 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGAD 433
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 434 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 469
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 74 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 130
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 171
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 618 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 677
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 678 ELERYVTSCLR 688
>gi|71052031|gb|AAH35266.1| BRD4 protein [Homo sapiens]
gi|119604876|gb|EAW84470.1| bromodomain containing 4, isoform CRA_b [Homo sapiens]
gi|119604877|gb|EAW84471.1| bromodomain containing 4, isoform CRA_b [Homo sapiens]
Length = 794
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|162287117|ref|NP_001104751.1| bromodomain-containing protein 4 [Danio rerio]
gi|159507457|gb|ABW97742.1| bromodomain 4 [Danio rerio]
Length = 1444
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 64/96 (66%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDV+ LGLHDY+++I+ PMD STIK+K++ + YR +E AD
Sbjct: 375 FAKKHAAYAWPFYKPVDVDTLGLHDYHDIIKHPMDLSTIKDKLETRQ---YREAQEFAAD 431
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 432 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 467
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 48 LQYLLKVVLKSLWKHQFAWPFHAPVDAVKLNLPDYYKIIKNPMDMGTIKKRL---ESAFY 104
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKF 128
+ +E D +F N YN DD+ +MA++L + F
Sbjct: 105 TSAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKVF 142
>gi|198282051|ref|NP_001128282.1| bromodomain containing 2 [Xenopus (Silurana) tropicalis]
gi|197245764|gb|AAI68574.1| brd2 protein [Xenopus (Silurana) tropicalis]
Length = 758
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVDV LGLHDYY++I+ PMD STIK KMD ++ +++ +E A VRL+F N
Sbjct: 342 YAWPFYKPVDVSALGLHDYYDIIKHPMDLSTIKKKMDNRE---FKDAQEFAAAVRLMFSN 398
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 399 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 427
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 27 SASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 86
S + LQ+ + + +H+++WPF PVD LGL DY+++I++PMD TIK ++ +
Sbjct: 55 STNQLQYLHKVVMKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKKRL---E 111
Query: 87 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
Y + E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 112 NNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKMFLQKVAQM 160
>gi|195565677|ref|XP_002106425.1| GD16134 [Drosophila simulans]
gi|194203801|gb|EDX17377.1| GD16134 [Drosophila simulans]
Length = 1038
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 3 LALRSSSKMHFIGKKLLEGGCKNLSASLLQFFVRQARS-----FITQHK-WAWPFMHPVD 56
+A R S IGKK C L ++ F +H +AWPF PVD
Sbjct: 425 IATRRESNRQVIGKKRRGWCCGGQDQEKLSDALKSCNEILKELFSKKHSGYAWPFYKPVD 484
Query: 57 VEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDD 116
E LGLHDY+++I+KPMD T+K KMD ++ Y++ E ADVRL+F N KYN D
Sbjct: 485 AEMLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAADVRLIFTNCYKYNPPDHD 541
Query: 117 VHVMAKSLLEKFEEKWLQL 135
V M + L + FE ++ +
Sbjct: 542 VVAMGRKLQDVFEMRYANI 560
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ I +H ++WPF PVD + L L DY+++I++PMD TIK +++ Y
Sbjct: 39 LQYLIQTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY---Y 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
+ +E D +F N YN +DV VMA++L + F +K ++ +PK
Sbjct: 96 WSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IESMPK 142
>gi|410950660|ref|XP_003982021.1| PREDICTED: bromodomain-containing protein 4 [Felis catus]
Length = 720
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|380792783|gb|AFE68267.1| bromodomain-containing protein 4 isoform short, partial [Macaca
mulatta]
Length = 553
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|52350614|gb|AAH82782.1| Brd4 protein, partial [Mus musculus]
Length = 582
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 366 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGAD 422
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 423 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|327488240|sp|Q9LXA7.2|GTE2_ARATH RecName: Full=Transcription factor GTE2; AltName:
Full=Bromodomain-containing protein GTE2; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E2
Length = 581
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 8 SSKMHFIGKKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYE 67
S K H + E K++ + Q V+ + +HKW+W F++PVDV GLGLHDY+
Sbjct: 156 SLKRHVALDLMSEKVLKSMMTTCGQILVK-----LMKHKWSWVFLNPVDVVGLGLHDYHR 210
Query: 68 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 127
+++KPMD T+ KM+ + G YR+ + +DVRL F NAM YN + DV++MA+ LL +
Sbjct: 211 IVDKPMDLGTV--KMNLEKGL-YRSPIDFASDVRLTFTNAMSYNPKGQDVYLMAEKLLSQ 267
Query: 128 FE 129
F+
Sbjct: 268 FD 269
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
R+M+ +EK LG L L PE L + ++I+ + E++LD++A TLW L
Sbjct: 397 REMTMDEKGKLGVNLQELPPEKLGQLIQILRKRTRDLPQDGDEIELDIEALDNETLWELD 456
Query: 255 VFVQESLKAASR 266
FV K AS+
Sbjct: 457 RFVTNYRKMASK 468
>gi|45501005|gb|AAH67129.1| BRD4 protein, partial [Homo sapiens]
gi|116283901|gb|AAH47888.1| BRD4 protein [Homo sapiens]
Length = 548
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|71681018|gb|AAI00642.1| Brd4 protein, partial [Rattus norvegicus]
Length = 566
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 366 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGAD 422
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 423 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|60649450|gb|AAH91649.1| BRD4 protein, partial [Homo sapiens]
Length = 550
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|116283228|gb|AAH00156.1| BRD4 protein [Homo sapiens]
gi|116283846|gb|AAH38988.1| BRD4 protein [Homo sapiens]
Length = 549
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|110736040|dbj|BAE99992.1| hypothetical protein [Arabidopsis thaliana]
Length = 461
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 127/278 (45%), Gaps = 35/278 (12%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVDV LGLHDY+ +I++PMD T+K ++ + Y++ E DVR
Sbjct: 130 LMKHKSGWIFNTPVDVVTLGLHDYHNIIKEPMDLETVKTRLSK---SLYKSPLEFAEDVR 186
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ--- 158
L F NAM YN DV+ MA+ LL FEEKW+ P + E +++ +D
Sbjct: 187 LTFNNAMLYNPVGHDVYHMAEILLNLFEEKWV---PLETQYELLIRKQQPVRDIDFHAPV 243
Query: 159 ----------------------LTQEAVQTNKAKELRSELNEV-DMQLENLRETVIQKC- 194
+ V+ + S N V L + E ++++
Sbjct: 244 STNTHNVEALPLPAPTPSLSPPPPPKVVENRTLERAESMTNPVKPAVLPVVPEKLVEEAS 303
Query: 195 --RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWR 252
R ++ +EK+ L L L + L ++I+ + P E++LD+D+ TLW
Sbjct: 304 ANRDLTFDEKRQLSEDLQDLPYDKLEAVVQIIKKRTPELSQQDDEIELDIDSLDLETLWE 363
Query: 253 LKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSN 290
L FV E ++ S+ + G ++ + + +N SN
Sbjct: 364 LFRFVTEYKESLSKKKEEQGLDSERDAESFHNSVHESN 401
>gi|33879612|gb|AAH30158.1| BRD4 protein, partial [Homo sapiens]
Length = 548
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|74354344|gb|AAI03774.1| Brd4 protein, partial [Mus musculus]
Length = 557
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 366 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGAD 422
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 423 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|74181884|dbj|BAE32643.1| unnamed protein product [Mus musculus]
Length = 545
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 366 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGAD 422
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 423 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|330414421|gb|AEC13624.1| bromodomain containing protein 2 [Ginglymostoma cirratum]
gi|339895692|dbj|BAK52515.1| bromodomain containing 2 [Ginglymostoma cirratum]
Length = 783
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 64/95 (67%), Gaps = 3/95 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD + LGLHDY+++I+ PMD STIK KMD ++ Y++ +E ADVRL+F N
Sbjct: 375 YAWPFYKPVDAKALGLHDYHDIIKHPMDLSTIKRKMDERE---YQDAQEFAADVRLMFSN 431
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
KYN DV MA+ L + FE ++ ++ + ME
Sbjct: 432 CYKYNPPDHDVVAMARKLQDVFEFRFAKMPDEPME 466
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+H++AWPF PVD L L DY+++I++PMD TIK ++ + Y + E D +
Sbjct: 102 KHQFAWPFYQPVDAVKLSLPDYHKIIKQPMDMGTIKKRL---ENNYYWSASECMQDFNTM 158
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
F N YN DD+ +MA++L + F +K Q+
Sbjct: 159 FTNCYIYNKPTDDIVLMAQTLEKLFLQKVAQM 190
>gi|432868098|ref|XP_004071410.1| PREDICTED: uncharacterized protein LOC101158947 [Oryzias latipes]
Length = 1443
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 61/89 (68%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVDV+ LGLHDY+++I+ PMD STIK K++ + YR+ +E ADVRL+F N
Sbjct: 375 YAWPFYKPVDVDALGLHDYHDIIKHPMDLSTIKAKLENRQ---YRDPQEFAADVRLMFSN 431
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 432 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 460
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H ++WPF PVD L L DYY +I PMD TIK ++ + + Y
Sbjct: 42 LQYLLKVVVKALWKHHFSWPFQAPVDAIKLNLPDYYTIIHTPMDLGTIKKRL---ENSYY 98
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 99 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKVFLQK 139
>gi|321456065|gb|EFX67182.1| hypothetical protein DAPPUDRAFT_302185 [Daphnia pulex]
Length = 754
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD LGLHDY+++I+KPMD T+K KMDG++ YR+ E +D
Sbjct: 364 FSKKHSGYAWPFYKPVDAGLLGLHDYHDIIKKPMDLGTVKAKMDGRE---YRSAAEFASD 420
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VR++F N KYN DV MA+ L + FE ++ ++
Sbjct: 421 VRMIFTNCYKYNPPDHDVVAMARKLQDVFEMRYAKI 456
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 64/115 (55%), Gaps = 7/115 (6%)
Query: 21 GGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKN 80
G C N +Q FV +A + +H +AWPF PVD + LGL DY+++I+ PMD T+K
Sbjct: 75 GRCTN-QLQYIQKFVMKA---VWKHSFAWPFHQPVDAKKLGLPDYFKIIKYPMDLGTVKK 130
Query: 81 KMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
++ + Y + +E D +F N YN +DV +MA++L + F K Q+
Sbjct: 131 RL---ENNYYWSAKECIQDFNTMFTNCYVYNKPGEDVVLMAQTLEKLFLTKVAQM 182
>gi|115530796|emb|CAL49346.1| bromodomain containing 2 [Xenopus (Silurana) tropicalis]
Length = 529
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVDV LGLHDYY++I+ PMD STIK KMD ++ +++ +E A VRL+F N
Sbjct: 362 YAWPFYKPVDVSALGLHDYYDIIKHPMDLSTIKKKMDNRE---FKDAQEFAAAVRLMFSN 418
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 419 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 447
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 27 SASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 86
S + LQ+ + + +H+++WPF PVD LGL DY+++I++PMD TIK ++ +
Sbjct: 75 STNQLQYLHKVVMKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKKRL---E 131
Query: 87 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
Y + E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 132 NNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKMFLQKVAQM 180
>gi|355673426|gb|AER95168.1| bromodomain containing 4 [Mustela putorius furo]
Length = 551
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 375 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 431
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 432 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 467
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 73 LQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 129
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 130 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 170
>gi|345326866|ref|XP_001506320.2| PREDICTED: bromodomain-containing protein 4 [Ornithorhynchus
anatinus]
Length = 719
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 363 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENRE---YRDAQEFAAD 419
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 420 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 455
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVD L L DYY++I+ PMD TI+ ++ + Y
Sbjct: 63 LQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIRKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
N E D +F N YN DD+ +MA++L + F +K +L
Sbjct: 120 WNAHECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEL 164
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 605 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 664
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 665 ELERYVTSCLR 675
>gi|413941779|gb|AFW74428.1| hypothetical protein ZEAMMB73_413666 [Zea mays]
Length = 757
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
I H WA PF+ PVD+ L + DY++++++PMD TI+ K+ K G Y RE ADVR
Sbjct: 180 IMSHVWAGPFLVPVDIVKLNIPDYFQIVKQPMDLGTIQKKL--KAGM-YSTPREFAADVR 236
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
L F NAM YN +DVH+MAK+L + FE +W
Sbjct: 237 LTFSNAMNYNPVNNDVHLMAKTLSKNFETRW 267
>gi|170587322|ref|XP_001898426.1| Bromodomain containing protein [Brugia malayi]
gi|158594150|gb|EDP32738.1| Bromodomain containing protein [Brugia malayi]
Length = 960
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 9/104 (8%)
Query: 32 QFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYR 91
+ F ++ +SF WPF+ PVDVEGL L DYY++++ PMD TI+ K+D K Y
Sbjct: 411 ELFTKKCKSF------TWPFLEPVDVEGLKLEDYYDIVKNPMDLGTIRRKLDAKQ---YA 461
Query: 92 NVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E+ ADV LV +N KYN D +H ++L + FE+KW Q+
Sbjct: 462 TPEELRADVILVCENCYKYNPTSDPIHQHGRALQKYFEDKWRQM 505
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 65/151 (43%), Gaps = 40/151 (26%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM------DG 84
L+F +++ +HK AWPFM PVD LGL DY++VI++PMD +TI+ ++
Sbjct: 115 LEFMLKEVLKPAMRHKHAWPFMKPVDAVRLGLPDYHKVIKRPMDMNTIEKRLRNCYYYSA 174
Query: 85 KDG-------------------TGYRNVREIYA---------------DVRLVFKNAMKY 110
KD T IYA DV +F N Y
Sbjct: 175 KDCMQVSRPLFFELETECIWTFTERATSTGIYASDCVMTYFEFFNSSDDVMTMFNNCYTY 234
Query: 111 NDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
N V++MAK+L + K + P+ +E
Sbjct: 235 NPPEYGVYMMAKNLEQYILSKLAAMPPEEVE 265
>gi|355673420|gb|AER95166.1| bromodomain containing 2 [Mustela putorius furo]
Length = 613
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+ KM+ +D YR+ +E ADVRL+F N
Sbjct: 376 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVXRKMENRD---YRDAQEFAADVRLMFSN 432
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 433 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 461
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 87 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 143
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 144 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 184
>gi|356508786|ref|XP_003523135.1| PREDICTED: transcription factor GTE10-like [Glycine max]
Length = 781
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 18/216 (8%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H++ W F PVDV L + DY+ VI+ PMD T+K ++ + Y N + ADVR
Sbjct: 218 LMSHQFGWVFNTPVDVVKLNIPDYFTVIKHPMDLGTVKKRITSGE---YSNPMDFAADVR 274
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L F+NAM YN +DVH+MA++L + FE +W + K+ + E ++ +++
Sbjct: 275 LTFENAMFYNPAGNDVHIMAETLSKFFETRWKAIEKKIPAIDSVASEPSRPTHVETEISD 334
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLS---PEDLC 218
T K K N+ +++ E ++ R M+ EEK+ L L + P+ +
Sbjct: 335 RVPPTKKKK---ITPNDTNVKPEPVK-------RIMTVEEKQKLSLELETMIGELPDSIS 384
Query: 219 KALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
L + N + E+++D+DA S+ TL++L+
Sbjct: 385 DFLREQSYNEGQIN--DDEIEIDIDALSDDTLFKLR 418
>gi|351697075|gb|EHA99993.1| Bromodomain testis-specific protein [Heterocephalus glaber]
Length = 832
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 244 YAWPFHSPVDVNALGLHNYYDIVKNPMDLGTIKKKMDNQE---YKDAYEFAADVRLMFMN 300
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN D+ MAK+L + FE
Sbjct: 301 CYKYNSPDHDIVAMAKTLQDVFE 323
>gi|255084403|ref|XP_002508776.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226524053|gb|ACO70034.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 852
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 91/173 (52%), Gaps = 7/173 (4%)
Query: 22 GCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 81
G + + L R+ S + +HK+AW F PVD L + DY+++I+ PMDF TIK K
Sbjct: 244 GIRAIRHKALMKECRECLSSVRKHKYAWAFNKPVDPIALHIPDYFDIIKNPMDFGTIKEK 303
Query: 82 MDGKD--GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ--LLP 137
+D K Y +E D+RLVF N YN D +M +L ++FE+ WL +
Sbjct: 304 LDKKSQQNGAYSGPQEFADDMRLVFDNCALYNTPDSDAGLMGSTLQQEFEKAWLAQNVDA 363
Query: 138 KVMEEEK-RQEEEEAKAQLDMQLTQEAV--QTNKAKELRSELNEVDMQLENLR 187
K+ EEE R +E+ A + +E V ++ + E+ +L EV QLE L+
Sbjct: 364 KIAEEEAVRAQEDAVIASTSDEPVEEEVLAESQQVSEVNRQLAEVQRQLEELK 416
>gi|66912019|gb|AAH97528.1| LOC443648 protein, partial [Xenopus laevis]
Length = 572
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 70/116 (60%), Gaps = 13/116 (11%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H+ +AWPF PVDVE LGLHDY E+I+ PMD TIK KM+ +D Y+ +E +D
Sbjct: 383 FSKKHQAYAWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENRD---YKEAQEFASD 439
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQL 155
VRL+F N KYN +V +MA+ L + FE ++ ++ E EEA A +
Sbjct: 440 VRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKM---------PDEPEEAPAPV 486
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVDV L L DY+++I+ PMD TIK +++ Y
Sbjct: 63 LQYLLKAVLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKTPMDMGTIKKRLENH---YY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|49118460|gb|AAH73443.1| LOC443648 protein, partial [Xenopus laevis]
Length = 559
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 70/116 (60%), Gaps = 13/116 (11%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H+ +AWPF PVDVE LGLHDY E+I+ PMD TIK KM+ +D Y+ +E +D
Sbjct: 383 FSKKHQAYAWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENRD---YKEAQEFASD 439
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQL 155
VRL+F N KYN +V +MA+ L + FE ++ ++ E EEA A +
Sbjct: 440 VRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKM---------PDEPEEAPAPV 486
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVDV L L DY+++I+ PMD TIK +++ Y
Sbjct: 63 LQYLLKAVLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKTPMDMGTIKKRLENH---YY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|326936210|ref|XP_003214150.1| PREDICTED: bromodomain-containing protein 4-like, partial
[Meleagris gallopavo]
Length = 697
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 288 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENRE---YRDAQEFAAD 344
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 345 VRLMFSNCYKYNPADHEVVAMARKLQDVFEMRFAKM 380
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
N +E D +F N YN DD+ +MA++L E+ +LQ + ++ +EE
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL----EKLFLQKISEMTQEE 168
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 192 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTL 250
+KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 529 EKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTL 588
Query: 251 WRLKVFVQESLK 262
L+ +V L+
Sbjct: 589 RELERYVTSCLR 600
>gi|413921384|gb|AFW61316.1| hypothetical protein ZEAMMB73_074233 [Zea mays]
Length = 558
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 122/271 (45%), Gaps = 56/271 (20%)
Query: 23 CKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM 82
C NL SL+ H WA PF+ PVD+ L + DY++++++PMD TI+ +M
Sbjct: 176 CANLLKSLMS------------HVWASPFLVPVDIVKLNIPDYFQIVKQPMDLGTIQKRM 223
Query: 83 DGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL---LPKV 139
K G Y E ADVRL F NAM YN +DVH+MAK+L + FE +W + LPK
Sbjct: 224 --KAGM-YSTPPEFAADVRLTFSNAMNYNPANNDVHLMAKTLSKNFESRWKLIEKKLPKP 280
Query: 140 MEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLEN-------------- 185
+E+ Q +E+ ++ ++ + N K + E ++ + +
Sbjct: 281 -DEKPPQPDEKPPQPVEKPPVRKPTKKNSTKRVSIEKEDLTKKKPSKKSVPKQYIFRGED 339
Query: 186 -----------------------LRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALE 222
+ + V + R M++E+K +L L +E
Sbjct: 340 SADSPVLQPKKRKTSPLVQDAPLVGDIVPTRKRIMTSEQKYDLSARLQSYGAFIPDHVVE 399
Query: 223 IVAENNPSFHATAQEVDLDMDAQSELTLWRL 253
++ + A +E++LDMDA + TL+ L
Sbjct: 400 LIRSHADYCDANEEELELDMDALGDDTLFEL 430
>gi|427785339|gb|JAA58121.1| Putative bromodomain-containing protein 4 [Rhipicephalus
pulchellus]
Length = 1295
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E LGLHDY+E+I+ PMD T+K KMD ++ Y++ E DVRL+F N
Sbjct: 400 YAWPFYKPVDAELLGLHDYHEIIKHPMDLGTVKQKMDNRE---YKSPEEFAGDVRLIFTN 456
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 457 CYKYNPPDHEVVAMARKLQDVFEMRYAKM 485
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ ++ + +H++AWPF PVD L L DY+ +I PMD TIK ++ + Y
Sbjct: 63 LQHLLKVVMKAMWKHQFAWPFQQPVDTVKLNLPDYHRIIRHPMDLGTIKKRL---EHCYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ +E D + +F N YN +DV +MA++L + F K ++
Sbjct: 120 SSAQECIEDFKTMFTNCYVYNKPGEDVVLMAQALEKLFLTKITEM 164
>gi|349805091|gb|AEQ18018.1| hypothetical protein [Hymenochirus curtipes]
Length = 497
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 64/96 (66%), Gaps = 4/96 (4%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVDVE LGLHDY E+I+ PMD TIK KM+ ++ Y+ +E ADVRL+F N
Sbjct: 114 YAWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENRE---YKEPQEFAADVRLMFSN 170
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE 142
KYN +V +MA+ L + FE ++ + +P +EE
Sbjct: 171 CYKYNPPDHEVVIMARKLQDVFEMRFAK-MPDELEE 205
>gi|159507460|gb|ABW97743.1| bromodomain 4 [Xenopus laevis]
Length = 1366
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 64/96 (66%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H+ +AWPF PVDVE LGLHDY E+I+ PMD TIK KM+ D Y+N ++ +D
Sbjct: 382 FSKKHQAYAWPFYKPVDVETLGLHDYCEIIKHPMDLGTIKVKMENCD---YKNAQDFASD 438
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V +MA+ L + FE ++ ++
Sbjct: 439 VRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKM 474
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVDV L L DYY++I+ PMD TIK +++ Y
Sbjct: 62 LQYLLKTVLKTLWKHQFAWPFQVPVDVVKLNLPDYYKIIKTPMDMGTIKKRLENH---FY 118
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
N +E D +F N YN DD+ +MA++L E+ +LQ + ++ +EE
Sbjct: 119 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL----EKLFLQKISEMPQEE 167
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 192 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTL 250
Q+CR MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 630 QRCRPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTL 689
Query: 251 WRLKVFVQESLK 262
L+ +V L+
Sbjct: 690 RELERYVTSCLR 701
>gi|413921385|gb|AFW61317.1| hypothetical protein ZEAMMB73_074233 [Zea mays]
Length = 770
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 122/271 (45%), Gaps = 56/271 (20%)
Query: 23 CKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM 82
C NL SL+ H WA PF+ PVD+ L + DY++++++PMD TI+ +M
Sbjct: 176 CANLLKSLMS------------HVWASPFLVPVDIVKLNIPDYFQIVKQPMDLGTIQKRM 223
Query: 83 DGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL---LPKV 139
K G Y E ADVRL F NAM YN +DVH+MAK+L + FE +W + LPK
Sbjct: 224 --KAGM-YSTPPEFAADVRLTFSNAMNYNPANNDVHLMAKTLSKNFESRWKLIEKKLPKP 280
Query: 140 MEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLEN-------------- 185
+E+ Q +E+ ++ ++ + N K + E ++ + +
Sbjct: 281 -DEKPPQPDEKPPQPVEKPPVRKPTKKNSTKRVSIEKEDLTKKKPSKKSVPKQYIFRGED 339
Query: 186 -----------------------LRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALE 222
+ + V + R M++E+K +L L +E
Sbjct: 340 SADSPVLQPKKRKTSPLVQDAPLVGDIVPTRKRIMTSEQKYDLSARLQSYGAFIPDHVVE 399
Query: 223 IVAENNPSFHATAQEVDLDMDAQSELTLWRL 253
++ + A +E++LDMDA + TL+ L
Sbjct: 400 LIRSHADYCDANEEELELDMDALGDDTLFEL 430
>gi|148232443|ref|NP_001086546.1| bromodomain containing 4 [Xenopus laevis]
gi|49899749|gb|AAH76786.1| Brd4-prov protein [Xenopus laevis]
Length = 1362
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 64/96 (66%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H+ +AWPF PVDVE LGLHDY E+I+ PMD TIK KM+ D Y+N ++ +D
Sbjct: 382 FSKKHQAYAWPFYKPVDVETLGLHDYCEIIKHPMDLGTIKVKMENCD---YKNAQDFASD 438
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V +MA+ L + FE ++ ++
Sbjct: 439 VRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKM 474
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVDV L L DYY++I+ PMD TIK +++ Y
Sbjct: 62 LQYLLKTVLKTLWKHQFAWPFQVPVDVVKLNLPDYYKIIKTPMDMGTIKKRLENH---FY 118
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 119 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 159
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 192 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTL 250
Q+CR MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 630 QRCRPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTL 689
Query: 251 WRLKVFVQESLK 262
L+ +V L+
Sbjct: 690 RELERYVTSCLR 701
>gi|334321601|ref|XP_001377106.2| PREDICTED: bromodomain testis-specific protein [Monodelphis
domestica]
Length = 1066
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
Query: 41 FITQH-KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDV LGLH+YY+V++ PMD TIK KMD ++ Y++ E AD
Sbjct: 285 FAKKHLAYAWPFYKPVDVTALGLHNYYDVVKSPMDLGTIKKKMDNQE---YKDAHEFAAD 341
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA++L + FE ++ ++
Sbjct: 342 VRLMFMNCYKYNPPDHEVVTMARTLQDVFEMQFAKI 377
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+KPMD STIK +++ K Y
Sbjct: 31 LQYLQKVVLKALWRHSFSWPFQQPVDAAKLKLPDYYSIIKKPMDLSTIKKRLEHK---YY 87
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D++ +F N YN DD+ +MA++L + F +K Q+
Sbjct: 88 VKSSECVEDLKTMFTNCYLYNKPGDDIVLMAQALEKLFMQKMSQM 132
>gi|47209011|emb|CAF91369.1| unnamed protein product [Tetraodon nigroviridis]
Length = 530
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 113/252 (44%), Gaps = 40/252 (15%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMDG + Y + ADVRL+F N
Sbjct: 279 YAWPFYEPVDAEALQLHDYHDIIKYPMDLSTVKRKMDGGE---YPDADSFAADVRLIFSN 335
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL---------LPKVMEEEKRQEEEEAKAQLDM 157
+YN + +V AK L FE+ + ++ P + + +E A ++
Sbjct: 336 CYRYNPAQLEVVAQAKKLQGVFEKSFAKIPDEPANPGQAPAAASGKSDRTDERAAPLAEV 395
Query: 158 QLTQEAVQTNKAKELRSELNEV------------DMQLENLRETVI-------------- 191
Q A Q A + + ++EV ++ +N
Sbjct: 396 QEQAGADQDKAAPDRLAAVSEVPPNKRKKKDDQNNIDRQNRGSPTFDSGNLWKKLKSWDP 455
Query: 192 -QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPS-FHATAQEVDLDMDAQSELT 249
KC ++ EEK L + RL + L ++I+ PS A E+++D + T
Sbjct: 456 EAKCLPLTYEEKHQLSLDINRLPGKKLGCVVQIIQTLEPSTCEANPDEIEIDFEVLKPST 515
Query: 250 LWRLKVFVQESL 261
L +L+ +V+ L
Sbjct: 516 LRQLQQYVKHCL 527
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 7/124 (5%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + +H +AWPF PVD LGL DY+++I PMD TIK ++ + Y
Sbjct: 33 LQFMQNVVVKSLWRHHYAWPFYEPVDAVALGLSDYHKIITSPMDLGTIKKRL---ENNYY 89
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 150
E D +F N YN DD+ +MA +L E+ +LQ + ++ +EE +
Sbjct: 90 WTASECLQDFNTMFTNCYIYNKPTDDIVLMALTL----EKIFLQKVGQMPQEEVEVHPQA 145
Query: 151 AKAQ 154
AK +
Sbjct: 146 AKGK 149
>gi|170036200|ref|XP_001845953.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878751|gb|EDS42134.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 848
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E AD
Sbjct: 421 FSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSANEFAAD 477
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFE 129
VRL+F N KYN DV M + L + FE
Sbjct: 478 VRLIFTNCYKYNPPDHDVVAMGRKLQDVFE 507
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
L F ++ + +H+++WPF PVD + L L DY+++I++PMD T+K ++ + Y
Sbjct: 61 LHFLLKTVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTVKKRL---ENNYY 117
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
+E D ++F N YN +DV VMA++L + F K + L+PK
Sbjct: 118 WTSKEAIQDFNIMFSNCYVYNKPGEDVVVMAQTLEKLFLTK-VSLMPK 164
>gi|112292667|gb|ABI14812.1| chloroplast bromodomain-containing protein [Pachysandra terminalis]
Length = 428
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 129/308 (41%), Gaps = 47/308 (15%)
Query: 27 SASLLQFFVRQARSFIT---QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 83
+ +L ++Q +T +HK W F PVDV G+GLHDY ++I+ PMD T+K +
Sbjct: 29 TGKMLSSMMKQCGQILTKLMRHKHGWIFNVPVDVVGMGLHDYNQIIKHPMDLGTVKLNI- 87
Query: 84 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEE------------- 130
GK+ Y + + +DVRL F NA+ YN + DV+ MA+ LL +FEE
Sbjct: 88 GKN--LYSSPLDFASDVRLTFNNALSYNPKGHDVYAMAEQLLVRFEEMFEPAYKKFEDAQ 145
Query: 131 ------------KWLQLLPKVMEEEKRQEEEEAKAQL------DMQLTQEAVQT-NKAKE 171
W +P R + A M L+ Q +A
Sbjct: 146 QRKISAGEIRRSSWSHQIPMPESIPNRDPLSSSAATRPGGFAHPMPLSTPQPQAFPQALA 205
Query: 172 LRSELNEVDMQLENLRETVIQKCR---------KMSTEEKKNLGTALTRLSPEDLCKALE 222
S +R +++ + +MS EEK LG +L L E + + ++
Sbjct: 206 STSAPAPAPKPFMAMRSATVKQPKPKAKDPNKREMSFEEKHKLGLSLQSLPQEKMEQVVQ 265
Query: 223 IVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDN 282
I+ + N E++LD++ TLW L FV K S+ +NN N +
Sbjct: 266 IIRKRNGHLAQDGDEIELDIEVVDTETLWELDRFVYNCKKLMSKIKRQALVSNNQNTAEE 325
Query: 283 NNEKDNSN 290
N+ S+
Sbjct: 326 GNKSPVSD 333
>gi|405967643|gb|EKC32780.1| Bromodomain testis-specific protein [Crassostrea gigas]
Length = 1173
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ + +AWPF PVD + LGLHDY+++I+KPMD TIK KM+ ++ Y+ + DVR
Sbjct: 361 VGEKAYAWPFYKPVDADVLGLHDYHDIIKKPMDLGTIKKKMESRE---YKTAAQFAEDVR 417
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
L+F N +YN DV VMA+ L + FE K+ +
Sbjct: 418 LIFTNCYRYNPTDSDVVVMARKLQDVFEVKYATM 451
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD++ L L DYY++I++PMD TIK ++ + Y
Sbjct: 78 LQYLQKTVLKAVWRHQYAWPFHKPVDIKLLNLPDYYDIIKQPMDLGTIKERL---ETNFY 134
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
+ E D +F N YN+ ++D+ +MA+ L + F +K Q+ P
Sbjct: 135 YSATECIQDFNQMFTNCYIYNNPKEDIVLMAQVLEKLFLQKVAQMPP 181
>gi|395530391|ref|XP_003767279.1| PREDICTED: bromodomain testis-specific protein [Sarcophilus
harrisii]
Length = 840
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
Query: 41 FITQH-KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDV LGLH+YY+V++ PMD TIK KMD ++ Y++ E AD
Sbjct: 224 FAKKHVAYAWPFYKPVDVTALGLHNYYDVVKNPMDLGTIKKKMDNQE---YKDAHEFAAD 280
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA++L + FE ++ ++
Sbjct: 281 VRLMFMNCYKYNPPDHEVVAMARTLQDVFEMQFAKI 316
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 62 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 121
+ DYY +I+KPMD STIK +++ K Y E D++ +F N YN DD+ +MA
Sbjct: 1 MMDYYSIIKKPMDLSTIKKRLEHK---YYVKSSECIEDLKTMFANCYLYNKPGDDIVLMA 57
Query: 122 KSLLEKFEEKWLQLLP 137
++L + F +K Q+ P
Sbjct: 58 QALEKLFTQKMSQMPP 73
>gi|120577456|gb|AAI30180.1| Brd2-a protein [Xenopus laevis]
Length = 518
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVDV LGLHDYY++I+ PMD STIK KMD ++ +++ +E A +RL+F N
Sbjct: 342 YAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSRE---FKDAQEFAAAIRLMFSN 398
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE + ++
Sbjct: 399 CYKYNPPDHDVVAMARKLQDVFEFSYAKM 427
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 27 SASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 86
S + LQ+ + + +H+++WPF PVD LGL DY+++I++PMD T+K ++ +
Sbjct: 55 STNQLQYLHKAVVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTVKKRL---E 111
Query: 87 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
Y + E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 112 NNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKMFLQKVAQM 160
>gi|54311476|gb|AAH84758.1| Brd2-A-prov protein, partial [Xenopus laevis]
Length = 525
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVDV LGLHDYY++I+ PMD STIK KMD ++ +++ +E A +RL+F N
Sbjct: 342 YAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSRE---FKDAQEFAAAIRLMFSN 398
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE + ++
Sbjct: 399 CYKYNPPDHDVVAMARKLQDVFEFSYAKM 427
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 27 SASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 86
S + LQ+ + + +H+++WPF PVD LGL DY+++I++PMD T+K ++ +
Sbjct: 55 STNQLQYLHKAVVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTVKKRL---E 111
Query: 87 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
Y + E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 112 NNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKMFLQKVAQM 160
>gi|161611729|gb|AAI55902.1| Brd2-a protein [Xenopus laevis]
Length = 517
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVDV LGLHDYY++I+ PMD STIK KMD ++ +++ +E A +RL+F N
Sbjct: 342 YAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSRE---FKDAQEFAAAIRLMFSN 398
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE + ++
Sbjct: 399 CYKYNPPDHDVVAMARKLQDVFEFSYAKM 427
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 27 SASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 86
S + LQ+ + + +H+++WPF PVD LGL DY+++I++PMD T+K ++ +
Sbjct: 55 STNQLQYLHKAVVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTVKKRL---E 111
Query: 87 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
Y + E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 112 NNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKMFLQKVAQM 160
>gi|297734375|emb|CBI15622.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 107/221 (48%), Gaps = 53/221 (23%)
Query: 40 SFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
S + H++ W F +PVDV L + DY+ VI+ PMD TIK+KM + Y + + AD
Sbjct: 169 SRLMTHQFGWIFNNPVDVVELKIPDYFTVIKHPMDLGTIKSKMASGE---YLSPFDFAAD 225
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL---LPKVMEEEKRQEEEEAKAQLD 156
VRL F NAM YN +DVH MA++L + FE +W + LPKV A D
Sbjct: 226 VRLTFSNAMTYNPRGNDVHFMAETLNKFFEMRWKPIEKKLPKV-------------APTD 272
Query: 157 MQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRL---S 213
++ E NK R M+ EE+ NLGT L L
Sbjct: 273 HKIKMEP---NK--------------------------RIMTKEERHNLGTELETLLGEL 303
Query: 214 PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
P+D+ L+ + N A+ E+++D+DA S+ TL+ L+
Sbjct: 304 PDDIVDFLKEQSFNE--NQASEDEIEIDIDALSDDTLFTLR 342
>gi|347968595|ref|XP_312107.4| AGAP002807-PA [Anopheles gambiae str. PEST]
gi|333467931|gb|EAA07774.4| AGAP002807-PA [Anopheles gambiae str. PEST]
Length = 870
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E AD
Sbjct: 419 FSKKHSGYAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAAD 475
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFE 129
VRL+F N KYN DV M + L + FE
Sbjct: 476 VRLIFTNCYKYNPPDHDVVAMGRKLQDVFE 505
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 4/122 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
L F +R + +H+++WPF PVD + L L DY+++I++PMD TIK +++ Y
Sbjct: 37 LHFLLRTVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNY---Y 93
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 150
+E D +F N YN +DV VMA++L + F K + L+PK E + Q+ +
Sbjct: 94 WTSKECIQDFNTMFTNCYVYNKPGEDVVVMAQTLEKLFLTK-VSLMPKDETEMEVQQPKG 152
Query: 151 AK 152
K
Sbjct: 153 GK 154
>gi|27696271|gb|AAH43784.1| Brd2-A-prov protein, partial [Xenopus laevis]
Length = 539
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVDV LGLHDYY++I+ PMD STIK KMD ++ +++ +E A +RL+F N
Sbjct: 362 YAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSRE---FKDAQEFAAAIRLMFSN 418
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE + ++
Sbjct: 419 CYKYNPPDHDVVAMARKLQDVFEFSYAKM 447
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 27 SASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 86
S + LQ+ + + +H+++WPF PVD LGL DY+++I++PMD T+K ++ +
Sbjct: 75 STNQLQYLHKAVVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTVKKRL---E 131
Query: 87 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
Y + E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 132 NNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKMFLQKVAQM 180
>gi|76780317|gb|AAI06310.1| Brd2-A-prov protein, partial [Xenopus laevis]
Length = 517
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVDV LGLHDYY++I+ PMD STIK KMD ++ +++ +E A +RL+F N
Sbjct: 342 YAWPFYKPVDVSALGLHDYYDIIKHPMDMSTIKKKMDSRE---FKDAQEFAAAIRLMFSN 398
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE + ++
Sbjct: 399 CYKYNPPDHDVVAMARKLQDVFEFSYAKM 427
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 27 SASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 86
S + LQ+ + + +H+++WPF PVD LGL DY+++I++PMD T+K ++ +
Sbjct: 55 STNQLQYLHKAVVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGTVKKRL---E 111
Query: 87 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
Y + E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 112 NNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKMFLQKVAQM 160
>gi|224056555|ref|XP_002298908.1| global transcription factor group [Populus trichocarpa]
gi|222846166|gb|EEE83713.1| global transcription factor group [Populus trichocarpa]
Length = 411
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +H++ W F PVD + L LHDYY++I+ PMD T+K+++ Y++ +E DVR
Sbjct: 42 LMKHQYGWVFNEPVDAKKLKLHDYYKIIKHPMDLGTVKSRLSK---NWYKSPKEFAEDVR 98
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
L F NAMKYN++ DVH MA LL+ FEE W
Sbjct: 99 LTFNNAMKYNEKGQDVHAMADKLLKIFEENW 129
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 187 RETVIQKCRK-------MSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVD 239
R +V+ K +K M+ EEK+ L L L E L ++I+ + NP E++
Sbjct: 236 RTSVLNKPKKNETVRGVMTYEEKQKLSIHLQSLPSEKLESVVQIIRKRNPGLFQQEDEIE 295
Query: 240 LDMDAQSELTLWRLKVFV 257
+D+D+ TLW L +V
Sbjct: 296 VDIDSFDNETLWELHGYV 313
>gi|194211115|ref|XP_001493233.2| PREDICTED: bromodomain testis-specific protein-like isoform 2
[Equus caballus]
Length = 928
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY+V++KPMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 290 YAWPFYNPVDVNALGLHNYYDVVKKPMDLGTIKGKMDNQE---YKDAYEFAADVRLMFMN 346
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+YN +V MA+ L + FE + ++
Sbjct: 347 CYRYNPPDHEVVTMARMLQDVFEMHFAKI 375
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TI+ +++ K Y
Sbjct: 31 LQYLQKVVLKALWKHGFSWPFQQPVDAVKLQLPDYYTIIKNPMDLNTIQKRLEHK---YY 87
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 88 VKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFRQKLSQM 132
>gi|387014800|gb|AFJ49519.1| bromodomain-containing protein 2-like [Crotalus adamanteus]
Length = 715
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+E+I+ PMD S+IK KM+ ++ YR+ +E +DVRL+F N
Sbjct: 373 YAWPFYKPVDASALGLHDYHEIIKHPMDLSSIKRKMENRE---YRDAQEFASDVRLMFSN 429
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE + ++
Sbjct: 430 CYKYNPPDHDVVAMARKLQDVFEFSYAKM 458
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK +++ +G Y
Sbjct: 80 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLE--NGY-Y 136
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 137 WSSGECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQM 181
>gi|427798983|gb|JAA64943.1| Putative bromodomain-containing protein 2, partial [Rhipicephalus
pulchellus]
Length = 852
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+E+I+ PMD T+K KMD ++ Y++ E D
Sbjct: 393 FAKKHAGYAWPFYKPVDAELLGLHDYHEIIKHPMDLGTVKQKMDNRE---YKSPEEFAGD 449
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 450 VRLIFTNCYKYNPPDHEVVAMARKLQDVFEMRYAKM 485
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ ++ + +H++AWPF PVD L L DY+ +I PMD TIK ++ + Y
Sbjct: 63 LQHLLKVVMKAMWKHQFAWPFQQPVDTVKLNLPDYHRIIRHPMDLGTIKKRL---EHCYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ +E D + +F N YN +DV +MA++L + F K ++
Sbjct: 120 SSAQECIEDFKTMFTNCYVYNKPGEDVVLMAQALEKLFLTKITEM 164
>gi|449492943|ref|XP_004159148.1| PREDICTED: transcription factor GTE9-like [Cucumis sativus]
Length = 491
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 115/239 (48%), Gaps = 18/239 (7%)
Query: 20 EGGCKNLSASLLQFFVRQARSF---ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFS 76
+ N S + ++Q + H++AW F PVDV L L DY+ +I+ PMD
Sbjct: 122 QASVSNTSTATSAILMKQCEQLLKRVMSHQYAWVFNTPVDVVKLNLPDYFTIIKHPMDLG 181
Query: 77 TIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
T+K+K+ Y + + ADVRL F NAM YN +DVHVMA L F+ +W +
Sbjct: 182 TVKSKLSSG---AYSSPLDFLADVRLTFSNAMTYNPPGNDVHVMADVLNSYFDMRWKAIE 238
Query: 137 PKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK 196
K+ + + +++ + D++ T + V K K + S EV T I
Sbjct: 239 KKLPKTDGHSLPTKSRPREDVE-TVKNVPLKKMK-VASRPQEV---------TPIPSKLV 287
Query: 197 MSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLK 254
M+ EEK +LG L L E ++ + E + + E ++D+D S+ TL++L+
Sbjct: 288 MTDEEKLSLGRELESLLGEMPLHIIDFLREQSSGGRECGEDEFEIDIDDLSDDTLFKLR 346
>gi|226493082|ref|NP_001142377.1| hypothetical protein [Zea mays]
gi|194708534|gb|ACF88351.1| unknown [Zea mays]
gi|414585390|tpg|DAA35961.1| TPA: hypothetical protein ZEAMMB73_681303 [Zea mays]
Length = 451
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 104/217 (47%), Gaps = 9/217 (4%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
F PV+VE LGLHDY+ VI++PMD T+K +G Y + + ADVRL F NA++Y
Sbjct: 129 FNAPVEVERLGLHDYHAVIKRPMDLGTVK---EGLAAGRYASHDDFAADVRLTFTNALRY 185
Query: 111 NDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAK 170
N +VH A +LL FE + + L EE + E + A + +AK
Sbjct: 186 NPVGHEVHTFAGALLAYFERMYKEAL--ACFEEDCKRPEPPRPVPPELTPPPAAEPVEAK 243
Query: 171 ELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPS 230
++ V M+ RE R+MS EEK L L L E + L+IV + N +
Sbjct: 244 -VKPRAGNVRMRKPKAREP---NKREMSLEEKNMLRVGLESLPEEKMHNVLQIVRKRNNN 299
Query: 231 FHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRS 267
E++LD+D T W L FV KA +S
Sbjct: 300 PEMLGDEIELDIDEMDVETQWELDRFVANFNKALKKS 336
>gi|414588437|tpg|DAA39008.1| TPA: hypothetical protein ZEAMMB73_513409 [Zea mays]
Length = 577
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ HK W F PVD + G+ DY++VI PMD TIKNK+ K Y ++ E ADVR
Sbjct: 72 LIDHKCGWLFKEPVDPDLYGIPDYFDVIRSPMDLGTIKNKLTKKK---YVSIEEFAADVR 128
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
L F NAMKYN +DVH+ AK L E F+ +W
Sbjct: 129 LTFSNAMKYNPPGNDVHIFAKELNEMFDSEW 159
>gi|241604623|ref|XP_002405922.1| bromodomain-containing protein 2, brd2, putative [Ixodes
scapularis]
gi|215502589|gb|EEC12083.1| bromodomain-containing protein 2, brd2, putative [Ixodes
scapularis]
Length = 885
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 68/117 (58%), Gaps = 9/117 (7%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD + LGLHDY+E+I+ PMD T+K KMD ++ Y++ E D
Sbjct: 408 FAKKHAGYAWPFYKPVDADLLGLHDYHEIIKHPMDLGTVKQKMDNRE---YKSPEEFAGD 464
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLD 156
VRL+F N KYN +V MA+ L + FE ++ + M +E Q + +Q D
Sbjct: 465 VRLIFTNCYKYNPPDHEVVAMARKLQDVFEMRYAK-----MPDEPPQSDPAPVSQTD 516
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R I +H++AWPF PVD L L DY+ +I+ PMD TIK ++ + Y
Sbjct: 39 LQYLLRVVMKAIWKHQFAWPFQQPVDTVRLNLPDYHRIIDHPMDLGTIKKRL---ENYYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKF 128
+ E D +F N YN +DV +MA++L + F
Sbjct: 96 ASASECIQDFNTMFTNCYVYNKPGEDVVLMAQALEKLF 133
>gi|120431736|ref|NP_473395.2| bromodomain testis-specific protein isoform A [Mus musculus]
gi|425906068|sp|Q91Y44.3|BRDT_MOUSE RecName: Full=Bromodomain testis-specific protein; AltName:
Full=Bromodomain-containing female sterile homeotic-like
protein; AltName: Full=RING3-like protein
gi|148688221|gb|EDL20168.1| bromodomain, testis-specific [Mus musculus]
Length = 956
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVD + LGLH+YY+V++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 290 YAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQE---YKDAYEFAADVRLMFMN 346
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN +V MA++L + FE
Sbjct: 347 CYKYNPPDHEVVAMARTLQDVFE 369
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF R + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 31 LQFLQRVVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENK---YY 87
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ VMA++L + F +K Q+
Sbjct: 88 EKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALEKLFMQKLSQM 132
>gi|13957951|gb|AAK50736.1| bromodomain-containing female sterile homeotic-like protein [Mus
musculus]
Length = 956
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVD + LGLH+YY+V++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 290 YAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQE---YKDAYEFAADVRLMFMN 346
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN +V MA++L + FE
Sbjct: 347 CYKYNPPDHEVVAMARTLQDVFE 369
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF R + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 31 LQFLQRVVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENK---YY 87
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ VMA++L + F +K Q+
Sbjct: 88 EKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALEKLFMQKLSQM 132
>gi|410967748|ref|XP_003990377.1| PREDICTED: bromodomain testis-specific protein [Felis catus]
Length = 939
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 291 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKGKMDNQE---YKDAYEFAADVRLMFMN 347
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA++L + FE + ++
Sbjct: 348 CYKYNPPDHEVVTMARTLQDVFEMHFAKI 376
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 31 LQYLQKVVLKALWRHNFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLEHK---YY 87
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D ++F N YN DD+ +MA++L + F +K Q+
Sbjct: 88 MKASECIEDFNIMFSNCYLYNKPGDDIVLMAQALEKLFRQKLSQM 132
>gi|357166043|ref|XP_003580578.1| PREDICTED: transcription factor GTE7-like [Brachypodium distachyon]
Length = 458
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 107/242 (44%), Gaps = 13/242 (5%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
F PV+VE LGLHDY+ VI+ PMD T++ ++ K Y + ADVRL F NA++Y
Sbjct: 144 FNAPVEVERLGLHDYHAVIKSPMDLGTVRARLAAK---AYPSHDAFAADVRLTFSNALRY 200
Query: 111 NDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAK 170
N DVH+ A LL FE+ + + EE KR V + K
Sbjct: 201 NPAGHDVHIFAGDLLASFEKMYRAAVSWFEEECKRLAPPPPMPVAAELPPPPVVVPAQVK 260
Query: 171 ELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPS 230
+ + + + N RE MS +EK L L L E + L+IV + N +
Sbjct: 261 PRAARMRKPKAREPNKRE--------MSLDEKNMLREGLESLPEEKMHNVLQIVRKRNVN 312
Query: 231 FHATAQEVDLDMDAQSELTLWRLKVFVQESLKA--ASRSSGDMGGNNNNNNDDNNNEKDN 288
E++LD+D T W L FV KA SR + M G+ N+ E N
Sbjct: 313 PALLGDEIELDIDEMDIETQWELDRFVNNFNKALNKSRRAAMMNGDGAVVNNATVTEAVN 372
Query: 289 SN 290
+
Sbjct: 373 GD 374
>gi|395822025|ref|XP_003784325.1| PREDICTED: bromodomain testis-specific protein [Otolemur garnettii]
Length = 928
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 294 YAWPFYNPVDVNALGLHNYYDIVKHPMDLGTIKGKMDNQE---YKDAYEFAADVRLMFMN 350
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MAK L + FE + ++
Sbjct: 351 CYKYNPPDHEVVTMAKMLQDVFEMHFAKI 379
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF HPVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 31 LQYLQKVVLKALWKHSFSWPFQHPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENK---YY 87
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D+ +F N YN DD+ +MA++L + F +K Q+
Sbjct: 88 VKASECIEDLNTMFSNCYLYNKPGDDIVLMAQALEKLFIQKLSQM 132
>gi|427780035|gb|JAA55469.1| Putative bromodomain-containing protein 2 [Rhipicephalus
pulchellus]
Length = 873
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E LGLHDY+E+I+ PMD T+K KMD ++ Y++ E DVRL+F N
Sbjct: 419 YAWPFYKPVDAELLGLHDYHEIIKHPMDLGTVKQKMDNRE---YKSPEEFAGDVRLIFTN 475
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 476 CYKYNPPDHEVVAMARKLQDVFEMRYAKM 504
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ ++ + +H++AWPF PVD L L DY+ +I PMD TIK ++ + Y
Sbjct: 63 LQHLLKVVMKAMWKHQFAWPFQQPVDTVKLNLPDYHRIIRHPMDLGTIKKRL---EHCYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ +E D + +F N YN +DV +MA++L + F K ++
Sbjct: 120 SSAQECIEDFKTMFTNCYVYNKPGEDVVLMAQALEKLFLTKITEM 164
>gi|159164649|pdb|2I8N|A Chain A, Solution Structure Of The Second Bromodomain Of Brd4
Length = 114
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 66/97 (68%), Gaps = 4/97 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 14 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 70
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
VRL+F N KYN +V MA+ L + FE ++ ++L
Sbjct: 71 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKML 107
>gi|308198663|pdb|3ONI|A Chain A, Crystal Structure Of The Second Bromodomain Of Human Brd2
In Complex With The Inhibitor Jq1
Length = 114
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 27 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 83
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 84 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 112
>gi|348511137|ref|XP_003443101.1| PREDICTED: bromodomain-containing protein 2-like [Oreochromis
niloticus]
Length = 819
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD STIK KMD ++ YR+ ++ +DVRL+F N
Sbjct: 391 YAWPFYTPVDAAALGLHDYHDIIKCPMDLSTIKRKMDCRE---YRDAQQFASDVRLMFSN 447
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 448 CYKYNPPDHDVVGMARKLQDVFEFRFAKM 476
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H +AWPF PVD L L DY+++I++PMD TIK ++ + Y
Sbjct: 75 LQYLQKTLMKSLWRHHFAWPFQEPVDAYKLNLPDYHKIIKQPMDMGTIKKRL---ENNFY 131
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
R+ E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 132 RSASECIQDFNTMFTNCYIYNKPTDDIVLMAQSLEKIFLQKVAQM 176
>gi|195060207|ref|XP_001995768.1| GH17935 [Drosophila grimshawi]
gi|193896554|gb|EDV95420.1| GH17935 [Drosophila grimshawi]
Length = 1220
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 41 FITQHKW-AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ +++ E AD
Sbjct: 526 FSKKHSGCAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE---FKSAPEFAAD 582
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV M + L + FE ++ +
Sbjct: 583 VRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 618
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ F+ +H ++WPF PVD + L L DY+++I++PMD TIK +++ Y
Sbjct: 39 LQYIIKTVMKFLWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNY---Y 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 150
+ +E D+ +F N YN +DV VMA +L E+ +LQ + + +EE E
Sbjct: 96 WSAKEAVNDINTMFTNCSVYNKPGEDVVVMAHAL----EKVYLQKIEGMPKEEVELEPVT 151
Query: 151 AKA 153
AK
Sbjct: 152 AKG 154
>gi|410902639|ref|XP_003964801.1| PREDICTED: uncharacterized protein LOC101061335 [Takifugu rubripes]
Length = 1416
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD + LGLHDY+++I+ PMD STIK K++ + YR +E ADVRL+F N
Sbjct: 389 YAWPFYKPVDADALGLHDYHDIIKHPMDLSTIKAKLENRQ---YREPQEFAADVRLMFSN 445
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 446 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 474
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF ++ + +H++AWPF PVD L L DYY +I+ PMD TIK ++ + + Y
Sbjct: 50 LQFLLKMVLKTLWKHQFAWPFQAPVDAVKLNLPDYYTIIKTPMDMGTIKKRL---ENSYY 106
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
N +E D +F N YN DD+ +MA++L + F +K ++
Sbjct: 107 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKVFLQKVTEM 151
>gi|255536997|ref|XP_002509565.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223549464|gb|EEF50952.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 718
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 94/174 (54%), Gaps = 16/174 (9%)
Query: 40 SFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYA 98
S + H++ W F PVDV L + DYY +I+ PMD TIK+ + +G Y + E A
Sbjct: 114 SRLMSHQYGWVFKEPVDVVKLNIPDYYTIIKHPMDLGTIKSNI----CSGLYSSPLEFLA 169
Query: 99 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ 158
DVRL F+NAM+YN + DVH+MA +L + FE +W + K+ + + ++ + D+Q
Sbjct: 170 DVRLTFRNAMEYNPKGSDVHIMADTLSKFFEVRWKAIEKKLPKIDTHGLPSKSGPREDLQ 229
Query: 159 LTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRL 212
+T+ + K +++ S +E+ + R M+ +EK+ LG L L
Sbjct: 230 ITE--ISPIKKRKISSYQHEI---------VAVPVRRVMTDDEKQKLGKELESL 272
>gi|148725667|emb|CAN87975.1| novel protein (zgc:77289) [Danio rerio]
Length = 729
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+E+I++PMD ST+K KMD ++ Y + + ADVRL+F N
Sbjct: 313 YAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSRE---YPDAQNFAADVRLMFSN 369
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE K+ ++
Sbjct: 370 CYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY++VI+ PMD TIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRL---ENNYY 91
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 92 WTAGECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 136
>gi|410919159|ref|XP_003973052.1| PREDICTED: bromodomain-containing protein 3-like [Takifugu
rubripes]
Length = 590
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+ AWPF PVDV LGLHDY+++I++PMD STI+ KMD + Y E ADVRL+
Sbjct: 287 HYACAWPFYSPVDVVALGLHDYHDIIKQPMDLSTIRKKMDQGE---YAQPAEFAADVRLM 343
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
F N KYN +V MA+ L E FE +++++
Sbjct: 344 FSNCYKYNPPSHEVVHMARKLQEVFEARYVKV 375
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+H ++WPF PVD LGL DYY VI PMD STI ++ K Y E D+ +
Sbjct: 68 RHHFSWPFQRPVDAVALGLPDYYTVITNPMDLSTIMMRLKNKY---YWQALECIQDLNTM 124
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 150
F N YN D + MA++ LEK ++ L L+PK E K ++ E
Sbjct: 125 FSNCYVYNQPGDGIVFMAQT-LEKLCQEKLTLMPKPECEAKGRKMSE 170
>gi|47208417|emb|CAF92198.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1579
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD + LGLHDY+++I+ PMD STIK K++ + YR +E ADVRL+F N
Sbjct: 458 YAWPFYKPVDADALGLHDYHDIIKHPMDLSTIKVKLENRQ---YREPQEFAADVRLMFSN 514
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 515 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 543
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 35/137 (25%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGL------------------------------ 60
LQF ++ + +H++AWPF PVD L
Sbjct: 44 LQFLLKMVLKTLWKHQFAWPFHAPVDAVKLNLPVSVAPRDCSHLDIQYKYYTQFCEVNCQ 103
Query: 61 --GLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVH 118
L DYY +I+ PMD TIK ++ + + Y N +E D +F N YN DD+
Sbjct: 104 MQSLQDYYTIIKTPMDMGTIKKRL---ENSYYWNAQECIQDFNTMFTNCYIYNKPGDDIV 160
Query: 119 VMAKSLLEKFEEKWLQL 135
+MA++L + F +K ++
Sbjct: 161 LMAEALEKVFLQKVTEM 177
>gi|300121324|emb|CBK21704.2| unnamed protein product [Blastocystis hominis]
Length = 304
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 127/264 (48%), Gaps = 45/264 (17%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ HKWA PF+HPVD LGL DY++V++ PMDFSTI ++++ + R+ E + V
Sbjct: 11 LMMHKWAGPFLHPVDPVALGLSDYFDVVKHPMDFSTILSQIENHE---LRSKDEFASKVN 67
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------------------------- 135
LVF NA+ YN + DVH+MA L F ++ +
Sbjct: 68 LVFDNALLYNSKGSDVHIMASELQSLFAKEMETITGQIFAAGPDAQAPTYYVPSRRERAP 127
Query: 136 -------LPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRE 188
LP+V E + E KA+L + E +++ + ++L EL+ + ++ N R+
Sbjct: 128 LPDIPPKLPRVSESRPAKSSAE-KARLAQKEEMEMMKS-RIQQLEGELSRMTQEV-NERQ 184
Query: 189 TVIQK---CRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQ 245
+K R M+ EEKK L + +L DL + + IV +++LD+ A
Sbjct: 185 GKGEKALDARPMTMEEKKALSMEINQLKGSDLEEVVRIVWGQMAGEQMQQNDIELDLSAM 244
Query: 246 SELTLWRLKVFV---QESLKAASR 266
TL +L+ ++ +E+ KA R
Sbjct: 245 PNETLRKLERYIVQCKEAKKAPKR 268
>gi|67967916|dbj|BAE00440.1| unnamed protein product [Macaca fascicularis]
Length = 609
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 291 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 347
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 348 CYKYNPPDHEVVTMARRLQDVFETHFSKIPVEPVESMPLCYIKTDITETTGRENTNEASS 407
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 408 EGNSSGASEDERVQRLAKLQEQLKAVHQQLQVLSQVPFRK 447
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 32 LQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENK---YY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 89 VKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 133
>gi|159164570|pdb|2G4A|A Chain A, Solution Structure Of A Bromodomain From Ring3 Protein
Length = 116
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 21 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 77
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 78 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 106
>gi|157834826|pdb|2DVV|A Chain A, Crystal Structure Of The Second Bromodomain Of The Human
Brd2 Protein
gi|162329881|pdb|2E3K|A Chain A, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
gi|162329882|pdb|2E3K|B Chain B, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
gi|162329883|pdb|2E3K|C Chain C, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
gi|162329884|pdb|2E3K|D Chain D, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
Length = 112
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 25 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 81
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 82 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 110
>gi|148725668|emb|CAN87976.1| novel protein (zgc:77289) [Danio rerio]
Length = 664
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+E+I++PMD ST+K KMD ++ Y + + ADVRL+F N
Sbjct: 313 YAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSRE---YPDAQNFAADVRLMFSN 369
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE K+ ++
Sbjct: 370 CYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY++VI+ PMD TIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRL---ENNYY 91
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 92 WTAGECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 136
>gi|359488601|ref|XP_002270843.2| PREDICTED: transcription factor GTE8-like [Vitis vinifera]
Length = 739
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 133/249 (53%), Gaps = 22/249 (8%)
Query: 27 SASLLQFFVRQARSFITQ---HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 83
+AS+L ++Q + + Q H+ W F PVD+ L + DY+ +I+ PMD TIK
Sbjct: 169 TASVL--LMKQCETLLKQLMSHQHGWVFNEPVDIVKLNIPDYFTIIKHPMDLGTIK---- 222
Query: 84 GKDGTG-YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE 142
GK +G Y + + ADVRL F NA +N +DVH MA +L + FE +W + K+
Sbjct: 223 GKIASGAYSSPLDFAADVRLTFSNAQTFNPPGNDVHKMADTLSKFFEVRWKTIEKKLPVT 282
Query: 143 EKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEK 202
+ + + +M+ T + + +K +++ S +EV ++E V QK M+ +EK
Sbjct: 283 KTQSLPGKYGTHGEMK-TAKPMPPSKKRKVTSTHHEV------IQEPV-QKV--MTADEK 332
Query: 203 KNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ--EVDLDMDAQSELTLWRLKVFVQES 260
+NLG L L E + ++ + ++ + T + E+++D++A S+ TL+ L+ + +
Sbjct: 333 RNLGRDLEDLLGEIPVQIIDFLRVHSSNGRETGEDDEIEVDIEALSDDTLFTLRKLLDDY 392
Query: 261 LKAASRSSG 269
L+ +S G
Sbjct: 393 LQEKQKSHG 401
>gi|297279234|ref|XP_001100884.2| PREDICTED: bromodomain testis-specific protein-like [Macaca
mulatta]
Length = 983
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 327 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 383
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 384 CYKYNPPDHEVVTMARMLQDVFETHFSKIPVEPVESMPLCYIKTDITETTGRENTNEASS 443
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 444 EGNSSGDSEDERVQRLAKLQEQLKAVHQQLQVLSQVPFRK 483
>gi|291398522|ref|XP_002715912.1| PREDICTED: Bromodomain testis-specific protein-like [Oryctolagus
cuniculus]
Length = 953
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD Y++ E ADVRL+F N
Sbjct: 288 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKGKMDSHQ---YKDACEFAADVRLMFMN 344
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA++L + FE + ++
Sbjct: 345 CYKYNPPDHEVVTMARTLQDVFEMHFARI 373
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 31 LQYLQKVVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKSPMDLNTIKKRLENK---YY 87
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 88 VKASECIEDFNTMFSNCYLYNKPGDDIVLMAQTLEKLFMQKLSQM 132
>gi|134105429|pdb|2OUO|A Chain A, Crystal Structure Of The Bromo Domain 2 In Human
Bromodomain Containing Protein 4 (Brd4)
gi|340707485|pdb|2YEM|A Chain A, Crystal Structure Of The Second Bromodomain Of Human Brd4
With The Inhibitor Gw841819x
gi|340707486|pdb|2YEM|B Chain B, Crystal Structure Of The Second Bromodomain Of Human Brd4
With The Inhibitor Gw841819x
Length = 130
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 35 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 91
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 92 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 127
>gi|426020760|sp|D4A7T3.1|BRDT_RAT RecName: Full=Bromodomain testis-specific protein
Length = 952
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV+ LGLH+YY++++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 290 YAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIKGKMDKQE---YKDACEFAADVRLMFMN 346
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE + ++
Sbjct: 347 CYKYNPPDHEVVTMARMLQDVFEMHFAKI 375
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF R + +H ++WPF PVD L L DYY +IE PMD STIK +++ + Y
Sbjct: 31 LQFLQRVVLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLENR---YY 87
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ VMA++L + F +K Q+
Sbjct: 88 EKASECVGDFNTMFSNCYLYNKPGDDIVVMAQALEKLFMQKLSQM 132
>gi|449455878|ref|XP_004145677.1| PREDICTED: transcription factor GTE8-like [Cucumis sativus]
Length = 750
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 115/239 (48%), Gaps = 18/239 (7%)
Query: 20 EGGCKNLSASLLQFFVRQARSF---ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFS 76
+ N S + ++Q + H++AW F PVDV L L DY+ +I+ PMD
Sbjct: 171 QASVSNTSTATSAILMKQCEQLLKRVMSHQYAWVFNTPVDVVKLNLPDYFTIIKHPMDLG 230
Query: 77 TIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
T+K+K+ Y + + ADVRL F NAM YN +DVHVMA L F+ +W +
Sbjct: 231 TVKSKLSSG---AYSSPLDFLADVRLTFSNAMTYNPPGNDVHVMADVLNSYFDMRWKAIE 287
Query: 137 PKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK 196
K+ + + +++ + D++ T + V K K + S EV T I
Sbjct: 288 KKLPKTDGHSLPTKSRPREDVE-TVKNVPLKKMK-VASRPQEV---------TPIPSKLV 336
Query: 197 MSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLK 254
M+ EEK +LG L L E ++ + E + + E ++D+D S+ TL++L+
Sbjct: 337 MTDEEKLSLGRELESLLGEMPLHIIDFLREQSSGGRECGEDEFEIDIDDLSDDTLFKLR 395
>gi|392332962|ref|XP_003752750.1| PREDICTED: bromodomain testis-specific protein [Rattus norvegicus]
gi|149028625|gb|EDL83966.1| bromodomain, testis-specific [Rattus norvegicus]
Length = 947
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV+ LGLH+YY++++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 290 YAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIKGKMDKQE---YKDACEFAADVRLMFMN 346
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE + ++
Sbjct: 347 CYKYNPPDHEVVTMARMLQDVFEMHFAKI 375
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF R + +H ++WPF PVD L L DYY +IE PMD STIK +++ + Y
Sbjct: 31 LQFLQRVVLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLENR---YY 87
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ VMA++L + F +K Q+
Sbjct: 88 EKASECVGDFNTMFSNCYLYNKPGDDIVVMAQALEKLFMQKLSQM 132
>gi|395759239|pdb|2LSP|B Chain B, Solution Structures Of Brd4 Second Bromodomain With
Nf-Kb-K310ac Peptide
Length = 128
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 33 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 89
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 90 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 125
>gi|392352984|ref|XP_003751370.1| PREDICTED: bromodomain testis-specific protein [Rattus norvegicus]
Length = 947
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV+ LGLH+YY++++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 290 YAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIKGKMDKQE---YKDACEFAADVRLMFMN 346
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE + ++
Sbjct: 347 CYKYNPPDHEVVTMARMLQDVFEMHFAKI 375
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF R + +H ++WPF PVD L L DYY +IE PMD STIK +++ + Y
Sbjct: 31 LQFLQRVVLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLENR---YY 87
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ VMA++L + F +K Q+
Sbjct: 88 EKASECVGDFNTMFSNCYLYNKPGDDIVVMAQALEKLFMQKLSQM 132
>gi|390352946|ref|XP_003728004.1| PREDICTED: uncharacterized protein LOC100892105 [Strongylocentrotus
purpuratus]
Length = 1350
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD + LGLHDY+E+I+ PMD T+K K++ +D Y+N + A+VRL+F N
Sbjct: 378 YAWPFFKPVDADVLGLHDYHEIIKTPMDMGTVKVKLENRD---YKNANDFAANVRLIFTN 434
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L FE K+ ++
Sbjct: 435 CYKYNPPDHDVVGMARKLQNVFEVKFAKM 463
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF HPVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 40 LQYLQKVVMKALWKHQFAWPFHHPVDPTKLALLDYFKIIKTPMDLGTIKKRL---ESIYY 96
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ +E +D L+F N YN +DV +MA++L + F K Q+
Sbjct: 97 HSAKECISDFNLMFTNCYVYNKPGEDVVLMAQALEKLFLTKVAQM 141
>gi|255072301|ref|XP_002499825.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226515087|gb|ACO61083.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 675
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 99/197 (50%), Gaps = 24/197 (12%)
Query: 31 LQFFVRQARSFITQ---HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 87
L+ RQ + + Q HKWA PF PVD L L Y E++++PMD T++ + + G
Sbjct: 285 LEVVNRQCLAALKQLMAHKWAHPFNKPVDHVALNLPTYPEIVKRPMDLGTVEANI--RKG 342
Query: 88 TGYRNVREIYADVRLVFKNAMKYNDERD-DVHVMAKSLLEKFEEKWLQLLPKVME----- 141
Y E++ADV LVF NA + + + DVHVMA +L E + ++W + + E
Sbjct: 343 GVYACAEEVHADVSLVFSNAKTFTPKPEMDVHVMAVALEEFWAQRWAAVADRAKEVEEGM 402
Query: 142 ------EEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCR 195
EK+ EE A+ +L A + + L +EL+ + QL++L+ CR
Sbjct: 403 TVEKECAEKKSEEMNARKRL-------ASEEMRCAGLMAELDRLRRQLDDLKRQTRSICR 455
Query: 196 KMSTEEKKNLGTALTRL 212
M+T EK L LT +
Sbjct: 456 PMTTAEKDQLRRNLTNI 472
>gi|47216871|emb|CAG11678.1| unnamed protein product [Tetraodon nigroviridis]
Length = 834
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I++PMD STIK KMD ++ Y + ++ ADVRL+F N
Sbjct: 423 YAWPFYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMDNRE---YLDSQQFAADVRLMFSN 479
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN DV MA+ L + FE
Sbjct: 480 CYKYNPPDHDVVAMARKLQDVFE 502
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H +AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 52 LQFLQKVLLKSLWRHHFAWPFHEPVDAVKLNLPDYHKIIKTPMDMGTIKKRL---ENNYY 108
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
R+ E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 109 RSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 153
>gi|410926019|ref|XP_003976476.1| PREDICTED: bromodomain-containing protein 3-like [Takifugu
rubripes]
Length = 820
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I++PMD STIK KMD ++ Y + ++ ADVRL+F N
Sbjct: 409 YAWPFYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMDNRE---YLDSQQFAADVRLMFSN 465
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN DV MA+ L + FE
Sbjct: 466 CYKYNPPDHDVVAMARKLQDVFE 488
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H +AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 81 LQFLQKVLLKSLWRHHFAWPFHEPVDAVKLNLPDYHKIIKTPMDMGTIKKRL---ENNYY 137
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
R+ E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 138 RSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 182
>gi|11067749|ref|NP_031397.1| bromodomain-containing protein 3 [Homo sapiens]
gi|12643726|sp|Q15059.1|BRD3_HUMAN RecName: Full=Bromodomain-containing protein 3; AltName:
Full=RING3-like protein
gi|46241518|gb|AAS82952.1| endothelial differentiation inhibitory protein D18 [Homo sapiens]
gi|119608519|gb|EAW88113.1| bromodomain containing 3, isoform CRA_a [Homo sapiens]
gi|119608521|gb|EAW88115.1| bromodomain containing 3, isoform CRA_a [Homo sapiens]
gi|168274318|dbj|BAG09579.1| bromodomain-containing protein 3 [synthetic construct]
Length = 726
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMDG++ Y + + ADVRL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGRE---YPDAQGFAADVRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|40788944|dbj|BAA05393.2| KIAA0043 [Homo sapiens]
Length = 731
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMDG++ Y + + ADVRL+F N
Sbjct: 335 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGRE---YPDAQGFAADVRLMFSN 391
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 392 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 420
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 44 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 100
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 101 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 145
>gi|194388908|dbj|BAG61471.1| unnamed protein product [Homo sapiens]
Length = 405
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMDG++ Y + + ADVRL+F N
Sbjct: 9 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGRE---YPDAQGFAADVRLMFSN 65
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 66 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 94
>gi|426363503|ref|XP_004048879.1| PREDICTED: bromodomain-containing protein 3 [Gorilla gorilla
gorilla]
Length = 726
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMDG++ Y + + ADVRL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGRE---YPDAQGFAADVRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|397503778|ref|XP_003822496.1| PREDICTED: bromodomain-containing protein 3 [Pan paniscus]
Length = 728
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMDG++ Y + + ADVRL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGRE---YPDAQGFAADVRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|114627431|ref|XP_001170358.1| PREDICTED: bromodomain-containing protein 3 isoform 8 [Pan
troglodytes]
gi|410223876|gb|JAA09157.1| bromodomain containing 3 [Pan troglodytes]
gi|410253994|gb|JAA14964.1| bromodomain containing 3 [Pan troglodytes]
gi|410301574|gb|JAA29387.1| bromodomain containing 3 [Pan troglodytes]
gi|410339465|gb|JAA38679.1| bromodomain containing 3 [Pan troglodytes]
Length = 726
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMDG++ Y + + ADVRL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGRE---YPDAQGFAADVRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|356516581|ref|XP_003526972.1| PREDICTED: transcription factor GTE10-like [Glycine max]
Length = 786
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 118/232 (50%), Gaps = 14/232 (6%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H++AW F PVDV L + DY+ VI+ PMD T+K ++ + Y N + ADVR
Sbjct: 220 LMSHQFAWVFNDPVDVVKLNIPDYFTVIKHPMDLGTVKKRITSGE---YSNPMDFAADVR 276
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L F NAM YN +DVH+MA++L + FE +W + K+ + E +++ +++
Sbjct: 277 LTFDNAMFYNPAGNDVHIMAETLSKFFETRWKAIEKKIPVIDCVASEPSRPTRVETEISD 336
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETV-IQKCRKMSTEEKKNLGTALTRLSPEDLCKA 220
T K K N+ ++ E ++ V +++ +K+S E L T + L P+ +
Sbjct: 337 RVPPTKKKK---ITPNDSSVKPEPVKRIVTVEEKQKLSLE----LETMIGEL-PDSIVDF 388
Query: 221 LEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMG 272
L + N E+++D+D S+ TL++L+ + + + +S G
Sbjct: 389 LREQSYNE--GQTNDDEIEIDIDTLSDDTLFKLRKLLDDYMLEKQKSQAKAG 438
>gi|332255339|ref|XP_003276790.1| PREDICTED: bromodomain-containing protein 3 [Nomascus leucogenys]
Length = 726
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMDG++ Y + + ADVRL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGRE---YPDAQGFAADVRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|222422933|dbj|BAH19453.1| AT5G14270 [Arabidopsis thaliana]
Length = 549
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 109/223 (48%), Gaps = 17/223 (7%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H++ W F PVDV L + DY+ VIE PMD T+KNK+ GT Y E ADVR
Sbjct: 148 LMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKL--TSGT-YSCPSEFAADVR 204
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L F NAM YN +DV+VMA +L + FE +W L K+ + E A + +
Sbjct: 205 LTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKLSGTKVHTEPSNLDAHKEKHIVI 264
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKK-NLGTALTRLSPEDLCKA 220
K K VD E V+ +++ T+E + LG L L+ E +
Sbjct: 265 PVPMAKKRK-----TTAVDC------ENVVDPAKRVMTDEDRLKLGKDLESLT-EFPAQL 312
Query: 221 LEIVAENNPSFHATA-QEVDLDMDAQSELTLWRLKVFVQESLK 262
+ + ++N + E+++D++ S+ L++L+ + E L+
Sbjct: 313 INFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLRDLLDEHLR 355
>gi|449674634|ref|XP_002169264.2| PREDICTED: bromodomain-containing protein 4-like [Hydra
magnipapillata]
Length = 1019
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PV E LGLHDY+++I+KPMD T+K KMD ++ Y + + DVRL+F N
Sbjct: 320 YAWPFYKPVQAEALGLHDYFDIIKKPMDLGTVKFKMDCRE---YSSPSDFATDVRLIFTN 376
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE K+ ++
Sbjct: 377 CYKYNPPDHDVVKMARKLQDVFEYKFAKM 405
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF ++ I +H++AWPF PVD L + DYYE+ ++PMDF TIK K++ D Y
Sbjct: 19 LQFLLKTVMRQIQRHQFAWPFAKPVDAVKLKIPDYYEITKRPMDFGTIKKKLEHND---Y 75
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
+E + +LVF N YN +D+ +MA+ +LEKF ++ L ++P
Sbjct: 76 TCAKECIEEFKLVFTNCYGYNKPGEDIVIMAE-VLEKFFDEKLSMMP 121
>gi|302564433|ref|NP_001181047.1| bromodomain-containing protein 3 [Macaca mulatta]
gi|355567354|gb|EHH23695.1| hypothetical protein EGK_07225 [Macaca mulatta]
gi|383421773|gb|AFH34100.1| bromodomain-containing protein 3 [Macaca mulatta]
gi|384949538|gb|AFI38374.1| bromodomain-containing protein 3 [Macaca mulatta]
gi|387542198|gb|AFJ71726.1| bromodomain-containing protein 3 [Macaca mulatta]
Length = 726
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMDG++ Y + + ADVRL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGRE---YPDAQGFAADVRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|262189359|gb|ACY30377.1| BRD2 [Salmo salar]
Length = 824
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I++PMD STIK KMD ++ YR+ ++ DVR+++ N
Sbjct: 400 YAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKMDSRE---YRDAQQFAGDVRIMYSN 456
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN DV MA+ L + FE
Sbjct: 457 CYKYNPPDHDVVTMARKLQDVFE 479
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF R + +H +AWPF PVD L L DY+++I++PMD TIK ++ + Y
Sbjct: 81 LQFLQRAMMKSLWRHHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIKRRL---ENNYY 137
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
R+ E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 138 RSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 182
>gi|390466206|ref|XP_003733541.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific
protein-like [Callithrix jacchus]
Length = 932
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 290 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQE---YKDAYEFAADVRLMFMN 346
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKW 132
KYN +V MA+ L + FE +
Sbjct: 347 CYKYNPPDHEVVTMARMLQDVFETHF 372
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 32 LQYLQKVILKDLWKHDFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENK---YY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L E F +K Q+
Sbjct: 89 VKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEELFMQKLSQM 133
>gi|297685659|ref|XP_002820401.1| PREDICTED: bromodomain-containing protein 3 [Pongo abelii]
Length = 726
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMDG++ Y + + ADVRL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGRE---YPDAQGFAADVRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|157126758|ref|XP_001654739.1| hypothetical protein AaeL_AAEL002090 [Aedes aegypti]
gi|108882525|gb|EAT46750.1| AAEL002090-PA, partial [Aedes aegypti]
Length = 506
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E ADVRL+F N
Sbjct: 340 YAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSANEFAADVRLIFTN 396
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN DV M + L + FE
Sbjct: 397 CYKYNPPDHDVVAMGRKLQDVFE 419
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
L F ++ + +H+++WPF PVD + L L DY+++I++PMD TIK ++ + Y
Sbjct: 17 LHFLLKTVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRL---ENNYY 73
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
+E D ++F N YN +DV VMA++L + F K + L+PK
Sbjct: 74 WTSKESIQDFNIMFSNCYVYNKPGEDVVVMAQALEKLFLTK-VSLMPK 120
>gi|297789895|ref|XP_002862870.1| hypothetical protein ARALYDRAFT_497270 [Arabidopsis lyrata subsp.
