Query 020711
Match_columns 322
No_of_seqs 122 out of 209
Neff 5.6
Searched_HMMs 13730
Date Mon Mar 25 07:04:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020711.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/020711hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3bz6a2 a.4.5.75 (A:97-180) Hy 10.3 42 0.003 24.0 1.0 17 62-78 13-29 (84)
2 d1k04a_ a.24.14.1 (A:) FAT dom 10.1 2.6E+02 0.019 21.4 5.9 68 22-108 39-121 (142)
3 d1znfa_ g.37.1.1 (A:) XFIN, th 9.3 39 0.0028 18.5 0.4 6 315-320 2-7 (26)
4 d1iv8a2 c.1.8.1 (A:1-653) Malt 7.4 2E+02 0.014 27.2 5.0 70 23-99 527-609 (653)
5 d16vpa_ d.180.1.1 (A:) Conserv 7.1 3.4E+02 0.025 23.7 6.0 44 23-66 118-184 (356)
6 d2dmda3 g.37.1.1 (A:62-90) Zin 6.2 62 0.0045 18.3 0.3 7 314-320 4-10 (29)
7 d1jaea1 b.71.1.1 (A:379-471) A 6.1 42 0.003 24.4 -0.7 7 78-84 45-51 (93)
8 d1hx0a1 b.71.1.1 (A:404-496) A 6.0 43 0.0031 24.3 -0.7 7 78-84 45-51 (93)
9 d1g94a1 b.71.1.1 (A:355-448) B 5.9 43 0.0031 24.3 -0.7 10 77-86 45-54 (94)
10 d1jl7a_ a.1.1.2 (A:) Glycera g 5.9 3.3E+02 0.024 19.2 4.7 39 24-62 99-141 (147)
No 1
>d3bz6a2 a.4.5.75 (A:97-180) Hypothetical protein PSPTO2686 {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=10.30 E-value=42 Score=24.00 Aligned_cols=17 Identities=29% Similarity=0.178 Sum_probs=12.3
Q ss_pred HHHHHHhcCCCCCcchh
Q 020711 62 LYYVLTTGSGQQTLGEE 78 (322)
Q Consensus 62 LY~~LTTl~G~QTLGEE 78 (322)
.-+++--++|-||.||=
T Consensus 13 All~~LlLRGpQT~GEL 29 (84)
T d3bz6a2 13 ILTGLLLLRGPQTVSEL 29 (84)
T ss_dssp HHHHHHHHHCSBCHHHH
T ss_pred HHHHHHHhcCCCChHHH
Confidence 33445568999999994
No 2
>d1k04a_ a.24.14.1 (A:) FAT domain of focal adhesion kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.14 E-value=2.6e+02 Score=21.40 Aligned_cols=68 Identities=16% Similarity=0.193 Sum_probs=43.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcchhHHH------hhhhHHHHHHHHHHHHHHhc---------CCCCCcchhhhccEeec
Q 020711 22 EKDEQYASFIYDACRDAFRQLFGTRVAV------AYQSETKLVGQMLYYVLTTG---------SGQQTLGEEYCDITQVV 86 (322)
Q Consensus 22 QKDe~y~~~L~~~l~dvlr~l~G~R~~~------~~~~Ei~lls~lLY~~LTTl---------~G~QTLGEEYcdIvqV~ 86 (322)
+=|+|.. +-..+...+|.++|..--. ...+||++.=++|==-+.-+ -+..||-|||
T Consensus 39 ~~~~Y~~--lVK~VG~~Lr~Ll~svD~~~~~lp~~~~~eIema~klLskDm~eLi~~MklAqq~~~ttl~~ey------- 109 (142)
T d1k04a_ 39 PPEEYVP--MVKEVGLALRTLLATVDETIPLLPASTHREIEMAQKLLNSDLGELINKMKLAQQYVMTSLQQEY------- 109 (142)
T ss_dssp CGGGHHH--HHHHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSHHHH-------
T ss_pred CchHHHH--HHHHHHHHHHHHHHHHHHHhccCcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHH-------
Confidence 3455443 4455666777777776544 77889987766665444433 4567888887
Q ss_pred CCCCCCCchhHHHHHHHHHhhh
Q 020711 87 GPQRLPPTPARRALFIVYQTAV 108 (322)
Q Consensus 87 ~~~~~~Ps~~RR~l~Ill~~l~ 108 (322)
||-.+-..|++.
