BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020702
(322 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84XV2|GTE1_ARATH Transcription factor GTE1 OS=Arabidopsis thaliana GN=GTE1 PE=2 SV=1
Length = 386
Score = 358 bits (919), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 176/291 (60%), Positives = 226/291 (77%), Gaps = 12/291 (4%)
Query: 27 SASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 86
S L++ F R I QHKWAWPF+ PVDV+GLGLHDYY+VIEKPMD TIK KM+ +
Sbjct: 107 SPDLMRQFATMFRQ-IAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSE 165
Query: 87 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQ 146
Y NVREIYADVRLVFKNAM+YN+E++DV+VMA+SLLEKFEEKWL ++PK++EEEK+Q
Sbjct: 166 ---YSNVREIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQ 222
Query: 147 EEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLG 206
+EEA+ + QLT EA Q A++L +EL E+D+QLE LRE+V+Q+CRK+ST+EKK L
Sbjct: 223 VDEEAEKHANKQLTMEAAQAEMARDLSNELYEIDLQLEKLRESVVQRCRKLSTQEKKGLS 282
Query: 207 TALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 266
AL RLSPEDL KAL++V+E+NPSF A A EV+LD+D Q+++TLWRLKVFVQE+LKAA++
Sbjct: 283 AALGRLSPEDLSKALKMVSESNPSFPAGAPEVELDIDVQTDVTLWRLKVFVQEALKAANK 342
Query: 267 SSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRTKK 317
SSG NNNN + + NKNN KR++EI DA+ K ++KR KK
Sbjct: 343 SSGGTNAQNNNNT--------GTGEINKNNAKRRREISDAINKASIKRAKK 385
>sp|Q9FT54|GTE6_ARATH Transcription factor GTE6 OS=Arabidopsis thaliana GN=GTE6 PE=2 SV=1
Length = 369
Score = 262 bits (670), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/223 (60%), Positives = 171/223 (76%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
ITQHK AWPFMHPV+VEGLGLHDY+EVI+KPMDFSTIKN+M+ KDGTGY++V +IYAD+R
Sbjct: 105 ITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKDGTGYKHVMQIYADMR 164
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
LVF+NAM YN+E DV+ MAK LLEKFEEKW LPKV EEEK +EEEE +A + L +
Sbjct: 165 LVFENAMNYNEETSDVYSMAKKLLEKFEEKWAHFLPKVQEEEKIREEEEKQAAKEALLAK 224
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKAL 221
EA +EL +E+ + +LE L V+++CRK++ EEK+N+G AL +LSP+DL K L
Sbjct: 225 EASHIKTTRELGNEICHANDELEKLMRKVVERCRKITIEEKRNIGLALLKLSPDDLQKVL 284
Query: 222 EIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAA 264
IVA+ NPSF A+EV ++MD E TLWRLK FV+++L A
Sbjct: 285 GIVAQANPSFQPRAEEVSIEMDILDEPTLWRLKFFVKDALDNA 327
>sp|Q9LNC4|GTE4_ARATH Transcription factor GTE4 OS=Arabidopsis thaliana GN=GTE4 PE=2 SV=1
Length = 766
Score = 114 bits (285), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 118/245 (48%), Gaps = 38/245 (15%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVDV+GLGL DYY +IE PMD TIK+ + Y++ RE DVR
Sbjct: 432 LMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALMK---NLYKSPREFAEDVR 488
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L F NAM YN E DVH+MA +LL+ FEE+W V+E + +E +M L
Sbjct: 489 LTFHNAMTYNPEGQDVHLMAVTLLQIFEERW-----AVIEADYNREMRFVTG-YEMNLPT 542
Query: 162 EAVQTNKAKEL-------RSELNEVD---------------MQLENLRETVIQKC----- 194
+++ + R+ ++ D + R ++K
Sbjct: 543 PTMRSRLGPTMPPPPINVRNTIDRADWSNRQPTTTPGRTPTSATPSGRTPALKKPKANEP 602
Query: 195 --RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWR 252
R M+ EEK+ L L L P+ L ++IV + N + +E+++D+D+ TLW
Sbjct: 603 NKRDMTYEEKQKLSGHLQNLPPDKLDAIVQIVNKRNTAVKLRDEEIEVDIDSVDPETLWE 662
Query: 253 LKVFV 257
L FV
Sbjct: 663 LDRFV 667
>sp|Q5TJG6|BRD2_CANFA Bromodomain-containing protein 2 OS=Canis familiaris GN=BRD2 PE=3
SV=1
Length = 803
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 192 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFH-ATAQEVDLDMDAQSELTL 250
++ R MS +EK+ L + +L E L + + I+ PS + +E+++D + TL
Sbjct: 639 EESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTL 698
Query: 251 WRLKVFVQESLKAASR 266
L+ +V L+ R
Sbjct: 699 RELERYVLSCLRKKPR 714
>sp|Q32S26|BRD2_BOVIN Bromodomain-containing protein 2 OS=Bos taurus GN=BRD2 PE=3 SV=1
Length = 803
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 192 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFH-ATAQEVDLDMDAQSELTL 250
++ R MS +EK+ L + +L E L + + I+ PS + +E+++D + TL
Sbjct: 639 EESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTL 698
Query: 251 WRLKVFVQESLKAASR 266
L+ +V L+ R
Sbjct: 699 RELERYVLSCLRKKPR 714
>sp|Q6MGA9|BRD2_RAT Bromodomain-containing protein 2 OS=Rattus norvegicus GN=Brd2 PE=2
SV=1
Length = 798
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 367 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 423
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 424 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 452
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 78 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 134
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 135 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 192 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFH-ATAQEVDLDMDAQSELTL 250