lyrata]
gi|297308629|gb|EFH39129.1| hypothetical protein ARALYDRAFT_497270 [Arabidopsis lyrata subsp.
lyrata]
Length = 547
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HKWAW F PVDV GLGLHDY++V++KPMD T+K + D Y + + DVR
Sbjct: 180 LMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNL---DKGFYVSPIDFATDVR 236
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFE 129
L F NAM YN + DV+ MA LL+ F+
Sbjct: 237 LTFNNAMTYNPKGQDVYFMADKLLDHFD 264
>gi|402896155|ref|XP_003911172.1| PREDICTED: bromodomain-containing protein 3 [Papio anubis]
Length = 726
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMDG++ Y + + ADVRL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGRE---YPDAQGFAADVRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|355752948|gb|EHH56994.1| hypothetical protein EGM_06545 [Macaca fascicularis]
Length = 726
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMDG++ Y + + ADVRL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGRE---YPDAQGFAADVRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|47086635|ref|NP_997867.1| bromodomain-containing protein 3 [Danio rerio]
gi|41944567|gb|AAH65949.1| Bromodomain containing 3b [Danio rerio]
Length = 664
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+E+I++PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 313 YAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSRE---YPDAQNFAADIRLMFSN 369
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE K+ ++
Sbjct: 370 CYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY++VI+ PMD TIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRL---ENNYY 91
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 92 WTAGECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 136
>gi|355745448|gb|EHH50073.1| hypothetical protein EGM_00839, partial [Macaca fascicularis]
Length = 957
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 302 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 358
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 359 CYKYNPPDHEVVTMARMLQDVFETHFSKIPVEPVESMPLCYIKTDITETTGRENTNEASS 418
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 419 EGNSSGDSEDERVQRLAKLQEQLKAVHQQLQVLSQVPFRK 458
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 43 LQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENK---YY 99
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 100 VKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFVQKLSQM 144
>gi|338797768|ref|NP_001229739.1| bromodomain testis-specific protein isoform d [Homo sapiens]
gi|119593515|gb|EAW73109.1| bromodomain, testis-specific, isoform CRA_b [Homo sapiens]
Length = 874
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY+V++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 218 YAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 274
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 275 CYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASS 334
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 335 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRK 374
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 73 MDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
MD +TIK +++ K Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 1 MDLNTIKKRLENK---YYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKL 57
Query: 133 LQL 135
Q+
Sbjct: 58 SQM 60
>gi|185134173|ref|NP_001117185.1| bromodomain containing 2 [Salmo salar]
gi|148362162|gb|ABQ59684.1| BRD2 [Salmo salar]
Length = 815
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I++PMD STIK KMD ++ YR+ ++ DVR+++ N
Sbjct: 396 YAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKMDSRE---YRDAQQFAGDVRIMYSN 452
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN DV MA+ L + FE
Sbjct: 453 CYKYNPPDHDVVAMARKLQDVFE 475
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF R ++ +H +AWPF PVD L L DY+++I++PMD TIK +++ Y
Sbjct: 81 LQFLQRAMMKYLWRHHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIKRRLENNY---Y 137
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
R+ E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 138 RSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 182
>gi|146147391|gb|ABQ01994.1| bromodomain containing 2 [Salmo salar]
gi|148362147|gb|ABQ59670.1| BRD2 [Salmo salar]
Length = 815
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I++PMD STIK KMD ++ YR+ ++ DVR+++ N
Sbjct: 396 YAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKMDSRE---YRDAQQFAGDVRIMYSN 452
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN DV MA+ L + FE
Sbjct: 453 CYKYNPPDHDVVAMARKLQDVFE 475
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF R ++ +H +AWPF PVD L L DY+++I++PMD TIK +++ Y
Sbjct: 81 LQFLQRAMMKYLWRHHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIKRRLENNY---Y 137
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
R+ E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 138 RSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 182
>gi|73959570|ref|XP_867048.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Canis
lupus familiaris]
Length = 668
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 291 YAWPFYNPVDVHALGLHNYYDIVKNPMDLGTIKGKMDNQE---YKDAYEFAADVRLMFMN 347
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE + ++
Sbjct: 348 CYKYNPPDHEVVTMARMLQDVFEMHFAKI 376
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 31 LQYLQKIVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLEHK---YY 87
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D ++F N YN DD+ +MA++L + F +K Q+
Sbjct: 88 VRASECIEDFNIMFSNCYLYNKPGDDIVLMAQALEKLFRQKLSQM 132
>gi|432910838|ref|XP_004078550.1| PREDICTED: bromodomain-containing protein 2-like [Oryzias latipes]
Length = 830
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD STIK KMD ++ YR+ ++ +DVRL+F N
Sbjct: 404 YAWPFYTPVDAAALGLHDYHDIIKCPMDLSTIKRKMDCRE---YRDAQQFASDVRLMFSN 460
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN DV MA+ L + FE
Sbjct: 461 CYKYNPPDHDVVGMARKLQDVFE 483
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD L L DYY++I++PMD TIK ++ + + Y
Sbjct: 89 LQYLQKTLMKCLWRHEFAWPFHEPVDAYRLKLPDYYKIIKQPMDMGTIKKRL---ENSFY 145
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
R+ E D +F N YN +DD+ +MA+SL + F +K Q+
Sbjct: 146 RSASECIQDFNTMFTNCYIYNKPKDDIVLMAQSLEKIFLQKVAQM 190
>gi|391337779|ref|XP_003743242.1| PREDICTED: bromodomain testis-specific protein-like [Metaseiulus
occidentalis]
Length = 802
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF VDVEGLGLHDYY++I +PMD TIK KM+ ++ YRN + D
Sbjct: 407 FAKKHSAYAWPFYTAVDVEGLGLHDYYDIITQPMDLGTIKTKMERRE---YRNPDDFCND 463
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRLVF N KYN +V MA+ L + FE K ++
Sbjct: 464 VRLVFMNCYKYNPADHEVVKMARKLQDVFEMKLTKM 499
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF ++ + +H +AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 72 LQFMLKHVMKAVWKHNFAWPFQQPVDTIKLNLPDYFKIIKVPMDLGTIKKRL---ENCYY 128
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ +E D ++F N YN +DV +MA+SL + F K ++
Sbjct: 129 YDAQECINDFNVLFSNCYIYNKPGEDVVLMAQSLEKLFLSKLAEM 173
>gi|296090258|emb|CBI40077.3| unnamed protein product [Vitis vinifera]
Length = 714
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 133/249 (53%), Gaps = 22/249 (8%)
Query: 27 SASLLQFFVRQARSFITQ---HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 83
+AS+L ++Q + + Q H+ W F PVD+ L + DY+ +I+ PMD TIK
Sbjct: 146 TASVL--LMKQCETLLKQLMSHQHGWVFNEPVDIVKLNIPDYFTIIKHPMDLGTIK---- 199
Query: 84 GKDGTG-YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE 142
GK +G Y + + ADVRL F NA +N +DVH MA +L + FE +W + K+
Sbjct: 200 GKIASGAYSSPLDFAADVRLTFSNAQTFNPPGNDVHKMADTLSKFFEVRWKTIEKKLPVT 259
Query: 143 EKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEK 202
+ + + +M+ T + + +K +++ S +EV ++E V QK M+ +EK
Sbjct: 260 KTQSLPGKYGTHGEMK-TAKPMPPSKKRKVTSTHHEV------IQEPV-QKV--MTADEK 309
Query: 203 KNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ--EVDLDMDAQSELTLWRLKVFVQES 260
+NLG L L E + ++ + ++ + T + E+++D++A S+ TL+ L+ + +
Sbjct: 310 RNLGRDLEDLLGEIPVQIIDFLRVHSSNGRETGEDDEIEVDIEALSDDTLFTLRKLLDDY 369
Query: 261 LKAASRSSG 269
L+ +S G
Sbjct: 370 LQEKQKSHG 378
>gi|148362124|gb|ABQ59651.1| BRD2 [Salmo salar]
gi|148362144|gb|ABQ59668.1| BRD2 [Salmo salar]
Length = 824
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I++PMD STIK KMD ++ YR+ ++ DVR+++ N
Sbjct: 400 YAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRKMDSRE---YRDAQQFAGDVRIMYSN 456
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN DV MA+ L + FE
Sbjct: 457 CYKYNPPDHDVVTMARKLQDVFE 479
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF R + +H +AWPF PVD L L DY+++I++PMD TIK ++ + Y
Sbjct: 81 LQFLQRAMMKSLWRHHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIKRRL---ENNYY 137
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
R+ E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 138 RSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 182
>gi|33355659|gb|AAQ16198.1| testis-specific BRDT protein [Homo sapiens]
Length = 960
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY+V++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 304 YAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 360
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 361 CYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASS 420
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 421 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRK 460
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 45 LQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENK---YY 101
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 102 AKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 146
>gi|221044398|dbj|BAH13876.1| unnamed protein product [Homo sapiens]
Length = 951
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY+V++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 295 YAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 351
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 352 CYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASS 411
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 412 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRK 451
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 32 LQYLQKVVLKNLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENK---YY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 89 AKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 133
>gi|425906067|sp|Q4R8Y1.3|BRDT_MACFA RecName: Full=Bromodomain testis-specific protein
Length = 947
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 291 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 347
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 348 CYKYNPPDHEVVTMARMLQDVFETHFSKIPVEPVESMPLCYIKTDITETTGRENTNEASS 407
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 408 EGNSSGDSEDERVQRLAKLQEQLKAVHQQLQVLSQVPFRK 447
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 32 LQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENK---YY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 89 VKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFVQKLSQM 133
>gi|403284014|ref|XP_003933383.1| PREDICTED: bromodomain testis-specific protein [Saimiri boliviensis
boliviensis]
Length = 1132
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 476 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQE---YKDAYEFAADVRLMFMN 532
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKW 132
KYN +V MA+ L + FE +
Sbjct: 533 CYKYNPPDHEVVTMARMLQDVFETHF 558
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H +WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 214 LQYLQKVILKDLWKHDLSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENK---YY 270
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L E F +K Q+
Sbjct: 271 VKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEELFMQKLSQM 315
>gi|119593512|gb|EAW73106.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593513|gb|EAW73107.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593514|gb|EAW73108.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593516|gb|EAW73110.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593517|gb|EAW73111.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|208965898|dbj|BAG72963.1| bromodomain, testis-specific [synthetic construct]
Length = 947
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY+V++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 291 YAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 347
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 348 CYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASS 407
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 408 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRK 447
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 32 LQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENK---YY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 89 AKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 133
>gi|338797757|ref|NP_001229735.1| bromodomain testis-specific protein isoform a [Homo sapiens]
Length = 951
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY+V++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 295 YAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 351
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 352 CYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASS 411
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 412 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRK 451
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 32 LQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENK---YY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 89 AKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 133
>gi|281349316|gb|EFB24900.1| hypothetical protein PANDA_009517 [Ailuropoda melanoleuca]
Length = 696
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMDG++ Y + + ADVRL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDGRE---YADAQGFAADVRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ-------LLPKVMEEE 143
+ E D +F N YN DD+ +MA++L + F +K Q LLP V + +
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPVPKGK 155
Query: 144 KRQ 146
R+
Sbjct: 156 GRK 158
>gi|261278848|pdb|3JVL|A Chain A, Crystal Structure Of Bromodomain 2 Of Mouse Brd4
gi|261278849|pdb|3JVM|A Chain A, Crystal Structure Of Bromodomain 2 Of Mouse Brd4
Length = 120
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 22 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGAD 78
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 79 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 114
>gi|46399198|ref|NP_001717.2| bromodomain testis-specific protein isoform b [Homo sapiens]
gi|46399200|ref|NP_997072.1| bromodomain testis-specific protein isoform b [Homo sapiens]
gi|338797755|ref|NP_001229734.1| bromodomain testis-specific protein isoform b [Homo sapiens]
Length = 947
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY+V++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 291 YAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 347
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 348 CYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASS 407
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 408 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRK 447
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 32 LQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENK---YY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 89 AKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 133
>gi|338797761|ref|NP_001229737.1| bromodomain testis-specific protein isoform c [Homo sapiens]
gi|338797763|ref|NP_001229736.1| bromodomain testis-specific protein isoform c [Homo sapiens]
Length = 901
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY+V++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 245 YAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 301
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 302 CYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASS 361
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 362 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRK 401
>gi|301770655|ref|XP_002920742.1| PREDICTED: bromodomain-containing protein 3-like [Ailuropoda
melanoleuca]
Length = 728
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMDG++ Y + + ADVRL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDGRE---YADAQGFAADVRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ-------LLPKVMEEE 143
+ E D +F N YN DD+ +MA++L + F +K Q LLP V + +
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPVPKGK 155
Query: 144 KRQ 146
R+
Sbjct: 156 GRK 158
>gi|297797597|ref|XP_002866683.1| hypothetical protein ARALYDRAFT_919899 [Arabidopsis lyrata subsp.
lyrata]
gi|297312518|gb|EFH42942.1| hypothetical protein ARALYDRAFT_919899 [Arabidopsis lyrata subsp.
lyrata]
Length = 577
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HKWAW F PVDV GLGLHDY++V++KPMD T+K + D Y + + DVR
Sbjct: 180 LMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNL---DKGFYVSPIDFATDVR 236
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFE 129
L F NAM YN + DV+ MA LL+ F+
Sbjct: 237 LTFNNAMTYNPKGQDVYFMADKLLDHFD 264
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
R M+ EEK LG L L PE L + ++I+ + N E++LD++A TLW L
Sbjct: 393 RLMTMEEKSKLGMNLQDLPPEKLGQLVQILRKRNGHLAQDGDEIELDIEAVDNETLWELD 452
Query: 255 VFVQESLKAASR 266
FV K AS+
Sbjct: 453 RFVTNYKKMASK 464
>gi|402855232|ref|XP_003892235.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Papio
anubis]
gi|402855234|ref|XP_003892236.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Papio
anubis]
gi|402855236|ref|XP_003892237.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Papio
anubis]
Length = 945
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 291 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 347
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 348 CYKYNPPDHEVVTMARMLQDVFETHFSKIPVEPVESMPLCYIKTDITETTGRENTNEASS 407
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 408 EGNSSGDSEDERVQRLAKLQEQLKAVHQQLQVLSQVPFRK 447
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 32 LQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENK---YY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 89 VKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 133
>gi|221044240|dbj|BAH13797.1| unnamed protein product [Homo sapiens]
Length = 901
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY+V++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 245 YAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 301
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 302 CYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASS 361
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 362 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRK 401
>gi|221046272|dbj|BAH14813.1| unnamed protein product [Homo sapiens]
Length = 901
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY+V++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 245 YAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 301
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 302 CYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASS 361
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 362 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRK 401
>gi|226694198|sp|Q58F21.4|BRDT_HUMAN RecName: Full=Bromodomain testis-specific protein; AltName:
Full=Cancer/testis antigen 9; Short=CT9; AltName:
Full=RING3-like protein
gi|108752098|gb|AAI11928.1| BRDT protein [synthetic construct]
gi|110645559|gb|AAI18499.1| BRDT protein [synthetic construct]
Length = 947
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY+V++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 291 YAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 347
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 348 CYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASS 407
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 408 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRK 447
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 32 LQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENK---YY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 89 AKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 133
>gi|403301507|ref|XP_003941429.1| PREDICTED: bromodomain-containing protein 3 [Saimiri boliviensis
boliviensis]
Length = 726
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMDG++ Y + + ADVRL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGRE---YPDAQGFAADVRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ-------LLPKVMEEE 143
+ E D +F N YN DD+ +MA++L + F +K Q LLP V + +
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPVPKGK 155
Query: 144 KRQEEEEAKAQLDMQLT 160
R+ A++ Q+
Sbjct: 156 GRKPAAGAQSTGTQQVA 172
>gi|355558166|gb|EHH14946.1| hypothetical protein EGK_00962, partial [Macaca mulatta]
Length = 897
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 298 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 354
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 355 CYKYNPPDHEVVTMARMLQDVFETHFSKIPVEPVESMPLCYIKTDITETTGRENTNEASS 414
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 415 EGNSSGDSEDERVQRLAKLQEQLKAVHQQLQVLSQVPFRK 454
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 39 LQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENK---YY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 VKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 140
>gi|402855238|ref|XP_003892238.1| PREDICTED: bromodomain testis-specific protein isoform 4 [Papio
anubis]
gi|402855240|ref|XP_003892239.1| PREDICTED: bromodomain testis-specific protein isoform 5 [Papio
anubis]
Length = 899
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 245 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 301
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 302 CYKYNPPDHEVVTMARMLQDVFETHFSKIPVEPVESMPLCYIKTDITETTGRENTNEASS 361
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 362 EGNSSGDSEDERVQRLAKLQEQLKAVHQQLQVLSQVPFRK 401
>gi|410903440|ref|XP_003965201.1| PREDICTED: bromodomain-containing protein 2-like [Takifugu
rubripes]
Length = 546
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 110/252 (43%), Gaps = 46/252 (18%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD L L+DY+++I+ PMD ST+K K+D + Y N ADV+L+F N
Sbjct: 264 YAWPFYEPVDAVALQLNDYHDIIKHPMDLSTVKRKLDRGE---YPNADSFAADVQLIFSN 320
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQT 166
KYN +V AK L FE+ + K+ +E + + A LT+E
Sbjct: 321 CYKYNPSHLEVVAHAKKLQGVFEKSFA----KIPDEPTGTGQAQTAAFGKSDLTEEGA-- 374
Query: 167 NKAKELRSELNEVDMQLENLRETVI----------------------------------- 191
+ EL+ ++ V L + E +
Sbjct: 375 TRLAELQEQVKAVPDHLAAISEVPVNKRKRKDDESKTDRQTRGSPTSDPGSPCKLKTWDP 434
Query: 192 -QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHAT-AQEVDLDMDAQSELT 249
KC ++ EEK L + RL + L + ++I+ PS T E+++D + T
Sbjct: 435 DNKCLPLTYEEKHQLSLDINRLPGKKLGRVVQIIQTLEPSMCETNPDEIEIDFEVLKPST 494
Query: 250 LWRLKVFVQESL 261
L RL+ +V++ L
Sbjct: 495 LRRLQQYVKKCL 506
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H +AWPF PVD GLGL DY+++I PMD TIK ++ + Y
Sbjct: 32 LQYMQNIVVKSLWRHHYAWPFYEPVDAVGLGLADYHKIITSPMDLGTIKKRL---ENNYY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA +L + F +K Q+
Sbjct: 89 WTASECLQDFNTMFTNCYIYNKPTDDIVLMALTLEKIFLQKVAQM 133
>gi|42568797|ref|NP_201366.3| global transcription factor group E7 [Arabidopsis thaliana]
gi|75146221|sp|Q7Y214.1|GTE7_ARATH RecName: Full=Transcription factor GTE7; AltName:
Full=Bromodomain-containing protein GTE7; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E7
gi|30793995|gb|AAP40447.1| unknown protein [Arabidopsis thaliana]
gi|110742049|dbj|BAE98957.1| hypothetical protein [Arabidopsis thaliana]
gi|133778882|gb|ABO38781.1| At5g65630 [Arabidopsis thaliana]
gi|332010696|gb|AED98079.1| global transcription factor group E7 [Arabidopsis thaliana]
Length = 590
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 65/113 (57%), Gaps = 12/113 (10%)
Query: 17 KLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFS 76
KLL G S L++ + +HKWAW F PVDV GLGLHDY++V++KPMD
Sbjct: 164 KLLAGMLNTCSQILVK---------LMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLG 214
Query: 77 TIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 129
T+K + D Y + + DVRL F NAM YN + DV+ MA LL+ F+
Sbjct: 215 TVKLNL---DKGFYVSPIDFATDVRLTFDNAMTYNPKGQDVYFMADKLLDHFD 264
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
R M+ EEK LG L L PE L + L+I+ + N E++LD++A TLW L
Sbjct: 402 RLMTMEEKSKLGMNLQDLPPEKLGQLLQILRKRNGHLAQDGDEIELDIEAVDNETLWELD 461
Query: 255 VFVQESLKAASR 266
FV K AS+
Sbjct: 462 RFVTNYKKMASK 473
>gi|8978291|dbj|BAA98182.1| unnamed protein product [Arabidopsis thaliana]
Length = 643
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 65/113 (57%), Gaps = 12/113 (10%)
Query: 17 KLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFS 76
KLL G S L++ + +HKWAW F PVDV GLGLHDY++V++KPMD
Sbjct: 219 KLLAGMLNTCSQILVK---------LMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLG 269
Query: 77 TIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 129
T+K + D Y + + DVRL F NAM YN + DV+ MA LL+ F+
Sbjct: 270 TVKLNL---DKGFYVSPIDFATDVRLTFDNAMTYNPKGQDVYFMADKLLDHFD 319
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
R M+ EEK LG L L PE L + L+I+ + N E++LD++A TLW L
Sbjct: 457 RLMTMEEKSKLGMNLQDLPPEKLGQLLQILRKRNGHLAQDGDEIELDIEAVDNETLWELD 516
Query: 255 VFVQESLKAASR 266
FV K AS+
Sbjct: 517 RFVTNYKKMASK 528
>gi|395730261|ref|XP_002810633.2| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific protein
[Pongo abelii]
Length = 1038
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 362 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 418
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 419 CYKYNPPDHEVVTMARMLQDVFETHFSKIPVEPVESMPLCYIKTDITETTGRENTNEASS 478
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 479 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRK 518
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 104 LQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENK---YY 160
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 161 AKASECIEDFNTMFSNCYLYNKPGDDIVLMAQTLEKLFMQKLSQM 205
>gi|431897072|gb|ELK06336.1| Bromodomain testis-specific protein, partial [Pteropus alecto]
Length = 931
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 298 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKRKMDNQE---YKDAYEFAADVRLMFVN 354
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN +V MA+ L + FE
Sbjct: 355 CYKYNPPDHEVVAMARMLQDVFE 377
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+KPMD STIK +++ K Y
Sbjct: 38 LQYLQKVVLKALWKHSFSWPFQQPVDAMKLKLPDYYTIIKKPMDLSTIKKRLEHK---YY 94
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D ++F N YN DD+ +MA++L + F +K Q+
Sbjct: 95 VQASECIEDFNMMFSNCYLYNKTGDDIVLMAQALEKLFRQKLSQM 139
>gi|390352956|ref|XP_003728006.1| PREDICTED: bromodomain-containing protein 2-like, partial
[Strongylocentrotus purpuratus]
Length = 568
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD + GLHDY+E+I+ PMD TIK K++ +D Y+N + ADVRL+F+N
Sbjct: 440 YAWPFFKPVDADVFGLHDYHEIIKTPMDMGTIKVKLENRD---YKNANDFAADVRLIFRN 496
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +DV MA+ L FE K+ ++
Sbjct: 497 CYKYNPRDNDVVKMARKLENVFEVKFAKI 525
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF HPVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 202 LQYLQKVVLKALWKHQFAWPFHHPVDPTKLALPDYYKIIKTPMDLGTIKKRL---ESIYY 258
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ +E +D +LVF N ++ +DV +MA++L + F K Q+
Sbjct: 259 HSAKECISDFKLVFTNCYLHDKPGEDVVLMAQALEKLFLTKVAQM 303
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 64 DYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKS 123
DY ++I+ PMD TIK +++ Y + +E +D LVF N +N +DV MA++
Sbjct: 1 DYLKIIKTPMDLGTIKKRLES---IYYHSAKECISDFNLVFTNCYLHNKPGEDVVFMAQA 57
Query: 124 LLEKFEEKWLQL 135
L + F K Q+
Sbjct: 58 LEKLFLTKVAQM 69
>gi|156230233|gb|AAI51887.1| Brd3b protein [Danio rerio]
Length = 500
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+E+I++PMD ST+K KMD ++ Y + + ADVRL+F N
Sbjct: 313 YAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSRE---YPDAQNFAADVRLMFSN 369
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE K+ ++
Sbjct: 370 CYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY++VI+ PMD TIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRL---ENNYY 91
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 92 WTAGECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 136
>gi|7573452|emb|CAB87766.1| kinase-like protein [Arabidopsis thaliana]
Length = 703
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 109/223 (48%), Gaps = 17/223 (7%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H++ W F PVDV L + DY+ VIE PMD T+KNK+ GT Y E ADVR
Sbjct: 148 LMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKL--TSGT-YSCPSEFAADVR 204
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L F NAM YN +DV+VMA +L + FE +W L K+ + E A + +
Sbjct: 205 LTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKLSGTKVHTEPSNLDAHKEKHIVI 264
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKK-NLGTALTRLSPEDLCKA 220
K K VD E V+ +++ T+E + LG L L+ E +
Sbjct: 265 PVPMAKKRK-----TTAVDC------ENVVDPAKRVMTDEDRLKLGKDLESLT-EFPAQL 312
Query: 221 LEIVAENNPSFHATA-QEVDLDMDAQSELTLWRLKVFVQESLK 262
+ + ++N + E+++D++ S+ L++L+ + E L+
Sbjct: 313 INFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLRDLLDEHLR 355
>gi|2554915|gb|AAB87862.1| BRDT [Homo sapiens]
Length = 947
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY+V++ PMD TIK KMD ++ Y++ ADVRL+F N
Sbjct: 291 YAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQE---YKDAYSFAADVRLMFMN 347
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 348 CYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASS 407
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 408 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRK 447
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 32 LQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENK---YY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 89 AKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 133
>gi|440906896|gb|ELR57110.1| Bromodomain testis-specific protein [Bos grunniens mutus]
Length = 964
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 290 YAWPFYNPVDVNALGLHNYYDIVKTPMDLGTIKAKMDNQE---YKDAYEFAADVRLMFMN 346
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN +V MA+ L + FE
Sbjct: 347 CYKYNPPDHEVVTMARMLQDVFE 369
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 31 LQYLQKVVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKNPMDLNTIKKRLEHK---YY 87
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 88 VKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFRQKLSQM 132
>gi|116283260|gb|AAH05281.1| BRDT protein [Homo sapiens]
Length = 465
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY+V++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 291 YAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 347
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 348 CYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASS 407
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 408 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRK 447
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ MD +TIK +++ K Y
Sbjct: 32 LQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNSMDLNTIKKRLENK---YY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 89 AKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 133
>gi|410033225|ref|XP_003949509.1| PREDICTED: bromodomain testis-specific protein [Pan troglodytes]
Length = 797
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 218 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 274
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 275 CYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASS 334
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 335 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRK 374
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 73 MDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
MD +TIK +++ K Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 1 MDLNTIKKRLENK---YYMKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKL 57
Query: 133 LQL 135
Q+
Sbjct: 58 SQM 60
>gi|18417335|ref|NP_568297.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
gi|75163656|sp|Q93YS6.1|GTE9_ARATH RecName: Full=Transcription factor GTE9; AltName: Full=BROMODOMAIN
AND EXTRATERMINAL DOMAIN PROTEIN 9; Short=AtBET9;
AltName: Full=Bromodomain-containing protein GTE9;
AltName: Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP
E9
gi|16604681|gb|AAL24133.1| putative kinase [Arabidopsis thaliana]
gi|332004627|gb|AED92010.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
Length = 688
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 109/223 (48%), Gaps = 17/223 (7%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H++ W F PVDV L + DY+ VIE PMD T+KNK+ GT Y E ADVR
Sbjct: 148 LMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKL--TSGT-YSCPSEFAADVR 204
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L F NAM YN +DV+VMA +L + FE +W L K+ + E A + +
Sbjct: 205 LTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKLSGTKVHTEPSNLDAHKEKHIVI 264
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKK-NLGTALTRLSPEDLCKA 220
K K VD E V+ +++ T+E + LG L L+ E +
Sbjct: 265 PVPMAKKRK-----TTAVDC------ENVVDPAKRVMTDEDRLKLGKDLESLT-EFPAQL 312
Query: 221 LEIVAENNPSFHATA-QEVDLDMDAQSELTLWRLKVFVQESLK 262
+ + ++N + E+++D++ S+ L++L+ + E L+
Sbjct: 313 INFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLRDLLDEHLR 355
>gi|21594670|gb|AAH32124.1| BRD3 protein [Homo sapiens]
gi|119608520|gb|EAW88114.1| bromodomain containing 3, isoform CRA_b [Homo sapiens]
Length = 556
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMDG++ Y + + ADVRL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGRE---YPDAQGFAADVRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|334187679|ref|NP_001190308.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
gi|332004628|gb|AED92011.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
Length = 689
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 109/223 (48%), Gaps = 17/223 (7%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H++ W F PVDV L + DY+ VIE PMD T+KNK+ GT Y E ADVR
Sbjct: 148 LMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKL--TSGT-YSCPSEFAADVR 204
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L F NAM YN +DV+VMA +L + FE +W L K+ + E A + +
Sbjct: 205 LTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKLSGTKVHTEPSNLDAHKEKHIVI 264
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKK-NLGTALTRLSPEDLCKA 220
K K VD E V+ +++ T+E + LG L L+ E +
Sbjct: 265 PVPMAKKRK-----TTAVDC------ENVVDPAKRVMTDEDRLKLGKDLESLT-EFPAQL 312
Query: 221 LEIVAENNPSFHATA-QEVDLDMDAQSELTLWRLKVFVQESLK 262
+ + ++N + E+++D++ S+ L++L+ + E L+
Sbjct: 313 INFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLRDLLDEHLR 355
>gi|426218805|ref|XP_004003627.1| PREDICTED: bromodomain testis-specific protein [Ovis aries]
Length = 969
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 325 YAWPFYNPVDVNALGLHNYYDIVKTPMDLGTIKAKMDNQE---YKDAYEFAADVRLMFMN 381
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN +V MA+ L + FE
Sbjct: 382 CYKYNPPDHEVVTMARMLQDVFE 404
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 66 LQYLQKVVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKNPMDLNTIKKRLEHK---YY 122
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 123 VKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFRQKLSQM 167
>gi|426330336|ref|XP_004026173.1| PREDICTED: bromodomain testis-specific protein [Gorilla gorilla
gorilla]
Length = 883
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVD+ LGLH+YY++++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 228 YAWPFYNPVDINALGLHNYYDIVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 284
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 285 CYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASS 344
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 345 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRK 384
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 64 DYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKS 123
DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA++
Sbjct: 2 DYYTIIKNPMDLNTIKKRLENK---YYGKASECIEDFNTMFSNCYLYNKPGDDIVLMAQA 58
Query: 124 LLEKFEEKWLQL 135
L + F +K Q+
Sbjct: 59 LEKLFMQKLSQM 70
>gi|397473963|ref|XP_003808463.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Pan
paniscus]
gi|397473965|ref|XP_003808464.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Pan
paniscus]
gi|397473967|ref|XP_003808465.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Pan
paniscus]
Length = 947
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 291 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 347
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 348 CYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASS 407
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 408 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRK 447
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 32 LQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENK---YY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 89 VKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 133
>gi|397473969|ref|XP_003808466.1| PREDICTED: bromodomain testis-specific protein isoform 4 [Pan
paniscus]
gi|397473971|ref|XP_003808467.1| PREDICTED: bromodomain testis-specific protein isoform 5 [Pan
paniscus]
Length = 901
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 245 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 301
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 302 CYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASS 361
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 362 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRK 401
>gi|20302741|gb|AAM18869.1|AF391288_5 unknown [Branchiostoma floridae]
Length = 664
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD + LGLHDY+E+I+ PMD T+K KMD ++ Y++ +E +D
Sbjct: 373 FAKKHAAYAWPFYEPVDADLLGLHDYHEIIKHPMDLGTVKKKMDTRE---YKSAQEFASD 429
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+R++F N +YN DV MA+ L + FE K+ ++
Sbjct: 430 MRMIFSNCYRYNPPEHDVVQMARKLQDVFEMKYAKM 465
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 67/117 (57%), Gaps = 3/117 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H +AWPF PVD L + DY ++I+ PMD TIK ++ + Y
Sbjct: 41 LQYLLKVVMKAVWKHNFAWPFHEPVDWVKLNIPDYPKIIKTPMDLGTIKKRL---ETNYY 97
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQE 147
+ +E D L+F N YN +DV++MA++L + F +K Q+ P+ +E +Q+
Sbjct: 98 YSAKECIQDFNLMFTNCYVYNKPGEDVYLMAQTLEKLFLQKVAQMPPEEVEVASQQK 154
>gi|33416361|gb|AAH55533.1| Brd3b protein [Danio rerio]
Length = 499
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+E+I++PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 313 YAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSRE---YPDAQNFAADIRLMFSN 369
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE K+ ++
Sbjct: 370 CYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY++VI+ PMD TIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRL---ENNYY 91
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 92 WTAGECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 136
>gi|343962325|dbj|BAK62750.1| bromodomain testis-specific protein [Pan troglodytes]
Length = 947
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 291 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 347
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 348 CYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASS 407
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 408 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRK 447
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 32 LQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENK---YY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 89 MKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 133
>gi|332809502|ref|XP_524767.3| PREDICTED: bromodomain testis-specific protein isoform 4 [Pan
troglodytes]
gi|332809504|ref|XP_003308258.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Pan
troglodytes]
gi|410033223|ref|XP_003949508.1| PREDICTED: bromodomain testis-specific protein [Pan troglodytes]
Length = 870
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 291 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 347
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 348 CYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASS 407
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 408 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRK 447
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 32 LQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENK---YY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 89 MKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 133
>gi|332809506|ref|XP_003339041.1| PREDICTED: bromodomain testis-specific protein [Pan troglodytes]
gi|332809508|ref|XP_003308259.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Pan
troglodytes]
Length = 824
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 245 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 301
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 302 CYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASS 361
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 362 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRK 401
>gi|297807455|ref|XP_002871611.1| ATBET9 [Arabidopsis lyrata subsp. lyrata]
gi|297317448|gb|EFH47870.1| ATBET9 [Arabidopsis lyrata subsp. lyrata]
Length = 690
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 110/222 (49%), Gaps = 15/222 (6%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H++ W F PVDV L + DY+ VI+ PMD T+KNK+ GT Y E ADVR
Sbjct: 148 LMSHQYGWVFNTPVDVVKLNILDYFNVIKHPMDLGTVKNKL--TSGT-YSCPSEFAADVR 204
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L F NAM YN +DV VMA +L + FE +W L K+ + E + A + +
Sbjct: 205 LTFSNAMTYNPPGNDVFVMADTLRKFFEVRWKTLEKKLSGIKVHTEPSNSDAHEEKHIVI 264
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKAL 221
K K + VD EN+ E V R M+ E++ LG L L+ E + +
Sbjct: 265 PVPMAKKRK-----TSAVD--CENVSEPVK---RVMTDEDRLKLGKDLESLT-EFPAQLI 313
Query: 222 EIVAENNPSFHATA-QEVDLDMDAQSELTLWRLKVFVQESLK 262
+ ++N + E+++D++ S L++L+ + E L+
Sbjct: 314 NFLRDHNSNEGGIGDDEIEIDINDLSHHALFQLRDLLDEHLR 355
>gi|156356469|ref|XP_001623945.1| predicted protein [Nematostella vectensis]
gi|156210690|gb|EDO31845.1| predicted protein [Nematostella vectensis]
Length = 467
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 19/181 (10%)
Query: 16 KKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDF 75
KK L K S L F ++ + +AWPF PVD E LGLHDY+++I++PMD
Sbjct: 280 KKPLTEQLKYCSTILKDMFSKK------HYAYAWPFYKPVDAEALGLHDYHDIIKQPMDM 333
Query: 76 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ IKNK++ + Y + E AD+RL+F N +YN DV MA+ L + FE K+ ++
Sbjct: 334 TEIKNKLENR---AYDSPSEFAADIRLMFSNCYRYNPPDHDVVKMARQLQDVFEMKFAKM 390
Query: 136 LPKVM----------EEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLEN 185
+ + E + +++E + + + EA + K +L+ +L V QL
Sbjct: 391 PEETIIAPPSPPPAQPEVEPEQQESSDEETSVSNDSEAERAEKLSQLQQQLISVHEQLSK 450
Query: 186 L 186
L
Sbjct: 451 L 451
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 20 EGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 79
+ K + + LQF ++ + +H AWPF PVD L L DY+ +I+KPMD TIK
Sbjct: 8 QPAPKTRTTNQLQFLLKTVLKGLWRHHHAWPFREPVDAVKLNLPDYHTIIKKPMDLGTIK 67
Query: 80 NKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
K++ + Y +E D RL+ N YN DD+ +M +S+ + F +K + P
Sbjct: 68 KKLENNE---YPCAQECIEDFRLMINNCYTYNKPGDDIVLMCQSMDKLFHQKIAMMPP 122
>gi|156914867|gb|AAI52645.1| Brd3b protein [Danio rerio]
gi|163916192|gb|AAI57602.1| LOC100135304 protein [Xenopus (Silurana) tropicalis]
Length = 483
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+E+I++PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 313 YAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSRE---YPDAQNFAADIRLMFSN 369
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE K+ ++
Sbjct: 370 CYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY++VI+ PMD TIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRL---ENNYY 91
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 92 WTAGECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 136
>gi|302834497|ref|XP_002948811.1| hypothetical protein VOLCADRAFT_104017 [Volvox carteri f.
nagariensis]
gi|300266002|gb|EFJ50191.1| hypothetical protein VOLCADRAFT_104017 [Volvox carteri f.
nagariensis]
Length = 767
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 117/251 (46%), Gaps = 27/251 (10%)
Query: 41 FITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 100
F+ + K A F+ PVD G+ DY++ I PMD TIK ++ + Y + RE ADV
Sbjct: 107 FLMKKKNAIVFLRPVDPVKDGVPDYFKFICHPMDLGTIKTRLRERK---YSDPREFAADV 163
Query: 101 RLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLT 160
RLV++N YN V +M L E +E KW +L + + + LD ++
Sbjct: 164 RLVWRNCATYNAVGTPVRIMGDQLSEDWERKWAELNVEQRWDALVATRDPQTIPLDQRI- 222
Query: 161 QEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKA 220
+ A++L +N V + + R M+T EK+ L AL+ L L
Sbjct: 223 -----ASSARQLLQRVNSVHVLPD------ADPSRTMTTVEKRKLSIALSELQGNQLADV 271
Query: 221 LEIVAEN----NPSFHATAQEVDLDMDAQSELTLWRLKVFV-----QESLKAASRSSGDM 271
L I+AEN NP +E++LD+D TLWRL+ + + S K + S
Sbjct: 272 LNIIAENLKDINPDDE---EEIELDVDQLDNQTLWRLREYCDNANNKHSAKPTAPSKAGG 328
Query: 272 GGNNNNNNDDN 282
GG + + +D+
Sbjct: 329 GGASRSVHDNG 339
>gi|291230216|ref|XP_002735064.1| PREDICTED: bromodomain-containing protein 4-like, partial
[Saccoglossus kowalevskii]
Length = 597
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD T+K K++ +D Y N +I ADVR +F N
Sbjct: 169 YAWPFYKPVDANLLGLHDYHDIIKYPMDLGTVKRKLETRD---YTNANDIAADVRAIFTN 225
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE K+ ++
Sbjct: 226 CYKYNPPDHDVVAMARKLQDVFEMKFAKM 254
>gi|80971731|gb|ABB52829.1| BRD2 [Oncorhynchus mykiss]
Length = 812
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD S IK +MD ++ YR+ ++ ADVRL+F N
Sbjct: 369 YAWPFYKPVDASALGLHDYHDIIKCPMDLSNIKRRMDSRE---YRDSQQFSADVRLMFSN 425
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 426 CYKYNPPDHDVVGMARKLQDVFEFRFAKM 454
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H +AWPF PVD L L DY+++I++PMD TIK +++ Y
Sbjct: 53 LQFLQKAMIKSLWRHHFAWPFHEPVDAFRLNLPDYHKIIKQPMDMGTIKKRLENNY---Y 109
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
R+ E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 110 RSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKVFLQKVAQM 154
>gi|62020593|gb|AAH17582.1| BRDT protein, partial [Homo sapiens]
Length = 462
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY+V++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 291 YAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 347
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 348 CYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASS 407
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ E + + +L+ +L V QL+ L + +K
Sbjct: 408 EGKSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRK 447
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 32 LQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENK---YY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 89 AKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 133
>gi|354480438|ref|XP_003502414.1| PREDICTED: bromodomain testis-specific protein-like [Cricetulus
griseus]
Length = 839
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVD + LGLH+YY++++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 290 YAWPFYNPVDADALGLHNYYDIVKNPMDLGTIKGKMDNQE---YKDAYEFAADVRLMFMN 346
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN +V MA+ L + FE
Sbjct: 347 CYKYNPPDHEVVSMARMLQDVFE 369
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 31 LQFLQKVVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENK---YY 87
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEK 144
E D +F N YN DD+ +MA++L E+ +LQ L ++ +EE+
Sbjct: 88 VKASECIEDFNTMFSNCYLYNKPGDDIVLMAQAL----EKLFLQKLSQMPQEEQ 137
>gi|148235897|ref|NP_001090595.1| bromodomain containing 3 [Xenopus laevis]
gi|120537384|gb|AAI29055.1| LOC100036838 protein [Xenopus laevis]
Length = 783
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD S++K KMDG++ Y + + AD+RL+F N
Sbjct: 371 YAWPFYKPVDAEALELHDYHDIIKNPMDLSSVKRKMDGRE---YADAQAFAADIRLMFSN 427
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 428 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 456
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDCVKLSLPDYHKIIKNPMDMGTIKKRL---ESNYY 91
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ-------LLPKVMEEE 143
+ E D +F N YN DD+ +MA++L + F +K Q LLP V + +
Sbjct: 92 WSANECMQDFNTMFTNCYIYNKSTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPVPKGK 151
Query: 144 KRQ 146
R+
Sbjct: 152 GRK 154
>gi|380792435|gb|AFE68093.1| bromodomain-containing protein 3, partial [Macaca mulatta]
Length = 508
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMDG++ Y + + ADVRL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGRE---YPDAQGFAADVRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|254566451|ref|XP_002490336.1| Protein involved in transcription initiation at TATA-containing
promoters [Komagataella pastoris GS115]
gi|238030132|emb|CAY68055.1| Protein involved in transcription initiation at TATA-containing
promoters [Komagataella pastoris GS115]
gi|328350730|emb|CCA37130.1| Bromodomain-containing factor 1 [Komagataella pastoris CBS 7435]
Length = 640
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 32/256 (12%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+++PF+ PVD L Y++++++PMD TI+ K+ + Y N + +VRLVF N
Sbjct: 312 YSFPFLQPVDPVALDCPTYFDIVKEPMDLGTIQAKLANSE---YENADQFEREVRLVFTN 368
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQ-----LLPKVMEEEKRQEEEEAKAQLDMQ-LT 160
K+N E V+VM ++ F ++W + P+V+ + + E+E ++D LT
Sbjct: 369 CYKFNPEGSPVNVMGHTMENVFNKEWEKKPAPAPSPQVLSDYDSEAEDEGDIEIDESLLT 428
Query: 161 QEAVQT--NKAKELRSELNEVDMQLENLRETV----------------IQKCRKMSTEEK 202
A++ + + +R+++ ++ QL + +V I ++ E K
Sbjct: 429 NPAIEYLETQIERMRADVEKMKRQLYDEVMSVAIKNRKKSKRSKKKSSISYPTHITYEMK 488
Query: 203 KNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLKVFVQESL 261
K L + LS L K + I+ E P + Q E++LD+D TL +L FV +
Sbjct: 489 KELSEKINYLSETKLAKVISIIQETLPELQKSGQEEIELDIDQLDSATLLKLYNFVVKKE 548
Query: 262 KAASRSSGDMGGNNNN 277
KA S D G N N
Sbjct: 549 KAFS----DSGSNTKN 560
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
I + K A PF+ PVD E LG+ YY I++PMD STI+ K+ + Y + I D
Sbjct: 143 IKRLKDAKPFLLPVDTEKLGIPLYYNYIKRPMDLSTIERKI---SVSAYESPDIIVEDFN 199
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
L+ N K+N E + MAK++ FE+ L + PK
Sbjct: 200 LMVDNCRKFNGEDTPITRMAKNIQASFEKHMLNMPPK 236
>gi|441637323|ref|XP_004090057.1| PREDICTED: bromodomain testis-specific protein [Nomascus
leucogenys]
Length = 872
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y + + ADVRL+F N
Sbjct: 218 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQE---YEDAYKFAADVRLMFMN 274
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE + ++
Sbjct: 275 CYKYNPPDHEVVTMARMLQDVFETHFSKI 303
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 73 MDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
MD +TIK +++ K Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 1 MDLNTIKKRLENK---YYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKL 57
Query: 133 LQL 135
Q+
Sbjct: 58 SQM 60
>gi|28839607|gb|AAH47900.1| BRDT protein, partial [Homo sapiens]
Length = 463
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 84/156 (53%), Gaps = 16/156 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY+V++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 291 YAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 347
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 348 CYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASS 407
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRET 189
+ + E + + +L+ +L V QL+ L +
Sbjct: 408 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQV 443
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 32 LQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENK---YY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 89 AKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 133
>gi|344251852|gb|EGW07956.1| Bromodomain testis-specific protein [Cricetulus griseus]
Length = 565
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVD + LGLH+YY++++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 9 YAWPFYNPVDADALGLHNYYDIVKNPMDLGTIKGKMDNQE---YKDAYEFAADVRLMFMN 65
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE + ++
Sbjct: 66 CYKYNPPDHEVVSMARMLQDVFEMHFAKI 94
>gi|224136059|ref|XP_002322229.1| global transcription factor group [Populus trichocarpa]
gi|222869225|gb|EEF06356.1| global transcription factor group [Populus trichocarpa]
Length = 709
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 111/223 (49%), Gaps = 23/223 (10%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H++ W F PVDV L + DY+ +I+ PMD T+K+K+ + Y + ADVR
Sbjct: 176 LMAHQFGWIFKTPVDVVKLNIPDYFTIIKHPMDLGTVKSKIVSGE---YSSPLGFAADVR 232
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL---LPKVMEEEKRQE------EEEAK 152
L F NAMKYN +DVH MA++L + FE +W + LP E E E
Sbjct: 233 LTFSNAMKYNPPGNDVHSMAETLRKYFEVRWKVIEKKLPVTTGVESMPSRIDVHIERETT 292
Query: 153 AQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRL 212
++ + T A K K S+ N+V + E +R R MS EK+ L L L
Sbjct: 293 VHIERETTTSAPPLKKKKITPSD-NKV--KPEPVR-------RVMSNAEKQKLSMELEAL 342
Query: 213 SPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLK 254
E +E + E++ + T + E+++D+DA + TL+ L+
Sbjct: 343 LGELPESIIEFLKEHSGNAGQTGEDEIEIDIDALGDDTLFNLR 385
>gi|183396808|ref|NP_001116861.1| bromodomain containing 3a [Danio rerio]
Length = 683
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y++ + ADVRL+F N
Sbjct: 314 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YQDAQTFAADVRLMFSN 370
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 371 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 399
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD LGL DY+++I+ PMD TIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDAVKLGLPDYHKIIKNPMDMGTIKKRL---ESVYY 91
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
+ E D +F N YN DD+ +MA++L + F +K + L+P+
Sbjct: 92 YSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQK-VALMPQ 138
>gi|356560521|ref|XP_003548540.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 740
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 114/223 (51%), Gaps = 18/223 (8%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H++ W F PVDV L L DY+ +I+ PMD T+K+K+ + Y E DVR
Sbjct: 188 LMSHQYGWVFKTPVDVVKLKLPDYFSIIKHPMDLGTVKSKIAAGE---YAGPIEFADDVR 244
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE-KRQEEEEAKAQLDMQLT 160
L F NAM YN +DVHVMA +L + FE +W K +E++ R+++ ++ D +
Sbjct: 245 LTFSNAMIYNPRGNDVHVMADTLSKYFELRW-----KAIEKKLPRRDDVPFPSKPDTYVI 299
Query: 161 QEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK-MSTEEKKNLGTALTRLSPEDLCK 219
+ +K + +++ + Q V+ +K MS +EK NLG L L E
Sbjct: 300 KTTRPMPPSK--KRKISTLPCQ-----PVVMPPAKKVMSDQEKHNLGIELESLLGEMPMH 352
Query: 220 ALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLKVFVQESL 261
++ + EN + + E+++D+D + TL+ L+ + + L
Sbjct: 353 IIDFLKENCSNGEECGEDELEIDIDDLKDDTLFALRKLLDDFL 395
>gi|38541875|gb|AAH62700.1| BRDT protein, partial [Homo sapiens]
Length = 464
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 84/156 (53%), Gaps = 16/156 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY+V++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 291 YAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 347
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 348 CYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASS 407
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRET 189
+ + E + + +L+ +L V QL+ L +
Sbjct: 408 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQV 443
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TI +++ K Y
Sbjct: 32 LQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIIKRLENK---YY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 89 AKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 133
>gi|354501565|ref|XP_003512861.1| PREDICTED: bromodomain-containing protein 3 isoform 2 [Cricetulus
griseus]
Length = 744
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSRE---YPDAQGFAADIRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
KYN +V MA+ L + FE ++ ++ + ME
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPME 421
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|332221880|ref|XP_003260091.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Nomascus
leucogenys]
gi|441637320|ref|XP_004090056.1| PREDICTED: bromodomain testis-specific protein [Nomascus
leucogenys]
Length = 899
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y + + ADVRL+F N
Sbjct: 245 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQE---YEDAYKFAADVRLMFMN 301
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE + ++
Sbjct: 302 CYKYNPPDHEVVTMARMLQDVFETHFSKI 330
>gi|354501563|ref|XP_003512860.1| PREDICTED: bromodomain-containing protein 3 isoform 1 [Cricetulus
griseus]
gi|344252302|gb|EGW08406.1| Bromodomain-containing protein 3 [Cricetulus griseus]
Length = 727
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSRE---YPDAQGFAADIRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
KYN +V MA+ L + FE ++ ++ + ME
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPME 421
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|165972335|ref|NP_001107046.1| bromodomain-containing protein 3 isoform 1 [Mus musculus]
gi|62485072|dbj|BAD91008.2| Orfx [Mus musculus]
gi|148676418|gb|EDL08365.1| bromodomain containing 3, isoform CRA_a [Mus musculus]
Length = 743
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 329 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSRE---YPDAQGFAADIRLMFSN 385
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
KYN +V MA+ L + FE ++ ++ + ME
Sbjct: 386 CYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPME 420
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 38 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 94
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 95 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 139
>gi|148676419|gb|EDL08366.1| bromodomain containing 3, isoform CRA_b [Mus musculus]
gi|148676420|gb|EDL08367.1| bromodomain containing 3, isoform CRA_b [Mus musculus]
Length = 731
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 334 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSRE---YPDAQGFAADIRLMFSN 390
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
KYN +V MA+ L + FE ++ ++ + ME
Sbjct: 391 CYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPME 425
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 43 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 99
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 100 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 144
>gi|149039214|gb|EDL93434.1| bromodomain containing 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|197246453|gb|AAI68949.1| Brd3 protein [Rattus norvegicus]
Length = 742
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSRE---YPDAQGFAADIRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
KYN +V MA+ L + FE ++ ++ + ME
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPME 421
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|340381558|ref|XP_003389288.1| PREDICTED: bromodomain-containing protein 2-like [Amphimedon
queenslandica]
Length = 1057
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHKW-AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H+ AWPF +PVDV+GLGLHDY ++I++PMD +T+K K++ ++ Y + + AD
Sbjct: 467 FSKKHQASAWPFYNPVDVKGLGLHDYLDIIKQPMDLTTLKKKLEDRE---YEDPSQFAAD 523
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+RL+F N KYN DV MA+ + + FE K+ ++
Sbjct: 524 MRLIFTNCYKYNPPEHDVVKMARKVQDIFEFKFARM 559
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 22 GCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 81
G N S + LQ+ + I +H +AWPF PVD L + DY+ +I++PMD + IK +
Sbjct: 189 GGGNRSTNQLQYL-KNVHRIIWRHHYAWPFHKPVDPVALNIPDYFNIIKRPMDLTLIKKQ 247
Query: 82 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
+ D GY + +E D + +F N YN DDV M ++L F++K
Sbjct: 248 L---DHNGYSSAKECIQDFKTMFNNCYTYNKPTDDVVFMCQALERLFDQK 294
>gi|21594631|gb|AAH31536.1| Bromodomain containing 3 [Mus musculus]
Length = 726
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 329 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSRE---YPDAQGFAADIRLMFSN 385
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
KYN +V MA+ L + FE ++ ++ + ME
Sbjct: 386 CYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPME 420
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 38 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 94
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 95 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 139
>gi|165972331|ref|NP_001107045.1| bromodomain-containing protein 3 isoform 2 [Mus musculus]
gi|165972333|ref|NP_075825.3| bromodomain-containing protein 3 isoform 2 [Mus musculus]
gi|47115837|sp|Q8K2F0.2|BRD3_MOUSE RecName: Full=Bromodomain-containing protein 3; AltName:
Full=Bromodomain-containing FSH-like protein FSRG2
gi|74141421|dbj|BAE35988.1| unnamed protein product [Mus musculus]
gi|74195657|dbj|BAE39636.1| unnamed protein product [Mus musculus]
gi|74204674|dbj|BAE35406.1| unnamed protein product [Mus musculus]
gi|148676422|gb|EDL08369.1| bromodomain containing 3, isoform CRA_d [Mus musculus]
Length = 726
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 329 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSRE---YPDAQGFAADIRLMFSN 385
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
KYN +V MA+ L + FE ++ ++ + ME
Sbjct: 386 CYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPME 420
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 38 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 94
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 95 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 139
>gi|332221876|ref|XP_003260089.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Nomascus
leucogenys]
gi|332221878|ref|XP_003260090.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Nomascus
leucogenys]
gi|441637315|ref|XP_004090055.1| PREDICTED: bromodomain testis-specific protein [Nomascus
leucogenys]
Length = 945
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y + + ADVRL+F N
Sbjct: 291 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQE---YEDAYKFAADVRLMFMN 347
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE + ++
Sbjct: 348 CYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 32 LQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENK---YY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 89 AKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 133
>gi|327288352|ref|XP_003228892.1| PREDICTED: bromodomain-containing protein 3-like [Anolis
carolinensis]
Length = 734
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y++ + AD+RL+F N
Sbjct: 334 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YQDAQGFAADIRLMFSN 390
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 391 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 419
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---EHNYY 91
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ-------LLPKVMEEE 143
+ E D +F N YN DD+ +MA++L + F +K Q LLP V + +
Sbjct: 92 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPVPKGK 151
Query: 144 KRQ 146
R+
Sbjct: 152 ARK 154
>gi|449269062|gb|EMC79871.1| Bromodomain-containing protein 3 [Columba livia]
Length = 724
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y++ + AD+RL+F N
Sbjct: 328 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YQDAQGFAADIRLMFSN 384
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 385 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 413
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 12/125 (9%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---EHNYY 91
Query: 91 RNVREIYADVRLVFKNA--MKYNDERDDVHVMAKSLLEKFEEKWLQ-------LLPKVME 141
+ E D +F N + + DD+ +MA++L + F +K Q LLP V +
Sbjct: 92 WSASECMQDFNTMFTNCLYLSFLQPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPVPK 151
Query: 142 EEKRQ 146
+ R+
Sbjct: 152 GKGRK 156
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 10/138 (7%)
Query: 137 PKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK 196
PKV + K+ ++++A A+ T Q K + S + D + E L
Sbjct: 519 PKVAQPPKQTQQKKAPAKKANSTTTANRQPKKGGKQASATYDSDEEEEGL---------P 569
Query: 197 MSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFH-ATAQEVDLDMDAQSELTLWRLKV 255
M+ +EK+ L + RL E L + + I+ PS + E+++D + TL L+
Sbjct: 570 MTYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 629
Query: 256 FVQESLKAASRSSGDMGG 273
+V+ L+ R G
Sbjct: 630 YVKSCLQKKQRKPFSASG 647
>gi|345306075|ref|XP_001505872.2| PREDICTED: bromodomain-containing protein 3 [Ornithorhynchus
anatinus]
Length = 724
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y++ + AD+RL+F N
Sbjct: 326 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YQDAQGFAADIRLMFSN 382
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 383 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 91
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 92 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 136
>gi|449478032|ref|XP_002199360.2| PREDICTED: bromodomain-containing protein 3 [Taeniopygia guttata]
Length = 722
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y++ + AD+RL+F N
Sbjct: 326 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YQDAQGFAADIRLMFSN 382
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 383 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + +
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---EHNYF 91
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ-------LLPKVMEEE 143
+ E D V ++ YN DD+ +MA++L + F +K Q LLP V + +
Sbjct: 92 WSSSECMQDFNTVLQSCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPVPKGK 151
Query: 144 KRQ 146
R+
Sbjct: 152 GRK 154
>gi|8575733|gb|AAF78072.1| bromodomain-containing FSH-like protein FSRG2 [Mus musculus]
gi|46241516|gb|AAS82951.1| endothelial differentiation inhibitory protein D18 [Mus musculus]
Length = 726
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 329 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSRE---YPDAQGFAADIRLMFSN 385
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
KYN +V MA+ L + FE ++ ++ + ME
Sbjct: 386 CYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPME 420
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 38 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 94
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 95 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 139
>gi|126297864|ref|XP_001365890.1| PREDICTED: bromodomain-containing protein 3 [Monodelphis domestica]
Length = 724
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y++ + AD+RL+F N
Sbjct: 326 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YQDAQGFAADIRLMFSN 382
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 383 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 91
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 92 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 136
>gi|348505480|ref|XP_003440289.1| PREDICTED: bromodomain-containing protein 3-like [Oreochromis
niloticus]
Length = 513
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD + Y++ + ADVRL+F N
Sbjct: 208 YAWPFYKPVDAEALQLHDYHDIIKYPMDLSTVKKKMDAGE---YQDAQAFAADVRLIFSN 264
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV + A+ L FE+++ ++
Sbjct: 265 CYKYNPAHHDVVIKARKLQGIFEQRFAKM 293
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD LGL DY+++I PMD TIK +++ Y
Sbjct: 33 LQYMQNIVIKSLWRHQFAWPFYQPVDAVALGLPDYHKIITSPMDMGTIKKRLEN---NYY 89
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA +L + + +K Q+
Sbjct: 90 WSASECLQDFNTMFTNCYIYNKPTDDIVLMALALEKIYLQKVAQM 134
>gi|157819431|ref|NP_001102045.1| bromodomain-containing protein 3 [Rattus norvegicus]
gi|149039215|gb|EDL93435.1| bromodomain containing 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 725
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSRE---YPDAQGFAADIRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
KYN +V MA+ L + FE ++ ++ + ME
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPME 421
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|27804346|gb|AAO22237.1| BRD4-NUT fusion oncoprotein [Homo sapiens]
Length = 1846
Score = 91.3 bits (225), Expect = 5e-16, Method: Composition-based stats.
