Query 020711
Match_columns 322
No_of_seqs 122 out of 209
Neff 5.6
Searched_HMMs 46136
Date Fri Mar 29 04:32:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020711.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020711hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0317 Predicted E3 ubiquitin 100.0 9E-47 2E-51 352.8 13.7 239 10-321 5-247 (293)
2 PF04757 Pex2_Pex12: Pex2 / Pe 100.0 1.8E-29 3.9E-34 230.0 20.0 202 24-258 1-211 (229)
3 COG5574 PEX10 RING-finger-cont 97.6 5.3E-06 1.2E-10 78.2 -3.3 67 7-87 14-80 (271)
4 KOG2879 Predicted E3 ubiquitin 69.5 7.3 0.00016 37.7 4.6 70 17-87 14-88 (298)
5 KOG0826 Predicted E3 ubiquitin 64.3 1.6E+02 0.0035 29.4 13.0 98 16-118 19-130 (357)
6 KOG0317 Predicted E3 ubiquitin 49.4 1.7 3.6E-05 42.1 -3.5 58 62-119 4-61 (293)
7 PF04088 Peroxin-13_N: Peroxin 43.6 70 0.0015 28.5 6.0 79 34-116 68-157 (158)
8 PF06271 RDD: RDD family; Int 27.0 2.3E+02 0.005 22.7 6.3 41 55-96 53-93 (137)
9 PF13972 TetR: Bacterial trans 23.6 78 0.0017 26.6 2.9 98 11-117 42-143 (146)
10 PF14780 DUF4477: Domain of un 19.7 1.8E+02 0.0039 26.2 4.5 52 8-64 7-58 (188)
No 1
>KOG0317 consensus Predicted E3 ubiquitin ligase, integral peroxisomal membrane protein [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9e-47 Score=352.81 Aligned_cols=239 Identities=30% Similarity=0.457 Sum_probs=190.3
Q ss_pred CCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHhcchhHHHhhhhHHHHHHHHHHHHHHhcCCCCCcchhhhccEeecCCC
Q 020711 10 PPAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGEEYCDITQVVGPQ 89 (322)
Q Consensus 10 P~A~qPeIIRA~QKDe~y~~~L~~~l~dvlr~l~G~R~~~~~~~Ei~lls~lLY~~LTTl~G~QTLGEEYcdIvqV~~~~ 89 (322)
++|++|||||++||||+|.+.+.++++++++.++|+|.|++|++|+..+|+++||..||..++|||||||++|+++|+..
T Consensus 5 ~~a~~p~ivr~tq~de~~~~~l~~~~s~~~~~lag~r~~i~~~~~l~~~a~~ly~~~at~~~~~tlgEEy~~i~~~~~~~ 84 (293)
T KOG0317|consen 5 AHADPPEIVRSTQKDEYYIGYLISSLSGLSRTLAGPRAWIRYRKELVLIAEVLYFGFATDARYQTLGEEYVSIIESNPLR 84 (293)
T ss_pred cccCchHHHHHhhhHHHhhhhhhhhhHhHhhhhcchHHHHhhccchhhhhchhhheeehhccccccchhhhhhheecCCc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhccchhhhhhhccCCCCcccccccCCCCCCcchhhhHHHHHH
Q 020711 90 RLPPTPARRALFIVYQTAVPYIAERISSRVASRGIALAESQSDEFDRYNAAGSSRDQSLETIESPSSSAPRVYSAVSRLK 169 (322)
Q Consensus 90 ~~~Ps~~RR~l~Ill~~l~PYll~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 169 (322)
.++|+..+|..||++|.+.||+.+|+.+++... +++. +. ..+.
