Query 020712
Match_columns 322
No_of_seqs 177 out of 1516
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 04:33:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020712.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020712hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 2E-100 4E-105 728.5 22.8 284 29-316 21-324 (324)
2 cd00693 secretory_peroxidase H 100.0 9.2E-93 2E-97 673.4 22.9 280 32-315 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 1.5E-67 3.3E-72 485.0 13.1 220 49-280 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 3.2E-65 6.9E-70 480.3 20.5 225 45-313 14-257 (289)
5 cd00691 ascorbate_peroxidase A 100.0 1E-64 2.3E-69 471.4 19.5 219 44-302 11-252 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 1.8E-61 3.8E-66 448.5 19.2 223 36-301 4-248 (250)
7 PLN02879 L-ascorbate peroxidas 100.0 1.9E-60 4.2E-65 441.0 19.5 212 47-301 18-248 (251)
8 cd00692 ligninase Ligninase an 100.0 3.4E-59 7.3E-64 446.6 21.0 231 45-320 16-291 (328)
9 cd00314 plant_peroxidase_like 100.0 1.7E-55 3.7E-60 410.2 17.0 216 48-297 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 1.7E-55 3.6E-60 427.7 16.7 252 47-306 45-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 9.8E-53 2.1E-57 431.4 17.3 251 47-303 55-405 (716)
12 PRK15061 catalase/hydroperoxid 100.0 4.7E-49 1E-53 402.3 17.4 252 47-306 57-414 (726)
13 cd08201 plant_peroxidase_like_ 100.0 9.2E-46 2E-50 343.0 10.5 203 55-297 33-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 3.2E-38 6.9E-43 296.1 16.2 212 51-299 17-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 3.2E-33 6.9E-38 287.6 15.6 213 48-300 429-710 (716)
16 PRK15061 catalase/hydroperoxid 100.0 1.1E-32 2.4E-37 282.3 16.4 211 52-299 443-721 (726)
17 COG0376 KatG Catalase (peroxid 100.0 8.7E-30 1.9E-34 250.8 15.1 245 48-299 71-416 (730)
18 COG0376 KatG Catalase (peroxid 99.3 2E-11 4.3E-16 121.8 10.7 207 52-299 453-725 (730)
19 PF07172 GRP: Glycine rich pro 75.3 2.6 5.6E-05 33.9 2.6 23 1-23 1-23 (95)
20 PF11895 DUF3415: Domain of un 51.1 13 0.00028 29.0 2.2 30 283-316 2-31 (80)
21 KOG4065 Uncharacterized conser 46.2 60 0.0013 27.4 5.6 80 11-101 7-94 (144)
22 PHA03163 hypothetical protein; 32.9 63 0.0014 25.7 3.5 39 4-43 8-46 (92)
23 TIGR00874 talAB transaldolase. 32.6 2.4E+02 0.0052 27.5 8.3 48 128-176 167-218 (317)
24 PTZ00411 transaldolase-like pr 29.2 40 0.00086 33.2 2.3 76 112-187 161-251 (333)
25 PF03058 Sar8_2: Sar8.2 family 27.4 44 0.00095 26.7 1.8 28 1-28 1-29 (93)
26 PF15240 Pro-rich: Proline-ric 26.8 46 0.001 29.9 2.1 13 11-23 4-16 (179)
27 PRK12346 transaldolase A; Prov 23.8 51 0.0011 32.2 2.0 75 112-187 150-240 (316)
28 PF06163 DUF977: Bacterial pro 23.3 1E+02 0.0022 26.2 3.4 32 285-316 71-103 (127)
29 PLN00017 photosystem I reactio 20.4 62 0.0013 25.6 1.5 20 277-296 38-57 (90)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=1.7e-100 Score=728.49 Aligned_cols=284 Identities=38% Similarity=0.647 Sum_probs=268.5
Q ss_pred CCCCCCcCcccccCccHHHHHHHHHHHHHHhCccchhhhHHHHhcccccC----------ChhhhcccCCCCCchhHHHH
Q 020712 29 EDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQ----------TLSEKEMDRSFGMRNFRYIE 98 (322)
Q Consensus 29 ~~~~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~----------~~~E~~~~~N~~L~g~~~Id 98 (322)
+.++|+++||++|||++|+||+++|++++.+||+++|++|||+||||||+ ...||++++|.+|+||++||
T Consensus 21 ~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~~~Ek~a~~N~~l~Gf~~i~ 100 (324)
T PLN03030 21 QGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGSNTEKTALPNLLLRGYDVID 100 (324)
T ss_pred hhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCCcccccCCCCcCcchHHHHH
Confidence 35679999999999999999999999999999999999999999999998 25799999999999999999
Q ss_pred HHHHHHHhhCCCCcchhhHHHHHhHhhhhhcCCCcccccCCCCCCCCCchhhhhcCCCCCCCCHHHHHHHHHHcCCCccc
Q 020712 99 NIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG 178 (322)
Q Consensus 99 ~iK~~le~~Cp~~VScADilalAardaV~~~GGP~~~v~~GR~D~~~s~~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~~d 178 (322)
.||+.||++||++||||||||+||||||+++|||.|+|++||||+++|...++. +||.|+.++++|++.|+++||+.+|
T Consensus 101 ~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl~~~D 179 (324)
T PLN03030 101 DAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGLNTQD 179 (324)
T ss_pred HHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCCCHHH
Confidence 999999999999999999999999999999999999999999999999877665 8999999999999999999999999
Q ss_pred hhhhhcccccccccccccccccCC------CCCCCCCcchhhhhhhcCCCCCCCCCCccccccCCCCCcccChHHHHHhh
Q 020712 179 LVALLGSHSVGRTHCVKLVHRLYP------EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNIL 252 (322)
Q Consensus 179 lVaLsGaHTiG~~~c~~f~~rl~~------~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~v~lD~~tp~~FDn~Yy~~l~ 252 (322)
||+||||||||++||.+|.+|||| .+||+||++|+..|+..||. .++.+.. ++||+.||.+|||+||+||+
T Consensus 180 lVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~-~~~~~~~--~~lD~~Tp~~FDn~Yy~nll 256 (324)
T PLN03030 180 LVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQ-NGDGSRR--IALDTGSSNRFDASFFSNLK 256 (324)
T ss_pred heeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCC-CCCCCcc--ccCCCCCCcccccHHHHHHH
Confidence 999999999999999999999997 36999999999999999996 2222223 58999999999999999999
Q ss_pred cCCccchhhhhcccCcCcHHHHHHHhhcH----HHHHHHHHHHHHHhHhCCCCCCCCCcccccccccc
Q 020712 253 DNKGLMMVDHQLATDKRTRPYVKKMAKSQ----DYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 316 (322)
Q Consensus 253 ~~~glL~SD~~L~~d~~t~~~V~~yA~~~----~~F~~~Fa~Am~Km~~lgv~tg~~GeIR~~C~~~n 316 (322)
.++|+|+|||+|++|++|+++|++||.|+ +.|+++|++||+|||+|+|+||.+|||||+|+++|
T Consensus 257 ~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN 324 (324)
T PLN03030 257 NGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN 324 (324)
T ss_pred hcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence 99999999999999999999999999875 59999999999999999999999999999999998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=9.2e-93 Score=673.40 Aligned_cols=280 Identities=43% Similarity=0.742 Sum_probs=266.3
Q ss_pred CCCcCcccccCccHHHHHHHHHHHHHHhCccchhhhHHHHhcccccC-------------ChhhhcccCCCCCchhHHHH
Q 020712 32 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQ-------------TLSEKEMDRSFGMRNFRYIE 98 (322)
Q Consensus 32 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~-------------~~~E~~~~~N~~L~g~~~Id 98 (322)
||+++||++|||++|+||+++|++.+.++++++|+||||+||||||+ ..+|+++++|.||+||++||
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~~l~g~~~i~ 80 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNLSLRGFDVID 80 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCCCcchhHHHH
Confidence 59999999999999999999999999999999999999999999997 14699999999999999999
Q ss_pred HHHHHHHhhCCCCcchhhHHHHHhHhhhhhcCCCcccccCCCCCCCCCchhhhhcCCCCCCCCHHHHHHHHHHcCCCccc
Q 020712 99 NIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG 178 (322)
Q Consensus 99 ~iK~~le~~Cp~~VScADilalAardaV~~~GGP~~~v~~GR~D~~~s~~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~~d 178 (322)
.||++||+.||++||||||||||||+||+++|||.|+|++||+|+.++.+..+ ++||.|+.+++++++.|+++||+++|
T Consensus 81 ~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~~~~d 159 (298)
T cd00693 81 DIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTVTD 159 (298)
T ss_pred HHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCCCHHH
Confidence 99999999999999999999999999999999999999999999998877655 78999999999999999999999999
Q ss_pred hhhhhcccccccccccccccccCC-----CCCCCCCcchhhhhhhcCCCCCCCCCCccccccCCCCCcccChHHHHHhhc
Q 020712 179 LVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILD 253 (322)
Q Consensus 179 lVaLsGaHTiG~~~c~~f~~rl~~-----~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~v~lD~~tp~~FDn~Yy~~l~~ 253 (322)
||+|+||||||++||.+|.+|+|+ ++||+||+.|+..|+..||. .+.+++. ++||+.||.+|||+||++|+.
T Consensus 160 ~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~-~~~~~~~--~~lD~~Tp~~FDn~Yy~~l~~ 236 (298)
T cd00693 160 LVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPA-GGDDDTL--VPLDPGTPNTFDNSYYKNLLA 236 (298)
T ss_pred heeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCC-CCCCCcc--ccCCCCCCCccccHHHHHHHh
Confidence 999999999999999999999997 48999999999999999997 3333333 599988999999999999999
Q ss_pred CCccchhhhhcccCcCcHHHHHHHhhcHHHHHHHHHHHHHHhHhCCCCCCCCCccccccccc
Q 020712 254 NKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLA 315 (322)
Q Consensus 254 ~~glL~SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~lgv~tg~~GeIR~~C~~~ 315 (322)
++|+|.|||+|+.|++|+++|++||.||+.|+++|+.||+||++|+|+||.+||||++|+++
T Consensus 237 ~~glL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 237 GRGLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred cccCccCCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=1.5e-67 Score=485.02 Aligned_cols=220 Identities=41% Similarity=0.713 Sum_probs=202.0
Q ss_pred HHHHHHHHHHhCccchhhhHHHHhccccc-C--------ChhhhcccCCCCCc-hhHHHHHHHHHHHhhCCCCcchhhHH
Q 020712 49 IREQVKLLYKRHKNTAFSWLRNIFHDCAV-Q--------TLSEKEMDRSFGMR-NFRYIENIKEAVERECPGVVSCADIL 118 (322)
Q Consensus 49 Vr~~v~~~~~~d~~~aa~llRL~FHDcfv-~--------~~~E~~~~~N~~L~-g~~~Id~iK~~le~~Cp~~VScADil 118 (322)
||++|+++++.+++++|+||||+|||||+ + ...|+++++|.||+ |+++|+.||+++|++||++|||||||
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~~~e~~~~~N~gl~~~~~~i~~ik~~~~~~cp~~VS~ADii 80 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLFSAEKDAPPNRGLRDGFDVIDPIKAKLEAACPGVVSCADII 80 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGSTTGGGSGGGTTHHHHHHHHHHHHHHHCHHSTTTS-HHHHH
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceeccccccccccccCcceeeechhhHHhhhcccccCCCCHHHHH
Confidence 89999999999999999999999999999 5 36799999999997 99999999999999999999999999
Q ss_pred HHHhHhhhhhcCCCcccccCCCCCCCCCchhhhhcCCCCCCCCHHHHHHHHHHcCCCccchhhhhccccccccccccccc
Q 020712 119 VLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVH 198 (322)
Q Consensus 119 alAardaV~~~GGP~~~v~~GR~D~~~s~~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGaHTiG~~~c~~f~~ 198 (322)
++|||+||+.+|||.|+|++||+|++++...++ .+||.|+.++++|++.|+++|||++|||||+||||||++||.+|.
