BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020714
(322 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225423607|ref|XP_002274221.1| PREDICTED: GTP-binding protein ERG-like [Vitis vinifera]
Length = 423
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/323 (61%), Positives = 240/323 (74%), Gaps = 20/323 (6%)
Query: 1 MKALRALRTLAPFAEKPNKPRLNPLFIHRFYSAQPQQTDNET-------ENDCDSVFDSS 53
MKALR LR L + K KP L ++RFY+AQPQQ D+ T D D+VFDSS
Sbjct: 1 MKALRGLRALTTLSSKTQKPHLTSNLLYRFYAAQPQQQDHSTTTNSLEDHEDDDAVFDSS 60
Query: 54 YFRIPTIDDPQNNNAAKKQEPTWDEKYRERTDRIVFGEEAQKGKLRIFQEEEEERKHRAL 113
F +P + + +PTWD +YR + DR +FGEE QK K EE+ERK RA+
Sbjct: 61 QFALPNM-----GTSPVPDQPTWDREYRAKADRTIFGEETQKQK-----SEEDERKRRAI 110
Query: 114 AKALLQAALERQEEEEEE---VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRK 170
A Q+ +EE+ VKEEDQ+S++VGIIGAPNAGKSS+ N++VGTKVAAVSRK
Sbjct: 111 VLAKALLEAALQKPDEEDDMPVKEEDQRSLSVGIIGAPNAGKSSLTNHVVGTKVAAVSRK 170
Query: 171 TNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVF 230
TNTTTHEVLGVMTK +TQIC FDTPGLML SGY + D++ RVESAWS+V L++VL+V+F
Sbjct: 171 TNTTTHEVLGVMTKGNTQICFFDTPGLMLKSSGYPYSDMRARVESAWSSVGLYDVLIVIF 230
Query: 231 DVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYE 290
DVHRHL+ PDSRV+RLIERMG QA PKQKRVLCMNKVDLV KKKDLLKVA++FK LPGYE
Sbjct: 231 DVHRHLSRPDSRVVRLIERMGAQAHPKQKRVLCMNKVDLVEKKKDLLKVADEFKDLPGYE 290
Query: 291 RIFMTSGLKGAGLKALTQYLMEQ 313
R FM SGLKG+G+K LTQ+LMEQ
Sbjct: 291 RYFMISGLKGSGVKDLTQFLMEQ 313
>gi|297738021|emb|CBI27222.3| unnamed protein product [Vitis vinifera]
Length = 423
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/323 (61%), Positives = 240/323 (74%), Gaps = 20/323 (6%)
Query: 1 MKALRALRTLAPFAEKPNKPRLNPLFIHRFYSAQPQQTDNET-------ENDCDSVFDSS 53
MKALR LR L + K KP L ++RFY+AQPQQ D+ T D D+VFDSS
Sbjct: 1 MKALRGLRALTTLSSKTQKPHLTSNLLYRFYAAQPQQQDHSTTTNSLEDHEDDDAVFDSS 60
Query: 54 YFRIPTIDDPQNNNAAKKQEPTWDEKYRERTDRIVFGEEAQKGKLRIFQEEEEERKHRAL 113
F +P + + +PTWD +YR + DR +FGEE QK K EE+ERK RA+
Sbjct: 61 QFALPNM-----GTSPVPDQPTWDREYRAKADRTIFGEETQKQK-----SEEDERKRRAI 110
Query: 114 AKALLQAALERQEEEEEE---VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRK 170
A Q+ +EE+ VKEEDQ+S++VGIIGAPNAGKSS+ N++VGTKVAAVSRK
Sbjct: 111 VLAKALLEAALQKPDEEDDMPVKEEDQRSLSVGIIGAPNAGKSSLTNHVVGTKVAAVSRK 170
Query: 171 TNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVF 230
TNTTTHEVLGVMTK +TQIC FDTPGLML SGY + D++ RVESAWS+V L++VL+V+F
Sbjct: 171 TNTTTHEVLGVMTKGNTQICFFDTPGLMLKSSGYPYSDMRARVESAWSSVGLYDVLIVIF 230
Query: 231 DVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYE 290
DVHRHL+ PDSRV+RLIERMG QA PKQKRVLCMNKVDLV KKKDLLKVA++FK LPGYE
Sbjct: 231 DVHRHLSRPDSRVVRLIERMGAQAHPKQKRVLCMNKVDLVEKKKDLLKVADEFKDLPGYE 290
Query: 291 RIFMTSGLKGAGLKALTQYLMEQ 313
R FM SGLKG+G+K LTQ+LMEQ
Sbjct: 291 RYFMISGLKGSGVKDLTQFLMEQ 313
>gi|147860032|emb|CAN83131.1| hypothetical protein VITISV_029539 [Vitis vinifera]
Length = 928
Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/323 (61%), Positives = 240/323 (74%), Gaps = 20/323 (6%)
Query: 1 MKALRALRTLAPFAEKPNKPRLNPLFIHRFYSAQPQQTDNET-------ENDCDSVFDSS 53
MKALR LR L + K KP L ++RFY+AQPQQ D+ T D D+VFDSS
Sbjct: 467 MKALRGLRALTTLSSKTQKPHLTSNLLYRFYAAQPQQQDHSTTTNSLEDHEDDDAVFDSS 526
Query: 54 YFRIPTIDDPQNNNAAKKQEPTWDEKYRERTDRIVFGEEAQKGKLRIFQEEEEERKHRAL 113
F +P + + +PTWD +YR + DR +FGEE QK K EE+ERK RA+