T Consensus 85 ~~~pssl~~~~~v~~~~v~~~~~~~l~~~l~q~--------l~~~-------------~~--------------i~p~-- 127 (293)
T KOG0317|consen 85 LRLPSSLRRIVFVASHLVLPLLLDKLTKKLMQA--------LQSS-------------SE--------------ILPQ-- 127 (293)
T ss_pred cccCchhhhHHHHHHHHHHHHHhHHHHHHHHHh--------hccC-------------cc--------------cccH--
Confidence 999999999999999999999999998886321 1000 00 1111
Q ss_pred HHHhhHHHHHHhhCCcchHHHHHHHHHHHHHHHHHHhhcccccchhhhhcCceeeeeC----CCCCCCcchhHHHHHHHH
Q 020711 170 EKLNGLRLYVIRRWPMVLPIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFIG----KPTNQRPRYQILGVFLLI 245 (322)
Q Consensus 170 ~~~~~~~~~~~~~l~~~~~~~~~~l~~l~rlHLalFY~~G~YY~lsKRl~GIrYv~~~----~~~~~r~sY~lLG~llll 245 (322)
.++. +.++ +..+.++|+++|||.|.||||+||++|||||+.+ ++.+.+..|++|||++|+
T Consensus 128 --~~~~-------------~l~~-l~~v~~~h~~lFY~~g~~y~IskRltgI~yv~~~~~~~~~~~~~q~y~iLg~I~L~ 191 (293)
T KOG0317|consen 128 --ARRN-------------FLRG-LFAVLRAHKALFYINGSFYSISKRLTGIRYVLARTLKGHEANASQPYKILGYILLI 191 (293)
T ss_pred --HHHH-------------Hhhh-HHHHHHHhhheEEecCchHHHHHhhccceEEEEecccccccccccceeeechhhHH
Confidence 0100 1122 2277899999999999999999999999999985 455678999999999999
Q ss_pred HHHHHHHHhhhhhcccccccccccccccccccccCCCcccccccCCCCCCCCCCCCccccCCcCcccccccccccc
Q 020711 246 QLCIIAAEGLRRSNLSSIASSVHHTSLGFQQASTGRGLPVLNEEGSLIPSESDKGGWVLDSTSTSEVCLKCTNLIM 321 (322)
Q Consensus 246 QL~v~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~c~lcl~ 321 (322)
|+++.....+-. +.+.|+.+.+++.+ ++++.... -.|-++.++.++..+||+|||+
T Consensus 192 ql~~slg~r~~~-------------s~~q~~~s~~e~~~----e~~~~~~~---~~~s~~~~~i~~a~~kC~LCLe 247 (293)
T KOG0317|consen 192 QLLLSLGSRLYA-------------SFLQHKRSSTESIE----ESKLNHSK---LEDSNSLSSIPEATRKCSLCLE 247 (293)
T ss_pred HHHHhhhhHHHH-------------HHHhcccccccccc----cccccccc---hhhccCCccCCCCCCceEEEec
Confidence 977665444331 45666666666655 22221111 1143455568888999999997
No 2
>PF04757 Pex2_Pex12: Pex2 / Pex12 amino terminal region; InterPro: IPR006845 This region is the N-terminal part of a number of peroxisomal biogenesis proteins, including Pex2, Pex10 and Pex12, which contain two predicted transmembrane segments. The majority of these proteins have a C-terminal ring finger domain IPR001841 from INTERPRO.; GO: 0007031 peroxisome organization, 0005778 peroxisomal membrane
Probab=99.97 E-value=1.8e-29 Score=230.00 Aligned_cols=202 Identities=30% Similarity=0.381 Sum_probs=159.4
Q ss_pred hHHHHHHHHHHHHHHHHHhc---chhHHHhhhhHHHHHHHHHHHHHHhcCCCCCcchhhhccEeecCC---C-CCCCchh
Q 020711 24 DEQYASFIYDACRDAFRQLF---GTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGEEYCDITQVVGP---Q-RLPPTPA 96 (322)
Q Consensus 24 De~y~~~L~~~l~dvlr~l~---G~R~~~~~~~Ei~lls~lLY~~LTTl~G~QTLGEEYcdIvqV~~~---~-~~~Ps~~ 96 (322)
|+++.+.|+++++++++.+. |++++++|.+|+.++.+++|+.+|+..+.||+|||||||.+|+.. . +..|+..