++ R MS +EK+ L + +L E L + + I+ PS + +E+++D + TL
Sbjct: 635 EESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTL 694
Query: 251 WRLKVFVQESLKAASR 266
L+ +V L+ R
Sbjct: 695 RELERYVLSCLRKKPR 710
>sp|Q7JJ13|BRD2_MOUSE Bromodomain-containing protein 2 OS=Mus musculus GN=Brd2 PE=1 SV=1
Length = 798
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 367 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 423
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 424 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 452
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 78 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 134
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 135 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 192 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFH-ATAQEVDLDMDAQSELTL 250
++ R MS +EK+ L + +L E L + + I+ PS + +E+++D + TL
Sbjct: 635 EESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTL 694
Query: 251 WRLKVFVQESLKAASR 266
L+ +V L+ R
Sbjct: 695 RELERYVLSCLRKKPR 710
>sp|P25440|BRD2_HUMAN Bromodomain-containing protein 2 OS=Homo sapiens GN=BRD2 PE=1 SV=2
Length = 801
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 368 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 424
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN DV MA+ L + FE ++ ++
Sbjct: 425 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 453
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H++AWPF PVD LGL DY+++I++PMD TIK ++ + Y
Sbjct: 79 LQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL---ENNYY 135
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
E D +F N YN DD+ +MA++L + F +K
Sbjct: 136 WAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 192 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFH-ATAQEVDLDMDAQSELTL 250
++ R MS +EK+ L + +L E L + + I+ PS + +E+++D + TL
Sbjct: 637 EESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTL 696
Query: 251 WRLKVFVQESLKAASR 266
L+ +V L+ R
Sbjct: 697 RELERYVLSCLRKKPR 712
>sp|P13709|FSH_DROME Homeotic protein female sterile OS=Drosophila melanogaster
GN=fs(1)h PE=1 SV=2
Length = 2038
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E AD
Sbjct: 492 FSKKHSGYAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAAD 548
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN DV M + L + FE ++ +
Sbjct: 549 VRLIFTNCYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ ++ I +H ++WPF PVD + L L DY+++I++PMD TIK +++ Y
Sbjct: 39 LQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLENNY---Y 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
+ +E D +F N YN +DV VMA++L + F +K ++ +PK
Sbjct: 96 WSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IESMPK 142
>sp|O60885|BRD4_HUMAN Bromodomain-containing protein 4 OS=Homo sapiens GN=BRD4 PE=1 SV=2
Length = 1362
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 365 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGAD 421
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 422 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.1 bits (87), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>sp|Q9ESU6|BRD4_MOUSE Bromodomain-containing protein 4 OS=Mus musculus GN=Brd4 PE=1 SV=1
Length = 1400
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 41 FITQHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 99
F +H +AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E AD
Sbjct: 366 FAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGAD 422
Query: 100 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
VRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 423 VRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ +R + +H++AWPF PVD L L DYY++I+ PMD TIK ++ + Y
Sbjct: 63 LQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL---ENNYY 119
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 120 WNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.1 bits (87), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 193 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 251
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 252 RLKVFVQESLK 262
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>sp|Q9S7T1|GTE3_ARATH Transcription factor GTE3, chloroplastic OS=Arabidopsis thaliana
GN=GTE3 PE=1 SV=1
Length = 461
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 127/278 (45%), Gaps = 35/278 (12%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +HK W F PVDV LGLHDY+ +I++PMD T+K ++ + Y++ E DVR
Sbjct: 130 LMKHKSGWIFNTPVDVVTLGLHDYHNIIKEPMDLGTVKTRLSK---SLYKSPLEFAEDVR 186
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ--- 158
L F NAM YN DV+ MA+ LL FEEKW+ P + E +++ +D
Sbjct: 187 LTFNNAMLYNPVGHDVYHMAEILLNLFEEKWV---PLETQYELLIRKQQPVRDIDFHAPV 243