Sbjct: 527 QFALPNM-----GTSPVPDQPTWDREYRAKADRTIFGEETQKQK-----SEEDERKRRAI 576
Query: 114 AKALLQAALERQEEEEEE---VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRK 170
A Q+ +EE+ VKEEDQ+S++VGIIGAPNAGKSS+ N++VGTKVAAVSRK
Sbjct: 577 VLAKALLEAALQKPDEEDDMPVKEEDQRSLSVGIIGAPNAGKSSLTNHVVGTKVAAVSRK 636
Query: 171 TNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVF 230
TNTTTHEVLGVMTK +TQIC FDTPGLML SGY + D++ RVESAWS+V L++VL+V+F
Sbjct: 637 TNTTTHEVLGVMTKGNTQICFFDTPGLMLKSSGYPYSDMRARVESAWSSVGLYDVLIVIF 696
Query: 231 DVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYE 290
DVHRHL+ PDSRV+RLIERMG QA PKQKRVLCMNKVDLV KKKDLLKVA++FK LPGYE
Sbjct: 697 DVHRHLSRPDSRVVRLIERMGAQAHPKQKRVLCMNKVDLVEKKKDLLKVADEFKDLPGYE 756
Query: 291 RIFMTSGLKGAGLKALTQYLMEQ 313
R FM SGLKG+G+K LTQ+LMEQ
Sbjct: 757 RYFMISGLKGSGVKDLTQFLMEQ 779
>gi|255551213|ref|XP_002516653.1| GTP-binding protein erg, putative [Ricinus communis]
gi|223544148|gb|EEF45672.1| GTP-binding protein erg, putative [Ricinus communis]
Length = 427
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/318 (65%), Positives = 253/318 (79%), Gaps = 9/318 (2%)
Query: 4 LRALRTLAPFAEKP-NKPRLNPLFIHRFYSAQPQQTDNETENDCDSVFDSSYFRIPTIDD 62
++A R L KP N L+ + F+SAQPQQ D+E E++ DSVFDSS++ +P D
Sbjct: 1 MKAFRILGTLTSKPRNSHPLHQTLLSHFFSAQPQQNDSENESN-DSVFDSSHYTVPNFDT 59
Query: 63 PQNNNAAKK--QEPTWDEKYRERTDRIVFGEEAQKGKLRIFQEEEE---ERKHRALAKAL 117
++++++ QEP WD+KYR+R DR+VF +E QK + QEEEE + + R LAKAL
Sbjct: 60 NNSSSSSRTTPQEPAWDKKYRQRADRLVFNQEPQKANFKRLQEEEEEEVDERSRVLAKAL 119
Query: 118 LQAALER--QEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTT 175
L+AALER ++E+E V+EEDQKS+ VGI+GAPNAGKS++ NYMVGTKV+AVSRKTNTTT
Sbjct: 120 LRAALERPDDQDEDEVVREEDQKSLCVGIVGAPNAGKSALTNYMVGTKVSAVSRKTNTTT 179
Query: 176 HEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRH 235
HEVLGVMTK DTQIC FDTPGLML +GYS+KDVK RVE+AWS VNL+++LMVVFDVHRH
Sbjct: 180 HEVLGVMTKGDTQICFFDTPGLMLKSNGYSYKDVKARVENAWSTVNLYDMLMVVFDVHRH 239
Query: 236 LTSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMT 295
LT PDSRVIRLIER+G Q KQKR+LCMNKVDLV KKKDLLKVAEQFK LPGY+R FM
Sbjct: 240 LTRPDSRVIRLIERVGSQTNTKQKRILCMNKVDLVEKKKDLLKVAEQFKDLPGYDRCFMI 299
Query: 296 SGLKGAGLKALTQYLMEQ 313
SGLKGAG+K LTQYL+EQ
Sbjct: 300 SGLKGAGVKDLTQYLIEQ 317
>gi|449433519|ref|XP_004134545.1| PREDICTED: GTP-binding protein ERG-like [Cucumis sativus]
gi|449506779|ref|XP_004162846.1| PREDICTED: GTP-binding protein ERG-like [Cucumis sativus]
Length = 430
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/327 (62%), Positives = 248/327 (75%), Gaps = 21/327 (6%)
Query: 1 MKALRALRTLAPFAEKPNKPRL-NPLFIHRFYSAQPQQTDN-------ETENDCDSVFDS 52
MKALRALR K ++P L NP+F R+YSAQP+Q D+ +TEN DSVFDS
Sbjct: 1 MKALRALRIATTIPPKSHRPFLTNPIFPPRYYSAQPEQDDSNHNPTLSDTENAPDSVFDS 60
Query: 53 SYFRIPTIDDPQNNNAAKKQEPT--WDEKYRERTDRIVFGEEAQKGKLRIFQEEEEERKH 110
S F IPT+D + K EP WD+KYR + D+++FG++++ K ++ +EEEE R+
Sbjct: 61 SQFDIPTMD------STTKTEPDSGWDKKYRAKADKLIFGKDSEGVKYKLMEEEEERRR- 113
Query: 111 RALAKALLQAALER----QEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAA 166
RALAK+LL+A LE QE+ E VKEEDQKS+AVGI+GAPNAGKS++ NYMVGTKVAA
Sbjct: 114 RALAKSLLEAVLETADDDQEDGERTVKEEDQKSLAVGIVGAPNAGKSALTNYMVGTKVAA 173
Query: 167 VSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVL 226
VSRK NTTTHEVLG MTK +TQIC FDTPGLML G+ HKD+K RV+SAWS+V L++VL