T Consensus 1 d~~l~~~L~~~l~~i~~~l~~~~~~~~~~~~~~Ei~~ll~~l~~~~tl~~~~~T~gE~~~~L~r~~~~~~~~~~~~ls~~ 80 (229)
T PF04757_consen 1 DEELESLLKPALSYILQYLAQPRGPRRLLRYFDEIFLLLKLLYESLTLLRGNQTFGEEFYGLKRVNSRSSSRERRPLSRR 80 (229)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHhhCeEEeeccccccccCCCCHH
Confidence 89999999999999999999 999999999999999999999999999999999999999999832 3 7889999
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhccchhhhhhhccCCCCcccccccCCCCCCcchhhhHHHHHHHHHhhHH
Q 020711 97 RRALFIVYQTAVPYIAERISSRVASRGIALAESQSDEFDRYNAAGSSRDQSLETIESPSSSAPRVYSAVSRLKEKLNGLR 176 (322)
Q Consensus 97 RR~l~Ill~~l~PYll~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 176 (322)
+|.+++++.+++||+.+|+...+.+...... +.... ..... ...+++.+.++.+
T Consensus 81 ~r~~~l~~~vl~PYl~~Kl~~~~~~~~~~~~-----~~~~~-----------------~~~~~----~~~~~~~~~~~~~ 134 (229)
T PF04757_consen 81 QRLLSLLLLVLGPYLKEKLDSLLERLSERSA-----ESISS-----------------RSARA----RRARLKSKLKRRF 134 (229)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccc-----ccccc-----------------hhhhh----hhhHHHHHHHHHH
Confidence 9999999999999999999877644311000 00000 00000 0001111111111
Q ss_pred HHHHhhCCcchHHHHHHHHHHHHHHHHHHhhccc-ccchhhhhcCceeeeeC-CCCCCCcchhHHHHHHHHHHHHHHHHh
Q 020711 177 LYVIRRWPMVLPIVREFLQLVLRANLMFFYFEGL-YYHISKRTAGIRYVFIG-KPTNQRPRYQILGVFLLIQLCIIAAEG 254 (322)
Q Consensus 177 ~~~~~~l~~~~~~~~~~l~~l~rlHLalFY~~G~-YY~lsKRl~GIrYv~~~-~~~~~r~sY~lLG~llllQL~v~~~~~ 254 (322)
-.+.|.++.+...+..+|+++||+.|+ ||++++|++||+|++.. ++....++|+++|.+++.|+++..+..
T Consensus 135 -------~~~~~~~~~~~~~~~~~~~~~Fl~~g~~y~s~~~rllgi~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 207 (229)
T PF04757_consen 135 -------VKLYPYLNALYELLNLLHLLLFLLGGTPYYSPSKRLLGIRYVRLSPSDLQRNPSYEFLGRQLLWQLLSEFLLF 207 (229)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhCcEEEECCccchhhhccHHHHHHHHHHHHHHHHHHH
Confidence 124456788889999999999999999 99999999999999983 344455999999999999999999998
Q ss_pred hhhh
Q 020711 255 LRRS 258 (322)
Q Consensus 255 lr~~ 258 (322)
+.+.
T Consensus 208 ~~~~ 211 (229)
T PF04757_consen 208 LLPL 211 (229)
T ss_pred HHHH
Confidence 8865
No 3
>COG5574 PEX10 RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.56 E-value=5.3e-06 Score=78.19 Aligned_cols=67 Identities=15% Similarity=0.041 Sum_probs=56.5
Q ss_pred CCCCCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHhcchhHHHhhhhHHHHHHHHHHHHHHhcCCCCCcchhhhccEeec
Q 020711 7 RRFPPAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGEEYCDITQVV 86 (322)
Q Consensus 7 ~~fP~A~qPeIIRA~QKDe~y~~~L~~~l~dvlr~l~G~R~~~~~~~Ei~lls~lLY~~LTTl~G~QTLGEEYcdIvqV~ 86 (322)
.++++|+.+-+++++|+ .++ ++++.+....-+-+.+..+.++..+++|+..+| |.||||+|++.-.