T Consensus 81 alAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsGaHTiG~~~c~~f~- 158 (230)
T PF00141_consen 81 ALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAEEMVALSGAHTIGRAHCSSFS- 158 (230)
T ss_dssp HHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HHHHHHHHGGGGSTEESGGCTG-
T ss_pred HHHhhhccccccccccccccccccccccccccc-ccccccccccchhhhhhhccccchhhhcceecccccccceecccc-
Confidence 999999999999999999999999999999777 789999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCcchhhhhhhcCCCCCCCCCCccccccCCCCCcccChHHHHHhhcCCccchhhhhcccCcCcHHHHHHHh
Q 020712 199 RLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMA 278 (322)
Q Consensus 199 rl~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~v~lD~~tp~~FDn~Yy~~l~~~~glL~SD~~L~~d~~t~~~V~~yA 278 (322)
|+|..+||+||+.|+.. .|+. ++++ . +++| ||.+|||+||++|++++|+|.||++|+.|++|+++|++||
T Consensus 159 rl~~~~dp~~d~~~~~~---~C~~--~~~~-~--~~~d--tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~~t~~~V~~yA 228 (230)
T PF00141_consen 159 RLYFPPDPTMDPGYAGQ---NCNS--GGDN-G--VPLD--TPTVFDNSYYKNLLNGRGLLPSDQALLNDPETRPIVERYA 228 (230)
T ss_dssp GTSCSSGTTSTHHHHHH---SSST--SGCT-C--EESS--STTS-SSHHHHHHHHTEEEEHHHHHHHHSTTHHHHHHHHH
T ss_pred cccccccccccccccee---ccCC--Cccc-c--cccc--CCCcchhHHHHHHhcCCCcCHHHHHHhcCHHHHHHHHHHh
Confidence 99988999999999988 8933 2222 3 4899 9999999999999999999999999999999999999999
Q ss_pred hc
Q 020712 279 KS 280 (322)
Q Consensus 279 ~~ 280 (322)
+|
T Consensus 229 ~d 230 (230)
T PF00141_consen 229 QD 230 (230)
T ss_dssp HT
T ss_pred cC
Confidence 76
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=3.2e-65 Score=480.29 Aligned_cols=225 Identities=29% Similarity=0.424 Sum_probs=201.4
Q ss_pred HHHHHHHHHHHHHHhCccchhhhHHHHhcccccC--------------ChhhhcccCCCCC-chhHHHHHHHHHHHhhCC
Q 020712 45 AEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQ--------------TLSEKEMDRSFGM-RNFRYIENIKEAVERECP 109 (322)
Q Consensus 45 ~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~--------------~~~E~~~~~N~~L-~g~~~Id~iK~~le~~Cp 109 (322)
++ .+++++ ..+.++|.++|.+|||+|||||++ ...|+++++|.|| +||++|+.||+++ |
T Consensus 14 ~~-~~~~~~-~~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~~E~~~~~N~gL~~g~~vid~iK~~~----~ 87 (289)
T PLN02608 14 IE-KARRDL-RALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNEEEYSHGANNGLKIAIDLCEPVKAKH----P 87 (289)
T ss_pred HH-HHHHHH-HHHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecccccCCccccchHHHHHHHHHHHHHc----C
Confidence 44 556677 447789999999999999999955 2479999999999 6999999999997 4
Q ss_pred CCcchhhHHHHHhHhhhhhcCCCcccccCCCCCCCCCchhhhhcCCCCCCCCHHHHHHHHHHcCCCccchhhhhcccccc
Q 020712 110 GVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVG 189 (322)
Q Consensus 110 ~~VScADilalAardaV~~~GGP~~~v~~GR~D~~~s~~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGaHTiG 189 (322)
+|||||||+||||+||+.+|||.|+|++||+|++++. ++++||+|+.+++++++.|+++||+++|||+|+||||||
T Consensus 88 -~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~---~~~~LP~p~~~~~~l~~~F~~~Gl~~~D~VaLsGAHTiG 163 (289)
T PLN02608 88 -KITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACP---EEGRLPDAKKGAKHLRDVFYRMGLSDKDIVALSGGHTLG 163 (289)
T ss_pred -CcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCC---ccCCCcCCCCCHHHHHHHHHHcCCCHHHHhhhccccccc
Confidence 8999999999999999999999999999999999985 456899999999999999999999999999999999999
Q ss_pred cccccccccccCCCCCCCCCcchhhhhhhcCCCCCCCCCCccccccCCCCCcccChHHHHHhhcC--Ccc--chhhhhcc
Q 020712 190 RTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDN--KGL--MMVDHQLA 265 (322)
Q Consensus 190 ~~~c~~f~~rl~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~v~lD~~tp~~FDn~Yy~~l~~~--~gl--L~SD~~L~ 265 (322)
++||. |+ + + .+ +++ .||.+|||+||++|+.+ +|+ |+|||+|+
T Consensus 164 ~ahc~----r~-g-----~-----------------~g------~~~-~Tp~~FDN~Yy~~ll~~~~~gll~L~SD~~L~ 209 (289)
T PLN02608 164 RAHPE----RS-G-----F-----------------DG------PWT-KEPLKFDNSYFVELLKGESEGLLKLPTDKALL 209 (289)
T ss_pred ccccc----CC-C-----C-----------------CC------CCC-CCCCccChHHHHHHHcCCcCCccccccCHhhh
Confidence 99994 42 0 0 01 112 39999999999999998 788 79999999
Q ss_pred cCcCcHHHHHHHhhcHHHHHHHHHHHHHHhHhCCCCCCCCCccccccc
Q 020712 266 TDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCN 313 (322)
Q Consensus 266 ~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~lgv~tg~~GeIR~~C~ 313 (322)
.|++|+++|+.||.|++.|+++|+.||+||++|+|+||++||+.+.-+
T Consensus 210 ~d~~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~~ 257 (289)
T PLN02608 210 EDPEFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKSTS 257 (289)
T ss_pred cChhHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccCc
Confidence 999999999999999999999999999999999999999999998654
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=1e-64 Score=471.44 Aligned_cols=219 Identities=29% Similarity=0.443 Sum_probs=200.6
Q ss_pred cHHHHHHHHHHHHHHhCccchhhhHHHHhcccccC--------------ChhhhcccCCCCC-chhHHHHHHHHHHHhhC
Q 020712 44 QAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQ--------------TLSEKEMDRSFGM-RNFRYIENIKEAVEREC 108 (322)
Q Consensus 44 ~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~--------------~~~E~~~~~N~~L-~g~~~Id~iK~~le~~C 108 (322)
..++||+++|++.+. +++++|+||||+|||||++ +.+|+++++|.+| +||++|+.||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~~~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~---- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSGTYDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKY---- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHhccccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHc----
Confidence 456799999999999 9999999999999999875 1359999999999 8999999999987
Q ss_pred CCCcchhhHHHHHhHhhhhhcCCCcccccCCCCCCCCCchhhhhcCCCCCCCCHHHHHHHHHHcCCCccchhhhhccccc
Q 020712 109 PGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSV 188 (322)
Q Consensus 109 p~~VScADilalAardaV~~~GGP~~~v~~GR~D~~~s~~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGaHTi 188 (322)
| +||||||||+|||+||+.+|||.|+|++||+|+.++....++.+||.|+.+++++++.|+++||+.+|||+|+|||||
T Consensus 86 ~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d~VaLsGaHTi 164 (253)
T cd00691 86 P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQEIVALSGAHTL 164 (253)
T ss_pred C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHHHHHHhccccee
Confidence 5 899999999999999999999999999999999999877778889999999999999999999999999999999999
Q ss_pred ccccccccccccCCCCCCCCCcchhhhhhhcCCCCCCCCCCccccccCCCCCcccChHHHHHhhcCCc--------cchh
Q 020712 189 GRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKG--------LMMV 260 (322)
Q Consensus 189 G~~~c~~f~~rl~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~v~lD~~tp~~FDn~Yy~~l~~~~g--------lL~S 260 (322)
|++||..+ + . . +++ ..||.+|||+||++|+.++| +|+|
T Consensus 165 G~a~c~~~-----~-----~---------------~--g~~-------~~tp~~FDn~Yy~~ll~~~g~~~~~~~~~L~s 210 (253)
T cd00691 165 GRCHKERS-----G-----Y---------------D--GPW-------TKNPLKFDNSYFKELLEEDWKLPTPGLLMLPT 210 (253)
T ss_pred ecccccCC-----C-----C---------------C--CCC-------CCCCCcccHHHHHHHhcCCCccCcCcceechh
Confidence 99999531 1 0 0 111 13999999999999999999 9999
Q ss_pred hhhcccCcCcHHHHHHHhhcHHHHHHHHHHHHHHhHhCCCCC
Q 020712 261 DHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLT 302 (322)
Q Consensus 261 D~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~lgv~t 302 (322)
|++|+.|++|+.+|+.||.|++.|+++|++||+||++|||..