Sbjct: 174 VSRKINTTTHEVLGTMTKGNTQICFFDTPGLMLKSKGFPHKDMKARVQSAWSSVELYDVL 233
Query: 227 MVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHL 286
+V+FDVHRHL PDSRV+ LI+RMG PKQKRVLCMNKVDLV KKDLL VAEQFK L
Sbjct: 234 IVIFDVHRHLARPDSRVVGLIKRMGASPHPKQKRVLCMNKVDLVENKKDLLTVAEQFKDL 293
Query: 287 PGYERIFMTSGLKGAGLKALTQYLMEQ 313
PGYER FM SGLKGAG+K L++YL EQ
Sbjct: 294 PGYERYFMISGLKGAGVKDLSKYLTEQ 320
>gi|224138540|ref|XP_002326628.1| predicted protein [Populus trichocarpa]
gi|222833950|gb|EEE72427.1| predicted protein [Populus trichocarpa]
Length = 428
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/324 (62%), Positives = 244/324 (75%), Gaps = 17/324 (5%)
Query: 1 MKALRALRTLAPFAEKPNKPRL--NPLFIHRFYSAQPQQTDNETEND-CDSVFDSSYFRI 57
MK+LRALR + A KP P + N + F+SAQP Q NE+END DSVFDS+++
Sbjct: 1 MKSLRALRIASTLASKP-PPFVCTNQNLLSHFFSAQPDQ--NESENDNSDSVFDSTHY-- 55
Query: 58 PTIDDPQNNNA----AKKQEPTWDEKYRERTDRIVFGEEAQKGKLRIFQEEEEERKHRAL 113
TID NNN+ A +EPTWDE+YRER D++VF +E QKGKL+I +E+EE+ + +
Sbjct: 56 -TIDSSFNNNSNTTSATHKEPTWDERYRERVDKLVFKKETQKGKLQILEEQEEQVEEQRR 114
Query: 114 AKALLQAALERQEEEEEEVKEE----DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSR 169
E +EE EE DQKS++VGIIGAPNAGKS++ N+MVGTKVAAVSR
Sbjct: 115 RLLAKALLEAALERPDEEEGEEVREEDQKSLSVGIIGAPNAGKSALTNFMVGTKVAAVSR 174
Query: 170 KTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVV 229
KTNTTTHEVLGVMT DTQIC FDTPGLM+N GY +KD+K RVESAWS+V+L++VLMV+
Sbjct: 175 KTNTTTHEVLGVMTDGDTQICFFDTPGLMVNNRGYPYKDMKTRVESAWSSVDLYDVLMVI 234
Query: 230 FDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGY 289
FDVHRHLT PDSRV+ LI+ MG QA PKQKRVLCMNK+DLV KKKDLLKV E+FK LPGY
Sbjct: 235 FDVHRHLTRPDSRVVGLIKCMGAQANPKQKRVLCMNKIDLVEKKKDLLKVVEEFKDLPGY 294
Query: 290 ERIFMTSGLKGAGLKALTQYLMEQ 313
+R FM SGLKG+G+K L QYLMEQ
Sbjct: 295 DRHFMISGLKGSGVKHLNQYLMEQ 318
>gi|297851576|ref|XP_002893669.1| GTP-binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339511|gb|EFH69928.1| GTP-binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 435
Score = 364 bits (934), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 186/328 (56%), Positives = 236/328 (71%), Gaps = 18/328 (5%)
Query: 1 MKALRALRTLAPFAEK--PNKPRLNPLFIHRFYSAQPQQTD----NETENDCDSVFDSSY 54
MKA R+LR L + P+K F+ RFYSAQP + NE DSVFDSS
Sbjct: 1 MKAFRSLRILISISRTTTPHKSHQAQNFLRRFYSAQPNLDEPTSVNEDGTSSDSVFDSSQ 60
Query: 55 FRIPTIDDPQNNNAAKKQEPTWDEKYRERTDRIVFGEEAQKGKLRIFQE-----EEEERK 109
+ I+D ++ K +E TWD+ YRER ++ FG +KGKL++ +E ++E+
Sbjct: 61 Y---PIEDSHGDSVKKPKEATWDKGYRERVNKAFFGNLTEKGKLKVAEEVSSEDDDEDNI 117
Query: 110 HRALAKALLQAALERQEEEEE----EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVA 165
R+ A + +EE EV+EEDQKS+ VGIIG PNAGKSS+ N+MVGTKVA
Sbjct: 118 DRSRILAKALLEAALESPDEELGEGEVREEDQKSLNVGIIGPPNAGKSSLTNFMVGTKVA 177
Query: 166 AVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEV 225
A SRKTNTTTHEVLGV+TK DTQ+C FDTPGLML KSGY +KD+K RV++AW++V+LF+V
Sbjct: 178 AASRKTNTTTHEVLGVLTKGDTQVCFFDTPGLMLKKSGYGYKDIKSRVQNAWTSVDLFDV 237
Query: 226 LMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKH 285
L+V+FDVHRHL SPDSRV+RLI+ MG++ PKQKR+LCMNKVDLV KKKDLLKVAE+F+
Sbjct: 238 LIVMFDVHRHLMSPDSRVVRLIKYMGEEENPKQKRILCMNKVDLVEKKKDLLKVAEEFQD 297
Query: 286 LPGYERIFMTSGLKGAGLKALTQYLMEQ 313
LP YER FM SGLKG+G+K L+QYLM+Q
Sbjct: 298 LPAYERYFMISGLKGSGVKDLSQYLMDQ 325
>gi|6015115|sp|O82626.1|ERG_ANTMA RecName: Full=GTP-binding protein ERG
