BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020703
(322 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NZ09|ADRM1_DANRE Proteasomal ubiquitin receptor ADRM1 OS=Danio rerio GN=adrm1b PE=1
SV=1
Length = 410
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Query: 14 EILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEA 73
+ L+EFRAGKMT G V PD RKG V I + + LIHF W DRT VEDD I+FP +
Sbjct: 20 KYLVEFRAGKMTLKGSTVTPDKRKGTVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDC 79
Query: 74 VFEKVNQA-SGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123
F++VNQ +GRVY+LKF ++ F WMQEPK ++D + C VN ++N P
Sbjct: 80 EFKRVNQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDDEYCRKVNEYLNNP 130
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 14/131 (10%)
Query: 171 SSSGPVKLEDLQRIFSNIG-PADITEDPDGGLGLGDILKPDLIMPLIETLPLEQRLAPYL 229
SS+ P++L DLQ I + + PA TE G+ L +L PD++ P++ ++QRL PYL
Sbjct: 261 SSTQPIQLSDLQSILATMNVPAMPTEG--SGVDLASVLTPDVMAPILANPEVQQRLLPYL 318
Query: 230 PEGQWTP---EELLELLQSPPFRQQVDSFTYVLKTGQID--LSQFGVDPSKY-----KFT 279
P G+ P EE+ L SP F+Q + F+ L +GQ+ ++QFG+ PS+ K
Sbjct: 319 PSGESLPQSAEEIQNTLTSPQFQQAMSMFSSALASGQLGPLMNQFGL-PSEAVDAANKGD 377
Query: 280 VLSFLEALEDS 290
V +F +A+E S
Sbjct: 378 VEAFAKAMEGS 388
>sp|Q6P877|ADRM1_XENTR Proteasomal ubiquitin receptor ADRM1 OS=Xenopus tropicalis GN=adrm1
PE=2 SV=1
Length = 404
Score = 131 bits (330), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 75/111 (67%), Gaps = 1/111 (0%)
Query: 14 EILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEA 73
+ L+EFRAGKM+ G V PD RKGLV I + + LIHF W DRT VEDD I+FP +
Sbjct: 20 KYLVEFRAGKMSLKGSTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGSVEDDLIIFPDDC 79
Query: 74 VFEKVNQA-SGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123
F++V+Q +GRVY+LKF ++ F WMQEPK ++D + C VN ++N P
Sbjct: 80 EFKRVSQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDEEYCRKVNEYLNNP 130
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 78/141 (55%), Gaps = 14/141 (9%)
Query: 164 EAISDVTSSSGPVKLEDLQRIFSNIGPADITEDPDGG--LGLGDILKPDLIMPLIETLPL 221
+ S TS + P++L DLQ I + + ++ +GG + L +L P+++ P++ +
Sbjct: 249 DGASAATSPTQPIQLSDLQNILATM---NVPATGEGGQQVDLASVLTPEIMAPILANAEV 305
Query: 222 EQRLAPYLPEGQWTPE---ELLELLQSPPFRQQVDSFTYVLKTGQID--LSQFGVDP--- 273
++RL PYLP G+ P+ E+ L SP F+Q + F+ L +GQ+ +SQFG+
Sbjct: 306 QERLMPYLPSGESLPQTADEIQNTLTSPQFQQALSMFSAALASGQLGPLMSQFGLPADAV 365
Query: 274 -SKYKFTVLSFLEALEDSVSK 293
+ K + +F +A++ + S+
Sbjct: 366 DAANKGDIEAFAKAMQTTSSQ 386
>sp|Q16186|ADRM1_HUMAN Proteasomal ubiquitin receptor ADRM1 OS=Homo sapiens GN=ADRM1 PE=1
SV=2
Length = 407
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 75/114 (65%), Gaps = 1/114 (0%)
Query: 11 AMQEILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFP 70
A + L+EFRAGKM+ G V PD RKGLV I + + LIHF W DRT VEDD I+FP
Sbjct: 18 ASNKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFP 77
Query: 71 HEAVFEKVNQA-SGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123
