BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>020708
MAASVSSLTFPFFNSKPHFKISQNNVDNPLIATNNQIQSLFVFSKSKPFSTFQSRRHLGP
LVSSCFPTRASFSSDMFPDNITEEERILPVTEETPLKFLLWVVFWASLSLVWFSTSGDAN
AAVDSIRASAIGLKIATALRRSSWPDEAVVFALATLPVLELRGAIPVGYWMQLKPVLLTV
LSVLGNMVPVPFIILYLKKFASFLAGKNRSASQFLDMLFQKAKEKAGPVEEFQWLGLMLF
VAVPFPGTGAWTGAFIAAILDMPFWSALSANFFGVVIAGLLVNLLVNLGLKYAIVTGAIL
FIISTFMWSTLRSIRKSLGSSS

High Scoring Gene Products

Symbol, full name Information P value
AT2G02590 protein from Arabidopsis thaliana 4.3e-86
DET0746
Putative uncharacterized protein 		protein from Dehalococcoides ethenogenes 195 2.1e-20
DET_0746
conserved hypothetical protein 		protein from Dehalococcoides ethenogenes 195 2.1e-20

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  020708
        (322 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2065248 - symbol:AT2G02590 "AT2G02590" species...   861  4.3e-86   1
UNIPROTKB|Q3Z8G8 - symbol:DET0746 "Putative uncharacteriz...   241  2.1e-20   1
TIGR_CMR|DET_0746 - symbol:DET_0746 "conserved hypothetic...   241  2.1e-20   1


>TAIR|locus:2065248 [details] [associations]
            symbol:AT2G02590 "AT2G02590" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] GO:GO:0009507 EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC004136 EMBL:AY086687 EMBL:AY954777
            EMBL:AK226603 IPI:IPI00547248 PIR:T00604 RefSeq:NP_178363.1
            UniGene:At.41478 EnsemblPlants:AT2G02590.1 GeneID:814789
            KEGG:ath:AT2G02590 TAIR:At2g02590 eggNOG:COG2426
            HOGENOM:HOG000006195 InParanoid:O64717 OMA:SILDMPF PhylomeDB:O64717
            ProtClustDB:CLSN2683697 Genevestigator:O64717 InterPro:IPR009577
            Pfam:PF06695 Uniprot:O64717
        Length = 324

 Score = 861 (308.1 bits), Expect = 4.3e-86, P = 4.3e-86
 Identities = 181/288 (62%), Positives = 214/288 (74%)

Query:    46 SKPFST-FQSRRHLGPLVSSCF-PTRASF-----SSDMFPDNITEEER---I--LPVTEE 93
             S P S  ++  R L    SS F P R +F     S D F  N  ++E    I  LP    
Sbjct:    35 SYPISPKWKQIRFLQSQSSSLFYPLRRNFTRFCSSPDGFLRNTKDDEEGNEIIQLPSIGV 94

Query:    94 TPLKFLLWVVFWASLSLVWFSTSGDANAAVDSIRASAIGLKIATALRRSSWPDEAVVFAL 153
              P+KF + VV WAS SL+WF+ SGDA AA DSI++S+ GL+IA+ LRR  WPDEAVVFAL
Sbjct:    95 NPVKFAICVVLWASFSLLWFARSGDAKAATDSIKSSSFGLRIASTLRRFGWPDEAVVFAL 154

Query:   154 ATLPVLELRGAIPVGYWMQLKPVLLTVLSVLGNMVPVPFIILYLKKFASFLAGKNRSASQ 213
             ATLPV+ELRGAIPVGYWMQLKPV+LT  SVLGNMVPVPFI+LYLK FASF+AGK+++AS+
Sbjct:   155 ATLPVIELRGAIPVGYWMQLKPVVLTSFSVLGNMVPVPFIVLYLKTFASFVAGKSQTASK 214

Query:   214 FLDMLFQKAKEKAGPVEEFQWLGLMLFVAVPFPGTGAWTGAFIAAILDMPFWSALSANFF 273
              LD+LF++AKEKAGPVEEF+WLGLMLFVAVPFPGTGAWTGA IA+ILDMPFWSA+S+NF 
Sbjct:   215 LLDILFKRAKEKAGPVEEFKWLGLMLFVAVPFPGTGAWTGAIIASILDMPFWSAVSSNFC 274