gi|3676069|emb|CAA76925.1| ERG protein [Antirrhinum majus]
Length = 423
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 192/321 (59%), Positives = 237/321 (73%), Gaps = 16/321 (4%)
Query: 1 MKALRALRTLAPFAEKPNKPRLNPLFIHRFYSAQPQQTDNETE-------NDCDSVFDSS 53
MKA+RA L P + +++HRFYSAQPQ TD+E + D+VFDSS
Sbjct: 1 MKAVRAALRLRPLTNSIS----TSVYLHRFYSAQPQHTDDEHHPKPEELLHQSDAVFDSS 56
Query: 54 YFRIPTIDDPQNNNAAKKQEPTWDEKYRERTDRIVFGEEAQKGKLRIFQEEEEER-KHRA 112
+F + D N A+ + TWDE+YR+R VF E+ +I + +EE++ K A
Sbjct: 57 HFDL----DLNNLAASGAETTTWDERYRDRVKSRVFDEDDTSSYSKILKRDEEKKYKSAA 112
Query: 113 LAKALLQAALERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTN 172
LAK+LL+AAL+ +E E EVKEEDQKS++VGIIGAPNAGKS++ NY+VGTKV+AVSRKTN
Sbjct: 113 LAKSLLEAALDDEEVEVGEVKEEDQKSLSVGIIGAPNAGKSALTNYIVGTKVSAVSRKTN 172
Query: 173 TTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDV 232
TTTHEVLGV+TK DTQIC FDTPGLML KSG + D+KVR ES WS++ L++VL+V+FDV
Sbjct: 173 TTTHEVLGVLTKRDTQICFFDTPGLMLKKSGIPYNDIKVRNESGWSSITLYDVLIVIFDV 232
Query: 233 HRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERI 292
HRHLT PDSRV+RLIER+G + QKRVLCMNKVDLVTKK DL+KVA++FK LPGYER
Sbjct: 233 HRHLTRPDSRVVRLIERVGSVSSTSQKRVLCMNKVDLVTKKNDLVKVAKEFKDLPGYERH 292
Query: 293 FMTSGLKGAGLKALTQYLMEQ 313
FM SGLKG GLK L QYL EQ
Sbjct: 293 FMVSGLKGYGLKDLAQYLTEQ 313
>gi|356519381|ref|XP_003528351.1| PREDICTED: GTP-binding protein ERG-like [Glycine max]
Length = 415
Score = 357 bits (916), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 198/320 (61%), Positives = 243/320 (75%), Gaps = 26/320 (8%)
Query: 4 LRALRTLAPFAEKPNKPRLNPLFIHR-FYSAQPQ-QTDNETENDCDSVFDSSYFRI---P 58
++ALRTL P P + R F+SAQPQ D+ T++ SVFDSS++ + P
Sbjct: 1 MKALRTLRRTLYSPT-----PATVFRAFFSAQPQPHHDDPTDS---SVFDSSHYALEAEP 52
Query: 59 TIDDPQNNNAAKKQEPTWDEKYRERTDRIVFGEEAQKGKLRIFQEEEEERKHRALAKALL 118
T+ + +PTWDEKYR R DR+VFGEE KGKLR+ +EE+E R+ L
Sbjct: 53 TL--------KPEPKPTWDEKYRARADRVVFGEEGPKGKLRVKEEEDERRRRALAKALLE 104
Query: 119 QAALERQEEEEEE-----VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNT 173
A E ++EEEE VKE+DQKS++VGIIGAPNAGKS++ NYMVGTKVAAVSRKTNT
Sbjct: 105 AAMDEGEDEEEEGKGAGLVKEDDQKSLSVGIIGAPNAGKSALTNYMVGTKVAAVSRKTNT 164
Query: 174 TTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH 233
TTHEV+GV+TK DTQIC FDTPGLMLN G+ ++DVKVRVESAWS+VNL+EVL+V+FDVH
Sbjct: 165 TTHEVVGVLTKGDTQICFFDTPGLMLNCGGFPYRDVKVRVESAWSSVNLYEVLIVIFDVH 224
Query: 234 RHLTSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIF 293
RH+T PDSRVI+LI+RMG ++ P Q+R+LCMNK+DLV KKKDLLKVAE+FK LPGYER F
Sbjct: 225 RHITRPDSRVIQLIKRMGARSIPNQRRILCMNKIDLVEKKKDLLKVAEEFKDLPGYERYF 284
Query: 294 MTSGLKGAGLKALTQYLMEQ 313
M SGLKG+G+K LTQYLMEQ
Sbjct: 285 MISGLKGSGVKDLTQYLMEQ 304
>gi|15221574|ref|NP_174383.1| GTP-binding protein ERG [Arabidopsis thaliana]
gi|11467944|sp|O82653.2|ERG_ARATH RecName: Full=GTP-binding protein ERG
gi|9755380|gb|AAF98187.1|AC000107_10 F17F8.15 [Arabidopsis thaliana]
gi|50253492|gb|AAT71948.1| At1g30960 [Arabidopsis thaliana]
gi|53850539|gb|AAU95446.1| At1g30960 [Arabidopsis thaliana]
gi|332193176|gb|AEE31297.1| GTP-binding protein ERG [Arabidopsis thaliana]
Length = 437
Score = 343 bits (881), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 182/327 (55%), Positives = 232/327 (70%), Gaps = 14/327 (4%)
Query: 1 MKALRALRTLAPFAEK-----PNKPRLNPLFIHRFYSAQPQQTDNETENDCDSVFDSSYF 55
MKA R+LR L + P P F+ RFYSAQP + + N+ S DS +
