Query 020703
Match_columns 322
No_of_seqs 135 out of 261
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 06:57:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020703.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020703hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kr0_A Proteasomal ubiquitin r 100.0 4.1E-75 1.4E-79 571.1 27.6 283 11-294 22-392 (411)
2 2r2y_A Protein ADRM1; proteaso 100.0 2.6E-48 9E-53 335.7 14.7 115 11-125 21-136 (153)
3 4b4t_X 26S proteasome regulato 100.0 1.2E-43 3.9E-48 308.4 11.1 113 12-125 3-134 (156)
4 2kqz_A Proteasomal ubiquitin r 100.0 1.7E-31 5.9E-36 232.0 6.4 123 171-294 5-136 (155)
5 3pp2_A RHO GTPase-activating p 57.7 12 0.00042 29.5 4.6 48 73-121 75-123 (124)
6 1klf_A FIMC chaperone, chapero 52.1 81 0.0028 27.4 9.4 74 24-101 2-85 (205)
7 2dn6_A KIAA0640 protein; PH do 47.6 51 0.0018 24.5 6.6 55 65-123 49-105 (115)
8 2xg5_A PAPD, chaperone protein 46.3 1.3E+02 0.0044 26.4 9.8 74 24-101 2-88 (218)
9 4djm_A DRAB; chaperone, PILI; 37.8 1.7E+02 0.0059 26.0 9.4 79 20-102 20-106 (239)
10 2kzb_A Autophagy-related prote 32.5 39 0.0013 26.8 3.6 53 30-90 4-58 (118)
11 2ec1_A Nucleoporin 50 kDa; ran 29.9 2.1E+02 0.0073 22.8 9.4 105 11-119 10-122 (125)
12 1l4i_A SFAE protein; periplasm 27.7 2.9E+02 0.01 23.7 9.0 74 24-101 2-85 (206)
13 1upq_A PEPP1; PH domain, phosp 27.5 1.5E+02 0.0051 22.1 6.3 51 72-123 59-111 (123)
14 2p0d_A RHO GTPase-activating p 25.9 2.3E+02 0.0079 21.9 7.3 49 72-123 76-126 (129)
15 1dro_A Beta-spectrin; cytoskel 23.9 73 0.0025 24.4 3.9 41 82-123 81-121 (122)
16 2f6m_A Suppressor protein STP2 22.2 94 0.0032 22.6 3.8 32 248-293 18-49 (65)
17 1pfj_A TFIIH basal transcripti 22.0 2.3E+02 0.0079 22.5 6.4 56 38-100 22-78 (108)
18 3cxb_B Pleckstrin homology dom 20.9 1.9E+02 0.0064 21.8 5.7 38 84-124 67-104 (112)
19 1wjm_A Beta-spectrin III; PH d 20.1 1.3E+02 0.0045 22.7 4.7 37 85-124 84-120 (123)
20 2llw_A Heat shock protein STI1 20.1 46 0.0016 24.4 1.8 23 235-257 41-63 (71)
21 3q48_A Chaperone CUPB2; IG fol 20.0 4.7E+02 0.016 23.3 9.0 77 21-102 28-117 (257)
No 1
>2kr0_A Proteasomal ubiquitin receptor ADRM1; proteasome, 19S regulator, protein binding; NMR {Homo sapiens}
Probab=100.00 E-value=4.1e-75 Score=571.10 Aligned_cols=283 Identities=35% Similarity=0.617 Sum_probs=223.5
Q ss_pred CCCcceEEEeceeeEecCCceeecCCCcEEEEEeCCCCceEEEEeeCCCCCcccceeeeCCceEEEEecc-CCCeEEEEE
Q 020703 11 AMQEILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQ-ASGRVYILK 89 (322)
Q Consensus 11 ~~~~~lvefkAGk~~~~g~~V~Pd~rKG~l~l~~~~d~l~hf~W~~R~~~~~edd~ii~P~d~~f~~V~~-~tgRVyvLk 89 (322)
.++++||+||||||.++|++|+||+|||+|||++.+|+|+||||++|+++.+|||+||||+|++|+||++ |||||||||
T Consensus 22 s~~~~lveFkAGk~~~~g~~V~Pd~rKG~l~l~~~ed~l~hf~W~~R~~~~~Eddlii~P~d~~f~~V~~c~tGRVyvLk 101 (411)
T 2kr0_A 22 ASNKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDCEFKRVPQCPSGRVYVLK 101 (411)
T ss_dssp SCCSCSEEECEEEEEESSSSEEECCSCEEEEEEECTTSCEEEEEEESSSCCEEEEEEECTTSEEEEECTTCSSSCEEEEE
T ss_pred CCCceeEEEeCceEEecCCEEeecCCCcEEEEEeCCCCcEEEEEecCCCCCcccceEEcCCceEEEECCCCCCCeEEEEE
Confidence 5669999999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred EcCCCceeEEeccCCCChhhHHHHHHHHHHhcCCcccc-----c----------ccccccCCccccc-----cc------
Q 020703 90 FNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRPLVFV-----N----------EEELDASVPLQVS-----ED------ 143 (322)
Q Consensus 90 F~ss~~~~fFWmQe~~~~~D~~~~~kin~~i~~p~~~~-----~----------~~~~~~~~~~~~~-----~~------ 143 (322)
|+++++||||||||++.++|++||++||++|++++.+. + .++....+..+|+ +.