Identities = 48/103 (46%), Positives = 68/103 (66%), Gaps = 5/103 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE 142
VRL+F N KYN +V MA+ L + FE ++ + +P EE
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAK-MPDEPEE 463
Score = 75.5 bits (184), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 40.0 bits (92), Expect = 1.6, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 252 RLKVFVQESLKAASRSSGD 270
L+ +V L+ + +
Sbjct: 666 ELERYVTSCLRKKRKPQAE 684
>gi|63100514|gb|AAH95027.1| Brd3a protein [Danio rerio]
Length = 513
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y++ + ADVRL+F N
Sbjct: 314 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YQDAQTFAADVRLMFSN 370
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 371 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 399
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD LGL DY+++I+ PMD TIK ++ + Y
Sbjct: 35 LQYMQNVVVETLWKHQFAWPFYQPVDAVKLGLPDYHKIIKNPMDMGTIKKRL---ESVYY 91
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
+ E D +F N YN DD+ +MA++L + F +K + L+P+
Sbjct: 92 YSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQK-VALMPQ 138
>gi|440904692|gb|ELR55166.1| Bromodomain-containing protein 3, partial [Bos grunniens mutus]
Length = 613
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 259 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YPDAQGFAADIRLMFSN 315
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 316 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 344
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 64 DYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKS 123
DY+++I+ PMD TIK +++ Y + E D +F N YN DD+ +MA++
Sbjct: 1 DYHKIIKNPMDMGTIKKRLEN---NYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQA 57
Query: 124 LLEKFEEKWLQL 135
L + F +K Q+
Sbjct: 58 LEKIFLQKVAQM 69
>gi|224060209|ref|XP_002300086.1| global transcription factor group [Populus trichocarpa]
gi|222847344|gb|EEE84891.1| global transcription factor group [Populus trichocarpa]
Length = 630
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 113/222 (50%), Gaps = 15/222 (6%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H++ W F PVD+ L + DYY VI+ PMD TIK+K+ Y + E ADVR
Sbjct: 126 LMSHQYGWVFNSPVDIVKLNIPDYYTVIKNPMDLGTIKSKI---SSGAYSSPLEFMADVR 182
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L FKNAM YN + D ++MA +L + FE +W + K+ +E + D
Sbjct: 183 LTFKNAMVYNPQGSDAYIMADTLNKFFEMRWKAIEKKLPRAGGEVLQENSGPHEDF---- 238
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKAL 221
E +T+ AK+ + + D+ E + R M+ EE+ NLG L L E +
Sbjct: 239 ETAETSPAKKRKVTSFQHDIMPEPGK-------RGMTDEERLNLGRELESLLGEMPVNII 291
Query: 222 EIVAENNPSF-HATAQEVDLDMDAQSELTLWRLKVFVQESLK 262
+ + E+ S H +E+++D+D S+ TL+ L+ + + L+
Sbjct: 292 DFLREHCSSGRHGGEEEIEIDIDELSDDTLFTLRKLLDDYLQ 333
>gi|33416865|gb|AAH55543.1| Brd3a protein [Danio rerio]
Length = 515
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y++ + ADVRL+F N
Sbjct: 313 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YQDAQTFAADVRLMFSN 369
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 370 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 398
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD LGL DY+++I+ PMD TIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDAVKLGLPDYHKIIKNPMDMGTIKKRL---ESVYY 91
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
+ E D +F N YN DD+ +MA++L + F +K + L+P+
Sbjct: 92 YSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQK-VALMPQ 138
>gi|344309215|ref|XP_003423272.1| PREDICTED: bromodomain-containing protein 3 [Loxodonta africana]
Length = 727
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 329 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YPDAQSFAADIRLMFSN 385
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 386 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 414
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + + Y
Sbjct: 38 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENSYY 94
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 95 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 139
>gi|395506368|ref|XP_003757505.1| PREDICTED: bromodomain-containing protein 3 [Sarcophilus harrisii]
Length = 724
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y++ + AD+RL+F N
Sbjct: 326 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YQDAQGFAADIRLMFSN 382
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 383 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 91
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 92 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 136
>gi|356557783|ref|XP_003547190.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 565
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H ++W F PVD L + DY+ +I PMD TIK+K++ Y E ADVR
Sbjct: 90 LMSHTYSWVFSKPVDPIALSIPDYFTIISHPMDLGTIKSKLEKNI---YSGTEEFAADVR 146
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
L F NAMKYN +DVH+MAK L + F+ KW L
Sbjct: 147 LTFSNAMKYNPPSNDVHLMAKELSKIFDRKWKDL 180
>gi|118099425|ref|XP_425330.2| PREDICTED: bromodomain-containing protein 3 [Gallus gallus]
Length = 722
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y++ + AD+RL+F N
Sbjct: 326 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YQDAQGFAADIRLMFSN 382
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 383 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---EHNYY 91
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ-------LLPKVMEEE 143
+ E D +F N YN DD+ +MA++L + F +K Q LLP V + +
Sbjct: 92 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPVPKGK 151
Query: 144 KRQ 146
R+
Sbjct: 152 GRK 154
>gi|326930474|ref|XP_003211372.1| PREDICTED: bromodomain-containing protein 3-like [Meleagris
gallopavo]
Length = 720
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y++ + AD+RL+F N
Sbjct: 326 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YQDAQGFAADIRLMFSN 382
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 383 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---EHNYY 91
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ-------LLPKVMEEE 143
+ E D +F N YN DD+ +MA++L + F +K Q LLP V + +
Sbjct: 92 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLPPVPKGK 151
Query: 144 KRQ 146
R+
Sbjct: 152 GRK 154
>gi|194225997|ref|XP_001917930.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 3
[Equus caballus]
Length = 728
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YPDAQGFAADIRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 197 MSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFH-ATAQEVDLDMDAQSELTLWRLKV 255
MS +EK+ L + RL E L + + I+ PS + E+++D + TL L+
Sbjct: 574 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 633
Query: 256 FVQESLKAASRSSGDMGG 273
+V+ L+ R GG
Sbjct: 634 YVKSCLQKKQRKPFSTGG 651
>gi|431898968|gb|ELK07338.1| Bromodomain-containing protein 3 [Pteropus alecto]
Length = 756
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 360 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YPDAQGFAADIRLMFSN 416
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 417 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 445
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 33/135 (24%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGL---------------------------- 62
LQ+ + +H++AWPF PVD L L
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPVSARPTPLLQLPGGAAPTLAEVLPEMW 98
Query: 63 --HDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVM 120
DY+++I+ PMD TIK +++ + Y + E D +F N YN DD+ +M
Sbjct: 99 LVRDYHKIIKNPMDMGTIKKRLEN---SYYWSASECMQDFNTMFTNCYIYNKPTDDIVLM 155
Query: 121 AKSLLEKFEEKWLQL 135
A++L + F +K Q+
Sbjct: 156 AQALEKIFLQKVAQM 170
>gi|417404059|gb|JAA48805.1| Putative transcription initiation factor tfiid subunit bdf1
[Desmodus rotundus]
Length = 707
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 312 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YPDAQGFAADIRLMFSN 368
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 369 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 397
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENSYY 95
Query: 91 RNVREIYADVRLVFKNAMKYN 111
+ E D +F N YN
Sbjct: 96 WSASECMQDFNTMFTNCYIYN 116
>gi|345311855|ref|XP_001520339.2| PREDICTED: bromodomain testis-specific protein-like, partial
[Ornithorhynchus anatinus]
Length = 431
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVDV LGLH+YY+V++ PMD TIK KM+ ++ Y++ E ADVRL+F N
Sbjct: 296 YAWPFYKPVDVTALGLHNYYDVVKNPMDLGTIKKKMNNQN---YKDAHEFAADVRLMFMN 352
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN ++ MA++L + FE ++ ++
Sbjct: 353 CYKYNPPDHEIVGMARTLQDVFEMQFAKI 381
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + I +H ++WPF PVD L L DYY +I+ PMD STIK +++ K Y
Sbjct: 30 LQYLQKVVIKAIWKHSFSWPFQQPVDAVKLRLPDYYRIIKNPMDLSTIKKRLEYK---YY 86
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 87 VKASECVEDFNTMFTNCYLYNKPGDDIVLMAQALEKVFLQKVAQM 131
>gi|417404197|gb|JAA48868.1| Putative transcription initiation factor tfiid subunit bdf1
[Desmodus rotundus]
Length = 725
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YPDAQGFAADIRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENSYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|395844318|ref|XP_003794909.1| PREDICTED: bromodomain-containing protein 3 isoform 2 [Otolemur
garnettii]
Length = 743
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSRE---YPDAQGFAADIRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|296482055|tpg|DAA24170.1| TPA: bromodomain containing protein 3 [Bos taurus]
Length = 722
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YPDAQGFAADIRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|395844316|ref|XP_003794908.1| PREDICTED: bromodomain-containing protein 3 isoform 1 [Otolemur
garnettii]
Length = 726
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSRE---YPDAQGFAADIRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|116003963|ref|NP_001070341.1| bromodomain-containing protein 3 [Bos taurus]
gi|115305162|gb|AAI23579.1| Bromodomain containing 3 [Bos taurus]
Length = 722
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YPDAQGFAADIRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|351702676|gb|EHB05595.1| Bromodomain-containing protein 2 [Heterocephalus glaber]
Length = 722
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 289 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSRE---YPDAQGFAADIRLMFSN 345
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 346 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 374
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y + E D +
Sbjct: 11 KHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYYWSASECMQDFNTM 67
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
F N YN DD+ +MA++L + F +K Q+
Sbjct: 68 FTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 99
>gi|73967596|ref|XP_858014.1| PREDICTED: bromodomain-containing protein 3 isoform 3 [Canis lupus
familiaris]
Length = 728
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YPDAQGFAADIRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|242070257|ref|XP_002450405.1| hypothetical protein SORBIDRAFT_05g004810 [Sorghum bicolor]
gi|241936248|gb|EES09393.1| hypothetical protein SORBIDRAFT_05g004810 [Sorghum bicolor]
Length = 605
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ HK W F PVD G+ DY++VI PMD T+KNK+ K Y ++ E ADVR
Sbjct: 73 LIDHKGGWLFKEPVDPVLYGIPDYFDVIHNPMDLGTVKNKLTKKQ---YVSIEEFAADVR 129
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKA 153
L F NAMKYN +DVH +AK L F+ +W + K + QE++ KA
Sbjct: 130 LTFSNAMKYNPPENDVHKVAKELNGIFDSEWESVERKFRVQNPVQEQQTMKA 181
>gi|350597125|ref|XP_003484360.1| PREDICTED: bromodomain-containing protein 3 [Sus scrofa]
Length = 726
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YPDAQGFAADIRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|348574826|ref|XP_003473191.1| PREDICTED: bromodomain-containing protein 3-like [Cavia porcellus]
Length = 725
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSRE---YPDAQGFAADIRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + T Y
Sbjct: 39 LQYMQNVVVKTLWRHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENTYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|410053415|ref|XP_512452.4| PREDICTED: bromodomain-containing protein 4 [Pan troglodytes]
Length = 1161
Score = 90.5 bits (223), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 74.7 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|242065686|ref|XP_002454132.1| hypothetical protein SORBIDRAFT_04g025160 [Sorghum bicolor]
gi|241933963|gb|EES07108.1| hypothetical protein SORBIDRAFT_04g025160 [Sorghum bicolor]
Length = 711
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 118/230 (51%), Gaps = 28/230 (12%)
Query: 39 RSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 98
+ +TQ K++ F PVDV+ L + DY+++++ PMD T++ K++ Y + + A
Sbjct: 180 KKLMTQ-KYSHIFNVPVDVDKLQIPDYFDIVKTPMDLGTVQKKLES---GSYTSPSDFAA 235
Query: 99 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ 158
DVRL F NAM YN + VH MA L + FE +W + EK+ L
Sbjct: 236 DVRLTFNNAMAYNPKGHAVHDMAIQLNKMFESRWRPI-------EKK---------LASA 279
Query: 159 LTQEAVQTNKAKELRSELNEV---DMQLENLRETVIQKCRKMSTEEKKNLGTALTRLS-- 213
T++ V+ ++A R + V D+ E +R+T +K KM+ EE++ G +L +S
Sbjct: 280 ATEKHVEVDRADSKRRKTPPVDRSDVSTEGVRQTEPEKP-KMTAEEREAFGNSLASISDE 338
Query: 214 -PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 262
P + + L+ ++N E+++D+ A S+ L+ LK V + L+
Sbjct: 339 LPPHIFELLQQCIDSNTDMPGDG-EIEIDIQAVSDDMLFELKKHVDKYLQ 387
>gi|26332152|dbj|BAC29806.1| unnamed protein product [Mus musculus]
Length = 511
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 329 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSRE---YPDAQGFAADIRLMFSN 385
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
KYN +V MA+ L + FE ++ ++ + ME
Sbjct: 386 CYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPME 420
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 38 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 94
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 95 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 139
>gi|116309747|emb|CAH66790.1| H0215F08.1 [Oryza sativa Indica Group]
gi|116309918|emb|CAH66952.1| B0809H07.7 [Oryza sativa Indica Group]
Length = 456
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIK-NKMDGKDGTGYRNVREIYADVRLVFKNAMK 109
F PV+V+ LGLHDY+ VI+ PMD T++ N G+ Y + + ADVRL F NA++
Sbjct: 140 FNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGR----YSSHDDFAADVRLTFSNALR 195
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKA 169
YN +VH A LL FE+ + + +E K E ++ Q
Sbjct: 196 YNPAGHEVHTFAGDLLASFEKMYKAFMSWFEQELKLLEPPMPVPPPELPPATAPAQ---- 251
Query: 170 KELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNP 229
++ V M+ RE R+M+ EEK L L L E + L+IV + N
Sbjct: 252 --VKPRAGNVKMRKPKAREP---NKREMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNG 306
Query: 230 SFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRS 267
+ E++LD+D T W L FV KA ++S
Sbjct: 307 NPELVGGEIELDIDEMDVETQWELDRFVNNFKKALNKS 344
>gi|26345416|dbj|BAC36359.1| unnamed protein product [Mus musculus]
Length = 505
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 329 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSRE---YPDAQGFAADIRLMFSN 385
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
KYN +V MA+ L + FE ++ ++ + ME
Sbjct: 386 CYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPME 420
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 38 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 94
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 95 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 139
>gi|389608049|dbj|BAM17630.1| putative RING3 protein [Oryza sativa Indica Group]
Length = 456
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIK-NKMDGKDGTGYRNVREIYADVRLVFKNAMK 109
F PV+V+ LGLHDY+ VI+ PMD T++ N G+ Y + + ADVRL F NA++
Sbjct: 140 FNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGR----YSSHDDFAADVRLTFSNALR 195
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKA 169
YN +VH A LL FE+ + + +E K E ++ Q
Sbjct: 196 YNPAGHEVHTFAGDLLASFEKMYKAFMSWFEQELKLLEPPMPVPPPELPPATAPAQ---- 251
Query: 170 KELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNP 229
++ V M+ RE R+M+ EEK L L L E + L+IV + N
Sbjct: 252 --VKPRAGNVKMRKPKAREP---NKREMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNG 306
Query: 230 SFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRS 267
+ E++LD+D T W L FV KA ++S
Sbjct: 307 NPELVGGEIELDIDEMDVETQWELDRFVNNFKKALNKS 344
>gi|449433591|ref|XP_004134581.1| PREDICTED: transcription factor GTE11-like [Cucumis sativus]
gi|449523269|ref|XP_004168646.1| PREDICTED: transcription factor GTE11-like [Cucumis sativus]
Length = 569
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H++ W F PVD L + DY+ +I PMD T+K+K++ Y+ E AD+RL F
Sbjct: 121 HRFGWVFNQPVDPVALKIPDYFSIITDPMDLGTVKSKLER---NLYQASEEFAADIRLTF 177
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
NAM YN + VH MAK LLE FE+KW +LPK
Sbjct: 178 SNAMLYNPSGNHVHKMAKELLENFEKKW--ILPK 209
>gi|116283313|gb|AAH04832.1| Brd3 protein [Mus musculus]
Length = 501
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 329 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSRE---YPDAQGFAADIRLMFSN 385
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
KYN +V MA+ L + FE ++ ++ + ME
Sbjct: 386 CYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPME 420
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 38 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 94
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 95 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 139
>gi|379642603|ref|NP_001243832.1| bromodomain containing 3 [Xenopus (Silurana) tropicalis]
Length = 795
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD S++K KMD ++ Y + + AD+RL+F N
Sbjct: 382 YAWPFYKPVDAEALELHDYHDIIKHPMDLSSVKRKMDARE---YADAQAFAADIRLMFSN 438
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 439 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 467
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDCVKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 91
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 92 WSANECMQDFNTMFTNCYIYNKSTDDIVLMAQALEKIFLQKVAQM 136
>gi|259090114|pdb|2WP1|A Chain A, Structure Of Brdt Bromodomain 2 Bound To An Acetylated
Histone H3 Peptide
gi|259090115|pdb|2WP1|B Chain B, Structure Of Brdt Bromodomain 2 Bound To An Acetylated
Histone H3 Peptide
Length = 126
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVD + LGLH+YY+V++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 34 YAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQE---YKDAYEFAADVRLMFMN 90
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN +V MA++L + FE
Sbjct: 91 CYKYNPPDHEVVAMARTLQDVFE 113
>gi|57282316|emb|CAD43284.1| bromodomain-containing RNA-binding protein 1 [Nicotiana
benthamiana]
Length = 615
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 36 RQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 95
RQ + +HK W F PVD E LGLHDY+++I++PMD T+K+ + Y E
Sbjct: 197 RQVLGKLMKHKSGWIFNTPVDAEALGLHDYHQIIKRPMDLGTVKSNL---SNCFYPTPFE 253
Query: 96 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEE 130
ADVRL F NA+ YN + D VH A+ LL +FE+
Sbjct: 254 FAADVRLTFNNALLYNPKTDQVHGFAEQLLARFED 288
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
R+MS EEK LG L L E + + ++I+ + N E++LD++A TLW L
Sbjct: 414 REMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELD 473
Query: 255 VFVQESLKAASRS 267
FV K S++
Sbjct: 474 RFVTNWKKMVSKT 486
>gi|296191127|ref|XP_002743521.1| PREDICTED: bromodomain-containing protein 3 [Callithrix jacchus]
Length = 1364
Score = 89.7 bits (221), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMDG++ Y + + ADVRL+F N
Sbjct: 971 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGRE---YPDAQGFAADVRLMFSN 1027
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 1028 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 1056
Score = 70.5 bits (171), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 680 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 736
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 737 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 781
Score = 43.1 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 42/188 (22%), Positives = 78/188 (41%), Gaps = 17/188 (9%)
Query: 138 KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKM 197
KV K+ ++++A A+ T Q K + S + + + E L M
Sbjct: 1160 KVAPPAKQAQQKKAPAKKANSTTAAGRQLKKGGKQASASYDSEEEEEGL---------PM 1210
Query: 198 STEEKKNLGTALTRLSPEDLCKALEIVAENNPSFH-ATAQEVDLDMDAQSELTLWRLKVF 256
S +EK+ L + RL E L + + I+ PS + E+++D + TL L+ +
Sbjct: 1211 SYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELERY 1270
Query: 257 VQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALA---KPAVK 313
V+ L+ R G ++++ + +K K KR +++ L+ KPA K
Sbjct: 1271 VKSCLQKKQRKPFSASGKKQA----AKSKEELAQEKKKELEKRLQDVSGQLSSSKKPARK 1326
Query: 314 RTKKLPPN 321
P+
Sbjct: 1327 EKPGSAPS 1334
>gi|357149985|ref|XP_003575300.1| PREDICTED: transcription factor GTE9-like [Brachypodium distachyon]
Length = 705
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 113/232 (48%), Gaps = 29/232 (12%)
Query: 39 RSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 98
+ +TQ K++ F PVDVE L + DY ++++ PMD TIK K+ D Y + A
Sbjct: 172 KKLMTQ-KYSHIFNVPVDVEKLNIPDYNDIVKHPMDLGTIKKKL---DSGSYTSPSSFAA 227
Query: 99 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ 158
DVRL F NA+ YN VH MA L + FE +W K E++ A A D
Sbjct: 228 DVRLTFNNAITYNPRGHAVHDMAIQLNKIFESRW-----------KTVEKKLASATADPH 276
Query: 159 LTQEAVQTNKAKELRSELNEV---DMQLENLRETVIQKCRKMSTEEKKNLGTALTRLS-- 213
V+ ++A R + V D+ +E +R T I K M+ EEK++ G L LS
Sbjct: 277 -----VEVDRADSKRRKTPPVDCSDLSMECVRPTEIVK-PTMTFEEKESFGNCLASLSED 330
Query: 214 ---PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 262
P + L+ +++ + H E+++D+ A S+ L LK V + L+
Sbjct: 331 PELPGYIIDLLQQCIDSSNTDHLGDGEIEIDIHALSDDILLELKKQVGKYLQ 382
>gi|443691011|gb|ELT92995.1| hypothetical protein CAPTEDRAFT_169335 [Capitella teleta]
Length = 1173
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 62/96 (64%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD + LGLHDY+E+I++PMD +I+ K++ ++ Y + E +
Sbjct: 336 FAKKHAGYAWPFYKPVDADLLGLHDYHEMIKRPMDLGSIRQKLETRE---YESPAEFAEE 392
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N +YN DV +MAK L + FE ++ ++
Sbjct: 393 VRLIFTNCYRYNPPESDVVMMAKKLQDVFEMRYARM 428
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H+++WPF PVD L LHDYY++I+ PMD TIK +++ + Y
Sbjct: 47 LQYLQKVVLKALWKHQFSWPFHTPVDAVKLNLHDYYKIIKHPMDMGTIKKRLENQY---Y 103
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 150
+E D +F N YN +D+ VM +++ ++F K + P+ +E + Q+++
Sbjct: 104 HRAQECIQDWNQMFTNCYTYNKAGEDITVMCQAVEKQFVLKLSGMPPEEVEIQPPQKKQS 163
Query: 151 AK 152
K
Sbjct: 164 KK 165
>gi|389608036|dbj|BAM17618.1| putative RING3 protein [Oryza sativa Japonica Group]
Length = 456
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIK-NKMDGKDGTGYRNVREIYADVRLVFKNAMK 109
F PV+V+ LGLHDY+ VI+ PMD T++ N G+ Y + + ADVRL F NA++
Sbjct: 140 FNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGR----YSSHDDFAADVRLTFSNALR 195
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKA 169
YN +VH A LL FE+ + + +E K E ++ Q
Sbjct: 196 YNPAGHEVHTFAGDLLASFEKMYKACMSWFEQELKLLEPPMPVPPPELPPATAPAQ---- 251
Query: 170 KELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNP 229
++ V M+ RE R+M+ EEK L L L E + L+IV + N
Sbjct: 252 --VKPRAGNVKMRKPKAREP---NKREMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNG 306
Query: 230 SFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRS 267
+ E++LD+D T W L FV KA ++S
Sbjct: 307 NPELVGGEIELDIDEMDVETQWELDRFVNNFKKALNKS 344
>gi|292614925|ref|XP_002662470.1| PREDICTED: bromodomain-containing protein 2 [Danio rerio]
Length = 979
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 75/132 (56%), Gaps = 10/132 (7%)
Query: 5 LRSSSKMHFIGKKL-LEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLH 63
L S H +G++ L K +A L + F ++ ++ AWPF PVD E LGL
Sbjct: 254 LPESPPQHQVGRRTKLSERLKYCNAILKEMFSKKHSAY------AWPFYKPVDAETLGLL 307
Query: 64 DYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKS 123
DY+E+I +PMD STIK KM+ ++ Y + + AD+RL+F N KYN +V MA+
Sbjct: 308 DYHEIIHQPMDMSTIKKKMEARE---YTDALQFAADMRLMFSNCYKYNPPGHEVVSMARK 364
Query: 124 LLEKFEEKWLQL 135
L + FE ++ ++
Sbjct: 365 LQDVFEFRFSKI 376
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TI+ ++ + Y
Sbjct: 34 LQYIEKVVIRALWKHHFSWPFRQPVDAVRLNLPDYYTIIKNPMDLTTIRKRL---ENNYY 90
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA+ L + F EK ++
Sbjct: 91 WKAMECVEDFNTMFTNCYVYNRPGDDIVLMAQVLEKLFLEKVAEM 135
>gi|57282318|emb|CAD43285.1| bromodomain-containing RNA-binding protein 2 [Nicotiana
benthamiana]
Length = 613
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 36 RQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 95
RQ + +HK W F PVD E LGLHDY ++I++PMD T+K+ + Y E
Sbjct: 197 RQVLGKLMKHKSGWIFNTPVDAEALGLHDYRQIIKRPMDLGTVKSNL---SNNLYPTPFE 253
Query: 96 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEE 130
ADVRL F NA+ YN + D VHV A+ LL +FE+
Sbjct: 254 FAADVRLTFNNALLYNPKTDQVHVFAELLLTRFED 288
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
R+MS EEK LG L L E + + ++I+ + N E++LD++A TLW L
Sbjct: 416 REMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELD 475
Query: 255 VFVQESLKAASRS 267
FV K S++
Sbjct: 476 RFVTNWKKMVSKT 488
>gi|148676421|gb|EDL08368.1| bromodomain containing 3, isoform CRA_c [Mus musculus]
Length = 516
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 334 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSRE---YPDAQGFAADIRLMFSN 390
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
KYN +V MA+ L + FE ++ ++ + ME
Sbjct: 391 CYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPME 425
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 43 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 99
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 100 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 144
>gi|224013522|ref|XP_002296425.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968777|gb|EED87121.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1718
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 67/102 (65%), Gaps = 4/102 (3%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ W F PVD LGL DY++VI+KPMD TI ++D +G+ Y + +DVRL F
Sbjct: 845 HEHGWVFATPVDPVELGLDDYFDVIKKPMDLGTISRRLD--NGS-YHAFDDFKSDVRLTF 901
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQ 146
+NAMKYNDE VH MAK L +KF+ + +L+ K +E+E R+
Sbjct: 902 ENAMKYNDENSVVHEMAKELKKKFDTDYKKLM-KQLEKEHRE 942
>gi|297791027|ref|XP_002863398.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309233|gb|EFH39657.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 488
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
Query: 41 FITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 100
F+ +H+ W F PVD L + DY+ VI KPMD T+K+K+ Y N E ADV
Sbjct: 72 FLMEHRVGWLFEEPVDPVKLEIPDYFSVIRKPMDLGTVKSKLLK---NVYSNADEFAADV 128
Query: 101 RLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 140
RL F NAM+YN ++VH +AK + E FE +W +LL K M
Sbjct: 129 RLTFANAMRYNPPGNEVHTIAKEIKEIFEVRW-KLLKKKM 167
>gi|426023907|sp|F1QW93.2|BRDT_DANRE RecName: Full=Bromodomain testis-specific protein
Length = 918
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 75/132 (56%), Gaps = 10/132 (7%)
Query: 5 LRSSSKMHFIGKKL-LEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLH 63
L S H +G++ L K +A L + F ++ ++ AWPF PVD E LGL
Sbjct: 254 LPESPPQHQVGRRTKLSERLKYCNAILKEMFSKKHSAY------AWPFYKPVDAETLGLL 307
Query: 64 DYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKS 123
DY+E+I +PMD STIK KM+ ++ Y + + AD+RL+F N KYN +V MA+
Sbjct: 308 DYHEIIHQPMDMSTIKKKMEARE---YTDALQFAADMRLMFSNCYKYNPPGHEVVSMARK 364
Query: 124 LLEKFEEKWLQL 135
L + FE ++ ++
Sbjct: 365 LQDVFEFRFSKI 376
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TI+ ++ + Y
Sbjct: 34 LQYIEKVVIRALWKHHFSWPFRQPVDAVRLNLPDYYTIIKNPMDLTTIRKRL---ENNYY 90
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA+ L + F EK ++
Sbjct: 91 WKAMECVEDFNTMFTNCYVYNRPGDDIVLMAQVLEKLFLEKVAEM 135
>gi|357476121|ref|XP_003608346.1| Bromodomain-containing protein [Medicago truncatula]
gi|355509401|gb|AES90543.1| Bromodomain-containing protein [Medicago truncatula]
Length = 518
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 126/303 (41%), Gaps = 50/303 (16%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K W F PVD L LHDY+++I+ PMD T+K+K+ Y E DV+L FK
Sbjct: 163 KIGWIFSSPVDPVALNLHDYFDIIKHPMDLGTVKSKL---AKNAYSTPAEFADDVKLTFK 219
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE--------------EKRQEEEEA 151
NA+ YN + DV+ A LLEKFEE + + K E+ E +E E
Sbjct: 220 NALTYNPKGHDVNTAAMQLLEKFEELYRPIQEKFDEKSFDDELQASSWNHVEPERERERV 279
Query: 152 K------------AQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMST 199
K A+ L + A +N+ S N + +R + +
Sbjct: 280 KKKDNPIPIPPPVAKRQELLPEPASTSNQP----STSNPPPLAQSPVRTPSPTRALPVKP 335
Query: 200 EEKKN----LGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKV 255
++ N LG L PE + + ++I+ + N E++LDM+A TLW L
Sbjct: 336 LKQPNTSWDLGCRF--LPPEKMEQVVQIIRKRNGHLEQDGDEIELDMEAVDTETLWELDR 393
Query: 256 FVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRT 315
V K S+ +NNN SNK N P R+K DA K+
Sbjct: 394 LVTNWKKMVSKIKRQALMDNNNV---------PSNKGNGELPDREK--VDATPPSEGKKQ 442
Query: 316 KKL 318
KK+
Sbjct: 443 KKI 445
>gi|125549798|gb|EAY95620.1| hypothetical protein OsI_17475 [Oryza sativa Indica Group]
Length = 456
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIK-NKMDGKDGTGYRNVREIYADVRLVFKNAMK 109
F PV+V+ LGLHDY+ VI+ PMD T++ N G+ Y + + ADVRL F NA++
Sbjct: 140 FNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGR----YPSHDDFAADVRLTFSNALR 195
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKA 169
YN +VH A LL FE+ + + +E K E ++ VQ
Sbjct: 196 YNPAGHEVHTFAGDLLASFEKMYKASMSWFEQELKLLEPPMPVPPPELPPATAPVQ---- 251
Query: 170 KELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNP 229
++ V M+ RE R M+ EEK L L L E + L+IV + N
Sbjct: 252 --VKPRAANVKMRKPKAREP---NKRDMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNG 306
Query: 230 SFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRS 267
+ E++LD+D T W L FV KA ++S
Sbjct: 307 NPELVGGEIELDIDEMDVETQWELDRFVNNFKKALNKS 344
>gi|115460642|ref|NP_001053921.1| Os04g0623100 [Oryza sativa Japonica Group]
gi|38344165|emb|CAE03496.2| OSJNBa0053K19.4 [Oryza sativa Japonica Group]
gi|38345713|emb|CAD41835.2| OSJNBb0085C12.15 [Oryza sativa Japonica Group]
gi|113565492|dbj|BAF15835.1| Os04g0623100 [Oryza sativa Japonica Group]
gi|215695153|dbj|BAG90344.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 456
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 101/218 (46%), Gaps = 14/218 (6%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIK-NKMDGKDGTGYRNVREIYADVRLVFKNAMK 109
F PV+V+ LGLHDY+ VI+ PMD T++ N G+ Y + + ADVRL F NA++
Sbjct: 140 FNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGR----YPSHDDFAADVRLTFSNALR 195
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKA 169
YN +VH A LL FE+ + + +E K E ++ VQ
Sbjct: 196 YNPAGHEVHTFAGDLLASFEKMYKASMSWFEQELKLLEPPMPVPPPELPPATAPVQ---- 251
Query: 170 KELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNP 229
++ V M+ RE R M+ EEK L L L E + L+IV + N
Sbjct: 252 --VKPRAANVKMRKPKAREP---NKRDMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNG 306
Query: 230 SFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRS 267
+ E++LD+D T W L FV KA ++S
Sbjct: 307 NPELVGGEIELDIDEMDVETQWELDRFVNNFKKALNKS 344
>gi|18394534|ref|NP_564037.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
gi|75151921|sp|Q8H1D7.1|GTE5_ARATH RecName: Full=Transcription factor GTE5, chloroplastic; AltName:
Full=Bromodomain-containing protein GTE5; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E5;
Flags: Precursor
gi|23297757|gb|AAN13019.1| unknown protein [Arabidopsis thaliana]
gi|332191516|gb|AEE29637.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
Length = 487
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 15 GKKLLEGGCKNLSASLLQFFVRQARSFITQ---HKWAWPFMHPVDVEGLGLHDYYEVIEK 71
GKK G K +Q F + S +T+ HK AW F PVD +GLGLHDY+ ++++
Sbjct: 118 GKKSGHGADKGT----VQIF-KNCNSLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKE 172
Query: 72 PMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
PMD T+K K+ GK + Y++ + DVRL F NA+ YN DV+ A+ LL FE+K
Sbjct: 173 PMDLGTVKTKL-GK--SLYKSPLDFAEDVRLTFNNAILYNPIGHDVYRFAELLLNMFEDK 229
Query: 132 WLQL 135
W+ +
Sbjct: 230 WVSI 233
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
R ++ EEK+ L L L + L ++I+ ++NP E++LD+D+ TLW L
Sbjct: 328 RDLTLEEKRRLSEELQDLPYDKLETVVQIIKKSNPELSQKDDEIELDIDSLDINTLWELY 387
Query: 255 VFV---QESLKAASRSSG 269
FV +ESL + + G
Sbjct: 388 RFVTGYKESLSKKNEAHG 405
>gi|356549150|ref|XP_003542960.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 566
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H ++W F+ PVD L + DY+ +I PMD TIK+K++ Y E DVR
Sbjct: 90 LMSHSYSWVFLKPVDPVALSIPDYFTIISHPMDLGTIKSKLER---NIYSGTEEFADDVR 146
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
L F NAMKYN +DVH+MAK L + F+ KW
Sbjct: 147 LTFSNAMKYNPPGNDVHMMAKELSKIFDRKW 177
>gi|428176256|gb|EKX45141.1| hypothetical protein GUITHDRAFT_108789 [Guillardia theta CCMP2712]
Length = 220
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 103/216 (47%), Gaps = 35/216 (16%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
++ H +W F PVD E LGL DY+ VI++PMD T+K+ ++ G N ++ DV
Sbjct: 24 LSAHPNSWVFNEPVDAEKLGLPDYHIVIKRPMDLGTVKSNLE--KGV-LANPQQFKDDVL 80
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
LVF+NAM YN E DVHVMAK+L FE KW Q +M+ A +
Sbjct: 81 LVFRNAMTYNPEGHDVHVMAKTLKVLFEGKWSQNEGIIMD-----------AYNNAGSAS 129
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKAL 221
E+ ++ E D L+N+ M+ EEK+ L ++ +L + L +
Sbjct: 130 ESTKSKAGSE--------DSSLDNV---------PMTYEEKRELSASMNKLPGKRLASVV 172
Query: 222 EIVAENNPSFHATA----QEVDLDMDAQSELTLWRL 253
+ E N + E+++D+D TL +L
Sbjct: 173 SFIHEKNSKILMQSGDDPDELEVDIDKLDNATLRQL 208
>gi|357447117|ref|XP_003593834.1| Bromodomain-containing factor [Medicago truncatula]
gi|355482882|gb|AES64085.1| Bromodomain-containing factor [Medicago truncatula]
Length = 520
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 65/116 (56%), Gaps = 8/116 (6%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H ++W F PVD L + DY+ VI PMD TIK K+D Y + E ADVR
Sbjct: 90 LISHPYSWVFKTPVDPVALNIPDYFTVISHPMDLGTIKFKLDK---NIYYSKEEFAADVR 146
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDM 157
L F NAM YN +DVH+MAK L + FE KW K M+++ E+E K++ M
Sbjct: 147 LTFSNAMTYNPPSNDVHLMAKELNKLFERKW-----KDMDKKWNFEDEHEKSETGM 197
>gi|444519215|gb|ELV12653.1| Guanine nucleotide exchange factor VAV2 [Tupaia chinensis]
Length = 1580
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 283 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSRE---YPDAQGFAADIRLMFSN 339
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 340 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 368
>gi|47497296|dbj|BAD19338.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|47848300|dbj|BAD22164.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|215768414|dbj|BAH00643.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 480
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 25/221 (11%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
F PVD L + DY+++I+KPMD TI+NK+ D Y + E ADVRL F NAM Y
Sbjct: 187 FDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKL---DSGSYTSPSEFAADVRLTFSNAMTY 243
Query: 111 NDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAK 170
N VH A L + FE +W + +E++ EA ++D + + K
Sbjct: 244 NPRGHVVHDYAIQLNKMFESRW-----RTIEKKLASIATEAHVEVDR------ADSKRRK 292
Query: 171 ELRSELNEVDMQL----ENLRETVIQKCRKMSTEEKKNLGTALTRLS-----PEDLCKAL 221
+ +EV + E++R T K KM+ EEK++ G L LS P + L
Sbjct: 293 TPPVDCSEVSTECVRPTESVRPTESVK-PKMTFEEKESFGNCLASLSEDPEVPSHIIDLL 351
Query: 222 EIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 262
+ +NN + E+++D+ A S+ L+ LK V + L+
Sbjct: 352 QQCIDNN-TDQLGDGEIEIDIHAVSDDLLFELKKHVDKYLQ 391
>gi|9665057|gb|AAF97259.1|AC034106_2 Contains similarity to female sterile homeotic-related protein
Frg-1 from Mus musculus gb|AF045462 and contains a
bromodomain PF|00439 [Arabidopsis thaliana]
Length = 440
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 15 GKKLLEGGCKNLSASLLQFFVRQARSFITQ---HKWAWPFMHPVDVEGLGLHDYYEVIEK 71
GKK G K +Q F + S +T+ HK AW F PVD +GLGLHDY+ ++++
Sbjct: 118 GKKSGHGADKGT----VQIF-KNCNSLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKE 172
Query: 72 PMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
PMD T+K K+ GK + Y++ + DVRL F NA+ YN DV+ A+ LL FE+K
Sbjct: 173 PMDLGTVKTKL-GK--SLYKSPLDFAEDVRLTFNNAILYNPIGHDVYRFAELLLNMFEDK 229
Query: 132 WLQL 135
W+ +
Sbjct: 230 WVSI 233
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
R ++ EEK+ L L L + L ++I+ ++NP E++LD+D+ TLW L
Sbjct: 328 RDLTLEEKRRLSEELQDLPYDKLETVVQIIKKSNPELSQKDDEIELDIDSLDINTLWELY 387
Query: 255 VFV---QESLKAASRSSG 269
FV +ESL + + G
Sbjct: 388 RFVTGYKESLSKKNEAHG 405
>gi|358340347|dbj|GAA29956.2| bromodomain-containing protein 3 [Clonorchis sinensis]
Length = 1466
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 129/280 (46%), Gaps = 49/280 (17%)
Query: 23 CKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM 82
C N+ + + + ++ F F+ PVD +GLHDY+ +++KPMD T+K K+
Sbjct: 1121 CSNILSEISSYRYKELNHF---------FIKPVDARSMGLHDYHNIVKKPMDLHTVKVKL 1171
Query: 83 DGKDGTGYRNVREIYA-DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
D +G + R +A DVRL+F N KYN E DV + K L FE+ +L +P E
Sbjct: 1172 D----SGQYHTRSDFAEDVRLIFTNCYKYNGESSDVGKIGKVLSGIFED-FLSKVPADNE 1226
Query: 142 E----EKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLEN-LRETVI----- 191
+ + +E + + Q + +Q + A EL S LN ++ Q + L + +
Sbjct: 1227 DLDQLIQNSIKEHQRLTVQFQQCNDELQRSTA-ELSSILNTLNSQAKRALHHSTVPVPNS 1285
Query: 192 ----------------------QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNP 229
+ + M+ +EK+ L + +L E L + ++I+ ++ P
Sbjct: 1286 TEVSGYPQSIMCGYEIDEEMPERNVQLMTYDEKRQLSLDINKLPGEKLGQVIQIIQQHEP 1345
Query: 230 SFH-ATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSS 268
S E++LD + TL L+ +V+ L+ A SS
Sbjct: 1346 SHRDCNPDEIELDFETLQHTTLRELEQYVKAVLRNAKMSS 1385
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKNAMK 109
F+ PVD E +GLHDY++V++K MD ST+K K++ TG Y + E D+RL+F N K
Sbjct: 199 FLKPVDAEAMGLHDYHDVVKKAMDLSTVKTKLE----TGQYHSKYEFADDIRLMFNNCYK 254
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQL 135
YN E DV + K L FEE + ++
Sbjct: 255 YNGEDSDVAKVGKLLQAIFEESFAKV 280
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
L++ ++ + + + K+ WPF VD E L L DY ++++ PMD TIK +++ K Y
Sbjct: 913 LEYIKKEVINRLLKEKYVWPFTRLVDHERLNLPDYPKIVKHPMDLGTIKQRLNLK---FY 969
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
+ E + D+ +F+N +N DD+ MA LE+ + L+ +P
Sbjct: 970 HSSVECFDDLFTMFRNCYIFNKPGDDIVGMAVK-LEQLARELLKSMP 1015
>gi|89267975|emb|CAJ81450.1| bromodomain, testis-specific [Xenopus (Silurana) tropicalis]
Length = 438
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD S++K KMD ++ Y + + AD+RL+F N
Sbjct: 339 YAWPFYKPVDAEALELHDYHDIIKHPMDLSSVKRKMDARE---YADAQAFAADIRLMFSN 395
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 396 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 424
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y + E D +
Sbjct: 5 KHQFAWPFYQPVDCVKLNLPDYHKIIKNPMDMGTIKKRL---ENNYYWSANECMQDFNTM 61
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
F N YN DD+ +MA++L + F +K Q+
Sbjct: 62 FTNCYIYNKSTDDIVLMAQALEKIFLQKVAQM 93
>gi|218199690|gb|EEC82117.1| hypothetical protein OsI_26141 [Oryza sativa Indica Group]
Length = 484
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
Query: 23 CKNLSASLLQFFVRQARSFITQ---HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 79
CKN + RQ S + + HK W F PVD G+ DY++VI PMD T+K
Sbjct: 50 CKNKVDPMNTSKSRQCGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVK 109
Query: 80 NKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
K+ K Y N E ADVRL F NAMKYN +DVH +A L + F+ +W
Sbjct: 110 RKLTSKQ---YSNPYEFAADVRLTFSNAMKYNPPGNDVHAIADQLNKIFDSEW 159
>gi|356574042|ref|XP_003555161.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 741
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H++AW F PVDV L L DY+ +I++PMD T+KNK+ + Y E DV+
Sbjct: 188 LMNHQYAWVFNTPVDVVKLNLPDYFTIIKRPMDLGTVKNKLASGE---YAGPLEFADDVK 244
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
L F NAM YN +DVH+MA +L + FE +W
Sbjct: 245 LTFSNAMDYNPSGNDVHLMADTLNKYFELRW 275
>gi|413925460|gb|AFW65392.1| hypothetical protein ZEAMMB73_923875 [Zea mays]
Length = 613
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ HK W F PVD + + DY++VI PMD T+KNK+ K Y ++ E ADVR
Sbjct: 73 LIDHKGGWLFKDPVDPDLYKIPDYFDVIRNPMDLGTVKNKLTKKK---YVSIEEFAADVR 129
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
L F NAMKYN +DVH A+ L E F+ +W
Sbjct: 130 LTFSNAMKYNPPGNDVHAFARELNEIFDSEW 160
>gi|63100516|gb|AAH95028.1| Wu:fi25h02 protein, partial [Danio rerio]
Length = 600
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 75/132 (56%), Gaps = 10/132 (7%)
Query: 5 LRSSSKMHFIGKKL-LEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLH 63
L S H +G++ L K +A L + F ++ ++ AWPF PVD E LGL
Sbjct: 254 LPESPPQHQVGRRTKLSERLKYCNAILKEMFSKKHSAY------AWPFYKPVDAETLGLL 307
Query: 64 DYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKS 123
DY+E+I +PMD STIK KM+ ++ Y + + AD+RL+F N KYN +V MA+
Sbjct: 308 DYHEIIHQPMDMSTIKKKMEARE---YTDALQFAADMRLMFSNCYKYNPPGHEVVSMARK 364
Query: 124 LLEKFEEKWLQL 135
L + FE ++ ++
Sbjct: 365 LQDVFEFRFSKI 376
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TI+ ++ + Y
Sbjct: 34 LQYIEKVVIRALWKHHFSWPFRQPVDAVRLNLPDYYTIIKNPMDLTTIRKRL---ENNYY 90
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA+ L + F EK
Sbjct: 91 WKAMECVEDFNTMFTNCYVYNRPGDDIVLMAQVLEKLFLEK 131
>gi|134105292|pdb|2OO1|A Chain A, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|134105293|pdb|2OO1|B Chain B, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|134105294|pdb|2OO1|C Chain C, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|134105295|pdb|2OO1|D Chain D, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|340708300|pdb|3S92|A Chain A, Crystal Structure Of The Second Bromodomain Of Human Brd3
In Complex With The Inhibitor Jq1
Length = 113
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMDG++ Y + + ADVRL+F N
Sbjct: 27 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGRE---YPDAQGFAADVRLMFSN 83
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 84 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 112
>gi|57282314|emb|CAD43283.1| bromodomain-containing RNA-binding protein 1 [Solanum tuberosum]
Length = 602
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 14 IGKKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPM 73
G + GG K + + RQ + + +HK W F PVD E LGLHDY+++I++P+
Sbjct: 175 FGNPVGGGGVKAIGTESMMKECRQILAKLMKHKNGWIFNIPVDAEALGLHDYHQIIKRPI 234
Query: 74 DFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 133
D T+K+ + Y + E ADVRL F NA+ YN + D V+ A+ LL +FE+ +
Sbjct: 235 DLGTVKSNL---AKNFYPSPFEFAADVRLTFNNALLYNPKTDQVNGFAEQLLGRFEDMFR 291
Query: 134 QL 135
L
Sbjct: 292 PL 293
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%)
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
R M+ EEK LG L L E + + ++I+ + N E++LD++A TLW L
Sbjct: 407 RVMNMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELD 466
Query: 255 VFVQESLKAASRS 267
FV K S++
Sbjct: 467 RFVTNWKKMVSKT 479
>gi|159164343|pdb|2E7N|A Chain A, Solution Structure Of The Second Bromodomain From Human
Bromodomain-Containing Protein 3
Length = 117
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMDG++ Y + + ADVRL+F N
Sbjct: 32 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGRE---YPDAQGFAADVRLMFSN 88
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 89 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 117
>gi|357461403|ref|XP_003600983.1| Global transcription factor group [Medicago truncatula]
gi|355490031|gb|AES71234.1| Global transcription factor group [Medicago truncatula]
Length = 59
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 49/59 (83%)
Query: 73 MDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
M+F TIK KM+ KDG Y+N+REIY DVRL+FKNAMKYN+E + VHVMAK+ L+KFE K
Sbjct: 1 MEFITIKRKMEAKDGYVYKNIREIYVDVRLIFKNAMKYNNEINYVHVMAKTSLQKFENK 59
>gi|255554567|ref|XP_002518322.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223542542|gb|EEF44082.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 634
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK+ + F PVDVE + LHDY+E+I+KPMD T+K K+ + Y + + ADVR
Sbjct: 244 LMKHKFGYIFNEPVDVERMNLHDYFEIIKKPMDLGTVKKKLGSNE---YESPIDFAADVR 300
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEE 130
L F NAMKYN + +V+ A+ L +FEE
Sbjct: 301 LTFNNAMKYNPKGHEVYTFAEQFLSRFEE 329
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
R+MS EEK LG L L E + + ++I+ + N E++LD++A TLW L
Sbjct: 458 REMSLEEKHKLGVGLQSLPQEKMEQVVQIIRKRNGHLRQDGDEIELDIEAVDTETLWELD 517
Query: 255 VFVQESLKAASR 266
FV K S+
Sbjct: 518 RFVTNYKKMVSK 529
>gi|125591685|gb|EAZ32035.1| hypothetical protein OsJ_16213 [Oryza sativa Japonica Group]
Length = 337
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 104/228 (45%), Gaps = 16/228 (7%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIK-NKMDGKDGTGYRNVREIYADVRLVFKNAMK 109
F PV+V+ LGLHDY+ VI+ PMD T++ N G+ Y + + ADVRL F NA++
Sbjct: 21 FNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGR----YPSHDDFAADVRLTFSNALR 76
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKA 169
YN +VH A LL FE+ + + +E K E ++ VQ
Sbjct: 77 YNPAGHEVHTFAGDLLASFEKMYKASMSWFEQELKLLEPPMPVPPPELPPATAPVQ---- 132
Query: 170 KELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNP 229
++ V M+ RE R M+ EEK L L L E + L+IV + N
Sbjct: 133 --VKPRAANVKMRKPKAREP---NKRDMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNG 187
Query: 230 SFHATAQEVDLDMDAQSELTLWRLKVFVQESLKA--ASRSSGDMGGNN 275
+ E++LD+D T W L FV KA SR + + G N
Sbjct: 188 NPELVGGEIELDIDEMDVETQWELDRFVNNFKKALNKSRRAAIVNGEN 235
>gi|15810439|gb|AAL07107.1| unknown protein [Arabidopsis thaliana]
Length = 487
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 15 GKKLLEGGCKNLSASLLQFFVRQARSFITQ---HKWAWPFMHPVDVEGLGLHDYYEVIEK 71
GKK G K +Q F + S +T+ HK AW F PVD +GLGLHDY+ ++++
Sbjct: 118 GKKSGHGADKGT----VQIF-KNCNSLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKE 172
Query: 72 PMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
PMD T+K K+ GK + Y++ + DVRL F NA+ YN DV+ A+ LL FE+K
Sbjct: 173 PMDLGTVKIKL-GK--SLYKSPLDFAEDVRLTFNNAILYNPIGHDVYRFAELLLNMFEDK 229
Query: 132 WLQL 135
W+ +
Sbjct: 230 WVSI 233
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
R ++ EEK+ L L L + L ++I+ ++NP E++LD+D+ TLW L
Sbjct: 328 RDLTLEEKRRLSEELQDLPYDKLETVVQIIKKSNPELSQKDDEIELDIDSLDINTLWELY 387
Query: 255 VFV---QESLKAASRSSG 269
FV +ESL + + G
Sbjct: 388 RFVTGYKESLSKKNEAHG 405
>gi|348536160|ref|XP_003455565.1| PREDICTED: bromodomain-containing protein 3 [Oreochromis niloticus]
Length = 678
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD STI+ KMD + Y + + DVRL+F N
Sbjct: 326 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTIRKKMDKGE---YSDPQSFATDVRLMFSN 382
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 383 CYKYNPPDHEVVAMARKLQDVFEMRFAKI 411
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L LHDY++VI+ PMD TIK ++ + Y
Sbjct: 36 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLCLHDYHKVIKNPMDMGTIKKRL---ENNYY 92
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 93 WSASEAMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 137
>gi|9294219|dbj|BAB02121.1| unnamed protein product [Arabidopsis thaliana]
Length = 818
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 39/232 (16%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLV 103
H +W F PVDV L + DY I+ PMD T+K + +G Y + E ADVRL
Sbjct: 190 HPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNL----ASGVYSSPHEFAADVRLT 245
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKW-----------LQLLPKVMEEEKRQEEEEAK 152
F NAM YN DVH+M L + FE +W +Q LP V E +E K
Sbjct: 246 FTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKLPPCSMQTLPAVTLEPN----DERK 301
Query: 153 AQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTE-EKKNLGTALTR 211
A + +V K +++ S +RE+V + + + TE E+ LG L
Sbjct: 302 AAI-------SVPPAKKRKMASP----------VRESVPEPVKPLMTEVERHRLGRQLES 344
Query: 212 LSPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLKVFVQESLK 262
L E ++ + ++N + A+ E+++D+D S+ L L+ + E ++
Sbjct: 345 LLDELPAHIIDFLKKHNSNGGEIAEDEIEIDIDVLSDEVLVTLRNLLDEYIQ 396
>gi|13699186|dbj|BAB41205.1| kinase-like protein [Oryza sativa (japonica cultivar-group)]
Length = 714
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 25/221 (11%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
F PVD L + DY+++I+KPMD TI+NK+ D Y + E ADVRL F NAM Y
Sbjct: 187 FDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKL---DSGSYTSPSEFAADVRLTFSNAMTY 243
Query: 111 NDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAK 170
N VH A L + FE +W + +E++ EA ++D + + K
Sbjct: 244 NPRGHVVHDYAIQLNKMFESRW-----RTIEKKLASIATEAHVEVDR------ADSKRRK 292
Query: 171 ELRSELNEVDMQL----ENLRETVIQKCRKMSTEEKKNLGTALTRLS-----PEDLCKAL 221
+ +EV + E++R T K KM+ EEK++ G L LS P + L
Sbjct: 293 TPPVDCSEVSTECVRPTESVRPTESVK-PKMTFEEKESFGNCLASLSEDPEVPSHIIDLL 351
Query: 222 EIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 262
+ +NN + E+++D+ A S+ L+ LK V + L+
Sbjct: 352 QQCIDNN-TDQLGDGEIEIDIHAVSDDLLFELKKHVDKYLQ 391
>gi|15232127|ref|NP_189362.1| global transcription factor group E8 [Arabidopsis thaliana]
gi|327488239|sp|Q9LK27.2|GTE8_ARATH RecName: Full=Transcription factor GTE8; AltName:
Full=Bromodomain-containing protein GTE8; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E8
gi|332643763|gb|AEE77284.1| global transcription factor group E8 [Arabidopsis thaliana]
Length = 813
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 39/232 (16%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLV 103
H +W F PVDV L + DY I+ PMD T+K + +G Y + E ADVRL
Sbjct: 190 HPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNL----ASGVYSSPHEFAADVRLT 245
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKW-----------LQLLPKVMEEEKRQEEEEAK 152
F NAM YN DVH+M L + FE +W +Q LP V E +E K
Sbjct: 246 FTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKLPPCSMQTLPAVTLEPN----DERK 301
Query: 153 AQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTE-EKKNLGTALTR 211
A + +V K +++ S +RE+V + + + TE E+ LG L
Sbjct: 302 AAI-------SVPPAKKRKMASP----------VRESVPEPVKPLMTEVERHRLGRQLES 344
Query: 212 LSPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLKVFVQESLK 262
L E ++ + ++N + A+ E+++D+D S+ L L+ + E ++
Sbjct: 345 LLDELPAHIIDFLKKHNSNGGEIAEDEIEIDIDVLSDEVLVTLRNLLDEYIQ 396
>gi|218191119|gb|EEC73546.1| hypothetical protein OsI_07959 [Oryza sativa Indica Group]
Length = 714
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 25/221 (11%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
F PVD L + DY+++I+KPMD TI+NK+ D Y + E ADVRL F NAM Y
Sbjct: 187 FDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKL---DSGSYTSPSEFAADVRLTFSNAMTY 243
Query: 111 NDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAK 170
N VH A L + FE +W + +E++ EA ++D + + K
Sbjct: 244 NPRGHVVHDYAIQLNKMFESRW-----RTIEKKLASIATEAHVEVDR------ADSKRRK 292
Query: 171 ELRSELNEVDMQL----ENLRETVIQKCRKMSTEEKKNLGTALTRLS-----PEDLCKAL 221
+ +EV + E++R T K KM+ EEK++ G L LS P + L
Sbjct: 293 TPPVDCSEVSTECVRPTESVRPTESVK-PKMTFEEKESFGNCLASLSEDPEVPSHIIDLL 351
Query: 222 EIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 262
+ +NN + E+++D+ A S+ L+ LK V + L+
Sbjct: 352 QQCIDNN-TDQLGDGEIEIDIHAVSDDLLFELKKHVDKYLQ 391
>gi|159794742|pdb|2DWW|A Chain A, Crystal Structure Of Bromodomain-Containing Protein 4
Length = 114
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 60/93 (64%), Gaps = 4/93 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ P D STIK+K++ ++ YR+ +E AD
Sbjct: 20 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPXDXSTIKSKLESRE---YRDAQEFGAD 76
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
VRL F N KYN +V A+ L + FE ++
Sbjct: 77 VRLXFSNCYKYNPPDHEVVAXARKLQDVFEXRF 109
>gi|115447147|ref|NP_001047353.1| Os02g0601800 [Oryza sativa Japonica Group]
gi|47497295|dbj|BAD19337.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|47848299|dbj|BAD22163.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|113536884|dbj|BAF09267.1| Os02g0601800 [Oryza sativa Japonica Group]
gi|222623188|gb|EEE57320.1| hypothetical protein OsJ_07416 [Oryza sativa Japonica Group]
Length = 714
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 25/221 (11%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
F PVD L + DY+++I+KPMD TI+NK+ D Y + E ADVRL F NAM Y
Sbjct: 187 FDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKL---DSGSYTSPSEFAADVRLTFSNAMTY 243
Query: 111 NDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAK 170
N VH A L + FE +W + +E++ EA ++D + + K
Sbjct: 244 NPRGHVVHDYAIQLNKMFESRW-----RTIEKKLASIATEAHVEVDR------ADSKRRK 292
Query: 171 ELRSELNEVDMQL----ENLRETVIQKCRKMSTEEKKNLGTALTRLS-----PEDLCKAL 221
+ +EV + E++R T K KM+ EEK++ G L LS P + L
Sbjct: 293 TPPVDCSEVSTECVRPTESVRPTESVK-PKMTFEEKESFGNCLASLSEDPEVPSHIIDLL 351
Query: 222 EIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 262
+ +NN + E+++D+ A S+ L+ LK V + L+
Sbjct: 352 QQCIDNN-TDQLGDGEIEIDIHAVSDDLLFELKKHVDKYLQ 391
>gi|334185652|ref|NP_001189985.1| global transcription factor group E8 [Arabidopsis thaliana]
gi|332643764|gb|AEE77285.1| global transcription factor group E8 [Arabidopsis thaliana]
Length = 764
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 39/232 (16%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLV 103
H +W F PVDV L + DY I+ PMD T+K + +G Y + E ADVRL
Sbjct: 141 HPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNL----ASGVYSSPHEFAADVRLT 196
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKW-----------LQLLPKVMEEEKRQEEEEAK 152
F NAM YN DVH+M L + FE +W +Q LP V E +E K
Sbjct: 197 FTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKLPPCSMQTLPAVTLEPN----DERK 252
Query: 153 AQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTE-EKKNLGTALTR 211
A + +V K +++ S +RE+V + + + TE E+ LG L
Sbjct: 253 AAI-------SVPPAKKRKMASP----------VRESVPEPVKPLMTEVERHRLGRQLES 295
Query: 212 LSPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLKVFVQESLK 262
L E ++ + ++N + A+ E+++D+D S+ L L+ + E ++
Sbjct: 296 LLDELPAHIIDFLKKHNSNGGEIAEDEIEIDIDVLSDEVLVTLRNLLDEYIQ 347
>gi|356560519|ref|XP_003548539.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 744
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 60/100 (60%), Gaps = 6/100 (6%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H++AW F PVDV L L DY+ +I++PMD T+K+K+ + Y E DV+
Sbjct: 191 LMSHQYAWVFKTPVDVVKLNLPDYFTIIKRPMDLGTVKSKLAAGE---YAGPLEFADDVK 247
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL---LPK 138
L F NAM YN +DVH+MA +L + FE +W + LPK
Sbjct: 248 LTFSNAMNYNPSGNDVHLMADTLNKYFELRWKAIEKKLPK 287
>gi|198474627|ref|XP_002132733.1| GA25991 [Drosophila pseudoobscura pseudoobscura]
gi|198138474|gb|EDY70135.1| GA25991 [Drosophila pseudoobscura pseudoobscura]
Length = 485
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 9/120 (7%)
Query: 16 KKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDF 75
KK L K+ + L+ F ++ +AWPF PVD + LGL+DYY +I+ PMD
Sbjct: 109 KKKLSEALKSCNEILMVLFSKK------HSAYAWPFYEPVDAQNLGLYDYYNIIKTPMDL 162
Query: 76 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
T+K K+D + Y++ AD+RL+F N KYN D+ +M + L FE ++++
Sbjct: 163 GTVKQKLDNR---VYKSASAFAADMRLIFSNCYKYNPVHHDIVIMCEKLQLAFEMLYVKV 219
>gi|195148234|ref|XP_002015079.1| GL19519 [Drosophila persimilis]
gi|194107032|gb|EDW29075.1| GL19519 [Drosophila persimilis]
Length = 486
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 9/120 (7%)
Query: 16 KKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDF 75
KK L K+ + L+ F ++ +AWPF PVD + LGL+DYY +I+ PMD
Sbjct: 109 KKKLSEALKSCNEILMVLFSKK------HSAYAWPFYEPVDAQNLGLYDYYNIIKTPMDL 162
Query: 76 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
T+K K+D + Y++ AD+RL+F N KYN D+ +M + L FE ++++
Sbjct: 163 GTVKQKLDNR---VYKSASAFAADMRLIFSNCYKYNPVHHDIVIMCEKLQLAFEMLYVKV 219
>gi|325190099|emb|CCA24581.1| histone acetyltransferase putative [Albugo laibachii Nc14]
Length = 2117
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK+ W F PVD L + DY+ I +PMD TIK K+D Y++++ +DVR
Sbjct: 1104 MMEHKFGWVFSSPVDTVALEIPDYFRTIRRPMDLGTIKKKLDLG---FYKHIQHFASDVR 1160
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQL 155
L F NA YN E DVH +AK +L F ++ +L + E+E+ Q +EA +L
Sbjct: 1161 LTFNNAKLYNSEGSDVHNLAKDMLNDFNVEFRKLEIDINEQERLQRLKEAACRL 1214
>gi|297814970|ref|XP_002875368.1| hypothetical protein ARALYDRAFT_484508 [Arabidopsis lyrata subsp.