Query: 159 ----------------------LTQEAVQTNKAKELRSELNEV-DMQLENLRETVIQKC- 194
+ V+ + S N V L + E ++++
Sbjct: 244 STNTHNVEALPLPAPTPSLSPPPPPKVVENRTLERAESMTNPVKPAVLPVVPEKLVEEAS 303
Query: 195 --RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWR 252
R ++ +EK+ L L L + L ++I+ + P E++LD+D+ TLW
Sbjct: 304 ANRDLTFDEKRQLSEDLQDLPYDKLEAVVQIIKKRTPELSQQDDEIELDIDSLDLETLWE 363
Query: 253 LKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSN 290
L FV E ++ S+ + G ++ + + +N SN
Sbjct: 364 LFRFVTEYKESLSKKKEEQGLDSERDAESFHNSVHESN 401
>sp|Q9LXA7|GTE2_ARATH Transcription factor GTE2 OS=Arabidopsis thaliana GN=GTE2 PE=2 SV=2
Length = 581
Score = 97.8 bits (242), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 8 SSKMHFIGKKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYE 67
S K H + E K++ + Q V+ + +HKW+W F++PVDV GLGLHDY+
Sbjct: 156 SLKRHVALDLMSEKVLKSMMTTCGQILVK-----LMKHKWSWVFLNPVDVVGLGLHDYHR 210
Query: 68 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 127
+++KPMD T+ KM+ + G YR+ + +DVRL F NAM YN + DV++MA+ LL +
Sbjct: 211 IVDKPMDLGTV--KMNLEKGL-YRSPIDFASDVRLTFTNAMSYNPKGQDVYLMAEKLLSQ 267
Query: 128 FE 129
F+
Sbjct: 268 FD 269
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
R+M+ +EK LG L L PE L + ++I+ + E++LD++A TLW L
Sbjct: 397 REMTMDEKGKLGVNLQELPPEKLGQLIQILRKRTRDLPQDGDEIELDIEALDNETLWELD 456
Query: 255 VFVQESLKAASR 266
FV K AS+
Sbjct: 457 RFVTNYRKMASK 468
>sp|Q91Y44|BRDT_MOUSE Bromodomain testis-specific protein OS=Mus musculus GN=Brdt PE=1
SV=3
Length = 956
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVD + LGLH+YY+V++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 290 YAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQE---YKDAYEFAADVRLMFMN 346
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
KYN +V MA++L + FE
Sbjct: 347 CYKYNPPDHEVVAMARTLQDVFE 369
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF R + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 31 LQFLQRVVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLENK---YY 87
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ VMA++L + F +K Q+
Sbjct: 88 EKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALEKLFMQKLSQM 132
>sp|D4A7T3|BRDT_RAT Bromodomain testis-specific protein OS=Rattus norvegicus GN=Brdt
PE=1 SV=1
Length = 952
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV+ LGLH+YY++++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 290 YAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIKGKMDKQE---YKDACEFAADVRLMFMN 346
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE + ++
Sbjct: 347 CYKYNPPDHEVVTMARMLQDVFEMHFAKI 375
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQF R + +H ++WPF PVD L L DYY +IE PMD STIK +++ + Y
Sbjct: 31 LQFLQRVVLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLENR---YY 87
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ VMA++L + F +K Q+
Sbjct: 88 EKASECVGDFNTMFSNCYLYNKPGDDIVVMAQALEKLFMQKLSQM 132
>sp|Q15059|BRD3_HUMAN Bromodomain-containing protein 3 OS=Homo sapiens GN=BRD3 PE=1 SV=1
Length = 726
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMDG++ Y + + ADVRL+F N
Sbjct: 330 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGRE---YPDAQGFAADVRLMFSN 386
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
KYN +V MA+ L + FE ++ ++
Sbjct: 387 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 39 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 95
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 197 MSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFH-ATAQEVDLDMDAQSELTLWRLKV 255
MS +EK+ L + RL E L + + I+ PS + E+++D + TL L+
Sbjct: 572 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 631
Query: 256 FVQESLKAASRSSGDMGG 273
+V+ L+ R G
Sbjct: 632 YVKSCLQKKQRKPFSASG 649
>sp|Q4R8Y1|BRDT_MACFA Bromodomain testis-specific protein OS=Macaca fascicularis GN=BRDT
PE=2 SV=3
Length = 947
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 291 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 347
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 348 CYKYNPPDHEVVTMARMLQDVFETHFSKIPVEPVESMPLCYIKTDITETTGRENTNEASS 407
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 408 EGNSSGDSEDERVQRLAKLQEQLKAVHQQLQVLSQVPFRK 447
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 32 LQYLQKVVLKDLWKHSFSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLENK---YY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 89 VKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFVQKLSQM 133
>sp|Q58F21|BRDT_HUMAN Bromodomain testis-specific protein OS=Homo sapiens GN=BRDT PE=1
SV=4
Length = 947
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF +PVDV LGLH+YY+V++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 291 YAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 347
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 153