T Consensus 14 lr~~~~~~~~~~Q~~~~---~~g------~~~i~~~~s~~~~n~~~~p~~v~~~~~~~p~~s-----t~~eE~vd~~~~~ 79 (271)
T COG5574 14 LRNKRADLESVRQFAES---IEG------SNAISRRRSRFFSNVPGYPMDVREKILERPSGS-----TSEEEAVDLIAAI 79 (271)
T ss_pred eecccccchhHHHHHHH---Hhh------hhhhhhhhhhhcccCCCCccchHHHhcccCccc-----cccchhhhhhhhc
Confidence 56899999999999998 222 566666777778899999999999999998888 9999999998765
Q ss_pred C
Q 020711 87 G 87 (322)
Q Consensus 87 ~ 87 (322)
+
T Consensus 80 r 80 (271)
T COG5574 80 R 80 (271)
T ss_pred c
Confidence 4
No 4
>KOG2879 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=69.55 E-value=7.3 Score=37.70 Aligned_cols=70 Identities=11% Similarity=0.150 Sum_probs=52.6
Q ss_pred hhhhhhhhHHHH-----HHHHHHHHHHHHHhcchhHHHhhhhHHHHHHHHHHHHHHhcCCCCCcchhhhccEeecC
Q 020711 17 IMRAAEKDEQYA-----SFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGEEYCDITQVVG 87 (322)
Q Consensus 17 IIRA~QKDe~y~-----~~L~~~l~dvlr~l~G~R~~~~~~~Ei~lls~lLY~~LTTl~G~QTLGEEYcdIvqV~~ 87 (322)
|-|=+|=|+-+. ..+.+++.+++...+ +--..++++|.+++-+.+=-.++-.+-.-|-|.-=.++.+.+.
T Consensus 14 v~Rv~QlDai~Ldkdls~~l~~qf~~~F~~~~-p~~~~r~epe~~~vl~~~iw~~si~~~~~T~Gqall~v~y~~e 88 (298)
T KOG2879|consen 14 VPRVNQLDAILLDKDLSFLLWSQFVSIFLYYK-PGLLLRVEPELDAVLDSAIWFFSIYSVDDTVGQALLNVAYIFE 88 (298)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhcC-chhhhhhcHHHhHHHHHHHHheeccCCCCcccchhhhHHhhhc
Confidence 556677766554 467788888886543 3444799999999999888888888888888888777776553
No 5
>KOG0826 consensus Predicted E3 ubiquitin ligase involved in peroxisome organization [Posttranslational modification, protein turnover, chaperones]
Probab=64.34 E-value=1.6e+02 Score=29.45 Aligned_cols=98 Identities=16% Similarity=0.207 Sum_probs=57.4
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHhcch---hHHHhhhhHHHHHHHHH--HHHHHhcCCCCCcchhhhccEeecCC--
Q 020711 16 EIMRAAEKDEQYASFIYDACRDAFRQLFGT---RVAVAYQSETKLVGQML--YYVLTTGSGQQTLGEEYCDITQVVGP-- 88 (322)
Q Consensus 16 eIIRA~QKDe~y~~~L~~~l~dvlr~l~G~---R~~~~~~~Ei~lls~lL--Y~~LTTl~G~QTLGEEYcdIvqV~~~-- 88 (322)
||+-+.+=|.-..-.|+--+. ++- ++-. .+.++|..|+-.+-+++ |+-|-|-.+ +-+|-+-++=....+
T Consensus 19 Ei~Asq~L~t~lrpAL~~ll~-~~A-~~~~~~~~~l~r~fdE~f~~l~liLq~hyLr~~~s--SF~E~fYgLqr~ss~dr 94 (357)
T KOG0826|consen 19 EIMASQELDTLLRPALQYLLK-YFA-LRPPRYLLRLLRYFDEWFQALDLILQWHYLRTYNS--SFIESFYGLQRISSRDR 94 (357)
T ss_pred hhHhhhhHHHhhHHHHHHHHH-HHH-hCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--cHHHhhhhhhhhhcccc
Confidence 566666655544333333222 221 2221 23678888887777665 444555443 678888887554322
Q ss_pred ------CC-CCCchhHHHHHHHHHhhhHHHHHHHHHH
Q 020711 89 ------QR-LPPTPARRALFIVYQTAVPYIAERISSR 118 (322)
Q Consensus 89 ------~~-~~Ps~~RR~l~Ill~~l~PYll~r~~~~ 118 (322)
.+ .++. ..|++.++..++.||+-.|+-..