T Consensus 102 F~ss~~r~fFWmQe~~~~~D~~~~~~vN~ll~~~~~~~~~~~~gs~~~~~~~~g~e~dl~~~~~~~sq~qlmql~g~~g~ 181 (411)
T 2kr0_A 102 FKAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNPPMPGALGASGSSGHELSALGGEGGLQSLLGNMSHSQLMQLIGPAGL 181 (411)
T ss_dssp ETTTCCEEEEEECCSCGGGHHHHHHHHHHHHHSCSCCSCSCCCSSCCCCSSCCCSCCCSCSCSSCCCSCCSSCCCCSSCC
T ss_pred ecCCCceeEEEecCCCcccHHHHHHHHHHHHhCCcccccccccCccccccccccccchhhhccccccHHHHHHhhhcccc
Confidence 99999999999999999999999999999999986532 0 0110000000000 00
Q ss_pred -------------c----ccCccccC-------CCCC--------CCC----CCC---CC-------------CCCCCCC
Q 020703 144 -------------M----VEDDVSSR-------AGNL--------VVP----NLG---GE-------------AISDVTS 171 (322)
Q Consensus 144 -------------~----~~~~~ss~-------~~~~--------~~~----~~~---~~-------------~~~~~~s 171 (322)
+ ......++ +..+ ..+ .|. +. .++..++
T Consensus 182 ~~~~gl~~~~gp~~~~~~~s~~~~~~~~s~~~~~~~~~~tp~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (411)
T 2kr0_A 182 GGLGGLGALTGPGLASLLGSSGPPGSSSSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSPAPSSGNGASTAAS 261 (411)
T ss_dssp CSTTCSCCCCCCSTTTTTCSCCCCSSSCCCCSCCCCCCCCTTSCCCCCCSCCCCCCCSSCCCSSCCCCSCCSSSSSTTTS
T ss_pred ccccccccccCcccccccccCCCccccccccccccccccccccccccccccccccccccccccccccccccccCCccccc
Confidence 0 00000000 0000 000 000 00 0011123
Q ss_pred CCCCCchhHHHHHHhhcCCCCCCCCCCCCCCccccCCccchhHhhcCchHHHhhcCCCCCCC---CCHHHHHHHhcChhH
Q 020703 172 SSGPVKLEDLQRIFSNIGPADITEDPDGGLGLGDILKPDLIMPLIETLPLEQRLAPYLPEGQ---WTPEELLELLQSPPF 248 (322)
Q Consensus 172 ~~~~~~l~~lq~iL~~l~~~~~~~~~~~~~~L~dvLt~e~l~~lL~~~~~~~~L~~~LP~~~---~t~e~L~~~lrSPQF 248 (322)
+.+++++++||+||++|+..... ...++++|++||++++|.+||++++++++|++|||+++ +++++|+++||||||
T Consensus 262 ~~~~i~l~dLq~iLasl~~~~~~-~~~~~v~L~dvLt~e~l~pll~d~e~~erL~~~LP~~~~~~~t~e~L~e~l~SPQF 340 (411)
T 2kr0_A 262 PTQPIQLSDLQSILATMNVPAGP-AGGQQVDLASVLTPEIMAPILANADVQERLLPYLPSGESLPQTADEIQNTLTSPQF 340 (411)
T ss_dssp CCCCSSHHHHHHHHHHHTSSSCT-TCSHHHHGGGTSCHHHHHHHHTSHHHHHHHGGGCCSSCCCCCSHHHHTTSCCSHHH
T ss_pred cCCcccHHHHHHHHHhhcccccc-ccCCCCCHHHhhCHHHHHHHhcCHHHHHHHHhhCCCCcCcCCCHHHHHHHhcCHHH
Confidence 35678999999999999742211 14567999999999999999999999999999999985 399999999999999
Q ss_pred HHHHHHHHHHHHcCccc--ccccCCCcccc----cccHHHHHHHHHHhhccc
Q 020703 249 RQQVDSFTYVLKTGQID--LSQFGVDPSKY----KFTVLSFLEALEDSVSKL 294 (322)
Q Consensus 249 qQAl~~ls~AL~sG~l~--l~qfGl~~~~~----~~~VeaFl~al~~~~~k~ 294 (322)
+|||++|++|||+|+|+ |+||||+.++. .++|++||+||++.++++
T Consensus 341 ~QaL~~fs~AL~sGqL~pll~qfgL~~~~~~aa~~G~VeaFl~al~~~~~~~ 392 (411)
T 2kr0_A 341 QQALGMFSAALASGQLGPLMCQFGLPAEAVEAANKGDVEAFAKAMQNNAKPE 392 (411)
T ss_dssp HHHHHHHHHHHHHTSSTHHHHHHTCCHHHHHHHHHTCHHHHHHHHHHTCSSS
T ss_pred HHHHHHHHHHHhcCCchHHHHHhCCChhhhhhhccCCHHHHHHHHHHHhhcc
Confidence 99999999999999999 89999998764 248999999999999864
No 2
>2r2y_A Protein ADRM1; proteasome, ubiquitin, PH-domain, 19S regulator, receptor, U proteasome-degradation pathway; 1.70A {Mus musculus} PDB: 2z59_A
Probab=100.00 E-value=2.6e-48 Score=335.74 Aligned_cols=115 Identities=50% Similarity=0.941 Sum_probs=107.0
Q ss_pred CCCcceEEEeceeeEecCCceeecCCCcEEEEEeCCCCceEEEEeeCCCCCcccceeeeCCceEEEEecc-CCCeEEEEE
Q 020703 11 AMQEILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQ-ASGRVYILK 89 (322)
Q Consensus 11 ~~~~~lvefkAGk~~~~g~~V~Pd~rKG~l~l~~~~d~l~hf~W~~R~~~~~edd~ii~P~d~~f~~V~~-~tgRVyvLk 89 (322)
.++++||+||||||.++|++|+||+|||+|||++.+|+|+||||++|+++.+|||+||||+|++|++|++ +||||||||
T Consensus 21 ~~~~~lveFkAGkm~l~g~~V~Pd~rKG~l~l~~~ed~l~hf~W~~R~t~~vEdDlIi~P~d~~F~kV~~c~tGRVyvLk 100 (153)
T 2r2y_A 21 SSTKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGTVEDDLIIFPDDCEFKRVPQCPSGRVYVLK 100 (153)
T ss_dssp ----CCEEEEEEEEEEETTEEEECCSCEEEEEEECTTSCEEEEEEETTTCCEEEEEECCTTSEEEEECTTCTTSCEEEEE