Sbjct: 1 MKAFRSLRILISISRTTTKTTPRNPHQAQNFLRRFYSAQPNLDEPTSINEDGSSSDSVFD 60
Query: 56 RIPT-IDDPQNNNAAKKQEPTWDEKYRERTDRIVFGEEAQKGKLRIFQEEEEERKHRALA 114
IDD ++ K +E TWD+ YRER ++ FG +KGK+++ +EE E ++
Sbjct: 61 SSQYPIDDSNVDSVKKPKEATWDKGYRERVNKAFFGNLTEKGKVKVAEEESSEDDEDSVD 120
Query: 115 KALLQAALER--------QEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAA 166
++ + A +E E EV+EEDQKS+ VGIIG PNAGKSS+ N+MVGTKVAA
Sbjct: 121 RSRILAKALLEAALESPDEELGEGEVREEDQKSLNVGIIGPPNAGKSSLTNFMVGTKVAA 180
Query: 167 VSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVL 226
SRKTNTTTHEVLGV+TK DTQ+C FDTPGLML KSGY +KD+K RV++AW++V+LF+VL
Sbjct: 181 ASRKTNTTTHEVLGVLTKGDTQVCFFDTPGLMLKKSGYGYKDIKARVQNAWTSVDLFDVL 240
Query: 227 MVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHL 286
+V+FDVHRHL SPDSRV+RLI+ MG++ PKQKRVLCMNKVDLV KKKDLLKVAE+F+ L
Sbjct: 241 IVMFDVHRHLMSPDSRVVRLIKYMGEEENPKQKRVLCMNKVDLVEKKKDLLKVAEEFQDL 300
Query: 287 PGYERIFMTSGLKGAGLKALTQYLMEQ 313
P YER FM SGLKG+G+K L+QYLM+Q
Sbjct: 301 PAYERYFMISGLKGSGVKDLSQYLMDQ 327
>gi|357483467|ref|XP_003612020.1| GTP-binding protein ERG [Medicago truncatula]
gi|355513355|gb|AES94978.1| GTP-binding protein ERG [Medicago truncatula]
Length = 469
Score = 340 bits (872), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 197/370 (53%), Positives = 254/370 (68%), Gaps = 68/370 (18%)
Query: 1 MKALRALRTLAPFAEKPNKPRLNPLFIHRFYSAQP--QQTDNETENDCDSVFDSSYFRIP 58
MK+LR + P+ P++ F+SA+P + D + E+ D+ FDSS++ IP
Sbjct: 1 MKSLRIFKNT--LYSTPS-PKITTTVFRAFFSAEPLTPEPDPQPEHS-DATFDSSHYEIP 56
Query: 59 TIDDPQNNNAAKKQEPTWDEKYRERTDRIVFGEEAQKGKLRIFQEEEEERKHRALAKALL 118
+ NN +K + +W++KYR+RTD++VFG+E KG+++ F+EEEEERK +AL KALL
Sbjct: 57 IL-----NNNDEKPKVSWNKKYRDRTDKLVFGDEP-KGRIK-FKEEEEERKTKALEKALL 109
Query: 119 QAALERQEEEEEE-------VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKT 171
+AAL + EEEEEE V EEDQKS++VGIIGAPNAGKSS+ NYMVGTKVAAVSRKT
Sbjct: 110 EAALSKPEEEEEEEDEDVGVVNEEDQKSLSVGIIGAPNAGKSSLTNYMVGTKVAAVSRKT 169
Query: 172 NTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFD 231
NTTTHEV+GV+TK DTQIC FDTPGL+LN SG+ +KD K RVESAWS+VNL+EVL+V+FD
Sbjct: 170 NTTTHEVVGVLTKGDTQICFFDTPGLVLNCSGFPYKDAKARVESAWSSVNLYEVLIVIFD 229
Query: 232 VHRHLT------------------------------------------------SPDSRV 243
VHRH+T PDSRV
Sbjct: 230 VHRHITRTIEARSRCSGTSLCCGEMRCVRRRERTGCREDIRSVIPFRFLTFHQYRPDSRV 289
Query: 244 IRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGL 303
++LI+RMG+++ P QKRVLCMNK+DLV KKKDL KVAE+F++LPG+ER FM SG+KGAG+
Sbjct: 290 VKLIKRMGERSIPNQKRVLCMNKIDLVEKKKDLTKVAEEFENLPGFERRFMISGMKGAGV 349
Query: 304 KALTQYLMEQ 313
K LTQ+LMEQ
Sbjct: 350 KDLTQFLMEQ 359
>gi|242078515|ref|XP_002444026.1| hypothetical protein SORBIDRAFT_07g006070 [Sorghum bicolor]
gi|241940376|gb|EES13521.1| hypothetical protein SORBIDRAFT_07g006070 [Sorghum bicolor]
Length = 435
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 172/322 (53%), Positives = 225/322 (69%), Gaps = 15/322 (4%)
Query: 1 MKALRALRTLA--PFAEKPNKPRLNPLFIHRFYSAQPQQTDNETENDCDSVFDSSYFRIP 58
++A+R L+TL+ P A P RL L ++ + D+ FDS+ + +P
Sbjct: 5 LQAVRPLQTLSLNPSAGTPTPLRL--LSSSSAAASSDSDSAPAPVPAADADFDSAEYALP 62
Query: 59 TIDDPQ----NNNAAKKQEPTWDEKYRERTDRIVFGEEAQKGKLRIFQEEEEERKHRALA 114
T NN A ++ +D R R D +FG KG EEE+E + R +A
Sbjct: 63 TPGPAPSRKINNPVAATRKLRFDPSLRARADEALFG----KGMGAAAVEEEDEDRSRDVA 118