+ F++V Q SGRVY+LKF ++ F WMQEPK ++D + C VN ++N P
Sbjct: 78 DDCEFKRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNP 131
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 77/151 (50%), Gaps = 10/151 (6%)
Query: 163 GEAISDVTSSSGPVKLEDLQRIFSNIGPADITEDPDGG--LGLGDILKPDLIMPLIETLP 220
G S S + P++L DLQ I + + ++ P GG + L +L P+++ P++
Sbjct: 249 GNGASTAASPTQPIQLSDLQSILATM---NVPAGPAGGQQVDLASVLTPEIMAPILANAD 305
Query: 221 LEQRLAPYLPEGQWTPE---ELLELLQSPPFRQQVDSFTYVLKTGQID--LSQFGVDPSK 275
+++RL PYLP G+ P+ E+ L SP F+Q + F+ L +GQ+ + QFG+
Sbjct: 306 VQERLLPYLPSGESLPQTADEIQNTLTSPQFQQALGMFSAALASGQLGPLMCQFGLPAEA 365
Query: 276 YKFTVLSFLEALEDSVSKLSESEESRQDDKN 306
+ +EA ++ ++ E+ D K+
Sbjct: 366 VEAANKGDVEAFAKAMQNNAKPEQKEGDTKD 396
>sp|Q6GN67|ADM1A_XENLA Proteasomal ubiquitin receptor ADRM1-A OS=Xenopus laevis GN=adrm1-a
PE=2 SV=2
Length = 404
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 75/111 (67%), Gaps = 1/111 (0%)
Query: 14 EILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEA 73
+ L+EFRAGKM+ G V PD RKGLV I + + LIHF W DRT VEDD I+FP +
Sbjct: 20 KYLVEFRAGKMSLKGSTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGSVEDDLIIFPDDC 79
Query: 74 VFEKVNQA-SGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123
F++V+Q +GRVY+LKF ++ F WMQEPK ++D + C +N ++N P
Sbjct: 80 EFKRVSQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDEEYCRKLNEYLNNP 130
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 79/141 (56%), Gaps = 14/141 (9%)
Query: 164 EAISDVTSSSGPVKLEDLQRIFSNIGPADITEDPDGG--LGLGDILKPDLIMPLIETLPL 221
+ S+ TS + P++L DLQ I + + ++ +GG + L +L P+++ P++ +
Sbjct: 249 DGASEATSPTQPIQLSDLQNILATM---NVPATGEGGQQVDLASVLTPEIMAPILANAEV 305
Query: 222 EQRLAPYLPEGQWTPE---ELLELLQSPPFRQQVDSFTYVLKTGQID--LSQFGVDP--- 273
++RL PYLP G+ P+ E+ L SP F+Q + F+ L +GQ+ +SQFG+
Sbjct: 306 QERLTPYLPSGESLPQTADEIQNTLTSPQFQQALGMFSAALASGQLGPLMSQFGLPADAV 365
Query: 274 -SKYKFTVLSFLEALEDSVSK 293
+ K + +F +A++ + S+
Sbjct: 366 DAANKGDIEAFAKAMQSTSSQ 386
>sp|Q9JMB5|ADRM1_RAT Proteasomal ubiquitin receptor ADRM1 OS=Rattus norvegicus GN=Adrm1
PE=2 SV=2
Length = 407
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 14 EILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEA 73
+ L+EFRAGKM+ G V PD RKGLV I + + LIHF W DRT VEDD I+FP +
Sbjct: 21 KYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGTVEDDLIIFPDDC 80
Query: 74 VFEKVNQA-SGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123
F++V Q SGRVY+LKF ++ F WMQEPK ++D + C VN +N P
Sbjct: 81 EFKRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNECLNNP 131
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 10/151 (6%)
Query: 163 GEAISDVTSSSGPVKLEDLQRIFSNIGPADITEDPDGG--LGLGDILKPDLIMPLIETLP 220
G S S + P++L DLQ I + + ++ P G + L +L P+++ P++
Sbjct: 249 GNGTSTAASPTQPIQLSDLQSILATM---NVPAGPGGSQQVDLASVLTPEIMAPILANAD 305
Query: 221 LEQRLAPYLPEGQWTP---EELLELLQSPPFRQQVDSFTYVLKTGQID--LSQFGVDPSK 275
+++RL PYLP G+ P EE+ L SP F+Q + F+ L +GQ+ + QFG+
Sbjct: 306 VQERLLPYLPSGESLPQTAEEIQNTLTSPQFQQALGMFSAALASGQLGPLMCQFGLPAEA 365