lyrata]
gi|297321206|gb|EFH51627.1| hypothetical protein ARALYDRAFT_484508 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 109/232 (46%), Gaps = 39/232 (16%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLV 103
H +W F PVDV L + DY +I+ PMD T+K + +G Y + E ADVRL
Sbjct: 190 HPHSWVFQAPVDVVKLNIPDYLTIIKHPMDLGTVKKNL----ASGVYSSPHEFAADVRLT 245
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKW-----------LQLLPKVMEEEKRQEEEEAK 152
F NAM YN DVH+M L + FE +W +Q LP + E +E K
Sbjct: 246 FTNAMTYNPPGHDVHIMGDILSKLFEARWKTIEKKLPACSMQTLPAITLEPN----DERK 301
Query: 153 AQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK-MSTEEKKNLGTALTR 211
A + +V K +++ S +RE+V + + M+ EE+ LG L
Sbjct: 302 AAI-------SVPPAKKRKMASP----------VRESVPEPVKPLMTAEERHRLGRQLES 344
Query: 212 LSPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLKVFVQESLK 262
L E ++ + +++ + A+ E+++D+D S+ L L+ + E ++
Sbjct: 345 LLDELPAHIIDFLKKHSSNGGEIAEDEIEIDIDVLSDEVLVTLRNLLDEYIQ 396
>gi|198425802|ref|XP_002127242.1| PREDICTED: similar to bromodomain-containing protein 2 [Ciona
intestinalis]
Length = 1083
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 12/113 (10%)
Query: 23 CKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM 82
C NL L FF ++ SF +WPF VD + LGLHDYY++I+ PMD T++ KM
Sbjct: 362 CNNL---LKDFFSKKHASF------SWPFYKSVDADLLGLHDYYDMIKNPMDLGTMRKKM 412
Query: 83 DGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ ++ YR E D+RL+ N KYN DV MAK L + FE K+ ++
Sbjct: 413 ESRE---YRTPDEFAYDMRLIVTNCYKYNPPDHDVVAMAKKLSDVFEMKFAKM 462
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + + +H +AWPF PVD LGL DY+++I+ PMD + IK K++ Y
Sbjct: 39 LQYLRKVVMTSLWKHHFAWPFHVPVDPVKLGLPDYFDIIKHPMDMALIKKKLETNQ---Y 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
+ +E D L+F N YN DDV +MA++L + F +K
Sbjct: 96 YSAKECLQDFNLMFSNCYIYNKPTDDVVLMAQTLEKNFLQK 136
>gi|219888341|gb|ACL54545.1| unknown [Zea mays]
gi|413937646|gb|AFW72197.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 538
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 114/230 (49%), Gaps = 28/230 (12%)
Query: 39 RSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 98
+ +TQ K++ F PVD+ L + DY+++++ PMD T+K K++ Y + + A
Sbjct: 177 KKLMTQ-KYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLES---GSYTSPSDFAA 232
Query: 99 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ 158
DVRL F NAM YN VH MA L + FE +W + EK+ L
Sbjct: 233 DVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPI-------EKK---------LASA 276
Query: 159 LTQEAVQTNKAKELRSELNEV---DMQLENLRETVIQKCRKMSTEEKKNLGTALTRLS-- 213
T++ V+ ++A R + V D+ +E R+T + KM+ EE++ G L +S
Sbjct: 277 ATEKHVEVDRADSKRRKTPPVDRSDVSMECARQTEPE-TPKMTAEEREAFGNCLASISDE 335
Query: 214 -PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 262
P + + L+ ++N E+++D+ A S+ L+ LK V + L+
Sbjct: 336 LPPHIFELLQQCIDSNADLSGDG-EIEIDIHAVSDDLLFELKKHVDKYLQ 384
>gi|306922427|ref|NP_001105214.2| LOC542112 [Zea mays]
Length = 696
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 114/230 (49%), Gaps = 28/230 (12%)
Query: 39 RSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 98
+ +TQ K++ F PVD+ L + DY+++++ PMD T+K K++ Y + + A
Sbjct: 177 KKLMTQ-KYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLES---GSYTSPSDFAA 232
Query: 99 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ 158
DVRL F NAM YN VH MA L + FE +W + EK+ L
Sbjct: 233 DVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPI-------EKK---------LASA 276
Query: 159 LTQEAVQTNKAKELRSELNEV---DMQLENLRETVIQKCRKMSTEEKKNLGTALTRLS-- 213
T++ V+ ++A R + V D+ +E R+T + KM+ EE++ G L +S
Sbjct: 277 ATEKHVEVDRADSKRRKTPPVDRSDVSMECARQTEPE-TPKMTAEEREAFGNCLASISDE 335
Query: 214 -PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 262
P + + L+ ++N E+++D+ A S+ L+ LK V + L+
Sbjct: 336 LPPHIFELLQQCIDSNADLSGDG-EIEIDIHAVSDDLLFELKKHVDKYLQ 384
>gi|29569106|gb|AAO84020.1| global transcription factor group E [Zea mays]
Length = 696
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 114/230 (49%), Gaps = 28/230 (12%)
Query: 39 RSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 98
+ +TQ K++ F PVD+ L + DY+++++ PMD T+K K++ Y + + A
Sbjct: 177 KKLMTQ-KYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLES---GSYTSPSDFAA 232
Query: 99 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ 158
DVRL F NAM YN VH MA L + FE +W + EK+ L
Sbjct: 233 DVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPI-------EKK---------LASA 276
Query: 159 LTQEAVQTNKAKELRSELNEV---DMQLENLRETVIQKCRKMSTEEKKNLGTALTRLS-- 213
T++ V+ ++A R + V D+ +E R+T + KM+ EE++ G L +S
Sbjct: 277 ATEKHVEVDRADSKRRKTPPVDRSDVSMECARQTEPE-TPKMTAEEREAFGNCLASISDE 335
Query: 214 -PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 262
P + + L+ ++N E+++D+ A S+ L+ LK V + L+
Sbjct: 336 LPPHIFELLQQCIDSNADLSGDG-EIEIDIHAVSDDLLFELKKHVDKYLQ 384
>gi|413937645|gb|AFW72196.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 488
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 114/230 (49%), Gaps = 28/230 (12%)
Query: 39 RSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 98
+ +TQ K++ F PVD+ L + DY+++++ PMD T+K K++ Y + + A
Sbjct: 177 KKLMTQ-KYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLES---GSYTSPSDFAA 232
Query: 99 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ 158
DVRL F NAM YN VH MA L + FE +W + EK+ L
Sbjct: 233 DVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPI-------EKK---------LASA 276
Query: 159 LTQEAVQTNKAKELRSELNEV---DMQLENLRETVIQKCRKMSTEEKKNLGTALTRLS-- 213
T++ V+ ++A R + V D+ +E R+T + KM+ EE++ G L +S
Sbjct: 277 ATEKHVEVDRADSKRRKTPPVDRSDVSMECARQTEPE-TPKMTAEEREAFGNCLASISDE 335
Query: 214 -PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 262
P + + L+ ++N E+++D+ A S+ L+ LK V + L+
Sbjct: 336 LPPHIFELLQQCIDSNADLSGDG-EIEIDIHAVSDDLLFELKKHVDKYLQ 384
>gi|350539095|ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
gi|10179602|gb|AAG13810.1|AF190891_1 PSTVd RNA-binding protein Virp1a [Solanum lycopersicum]
gi|10179604|gb|AAG13811.1|AF190892_1 PSTVd RNA-binding protein Virp1b [Solanum lycopersicum]
gi|10179606|gb|AAG13812.1|AF190893_1 PSTVd RNA-binding protein Virp1c [Solanum lycopersicum]
gi|10179608|gb|AAG13813.1|AF190894_1 PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
gi|13186132|emb|CAC33448.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
gi|13186134|emb|CAC33449.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
gi|13186136|emb|CAC33450.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
gi|13186138|emb|CAC33451.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
Length = 602
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 22 GCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 81
G K + + RQ + + +HK W F PVD E LGLHDY+++I++PMD T+K+
Sbjct: 183 GVKAIGTESMMKECRQILAKLMKHKNGWIFNIPVDAEALGLHDYHQIIKRPMDLGTVKSN 242
Query: 82 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ Y + E ADVRL F NA+ YN + D V+ A+ LL +FE+ + L
Sbjct: 243 L---AKNFYPSPFEFAADVRLTFNNALLYNPKTDQVNAFAEQLLGRFEDMFRPL 293
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%)
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
R+M+ EEK LG L L E + + ++I+ + N E++LD++A TLW L
Sbjct: 407 REMNMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELD 466
Query: 255 VFVQESLKAASRS 267
FV K S++
Sbjct: 467 RFVTNWKKMVSKT 479
>gi|413937647|gb|AFW72198.1| global transcription factor group E [Zea mays]
Length = 696
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 114/230 (49%), Gaps = 28/230 (12%)
Query: 39 RSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 98
+ +TQ K++ F PVD+ L + DY+++++ PMD T+K K++ Y + + A
Sbjct: 177 KKLMTQ-KYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLES---GSYTSPSDFAA 232
Query: 99 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ 158
DVRL F NAM YN VH MA L + FE +W + EK+ L
Sbjct: 233 DVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPI-------EKK---------LASA 276
Query: 159 LTQEAVQTNKAKELRSELNEV---DMQLENLRETVIQKCRKMSTEEKKNLGTALTRLS-- 213
T++ V+ ++A R + V D+ +E R+T + KM+ EE++ G L +S
Sbjct: 277 ATEKHVEVDRADSKRRKTPPVDRSDVSMECARQTEPE-TPKMTAEEREAFGNCLASISDE 335
Query: 214 -PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 262
P + + L+ ++N E+++D+ A S+ L+ LK V + L+
Sbjct: 336 LPPHIFELLQQCIDSNADLSGDG-EIEIDIHAVSDDLLFELKKHVDKYLQ 384
>gi|413937648|gb|AFW72199.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 728
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 114/230 (49%), Gaps = 28/230 (12%)
Query: 39 RSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 98
+ +TQ K++ F PVD+ L + DY+++++ PMD T+K K++ Y + + A
Sbjct: 193 KKLMTQ-KYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLES---GSYTSPSDFAA 248
Query: 99 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ 158
DVRL F NAM YN VH MA L + FE +W + EK+ L
Sbjct: 249 DVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPI-------EKK---------LASA 292
Query: 159 LTQEAVQTNKAKELRSELNEV---DMQLENLRETVIQKCRKMSTEEKKNLGTALTRLS-- 213
T++ V+ ++A R + V D+ +E R+T + KM+ EE++ G L +S
Sbjct: 293 ATEKHVEVDRADSKRRKTPPVDRSDVSMECARQTEPE-TPKMTAEEREAFGNCLASISDE 351
Query: 214 -PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 262
P + + L+ ++N E+++D+ A S+ L+ LK V + L+
Sbjct: 352 LPPHIFELLQQCIDSNADLSGDG-EIEIDIHAVSDDLLFELKKHVDKYLQ 400
>gi|30694987|ref|NP_199467.2| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
gi|327488241|sp|Q9LS28.2|GTE12_ARATH RecName: Full=Transcription factor GTE12; AltName:
Full=Bromodomain-containing protein GTE12; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E12
gi|26451383|dbj|BAC42791.1| unknown protein [Arabidopsis thaliana]
gi|332008014|gb|AED95397.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
Length = 494
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 41 FITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 100
F+ +H+ W F PVD + + DY+ VI+KPMD T+K+K+ Y N E ADV
Sbjct: 79 FLMEHRGGWLFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLK---NVYSNADEFAADV 135
Query: 101 RLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
RL F NAM YN ++VH +AK + E FE +W L+ K
Sbjct: 136 RLTFANAMHYNPLWNEVHTIAKEINEIFEVRWESLMKK 173
>gi|413937644|gb|AFW72195.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 494
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 111/227 (48%), Gaps = 27/227 (11%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ K++ F PVD+ L + DY+++++ PMD T+K K++ Y + + ADVR
Sbjct: 179 LMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKLES---GSYTSPSDFAADVR 235
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L F NAM YN VH MA L + FE +W + EK+ L T+
Sbjct: 236 LTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPI-------EKK---------LASAATE 279
Query: 162 EAVQTNKAKELRSELNEV---DMQLENLRETVIQKCRKMSTEEKKNLGTALTRLS---PE 215
+ V+ ++A R + V D+ +E R+T + KM+ EE++ G L +S P
Sbjct: 280 KHVEVDRADSKRRKTPPVDRSDVSMECARQTEPET-PKMTAEEREAFGNCLASISDELPP 338
Query: 216 DLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 262
+ + L+ ++N E+++D+ A S+ L+ LK V + L+
Sbjct: 339 HIFELLQQCIDSNADLSGDG-EIEIDIHAVSDDLLFELKKHVDKYLQ 384
>gi|47212213|emb|CAF94980.1| unnamed protein product [Tetraodon nigroviridis]
Length = 642
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD STI+ KMD + Y + DVRL+F N
Sbjct: 305 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTIRKKMDKGE---YSEPQSFATDVRLMFSN 361
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 362 CYKYNPPDHEVVAMARKLQDVFEMRFAKI 390
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY++VI+ PMD TIK ++ + Y
Sbjct: 20 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLCLADYHKVIKNPMDMGTIKKRL---ENNYY 76
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 77 WSASGAMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 121
>gi|222637108|gb|EEE67240.1| hypothetical protein OsJ_24385 [Oryza sativa Japonica Group]
Length = 536
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 36 RQARSFITQ---HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 92
RQ S + + HK W F PVD G+ DY++VI PMD T+K K+ K Y N
Sbjct: 115 RQCGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKRKLTSKQ---YSN 171
Query: 93 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
E ADVRL F NAMKYN +DVH +A L + F+ +W
Sbjct: 172 PYEFAADVRLTFSNAMKYNPPGNDVHGIADQLNKIFDSEW 211
>gi|8885596|dbj|BAA97526.1| unnamed protein product [Arabidopsis thaliana]
Length = 506
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 41 FITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 100
F+ +H+ W F PVD + + DY+ VI+KPMD T+K+K+ Y N E ADV
Sbjct: 91 FLMEHRGGWLFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLK---NVYSNADEFAADV 147
Query: 101 RLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
RL F NAM YN ++VH +AK + E FE +W L+ K
Sbjct: 148 RLTFANAMHYNPLWNEVHTIAKEINEIFEVRWESLMKK 185
>gi|57282320|emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Nicotiana tabacum]
Length = 617
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Query: 36 RQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 95
RQ + + +HK W F PVD + +GLHDY+++I++PMD T+K+ + Y E
Sbjct: 198 RQVLAKLMKHKSGWIFNTPVDAKAMGLHDYHQIIKRPMDLGTVKSNL---INNFYPTPFE 254
Query: 96 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEE 130
ADVRL F NA+ YN + D VH A+ LL +FE+
Sbjct: 255 FAADVRLTFNNALLYNPKTDQVHGFAEQLLARFED 289
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
R+MS EEK LG L L E + + ++I+ + N E++LD++A TLW L
Sbjct: 417 REMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELD 476
Query: 255 VFVQESLKAASRS 267
FV K S++
Sbjct: 477 RFVTNWKKMVSKT 489
>gi|115472285|ref|NP_001059741.1| Os07g0507700 [Oryza sativa Japonica Group]
gi|33146482|dbj|BAC79591.1| putative RING3 protein [Oryza sativa Japonica Group]
gi|113611277|dbj|BAF21655.1| Os07g0507700 [Oryza sativa Japonica Group]
gi|215717115|dbj|BAG95478.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 484
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 36 RQARSFITQ---HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 92
RQ S + + HK W F PVD G+ DY++VI PMD T+K K+ K Y N
Sbjct: 63 RQCGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKRKLTSKQ---YSN 119
Query: 93 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
E ADVRL F NAMKYN +DVH +A L + F+ +W
Sbjct: 120 PYEFAADVRLTFSNAMKYNPPGNDVHGIADQLNKIFDSEW 159
>gi|397609097|gb|EJK60217.1| hypothetical protein THAOC_19472 [Thalassiosira oceanica]
Length = 1735
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 78/128 (60%), Gaps = 4/128 (3%)
Query: 26 LSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 85
LS S L+ + + H+ W F PV+ LGL DY+++I+KPMD TI K++
Sbjct: 852 LSPSELKSKCGEILKSLQNHENGWVFSTPVNPVELGLDDYFDIIKKPMDLGTIGKKLE-- 909
Query: 86 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 145
G+ Y + E +DVRL F+NAMKYN+E+ VH MAK +KF+E + ++L K +++E
Sbjct: 910 QGS-YHSFDEFKSDVRLTFENAMKYNEEQTVVHEMAKGFKKKFDEDYKKML-KSLDKEHA 967
Query: 146 QEEEEAKA 153
+ ++A A
Sbjct: 968 ENSKKAHA 975
>gi|19171509|emb|CAC84085.1| hypothetical protein [Takifugu rubripes]
Length = 701
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD STI+ KMD + Y + DVRL+F N
Sbjct: 315 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTIRKKMDKGE---YNEPQSFATDVRLMFSN 371
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 372 CYKYNPPDHEVVAMARKLQDVFEMRFAKI 400
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY++VI+ PMD TIK ++ + Y
Sbjct: 36 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLCLADYHKVIKNPMDMGTIKKRL---ENNYY 92
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 93 WSASEAMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 137
>gi|17064912|gb|AAL32610.1| Unknown protein [Arabidopsis thaliana]
gi|20259928|gb|AAM13311.1| unknown protein [Arabidopsis thaliana]
Length = 503
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 108/232 (46%), Gaps = 39/232 (16%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLV 103
H +W F PVDV L + DY I+ PMD T+K + +G Y + E ADVRL
Sbjct: 190 HPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNL----ASGVYSSPHEFAADVRLT 245
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKW-----------LQLLPKVMEEEKRQEEEEAK 152
F +AM YN DVH+M L + FE +W +Q LP V E +E K
Sbjct: 246 FTDAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKLPPCSMQTLPAVTLEPN----DERK 301
Query: 153 AQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTE-EKKNLGTALTR 211
A + +V K +++ S +RE+V + + + TE E+ LG L
Sbjct: 302 AAI-------SVPPAKKRKMASP----------VRESVPEPVKPLMTEVERHRLGRQLES 344
Query: 212 LSPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLKVFVQESLK 262
L E ++ + ++N + A+ E+++D+D S+ L L+ + E ++
Sbjct: 345 LLDELPAHIIDFLKKHNSNGGEIAEDEIEIDIDVLSDEVLVTLRNLLDEYIQ 396
>gi|413921105|gb|AFW61037.1| hypothetical protein ZEAMMB73_947765 [Zea mays]
Length = 429
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 107/237 (45%), Gaps = 20/237 (8%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA-DVRLVFKNAMK 109
F PVDVEGL LHDY +I PMD T+K + G E +A DVRL F NA++
Sbjct: 158 FNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLT----AGRYPSHEAFAGDVRLTFNNALR 213
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKA 169
YN VH A +LL FE + + + E++RQ+ E Q V +
Sbjct: 214 YNPPDHHVHRYAGNLLASFEGMYKEAV--SWFEQQRQQLEPPMQPDLPPPPQLPVVSVPV 271
Query: 170 KELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENN- 228
+ RE R+M EEK+ L + L E + L+IV + N
Sbjct: 272 QAPPRMGGGGRRPKPKAREP---NKREMDEEEKQKLRVEIENLPEEKMLNVLQIVQKRNS 328
Query: 229 -PSFHATAQEVDLDMDAQSELTLWRLKVFV---QESLKAASRSS---GDMGGNNNNN 278
P+F T + V+LD D TLW L FV +++LK + R+S GD N +
Sbjct: 329 DPAF--TGEVVELDFDELDMETLWELDRFVVNWRKALKKSQRNSMVNGDAAAAVNGD 383
>gi|296421346|ref|XP_002840226.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636440|emb|CAZ84417.1| unnamed protein product [Tuber melanosporum]
Length = 825
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 49/259 (18%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H A+PF PVD L + DY+++I+KPMD STI K+ Y + + AD+RL+F
Sbjct: 477 HDTAFPFYVPVDPVALNIPDYFKIIKKPMDLSTISTKLKTNQ---YDSASDFEADIRLMF 533
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW----------------LQLLPKVMEEEKRQEE 148
N K+N VH K+L F++KW + + P V +E++
Sbjct: 534 SNCYKFNPSDQHVHKCGKALENIFDQKWAEKASYTRDNPGSHSPVSVSPPVEDEDEDMSG 593
Query: 149 EEAKAQ------LDMQL------------------TQEAVQTNKAKELRSELNEVDMQLE 184
+E++ Q L+ QL T A T ++K S +
Sbjct: 594 DESEDQEQNIRLLEQQLEAMKDQISAMKNGQKKKKTPPATSTKRSKGGSSRKGSLVSTAP 653
Query: 185 NLRETVIQKCRK-----MSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATA-QEV 238
+ +K ++ ++ E+K L + L + AL+++ EN P TA E+
Sbjct: 654 PANPSRPKKGKEKKVPYITMEQKTELSERINFLPTGKMAYALKMIRENMPDLGNTADDEI 713
Query: 239 DLDMDAQSELTLWRLKVFV 257
+LD+D TL++L +V
Sbjct: 714 ELDIDELDPQTLYKLHTYV 732
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 26 LSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 85
L+A+ +++ + RS + + K A PF PVD L + +Y+EVI PMD T++ K++ K
Sbjct: 241 LTATQIKYLLVVIRS-LRRTKDARPFTMPVDPIKLNVPNYFEVITNPMDLQTMEKKLNNK 299
Query: 86 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 129
+ Y + R+ AD L+ N + +N V + + FE
Sbjct: 300 E---YSSSRDFLADFNLILTNCVTFNGREHPVSENGRVMKAVFE 340
>gi|224121914|ref|XP_002318704.1| global transcription factor group [Populus trichocarpa]
gi|222859377|gb|EEE96924.1| global transcription factor group [Populus trichocarpa]
Length = 613
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 109/217 (50%), Gaps = 11/217 (5%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H++ W F PVDV + + DY+ +I+ PMD T+K+++ + Y + ADVR
Sbjct: 105 LMTHQFGWIFNTPVDVVKMNIPDYFTIIKHPMDLGTVKSRIISGE---YSSPLGFAADVR 161
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL---LPKVMEEEKRQEEEEAKAQLDMQ 158
L F NAMKYN +D H MA++L + FE +W + +P + E + + +++
Sbjct: 162 LTFANAMKYNPPGNDFHFMAETLSKFFEVRWKVIEKKIPVTADVEPVPSRADVRMEMETT 221
Query: 159 LTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLC 218
E T L+ + ++ ++ I+K M+ EE++ L L L E
Sbjct: 222 AHIEKETTTDTPPLKKK--KITPSDNKVKPGPIRKV--MTNEERQKLSMELEALLAELPE 277
Query: 219 KALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLK 254
+E + E++ + T + E+++D+DA + L+ L+
Sbjct: 278 NIIEFLKEHSGNAGQTGEDEIEIDIDALGDDILFNLR 314
>gi|125560007|gb|EAZ05455.1| hypothetical protein OsI_27669 [Oryza sativa Indica Group]
Length = 791
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+H+WA PF+ PVDV L + DY+++I+KPMD TI+ K+ + Y + ADVRL
Sbjct: 175 KHQWAGPFLAPVDVVQLNIPDYFDIIKKPMDLGTIEKKL---NAGMYSTPWDFAADVRLT 231
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
F NA+ YN +DV++M K+L FE +W
Sbjct: 232 FDNAVTYNPVGNDVNLMGKTLKCIFETRW 260
>gi|42407711|dbj|BAD08859.1| putative bromodomain-containing protein [Oryza sativa Japonica
Group]
gi|125602058|gb|EAZ41383.1| hypothetical protein OsJ_25901 [Oryza sativa Japonica Group]
Length = 791
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+H+WA PF+ PVDV L + DY+++I+KPMD TI+ K+ + Y + ADVRL
Sbjct: 175 KHQWAGPFLAPVDVVQLNIPDYFDIIKKPMDLGTIEKKL---NAGMYSTPWDFAADVRLT 231
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
F NA+ YN +DV++M K+L FE +W
Sbjct: 232 FDNAVTYNPVGNDVNLMGKTLKCIFETRW 260
>gi|226493721|ref|NP_001146156.1| uncharacterized protein LOC100279725 [Zea mays]
gi|219885991|gb|ACL53370.1| unknown [Zea mays]
gi|413921106|gb|AFW61038.1| hypothetical protein ZEAMMB73_947765 [Zea mays]
Length = 484
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 109/242 (45%), Gaps = 21/242 (8%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA-DVRLVF 104
K W F PVDVEGL LHDY +I PMD T+K + G E +A DVRL F
Sbjct: 154 KSVW-FNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLT----AGRYPSHEAFAGDVRLTF 208
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAV 164
NA++YN VH A +LL FE + + + E++RQ+ E Q V
Sbjct: 209 NNALRYNPPDHHVHRYAGNLLASFEGMYKEAV--SWFEQQRQQLEPPMQPDLPPPPQLPV 266
Query: 165 QTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIV 224
+ + RE R+M EEK+ L + L E + L+IV
Sbjct: 267 VSVPVQAPPRMGGGGRRPKPKAREP---NKREMDEEEKQKLRVEIENLPEEKMLNVLQIV 323
Query: 225 AENN--PSFHATAQEVDLDMDAQSELTLWRLKVFV---QESLKAASRSS---GDMGGNNN 276
+ N P+F T + V+LD D TLW L FV +++LK + R+S GD N
Sbjct: 324 QKRNSDPAF--TGEVVELDFDELDMETLWELDRFVVNWRKALKKSQRNSMVNGDAAAAVN 381
Query: 277 NN 278
+
Sbjct: 382 GD 383
>gi|238481625|ref|NP_001154792.1| nuclear protein X1 [Arabidopsis thaliana]
gi|238481627|ref|NP_001154793.1| nuclear protein X1 [Arabidopsis thaliana]
gi|10177441|dbj|BAB10737.1| unnamed protein product [Arabidopsis thaliana]
gi|50253452|gb|AAT71928.1| At5g63330 [Arabidopsis thaliana]
gi|60543335|gb|AAX22265.1| At5g63330 [Arabidopsis thaliana]
gi|332010350|gb|AED97733.1| nuclear protein X1 [Arabidopsis thaliana]
gi|332010351|gb|AED97734.1| nuclear protein X1 [Arabidopsis thaliana]
Length = 477
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 14/224 (6%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
HK WPF PVD L + DY+ VI+ PMD TI++++ + Y + + ADVRL F
Sbjct: 175 HKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGE---YSSPLDFAADVRLTF 231
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAV 164
N++ YN + H MA+ + + FE W + K+ + + A L+ ++ E
Sbjct: 232 SNSIAYNPPGNQFHTMAQGISKYFESGWKSIEKKIPMSKPPVIPLTSSASLESEIPFEVA 291
Query: 165 QTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIV 224
K + + +N+ +++E + M+ EKK LG L L + K +++
Sbjct: 292 PMRKKE---AAMNDNKLRVEPAKLV-------MTDGEKKKLGQDLMALEEDFPQKIADLL 341
Query: 225 AENNPSFHATAQ-EVDLDMDAQSELTLWRLKVFVQESLKAASRS 267
E + S + + E+++D++A S+ L+ ++ + + L+ +S
Sbjct: 342 REQSGSDGQSGEGEIEIDIEALSDEILFMVRKLLDDYLREKKKS 385
>gi|116309916|emb|CAH66950.1| B0809H07.5 [Oryza sativa Indica Group]
Length = 337
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIK-NKMDGKDGTGYRNVREIYADVRLVFKNAMK 109
F PV+V+ LGL DY+ VI+ PMD T++ N G+ Y + + AD+RL F NA++
Sbjct: 21 FNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGR----YPSHDDFAADIRLTFSNALR 76
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKA 169
YN +VH A LL FE+ + + +E K E ++ + Q
Sbjct: 77 YNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVPPPELPPAKAPAQ---- 132
Query: 170 KELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNP 229
++ V M+ RE R+M+ EEK L L L E + L+IV + N
Sbjct: 133 --VKPRAGNVKMRKPKAREP---NKREMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNG 187
Query: 230 SFHATAQEVDLDMDAQSELTLWRLKVFVQESLKA--ASRSSGDMGGNN 275
+ E++LD+D T W+L FV + KA SR + + G N
Sbjct: 188 NPELVGGEIELDIDEMDVETQWKLDRFVNKFKKALNKSRRAAIVNGEN 235
>gi|290985307|ref|XP_002675367.1| bromodomain-containing protein [Naegleria gruberi]
gi|284088963|gb|EFC42623.1| bromodomain-containing protein [Naegleria gruberi]
Length = 718
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 125/262 (47%), Gaps = 44/262 (16%)
Query: 41 FITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 100
+ +HKW+WPF +PVD L + DY++VI+ PMD T++ K++ + Y +V + DV
Sbjct: 193 IVKKHKWSWPFNNPVDPVQLQIPDYFDVIKNPMDLGTVEKKVNNNE---YMDVYQFLDDV 249
Query: 101 RLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV---MEEEKRQEEEEAKAQLDM 157
R+++ N YN D++ MAK + + F EK+++ + +V ++E AQ
Sbjct: 250 RVIWSNCYLYNPVDSDIYKMAKEVEKYFNEKYVKTVGEVSYDTTTTVQEEVTSPSAQSST 309
Query: 158 QLTQEAV-----------QTNKAKELRSELNEVDMQLENLRETVIQK------------- 193
T + T+ K + + +E + L+ + ET I++
Sbjct: 310 ITTPASTPSTSKNKKSNGTTSSTKGRKKKTSETETNLDLMIETPIKEQVTTPSTTSKSKA 369
Query: 194 -------------CRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ-EVD 239
+ MS +KK L T + L + L + + I+ PS + ++ E++
Sbjct: 370 SSTKKTTTNKKTKPKTMSYNQKKELSTNIGSLEGDKLAEVVRIIQSKAPSASSKSETEIE 429
Query: 240 LDMDAQSELTLWRLKVFVQESL 261
+D+D + TL+ L+ FV+++L
Sbjct: 430 IDLDKLDDATLFELEAFVEKNL 451
>gi|38344163|emb|CAE03494.2| OSJNBa0053K19.2 [Oryza sativa Japonica Group]
gi|38345711|emb|CAD41833.2| OSJNBb0085C12.13 [Oryza sativa Japonica Group]
Length = 299
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 102/218 (46%), Gaps = 14/218 (6%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIK-NKMDGKDGTGYRNVREIYADVRLVFKNAMK 109
F PV+V+ LGL DY+ VI+ PMD T++ N G+ Y + + AD+RL F NA++
Sbjct: 21 FNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGR----YPSHDDFAADIRLTFSNALR 76
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKA 169
YN +VH A LL FE+ + + +E K E ++ + Q
Sbjct: 77 YNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVPPPELPPAKAPAQ---- 132
Query: 170 KELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNP 229
++ V M+ RE R+M+ EEK L L L E + L+IV + N
Sbjct: 133 --VKPRAGNVKMRKTKAREP---NKREMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNG 187
Query: 230 SFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRS 267
+ E++LD+D T W L FV + KA ++S
Sbjct: 188 NPELVGGEIELDIDEMDVETQWELDRFVNKFKKALNKS 225
>gi|58865638|ref|NP_001012031.1| bromodomain testis-specific protein [Rattus norvegicus]
gi|50927337|gb|AAH78999.1| Brdt protein [Rattus norvegicus]
gi|165971045|gb|AAI58631.1| Brdt protein [Rattus norvegicus]
Length = 326
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF R + +H ++WPF PVD L L DYY +IE PMD STIK +++ + Y
Sbjct: 31 LQFLQRVVLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLENR---YY 87
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ VMA++L + F +K Q+
Sbjct: 88 EKASECVGDFNTMFSNCYLYNKPGDDIVVMAQALEKLFMQKLSQM 132
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 28/33 (84%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 79
+AWPF +PVDV+ LGLH+YY++++ PMD TIK
Sbjct: 290 YAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIK 322
>gi|66800045|ref|XP_628948.1| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
gi|74896738|sp|Q54BA2.1|Y3800_DICDI RecName: Full=Ankyrin repeat, bromo and BTB domain-containing
protein DDB_G0293800
gi|60462310|gb|EAL60533.1| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
Length = 806
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K + F PVD G+ DY++VI+ PMD TIK K+D GY +++ ADVRL+F+
Sbjct: 536 KTSLAFQRPVDPLAEGIPDYFDVIKHPMDLGTIKGKLDN---NGYSTIKDFAADVRLMFE 592
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
NA+ YN + V AK+LL F++K+LQ P
Sbjct: 593 NALTYNADSSPVWKHAKTLLNAFDQKFLQNFP 624
>gi|67523055|ref|XP_659588.1| hypothetical protein AN1984.2 [Aspergillus nidulans FGSC A4]
gi|40744729|gb|EAA63885.1| hypothetical protein AN1984.2 [Aspergillus nidulans FGSC A4]
gi|259487345|tpe|CBF85947.1| TPA: protein involved in transcription initiation at
TATA-containing promoters (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 808
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 115/257 (44%), Gaps = 46/257 (17%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRL 102
+ +A+PF +PVD L + Y+ +I+KPMD ST+ +K++ TG Y N +E D+R
Sbjct: 472 HYSYAFPFYYPVDPVALNIPTYHSIIKKPMDLSTVSSKLN----TGQYENAKEFEMDIRQ 527
Query: 103 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQE 162
+ KN K+N + D +++ + L E F KW Q + E E+ A + + E
Sbjct: 528 IMKNCFKFNLKGDPIYMAGEKLEEVFNAKWAQKESYLAAHEPPPEQHSAASSSEESDEDE 587
Query: 163 AVQTNKAKE----LRSELNEVDMQLENLRETVI--------------------------- 191
++ E L+ ++ ++ QLE + +
Sbjct: 588 EGSDDEEDEAINRLKQQIADMSQQLEAMTQKKKKTPPKKAKSKKKDSKKVGATGAGRKDK 647
Query: 192 ---------QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ-EVDLD 241
+K R +S +K+ + ++ L + + +AL+I+ N P+ T + E++LD
Sbjct: 648 KGGGKSSKPEKPRYVSYHDKQIISNGISSLPDKKMQEALKIIQSNVPALKGTQETEIELD 707
Query: 242 MDAQSELTLWRLKVFVQ 258
+D LW L FV+
Sbjct: 708 IDELPNDVLWMLLKFVK 724
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 32 QFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYR 91
+F V+ +S H + + PVD + + Y++VI++PMD TI+ K+ Y
Sbjct: 264 RFLVKAIQSLKRLHDARF-YKEPVDPVKMAIPTYFDVIKEPMDLGTIEQKL---KNNVYT 319
Query: 92 NVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
+ + ++ D L+ +NA +N V V K L FE++ L LPK E E
Sbjct: 320 SPQSVFNDFELMVRNAHVFNGPDHIVSVEGKRLQATFEKQMLN-LPKADEVE 370
>gi|57282322|emb|CAD43287.1| bromodomain-containing RNA-binding protein 2 [Nicotiana tabacum]
Length = 616
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVD E LGLHDY+++I++P D T K+ + Y E ADVR
Sbjct: 203 LMKHKSGWIFNTPVDAEALGLHDYHQIIKRPXDLGTXKSNL---SNNFYPTPFEFAADVR 259
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEE 130
L F NA+ YN + D VH A+ LL +FE+
Sbjct: 260 LTFNNALLYNPKTDQVHGFAEQLLARFED 288
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
R+MS EEK LG L L E + + ++I+ + N E++LD++A TLW L
Sbjct: 416 REMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELD 475
Query: 255 VFVQESLKAASRS 267
FV K S++
Sbjct: 476 RFVTNWKKMVSKT 488
>gi|388581469|gb|EIM21777.1| Bromodomain-containing protein [Wallemia sebi CBS 633.66]
Length = 596
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 108/235 (45%), Gaps = 28/235 (11%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+A PF PVD LGL DY +V+++PMD ST+ K++ D Y + + D++L+F N
Sbjct: 270 YASPFYDPVDYIALGLPDYPQVVQQPMDLSTVGQKLNLGD---YEGPSDFFGDMKLMFGN 326
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLP-----KVMEEEKRQEEEEAKAQL-DMQ-- 158
KYN VH + F+EKW QL P ++ ++E + + Q+ DMQ
Sbjct: 327 CYKYNPPGTPVHEAGRQTEAVFDEKWTQLPPLSTPLEISDDENSDAVKALQRQIEDMQKS 386
Query: 159 LTQEAVQTNKAKELRSELNEVDMQLENLRETVIQ--KCRKMSTEE--------------K 202
LT + A E S + T Q + R+ S +E K
Sbjct: 387 LTDIKKKGTGAPERVSTGGGGSGRGGKRGSTGGQVGRPRRKSYDEDDENYQIPEITFDMK 446
Query: 203 KNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 257
K L + +L + L KA++I+ E + E++LD+D TL +L +FV
Sbjct: 447 KELAGKIQQLEGDQLDKAIKIIYETL-DLDNNSDEIELDIDVLPVKTLQKLYMFV 500
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 34 FVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD----GKDGTG 89
FV + + K A PF+ PVD +G+ Y EVI +P D T+ K+ ++G G
Sbjct: 87 FVSSLVKQLKKMKAAVPFLSPVDYISMGIPHYPEVISEPSDLGTVDRKVQKTIKAEEG-G 145
Query: 90 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
Y N + DVR +F+N +N V M K + E F+++ ++ P
Sbjct: 146 YYNFNDWETDVRRIFRNTEWFNGHEHPVSKMGKQVEESFDKQLKKMPP 193
>gi|384493798|gb|EIE84289.1| hypothetical protein RO3G_08999 [Rhizopus delemar RA 99-880]
Length = 569
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 120/276 (43%), Gaps = 51/276 (18%)
Query: 34 FVRQARSFITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
F QA + + K+ +PF+HPVDV GL + DY ++++ PMD STI+ K++ DG Y
Sbjct: 236 FCAQALKELKKTKYRDINYPFLHPVDVVGLNIPDYVDIVKHPMDLSTIEKKLN--DGE-Y 292
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV----------- 139
+ D+RL+F N YN VH M + L + F++KW Q PK
Sbjct: 293 AEPEDFENDIRLMFNNCYLYNPPSLPVHKMGRQLEKAFDDKWAQRPPKTEPTPLVDDAPE 352
Query: 140 --------------MEEEKRQEEEEAKAQLDMQLTQEAVQTNK--AKELRSELNEVDMQL 183
++K E E A + Q+ Q K A++ R N
Sbjct: 353 EEFDEVVEEDDSEDERDQKIAELERHIATISQQIASIKSQKRKKGAEKPRRTSNVNKTIK 412
Query: 184 ENLRETVIQKCRKMST----------------EEKKNLGTALTRLSPEDLCKALEIVAEN 227
E +K R+ ST ++KK+L + L+ + L ++I+ +
Sbjct: 413 EKKPSAPKEKRRRTSTTNKKKEKKEELPEFTFDQKKDLSERINNLTGDRLNTVVDIIRSS 472
Query: 228 NPSFHATAQ-EVDLDMDAQSELTLWRLKVFVQ-ESL 261
P+ Q E+ LD+D+ TL RL FV ESL
Sbjct: 473 MPNLDGQGQEEIVLDIDSLDRSTLHRLHEFVTGESL 508
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +H+ A PF+ PVD L + DY ++I PMD +T+ K++ Y +V + DVR
Sbjct: 68 LKKHRDAAPFLQPVDYVKLNIPDYPKIIRHPMDLATVDKKLNSGQ---YDSVDQWIYDVR 124
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
LVF N K+N V ++ +++ FE+ Q+ P
Sbjct: 125 LVFNNCFKFNGPEAMVSMLCQNVESAFEKSLRQMPP 160
>gi|125591682|gb|EAZ32032.1| hypothetical protein OsJ_16210 [Oryza sativa Japonica Group]
Length = 515
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIK-NKMDGKDGTGYRNVREIYADVRLVFKNAMK 109
F PV+V+ LGL DY+ VI+ PMD T++ N G+ Y + + AD+RL F NA++
Sbjct: 21 FNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGR----YPSHDDFAADIRLTFSNALR 76
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKA 169
YN +VH A LL FE+ + + +E K E ++ + Q
Sbjct: 77 YNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVPPPELPPAKAPAQ---- 132
Query: 170 KELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNP 229
++ V M+ RE R+M+ EEK L L L E + L+IV + N
Sbjct: 133 --VKPRAGNVKMRKTKAREP---NKREMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNG 187
Query: 230 SFHATAQEVDLDMDAQSELTLWRLKVFVQESLKA--ASRSSGDMGGNN 275
+ E++LD+D T W L FV + KA SR + + G N
Sbjct: 188 NPELVGGEIELDIDEMDVETQWELDRFVNKFKKALNKSRRAAIVNGEN 235
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
R+M+ EEK L L L E + L+IV + N + E++LD+D T W L
Sbjct: 313 REMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELD 372
Query: 255 VFVQESLKA--ASRSSGDMGGNN 275
FV + KA SR + + G N
Sbjct: 373 RFVNKFKKALNKSRRAAIVNGEN 395
>gi|297723469|ref|NP_001174098.1| Os04g0622700 [Oryza sativa Japonica Group]
gi|255675790|dbj|BAH92826.1| Os04g0622700 [Oryza sativa Japonica Group]
Length = 355
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIK-NKMDGKDGTGYRNVREIYADVRLVFKNAMK 109
F PV+V+ LGL DY+ VI+ PMD T++ N G+ Y + + AD+RL F NA++
Sbjct: 21 FNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGR----YPSHDDFAADIRLTFSNALR 76
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKA 169
YN +VH A LL FE+ + + +E K E ++ + Q
Sbjct: 77 YNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVPPPELPPAKAPAQ---- 132
Query: 170 KELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNP 229
++ V M+ RE R+M+ EEK L L L E + L+IV + N
Sbjct: 133 --VKPRAGNVKMRKTKAREP---NKREMTLEEKNLLRVGLESLPEEKMHNVLQIVRKRNG 187
Query: 230 SFHATAQEVDLDMDAQSELTLWRLKVFVQESLKA--ASRSSGDMGGNN 275
+ E++LD+D T W L FV + KA SR + + G N
Sbjct: 188 NPELVGGEIELDIDEMDVETQWELDRFVNKFKKALNKSRRAAIVNGEN 235
>gi|363736907|ref|XP_003641771.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific protein
[Gallus gallus]
Length = 995
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 21 GGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKN 80
GC+ + LQ+ R + +H ++WPF PVD L L DYY +I+KPMD STIK
Sbjct: 25 SGCQT---NQLQYLQRVVMKAMWRHNFSWPFHQPVDAAALNLPDYYSIIKKPMDLSTIKK 81
Query: 81 KMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK-- 138
++ + Y E D + +F N YN DD+ MA+ L + F +K Q+ P+
Sbjct: 82 RL---EHNYYTKSAECIDDFKTMFLNCYIYNKPGDDIVFMAQELEKVFMQKIAQMPPEEI 138
Query: 139 -VMEEEKRQE 147
+ ++ KR+E
Sbjct: 139 LIPDKGKRKE 148
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +A PF+ DV L + + + P D TIK KMD + YR+++E D
Sbjct: 295 FSKKHSAYARPFLRSADVVSFSLGEKKGITKCPTDLGTIKKKMDNFE---YRDIQEFATD 351
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N K N +V MAK L + FE + ++
Sbjct: 352 VRLMFMNCYKRNSPDHEVVAMAKKLQDVFETHFAKI 387
>gi|195167198|ref|XP_002024421.1| GL14811 [Drosophila persimilis]
gi|194107794|gb|EDW29837.1| GL14811 [Drosophila persimilis]
Length = 678
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF ++ I +H +AWPF PVD + L L DY+++I++PMD TIK +++ Y
Sbjct: 39 LQFLIKTVMKMIWKHHFAWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY---Y 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 150
+ +E D +F N YN +DV VMA++L + F +K ++ +PK EE E
Sbjct: 96 WSAKETIHDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IETMPK---EELELEPAT 151
Query: 151 AKA 153
AK
Sbjct: 152 AKG 154
>gi|357130613|ref|XP_003566942.1| PREDICTED: transcription factor GTE4-like [Brachypodium distachyon]
Length = 215
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ QH AW F PVDV LG+ DYY +I PMD T+ +++ + Y + R DVR
Sbjct: 44 LLQHDDAWVFDKPVDVYELGISDYYTMIPDPMDLGTVSSRL---NRLRYADPRAFAEDVR 100
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW----LQLLPKVMEEEKRQEEEEAKAQLDM 157
L F+NAM +NDE D V+ A L FE W ++L P +E K+ +EE +
Sbjct: 101 LTFRNAMTFNDEDDAVYKSAAELSRIFESGWASILVELTPPQLERNKKLKEEMTRLPASW 160
Query: 158 QLTQEAVQTNKAKELRSELNEV 179
Q A+ KE+ L EV
Sbjct: 161 QGKAVAIM----KEIGGCLQEV 178
>gi|384499244|gb|EIE89735.1| hypothetical protein RO3G_14446 [Rhizopus delemar RA 99-880]
Length = 570
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 5 LRSSSKMHFIGKKLLEGGCKNLSASLLQFFVRQARSFITQHK------WAWPFMHPVDVE 58
L + K H K + E ++ L + + S I + K WPF PVD
Sbjct: 124 LEKAFKKHLAKKTVSEKQPSTVTTLLSESEYKHCASAIKEFKKPKYAHLTWPFERPVDAA 183
Query: 59 GLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVH 118
G DYY++I+ PMD STI+NK + Y N + Y D +L+F N KYN +VH
Sbjct: 184 AWGATDYYDIIQHPMDMSTIENKFKNAE---YTNEDQFYDDYKLMFSNCYKYNPPHHEVH 240
Query: 119 VMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKE 171
++ K E F++ W ++ K E +++ + + T++ VQ + E
Sbjct: 241 LLGKKFEEDFDKHWNKIHDKPKERAVKKQRVDQDVMITPPTTEDEVQVKQNTE 293
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 34 FVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 93
V + + + +H A PF+ PVD + DY+++I+ PMD STI+ K++ Y++
Sbjct: 39 LVTETLTKLMKHPCAGPFLQPVDPVFFNIPDYFDIIKHPMDLSTIQTKLN-----NYQSK 93
Query: 94 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKF 128
E ADV L+ N YN+ D V A+ L + F
Sbjct: 94 EEFIADVELMLDNCYLYNNATDPVCDQARELEKAF 128
>gi|392885383|ref|NP_491384.3| Protein BET-1, isoform a [Caenorhabditis elegans]
gi|351060603|emb|CCD68309.1| Protein BET-1, isoform a [Caenorhabditis elegans]
Length = 853
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
++AWPF PVD E LGLHDY+++I++PMD ++K KM + Y+ + DVRL+
Sbjct: 279 QEFAWPFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKM---ESGAYKEPSDFEHDVRLML 335
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+N YN D VH E F+ +W +L
Sbjct: 336 RNCFLYNPVGDPVHSFGLRFQEVFDRRWAEL 366
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 11/106 (10%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+HK WPF PVD L + Y+E + +PMD TI+N++ T Y +E D+ V
Sbjct: 57 KHKHVWPFQKPVDAVALCIPLYHERVARPMDLKTIENRL---KSTYYTCAQECIDDIETV 113
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 149
F+N +N + DDV +MA+++ E ++ K +E+ R+E +
Sbjct: 114 FQNCYTFNGKEDDVTIMAQNVHE--------VIKKSLEQAPREEHD 151
>gi|66826485|ref|XP_646597.1| bromodomain-containing protein [Dictyostelium discoideum AX4]
gi|74858341|sp|Q55C84.1|Y0170_DICDI RecName: Full=Bromodomain-containing protein DDB_G0270170
gi|60474498|gb|EAL72435.1| bromodomain-containing protein [Dictyostelium discoideum AX4]
Length = 1578
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 64/108 (59%), Gaps = 10/108 (9%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+H+ + PF+ VD LG+ DY++VI+ PMD TIK + G GY + + D RLV
Sbjct: 753 EHQHSPPFLVAVDPYALGILDYFDVIKHPMDLGTIKASLIGG---GYDTIDKFAEDCRLV 809
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL-------PKVMEEEK 144
F NA YN + VH+MA+SL + FE+ + ++L PK +++EK
Sbjct: 810 FSNAKTYNPSTNPVHIMAQSLEDVFEKGFPKVLIEPPSPPPKNVDQEK 857
>gi|326925069|ref|XP_003208744.1| PREDICTED: bromodomain testis-specific protein-like [Meleagris
gallopavo]
Length = 824
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 9/130 (6%)
Query: 22 GCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 81
GC+ + LQ+ R + +H ++WPF PVD L L DYY +I+KPMD STIK +
Sbjct: 26 GCQT---NQLQYLQRVVMRAMWRHNFSWPFHQPVDAAALNLPDYYSIIKKPMDLSTIKKR 82
Query: 82 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK--- 138
+ + Y E D + +F N YN DD+ MA+ L + F +K Q+ P+
Sbjct: 83 L---EHNYYTKAAECIDDFKTMFLNCYIYNKPGDDIVFMAQELEKVFMQKIAQMPPEEIL 139
Query: 139 VMEEEKRQEE 148
+ ++ KR+E+
Sbjct: 140 IPDKGKRKEK 149
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF+ DV L + + + P D TIK KMD + YR+++E DVRL+F N
Sbjct: 302 YAWPFLKSADVVSFSLGEKKGITKCPADLGTIKKKMDNFE---YRDIQEFATDVRLMFMN 358
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
K+N +V MAK L + FE + ++
Sbjct: 359 CYKHNSPDHEVVAMAKKLQDVFETHFAKI 387
>gi|159475920|ref|XP_001696062.1| Ring3 protein [Chlamydomonas reinhardtii]
gi|158275233|gb|EDP01011.1| Ring3 protein [Chlamydomonas reinhardtii]
Length = 798
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 22/220 (10%)
Query: 41 FITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 100
++ + K A F PVD G+ DY + I PMD TIK K+ + Y + RE AD+
Sbjct: 104 YLLKKKNAQVFGRPVDPVRDGVPDYLKFILHPMDLGTIKAKLRER---RYNDPREFAADM 160
Query: 101 RLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLT 160
RLV+ N YN V L + FE KW + ++ + LD ++
Sbjct: 161 RLVWSNCRTYNQIGTSVRQWGDQLSDDFERKWADYNCEQRWDDLMATRDPQNVSLDRRI- 219
Query: 161 QEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKA 220
+ A++L +N V + E R M++ EK+ L AL+ L + L
Sbjct: 220 -----ASSARQLLQRVNSVQLMQE------ADPTRAMTSVEKRKLSIALSELQGDQLADV 268
Query: 221 LEIVAEN----NPSFHATAQEVDLDMDAQSELTLWRLKVF 256
L I+AEN NP +E++LD+D TLWRL+ +
Sbjct: 269 LNIIAENLKDVNPDDD---EEIELDVDQLDNTTLWRLREY 305
>gi|32564850|ref|NP_871879.1| Protein BET-1, isoform b [Caenorhabditis elegans]
gi|351060598|emb|CCD68304.1| Protein BET-1, isoform b [Caenorhabditis elegans]
Length = 765
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
++AWPF PVD E LGLHDY+++I++PMD ++K KM + Y+ + DVRL+
Sbjct: 279 QEFAWPFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKM---ESGAYKEPSDFEHDVRLML 335
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+N YN D VH E F+ +W +L
Sbjct: 336 RNCFLYNPVGDPVHSFGLRFQEVFDRRWAEL 366
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 11/106 (10%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+HK WPF PVD L + Y+E + +PMD TI+N++ T Y +E D+ V
Sbjct: 57 KHKHVWPFQKPVDAVALCIPLYHERVARPMDLKTIENRL---KSTYYTCAQECIDDIETV 113
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 149
F+N +N + DDV +MA+++ E ++ K +E+ R+E +
Sbjct: 114 FQNCYTFNGKEDDVTIMAQNVHE--------VIKKSLEQAPREEHD 151
>gi|356513665|ref|XP_003525531.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 739
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 111/216 (51%), Gaps = 19/216 (8%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H++ F PVD+ + DY+ +I+ PMD T+K+K+ + Y ++ + ADVR
Sbjct: 181 VMSHQFGKVFDKPVDIVKWNIPDYFTIIKHPMDLGTVKSKLISCE---YTSLMDFAADVR 237
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L F NAM YN +DVHVMA++L + FE +W + + K++ + E + +
Sbjct: 238 LTFSNAMSYNPPGNDVHVMAETLSKYFETRW-KPIEKILAIDDVPSEPSKPTTC---IEK 293
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKAL 221
+ K+ + N +++ E ++ R M+ EEK+ L L E +
Sbjct: 294 SEIVDPPVKKKKITPNGTNVKPEPIK-------RIMTGEEKQKLSMELDASVVELPENII 346
Query: 222 EIVAENNPSFHATA---QEVDLDMDAQSELTLWRLK 254
+ + E S++A+ E+++D+DA S+ TL++L+
Sbjct: 347 DFLKEQ--SYNASQINDDEIEIDIDALSDDTLFKLR 380
>gi|301112310|ref|XP_002905234.1| histone acetyltransferase, putative [Phytophthora infestans T30-4]
gi|262095564|gb|EEY53616.1| histone acetyltransferase, putative [Phytophthora infestans T30-4]
Length = 2294
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADV 100
+ +HK+ W F PVD L + +Y++++ KPMD T+K K++ G Y++ E DV
Sbjct: 1306 MMEHKFGWVFNTPVDPVALNIPNYFKIVRKPMDLGTVKKKLE----LGIYKHTEEFAYDV 1361
Query: 101 RLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQL 155
R F+NAM+YN E DV+ +AK +L F + +++ ++ +E E+E+ +L
Sbjct: 1362 RTTFQNAMQYNSEDQDVYSLAKDMLADFNSEMRKVVAEIDVDETAAREKESSCRL 1416
>gi|121707746|ref|XP_001271928.1| transcription regulator BDF1, putative [Aspergillus clavatus NRRL
1]
gi|119400076|gb|EAW10502.1| transcription regulator BDF1, putative [Aspergillus clavatus NRRL
1]
Length = 840
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 52/262 (19%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLV 103
+ WA PF PVD L + Y+ +I+KPMD ST+++K+ TG Y N +E DVR +
Sbjct: 499 YTWAAPFYFPVDPVALNIPTYHSIIKKPMDLSTVQSKLK----TGQYENAKEFEVDVRQI 554
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ----------------------------- 134
FKN K+N D ++ + E FE KW Q
Sbjct: 555 FKNCFKFNIPGDPTYMAGQRFQEIFENKWAQKSRYLEAHEPHPEHQSVSSSEEESGEEEE 614
Query: 135 -----------LLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKA--KELRSELNEVDM 181
+L K +EE RQ E + + + V +KA K+ + V +
Sbjct: 615 DSDYHDNEKLSMLQKQIEEMSRQVEAITQKKKKTPPGLKKVGKSKAGKKDSKKLATAVGL 674
Query: 182 QLENLRETV----IQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ- 236
++ + +V +K R ++ EK+ + ++ L + + +AL+I+ N P+ T +
Sbjct: 675 SKKDKKTSVKPSKPEKQRYVTYHEKQIISNGISSLPDKKMQEALKIIQSNVPALKGTQET 734
Query: 237 EVDLDMDAQSELTLWRLKVFVQ 258
E++LD+D L L FV+
Sbjct: 735 EIELDIDELPNDVLLMLLKFVK 756
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
F PVD + + Y ++I+ PMD TI+ K+ + Y+ + + D L+ +NA+ +
Sbjct: 308 FREPVDPIKMNIPHYPQIIKHPMDLGTIERKLKNNE---YKAAQAVVNDFHLMVQNAVTF 364
Query: 111 NDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
N V L FE++ + LPK E E
Sbjct: 365 NGPDHLVSQEGMKLQGTFEKQMVN-LPKPDEVE 396
>gi|47201045|emb|CAF89147.1| unnamed protein product [Tetraodon nigroviridis]
Length = 378
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I++PMD STIK KMD ++ Y + ++ ADVRL+F N
Sbjct: 268 YAWPFYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMDNRE---YLDSQQFAADVRLMFSN 324
Query: 107 AMKYNDE 113
KYN
Sbjct: 325 CYKYNPP 331
>gi|218200605|gb|EEC83032.1| hypothetical protein OsI_28113 [Oryza sativa Indica Group]
Length = 481
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 96/227 (42%), Gaps = 11/227 (4%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD-GKDGTGYRNVREIYADVRLVFKNAMK 109
F PVDVE L LHDY+ +I PMD T+K + G+ Y + ADVRL F NA++
Sbjct: 157 FNSPVDVERLKLHDYHAIIRNPMDLGTVKENLAFGR----YPSHEAFAADVRLTFSNALR 212
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKA 169
YN VH A +LL FE + + L +E +R E A +
Sbjct: 213 YNPADHHVHRYASNLLATFEGLYKEALSWFEQECQRLEPPMPLALPPPPQPPVPMPMQAP 272
Query: 170 KELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNP 229
+ + + R+MS EEK L + L E + L+IV + N
Sbjct: 273 PRIGGGGRRPKPKAREPNK------REMSDEEKHKLRVEIGNLPEEKMGNVLQIVQKRNT 326
Query: 230 SFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNN 276
+ V+LD D TLW L FV KA S+S + N +
Sbjct: 327 DPALMGEVVELDFDEMDVETLWELDRFVVNCKKALSKSRRTVAMNGD 373
>gi|213406251|ref|XP_002173897.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212001944|gb|EEB07604.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 726
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F QH+ +A+PF PVD G DY++VI+ PMD T++NK++ + Y N+++ AD
Sbjct: 406 FKKQHETYAYPFYQPVDPVAFGCPDYFKVIKHPMDLGTMQNKLNHNE---YANIKDFEAD 462
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
V LVFKN ++N V++M K L F KW +
Sbjct: 463 VNLVFKNCYRFNPPGTPVYLMGKKLETVFRSKWAE 497
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 7/106 (6%)
Query: 30 LLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 89
+Q +RQ R + + + PF PVD + DY +I+ PMD ST++ K+ ++
Sbjct: 244 YIQAMLRQLR----RCRDSIPFRVPVDPVKQNIPDYPLIIKHPMDLSTMQRKLTNRE--- 296
Query: 90 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
Y + + D+ L+F N YN V VM K+L F ++ QL
Sbjct: 297 YDSAQSFIDDMNLMFDNCFLYNGTESPVGVMGKNLQATFTKQLKQL 342
>gi|395854578|ref|XP_003799760.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific
protein-like [Otolemur garnettii]
Length = 773
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF + VDV LGLH+Y ++++ PMD TIK KMD ++ Y++ E ADVRL+ N
Sbjct: 221 YAWPFYNSVDVNALGLHNYXDIVKHPMDLGTIKWKMDNQE---YKDAYEFAADVRLMLMN 277
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN +V M K L + FE
Sbjct: 278 CYKYNPPDHEVVTMTKMLQDVFE 300
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 73 MDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
MD +TIK ++ K Y E D+ +F N YN DD+ +MA++L + F
Sbjct: 1 MDLNTIKKHLENK---YYVKASECIEDLNTMFSNCYLYNKPXDDIVLMAQTLKKLF---- 53
Query: 133 LQLLPKVMEEEK--RQEEEEAKAQLDMQLTQEAVQTNKAK 170
+Q L ++ +EEK +E K++L+ EAV + K K
Sbjct: 54 IQKLSQMPQEEKVVGGKERIKKSKLEGTQQHEAVSSVKEK 93
>gi|397567839|gb|EJK45812.1| hypothetical protein THAOC_35556, partial [Thalassiosira oceanica]
Length = 1238
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ W F PV+ LG+ DY+++I+KPMD TI K+D + Y + + ADV+L F
Sbjct: 750 HEHGWVFATPVNPVELGIDDYFDIIKKPMDLGTIGEKLDQEL---YHSFEDFRADVQLTF 806
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
+NAMKYN+E+ VH MAK+L +KF+ + ++L
Sbjct: 807 ENAMKYNEEQTVVHDMAKALKKKFDLDYNKML 838
>gi|66911387|gb|AAH97199.1| LOC100004566 protein [Danio rerio]
Length = 378
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H +AWPF PVD L L DYY +I++PMD TIK +++ Y
Sbjct: 256 LQFLQKALVKTLWRHHFAWPFHEPVDAAKLNLPDYYNIIKQPMDMGTIKKRLENN---YY 312
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE 142
R+ E D +F N YN DD+ +MA+SL + F +K Q +P+V EE
Sbjct: 313 RSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQ-MPEVEEE 363
>gi|147826573|emb|CAN72911.1| hypothetical protein VITISV_007433 [Vitis vinifera]
Length = 588
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H W F PVD L + DY+ +I KPMD TIK+K++ Y E ADVR
Sbjct: 81 LMTHPAGWVFNQPVDPVALNIPDYFSIISKPMDLGTIKSKLEKNX---YLATEEFAADVR 137
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
L F NAM YN ++VH MAK L + F +W
Sbjct: 138 LTFANAMLYNPPSNNVHQMAKKLNDLFNTRW 168
>gi|10441758|gb|AAG17179.1|AF191032_1 RING3, partial [Myxine glutinosa]
Length = 732
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF VD LGLHDY+++I+ PMD +TIK K + ++ Y N+ E D
Sbjct: 421 FTKKHAAYAWPFYKAVDAFALGLHDYHDIIKIPMDLTTIKEKFERRE---YTNLHEFADD 477
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 478 MRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKV 513
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H++AWPF HPVD L L DYY++I+ P+D TIK ++ + Y
Sbjct: 35 LQFLQKVVMKVLWKHQFAWPFHHPVDAAKLNLPDYYQIIKNPLDMLTIKKRL---ESNYY 91
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA+++ + F +K
Sbjct: 92 WTAVECIQDFSTMFTNCYIYNRPNDDIVLMAQTVEKAFLQK 132
>gi|317038280|ref|XP_001401977.2| transcription regulator BDF1 [Aspergillus niger CBS 513.88]
Length = 835
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+ +A PF HPVD L + Y+ +I+KPMDFST+++K+ Y N +E D+RL+
Sbjct: 495 HYTYAMPFYHPVDPVALNIPTYHSIIKKPMDFSTVQSKLRAGQ---YENAKEFELDMRLI 551
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
KN K+N D ++ + L E+F +KW Q
Sbjct: 552 LKNCFKFNIPGDPTYMAGQRLEEEFNKKWAQ 582
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 32 QFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYR 91
+F + +S H + + PVD L + Y + I++PMD TI+ K+ YR
Sbjct: 287 KFLSKSIQSLKRMHDSRF-YREPVDPIKLNVPHYPQFIKRPMDLGTIEKKL---KNNVYR 342
Query: 92 NVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME-EEKRQEEEE 150
+ + D L+ +NA+ +N V + L F +K + LP+ E EEK+ ++
Sbjct: 343 TAQAVIDDFNLMVQNALTFNGPDHLVAQEGQKLKITF-DKQMANLPRADEVEEKKPKKSV 401
Query: 151 AK 152
AK
Sbjct: 402 AK 403
>gi|358366386|dbj|GAA83007.1| transcription regulator Bdf1 [Aspergillus kawachii IFO 4308]
Length = 835
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+ +A PF HPVD L + Y+ +I+KPMDFST+++K+ Y N +E D+RL+
Sbjct: 495 HYTYAMPFYHPVDPVALNIPTYHSIIKKPMDFSTVQSKLRAGQ---YENAKEFELDMRLI 551
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
KN K+N D ++ + L E+F +KW Q
Sbjct: 552 LKNCFKFNIPGDPTYMAGQRLEEEFNKKWAQ 582
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Query: 32 QFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYR 91
+F + +S H + + PVD L + Y + I++PMD TI+ K+ + YR
Sbjct: 287 KFLSKSIQSLKRMHDSRF-YREPVDPIKLNVPHYPQFIKRPMDLGTIEKKLKNNN---YR 342
Query: 92 NVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME-EEKRQEEEE 150
+ + D L+ +NA+ +N V + L F +K + LP+ E EEK+ ++
Sbjct: 343 TAQAVIDDFNLMVQNALTFNGPDHLVAQEGQKLKITF-DKQMANLPRADEVEEKKPKKSV 401
Query: 151 AK 152
AK
Sbjct: 402 AK 403
>gi|195429272|ref|XP_002062687.1| GK19581 [Drosophila willistoni]
gi|194158772|gb|EDW73673.1| GK19581 [Drosophila willistoni]
Length = 293
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Query: 43 TQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRL 102
T K AW F PVD + LGL DY E++++PMDF TIK ++D D Y++ E DVRL
Sbjct: 30 TYKKLAWIFYEPVDPQTLGLDDYLEIVKEPMDFGTIKQRLDADD---YKDAMEFAKDVRL 86
Query: 103 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLD 156
+F NA Y + + MAK L FE+ + +LL E + ++E K + D
Sbjct: 87 IFFNAYLYTNSDHVCYKMAKELQLIFEKMFTELLNNSAELMEIADKEAVKVESD 140
>gi|255947958|ref|XP_002564746.1| Pc22g07210 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591763|emb|CAP98009.1| Pc22g07210 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 812
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 46/259 (17%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+ W PF +PVD L + Y+ VI+KPMD ST+++K+ K G Y N +E +DVRL+
Sbjct: 479 HYNWVMPFYYPVDPVALNIPSYHSVIKKPMDLSTVQSKL--KTGQ-YENAKEFESDVRLI 535
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ----------------------------- 134
FKN ++N D +V + E F KW Q
Sbjct: 536 FKNCYRFNIPGDPTYVCGERAEEIFNGKWAQKSDYLEAHEPHPEQNTDSSDEDSDEDAEE 595
Query: 135 ---------LLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLEN 185
LL K + E RQ EA + + + K K + + ++ +
Sbjct: 596 SEEDDEKLTLLQKQIAEMSRQ--VEAITNKKKKTPPSSKKVGKTKLAKKDSKKLSSGKRD 653
Query: 186 LRETVIQ--KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ-EVDLDM 242
+ V Q K R ++ EK+ + ++ L + + +AL+I+ N P T + E++LD+
Sbjct: 654 KKSKVSQPGKTRAVTYNEKQIISNGISSLPDKRMQQALQIIQNNVPQLKGTDEAEIELDI 713
Query: 243 DAQSELTLWRLKVFVQESL 261
D L +L FV++ +
Sbjct: 714 DELPNDVLLKLLNFVKKHV 732
>gi|134074582|emb|CAK38875.1| unnamed protein product [Aspergillus niger]
Length = 793
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+ +A PF HPVD L + Y+ +I+KPMDFST+++K+ Y N +E D+RL+
Sbjct: 453 HYTYAMPFYHPVDPVALNIPTYHSIIKKPMDFSTVQSKLRAGQ---YENAKEFELDMRLI 509
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
KN K+N D ++ + L E+F +KW Q
Sbjct: 510 LKNCFKFNIPGDPTYMAGQRLEEEFNKKWAQ 540
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 32 QFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYR 91
+F + +S H + + PVD L + Y + I++PMD TI+ K+ YR
Sbjct: 287 KFLSKSIQSLKRMHDSRF-YREPVDPIKLNVPHYPQFIKRPMDLGTIEKKL---KNNVYR 342
Query: 92 NVREIYADVRLVFKNAMKYN 111
+ + D L+ +NA+ +N
Sbjct: 343 TAQAVIDDFNLMVQNALTFN 362
>gi|297740594|emb|CBI30776.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H W F PVD L + DY+ +I KPMD TIK+K+ + Y E ADVR
Sbjct: 66 LMTHPAGWVFNQPVDPVALNIPDYFSIISKPMDLGTIKSKL---EKNMYLATEEFAADVR 122
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
L F NAM YN ++VH MAK L + F +W
Sbjct: 123 LTFANAMLYNPPSNNVHQMAKKLNDLFNTRW 153
>gi|115475161|ref|NP_001061177.1| Os08g0192800 [Oryza sativa Japonica Group]
gi|40253661|dbj|BAD05604.1| putative RNA-binding protein Virp1a [Oryza sativa Japonica Group]
gi|113623146|dbj|BAF23091.1| Os08g0192800 [Oryza sativa Japonica Group]
gi|215678743|dbj|BAG95180.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765310|dbj|BAG87007.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767863|dbj|BAH00092.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640052|gb|EEE68184.1| hypothetical protein OsJ_26323 [Oryza sativa Japonica Group]
Length = 481
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 95/227 (41%), Gaps = 11/227 (4%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA-DVRLVFKNAMK 109
F PVDVE L LHDY+ +I PMD T+K + G E +A DVRL F NA++
Sbjct: 157 FNSPVDVERLKLHDYHAIIRNPMDLGTVKENL----AFGRYPSHEAFATDVRLTFSNALR 212
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKA 169
YN VH A +LL FE + + L +E +R E A +
Sbjct: 213 YNPADHHVHRYASNLLATFEGLYKEALSWFEQECQRLEPPMPLALPPPPQPPVPMPMQAP 272
Query: 170 KELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNP 229
+ + + R+MS EEK L + L E + L+IV + N
Sbjct: 273 PRIGGGGRRPKPKAREPNK------REMSDEEKHKLRVEIGNLPEEKMGNVLQIVQKRNT 326
Query: 230 SFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNN 276
+ V+LD D TLW L FV KA S+S + N +
Sbjct: 327 DPALMGEVVELDFDEMDVETLWELDRFVVNCKKALSKSRRTVAMNGD 373
>gi|359483574|ref|XP_002269681.2| PREDICTED: transcription factor GTE9-like [Vitis vinifera]
Length = 588
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H W F PVD L + DY+ +I KPMD TIK+K+ + Y E ADVRL F
Sbjct: 84 HPAGWVFNQPVDPVALNIPDYFSIISKPMDLGTIKSKL---EKNMYLATEEFAADVRLTF 140
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
NAM YN ++VH MAK L + F +W
Sbjct: 141 ANAMLYNPPSNNVHQMAKKLNDLFNTRW 168
>gi|413917011|gb|AFW56943.1| hypothetical protein ZEAMMB73_709520 [Zea mays]
Length = 493
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 122/268 (45%), Gaps = 16/268 (5%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA-DVRLVF 104
K W F PVDVEGL LHDY +I PMD T+K + G E +A DVRL F
Sbjct: 156 KSVW-FNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLTA----GRYPSHEAFAGDVRLTF 210
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAV 164
NA++YN VH A LL FE + + V E+++++ E QLD+
Sbjct: 211 NNALRYNPPDHHVHRYAGDLLATFEGMYKE---AVSWFEQQRQQLEPPMQLDLLPPPPPP 267
Query: 165 QTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIV 224
Q + +++ L + + K R+M EEK+ L + L + + L+IV
Sbjct: 268 QLPVSVPVQAPLRMWGGRRPKPKARQPNK-REMDEEEKQKLRVEIENLPEDKVLNVLQIV 326
Query: 225 AENNPSFHATAQEVDLDMDAQSELTLWRLKVFV---QESLKAASRSS---GDMGGNNNNN 278
+ N + + V+LD D TLW L FV +++LK + R+S GD N +
Sbjct: 327 QKRNRDPALSGEVVELDFDELDIETLWELDRFVVNWRKALKKSQRNSRMNGDAAVMNADA 386
Query: 279 NDDNNNEKDNSNKKNKNNPKRKKEICDA 306
D D+ + NP EI ++
Sbjct: 387 IDATIVPDDDDRVEVAVNPSVVVEIGES 414
>gi|83768107|dbj|BAE58246.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871763|gb|EIT80920.1| transcription initiation factor TFIID, subunit BDF1 [Aspergillus
oryzae 3.042]
Length = 762
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 56/262 (21%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFK 105
+A PF PVD L + Y+ +I+KPMD ST++ K+ TG Y N +E D+RL+FK
Sbjct: 423 YAVPFYQPVDPVALNIPTYHSIIKKPMDLSTMQTKLK----TGQYENAKEFELDMRLIFK 478
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK------------- 152
N K+N D ++ + E F KW Q + E E K
Sbjct: 479 NCFKFNIPGDPTYLAGQKFEEIFNSKWSQKARYLEAHEPHPEHHSGKSESESDESDEDAD 538
Query: 153 ---------------AQLDMQLTQEAVQ----------TNKAKELRSELNEV----DMQL 183
A++ Q+ EA+ + KA +L+S E+ M L
Sbjct: 539 DSDDDEELQRLQQKIAEMTRQV--EAIAQKKKKKTPPGSKKAGKLKSSTKEIKKPGSMNL 596
Query: 184 E------NLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ- 236
+++ + +K R ++ +EK+ + ++ L + + +AL+I+ N PS T +
Sbjct: 597 PKKDKKSSIKPSKPEKQRWVTYQEKQIISNGISSLPDKKMQEALKIIQSNVPSLKGTQET 656
Query: 237 EVDLDMDAQSELTLWRLKVFVQ 258
E++LD+D L L FV+
Sbjct: 657 EIELDIDELPNDVLLMLLRFVK 678
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 32 QFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYR 91
+F ++ +S H + + PVD E + + Y ++I +PMD TI+ ++ + Y+
Sbjct: 213 KFLLKGIQSLKRMHDSRF-YREPVDPEKMNIPHYPQIIRQPMDLGTIERRLKNNE---YK 268
Query: 92 NVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL-PKVMEEEK 144
+V+ + D L+ +N++ +N V + L FE++ + P +EE K
Sbjct: 269 SVKAVVDDFNLMVQNSLTFNGPDHIVAQEGQKLKSTFEKQMINCPRPDDIEERK 322
>gi|348690450|gb|EGZ30264.1| hypothetical protein PHYSODRAFT_310264 [Phytophthora sojae]
Length = 1333
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 5/87 (5%)
Query: 50 PFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD-VRLVFKNAM 108
PF+ PVD LG+ DY+ VI++PMD TI++ ++ TG+ + +A+ VRLVF+NAM
Sbjct: 351 PFLVPVDPVALGIPDYFHVIKEPMDLGTIRSNLE----TGFYDTPSAFAEHVRLVFRNAM 406
Query: 109 KYNDERDDVHVMAKSLLEKFEEKWLQL 135
YN VH+ A+ L++ FE ++ L
Sbjct: 407 LYNAAHSQVHIYARKLMDDFERRFKSL 433
>gi|308489328|ref|XP_003106857.1| hypothetical protein CRE_17238 [Caenorhabditis remanei]
gi|308252745|gb|EFO96697.1| hypothetical protein CRE_17238 [Caenorhabditis remanei]
Length = 392
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
T + + +PF PVD LGL DY+EVI+KPMD ST+K K+ G++ Y N + D +
Sbjct: 132 TTHNAYTFPFRKPVDTVLLGLVDYHEVIKKPMDMSTMKKKLIGEE---YENAEDFKKDFK 188
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
L+ +N + YN+E D V +A E F KW + P
Sbjct: 189 LMIQNCLTYNNEGDPVSDLAIQFREAFAAKWKKEFP 224
>gi|167515986|ref|XP_001742334.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778958|gb|EDQ92572.1| predicted protein [Monosiga brevicollis MX1]
Length = 497
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 68/129 (52%), Gaps = 6/129 (4%)
Query: 6 RSSSKMHFIGKKLLEGGCKNLSASLLQFFVRQARSFITQHK-WAWPFMHPVDVEGLGLHD 64
R SS++ K L L A + + F +H+ +AWPF PVD+ L + D
Sbjct: 223 RQSSRVIRAPKDGLLAASSRLPAHMRVCYDIIKDLFGKKHQAYAWPFYEPVDIVKLNIPD 282
Query: 65 YYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA-DVRLVFKNAMKYNDERDDVHVMAKS 123
YY+VI++PMD T++ K++ G R+ +A DVRLVF N YN DV MAKS
Sbjct: 283 YYDVIKQPMDLGTVRTKLE----EGEYETRDDFAHDVRLVFANCYTYNPPGSDVVKMAKS 338
Query: 124 LLEKFEEKW 132
E FE +W
Sbjct: 339 TSEVFELQW 347
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 7/124 (5%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H AWPF PVD + LGL Y E+I PMD TI+NK+ K+ Y
Sbjct: 86 LQYISKVILPTLNKHPSAWPFKKPVDWKKLGLLSYPEIIANPMDLGTIRNKLRKKE---Y 142
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 150
+ RE D+ LV+ N +N DDV++M+++L E + Q+L + E E +
Sbjct: 143 FSGRECLDDIELVWHNCQTFNRPSDDVYIMSQAL----ESDYKQMLANLPEPEVPLDRPS 198
Query: 151 AKAQ 154
AKA+
Sbjct: 199 AKAK 202
>gi|440293863|gb|ELP86910.1| bromodomain containing protein, putative [Entamoeba invadens IP1]
Length = 358
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
A PF+ PVD L DYY VI +PMD TI K+ + G Y ++ + ADVRL FKNA
Sbjct: 164 ANPFLSPVDPIAQNLPDYYIVITEPMDLGTITKKL--RMGV-YDHIDDFAADVRLTFKNA 220
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQL 135
MKYN R+ VHV AK+LL+ F++K +L
Sbjct: 221 MKYNPPRNMVHVFAKTLLKYFDDKIKEL 248
>gi|224061031|ref|XP_002300324.1| global transcription factor group [Populus trichocarpa]
gi|222847582|gb|EEE85129.1| global transcription factor group [Populus trichocarpa]
Length = 564
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H W F PVD L + DY+ VI PMD T+K+K+ GK+ Y ++ E AD+RL F
Sbjct: 95 HPAGWVFNKPVDPVALKIPDYFTVISNPMDLGTVKSKL-GKNF--YASINEFAADIRLTF 151
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
NAM YN ++VH MA+ L FE W L
Sbjct: 152 SNAMLYNPPSNNVHRMAEELNGIFETGWKAL 182
>gi|425766265|gb|EKV04889.1| hypothetical protein PDIG_86900 [Penicillium digitatum PHI26]
gi|425778995|gb|EKV17090.1| hypothetical protein PDIP_32890 [Penicillium digitatum Pd1]
Length = 807
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 111/260 (42%), Gaps = 48/260 (18%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRL 102
+ W PF +PVD L + Y+ VI+KPMD ST ++K+ TG Y N +E DVRL
Sbjct: 474 HYSWVMPFYYPVDPVALNIPTYHSVIKKPMDLSTAQSKLK----TGQYENAKEFENDVRL 529
Query: 103 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ---------------------------- 134
+FKN ++N D + + E F KW Q
Sbjct: 530 IFKNCYRFNIPGDPTFICGQRAEEIFNAKWAQKSDYLEAHEPHPEQNTDSSDEDSDEDAE 589
Query: 135 ----------LLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLE 184
LL K + E RQ EA + + + K K ++ + ++
Sbjct: 590 ESEEDDEKLTLLQKQIAEMSRQ--VEAITNKKKKTPPSSKKVGKTKLVKKDSKKISSGKR 647
Query: 185 NLRETVIQ--KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ-EVDLD 241
+ R + Q K R ++ EK+ + ++ L + + +AL+I+ N P T + E++LD
Sbjct: 648 DKRSKISQPGKTRAITYNEKQIISNGISSLPDKRMQQALQIIQNNVPQLKGTDEAEIELD 707
Query: 242 MDAQSELTLWRLKVFVQESL 261
+D L +L FV++ +
Sbjct: 708 IDELPNDVLLKLLNFVKKHV 727
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 5/125 (4%)
Query: 22 GCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 81
G L+ +F ++ S H + + PVD + + Y+ +I PMD T++ K
Sbjct: 260 GGPGLTKMQHKFILKSLTSLKRMHDARF-YKEPVDAVKMNIPQYHSIITHPMDLGTMERK 318
Query: 82 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
+ Y + + + D L+ N +N V L F EK + LPK E
Sbjct: 319 LKNNQ---YSSPKAVADDFALMVNNTTIFNGADHLVTQEGIKLKATF-EKQMANLPKPEE 374
Query: 142 EEKRQ 146
E+R+
Sbjct: 375 VEERK 379
>gi|238485866|ref|XP_002374171.1| transcription regulator BDF1, putative [Aspergillus flavus
NRRL3357]
gi|317144623|ref|XP_001820248.2| transcription regulator BDF1 [Aspergillus oryzae RIB40]
gi|220699050|gb|EED55389.1| transcription regulator BDF1, putative [Aspergillus flavus
NRRL3357]
Length = 812
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 56/262 (21%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFK 105
+A PF PVD L + Y+ +I+KPMD ST++ K+ TG Y N +E D+RL+FK
Sbjct: 473 YAVPFYQPVDPVALNIPTYHSIIKKPMDLSTMQTKLK----TGQYENAKEFELDMRLIFK 528
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK------------- 152
N K+N D ++ + E F KW Q + E E K
Sbjct: 529 NCFKFNIPGDPTYLAGQKFEEIFNSKWSQKARYLEAHEPHPEHHSGKSESESDESDEDAD 588
Query: 153 ---------------AQLDMQLTQEAVQ----------TNKAKELRSELNEV----DMQL 183