T Consensus 211 D~~L~~d~~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~~ 252 (253)
T cd00691 211 DKALLEDPKFRPYVELYAKDQDAFFKDYAEAHKKLSELGVPF 252 (253)
T ss_pred hHHHHcCccHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999999999999963
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=1.8e-61 Score=448.48 Aligned_cols=223 Identities=30% Similarity=0.490 Sum_probs=198.7
Q ss_pred Cccccc--CccHHHHHHHHHHHHHHhCccchhhhHHHHhc-----ccccC---------ChhhhcccCCCCC-chhHHHH
Q 020712 36 NFYKDT--CPQAEDIIREQVKLLYKRHKNTAFSWLRNIFH-----DCAVQ---------TLSEKEMDRSFGM-RNFRYIE 98 (322)
Q Consensus 36 ~fY~~s--CP~~e~iVr~~v~~~~~~d~~~aa~llRL~FH-----Dcfv~---------~~~E~~~~~N~~L-~g~~~Id 98 (322)
+||... |+.+++.+++.+++.+ .+++++|.||||+|| ||++. +.+|+++++|.|| +||++|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~~~E~~~~~N~gl~~~~~~i~ 82 (250)
T PLN02364 4 NYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRFDAEQAHGANSGIHIALRLLD 82 (250)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCccccccccccCCCccCHHHHHHHHH
Confidence 566644 8899999999999988 789999999999999 56554 3569999999999 8999999
Q ss_pred HHHHHHHhhCCCCcchhhHHHHHhHhhhhhcCCCcccccCCCCCCCCCchhhhhcCCCCCCCCHHHHHHHHHH-cCCCcc
Q 020712 99 NIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAA-IGIDAP 177 (322)
Q Consensus 99 ~iK~~le~~Cp~~VScADilalAardaV~~~GGP~~~v~~GR~D~~~s~~~~~~~~LP~p~~~~~~l~~~F~~-~Gl~~~ 177 (322)
.||+++ ++|||||||+||||+||+++|||.|+|++||+|++++.. +++||.|+.++++|++.|++ +|||++
T Consensus 83 ~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F~~~~Gl~~~ 154 (250)
T PLN02364 83 PIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPP---EGRLPDATKGCDHLRDVFAKQMGLSDK 154 (250)
T ss_pred HHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccc---cCCCCCCCcCHHHHHHHHHHhcCCCHH
Confidence 999998 489999999999999999999999999999999999864 56799999999999999997 599999
Q ss_pred chhhhhcccccccccccccccccCCCCCCCCCcchhhhhhhcCCCCCCCCCCccccccCCCCCcccChHHHHHhhcC--C
Q 020712 178 GLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDN--K 255 (322)
Q Consensus 178 dlVaLsGaHTiG~~~c~~f~~rl~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~v~lD~~tp~~FDn~Yy~~l~~~--~ 255 (322)
|||+|+||||||++||. |+ + + .+ +++ .||.+|||+||++|+.+ +
T Consensus 155 d~VaLsGaHTiG~~hc~----r~-~-----~-----------------~g------~~~-~tp~~fDn~Yy~~ll~~~~~ 200 (250)
T PLN02364 155 DIVALSGAHTLGRCHKD----RS-G-----F-----------------EG------AWT-SNPLIFDNSYFKELLSGEKE 200 (250)
T ss_pred HheeeecceeeccccCC----CC-C-----C-----------------CC------CCC-CCCCccchHHHHHHhcCCcC
Confidence 99999999999999992 32 0 0 01 112 38999999999999998 8
Q ss_pred ccch--hhhhcccCcCcHHHHHHHhhcHHHHHHHHHHHHHHhHhCCCC
Q 020712 256 GLMM--VDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPL 301 (322)
Q Consensus 256 glL~--SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~lgv~ 301 (322)
|+|. |||+|+.|++|+.+|+.||.|++.|+++|+.||+||++||+.
T Consensus 201 gll~l~sD~~L~~d~~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 201 GLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred CCccccchHHHccCchHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 9875 999999999999999999999999999999999999999974
No 7
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=1.9e-60 Score=440.99 Aligned_cols=212 Identities=30% Similarity=0.456 Sum_probs=190.0
Q ss_pred HHHHHHHHHHHHhCccchhhhHHHHhcccccC--------------ChhhhcccCCCCCc-hhHHHHHHHHHHHhhCCCC
Q 020712 47 DIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQ--------------TLSEKEMDRSFGMR-NFRYIENIKEAVERECPGV 111 (322)
Q Consensus 47 ~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~--------------~~~E~~~~~N~~L~-g~~~Id~iK~~le~~Cp~~ 111 (322)
+-+++.+.+.+ .+...+|.+|||+||||.++ +..|+++++|.||+ ++++|+.||+++ ++
T Consensus 18 ~~~~~~~~~~~-~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~~E~~~~~N~gL~~~~~~i~~iK~~~-----~~ 91 (251)
T PLN02879 18 QRCKRKLRGLI-AEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHPQELAHDANNGLDIAVRLLDPIKELF-----PI 91 (251)
T ss_pred HHHHHHHHHHH-hCCCchhHhHHHHHhhhccccCCCCCCCCCeeecChhhccCCCcCChHHHHHHHHHHHHHc-----CC
Confidence 34566777766 45799999999999999998 24699999999997 999999999998 48
Q ss_pred cchhhHHHHHhHhhhhhcCCCcccccCCCCCCCCCchhhhhcCCCCCCCCHHHHHHHHHHcCCCccchhhhhcccccccc
Q 020712 112 VSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRT 191 (322)
Q Consensus 112 VScADilalAardaV~~~GGP~~~v~~GR~D~~~s~~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGaHTiG~~ 191 (322)
|||||||+||||+||+.+|||.|+|++||+|+.++. ++++||.|+.++++|++.|+++||+++||||||||||||++
T Consensus 92 VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~---~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVALsGaHTiG~a 168 (251)
T PLN02879 92 LSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPP---PEGRLPQATKGVDHLRDVFGRMGLNDKDIVALSGGHTLGRC 168 (251)
T ss_pred cCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCC---cccCCCCCCCCHHHHHHHHHHcCCCHHHHeeeecccccccc
Confidence 999999999999999999999999999999999875 45789999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCcchhhhhhhcCCCCCCCCCCccccccCCCCCcccChHHHHHhhcC--Ccc--chhhhhcccC
Q 020712 192 HCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDN--KGL--MMVDHQLATD 267 (322)
Q Consensus 192 ~c~~f~~rl~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~v~lD~~tp~~FDn~Yy~~l~~~--~gl--L~SD~~L~~d 267 (322)
||. |. + .++ .+| .||.+|||+||++|+.+ +|+ |+||++|+.|
T Consensus 169 h~~----r~-g----------------------~~g------~~d-~tp~~FDN~Yy~~ll~~~~~gll~L~SD~aL~~D 214 (251)
T PLN02879 169 HKE----RS-G----------------------FEG------AWT-PNPLIFDNSYFKEILSGEKEGLLQLPTDKALLDD 214 (251)
T ss_pred ccc----cc-c----------------------CCC------CCC-CCccceeHHHHHHHHcCCcCCCccchhhHHHhcC
Confidence 995 31 1 011 234 39999999999999998 888 6799999999
Q ss_pred cCcHHHHHHHhhcHHHHHHHHHHHHHHhHhCCCC
Q 020712 268 KRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPL 301 (322)
Q Consensus 268 ~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~lgv~ 301 (322)
++|+++|++||.||+.|+++|+.||+||++||+.
T Consensus 215 ~~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 215 PLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred CcHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999999999985
No 8
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=3.4e-59 Score=446.63 Aligned_cols=231 Identities=25% Similarity=0.307 Sum_probs=205.6
Q ss_pred HHHHHHHHHHHHHHhCc---cchhhhHHHHhcccccC---------------------ChhhhcccCCCCCchhHHHHHH
Q 020712 45 AEDIIREQVKLLYKRHK---NTAFSWLRNIFHDCAVQ---------------------TLSEKEMDRSFGMRNFRYIENI 100 (322)
Q Consensus 45 ~e~iVr~~v~~~~~~d~---~~aa~llRL~FHDcfv~---------------------~~~E~~~~~N~~L~g~~~Id~i 100 (322)
+|..|++++++.+..+. ..|+.+|||+||||+++ ...|+++++|.||+ ++|+.+
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~~E~~~~~N~gL~--~vvd~l 93 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDDIETAFHANIGLD--EIVEAL 93 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCcccccCCCCCCHH--HHHHHH
Confidence 57899999999998554 46777999999999972 13599999999998 999999
Q ss_pred HHHHHhhCCCCcchhhHHHHHhHhhhhh-cCCCcccccCCCCCCCCCchhhhhcCCCCCCCCHHHHHHHHHHcCCCccch
Q 020712 101 KEAVERECPGVVSCADILVLSGRDGVVA-LGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGL 179 (322)
Q Consensus 101 K~~le~~Cp~~VScADilalAardaV~~-~GGP~~~v~~GR~D~~~s~~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~~dl 179 (322)
|..+|+.| |||||||+||||+||+. .|||.|+|++||+|++++. ++++||.|+.++++|++.|+++||+.+||
T Consensus 94 k~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~---~~g~LP~p~~sv~~l~~~F~~~Gf~~~E~ 167 (328)
T cd00692 94 RPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPA---PDGLVPEPFDSVDKILARFADAGFSPDEL 167 (328)
T ss_pred HHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCC---cccCCCCCCCCHHHHHHHHHHcCCCHHHH
Confidence 99999999 99999999999999995 6999999999999999986 45689999999999999999999999999
Q ss_pred hhhhcccccccccccccccccCCCCCCCCCcchhhhhhhcCCCCCCCCCCccccccCCCCCcccChHHHHHhh-cCCc--
Q 020712 180 VALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNIL-DNKG-- 256 (322)
Q Consensus 180 VaLsGaHTiG~~~c~~f~~rl~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~v~lD~~tp~~FDn~Yy~~l~-~~~g-- 256 (322)
|+|+||||||++|. +||+++. +++|. ||.+|||+||+|++ .+++
T Consensus 168 VaLsGAHTiG~a~~----------~Dps~~g----------------------~p~D~-TP~~FDn~Yf~~ll~~~~~~~ 214 (328)
T cd00692 168 VALLAAHSVAAQDF----------VDPSIAG----------------------TPFDS-TPGVFDTQFFIETLLKGTAFP 214 (328)
T ss_pred hhhcccccccccCC----------CCCCCCC----------------------CCCCC-CcchhcHHHHHHHHHcCCCCC
Confidence 99999999999982 3666631 27785 99999999999987 5555
Q ss_pred -----------------cchhhhhcccCcCcHHHHHHHhhcHHHHHHHHHHHHHHhHhCCCCCCCCCccccccccccCCC
Q 020712 257 -----------------LMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANKLH 319 (322)
Q Consensus 257 -----------------lL~SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~lgv~tg~~GeIR~~C~~~n~~~ 319 (322)
+|.||++|+.|++|+.+|++||.||++|+++|+.||+||++|||. +..+.+|+.|++.+
T Consensus 215 g~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~----~~~l~dcs~v~p~~ 290 (328)
T cd00692 215 GSGGNQGEVESPLPGEFRLQSDFLLARDPRTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQD----NISLTDCSDVIPPP 290 (328)
T ss_pred CccccccccccCccccccccchHHHhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCC----cchhccCcccCCCC
Confidence 499999999999999999999999999999999999999999986 44888999999765
Q ss_pred C
Q 020712 320 D 320 (322)
Q Consensus 320 ~ 320 (322)
.