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 348 CYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASS 407
Query: 154 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 193
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 408 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRK 447
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++ K Y
Sbjct: 32 LQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLENK---YY 88
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 89 AKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 133
>sp|Q7Y214|GTE7_ARATH Transcription factor GTE7 OS=Arabidopsis thaliana GN=GTE7 PE=2 SV=1
Length = 590
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 65/113 (57%), Gaps = 12/113 (10%)
Query: 17 KLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFS 76
KLL G S L++ + +HKWAW F PVDV GLGLHDY++V++KPMD
Sbjct: 164 KLLAGMLNTCSQILVK---------LMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLG 214
Query: 77 TIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 129
T+K + D Y + + DVRL F NAM YN + DV+ MA LL+ F+
Sbjct: 215 TVKLNL---DKGFYVSPIDFATDVRLTFDNAMTYNPKGQDVYFMADKLLDHFD 264
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
R M+ EEK LG L L PE L + L+I+ + N E++LD++A TLW L
Sbjct: 402 RLMTMEEKSKLGMNLQDLPPEKLGQLLQILRKRNGHLAQDGDEIELDIEAVDNETLWELD 461
Query: 255 VFVQESLKAASR 266
FV K AS+
Sbjct: 462 RFVTNYKKMASK 473
>sp|Q93YS6|GTE9_ARATH Transcription factor GTE9 OS=Arabidopsis thaliana GN=GTE9 PE=1 SV=1
Length = 688
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 109/223 (48%), Gaps = 17/223 (7%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ H++ W F PVDV L + DY+ VIE PMD T+KNK+ GT Y E ADVR
Sbjct: 148 LMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKL--TSGT-YSCPSEFAADVR 204
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 161
L F NAM YN +DV+VMA +L + FE +W L K+ + E A + +
Sbjct: 205 LTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKLSGTKVHTEPSNLDAHKEKHIVI 264
Query: 162 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKK-NLGTALTRLSPEDLCKA 220
K K VD E V+ +++ T+E + LG L L+ E +
Sbjct: 265 PVPMAKKRK-----TTAVDC------ENVVDPAKRVMTDEDRLKLGKDLESLT-EFPAQL 312
Query: 221 LEIVAENNPSFHATA-QEVDLDMDAQSELTLWRLKVFVQESLK 262
+ + ++N + E+++D++ S+ L++L+ + E L+
Sbjct: 313 INFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLRDLLDEHLR 355
>sp|Q8K2F0|BRD3_MOUSE Bromodomain-containing protein 3 OS=Mus musculus GN=Brd3 PE=1 SV=2
Length = 726
Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 329 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDSRE---YPDAQGFAADIRLMFSN 385
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 141
KYN +V MA+ L + FE ++ ++ + ME
Sbjct: 386 CYKYNPPDHEVVAMARKLQDVFEMRFAKMPDEPME 420
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y
Sbjct: 38 LQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYY 94
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 95 WSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 139
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 197 MSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFH-ATAQEVDLDMDAQSELTLWRLKV 255
MS +EK+ L + RL E L + + I+ PS + E+++D + TL L+
Sbjct: 573 MSYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELER 632
Query: 256 FVQESLKAASRSSGDMGG 273
+V+ L+ R G
Sbjct: 633 YVKSCLQKKQRKPLSTSG 650
>sp|F1QW93|BRDT_DANRE Bromodomain testis-specific protein OS=Danio rerio GN=brdt PE=2
SV=2
Length = 918
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 75/132 (56%), Gaps = 10/132 (7%)
Query: 5 LRSSSKMHFIGKKL-LEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLH 63
L S H +G++ L K +A L + F ++ ++ AWPF PVD E LGL
Sbjct: 254 LPESPPQHQVGRRTKLSERLKYCNAILKEMFSKKHSAY------AWPFYKPVDAETLGLL 307
Query: 64 DYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKS 123
DY+E+I +PMD STIK KM+ ++ Y + + AD+RL+F N KYN +V MA+
Sbjct: 308 DYHEIIHQPMDMSTIKKKMEARE---YTDALQFAADMRLMFSNCYKYNPPGHEVVSMARK 364
Query: 124 LLEKFEEKWLQL 135
L + FE ++ ++
Sbjct: 365 LQDVFEFRFSKI 376
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY +I+ PMD +TI+ ++ + Y
Sbjct: 34 LQYIEKVVIRALWKHHFSWPFRQPVDAVRLNLPDYYTIIKNPMDLTTIRKRL---ENNYY 90
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
E D +F N YN DD+ +MA+ L + F EK ++
Sbjct: 91 WKAMECVEDFNTMFTNCYVYNRPGDDIVLMAQVLEKLFLEKVAEM 135
>sp|Q8H1D7|GTE5_ARATH Transcription factor GTE5, chloroplastic OS=Arabidopsis thaliana
GN=GTE5 PE=1 SV=1
Length = 487
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 11/124 (8%)
Query: 15 GKKLLEGGCKNLSASLLQFFVRQARSFITQ---HKWAWPFMHPVDVEGLGLHDYYEVIEK 71
GKK G K +Q F + S +T+ HK AW F PVD +GLGLHDY+ ++++
Sbjct: 118 GKKSGHGADKGT----VQIF-KNCNSLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKE 172
Query: 72 PMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
PMD T+K K+ GK + Y++ + DVRL F NA+ YN DV+ A+ LL FE+K