A++ Q+ EA+ + KA +L+S E+ M L
Sbjct: 589 DSDDDEELQRLQQKIAEMTRQV--EAIAQKKKKKTPPGSKKAGKLKSSTKEIKKPGSMNL 646
Query: 184 E------NLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ- 236
+++ + +K R ++ +EK+ + ++ L + + +AL+I+ N PS T +
Sbjct: 647 PKKDKKSSIKPSKPEKQRWVTYQEKQIISNGISSLPDKKMQEALKIIQSNVPSLKGTQET 706
Query: 237 EVDLDMDAQSELTLWRLKVFVQ 258
E++LD+D L L FV+
Sbjct: 707 EIELDIDELPNDVLLMLLRFVK 728
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 32 QFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYR 91
+F ++ +S H + + PVD E + + Y ++I +PMD TI+ ++ + Y+
Sbjct: 263 KFLLKGIQSLKRMHDSRF-YREPVDPEKMNIPHYPQIIRQPMDLGTIERRLKNNE---YK 318
Query: 92 NVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL-PKVMEEEK 144
+V+ + D L+ +N++ +N V + L FE++ + P +EE K
Sbjct: 319 SVKAVVDDFNLMVQNSLTFNGPDHIVAQEGQKLKSTFEKQMINCPRPDDIEERK 372
>gi|320170046|gb|EFW46945.1| E1A binding protein p300 [Capsaspora owczarzaki ATCC 30864]
Length = 2072
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD-GKDGTGYRNVREIYADVRLVFKN 106
A PFM PVD LG+ DY VI++PMDFSTI+ ++D D YR+ D+RLVF N
Sbjct: 905 AGPFMVPVDPVALGILDYLTVIKRPMDFSTIRTRLDRPTDKHFYRDPLGFVDDMRLVFTN 964
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEK 131
A+ YN + VH MA L + FE +
Sbjct: 965 ALTYNKKNSRVHKMATKLSDLFENR 989
>gi|326502374|dbj|BAJ95250.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 315
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 17/165 (10%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ K++ F PVDVE L + DY E+I+ PMD TIK K+ D Y + + ADVR
Sbjct: 168 LMTQKFSHIFNVPVDVEKLNIPDYNEIIKHPMDLGTIKKKL---DSGSYTSPSDFAADVR 224
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L F NA+ YN VH MA L + FE +W K E++ A A + +
Sbjct: 225 LTFNNAITYNPRGHAVHDMAIQLNKMFESRW-----------KTVEKKLASAAIKPHVEV 273
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLG 206
+ + + K ++ D+ ++ +R T I K KM+ EEK++ G
Sbjct: 274 DRADSKRRKT--PPVDHSDLSIDCVRPTEIVKP-KMTFEEKESFG 315
>gi|326494522|dbj|BAJ94380.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 274
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 59/123 (47%), Gaps = 9/123 (7%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H W F PVD + G+ DY++VI PMD T+K K+ K Y + + ADVRL F
Sbjct: 94 HPGGWLFHKPVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKS---YLSTDDFAADVRLTF 150
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAV 164
NAM YN + VH +A+ L F +W E K + QL M++ + V
Sbjct: 151 SNAMTYNPPGNQVHTVAEQLNIMFNSEWTSY------ERKWIDRNLKPVQLPMKVIKAHV 204
Query: 165 QTN 167
N
Sbjct: 205 AVN 207
>gi|324504882|gb|ADY42105.1| Homeotic protein female sterile [Ascaris suum]
Length = 696
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + +T+H+ AWPF+ PVD L + DY+ V+++PMD +TI ++ + Y
Sbjct: 93 LQFMQKNVLDPLTRHQHAWPFISPVDAVKLNIPDYHNVVKRPMDLNTIGKRL---QNSYY 149
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
+ E D +F N +YN + DDV +M K++ ++ EK L+LLP
Sbjct: 150 FSAEECMHDFETIFANCYEYNRKEDDVWLMCKNIENEYREK-LKLLP 195
>gi|240256475|ref|NP_201137.5| nuclear protein X1 [Arabidopsis thaliana]
gi|327488242|sp|Q9FGW9.2|GTE10_ARATH RecName: Full=Transcription factor GTE10; AltName:
Full=Bromodomain-containing protein GTE10; AltName:
Full=Nuclear protein X1; AltName: Full=Protein GLOBAL
TRANSCRIPTION FACTOR GROUP E10
gi|332010349|gb|AED97732.1| nuclear protein X1 [Arabidopsis thaliana]
Length = 1061
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 14/224 (6%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
HK WPF PVD L + DY+ VI+ PMD TI++++ + Y + + ADVRL F
Sbjct: 175 HKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGE---YSSPLDFAADVRLTF 231
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAV 164
N++ YN + H MA+ + + FE W + K+ + + A L+ ++ E
Sbjct: 232 SNSIAYNPPGNQFHTMAQGISKYFESGWKSIEKKIPMSKPPVIPLTSSASLESEIPFEVA 291
Query: 165 QTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIV 224
K + + +N+ +++E + M+ EKK LG L L + K +++
Sbjct: 292 PMRKKE---AAMNDNKLRVEPAKLV-------MTDGEKKKLGQDLMALEEDFPQKIADLL 341
Query: 225 AENNPSFHATAQ-EVDLDMDAQSELTLWRLKVFVQESLKAASRS 267
E + S + + E+++D++A S+ L+ ++ + + L+ +S
Sbjct: 342 REQSGSDGQSGEGEIEIDIEALSDEILFMVRKLLDDYLREKKKS 385
>gi|357476123|ref|XP_003608347.1| Bromodomain-containing protein [Medicago truncatula]
gi|355509402|gb|AES90544.1| Bromodomain-containing protein [Medicago truncatula]
Length = 390
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K W F PVD L LHDY+++I+ PMD T+K+K+ Y E DV+L FK
Sbjct: 163 KIGWIFSSPVDPVALNLHDYFDIIKHPMDLGTVKSKL---AKNAYSTPAEFADDVKLTFK 219
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEE 130
NA+ YN + DV+ A LLEKFEE
Sbjct: 220 NALTYNPKGHDVNTAAMQLLEKFEE 244
>gi|330812863|ref|XP_003291336.1| hypothetical protein DICPUDRAFT_98971 [Dictyostelium purpureum]
gi|325078478|gb|EGC32127.1| hypothetical protein DICPUDRAFT_98971 [Dictyostelium purpureum]
Length = 564
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 114/229 (49%), Gaps = 13/229 (5%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
I + K ++ F PVD E + DY+++I+ PMD STI +K+D + Y +++ ADVR
Sbjct: 337 IFKKKISYAFQRPVDPELENIPDYFDIIKNPMDISTIDSKLDNE---KYGTIKDFAADVR 393
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP-KVMEEEKRQEEEEAKAQLDMQLT 160
L+F+NA+ YN E V+ AK LL F+ +++ P + + K A A +
Sbjct: 394 LMFENALTYNAEISPVYKYAKQLLTYFDNSFIKNYPNEKIPTYKSLNPAPAAAPAQPNSS 453
Query: 161 QEAVQTNKAKELRSEL-------NEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLS 213
+ T ++L S++ N ++ +K S +E+KNL + LS
Sbjct: 454 SGSANTPNKRKLDSDIKVKEETSTATTSSSTNDSKSSSPPAKKYSDDERKNLMEKINELS 513
Query: 214 PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 262
ED+ L I+ ++ + + + + +++DM + L +++ F+ E K
Sbjct: 514 AEDVQTVLSIIDQS--AINQSDESLEIDMYKIDDKNLRQVEQFLNECFK 560
>gi|295669172|ref|XP_002795134.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285068|gb|EEH40634.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 910
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKN 106
A PF HPVD L + Y+ VI+KPMD T++ K+ TG Y N +E+ AD+RL+FKN
Sbjct: 563 AAPFYHPVDPVALNIPTYHSVIKKPMDLQTVQTKLR----TGQYENAKEMEADIRLIFKN 618
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
K+N D KS+ E F+ KW Q
Sbjct: 619 CYKFNIPGDPTFNAGKSMEELFDNKWSQ 646
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
F PVD L + +Y +I+ PMD T+++K+ K G+ Y +V + AD L+ +N++ +
Sbjct: 363 FREPVDAVKLNIPNYPLIIKNPMDLRTMEDKL--KQGS-YASVDAVIADFNLMIENSVTF 419
Query: 111 NDERDDVHVMAKSLLEKFEEKWLQLLPKV 139
N V + ++L + F E+ L LPK
Sbjct: 420 NGADHVVSMEGRNLKQNF-ERHLSKLPKA 447
>gi|194763657|ref|XP_001963949.1| GF20989 [Drosophila ananassae]
gi|190618874|gb|EDV34398.1| GF20989 [Drosophila ananassae]
Length = 907
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ I +H ++WPF PVD + L L DY+++I+ PMD TIK +++ Y
Sbjct: 39 LQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKHPMDMGTIKKRLENNY---Y 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 150
+ +E D +F N YN +DV VMA++L + F +K ++L+PK EE E
Sbjct: 96 WSAKEAIHDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IELMPK---EELELEPVT 151
Query: 151 AKA 153
AK
Sbjct: 152 AKG 154
>gi|225682582|gb|EEH20866.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 908
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKN 106
A PF HPVD L + Y+ VI+KPMD T++ K+ TG Y N +E+ AD+RL+FKN
Sbjct: 561 AAPFYHPVDPVALNIPTYHSVIKKPMDLQTVQTKLR----TGQYENAKEMEADIRLIFKN 616
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
K+N D KS+ E F+ KW Q
Sbjct: 617 CYKFNIPGDPTFNAGKSMEELFDNKWSQ 644
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
F PVD L + +Y +I+ PMD T+++K+ K G+ Y +V + AD L+ +N++ +
Sbjct: 361 FREPVDAVKLNIPNYPLIIKNPMDLRTMEDKL--KQGS-YASVDAVIADFNLMIENSVTF 417
Query: 111 NDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 152
N V + ++L + F E+ L LPK E E E++AK
Sbjct: 418 NGADHVVSMEGRNLKQNF-ERHLSKLPKADEVEVTPAEKKAK 458
>gi|350632424|gb|EHA20792.1| hypothetical protein ASPNIDRAFT_139507 [Aspergillus niger ATCC
1015]
Length = 531
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+ +A PF HPVD L + Y+ +I+KPMDFST+++K+ Y N +E D+RL+
Sbjct: 279 HYTYAMPFYHPVDPVALNIPTYHSIIKKPMDFSTVQSKLRAGQ---YENAKEFELDMRLI 335
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
KN K+N D ++ + L E+F +KW Q
Sbjct: 336 LKNCFKFNIPGDPTYMAGQRLEEEFNKKWAQ 366
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 6/129 (4%)
Query: 32 QFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYR 91
+F + +S H + + PVD L + Y + I++PMD TI+ K+ YR
Sbjct: 101 KFLSKSIQSLKRMHDSRF-YREPVDPIKLNVPHYPQFIKRPMDLGTIEKKL---KNNVYR 156
Query: 92 NVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME-EEKRQEEEE 150
+ + D L+ +NA+ +N V + L F +K + LP+ E EEK+ ++
Sbjct: 157 TAQAVIDDFNLMVQNALTFNGPDHLVAQEGQKLKITF-DKQMANLPRADEVEEKKPKKSV 215
Query: 151 AKAQLDMQL 159
AK ++L
Sbjct: 216 AKPSTAIRL 224
>gi|406602290|emb|CCH46128.1| Bromodomain-containing factor 1 [Wickerhamomyces ciferrii]
Length = 683
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 117/252 (46%), Gaps = 33/252 (13%)
Query: 34 FVRQARSFITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
F +Q +T K+ +PF+ PVD L Y++ + +PMD ST++NK++ Y
Sbjct: 363 FSQQVLKELTSKKYESFNYPFLEPVDPVALNCPTYFDYVSEPMDLSTVQNKLNN---NIY 419
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 150
N E D+RL+F+N +N E V++M L F+++W+ V +Q ++E
Sbjct: 420 ENADEFERDIRLIFQNCYSFNPEGTAVNMMGHRLEAVFDKRWVDR--PVTPATPQQSDDE 477
Query: 151 AKAQLDMQLTQEAVQTNKAKE-LRSELNEVDMQLENLRETVIQKCRK------------- 196
+ + + + E+ TN A + L +L + +QL L++ ++K R+
Sbjct: 478 EEEESEEEEIDESAITNPAIQFLEQQLETMKLQLAKLKKEELEKIRRERSKKKKSSKPKK 537
Query: 197 -----------MSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQ 245
++ E KK L + LS L + L I+ E + +E++LDMD
Sbjct: 538 RRRRTSDASFTVTYEMKKELSEKMGELSERKLNQVLSIIGEALNINSSNGEEIELDMDQL 597
Query: 246 SELTLWRLKVFV 257
TL +L FV
Sbjct: 598 DNATLVKLYTFV 609
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 7/139 (5%)
Query: 4 ALRSSSKMHFIGKKLLEGGCKNLSASLLQ----FFVRQARSFITQHKWAWPFMHPVDVEG 59
A+ +S M K E NL L F + I + K A PF+HPVD
Sbjct: 156 AIVDTSNMTPAPKPPAEPDMNNLPEKPLPKHQAGFANKTLKIIKRMKDAGPFLHPVDTVK 215
Query: 60 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 119
L + YY I +PMD STI+ K+ + Y ++E D L+ N +++N +
Sbjct: 216 LQIPLYYNFITRPMDLSTIERKL---NANAYAELQEFIDDFNLMVDNCVRFNGAESGIAQ 272
Query: 120 MAKSLLEKFEEKWLQLLPK 138
M++++ FE+ L PK
Sbjct: 273 MSRNIQASFEKHMLNAPPK 291
>gi|325089952|gb|EGC43262.1| transcription regulator BDF1 [Ajellomyces capsulatus H88]
Length = 845
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKN 106
A PF +PVD L + Y+ +I+KPMD T++ K+ TG Y N +E+ ADVRL+FKN
Sbjct: 501 AIPFYYPVDPVALNIPTYHSIIKKPMDLQTVQTKLQ----TGQYENAKEMEADVRLIFKN 556
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
K+N D + KSL E F+ KW Q
Sbjct: 557 CYKFNIPGDPTYNSGKSLEEVFDNKWSQ 584
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 5/127 (3%)
Query: 26 LSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 85
L+A +F VR + H + F PVD L + +Y +I++PMD TI+ K+ K
Sbjct: 278 LTAKQSKFLVRCIQGLKRVHDSRF-FREPVDPVKLNIPNYPLIIKQPMDLRTIEEKL--K 334
Query: 86 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 145
G+ Y ++ + +D L+ N++ +N V + +L + F E+ L LP E E
Sbjct: 335 AGS-YTSLFAVTSDFDLMVDNSVTFNGPEHVVSMEGANLKQSF-ERHLAKLPGPDEVETS 392
Query: 146 QEEEEAK 152
+++A+
Sbjct: 393 PAQKKAQ 399
>gi|413917010|gb|AFW56942.1| hypothetical protein ZEAMMB73_709520 [Zea mays]
Length = 487
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 122/268 (45%), Gaps = 16/268 (5%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA-DVRLVF 104
K W F PVDVEGL LHDY +I PMD T+K + G E +A DVRL F
Sbjct: 156 KSVW-FNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLTA----GRYPSHEAFAGDVRLTF 210
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAV 164
NA++YN VH A LL FE + + V E+++++ E QLD+
Sbjct: 211 NNALRYNPPDHHVHRYAGDLLATFEGMYKE---AVSWFEQQRQQLEPPMQLDLLPPPPPP 267
Query: 165 QTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIV 224
Q + +++ L + + K R+M EEK+ L + L + + L+IV
Sbjct: 268 QLPVSVPVQAPLRMWGGRRPKPKARQPNK-REMDEEEKQKLRVEIENLPEDKVLNVLQIV 326
Query: 225 AENNPSFHATAQEVDLDMDAQSELTLWRLKVFV---QESLKAASRSS---GDMGGNNNNN 278
+ N + + V+LD D TLW L FV +++LK + R+S GD N +
Sbjct: 327 QKRNRDPALSGEVVELDFDELDIETLWELDRFVVNWRKALKKSQRNSRMNGDAAVMNADA 386
Query: 279 NDDNNNEKDNSNKKNKNNPKRKKEICDA 306
D D+ + NP EI ++
Sbjct: 387 IDATIVPDDDDRVEVAVNPSVVVEIGES 414
>gi|323447957|gb|EGB03862.1| hypothetical protein AURANDRAFT_55416 [Aureococcus anophagefferens]
Length = 628
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ Q ++PFM PVD E LGL DY++V++ PMD T++ ++ G Y N +++ DVR
Sbjct: 324 VVQQPSSYPFMAPVDAEALGLADYHDVVKAPMDLGTVERRL---GGGSYANPQKLVDDVR 380
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
L F NA KYN VH A L FE+K LL
Sbjct: 381 LTFANAQKYNPPAHPVHEAATHLGCVFEKKLQNLL 415
>gi|384499194|gb|EIE89685.1| hypothetical protein RO3G_14396 [Rhizopus delemar RA 99-880]
Length = 446
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 34 FVRQARSFITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
F QA + + K+ +PF+HPVDV L + DY ++I+ PMD STI+ K++ DG Y
Sbjct: 177 FCAQALKELKKSKYRDINYPFLHPVDVVALNIPDYVDIIKHPMDLSTIEKKLN--DGE-Y 233
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKRQEE 148
++ D++L+F N YN +H M + L + F+EKW Q PK + E
Sbjct: 234 VEPKDFEEDIKLMFNNCYLYNPPSLPIHKMGRQLEKVFDEKWAQKPPKTEPVPLVDDAPE 293
Query: 149 EEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENL----RETVIQKCRKMSTEEKKN 204
EE L+ + + + K EL + + Q+ ++ R+ +K R+ ST+ K
Sbjct: 294 EEFDEVLEQRNDSDDERDQKIAELERHIATISQQIASIKSQKRKKPTEKSRRASTKSTKE 353
Query: 205 LGTA 208
T+
Sbjct: 354 KKTS 357
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +H+ A PF+ PVD L + DY ++I PMD +T+ K+ + Y +V + DVR
Sbjct: 16 LKKHRDATPFLQPVDYIQLNIPDYPKIIHHPMDLATVDKKL---NSGQYSSVDQWICDVR 72
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 145
LVF N K+N + ++ +++ FE+ Q+ P E R
Sbjct: 73 LVFNNCFKFNGPEATISMLCQNVESAFEKSLRQMPPSKTSEPSR 116
>gi|299116970|emb|CBN75074.1| hypothetical protein Esi_0066_0081 [Ectocarpus siliculosus]
Length = 1147
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 7/102 (6%)
Query: 39 RSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 98
R+ + +W F PVD GL L +Y +I++PMD T+K+K++ + Y+N E
Sbjct: 709 RAIRGKSEW---FNEPVDYVGLNLPEYTTIIKRPMDLGTVKSKLESGE---YKNTVEFAH 762
Query: 99 DVRLVFKNAMKYN-DERDDVHVMAKSLLEKFEEKWLQLLPKV 139
+VRLVF NA YN DE DVH+ A+ LL F+ K +L P +
Sbjct: 763 EVRLVFSNACHYNSDETSDVHIAARHLLHVFDAKMEELGPGL 804
>gi|327350418|gb|EGE79275.1| transcription regulator BDF1 [Ajellomyces dermatitidis ATCC 18188]
Length = 943
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKN 106
A PF +PVD L + Y+ +I+KPMD T++ ++ TG Y N +E+ AD+RL+FKN
Sbjct: 599 ALPFYYPVDPVALNIPTYHSIIKKPMDLQTVQTRLQ----TGQYENAKEMEADIRLIFKN 654
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
K+N D + KSL E F+ KW Q
Sbjct: 655 CYKFNIPGDPTYNAGKSLEEVFDNKWSQ 682
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 26 LSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 85
L+ L+F VR + H + F PVD L + +Y +I++PMD TI+ K+ K
Sbjct: 376 LTTKQLKFLVRCIQGLKRVHDSRF-FREPVDPVKLNIPNYPLIIKQPMDLRTIEEKL--K 432
Query: 86 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 145
G+ Y ++ + +D L+ N++ +N V V L + F E+ L LP E E
Sbjct: 433 SGS-YASLAAVISDFDLMIDNSVTFNGPEHMVSVEGLRLKQNF-ERHLAKLPGPDEVETS 490
Query: 146 QEEEEAK 152
+++AK
Sbjct: 491 PAQKKAK 497
>gi|63054449|ref|NP_588301.2| Swr1 complex bromodomain subunit Brf1 [Schizosaccharomyces pombe
972h-]
gi|46397302|sp|Q9Y7N0.1|BDF1_SCHPO RecName: Full=SWR1 complex bromodomain subunit bdf1
gi|157310522|emb|CAB41059.2| Swr1 complex bromodomain subunit Brf1 [Schizosaccharomyces pombe]
Length = 578
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 114/255 (44%), Gaps = 40/255 (15%)
Query: 27 SASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 86
S L + + RQ SF A+PF PVD DY++VI++PMD STI++K++ +
Sbjct: 261 STVLKELYKRQYESF------AFPFYQPVDPVACDCPDYFDVIKEPMDLSTIQSKLNKNE 314
Query: 87 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE-KR 145
Y + E +D+ L+F N YN VHVM + L F+EKW + PK + +
Sbjct: 315 ---YSTLEEFESDILLMFNNCFTYNPPGTPVHVMGRQLENVFKEKW-EARPKFDDATLVK 370
Query: 146 QEEEEAKAQLD----MQLTQEAVQTNKAKELRSELNEVDMQLENLRETV-IQKCRKMS-- 198
Q+E E A D + + N AK VD Q+ L++T+ K +KM+
Sbjct: 371 QQEAETDALFDNGEEEEALMSEEEINGAK-----FAAVDKQISMLQDTLEAMKAKKMNRM 425
Query: 199 --------TEEKKNLGTAL--------TRLSPEDLCKALEIVAENNPSFHATAQEVDLDM 242
T+E + A+ LS E L EI+ E P T E+++D+
Sbjct: 426 RKPRRRDLTKEYGPITYAMQNELAERCNYLSAEQLSNVAEILREEMPWLRDT-DEIEIDV 484
Query: 243 DAQSELTLWRLKVFV 257
R+ +V
Sbjct: 485 GNMKPEVFHRIYRYV 499
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 7/120 (5%)
Query: 16 KKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDF 75
KK+ G VRQ + + K + PF PVD + DY +++ PMD
Sbjct: 78 KKIRGSGMPPPQQKYCLAIVRQ----LKRTKNSAPFKVPVDPIKQNIPDYPTIVKNPMDL 133
Query: 76 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
TI+ K+ + Y +E D+ L+F N YN V M K+L E FE + QL
Sbjct: 134 GTIEKKLTSYE---YSVPQEFIDDMNLMFSNCFLYNGTESPVGSMGKALQEVFERQLKQL 190
>gi|432110957|gb|ELK34430.1| Bromodomain testis-specific protein, partial [Myotis davidii]
Length = 842
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 13/103 (12%)
Query: 41 FITQH-KWAWPFMHPVDVEGLGLHDYYEVIEKPMD-------FSTIKNKMDGKDGTGYRN 92
F +H +AWPF +PVDV LGLH+YY++++ PMD F+ + KMD ++ Y++
Sbjct: 238 FAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGNPEFLFTIL--KMDNQE---YKD 292
Query: 93 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E ADVRL+F N +YN +V MA+ L + FE + ++
Sbjct: 293 AYEFAADVRLMFMNCYRYNPPDHEVVTMARMLQDVFEMHFAKI 335
>gi|268576585|ref|XP_002643272.1| Hypothetical protein CBG08144 [Caenorhabditis briggsae]
Length = 414
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+ +PF PVD LGL DY+E+I+KPMD ST+K K+ G++ Y N E D +L+ N
Sbjct: 141 YTFPFRTPVDTVALGLTDYHEIIKKPMDMSTMKKKIVGEE---YDNAGEFKEDFKLMINN 197
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
+ YN++ D V MA + F KW ++ P
Sbjct: 198 CLSYNNDGDPVSDMAIKFRKAFAAKWNKVFP 228
>gi|384486789|gb|EIE78969.1| hypothetical protein RO3G_03674 [Rhizopus delemar RA 99-880]
Length = 489
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 120/250 (48%), Gaps = 48/250 (19%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
++PF++PVD L + DY +++ PMD STI+ K++ + Y + AD++L+F N
Sbjct: 208 SFPFLYPVDPVALNIPDYPTIVKHPMDLSTIETKLNRNE---YDSPDAFAADIKLMFDNC 264
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTN 167
YN ++ +AK L F+EKW Q +V+EE+ ++ +K + QE V
Sbjct: 265 YLYNPPHLPIYDLAKQLQAIFDEKWAQRPTEVIEEQPAKKRRISKVN---RANQEDVTI- 320
Query: 168 KAKELRSELNEVDMQLENL--------------------RET---------VIQKCRKMS 198
EL + + Q+E++ +ET + K R+MS
Sbjct: 321 --AELERHIATISQQIESIKSSSSKKSPKKRTTRPSPAKKETGTPPKKKKKRMTKYREMS 378
Query: 199 T---------EEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATA-QEVDLDMDAQSEL 248
+ E+K+ L ++ L+ + L + ++I+ + P+ + +E++LD+D+
Sbjct: 379 SDEEDSGFTFEQKRQLSESINNLTGDQLNEVVDIIRSSMPNLDSVGEEEIELDIDSLDIN 438
Query: 249 TLWRLKVFVQ 258
TL RL +V+
Sbjct: 439 TLTRLNDYVK 448
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 16 KKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDF 75
K+L G + ++ +++ R+ + +H+ A PF++PVD L + DY +VI++P+D
Sbjct: 23 KQLSITGGRPMTKDQMKYCAAIMRN-LKKHRDAAPFLNPVDYIKLNVPDYPQVIKRPIDL 81
Query: 76 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ I K++ + Y V + ADVRLVF N KYN + V+ +++ FE+ Q+
Sbjct: 82 TLIDQKLNQNE---YVTVDDFVADVRLVFNNCFKYNGPEAMISVLCQNVESAFEKGLRQM 138
Query: 136 LPKVME 141
P + E
Sbjct: 139 PPSLDE 144
>gi|299472993|emb|CBN77394.1| Zinc finger, TAZ-type [Ectocarpus siliculosus]
Length = 1359
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 59/103 (57%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
++ W F PVD L L DY+E+I PMD T+ K+ + GY E ADV+LVF
Sbjct: 430 QFGWVFNDPVDPVHLNLPDYFEIITHPMDLGTVARKLAKEGAGGYLEHEEFAADVQLVFD 489
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEE 148
NAMKYN +V+ +A+ + ++F + W L ++ EE ++E
Sbjct: 490 NAMKYNGPESEVYPVAERMKKEFNKDWALALKRMEAEENGRKE 532
>gi|261199936|ref|XP_002626369.1| transcription regulator BDF1 [Ajellomyces dermatitidis SLH14081]
gi|239594577|gb|EEQ77158.1| transcription regulator BDF1 [Ajellomyces dermatitidis SLH14081]
gi|239607966|gb|EEQ84953.1| transcription regulator BDF1 [Ajellomyces dermatitidis ER-3]
Length = 898
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKN 106
A PF +PVD L + Y+ +I+KPMD T++ ++ TG Y N +E+ AD+RL+FKN
Sbjct: 550 ALPFYYPVDPVALNIPTYHSIIKKPMDLQTVQTRLQ----TGQYENAKEMEADIRLIFKN 605
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
K+N D + KSL E F+ KW Q
Sbjct: 606 CYKFNIPGDPTYNAGKSLEEVFDNKWSQ 633
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 26 LSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 85
L+ L+F VR + H + F PVD L + +Y +I++PMD TI+ K+ K
Sbjct: 327 LTTKQLKFLVRCIQGLKRVHDSRF-FREPVDPVKLNIPNYPLIIKQPMDLRTIEEKL--K 383
Query: 86 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 145
G+ Y ++ + +D L+ N++ +N V V L + F E+ L LP E E
Sbjct: 384 SGS-YASLAAVISDFDLMIDNSVTFNGPEHMVSVEGLRLKQNF-ERHLAKLPGPDEVETS 441
Query: 146 QEEEEAK 152
+++AK
Sbjct: 442 PAQKKAK 448
>gi|357134548|ref|XP_003568879.1| PREDICTED: transcription factor GTE8-like, partial [Brachypodium
distachyon]
Length = 574
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 35 VRQARSFITQ---HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYR 91
RQ ++ + + H W F PVD G+ DY++VI PMD T+K K+ K+ Y
Sbjct: 63 ARQCKNVLEKLMGHTGGWLFHEPVDPVLFGIPDYFDVIRNPMDLGTVKKKLTNKN---YP 119
Query: 92 NVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
+ E ADVRL F NAMKYN + VH +A+ L F+ +W
Sbjct: 120 STDEFAADVRLTFSNAMKYNPPGNFVHTVAEQLNGIFDSEW 160
>gi|313232668|emb|CBY19338.1| unnamed protein product [Oikopleura dioica]
Length = 814
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
L F ++ + +H+ +WPF PVD L L DYYEV++KPMD STIK K D Y
Sbjct: 17 LDFIRKEILVKVQKHQHSWPFQKPVDPVALALPDYYEVVKKPMDLSTIKKKF---DTYQY 73
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEE 130
+ E +D ++F N YN DDV +M +++ F++
Sbjct: 74 NSGAEALSDFEVMFSNCYLYNKPTDDVTLMCQAVESAFKD 113
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM-DGKDGTGYRNVREIYADVRLVFKNAMK 109
F PVD + L L DY ++I PMD T++ K+ DGK Y + E+ D+ L+F N +
Sbjct: 245 FYEPVDYKKLKLPDYPKIITHPMDMGTVRQKLVDGK----YSDPMEVQKDMELMFHNCYR 300
Query: 110 YNDERDDVHVMAKSLLEKFEEKW 132
YN + V AK L F + W
Sbjct: 301 YNPPSNSVVKAAKKLDTIFHKIW 323
>gi|120431733|ref|NP_001073342.1| bromodomain testis-specific protein isoform B [Mus musculus]
Length = 326
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF R + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 31 LQFLQRVVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENK---YY 87
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ VMA++L + F +K Q+
Sbjct: 88 EKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALEKLFMQKLSQM 132
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 79
+AWPF +PVD + LGLH+YY+V++ PMD TIK
Sbjct: 290 YAWPFYNPVDADALGLHNYYDVVKNPMDLGTIK 322
>gi|308804515|ref|XP_003079570.1| Protein involved in transcription initiation at TATA-containing
promoters; associates with the basal transcription
factor TFIID; contains two bromodom (ISS) [Ostreococcus
tauri]
gi|116058025|emb|CAL54228.1| Protein involved in transcription initiation at TATA-containing
promoters; associates with the basal transcription
factor TFIID; contains two bromodom (ISS) [Ostreococcus
tauri]
Length = 446
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 120/291 (41%), Gaps = 61/291 (20%)
Query: 34 FVRQARSFIT---QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
VR+ R + +H++ F+ PVD G+ DY ++++ PMD T+K K+D + Y
Sbjct: 60 MVRRCREVLNLTKKHRYHKIFLFPVDPVRQGIPDYPQIVKNPMDLGTVKRKLDERK---Y 116
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ---------------- 134
+ AD+RL+F N YN + D +M +++ + FE WLQ
Sbjct: 117 VGPEDFCADMRLIFSNCALYNGSQSDAGIMGETVHQGFEAAWLQSGLDDWTASEQTIRAQ 176
Query: 135 ---------LLPKVME------------------EEKRQEEEEAKAQLDMQLTQEAVQTN 167
P +E EE ++ ++EA D + A+Q
Sbjct: 177 EEIDIRNTPTTPISVEAVAVQEAREQLENMRREIEELKRAKQEAIPSRDRSRVRAALQER 236
Query: 168 KAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKN-----------LGTALTRLSPED 216
+E+R ++ +T + R+ + EKK+ GT + S
Sbjct: 237 NEREIRMKIRTSTSMTHEWTKTCTESSRRRAEREKKSSARLVLRWLCPSGTCHSMKSTNS 296
Query: 217 LCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 266
C+ ++IV+E A E++++++ TLW+L +V+ L+ R
Sbjct: 297 RCRVIQIVSEQRKGLGQADDDEIEINIEELDSETLWKLDKYVRGVLRPKKR 347
>gi|62086391|dbj|BAD91553.1| bromodomain-containing protein [Mus musculus]
Length = 326
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF R + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 31 LQFLQRVVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENK---YY 87
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ VMA++L + F +K Q+
Sbjct: 88 EKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALEKLFMQKLSQM 132
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 79
+AWPF +PVD + LGLH+YY+V++ PMD TIK
Sbjct: 290 YAWPFYNPVDADALGLHNYYDVVKNPMDLGTIK 322
>gi|255557483|ref|XP_002519772.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223541189|gb|EEF42745.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 570
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 34 FVRQARSFITQ---HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
+ Q S + H W F PVD E L + DY+ VI PMD T+K+K++ Y
Sbjct: 82 VIHQCTSLVKSLMNHPCGWVFKEPVDPEKLEIPDYFSVITNPMDLGTVKSKLENNQ---Y 138
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E ADVRL F NA+ YN + VH MA+ L + FE +W L
Sbjct: 139 FGAEEFAADVRLTFSNALLYNPPLNYVHKMAEKLKKIFETRWKAL 183
>gi|145347283|ref|XP_001418103.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578331|gb|ABO96396.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 859
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 34 FVRQARSFIT---QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
+R+ R + +HK+ F+ PVD + G+ DY+++I+ PMD T+K K+D K Y
Sbjct: 271 MIRRCREVLIASKKHKYHKIFLVPVDPKKHGVPDYFDIIKNPMDMGTVKTKLDTK---AY 327
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 133
N E AD+RL+F N + YN D VM +++ + FE WL
Sbjct: 328 LNPAEFCADMRLIFSNGLLYNGTASDAGVMTETVRQLFETAWL 370
>gi|308498241|ref|XP_003111307.1| CRE-BET-1 protein [Caenorhabditis remanei]
gi|308240855|gb|EFO84807.1| CRE-BET-1 protein [Caenorhabditis remanei]
Length = 856
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 19 LEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 78
L K S L +FF ++ F WPF PV+ LGLHDY+++I++PMD TI
Sbjct: 243 LHPSLKPCSKLLSEFFSKKYNEFT------WPFHDPVNAAELGLHDYHKIIKEPMDMKTI 296
Query: 79 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
K K++ + Y+ + D+RL+ N YN D VH K E F+++W ++
Sbjct: 297 KRKLECGE---YKEPADFERDIRLMLNNCFIYNPIGDPVHNFGKKFEEVFDKRWAEM 350
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 11/106 (10%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+HK WPF PVD L + Y+E + +PMD TI++++ T Y +E D+ V
Sbjct: 57 KHKHVWPFQKPVDAVTLCIPLYHERVLRPMDLKTIESRL---KSTYYTCAQECIDDIETV 113
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 149
F N +N + DDV +MA+++ E ++ K +E+ R+E +
Sbjct: 114 FNNCYTFNGKEDDVTIMAQNVHE--------VIKKSLEQAPREEHD 151
>gi|348686369|gb|EGZ26184.1| hypothetical protein PHYSODRAFT_483048 [Phytophthora sojae]
Length = 2258
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
HK+ W F PVD L + +Y+++I KPMD T+K K++ Y++ E +VR F
Sbjct: 1282 HKFGWVFNTPVDPVALNIPNYFKIIRKPMDLGTVKKKLEAGI---YKHTDEFANEVRTTF 1338
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQL 155
+NAM+YN E DV+ +AK +L F + ++ ++ +EK +E+ +L
Sbjct: 1339 ENAMQYNSEDQDVYSLAKDMLSDFNGEMRKVAAEIDVDEKAARAKESSCRL 1389
>gi|326492620|dbj|BAJ90166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 59/123 (47%), Gaps = 9/123 (7%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H W F PVD + G+ DY++VI PMD T+K K+ K Y + + ADVRL F
Sbjct: 94 HPGGWLFHKPVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKS---YLSTDDFAADVRLTF 150
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAV 164
NAM YN + VH +A+ L F +W E K + QL M++ + V
Sbjct: 151 SNAMTYNPPGNQVHTVAEQLNIMFNSEWTSY------ERKWIDRNLKPVQLPMKVIKAHV 204
Query: 165 QTN 167
N
Sbjct: 205 AVN 207
>gi|226289996|gb|EEH45480.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 908
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKN 106
A PF HPVD L + Y+ VI+KPMD T++ K+ TG Y N +E+ AD+RL+FKN
Sbjct: 561 AAPFYHPVDPVALNIPTYHSVIKKPMDLQTVQTKLR----TGQYENAKEMEADIRLMFKN 616
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
K+N D KS+ E F+ KW Q
Sbjct: 617 CYKFNIPGDPTFNAGKSMEELFDNKWSQ 644
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
F PVD L + +Y +I+ PMD T+++K+ K G+ Y +V + AD L+ +N++ +
Sbjct: 361 FREPVDAVKLNIPNYPLIIKNPMDLRTMEDKL--KQGS-YASVDAVIADFNLMIENSVTF 417
Query: 111 NDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 152
N V + ++L + F E+ L LPK E E E++AK
Sbjct: 418 NGADHVVSMEGRNLKQNF-ERHLSKLPKADEVEVTPAEKKAK 458
>gi|224057449|ref|XP_002190567.1| PREDICTED: bromodomain testis-specific protein [Taeniopygia
guttata]
Length = 680
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 21 GGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKN 80
GC+ + LQ+ R + +H ++WPF PVD L L DYY +I+KPMD TIK
Sbjct: 25 SGCQT---NQLQYLQRVVMRAMWRHNFSWPFHQPVDAAALNLPDYYTIIKKPMDLGTIKK 81
Query: 81 KMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
++ + Y E D + +F N YN DD+ MA+ L + F +K ++ P
Sbjct: 82 RL---EHNYYTKAAECIEDFKTMFWNCYMYNKSGDDIVFMAEELEKVFMQKIARMPP 135
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 14 IGKKL-LEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKP 72
I KK+ L G K+ +A L + F ++ ++ AWPF+ P DV + + P
Sbjct: 275 IMKKIQLSGKLKHCNAILKELFSKKHAAY------AWPFIKPEDVASASTGANQAIAKYP 328
Query: 73 MDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 129
D TIK KMD + Y +++E DVRL+F + K N ++ MA+ L + FE
Sbjct: 329 TDLGTIKKKMDNFE---YNDIQEFATDVRLMFMSCYKRNSSDHEIVAMARKLQDVFE 382
>gi|326936108|ref|XP_003214100.1| PREDICTED: bromodomain-containing protein 2-like, partial
[Meleagris gallopavo]
Length = 601
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 59 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 115
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
E D +F N YN DD+ +MA++L + F +K Q+ P+ E
Sbjct: 116 WGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPPEEQE 166
>gi|326434901|gb|EGD80471.1| hypothetical protein, variant [Salpingoeca sp. ATCC 50818]
Length = 905
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 35 VRQARSFITQ------HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGT 88
+R+ R I++ ++AWPF PV + LGL DY + ++ PMD T+K +++
Sbjct: 342 LRECRKIISELFSKKHAEYAWPFYEPVKADELGLSDYRDFVDTPMDLGTVKKRIESGH-- 399
Query: 89 GYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 129
Y +V ADVRLVF N KYN D V MA L FE
Sbjct: 400 -YSDVDSFIADVRLVFSNCYKYNPSTDPVFGMATKLHNVFE 439
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 49 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 108
W F PVD + L + DY +I++PMD T+ K+ + Y + +E D+ L+ N
Sbjct: 201 W-FAQPVDWKALNIPDYPTIIKQPMDLGTVSKKLKERT---YTSAQECIDDIHLMLNNCF 256
Query: 109 KYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
YN + VH+ A+ L F E+ L LP+
Sbjct: 257 VYNPATNPVHIKARELETAF-ERCLHRLPQ 285
>gi|303287933|ref|XP_003063255.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455087|gb|EEH52391.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 120
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK+ + F HPVD LG+ DY +VI+ PMD T+ +K+ GY + RE D R
Sbjct: 27 LKRHKYYFVFEHPVDPVALGIPDYPDVIKDPMDLGTVGDKLARG---GYLHPREFEYDCR 83
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
L F+N YN D H M ++L++FE+ WL +
Sbjct: 84 LTFQNCKTYNSPGTDAHSMGDAMLKEFEKNWLNM 117
>gi|70993850|ref|XP_751772.1| transcription regulator BDF1 [Aspergillus fumigatus Af293]
gi|66849406|gb|EAL89734.1| transcription regulator BDF1, putative [Aspergillus fumigatus
Af293]
Length = 832
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+ WA PF PVD L + Y+ +I+KPMD ST+++K+ K G Y N +E D+R +
Sbjct: 493 HYNWAAPFYFPVDPVALNIPTYHSIIKKPMDLSTVQSKL--KTGQ-YENAKEFEVDMRQI 549
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
FKN K+N D ++ + E FE KW Q
Sbjct: 550 FKNCFKFNIPGDPTYMAGQRFQEIFENKWAQ 580
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
+ PVD + + Y ++I+ PMD TI+ K+ + Y+ + + D L+ +NA+ +
Sbjct: 304 YREPVDPIKMNIPHYPQIIKHPMDLGTIERKLKNNE---YKTAQAVVDDFNLMVQNAVTF 360
Query: 111 NDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQ 146
N V L FE++ + LPK E E+++
Sbjct: 361 NGPDHLVSQEGLKLKGTFEKQMMN-LPKADEVEEKK 395
>gi|224116480|ref|XP_002317311.1| global transcription factor group [Populus trichocarpa]
gi|222860376|gb|EEE97923.1| global transcription factor group [Populus trichocarpa]
Length = 567
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H W F PVD L + DY+ +I PMD T+K+K+ GK+ Y +++E D+RL F
Sbjct: 100 HPAGWVFNKPVDPVALNIPDYFSIISIPMDLGTVKSKL-GKNC--YASIKEFADDIRLTF 156
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
NAM YN ++VH MA+ L FE W L
Sbjct: 157 SNAMLYNPPTNNVHKMAEELNGIFETSWKAL 187
>gi|261278845|pdb|3JVJ|A Chain A, Crystal Structure Of The Bromodomain 1 In Mouse Brd4
gi|261278846|pdb|3JVK|A Chain A, Crystal Structure Of Bromodomain 1 Of Mouse Brd4 In
Complex With Histone H3-K(Ac)14
gi|302566174|pdb|3MUK|A Chain A, Crystal Structure Of Brd4 Bromodomain 1 With Propionylated
Histone H3- K(Prop)23
gi|302566176|pdb|3MUL|A Chain A, Crystal Structure Of Brd4 Bromodomain 1 With Butyrylated
Histone H3- K(Buty)14
Length = 131
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 26 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 82
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 83 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 123
>gi|340721599|ref|XP_003399205.1| PREDICTED: bromodomain-containing protein 2-like [Bombus
terrestris]
Length = 388
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H++AWPF PVD + L L DY+++I++PMD TIK ++ + T Y
Sbjct: 71 LQFLQKGVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRL---ENTYY 127
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ +E D +F N YN +DV VMA++L + F K Q+
Sbjct: 128 WSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQM 172
>gi|159125309|gb|EDP50426.1| transcription regulator BDF1, putative [Aspergillus fumigatus
A1163]
Length = 832
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRL 102
+ WA PF PVD L + Y+ +I+KPMD ST+++K+ TG Y N +E D+R
Sbjct: 493 HYNWAAPFYFPVDPVALNIPTYHSIIKKPMDLSTVQSKLK----TGQYENAKEFEVDMRQ 548
Query: 103 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
+FKN K+N D ++ + E FE KW Q
Sbjct: 549 IFKNCFKFNIPGDPTYMAGQRFQEIFENKWAQ 580
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
+ PVD + + Y ++I+ PMD TI+ K+ + Y+ + + D L+ +NA+ +
Sbjct: 304 YREPVDPIKMNIPHYPQIIKHPMDLGTIERKLKNNE---YKTAQAVVDDFNLMVQNAVTF 360
Query: 111 NDERDDVHVMAKSLLEKFEEKWLQLLPKVME-EEKRQEEEEAKAQLDMQLTQEAVQTNKA 169
N V L FE++ + LPK E EEK+ ++ K + + ++ T+ A
Sbjct: 361 NGPDHLVSQEGLKLKGTFEKQMMN-LPKADEVEEKKPKKVSTKTSAAHREPRTSIGTSTA 419
Query: 170 K 170
+
Sbjct: 420 R 420
>gi|296233153|ref|XP_002761896.1| PREDICTED: bromodomain-containing protein 4 [Callithrix jacchus]
Length = 985
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKN 80
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKD 405
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 563 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 622
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 623 ELERYVTSCLR 633
>gi|134105371|pdb|2OSS|A Chain A, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein 4 (Brd4)
gi|308198555|pdb|3MXF|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With The Inhibitor Jq1
gi|312208162|pdb|3P5O|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Ibet Inhibitor
gi|340707484|pdb|2YEL|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
With The Inhibitor Gw841819x
gi|343197715|pdb|3SVF|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Dihydro-Quinazolin Ligand
gi|343197716|pdb|3SVG|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A 3,5-Dimethylisoxazol Ligand
gi|355333223|pdb|3ZYU|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With I-Bet151(Gsk1210151a)
gi|355333224|pdb|3ZYU|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With I-Bet151(Gsk1210151a)
gi|358009753|pdb|3U5J|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Alprazolam
gi|358009754|pdb|3U5K|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009755|pdb|3U5K|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009756|pdb|3U5K|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009757|pdb|3U5K|D Chain D, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009758|pdb|3U5L|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Benzo-Triazepine Ligand (Bzt-7)
gi|371927880|pdb|4A9L|A Chain A, N-Terminal Bromodomain Of Human Brd4 With 1,3-Dimethyl-6-(
Morpholine-4-Sulfonyl)-1,2,3,
4-Tetrahydroquinazolin-2-One
gi|372467090|pdb|3UVW|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k5ack8ac)
gi|372467092|pdb|3UVY|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k16ack20ac)
gi|374074443|pdb|3UVX|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k12ack16ac)
gi|380259062|pdb|3UW9|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|380259063|pdb|3UW9|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|380259064|pdb|3UW9|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|380259065|pdb|3UW9|D Chain D, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|384482557|pdb|4E96|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With The Inhibitor Pfi-1
gi|404312911|pdb|4F3I|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Ms417 Inhibitor
gi|409107327|pdb|4GPJ|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Isoxazolylbenzimidazole Ligand
gi|410563162|pdb|4HBV|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazolin Ligand
gi|410563164|pdb|4HBX|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazolin Ligand
gi|410563165|pdb|4HBY|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazolin Ligand
gi|449802776|pdb|4J0R|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A 3,5-dimethylisoxazol Ligand
gi|449802777|pdb|4J0S|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A 3,5-dimethylisoxazol Ligand
Length = 127
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 22 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 78
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 79 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 119
>gi|313226820|emb|CBY21965.1| unnamed protein product [Oikopleura dioica]
Length = 548
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 108/262 (41%), Gaps = 57/262 (21%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
++AWPF PVDV+GL LHDYY+VI++PMD S + + D Y + E AD+ L+
Sbjct: 252 HQQYAWPFYVPVDVKGLELHDYYDVIKRPMDLSLAQKNI---DNDMYNDKNEFIADIMLI 308
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEA 163
F+N YN +V MA L + FE K + EE + +
Sbjct: 309 FENCRAYNPPDHEVVQMANRLQKVFEAKVAESFSSADAAANHSEESDFGDS-----DSDD 363
Query: 164 VQTNKAKELRSELNEVDMQLENLR------------------------------ETVI-- 191
+ K ++++ +L EV QL L E I
Sbjct: 364 ERGRKLQQIQKKLREVQEQLAYLMDLQARLVKAGKRKKKKGDMGAGKKGGNRDGEGAIYD 423
Query: 192 ----QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVA-------ENNPSFHATAQEVDL 240
+ ++M+ +EK+ L + RL + L + + I+ E+NP E+++
Sbjct: 424 FDSDEDHKEMTYDEKRQLSLDINRLPSDKLGRVVTIIQNREAHYREHNPD------EIEI 477
Query: 241 DMDAQSELTLWRLKVFVQESLK 262
D D TL L +V LK
Sbjct: 478 DFDTLKTATLRELDTYVSFCLK 499
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + HK+AWPF PVD L L DY+ +I+ PMD ST+K K+ G Y
Sbjct: 13 LQYIKKHIFMTLWNHKFAWPFQKPVDPVELNLPDYFTIIKNPMDMSTLKKKLYGGQ---Y 69
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW--LQLLPKVMEEEKRQE 147
+ ++ AD L+F+N YN DD+ +M K + + K + + V+E++KR++
Sbjct: 70 ESAKQCIADYDLMFENCYNYNRPTDDISIMGKKIQDLLHTKCKNMPQVEAVVEKQKRKK 128
>gi|119500410|ref|XP_001266962.1| transcription regulator BDF1, putative [Neosartorya fischeri NRRL
181]
gi|119415127|gb|EAW25065.1| transcription regulator BDF1, putative [Neosartorya fischeri NRRL
181]
Length = 833
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRL 102
+ WA PF PVD L + Y+ +I+KPMD ST+++K+ TG Y N +E D+R
Sbjct: 494 HYNWAAPFYFPVDPVALNIPTYHSIIKKPMDLSTVQSKLK----TGQYENAKEFEVDMRQ 549
Query: 103 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
+FKN K+N D ++ + E FE KW Q
Sbjct: 550 IFKNCFKFNIPGDPTYMAGQRFQEIFENKWAQ 581
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
+ PVD + + Y ++I+ PMD TI+ K+ T Y+ + + D L+ +NA+ +
Sbjct: 305 YREPVDPVKMNIPHYPQIIKHPMDLGTIERKL---KNTEYKTAQAVVDDFNLMVQNAVTF 361
Query: 111 NDERDDVHVMAKSLLE---KFEEKWLQLLPKVME-EEKRQEEEEAKAQLDMQLTQEAVQT 166
N HV+++ L+ FE++ + LPK E EEK+ ++ K + + ++ T
Sbjct: 362 NGPD---HVVSQEGLKLKGTFEKQMMN-LPKADEVEEKKPKKVSTKTSAAHREPRTSIGT 417
Query: 167 NKAK 170
+ A+
Sbjct: 418 STAR 421
>gi|313212448|emb|CBY36425.1| unnamed protein product [Oikopleura dioica]
Length = 548
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 108/262 (41%), Gaps = 57/262 (21%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
++AWPF PVDV+GL LHDYY+VI++PMD S + + D Y + E AD+ L+
Sbjct: 252 HQQYAWPFYVPVDVKGLELHDYYDVIKRPMDLSLAQKNI---DNDMYNDKNEFIADIMLI 308
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEA 163
F+N YN +V MA L + FE K + EE + +
Sbjct: 309 FENCRAYNPPDHEVVQMANRLQKVFEAKVAESFSSADAAANHSEESDFGDS-----DSDD 363
Query: 164 VQTNKAKELRSELNEVDMQLENLR------------------------------ETVI-- 191
+ K ++++ +L EV QL L E I
Sbjct: 364 ERGRKLQQIQKKLREVQEQLAYLMDLQARLVKAGKRKKKKGDMGAGKKGGNRDGEGAIYD 423
Query: 192 ----QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVA-------ENNPSFHATAQEVDL 240
+ ++M+ +EK+ L + RL + L + + I+ E+NP E+++
Sbjct: 424 FDSDEDHKEMTYDEKRQLSLDINRLPSDKLGRVVTIIQNREAHYREHNPD------EIEI 477
Query: 241 DMDAQSELTLWRLKVFVQESLK 262
D D TL L +V LK
Sbjct: 478 DFDTLKTATLRELDTYVSFCLK 499
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + HK+AWPF PVD L L DY+ +I+ PMD ST+K K+ Y
Sbjct: 13 LQYIKKHIFMTLWNHKFAWPFQKPVDPVELNLPDYFTIIKNPMDMSTLKKKLYSGQ---Y 69
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW--LQLLPKVMEEEKRQE 147
+ ++ AD L+F+N YN DD+ +M K + + K + + V+E++KR++
Sbjct: 70 ESAKQCIADYDLMFENCYNYNRPTDDISIMGKKIQDLLHTKCKNMPQVEAVVEKQKRKK 128
>gi|410563163|pdb|4HBW|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazoline Ligand
Length = 127
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 22 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 78
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 79 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 119
>gi|167395679|ref|XP_001741703.1| bromodomain-containing protein [Entamoeba dispar SAW760]
gi|165893699|gb|EDR21839.1| bromodomain-containing protein, putative [Entamoeba dispar SAW760]
Length = 481
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
A PF+ PVD L DYY VI PMD STI K + G Y ++ + DVRLVFKNA
Sbjct: 284 ANPFLTPVDPIAQNLPDYYVVIRHPMDLSTITKKF--RYGI-YEHIDDFANDVRLVFKNA 340
Query: 108 MKYNDERDDVHVMAKSLLEKFEEK 131
MKYN R+ +H+ A +LL F+++
Sbjct: 341 MKYNPPRNTIHIFASTLLRYFDDQ 364
>gi|326434902|gb|EGD80472.1| hypothetical protein PTSG_13143 [Salpingoeca sp. ATCC 50818]
Length = 1105
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 35 VRQARSFITQ------HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGT 88
+R+ R I++ ++AWPF PV + LGL DY + ++ PMD T+K +++
Sbjct: 342 LRECRKIISELFSKKHAEYAWPFYEPVKADELGLSDYRDFVDTPMDLGTVKKRIESGH-- 399
Query: 89 GYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 129
Y +V ADVRLVF N KYN D V MA L FE
Sbjct: 400 -YSDVDSFIADVRLVFSNCYKYNPSTDPVFGMATKLHNVFE 439
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 30 LLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 89
+Q V + S + W F PVD + L + DY +I++PMD T+ K+ +
Sbjct: 184 FMQDVVLKRLSALDSKHW---FAQPVDWKALNIPDYPTIIKQPMDLGTVSKKLKER---T 237
Query: 90 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
Y + +E D+ L+ N YN + VH+ A+ L F E+ L LP+
Sbjct: 238 YTSAQECIDDIHLMLNNCFVYNPATNPVHIKARELETAF-ERCLHRLPQ 285
>gi|449802362|pdb|4DON|A Chain A, Brd4 Bromodomain 1 Complex With A Fragment
3,4-dihydro-3-methyl-2(1h)- Quinazolinon
Length = 145
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 42 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 98
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 99 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 139
>gi|412988890|emb|CCO15481.1| bromodomain-containing protein [Bathycoccus prasinos]
Length = 947
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
Query: 36 RQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 95
R + + ++K+ W F PVD LG+ DYYE+++ PMD +K K+DGK Y +
Sbjct: 330 RDVLNHVKRNKFHWIFTQPVDAVKLGIPDYYEIVKNPMDLGKVKEKLDGKK---YTWPTD 386
Query: 96 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQL 155
D+RL+F N YN D M +++ FEE W+ K E+K +EE+ + +
Sbjct: 387 FADDMRLIFDNCALYNGTTTDAGQMGETVRGAFEEGWV----KYNVEQKMSDEEDIRTKE 442
Query: 156 DMQLT 160
D+++
Sbjct: 443 DIEIA 447
>gi|353240913|emb|CCA72759.1| hypothetical protein PIIN_06697 [Piriformospora indica DSM 11827]
Length = 871
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 103/240 (42%), Gaps = 35/240 (14%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+A+PF PVD L + Y +VI+KPMD +T+ +K+ + Y N Y D +L+ KN
Sbjct: 541 FAYPFYEPVDYIKLEIPHYPKVIKKPMDMATMSSKLSNHE---YPNATAFYNDFKLMIKN 597
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQT 166
+N VH L F+EKW L + + EE+E+ A+ + Q
Sbjct: 598 CFAFNPAGTPVHQAGVELNAVFDEKWQGLPNPYGDSDDGAEEDESDAERSNAVMMMEAQI 657
Query: 167 NKAKELRSELNEV----------DMQLENLRETVIQKCRK-------------------M 197
+ L S L ++ +M + ++ + K +
Sbjct: 658 ---QSLHSALEQLKKPKKEKKPKNMGMPSMPKPPKAPSNKPPGAGGFKKKKKPTEDEDTL 714
Query: 198 STEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 257
S E+KK L + L L K LEI+ E P T++E++LD+D+ L RL FV
Sbjct: 715 SFEQKKQLSETIQTLDGNRLEKVLEIIDEVYPEIRETSEEIELDIDSLPSHVLNRLYNFV 774
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKN-----KMDGKDGTGYRNVREIYADV 100
K A PF+ PVD L + Y ++I PMD ST++ KMD Y NV E AD+
Sbjct: 352 KDAIPFLVPVDPVALNIPHYPQIITNPMDLSTVEKKLGGAKMDTAQYARYANVDEFVADI 411
Query: 101 RLVFKNAMKYNDERDDVHVMAKSLLEKFE 129
+L+ +N K+N V MA + E+F+
Sbjct: 412 KLIIENCAKFNGPEHPVTQMALRMEEQFD 440
>gi|412985439|emb|CCO18885.1| unnamed protein product [Bathycoccus prasinos]
Length = 1101
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 10/102 (9%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-------YRNVR--EI 96
K+++PF+ VD L + DY++VI PMDF TI +++ +D G Y N EI
Sbjct: 548 KYSFPFLEKVDPVALNIPDYFDVISDPMDFGTIFKRLEPEDEKGVPIEPTYYTNESDPEI 607
Query: 97 YA-DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
+A DVRLVF NA +YN V+V A+ L + FE +W Q P
Sbjct: 608 FANDVRLVFANAFRYNQPGTFVYVCAEKLAQIFEREWSQKFP 649
>gi|440789954|gb|ELR11245.1| bromodomain domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 119
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +H++AWPF HPVD LG+ DY +I++PMD +TI++K++ GT Y V DV+
Sbjct: 13 LARHRYAWPFAHPVDYVALGVPDYPMIIQRPMDLATIRDKLEA--GT-YELVSAFLDDVQ 69
Query: 102 LVFKNAMKYNDERDDVHVMAKSL 124
LV+ NA YN DV +MA ++
Sbjct: 70 LVWSNAKVYNPPGSDVVIMADAM 92
>gi|312373442|gb|EFR21185.1| hypothetical protein AND_17423 [Anopheles darlingi]
Length = 401
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
+ F +R + +H+++WPF PVD + L L DY+++I++PMD TIK +++ Y
Sbjct: 69 IHFLLRTVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLENNY---Y 125
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
+ +E D +F N YN +DV VMA++L + F K + L+PK
Sbjct: 126 WSAKECIKDFNTMFTNCYVYNKPGEDVVVMAQTLEKLFLTK-VSLMPK 172
>gi|301118949|ref|XP_002907202.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105714|gb|EEY63766.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 786
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD-VRLVFKN 106
A PFM PVD LG+ DY+ VI++PMD TI+N ++ +G+ + +A+ VRL F+N
Sbjct: 293 AAPFMAPVDPVALGIPDYFHVIKEPMDLGTIRNNLE----SGFYDSPSDFAEHVRLTFRN 348
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKW 132
A YN VH+ A+ L++ FE+++
Sbjct: 349 ATLYNAAHSQVHIYARKLVDDFEKRF 374
>gi|448081188|ref|XP_004194827.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
gi|359376249|emb|CCE86831.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
Length = 645
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+ +++PF+ PVD L + +Y+E+I++PMD ST+++K+ Y N E DVRL+
Sbjct: 335 HYSYSFPFLTPVDAVALNIPNYHEIIKEPMDLSTVQSKLANNQ---YENGDEFERDVRLI 391
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
FKN +N E DV++M L F++KW
Sbjct: 392 FKNCYTFNPEGTDVNMMGHRLESVFDKKW 420
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 34 FVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 93
F + I + + A PF+HPVD L + YY I++PMD STI+ K+ Y +
Sbjct: 159 FAQTTIKAIKRLRDAGPFLHPVDTVKLNVPFYYNYIKRPMDLSTIERKL---AVNAYEDP 215
Query: 94 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 140
++ D L+ N +K+N E + MAK+ FE+ L + PKV+
Sbjct: 216 SQVVDDFNLMVSNCIKFNGENSGISKMAKNTQAHFEKHMLNMPPKVL 262
>gi|448085671|ref|XP_004195918.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
gi|359377340|emb|CCE85723.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
Length = 637
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+ +++PF+ PVD L + +Y+E+I++PMD ST+++K+ Y N E DVRL+
Sbjct: 327 HYSYSFPFLTPVDAVALNIPNYHEIIKEPMDLSTVQSKLANNQ---YENGDEFEHDVRLI 383
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
FKN +N E DV++M L F++KW
Sbjct: 384 FKNCYTFNPEGTDVNMMGHRLESVFDKKW 412
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 34 FVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 93
F + I + + A PF+HPVD L + YY I++PMD STI+ K+ Y +
Sbjct: 151 FAQTTIKAIKRLRDAGPFLHPVDTVKLNVPLYYNYIKRPMDLSTIERKI---AVNAYEDP 207
Query: 94 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 140
++ D L+ N +K+N E + MAK+ FE+ L + PKV+
Sbjct: 208 SQVVDDFNLMVSNCIKFNGENSGISKMAKNTQAHFEKHMLNIPPKVL 254
>gi|395334140|gb|EJF66516.1| Bromodomain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 798
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 41/257 (15%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
++ A PF PVD +G+ +Y ++++KPMD ST+K K+D D Y + D RL+
Sbjct: 466 HYQIAHPFYEPVDPIKMGIPEYPKIVKKPMDLSTMKRKLDTGD---YPTPEKFRDDFRLM 522
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-LPKVME------EEKRQEEEEAKAQL- 155
KN M +N + VH KSL F+EKW L +P+ + EE E ++ +A++
Sbjct: 523 VKNCMTFNPPGNPVHEAGKSLQNLFDEKWKNLPIPRSHDLSDDEDEEDEYESDDERARME 582
Query: 156 ----DMQLTQEAVQTNKAKELR----------------SELNEVDMQLENLRETVIQKCR 195
DM+ +++ N A R + + +QK +
Sbjct: 583 GMIADMESQIASMKNNLAALKRNGKEKEKKKEKREKPTPPVASTSKSAPKHSKAPLQKSK 642
Query: 196 K----------MSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQ 245
K ++ E+KK+L +++L L K ++I+ + P + +E++L++D
Sbjct: 643 KGKKPVTDDDVLTFEQKKDLSDTISKLDGAKLEKVIQIIHDGVPEIRDSTEEIELEIDQL 702
Query: 246 SELTLWRLKVFVQESLK 262
L +L FV +K
Sbjct: 703 PAAVLTKLYNFVIRPMK 719
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 12/133 (9%)
Query: 21 GGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKN 80
G LS + +F R+ + + K A PF++PVD LG+ Y +VI++PMDFSTI+
Sbjct: 241 AGPSTLSVAQWRFSSSTVRT-LKKMKDAGPFLNPVDPVALGIPHYPQVIKRPMDFSTIER 299
Query: 81 KMDGKDGTG---------YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
K+ + Y + + DVRL+F N + +N V M K + F+++
Sbjct: 300 KLAASNPAKPDPNPSNPRYHHAEQFVQDVRLIFTNCVTFNGPDHPVTQMGKRVEAVFDKQ 359
Query: 132 WLQLLPKVMEEEK 144
Q+ P EE K
Sbjct: 360 IKQMPPP--EEPK 370
>gi|303275083|ref|XP_003056841.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
gi|226461193|gb|EEH58486.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
Length = 854
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 9/163 (5%)
Query: 34 FVRQARSFIT---QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK-DGTG 89
+R+ R +T ++K A F PVD +GL DY+++I+ PMDF T+K ++D K GT
Sbjct: 246 LIRKCREVLTLTRKNKDARIFAMPVDPMKMGLPDYFDIIKNPMDFGTVKQRLDSKAAGTA 305
Query: 90 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW----LQLLPKVMEEEKR 145
Y + E Y DV L N YN V M +S+ FE+ W L+ +E +
Sbjct: 306 YDHPMEFYRDVTLTLDNCRLYNKADSVVGTMGESVRADFEKHWAAAELEAKAADEDEYRA 365
Query: 146 QEEEEAKAQLDMQLTQEAVQTNK-AKELRSELNEVDMQLENLR 187
EE A+ D + +E ++ +K E+ +L EV QLE +
Sbjct: 366 SEEAIIAAEPDDPVEEEVLEESKQVSEINRQLAEVQRQLEEFK 408
>gi|384245392|gb|EIE18886.1| hypothetical protein COCSUDRAFT_45033 [Coccomyxa subellipsoidea
C-169]
Length = 554
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 29/243 (11%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG----YRNVREIYADVRLVFKN 106
F+ PVD L + DY++ ++ PM + + K+ G Y++V E D+R +++N
Sbjct: 2 FVEPVDPVKLKIVDYFQYVKNPMALNDVAGKLSHNPAKGSFRKYKDVYEFRDDMRQIWEN 61
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQT 166
YN V + E +E+KW + E++ EEE+ + + E
Sbjct: 62 CRLYNPIGQPVRTNGDWMSEYWEKKW-----AISGIEQKWEEEQLRQR------HEETML 110
Query: 167 NKAKELRSELNEVDMQLENLR----ETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALE 222
EL + E+D +L L+ E R M+ EEK+ L L LS + L +E
Sbjct: 111 AGGPELPHHMEEMDRELRMLQQQDGEVAAPGNRPMTFEEKRRLSQGLGSLSGDKLGLVME 170
Query: 223 IVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQ--------ESLKAASRSSGDMGGN 274
I+AE EV++D+D ++ TLWRL V ++ A R GD G
Sbjct: 171 IIAECQRIDQEA--EVEVDIDDLNQDTLWRLNALVTDMSIGRVLDTGGATMREGGDGAGG 228
Query: 275 NNN 277
N+
Sbjct: 229 ANH 231
>gi|327270741|ref|XP_003220147.1| PREDICTED: bromodomain testis-specific protein-like [Anolis
carolinensis]
Length = 900
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F QH+ +AW F P+DV GL DY +V++ PMD TIK KM + Y++ +E AD
Sbjct: 329 FSKQHEAYAWLFYKPIDVTAPGLEDYNDVVKCPMDLGTIKKKM---ENNAYKDTQEFAAD 385
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFE 129
+RL+F N +Y+ +V MA+ L + FE
Sbjct: 386 IRLMFMNCYRYSSPDQEVVTMARKLQDVFE 415
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD GL L DYY +I+ PMD +TI+ ++ + Y
Sbjct: 75 LQYLQKVVMKAMWRHSFSWPFHQPVDAAGLKLPDYYNIIKNPMDLTTIQKRL---EHNYY 131
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E + + +F N YN DD+ MA+ L + F +K Q+
Sbjct: 132 TCAAECIENFKTMFANCYLYNKPGDDIVFMAQELEKVFMQKIAQM 176
>gi|225559913|gb|EEH08195.1| bromodomain-containing protein BDF1 [Ajellomyces capsulatus G186AR]
Length = 501
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKN 106
A PF +PVD L + Y+ +I+KPMD T++ K+ TG Y N +E+ ADVRL+FKN
Sbjct: 157 AIPFYYPVDPVALNIPTYHSIIKKPMDLQTVQTKLQ----TGQYENAKEMEADVRLMFKN 212
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
K+N D + KSL E F+ KW Q
Sbjct: 213 CYKFNIPGDPTYNSGKSLEEVFDNKWSQ 240
>gi|67483926|ref|XP_657183.1| bromodomain protein [Entamoeba histolytica HM-1:IMSS]
gi|56474427|gb|EAL51797.1| bromodomain protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449704936|gb|EMD45090.1| bromo domain containing protein [Entamoeba histolytica KU27]
Length = 485
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
A PF+ PVD L DYY VI PMD +TI K + G Y ++ + DVRLVFKNA
Sbjct: 288 ASPFLTPVDPIAQNLPDYYVVITHPMDLNTITKKF--RYGI-YEHIDDFANDVRLVFKNA 344
Query: 108 MKYNDERDDVHVMAKSLLEKFEEK 131
MKYN R+ +H+ A +LL F+++
Sbjct: 345 MKYNPPRNTIHIFASTLLRYFDDQ 368
>gi|154287696|ref|XP_001544643.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408284|gb|EDN03825.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 627
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKN 106
A PF +PVD L + Y+ +I+KPMD T++ K+ TG Y N +E+ ADVRL+FKN
Sbjct: 283 AIPFYYPVDPVALNIPTYHSIIKKPMDLQTVQTKLQ----TGQYENAKEMEADVRLMFKN 338
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
K+N D + KSL E F+ KW Q
Sbjct: 339 CYKFNIPGDPTYNSGKSLEEVFDNKWSQ 366
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 5/127 (3%)
Query: 26 LSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 85
L+A +F VR + H + F PVD L + +Y +I++PMD TI+ K+ K
Sbjct: 74 LTAKQSKFLVRCIQGLKRVHDSRF-FREPVDPVKLNIPNYPLIIKQPMDLRTIEEKL--K 130
Query: 86 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 145
G+ Y ++ + +D L+ N++ +N V + +L + F E+ L LP E E
Sbjct: 131 AGS-YTSLFAVTSDFDLMVDNSVTFNGPEHVVSMEGANLKQSF-ERHLAKLPGPDEVETS 188
Query: 146 QEEEEAK 152
+++A+
Sbjct: 189 PAQKKAQ 195
>gi|407044057|gb|EKE42339.1| bromodomain containing protein [Entamoeba nuttalli P19]
Length = 485
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
A PF+ PVD L DYY VI PMD +TI K + G Y ++ + DVRLVFKNA
Sbjct: 288 ASPFLTPVDPIAQNLPDYYVVITHPMDLNTITKKF--RYGI-YEHIDDFANDVRLVFKNA 344
Query: 108 MKYNDERDDVHVMAKSLLEKFEEK 131
MKYN R+ +H+ A +LL F+++
Sbjct: 345 MKYNPPRNTIHIFASTLLRYFDDQ 368
>gi|341892468|gb|EGT48403.1| hypothetical protein CAEBREN_29751 [Caenorhabditis brenneri]
Length = 283
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 52 MHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKNAMKY 110
M PVD E LGLHDY+++I++P+D TI+ KMD TG Y+ + D+RL+ N Y
Sbjct: 1 MEPVDAEKLGLHDYHKIIKEPIDLKTIRTKMD----TGVYKEPADFAHDIRLMLNNCFLY 56
Query: 111 NDERDDVHVMAKSLLEKFEEKWLQL 135
N D VH+ E FE++W +L
Sbjct: 57 NPVGDPVHIFGMKFKEVFEKRWAEL 81
>gi|444524033|gb|ELV13688.1| Epoxide hydrolase 3 [Tupaia chinensis]
Length = 941
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKSPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 77 TIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+K+K++ ++ YR+ +E ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 204 PVKSKLEARE---YRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 259
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 399 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 458
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 459 ELERYVTSCLR 469
>gi|345565069|gb|EGX48025.1| hypothetical protein AOL_s00081g352 [Arthrobotrys oligospora ATCC
24927]
Length = 890
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 44 QH-KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRL 102
QH A+PF +PVD L + DY+++I+KPMD S I+ K++ + Y N E AD+RL
Sbjct: 543 QHNSIAYPFYNPVDPVALEIPDYFKIIKKPMDMSEIQRKLNHNE---YNNSNEFEADIRL 599
Query: 103 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
+F N K+N V+ K L F+EKW Q
Sbjct: 600 MFNNCYKFNPPSSPVYDCGKQLEAVFDEKWSQ 631
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
I + K A F++PVD L L Y+E+I+ PM I+ K+ + Y N E+ DV
Sbjct: 319 IKRLKDAQAFLNPVDPVKLQLPTYFEIIKNPMSLFDIEKKLTANE---YHNPAELKGDVH 375
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
L+ +N++ +N H + +S + +K+L L K+ E
Sbjct: 376 LMVQNSILFNGVE---HAVTQSGIH-IRDKYLHALEKMPPAE 413
>gi|17551634|ref|NP_508124.1| Protein F13C5.2 [Caenorhabditis elegans]
gi|351061577|emb|CCD69431.1| Protein F13C5.2 [Caenorhabditis elegans]
Length = 374
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 43 TQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRL 102
T + +PF PVDV LGL DY+EVI+KPMD STI+ K+ G++ Y E D +L
Sbjct: 133 THDSFTFPFRKPVDVVLLGLTDYHEVIKKPMDMSTIRKKLIGEE---YDTAVEFKEDFKL 189
Query: 103 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
+ N + YN+E D V A +KF KW + P+
Sbjct: 190 MINNCLTYNNEGDPVADFALQFRKKFAAKWKKEFPE 225
>gi|195397557|ref|XP_002057395.1| GJ16365 [Drosophila virilis]
gi|194147162|gb|EDW62881.1| GJ16365 [Drosophila virilis]
Length = 429
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ I +H ++WPF PVD + L L DY+++I++PMD TIK +++ Y
Sbjct: 39 LQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY---Y 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
+ +E D +F N YN +DV VMA++L + F +K ++ +PK
Sbjct: 96 WSAKEAIHDFNTMFTNCYVYNKPGEDVVVMAQTLEKVFLQK-IESMPK 142
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 98
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E A
Sbjct: 364 YAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAA 412
>gi|223993693|ref|XP_002286530.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977845|gb|EED96171.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 215
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
A PF PVD + LGL DY V++KPMD +K K++ + Y+++ + DVRL++KN
Sbjct: 21 AEPFREPVDYKALGLVDYPLVVKKPMDLGQVKKKLNE---SKYKSIHDAADDVRLIWKNC 77
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
M YN + D +++A+++ +KFEEK+ +L+ + E
Sbjct: 78 MTYNADGSDFYLLAQTMAKKFEEKFAKLVEQFGE 111
>gi|323448923|gb|EGB04816.1| hypothetical protein AURANDRAFT_72433 [Aureococcus anophagefferens]
Length = 1616
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/101 (43%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 41 FITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 100
++ + K A F+ PVD E +G DY ++ PMDF T+K K+D D T V ADV
Sbjct: 643 YLMRTKQAEWFLEPVDPEVMGNDDYPTIVAAPMDFGTVKAKLDAGDYT----VHTFAADV 698
Query: 101 RLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
RLVF+NAM +N E DDVH A L KFE+++ L V +
Sbjct: 699 RLVFRNAMTFNVEGDDVHEAALWLDVKFEKRYADALAGVFD 739
>gi|397579592|gb|EJK51267.1| hypothetical protein THAOC_29580 [Thalassiosira oceanica]
Length = 2323
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM-DGKDGTGYRNVREIYADVRLVFKN 106
A PF PVD + LGL+DY +I PMD T+K ++ +GK Y V ++ DVR ++KN
Sbjct: 31 AAPFRDPVDWKSLGLYDYPRIIRNPMDLGTVKRRLNEGK----YSTVYDVAEDVRRIWKN 86
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN E D + + +S+ EKFEEK+ +L
Sbjct: 87 CCKYNPEDSDFNKLGRSMHEKFEEKYERL 115
>gi|160333520|ref|NP_001103994.1| bromodomain containing 2b [Danio rerio]
gi|157280795|gb|ABV29330.1| truncated bromodomain-containing protein 2b [Danio rerio]
Length = 276
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF + + +H +AWPF PVD L L DY+++I++PMD TIK +++ Y
Sbjct: 75 LQFLHKVLVKALWRHHFAWPFHEPVDATRLNLPDYHKIIKQPMDMGTIKKRLENNY---Y 131
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
R E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 132 RGASECLQDFNTMFTNCYIYNKPADDIVLMAQSLEKVFLQKVAQM 176
>gi|452003453|gb|EMD95910.1| hypothetical protein COCHEDRAFT_1210171 [Cochliobolus
heterostrophus C5]
Length = 912
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 49 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 108
+PF PVD L + Y ++I+KPMDF TI+ + K+G Y++ ++ YAD +LVF+N
Sbjct: 565 YPFTSPVDPVALNIPSYLKIIKKPMDFGTIEKNL--KNGV-YQSAKDFYADAQLVFQNCY 621
Query: 109 KYNDERDDVHVMAKSLLEKFEEKW 132
K+N E D V+ M L E FE W
Sbjct: 622 KFNPEGDAVNQMGHKLEELFESLW 645
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
F PVD L + YY+V++ PMD +T++ K+ K Y+ VR+ AD+ + N+ +
Sbjct: 362 FKDPVDPVALNIPTYYDVVKHPMDLTTMEAKLKEKK---YKYVRDFMADLDQMITNSELF 418
Query: 111 NDERDDVHVMAKSLLEKF 128
N+++ V +L F
Sbjct: 419 NNKQHPVTQAGYNLRAYF 436
>gi|384493749|gb|EIE84240.1| hypothetical protein RO3G_08950 [Rhizopus delemar RA 99-880]
Length = 435
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 28 ASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 87
S+++ F + + +T WPF PVD G DYY++I++PMD +TI+ K
Sbjct: 159 GSVIKEFKKPKHAHLT-----WPFERPVDAAAWGAADYYDIIKQPMDMATIEEKW---KQ 210
Query: 88 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
+ Y N E Y D +L+F+N KYN +VH++ K F++ W
Sbjct: 211 SKYANEDEFYNDYKLIFENCYKYNPPHHEVHLLGKKFEAAFDKYW 255
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+A PF+ PVD + DY+++I+ PMD STI+ K+D Y + E ADV L+ N
Sbjct: 50 FATPFLQPVDPVYFNIPDYFDIIKHPMDLSTIQKKLD-----DYHSKEEFIADVELMLNN 104
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEE 148
YN+ D V A+ + F+++ ++L E+K EE
Sbjct: 105 CYLYNNPTDPVCDTAREFEKMFKKQLIKLRATPPAEKKTPEE 146
>gi|402218827|gb|EJT98902.1| Bromodomain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 824
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 8/110 (7%)
Query: 28 ASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 87
AS+LQ ++ + + A+PF PVD L + DY ++I+KPMD ST+K K++ K
Sbjct: 446 ASVLQHLFKK-----SYYSAAYPFYDPVDYVALNIPDYPKIIKKPMDLSTMKKKLESKT- 499
Query: 88 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
Y N +E +AD +L+ KN YN + V + L F+EKW L P
Sbjct: 500 --YENAQEFHADFKLMIKNCRLYNPAQSPVREAGEELNRIFDEKWKGLPP 547
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 16/106 (15%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM--------DGKDGTG--------YR 91
A PF+ PVD GL + Y+ VI+ PMD T++ K+ + G+ Y
Sbjct: 235 AAPFLKPVDTVGLNIPHYHNVIKHPMDLGTVEEKLALSNPAVKSKQSGSATESDPSKRYW 294
Query: 92 NVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
E ADVRL+ NA+K+N E V MAK LLE F+++ ++ P
Sbjct: 295 TADEFVADVRLIVDNAIKFNGEAHVVSQMAKRLLEIFDKQAERMPP 340
>gi|451856062|gb|EMD69353.1| hypothetical protein COCSADRAFT_166346 [Cochliobolus sativus
ND90Pr]
Length = 912
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 49 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 108
+PF PVD L + Y ++I+KPMDF TI+ + K+G Y++ ++ YAD +LVF+N
Sbjct: 565 YPFTSPVDPVALNIPSYLKIIKKPMDFGTIEKNL--KNGV-YQSAKDFYADAQLVFQNCY 621
Query: 109 KYNDERDDVHVMAKSLLEKFEEKW 132
K+N E D V+ M L E FE W
Sbjct: 622 KFNPEGDAVNQMGHKLEELFESLW 645
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
F PVD L + YY+V++ PMD +T++ K+ K Y+ VR+ AD+ + N+ +
Sbjct: 362 FKDPVDPVALNIPTYYDVVKHPMDLTTMEAKLKEKK---YKYVRDFMADLDQMITNSELF 418
Query: 111 NDERDDVHVMAKSLLEKF 128
N+++ V +L F
Sbjct: 419 NNKQHPVTQAGYNLRAYF 436
>gi|431892496|gb|ELK02931.1| Bromodomain-containing protein 4 [Pteropus alecto]
Length = 1345
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Query: 67 EVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLE 126
++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N KYN +V MA+ L +
Sbjct: 392 DIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448
Query: 127 KFEEKWLQL 135
FE ++ ++
Sbjct: 449 VFEMRFAKM 457
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|259090118|pdb|2WP2|A Chain A, Structure Of Brdt Bromodomain Bd1 Bound To A Diacetylated
Histone H4 Peptide.