T ss_pred cCCceeEEEeCceEEecCCEEeECCCCEEEEEEECCCCcEEEEEecCCCCCccceEEEcCCCeEEEECCCCCCCeEEEEE
Confidence 6779999999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred EcCCCceeEEeccCCCChhhHHHHHHHHHHhcCCcc
Q 020703 90 FNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRPLV 125 (322)
Q Consensus 90 F~ss~~~~fFWmQe~~~~~D~~~~~kin~~i~~p~~ 125 (322)
|++++++|||||||++.++|+++|++||++|++|++
T Consensus 101 F~ss~~r~FFWmQe~~~~~D~~~~~kvN~lL~~p~~ 136 (153)
T 2r2y_A 101 FKAGSKRLFFWMQEPKTDQDEEHCRKVNECLNNPPM 136 (153)
T ss_dssp ETTTCCEEEEEECSSSSTTHHHHHHHHHHHHHC---
T ss_pred ecCCCceEEEEecCCCcccHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999875
No 3
>4b4t_X 26S proteasome regulatory subunit RPN13; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} PDB: 2z4d_A
Probab=100.00 E-value=1.2e-43 Score=308.35 Aligned_cols=113 Identities=25% Similarity=0.558 Sum_probs=99.3
Q ss_pred CCcceEEEeceeeEecC--CceeecCCCcEEEEEeCCC---CceEEEEeeCCCCC----cccceeeeCCceEEEEecc-C
Q 020703 12 MQEILLEFRAGKMTFDG--KKVVPDSRKGLVRIARGEH---GLIHFQWLDRTRNV----VEDDQIVFPHEAVFEKVNQ-A 81 (322)
Q Consensus 12 ~~~~lvefkAGk~~~~g--~~V~Pd~rKG~l~l~~~~d---~l~hf~W~~R~~~~----~edd~ii~P~d~~f~~V~~-~ 81 (322)
++.+||+||||||.+++ ++|+|++|||+|||++++| +|+||||++|+++. +++|+||||||++|++|++ +
T Consensus 3 ~s~~li~FkAGk~~~~~~tk~v~Pd~rKG~i~l~~~~d~~~~l~hf~W~~R~~~~~~~~~~~dlii~P~d~~f~~v~~c~ 82 (156)
T 4b4t_X 3 MSSTVIKFRAGVCEYNEDSRLCTPIPVQGEIEIKPNEEEELGFWDFEWRPTEKPVGRELDPISLILIPGETMWVPIKSSK 82 (156)
T ss_dssp ----CEEECEEEEEEETTTTEEEECSCCCBEEEESCSSSSSCCCEEECBSCSCCSSCCCCCCEECCCTTTSEEECCSSCS
T ss_pred CCceeEEEeCceEEEcCCccEEeecCCceEEEEEECCCCCcceEEEEEecCCCCCcCCCCccceEEcCCceEEEEcCCCC
Confidence 45789999999999986 6899999999999999877 69999999999864 3459999999999999999 9
Q ss_pred CCeEEEEEEcCCCceeEEeccCCCC---------hhhHHHHHHHHHHhcCCcc
Q 020703 82 SGRVYILKFNTDDRKFFLWMQEPKA---------EEDSQLCNSVNYFINRPLV 125 (322)
Q Consensus 82 tgRVyvLkF~ss~~~~fFWmQe~~~---------~~D~~~~~kin~~i~~p~~ 125 (322)
||||||||| +|++|||||||++++ ++|.++|++||++||++..
T Consensus 83 tGRVyvLkF-ss~~r~fFWmQe~~~~~~~~~~~s~kD~~~~~~vn~lL~~~~~ 134 (156)
T 4b4t_X 83 SGRIFALVF-SSNERYFFWLQEKNSGNLPLNELSAKDKEIYNKMIGVLNNSSE 134 (156)
T ss_dssp SCCEEEEEC-SSSCCEEEEECSSCSSSSSSCCCSSSSHHHHHHHHHHHHCC--
T ss_pred CcEEEEEEe-cCCCcEEEEeecCCccCCcccccchhHHHHHHHHHHHhcCCcc
Confidence 999999999 678999999999985 6799999999999999854
No 4
>2kqz_A Proteasomal ubiquitin receptor ADRM1; proteasome, UCH37-binding domain, protein binding; NMR {Homo sapiens} PDB: 2l5v_A
Probab=99.97 E-value=1.7e-31 Score=232.00 Aligned_cols=123 Identities=29% Similarity=0.565 Sum_probs=109.0
Q ss_pred CCCCCCchhHHHHHHhhcCCCCCCCCCCCCCCccccCCccchhHhhcCchHHHhhcCCCCCCCC---CHHHHHHHhcChh
Q 020703 171 SSSGPVKLEDLQRIFSNIGPADITEDPDGGLGLGDILKPDLIMPLIETLPLEQRLAPYLPEGQW---TPEELLELLQSPP 247 (322)
Q Consensus 171 s~~~~~~l~~lq~iL~~l~~~~~~~~~~~~~~L~dvLt~e~l~~lL~~~~~~~~L~~~LP~~~~---t~e~L~~~lrSPQ 247 (322)
++++++++++||+||++|+..... .+.++++|++||++++|.+||++++++++|++|||++.. ++++|+++|||||
T Consensus 5 ~~~~~i~l~~lq~il~sl~~~~~~-~~~~~~~L~dvLt~e~l~~ll~d~~~~~~L~~~LP~~~~~~~~~e~L~~~l~SPQ 83 (155)
T 2kqz_A 5 SPTQPIQLSDLQSILATMNVPAGP-AGGQQVDLASVLTPEIMAPILANADVQERLLPYLPSGESLPQTADEIQNTLTSPQ 83 (155)
T ss_dssp CSCCCCSTTHHHHHHHHTCCCCCC-CSSSHHHHHHHTCTTTSHHHHHSHHHHHHHHHHSCSSCCCCSSHHHHHSSCCSHH
T ss_pred CCCCCccHHHHHHHHHHhcccccc-CCCCCCCHHHHhCHHHHHHHHcCHHHHHHHHhhCCCCCCCCCCHHHHHHHHcCHH
Confidence 346678999999999999742222 246789999999999999999999999999999999964 9999999999999
Q ss_pred HHHHHHHHHHHHHcCccc--ccccCCCcccc----cccHHHHHHHHHHhhccc
Q 020703 248 FRQQVDSFTYVLKTGQID--LSQFGVDPSKY----KFTVLSFLEALEDSVSKL 294 (322)
Q Consensus 248 FqQAl~~ls~AL~sG~l~--l~qfGl~~~~~----~~~VeaFl~al~~~~~k~ 294 (322)
|+|||++|++|||+|+++ ++||||++++. .++|++|++||++.+++.