T Consensus 291 ~ 291 (328)
T cd00692 291 K 291 (328)
T ss_pred C
Confidence 4
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=1.7e-55 Score=410.22 Aligned_cols=216 Identities=31% Similarity=0.475 Sum_probs=197.3
Q ss_pred HHHHHHHHHHHhCccchhhhHHHHhcccccC---------------ChhhhcccCCCCC-chhHHHHHHHHHHHhhCCCC
Q 020712 48 IIREQVKLLYKRHKNTAFSWLRNIFHDCAVQ---------------TLSEKEMDRSFGM-RNFRYIENIKEAVERECPGV 111 (322)
Q Consensus 48 iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~---------------~~~E~~~~~N~~L-~g~~~Id~iK~~le~~Cp~~ 111 (322)
.|++.|++.+.+++.+++++|||+||||+++ ..+|+++++|.+| +++++|+.||.++|. |++
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~~e~~~~~N~~l~~~~~~l~~ik~~~~~--~~~ 79 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFEPELDRPENGGLDKALRALEPIKSAYDG--GNP 79 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEeccccccCcccccHHHHHHHHHHHHHHcCC--CCc
Confidence 5888999999999999999999999999996 2459999999997 999999999999988 899
Q ss_pred cchhhHHHHHhHhhhhhc--CCCcccccCCCCCCCCCc--hhhhhcCCCCCCCCHHHHHHHHHHcCCCccchhhhh-ccc
Q 020712 112 VSCADILVLSGRDGVVAL--GGPYIPLKTGRRDGRKSR--AEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALL-GSH 186 (322)
Q Consensus 112 VScADilalAardaV~~~--GGP~~~v~~GR~D~~~s~--~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-GaH 186 (322)
|||||||++|+++||+.+ |||.|+|++||+|+..+. ...+..++|.|..+++++++.|+++||+++|||||+ |||
T Consensus 80 vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~e~VAL~~GaH 159 (255)
T cd00314 80 VSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPSELVALSAGAH 159 (255)
T ss_pred ccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHHHHHhhccCCe
Confidence 999999999999999999 999999999999999774 334566788888899999999999999999999999 999
Q ss_pred cc-ccccccccccccCCCCCCCCCcchhhhhhhcCCCCCCCCCCccccccCCCCCcccChHHHHHhhcCC----------
Q 020712 187 SV-GRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNK---------- 255 (322)
Q Consensus 187 Ti-G~~~c~~f~~rl~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~v~lD~~tp~~FDn~Yy~~l~~~~---------- 255 (322)
|| |++||..|..|+ | .+|+.||.+|||+||++|+.++
T Consensus 160 ti~G~~~~~~~~~~~-------------------~-------------~~~~~tp~~fDN~yy~~l~~~~~~~~~~~~~~ 207 (255)
T cd00314 160 TLGGKNHGDLLNYEG-------------------S-------------GLWTSTPFTFDNAYFKNLLDMNWEWRVGSPDP 207 (255)
T ss_pred eccCcccCCCCCccc-------------------C-------------CCCCCCCCccchHHHHHHhcCCcccccCCccC
Confidence 99 999998776552 2 2244599999999999999988
Q ss_pred ------ccchhhhhcccCcCcHHHHHHHhhcHHHHHHHHHHHHHHhHh
Q 020712 256 ------GLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSE 297 (322)
Q Consensus 256 ------glL~SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~ 297 (322)
++|.||++|+.|++|+.+|+.||.|++.|+++|++||+||++
T Consensus 208 ~~~~~~~~l~sD~~L~~d~~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 208 DGVKGPGLLPSDYALLSDSETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred CCcccCCCchhhHHHhcCHhHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999999999999999999974
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=1.7e-55 Score=427.70 Aligned_cols=252 Identities=20% Similarity=0.277 Sum_probs=222.4
Q ss_pred HHHHHHHHHHHHhC--------ccchhhhHHHHhcccccC---------------ChhhhcccCCCCC-chhHHHHHHHH
Q 020712 47 DIIREQVKLLYKRH--------KNTAFSWLRNIFHDCAVQ---------------TLSEKEMDRSFGM-RNFRYIENIKE 102 (322)
Q Consensus 47 ~iVr~~v~~~~~~d--------~~~aa~llRL~FHDcfv~---------------~~~E~~~~~N~~L-~g~~~Id~iK~ 102 (322)
+.|++.|++.+... ...+|.+|||+|||+.++ +..|++++.|.|| ++..+++.||+
T Consensus 45 ~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~pe~~~~~N~gL~~a~~~L~pik~ 124 (409)
T cd00649 45 EALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFAPLNSWPDNVNLDKARRLLWPIKQ 124 (409)
T ss_pred HHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccccccCcHhhhhHHHHHHHHHHHHH
Confidence 68899999988754 479999999999999998 3568999999999 68999999999
Q ss_pred HHHhhCCCCcchhhHHHHHhHhhhhhcCCCcccccCCCCCCCCCchh---------------------------------
Q 020712 103 AVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAE--------------------------------- 149 (322)
Q Consensus 103 ~le~~Cp~~VScADilalAardaV~~~GGP~~~v~~GR~D~~~s~~~--------------------------------- 149 (322)
++ |..||+||+|+||+..||+.+|||.|++..||.|...+...
T Consensus 125 k~----~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~pl~a~~mgli 200 (409)
T cd00649 125 KY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENPLAAVQMGLI 200 (409)
T ss_pred Hc----CCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccccchhhccchhhhhcccc
Confidence 98 65799999999999999999999999999999999764320
Q ss_pred --hhhc--CCCCCCCCHHHHHHHHHHcCCCccchhhh-hcccccccccccccccccCCCCCCCCCcchhhhhh--hcCCC
Q 020712 150 --ILEQ--YLPDHNDSMSVVLERFAAIGIDAPGLVAL-LGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHML--HKCPD 222 (322)
Q Consensus 150 --~~~~--~LP~p~~~~~~l~~~F~~~Gl~~~dlVaL-sGaHTiG~~~c~~f~~rl~~~~dp~~~~~~~~~L~--~~Cp~ 222 (322)
.+++ .||+|..++.+|++.|++||||++||||| +||||||++||.+|.+|+ ++||.+++.|++.|. ..||.
T Consensus 201 yv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rl--g~dP~~~~~~~~gLgw~~~Cp~ 278 (409)
T cd00649 201 YVNPEGPDGNPDPLAAAKDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASHV--GPEPEAAPIEQQGLGWKNSYGT 278 (409)
T ss_pred ccCCCCCCCCCCCccCHHHHHHHHHHcCCCHHHHeeeccCCcceeecCcccccccC--CCCCCcCHHHHHhhcccccCCC
Confidence 1223 69999999999999999999999999999 599999999999999998 479999999999995 89997
Q ss_pred CCCCCCCccccccC---CCCCcccChHHHHHhhc------------------------------------CCccchhhhh
Q 020712 223 AIPDPKAVQYVRND---RGTPMVLDNNYYRNILD------------------------------------NKGLMMVDHQ 263 (322)
Q Consensus 223 ~~~~~~~~~~v~lD---~~tp~~FDn~Yy~~l~~------------------------------------~~glL~SD~~ 263 (322)
..+.+..+ +.+| +.||.+|||+||++|+. ++|+|+||++
T Consensus 279 g~g~~t~~--sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d~~~~~~~~~~gmL~SD~a 356 (409)
T cd00649 279 GKGKDTIT--SGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPDAHDPSKKHAPMMLTTDLA 356 (409)
T ss_pred CCCCCCcc--ccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCCCccccccccCcccchhhHh
Confidence 33333333 3688 46999999999999998 5689999999
Q ss_pred cccCcCcHHHHHHHhhcHHHHHHHHHHHHHHh--HhCCCCCCCCC
Q 020712 264 LATDKRTRPYVKKMAKSQDYFFKEFSRAITLL--SENNPLTGTKG 306 (322)
Q Consensus 264 L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km--~~lgv~tg~~G 306 (322)
|+.|++|+++|++||.|++.||++|++||+|| +.+||++-.-|
T Consensus 357 L~~Dp~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 357 LRFDPEYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred hhcCccHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhhhcC
Confidence 99999999999999999999999999999999 69999886555
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=9.8e-53 Score=431.40 Aligned_cols=251 Identities=19% Similarity=0.252 Sum_probs=217.2
Q ss_pred HHHHHHHHHHHHhC--------ccchhhhHHHHhcccccC---------------ChhhhcccCCCCC-chhHHHHHHHH
Q 020712 47 DIIREQVKLLYKRH--------KNTAFSWLRNIFHDCAVQ---------------TLSEKEMDRSFGM-RNFRYIENIKE 102 (322)
Q Consensus 47 ~iVr~~v~~~~~~d--------~~~aa~llRL~FHDcfv~---------------~~~E~~~~~N~~L-~g~~~Id~iK~ 102 (322)
+.|++++++.+... ...+|-+|||+||++.+| +.+|++++.|.+| +++.+++.||+
T Consensus 55 ~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~P~~sw~~N~~Ldka~~lL~pIk~ 134 (716)
T TIGR00198 55 AAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFAPLNSWPDNVNLDKARRLLWPIKK 134 (716)
T ss_pred HHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecccccCchhhhhHHHHHHHHHHHHH
Confidence 46899999988764 379999999999999998 3568999999999 68899999988
Q ss_pred HHHhhCCCCcchhhHHHHHhHhhhhhcCCCcccccCCCCCCCCCch--------------------------h-------
Q 020712 103 AVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRA--------------------------E------- 149 (322)
Q Consensus 103 ~le~~Cp~~VScADilalAardaV~~~GGP~~~v~~GR~D~~~s~~--------------------------~------- 149 (322)
+ ||++|||||||+||+++||+.+|||.|+|.+||+|+..+.. .