gi|259090119|pdb|2WP2|B Chain B, Structure Of Brdt Bromodomain Bd1 Bound To A Diacetylated
Histone H4 Peptide
Length = 120
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF R + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 15 LQFLQRVVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENK---YY 71
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ VMA++L + F +K Q+
Sbjct: 72 EKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALEKLFMQKLSQM 116
>gi|218188757|gb|EEC71184.1| hypothetical protein OsI_03067 [Oryza sativa Indica Group]
Length = 264
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 22 GCKNLSASLLQFFVRQARSF--ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 79
G + A L +R + + +H+ W F PVD L L DYY I PMD T++
Sbjct: 41 GVAGVPADLGDALLRCGKLLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVR 100
Query: 80 NKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV 139
+++ + Y + ADVRL F NAM YN D V+ A L E FE W P V
Sbjct: 101 RRLERR---CYADPWAFAADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGW----PSV 153
Query: 140 MEEEKRQEEEEAKAQLDMQLTQEAV 164
+ R + E K +L L + V
Sbjct: 154 LAAPPRPPDAERKRRLSGLLPRLPV 178
>gi|358055176|dbj|GAA98945.1| hypothetical protein E5Q_05633 [Mixia osmundae IAM 14324]
Length = 754
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 108/259 (41%), Gaps = 59/259 (22%)
Query: 42 ITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN-VREIY 97
+ +H+++ +PF+ PVD + L + DY V++ PMD T+K ++D GY N E
Sbjct: 449 VQKHRYSEFTYPFLAPVDWQALNIPDYPNVVQHPMDLGTMKRRLDA----GYYNHASEFE 504
Query: 98 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDM 157
AD RLV +N K+N VH M + L FE +W + R E EE +
Sbjct: 505 ADFRLVIENCYKFNPVETPVHQMGRKLEAFFENRWRD------KPASRPETEEPDSDY-- 556
Query: 158 QLTQEAVQTNKAKELRSELNEVDMQ--LENLRETVIQKCRK------------------- 196
E+ ++K L E D+Q L L+E +K +
Sbjct: 557 ----ESDPEKRSKILAIERQIADLQNTLAELKEPAKKKAKSSRPSYGSTKKSKSYSKSGK 612
Query: 197 -----------------MSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHAT-AQEV 238
++ E K+ L +T L +A++I+ P ++E+
Sbjct: 613 PKTGQKGKASDGDDDGGITFEMKRELANKITTFEGAKLEQAIDIIRSAEPHLLGDESKEI 672
Query: 239 DLDMDAQSELTLWRLKVFV 257
+LD+DA TL +L FV
Sbjct: 673 ELDIDALDPQTLLKLYQFV 691
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
F +PVD LG+ Y+ I PMD ST++ + + Y +V E ++V+LVF N +
Sbjct: 243 FCNPVDPIVLGIPAYFAYIRNPMDLSTVEKHLIANE---YASVEEFRSEVKLVFDNCCAF 299
Query: 111 NDERDDVHVMAKSLLEKFEEKWLQLLPKV 139
N E + +MA+ L F + L+ P +
Sbjct: 300 NREESPIGLMARRLEGAFNKTMLKCPPAL 328
>gi|134117033|ref|XP_772743.1| hypothetical protein CNBK1170 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255361|gb|EAL18096.1| hypothetical protein CNBK1170 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 765
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 10/181 (5%)
Query: 31 LQFFVRQARSFITQHKW---AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 87
LQ+ R +S +K+ PF++PVD + DY VI++P+DF+ IKNK+ +
Sbjct: 402 LQWASRAIKSLEISNKYYVAVSPFLYPVDKIIEEVPDYATVIKRPIDFNIIKNKL--AEN 459
Query: 88 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQE 147
T Y +V ++ D+RL+ NA K+N +VH A LL+ +EEKW + +P +E E
Sbjct: 460 T-YEDVNQVDDDIRLMVANAQKFNPPGHEVHTSATQLLQIWEEKW-RTVPAKVETRDSSE 517
Query: 148 EEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGT 207
+ A+A D ++ Q + L S++ ++ Q+ LR + ++ ++ K T
Sbjct: 518 DPMAEAFDDYSSDEDNAQL---RSLESQVIALNQQISALRSKMTKRRAARGSKSKSKPKT 574
Query: 208 A 208
A
Sbjct: 575 A 575
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 17/126 (13%)
Query: 21 GGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKN 80
G L+ + ++ + RS + A+ F+ PVD + Y+ VI+ PMD T++
Sbjct: 202 GPNTPLTLTQHKYMLNAVRSLKKRLPDAYNFLVPVDTVRFNIPHYHTVIDTPMDLGTVET 261
Query: 81 KMDGKDGTG-----------------YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKS 123
K+ D G Y NV E+ DVR +++N+ K+N + V MA
Sbjct: 262 KLIVSDPRGPPKDKSKMSKWDTSKGKYNNVAEVTEDVRRIWENSRKFNGKEHPVSQMATR 321
Query: 124 LLEKFE 129
L E FE
Sbjct: 322 LEEAFE 327
>gi|58260602|ref|XP_567711.1| nucleus protein [Cryptococcus neoformans var. neoformans JEC21]
gi|57229792|gb|AAW46194.1| nucleus protein, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 1275
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 31 LQFFVRQARSFITQHKW---AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 87
LQ+ R +S +K+ PF++PVD + DY VI++P+DF+ IKNK+
Sbjct: 912 LQWASRAIKSLEISNKYYVAVSPFLYPVDKIIEEVPDYATVIKRPIDFNIIKNKLAENT- 970
Query: 88 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQE 147
Y +V ++ D+RL+ NA K+N +VH A LL+ +EEKW + +P +E E
Sbjct: 971 --YEDVNQVDDDIRLMVANAQKFNPPGHEVHTSATQLLQIWEEKW-RTVPAKVETRDSSE 1027
Query: 148 EEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGT 207
+ A+A D ++ Q + L S++ ++ Q+ LR + ++ ++ K T
Sbjct: 1028 DPMAEAFDDYSSDEDNAQL---RSLESQVIALNQQISALRSKMTKRRAARGSKSKSKPKT 1084
Query: 208 A 208
A
Sbjct: 1085 A 1085
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 31/119 (26%)
Query: 42 ITQHKW--------------AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 87
+TQHK+ A+ F+ PVD + Y+ VI+ PMD T++ K+ D
Sbjct: 719 LTQHKYMLNAVRSLKKRLPDAYNFLVPVDTVRFNIPHYHTVIDTPMDLGTVETKLIVSDP 778
Query: 88 TG-----------------YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 129
G Y NV E+ DVR +++N+ K+N + V MA L E FE
Sbjct: 779 RGPPKDKSKMSKWDTSKGKYNNVAEVTEDVRRIWENSRKFNGKEHPVSQMATRLEEAFE 837
>gi|119194171|ref|XP_001247689.1| hypothetical protein CIMG_01460 [Coccidioides immitis RS]
gi|392863070|gb|EAS36227.2| transcription regulator BDF1 [Coccidioides immitis RS]
Length = 806
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRL 102
+ +A PF PVD L + Y+ +I+KPMD STI+ K+ TG Y N +E+ DVRL
Sbjct: 471 HYNFAAPFYQPVDPVALNIPTYHNIIKKPMDLSTIRTKLQ----TGQYENSKEMENDVRL 526
Query: 103 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
+FKN K+N D + K L E F+ KW Q
Sbjct: 527 MFKNCYKFNIPGDPTYNAGKKLEEIFDYKWGQ 558
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 32 QFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYR 91
+FF+R + H + F PVD L + +Y +I++PMD T+++K+ K G Y+
Sbjct: 259 KFFIRTLAALKRTHDARF-FRVPVDPVKLNIPNYPTIIKEPMDLHTMEDKI--KSG-AYK 314
Query: 92 NVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
V +I AD +L+ N + +N V V L + + E+ L LP E E
Sbjct: 315 TVDQITADFKLMIDNCITFNGPEHVVTVEGMRLRDNW-ERHLTKLPSPSEVE 365
>gi|303311489|ref|XP_003065756.1| Bromodomain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240105418|gb|EER23611.1| Bromodomain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320039630|gb|EFW21564.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 806
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRL 102
+ +A PF PVD L + Y+ +I+KPMD STI+ K+ TG Y N +E+ DVRL
Sbjct: 471 HYNFAAPFYQPVDPVALNIPTYHNIIKKPMDLSTIRTKLQ----TGQYENSKEMENDVRL 526
Query: 103 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
+FKN K+N D + K L E F+ KW Q
Sbjct: 527 MFKNCYKFNIPGDPTYNAGKKLEEIFDYKWGQ 558
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 32 QFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYR 91
+FF+R + H + F PVD L + +Y +I++PMD T+++K+ K G Y+
Sbjct: 259 KFFIRTLAALKRTHDARF-FRVPVDPVKLNIPNYPTIIKEPMDLHTMEDKI--KSG-AYK 314
Query: 92 NVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
V +I AD +L+ N + +N V V L + + E+ L LP E E
Sbjct: 315 MVDQITADFKLMIDNCITFNGPEHVVTVEGMRLRDNW-ERHLTKLPSPSEVE 365
>gi|18395937|ref|NP_566151.1| bromodomain and extraterminal domain protein 10 [Arabidopsis
thaliana]
gi|75163747|sp|Q93ZB7.1|GTE11_ARATH RecName: Full=Transcription factor GTE11; AltName: Full=BROMODOMAIN
AND EXTRATERMINAL DOMAIN PROTEIN 10; Short=AtBET10;
AltName: Full=Bromodomain-containing protein GTE11;
AltName: Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP
E11
gi|16323117|gb|AAL15293.1| AT3g01770/F28J7_10 [Arabidopsis thaliana]
gi|20466526|gb|AAM20580.1| unknown protein [Arabidopsis thaliana]
gi|22136456|gb|AAM91306.1| unknown protein [Arabidopsis thaliana]
gi|332640191|gb|AEE73712.1| bromodomain and extraterminal domain protein 10 [Arabidopsis
thaliana]
Length = 620
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
QH W F PVDV L + DY+ +I+ PMD T+K+K+ GT Y + E ADVRL
Sbjct: 144 QH--CWLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKL--TSGT-YSSPSEFSADVRLT 198
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
F+NAM YN ++V+ A +L + FE +W
Sbjct: 199 FRNAMTYNPSDNNVYRFADTLSKFFEVRW 227
>gi|195426878|ref|XP_002061517.1| GK20671 [Drosophila willistoni]
gi|194157602|gb|EDW72503.1| GK20671 [Drosophila willistoni]
Length = 623
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 84/173 (48%), Gaps = 26/173 (15%)
Query: 8 SSKMHFIGKKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYE 67
++K+H+ K LL+ CK K+A FM PVD E L + YY
Sbjct: 33 TNKLHYFKKHLLDEVCKK--------------------KFALDFMEPVDTEVLQVPTYYT 72
Query: 68 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 127
+IE+PMD TI ++ Y +V E AD RLV +N +N D VH K +LEK
Sbjct: 73 IIERPMDLGTITKRV---QNNYYNSVDEAVADFRLVLRNCFTFNRPGDVVHRKGK-MLEK 128
Query: 128 FEEKWLQLLPKVMEEE-KRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEV 179
F K ++ LPK E K+ + +KA+L+ T A N ++ R +L ++
Sbjct: 129 FFYKKIKSLPKGAEILCKKDPKAVSKAKLNGPKTM-ATLANTERQCREQLKKL 180
>gi|358055177|dbj|GAA98946.1| hypothetical protein E5Q_05634 [Mixia osmundae IAM 14324]
Length = 750
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 108/259 (41%), Gaps = 59/259 (22%)
Query: 42 ITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN-VREIY 97
+ +H+++ +PF+ PVD + L + DY V++ PMD T+K ++D GY N E
Sbjct: 445 VQKHRYSEFTYPFLAPVDWQALNIPDYPNVVQHPMDLGTMKRRLDA----GYYNHASEFE 500
Query: 98 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDM 157
AD RLV +N K+N VH M + L FE +W + R E EE +
Sbjct: 501 ADFRLVIENCYKFNPVETPVHQMGRKLEAFFENRWRD------KPASRPETEEPDSDY-- 552
Query: 158 QLTQEAVQTNKAKELRSELNEVDMQ--LENLRETVIQKCRK------------------- 196
E+ ++K L E D+Q L L+E +K +
Sbjct: 553 ----ESDPEKRSKILAIERQIADLQNTLAELKEPAKKKAKSSRPSYGSTKKSKSYSKSGK 608
Query: 197 -----------------MSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHAT-AQEV 238
++ E K+ L +T L +A++I+ P ++E+
Sbjct: 609 PKTGQKGKASDGDDDGGITFEMKRELANKITTFEGAKLEQAIDIIRSAEPHLLGDESKEI 668
Query: 239 DLDMDAQSELTLWRLKVFV 257
+LD+DA TL +L FV
Sbjct: 669 ELDIDALDPQTLLKLYQFV 687
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
F +PVD LG+ Y+ I PMD ST++ + + Y +V E ++V+LVF N +
Sbjct: 239 FCNPVDPIVLGIPAYFAYIRNPMDLSTVEKHLIANE---YASVEEFRSEVKLVFDNCCAF 295
Query: 111 NDERDDVHVMAKSLLEKFEEKWLQLLPKV 139
N E + +MA+ L F + L+ P +
Sbjct: 296 NREESPIGLMARRLEGAFNKTMLKCPPAL 324
>gi|255580043|ref|XP_002530855.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223529579|gb|EEF31529.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 536
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H W F PVD + L + DY+ +I PMD T+K+K++ Y E ADVR
Sbjct: 93 LMDHPCGWVFKEPVDPDKLHIPDYFSIITNPMDLGTVKSKLENNQ---YFESEEFAADVR 149
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
L F NA+ YN + VH MA+ L + FE +W L
Sbjct: 150 LTFSNALLYNTPPNYVHNMAEKLKKIFETRWKAL 183
>gi|6016737|gb|AAF01563.1|AC009325_33 hypothetical protein [Arabidopsis thaliana]
gi|6091741|gb|AAF03453.1|AC010797_29 hypothetical protein [Arabidopsis thaliana]
Length = 601
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
QH W F PVDV L + DY+ +I+ PMD T+K+K+ GT Y + E ADVRL
Sbjct: 144 QH--CWLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKL--TSGT-YSSPSEFSADVRLT 198
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
F+NAM YN ++V+ A +L + FE +W
Sbjct: 199 FRNAMTYNPSDNNVYRFADTLSKFFEVRW 227
>gi|189198604|ref|XP_001935639.1| bromodomain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187982738|gb|EDU48226.1| bromodomain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 851
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 61/104 (58%), Gaps = 8/104 (7%)
Query: 29 SLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGT 88
S+L ++ S +T +PF+ PVD L + Y ++I+KPMDF TI+ + K+G
Sbjct: 493 SVLTELMKPKYSAVT-----YPFITPVDPVALNIPSYLKIIKKPMDFGTIEKNL--KNGV 545
Query: 89 GYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
Y++ ++ YAD +LVF+N K+N E D V+ M L + FE W
Sbjct: 546 -YQSAKDFYADAQLVFQNCYKFNPEGDAVNQMGHKLEDLFESLW 588
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
F PVD LG+ Y E+++ PMD ST+++K+ K Y VR+ AD+ + N+ +
Sbjct: 304 FKDPVDPVALGIPQYPEIVKHPMDLSTMESKLKEKK---YTYVRDFMADLDQMITNSELF 360
Query: 111 NDERDDVHVMAKSLLEKF 128
N+++ V +L F
Sbjct: 361 NNKQHPVTQAGYNLRAYF 378
>gi|47210344|emb|CAF96012.1| unnamed protein product [Tetraodon nigroviridis]
Length = 261
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+ +AWPF PVDV LGLHDY+++I++PMD STI+ KMD + E ADV+L+
Sbjct: 183 HYAYAWPFYVPVDVVALGLHDYHDIIKQPMDLSTIRKKMDQGEYA---EAAEFAADVQLM 239
Query: 104 FKNAMKYNDERDDVHVMAKSL 124
F N KYN +V MA+ L
Sbjct: 240 FSNCYKYNPPSHEVVHMARKL 260
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 17/164 (10%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
L + R + +H ++WPF PVD LGL DYY VI PMD STI ++ K Y
Sbjct: 24 LSYLERVVIKALWRHPFSWPFQQPVDAVALGLLDYYTVITNPMDLSTITKRLKNK---YY 80
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 150
E D+ +F N YN+ + KSL K L P + + +
Sbjct: 81 WQASECIQDLNTMFSNCYAYNE-------IKKSLKRKLASSPLTPSPVASSQVSPRGDRV 133
Query: 151 AKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKC 194
A L + +++ + ++ + + + +R + KC
Sbjct: 134 TPATL-------SCRSSSGRSIKPPRKDFPFEHKKVRLSAPLKC 170
>gi|213405871|ref|XP_002173707.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212001754|gb|EEB07414.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 596
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+A+PF PVD DY+++I+ PMD ST++ K++ + Y + AD+RL+F N
Sbjct: 246 FAYPFYQPVDPVACDCPDYFDIIKHPMDLSTVQKKLNNGE---YETPSDFEADIRLIFNN 302
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
YN VH M + L F+EKWL
Sbjct: 303 CYTYNPVGTPVHEMGRKLEAVFDEKWLH 330
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K + PF PVD + DY +I+ PMD TI+ ++ G Y + +E D+RL+F
Sbjct: 80 KDSIPFRAPVDPVKQNIPDYPTIIKHPMDLGTIEKRLTGH---IYNSAQEFIDDMRLMFS 136
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
N YN V VM K++ FE + QL
Sbjct: 137 NCFTYNGTTSPVGVMGKNIETIFERQLKQL 166
>gi|330913598|ref|XP_003296313.1| hypothetical protein PTT_05982 [Pyrenophora teres f. teres 0-1]
gi|311331637|gb|EFQ95588.1| hypothetical protein PTT_05982 [Pyrenophora teres f. teres 0-1]
Length = 909
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Query: 49 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 108
+PF+ PVD L + Y ++I+KPMDF TI+ + K+G Y++ ++ YAD +LVF+N
Sbjct: 566 YPFITPVDPVALNIPSYLKIIKKPMDFGTIEKNL--KNGV-YQSAKDFYADAQLVFQNCY 622
Query: 109 KYNDERDDVHVMAKSLLEKFEEKW 132
K+N E D V+ M L + FE W
Sbjct: 623 KFNPEGDAVNQMGHKLEDLFESLW 646
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
F PVD LG+ +Y E+++ PMD ST+++K+ K Y VR+ AD+ + N+ +
Sbjct: 363 FKDPVDPHALGIPNYPEIVKHPMDLSTMESKLKEKK---YNYVRDFMADLDQMITNSELF 419
Query: 111 NDERDDVHVMAKSLLEKF 128
N+++ V +L F
Sbjct: 420 NNKQHPVTQAGYNLRAYF 437
>gi|357144539|ref|XP_003573328.1| PREDICTED: transcription factor GTE10-like [Brachypodium
distachyon]
Length = 777
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +H++ F PVD L + DY+++++ PMD TI+ K++ Y E ADVR
Sbjct: 167 LMRHRYGQTFSIPVDPVKLNIPDYFDIVKHPMDLGTIQKKLNS---GSYPTPWEFAADVR 223
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL---LPKVMEE 142
L F NA+ YN + VH MAK++ FE +W + LP+ EE
Sbjct: 224 LTFSNAILYNPHNNVVHQMAKTMSSHFEPRWKPIEKKLPRPEEE 267
>gi|256079712|ref|XP_002576129.1| bromodomain-containing protein 3 brd3 [Schistosoma mansoni]
gi|353230012|emb|CCD76183.1| putative bromodomain-containing protein 3, brd3 [Schistosoma
mansoni]
Length = 692
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 79/155 (50%), Gaps = 17/155 (10%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD-GKDGTGYRNVREIYADVRLVFKNAMK 109
F+ PVDV LGLHDYY+V++K MD STIK K++ G+ T Y + DVRL+F N K
Sbjct: 282 FLKPVDVVALGLHDYYDVVKKAMDLSTIKTKLESGQYHTKY----DFADDVRLMFNNCYK 337
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLD---MQLTQEAVQ- 165
YN E +V + K L F+E + KV ++E +D QL Q A++
Sbjct: 338 YNGEDSEVARVGKQLQAIFDENFA----KVPDDESDPAASPDGRPVDQNMYQLIQNAIKE 393
Query: 166 ----TNKAKELRSELNEVDMQLENLRETVIQKCRK 196
TN+ + +L + L ++ ++ RK
Sbjct: 394 HQKLTNQFQRFSEDLQKSTANLNSILSSLSMAVRK 428
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 12/173 (6%)
Query: 26 LSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 85
++ + L++ ++ + + K WPF PVD + L L DY ++I+ PMD TIK +++ K
Sbjct: 33 ITTNQLEYIKKEVVGRLFKEKIVWPFTKPVDHQRLNLPDYPKIIKHPMDLGTIKQRLNLK 92
Query: 86 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 145
Y + E D+ +F+N +N DDV MA LE+ + L+ +P E
Sbjct: 93 ---FYHSSSECLDDLFTMFRNCYIFNKPGDDVVAMAMK-LEQIARERLKFMPTPETEICP 148
Query: 146 QEEEEA--------KAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 190
Q+ ++ + ++ A TN + L VD R +V
Sbjct: 149 QKTPKSIRPIGAPLQVHPPIEPIHTAASTNHTEGLNGSAVSVDQTTLPFRPSV 201
>gi|50413693|ref|XP_457302.1| DEHA2B07964p [Debaryomyces hansenii CBS767]
gi|49652967|emb|CAG85306.1| DEHA2B07964p [Debaryomyces hansenii CBS767]
Length = 639
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Query: 28 ASLLQFFVRQARSFITQ--HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 85
A+ L+F + + I++ + + +PF+ PVD L + +Y EV+++PMD TI+ K+
Sbjct: 311 AAELRFCNQTVKELISKKHYNYNFPFLAPVDTVALNIPNYAEVVKEPMDLGTIQTKLAN- 369
Query: 86 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 133
Y N E DVRLVFKN +N E DV++M L F++KW+
Sbjct: 370 --NQYENGDEFERDVRLVFKNCYAFNPEGTDVNMMGHRLESIFDKKWV 415
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
A PF+HPVD+ L + YY I +PMD STI+ K+ + Y I D L+ N
Sbjct: 166 AGPFVHPVDIVKLNIPFYYNYIPRPMDLSTIERKI---NANAYEEPSRIVEDFNLMVANC 222
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 140
K+N E+ + MAK++ FE+ L + PKV+
Sbjct: 223 CKFNGEQSGISKMAKNVQAHFEKHMLNMPPKVL 255
>gi|209882027|ref|XP_002142451.1| SNF2/RAD54 helicase family protein [Cryptosporidium muris RN66]
gi|209558057|gb|EEA08102.1| SNF2/RAD54 helicase family protein [Cryptosporidium muris RN66]
Length = 1877
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 6/112 (5%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K+ PF+ PVD G DYY VI +PMDF+T++ K+ + Y +E ++DV+ +F
Sbjct: 168 KYGIPFLRPVDPNMDGASDYYAVIMRPMDFTTVQTKLYLRI---YSQPQEFWSDVQQIFT 224
Query: 106 NAMKYNDERDDVHV---MAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQ 154
N +YN D+HV + K+L +K +W L + E+ +Q+ EE+ ++
Sbjct: 225 NCFQYNSVDSDIHVQGRLMKALFDKLYGEWALLSRQTQEDLVKQKSEESPSE 276
>gi|268564300|ref|XP_002639068.1| C. briggsae CBR-TAG-332 protein [Caenorhabditis briggsae]
Length = 747
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 30 LLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 89
L +F+ ++ + F AW F PVD +GLHDY+ +I+ PMD TIK K++
Sbjct: 260 LAEFYNKKYQEF------AWVFYEPVDAATMGLHDYHNIIKHPMDMKTIKKKLEAGQ--- 310
Query: 90 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
Y+ E +D+RL+ N + YN D V+ E F +KW +L+
Sbjct: 311 YKEPAEFESDIRLMINNCLTYNPVGDPVNSFGLRFQEVFNKKWSELV 357
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 11/106 (10%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+HK WPF PVD L + Y+E I +PMD TI++++ Y + +E D+ V
Sbjct: 57 KHKHVWPFQKPVDAHTLCIPLYHERITRPMDLKTIESRL---KSVYYTSAQECIDDIEQV 113
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 149
F+N +N + DDV +MA+++ E ++ K +E+ R E E
Sbjct: 114 FQNCYMFNGKEDDVTIMAQNVHE--------VIKKSLEQAPRDEHE 151
>gi|258567404|ref|XP_002584446.1| predicted protein [Uncinocarpus reesii 1704]
gi|237905892|gb|EEP80293.1| predicted protein [Uncinocarpus reesii 1704]
Length = 807
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKN 106
A PF PVD L + Y+ +I+KPMD STI+ K+ TG Y N +E+ DVRL+F+N
Sbjct: 477 ASPFYQPVDPVALNIPTYHNIIKKPMDLSTIRTKLQ----TGQYENSKEMENDVRLMFRN 532
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
K+N D + K L E F+ KW Q
Sbjct: 533 CYKFNIPGDPTYNAGKKLEEIFDSKWAQ 560
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 32 QFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYR 91
+FF R + H + F PVD L + +Y +I+ PMD T++ K+ K G Y+
Sbjct: 261 KFFTRTLAALKRTHDARF-FRTPVDPVKLNIPNYPLIIKHPMDMHTMEEKV--KHG-AYK 316
Query: 92 NVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV 139
E+ AD L+ N + +N HV+ L + +E W + L K+
Sbjct: 317 TADEVIADFNLIVDNCVTFNGPE---HVVTIECL-RLKENWERHLAKL 360
>gi|50553560|ref|XP_504191.1| YALI0E20537p [Yarrowia lipolytica]
gi|49650060|emb|CAG79786.1| YALI0E20537p [Yarrowia lipolytica CLIB122]
Length = 653
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 37/243 (15%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+++PF+ PVD L Y+++I++PMD ST++ KM + Y E +DVRL+FKN
Sbjct: 329 YSFPFLLPVDPVALNCPSYFKIIKEPMDLSTVQEKM---NNNAYETADEFESDVRLIFKN 385
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQ------LLPKVMEEEKRQEEEEAKAQLDMQLT 160
++N + V+ M K L F++KW + P M++ +E + L +T
Sbjct: 386 CYRFNPDGTPVNKMGKRLEAIFDKKWAEKPIPPPSPPPTMDDSSDYDEYSSDEDLASSIT 445
Query: 161 QEAVQ--TNKAKELRSELNEVDMQLENLRETVIQKCRK---------------------- 196
A+ + + ++ EL + M+ + RE + R
Sbjct: 446 NPAIAFLEEQIERMKQELTK--MKKDAAREMKRSRRRGSSKRSKSSSKRKGSRSSDSGGV 503
Query: 197 -MSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLK 254
+S E KK L + +L + L + ++ E+ P + Q E++LDMD TL +L
Sbjct: 504 VVSYEMKKELSERIPQLKEKQLQHVINLIHESMPQLKSEGQDEIELDMDQLDPHTLMKLY 563
Query: 255 VFV 257
+V
Sbjct: 564 NYV 566
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A PF+HPVD L + Y+EVI+ PMD T++ K++ + Y ++ ADV+ +
Sbjct: 140 KDAAPFIHPVDPVKLNIPTYFEVIKHPMDLGTMEKKLNNGE---YGTKEDMIADVQRIVD 196
Query: 106 NAMKYNDERDDVHVMAKSLLEKFE 129
N + +N + MAKSL FE
Sbjct: 197 NCLTFNGADSFISSMAKSLFTSFE 220
>gi|401882488|gb|EJT46746.1| hypothetical protein A1Q1_04711 [Trichosporon asahii var. asahii
CBS 2479]
gi|406701252|gb|EKD04402.1| hypothetical protein A1Q2_01286 [Trichosporon asahii var. asahii
CBS 8904]
Length = 744
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 10/170 (5%)
Query: 31 LQFFVRQARSFITQHKW---AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 87
LQ+ + +SF K+ A PF++PV + Y VI+KP+D IK +++
Sbjct: 395 LQWAAKTIQSFEKTQKYFEIASPFLYPVSEIIAAIPSYTSVIKKPIDLLQIKQRLED--- 451
Query: 88 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQE 147
Y +V++I D RL+ NA ++N D VH A +LL+ +EEKW L PK +E + Q
Sbjct: 452 NVYEDVQQINNDFRLMISNARQFNPPGDAVHNAASALLQVWEEKWRSLPPK--QEIREQS 509
Query: 148 EEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKM 197
E+ A+ D + + V + KE ++E +D ++ +L + +K K+
Sbjct: 510 EDIAEEFDDSEDEDKDVV--RLKEAKAERAALDREIADLEAKIARKPAKV 557
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 18/104 (17%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-----------------YRNV 93
F PVD + Y++VI PMD T++ K+ D G Y +V
Sbjct: 227 FREPVDTVRFNIPHYHQVIAYPMDLGTVETKLVASDPRGPPKDKAKAARWDTSKGTYNSV 286
Query: 94 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
E+ DVR +++N K+N RD V A S L+ E+ L+ LP
Sbjct: 287 AEVTKDVRQIWENTRKFNG-RDHVVSQAASKLQDQYERALRTLP 329
>gi|401842077|gb|EJT44353.1| BDF2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 634
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 5/87 (5%)
Query: 49 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK-MDGKDGTGYRNVREIYADVRLVFKNA 107
+PF+ PVD L L +Y+E+I+ PMD TI N M+ K Y+ V + DV LVF N
Sbjct: 340 FPFLQPVDPIALNLPNYFEIIKNPMDLGTISNNLMNWK----YKTVDQFINDVNLVFLNC 395
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQ 134
++N E ++VH+M K L E F WL+
Sbjct: 396 FQFNPEGNEVHLMGKKLKELFSVHWLE 422
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A PF++PVD L + Y+ ++ PMD S I K+ + Y +V ++ +D R +
Sbjct: 150 KDAKPFLNPVDPIALNIPHYFNYVQTPMDLSLIGKKL---QESTYHSVEQVKSDFRTMVN 206
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 140
N + +N V +MAK + FE K + P+V+
Sbjct: 207 NCLSFNGLESSVSLMAKRIQIYFERKLSAMPPRVL 241
>gi|348516624|ref|XP_003445838.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Oreochromis niloticus]
Length = 2378
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 59/95 (62%), Gaps = 5/95 (5%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y+N+ DV
Sbjct: 2285 LERHQDAWPFLTPVNLKSV--PGYRKVIKKPMDFSTIREKLVSSQ---YQNLETFIIDVN 2339
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
LVF N K+N++ D+ ++ + FE++W +LL
Sbjct: 2340 LVFDNCEKFNEDNSDIGRAGHNMRKFFEKRWTELL 2374
>gi|219118718|ref|XP_002180126.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408383|gb|EEC48317.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1056
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 5/109 (4%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H+ W F PVD LGL DY+E+I+KPMD TI+ ++ + + Y ++ + D+
Sbjct: 186 LMAHQHGWVFNGPVDPVELGLVDYFEIIKKPMDLGTIQKRL---ESSAYHSIDDFKTDIF 242
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE--EKRQEE 148
L F+NAM YN++ V+ MAK L K E +L+ ++ E E+RQ E
Sbjct: 243 LTFENAMVYNEDGSVVYDMAKQLKVKAESDMKRLVAQLETEDLERRQNE 291
>gi|345489407|ref|XP_001604290.2| PREDICTED: bromodomain adjacent to zinc finger domain protein 1A-like
isoform 1 [Nasonia vitripennis]
Length = 1443
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 13/110 (11%)
Query: 22 GCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 81
GCK+L LL + I ++K +WPFM PV + + DY++ I PMDF TIK K
Sbjct: 1299 GCKHLLTQLL--------AEIKKNKDSWPFMAPVTKDEVP--DYHDYISHPMDFGTIKTK 1348
Query: 82 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
+ + YR ++E Y+D LVF N YN E +V+ L++ FE+K
Sbjct: 1349 FENDE---YRTLQEFYSDCLLVFDNCQTYNTEHSEVYKAGMRLMKFFEKK 1395
>gi|195063016|ref|XP_001996299.1| GH22418 [Drosophila grimshawi]
gi|193899794|gb|EDV98660.1| GH22418 [Drosophila grimshawi]
Length = 309
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
L++ ++ + H +A+PF PV+ + L L DY+++I++PMD +TIK ++ + Y
Sbjct: 29 LEYILKTVMKSLWNHHYAYPFQQPVNAKKLKLPDYHDIIKQPMDLATIKKRL---ANSYY 85
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
+ E AD+ L+F N YN +DV +MAK L E +LQ + + +EE
Sbjct: 86 WSATEAAADINLIFTNCSLYNKPTEDVIIMAKVL----ESVFLQAIKDMPKEE 134
>gi|345489409|ref|XP_003426132.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 1A-like
isoform 2 [Nasonia vitripennis]
Length = 1407
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 13/110 (11%)
Query: 22 GCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 81
GCK+L LL + I ++K +WPFM PV + + DY++ I PMDF TIK K
Sbjct: 1263 GCKHLLTQLL--------AEIKKNKDSWPFMAPVTKDEVP--DYHDYISHPMDFGTIKTK 1312
Query: 82 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
+ + YR ++E Y+D LVF N YN E +V+ L++ FE+K
Sbjct: 1313 FENDE---YRTLQEFYSDCLLVFDNCQTYNTEHSEVYKAGMRLMKFFEKK 1359
>gi|195062991|ref|XP_001996293.1| GH22415 [Drosophila grimshawi]
gi|193899788|gb|EDV98654.1| GH22415 [Drosophila grimshawi]
Length = 309
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
L++ ++ + H +A+PF PV+ + L L DY+++I++PMD +TIK ++ + Y
Sbjct: 29 LEYILKTVMKSLWNHHYAYPFQQPVNAKKLKLPDYHDIIKQPMDLATIKKRL---ANSYY 85
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
+ E AD+ L+F N YN +DV +MAK L E +LQ + + +EE
Sbjct: 86 WSATEAAADINLIFTNCSLYNKPTEDVIIMAKVL----ESVFLQAIKDMPKEE 134
>gi|195063000|ref|XP_001996295.1| GH22416 [Drosophila grimshawi]
gi|193899790|gb|EDV98656.1| GH22416 [Drosophila grimshawi]
Length = 291
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 7/113 (6%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
L++ ++ + H +A+PF PV+ + L L DY+++I++PMD +TIK ++ Y
Sbjct: 29 LEYILKTVMKSLWNHHYAYPFQQPVNAKKLKLPDYHDIIKQPMDLATIKKRLANNY---Y 85
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
+ E AD+ L+F N YN +DV +MAK L E +LQ + + +EE
Sbjct: 86 WSATEAAADINLIFTNCSLYNKPTEDVIIMAKVL----ESVFLQAIKDMPKEE 134
>gi|260943750|ref|XP_002616173.1| hypothetical protein CLUG_03414 [Clavispora lusitaniae ATCC 42720]
gi|238849822|gb|EEQ39286.1| hypothetical protein CLUG_03414 [Clavispora lusitaniae ATCC 42720]
Length = 613
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 49 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 108
+PF+ PVD L + +Y++++++PMD +I+ K+ Y N E DVRLVFKN
Sbjct: 304 FPFLQPVDPVALNIPNYFDIVKEPMDLGSIQTKLAN---NQYENGDEFEKDVRLVFKNCY 360
Query: 109 KYNDERDDVHVMAKSLLEKFEEKW 132
+N E +DVH M + L + F++KW
Sbjct: 361 LFNPEGNDVHSMGQRLEQVFDKKW 384
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 34 FVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 93
FV I + + A PF+HPVDV L + YY I++PMD STI+ K+ + Y +
Sbjct: 122 FVLNTIKAIKRLRDAGPFLHPVDVVKLNVPLYYNYIKRPMDLSTIERKL---NLNAYEDP 178
Query: 94 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 140
++ D L+ N +++N E + MAK++ +FE+ L + PKVM
Sbjct: 179 SQVVDDFNLMVSNCLRFNGENSGISRMAKNIQAQFEKHMLNIPPKVM 225
>gi|297828570|ref|XP_002882167.1| ATBET10 [Arabidopsis lyrata subsp. lyrata]
gi|297328007|gb|EFH58426.1| ATBET10 [Arabidopsis lyrata subsp. lyrata]
Length = 622
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ + W F PVD+ L + DY+ +I+ PMD T+K+K+ GT Y + E ADVR
Sbjct: 137 LMSQQHCWLFNTPVDMVKLNIPDYFTIIKHPMDLGTVKSKL--TSGT-YSSPSEFSADVR 193
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
L F+NAM YN ++V+ A +L + FE +W
Sbjct: 194 LTFRNAMTYNPSDNNVYRFADTLSKFFEVRW 224
>gi|297797327|ref|XP_002866548.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312383|gb|EFH42807.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 486
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
HK W F PVD L + DY+ VI+ PMD TI++++ + Y + + ADVRL F
Sbjct: 184 HKLGWAFRTPVDPVMLNIPDYFTVIKHPMDLGTIRSRLRKGE---YSSPLDFAADVRLTF 240
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQE-A 163
N++ YN + H MA+ + + FE W + K+ + + A L+ ++ E A
Sbjct: 241 SNSIAYNPPGNQFHTMAQGISKYFETGWKSIEKKIPVTKPPVIPLTSSASLESEIPFEVA 300
Query: 164 VQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRL 212
NK+ + +NE +++E + M+ +EKK L L L
Sbjct: 301 PLRNKS----AAMNESKLRVEPAKLV-------MTDDEKKKLSQDLVAL 338
>gi|219118433|ref|XP_002179989.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408246|gb|EEC48180.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1603
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AW F PVD LGL DY+EVI+KPMD TI+ K++ +G Y+ + + V L F
Sbjct: 588 HQHAWVFNTPVDPVELGLPDYFEVIKKPMDLGTIRKKLE--NGV-YQRLDDFKEHVLLTF 644
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
NAM YN E V+ MA + KF+ +++L+ ++ EE
Sbjct: 645 DNAMMYNPEGSVVYNMANEMKVKFQSDFVKLMEQLNAEE 683
>gi|378734234|gb|EHY60693.1| bromodomain-containing protein [Exophiala dermatitidis NIH/UT8656]
Length = 968
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 8/95 (8%)
Query: 42 ITQHKWAWP----FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 97
+T K+ WP F HPVD L + Y+++I+KPMD TI+ K++ Y ++
Sbjct: 619 LTATKY-WPINQYFTHPVDPVALNIPTYFQIIKKPMDLGTIRTKLNNN---VYEKAKDFE 674
Query: 98 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
DVRLVFKN K+N E D V+ L E F +KW
Sbjct: 675 EDVRLVFKNCYKFNPEGDLVNSAGHQLEELFNKKW 709
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
F PVD L + Y+EVI+ PMD TI ++ + Y +V +D L+ N +K+
Sbjct: 425 FRLPVDPVALNIPTYFEVIKHPMDLGTIDQRLKRNE---YTSVAAFISDFELIVDNCVKF 481
Query: 111 NDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLT 160
N V A+ + F + ++ LPK EE ++ ++A +L+ T
Sbjct: 482 NGPDHGVTQAARKMQSSFNSQ-MRNLPKASIEEPPKDNKKAAKKLEPTRT 530
>gi|148922865|ref|NP_001092209.1| uncharacterized protein LOC561095 [Danio rerio]
gi|148744757|gb|AAI42905.1| Zgc:165617 protein [Danio rerio]
Length = 445
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 61/95 (64%), Gaps = 5/95 (5%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +H+ AWPF++PV+++ + Y +VI+KPMDFSTI+ K+ + Y+N+ DV
Sbjct: 352 LERHQDAWPFLNPVNLKSV--PGYRKVIKKPMDFSTIREKLVS---SQYQNLETFIIDVN 406
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
LVF N K+N++ D+ ++ + FE++W +LL
Sbjct: 407 LVFDNCEKFNEDNSDIGRAGHNMRKFFEKRWTELL 441
>gi|194885054|ref|XP_001976378.1| GG20046 [Drosophila erecta]
gi|190659565|gb|EDV56778.1| GG20046 [Drosophila erecta]
Length = 257
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Query: 39 RSFITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREI 96
R F T +K AW F P+D + LGLHDY+E++ +PMD ST++++++ TG Y +
Sbjct: 22 RMFSTTYKNIAWVFYEPLDAQLLGLHDYHEIVREPMDLSTVRHRLN----TGCYLTAADF 77
Query: 97 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQ 146
DVRL+F N Y + + MAK L FEE + Q+ KR+
Sbjct: 78 AKDVRLIFYNTYLYTNPGHLCYHMAKQLQIIFEEMYAQVQLYTCSRTKRR 127
>gi|226485709|emb|CAX75274.1| bromodomain containing 2 [Schistosoma japonicum]
Length = 612
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD-GKDGTGYRNVREIYADVRLVFKNAMK 109
F+ PVDV LGLHDYY+V++K MD STI+ K++ G+ T Y + DVRL+F N K
Sbjct: 203 FLKPVDVVALGLHDYYDVVKKAMDLSTIRTKLESGQYHTKY----DFADDVRLMFNNCYK 258
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQL 135
YN E +V + K L F+E + ++
Sbjct: 259 YNGEDSEVARVGKQLQTIFDENFAKV 284
>gi|384501114|gb|EIE91605.1| hypothetical protein RO3G_16316 [Rhizopus delemar RA 99-880]
Length = 227
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 31/234 (13%)
Query: 43 TQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRL 102
Q ++PF++PVD L + DY +++ P+D STI+ K+ + Y + AD++L
Sbjct: 13 AQKHLSFPFLYPVDPVALNIPDYPSIVKHPIDLSTIETKL---NQNAYDSPHAFAADIKL 69
Query: 103 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQE 162
+F N YN ++ +AK L F+ +W E KA+ + ++
Sbjct: 70 MFNNCYLYNAPELPIYDVAKELEAIFDRQW-----------------EIKAKQPASVPRQ 112
Query: 163 AVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALE 222
+ + R + + E+L S EEKK L + RL+ + L + ++
Sbjct: 113 IKPSKRPAVERKMKSRKKKKRESL-----------SYEEKKELSERINRLTGDRLNEVIQ 161
Query: 223 IVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNN 276
I+ + P E+ LD+DA TL RL FV G N N
Sbjct: 162 IIQSSLPDLDKGETEIVLDIDALDINTLKRLNDFVHNKANTVHSDEGKTLANCN 215
>gi|320170819|gb|EFW47718.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1698
Score = 73.9 bits (180), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+++PF+ PVDVEGLGL DYY+ I PMD ST++ +++ + Y ++ D+RL+F N
Sbjct: 313 FSFPFLEPVDVEGLGLVDYYDTITHPMDLSTLQTQLENGE---YTDLSTAVRDLRLIFAN 369
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
+YN +V MA L + E+K L LLP + E+
Sbjct: 370 CYRYNGSDHEVSRMAHRLEQVLEQK-LALLPLALREK 405
>gi|410912905|ref|XP_003969929.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Takifugu rubripes]
Length = 2168
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 59/95 (62%), Gaps = 5/95 (5%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y+N+ DV
Sbjct: 2075 LERHQDAWPFLTPVNLKSV--PGYRKVIKKPMDFSTIREKLVSSQ---YQNLETFIIDVN 2129
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
LVF N ++N++ D+ ++ + FE++W +LL
Sbjct: 2130 LVFDNCERFNEDNSDIGRAGHNMRKFFEKRWTELL 2164
>gi|323448819|gb|EGB04713.1| hypothetical protein AURANDRAFT_17164, partial [Aureococcus
anophagefferens]
Length = 88
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H+ +W FM PVD L L DY+E+I+ PMD +IK +M + GY+ + E ADVR
Sbjct: 5 LIDHECSWIFMQPVDPVELNLPDYFEIIKNPMDLGSIKKRM---ENNGYKLIAEFGADVR 61
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKF 128
L F NA+ YN DV +A+ + F
Sbjct: 62 LTFDNAISYNGNGSDVCKVARDMKSTF 88
>gi|224013794|ref|XP_002296561.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968913|gb|EED87257.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 89
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
++ H W F PVD LGL DY+EVI+ PMD T+K +++ +G YR++ E+ D+
Sbjct: 6 LSNHNHGWVFNSPVDPVELGLPDYFEVIKNPMDLGTVKKRLE--NGL-YRSINEVEVDIN 62
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKF 128
L F NAM YN E V MAK L +KF
Sbjct: 63 LTFDNAMLYNPEGSVVWSMAKELKDKF 89
>gi|67604075|ref|XP_666591.1| RIKEN cDNA A730019I05 gene [Cryptosporidium hominis TU502]
gi|54657614|gb|EAL36361.1| RIKEN cDNA A730019I05 gene [Cryptosporidium hominis]
Length = 2267
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 66/118 (55%), Gaps = 9/118 (7%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K+ PF+ PVD G DYY VI +PMDF+T++ K+ + Y +E ++DV+ +F
Sbjct: 434 KYGIPFLRPVDPNMDGASDYYSVISRPMDFTTVQTKLYLRI---YSQPQEFWSDVQQIFT 490
Query: 106 NAMKYNDERDDVHV---MAKSLLEKFEEKWLQLLPKVMEEE--KRQEEEEAKAQLDMQ 158
N YN D++V + K+L +K +W LL + +E+ K++ EE K LD Q
Sbjct: 491 NCFHYNSVDSDIYVQGKLLKALFDKLYGEW-ALLSRQTQEDLVKQKSEESPKEWLDDQ 547
>gi|66357154|ref|XP_625755.1| chromodomain-helicase-DNA-binding'multidomain chromatin protein
with the following architecture:
chromo-bromo-chromo-SNF2 ATpase' [Cryptosporidium parvum
Iowa II]
gi|46226948|gb|EAK87914.1| chromodomain-helicase-DNA-binding'multidomain chromatin protein
with the following architecture:
chromo-bromo-chromo-SNF2 ATpase' [Cryptosporidium parvum
Iowa II]
Length = 2270
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 66/118 (55%), Gaps = 9/118 (7%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K+ PF+ PVD G DYY VI +PMDF+T++ K+ + Y +E ++DV+ +F
Sbjct: 434 KYGIPFLRPVDPNMDGASDYYSVISRPMDFTTVQTKLYLRI---YSQPQEFWSDVQQIFT 490
Query: 106 NAMKYNDERDDVHV---MAKSLLEKFEEKWLQLLPKVMEEE--KRQEEEEAKAQLDMQ 158
N YN D++V + K+L +K +W LL + +E+ K++ EE K LD Q
Sbjct: 491 NCFHYNSVDSDIYVQGKLLKALFDKLYGEW-ALLSRQTQEDLVKQKSEESPKEWLDDQ 547
>gi|145353027|ref|XP_001420833.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581068|gb|ABO99126.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 904
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY---RNVREIYADVR 101
HK A+ F+ PVD + DY+EVI+ PMD TIK ++D GY +NV ADVR
Sbjct: 427 HKNAYIFLRPVDPVYWEIPDYFEVIKNPMDLGTIKERIDA----GYYDEKNVEAYAADVR 482
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
LV+ NAM YN + V MA+ + +FE +W
Sbjct: 483 LVWSNAMTYNKDDTPVFKMARIMSREFEYQW 513
>gi|448531883|ref|XP_003870352.1| Bdf1 transcription factor [Candida orthopsilosis Co 90-125]
gi|380354706|emb|CCG24222.1| Bdf1 transcription factor [Candida orthopsilosis]
Length = 730
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+ + +PF+ PVD L L +Y+E++++PMD TI++K+ Y N E D+RL+
Sbjct: 394 HYNYNFPFLAPVDAVALNLPNYHEIVKEPMDLGTIQSKL---TNNLYENADEFEKDIRLM 450
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWL 133
F+N +N E DV++M L F++KW+
Sbjct: 451 FRNCYAFNPEGTDVNMMGHRLEAIFDKKWV 480
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
I + K A PF+ PVD L + YY I +PMD TI+ K+ + Y + ++ D
Sbjct: 216 IKRLKDAVPFLAPVDTVKLNVPFYYNYIPRPMDLLTIERKI---NANAYEEISQVVDDFN 272
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
L+ N K+N E + MA ++ FE+ L + PK
Sbjct: 273 LMVDNCKKFNGEAAGISKMATNIQAHFEKHMLNVPPK 309
>gi|226485707|emb|CAX75273.1| bromodomain containing 2 [Schistosoma japonicum]
Length = 685
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD-GKDGTGYRNVREIYADVRLVFKNAMK 109
F+ PVDV LGLHDYY+V++K MD STI+ K++ G+ T Y + DVRL+F N K
Sbjct: 276 FLKPVDVVALGLHDYYDVVKKAMDLSTIRTKLESGQYHTKY----DFADDVRLMFNNCYK 331
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQL 135
YN E +V + K L F+E + ++
Sbjct: 332 YNGEDSEVARVGKQLQTIFDENFAKV 357
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 10/172 (5%)
Query: 26 LSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 85
++ + L++ ++ + + K WPF PVD + L L DY ++I+ PMD TIK +++ K
Sbjct: 27 ITTNQLEYIKKEVVGRLFKEKIVWPFTKPVDHQRLNLPDYPKIIKHPMDLGTIKQRLNLK 86
Query: 86 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW-------LQLLPK 138
Y + E D+ +F+N +N DDV MA L + E+ +L P+
Sbjct: 87 ---FYHSSSECLDDLFTMFRNCYIFNKPGDDVVAMAMKLEQIARERLKFMPTPETELCPQ 143
Query: 139 VMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 190
+ R + M+ A N + L VD R +V
Sbjct: 144 KTPKSTRPIATPMQIHPPMESIHPAASVNHTEGLNGSAVSVDQTTLPFRPSV 195
>gi|226485705|emb|CAX75272.1| bromodomain containing 2 [Schistosoma japonicum]
Length = 685
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD-GKDGTGYRNVREIYADVRLVFKNAMK 109
F+ PVDV LGLHDYY+V++K MD STI+ K++ G+ T Y + DVRL+F N K
Sbjct: 276 FLKPVDVVALGLHDYYDVVKKAMDLSTIRTKLESGQYHTKY----DFADDVRLMFNNCYK 331
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQL 135
YN E +V + K L F+E + ++
Sbjct: 332 YNGEDSEVARVGKQLQTIFDENFAKV 357
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 10/172 (5%)
Query: 26 LSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 85
++ + L++ ++ + + K WPF PVD + L L DY ++I+ PMD TIK +++ K
Sbjct: 27 ITTNQLEYIKKEVVGRLFKEKIVWPFTKPVDHQRLNLPDYPKIIKHPMDLGTIKQRLNLK 86
Query: 86 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW-------LQLLPK 138
Y + E D+ +F+N +N DDV MA L + E+ +L P+
Sbjct: 87 ---FYHSSSECLDDLFTMFRNCYIFNKPGDDVVAMAMKLEQIARERLKFMPTPETELCPQ 143
Query: 139 VMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 190
+ R + M+ A N + L VD R +V
Sbjct: 144 KTPKSTRPIATPMQIHPPMESIHPAASVNHTEGLNGSAVSVDQTTLPFRPSV 195
>gi|226485711|emb|CAX75275.1| bromodomain containing 2 [Schistosoma japonicum]
Length = 694
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD-GKDGTGYRNVREIYADVRLVFKNAMK 109
F+ PVDV LGLHDYY+V++K MD STI+ K++ G+ T Y + DVRL+F N K
Sbjct: 276 FLKPVDVVALGLHDYYDVVKKAMDLSTIRTKLESGQYHTKY----DFADDVRLMFNNCYK 331
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQL 135
YN E +V + K L F+E + ++
Sbjct: 332 YNGEDSEVARVGKQLQTIFDENFAKV 357
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 10/172 (5%)
Query: 26 LSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 85
++ + L++ ++ + + K WPF PVD + L L DY ++I+ PMD TIK +++ K
Sbjct: 27 ITTNQLEYIKKEVVGRLFKEKIVWPFTKPVDHQRLNLPDYPKIIKHPMDLGTIKQRLNLK 86
Query: 86 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW-------LQLLPK 138
Y + E D+ +F+N +N DDV MA L + E+ +L P+
Sbjct: 87 ---FYHSSSECLDDLFTMFRNCYIFNKPGDDVVAMAMKLEQIARERLKFMPTPETELCPQ 143
Query: 139 VMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 190
+ R + M+ A N + L VD R +V
Sbjct: 144 KTPKSTRPIATPMQIHPPMESIHPAASVNHTEGLNGSAVSVDQTTLPFRPSV 195
>gi|68478269|ref|XP_716876.1| hypothetical protein CaO19.8593 [Candida albicans SC5314]
gi|68478390|ref|XP_716816.1| hypothetical protein CaO19.978 [Candida albicans SC5314]
gi|46438500|gb|EAK97830.1| hypothetical protein CaO19.978 [Candida albicans SC5314]
gi|46438562|gb|EAK97891.1| hypothetical protein CaO19.8593 [Candida albicans SC5314]
Length = 732
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 96/175 (54%), Gaps = 17/175 (9%)
Query: 28 ASLLQFFVRQARSFITQ--HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 85
A+ L+F + + +++ + + +PF+ PVD L + +Y E++++PMD TI++K+
Sbjct: 386 AAELRFCNQTIKELMSKKHYNYNFPFLAPVDTVALNIPNYNEIVKQPMDLGTIQSKLANN 445
Query: 86 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL-QLLPK------ 138
+ Y N + DVRLVFKN +N E DV++M L F++KW + +P+
Sbjct: 446 E---YENADDFEKDVRLVFKNCYLFNPEGTDVNMMGHRLEAVFDKKWANKPVPEPTPQNS 502
Query: 139 -VMEEEKRQEEEEAKAQLDMQLTQ-EAVQT--NKAKELRSELNEVDMQ-LENLRE 188
V + E EEE+ + L++ A+Q N+ +R EL+E+ + L+ LRE
Sbjct: 503 DVSDREYSSEEEDNVEISEAMLSEIPAIQVMENQIIRMRKELDELKKEHLKKLRE 557
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 34 FVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 93
FV + +++ A PF+HPVD L + YY I +PMD STI+ K++ K Y +V
Sbjct: 217 FVLNTIKAVKRNREAVPFLHPVDTVKLNVPFYYNYIPRPMDLSTIERKINLK---AYEDV 273
Query: 94 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
++ D L+ KN K+N E + MA ++ +FE+ +++ PK
Sbjct: 274 SQVVDDFNLMVKNCKKFNGEAAGISKMATNIQAQFEKLMVKVPPK 318
>gi|325187425|emb|CCA21963.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 950
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
A PF+ PVD LG+ DY++VI++PMD TI+ ++ Y + + VRLVF NA
Sbjct: 419 AGPFLTPVDPVALGIPDYFKVIKEPMDLGTIRQNLESG---FYSDASILIEHVRLVFSNA 475
Query: 108 MKYNDERDDVHVMAKSLLEKF 128
M YN VH+ A+ L++ F
Sbjct: 476 MLYNAAHSQVHIFAQKLMDDF 496
>gi|405123328|gb|AFR98093.1| bromodomain transcription factor [Cryptococcus neoformans var.
grubii H99]
Length = 765
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 96/181 (53%), Gaps = 10/181 (5%)
Query: 31 LQFFVRQARSFITQHKW---AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 87
LQ+ R +S + +K+ PF++PV+ + DY VI++P+DF+ IKNK+ +
Sbjct: 402 LQWASRAIKSLESSNKYYIAVSPFLYPVEKIIEEVPDYATVIKRPIDFNIIKNKL--AEN 459
Query: 88 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQE 147
T Y +V ++ D+RL+ NA K+N +VH A LL+ +EEKW + +P +E E
Sbjct: 460 T-YEDVNQVDDDMRLMVANAQKFNPPGHEVHTSATQLLQIWEEKW-RTVPAKVETRDSSE 517
Query: 148 EEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGT 207
+ A+A D ++ Q + L S++ ++ Q+ LR + ++ ++ K T
Sbjct: 518 DPMAEAFDDYSSDEDNAQL---RSLESQVVALNQQISALRSKMTKRRAARGSKSKSKPKT 574
Query: 208 A 208
A
Sbjct: 575 A 575
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 17/126 (13%)
Query: 21 GGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKN 80
G L+ + ++ + RS + A+ F+ PVD + Y+ VI+ PMD T++
Sbjct: 202 GPNTPLTLTQHKYMLNAVRSLKKRLPDAYNFLVPVDTVRFNIPHYHTVIDTPMDLGTVET 261
Query: 81 KMDGKDGTG-----------------YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKS 123
K+ D G Y NV E+ DVR +++N+ K+N + V MA
Sbjct: 262 KLIVSDPRGPPKDKSKMSKWDTSKGKYNNVAEVTEDVRRIWENSRKFNGKEHPVSQMATR 321
Query: 124 LLEKFE 129
L E FE
Sbjct: 322 LEEAFE 327
>gi|291243780|ref|XP_002741778.1| PREDICTED: bromodomain containing 2-like [Saccoglossus kowalevskii]
Length = 821
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H++AWPF PV+ LGL DY+++I+ PMD TIK +++ Y + ++ +D L+F
Sbjct: 116 HQFAWPFHAPVNPAELGLPDYFDIIKNPMDLGTIKKRLESN---YYYSAKDCISDFNLMF 172
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
N YN +DV +MA++L + F K Q+
Sbjct: 173 TNCYLYNKPGEDVVLMAQALEKLFLTKVAQM 203
>gi|365761633|gb|EHN03272.1| Bdf2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 629
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 5/87 (5%)
Query: 49 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK-MDGKDGTGYRNVREIYADVRLVFKNA 107
+PF+ PVD L L +Y+E+I+ PMD TI N M+ K Y+ V + D+ LVF N
Sbjct: 335 FPFLQPVDPIALNLPNYFEIIKNPMDLGTISNNLMNWK----YKTVDQFINDLNLVFLNC 390
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQ 134
++N E ++VH+M K L E F WL+
Sbjct: 391 FQFNPEGNEVHLMGKKLKELFSVHWLE 417
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A PF++PVD L + Y+ ++ PMD S I K+ + Y +V ++ +D R +
Sbjct: 145 KDAKPFLNPVDPIALNIPHYFNYVQTPMDLSLIGKKL---QESTYHSVEQVKSDFRTMVN 201
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 140
N + +N V +MAK + FE K + P+V+
Sbjct: 202 NCLSFNGLESSVSLMAKRIQIYFERKLSAMPPRVL 236
>gi|428180935|gb|EKX49800.1| hypothetical protein GUITHDRAFT_67457 [Guillardia theta CCMP2712]
Length = 117
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
HK W F PVD L + DY E+I+KPMD T++ +D +GT N E +V L F
Sbjct: 22 HKHGWVFSEPVDPVKLNIPDYLEIIKKPMDLGTVRTHLD--NGT-ITNPEEFKTNVVLTF 78
Query: 105 KNAMKYNDERDDVHVMAKSLLE 126
NAM+YN DVH+MAK+L E
Sbjct: 79 DNAMRYNPSNHDVHIMAKTLKE 100
>gi|145479637|ref|XP_001425841.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392913|emb|CAK58443.1| unnamed protein product [Paramecium tetraurelia]
Length = 497
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 4/106 (3%)
Query: 36 RQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 95
++ I + K A F PVD + G+ DYYE++ KPMDF TIKNK+ + Y + +E
Sbjct: 395 KKVLGIIWKAKGAHLFHQPVDQKKYGISDYYEIVSKPMDFGTIKNKL---NSNVYSSCQE 451
Query: 96 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW-LQLLPKVM 140
Y DV VF+N + YN E +V + S+ ++F+ + L LL K +
Sbjct: 452 FYDDVLQVFENCILYNGETSEVGQIGLSIKQEFQNQLELTLLKKYL 497
>gi|47230592|emb|CAF99785.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1679
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 59/95 (62%), Gaps = 5/95 (5%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y+N+ DV
Sbjct: 1589 LERHQDAWPFLTPVNLKSV--PGYRKVIKKPMDFSTIREKLVSSQ---YQNLETFIIDVN 1643
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
LVF N ++N++ D+ ++ + FE++W +LL
Sbjct: 1644 LVFDNCERFNEDNSDIGRAGHNMRKFFEKRWTELL 1678
>gi|354544706|emb|CCE41432.1| hypothetical protein CPAR2_304210 [Candida parapsilosis]
Length = 748
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 88/162 (54%), Gaps = 5/162 (3%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+ + +PF+ PVD L L +Y++++++PMD TI++K+ Y N + DVRLV
Sbjct: 404 HYNYNFPFLAPVDAVALNLPNYHDIVKEPMDLGTIQSKL---TNNLYENADDFEKDVRLV 460
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWL-QLLPKVMEEEKRQEEEEAKAQLDMQLTQE 162
F+N +N E DV++M L F++KW+ + +P+ + +++ + + ++T+
Sbjct: 461 FRNCYAFNPEGTDVNMMGHRLEAIFDKKWVNKPVPEPTPQHSEASDDDFTSDEEEEITEA 520
Query: 163 AVQTNKAKE-LRSELNEVDMQLENLRETVIQKCRKMSTEEKK 203
+ A + L ++L + +LE ++ ++K R+ +K
Sbjct: 521 VLSEVPAIQFLENQLIRMKEELEKMKADHLKKLREQQAARRK 562
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
I + K A PF+ PVD L + YY I +PMD STI+ K+ + Y ++ ++ D
Sbjct: 223 IKRLKDAVPFLAPVDTVKLNVPFYYNYIPRPMDLSTIERKI---NANAYEDIAQVVDDFN 279
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
L+ +N K+N E + MA ++ FE+ L + PK
Sbjct: 280 LMVENCKKFNGEAAGISKMATNIQAHFEKHMLNVPPK 316
>gi|238882433|gb|EEQ46071.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 709
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 96/175 (54%), Gaps = 17/175 (9%)
Query: 28 ASLLQFFVRQARSFITQ--HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 85
A+ L+F + + +++ + + +PF+ PVD L + +Y E++++PMD TI++K+
Sbjct: 363 AAELRFCNQTIKELMSKKHYNYNFPFLAPVDTVALNIPNYNEIVKQPMDLGTIQSKLANN 422
Query: 86 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL-QLLPK------ 138
+ Y N + DVRLVFKN +N E DV++M L F++KW + +P+
Sbjct: 423 E---YENADDFEKDVRLVFKNCYLFNPEGTDVNMMGHRLEAVFDKKWANKPVPEPTPQNS 479
Query: 139 -VMEEEKRQEEEEAKAQLDMQLTQ-EAVQT--NKAKELRSELNEVDMQ-LENLRE 188
V + E EEE+ + L++ A+Q N+ +R EL+E+ + L+ LRE
Sbjct: 480 DVSDREYSSEEEDNVEISEAMLSEIPAIQVMENQIIRMRKELDELKKEHLKKLRE 534
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 34 FVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 93
FV + +++ A PF+HPVD L + YY I +PMD STI+ K++ K Y +V
Sbjct: 194 FVLNTIKAVKRNREAVPFLHPVDTVKLNVPFYYNYIPRPMDLSTIERKINLK---AYEDV 250
Query: 94 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
++ D L+ KN K+N E + MA ++ +FE+ +++ PK
Sbjct: 251 SQVVDDFNLMVKNCKKFNGEAAGISKMATNIQAQFEKLMVKVPPK 295
>gi|344231353|gb|EGV63235.1| Bromodomain-containing protein [Candida tenuis ATCC 10573]
Length = 503
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 65/108 (60%), Gaps = 5/108 (4%)
Query: 28 ASLLQFFVRQARSFITQHKWAW--PFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 85
A+ L+F + + I++ +++ PF+ PVD L + +Y ++I++PMD STI++K+
Sbjct: 182 AADLRFCNQILKDLISKKHFSYNFPFLQPVDAVALNIPNYSDIIKQPMDLSTIQSKLAN- 240
Query: 86 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 133
Y N E +DV L+F+N K+N E DV +M L + F++KW+
Sbjct: 241 --NQYENGDEFESDVTLMFENCYKFNPEGTDVSMMGHKLQDIFQKKWI 286
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A PF+ PVD+ L + YY + KPMD STI+ K+ + Y + D L+
Sbjct: 40 KDAGPFLKPVDIIKLNIPFYYNFVPKPMDLSTIEKKL---TVSAYEVPEQFIDDFNLMVS 96
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQ 165
N +K+N E + M K++ FE+ L PK E + + +K +++ Q + ++
Sbjct: 97 NCIKFNGENSPIAKMGKNIQAYFEKHMLNFPPK--EANESELSTASKRRIESQSSVPSIA 154
Query: 166 TNKAK 170
+N+ K
Sbjct: 155 SNRPK 159
>gi|440800738|gb|ELR21773.1| bromodomain domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 904
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
AWPF PVD LG+ Y+++I++PMDF TI K+ K+G Y + + DV LVF NA
Sbjct: 460 AWPFNQPVDPVALGIPTYFDIIKEPMDFGTINQKL--KNGK-YEVLAQFERDVHLVFANA 516
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 145
+ +N+ D+ AK L FE + +++ + EE++R
Sbjct: 517 LLFNEPDSDIGYWAKKLRGLFERRLVRVHNMLKEEKER 554
>gi|301608560|ref|XP_002933843.1| PREDICTED: bromodomain-containing protein 3 [Xenopus (Silurana)
tropicalis]
Length = 1013
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY++I+ PMD STI+ ++ + Y
Sbjct: 33 LQYLEKVVLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRL---EYNYY 89
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ D +F N YN DD+ VM++ L + F EK ++
Sbjct: 90 SKALDCIQDFNTMFTNCYIYNKPGDDIVVMSQELEKVFMEKIAEM 134
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF V L D + I+ PMD +TI++KM+ +G Y++ ++ +DVRL+F N
Sbjct: 312 YAWPFYK--TVIPTSLLDCSDAIKHPMDLATIRDKME--NGL-YKDTQDFASDVRLMFMN 366
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
+ KYN ++V MA+ + + FE
Sbjct: 367 SYKYNPPDNEVVNMARKMQDVFE 389
>gi|242769778|ref|XP_002341843.1| transcription regulator BDF1, putative [Talaromyces stipitatus ATCC
10500]
gi|218725039|gb|EED24456.1| transcription regulator BDF1, putative [Talaromyces stipitatus ATCC
10500]
Length = 798
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 47 WAW--PFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
WA PF +PVD L + Y+ VI+KPMD STI+ K+ K G Y N +E ADVRL+
Sbjct: 470 WAIANPFYYPVDPVALNIPTYHSVIKKPMDLSTIQVKL--KAGQ-YENAKEFEADVRLML 526
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
KN K+N D ++ + E F KW
Sbjct: 527 KNCFKFNIPGDPIYQAGQKFEEVFNSKW 554
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
+ PVD L + Y+ VI +PMD STI++K+ Y V E+ ADV L+ NA K+
Sbjct: 282 YREPVDPIKLNIPTYFTVITEPMDLSTIESKLKKNQ---YNTVAEVIADVDLMAGNAAKF 338
Query: 111 NDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEA 151
N V + L F K LQ LP E E+++ ++ A
Sbjct: 339 NGPEHIVSQEGQKLKALF-RKQLQKLPGPDEVEEKKPKKAA 378
>gi|190405078|gb|EDV08345.1| hypothetical protein SCRG_00567 [Saccharomyces cerevisiae RM11-1a]
Length = 643
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 42/240 (17%)
Query: 49 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK-MDGKDGTGYRNVREIYADVRLVFKNA 107
+PF+ PVD L L +Y++V++ PMD TI N M+ K Y+ + + D+ LVF N
Sbjct: 348 FPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWK----YKTIDQFVDDLNLVFYNC 403
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQ---LLPKV-----MEEEKRQEEEEAKAQLDMQL 159
++N E ++VH M K L E F WL+ +L ++ +EE+ + + D +
Sbjct: 404 FQFNPEGNEVHSMGKKLKELFNFHWLENQDILNEIETDSDLEEDNYSSSYSSDDEYDDED 463
Query: 160 TQEAVQTNKA-KELRSELNEVDMQLENLRETVIQKCRKMSTEEK-KNLGTALTRL----- 212
E TN A + L +L +++++L+ L+ Q+ K+S E K K+LG L R
Sbjct: 464 INENDITNPAIQYLEQKLKKMEVELQQLKR---QELSKLSKERKRKHLGKTLLRRKAMKH 520
Query: 213 SPEDLCKA----------------LEIVAENNPS---FHATAQEVDLDMDAQSELTLWRL 253
S +DL K+ + I+ + P+ + E+++D+D E T+ R+
Sbjct: 521 SVDDLKKSITDKINELSDLEMNGMIRIIKNSLPADEILTSNEDEIEIDLDILDEATIARI 580
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A PF+ PVD L + Y+ ++ PMD S I+ K+ G Y +V ++ +D + +
Sbjct: 158 KDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKL---QGNVYHSVEQVTSDFKTMVD 214
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 140
N + +N + MAK + + FE+K + P+V+
Sbjct: 215 NCLNFNGPESSISSMAKRIQKYFEKKLSAMPPRVL 249
>gi|6320132|ref|NP_010213.1| Bdf2p [Saccharomyces cerevisiae S288c]
gi|74583636|sp|Q07442.1|BDF2_YEAST RecName: Full=Bromodomain-containing factor 2
gi|1431082|emb|CAA98636.1| BDF2 [Saccharomyces cerevisiae]
gi|285810964|tpg|DAA11788.1| TPA: Bdf2p [Saccharomyces cerevisiae S288c]
gi|392300048|gb|EIW11139.1| Bdf2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 638
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 42/240 (17%)
Query: 49 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK-MDGKDGTGYRNVREIYADVRLVFKNA 107
+PF+ PVD L L +Y++V++ PMD TI N M+ K Y+ + + D+ LVF N
Sbjct: 343 FPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWK----YKTIDQFVDDLNLVFYNC 398
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQ---LLPKV-----MEEEKRQEEEEAKAQLDMQL 159
++N E ++VH M K L E F WL+ +L ++ +EE+ + + D +
Sbjct: 399 FQFNPEGNEVHSMGKKLKELFNFHWLENQDILNEIETDSDLEEDNYSSSYSSDDEYDDED 458
Query: 160 TQEAVQTNKA-KELRSELNEVDMQLENLRETVIQKCRKMSTEEK-KNLGTALTRL----- 212
E TN A + L +L +++++L+ L+ Q+ K+S E K K+LG L R
Sbjct: 459 INENDITNPAIQYLEQKLKKMEVELQQLKR---QELSKLSKERKRKHLGKTLLRRKAMKH 515
Query: 213 SPEDLCKA----------------LEIVAENNPS---FHATAQEVDLDMDAQSELTLWRL 253
S +DL K+ + I+ + P+ + E+++D+D E T+ R+
Sbjct: 516 SVDDLKKSITDKINELSDLEMNGMIRIIKNSLPADEILTSNEDEIEIDLDILDEATIARI 575
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A PF+ PVD L + Y+ ++ PMD S I+ K+ G Y +V ++ +D + +
Sbjct: 153 KDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKL---QGNVYHSVEQVTSDFKTMVD 209
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 140
N + +N + MAK + + FE+K + P+V+
Sbjct: 210 NCLNFNGPESSISSMAKRIQKYFEKKLSAMPPRVL 244
>gi|327283518|ref|XP_003226488.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Anolis carolinensis]
Length = 2184
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K++ Y N+ DVRLVF
Sbjct: 2095 HEDAWPFLLPVNLKHV--PGYRKVIKKPMDFSTIREKLNSGQ---YPNLEAFAVDVRLVF 2149
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
N +N++ D+ ++ + FE+KW ++
Sbjct: 2150 DNCETFNEDDSDIGRAGHNMRKHFEKKWTEIF 2181
>gi|396464495|ref|XP_003836858.1| similar to bromodomain containing protein [Leptosphaeria maculans
JN3]
gi|312213411|emb|CBX93493.1| similar to bromodomain containing protein [Leptosphaeria maculans
JN3]
Length = 907
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 8/104 (7%)
Query: 29 SLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGT 88
S++ ++ S IT +PF PVD L + Y ++I+KPMDF TI+ + K+G
Sbjct: 551 SVMTELMKPKYSAIT-----FPFTSPVDPVALNIPSYLKIIKKPMDFGTIERNL--KNGL 603
Query: 89 GYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
Y++ ++ YAD +LVF+N K+N E D V+ M L + FE W
Sbjct: 604 -YQSAKDFYADAQLVFQNCYKFNPEGDAVNKMGHQLEDLFESLW 646
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
F PV+ LG+ Y E+++ PMD ST+++K+ K Y NVRE AD+ + +N+ +
Sbjct: 362 FKDPVNPVLLGIPTYPEIVKHPMDLSTMEHKLKDKK---YNNVREFMADLDQMIENSELF 418
Query: 111 NDERDDVHVMAKSLLEKF 128
N++ V +L F
Sbjct: 419 NNKHHPVTQAGYNLRAYF 436
>gi|259145174|emb|CAY78438.1| Bdf2p [Saccharomyces cerevisiae EC1118]
Length = 638
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 42/240 (17%)
Query: 49 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK-MDGKDGTGYRNVREIYADVRLVFKNA 107
+PF+ PVD L L +Y++V++ PMD TI N M+ K Y+ + + D+ LVF N
Sbjct: 343 FPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWK----YKTIDQFVDDLNLVFYNC 398
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQ---LLPKV-----MEEEKRQEEEEAKAQLDMQL 159
++N E ++VH M K L E F WL+ +L ++ +EE+ + + D +
Sbjct: 399 FQFNPEGNEVHSMGKKLKELFNFHWLENQDILNEIETDSDLEEDNYSSSYSSDDEYDDED 458
Query: 160 TQEAVQTNKA-KELRSELNEVDMQLENLRETVIQKCRKMSTEEK-KNLGTALTRL----- 212
E TN A + L +L +++++L+ L+ Q+ K+S E K K+LG L R
Sbjct: 459 INENDITNPAIQYLEQKLKKMEVELQQLKR---QELSKLSKERKRKHLGKTLLRRKAMKH 515
Query: 213 SPEDLCKA----------------LEIVAENNPS---FHATAQEVDLDMDAQSELTLWRL 253
S +DL K+ + I+ + P+ + E+++D+D E T+ R+
Sbjct: 516 SVDDLKKSITDKINELSDLEMNGMIRIIKNSLPADEILTSNEDEIEIDLDILDEATIARI 575
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A PF+ PVD L + Y+ ++ PMD S I+ K+ G Y +V ++ +D + +
Sbjct: 153 KDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKL---QGNVYHSVEQVTSDFKTMVD 209
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 140
N + +N + MAK + + FE+K + P+V+
Sbjct: 210 NCLNFNGPESSISSMAKRIQKYFEKKLSAMPPRVL 244
>gi|323349464|gb|EGA83688.1| Bdf2p [Saccharomyces cerevisiae Lalvin QA23]
Length = 633
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 42/240 (17%)
Query: 49 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK-MDGKDGTGYRNVREIYADVRLVFKNA 107
+PF+ PVD L L +Y++V++ PMD TI N M+ K Y+ + + D+ LVF N
Sbjct: 338 FPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWK----YKTIDQFVDDLNLVFYNC 393
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQ---LLPKV-----MEEEKRQEEEEAKAQLDMQL 159
++N E ++VH M K L E F WL+ +L ++ +EE+ + + D +
Sbjct: 394 FQFNPEGNEVHSMGKKLKELFNFHWLENQDILNEIETDSDLEEDNYSSSYSSDDEYDDED 453
Query: 160 TQEAVQTNKA-KELRSELNEVDMQLENLRETVIQKCRKMSTEEK-KNLGTALTRL----- 212
E TN A + L +L +++++L+ L+ Q+ K+S E K K+LG L R
Sbjct: 454 INENDITNPAIQYLEQKLKKMEVELQQLKR---QELSKLSKERKRKHLGKTLLRRKAMKH 510
Query: 213 SPEDLCKA----------------LEIVAENNPS---FHATAQEVDLDMDAQSELTLWRL 253
S +DL K+ + I+ + P+ + E+++D+D E T+ R+
Sbjct: 511 SVDDLKKSITDKINELSDLEMNGMIRIIKNSLPADEILTSNEDEIEIDLDILDEATIARI 570
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A PF+ PVD L + Y+ ++ PMD S I+ K+ G Y +V ++ +D + +
Sbjct: 148 KDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKL---QGNVYHSVEQVTSDFKTMVD 204
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 140
N + +N + MAK + + FE+K + P+V+
Sbjct: 205 NCLNFNGPESSISSMAKRIQKYFEKKLSAMPPRVL 239
>gi|307104678|gb|EFN52930.1| hypothetical protein CHLNCDRAFT_53989 [Chlorella variabilis]
Length = 1253
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM-----DGKDGTGYRNVREIYADVRL 102
A PF PVD EGLG+ +Y +VI +PMD TI++++ DG +GYR E+ ADV L
Sbjct: 513 AEPFSEPVDAEGLGIPEYRQVIRRPMDLGTIRDRLTSGLRDGWAASGYRGADEVAADVAL 572
Query: 103 VFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
+ N KYN + MA + F + W
Sbjct: 573 TWANCRKYNAAGSRICGMAARMEAAFRKLW 602
>gi|207346961|gb|EDZ73294.1| YDL070Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 614
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 42/240 (17%)
Query: 49 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK-MDGKDGTGYRNVREIYADVRLVFKNA 107
+PF+ PVD L L +Y++V++ PMD TI N M+ K Y+ + + D+ LVF N
Sbjct: 343 FPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWK----YKTIDQFVDDLNLVFYNC 398
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQ---LLPKV-----MEEEKRQEEEEAKAQLDMQL 159
++N E ++VH M K L E F WL+ +L ++ +EE+ + + D +
Sbjct: 399 FQFNPEGNEVHSMGKKLKELFNFHWLENQDILNEIETDSDLEEDNYSSSYSSDDEYDDED 458
Query: 160 TQEAVQTNKA-KELRSELNEVDMQLENLRETVIQKCRKMSTEEK-KNLGTALTRL----- 212
E TN A + L +L +++++L+ L+ Q+ K+S E K K+LG L R
Sbjct: 459 INENDITNPAIQYLEQKLKKMEVELQQLKR---QELSKLSKERKRKHLGKTLLRRKAMKH 515
Query: 213 SPEDLCKA----------------LEIVAENNPS---FHATAQEVDLDMDAQSELTLWRL 253
S +DL K+ + I+ + P+ + E+++D+D E T+ R+
Sbjct: 516 SVDDLKKSITDKINELSDLEMNGMIRIIKNSLPADEILTSNEDEIEIDLDILDEATIARI 575
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A PF+ PVD L + Y+ ++ PMD S I+ K+ G Y +V ++ +D + +
Sbjct: 153 KDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKL---QGNVYHSVEQVTSDFKTMVD 209
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 140
N + +N + MAK + + FE+K + P+V+
Sbjct: 210 NCLNFNGPESSISSMAKRIQKYFEKKLSAMPPRVL 244
>gi|407917747|gb|EKG11050.1| hypothetical protein MPH_11793 [Macrophomina phaseolina MS6]
Length = 897
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 140/301 (46%), Gaps = 46/301 (15%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+++PF+ PVD L + Y ++I+KPMD T+++++ K G Y + ++ AD+ L+F N
Sbjct: 559 FSYPFLQPVDPVALNIPQYLKIIKKPMDLGTVQSRL--KHGE-YTSAKDAKADLDLIFAN 615
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEA--------------- 151
K+N E DDV+ M L + + W + + MEE E +
Sbjct: 616 CYKFNPEGDDVNKMGHMLEDVYRRAWEKKA-EWMEEHAPASEPASASEDEDDEESEDEDD 674
Query: 152 -------KAQLD---MQLTQE--AVQTNKAKELR------SELNEVDMQLENLRETVI-- 191
+AQ+ M LTQE A+Q K K + S+ + + + L +
Sbjct: 675 EEEIRRRQAQIAEQIMMLTQEQLALQAKKGKSPKVVGKKTSKKEKTQTKSKKLSKPAAPV 734
Query: 192 ---QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHAT-AQEVDLDMDAQSE 247
+K R+++ EEK+ + ++ L + KA++I+ PS E++LD+D
Sbjct: 735 KPKKKLRQITFEEKRLISETISNLDEHQMAKAVQIIRNGVPSLQGVNDDELELDIDTIPN 794
Query: 248 LTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDAL 307
L L +++ ++ ++ ++ + +++ + + K+ + + KN P K E A+
Sbjct: 795 EVLHDLLKYIK-TINPSTTAAPALPAFDDDY--EPPSRKNTATQPRKNKPMGKHEQEQAI 851
Query: 308 A 308
A
Sbjct: 852 A 852
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A F+HPVD L + Y +VI PMD ST++ K K Y++V +D L+
Sbjct: 358 KPAAAFLHPVDPVALNIPHYPQVITNPMDLSTLEAKHKEKQ---YQSVDAFMSDFYLMID 414
Query: 106 NAMKYNDERDDVHVMAKSL--LEKFEEKWLQLLP 137
N + +N + H +A+S L+ + E+ + LLP
Sbjct: 415 NCVLFNGIQ---HPIAQSAWNLQMWFERGMHLLP 445
>gi|357144694|ref|XP_003573382.1| PREDICTED: transcription factor GTE10-like [Brachypodium
distachyon]
Length = 488
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 92/224 (41%), Gaps = 16/224 (7%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA-DVRL 102
Q W F PVDVE L LHDY+ VI PMD T+K + G + E +A DVRL
Sbjct: 146 QRNSVW-FNKPVDVERLKLHDYHAVIRNPMDLGTVKENLTA----GRYHSHEAFADDVRL 200
Query: 103 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQE 162
F NA++YN VH A SLL FE + + + +E + E + L
Sbjct: 201 TFNNALRYNPVGHQVHRSAGSLLASFEGMYGEAVSWFEQECEHFEPMQLALPPPPMLALP 260
Query: 163 AVQTNKAKELRSELNEVDMQLENLRETVIQKC---------RKMSTEEKKNLGTALTRLS 213
+Q E R ++ R+MS EEK L + L
Sbjct: 261 PPPQPLVPVPVRVSPVPRLQ-EPPRMGPGRRPKPKAREPNKREMSDEEKHKLRVEIENLP 319
Query: 214 PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 257
E + L+IV + + + V+LD D TLW L FV
Sbjct: 320 EEKMENVLQIVQKRSSDPALMGEVVELDFDEMDVDTLWELDRFV 363
>gi|242058181|ref|XP_002458236.1| hypothetical protein SORBIDRAFT_03g029565 [Sorghum bicolor]
gi|241930211|gb|EES03356.1| hypothetical protein SORBIDRAFT_03g029565 [Sorghum bicolor]
Length = 225
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 13/93 (13%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA-----DVRL 102
W F PVD LGL DYY V+ PMD T+ +++ + R +Y DVRL
Sbjct: 76 GWVFDAPVDARALGLRDYYTVVADPMDLGTVLRRLERR--------RYVYPTAFADDVRL 127
Query: 103 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
F+NAM YNDE D V+ A L FE +W +
Sbjct: 128 TFRNAMSYNDEGDPVYESAAELSGIFEARWASI 160
>gi|255732041|ref|XP_002550944.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131230|gb|EER30790.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 730
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 7/123 (5%)
Query: 20 EGGCKNLSASLLQF----FVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDF 75
E NL A+ + FV I +++ A PF+HPVD L + YY I +PMD
Sbjct: 194 EPDVNNLPANPIPAHQSKFVLNVIKVIKRNREAVPFLHPVDTVKLNIPFYYNYIPRPMDL 253
Query: 76 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
STI+ K++ K Y +V +I D L+ KN K+N E + MA ++ +FE+ +++
Sbjct: 254 STIERKINLK---AYEDVSQIIDDFNLMVKNCKKFNGEAAGISKMASNIQAQFEKHMVKV 310
Query: 136 LPK 138
PK
Sbjct: 311 PPK 313
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 62/107 (57%), Gaps = 5/107 (4%)
Query: 28 ASLLQFFVRQARSFITQ--HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 85
A+ L+F + + +++ + + +PF+ PVD L + +Y E++++PMD TI+ K+
Sbjct: 374 AAELRFCNQTIKELMSKKHYNYNFPFLAPVDTVALNIPNYREIVKEPMDLGTIQTKLTNN 433
Query: 86 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
+ Y N + DVRLVFKN +N E DV++M L F++KW
Sbjct: 434 E---YENGDQFEKDVRLVFKNCYAFNPEGTDVNMMGHRLEAVFDKKW 477
>gi|410968711|ref|XP_003990845.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Felis catus]
Length = 2171
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2082 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFAVDVRLVF 2136
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
N +N++ D+ S+ + FE+KW +
Sbjct: 2137 DNCETFNEDDSDIGRAGHSMRKYFEKKWTDIF 2168
>gi|198456597|ref|XP_001360386.2| GA15830 [Drosophila pseudoobscura pseudoobscura]
gi|198135670|gb|EAL24961.2| GA15830 [Drosophila pseudoobscura pseudoobscura]
Length = 265
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 7/187 (3%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +Q+K AW F P+D LGLHDY+++++KPMD ++I+ ++ Y N E D
Sbjct: 33 FSSQYKKLAWIFYEPIDAPYLGLHDYHKIVKKPMDLNSIRTRLQAG---LYVNADEFVRD 89
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQL 159
VRL+F N Y H MAK L FE + ++ + E + + +
Sbjct: 90 VRLMFDNTYLYTTPDHLCHQMAKKLQAIFEAMFFEI--ASTDSSDTITETDVSSMFPIAT 147
Query: 160 TQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCK 219
+A N K+ ++ Q R R + +E +LG L L E L +
Sbjct: 148 IPDA-PINPHKDGGVKMTRARRQQLQSRSANEAAVRPWTAKENNHLGDRLQELKGEVLHR 206
Query: 220 ALEIVAE 226
+ I+ E
Sbjct: 207 VIHIIKE 213
>gi|168038855|ref|XP_001771915.1| single bromodomain-containing protein [Physcomitrella patens subsp.