T Consensus 84 F~Qal~~fs~AL~sG~l~~vl~qfgl~~~~~~~a~~g~Ve~Fl~al~~~~~~~ 136 (155)
T 2kqz_A 84 FQQALGMFSAALASGQLGPLMCQFGLPAEAVEAANKGDVEAFAKAMQNNAKPE 136 (155)
T ss_dssp HHHHHHHHHHHHHHTSSHHHHHHTTCCHHHHHHHHHTCHHHHHHHHHHHCSCS
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHcCCChhhhhhhccCCHHHHHHHHHHHHhcc
Confidence 999999999999999999 89999998764 248999999999999874
No 5
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=57.65 E-value=12 Score=29.47 Aligned_cols=48 Identities=17% Similarity=0.157 Sum_probs=30.6
Q ss_pred eEEEEec-cCCCeEEEEEEcCCCceeEEeccCCCChhhHHHHHHHHHHhc
Q 020703 73 AVFEKVN-QASGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFIN 121 (322)
Q Consensus 73 ~~f~~V~-~~tgRVyvLkF~ss~~~~fFWmQe~~~~~D~~~~~kin~~i~ 121 (322)
+...... ..+.|=++++....+.+.| =+|-.+.+.=.+|+..|+..|.
T Consensus 75 a~v~~~~~d~~krk~vF~l~t~~~~~y-lfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 75 ATLSWAPKDKSSRKNVLELRSRDGSEY-LIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp CEEEECCGGGCSSSSEEEEECTTSCEE-EEECSCHHHHHHHHHHHHHHHC
T ss_pred CEEEecccccCCCceEEEEECCCCCEE-EEECCCHHHHHHHHHHHHHHHh
Confidence 5566653 3334444444444444443 3888888877899999999885
No 6
>1klf_A FIMC chaperone, chaperone protein FIMC; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1 PDB: 1kiu_A* 3rfz_C 1qun_A 1bf8_A 1ze3_C 3bwu_C 3jwn_C
Probab=52.12 E-value=81 Score=27.43 Aligned_cols=74 Identities=18% Similarity=0.419 Sum_probs=45.0
Q ss_pred eEecCCce-eecC-CCcEEEEEeCCCC---ceEEEEeeCCCCCcccceeeeCCceEEEEeccCCCeEEEEEE-cC----C
Q 020703 24 MTFDGKKV-VPDS-RKGLVRIARGEHG---LIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQASGRVYILKF-NT----D 93 (322)
Q Consensus 24 ~~~~g~~V-~Pd~-rKG~l~l~~~~d~---l~hf~W~~R~~~~~edd~ii~P~d~~f~~V~~~tgRVyvLkF-~s----s 93 (322)
+.+++++| .+-. +-..|.|.-.++. |++ .|.+...+.....||+.|- +.|++...+.+.-+.+ .. .
T Consensus 2 v~l~~TRvIy~~~~k~~sl~l~N~~~~~p~LvQ-sWi~~~~~~~~~pfivtPP---l~rl~p~~~q~lRI~~~~~~~lP~ 77 (205)
T 1klf_A 2 VALGATRVIYPAGQKQVQLAVTNNDENSTYLIQ-SWVENADGVKDGRFIVTPP---LFAMKGKKENTLRILDATNNQLPQ 77 (205)
T ss_dssp EEESCSEEEEETTCSEEEEEEEECCSSCCEEEE-EEEEETTSCCCSSEEEESS---EEEECSSEEEEEEEEECSCSCSCS
T ss_pred eEecceEEEEeCCCcEEEEEEEcCCCCCcEEEE-EEEecCCCCccCCEEEcCC---eEEECCCCceEEEEEecCCCCCCC
Confidence 34667654 3333 3345566554444 555 4988655555678999998 7888874444444444 32 2
Q ss_pred CceeEEec
Q 020703 94 DRKFFLWM 101 (322)
Q Consensus 94 ~~~~fFWm 101 (322)
++-..||+
T Consensus 78 DrEslf~l 85 (205)
T 1klf_A 78 DRESLFWM 85 (205)
T ss_dssp SSCEEEEE
T ss_pred CceEEEEE
Confidence 56789997
No 7
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.62 E-value=51 Score=24.48 Aligned_cols=55 Identities=11% Similarity=0.297 Sum_probs=33.3
Q ss_pred ceeeeCCceEEEEeccCCCe--EEEEEEcCCCceeEEeccCCCChhhHHHHHHHHHHhcCC
Q 020703 65 DQIVFPHEAVFEKVNQASGR--VYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123 (322)
Q Consensus 65 d~ii~P~d~~f~~V~~~tgR--VyvLkF~ss~~~~fFWmQe~~~~~D~~~~~kin~~i~~p 123 (322)
..|-+.+.+....++...++ +|.|. ..++. |.|+-.+.+.=.+|+..|+.++...