Query: 115 KALLQAALERQEEEEE---EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKT 171
ALL AA+E +E+EE EV++EDQ S++VGI+GAPNAGKSS+ N MVGTKVAAVSRKT
Sbjct: 119 LALLDAAMEPPDEDEEDFGEVRQEDQMSLSVGIVGAPNAGKSSLTNTMVGTKVAAVSRKT 178
Query: 172 NTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFD 231
NTTTHE+LGV+TK +TQIC FDTPGLML G+ ++DV VRVESAWS++NL+++L+V+FD
Sbjct: 179 NTTTHEILGVLTKGNTQICFFDTPGLMLGHHGFPYRDVTVRVESAWSSINLYDLLIVMFD 238
Query: 232 VHRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYER 291
V+RHLT PDSRVI+LI+R+G + P Q+R+LCMNKVDLV KKDLLKVA++F+ LPGYER
Sbjct: 239 VNRHLTLPDSRVIKLIKRLGMEVNPNQRRILCMNKVDLVKDKKDLLKVAKEFEDLPGYER 298
Query: 292 IFMTSGLKGAGLKALTQYLMEQ 313
FM SGLKG G+K L QYLM+Q
Sbjct: 299 YFMVSGLKGKGVKDLVQYLMDQ 320
>gi|3676071|emb|CAA76979.1| ERG protein [Arabidopsis thaliana]
Length = 375
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 167/296 (56%), Positives = 215/296 (72%), Gaps = 13/296 (4%)
Query: 27 IHRFYSAQPQQTDNETENDCDSVFDSSYFRIPT-IDDPQNNNAAKKQEPTWDEKYRERTD 85
+ RFYSAQ + + N+ S DS + IDD ++ K +E TWD+ YRER +
Sbjct: 1 LRRFYSAQANLDEPTSINEDGSSSDSVFDSSQYPIDDSNVDSVKKPKEATWDKGYRERVN 60
Query: 86 RIVFGEEAQKGKLRIFQEEEEERKHRALAKALLQAALER--------QEEEEEEVKEEDQ 137
+ FG +KGK+++ +EE E ++ ++ + A +E E EV+EEDQ
Sbjct: 61 KAFFGNLTEKGKVKVAEEESSEDDEDSVDRSRILAKALLEAALESPDEELGEGEVREEDQ 120
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS+ VGIIG PNAGKSS+ N+MVGTKVAA SRKTNTTTHEVLGV+TK DTQ+C FDTPGL
Sbjct: 121 KSLNVGIIGPPNAGKSSLTNFMVGTKVAAASRKTNTTTHEVLGVLTKGDTQVCFFDTPGL 180
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
ML KSGY +KD+K RV++AW++V+LF+VL+V+FDVHRHL RV+RLI+ MG++ PK
Sbjct: 181 MLKKSGYGYKDIKARVQNAWTSVDLFDVLIVMFDVHRHLM----RVVRLIKYMGEEENPK 236
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
QKRVLCMNKVDLV KKKDLLKVAE+F+ LP YER FM SGLKG+G+K L+QYLM+Q
Sbjct: 237 QKRVLCMNKVDLVEKKKDLLKVAEEFQDLPAYERYFMISGLKGSGVKDLSQYLMDQ 292
>gi|413917060|gb|AFW56992.1| hypothetical protein ZEAMMB73_674370 [Zea mays]
gi|413917061|gb|AFW56993.1| hypothetical protein ZEAMMB73_674370 [Zea mays]
gi|413917062|gb|AFW56994.1| hypothetical protein ZEAMMB73_674370 [Zea mays]
Length = 437
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/271 (59%), Positives = 201/271 (74%), Gaps = 11/271 (4%)
Query: 50 FDSSYFRIPTIDDPQ----NNNAAKKQEPTWDEKYRERTDRIVFGEEAQKGKLRIFQEEE 105
FDSS + +PT NN A ++ +D R R D +FG KG EE+
Sbjct: 56 FDSSDYALPTPGPAPSRKINNPVAALRKLRFDPSLRARADEALFG----KGLGAAAVEEQ 111
Query: 106 EERKHRALAKALLQAALERQEEEEE---EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGT 162
+E R +A ALL AALE +E+E+ EVKEEDQ S++VGI+GAPNAGKSS+ N MVGT
Sbjct: 112 DEEHSRDVALALLDAALEPPDEDEDDLGEVKEEDQMSLSVGIVGAPNAGKSSLTNTMVGT 171
Query: 163 KVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNL 222
KVAAVSRKTNTTTHE+LGV+TK +TQIC FDTPGLML G+ ++DV VRVESAWS++NL
Sbjct: 172 KVAAVSRKTNTTTHEILGVLTKGNTQICFFDTPGLMLGHHGFPYRDVTVRVESAWSSINL 231
Query: 223 FEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQ 282
+++L+V+FDV+RHL PDSRVI+LI+R G + P Q+R+LCMNKVDLV KKDLLKVA++
Sbjct: 232 YDLLIVMFDVNRHLNLPDSRVIKLIKRFGTEVNPNQRRILCMNKVDLVEDKKDLLKVAKE 291
Query: 283 FKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
F+ LPGYER FM SGLKG G+K L QYLM+Q
Sbjct: 292 FEDLPGYERYFMVSGLKGKGVKDLIQYLMDQ 322
>gi|224030001|gb|ACN34076.1| unknown [Zea mays]
gi|413921066|gb|AFW60998.1| hypothetical protein ZEAMMB73_697996 [Zea mays]