Query: 276 YKFTVLSFLEALEDSVSKLSESEESRQDDKN 306
+ +EA ++ ++S+ D K+
Sbjct: 366 VEAANKGDVEAFAKAMQNNAKSDPKEGDTKD 396
>sp|A1L5A6|ADRM1_BOVIN Proteasomal ubiquitin receptor ADRM1 OS=Bos taurus GN=ADRM1 PE=2
SV=1
Length = 407
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Query: 14 EILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEA 73
+ L+EFRAGKM+ G V PD RKGLV I + + LIHF W DRT VEDD I+FP +
Sbjct: 21 KYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDC 80
Query: 74 VFEKVNQA-SGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123
F++V Q SGRVY+LKF ++ F WMQEPK ++D + C VN ++N P
Sbjct: 81 EFKRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNP 131
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 81/154 (52%), Gaps = 16/154 (10%)
Query: 163 GEAISDVTSSSGPVKLEDLQRIFSNIGPADITEDPDGG--LGLGDILKPDLIMPLIETLP 220
G+ S S + P++L DLQ I + + + P GG + L +L P+++ P++
Sbjct: 249 GDGASTAASPAQPIQLSDLQSILATM---SVPAGPGGGQQVDLASVLTPEIMAPILANAD 305
Query: 221 LEQRLAPYLPEGQWTP---EELLELLQSPPFRQQVDSFTYVLKTGQID--LSQFGVDP-- 273
+++RL PYLP G+ P EE+ L SP F+Q + F+ L +GQ+ + QFG+
Sbjct: 306 VQERLLPYLPSGESLPQTAEEIQNTLTSPQFQQALGMFSAALASGQLGPLMCQFGLPAEA 365
Query: 274 --SKYKFTVLSFLEALEDSVSKLSESEESRQDDK 305
+ K V +F +A+++S S E +E DK
Sbjct: 366 VEAANKGDVEAFAKAMQNSASP--EQQEGDGKDK 397
>sp|Q7ZXD6|ADM1B_XENLA Proteasomal ubiquitin receptor ADRM1-B OS=Xenopus laevis GN=adrm1-b
PE=2 SV=1
Length = 404
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 75/111 (67%), Gaps = 1/111 (0%)
Query: 14 EILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEA 73
+ L+EFRAGKM+ G V PD RKGLV I + + LIHF W DRT V+DD I+FP +
Sbjct: 20 KYLVEFRAGKMSLKGSTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGSVDDDLIIFPDDC 79
Query: 74 VFEKVNQA-SGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123
F++V+Q +GRVY+LKF ++ F WMQEPK ++D + C VN ++N P
Sbjct: 80 EFKRVSQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDEEHCRKVNEYLNNP 130
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 77/141 (54%), Gaps = 14/141 (9%)
Query: 164 EAISDVTSSSGPVKLEDLQRIFSNIGPADITEDPDGG--LGLGDILKPDLIMPLIETLPL 221
+ S TS + ++L DLQ I + + ++ +GG + L +L P+++ P++ +
Sbjct: 249 DGASAATSPTQAIQLSDLQNILATM---NVPATGEGGQQVDLASVLTPEIMAPILANAEV 305
Query: 222 EQRLAPYLPEGQWTPE---ELLELLQSPPFRQQVDSFTYVLKTGQID--LSQFGVDP--- 273
++RL PYLP G+ P+ E+ L SP F+Q + F+ L +GQ+ +SQFG+
Sbjct: 306 QERLMPYLPSGESLPQTADEIQNTLTSPQFQQALSMFSAALASGQLGPLMSQFGLPADAV 365
Query: 274 -SKYKFTVLSFLEALEDSVSK 293
+ K + +F +A++ + S+
Sbjct: 366 DAANKGDIEAFAKAMQSTSSQ 386
>sp|Q9JKV1|ADRM1_MOUSE Proteasomal ubiquitin receptor ADRM1 OS=Mus musculus GN=Adrm1 PE=1
SV=2
Length = 407
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Query: 14 EILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEA 73
+ L+EFRAGKM+ G V PD RKGLV I + + LIHF W DRT VEDD I+FP +
Sbjct: 21 KYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGTVEDDLIIFPDDC 80
Query: 74 VFEKVNQA-SGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123