T Consensus 49 g~i~L~~~~~v~~~~~~~~~~~~F~i~--~~~r~--~~l~a~s~~e~~~Wi~ai~~~~~~~ 105 (115)
T 2dn6_A 49 GDILLDENCCVESLPDKDGKKCLFLVK--CFDKT--FEISASDKKKKQEWIQAIHSTIHLL 105 (115)
T ss_dssp EEECCCTTCEEEEECCCTTCCSEEEEE--CSSCE--EEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred cEEEecCcEEEEECCCCCCCeeEEEEE--eCCCE--EEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 34444444555556543444 55554 34444 4457777666678999999998754
No 8
>2xg5_A PAPD, chaperone protein PAPD; chaperone, chaperone-surface active protein complex; HET: EC2 EC5; 2.00A {Escherichia coli} PDB: 1pdk_A 2uy6_A 2uy7_A 2j2z_A 2xg4_A* 2w07_A* 3me0_A* 1n0l_A 2wmp_A 3dpa_A 2j7l_A 1qpp_A 1qpx_A
Probab=46.29 E-value=1.3e+02 Score=26.38 Aligned_cols=74 Identities=15% Similarity=0.357 Sum_probs=43.6
Q ss_pred eEecCCcee-ecC-CCcEEEEEeCCCC---ceEEEEeeCCCCC-c-ccceeeeCCceEEEEeccCCCeEEEEEEcC----
Q 020703 24 MTFDGKKVV-PDS-RKGLVRIARGEHG---LIHFQWLDRTRNV-V-EDDQIVFPHEAVFEKVNQASGRVYILKFNT---- 92 (322)
Q Consensus 24 ~~~~g~~V~-Pd~-rKG~l~l~~~~d~---l~hf~W~~R~~~~-~-edd~ii~P~d~~f~~V~~~tgRVyvLkF~s---- 92 (322)
+.+++++|. +-. +-..|.|.-.++. |++. |.+...+. . ...||+.|- +.|++...+.+.-+.+..
T Consensus 2 v~l~~TRvIy~~~~k~~sl~l~N~~~~~p~LvQs-Wi~~~~~~~~~~~pfivtPP---l~rl~p~~~q~lRI~~~~~~~~ 77 (218)
T 2xg5_A 2 VSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQA-WIENENQEKIITGPVIATPP---VQRLEPGAKSMVRLSTTPDISK 77 (218)
T ss_dssp EEESCSEEEEETTSSEEEEEEEECCSSSCEEEEE-EEECTTSCEECSSSEEEECS---EEEECTTCEEEEEEEECGGGGG
T ss_pred cEeCceEEEEeCCCCEEEEEEEcCCCCCcEEEEE-EEecCCCCccccCCEEEcCC---eEEECCCCceEEEEEecCCCCC
Confidence 346666543 333 3345566554444 5554 98765432 2 467999998 788888444444444433
Q ss_pred --CCceeEEec
Q 020703 93 --DDRKFFLWM 101 (322)
Q Consensus 93 --s~~~~fFWm 101 (322)
.++-..||+
T Consensus 78 lP~DrESlf~l 88 (218)
T 2xg5_A 78 LPQDRESLFYF 88 (218)
T ss_dssp SCSSSCEEEEE
T ss_pred CCCCceEEEEE
Confidence 357789997
No 9
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=37.79 E-value=1.7e+02 Score=26.02 Aligned_cols=79 Identities=10% Similarity=0.147 Sum_probs=46.0
Q ss_pred eceeeEecCCce-eecCCC-cEEEEEeCCCC--ceEEEEeeCCCCCcccceeeeCCceEEEEeccCCCeEEEEEEcC---
Q 020703 20 RAGKMTFDGKKV-VPDSRK-GLVRIARGEHG--LIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQASGRVYILKFNT--- 92 (322)
Q Consensus 20 kAGk~~~~g~~V-~Pd~rK-G~l~l~~~~d~--l~hf~W~~R~~~~~edd~ii~P~d~~f~~V~~~tgRVyvLkF~s--- 92 (322)
+|.=+.+++++| .|-..| ..|.|.-.++. |++ .|.+...+.....||+.|- +.|++...+.+.-+.+..
T Consensus 20 ~aa~v~l~~TRvIy~~~~k~~sl~l~N~~~~P~LvQ-sWv~~~~~~~~~pfivtPP---lfRlep~~~q~lRIi~~~~~L 95 (239)
T 4djm_A 20 RVFSLHLGATRVVYNPASSGETLTVINDQDYPMLVQ-SEVLSEDQKSPAPFVVTPP---LFRLDGQQSSRLRIVRTGGEF 95 (239)
T ss_dssp CEECCEESCSEEEECTTSSCEEEEEEECSSSCEEEE-EEEECTTSSSBCSEEEESS---EEEECTTEEEEEEEEECSCCC
T ss_pred eEEeEEEcceEEEEeCCCCEEEEEEEeCCCCcEEEE-EEEEcCCCCccCCEEEcCC---eEEECCCCceEEEEEECCCCC
Confidence 444466788765 443333 45566553332 444 4987655444568999998 778887333333333332
Q ss_pred -CCceeEEecc
Q 020703 93 -DDRKFFLWMQ 102 (322)
Q Consensus 93 -s~~~~fFWmQ 102 (322)
.+|-..||+=
T Consensus 96 P~DRESlf~ln 106 (239)
T 4djm_A 96 PPDRESLQWIC 106 (239)
T ss_dssp CSSSCEEEEEE
T ss_pred CCCceEEEEEE
Confidence 3577899974
No 10
>2kzb_A Autophagy-related protein 19; selective autophagy, ATG19, alpha-mannosidase, protein trans; NMR {Saccharomyces cerevisiae}
Probab=32.51 E-value=39 Score=26.85 Aligned_cols=53 Identities=15% Similarity=0.244 Sum_probs=32.7
Q ss_pred ceeecC-CCcEEEEEeCCCCceEEEEeeCCCCCcccceeeeCCceEEEEecc-CCCeEEEEEE
Q 020703 30 KVVPDS-RKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQ-ASGRVYILKF 90 (322)
Q Consensus 30 ~V~Pd~-rKG~l~l~~~~d~l~hf~W~~R~~~~~edd~ii~P~d~~f~~V~~-~tgRVyvLkF 90 (322)
+|+|-. +-=.|.+.+ .|.++||+-.+.+. +++||+|+|+.-.. .---|+..|.