T Consensus 110 ----------rr~MLsaaH~LA 121 (142)
T d1k04a_ 110 ----------KKQMLTAAHALA 121 (142)
T ss_dssp ----------HHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHHH
Confidence 676666666654
No 3
>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}
Probab=9.31 E-value=39 Score=18.54 Aligned_cols=6 Identities=33% Similarity=0.357 Sum_probs=5.1
Q ss_pred cccccc
Q 020711 315 KCTNLI 320 (322)
Q Consensus 315 ~c~lcl 320 (322)
||-||-
T Consensus 2 kcglce 7 (26)
T d1znfa_ 2 KCGLCE 7 (26)
T ss_dssp BCSSSC
T ss_pred cccchH
Confidence 899994
No 4
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=7.43 E-value=2e+02 Score=27.20 Aligned_cols=70 Identities=10% Similarity=0.172 Sum_probs=45.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhcchhHHHhhhhHHHHHHHHHHHHHHhcCCCCCc-------------chhhhccEeecCCC
Q 020711 23 KDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSGQQTL-------------GEEYCDITQVVGPQ 89 (322)
Q Consensus 23 KDe~y~~~L~~~l~dvlr~l~G~R~~~~~~~Ei~lls~lLY~~LTTl~G~QTL-------------GEEYcdIvqV~~~~ 89 (322)
=|+.|+..+.+-+..++. +..+..... .++..+.-+|.....+ ||| |=|.-|+.-||++.
T Consensus 527 p~~~ye~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~g~~n~l~-q~~l~~~~pgvpd~yqg~e~wd~slvdpdn 599 (653)
T d1iv8a2 527 QNKEYENRVMELVEETFT---NKDFIKSFM---KFESKIRRIGMIKSLS-LVALKIMSAGIPDFYQGTEIWRYLLTDPDN 599 (653)
T ss_dssp CCHHHHHHHHHHHHHHHH---CHHHHHHHH---HHHHHHHHHHHHHHHH-HHHHHHHSSSEEEEETTTTSCCCCCSTTGG
T ss_pred CCHHHHHHHHHHHHHHcc---CHHHHHHHH---HHHHHHHHHHHHHHHH-HHHHHHcCCCCCcccCCcccccccccCCCC
Confidence 378888877777776664 233433222 3344455554443333 332 89999999999999
Q ss_pred CCCCchhHHH
Q 020711 90 RLPPTPARRA 99 (322)
Q Consensus 90 ~~~Ps~~RR~ 99 (322)
++++-...|.