F++V Q SGRVY+LKF ++ F WMQEPK ++D + C VN +N P
Sbjct: 81 EFKRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNECLNNP 131
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 76/151 (50%), Gaps = 10/151 (6%)
Query: 163 GEAISDVTSSSGPVKLEDLQRIFSNIGPADITEDPDGG--LGLGDILKPDLIMPLIETLP 220
G S S + P++L DLQ I + + ++ P G + L +L P+++ P++
Sbjct: 249 GNGTSTAASPTQPIQLSDLQSILATM---NVPAGPGGSQQVDLASVLTPEIMAPILANAD 305
Query: 221 LEQRLAPYLPEGQWTPE---ELLELLQSPPFRQQVDSFTYVLKTGQID--LSQFGVDPSK 275
+++RL PYLP G+ P+ E+ L SP F+Q + F+ L +GQ+ + QFG+
Sbjct: 306 VQERLLPYLPSGESLPQTADEIQNTLTSPQFQQALGMFSAALASGQLGPLMCQFGLPAEA 365
Query: 276 YKFTVLSFLEALEDSVSKLSESEESRQDDKN 306
+ +EA ++ ++S+ D K+
Sbjct: 366 VEAANKGDVEAFAKAMQNNAKSDPKEGDTKD 396
>sp|Q98SH3|ADRM1_CHICK Proteasomal ubiquitin receptor ADRM1 OS=Gallus gallus GN=ADRM1 PE=2
SV=1
Length = 406
Score = 128 bits (321), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Query: 14 EILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEA 73
+ L+EFRAGKM+ G V PD RKGLV I + + LIHF W DRT VEDD I+FP +
Sbjct: 21 KYLVEFRAGKMSLKGSTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDC 80
Query: 74 VFEKVNQA-SGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123
F++V Q +GRVY+LKF ++ F WMQEPK ++D + C VN ++N P
Sbjct: 81 EFKRVPQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDEEHCRKVNEYLNNP 131
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 21/144 (14%)
Query: 175 PVKLEDLQRIFSNIGPADITEDPDGGLG----LGDILKPDLIMPLIETLPLEQRLAPYLP 230
P++L DLQ I + + P G G L +L P+++ P++ +++RL PYLP
Sbjct: 261 PIQLSDLQNILATM------NVPSGAGGQQVDLATVLTPEIMAPILANAEVQERLMPYLP 314
Query: 231 EGQWTP---EELLELLQSPPFRQQVDSFTYVLKTGQID--LSQFGVDP----SKYKFTVL 281
G+ P EE+ L SP F+Q + F+ L +GQ +SQFG+ + K V
Sbjct: 315 SGESLPQTAEEIQNTLTSPQFQQALSMFSAALASGQHGPLMSQFGLPAEAIDAANKGDVE 374
Query: 282 SFLEALEDSVSKLSESEESRQDDK 305
+F +A+++SV S+ +E DK
Sbjct: 375 AFAKAMQNSVK--SDQKEGDSKDK 396
>sp|Q7K2G1|ADRM1_DROME Proteasomal ubiquitin receptor ADRM1 homolog OS=Drosophila
melanogaster GN=CG13349 PE=1 SV=1
Length = 389
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 74/108 (68%), Gaps = 1/108 (0%)
Query: 17 LEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEAVFE 76
+EFRAG+M GK V PD RKGLV + + + GL+HF W DRT VEDD IVFP + ++
Sbjct: 18 VEFRAGRMNMVGKMVHPDPRKGLVYMTQSDDGLMHFCWKDRTSGKVEDDLIVFPDDFEYK 77
Query: 77 KVNQA-SGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123
+V+Q +GRVY+LKF + R+ F WMQEPK ++D + C +N +N P
Sbjct: 78 RVDQCKTGRVYVLKFKSSTRRMFFWMQEPKTDKDDEQCRRINELLNNP 125
>sp|Q09289|ADRM1_CAEEL Proteasomal ubiquitin receptor ADRM1 homolog OS=Caenorhabditis
elegans GN=C56G2.7 PE=3 SV=2
Length = 374
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 133/310 (42%), Gaps = 63/310 (20%)
Query: 16 LLEFRAGKMTFDG------KKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVF 69
++EF+AG+ + +KVV + +KGLV I + LIHF W DR V DD I+F
Sbjct: 18 IVEFKAGRSRLEAGSGDTMRKVVAEPKKGLVFIKQSNDMLIHFCWKDRETGAVVDDLIIF 77