patens]
gi|162676866|gb|EDQ63344.1| single bromodomain-containing protein [Physcomitrella patens subsp.
patens]
Length = 672
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
I + K A PF PVD LG+ DY+EV+++PMD TI+++++ G Y V +++ DV
Sbjct: 274 IMKMKEAGPFNKPVDPVKLGIPDYFEVVKRPMDLGTIRDRLE--KGEVYNTVDDVFEDVA 331
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 133
LV+ N YND+ D + K+L F++ L
Sbjct: 332 LVWSNCRTYNDDGDPIMEFLKNLESTFQKLCL 363
>gi|410979451|ref|XP_003996097.1| PREDICTED: bromodomain-containing protein 3 [Felis catus]
Length = 695
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENSYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 81 KMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 332 KMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 383
>gi|145510564|ref|XP_001441215.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408454|emb|CAK73818.1| unnamed protein product [Paramecium tetraurelia]
Length = 489
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A F +PVD + G++DYY+++++PMDF T+K K+ + Y+N +E Y D+ LVF
Sbjct: 396 KGAQLFHNPVDEKKYGINDYYDIVKRPMDFGTVKQKL---NANQYKNCKEFYHDIMLVFD 452
Query: 106 NAMKYNDERDDVHVMAKSLLEKF 128
N + YN +D+ + SL ++F
Sbjct: 453 NCILYNGSENDIGQIGLSLKQEF 475
>gi|426020769|sp|F7DRV9.1|BRDT_XENTR RecName: Full=Bromodomain testis-specific protein
Length = 933
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY++I+ PMD STI+ ++ + Y
Sbjct: 33 LQYLEKVVLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRL---EYNYY 89
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ D +F N YN DD+ VM++ L + F EK ++
Sbjct: 90 SKALDCIQDFNTMFTNCYIYNKPGDDIVVMSQELEKVFMEKIAEM 134
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF V L D + I+ PMD +TI++KM+ +G Y++ ++ +DVRL+F N
Sbjct: 302 YAWPFYK--TVIPTSLLDCSDAIKHPMDLATIRDKME--NGL-YKDTQDFASDVRLMFMN 356
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
+ KYN ++V MA+ + + FE
Sbjct: 357 SYKYNPPDNEVVNMARKMQDVFE 379
>gi|326923162|ref|XP_003207809.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Meleagris gallopavo]
Length = 2126
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI++K+ Y NV DVRLVF
Sbjct: 2037 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIRDKLTSGQ---YPNVEAFSLDVRLVF 2091
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
N +N++ D+ ++ + FE+KW ++
Sbjct: 2092 DNCETFNEDDSDIGRAGHNMRKYFEKKWTEIF 2123
>gi|114108122|gb|AAI23311.1| LOC398944 protein [Xenopus laevis]
Length = 465
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H+++WPF PVD L L DYY++I+ PMD STI+ ++ + Y
Sbjct: 33 LQYLEKLVLKSLWRHQFSWPFQQPVDAVKLNLPDYYQIIKNPMDLSTIRKRL---EYNYY 89
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ D +F N YN DD+ +MA+ L + F EK ++
Sbjct: 90 SKALDCIQDFNTMFTNCYIYNKPGDDIVLMAQELEKAFMEKIAEM 134
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF DV L DY + ++ PMD TI++KM+ +G Y++ ++ +DVRL+F N
Sbjct: 311 YAWPFYK--DVIPTSLLDYSDAMKHPMDLGTIRDKME--NGL-YKDTQDFASDVRLMFMN 365
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN ++V MA+ L + FE
Sbjct: 366 CYKYNPPDNEVVNMARKLQDVFE 388
>gi|371927839|pdb|4A9E|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927840|pdb|4A9E|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927841|pdb|4A9E|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927842|pdb|4A9F|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
1-Methylpyrrolidin-2-One
gi|371927843|pdb|4A9F|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
1-Methylpyrrolidin-2-One
gi|371927844|pdb|4A9F|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
1-Methylpyrrolidin-2-One
gi|371927869|pdb|4A9H|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
1-(2-Methyl-1,2,3, 4-Tetrahydroquinolin-1-Yl)ethan-1-One
gi|371927870|pdb|4A9H|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
1-(2-Methyl-1,2,3, 4-Tetrahydroquinolin-1-Yl)ethan-1-One
gi|371927871|pdb|4A9H|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
1-(2-Methyl-1,2,3, 4-Tetrahydroquinolin-1-Yl)ethan-1-One
gi|371927872|pdb|4A9I|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927873|pdb|4A9I|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927874|pdb|4A9I|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927875|pdb|4A9J|A Chain A, N-Terminal Bromodomain Of Human Brd2 With N-(4-
Hydroxyphenyl)acetamide
gi|371927876|pdb|4A9J|B Chain B, N-Terminal Bromodomain Of Human Brd2 With N-(4-
Hydroxyphenyl)acetamide
gi|371927877|pdb|4A9J|C Chain C, N-Terminal Bromodomain Of Human Brd2 With N-(4-
Hydroxyphenyl)acetamide
gi|374977910|pdb|4A9M|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopentyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977911|pdb|4A9M|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopentyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977912|pdb|4A9M|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopentyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977913|pdb|4A9N|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopropyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977914|pdb|4A9N|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopropyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977915|pdb|4A9N|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopropyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977916|pdb|4A9O|A Chain A, N-Terminal Bromodomain Of Human Brd2 With 5
Ethyl-3-Methyl- 4-Phenyl-1,2-Oxazole
gi|374977917|pdb|4A9O|B Chain B, N-Terminal Bromodomain Of Human Brd2 With 5
Ethyl-3-Methyl- 4-Phenyl-1,2-Oxazole
gi|374977918|pdb|4A9O|C Chain C, N-Terminal Bromodomain Of Human Brd2 With 5
Ethyl-3-Methyl- 4-Phenyl-1,2-Oxazole
gi|383875671|pdb|4ALH|A Chain A, N-Terminal Bromodomain Of Human Brd2 With 3,5 Dimethyl-4-
Phenyl-1,2-Oxazole
gi|383875672|pdb|4ALH|B Chain B, N-Terminal Bromodomain Of Human Brd2 With 3,5 Dimethyl-4-
Phenyl-1,2-Oxazole
gi|383875673|pdb|4ALH|C Chain C, N-Terminal Bromodomain Of Human Brd2 With 3,5 Dimethyl-4-
Phenyl-1,2-Oxazole
gi|393715366|pdb|4ALG|A Chain A, N-Terminal Bromodomain Of Human Brd2 With Ibet-151
Length = 154
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 33 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 89
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 90 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 130
>gi|45382753|ref|NP_990008.1| bromodomain adjacent to zinc finger domain protein 2B [Gallus gallus]
gi|22653663|sp|Q9DE13.1|BAZ2B_CHICK RecName: Full=Bromodomain adjacent to zinc finger domain protein 2B;
AltName: Full=Extracellular matrix protein F22
gi|11526817|gb|AAG36791.1|AF224275_1 extracellular matrix protein F22 [Gallus gallus]
Length = 2130
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI++K+ Y NV DVRLVF
Sbjct: 2041 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIRDKLTSGQ---YPNVEAFSLDVRLVF 2095
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
N +N++ D+ ++ + FE+KW ++
Sbjct: 2096 DNCETFNEDDSDIGRAGHNMRKYFEKKWTEIF 2127
>gi|429242322|ref|NP_593620.3| bromodomain protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|391358177|sp|Q9HGP4.3|YK82_SCHPO RecName: Full=Bromodomain-containing protein C631.02
gi|347834104|emb|CAC05484.3| bromodomain protein (predicted) [Schizosaccharomyces pombe]
Length = 727
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Query: 44 QHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRL 102
QH+ +A+PF PV+ G DY++VI+ PMD T++NK++ + Y +++ AD+ L
Sbjct: 408 QHEAYAYPFYKPVNPTACGCPDYFKVIKHPMDLGTMQNKLNHNE---YASMKAFEADMVL 464
Query: 103 VFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
+FKN K+N VH+M K L F++ W
Sbjct: 465 MFKNCYKFNSAGTPVHLMGKKLESIFQKLW 494
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
+ PF PVD + DY +I+ P+D T++ K G Y + + D+ L+F N
Sbjct: 251 SIPFRAPVDPVKQNIPDYPTIIKNPIDLGTMQKKFSS--GV-YSSAQHFIDDMNLMFSNC 307
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQL 135
YN V VM K+L FE + QL
Sbjct: 308 FLYNGTESPVGVMGKNLQATFERQLKQL 335
>gi|195149830|ref|XP_002015858.1| GL11280 [Drosophila persimilis]
gi|194109705|gb|EDW31748.1| GL11280 [Drosophila persimilis]
Length = 265
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 83/187 (44%), Gaps = 7/187 (3%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +Q+K AW F P+D LGLHDY+++++KPMD ++I+ ++ Y N E D
Sbjct: 33 FSSQYKKLAWIFYEPIDAPYLGLHDYHKIVKKPMDLNSIRTRLQAG---LYVNADEFVRD 89
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQL 159
VRL+F N Y H MAK L FE + ++ + E + + +
Sbjct: 90 VRLMFDNTYLYTTPDHLCHQMAKKLQAIFEAMFFEI--ASTDSSDTITETDVSSMFPIAT 147
Query: 160 TQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCK 219
+A N K+ ++ Q R R + +E +LG L L E L +
Sbjct: 148 IPDA-PINPHKDGGVKMTRARRQQLQSRSANEAAVRPWTAKENNHLGDRLQELKGEVLHR 206
Query: 220 ALEIVAE 226
+ I+ E
Sbjct: 207 VIHIIKE 213
>gi|410348356|gb|JAA40782.1| bromodomain adjacent to zinc finger domain, 2B [Pan troglodytes]
Length = 2176
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ G Y N+ DVRLVF
Sbjct: 2087 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSGGQ---YPNLETFALDVRLVF 2141
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ ++ + FE+KW
Sbjct: 2142 DNCETFNEDDSDIGRAGHNMRKYFEKKW 2169
>gi|345797221|ref|XP_856450.2| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
isoform 2 [Canis lupus familiaris]
Length = 2169
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2080 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFAVDVRLVF 2134
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
N +N++ D+ S+ + FE+KW +
Sbjct: 2135 DNCETFNEDDSDIGRAGHSMRKYFEKKWTDIF 2166
>gi|38014413|gb|AAH60452.1| LOC398944 protein, partial [Xenopus laevis]
Length = 466
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H+++WPF PVD L L DYY++I+ PMD STI+ ++ + Y
Sbjct: 33 LQYLEKLVLKSLWRHQFSWPFQQPVDAVKLNLPDYYQIIKNPMDLSTIRKRL---EYNYY 89
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ D +F N YN DD+ +MA+ L + F EK ++
Sbjct: 90 SKALDCIQDFNTMFTNCYIYNKPGDDIVLMAQELEKAFMEKIAEM 134
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF DV L DY + ++ PMD TI++KM+ +G Y++ ++ +DVRL+F N
Sbjct: 311 YAWPFYK--DVIPTSLLDYSDAMKHPMDLGTIRDKME--NGL-YKDTQDFASDVRLMFMN 365
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN ++V MA+ L + FE
Sbjct: 366 CYKYNPPDNEVVNMARKLQDVFE 388
>gi|340707459|pdb|2YDW|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gw841819x
gi|340707460|pdb|2YDW|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gw841819x
gi|340707461|pdb|2YDW|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gw841819x
gi|340707481|pdb|2YEK|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gsk525762 (Ibet)
gi|340707482|pdb|2YEK|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gsk525762 (Ibet)
gi|340707483|pdb|2YEK|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gsk525762 (Ibet)
gi|393715359|pdb|4AKN|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
Tbutyl-Phenyl-Amino-
Dimethyl-Oxazolyl-Quinoline-Carboxylic Acid
gi|393715360|pdb|4AKN|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
Tbutyl-Phenyl-Amino-
Dimethyl-Oxazolyl-Quinoline-Carboxylic Acid
gi|393715361|pdb|4AKN|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
Tbutyl-Phenyl-Amino-
Dimethyl-Oxazolyl-Quinoline-Carboxylic Acid
Length = 153
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 33 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 89
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 90 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 130
>gi|397500603|ref|XP_003820998.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B [Pan
paniscus]
Length = 2168
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ G Y N+ DVRLVF
Sbjct: 2079 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSGGQ---YPNLETFALDVRLVF 2133
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ ++ + FE+KW
Sbjct: 2134 DNCETFNEDDSDIGRAGHNMRKYFEKKW 2161
>gi|428178605|gb|EKX47480.1| hypothetical protein GUITHDRAFT_50108, partial [Guillardia theta
CCMP2712]
Length = 90
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV-REIYADV 100
++ K AWPF PVD + L L DY++++++PMD STI++++ G++ Y+ V E + D+
Sbjct: 6 VSNDKHAWPFEEPVDAKKLKLKDYHKIVKEPMDLSTIRSRLQGEE---YKRVEEEFHRDM 62
Query: 101 RLVFKNAMKYNDERDDVHVMAKSLLEKF 128
LVF NA+ +N E D +H A+ L KF
Sbjct: 63 HLVFDNALLFNHEGDPIHEYAEQLKMKF 90
>gi|328863827|gb|EGG12926.1| hypothetical protein MELLADRAFT_46486 [Melampsora larici-populina
98AG31]
Length = 339
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K+ WPF PVD LG+ +Y +I+KPMD STIK K+D + Y+ AD RL+
Sbjct: 106 KFVWPFYEPVDPVKLGVPEYLTIIKKPMDLSTIKQKLDRGE---YKAGAAFAADFRLMLN 162
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N V+ K L FE+KW
Sbjct: 163 NCFTFNPVGTPVYNFGKQLECLFEQKW 189
>gi|195025255|ref|XP_001986029.1| GH20765 [Drosophila grimshawi]
gi|193902029|gb|EDW00896.1| GH20765 [Drosophila grimshawi]
Length = 532
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 29/158 (18%)
Query: 6 RSSSKMHFIGKKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDY 65
R ++KMH+I K +F+R+ + Q ++A FM PVD E L + Y
Sbjct: 30 RYTNKMHYIKK----------------YFLRE----LQQQQFAIDFMKPVDTELLNVPTY 69
Query: 66 YEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKS-L 124
Y VI++PMD TI ++D + Y+ V E+ DV+L+ N +N R D HV
Sbjct: 70 YNVIKRPMDLGTIIQRLDNR---YYQTVDELIDDVKLIIYNCYTFN--RPDAHVYRNCQR 124
Query: 125 LEKFEEKWLQLLP---KVMEEEKRQEEEEAKAQLDMQL 159
LE F + L LP +V+ + R E+ K Q + +L
Sbjct: 125 LETFLQNVLAKLPGGEEVLSTKGRCEKSVCKRQCNQRL 162
>gi|321456598|gb|EFX67701.1| hypothetical protein DAPPUDRAFT_261209 [Daphnia pulex]
Length = 200
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ R + ++ AWPF PVD + LGL DY++VI+ PMD T+ +++ Y
Sbjct: 37 LQYLQRTVLPALWDYRHAWPFHEPVDTKKLGLIDYFQVIKFPMDLGTVMKRLENH---YY 93
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 143
+ + D+ ++F N YND ++D+ M + LEK + L +PKV EE
Sbjct: 94 WSALDCIRDINILFANCYTYNDPKEDLVWMGQQ-LEKIFRRQLARMPKVEMEE 145
>gi|410035848|ref|XP_525949.4| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B [Pan
troglodytes]
Length = 2198
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ G Y N+ DVRLVF
Sbjct: 2109 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSGGQ---YPNLETFALDVRLVF 2163
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ ++ + FE+KW
Sbjct: 2164 DNCETFNEDDSDIGRAGHNMRKYFEKKW 2191
>gi|151941931|gb|EDN60287.1| bromodomain factor [Saccharomyces cerevisiae YJM789]
Length = 638
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 94/174 (54%), Gaps = 18/174 (10%)
Query: 49 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK-MDGKDGTGYRNVREIYADVRLVFKNA 107
+PF+ PVD L L +Y++V++ PMD TI N M+ K Y+ + + D+ LVF N
Sbjct: 343 FPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWK----YKTIDQFVDDLNLVFYNC 398
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQ---LLPKV-----MEEEKRQEEEEAKAQLDMQL 159
++N E ++VH M K+L E F WL+ +L ++ +EE+ + + D +
Sbjct: 399 FQFNPEGNEVHSMGKNLKELFNFHWLENQDILNEIETDSDLEEDNYSSSYSSDDEYDDED 458
Query: 160 TQEAVQTNKA-KELRSELNEVDMQLENLRETVIQKCRKMSTEEK-KNLGTALTR 211
E TN A + L +L +++++L+ L+ Q+ K+S E K K+LG L R
Sbjct: 459 INENDITNPAIQYLEQKLKKMEVELQQLKR---QELSKLSKERKRKHLGKTLLR 509
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A PF+ PVD L + Y+ ++ PMD S I+ K+ G Y +V ++ +D + +
Sbjct: 153 KDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKL---QGNVYHSVEQVTSDFKTMVD 209
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 140
N + +N + MAK + + FE+K + P+V+
Sbjct: 210 NCLNFNGPESSISSMAKRIQKYFEKKLSAMPPRVL 244
>gi|241955217|ref|XP_002420329.1| bromodomain-containing transcription factor, putative; protein
involved in transcription initiation at TATA-containing
promoters, putative [Candida dubliniensis CD36]
gi|223643671|emb|CAX41404.1| bromodomain-containing transcription factor, putative [Candida
dubliniensis CD36]
Length = 721
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 62/107 (57%), Gaps = 5/107 (4%)
Query: 28 ASLLQFFVRQARSFITQ--HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 85
A+ L+F + + +++ + + +PF+ PVD L + +Y E+++ PMD TI++K+
Sbjct: 373 AAELRFCNQTIKELMSKKHYNYNFPFLAPVDTVALNIPNYNEIVKHPMDLGTIQSKLANN 432
Query: 86 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
+ Y N + DVRLVFKN +N E DV++M L F++KW
Sbjct: 433 E---YENADDFEKDVRLVFKNCYLFNPEGTDVNMMGHRLEAVFDKKW 476
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 34 FVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 93
FV + +++ A PF+HPVD L + YY I +PMD STI+ K++ K Y NV
Sbjct: 202 FVLNTIKAVKRNREAVPFLHPVDTVKLNVPFYYNYIPRPMDLSTIERKINLK---AYENV 258
Query: 94 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
++ D L+ KN K+N E + MA ++ +FE+ +++ PK
Sbjct: 259 SQVVDDFNLMVKNCKKFNGEAAGISKMAMNIQAQFEKLMVKVPPK 303
>gi|189239068|ref|XP_971434.2| PREDICTED: similar to zinc finger protein [Tribolium castaneum]
Length = 1308
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
AWPF+ PV + + + DYY+VI KPMDF TIK K++ + Y+ + AD LVF+N
Sbjct: 1202 AWPFLRPV--QKIEVPDYYDVITKPMDFGTIKYKLNMGE---YKEDAQFMADALLVFQNC 1256
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE 142
YN DDV+ LL F++K +L K+ EE
Sbjct: 1257 NTYNHTEDDVYKCGVQLLRLFQKKCRELGLKLPEE 1291
>gi|169624656|ref|XP_001805733.1| hypothetical protein SNOG_15588 [Phaeosphaeria nodorum SN15]
gi|111055843|gb|EAT76963.1| hypothetical protein SNOG_15588 [Phaeosphaeria nodorum SN15]
Length = 906
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
++PF+ PVD L + Y ++I+KPMDF TI+ + K G Y++ ++ +AD LVF+N
Sbjct: 564 SYPFVSPVDPVALNIPSYLKIIKKPMDFGTIEKNL--KAGM-YQSAKDFHADAHLVFQNC 620
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKW 132
K+N E D V+ M L + FE+ W
Sbjct: 621 YKFNPEGDAVNKMGHDLEDIFEKLW 645
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
F PVD L + Y E+++KPMD ST++NK+ Y VRE AD+ + +N+ +
Sbjct: 362 FKDPVDHIALNIPTYPELVKKPMDLSTMENKLKENK---YTYVREFMADLDQMIENSELF 418
Query: 111 NDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 152
N+++ V +L F K + +P+ E+ ++ +AK
Sbjct: 419 NNKQHPVTQAGYNLRAYF-LKGMGKMPRGSSAEEPPKQVKAK 459
>gi|14164429|dbj|BAB55682.1| P0047B08.5 [Oryza sativa Japonica Group]
Length = 370
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 22 GCKNLSASLLQFFVRQARSF--ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 79
G + A L +R + + +H+ W F PVD L L DYY I PMD T++
Sbjct: 166 GVAGVPADLGDALLRCGKLLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVR 225
Query: 80 NKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV 139
+++ + Y + ADVRL F NAM YN D V+ A L E FE W P V
Sbjct: 226 RRLERRR---YADPWAFAADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGW----PSV 278
Query: 140 MEEEKRQEEEEAKAQLDMQLTQEAV 164
+ R + E K +L L + V
Sbjct: 279 LAAPPRPPDAERKRRLSGLLPRLPV 303
>gi|392571704|gb|EIW64876.1| Bromodomain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 749
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+ A PF PVD +G+ +Y +V++KPMD +T+K K+D + + RE D RL+
Sbjct: 419 HYTIAHPFYEPVDPVKMGIPEYPKVVKKPMDLATMKKKLDAGEYSTAEKFRE---DFRLM 475
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KN M +N + VH K+L FEEKW L
Sbjct: 476 VKNCMTFNPPGNPVHEAGKALQVLFEEKWKNL 507
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 18 LLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFST 77
L L+ + +F + R+ + + K + PF++PVD LG+ Y +I+ PMDFS+
Sbjct: 191 LPSTSPPTLTPAQWRFCLSTVRT-LKRMKDSGPFLNPVDPVALGIPHYPTIIKHPMDFSS 249
Query: 78 IKNKMDGKDGTG---------YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKF 128
I+ K+ + Y +V +I AD+RL+F N + +N V M K + F
Sbjct: 250 IERKLTTSNPAKPDPNPANPRYGSVDDIVADIRLIFANCLTFNGPDHPVTQMGKRVEAVF 309
Query: 129 EEKWLQL 135
+++ Q+
Sbjct: 310 DKQVKQM 316
>gi|291391605|ref|XP_002712247.1| PREDICTED: bromodomain adjacent to zinc finger domain, 2B
[Oryctolagus cuniculus]
Length = 2168
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2079 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFAVDVRLVF 2133
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 2134 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2161
>gi|165970446|gb|AAI58274.1| LOC100144959 protein [Xenopus (Silurana) tropicalis]
Length = 476
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY++I+ PMD STI+ ++ + Y
Sbjct: 33 LQYLEKVVLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRL---EYNYY 89
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ D +F N YN DD+ VM++ L + F EK ++
Sbjct: 90 SKALDCIQDFNTMFTNCYIYNKPGDDIVVMSQELEKVFMEKIAEM 134
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF V L D + I+ PMD +TI++KM+ +G Y++ ++ +D+RL+F N
Sbjct: 312 YAWPFYK--TVIPTSLLDCSDAIKHPMDLATIRDKME--NGL-YKDTQDFASDIRLMFMN 366
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
+ KYN ++V MA+ + + FE
Sbjct: 367 SYKYNPPDNEVVNMARKMQDVFE 389
>gi|297597282|ref|NP_001043715.2| Os01g0648700 [Oryza sativa Japonica Group]
gi|55296880|dbj|BAD68333.1| PSTVd RNA-biding protein-like [Oryza sativa Japonica Group]
gi|255673505|dbj|BAF05629.2| Os01g0648700 [Oryza sativa Japonica Group]
Length = 238
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 64/145 (44%), Gaps = 9/145 (6%)
Query: 22 GCKNLSASLLQFFVRQARSF--ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 79
G + A L +R + + +H+ W F PVD L L DYY I PMD T++
Sbjct: 41 GVAGVPADLGDALLRCGKLLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVR 100
Query: 80 NKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV 139
+ + Y + ADVRL F NAM YN D V+ A L E FE W P V
Sbjct: 101 RR---LERRRYADPWAFAADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGW----PSV 153
Query: 140 MEEEKRQEEEEAKAQLDMQLTQEAV 164
+ R + E K +L L + V
Sbjct: 154 LAAPPRPPDAERKRRLSGLLPRLPV 178
>gi|255071051|ref|XP_002507607.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226522882|gb|ACO68865.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 433
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD----GTGYRNVREIYADV 100
++ +WPF PVD E G+ DYYEVI+ PMDF TI K D D +G+ ++ + DV
Sbjct: 158 NRLSWPFNEPVDAEYWGVQDYYEVIKTPMDFGTIATKYDIGDYNTENSGHGALKFV-TDV 216
Query: 101 RLVFKNAMKYNDERDDVHVMAKSLLEKFE 129
R VF NA YN V+ A+ L FE
Sbjct: 217 RQVFYNAWTYNQPGHQVYQYAQILARIFE 245
>gi|170284622|gb|AAI61214.1| Unknown (protein for IMAGE:8889270) [Xenopus (Silurana) tropicalis]
Length = 356
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 35 LQYMQNVVVKTLWKHQFAWPFYQPVDCVKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 91
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 92 WSANECMQDFNTMFTNCYIYNKSTDDIVLMAQALEKIFLQKVAQM 136
>gi|321263793|ref|XP_003196614.1| bromodomain transcription initiation factor; Bdf2p [Cryptococcus
gattii WM276]
gi|317463091|gb|ADV24827.1| Bromodomain transcription initiation factor, putative; Bdf2p
[Cryptococcus gattii WM276]
Length = 766
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 93/181 (51%), Gaps = 10/181 (5%)
Query: 31 LQFFVRQARSFITQHKW---AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 87
LQ+ R +S + +K+ PF++PV+ + DY VI +P+DF+ IKNK++
Sbjct: 402 LQWASRAIKSLESSNKYYIAVSPFLYPVEKIIEEVPDYATVIRRPIDFNMIKNKLNE--- 458
Query: 88 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQE 147
Y +V ++ D+RL+ NA K+N +VH A LL+ ++EKW + +P +E E
Sbjct: 459 NSYEDVNQVDEDMRLMVANAQKFNPPGHEVHTSATQLLQIWDEKW-RTVPAKVETRDSSE 517
Query: 148 EEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGT 207
+ A+A D ++ Q + L ++ ++ Q+ LR + ++ ++ K T
Sbjct: 518 DPMAEAFDDYSSDEDNAQL---RSLEGQVIALNQQISALRSKMTKRRAARGSKSKSKPKT 574
Query: 208 A 208
A
Sbjct: 575 A 575
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 17/126 (13%)
Query: 21 GGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKN 80
G L+ + ++ + RS + A+ F+ PVD + Y+ VI+ PMD T++
Sbjct: 202 GPNTPLTLTQHKYMLNAVRSLKKRLPDAYNFLVPVDTVRFNIPHYHTVIDTPMDLGTVET 261
Query: 81 KMDGKDGTG-----------------YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKS 123
K+ D G Y +V E+ DVR +++N+ K+N + V MA
Sbjct: 262 KLIVSDPRGPPKDKSKMSKWDTSKGKYNSVAEVTEDVRRIWENSRKFNGKDHPVSQMATR 321
Query: 124 LLEKFE 129
L E FE
Sbjct: 322 LEEAFE 327
>gi|222618950|gb|EEE55082.1| hypothetical protein OsJ_02819 [Oryza sativa Japonica Group]
Length = 264
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 22 GCKNLSASLLQFFVRQARSF--ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 79
G + A L +R + + +H+ W F PVD L L DYY I PMD T++
Sbjct: 41 GVAGVPADLGDALLRCGKLLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVR 100
Query: 80 NKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV 139
+++ + Y + ADVRL F NAM YN D V+ A L E FE W P V
Sbjct: 101 RRLERRR---YADPWAFAADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGW----PSV 153
Query: 140 MEEEKRQEEEEAKAQLDMQLTQEAV 164
+ R + E K +L L + V
Sbjct: 154 LAAPPRPPDAERKRRLSGLLPRLPV 178
>gi|349577009|dbj|GAA22178.1| K7_Bdf2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 638
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 18/174 (10%)
Query: 49 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK-MDGKDGTGYRNVREIYADVRLVFKNA 107
+PF+ PVD L L +Y++V++ PMD TI N M+ K Y+ + + D+ LVF N
Sbjct: 343 FPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWK----YKTIDQFVDDLNLVFYNC 398
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQ---LLPKV-----MEEEKRQEEEEAKAQLDMQL 159
++N E ++VH M K L E F WL+ +L ++ +EE+ + + D +
Sbjct: 399 FQFNPEGNEVHSMGKKLKELFNFHWLENQDILNEIETDSDLEEDNYSSSYSSDDEYDDED 458
Query: 160 TQEAVQTNKA-KELRSELNEVDMQLENLRETVIQKCRKMSTEEK-KNLGTALTR 211
E TN A + L +L +++++L+ L+ Q+ K+S E K K+LG L R
Sbjct: 459 INENDITNPAIQYLEQKLKKMEVELQQLKR---QELSKLSKERKRKHLGKTLLR 509
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A PF+ PVD L + Y+ ++ PMD S I+ K+ G Y +V ++ +D + +
Sbjct: 153 KDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKL---QGNVYHSVEQVTSDFKTMVD 209
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 140
N + +N + MAK + + FE+K + P+V+
Sbjct: 210 NCLNFNGPESSISSMAKRIQKYFEKKLSAMPPRVL 244
>gi|256274113|gb|EEU09024.1| Bdf2p [Saccharomyces cerevisiae JAY291]
Length = 638
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 18/174 (10%)
Query: 49 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK-MDGKDGTGYRNVREIYADVRLVFKNA 107
+PF+ PVD L L +Y++V++ PMD TI N M+ K Y+ + + D+ LVF N
Sbjct: 343 FPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWK----YKTIDQFVDDLNLVFYNC 398
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQ---LLPKV-----MEEEKRQEEEEAKAQLDMQL 159
++N E ++VH M K L E F WL+ +L ++ +EE+ + + D +
Sbjct: 399 FQFNPEGNEVHSMGKKLKELFNFHWLENQDILNEIETDSDLEEDNYSSSYSSDDEYDDED 458
Query: 160 TQEAVQTNKA-KELRSELNEVDMQLENLRETVIQKCRKMSTEEK-KNLGTALTR 211
E TN A + L +L +++++L+ L+ Q+ K+S E K K+LG L R
Sbjct: 459 INENDITNPAIQYLEQKLKKMEVELQQLKR---QELSKLSKERKRKHLGKTLLR 509
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A PF+ PVD L + Y+ ++ PMD S I+ K+ G Y +V ++ +D + +
Sbjct: 153 KDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKL---QGNVYHSVEQVTSDFKTMVD 209
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 140
N + +N + MAK + + FE+K + P+V+
Sbjct: 210 NCLNFNGPESSISSMAKRIQKYFEKKLSAMPPRVL 244
>gi|159795469|pdb|2RFJ|A Chain A, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein, Testis Specific (Brdt)
gi|159795470|pdb|2RFJ|B Chain B, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein, Testis Specific (Brdt)
gi|159795471|pdb|2RFJ|C Chain C, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein, Testis Specific (Brdt)
gi|394986421|pdb|4FLP|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brdt
In Complex With The Inhibitor Jq1
gi|394986422|pdb|4FLP|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brdt
In Complex With The Inhibitor Jq1
Length = 119
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 14 LQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENK---YY 70
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 71 AKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 115
>gi|348585937|ref|XP_003478727.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
isoform 2 [Cavia porcellus]
Length = 2198
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2109 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSNGQ---YPNLETFAVDVRLVF 2163
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 2164 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2191
>gi|1749522|dbj|BAA13819.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 361
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Query: 44 QHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRL 102
QH+ +A+PF PV+ G DY++VI+ PMD T++NK++ + Y +++ AD+ L
Sbjct: 56 QHEAYAYPFYKPVNPTACGCPDYFKVIKHPMDLGTMQNKLNHNE---YASMKAFEADMVL 112
Query: 103 VFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
+FKN K+N VH+M K L F++ W
Sbjct: 113 MFKNCYKFNSAGTPVHLMGKKLESIFQKLW 142
>gi|348585935|ref|XP_003478726.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
isoform 1 [Cavia porcellus]
Length = 2170
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2081 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSNGQ---YPNLETFAVDVRLVF 2135
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 2136 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2163
>gi|351711943|gb|EHB14862.1| Bromodomain adjacent to zinc finger domain protein 2B [Heterocephalus
glaber]
Length = 2168
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2079 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSNGQ---YPNLETFAVDVRLVF 2133
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 2134 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2161
>gi|431894841|gb|ELK04634.1| Bromodomain adjacent to zinc finger domain protein 2B [Pteropus
alecto]
Length = 2135
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2046 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLESFALDVRLVF 2100
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 2101 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2128
>gi|393244892|gb|EJD52403.1| hypothetical protein AURDEDRAFT_55704 [Auricularia delicata
TFB-10046 SS5]
Length = 391
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 6/90 (6%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
HK AWPF+HPV+ E + DYY+VI+ PMDFS +++K++ Y + + AD +L+F
Sbjct: 302 HKMAWPFLHPVNREEVV--DYYDVIKNPMDFSLMEHKLEHHR---YSTIDDFVADCQLIF 356
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
N + YN E + ++V ++ KF E LQ
Sbjct: 357 SNCLTYNPE-NTIYVKCALVMRKFVETQLQ 385
>gi|344268059|ref|XP_003405881.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Loxodonta africana]
Length = 2169
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2080 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVF 2134
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 2135 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2162
>gi|329664076|ref|NP_001192347.1| bromodomain adjacent to zinc finger domain protein 2B [Bos taurus]
gi|296490606|tpg|DAA32719.1| TPA: bromodomain adjacent to zinc finger domain, 2B [Bos taurus]
Length = 2167
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2078 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVF 2132
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 2133 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2160
>gi|440898818|gb|ELR50241.1| Bromodomain adjacent to zinc finger domain protein 2B [Bos grunniens
mutus]
Length = 2166
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2077 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVF 2131
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 2132 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2159
>gi|326680215|ref|XP_002666866.2| PREDICTED: cat eye syndrome critical region protein 2 [Danio rerio]
Length = 936
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
HK AWPFM PVD E +Y+E+I+ PMD STI+ K++ DG Y E ADV+L+F
Sbjct: 417 HKDAWPFMEPVD-ESYAP-NYHEIIQTPMDLSTIERKLN--DGE-YLAKDEFVADVKLMF 471
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
N ++YN E + +MA+SL F L+ P
Sbjct: 472 GNCLEYNGEESEYTIMAESLERCFTRALLKHFP 504
>gi|440632694|gb|ELR02613.1| hypothetical protein GMDG_05576 [Geomyces destructans 20631-21]
Length = 895
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 50 PFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMK 109
PF+ PVD LG+ +Y+++++ PMD STI + ++ Y N ++ AD+RL+FKN K
Sbjct: 549 PFLIPVDPVALGIPEYFKIVKSPMDLSTITDNLNSGH---YANSKDFEADIRLMFKNCYK 605
Query: 110 YNDERDDVHVMAKSLLEKFEEKW 132
+N V+VM + L F +W
Sbjct: 606 FNPPSTAVNVMGQELEAFFNSEW 628
>gi|224129398|ref|XP_002328707.1| bromodomain protein [Populus trichocarpa]
gi|222839005|gb|EEE77356.1| bromodomain protein [Populus trichocarpa]
Length = 302
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
F PVD LGLHDY+ V++ PMDF TI + ++G Y N ++Y DV+ +++N +KY
Sbjct: 173 FNSPVDPASLGLHDYFAVVDTPMDFGTICKNL--QNGVKYLNGEDVYKDVQYIWENCLKY 230
Query: 111 NDERDDVHVMAKSLLEKFEEKW 132
N + D + + K + +KF + W
Sbjct: 231 NKKGDYIVYLMKRVKKKFMKYW 252
>gi|426221047|ref|XP_004004723.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Ovis aries]
Length = 2167
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2078 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVF 2132
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 2133 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2160
>gi|432876083|ref|XP_004072968.1| PREDICTED: bromodomain-containing protein 3-like [Oryzias latipes]
Length = 494
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY++VI+ PMD TIK ++ + Y
Sbjct: 36 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLCLWDYHKVIKNPMDMGTIKKRL---ENNYY 92
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 93 WSASEAMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 137
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 76 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
S + KMD + Y + + DVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 171 SILPKKMDKSE---YSDPQSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKI 227
>gi|395846680|ref|XP_003796028.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Otolemur garnettii]
Length = 2146
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2057 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVF 2111
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 2112 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2139
>gi|224056313|ref|XP_002187748.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Taeniopygia guttata]
Length = 2125
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI++K+ Y N+ DVRLVF
Sbjct: 2036 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIRDKLSSGQ---YPNLEAFSLDVRLVF 2090
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
N +N++ D+ ++ + FE+KW ++
Sbjct: 2091 DNCETFNEDDSDIGRAGHNMRKYFEKKWTEIF 2122
>gi|50303459|ref|XP_451671.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640803|emb|CAH02064.1| KLLA0B03113p [Kluyveromyces lactis]
Length = 661
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 21/162 (12%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+ +PF+ PVD L Y++ +++PMD T++ K++ + Y+ E DVRLVFKN
Sbjct: 300 FNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWE---YQTSEEFEHDVRLVFKN 356
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQE-----------EEEAKAQL 155
+N E V++M L + F KW P + EEE E E + Q+
Sbjct: 357 CYAFNPEGTIVNMMGHRLEDVFNSKWAD-RPVIPEEESADEGGESEDGYESDEPSEEEQI 415
Query: 156 D-MQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK 196
D Q+T A+Q L +L + ++L+ L++ + + RK
Sbjct: 416 DETQITNPAIQY-----LEQQLERMKIELQQLKKQELDRIRK 452
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A PF PVD L + Y+ I +PMD STI+ K+ + Y ++ D L+
Sbjct: 134 KDAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKL---NLDAYETPEQVTDDFNLMVS 190
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
N +K+N ++ + MA+++ FE+ L +
Sbjct: 191 NCIKFNGDKAVISQMARNIQASFEKHMLNM 220
>gi|344301621|gb|EGW31926.1| hypothetical protein SPAPADRAFT_61027 [Spathaspora passalidarum
NRRL Y-27907]
Length = 330
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+ + +PF+ PVD L + +Y EV+++PMD TI+ K+ Y N E DVRLV
Sbjct: 5 HYNYNFPFLSPVDTVALNIPNYNEVVKEPMDLGTIQTKLAN---NQYENGDEFEHDVRLV 61
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
FKN +N E DV++M L F++KW
Sbjct: 62 FKNCYLFNPEGTDVNMMGHRLEAVFDKKW 90
>gi|62945212|dbj|BAD97681.1| open reading frame X [Mus musculus]
Length = 387
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK +++ Y
Sbjct: 38 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNY---Y 94
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 95 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 139
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 79
+AWPF PVD E L LHDY+++I+ PMD ST+K
Sbjct: 329 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVK 361
>gi|145534263|ref|XP_001452876.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420575|emb|CAK85479.1| unnamed protein product [Paramecium tetraurelia]
Length = 468
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 6/92 (6%)
Query: 36 RQARSFITQ---HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 92
+QA+ I Q K A+ F PVD + + DY+E+++KPMDF TIKNK+ + Y+N
Sbjct: 363 KQAKKIIAQIWKAKGAYFFHKPVDQKEFHITDYFEIVKKPMDFGTIKNKL---NVNAYKN 419
Query: 93 VREIYADVRLVFKNAMKYNDERDDVHVMAKSL 124
RE +AD+ LVF N + YN + + + S+
Sbjct: 420 FREFHADMLLVFDNCVLYNGNQSAIGQIGVSI 451
>gi|300175329|emb|CBK20640.2| unnamed protein product [Blastocystis hominis]
Length = 249
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM-DGKDGTGYRNVREIYADVRLVF 104
K+A PF+HPVD L + DY+++I+ PMDF TI ++ +G+ T V+ + LVF
Sbjct: 110 KFASPFLHPVDPVALNIPDYFDIIKNPMDFGTIYQRLINGQITTEAEYVKLM----ELVF 165
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
NA+ YN +DDV MA L F++++ Q+
Sbjct: 166 TNAITYNKPQDDVAFMAHELQAYFDKEYTQM 196
>gi|403363335|gb|EJY81411.1| Bromodomain containing protein [Oxytricha trifallax]
Length = 726
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
+W F PVD E LG+ DY+ +I PMDF TIK ++ + Y ++E D++LVF N
Sbjct: 635 SWIFHEPVDPERLGVPDYFNIIRNPMDFGTIKQRL---NTNYYHRMQEFLDDMQLVFDNC 691
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+K+N E +++ + K + E+F+ + QL
Sbjct: 692 LKFNGEENNIGKICKIVREEFKRLYEQL 719
>gi|355671954|gb|AER94962.1| bromodomain adjacent to zinc finger domain, 2B [Mustela putorius
furo]
Length = 950
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 862 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFAVDVRLVF 916
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
N +N++ D+ S+ + FE+KW +
Sbjct: 917 DNCETFNEDDSDIGRAGHSMRKYFEKKWTDIF 948
>gi|397640630|gb|EJK74224.1| hypothetical protein THAOC_04109 [Thalassiosira oceanica]
Length = 824
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +H+ W F VD LGL DY++VIE PMD S ++ K+ K G Y++ +DV+
Sbjct: 731 MIEHENGWLFKDAVDPVELGLVDYFDVIETPMDLSLVEKKL--KQGC-YKSEAMFESDVK 787
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
LVF NA+ +N E DV V+AK +L F + L+
Sbjct: 788 LVFNNAIVFNGEESDVGVIAKEMLGLFSSHFKNLI 822
>gi|444514374|gb|ELV10566.1| Bromodomain adjacent to zinc finger domain protein 2B [Tupaia
chinensis]
Length = 1028
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 939 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVF 993
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 994 DNCETFNEDDSDIGRAGHSMRKYFEKKW 1021
>gi|402592712|gb|EJW86639.1| bromodomain containing protein [Wuchereria bancrofti]
Length = 533
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 5/89 (5%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
AWPF+ PVD + + DYY++I++PMD TI NK+ + Y ++ AD RL+F+N
Sbjct: 439 AWPFLKPVDAKAVP--DYYQIIKRPMDLRTIMNKLKQR---LYDTPDQVIADARLIFENC 493
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
YN+E +++ A L + EE++ ++L
Sbjct: 494 RIYNEEESEIYKCANKLEQFMEERFSKIL 522
>gi|299471129|emb|CBN78987.1| ankyrin repeat-containing protein [Ectocarpus siliculosus]
Length = 732
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 51 FMHPVDVEGLGLHDYY-EVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMK 109
F +PV GL Y +VI+ PMD T+ ++D K YR R+ ADVRLVF NA
Sbjct: 234 FQYPVPPNFRGLRGMYADVIKSPMDLGTVMKRIDSK----YRTARDCIADVRLVFSNAKD 289
Query: 110 YNDERDDVHVMAKSLLEKFE 129
+N + D VH +A SL KFE
Sbjct: 290 FNPDTDPVHALAASLSGKFE 309
>gi|409051415|gb|EKM60891.1| hypothetical protein PHACADRAFT_247110 [Phanerochaete carnosa
HHB-10118-sp]
Length = 783
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 117/276 (42%), Gaps = 55/276 (19%)
Query: 31 LQFFVRQARSFITQHKW--AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGT 88
L+F + R + W A PF PVD L + Y ++I+KPMD ST++ K+D +
Sbjct: 427 LKFCDKVLRDLNKKTHWNIAHPFYEPVDWVKLEIPSYPKLIKKPMDLSTMRRKLDNSE-- 484
Query: 89 GYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEE 148
Y +E D +L+ +N +N V+ + L + F+EKW L P E E+
Sbjct: 485 -YSTPKEFNDDFKLIIRNCFTFNPAGTPVNTAGQELQQLFDEKWKNLPPLRRTPESDDED 543
Query: 149 EEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRE-------------------- 188
+E +A D +LT V T K EL S+L ++ L +L++
Sbjct: 544 DEDEADSDDELT---VITGKITELESQLESMNRALVSLKQKREKLIKEKKKAIEKRPPPP 600
Query: 189 ---------------TVIQKCRK------------MSTEEKKNLGTALTRLSPEDLCKAL 221
T RK +S E+KK L + +L + L K +
Sbjct: 601 PVASTSKSTPKTNGKTAPPVNRKKPSKKPIEDNDVLSFEQKKELSDTIGKLDGQKLEKVI 660
Query: 222 EIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 257
+I+ E P + +E++L++D L +L FV
Sbjct: 661 QIIHEGVPEIRDSTEEIELEIDTLPAAVLTKLYNFV 696
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 10/123 (8%)
Query: 22 GCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 81
G S +F V R+ + + K A PF+ PVDV L + Y +++++PMDFSTI+ K
Sbjct: 221 GPSTFSVPQHRFCVSTIRT-LKKMKAAAPFLKPVDVVALNIPHYPQIVKQPMDFSTIERK 279
Query: 82 MDG---------KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
+ Y + E ADVRL+F N + +N + ++K + E F+++
Sbjct: 280 LQSSTPQKSDPNPSNPRYHHADEFIADVRLIFSNCLAFNGTDHFITQLSKQVEEVFDKQL 339
Query: 133 LQL 135
L
Sbjct: 340 KNL 342
>gi|344245482|gb|EGW01586.1| Bromodomain adjacent to zinc finger domain protein 2B [Cricetulus
griseus]
Length = 1853
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K++ Y N DVRLVF
Sbjct: 1764 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLNNGQ---YTNFETFALDVRLVF 1818
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 1819 DNCETFNEDDSDIGRAGHSMRKYFEKKW 1846
>gi|145539752|ref|XP_001455566.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423374|emb|CAK88169.1| unnamed protein product [Paramecium tetraurelia]
Length = 497
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 36 RQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 95
++ I + K A F PVD + G+ DYYE++ KPMDF T+KNK+ + Y +E
Sbjct: 395 KKVLGIIWKAKGAHLFHQPVDQKKYGISDYYEIVTKPMDFGTVKNKL---NSNVYSACQE 451
Query: 96 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW-LQLLPKVM 140
Y DV VF+N + YN E +V + ++ ++FE + L LL K +
Sbjct: 452 FYDDVMQVFENCILYNGETSEVGQIGLNIKQEFENQLELTLLKKYL 497
>gi|301779808|ref|XP_002925321.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Ailuropoda melanoleuca]
Length = 2169
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2080 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFAVDVRLVF 2134
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
N +N++ D+ ++ + FE+KW +
Sbjct: 2135 DNCETFNEDDSDIGRAGHNMRKYFEKKWTDIF 2166
>gi|145549930|ref|XP_001460644.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428474|emb|CAK93247.1| unnamed protein product [Paramecium tetraurelia]
Length = 503
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A F +PVD + G++DYY+++++PMDF T+K K++ Y+N +E Y+D+ LVF
Sbjct: 410 KGAQLFHNPVDEKKYGINDYYDIVKRPMDFGTVKQKLNTNQ---YKNCKEFYSDILLVFD 466
Query: 106 NAMKYNDERDDVHVMAKSLLEKF 128
N + YN +D+ + +L ++F
Sbjct: 467 NCVLYNGSENDIGQIGLALKQEF 489
>gi|354476573|ref|XP_003500499.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Cricetulus griseus]
Length = 2117
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K++ Y N DVRLVF
Sbjct: 2028 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLNNGQ---YTNFETFALDVRLVF 2082
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 2083 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2110
>gi|115391367|ref|XP_001213188.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114194112|gb|EAU35812.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 816
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+ +A PF +PVD L + Y+ +I+KPMD ST+++K+ K G Y N +E D+R +
Sbjct: 479 HYAYAMPFYYPVDPVALNIPTYHSIIKKPMDLSTMQSKL--KTGQ-YENAKEFETDMRQM 535
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
FKN K+N D V + L F KW +
Sbjct: 536 FKNCFKFNIPGDPTFVAGQQLEAVFNAKWAE 566
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 110
+ PVD + + Y ++I +PMD TI+ K+ Y+ V+ + D L+ +NA+ +
Sbjct: 291 YREPVDPIKMNIPHYPQIITRPMDLGTIERKLKNNQ---YKTVQGVVDDFSLMVQNAVTF 347
Query: 111 NDERDDVHVMAKSLLEKFEEKWLQLL-PKVMEEEK 144
N V + L FE++ + L P +EE+K
Sbjct: 348 NGPDHLVSQEGQRLKATFEKQMVNLPKPDEVEEKK 382
>gi|397641904|gb|EJK74909.1| hypothetical protein THAOC_03385, partial [Thalassiosira oceanica]
Length = 273
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 5/88 (5%)
Query: 50 PFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM-DGKDGTGYRNVREIYADVRLVFKNAM 108
PF VD + LGL DY ++I+ PMD T+K K+ +GK Y+++ E DVR ++KN M
Sbjct: 92 PFREAVDWKTLGLFDYPQIIKHPMDLGTVKRKINEGK----YKSLHEAGDDVRQIWKNCM 147
Query: 109 KYNDERDDVHVMAKSLLEKFEEKWLQLL 136
YN + D + +A+S+ +KFE+K+ +LL
Sbjct: 148 TYNADGSDFYNLAESMAKKFEDKFQKLL 175
>gi|196014713|ref|XP_002117215.1| hypothetical protein TRIADDRAFT_61269 [Trichoplax adhaerens]
gi|190580180|gb|EDV20265.1| hypothetical protein TRIADDRAFT_61269 [Trichoplax adhaerens]
Length = 1478
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +H+ +WPF+ PVD + DYYE+++ PMDF TIK K+ Y++ RE DVR
Sbjct: 1368 LEEHRDSWPFLQPVDKNKVP--DYYEIVKNPMDFQTIKKKL---SSIRYKDPREFATDVR 1422
Query: 102 LVFKNAMKYNDER 114
LVF N +YN+ R
Sbjct: 1423 LVFINCAEYNNPR 1435
>gi|426225993|ref|XP_004007141.1| PREDICTED: uncharacterized protein LOC101109872 [Ovis aries]
Length = 589
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK +++ Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNY---Y 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 77 TIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
++ KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 331 VLQKKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 386
>gi|157823119|ref|NP_001101730.1| bromodomain adjacent to zinc finger domain protein 2B [Rattus
norvegicus]
gi|149047773|gb|EDM00389.1| bromodomain adjacent to zinc finger domain, 2B (predicted) [Rattus
norvegicus]
Length = 2191
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K++ Y N DVRLVF
Sbjct: 2102 HEDAWPFLLPVNLKLV--PGYRKVIKKPMDFSTIREKLNNGQ---YPNFETFALDVRLVF 2156
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 2157 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2184
>gi|281337460|gb|EFB13044.1| hypothetical protein PANDA_014792 [Ailuropoda melanoleuca]
Length = 2122
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2033 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFAVDVRLVF 2087
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
N +N++ D+ ++ + FE+KW +
Sbjct: 2088 DNCETFNEDDSDIGRAGHNMRKYFEKKWTDIF 2119
>gi|307103867|gb|EFN52124.1| hypothetical protein CHLNCDRAFT_27193 [Chlorella variabilis]
Length = 88
Score = 70.5 bits (171), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/78 (48%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKN 106
+WPF PVD+ DY E + +PMDF TIK ++D G YR+ E +DVRLVF N
Sbjct: 1 SWPFNAPVDLRQYP--DYAETVSRPMDFGTIKRRID----VGLYRHPDEFLSDVRLVFDN 54
Query: 107 AMKYNDERDDVHVMAKSL 124
A YN DVHVMA +L
Sbjct: 55 ARLYNKPGSDVHVMANTL 72
>gi|417406918|gb|JAA50099.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2172
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N DVRLVF
Sbjct: 2083 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YLNPESFALDVRLVF 2137
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 2138 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2165
>gi|449670051|ref|XP_002170910.2| PREDICTED: uncharacterized protein LOC100207323 [Hydra
magnipapillata]
Length = 637
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 77/142 (54%), Gaps = 19/142 (13%)
Query: 34 FVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 93
+Q S + H+ AWPF+ PV+ + +YY+VI+ PMDF TI+NK+ Y+N
Sbjct: 483 LCKQILSEMDSHEHAWPFLVPVNNKQFP--EYYQVIKHPMDFQTIENKLRENQ---YKNR 537
Query: 94 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKA 153
+ D RLVFKN +N++ +V K + FE++WL+L +K+Q
Sbjct: 538 EDFAKDTRLVFKNCNIFNEDFSEVGKAGKIMSRFFEKRWLELC----SGDKKQH------ 587
Query: 154 QLDMQLTQEAVQTNKAKELRSE 175
Q+T++ +N++++L +E
Sbjct: 588 ----QVTKKEKTSNESRKLHTE 605
>gi|159155373|gb|AAI54472.1| LOC799918 protein [Danio rerio]
Length = 706
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
HK AWPFM PVD +Y+E+I+ PMD STI+ K++ DG Y E ADV+L+F
Sbjct: 418 HKDAWPFMEPVDESYAP--NYHEIIQTPMDLSTIERKLN--DGE-YLAKDEFVADVKLMF 472
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
N ++YN E + +MA+SL F L+ P
Sbjct: 473 GNCLEYNGEESEYTIMAESLERCFTRALLKHFP 505
>gi|366999172|ref|XP_003684322.1| hypothetical protein TPHA_0B02160 [Tetrapisispora phaffii CBS 4417]
gi|357522618|emb|CCE61888.1| hypothetical protein TPHA_0B02160 [Tetrapisispora phaffii CBS 4417]
Length = 690
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 55/261 (21%)
Query: 42 ITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 98
+T K+A +PF+ PVD + + Y++ ++ PMD ST+ K++ + Y+++ E +
Sbjct: 335 LTSKKYASFNYPFLEPVDPVAMNIPTYFDYVKDPMDLSTVTKKLNNWE---YKSLEEFES 391
Query: 99 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEE---EEAKA-- 153
DV+LVF N +N + V++M L E F KW+ + E+ EE EE A
Sbjct: 392 DVKLVFHNCYAFNPDGTIVNMMGHRLEEIFNAKWVDR--PIFEDYDTDEEIEREEYSASD 449
Query: 154 ----QLDMQLTQEAVQTNKA-KELRSELNEVDMQLENLRETVIQKCRK------------ 196
+ E+ TN A + + +L + ++L+ L++ + K RK
Sbjct: 450 VEDSEESESEIDESSITNPAIQYIEEQLARMKVELQQLKKQELDKIRKERRLARGTKKPR 509
Query: 197 ------------------------MSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFH 232
++ E KK + + LSP L KA+ I+ ++ P
Sbjct: 510 GKRGRNKSRGSSGSRSGKKKFKTVVTYEMKKIITEKINDLSPSKLEKAVNIIKKSMPDL- 568
Query: 233 ATAQEVDLDMDAQSELTLWRL 253
EV+LD+D S TL L
Sbjct: 569 GEDDEVELDLDTLSNSTLLTL 589
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A PF+ PVD L + YY I++PMD TI+ K+ Y + +I D L+ +
Sbjct: 176 KDAKPFLLPVDPVALNIPHYYNKIQRPMDLMTIEKKLTVD---AYDSPEKITEDFNLMVQ 232
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK----VMEEEKRQEEEEA 151
N + +N + MA+++ +E+ L + K + + KR+++E+A
Sbjct: 233 NCIVFNGPTSGIAQMARNIQAAYEKHMLNMPSKDSEPLKQTRKRKQDEDA 282
>gi|170086133|ref|XP_001874290.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651842|gb|EDR16082.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 573
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 25 NLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 84
NLS + +F RS + + K A PF+ PVDV GL + Y +I+ PMDFSTI+ K++
Sbjct: 21 NLSIAQFRFCQSTIRS-LKKQKDAAPFLRPVDVIGLNIPHYPSIIKTPMDFSTIERKLNS 79
Query: 85 KDGTG---------YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ Y N E DVRL+F+N + +N + M K + F+++ Q+
Sbjct: 80 SNPAKPDLNLQNPRYHNADEFIFDVRLIFQNCITFNGPDHAIAAMGKRVEAVFDKQVKQM 139
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 11/138 (7%)
Query: 3 LALRSSSKMHFIGKKLLEGGCK---NLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEG 59
L + K H GK++ + G A +LQ R+ + A PF PVD
Sbjct: 200 LPYADAPKKHRKGKRVKDDGTAEQLKFCAKILQDLHRK-----QHYGIAHPFYEPVDWVK 254
Query: 60 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 119
L + Y +V++KPMD STI+ K++ + Y ++ + D +L+ +N +N V+
Sbjct: 255 LDIPSYPKVVKKPMDLSTIRKKLENFE---YSTAQKFFDDFKLMIRNCFLFNPAGTLVNQ 311
Query: 120 MAKSLLEKFEEKWLQLLP 137
L F+EKW L P
Sbjct: 312 AGIELQRLFDEKWKSLPP 329
>gi|417414064|gb|JAA53334.1| Putative chromatin remodeling complex wstf-iswi large subunit,
partial [Desmodus rotundus]
Length = 2092
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N DVRLVF
Sbjct: 2003 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YLNPESFALDVRLVF 2057
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 2058 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2085
>gi|417406914|gb|JAA50097.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2143
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N DVRLVF
Sbjct: 2054 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YLNPESFALDVRLVF 2108
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 2109 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2136
>gi|417406931|gb|JAA50104.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2206
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N DVRLVF
Sbjct: 2117 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YLNPESFALDVRLVF 2171
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 2172 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2199
>gi|224007327|ref|XP_002292623.1| hypothetical protein THAPSDRAFT_269496 [Thalassiosira pseudonana
CCMP1335]
gi|220971485|gb|EED89819.1| hypothetical protein THAPSDRAFT_269496 [Thalassiosira pseudonana
CCMP1335]
Length = 865
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ W F PVD LG+ DY+++++ PMD + ++ K++ +G Y+++ D +LVF
Sbjct: 64 HEHGWVFKDPVDPVELGIPDYFDIVQHPMDLALVETKLE--NGV-YKDLDSFERDTKLVF 120
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEE 130
+NA+ +N E++DV MAK LL F+E
Sbjct: 121 ENAILFNGEKNDVGGMAKQLLFMFDE 146
>gi|126326221|ref|XP_001366439.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Monodelphis domestica]
Length = 2180
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2091 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YSNLETFALDVRLVF 2145
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ ++ + FE+KW
Sbjct: 2146 DNCETFNEDDSDIGRAGHNMRKYFEKKW 2173
>gi|417406892|gb|JAA50086.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2074
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N DVRLVF
Sbjct: 1985 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YLNPESFALDVRLVF 2039
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 2040 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2067
>gi|378755920|gb|EHY65945.1| hypothetical protein NERG_00641 [Nematocida sp. 1 ERTm2]
Length = 364
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 74/134 (55%), Gaps = 14/134 (10%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
A PF++PVD + L + DYYE I++PMD ST+ K+ D Y++ E+ AD+ L+ N
Sbjct: 35 AGPFLYPVDPQRLNIPDYYEKIKEPMDLSTVSKKL---DANVYKSTDELKADINLMLSNC 91
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEA--KAQLDMQLTQEAVQ 165
YN V M ++L E+ + QLL K KR+ EEEA K ++ +T+E
Sbjct: 92 YTYNQSDTAVCKMGQAL----EKYFKQLLQKGALVRKRKGEEEAEKKRKVKTDMTEEEY- 146
Query: 166 TNKAKELRSELNEV 179
AK L S LNE+
Sbjct: 147 ---AKCLES-LNEI 156
>gi|417406880|gb|JAA50080.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2045
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N DVRLVF
Sbjct: 1956 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YLNPESFALDVRLVF 2010
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 2011 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2038
>gi|119631811|gb|EAX11406.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_c [Homo
sapiens]
Length = 2231
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2114 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVF 2168
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLT 160
N +N++ D+ ++ + FE+KW + E+ + A QLT
Sbjct: 2169 DNCETFNEDDSDIGRAGHNMRKYFEKKWTDTFKPLCYEDALAAQPYGAANSYHQLT 2224
>gi|417406856|gb|JAA50069.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2011
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N DVRLVF
Sbjct: 1922 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YLNPESFALDVRLVF 1976
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 1977 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2004
>gi|195489088|ref|XP_002092589.1| GE11582 [Drosophila yakuba]
gi|194178690|gb|EDW92301.1| GE11582 [Drosophila yakuba]
Length = 257
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
AW F P+D + LGLHDY+E++ +PMD ST+++++ + Y + D+RL+F N
Sbjct: 32 AWVFYEPLDAQLLGLHDYHEIVREPMDLSTVRHRL---NTACYLTAADFAKDMRLIFYNT 88
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQL 135
Y + + MAK L FEE + Q+
Sbjct: 89 YLYTNPGHLCYHMAKQLQIIFEEMYAQV 116
>gi|417406900|gb|JAA50090.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2108
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N DVRLVF
Sbjct: 2019 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YLNPESFALDVRLVF 2073
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 2074 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2101
>gi|401840059|gb|EJT42981.1| BDF1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 695
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+ +PF+ PVD + L Y++ +++PMD TI K++ + Y+ + + DVRLVFKN
Sbjct: 345 YNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWE---YQTMEDFERDVRLVFKN 401
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME----EEKRQEE--EEAKAQLDMQLT 160
K+N + V++M L E F KW P + E E+ R + E+ +++
Sbjct: 402 CYKFNPDGTIVNMMGHRLEEVFNSKWAD-RPNLDEYDSDEDSRNQGDYEDYESEYSESDI 460