T Consensus 4 ~~~~pn~~sL~Itvs~-rDnsL~F~lyNntn-------~~lpGnCtl~fs~~g~~ptv~si~m 58 (118)
T 2kzb_A 4 MVEPPNERSLQITMNQ-RDNSLYFQLFNNTN-------SVLAGNCKLKFTDAGDKPTTQIIDM 58 (118)
T ss_dssp -CCCSSCCCEEEEEEE-ETTEEEEEEEECSS-------SCCCSSCEECCCSSSSSCCCCCEEC
T ss_pred cccCCCCccEEEEEec-CCCeEEEEEecCCc-------eeccCccEEEEecCCCCceEEEEec
Confidence 444433 433455544 68899999988765 35699999987554 2223555554
No 11
>2ec1_A Nucleoporin 50 kDa; ranbp domain, nuclear pore-associated protein 60 kDa-like, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.86 E-value=2.1e+02 Score=22.81 Aligned_cols=105 Identities=8% Similarity=0.089 Sum_probs=59.2
Q ss_pred CCCcceEEEeceeeEecCCceeecCCCcEEEEEeCCCCceEEEEeeCCC-CCcccceeeeCCceEEEEeccCCCeEEEEE
Q 020703 11 AMQEILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTR-NVVEDDQIVFPHEAVFEKVNQASGRVYILK 89 (322)
Q Consensus 11 ~~~~~lvefkAGk~~~~g~~V~Pd~rKG~l~l~~~~d~l~hf~W~~R~~-~~~edd~ii~P~d~~f~~V~~~tgRVyvLk 89 (322)
-....|++.||=...++++ ---+..-|.|+|.+..++-.++.=+...+ +.+=...+|+|+ ..+++.. ..++.++.
T Consensus 10 E~E~~lf~~raKLf~~~~~-~WkERGvG~lki~~~k~~k~RllmR~d~~~~kv~lN~~i~~~-m~~~~~g--~~~~~~~~ 85 (125)
T 2ec1_A 10 KEEDAFYSKKCKLFYKKDN-EFKEKGIGTLHLKPTANQKTQLLVRADTNLGNILLNVLIPPN-MPCTRTG--KNNVLIVC 85 (125)
T ss_dssp CCCSCSEEEEEEEEEECSS-SEEEEEEEEEEEEECSSSSEEEEEEESSSSCCBSCCEECCSS-CCEECCT--TTEEEEEE
T ss_pred cCceeEEEEeeEEEEecCC-CcccccEEEEEeeecCCCcEEEEEEecCCCCEEEEeeEEcCC-CeEEecC--CCcEEEEE
Confidence 3456788888844444432 12233557788877667777766665554 677788888876 5565542 23444443
Q ss_pred EcC---CCc----eeEEeccCCCChhhHHHHHHHHHH
Q 020703 90 FNT---DDR----KFFLWMQEPKAEEDSQLCNSVNYF 119 (322)
Q Consensus 90 F~s---s~~----~~fFWmQe~~~~~D~~~~~kin~~ 119 (322)
... ++. ..-|=+.=++.+.=.+|...|++.
T Consensus 86 ~~~~~~d~~~~~~~~~~~lrfk~~e~a~~f~~~~~e~ 122 (125)
T 2ec1_A 86 VPNPPIDEKNATMPVTMLIRVKTSEDADELHKILLEK 122 (125)
T ss_dssp CCSSCSCSSSSSSCEEEEEECSSHHHHHHHHHHHHHH
T ss_pred ccCCcccCCCCCceEEEEEEECCHHHHHHHHHHHHHh
Confidence 322 111 334444445555555777777664
No 12
>1l4i_A SFAE protein; periplasmic chaperone, immunoglobulin fold; 2.20A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1
Probab=27.71 E-value=2.9e+02 Score=23.73 Aligned_cols=74 Identities=12% Similarity=0.404 Sum_probs=42.8
Q ss_pred eEecCCce-eecC-CCcEEEEEeCCC-C--ceEEEEeeCCCCCcccceeeeCCceEEEEeccCCCeEEEEE-EcC----C
Q 020703 24 MTFDGKKV-VPDS-RKGLVRIARGEH-G--LIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQASGRVYILK-FNT----D 93 (322)
Q Consensus 24 ~~~~g~~V-~Pd~-rKG~l~l~~~~d-~--l~hf~W~~R~~~~~edd~ii~P~d~~f~~V~~~tgRVyvLk-F~s----s 93 (322)
+.+++++| .+-. +-..|.|.-.++ . |++. |.+...+.....||+.|- +.|++...+.+.-+. +.. .
T Consensus 2 v~l~~TRvIy~~~~k~~sl~l~N~~~~~p~LvQs-Wv~~~~~~~~~pfivtPP---l~rl~p~~~q~lRI~~~~~~~lP~ 77 (206)
T 1l4i_A 2 VALGATRVIYPEGQKQVQLAVTNNDDKSSYLIQS-WIENAEGKKDARFVITPP---LFSMQGKKENTLRIIDATNGQMPE 77 (206)
T ss_dssp EEESCSEEEEETTCSEEEEEEEECCTTCEEEEEE-EEEETTSCBCSSEEEESS---EEEEESSEEEEEEEEECCTTCSCS
T ss_pred eEeCceEEEEeCCCcEEEEEEEeCCCCccEEEEE-EEecCCCCccCCEEEcCC---eEEECCCCceEEEEEecCCCCCCC
Confidence 34666654 3333 334555554333 2 4544 887654455678999998 778887444444444 222 2
Q ss_pred CceeEEec
Q 020703 94 DRKFFLWM 101 (322)
Q Consensus 94 ~~~~fFWm 101 (322)
++-..||+
T Consensus 78 DrEslf~l 85 (206)
T 1l4i_A 78 DRESLFWV 85 (206)
T ss_dssp SSCEEEEE
T ss_pred CceEEEEE
Confidence 46789997
No 13
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=27.45 E-value=1.5e+02 Score=22.12 Aligned_cols=51 Identities=6% Similarity=0.005 Sum_probs=32.0
Q ss_pred ceEEEEecc--CCCeEEEEEEcCCCceeEEeccCCCChhhHHHHHHHHHHhcCC
Q 020703 72 EAVFEKVNQ--ASGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123 (322)
Q Consensus 72 d~~f~~V~~--~tgRVyvLkF~ss~~~~fFWmQe~~~~~D~~~~~kin~~i~~p 123 (322)
.++...+.. ..++-|+++....+.+. |.|+-.+.+.=..|+..|+.++...