Query: 70 PHEAVFEKV-NQASGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRPLVF-- 126
P +A F+ V G+VY+LKF + D K F W+Q+ + D L V +N+P
Sbjct: 78 PDDAEFKAVPGCPDGKVYMLKFKSGDMKLF-WIQDSTPDVDKDLVKKVTDALNKPPTSRP 136
Query: 127 ---------VNEEELDASVPLQVSEDMVE------------------------------- 146
N + A L S DM
Sbjct: 137 AASRSAGSNANTDRQSAGGSLISSSDMNAPLGGIDQGQLMSLIQSLQGGNSDTLPISSVP 196
Query: 147 --DDVSSRAGNLVVPNLGGEAISDVTSSSGPVKLEDLQRIFSNIGPADITEDPDGGLGLG 204
+D SS A N E S+ S + P +Q+IF+N+G + E + L
Sbjct: 197 RGEDASSEADCEPSTNAAEEGSSNPLSLNNPA----IQQIFNNLGRSQKKE---VAVSLA 249
Query: 205 DILKPDLIMPLIETLPLEQRLAPYLPEGQWTPEELLELLQSPPFRQQVDSFTYVLKTGQI 264
L + + + E LAP+LP EL E +++P FRQ D+ + L+TGQ+
Sbjct: 250 TALSNETVAEVARNHAEE--LAPHLPTSDDPARELSETVRTPQFRQAADTLGHALQTGQL 307
Query: 265 D--LSQFGVD 272
++QFG+D
Sbjct: 308 GPVVAQFGMD 317
>sp|Q9Y7Y6|YOY4_SCHPO Uncharacterized protein C342.04 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC342.04 PE=3 SV=1
Length = 291
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 143/305 (46%), Gaps = 38/305 (12%)
Query: 16 LLEFRAGKMT-FDGKKVV-PDSRKGLVRIARGEHGLIHFQWLDRTR-NVVEDDQIVFPHE 72
L+ F+AGK+ G K++ D KG + + R +GLIHFQW R EDD IVF E
Sbjct: 3 LITFKAGKLRRVPGTKLLRADPEKGYIVMNRDAYGLIHFQWAKRNDLENPEDDIIVFSSE 62
Query: 73 AVFEKVNQAS-GRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRPLVFVNEEE 131
FEKV + + GR Y+LK+ + F WMQE + D+ +N +I +++
Sbjct: 63 CTFEKVTECTTGRAYMLKYPSSAHSLFYWMQEASDDNDTSYAERINSYIK------DQDL 116
Query: 132 LD-ASVPLQVSEDMVEDDVSSRAGNLVVPN--------LGGEAISDVTSSSGPVKLEDLQ 182
LD A + DM+E D ++ + P +G ++ SS L L
Sbjct: 117 LDPARSDVATVSDMMEVDTVEQSEPIAQPTESSKESSEIGAPNSDEINSSEAVRNL--LA 174
Query: 183 RIFSNIGPADITEDPDGGLGLGDILKPDLIMPLIETLPLEQRLAPYLPEGQWTP---EEL 239
I + G T D L +ILKP + L+ + RL PY+P TP E +
Sbjct: 175 TISAQAGFGGSTVD------LCEILKPSNLTDLLCQEGVIDRLMPYMPPD--TPNNLEGV 226
Query: 240 LELLQSPPFRQQVDSFTYVLKT-GQID-LSQFGV----DPSKYKFTVLSFLEALEDSVSK 293
L ++ SP + Q + SF+ L + G ++ +S G+ + + L FL+A+ VS+
Sbjct: 227 LAIVSSPQYAQALRSFSQALNSPGGVNIISALGLSLDESANPNEGGALQFLKAIARFVSR 286
Query: 294 LSESE 298
+ SE
Sbjct: 287 NNGSE 291
>sp|Q556N5|ADRM1_DICDI Proteasomal ubiquitin receptor ADRM1 homolog OS=Dictyostelium
discoideum GN=adrm1-1 PE=1 SV=1
Length = 287
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 134/303 (44%), Gaps = 37/303 (12%)
Query: 17 LEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEAVFE 76
+EF+AGK G V DSRKG ++ GL QW R + ED+ P E+ F
Sbjct: 8 VEFKAGKAKLTGTTVTSDSRKGYLKFGVTPEGLTCVQWRPRDSSAYEDEFYFAPGESKFI 67
Query: 77 KVNQA-SGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRPLVFVNEEELDAS 135
KV +GR+Y L F+ D+K F W+QE E D+++ ++ +++
Sbjct: 68 KVPACKTGRMYYLNFSGSDQKEFYWLQEANVEGDAKIEKALKV-------------IESY 114
Query: 136 VPLQVSEDMVEDDVSSRAGNLVVPNLGGEAISDVTSSS---------GPVKLEDLQRIFS 186
+P ++ + D + I++V+ S L+ ++ +FS
Sbjct: 115 IPDDDDDEEMVVDTPPPTTTIKQEPPKNPTINEVSLSQPKPTTTPPPSATNLDFIKDLFS 174
Query: 187 NIGPADITEDPDGGLGLGDILKPDLIMPLIETLP-LEQRLAPYLPEGQWTPEELL-ELLQ 244