Query: 161 QEAVQTNKA-KELRSELNEVDMQLENLRETVIQKCRK 196
E + TN A + L +L + ++L+ L++ ++K RK
Sbjct: 461 DETIITNPAIQYLEEQLARMKVELQQLKKQELEKIRK 497
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A PF+ PVD L + Y+ +++PMD STI+ K+ + Y +I D L+
Sbjct: 177 KDARPFLQPVDPVKLDIPFYFNYVKRPMDLSTIERKL---NVGAYEFPEQITEDFNLMVN 233
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK----VMEEEKRQEEEEAKAQLDMQLTQ 161
N++++N + MA+++ FE+ L + K V+ + +R + AQ D +
Sbjct: 234 NSIRFNGPNAGISQMARNIQASFEKHMLNMPAKDAAPVVAKGRR-----SSAQEDAPIVI 288
Query: 162 EAVQTNKAKELRS 174
QT+ + R+
Sbjct: 289 RRAQTHNGRPKRT 301
>gi|315043062|ref|XP_003170907.1| bromodomain containing protein [Arthroderma gypseum CBS 118893]
gi|311344696|gb|EFR03899.1| bromodomain containing protein [Arthroderma gypseum CBS 118893]
Length = 911
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKNAMK 109
F PVD L + Y+ VI+KPMD T+K+K+ TG Y N +E AD+R +FKN K
Sbjct: 574 FYDPVDPVALNIPTYHNVIKKPMDLGTMKSKL----ATGQYENAKEFEADMRQIFKNCYK 629
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQ 134
+N D V+ K E F+ KW Q
Sbjct: 630 FNIVGDPVYTAGKQTEEIFDRKWSQ 654
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 24 KNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 83
++++ + L+FF R ++ + + A F PVD+ L + Y++ +++PMD T++ K+
Sbjct: 336 QDMTKAQLKFFTRTFQN-LKRLSDAQMFKFPVDIVKLNIPTYFDFVKQPMDLQTMEGKLK 394
Query: 84 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 129
+ YR ++I D +L+ N+ +N V + L E F+
Sbjct: 395 SET---YRTPQDIIDDFKLMVNNSKVFNGPAHVVSLAGDRLYENFQ 437
>gi|24659254|ref|NP_726307.1| CG30417 [Drosophila melanogaster]
gi|7291557|gb|AAF46981.1| CG30417 [Drosophila melanogaster]
gi|66571202|gb|AAY51566.1| IP01291p [Drosophila melanogaster]
gi|220943344|gb|ACL84215.1| CG30417-PA [synthetic construct]
gi|220953316|gb|ACL89201.1| CG30417-PA [synthetic construct]
Length = 268
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 39 RSFITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREI 96
R F + +K AW F P+D + LGLHDY+E++ +PMD ST++++++ TG Y + +
Sbjct: 23 RLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLN----TGCYLSAADF 78
Query: 97 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
D+RL+F N Y + + MAK L FEE + Q+
Sbjct: 79 AKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFEEMYSQV 117
>gi|392574685|gb|EIW67820.1| hypothetical protein TREMEDRAFT_39966 [Tremella mesenterica DSM 1558]
Length = 1243
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 10/164 (6%)
Query: 31 LQFFVRQARSFITQHKW---AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 87
LQ+ V+ ++ + +K PF+ PVD L +Y +VI+KP+D IK K+D DG
Sbjct: 899 LQWVVKTLKTLESTNKHYNAVSPFLFPVDQIIADLPEYAKVIKKPIDLHIIKAKLD--DG 956
Query: 88 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKR 145
Y +V E+ AD++L+ +NA YN VH A+ L +EEKW L PKV R
Sbjct: 957 V-YEDVSEVNADMKLMIRNATTYNPPNHAVHTAAQQLQRLWEEKWRGLPPKVDPAAAAPR 1015
Query: 146 QEEEEAKAQLDMQLTQEAVQTNKAK--ELRSELNEVDMQLENLR 187
+ + D A+Q +A+ ELR E+ ++ ++ +++
Sbjct: 1016 DTPSDLLDEDDGDDDDAALQQKQARLAELRKEMTVLEKEIADIQ 1059
Score = 46.6 bits (109), Expect = 0.017, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 18/104 (17%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-----------------YRNV 93
F+ PVD G+ Y++VI KPMD +T++ K+ D G Y +V
Sbjct: 724 FLEPVDPIKYGIPTYFQVIAKPMDLATVETKLIVSDPRGPPKDKSKMSKWDTSKGTYGSV 783
Query: 94 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
E+ DVR +++N +N V + A L E EK L+ LP
Sbjct: 784 SEVVDDVRQIWENTRMFNGPTHVVSLAADKLEESL-EKALRNLP 826
>gi|345328056|ref|XP_001512551.2| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
isoform 1 [Ornithorhynchus anatinus]
Length = 2183
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2094 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVF 2148
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
N +N++ D+ ++ + FE+KW +
Sbjct: 2149 DNCETFNEDDSDIGRAGHNMRKYFEKKWTDIF 2180
>gi|171683335|ref|XP_001906610.1| hypothetical protein [Podospora anserina S mat+]
gi|170941627|emb|CAP67281.1| unnamed protein product [Podospora anserina S mat+]
Length = 462
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Query: 50 PFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMK 109
PF PVD + G+ DY+ V++KPMD +T+KNKMD K+ Y + +E AD+ +F N +
Sbjct: 367 PFKDPVDPQRDGVPDYFNVVKKPMDLTTMKNKMDNKE---YNDEQEFLADMNQIFANCYE 423
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQL 135
Y +E D + A+ L + FE+K+ Q+
Sbjct: 424 YWNETDPMWGAAEKLQKSFEDKFSQM 449
>gi|345328058|ref|XP_003431230.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
isoform 2 [Ornithorhynchus anatinus]
Length = 2128
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2039 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVF 2093
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
N +N++ D+ ++ + FE+KW +
Sbjct: 2094 DNCETFNEDDSDIGRAGHNMRKYFEKKWTDIF 2125
>gi|326487788|dbj|BAK05566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 193
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 22/118 (18%)
Query: 23 CKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM 82
C+N+ L+ H W F VD + G+ DY++VI PMD T+K K+
Sbjct: 84 CRNILGKLMD------------HPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKL 131
Query: 83 DGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSL-------LEKFEEKWL 133
K Y + + ADVRL F NAM YN VH +A+ L +E KW+
Sbjct: 132 TNKS---YLSTDDFAADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLEWTSYERKWI 186
>gi|297264141|ref|XP_002808049.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B-like [Macaca mulatta]
Length = 2188
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2071 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVF 2125
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAV 164
N +N++ D+ ++ + FE+KW + E+ + A QLT
Sbjct: 2126 DNCETFNEDDSDIGRAGHNMRKYFEKKWTDTFKPLCYEDALAAKPYGAANSYHQLTSPVT 2185
Query: 165 QTN 167
+ +
Sbjct: 2186 EAS 2188
>gi|296195054|ref|XP_002745280.1| PREDICTED: bromodomain-containing protein 3 [Callithrix jacchus]
Length = 667
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 12/123 (9%)
Query: 15 GKKLLEGGCKNLSASLLQFFVRQARSFITQH--KWAWPFMHPVDVEGLGLHDYYEVIEKP 72
G+ G K + L+ R R ++++ +AWPF PVD ++ +VI+ P
Sbjct: 272 GEGPPHAGTKGTRSEHLRGCDRILRDLLSKNHAAYAWPFYQPVD-------NHLDVIKHP 324
Query: 73 MDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
MD ST+K KMDG + + + ADVRL+F N KYN +V MA+ L FE +
Sbjct: 325 MDPSTVKRKMDGGQ---HPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQAVFEMRL 381
Query: 133 LQL 135
++
Sbjct: 382 AKM 384
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 83
LQ+ ++ T H+ AWPF PVD L L DY+++I+ PMD TIK +++
Sbjct: 75 LQYMRSVVKTLWT-HQSAWPFCRPVDAIKLNLPDYHKIIKNPMDMGTIKKRLE 126
>gi|260784435|ref|XP_002587272.1| hypothetical protein BRAFLDRAFT_99787 [Branchiostoma floridae]
gi|229272414|gb|EEN43283.1| hypothetical protein BRAFLDRAFT_99787 [Branchiostoma floridae]
Length = 1514
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 66/121 (54%), Gaps = 7/121 (5%)
Query: 24 KNLSASLLQFFVRQARSFITQHK--WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 81
+N S L Q + R R + H+ +WPF+ PVDVEG L DY++ I++PM IK+K
Sbjct: 236 RNWSHELQQGY-RILREIMVDHRKNISWPFLDPVDVEGENLWDYHDRIKQPMWLRRIKDK 294
Query: 82 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
+ Y ++ E +D+RLV +N +YN V A+ +EK E+ L LL K +
Sbjct: 295 FHNSE---YSSITEFVSDMRLVLENCYRYNGINHYVSKQAQK-MEKVMEQKLALLSKTLR 350
Query: 142 E 142
E
Sbjct: 351 E 351
>gi|432098345|gb|ELK28145.1| Bromodomain adjacent to zinc finger domain protein 2B [Myotis
davidii]
Length = 2206
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 7/89 (7%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA-DVRLV 103
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ +G + E +A DVRLV
Sbjct: 2117 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLS----SGQYSSPEYFALDVRLV 2170
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
F N +N++ D+ S+ + FE+KW
Sbjct: 2171 FDNCETFNEDDSDIGRAGHSMRKYFEKKW 2199
>gi|407041442|gb|EKE40731.1| bromodomain containing protein [Entamoeba nuttalli P19]
Length = 394
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 63/97 (64%), Gaps = 3/97 (3%)
Query: 35 VRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVR 94
+ + S + ++K ++ F PVD + G +Y+++I+ PMD TIKNK+ KD T Y+NV
Sbjct: 293 INKLLSSLLRNKASFAFKEPVDPQLTGAINYFDIIKHPMDLGTIKNKL--KDKT-YKNVN 349
Query: 95 EIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
EI +D+ LV+ NA KYN +V +AK++ + +E+K
Sbjct: 350 EILSDIDLVWNNAFKYNAPNSEVWNLAKTMSDAYEKK 386
>gi|326426578|gb|EGD72148.1| CBP-A protein [Salpingoeca sp. ATCC 50818]
Length = 2186
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
I H+ + PF+ PVD L DYY++I++PMD TI K+ D Y++ E D+R
Sbjct: 994 IRSHEDSHPFLEPVDTVALNCSDYYDIIKQPMDLGTIGKKLKAGD---YKDPWEYCDDMR 1050
Query: 102 LVFKNAMKYNDERDDVHVMAKSLL 125
L+F+NA YN E+ V MAK+L
Sbjct: 1051 LMFRNAFTYNGEKSIVGKMAKTLF 1074
>gi|68051321|gb|AAY84924.1| IP09966p [Drosophila melanogaster]
Length = 276
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Query: 39 RSFITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREI 96
R F + +K AW F P+D + LGLHDY+E++ +PMD ST++++++ TG Y + +
Sbjct: 31 RLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLN----TGCYLSAADF 86
Query: 97 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
D+RL+F N Y + + MAK L FEE + Q+
Sbjct: 87 AKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFEEMYSQV 125
>gi|194222248|ref|XP_001916271.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Equus caballus]
Length = 2170
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y ++ DVRLVF
Sbjct: 2081 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPSLEAFALDVRLVF 2135
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 2136 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2163
>gi|347963028|ref|XP_311133.5| AGAP000029-PA [Anopheles gambiae str. PEST]
gi|333467394|gb|EAA06516.6| AGAP000029-PA [Anopheles gambiae str. PEST]
Length = 4121
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 41 FITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 100
+TQ + PF PVD LG+ DY++++ +PMD STI+ K++ Y++ RE DV
Sbjct: 2619 LVTQEPESIPFRMPVDPNSLGIPDYFDIVRQPMDLSTIRKKLESGQ---YQDPREYVDDV 2675
Query: 101 RLVFKNAMKYNDERDDVHVMAKSLLEKFE 129
L+F NA YN + V+ L E FE
Sbjct: 2676 WLMFDNAWLYNRKTSRVYRYCTKLSEVFE 2704
>gi|185177636|pdb|2YW5|A Chain A, Solution Structure Of The Bromodomain From Human
Bromodomain Containing Protein 3
Length = 138
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 22 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 78
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 79 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 123
>gi|332234004|ref|XP_003266198.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Nomascus leucogenys]
Length = 2167
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2078 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVF 2132
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ ++ + FE+KW
Sbjct: 2133 DNCETFNEDDSDIGRAGHNMRKYFEKKW 2160
>gi|94681063|ref|NP_038478.2| bromodomain adjacent to zinc finger domain protein 2B [Homo sapiens]
gi|229462995|sp|Q9UIF8.3|BAZ2B_HUMAN RecName: Full=Bromodomain adjacent to zinc finger domain protein 2B;
AltName: Full=hWALp4
gi|119631809|gb|EAX11404.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_b [Homo
sapiens]
gi|119631810|gb|EAX11405.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_b [Homo
sapiens]
gi|119631812|gb|EAX11407.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_b [Homo
sapiens]
gi|162319380|gb|AAI56488.1| Bromodomain adjacent to zinc finger domain, 2B [synthetic construct]
Length = 2168
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2079 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVF 2133
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ ++ + FE+KW
Sbjct: 2134 DNCETFNEDDSDIGRAGHNMRKYFEKKW 2161
>gi|29421196|dbj|BAA96000.2| KIAA1476 protein [Homo sapiens]
Length = 2142
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2053 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVF 2107
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ ++ + FE+KW
Sbjct: 2108 DNCETFNEDDSDIGRAGHNMRKYFEKKW 2135
>gi|402888433|ref|XP_003907566.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Papio anubis]
Length = 2131
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2042 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVF 2096
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ ++ + FE+KW
Sbjct: 2097 DNCETFNEDDSDIGRAGHNMRKYFEKKW 2124
>gi|403258938|ref|XP_003921998.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Saimiri boliviensis boliviensis]
Length = 2170
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2081 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVF 2135
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ ++ + FE+KW
Sbjct: 2136 DNCETFNEDDSDIGRAGHNMRKYFEKKW 2163
>gi|365759249|gb|EHN01049.1| Bdf1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 695
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+ +PF+ PVD + L Y++ +++PMD TI K++ + Y+ + + DVRLVFKN
Sbjct: 345 YNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWE---YQTMEDFERDVRLVFKN 401
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME----EEKRQE--EEEAKAQLDMQLT 160
K+N + V++M L E F KW P + E E+ R + E+ +++
Sbjct: 402 CYKFNPDGTIVNMMGHRLEEVFNSKWAD-RPNLDEYDSDEDSRNQGDYEDYESEYSESDI 460
Query: 161 QEAVQTNKA-KELRSELNEVDMQLENLRETVIQKCRK 196
E + TN A + L +L + ++L+ L++ ++K RK
Sbjct: 461 DEIIITNPAIQYLEEQLARMKVELQQLKKQELEKIRK 497
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A PF+ PVD L + Y+ +++PMD STI+ K+ + Y +I D L+
Sbjct: 177 KDARPFLQPVDPVKLDIPFYFNYVKRPMDLSTIERKL---NVGAYEFPEQITEDFNLMVN 233
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK----VMEEEKRQEEEEAKAQLDMQLTQ 161
N++++N + MA+++ FE+ L + K V+ + +R + AQ D +
Sbjct: 234 NSIRFNGPNAGISQMARNIQASFEKHMLNMPAKDAAPVVAKGRR-----SSAQEDAPIVI 288
Query: 162 EAVQTNKAKELRS 174
QT+ + R+
Sbjct: 289 RRAQTHNGRPKRT 301
>gi|308810150|ref|XP_003082384.1| Zcwcc3-prov protein (ISS) [Ostreococcus tauri]
gi|116060852|emb|CAL57330.1| Zcwcc3-prov protein (ISS) [Ostreococcus tauri]
Length = 1083
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 41 FITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA-D 99
I +K A+ F+ PVD + DY++VI+ PMD TI K++ ++ Y N YA D
Sbjct: 588 IIMTNKNAYMFLKPVDPVYWEIPDYFDVIKNPMDLGTIMTKLEKRE---YENQPSAYAAD 644
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
VRLV+ NAM YN E + V+ MA+ + +FE +W
Sbjct: 645 VRLVWSNAMTYNKEEEPVYKMARIMSREFEYQW 677
>gi|390464478|ref|XP_002806959.2| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Callithrix jacchus]
Length = 2178
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2089 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVF 2143
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ ++ + FE+KW
Sbjct: 2144 DNCETFNEDDSDIGRAGHNMRKYFEKKW 2171
>gi|6683500|dbj|BAA89212.1| bromodomain adjacent to zinc finger domain 2B [Homo sapiens]
Length = 1972
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 1883 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVF 1937
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ ++ + FE+KW
Sbjct: 1938 DNCETFNEDDSDIGRAGHNMRKYFEKKW 1965
>gi|357445295|ref|XP_003592925.1| Bromodomain-containing protein [Medicago truncatula]
gi|140053518|gb|ABE79573.2| Bromodomain [Medicago truncatula]
gi|355481973|gb|AES63176.1| Bromodomain-containing protein [Medicago truncatula]
Length = 679
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
A PF PV+ E LG+ DY+++I+ PMDF TI + ++ D Y N ++Y DVR +++N
Sbjct: 212 AEPFNVPVNPEALGIPDYFDIIDTPMDFGTICSNLEKND--KYMNSEDVYNDVRYIWENC 269
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKW 132
KYN++ D + + K + + F + W
Sbjct: 270 YKYNNKGDYIVDLMKRVKKNFMKYW 294
>gi|333360985|pdb|2L5E|A Chain A, Complex Between Bd1 Of Brd3 And Gata-1 C-Tail
Length = 128
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 20 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 76
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 77 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 121
>gi|395519612|ref|XP_003763937.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B,
partial [Sarcophilus harrisii]
Length = 1045
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 956 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YSNLETFALDVRLVF 1010
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ ++ + FE+KW
Sbjct: 1011 DNCETFNEDDSDIGRAGHNMRKYFEKKW 1038
>gi|170579184|ref|XP_001894716.1| Bromodomain containing protein [Brugia malayi]
gi|158598584|gb|EDP36451.1| Bromodomain containing protein [Brugia malayi]
Length = 1389
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 5/89 (5%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
AWPF+ PVD + + DYY++I++PMD TI NK+ + Y ++ AD RL+F+N
Sbjct: 1295 AWPFLKPVDAKAVP--DYYQIIKRPMDLRTIMNKLKQR---LYDTPDQVIADARLIFENC 1349
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
YN+E +++ A L + EE++ ++L
Sbjct: 1350 RIYNEEESEIYKCANKLEQFMEERFSKIL 1378
>gi|449271665|gb|EMC81949.1| E3 ubiquitin-protein ligase TRIM33 [Columba livia]
Length = 878
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 76/143 (53%), Gaps = 5/143 (3%)
Query: 41 FITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 100
++ H+ + F PV + +YY++I+KPMD ST+K K+ K Y+ + ADV
Sbjct: 740 YLYCHELSIEFQEPVPA---SIPNYYKIIKKPMDLSTVKKKLQKKHSQHYQTPEDFVADV 796
Query: 101 RLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP-KVMEEEKRQEEEEAKAQLDMQL 159
RL+FKN ++N+ +V K++ FE+K ++ P + + E+EE ++
Sbjct: 797 RLIFKNCERFNEADSEVAQAGKAVALYFEDKLTEIYPDRTFQPLPEFEQEEDDGEITEDS 856
Query: 160 TQEAVQTNKAKELRSELNEVDMQ 182
++ +Q + K L+S+ V ++
Sbjct: 857 DEDFIQPRR-KRLKSDERPVHIK 878
>gi|195347028|ref|XP_002040056.1| GM15561 [Drosophila sechellia]
gi|194135405|gb|EDW56921.1| GM15561 [Drosophila sechellia]
Length = 267
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKN 106
AW F P+D + LGLHDY+E++++PMD ST++++++ TG Y N + D+RL+F N
Sbjct: 33 AWVFYEPLDPQLLGLHDYHEIVQEPMDLSTVRHRLN----TGCYLNAVDFAKDIRLIFYN 88
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 149
Y + + MAK L FE+ + + + + + EE
Sbjct: 89 TYLYTNPDHLCYHMAKQLQIIFEDMFSHVHLYICSGSRMRAEE 131
>gi|426337492|ref|XP_004032738.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Gorilla gorilla gorilla]
Length = 2090
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2001 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVF 2055
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ ++ + FE+KW
Sbjct: 2056 DNCETFNEDDSDIGRAGHNMRKYFEKKW 2083
>gi|122921158|pdb|2NXB|A Chain A, Crystal Structure Of Human Bromodomain Containing Protein
3 (Brd3)
gi|122921159|pdb|2NXB|B Chain B, Crystal Structure Of Human Bromodomain Containing Protein
3 (Brd3)
gi|340708299|pdb|3S91|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd3
In Complex With The Inhibitor Jq1
Length = 123
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 18 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 74
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 75 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 119
>gi|62177117|ref|NP_001001182.2| bromodomain adjacent to zinc finger domain, 2B [Mus musculus]
Length = 2123
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ +WPF+ PV+++ + Y +VI+KPMDFSTI+ K++ Y N DVRLVF
Sbjct: 2034 HEDSWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLNNGQ---YPNFETFALDVRLVF 2088
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 2089 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2116
>gi|195123201|ref|XP_002006096.1| GI20845 [Drosophila mojavensis]
gi|193911164|gb|EDW10031.1| GI20845 [Drosophila mojavensis]
Length = 468
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H ++ PFM PVD E L + YY VIE PMD TI ++ + Y NV E+ D+R
Sbjct: 47 LPHHDFSLPFMEPVDTEALKVPSYYTVIEHPMDMGTIIKRV---ENNYYHNVNELVYDIR 103
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ 158
LV N K+N V+ + L E F++ + LPK EE +E+A+ L M
Sbjct: 104 LVISNCFKFNMPGSLVYRNGQELEELFKQVY-DSLPK--GEEVPCSKEQAEKSLTMH 157
>gi|67472714|ref|XP_652145.1| bromodomain protein [Entamoeba histolytica HM-1:IMSS]
gi|56468960|gb|EAL46759.1| bromodomain protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449706931|gb|EMD46677.1| bromo domain containing protein [Entamoeba histolytica KU27]
Length = 394
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 63/97 (64%), Gaps = 3/97 (3%)
Query: 35 VRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVR 94
+ + S + ++K ++ F PVD + G +Y+++I+ PMD TIKNK+ KD T Y+NV
Sbjct: 293 INKLLSSLLRNKASFAFKEPVDPQLTGAINYFDIIKHPMDLGTIKNKL--KDKT-YKNVN 349
Query: 95 EIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E+ +D+ LV+ NA KYN +V +AK++ + +E+K
Sbjct: 350 EVLSDIDLVWNNAFKYNAPNSEVWNLAKTMSDAYEKK 386
>gi|195585984|ref|XP_002082758.1| GD25062 [Drosophila simulans]
gi|194194767|gb|EDX08343.1| GD25062 [Drosophila simulans]
Length = 271
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKN 106
AW F P+D + LGLHDY+E++++PMD ST++++++ TG Y N + D+RL+F N
Sbjct: 33 AWVFYEPLDPQLLGLHDYHEIVQEPMDLSTVRHRLN----TGCYLNAVDFANDIRLIFYN 88
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
Y + + MAK L FE+ + +
Sbjct: 89 TYLYTNPDHLCYHMAKQLQIIFEDMFAHV 117
>gi|403415508|emb|CCM02208.1| predicted protein [Fibroporia radiculosa]
Length = 771
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 115/255 (45%), Gaps = 40/255 (15%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM-DGKDGTGYRNVREIYADVRLV 103
+ A PF PVD L + Y +V+++PMD STIK K+ DG+ Y + D +L+
Sbjct: 444 YGIAHPFYEPVDWVKLEIPQYPKVVKRPMDLSTIKRKLTDGE----YSTPDKFRDDFKLM 499
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP-KVMEEEKRQEEEEAKAQLDMQLTQE 162
+N +N ++ VH K L F++KW +L P + E +++EE + D +
Sbjct: 500 IRNCFAFNPPKNPVHEAGKELDRLFDDKWRELPPLRSQEASDDEDDEEDEDSEDDRARMI 559
Query: 163 AVQTNKAKELRSELNEVD-----------------MQLENLRETVIQKCRKMST------ 199
A ++ + +RS L+ + + + + ++ ++ + S+
Sbjct: 560 ATMESQIQSMRSNLDTLKRKGKPEKKEKKKKEKAVVPVASTSKSTTKQAKAASSGRKKGK 619
Query: 200 -----------EEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSEL 248
E+KK+L + +L L K ++I+ E P + +E++L++D
Sbjct: 620 KPITDDDVLTFEQKKDLSDTIGKLDGHRLEKVIQIIHEGVPEIRDSTEEIELEIDQLPST 679
Query: 249 TLWRLKVFVQESLKA 263
L +L FV ++A
Sbjct: 680 VLTKLYNFVIRPMRA 694
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 25 NLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 84
+S++ +F R+ + + K A PF+HPVD L + Y +++ PMDFST++ KM
Sbjct: 223 TISSAQWRFCTSTIRT-LKKIKDAGPFLHPVDPVALNVPHYPSIVKHPMDFSTVERKMTS 281
Query: 85 KDGTG---------YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ + Y NV E ADVRL+F N +N + M + + F+++ QL
Sbjct: 282 CNPSKPDPNPANPRYNNVDEFIADVRLIFTNCALFNGPDHPITAMGRRVEAVFDKQIKQL 341
>gi|348519278|ref|XP_003447158.1| PREDICTED: hypothetical protein LOC100691541 [Oreochromis
niloticus]
Length = 1601
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 23/178 (12%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ HK +WPF+ PVD +Y+E+I+ PMD STI+ K++ + Y E +DV+
Sbjct: 417 LKAHKDSWPFLEPVDDSYAP--NYHEIIQTPMDLSTIEKKLNNGE---YVAKEEFVSDVK 471
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L+F+N ++YN E + +MA+SL F L+ P E+ + +++
Sbjct: 472 LMFENCVEYNGEDSEYTIMAESLERCFSRALLKHFP----------SEDGDTDEEFHISR 521
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTA-----LTRLSP 214
E + KE + N E+L Q RK S+++ K+ T+ L RL P
Sbjct: 522 E---DKERKEKKRNRNSKAFGPESLIRATEQVQRKRSSQKGKSSATSEEDARLARLHP 576
>gi|403344522|gb|EJY71608.1| Bromodomain-containing protein [Oxytricha trifallax]
Length = 797
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ +W F PVD L + DYY++I+ PMD S +K K++ + Y + + DV+L+F
Sbjct: 704 HQNSWIFHEPVDPIKLNIPDYYDIIKNPMDLSQVKTKLNNNE---YTKINDFLYDVQLIF 760
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N + YN + V M KS+ ++F++++
Sbjct: 761 DNCLLYNGDSTQVSQMCKSVRDEFQKQY 788
>gi|395732421|ref|XP_002812584.2| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Pongo abelii]
Length = 2004
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 1915 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVF 1969
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ ++ + FE+KW
Sbjct: 1970 DNCETFNEDDSDIGRAGHNMRKYFEKKW 1997
>gi|148695007|gb|EDL26954.1| bromodomain adjacent to zinc finger domain, 2B [Mus musculus]
Length = 2193
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ +WPF+ PV+++ + Y +VI+KPMDFSTI+ K++ Y N DVRLVF
Sbjct: 2104 HEDSWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLNNGQ---YPNFETFALDVRLVF 2158
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 2159 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2186
>gi|223462537|gb|AAI50815.1| Baz2b protein [Mus musculus]
Length = 2158
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ +WPF+ PV+++ + Y +VI+KPMDFSTI+ K++ Y N DVRLVF
Sbjct: 2069 HEDSWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLNNGQ---YPNFETFALDVRLVF 2123
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ S+ + FE+KW
Sbjct: 2124 DNCETFNEDDSDIGRAGHSMRKYFEKKW 2151
>gi|334323910|ref|XP_003340460.1| PREDICTED: e3 ubiquitin-protein ligase TRIM33 isoform 2 [Monodelphis
domestica]
Length = 1126
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
Query: 41 FITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 100
++ H+ + F PV V + +YY++I+KPMD ST+K K+ K Y+ + ADV
Sbjct: 988 YLYCHELSIEFQEPVPV---SIPNYYKIIKKPMDLSTVKKKLQKKHSQHYQIPDDFVADV 1044
Query: 101 RLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-----LPKVMEEEKRQEEEEAKAQL 155
RL+FKN ++N+ +V KS+ FE+K ++ P + E E+ +++ E
Sbjct: 1045 RLIFKNCERFNEADSEVAQAGKSVALYFEDKLTEIYSDRTFPPLPEFEQEEDDGEITEDS 1104
Query: 156 DMQLTQ 161
D Q
Sbjct: 1105 DEDFIQ 1110
>gi|194881298|ref|XP_001974785.1| GG21955 [Drosophila erecta]
gi|190657972|gb|EDV55185.1| GG21955 [Drosophila erecta]
Length = 670
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
L FF + + K+A F+ PVD E L + YY VI++PMD TI ++ Y
Sbjct: 35 LHFFKKHLLDEAHKKKYALDFLEPVDTEALKVPTYYTVIDRPMDIGTILKRV---QNNYY 91
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
R++ E AD +L+ +N +N D V+ + +LEKF + L+ LP
Sbjct: 92 RSINEAIADFKLIIRNCFVFNQPGDVVYRKGQ-MLEKFFTRKLRCLP 137
>gi|115474431|ref|NP_001060812.1| Os08g0109500 [Oryza sativa Japonica Group]
gi|42408376|dbj|BAD09527.1| DNA-binding protein family-like [Oryza sativa Japonica Group]
gi|113622781|dbj|BAF22726.1| Os08g0109500 [Oryza sativa Japonica Group]
Length = 590
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
A PF PVD LG+ DY+++I+ PMDF TI ++ G Y N ++Y DV+ ++ N
Sbjct: 255 AEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLE--RGDKYMNSEDVYKDVQFIWDNC 312
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWL 133
KYN + D + + K + + F + WL
Sbjct: 313 TKYNSKGDYIIELMKRVKKGFMKNWL 338
>gi|395146565|gb|AFN53717.1| putative bromodomain-containing protein [Linum usitatissimum]
Length = 216
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H + W F PVD L + DY+ +I PMD TI +K+ K Y + ADVRL F
Sbjct: 19 HPYGWIFSKPVDPVELNIPDYFTIITNPMDLGTINSKLSKKK---YFGAEDFAADVRLTF 75
Query: 105 KNAMKYNDERDDVHVMAKSLLE 126
NAM YN + VH A L++
Sbjct: 76 ANAMLYNPPSNSVHTTALELVK 97
>gi|255089248|ref|XP_002506546.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226521818|gb|ACO67804.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 208
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +H++ + F PVD L + DY++V++ PMD T+ NK+ ++G +V + D R
Sbjct: 92 LQRHRFYFIFAQPVDPVALNIPDYFDVVKTPMDLGTVANKV--RNGAYKGDVTDFEDDAR 149
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
LVF N YN D M ++ ++F++KW++ L V ++E R+ + A D T+
Sbjct: 150 LVFSNCRAYNPPGSDAATMGDAVEKEFDKKWIE-LGFVFKDETREMPKPPGAGGDEMRTK 208
>gi|125559896|gb|EAZ05344.1| hypothetical protein OsI_27549 [Oryza sativa Indica Group]
Length = 590
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
A PF PVD LG+ DY+++I+ PMDF TI ++ G Y N ++Y DV+ ++ N
Sbjct: 255 AEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLE--RGDKYMNSEDVYKDVQFIWDNC 312
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWL 133
KYN + D + + K + + F + WL
Sbjct: 313 TKYNSKGDYIIELMKRVKKGFMKNWL 338
>gi|392597188|gb|EIW86510.1| Bromodomain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 599
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 114/261 (43%), Gaps = 45/261 (17%)
Query: 44 QHKWAW--PFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
QH WA PF PVD L + Y ++I+KPMD ST++ K+D D Y NV + Y D +
Sbjct: 263 QH-WAIAHPFYEPVDHVALDIPSYPKIIKKPMDLSTMRKKLDSGD---YPNVMKFYEDFK 318
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP--------KVMEEEKRQEEEEAKA 153
L+ +N +N V+ L + F+EKW L P EE++ +E+ A+A
Sbjct: 319 LMIRNCFLFNPSGTPVNQAGVDLQKLFDEKWKNLPPLKEEGSDEDEYEEDEATDEDRARA 378
Query: 154 QLDMQLTQEAVQT------NKAKELRSELNEVDMQLENLRETVIQKCRKM--------ST 199
++ E+++ NKA + E +L + T K ST
Sbjct: 379 IASIEAQIESMRGNLLALKNKAVPKEKKKKEKKEKLAPVASTSKSTTSKPKAAAASNGST 438
Query: 200 EEKK-----------------NLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDM 242
+ KK +L ++RL L K ++I+ E P + +E++L++
Sbjct: 439 KRKKKSTSSQEDDTLSFEQKKDLSDTISRLDGTKLEKVIQIIHEGVPEIRDSTEEIELEI 498
Query: 243 DAQSELTLWRLKVFVQESLKA 263
D L +L FV ++A
Sbjct: 499 DLLPTHVLTKLYNFVIRPIRA 519
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Query: 21 GGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKN 80
G L+A+ ++ + R + + K A F++PVD L + Y VI+ PMD ST++
Sbjct: 39 SGSLPLTAAQHKYCMSTVRQ-LKRIKDAAAFLYPVDPVALNIPHYPTVIKNPMDLSTVER 97
Query: 81 KMDG---------KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
K+ Y E ADVRL+F N + +N D V A +E +K
Sbjct: 98 KLSSSLPQKSDPNPANPRYHTADEFIADVRLIFSNCITFNGP-DHVISQAGKHVESVFDK 156
Query: 132 WLQLLP 137
++ LP
Sbjct: 157 QIKQLP 162
>gi|125555277|gb|EAZ00883.1| hypothetical protein OsI_22908 [Oryza sativa Indica Group]
Length = 571
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
A PF PVD LG+ DY+++I+ PMDF TI ++ G Y N ++Y DV+ ++ N
Sbjct: 236 AEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLE--RGDKYMNSEDVYKDVQFIWDNC 293
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWL 133
KYN + D + + K + + F + WL
Sbjct: 294 TKYNSKGDYIIELMKRVKKGFMKNWL 319
>gi|355750561|gb|EHH54888.1| hypothetical protein EGM_03990 [Macaca fascicularis]
Length = 2371
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2277 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVF 2331
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ ++ + FE+KW
Sbjct: 2332 DNCETFNEDDSDIGRAGHNMRKYFEKKW 2359
>gi|326491431|dbj|BAJ94193.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 577
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
A PF PVD LG+ DY +VI+ PMDF TI ++ G+ Y N ++Y DV+ ++ N
Sbjct: 250 AEPFNTPVDPIALGIPDYLDVIDTPMDFGTICQDLE--RGSKYMNSEDVYKDVQFIWDNC 307
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWL 133
KYN + D + + K + + F + WL
Sbjct: 308 TKYNSKGDYIIELMKRVKKAFMKNWL 333
>gi|115467990|ref|NP_001057594.1| Os06g0355500 [Oryza sativa Japonica Group]
gi|113595634|dbj|BAF19508.1| Os06g0355500 [Oryza sativa Japonica Group]
gi|215686882|dbj|BAG89732.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 378
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
A PF PVD LG+ DY+++I+ PMDF TI ++ G Y N ++Y DV+ ++ N
Sbjct: 256 AEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLE--RGDKYMNSEDVYKDVQFIWDNC 313
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWL 133
KYN + D + + K + + F + WL
Sbjct: 314 TKYNSKGDYIIELMKRVKKGFMKNWL 339
>gi|222635545|gb|EEE65677.1| hypothetical protein OsJ_21293 [Oryza sativa Japonica Group]
Length = 579
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
A PF PVD LG+ DY+++I+ PMDF TI ++ G Y N ++Y DV+ ++ N
Sbjct: 255 AEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLE--RGDKYMNSEDVYKDVQFIWDNC 312
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWL 133
KYN + D + + K + + F + WL
Sbjct: 313 TKYNSKGDYIIELMKRVKKGFMKNWL 338
>gi|218195611|gb|EEC78038.1| hypothetical protein OsI_17470 [Oryza sativa Indica Group]
Length = 330
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 28/218 (12%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIK-NKMDGKDGTGYRNVREIYADVRLVFKNAMK 109
F PV+V+ LGL DY+ VI+ PMD T++ N G+ Y + + AD+RL F NA++
Sbjct: 21 FNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGR----YPSHDDFAADIRLTFSNALR 76
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKA 169
YN +VH A LL FE+ + + +E K E ++ + Q
Sbjct: 77 YNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPVPPPELPPAKAPAQ---- 132
Query: 170 KELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNP 229
++ V M+ RE R+M+ EEK + + R NP
Sbjct: 133 --VKPRAGNVKMRKTKAREP---NKREMTLEEKNFVEGWIVRKR------------NGNP 175
Query: 230 SFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRS 267
E++LD+D T W L FV + KA ++S
Sbjct: 176 EL--VGGEIELDIDEMDVETQWELDRFVNKFKKALNKS 211
>gi|195503051|ref|XP_002098489.1| GE23913 [Drosophila yakuba]
gi|194184590|gb|EDW98201.1| GE23913 [Drosophila yakuba]
Length = 535
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 41 FITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 100
FI + + ++ F HPVD LG+ DY+ V++ PMD STI+ ++ Y E D
Sbjct: 53 FIWRSRCSYHFRHPVDAVSLGVPDYHAVVKHPMDLSTIRKRL---HNNYYWQASEALEDF 109
Query: 101 RLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-LPKVMEEEKRQEEEEAKA 153
+L+F+N M YN E VH K L E F + + L K +E + + E+ + KA
Sbjct: 110 KLIFENCMMYNLEGSPVHQAGKDLKEAFNTRLASIDLSKEVELKPKSEKRKRKA 163
>gi|325193402|emb|CCA27731.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 2004
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 43 TQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRL 102
++H WA F PVD + DY+++I+ PMD IK +++ + Y +V ADVRL
Sbjct: 739 SEHGWA--FNSPVDPVQWNIPDYFDIIKCPMDLGAIKKRLENEH---YNSVDAFAADVRL 793
Query: 103 VFKNAMKYNDERDDVHVMAKSLLEKFEE 130
VF+N + YN + ++ AK LL +FE+
Sbjct: 794 VFENCIAYNSSTNKFNIAAKQLLTQFEK 821
>gi|340374210|ref|XP_003385631.1| PREDICTED: hypothetical protein LOC100637162 [Amphimedon
queenslandica]
Length = 2504
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 56/90 (62%), Gaps = 7/90 (7%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM-DGKDGTGYRNVREIYADVRLVFKN 106
AWPF+ PV+ + + DYY VI+KPMDF T+K K+ +GK Y N + DVRL+F N
Sbjct: 2418 AWPFLEPVNRKKIP--DYYRVIKKPMDFHTVKQKLREGK----YPNKESLALDVRLIFDN 2471
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
YN++ + + ++ + FE++W +++
Sbjct: 2472 CAFYNEDNSQIGLAGHNMRQYFEKRWTEMM 2501
>gi|405959089|gb|EKC25157.1| Bromodomain adjacent to zinc finger domain protein 1A [Crassostrea
gigas]
Length = 1488
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 56/90 (62%), Gaps = 5/90 (5%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +H+ +WPF+ PV+ + + DYY++I PMDFSTI+NKM+ + Y V E+ +DVR
Sbjct: 1382 LVKHEDSWPFLKPVNKKLVP--DYYDIIAIPMDFSTIRNKMNSYE---YVEVSELISDVR 1436
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
+F N +YN + + +L + FE++
Sbjct: 1437 QIFSNCFEYNKKTTTEYKAGSTLSKMFEKR 1466
>gi|389632607|ref|XP_003713956.1| hypothetical protein MGG_08925 [Magnaporthe oryzae 70-15]
gi|351646289|gb|EHA54149.1| hypothetical protein MGG_08925 [Magnaporthe oryzae 70-15]
Length = 1021
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM-DGKDGTGYRNVREIYADVRLV 103
H AW F PVD G YY +I+KPMD T+ K+ +GK YR+ + AD L+
Sbjct: 611 HGIAWIFAKPVDETRDGAPGYYSIIKKPMDLGTMTVKLQEGK----YRSAADFKADFDLM 666
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
N +N DVH +A++L F++KW +
Sbjct: 667 LNNCFTFNPAGTDVHALARNLEAYFQDKWAGI 698
>gi|452821989|gb|EME29013.1| histone acetyltransferase [Galdieria sulphuraria]
Length = 423
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY-ADV 100
+ QH+ AWPF+ PVD E G DYY+VI+ P+D TI+ ++D D Y +EI+ AD+
Sbjct: 335 VKQHQSAWPFLEPVDPEQTGALDYYDVIKNPIDLRTIQERLDRGD---YYVTKEIFAADL 391
Query: 101 RLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
+ + +N YN E+ + +A +L F +K
Sbjct: 392 KRMIENCEAYNGEKHFITELAHNLERFFNQK 422
>gi|440473196|gb|ELQ42011.1| hypothetical protein OOU_Y34scaffold00240g18 [Magnaporthe oryzae
Y34]
gi|440484338|gb|ELQ64424.1| hypothetical protein OOW_P131scaffold00625g16 [Magnaporthe oryzae
P131]
Length = 1000
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM-DGKDGTGYRNVREIYADVRLV 103
H AW F PVD G YY +I+KPMD T+ K+ +GK YR+ + AD L+
Sbjct: 590 HGIAWIFAKPVDETRDGAPGYYSIIKKPMDLGTMTVKLQEGK----YRSAADFKADFDLM 645
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
N +N DVH +A++L F++KW +
Sbjct: 646 LNNCFTFNPAGTDVHALARNLEAYFQDKWAGI 677
>gi|222639784|gb|EEE67916.1| hypothetical protein OsJ_25776 [Oryza sativa Japonica Group]
Length = 678
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
A PF PVD LG+ DY+++I+ PMDF TI ++ G Y N ++Y DV+ ++ N
Sbjct: 248 AEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLE--RGDKYMNSEDVYKDVQFIWDNC 305
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWL 133
KYN + D + + K + + F + WL
Sbjct: 306 TKYNSKGDYIIELMKRVKKGFMKNWL 331
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
A PF PVD LG+ DY+++I+ PMDF TI ++ G Y N ++Y DV+ ++ N
Sbjct: 343 AEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLE--RGDKYMNSEDVYKDVQFIWDNC 400
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWL 133
KYN + D + + K + + F + WL
Sbjct: 401 TKYNSKGDYIIELMKRVKKGFMKNWL 426
>gi|403214547|emb|CCK69048.1| hypothetical protein KNAG_0B06180 [Kazachstania naganishii CBS
8797]
Length = 654
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 42 ITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 98
+T K+A +PF+ PVD + L Y++ +++PMD TI K+ + Y+ + E A
Sbjct: 299 LTNKKYASFNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTISKKLSNWE---YQTMEEFEA 355
Query: 99 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
D+RLVFKN +N + V++M L E F KW
Sbjct: 356 DIRLVFKNCYSFNPDGTIVNMMGHRLEEVFNSKW 389
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 7/132 (5%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A PF+ PVD L L Y+ I++PMD ST++ K+ + Y + D L+
Sbjct: 134 KDAKPFLQPVDTVALNLPLYFNYIKRPMDLSTVERKL---NLNAYETPESVTEDFNLMVD 190
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQL----LPKVMEEEKRQEEEEAKAQLDMQLTQ 161
N +K+N + MA+++ FE+ L + P ++++ K +++++ D +
Sbjct: 191 NCVKFNGPASAIAQMARNIQASFEKHMLNMPAKDAPVIIQQNKSRKKKKGGEDEDTPVVI 250
Query: 162 EAVQTNKAKELR 173
QT+ + R
Sbjct: 251 RRAQTHSGRPKR 262
>gi|145512850|ref|XP_001442336.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409689|emb|CAK74939.1| unnamed protein product [Paramecium tetraurelia]
Length = 478
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 6/85 (7%)
Query: 36 RQARSFITQ---HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 92
+QA+ I Q K A+ F PVD + + DY+++I+KPMDF TIKNK+ + Y+
Sbjct: 373 KQAKKIIAQIWKAKGAYLFREPVDQQKFNITDYFDIIKKPMDFGTIKNKL---NVNAYKT 429
Query: 93 VREIYADVRLVFKNAMKYNDERDDV 117
+RE +AD+ LVF N YN ++ +
Sbjct: 430 LREFHADMMLVFDNCGIYNGTQNAI 454
>gi|328770698|gb|EGF80739.1| hypothetical protein BATDEDRAFT_88064 [Batrachochytrium
dendrobatidis JAM81]
Length = 897
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 31 LQFFVRQARSFITQHKWAW--PFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGT 88
L+F R +H + PF+ PVD LG+ Y +I +PMD ST++ K+D D
Sbjct: 464 LKFCSYIQRELSKKHHSPYNLPFLVPVDPIALGIPHYRSIITRPMDLSTMRKKLDNGD-- 521
Query: 89 GYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
Y + E AD+RL+ N +N DV+ + K L F KW +
Sbjct: 522 -YEHASEFEADMRLMLNNCYTFNPPGTDVYNLGKRLEGAFNNKWTE 566
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 66/135 (48%), Gaps = 14/135 (10%)
Query: 9 SKMHFIGKKLLEGGCKNLSASLLQFFVRQARSF------ITQHKWAWPFMHPVDVEGLGL 62
SK+ F G E N++ L F Q + F + + K A F+ PVD L +
Sbjct: 284 SKLPFSG----EHAASNMATDSLLLFKDQIKWFSGLTRNMRKRKDAVIFLVPVDPIALNI 339
Query: 63 HDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAK 122
Y VI++PMD STI K+ K GY +V I AD L+F N +N V VMAK
Sbjct: 340 PTYSTVIKQPMDISTIDKKLQNK---GYSDVATIKADFELMFNNCYTFNGADSQVSVMAK 396
Query: 123 SLLEKFEEKWLQLLP 137
+ L+ + K L+ LP
Sbjct: 397 N-LQAWYHKELEKLP 410
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%)
Query: 196 KMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKV 255
+++ E+K+ L ++ L E LC LEI+ EN +E+ LD+D+ + LW+L
Sbjct: 781 EITYEQKRELSESIDLLPHERLCTVLEIIKENAQLNTTGEEEIVLDIDSLDKSVLWKLYK 840
Query: 256 FVQESLKAASRSSGDMG 272
FV++ ++ S+ + ++
Sbjct: 841 FVRKHTRSISKPATEVA 857
>gi|367033223|ref|XP_003665894.1| hypothetical protein MYCTH_2096131 [Myceliophthora thermophila ATCC
42464]
gi|347013166|gb|AEO60649.1| hypothetical protein MYCTH_2096131 [Myceliophthora thermophila ATCC
42464]
Length = 441
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 50 PFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMK 109
PF PVD E G+ DY++VI+KPMD +T+K KMD + Y++ E AD+ +F N
Sbjct: 346 PFKDPVDPERDGVPDYFDVIKKPMDLTTMKGKMDRHE---YKDENEFLADMNQIFTNCYT 402
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQL 135
Y E+D + + L + FE+K+ Q+
Sbjct: 403 YWREQDPMWAACEKLQKSFEDKYAQM 428
>gi|291225093|ref|XP_002732536.1| PREDICTED: bromodomain adjacent to zinc finger domain, 1B-like
[Saccoglossus kowalevskii]
Length = 1438
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+T+HK +WPF PV E + DYY++I PMDF T+KNK + Y++V D++
Sbjct: 1305 LTRHKDSWPFRKPV--EKVEAPDYYDIISDPMDFQTMKNKCLCIE---YKSVDAFMEDIK 1359
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
LVF NA YN +V +SL E F E + LP
Sbjct: 1360 LVFNNAEIYNKTGSEVLQCQESLEEHFAELVEKFLP 1395
>gi|195997813|ref|XP_002108775.1| hypothetical protein TRIADDRAFT_52097 [Trichoplax adhaerens]
gi|190589551|gb|EDV29573.1| hypothetical protein TRIADDRAFT_52097 [Trichoplax adhaerens]
Length = 950
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
WPF PVD E LGL DYY+ I++PM IK K + Y + E+ +D+RL+ +N
Sbjct: 69 TWPFREPVDTEKLGLWDYYDRIKQPMCLVWIKKKF---YDSSYTTINEVLSDIRLMIENC 125
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 145
+YN + + + + L + E+K + L PK + ++ R
Sbjct: 126 YRYNGSKHWISKLGQKLEKTIEQK-INLFPKSLRDKLR 162
>gi|150866686|ref|XP_001386360.2| hypothetical protein PICST_73625 [Scheffersomyces stipitis CBS
6054]
gi|149387942|gb|ABN68331.2| transcription factor [Scheffersomyces stipitis CBS 6054]
Length = 636
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 63/107 (58%), Gaps = 5/107 (4%)
Query: 28 ASLLQFFVRQARSFITQ--HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 85
A+ L+F + + +++ + + +PF+ PVD L + +Y++V+++PMD TI++K+
Sbjct: 302 AAELRFCSQTVKELMSKKHNGYNFPFVAPVDPVALNIPNYFKVVKEPMDLGTIQSKLTNN 361
Query: 86 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
Y N E D+RLVFKN +N E +V++M L F+++W
Sbjct: 362 Q---YENGDEFERDIRLVFKNCYIFNPEGSEVNMMGHRLEAVFDKRW 405
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
A PF+HPVD+ L + YY I +PMD STI+ K+ Y + +I D L+ N
Sbjct: 151 AVPFLHPVDIVKLNIPFYYNYIPRPMDLSTIETKV---HVNAYEDSNQIVEDFNLMVANC 207
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 140
K+N E + MA ++ FE+ L PKV+
Sbjct: 208 KKFNGENAGISKMADNIQAHFEKHMLNFPPKVL 240
>gi|149237571|ref|XP_001524662.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451259|gb|EDK45515.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 788
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+ +PF+ PVD L + +Y+++++ PMDF TI++K+ Y + + DV+LVF N
Sbjct: 452 YNFPFLAPVDAVALNIPNYHDIVKHPMDFGTIQSKLTNNQ---YESGDDFEKDVKLVFHN 508
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
+N E DV++M + F++KW Q
Sbjct: 509 CYLFNPEGTDVNMMGHRMEAVFDKKWAQ 536
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A PF+HPVD L + YY I +PMD STI+ K++ K Y ++ + D L+
Sbjct: 273 KDAAPFLHPVDTVKLNIPFYYNYIPRPMDLSTIERKLNAK---AYEDISQFADDFNLMVA 329
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
N K+N E + MA ++ FE+ L PK
Sbjct: 330 NCKKFNGETAGISRMATNIQAHFEKHMLNAPPK 362
>gi|365991080|ref|XP_003672369.1| hypothetical protein NDAI_0J02340 [Naumovozyma dairenensis CBS 421]
gi|343771144|emb|CCD27126.1| hypothetical protein NDAI_0J02340 [Naumovozyma dairenensis CBS 421]
Length = 733
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+ +PF+ PVD L L YY+ +++PMD TI K++ + Y + + DVRLVFKN
Sbjct: 376 FNYPFLEPVDPVALNLPTYYDYVKEPMDLGTISKKLNNWE---YETMDQFGDDVRLVFKN 432
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEE----------EEAKAQLD 156
+N + V++M L E F KW P + E +E +EA++ ++
Sbjct: 433 CYAFNPDGTIVNMMGHRLEEVFNNKWAD-RPTIDNYEDTDDESKYDNGDMSSDEAESDME 491
Query: 157 MQLTQEAVQTNKA-KELRSELNEVDMQLENLRETVIQKCRK 196
E TN A + L +L + ++L+ L+ +++ RK
Sbjct: 492 ESEIDETSITNPAIQYLEEQLARMKVELQVLKNQELERIRK 532
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A PF+ PVD+ L + YY + +PMD STI+ K+ + Y +I D L+
Sbjct: 199 KDARPFLKPVDIVALNIPFYYNYVPRPMDLSTIEKKL---NVNAYSEPEQITDDFNLMVN 255
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
N++K+N + MA+++ FE+ L + K
Sbjct: 256 NSIKFNGPTAVISQMARNIQAAFEKHMLNMAAK 288
>gi|401624564|gb|EJS42620.1| bdf1p [Saccharomyces arboricola H-6]
Length = 695
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 81/157 (51%), Gaps = 11/157 (7%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+ +PF+ PVD + L Y+E +++PMD TI K++ + Y+ + + DVRLVFKN
Sbjct: 345 YNYPFLEPVDPVSMNLPTYFEYVKEPMDLGTIAKKLNDWE---YQTMEDFERDVRLVFKN 401
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQ------EEEEAKAQLDMQLT 160
+N + V++M L E F KW P + E + + + ++ +++
Sbjct: 402 CYTFNPDGTIVNMMGHRLEEVFNSKWAD-RPNLDEYDSDEDLRNQGDYDDYESEFSESDI 460
Query: 161 QEAVQTNKA-KELRSELNEVDMQLENLRETVIQKCRK 196
E + TN A + L +L + ++L+ L+E + K RK
Sbjct: 461 DETIITNPAIQYLEEQLARMKVELQQLKEQELDKIRK 497
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A PF+ PVD L + Y+ I++PMD STI+ K+ + Y +I D ++
Sbjct: 177 KDARPFLQPVDPVKLDIPFYFNYIKRPMDLSTIERKL---NVGAYEVPEQIMEDFNVMVN 233
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQ 165
N++++N + MA+++ FE+ L +P + + AQ D + Q
Sbjct: 234 NSIRFNGPNAGISQMARNIQASFEKHMLN-MPAKDAPPAPTKGRRSSAQEDTPVVIRRAQ 292
Query: 166 TNKAKELRS 174
T+ + R+
Sbjct: 293 THNGRPKRT 301
>gi|194756078|ref|XP_001960306.1| GF11581 [Drosophila ananassae]
gi|190621604|gb|EDV37128.1| GF11581 [Drosophila ananassae]
Length = 638
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 84/185 (45%), Gaps = 30/185 (16%)
Query: 8 SSKMHFIGKKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYE 67
++KMH+ K LL+ CK K+A F+ PVD E L + YY
Sbjct: 32 TNKMHYFKKHLLDEVCKK--------------------KFALDFLEPVDTEALQVPTYYT 71
Query: 68 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 127
VI++PMD TI ++ YR V E AD R + +N +N D V+ + +LEK
Sbjct: 72 VIDRPMDVGTITKRV---QNNYYRLVDEAVADFRQIIRNCFTFNRPGDVVYRKGQ-MLEK 127
Query: 128 FEEKWLQLLPKVMEEEKRQEEEE-AKAQLDMQLTQEAVQT-----NKAKELRSELNEVDM 181
F K ++ +PK E ++ K +L+ + + QT + K+L++ N+ D
Sbjct: 128 FFLKKIKAMPKGPELPCNKDPRAVGKPRLNAKAVATSAQTEHICREQLKKLQAVTNQADT 187
Query: 182 QLENL 186
N
Sbjct: 188 TARNF 192
>gi|357144397|ref|XP_003573278.1| PREDICTED: uncharacterized protein LOC100831261 [Brachypodium
distachyon]
Length = 593
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
A PF PVD LG+ DY +VI+ PMDF TI + ++ G Y N ++Y DV+ ++ N
Sbjct: 262 AEPFNTPVDPVALGIPDYLDVIDTPMDFGTICHDLE--HGNKYINSEDVYKDVQFIWDNC 319
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWL 133
KYN + D + + K + + F + WL
Sbjct: 320 TKYNSKGDYIIELMKRVKKAFMKNWL 345
>gi|281207562|gb|EFA81745.1| PHD zinc finger-containing protein [Polysphondylium pallidum PN500]
Length = 730
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 21/133 (15%)
Query: 30 LLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 89
++ ++ +RS KW F PVD +G+ DY +VI++P DF TI+ + T
Sbjct: 431 IIGILMKDSRS-----KW---FREPVDPIKMGIPDYNDVIKQPRDFGTIEKSLAAGKFTH 482
Query: 90 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 149
+ V + D++LVFKNAM YN+E DV+ +A+ L + +++ + K Q E
Sbjct: 483 FSMV---HNDIKLVFKNAMTYNEEESDVYELAEELEKVYDDLF----------RKAQLES 529
Query: 150 EAKAQLDMQLTQE 162
EA+AQL ++ ++
Sbjct: 530 EAEAQLQAEIIKD 542
>gi|403371115|gb|EJY85437.1| hypothetical protein OXYTRI_16702 [Oxytricha trifallax]
Length = 277
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 13/110 (11%)
Query: 16 KKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDF 75
+ L+E G K+ +LL + SF PF+ PV+ E LGLHDY VI+KPMD
Sbjct: 26 RNLIEDGHKDSLRNLLNDLKKDQNSF--------PFLEPVNWEVLGLHDYPTVIKKPMDM 77
Query: 76 STIKNKMD-GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSL 124
T+K +D G+ YR EI+AD++L++ N YN ++ +A+++
Sbjct: 78 LTVKKNLDKGR----YRYFEEIFADIQLIWSNCKTYNVSGSEIFRLAENM 123
>gi|396081966|gb|AFN83580.1| putative bromodomain-containing transcription factor
[Encephalitozoon romaleae SJ-2008]
Length = 370
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 24/224 (10%)
Query: 34 FVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 93
+ Q + I ++ A PF+ PVD LG+ DY E I+ PMD STI+ K+D K+ +G
Sbjct: 19 YCSQVLTRIKRNSNAPPFLEPVDPVKLGIPDYPEKIKNPMDLSTIRKKLDAKEYSGPEGF 78
Query: 94 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKA 153
+ D++L+F N YN VH M K+L + + + +V ++ K+ E
Sbjct: 79 DD---DMKLMFNNCYTYNPPGTIVHDMGKALESAYNDMMAGMPQEVSKKRKKSEIPVTGR 135
Query: 154 QLDMQLTQEAVQTNKAK--ELRSE-----------------LNEVDMQLENLRETVIQKC 194
++ + V+ KA+ E SE L VD L +VI++
Sbjct: 136 SKQVKRNAKPVEGMKAEDYEFCSEVLSDLVKPKHKSYNWPFLEPVDGDLVPGYYSVIKE- 194
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEV 238
M + KN S E+ + LE++ EN F+A EV
Sbjct: 195 -PMDIQTMKNKLDQRKYHSVEEFGRDLELIVENCKKFNAPGTEV 237
>gi|449276532|gb|EMC85004.1| Tyrosine-protein kinase BAZ1B, partial [Columba livia]
Length = 1287
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 61/99 (61%), Gaps = 9/99 (9%)
Query: 40 SFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
S + +++++WPF PV E DY+EVI PMDF T+++K + YR+V+E AD
Sbjct: 1154 SKLIKYRFSWPFREPVTTEEA--EDYFEVISNPMDFQTMQSKCSCGN---YRSVQEFLAD 1208
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
++ VF NA +YN ++ HV+ S LEK E+ + ++ K
Sbjct: 1209 MKQVFSNAERYN--QNGSHVL--SCLEKTEQCLIDMVHK 1243
>gi|147776966|emb|CAN63414.1| hypothetical protein VITISV_007685 [Vitis vinifera]
Length = 923
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 78/136 (57%), Gaps = 8/136 (5%)
Query: 51 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKNAMK 109
+ PVD E L DY++VIE PMDF+T++ K+ G G YR E +DV L+ NAM+
Sbjct: 197 YAEPVDPEEL--PDYHDVIEHPMDFATVRKKL----GNGSYRTFEEFESDVFLICTNAMQ 250
Query: 110 YNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNK- 168
YN H A+++ E +K+ +L + EK + E ++ +L + +++ ++ +
Sbjct: 251 YNAPDTIYHKQARAIQELARKKFQKLRIDIGRSEKELKSERSEKELKSERSEKELKPERF 310
Query: 169 AKELRSELNEVDMQLE 184
KEL+SE +E +++ E
Sbjct: 311 EKELKSERSEKELKPE 326
>gi|119604878|gb|EAW84472.1| bromodomain containing 4, isoform CRA_c [Homo sapiens]
Length = 146
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK +++ Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENN---YY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDV 117
N +E D +F N YN R +
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKFRPQM 146
>gi|389751720|gb|EIM92793.1| Bromodomain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 802
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 43 TQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRL 102
+ H PF PVD LG+ DY ++I+KPMD ST++ K++ Y + D +L
Sbjct: 444 SHHTIVAPFAQPVDPISLGIPDYPKIIKKPMDLSTMRTKLESGQ---YASADRFRDDFKL 500
Query: 103 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ N YN + VH L + FEEKW +
Sbjct: 501 MISNCFAYNSDTSPVHKAGVELQKLFEEKWGHM 533
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG-------KDGTG--YRNVREI 96
K A PF PVD L + Y +VI++PMDFSTI+ K+ D T Y N E
Sbjct: 238 KDAGPFKFPVDPLALNIPHYPQVIKEPMDFSTIERKLASSNPVKPDPDPTHARYYNAEEF 297
Query: 97 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
DVR +F+N + +N + + + F+++ Q+
Sbjct: 298 ITDVRRIFQNCLTFNGPDHAITQSGRRVEATFDKQIKQM 336
>gi|300701921|ref|XP_002995060.1| hypothetical protein NCER_102192 [Nosema ceranae BRL01]
gi|239603745|gb|EEQ81389.1| hypothetical protein NCER_102192 [Nosema ceranae BRL01]
Length = 368
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 72/128 (56%), Gaps = 8/128 (6%)
Query: 24 KNLSASLLQF---FVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKN 80
++L SLL+ + Q + +++ A+PF+ PVD G+ DY I+ PMD ST+K
Sbjct: 2 QDLDTSLLEHQMKYCGQILQKLKRNQNAFPFLEPVDPIKYGIPDYPLKIKYPMDLSTVKK 61
Query: 81 KMDGKDGTGYRNVREIY-ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV 139
K+D K N E++ +D++L+F N YN DV+++ K L E ++E + L ++
Sbjct: 62 KLDSK----VYNTPEMFDSDIKLMFNNCYTYNHPSSDVYLLGKKLEEYYDELFALLPMEI 117
Query: 140 MEEEKRQE 147
++ KR E
Sbjct: 118 SKKRKRPE 125
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 68/116 (58%), Gaps = 16/116 (13%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+ WPF+ PVD E L L YYE+I+ PMD +IK+K+D K Y+ V E D+RL+ +N
Sbjct: 167 FVWPFLEPVD-ENL-LPQYYEIIKNPMDLKSIKDKLDLK---SYKGVDEFSNDLRLITEN 221
Query: 107 AMKYNDERDDVHV-------MAKSLLEKFEEKWLQLLPKVMEEEKR--QEEEEAKA 153
K+ND+ DV+ + SLL +E K L+ +++E +K+ Q +E KA
Sbjct: 222 CHKFNDQGSDVYRCGTELNELVNSLLANYEPKDLK--GRILELKKKIVQYTKEVKA 275
>gi|443893835|dbj|GAC71291.1| histone acetyltransferase SAGA/ADA, catalytic subunit PCAF/GCN5
[Pseudozyma antarctica T-34]
Length = 742
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 8/95 (8%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H AWPF++PV+ G + DYYEVI+ PMD ST++ K++ Y NV E+ AD +L+F
Sbjct: 652 HGSAWPFVNPVN--GDEVTDYYEVIKNPMDLSTMEAKLENNQ---YANVDELTADAQLIF 706
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV 139
N YN + + + LEKF ++ LLPKV
Sbjct: 707 DNCRAYNPASSP-YAKSATKLEKFLKE--TLLPKV 738
>gi|429962983|gb|ELA42527.1| hypothetical protein VICG_00279 [Vittaforma corneae ATCC 50505]
Length = 379
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
A PF+ PVD LG+ DY E I+ PMD ST+K+K+D K Y+ E ++D+ L+F N
Sbjct: 50 AGPFLKPVDPIALGIPDYPEKIKHPMDISTVKHKLDTK---TYKIPDEFHSDMTLMFNNC 106
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQL 135
YN V+ M K L + FE + L
Sbjct: 107 YTYNQPDSVVYNMGKDLQKAFESLYADL 134
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 97/216 (44%), Gaps = 39/216 (18%)
Query: 46 KWAWPFMHPV---DVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRL 102
K++WPF++PV D G Y+ +I +P D STI+NK D + Y + E D+ L
Sbjct: 186 KYSWPFLYPVTEQDAPG-----YFSIITQPTDLSTIRNKFDMR---RYSSASEFVTDLNL 237
Query: 103 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQE 162
+ N K+N +V+ E+F + L+ K + + R
Sbjct: 238 MISNCFKFNKPDSEVYKCG----EEFNKVIQSLIHKGKDVDSR----------------- 276
Query: 163 AVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALE 222
E+R +++ ++ +L L + K R + +++ +G A+ ++ + K E
Sbjct: 277 ------IAEIRRKISILNQELRMLEQQQTNKTR-YTLSDREKIGKAIIHMTKKQTEKVSE 329
Query: 223 IVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQ 258
IV +++ + E++++++ + + + +VQ
Sbjct: 330 IVHKHSAYDYVDNDEIEINLETMPDFVVGEIYEYVQ 365
>gi|312070279|ref|XP_003138073.1| bromodomain containing protein [Loa loa]
Length = 1342
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
AWPF+ PVD + + DYY++I++PMD TI NK+ + Y ++ AD RL+F+N
Sbjct: 1248 AWPFLKPVDAKTVP--DYYQIIKRPMDLRTIMNKLKQR---LYDTPDQVIADARLIFENC 1302
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
YN+E ++ A L E EE++ ++L
Sbjct: 1303 RIYNEEESEICKCATKLEEFMEERFSKVL 1331
>gi|340505568|gb|EGR31885.1| hypothetical protein IMG5_100340 [Ichthyophthirius multifiliis]
Length = 475
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 41 FITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 100
I++ K + F PVDV +HDYY+++++PMD TIKNK+ + Y + +E DV
Sbjct: 388 IISKAKGCYLFQQPVDVVKYQIHDYYDIVKRPMDLGTIKNKL---NCNVYESCKEFIEDV 444
Query: 101 RLVFKNAMKYNDERDDVHVMAKSL---LEKF 128
LVF N + YN +V + L LEK+
Sbjct: 445 ELVFYNCILYNGSDSEVGKFVQILNKNLEKY 475
>gi|334183397|ref|NP_001185257.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
gi|332195365|gb|AEE33486.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
Length = 582
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
I + + A PF PV+ E LG+ DY+++I+ PMDF TI N + G Y N ++Y DV
Sbjct: 226 IMKMEAADPFNVPVNPEALGIPDYFDIIKTPMDFGTICNNFE--KGNKYMNSEDVYKDVN 283
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
++ N KYN + D + + K + + F + W
Sbjct: 284 YIWNNCSKYNKKGDYIVDLMKRVKKNFMKYW 314
>gi|393906187|gb|EFO26002.2| bromodomain containing protein [Loa loa]
Length = 1381
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
AWPF+ PVD + + DYY++I++PMD TI NK+ + Y ++ AD RL+F+N
Sbjct: 1287 AWPFLKPVDAKTVP--DYYQIIKRPMDLRTIMNKLKQR---LYDTPDQVIADARLIFENC 1341
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
YN+E ++ A L E EE++ ++L
Sbjct: 1342 RIYNEEESEICKCATKLEEFMEERFSKVL 1370
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.128 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,824,487,658
Number of Sequences: 23463169
Number of extensions: 200755524
Number of successful extensions: 2421847
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7331
Number of HSP's successfully gapped in prelim test: 9362
Number of HSP's that attempted gapping in prelim test: 1936610
Number of HSP's gapped (non-prelim): 331838
length of query: 322
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 180
effective length of database: 9,027,425,369
effective search space: 1624936566420
effective search space used: 1624936566420
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 77 (34.3 bits)