T Consensus 95 l~se~~~~~~l~k-rQr~~s~~~lv~lPYv~~KL~~i 130 (357)
T KOG0826|consen 95 LTSEWPQGLGLNK-RQRIVSFLFLVILPYVEAKLDEI 130 (357)
T ss_pred ccccccCCCCcch-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 2333 36788889999999998886443
No 6
>KOG0317 consensus Predicted E3 ubiquitin ligase, integral peroxisomal membrane protein [Posttranslational modification, protein turnover, chaperones]
Probab=49.41 E-value=1.7 Score=42.14 Aligned_cols=58 Identities=19% Similarity=0.055 Sum_probs=51.3
Q ss_pred HHHHHHhcCCCCCcchhhhccEeecCCCCCCCchhHHHHHHHHHhhhHHHHHHHHHHH
Q 020711 62 LYYVLTTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRV 119 (322)
Q Consensus 62 LY~~LTTl~G~QTLGEEYcdIvqV~~~~~~~Ps~~RR~l~Ill~~l~PYll~r~~~~~ 119 (322)
.|++.++..+.+|.++|||+..++..-.+..++...+..++-....++++.+.+.-.+
T Consensus 4 ~~~a~~p~ivr~tq~de~~~~~l~~~~s~~~~~lag~r~~i~~~~~l~~~a~~ly~~~ 61 (293)
T KOG0317|consen 4 SAHADPPEIVRSTQKDEYYIGYLISSLSGLSRTLAGPRAWIRYRKELVLIAEVLYFGF 61 (293)
T ss_pred ccccCchHHHHHhhhHHHhhhhhhhhhHhHhhhhcchHHHHhhccchhhhhchhhhee
Confidence 3888999999999999999999999888888888889999999999999998875543
No 7
>PF04088 Peroxin-13_N: Peroxin 13, N-terminal region; InterPro: IPR007223 Peroxin-13 is a component of the peroxisomal translocation machinery with Peroxin-14 and Peroxin-17. Both termini of Peroxin-13 are oriented to the cytosol. It is required for peroxisomal association of peroxin-14 []. The proteins also contain an SH3 domain (IPR001452 from INTERPRO).; GO: 0016560 protein import into peroxisome matrix, docking, 0005777 peroxisome, 0016021 integral to membrane
Probab=43.58 E-value=70 Score=28.46 Aligned_cols=79 Identities=13% Similarity=0.220 Sum_probs=39.6
Q ss_pred HHHHHHHHhcchhHHHhhhhHHHHHHHHHHHHHHhcCCCCCcchhhhccEeec-----------CCCCCCCchhHHHHHH
Q 020711 34 ACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGEEYCDITQVV-----------GPQRLPPTPARRALFI 102 (322)
Q Consensus 34 ~l~dvlr~l~G~R~~~~~~~Ei~lls~lLY~~LTTl~G~QTLGEEYcdIvqV~-----------~~~~~~Ps~~RR~l~I 102 (322)
.+.+.+-.++|.-.+.+|-+-+ +.++++.-. .....---+||-+..--. ...+..|++..=++|+
T Consensus 68 ~Lk~~lgs~l~ifal~R~lk~l--~~kl~~~~~--~~~~~~~~~~f~~f~~~~~~~~~~~~~~~~~~~~~~s~~PlllF~ 143 (158)
T PF04088_consen 68 RLKNTLGSILGIFALFRWLKWL--YRKLLGRLR--NSNNSLTEDEFSKFESEQNALASNANGQPSGKRPKPSSKPLLLFL 143 (158)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHhcccc--CCCCCCCHHHHHHHHhccccccccccccccCCCCCCCcccHHHHH
Confidence 3445555666666666666542 333333211 112233445554332210 1123334544445666
Q ss_pred HHHhhhHHHHHHHH
Q 020711 103 VYQTAVPYIAERIS 116 (322)
Q Consensus 103 ll~~l~PYll~r~~ 116 (322)
+..+-+|||+.|+.
T Consensus 144 ~~v~G~PyLi~Kli 157 (158)
T PF04088_consen 144 AAVFGLPYLIWKLI 157 (158)
T ss_pred HHHHHHHHHHHHHh
Confidence 66666799999975
No 8
>PF06271 RDD: RDD family; InterPro: IPR010432 This domain contains three highly conserved amino acids: one arginine and two aspartates, hence the name of RDD domain. This region contains two predicted transmembrane regions. The arginine occurs at the N terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown. However this region may be involved in transport of an as yet unknown set of ligands.
Probab=27.00 E-value=2.3e+02 Score=22.67 Aligned_cols=41 Identities=22% Similarity=0.306 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCcchhhhccEeecCCCCCCCchh
Q 020711 55 TKLVGQMLYYVLTTGSGQQTLGEEYCDITQVVGPQRLPPTPA 96 (322)
Q Consensus 55 i~lls~lLY~~LTTl~G~QTLGEEYcdIvqV~~~~~~~Ps~~ 96 (322)
+-++.-+.|+........||+|.=.|+|--|+ .++..|+..