N+ T+ + LG IL + ++P + P +++ L YLPE E ++ E+L
Sbjct: 175 NLP----TQPKQPQITLGKILTAENLIPFLRENPEIKKDLIQYLPEEYQKDENMINEVLH 230
Query: 245 SPPFRQQVDSFTYVLKTGQID--LSQFGVDPSKYKFTVLSFLEALEDSVSKLSESEESRQ 302
S F Q +++ Y + G +S G +PS ++ +E ++ + E ++
Sbjct: 231 SAQFLQSIETLDYAIHEGHGPEIVSLLGYEPS------IASQRGVEGFLTNIQEGTNKKK 284
Query: 303 DDK 305
++K
Sbjct: 285 NNK 287
>sp|Q9USM1|ADRM1_SCHPO Probable proteasomal ubiquitin receptor ADRM1 homolog
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC16A11.16c PE=3 SV=1
Length = 388
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 5/114 (4%)
Query: 16 LLEFRAGKMTFD-GKKVV-PDSRKGLVRIARGEHGLIHFQWLDRTR--NVVEDDQIVFPH 71
L+ +AGK+ G ++ D RKG++ + L+HF W +R R VEDD I+FP
Sbjct: 20 LVSVKAGKLQRKPGTNILQADHRKGVIYMQMASDELLHFYWKERARVSREVEDDYIIFPE 79
Query: 72 EAVFEKVNQAS-GRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRPL 124
EA F K+++ + GRVY LKF + + F WMQE E+D + + +N I P+
Sbjct: 80 EAEFIKIDECTTGRVYALKFKSSSQIHFYWMQEYSDEKDKETASLINQLIADPV 133
>sp|Q8GT66|TIC40_PEA Protein TIC 40, chloroplastic OS=Pisum sativum GN=TIC40 PE=1 SV=1
Length = 436
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 207 LKPDLIMPLIETLPLEQRLAPYLPEGQWTPEELLELLQSPPFRQQVDS 254
L D + ++E ++Q + PYLPE P ++Q+P +RQQ+++
Sbjct: 286 LSVDALEKMMEDPTVQQMVYPYLPEEMRNPSTFKWMMQNPEYRQQLEA 333
>sp|O02151|NHR14_CAEEL Nuclear hormone receptor family member nhr-14 OS=Caenorhabditis
elegans GN=nhr-14 PE=2 SV=3
Length = 435
Score = 32.7 bits (73), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 201 LGLGDILKPDLIMPLIETLPLEQRLAPYLPEGQWTP 236
GLGD++K D I P IET PLE + P +P+ P
Sbjct: 339 FGLGDVIKRDTISPKIETPPLEMK--PMMPKIAQPP 372
>sp|Q9FMD5|TIC40_ARATH Protein TIC 40, chloroplastic OS=Arabidopsis thaliana GN=TIC40 PE=1
SV=1
Length = 447
Score = 31.6 bits (70), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 215 LIETLPLEQRLAPYLPEGQWTPEELLELLQSPPFRQQV 252
++E +++ + PYLPE PE +L++P +RQQ+
Sbjct: 307 MMEDPTVQKMVYPYLPEEMRNPETFKWMLKNPQYRQQL 344
>sp|P81171|Y174_RICPR Uncharacterized peptidase RP174 OS=Rickettsia prowazekii (strain
Madrid E) GN=RP174 PE=3 SV=2
Length = 722
Score = 31.6 bits (70), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 76 EKVNQASGRV--YILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRPLVFVNEEEL 132
++V+ GR+ Y+L N + + +FL ++ S L S NYFIN F N +L
Sbjct: 659 QRVHPWHGRIFEYVLAQNPNTKTYFLESRDSGHSSGSDLKESANYFINLYTFFANTLKL 717
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.134 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120,466,858
Number of Sequences: 539616
Number of extensions: 5324726
Number of successful extensions: 11553
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 11489
Number of HSP's gapped (non-prelim): 42
length of query: 322
length of database: 191,569,459
effective HSP length: 117
effective length of query: 205
effective length of database: 128,434,387
effective search space: 26329049335
effective search space used: 26329049335
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)