T Consensus 135 k----yp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~a~~~~Gliy 210 (716)
T TIGR00198 135 K----YGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSREDRESLENPLAATEMGLIY 210 (716)
T ss_pred H----CCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccccccccccccchhhhccccc
Confidence 5 69999999999999999999999999999999999943310 0
Q ss_pred ---hhhcCCCCCCCCHHHHHHHHHHcCCCccchhhhh-cccccccccccccccccCCCCCCCCCcchhhhhhhcCCCCCC
Q 020712 150 ---ILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALL-GSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIP 225 (322)
Q Consensus 150 ---~~~~~LP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-GaHTiG~~~c~~f~~rl~~~~dp~~~~~~~~~L~~~Cp~~~~ 225 (322)
+....+|.|..++.+|++.|.+||||++|||||+ ||||||++||.+|.+|+ ++||++++.|++.|+..||...+
T Consensus 211 vnpeg~~~lPdP~~sa~~Lrd~F~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rl--g~dP~~~~~~~~gLg~~c~~~~g 288 (716)
T TIGR00198 211 VNPEGPDGHPDPLCTAQDIRTTFARMGMNDEETVALIAGGHTVGKCHGAGPAELI--GPDPEGAPIEEQGLGWHNQYGKG 288 (716)
T ss_pred cCcccccCCCCCCCCHHHHHHHHHHcCCChHHHeeeecCceeccccCCCcccccC--CCCCCcCHHHHHHhcccCCCCCC
Confidence 1112699999999999999999999999999995 99999999999999998 58999999999999999996332
Q ss_pred CCCCccccccC---CCCCcccChHHHHHhhcC----------------------------------CccchhhhhcccCc
Q 020712 226 DPKAVQYVRND---RGTPMVLDNNYYRNILDN----------------------------------KGLMMVDHQLATDK 268 (322)
Q Consensus 226 ~~~~~~~v~lD---~~tp~~FDn~Yy~~l~~~----------------------------------~glL~SD~~L~~d~ 268 (322)
.+..+..+.+| +.||.+|||+||+||+.+ +++|+||++|..|+
T Consensus 289 ~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~~~~~~~~~~mL~SDlaL~~Dp 368 (716)
T TIGR00198 289 VGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVEDPNKKHNPIMLDADLALRFDP 368 (716)
T ss_pred CCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccccccccccccccccccCccchhHHhccCc
Confidence 11111113777 469999999999999975 68999999999999
Q ss_pred CcHHHHHHHhhcHHHHHHHHHHHHHHhH--hCCCCCC
Q 020712 269 RTRPYVKKMAKSQDYFFKEFSRAITLLS--ENNPLTG 303 (322)
Q Consensus 269 ~t~~~V~~yA~~~~~F~~~Fa~Am~Km~--~lgv~tg 303 (322)
+++++|+.||.|++.|+++|++||+||+ .+|++.-
T Consensus 369 ~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~~ 405 (716)
T TIGR00198 369 EFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKSR 405 (716)
T ss_pred cHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchhh
Confidence 9999999999999999999999999998 5666543
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=4.7e-49 Score=402.30 Aligned_cols=252 Identities=19% Similarity=0.275 Sum_probs=218.4
Q ss_pred HHHHHHHHHHHHhC--------ccchhhhHHHHhcccccC---------------ChhhhcccCCCCC-chhHHHHHHHH
Q 020712 47 DIIREQVKLLYKRH--------KNTAFSWLRNIFHDCAVQ---------------TLSEKEMDRSFGM-RNFRYIENIKE 102 (322)
Q Consensus 47 ~iVr~~v~~~~~~d--------~~~aa~llRL~FHDcfv~---------------~~~E~~~~~N~~L-~g~~~Id~iK~ 102 (322)
+.|+++|++.+... ...+|-+|||+||++.+| +.+|++++.|.+| ++..+++.||+
T Consensus 57 ~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~pe~~w~~N~gL~ka~~~L~pik~ 136 (726)
T PRK15061 57 EALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFAPLNSWPDNVNLDKARRLLWPIKQ 136 (726)
T ss_pred HHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCcccccchhhhhHHHHHHHHHHHHH
Confidence 46889999988754 479999999999999998 3578999999999 78999999999
Q ss_pred HHHhhCCCCcchhhHHHHHhHhhhhhcCCCcccccCCCCCCCCCchh---------------------------------
Q 020712 103 AVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAE--------------------------------- 149 (322)
Q Consensus 103 ~le~~Cp~~VScADilalAardaV~~~GGP~~~v~~GR~D~~~s~~~--------------------------------- 149 (322)
++ |..||+||+|+||+..|||.+|||.|++..||.|...+...
T Consensus 137 ky----~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~pl~a~~mgl 212 (726)
T PRK15061 137 KY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGDERYSGERDLENPLAAVQMGL 212 (726)
T ss_pred Hh----CCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccccccccccccccccccchhhhhccc
Confidence 98 66799999999999999999999999999999998654320
Q ss_pred -----hhhcCCCCCCCCHHHHHHHHHHcCCCccchhhhh-cccccccccccccccccCCCCCCCCCcchhhhhh--hcCC
Q 020712 150 -----ILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALL-GSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHML--HKCP 221 (322)
Q Consensus 150 -----~~~~~LP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-GaHTiG~~~c~~f~~rl~~~~dp~~~~~~~~~L~--~~Cp 221 (322)
+....+|+|..++.+|++.|.+||||++|||||+ ||||||++||..|.+|+ ++||.+++.+.+.|. ..||
T Consensus 213 iyvnpegp~glPdP~~sa~~lR~tF~RMGmnDeEtVALiaGgHT~GkaHca~~~~rl--gpdP~~a~~~~qgLgw~~~c~ 290 (726)
T PRK15061 213 IYVNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDASHV--GPEPEAAPIEEQGLGWKNSYG 290 (726)
T ss_pred eecCCCCCCCCCCcccCHHHHHHHHHHcCCCHHHheeeccCCceeeeCCCcCccccc--CCCCCcCHHHHHhccccccCC
Confidence 0012389999999999999999999999999995 99999999999999998 589999999999885 8999
Q ss_pred CCCCCCCCccccccC---CCCCcccChHHHHHhhcC------------------------------------Cccchhhh
Q 020712 222 DAIPDPKAVQYVRND---RGTPMVLDNNYYRNILDN------------------------------------KGLMMVDH 262 (322)
Q Consensus 222 ~~~~~~~~~~~v~lD---~~tp~~FDn~Yy~~l~~~------------------------------------~glL~SD~ 262 (322)
...+.++.+ ..+| +.||.+|||+||++|+.+ .++|+||+
T Consensus 291 ~g~g~dt~t--sGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~pd~~~~~~~~~~~MLtSD~ 368 (726)
T PRK15061 291 SGKGADTIT--SGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAEDTVPDAHDPSKKHAPTMLTTDL 368 (726)
T ss_pred CCCCCCCcc--ccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccccccCCcccccccccCcccccccH
Confidence 733333333 3678 469999999999999974 58999999
Q ss_pred hcccCcCcHHHHHHHhhcHHHHHHHHHHHHHHhH--hCCCCCCCCC
Q 020712 263 QLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLS--ENNPLTGTKG 306 (322)
Q Consensus 263 ~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~--~lgv~tg~~G 306 (322)
+|..||+++++|++||.|+++|+++|++||.||+ .+|+++-.-|
T Consensus 369 AL~~DP~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~ry~g 414 (726)
T PRK15061 369 ALRFDPEYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKSRYLG 414 (726)
T ss_pred HhhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchhhhcC
Confidence 9999999999999999999999999999999994 4777654333
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=9.2e-46 Score=342.99 Aligned_cols=203 Identities=21% Similarity=0.339 Sum_probs=164.4
Q ss_pred HHHHhCccchhhhHHHHhcccccC-----------------Chhhhc-ccCCCCCchhHHHHHHHHHHHhhCCCCcchhh
Q 020712 55 LLYKRHKNTAFSWLRNIFHDCAVQ-----------------TLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCAD 116 (322)
Q Consensus 55 ~~~~~d~~~aa~llRL~FHDcfv~-----------------~~~E~~-~~~N~~L~g~~~Id~iK~~le~~Cp~~VScAD 116 (322)
.+...+++++|+||||+|||||++ ..+|+. .+.|.+|++|++|+.+ +|||||
T Consensus 33 ~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~~~~En~G~~~n~~l~~~~~i~~~----------~VScAD 102 (264)
T cd08201 33 CAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYELDRPENIGSGFNTTLNFFVNFYSP----------RSSMAD 102 (264)
T ss_pred cCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecCCChhhccCchhhccccceeeccC----------ccCHHH
Confidence 344578999999999999999965 134444 3334456777776543 699999
Q ss_pred HHHHHhHhhhhhcCCCcccccCCCCCCCCCchhhhhcCCCCCCCCHHHHHHHHHHcCCCccchhhhhc-ccccccccccc
Q 020712 117 ILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLG-SHSVGRTHCVK 195 (322)
Q Consensus 117 ilalAardaV~~~GGP~~~v~~GR~D~~~s~~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~~dlVaLsG-aHTiG~~~c~~ 195 (322)
|||||+|+||+.+|||.|+|++||+|++++.+. .||.|+.++++|++.|+++||+++|||+|+| |||||++||..
T Consensus 103 iialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~----glP~P~~~v~~l~~~Fa~~Gfs~~DmVaLsggaHTiG~ahc~~ 178 (264)
T cd08201 103 LIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA----GVPEPQTDLGTTTESFRRQGFSTSEMIALVACGHTLGGVHSED 178 (264)
T ss_pred HHHHHHHHHHHHcCCCeecccccCCCccccccc----cCCCCccCHHHHHHHHHHcCCChHHHheeecCCeeeeeccccc
Confidence 999999999999999999999999999988642 4999999999999999999999999999995 99999999998
Q ss_pred cccccCCCCCCCCCcchhhhhhhcCCCCCCCCCCccccccCCCCCcccChHHHHHhhcCCc----------cchhhhhcc
Q 020712 196 LVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKG----------LMMVDHQLA 265 (322)
Q Consensus 196 f~~rl~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~v~lD~~tp~~FDn~Yy~~l~~~~g----------lL~SD~~L~ 265 (322)
|.++. +|.. ..+.. .++|+ ||.+|||+||.+++.+.. .+.||..++
T Consensus 179 f~~~~----~~g~-----------------~~~~~--~p~ds-tp~~FDn~~f~E~l~g~~~~~L~~~~~~~~~sd~r~f 234 (264)
T cd08201 179 FPEIV----PPGS-----------------VPDTV--LQFFD-TTIQFDNKVVTEYLSGTTNNPLVVGPNNTTNSDLRIF 234 (264)
T ss_pred chhhc----CCcc-----------------ccCCC--CCCCC-CccccchHHHHHHhcCCCCCceeecCCCCccchhhhe
Confidence 87653 1100 00011 27786 999999999999998642 368999999
Q ss_pred cCcCcHHHHHHHhhcHHHHHHHHHHHHHHhHh
Q 020712 266 TDKRTRPYVKKMAKSQDYFFKEFSRAITLLSE 297 (322)
Q Consensus 266 ~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~ 297 (322)
....... ++..| +++.|.+.++..+.||.+
T Consensus 235 ~~d~n~t-~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 235 SSDGNVT-MNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred ecCccHH-HHHhc-ChHHHHHHHHHHHHHHhC
Confidence 8766554 57777 789999999999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=3.2e-38 Score=296.06 Aligned_cols=212 Identities=20% Similarity=0.314 Sum_probs=174.8
Q ss_pred HHHHHHHHhCccchhhhHHHHhcccccC---------------ChhhhcccCCCC--C-chhHHHHHHHHHHHh-hCCC-
Q 020712 51 EQVKLLYKRHKNTAFSWLRNIFHDCAVQ---------------TLSEKEMDRSFG--M-RNFRYIENIKEAVER-ECPG- 110 (322)
Q Consensus 51 ~~v~~~~~~d~~~aa~llRL~FHDcfv~---------------~~~E~~~~~N~~--L-~g~~~Id~iK~~le~-~Cp~- 110 (322)
+.+++.|....-.++.||||+||++.+| +.+|++++.|.+ | +.+.+++.||+++.. .-++
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl~pe~~w~~N~~~~L~~~~~~Le~ik~~~~~~~~~~~ 96 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRLAPQKDWEVNEPEELAKVLAVLEGIQKEFNESQSGGK 96 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccCccccCcCccCcHHHHHHHHHHHHHHHHhcccccCCc
Confidence 3778888888888999999999999998 356999999998 8 688999999999831 1111
Q ss_pred CcchhhHHHHHhHhhhhhcCC-----CcccccCCCCCCCCCchhhhh---cCCCCCCC------------CHHHHHHHHH
Q 020712 111 VVSCADILVLSGRDGVVALGG-----PYIPLKTGRRDGRKSRAEILE---QYLPDHND------------SMSVVLERFA 170 (322)
Q Consensus 111 ~VScADilalAardaV~~~GG-----P~~~v~~GR~D~~~s~~~~~~---~~LP~p~~------------~~~~l~~~F~ 170 (322)
.||.||+|+||+..|||.+|| |.|++.+||.|.+.+... ++ ..+|.+.. ..+.|++.|.