gi|413921067|gb|AFW60999.1| hypothetical protein ZEAMMB73_697996 [Zea mays]
Length = 439
Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 157/252 (62%), Positives = 196/252 (77%), Gaps = 7/252 (2%)
Query: 65 NNNAAKKQEPTWDEKYRERTDRIVFGEEAQKGKLRIFQEEEEERKHRALAKALLQAALER 124
NN AA ++ +D R R D +FG KG +EE+E + R +A ALL AALE
Sbjct: 77 NNPAAALRKVRFDPSLRARADEALFG----KGLGAAAVDEEDEDRSRDVALALLDAALEA 132
Query: 125 QEEEEE---EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGV 181
+E+EE EV+EEDQ S++VGI+GAPNAGKSS+ N MVGTKVAAVSRKTNTTTHE+LGV
Sbjct: 133 PDEDEEDLGEVREEDQMSLSVGIVGAPNAGKSSLTNTMVGTKVAAVSRKTNTTTHEILGV 192
Query: 182 MTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDS 241
+TK +TQIC FDTPGLML G+ ++DV VRVESAWS++NL+++L+V+FDV+RHL PDS
Sbjct: 193 LTKGNTQICFFDTPGLMLGHHGFPYRDVTVRVESAWSSINLYDLLIVMFDVNRHLNLPDS 252
Query: 242 RVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGA 301
RVI+LI+R+G + P Q+R+LCMNKVDLV KKDLLKVA++F+ LPGYER FM SGLKG
Sbjct: 253 RVIKLIKRLGTEVNPNQRRILCMNKVDLVEDKKDLLKVAKEFEDLPGYERYFMVSGLKGK 312
Query: 302 GLKALTQYLMEQ 313
G+K L QYLMEQ
Sbjct: 313 GVKDLVQYLMEQ 324
>gi|357145161|ref|XP_003573547.1| PREDICTED: GTP-binding protein ERG-like [Brachypodium distachyon]
Length = 429
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 152/268 (56%), Positives = 194/268 (72%), Gaps = 8/268 (2%)
Query: 50 FDSSYFRIPTIDDPQ----NNNAAKKQEPTWDEKYRERTDRIVFGEEAQKGKLRIFQEEE 105
FDS+ F + T DP + + ++ +D R R D +FGE + +EE
Sbjct: 51 FDSADFSL-TTPDPTPVRAHTPVSALRKLRFDPSLRARADEALFGE---TNAVDAVEEER 106
Query: 106 EERKHRALAKALLQAALERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVA 165
AL +A L+ E +EE EV+EEDQ S++VGI+GAPNAGKSS+ N +VG+KVA
Sbjct: 107 SREVALALLEAALEPPDEDEEEGPGEVREEDQMSLSVGIVGAPNAGKSSLTNTVVGSKVA 166
Query: 166 AVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEV 225
AVSRKTNTTTHE+LGV+TK TQIC FDTPGLML G+ H+DV VRVESAWS+VNL+++
Sbjct: 167 AVSRKTNTTTHEILGVLTKGKTQICFFDTPGLMLGHHGFPHRDVTVRVESAWSSVNLYDL 226
Query: 226 LMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKH 285
L+V+FDV+RHL PDSRVI+LI+R+G + P QKR+LCMNKVDLV KKDLLKVA++F+
Sbjct: 227 LIVMFDVNRHLKMPDSRVIKLIKRLGAEVNPNQKRILCMNKVDLVEDKKDLLKVAKEFED 286
Query: 286 LPGYERIFMTSGLKGAGLKALTQYLMEQ 313
LPG+ER FM SGLKG G+K L QYLM+Q
Sbjct: 287 LPGFERYFMVSGLKGKGVKDLVQYLMDQ 314
>gi|45735814|dbj|BAD12850.1| putative GTP-binding protein ERG [Oryza sativa Japonica Group]
Length = 437
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 140/238 (58%), Positives = 177/238 (74%), Gaps = 3/238 (1%)
Query: 76 WDEKYRERTDRIVFGEEAQKGKLRIFQEEEEERKHRALAKALLQAALERQEEEEEEVKEE 135
+D R R D +FG+E +G + EEE R+ + + EV+EE
Sbjct: 88 FDPSLRARADEALFGKE--RGGVDDAVEEERSREVALALLEAALEPPD-DDLGPGEVREE 144
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
DQ S++VGI+GAPNAGKSS+ N MVGTKVAAVSRKTNTTTHE+LGV+TK TQIC FDTP
Sbjct: 145 DQMSLSVGIVGAPNAGKSSLTNTMVGTKVAAVSRKTNTTTHEILGVLTKGITQICFFDTP 204
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
GLML G H+DV VRVESAWS++NL+++L+V+FDV+RHL +PD+RV++LI+R+G +
Sbjct: 205 GLMLGHHGLPHRDVTVRVESAWSSINLYDLLIVLFDVNRHLKTPDTRVVKLIKRLGAEVN 264
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
P QKR+LCMNKVDLV KKDLLKVA++F+ LP YER FM SGLKG G+K L Q+LMEQ
Sbjct: 265 PNQKRILCMNKVDLVEDKKDLLKVAKEFEDLPAYERYFMVSGLKGKGVKDLVQFLMEQ 322
>gi|218200669|gb|EEC83096.1| hypothetical protein OsI_28232 [Oryza sativa Indica Group]