Sbjct: 173 PMDLGTVKTKL-GK--SLYKSPLDFAEDVRLTFNNAILYNPIGHDVYRFAELLLNMFEDK 229
Query: 132 WLQL 135
W+ +
Sbjct: 230 WVSI 233
Score = 39.3 bits (90), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 195 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 254
R ++ EEK+ L L L + L ++I+ ++NP E++LD+D+ TLW L
Sbjct: 328 RDLTLEEKRRLSEELQDLPYDKLETVVQIIKKSNPELSQKDDEIELDIDSLDINTLWELY 387
Query: 255 VFV---QESLKAASRSSG 269
FV +ESL + + G
Sbjct: 388 RFVTGYKESLSKKNEAHG 405
>sp|Q9LK27|GTE8_ARATH Transcription factor GTE8 OS=Arabidopsis thaliana GN=GTE8 PE=2 SV=2
Length = 813
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 39/232 (16%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLV 103
H +W F PVDV L + DY I+ PMD T+K + +G Y + E ADVRL
Sbjct: 190 HPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNL----ASGVYSSPHEFAADVRLT 245
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKW-----------LQLLPKVMEEEKRQEEEEAK 152
F NAM YN DVH+M L + FE +W +Q LP V E +E K
Sbjct: 246 FTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKLPPCSMQTLPAVTLEPN----DERK 301
Query: 153 AQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTE-EKKNLGTALTR 211
A + +V K +++ S +RE+V + + + TE E+ LG L
Sbjct: 302 AAI-------SVPPAKKRKMASP----------VRESVPEPVKPLMTEVERHRLGRQLES 344
Query: 212 LSPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLKVFVQESLK 262
L E ++ + ++N + A+ E+++D+D S+ L L+ + E ++
Sbjct: 345 LLDELPAHIIDFLKKHNSNGGEIAEDEIEIDIDVLSDEVLVTLRNLLDEYIQ 396
>sp|Q9LS28|GTE12_ARATH Transcription factor GTE12 OS=Arabidopsis thaliana GN=GTE12 PE=2
SV=2
Length = 494
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 41 FITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 100
F+ +H+ W F PVD + + DY+ VI+KPMD T+K+K+ Y N E ADV
Sbjct: 79 FLMEHRGGWLFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLK---NVYSNADEFAADV 135
Query: 101 RLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
RL F NAM YN ++VH +AK + E FE +W L+ K
Sbjct: 136 RLTFANAMHYNPLWNEVHTIAKEINEIFEVRWESLMKK 173
>sp|Q54BA2|Y3800_DICDI Ankyrin repeat, bromo and BTB domain-containing protein
DDB_G0293800 OS=Dictyostelium discoideum GN=DDB_G0293800
PE=4 SV=1
Length = 806
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K + F PVD G+ DY++VI+ PMD TIK K+D GY +++ ADVRL+F+
Sbjct: 536 KTSLAFQRPVDPLAEGIPDYFDVIKHPMDLGTIKGKLDN---NGYSTIKDFAADVRLMFE 592
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 137
NA+ YN + V AK+LL F++K+LQ P
Sbjct: 593 NALTYNADSSPVWKHAKTLLNAFDQKFLQNFP 624
>sp|Q55C84|Y0170_DICDI Bromodomain-containing protein DDB_G0270170 OS=Dictyostelium
discoideum GN=DDB_G0270170 PE=4 SV=1
Length = 1578
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 64/108 (59%), Gaps = 10/108 (9%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
+H+ + PF+ VD LG+ DY++VI+ PMD TIK + G GY + + D RLV
Sbjct: 753 EHQHSPPFLVAVDPYALGILDYFDVIKHPMDLGTIKASLIGG---GYDTIDKFAEDCRLV 809
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL-------PKVMEEEK 144
F NA YN + VH+MA+SL + FE+ + ++L PK +++EK
Sbjct: 810 FSNAKTYNPSTNPVHIMAQSLEDVFEKGFPKVLIEPPSPPPKNVDQEK 857
>sp|Q9FGW9|GTE10_ARATH Transcription factor GTE10 OS=Arabidopsis thaliana GN=GTE10 PE=1
SV=2
Length = 1061
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 14/224 (6%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
HK WPF PVD L + DY+ VI+ PMD TI++++ + Y + + ADVRL F
Sbjct: 175 HKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGE---YSSPLDFAADVRLTF 231
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAV 164
N++ YN + H MA+ + + FE W + K+ + + A L+ ++ E
Sbjct: 232 SNSIAYNPPGNQFHTMAQGISKYFESGWKSIEKKIPMSKPPVIPLTSSASLESEIPFEVA 291
Query: 165 QTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIV 224
K + + +N+ +++E + M+ EKK LG L L + K +++
Sbjct: 292 PMRKKE---AAMNDNKLRVEPAKLV-------MTDGEKKKLGQDLMALEEDFPQKIADLL 341
Query: 225 AENNPSFHATAQ-EVDLDMDAQSELTLWRLKVFVQESLKAASRS 267
E + S + + E+++D++A S+ L+ ++ + + L+ +S
Sbjct: 342 REQSGSDGQSGEGEIEIDIEALSDEILFMVRKLLDDYLREKKKS 385
>sp|Q9Y7N0|BDF1_SCHPO SWR1 complex bromodomain subunit bdf1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=bdf1 PE=1 SV=1
Length = 578
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 114/255 (44%), Gaps = 40/255 (15%)
Query: 27 SASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 86
S L + + RQ SF A+PF PVD DY++VI++PMD STI++K++ +
Sbjct: 261 STVLKELYKRQYESF------AFPFYQPVDPVACDCPDYFDVIKEPMDLSTIQSKLNKNE 314
Query: 87 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE-KR 145
Y + E +D+ L+F N YN VHVM + L F+EKW + PK + +
Sbjct: 315 ---YSTLEEFESDILLMFNNCFTYNPPGTPVHVMGRQLENVFKEKW-EARPKFDDATLVK 370
Query: 146 QEEEEAKAQLD----MQLTQEAVQTNKAKELRSELNEVDMQLENLRETV-IQKCRKMS-- 198
Q+E E A D + + N AK VD Q+ L++T+ K +KM+
Sbjct: 371 QQEAETDALFDNGEEEEALMSEEEINGAK-----FAAVDKQISMLQDTLEAMKAKKMNRM 425