T Consensus 97 ~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td-~~sf~~l~P~adg~rny~~~~~~~~~~~~Lrd~f~ 175 (297)
T cd08200 97 KVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTD-VESFEVLEPKADGFRNYLKKGYRVPPEEMLVDKAQ 175 (297)
T ss_pred cccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCC-cccccccCCCCcccccccccCCCCCHHHHHHHHHH
Confidence 699999999999999999999 999999999999876432 21 13454432 3477999999
Q ss_pred HcCCCccchhhhhccc-ccccccccccccccCCCCCCCCCcchhhhhhhcCCCCCCCCCCccccccCCCCCcccChHHHH
Q 020712 171 AIGIDAPGLVALLGSH-SVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYR 249 (322)
Q Consensus 171 ~~Gl~~~dlVaLsGaH-TiG~~~c~~f~~rl~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~v~lD~~tp~~FDn~Yy~ 249 (322)
++|||++|||||+||| ++|..|..++ .+.|+. +|.+|||.||+
T Consensus 176 rlglsd~EmvaL~Gg~r~lG~~~~~s~-----------------------------~G~wT~-------~p~~f~N~fF~ 219 (297)
T cd08200 176 LLTLTAPEMTVLVGGLRVLGANYGGSK-----------------------------HGVFTD-------RPGVLTNDFFV 219 (297)
T ss_pred hCCCChHHHhheecchhhcccCCCCCC-----------------------------CCCCcC-------CCCccccHHHH
Confidence 9999999999999997 7998874321 123442 89999999999
Q ss_pred HhhcCC--------------------c-----cchhhhhcccCcCcHHHHHHHhhc--HHHHHHHHHHHHHHhHhCC
Q 020712 250 NILDNK--------------------G-----LMMVDHQLATDKRTRPYVKKMAKS--QDYFFKEFSRAITLLSENN 299 (322)
Q Consensus 250 ~l~~~~--------------------g-----lL~SD~~L~~d~~t~~~V~~yA~~--~~~F~~~Fa~Am~Km~~lg 299 (322)
||++.. | .+.+|..|..|++.|++|+.||.| +++||+||++||.||+++.
T Consensus 220 nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~~~F~~DF~~A~~Klmeld 296 (297)
T cd08200 220 NLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNSELRAVAEVYASDDAQEKFVKDFVAAWTKVMNLD 296 (297)
T ss_pred HHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhcC
Confidence 999520 1 268899999999999999999998 9999999999999999874
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=3.2e-33 Score=287.65 Aligned_cols=213 Identities=21% Similarity=0.304 Sum_probs=170.7
Q ss_pred HHHHHHHHH---HHhCccchhhhHHHHhcccccC---------------ChhhhcccCC--CCC-chhHHHHHHHHHHHh
Q 020712 48 IIREQVKLL---YKRHKNTAFSWLRNIFHDCAVQ---------------TLSEKEMDRS--FGM-RNFRYIENIKEAVER 106 (322)
Q Consensus 48 iVr~~v~~~---~~~d~~~aa~llRL~FHDcfv~---------------~~~E~~~~~N--~~L-~g~~~Id~iK~~le~ 106 (322)
+|+++|... +....-.++.|||++||++.++ ..+|++++.| .+| +.+.+++.||++...
T Consensus 429 ~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~pe~~w~~N~p~gL~~vl~~Le~Ik~~f~~ 508 (716)
T TIGR00198 429 LSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLEPQKNWPVNEPTRLAKVLAVLEKIQAEFAK 508 (716)
T ss_pred hHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecchhcCcccCCHHHHHHHHHHHHHHHHHcCC
Confidence 345555553 4555667899999999999998 2569999999 788 789999999999821
Q ss_pred hCCCCcchhhHHHHHhHhhhhhc---CCC--cccccCCCCCCCCCchhhhhcCCC---CC------------CCCHHHHH
Q 020712 107 ECPGVVSCADILVLSGRDGVVAL---GGP--YIPLKTGRRDGRKSRAEILEQYLP---DH------------NDSMSVVL 166 (322)
Q Consensus 107 ~Cp~~VScADilalAardaV~~~---GGP--~~~v~~GR~D~~~s~~~~~~~~LP---~p------------~~~~~~l~ 166 (322)
+.||.||+|+||+..|||.+ ||| .+++..||.|.+.... ++++..| .+ ......|+
T Consensus 509 ---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~t-d~~~~~~l~p~adgfRn~~~~~~~~~~~~~l~ 584 (716)
T TIGR00198 509 ---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMT-DAESFTPLEPIADGFRNYLKRDYAVTPEELLL 584 (716)
T ss_pred ---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCC-CccccccCCCCCcccchhccccccCCHHHHHH
Confidence 26999999999999999998 898 5789999999987643 2333222 11 12346688
Q ss_pred HHHHHcCCCccchhhhhcc-cccccccccccccccCCCCCCCCCcchhhhhhhcCCCCCCCCCCccccccCCCCCcccCh
Q 020712 167 ERFAAIGIDAPGLVALLGS-HSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDN 245 (322)
Q Consensus 167 ~~F~~~Gl~~~dlVaLsGa-HTiG~~~c~~f~~rl~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~v~lD~~tp~~FDn 245 (322)
+.|.++|||++|||||+|| |++|+.|..++ .+.++. +|.+|||
T Consensus 585 d~a~~lglt~~EmvaL~Gg~r~lG~~~~~s~-----------------------------~G~~T~-------~p~~f~N 628 (716)
T TIGR00198 585 DKAQLLTLTAPEMTVLIGGMRVLGANHGGSK-----------------------------HGVFTD-------RVGVLSN 628 (716)
T ss_pred HHHHhCCCChHHHHheecchhhccccCCCCC-----------------------------CCCCcC-------CCCcccc
Confidence 9999999999999999999 59999985321 123332 8999999
Q ss_pred HHHHHhhcCC--------------------c---c--chhhhhcccCcCcHHHHHHHhhcH--HHHHHHHHHHHHHhHhC
Q 020712 246 NYYRNILDNK--------------------G---L--MMVDHQLATDKRTRPYVKKMAKSQ--DYFFKEFSRAITLLSEN 298 (322)
Q Consensus 246 ~Yy~~l~~~~--------------------g---l--L~SD~~L~~d~~t~~~V~~yA~~~--~~F~~~Fa~Am~Km~~l 298 (322)
.||+||++.. | + +.+|.+|..|++.|++|+.||.|+ ++||+||++||.|++++
T Consensus 629 dfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~~lra~aE~YA~dd~~~~F~~DF~~Aw~Klm~l 708 (716)
T TIGR00198 629 DFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNSILRAVAEVYAQDDAREKFVKDFVAAWTKVMNL 708 (716)
T ss_pred HHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCHHHHHHHHHHhcccccchHHHHHHHHHHHHHhC
Confidence 9999998621 2 2 278999999999999999999997 89999999999999998
Q ss_pred CC
Q 020712 299 NP 300 (322)
Q Consensus 299 gv 300 (322)
+-
T Consensus 709 dr 710 (716)
T TIGR00198 709 DR 710 (716)
T ss_pred CC
Confidence 73
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=1.1e-32 Score=282.32 Aligned_cols=211 Identities=19% Similarity=0.306 Sum_probs=173.9
Q ss_pred HHHHHHHhCccchhhhHHHHhcccccC---------------ChhhhcccCCC--CC-chhHHHHHHHHHHHhhCC--CC
Q 020712 52 QVKLLYKRHKNTAFSWLRNIFHDCAVQ---------------TLSEKEMDRSF--GM-RNFRYIENIKEAVERECP--GV 111 (322)
Q Consensus 52 ~v~~~~~~d~~~aa~llRL~FHDcfv~---------------~~~E~~~~~N~--~L-~g~~~Id~iK~~le~~Cp--~~ 111 (322)
.+++.|....-..+.|||++||++.++ ..+|++++.|. +| +.+++++.||++....-. ..
T Consensus 443 ~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~~~~~~~~ 522 (726)
T PRK15061 443 ALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLAPQKDWEVNEPAQLAKVLAVLEGIQAEFNAAQSGGKK 522 (726)
T ss_pred HHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecccccCccccCHHHHHHHHHHHHHHHHHHhhccCCCCc
Confidence 677777777778999999999999998 25699999998 88 688999999999854321 25
Q ss_pred cchhhHHHHHhHhhhhhc---CC--CcccccCCCCCCCCCchhhhhc---CCCCCCC------------CHHHHHHHHHH
Q 020712 112 VSCADILVLSGRDGVVAL---GG--PYIPLKTGRRDGRKSRAEILEQ---YLPDHND------------SMSVVLERFAA 171 (322)
Q Consensus 112 VScADilalAardaV~~~---GG--P~~~v~~GR~D~~~s~~~~~~~---~LP~p~~------------~~~~l~~~F~~ 171 (322)
||.||+|+||+..|||.+ || |.+++..||.|.+.... +++. .+|.+.. ....|++.|.+
T Consensus 523 vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~t-d~esf~~l~P~Adgfrny~~~~~~~~~e~~L~d~a~~ 601 (726)
T PRK15061 523 VSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQT-DVESFAVLEPKADGFRNYLKKGYSVSPEELLVDKAQL 601 (726)
T ss_pred eeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCC-CcccccccCCCCccccccccccCCCCHHHHHHHHHHh
Confidence 999999999999999998 68 99999999999987542 3332 4576431 23789999999
Q ss_pred cCCCccchhhhhccc-ccccccccccccccCCCCCCCCCcchhhhhhhcCCCCCCCCCCccccccCCCCCcccChHHHHH
Q 020712 172 IGIDAPGLVALLGSH-SVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRN 250 (322)
Q Consensus 172 ~Gl~~~dlVaLsGaH-TiG~~~c~~f~~rl~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~v~lD~~tp~~FDn~Yy~~ 250 (322)
+|||++|||||+||| ++|..|..++ .+.++. +|.+|||.||+|
T Consensus 602 lglt~~EmvaL~Gg~r~Lg~~~~~S~-----------------------------~G~~T~-------~p~~fsNdfFvn 645 (726)
T PRK15061 602 LTLTAPEMTVLVGGLRVLGANYGGSK-----------------------------HGVFTD-------RPGVLTNDFFVN 645 (726)
T ss_pred CCCChHHHhheecchhhcccCCCCCC-----------------------------CCCCcC-------CCCccccHHHHH
Confidence 999999999999997 7888874321 123332 899999999999
Q ss_pred hhcCC--------------------c---c--chhhhhcccCcCcHHHHHHHhhc--HHHHHHHHHHHHHHhHhCC
Q 020712 251 ILDNK--------------------G---L--MMVDHQLATDKRTRPYVKKMAKS--QDYFFKEFSRAITLLSENN 299 (322)
Q Consensus 251 l~~~~--------------------g---l--L~SD~~L~~d~~t~~~V~~yA~~--~~~F~~~Fa~Am~Km~~lg 299 (322)
|++.. | + +.+|..|.+|++.|++|+.||.| +++||+||++||.|+++++
T Consensus 646 LLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds~lRa~aEvYA~dd~~~kF~~DF~~Aw~Kvmeld 721 (726)
T PRK15061 646 LLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNSQLRALAEVYASDDAKEKFVRDFVAAWTKVMNLD 721 (726)
T ss_pred HhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCC
Confidence 99521 1 1 47899999999999999999998 9999999999999999986
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.96 E-value=8.7e-30 Score=250.80 Aligned_cols=245 Identities=18% Similarity=0.252 Sum_probs=192.8
Q ss_pred HHHHHHHHHHHhC--------ccchhhhHHHHhcccccC---------------ChhhhcccCCCCC-chhHHHHHHHHH
Q 020712 48 IIREQVKLLYKRH--------KNTAFSWLRNIFHDCAVQ---------------TLSEKEMDRSFGM-RNFRYIENIKEA 103 (322)
Q Consensus 48 iVr~~v~~~~~~d--------~~~aa~llRL~FHDcfv~---------------~~~E~~~~~N~~L-~g~~~Id~iK~~ 103 (322)
.|...+...+... ...++-+|||+||-+.++ +.++..+|.|.+| +++.++..||++
T Consensus 71 Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~G~qRFaPlnSWPDN~nLDKarRLLWPIKkK 150 (730)
T COG0376 71 AVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFAPLNSWPDNANLDKARRLLWPIKKK 150 (730)
T ss_pred HHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCCCceecccccCCCcccchHHHHHHhhhHhHh
Confidence 3444555555432 248999999999999998 3578899999999 799999999999
Q ss_pred HHhhCCCCcchhhHHHHHhHhhhhhcCCCcccccCCCCCCCCCchh----------------------------------
Q 020712 104 VERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAE---------------------------------- 149 (322)
Q Consensus 104 le~~Cp~~VScADilalAardaV~~~GGP~~~v~~GR~D~~~s~~~---------------------------------- 149 (322)
+ +..+|+||++.|++..|++.+|++++.+..||.|-..+...