T Consensus 59 ~~~v~~~~~~~~~~~~~~f~i~~~~~r~-~~l~a~s~~e~~~Wi~al~~a~~~~ 111 (123)
T 1upq_A 59 SYNIRPDGPGAPRGRRFTFTAEHPGMRT-YVLAADTLEDLRGWLRALGRASRAE 111 (123)
T ss_dssp GCEEEECCSSCTTSSSSEEEEECTTSCC-EEEECSSHHHHHHHHHHHHHHHC--
T ss_pred CCEEEECCCCccCCCcEEEEEECCCCeE-EEEECCCHHHHHHHHHHHHHHHhcc
Confidence 355555543 45666777765544333 3477777666679999999998764
No 14
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=25.92 E-value=2.3e+02 Score=21.95 Aligned_cols=49 Identities=18% Similarity=0.152 Sum_probs=30.9
Q ss_pred ceEEEEeccCCCe--EEEEEEcCCCceeEEeccCCCChhhHHHHHHHHHHhcCC
Q 020703 72 EAVFEKVNQASGR--VYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123 (322)
Q Consensus 72 d~~f~~V~~~tgR--VyvLkF~ss~~~~fFWmQe~~~~~D~~~~~kin~~i~~p 123 (322)
.+........+.| ||.|+ ..+.+. |-||-.+.+.=.+|+..|+.+|...
T Consensus 76 ~~~v~~~~~~~kr~~~F~l~--t~~~~~-yl~qA~s~~e~~~Wi~aI~~~i~~~ 126 (129)
T 2p0d_A 76 GAALAHGRHLSSRRNVLHIR--TIPGHE-FLLQSDHETELRAWHRALRTVIERL 126 (129)
T ss_dssp TCEEEECTTSCSSSSEEEEE--CTTSCE-EEEECSCHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEECCCCCCCCcEEEEE--cCCCCE-EEEECCCHHHHHHHHHHHHHHHHhc
Confidence 3444444333445 66655 334333 3389888877779999999998754
No 15
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=23.85 E-value=73 Score=24.41 Aligned_cols=41 Identities=15% Similarity=0.185 Sum_probs=26.8
Q ss_pred CCeEEEEEEcCCCceeEEeccCCCChhhHHHHHHHHHHhcCC
Q 020703 82 SGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123 (322)
Q Consensus 82 tgRVyvLkF~ss~~~~fFWmQe~~~~~D~~~~~kin~~i~~p 123 (322)
+.|-|+++....+.+. |.+|-.+.+.=.+|+..||.+|+.+
T Consensus 81 ~kr~~~F~l~t~~~~~-~lfqA~s~~e~~~Wi~ai~~~i~~~ 121 (122)
T 1dro_A 81 TKKKHVLRVKLANGAL-FLLQAHDDTEMSQWVTSLKAQSDST 121 (122)
T ss_dssp SSSTTEEEEECSSSCE-EEEECSSSHHHHHHHHHHHHHHTCC
T ss_pred CCCCeEEEEEEcCCCE-EEEECCCHHHHHHHHHHHHHHHHhc
Confidence 3444444443333333 3478888887889999999998764
No 16
>2f6m_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomes, trafficking complex, vacuole protei sorting, ESCRT protein complexes; HET: DDQ; 2.10A {Saccharomyces cerevisiae} SCOP: a.2.17.1 PDB: 2f66_A*
Probab=22.25 E-value=94 Score=22.59 Aligned_cols=32 Identities=13% Similarity=0.367 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHcCcccccccCCCcccccccHHHHHHHHHHhhcc
Q 020703 248 FRQQVDSFTYVLKTGQIDLSQFGVDPSKYKFTVLSFLEALEDSVSK 293 (322)
Q Consensus 248 FqQAl~~ls~AL~sG~l~l~qfGl~~~~~~~~VeaFl~al~~~~~k 293 (322)
.-.++-.|+.||+.|.+ +++.|++-++..+++
T Consensus 18 ieDaiy~L~~aL~~g~I--------------~l~~ylK~vR~LaRe 49 (65)
T 2f6m_A 18 LTDTIEALSRMLHRGTI--------------PLDTFVKQGRELARQ 49 (65)
T ss_dssp HHHHHHHHHHHHHHTSS--------------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCC--------------CHHHHHHHHHHHHHH
Confidence 34577889999999886 677788877765543
No 17
>1pfj_A TFIIH basal transcription factor complex P62 subunit; PH/PTB domain, structural proteomics in europe, spine, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.9 PDB: 2rnr_B
Probab=22.01 E-value=2.3e+02 Score=22.48 Aligned_cols=56 Identities=5% Similarity=0.108 Sum_probs=31.9
Q ss_pred cEEEEEeCCCCceEEEEeeCCCCCcccceeeeCCceEEEEecc-CCCeEEEEEEcCCCceeEEe
Q 020703 38 GLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQ-ASGRVYILKFNTDDRKFFLW 100 (322)
Q Consensus 38 G~l~l~~~~d~l~hf~W~~R~~~~~edd~ii~P~d~~f~~V~~-~tgRVyvLkF~ss~~~~fFW 100 (322)
|+|+|.. | |+.|.+...+ +-.+.+.-.+++=.++.+ ..-+|-+=-|..++.-|-|=
T Consensus 22 GtL~l~~--d---~i~W~p~~~~--~~~vs~~~~~I~~qq~SP~~k~KVqLqi~l~~~~~~~F~ 78 (108)
T 1pfj_A 22 GALYLMA--E---RIAWAPEGKD--RFTISHMYADIKCQKISPEGKAKIQLQLVLHAGDTTNFH 78 (108)
T ss_dssp CEEEEET--T---EEEEECSSSS--SCSEEEETTTCCCEEECCSSSSSCEEEEECSSSCEEEEE
T ss_pred ceEEEEc--c---eEEEccCCCC--CceEEEehhhhhcceeCCCCCccEEEEEEEeCCCceEEE
Confidence 9999986 3 9999996553 334444445566566655 44455443333333333333
No 18
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=20.87 E-value=1.9e+02 Score=21.85 Aligned_cols=38 Identities=5% Similarity=0.107 Sum_probs=28.0
Q ss_pred eEEEEEEcCCCceeEEeccCCCChhhHHHHHHHHHHhcCCc
Q 020703 84 RVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRPL 124 (322)
Q Consensus 84 RVyvLkF~ss~~~~fFWmQe~~~~~D~~~~~kin~~i~~p~ 124 (322)
.||-|++.. .+ -|.+|-.+.+.=.+|+..|+..+....