Query: 199 --------TEEKKNLGTAL--------TRLSPEDLCKALEIVAENNPSFHATAQEVDLDM 242
T+E + A+ LS E L EI+ E P T E+++D+
Sbjct: 426 RKPRRRDLTKEYGPITYAMQNELAERCNYLSAEQLSNVAEILREEMPWLRDT-DEIEIDV 484
Query: 243 DAQSELTLWRLKVFV 257
R+ +V
Sbjct: 485 GNMKPEVFHRIYRYV 499
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 7/120 (5%)
Query: 16 KKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDF 75
KK+ G VRQ + + K + PF PVD + DY +++ PMD
Sbjct: 78 KKIRGSGMPPPQQKYCLAIVRQ----LKRTKNSAPFKVPVDPIKQNIPDYPTIVKNPMDL 133
Query: 76 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
TI+ K+ + Y +E D+ L+F N YN V M K+L E FE + QL
Sbjct: 134 GTIEKKLTSYE---YSVPQEFIDDMNLMFSNCFLYNGTESPVGSMGKALQEVFERQLKQL 190
>sp|Q93ZB7|GTE11_ARATH Transcription factor GTE11 OS=Arabidopsis thaliana GN=GTE11 PE=1
SV=1
Length = 620
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 44 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 103
QH W F PVDV L + DY+ +I+ PMD T+K+K+ GT Y + E ADVRL
Sbjct: 144 QH--CWLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKL--TSGT-YSSPSEFSADVRLT 198
Query: 104 FKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
F+NAM YN ++V+ A +L + FE +W
Sbjct: 199 FRNAMTYNPSDNNVYRFADTLSKFFEVRW 227
>sp|Q07442|BDF2_YEAST Bromodomain-containing factor 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BDF2 PE=1 SV=1
Length = 638
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 42/240 (17%)
Query: 49 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK-MDGKDGTGYRNVREIYADVRLVFKNA 107
+PF+ PVD L L +Y++V++ PMD TI N M+ K Y+ + + D+ LVF N
Sbjct: 343 FPFLQPVDPIALNLPNYFDVVKNPMDLGTISNNLMNWK----YKTIDQFVDDLNLVFYNC 398
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQ---LLPKV-----MEEEKRQEEEEAKAQLDMQL 159
++N E ++VH M K L E F WL+ +L ++ +EE+ + + D +
Sbjct: 399 FQFNPEGNEVHSMGKKLKELFNFHWLENQDILNEIETDSDLEEDNYSSSYSSDDEYDDED 458
Query: 160 TQEAVQTNKA-KELRSELNEVDMQLENLRETVIQKCRKMSTEEK-KNLGTALTRL----- 212
E TN A + L +L +++++L+ L+ Q+ K+S E K K+LG L R
Sbjct: 459 INENDITNPAIQYLEQKLKKMEVELQQLKR---QELSKLSKERKRKHLGKTLLRRKAMKH 515
Query: 213 SPEDLCKA----------------LEIVAENNPS---FHATAQEVDLDMDAQSELTLWRL 253
S +DL K+ + I+ + P+ + E+++D+D E T+ R+
Sbjct: 516 SVDDLKKSITDKINELSDLEMNGMIRIIKNSLPADEILTSNEDEIEIDLDILDEATIARI 575
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A PF+ PVD L + Y+ ++ PMD S I+ K+ G Y +V ++ +D + +
Sbjct: 153 KDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKL---QGNVYHSVEQVTSDFKTMVD 209
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 140
N + +N + MAK + + FE+K + P+V+
Sbjct: 210 NCLNFNGPESSISSMAKRIQKYFEKKLSAMPPRVL 244
>sp|F7DRV9|BRDT_XENTR Bromodomain testis-specific protein OS=Xenopus tropicalis GN=brdt
PE=3 SV=1
Length = 933
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 31 LQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 90
LQ+ + + +H ++WPF PVD L L DYY++I+ PMD STI+ ++ + Y
Sbjct: 33 LQYLEKVVLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRL---EYNYY 89
Query: 91 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 135
+ D +F N YN DD+ VM++ L + F EK ++
Sbjct: 90 SKALDCIQDFNTMFTNCYIYNKPGDDIVVMSQELEKVFMEKIAEM 134
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+AWPF V L D + I+ PMD +TI++KM+ +G Y++ ++ +DVRL+F N
Sbjct: 302 YAWPFYK--TVIPTSLLDCSDAIKHPMDLATIRDKME--NGL-YKDTQDFASDVRLMFMN 356
Query: 107 AMKYNDERDDVHVMAKSLLEKFE 129
+ KYN ++V MA+ + + FE
Sbjct: 357 SYKYNPPDNEVVNMARKMQDVFE 379
>sp|Q9DE13|BAZ2B_CHICK Bromodomain adjacent to zinc finger domain protein 2B OS=Gallus
gallus GN=BAZ2B PE=2 SV=1
Length = 2130
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI++K+ Y NV DVRLVF
Sbjct: 2041 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIRDKLTSGQ---YPNVEAFSLDVRLVF 2095
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 136
N +N++ D+ ++ + FE+KW ++
Sbjct: 2096 DNCETFNEDDSDIGRAGHNMRKYFEKKWTEIF 2127
>sp|Q9HGP4|YK82_SCHPO Bromodomain-containing protein C631.02 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC631.02 PE=1 SV=3
Length = 727
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Query: 44 QHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRL 102
QH+ +A+PF PV+ G DY++VI+ PMD T++NK++ + Y +++ AD+ L
Sbjct: 408 QHEAYAYPFYKPVNPTACGCPDYFKVIKHPMDLGTMQNKLNHNE---YASMKAFEADMVL 464
Query: 103 VFKNAMKYNDERDDVHVMAKSLLEKFEEKW 132
+FKN K+N VH+M K L F++ W
Sbjct: 465 MFKNCYKFNSAGTPVHLMGKKLESIFQKLW 494
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 48 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 107
+ PF PVD + DY +I+ P+D T++ K G Y + + D+ L+F N
Sbjct: 251 SIPFRAPVDPVKQNIPDYPTIIKNPIDLGTMQKKFSS--GV-YSSAQHFIDDMNLMFSNC 307
Query: 108 MKYNDERDDVHVMAKSLLEKFEEKWLQL 135
YN V VM K+L FE + QL
Sbjct: 308 FLYNGTESPVGVMGKNLQATFERQLKQL 335
>sp|Q9UIF8|BAZ2B_HUMAN Bromodomain adjacent to zinc finger domain protein 2B OS=Homo sapiens
GN=BAZ2B PE=1 SV=3
Length = 2168
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF
Sbjct: 2079 HEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVF 2133
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKW 132
N +N++ D+ ++ + FE+KW
Sbjct: 2134 DNCETFNEDDSDIGRAGHNMRKYFEKKW 2161
>sp|Q9Z277|BAZ1B_MOUSE Tyrosine-protein kinase BAZ1B OS=Mus musculus GN=Baz1b PE=1 SV=2
Length = 1479
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 9/97 (9%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
+ +++++WPF PV + DYY+VIE PMDF TI+NK + YR+V+E D++
Sbjct: 1351 LVKYRFSWPFREPVTRDEA--EDYYDVIEHPMDFQTIQNKCSCGN---YRSVQEFLTDMK 1405
Query: 102 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 138
VF NA YN HV+ S +EK E+ L LL K
Sbjct: 1406 QVFANAELYNCR--GSHVL--SCMEKTEQCLLALLQK 1438
>sp|P35817|BDF1_YEAST Bromodomain-containing factor 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BDF1 PE=1 SV=3
Length = 686
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 19/161 (11%)
Query: 47 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 106
+ +PF+ PVD + L Y++ +++PMD TI K++ Y+ + + DVRLVFKN
Sbjct: 336 YNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTIAKKLNDWQ---YQTMEDFERDVRLVFKN 392
Query: 107 AMKYNDERDDVHVMAKSLLEKFEEKWL---QLLPKVMEEEKRQ-------EEEEAKAQLD 156
+N + V++M L E F KW L +E+ R E E +++ +D
Sbjct: 393 CYTFNPDGTIVNMMGHRLEEVFNSKWADRPNLDDYDSDEDSRTQGDYDDYESEYSESDID 452
Query: 157 MQLTQEAVQTNKA-KELRSELNEVDMQLENLRETVIQKCRK 196
E + TN A + L +L + ++L+ L++ ++K RK
Sbjct: 453 -----ETIITNPAIQYLEEQLARMKVELQQLKKQELEKIRK 488
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Query: 46 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 105
K A PF+ PVD L + Y+ I++PMD STI+ K+ + Y +I D L+
Sbjct: 168 KDARPFLQPVDPVKLDIPFYFNYIKRPMDLSTIERKL---NVGAYEVPEQITEDFNLMVN 224
Query: 106 NAMKYNDERDDVHVMAKSLLEKFEEKWLQL----LPKVMEEEKRQEEEEAKAQLDMQLTQ 161
N++K+N + MA+++ FE+ L + P V+ + +R + AQ D +
Sbjct: 225 NSIKFNGPNAGISQMARNIQASFEKHMLNMPAKDAPPVIAKGRR-----SSAQEDAPIVI 279
Query: 162 EAVQTNKAKELRS 174
QT+ + R+
Sbjct: 280 RRAQTHNGRPKRT 292
>sp|Q6E2N3|TRI33_DANRE E3 ubiquitin-protein ligase TRIM33 OS=Danio rerio GN=trim33 PE=2 SV=1
Length = 1163
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 25/127 (19%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H+ + F PV + +YY++I+ PMD + +K K+ K Y++ +E +DVRLVF
Sbjct: 1010 HELSTEFQEPVPT---SVPNYYKIIKHPMDLTLVKRKLQRKHPLHYKSPKEFVSDVRLVF 1066
Query: 105 KNAMKYN---------DERDDVHVMAKSLLEK--------FEEKWLQLLPK-----VMEE 142
N KYN DE +V A S + + FEE+ L++ P+ VME+
Sbjct: 1067 SNCAKYNEMSRIIQVYDEEKQSNVQADSEVAEAGKAVSLYFEERLLEIFPEQTFPVVMEK 1126
Query: 143 EKRQEEE 149
E + E E
Sbjct: 1127 ETQIEAE 1133
>sp|Q99PP7|TRI33_MOUSE E3 ubiquitin-protein ligase TRIM33 OS=Mus musculus GN=Trim33 PE=1
SV=2
Length = 1142
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 41 FITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 100
++ H+ + F PV V + +YY++I+KPMD ST+K K+ K Y+ + ADV
Sbjct: 987 YLYCHELSIEFQEPVPV---SIPNYYKIIKKPMDLSTVKKKLQKKHSQHYQIPDDFVADV 1043
Query: 101 RLVFKNAMKYNDERDDVHVMA 121
RL+FKN ++N+ V V A
Sbjct: 1044 RLIFKNCERFNEMMKVVQVYA 1064
>sp|Q9UIG0|BAZ1B_HUMAN Tyrosine-protein kinase BAZ1B OS=Homo sapiens GN=BAZ1B PE=1 SV=2
Length = 1483
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 42 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 101
I +++++WPF PV + DYY+VI PMDF T++NK YR+V+E D++
Sbjct: 1355 IVKYRFSWPFREPVTRDEA--EDYYDVITHPMDFQTVQNKC---SCGSYRSVQEFLTDMK 1409
Query: 102 LVFKNAMKYN 111
VF NA YN
Sbjct: 1410 QVFTNAEVYN 1419
>sp|Q92793|CBP_HUMAN CREB-binding protein OS=Homo sapiens GN=CREBBP PE=1 SV=3
Length = 2442
Score = 61.6 bits (148), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 30 LLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 89
L Q + + Q + PF PVD + LG+ DY+++++ PMD STIK K+D TG
Sbjct: 1090 LRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLD----TG 1145
Query: 90 -YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
Y+ + DV L+F NA YN + V+ L E FE++
Sbjct: 1146 QYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQE 1188
>sp|Q6JHU9|CBP_RAT CREB-binding protein OS=Rattus norvegicus GN=Crebbp PE=2 SV=1
Length = 2442
Score = 61.6 bits (148), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 30 LLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 89
L Q + + Q + PF PVD + LG+ DY+++++ PMD STIK K+D TG
Sbjct: 1091 LRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLD----TG 1146
Query: 90 -YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
Y+ + DV L+F NA YN + V+ L E FE++
Sbjct: 1147 QYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQE 1189
>sp|P45481|CBP_MOUSE CREB-binding protein OS=Mus musculus GN=Crebbp PE=1 SV=3
Length = 2441
Score = 61.2 bits (147), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 30 LLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 89
L Q + + Q + PF PVD + LG+ DY+++++ PMD STIK K+D TG