T Consensus 53 ~~~~~~~~~~~~~~~~~G~T~Gk~~~~lrvv~-~~g~~~~~~ 93 (137)
T PF06271_consen 53 IFLLVFFYYFIVPWARKGQTLGKRLLGLRVVD-KDGNPPSFG 93 (137)
T ss_pred HHHHHHHHHHHHHHhcCCCCcccccCceEEEe-cCCCCCcHH
Confidence 34566777888888888899999999996666 555555554
No 9
>PF13972 TetR: Bacterial transcriptional repressor; PDB: 3RH2_A 3NNR_A.
Probab=23.60 E-value=78 Score=26.64 Aligned_cols=98 Identities=14% Similarity=0.148 Sum_probs=61.4
Q ss_pred CCCcchhhhhhhhhH----HHHHHHHHHHHHHHHHhcchhHHHhhhhHHHHHHHHHHHHHHhcCCCCCcchhhhccEeec
Q 020711 11 PAAQPEIMRAAEKDE----QYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGEEYCDITQVV 86 (322)
Q Consensus 11 ~A~qPeIIRA~QKDe----~y~~~L~~~l~dvlr~l~G~R~~~~~~~Ei~lls~lLY~~LTTl~G~QTLGEEYcdIvqV~ 86 (322)
+.+-|+|++.+.+=. .......+.+.++++.+..+-....=..|+..+++.+-+..|.....+..-++-..
T Consensus 42 ~~dl~~Ll~~~p~L~~~~~~~~~~~~~~~~~l~~~l~~~g~l~~~~~~~~~La~~i~lv~t~Wl~~~~~~~~~~~----- 116 (146)
T PF13972_consen 42 YRDLPDLLRRDPELKKRYRQLQQRRREQLRQLLQSLIEAGILRIDDEELQALADNIWLVSTFWLSFLETQHPRDK----- 116 (146)
T ss_dssp HHSHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSB---GHHHHHHHHHHHHHHHCHHHHHHHHSS--------
T ss_pred HccHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHhHHHHhCcccc-----
Confidence 345566665543211 14445667778888888888778888999999999999999987765443322211
Q ss_pred CCCCCCCchhHHHHHHHHHhhhHHHHHHHHH
Q 020711 87 GPQRLPPTPARRALFIVYQTAVPYIAERISS 117 (322)
Q Consensus 87 ~~~~~~Ps~~RR~l~Ill~~l~PYll~r~~~ 117 (322)
.......+...-++..+.||+-++...
T Consensus 117 ----~~~~~~~~gv~qv~~L~~PyLt~~~~~ 143 (146)
T PF13972_consen 117 ----LTEEDIRRGVYQVLSLLRPYLTPEGRE 143 (146)
T ss_dssp ------HHCHHHHHHHHHHHHHCCB-HHHHH
T ss_pred ----chHHHHHHHHHHHHHHHHHhCCHHHHh
Confidence 122334778888899999999887543
No 10
>PF14780 DUF4477: Domain of unknown function (DUF4477)
Probab=19.71 E-value=1.8e+02 Score=26.23 Aligned_cols=52 Identities=17% Similarity=0.300 Sum_probs=41.5
Q ss_pred CCCCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHhcchhHHHhhhhHHHHHHHHHHH
Q 020711 8 RFPPAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYY 64 (322)
Q Consensus 8 ~fP~A~qPeIIRA~QKDe~y~~~L~~~l~dvlr~l~G~R~~~~~~~Ei~lls~lLY~ 64 (322)
.+|+.-.--++ .-+|+-.+..+...++.+++.+-. ....+.|..++..++|=
T Consensus 7 ~~p~~~~~~~~--~~~~~~~i~~~~~~l~~~~~~l~s---~~~l~~E~avL~rl~Yk 58 (188)
T PF14780_consen 7 PPPPLVSCVTV--SSSDTSFIKAVKKALKSVLNQLSS---LPQLQTEAAVLERLMYK 58 (188)
T ss_pred CCCCcceeeee--ccccchHHHHHHHHHHHHHHHHcC---cchHHHHHHHHHHHHHH
Confidence 34544333333 778999999999999999998877 67789999999999996
Done!