Query:   274 GVVIAXXXXXXXXXXXXKYAIVTGAILFIISTFMWSTLRSIRKSLGSS 321
             GVV+A            K AIV G  LF +STFMWS LR+IRKS+  S
Sbjct:   275 GVVLAGLLVNLLVNLGLKQAIVAGIALFFVSTFMWSVLRNIRKSIKPS 322


>UNIPROTKB|Q3Z8G8 [details] [associations]
            symbol:DET0746 "Putative uncharacterized protein"
            species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG2426
            InterPro:IPR009577 Pfam:PF06695 RefSeq:YP_181481.1 STRING:Q3Z8G8
            GeneID:3229945 KEGG:det:DET0746 PATRIC:21608555
            HOGENOM:HOG000230395 OMA:WAYLIAL ProtClustDB:CLSK837318
            BioCyc:DETH243164:GJNF-747-MONOMER Uniprot:Q3Z8G8
        Length = 177

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 58/163 (35%), Positives = 89/163 (54%)

Query:   145 PDEAVVFALATLPVLELRGAIPVGYWMQLKPVLLTVLSVL-GNMVPVPFIILYLKKFASF 203
             P E +VF ++ +PV ELRGA+P+   +   P     L  L GN++PVPFI+  L+K  + 
Sbjct:     4 PPELLVFLVSAVPVSELRGALPLAINVLGIPWYWAYLIALAGNLLPVPFILFLLEKVLAL 63

Query:   204 LAGKNRSASQFLDMLFQKAKEKAGPVEEFQWLGLMLFVAVPFPGTGAWTGAFIAAILDMP 263
             L G      +F D +    K+++ PVE ++ +GL+L VAVP P TGAWTG+ +A +L + 
Sbjct:    64 L-GHFAFIRKFTDWIVDLGKKRSAPVERYKRIGLLLLVAVPLPFTGAWTGSLVAVVLGLD 122

Query:   264 FWSALSANFFGVVIAXXXXXXXXXXXXKYAIVTGAILFIISTF 306
                AL     GVV+A              A++ G +L  ++ F
Sbjct:   123 RKEALIYISLGVVVAGVVVTCLCLLGWFGALMAGLVLSGVAVF 165


>TIGR_CMR|DET_0746 [details] [associations]
            symbol:DET_0746 "conserved hypothetical protein"
            species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG2426
            InterPro:IPR009577 Pfam:PF06695 RefSeq:YP_181481.1 STRING:Q3Z8G8
            GeneID:3229945 KEGG:det:DET0746 PATRIC:21608555
            HOGENOM:HOG000230395 OMA:WAYLIAL ProtClustDB:CLSK837318
            BioCyc:DETH243164:GJNF-747-MONOMER Uniprot:Q3Z8G8
        Length = 177

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 58/163 (35%), Positives = 89/163 (54%)

Query:   145 PDEAVVFALATLPVLELRGAIPVGYWMQLKPVLLTVLSVL-GNMVPVPFIILYLKKFASF 203
             P E +VF ++ +PV ELRGA+P+   +   P     L  L GN++PVPFI+  L+K  + 
Sbjct:     4 PPELLVFLVSAVPVSELRGALPLAINVLGIPWYWAYLIALAGNLLPVPFILFLLEKVLAL 63

Query:   204 LAGKNRSASQFLDMLFQKAKEKAGPVEEFQWLGLMLFVAVPFPGTGAWTGAFIAAILDMP 263
             L G      +F D +    K+++ PVE ++ +GL+L VAVP P TGAWTG+ +A +L + 
Sbjct:    64 L-GHFAFIRKFTDWIVDLGKKRSAPVERYKRIGLLLLVAVPLPFTGAWTGSLVAVVLGLD 122

Query:   264 FWSALSANFFGVVIAXXXXXXXXXXXXKYAIVTGAILFIISTF 306
                AL     GVV+A              A++ G +L  ++ F
Sbjct:   123 RKEALIYISLGVVVAGVVVTCLCLLGWFGALMAGLVLSGVAVF 165


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.135   0.412    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      322       310   0.00079  116 3  11 22  0.46    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  619 (66 KB)
  Total size of DFA:  205 KB (2112 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.98u 0.13s 24.11t   Elapsed:  00:00:01
  Total cpu time:  23.98u 0.13s 24.11t   Elapsed:  00:00:01
  Start:  Fri May 10 05:01:28 2013   End:  Fri May 10 05:01:29 2013

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