Sbjct: 1091 LRQALMPTLEALYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLD----TG 1146
Query: 90 -YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 131
Y+ + DV L+F NA YN + V+ L E FE++
Sbjct: 1147 QYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFEQE 1189
>sp|Q56R14|TRI33_XENLA E3 ubiquitin-protein ligase TRIM33 OS=Xenopus laevis GN=trim33 PE=1
SV=1
Length = 1091
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 20/114 (17%)
Query: 41 FITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 100
++ H+ + F PV + +YY++I+KPMD ST+K K+ K Y+ + ADV
Sbjct: 935 YLYCHELSIEFQEPVPAT---IPNYYKIIKKPMDLSTVKKKLQKKHSQHYQTPEDFVADV 991
Query: 101 RLVFKNAMKYNDERDDVHVMA-----------------KSLLEKFEEKWLQLLP 137
RL+FKN ++N+ V A K+++ FEEK + P
Sbjct: 992 RLIFKNCERFNEMMKVVQAYADTQEINLQNDSEVAQAGKAVVLYFEEKLPAIYP 1045
>sp|Q6BGW1|GCN5_DEBHA Histone acetyltransferase GCN5 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=GCN5 PE=3 SV=2
Length = 455
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 14/121 (11%)
Query: 8 SSKMHFIGKKLLEGGCKNLSASLLQFFVRQARSFITQHKWAWPFMHPVDVEGLGLHDYYE 67
S +M + +K G N +LL S +T H AWPF PV+ E +G DYY+
Sbjct: 332 SEEMDKLAQKPKRGPHYNFMVTLL--------SELTNHPSAWPFSTPVNKEEVG--DYYD 381
Query: 68 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 127
VI++PMD ST+++K++ Y + + D RL+F N YN + + + LEK
Sbjct: 382 VIKEPMDLSTMESKLENDK---YDSFDQFLYDARLIFNNCRSYNAD-STTYFKNATKLEK 437
Query: 128 F 128
F
Sbjct: 438 F 438
>sp|Q9UUK2|GCN5_SCHPO Histone acetyltransferase gcn5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gcn5 PE=1 SV=1
Length = 454
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 45 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 104
H +WPFM PV E + DYYEVIE PMD ST++ ++ Y +V E D + +F
Sbjct: 362 HPSSWPFMQPVSKEDVP--DYYEVIEHPMDLSTMEFRLRNNQ---YESVEEFIRDAKYIF 416
Query: 105 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 134
N YND + A LEKF +K L+
Sbjct: 417 DNCRSYNDSNTTYYKNADR-LEKFFQKKLR 445
>sp|Q64127|TIF1A_MOUSE Transcription intermediary factor 1-alpha OS=Mus musculus GN=Trim24
PE=1 SV=1
Length = 1051
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 41 FITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 100
F+ H+ + F PV L + DYY++I+ PMD STIK ++ +D Y + AD
Sbjct: 915 FLYCHEMSLAFQDPVP---LTVPDYYKIIKNPMDLSTIKKRLQ-EDYCMYTKPEDFVADF 970
Query: 101 RLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP--KVMEEEKRQEEEEAK 152
RL+F+N ++N+ +V L FEE L P + + E R E E+ K
Sbjct: 971 RLIFQNCAEFNEPDSEVANAGIKLESYFEELLKNLYPEKRFPKVEFRHEAEDCK 1024
>sp|O15164|TIF1A_HUMAN Transcription intermediary factor 1-alpha OS=Homo sapiens GN=TRIM24
PE=1 SV=3
Length = 1050
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 41 FITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 100
F+ H+ + F PV L + DYY++I+ PMD STIK ++ +D + Y + AD
Sbjct: 914 FLYCHEMSLAFQDPVP---LTVPDYYKIIKNPMDLSTIKKRLQ-EDYSMYSKPEDFVADF 969
Query: 101 RLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP--KVMEEEKRQEEEEAK 152
RL+F+N ++N+ +V L FEE L P + + E R E E+ K
Sbjct: 970 RLIFQNCAEFNEPDSEVANAGIKLENYFEELLKNLYPEKRFPKPEFRNESEDNK 1023
>sp|Q924W6|TRI66_MOUSE Tripartite motif-containing protein 66 OS=Mus musculus GN=Trim66 PE=1
SV=3
Length = 1242
Score = 60.1 bits (144), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 50 PFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMK 109
PF PV L H YY++I++PMD S I+ K+ KD Y E+ +DVRL+F N K
Sbjct: 1091 PFHEPV--SPLARH-YYQIIKRPMDLSIIRRKLQKKDPAHYTTPEEVVSDVRLMFWNCAK 1147
Query: 110 YNDERDDVHVMAKSLLEKFEEKWL-QLLPKVMEEEKRQEEEEAK 152
+N +V A LE F E WL ++ P + +QE+ +++
Sbjct: 1148 FNYPDSEV-AEAGRCLEVFFEGWLKEIYPDKCFAQPQQEDSDSE 1190
>sp|Q9UPN9|TRI33_HUMAN E3 ubiquitin-protein ligase TRIM33 OS=Homo sapiens GN=TRIM33 PE=1
SV=3
Length = 1127
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 41 FITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 100
++ H+ + F PV + +YY++I+KPMD ST+K K+ K Y+ + ADV
Sbjct: 972 YLYCHELSIEFQEPVPA---SIPNYYKIIKKPMDLSTVKKKLQKKHSQHYQIPDDFVADV 1028
Query: 101 RLVFKNAMKYNDERDDVHVMAKS 123
RL+FKN ++N+ V V A +
Sbjct: 1029 RLIFKNCERFNEMMKVVQVYADT 1051
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.128 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,070,346
Number of Sequences: 539616
Number of extensions: 5035094
Number of successful extensions: 123375
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1193
Number of HSP's successfully gapped in prelim test: 986
Number of HSP's that attempted gapping in prelim test: 38822
Number of HSP's gapped (non-prelim): 44082
length of query: 322
length of database: 191,569,459
effective HSP length: 117
effective length of query: 205
effective length of database: 128,434,387
effective search space: 26329049335
effective search space used: 26329049335
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)