T Consensus 600 rrpvd~~~r~ 609 (653)
T d1iv8a2 600 RVPVDFKKLH 609 (653)
T ss_dssp GCCCCHHHHH
T ss_pred CCCCChHHHH
Confidence 9999986654
No 5
>d16vpa_ d.180.1.1 (A:) Conserved core of transcriptional regulatory protein vp16 {Herpes simplex virus type 1 [TaxId: 10298]}
Probab=7.06 E-value=3.4e+02 Score=23.66 Aligned_cols=44 Identities=25% Similarity=0.494 Sum_probs=30.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhcchh-----------------------HHHhhhhHHHHHHHHHHHHH
Q 020711 23 KDEQYASFIYDACRDAFRQLFGTR-----------------------VAVAYQSETKLVGQMLYYVL 66 (322)
Q Consensus 23 KDe~y~~~L~~~l~dvlr~l~G~R-----------------------~~~~~~~Ei~lls~lLY~~L 66 (322)
|.+.|...|.+-|..+++.+.|.- ...+|-+|+.-++.+||+-|
T Consensus 118 REe~Y~~Ll~~YC~AL~~yLr~sa~~~~r~~~~~~~~~~~~~~~rq~i~~rYYRE~arLArllylHL 184 (356)
T d16vpa_ 118 REESYRTVLANFCSALYRYLRASVRQLHRQAHMRGRDRDLGEMLRATIADRYYRETARLARVLFLHL 184 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467888888888888888762211 13467778888888887765
No 6
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.17 E-value=62 Score=18.29 Aligned_cols=7 Identities=29% Similarity=0.467 Sum_probs=5.0
Q ss_pred ccccccc
Q 020711 314 LKCTNLI 320 (322)
Q Consensus 314 ~~c~lcl 320 (322)
-||-||-
T Consensus 4 fkcqlcs 10 (29)
T d2dmda3 4 FKCQICP 10 (29)
T ss_dssp EECSSSS
T ss_pred ceeeecc
Confidence 4888883
No 7
>d1jaea1 b.71.1.1 (A:379-471) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]}
Probab=6.09 E-value=42 Score=24.38 Aligned_cols=7 Identities=43% Similarity=1.265 Sum_probs=5.4
Q ss_pred hhhccEe
Q 020711 78 EYCDITQ 84 (322)
Q Consensus 78 EYcdIvq 84 (322)
||||++.
T Consensus 45 ~YCDVis 51 (93)
T d1jaea1 45 TYCDVIS 51 (93)
T ss_dssp EEECTTT
T ss_pred ceeEeee
Confidence 7899864
No 8
>d1hx0a1 b.71.1.1 (A:404-496) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=5.98 E-value=43 Score=24.31 Aligned_cols=7 Identities=43% Similarity=1.265 Sum_probs=5.4
Q ss_pred hhhccEe
Q 020711 78 EYCDITQ 84 (322)
Q Consensus 78 EYcdIvq 84 (322)
||||++.
T Consensus 45 ~YCDVis 51 (93)
T d1hx0a1 45 TYCDVIS 51 (93)
T ss_dssp EEECTTT
T ss_pred ceeEeee
Confidence 7888864
No 9
>d1g94a1 b.71.1.1 (A:355-448) Bacterial alpha-Amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]}
Probab=5.94 E-value=43 Score=24.33 Aligned_cols=10 Identities=20% Similarity=0.684 Sum_probs=7.0
Q ss_pred hhhhccEeec
Q 020711 77 EEYCDITQVV 86 (322)
Q Consensus 77 EEYcdIvqV~ 86 (322)
=|||||+.-+
T Consensus 45 G~YCDVisG~ 54 (94)
T d1g94a1 45 GQYCNVLKGE 54 (94)
T ss_dssp EEEECTTTCC
T ss_pred ceeeEEeecc
Confidence 3799988643
No 10
>d1jl7a_ a.1.1.2 (A:) Glycera globin {Marine bloodworm (Glycera dibranchiata) [TaxId: 6350]}
Probab=5.90 E-value=3.3e+02 Score=19.16 Aligned_cols=39 Identities=13% Similarity=0.152 Sum_probs=25.2
Q ss_pred hHHHHHHHHHHHHHHHHHhcchhH----HHhhhhHHHHHHHHH
Q 020711 24 DEQYASFIYDACRDAFRQLFGTRV----AVAYQSETKLVGQML 62 (322)
Q Consensus 24 De~y~~~L~~~l~dvlr~l~G~R~----~~~~~~Ei~lls~lL 62 (322)
+..|-..+.+.+-++++..+|..+ ...|.+-+..+++.+
T Consensus 99 ~~~~f~~~~~~l~~~l~~~lg~~~t~e~~~AW~~~~~~i~~~m 141 (147)
T d1jl7a_ 99 KAEYFEPLGASLLSAMEHRIGGKMNAAAKDAWAAAYGDISGAL 141 (147)
T ss_dssp CGGGHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHccccCCHHHHHHHHHHHHHHHHHH
Confidence 455667778888888888888764 235555555555443
Done!