T Consensus 151 Y----G~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~PlaavqMGLIY 226 (730)
T COG0376 151 Y----GRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQMGLIY 226 (730)
T ss_pred h----cccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhheeeeEE
Confidence 9 77999999999999999999999999999999998777540
Q ss_pred ---hhhcCCCCCCCCHHHHHHHHHHcCCCccchhhhh-cccccccccccccccccCCCCCCCCCcchhhhh--hhcCCCC
Q 020712 150 ---ILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALL-GSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHM--LHKCPDA 223 (322)
Q Consensus 150 ---~~~~~LP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-GaHTiG~~~c~~f~~rl~~~~dp~~~~~~~~~L--~~~Cp~~ 223 (322)
+-+...|+|..+..+++..|++|+++++|.|||+ ||||+|.+|...-.+-+ +++|.-.+--.+.| ...|-.+
T Consensus 227 VNPEGpng~PDpl~aA~dIRetFaRMaMNDeETVALiaGGHtfGKtHGag~a~~v--g~ePe~a~ie~qGlGW~~~~g~G 304 (730)
T COG0376 227 VNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASNV--GPEPEAAPIEQQGLGWANTYGSG 304 (730)
T ss_pred eCCCCCCCCCChhhhHHHHHHHHHHhcCCcHhhhhhhhcccccccccCCCchhhc--CCCccccchhhhccccccccCCC
Confidence 1123589999999999999999999999999997 69999999975422211 56665554444444 3344332
Q ss_pred CCCCCCccc--cccCCCCCcccChHHHHHhhcCC-----------------------------------ccchhhhhccc
Q 020712 224 IPDPKAVQY--VRNDRGTPMVLDNNYYRNILDNK-----------------------------------GLMMVDHQLAT 266 (322)
Q Consensus 224 ~~~~~~~~~--v~lD~~tp~~FDn~Yy~~l~~~~-----------------------------------glL~SD~~L~~ 266 (322)
.|.+..+.. +..- .||++|||.||.+|+... .+|.+|.+|--
T Consensus 305 ~G~dtitsGlE~~Wt-~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~MlttDlaLr~ 383 (730)
T COG0376 305 KGPDTITSGLEGAWT-TTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLTTDLALRF 383 (730)
T ss_pred cCcccccccccccCC-CCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceeeccchhhhc
Confidence 222222110 2233 389999999999998531 47999999999
Q ss_pred CcCcHHHHHHHhhcHHHHHHHHHHHHHHhHhCC
Q 020712 267 DKRTRPYVKKMAKSQDYFFKEFSRAITLLSENN 299 (322)
Q Consensus 267 d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~lg 299 (322)
||..+.+.++|..|++.|.+.|+.||-||..-.
T Consensus 384 DP~Y~kIs~rf~e~pd~F~~~FArAWfKLtHRD 416 (730)
T COG0376 384 DPEYEKISRRFLEDPDEFADAFARAWFKLTHRD 416 (730)
T ss_pred ChHHHHHHHHHHhCHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999998643
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.27 E-value=2e-11 Score=121.79 Aligned_cols=207 Identities=22% Similarity=0.352 Sum_probs=147.1
Q ss_pred HHHHHHHhCccchhhhHHHHhcccccC---------------ChhhhcccCCC--CC-chhHHHHHHHHHHHhhCCCCcc
Q 020712 52 QVKLLYKRHKNTAFSWLRNIFHDCAVQ---------------TLSEKEMDRSF--GM-RNFRYIENIKEAVERECPGVVS 113 (322)
Q Consensus 52 ~v~~~~~~d~~~aa~llRL~FHDcfv~---------------~~~E~~~~~N~--~L-~g~~~Id~iK~~le~~Cp~~VS 113 (322)
.++..|.+..-....|+-.+|-.+.++ ..+.|+++-|. -| +-+.+++.|.+... ..||
T Consensus 453 ~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLaPqkdWevN~P~~l~kvl~~le~iq~~fn----kkvS 528 (730)
T COG0376 453 ALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLAPQKDWEVNQPAELAKVLAVLEKIQKEFN----KKVS 528 (730)
T ss_pred HHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeecccccCCCCCHHHHHHHHHHHHHHHHHhc----Cccc
Confidence 567777777777889999999998887 14567788884 34 56788888888774 4799
Q ss_pred hhhHHHHHhHhhhhh---cCCCcc--cccCCCCCCCCCchhhhhcC--C-CCC--C----------CCHHHHHHHHHHcC
Q 020712 114 CADILVLSGRDGVVA---LGGPYI--PLKTGRRDGRKSRAEILEQY--L-PDH--N----------DSMSVVLERFAAIG 173 (322)
Q Consensus 114 cADilalAardaV~~---~GGP~~--~v~~GR~D~~~s~~~~~~~~--L-P~p--~----------~~~~~l~~~F~~~G 173 (322)
.||+|+|++..+|+. .+|-.+ |+..||.|+...... ++.- | |-. + ..-.-|++.-+-.+
T Consensus 529 lADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtD-v~sf~~LeP~aDGfRNy~~~~~~~~pe~~LvDkAqlL~ 607 (730)
T COG0376 529 LADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTD-VESFAVLEPIADGFRNYVKKDYVLTPEELLVDKAQLLT 607 (730)
T ss_pred hhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcc-hhhhhcccccchhhhhhccCCCcCCHHHHHHHHHHHhc
Confidence 999999999999987 367654 567899999766432 2211 1 221 1 12344678888899
Q ss_pred CCccchhhhhccc-ccccccccccccccCCCCCCCCCcchhhhhhhcCCCCCCCCCCccccccCCCCCcccChHHHHHhh
Q 020712 174 IDAPGLVALLGSH-SVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNIL 252 (322)
Q Consensus 174 l~~~dlVaLsGaH-TiG~~~c~~f~~rl~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~v~lD~~tp~~FDn~Yy~~l~ 252 (322)
||..||++|.||- .+|.-+.. .... |.-| .|.++.|.||.||+
T Consensus 608 LtapemtVLiGGlRvLg~n~g~--------------------------------s~~G--VfT~--~pg~LtndFFvnLl 651 (730)
T COG0376 608 LTAPEMTVLIGGLRVLGANYGG--------------------------------SKHG--VFTD--RPGVLTNDFFVNLL 651 (730)
T ss_pred cCCccceEEEcceEeeccCCCC--------------------------------Cccc--eecc--Ccccccchhhhhhh
Confidence 9999999999874 33332211 0011 1222 57777777888777
Q ss_pred cC----------C----------cc-----chhhhhcccCcCcHHHHHHHhhc--HHHHHHHHHHHHHHhHhCC
Q 020712 253 DN----------K----------GL-----MMVDHQLATDKRTRPYVKKMAKS--QDYFFKEFSRAITLLSENN 299 (322)
Q Consensus 253 ~~----------~----------gl-----L~SD~~L~~d~~t~~~V~~yA~~--~~~F~~~Fa~Am~Km~~lg 299 (322)
+- + |- -..|..+-+++..|.+.+.||.+ +++|.+||+.||.|..++.