T Consensus 67 ~~F~l~~~~-~~--~y~f~A~s~ee~~~Wi~ai~~~~~~~~ 104 (112)
T 3cxb_B 67 HAFQVILSD-RP--CLELSAESEAEMAEWMQHLCQAVSKGV 104 (112)
T ss_dssp TEEEEEETT-SC--CEEEECSSHHHHHHHHHHHHHHHTCC-
T ss_pred eEEEEEcCC-CC--EEEEEcCCHHHHHHHHHHHHHHhhccc
Confidence 388887642 22 355898888878899999999988743
No 19
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=20.13 E-value=1.3e+02 Score=22.73 Aligned_cols=37 Identities=27% Similarity=0.192 Sum_probs=24.9
Q ss_pred EEEEEEcCCCceeEEeccCCCChhhHHHHHHHHHHhcCCc
Q 020703 85 VYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRPL 124 (322)
Q Consensus 85 VyvLkF~ss~~~~fFWmQe~~~~~D~~~~~kin~~i~~p~ 124 (322)
||.|+. .+.+. |-+|-.+.+.=.+|+..|+.+++..+
T Consensus 84 ~F~i~~--~~~~~-~~f~A~s~~e~~~Wi~ai~~~~~~~~ 120 (123)
T 1wjm_A 84 VFKLGL--QDGKE-YLFQAKDEAEMSSWLRVVNAAIASGP 120 (123)
T ss_dssp EEEEEC--SSSCE-EEEECSSHHHHHHHHHHHHHHHHHCC
T ss_pred EEEEEE--cCCcE-EEEECCCHHHHHHHHHHHHHHHhccC
Confidence 555543 33233 34787777777799999999987654
No 20
>2llw_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=20.11 E-value=46 Score=24.44 Aligned_cols=23 Identities=17% Similarity=0.423 Sum_probs=16.1
Q ss_pred CHHHHHHHhcChhHHHHHHHHHH
Q 020703 235 TPEELLELLQSPPFRQQVDSFTY 257 (322)
Q Consensus 235 t~e~L~~~lrSPQFqQAl~~ls~ 257 (322)
++..+.+.+.+|.|++-+..|..
T Consensus 41 NP~~~~k~~~nP~v~~~i~kl~~ 63 (71)
T 2llw_A 41 NPAALQEHMKNPEVFKKIQTLIA 63 (71)
T ss_dssp CHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CHHHHHHHHhCHHHHHHHHHHHH
Confidence 45677777777777777776644
No 21
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=20.02 E-value=4.7e+02 Score=23.35 Aligned_cols=77 Identities=25% Similarity=0.482 Sum_probs=41.9
Q ss_pred ceeeEecCCce-eecCCC-cEEEEEeCCCC--ceEEEEeeCCCCC--c---ccceeeeCCceEEEEeccCCCeEEEEEEc
Q 020703 21 AGKMTFDGKKV-VPDSRK-GLVRIARGEHG--LIHFQWLDRTRNV--V---EDDQIVFPHEAVFEKVNQASGRVYILKFN 91 (322)
Q Consensus 21 AGk~~~~g~~V-~Pd~rK-G~l~l~~~~d~--l~hf~W~~R~~~~--~---edd~ii~P~d~~f~~V~~~tgRVyvLkF~ 91 (322)
|| +.+++++| .+-..| ..|.|.-.++. |++. |.+...+. . ...||+.|- +.|++...+.+.-+.+.
T Consensus 28 A~-v~i~~TRvIy~~~~k~~sl~l~N~~~~P~LvQs-Wid~~~~~~~p~~~~~pfivtPP---l~rl~pg~~q~lRI~~~ 102 (257)
T 3q48_A 28 AG-LIAQGTRVVFPASEREVTLRVSNTSGTPVLAQA-WIDDGRQDVPPEELQVPFSVTPA---VTRVEPNGGAVLRIAYL 102 (257)
T ss_dssp ----CCSCSEEEEETTCSEEEEEEEECSSSCEEEEE-EEESSCCSSCGGGGCCSEEEESS---EEEECTTEEEEEEEEEC
T ss_pred ee-EEEcceEEEEeCCCcEEEEEEEeCCCCeEEEEE-EEEcCCCccCcccccCCEEEcCC---EEEECCCCceEEEEEEC
Confidence 44 45677665 343333 45556554332 4444 98865432 1 246999998 77888734444444443
Q ss_pred C----CCceeEEecc
Q 020703 92 T----DDRKFFLWMQ 102 (322)
Q Consensus 92 s----s~~~~fFWmQ 102 (322)
. .++-..||+=
T Consensus 103 ~~~LP~DrESlf~ln 117 (257)
T 3q48_A 103 KAPLPTDRESLFWLN 117 (257)
T ss_dssp CCCCCSSSCEEEEEE
T ss_pred CCCCCCCceeEEEEE
Confidence 3 2566888864
Done!