T Consensus 652 DM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns~LRA~aEVYa~dda~ekFv~DFvaaw~kVMn~D 725 (730)
T COG0376 652 DMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNSELRALAEVYASDDAKEKFVKDFVAAWTKVMNLD 725 (730)
T ss_pred hccceeeeccccccceeccccccCceEeeeeEEeEEecCcHHHHHHHHHHhccchHHHHHHHHHHHHHHHhccc
Confidence 42 1 21 24677777888999999999975 7899999999999998874
No 19
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=75.29 E-value=2.6 Score=33.89 Aligned_cols=23 Identities=30% Similarity=0.261 Sum_probs=13.4
Q ss_pred CcchHHHHHHHHHHHHHHHhhhh
Q 020712 1 MGTKAVFLLLALLSFSAVSLRSA 23 (322)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~ 23 (322)
|++|..|||.++++.+|+..+.+
T Consensus 1 MaSK~~llL~l~LA~lLlisSev 23 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALLLISSEV 23 (95)
T ss_pred CchhHHHHHHHHHHHHHHHHhhh
Confidence 89887555545555555544444
No 20
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=51.14 E-value=13 Score=29.04 Aligned_cols=30 Identities=13% Similarity=-0.030 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHhHhCCCCCCCCCcccccccccc
Q 020712 283 YFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 316 (322)
Q Consensus 283 ~F~~~Fa~Am~Km~~lgv~tg~~GeIR~~C~~~n 316 (322)
+....|..||.||+.||... .---+|+.|=
T Consensus 2 ~m~~~F~~am~KlavLG~d~----~~LiDCSdVI 31 (80)
T PF11895_consen 2 KMQSAFKAAMAKLAVLGHDR----SDLIDCSDVI 31 (80)
T ss_dssp HHHHHHHHHHHHHCTTTS-G----GGSEE-GGGS
T ss_pred hHHHHHHHHHHHHHHhcCCh----hhcccchhhc
Confidence 35688999999999997532 1223676653
No 21
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=46.22 E-value=60 Score=27.37 Aligned_cols=80 Identities=18% Similarity=0.170 Sum_probs=52.0
Q ss_pred HHHHHHHHHhhhhccCCCCC-----CCCCcCcccccCccHHHHHHHHHHHHHHhCccchhhhHHHHh---cccccCChhh
Q 020712 11 ALLSFSAVSLRSALAENEED-----PGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIF---HDCAVQTLSE 82 (322)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~-----~~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~F---HDcfv~~~~E 82 (322)
+..||||.+|..-.|..+.+ +.=+.+|-.+.--+ |.-|++.+...+.+...|.|.=+|+|+ ||-
T Consensus 7 i~tc~lL~~f~aqga~feep~as~aqpgs~~~~~~~vhD-eeHIkeHLegki~~~a~mtpeqlqfHYF~MHDl------- 78 (144)
T KOG4065|consen 7 ISTCFLLLVFEAQGAKFEEPAASFAQPGSMGLDKKEVHD-EEHIKEHLEGKIEKVAKMTPEQLQFHYFSMHDL------- 78 (144)
T ss_pred HHHHHHHHHHhcChhhhcCchhhhcCCcccccccccccc-HHHHHHHHhcccchhhhCCHHHHhhhhhhhhcc-------
Confidence 67799999887554332111 11233454444333 456777888888888889999988876 443
Q ss_pred hcccCCCCCchhHHHHHHH
Q 020712 83 KEMDRSFGMRNFRYIENIK 101 (322)
Q Consensus 83 ~~~~~N~~L~g~~~Id~iK 101 (322)
..|+-|.|+++|..|-
T Consensus 79 ---dknn~lDGiEl~kAiT 94 (144)
T KOG4065|consen 79 ---DKNNFLDGIELLKAIT 94 (144)
T ss_pred ---CcCCcchHHHHHHHHH
Confidence 2466678888887664
No 22
>PHA03163 hypothetical protein; Provisional
Probab=32.86 E-value=63 Score=25.75 Aligned_cols=39 Identities=21% Similarity=0.249 Sum_probs=21.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhccCCCCCCCCCcCcccccCc
Q 020712 4 KAVFLLLALLSFSAVSLRSALAENEEDPGLVMNFYKDTCP 43 (322)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~fY~~sCP 43 (322)
+-|+|+ +.+||+=-+---.-+.+.....-.++||+.+|-
T Consensus 8 ~~i~~l-i~lcl~~nv~~~~~~~n~t~p~~~~~FYs~~C~ 46 (92)
T PHA03163 8 HGIFLL-ICLCLLDNVSQVLCQNNSTTPHDFDMFHQYDCN 46 (92)
T ss_pred hhHHHH-HHHHHhhhhHHHHHhcCCCCCCCCcccccCCCC
Confidence 456676 777764322110101111344567889999995
No 23
>TIGR00874 talAB transaldolase. This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis.
Probab=32.63 E-value=2.4e+02 Score=27.53 Aligned_cols=48 Identities=13% Similarity=-0.020 Sum_probs=28.9
Q ss_pred hcCCCcccccCCCCCCCCCchhhhhcCCC----CCCCCHHHHHHHHHHcCCCc
Q 020712 128 ALGGPYIPLKTGRRDGRKSRAEILEQYLP----DHNDSMSVVLERFAAIGIDA 176 (322)
Q Consensus 128 ~~GGP~~~v~~GR~D~~~s~~~~~~~~LP----~p~~~~~~l~~~F~~~Gl~~ 176 (322)
.+|-..+..+.||-|-..-..... ...+ ++-..+.++.+.|++.|+..
T Consensus 167 ~AGa~~ISPFVgRi~dw~~~~~g~-~~~~~~~d~Gv~~v~~i~~~~k~~g~~T 218 (317)
T TIGR00874 167 EAKVTLISPFVGRILDWYKAATGK-KEYSIEEDPGVASVKKIYNYYKKHGYPT 218 (317)
T ss_pred HcCCCEEEeecchHhHhhhhccCc-cccccccCchHHHHHHHHHHHHHcCCCc
Confidence 458888999999986532211100 0111 12345777888898888864
No 24
>PTZ00411 transaldolase-like protein; Provisional
Probab=29.15 E-value=40 Score=33.16 Aligned_cols=76 Identities=20% Similarity=0.256 Sum_probs=41.1
Q ss_pred cchhhHHHHHhHhhh--hhcCCCcccccCCCCCCCCCchhhhhcCCCCC---CCCHHHHHHHHHHcCCC----------c
Q 020712 112 VSCADILVLSGRDGV--VALGGPYIPLKTGRRDGRKSRAEILEQYLPDH---NDSMSVVLERFAAIGID----------A 176 (322)
Q Consensus 112 VScADilalAardaV--~~~GGP~~~v~~GR~D~~~s~~~~~~~~LP~p---~~~~~~l~~~F~~~Gl~----------~ 176 (322)
|.|-=.+.+....|+ ..+|-..+..++||.+...-.........+.. -..+.++.+.|++.|+. .
T Consensus 161 I~~N~TlvFS~~QA~aaaeAGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~g~~T~Im~ASfRn~ 240 (333)
T PTZ00411 161 IHCNLTLLFSFAQAVACAQAGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYYKKHGYKTIVMGASFRNT 240 (333)
T ss_pred CceeEeEecCHHHHHHHHHcCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHHHHcCCCeEEEecccCCH
Confidence 444333344433333 23577788999999855422111111111211 22567788888888875 4
Q ss_pred cchhhhhcccc
Q 020712 177 PGLVALLGSHS 187 (322)
Q Consensus 177 ~dlVaLsGaHT 187 (322)
+|+..|.|+|.
T Consensus 241 ~qi~~laG~D~ 251 (333)
T PTZ00411 241 GEILELAGCDK 251 (333)
T ss_pred HHHHHHHCCCE
Confidence 56666667664
No 25
>PF03058 Sar8_2: Sar8.2 family; InterPro: IPR004297 Members of this family are found in Solanaceae spp. plants, a taxonomic group (family) that includes pepper and tobacco plant species. Synthesis of these proteins is induced by Tobacco mosaic virus and salicylic acid []; indeed they are thought to be involved in the development of systemic acquired resistance (SAR) after an initial hypersensitive response to microbial infection [, ]. SAR is characterised by long-lasting resistance to infection by a wide range of pathogens, extending to plant tissues distant from the initial infection site [].
Probab=27.39 E-value=44 Score=26.71 Aligned_cols=28 Identities=21% Similarity=0.216 Sum_probs=18.1
Q ss_pred CcchHHHHHHHHHHHHHHHhhhhc-cCCC
Q 020712 1 MGTKAVFLLLALLSFSAVSLRSAL-AENE 28 (322)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 28 (322)
|..+..+++...+++||+..++.. |++|
T Consensus 1 M~~Ktnlfl~lSLailLmIISSqv~AREm 29 (93)
T PF03058_consen 1 MVSKTNLFLCLSLAILLMIISSQVDAREM 29 (93)
T ss_pred CcchhhhHHHHHHHHHHHHHhhHHHHHHH
Confidence 666664445477777888877654 5654
No 26
>PF15240 Pro-rich: Proline-rich
Probab=26.84 E-value=46 Score=29.86 Aligned_cols=13 Identities=46% Similarity=0.554 Sum_probs=9.5
Q ss_pred HHHHHHHHHhhhh
Q 020712 11 ALLSFSAVSLRSA 23 (322)
Q Consensus 11 ~~~~~~~~~~~~~ 23 (322)
|+|+..||+|+++
T Consensus 4 VLLSvALLALSSA 16 (179)
T PF15240_consen 4 VLLSVALLALSSA 16 (179)
T ss_pred HHHHHHHHHhhhc
Confidence 7777777777766
No 27
>PRK12346 transaldolase A; Provisional
Probab=23.81 E-value=51 Score=32.15 Aligned_cols=75 Identities=15% Similarity=0.117 Sum_probs=43.9
Q ss_pred cchhhHHHHHhHhhhh--hcCCCcccccCCCCCCCCCchhhhhcCCCCC----CCCHHHHHHHHHHcCCC----------
Q 020712 112 VSCADILVLSGRDGVV--ALGGPYIPLKTGRRDGRKSRAEILEQYLPDH----NDSMSVVLERFAAIGID---------- 175 (322)
Q Consensus 112 VScADilalAardaV~--~~GGP~~~v~~GR~D~~~s~~~~~~~~LP~p----~~~~~~l~~~F~~~Gl~---------- 175 (322)
|+|-=.+.+....++. .+|-..+..++||-|...-.... ...++.. -..+.++.+.|++.|+.
T Consensus 150 I~~n~TliFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~-~~~~~~~~~~Gv~~v~~i~~~~k~~~~~T~Vm~ASfRn 228 (316)
T PRK12346 150 INCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARKP-MDPYVVEEDPGVKSVRNIYDYYKQHRYETIVMGASFRR 228 (316)
T ss_pred CceeEEEecCHHHHHHHHHcCCCEEEecccHHHHhhhhccc-cccccccCCChHHHHHHHHHHHHHcCCCcEEEecccCC
Confidence 5555545555554443 36888899999998764322111 1112221 23577788888888875
Q ss_pred ccchhhhhcccc
Q 020712 176 APGLVALLGSHS 187 (322)
Q Consensus 176 ~~dlVaLsGaHT 187 (322)
.+|+.+|.|+|.
T Consensus 229 ~~qi~alaG~d~ 240 (316)
T PRK12346 229 TEQILALAGCDR 240 (316)
T ss_pred HHHHHHHhCCCE
Confidence 355666666653
No 28
>PF06163 DUF977: Bacterial protein of unknown function (DUF977); InterPro: IPR010382 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=23.27 E-value=1e+02 Score=26.22 Aligned_cols=32 Identities=25% Similarity=0.314 Sum_probs=17.8
Q ss_pred HHHHHHHHHHhHhCCCCCC-CCCcccccccccc
Q 020712 285 FKEFSRAITLLSENNPLTG-TKGEIRKVCNLAN 316 (322)
Q Consensus 285 ~~~Fa~Am~Km~~lgv~tg-~~GeIR~~C~~~n 316 (322)
+.||-.|=.||..-+.... .+||||+.=+..|
T Consensus 71 ~~dw~~~~~~~~~~~~~~~~pdg~~rry~~~~n 103 (127)
T PF06163_consen 71 RKDWDKARKKLVDPDLIWKLPDGEIRRYDRRQN 103 (127)
T ss_pred HHHHHHhHHhhccchhhhhCCCccccccccccc
Confidence 3455666666633222222 4799998655444
No 29
>PLN00017 photosystem I reaction centre subunit VI; Provisional
Probab=20.41 E-value=62 Score=25.56 Aligned_cols=20 Identities=25% Similarity=0.341 Sum_probs=16.4
Q ss_pred HhhcHHHHHHHHHHHHHHhH
Q 020712 277 MAKSQDYFFKEFSRAITLLS 296 (322)
Q Consensus 277 yA~~~~~F~~~Fa~Am~Km~ 296 (322)
|-..|++||+.|+..+.|=+
T Consensus 38 Y~~~QskFFe~~A~~~tkR~ 57 (90)
T PLN00017 38 YNPLQSKFFETFAAPFTKRG 57 (90)
T ss_pred CChHHHHHHHHHhhhhhHHH
Confidence 66779999999999887743
Done!