Length = 437
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 140/238 (58%), Positives = 177/238 (74%), Gaps = 3/238 (1%)
Query: 76 WDEKYRERTDRIVFGEEAQKGKLRIFQEEEEERKHRALAKALLQAALERQEEEEEEVKEE 135
+D R R D +FG+E +G + EEE R+ + + EV+EE
Sbjct: 88 FDPSLRARADEALFGKE--RGGVDDAVEEERSREVALALLEAALEPPD-DDLGPGEVREE 144
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
DQ S++VGI+GAPNAGKSS+ N MVGTKVAAVSRKTNTTTHE+LGV+TK TQIC FDTP
Sbjct: 145 DQMSLSVGIVGAPNAGKSSLTNTMVGTKVAAVSRKTNTTTHEILGVLTKGITQICFFDTP 204
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
GLML G H+DV VRVESAWS++NL+++L+V+FDV+RHL +PD+RV++LI+R+G +
Sbjct: 205 GLMLGHHGLPHRDVTVRVESAWSSINLYDLLIVLFDVNRHLKTPDTRVVKLIKRLGAEVN 264
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
P QKR+LCMNKVDLV KKDLLKVA++F+ LP YER FM SGLKG G+K L Q+LMEQ
Sbjct: 265 PNQKRILCMNKVDLVEDKKDLLKVAKEFEDLPAYERYFMVSGLKGKGVKDLVQFLMEQ 322
>gi|413917063|gb|AFW56995.1| hypothetical protein ZEAMMB73_674370 [Zea mays]
Length = 291
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 123/175 (70%), Positives = 151/175 (86%)
Query: 139 SVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLM 198
S++VGI+GAPNAGKSS+ N MVGTKVAAVSRKTNTTTHE+LGV+TK +TQIC FDTPGLM
Sbjct: 2 SLSVGIVGAPNAGKSSLTNTMVGTKVAAVSRKTNTTTHEILGVLTKGNTQICFFDTPGLM 61
Query: 199 LNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQ 258
L G+ ++DV VRVESAWS++NL+++L+V+FDV+RHL PDSRVI+LI+R G + P Q
Sbjct: 62 LGHHGFPYRDVTVRVESAWSSINLYDLLIVMFDVNRHLNLPDSRVIKLIKRFGTEVNPNQ 121
Query: 259 KRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
+R+LCMNKVDLV KKDLLKVA++F+ LPGYER FM SGLKG G+K L QYLM+Q
Sbjct: 122 RRILCMNKVDLVEDKKDLLKVAKEFEDLPGYERYFMVSGLKGKGVKDLIQYLMDQ 176
>gi|222640100|gb|EEE68232.1| hypothetical protein OsJ_26417 [Oryza sativa Japonica Group]
Length = 365
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 125/216 (57%), Positives = 160/216 (74%), Gaps = 3/216 (1%)
Query: 76 WDEKYRERTDRIVFGEEAQKGKLRIFQEEEEERKHRALAKALLQAALERQEEEEEEVKEE 135
+D R R D +FG+E +G + EEE R+ + + EV+EE
Sbjct: 88 FDPSLRARADEALFGKE--RGGVDDAVEEERSREVALALLEAALEPPD-DDLGPGEVREE 144
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
DQ S++VGI+GAPNAGKSS+ N MVGTKVAAVSRKTNTTTHE+LGV+TK TQIC FDTP
Sbjct: 145 DQMSLSVGIVGAPNAGKSSLTNTMVGTKVAAVSRKTNTTTHEILGVLTKGITQICFFDTP 204
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
GLML G H+DV VRVESAWS++NL+++L+V+FDV+RHL +PD+RV++LI+R+G +
Sbjct: 205 GLMLGHHGLPHRDVTVRVESAWSSINLYDLLIVLFDVNRHLKTPDTRVVKLIKRLGAEVN 264
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYER 291
P QKR+LCMNKVDLV KKDLLKVA++F+ LP YER
Sbjct: 265 PNQKRILCMNKVDLVEDKKDLLKVAKEFEDLPAYER 300
>gi|302766117|ref|XP_002966479.1| hypothetical protein SELMODRAFT_64762 [Selaginella moellendorffii]
gi|300165899|gb|EFJ32506.1| hypothetical protein SELMODRAFT_64762 [Selaginella moellendorffii]
Length = 310
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 157/201 (78%), Gaps = 2/201 (0%)
Query: 114 AKALLQAALERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNT 173
AKALL AA++ + + V ++Q SV VGIIGAPNAGKSS++N+MVGTKV+AVSRKTNT
Sbjct: 1 AKALL-AAIDDRSADIGSVSLDEQMSVRVGIIGAPNAGKSSLLNFMVGTKVSAVSRKTNT 59
Query: 174 TTHEVLGVMTKADTQICIFDTPGLMLNKSGYS-HKDVKVRVESAWSAVNLFEVLMVVFDV 232
T +E+LGV+T+ DTQ+ +DTPGLM+ G + +DVK RV+SAW EVL+V+ D
Sbjct: 60 TRNEILGVLTENDTQVLFYDTPGLMMRWKGQAVRRDVKSRVQSAWMVTGHCEVLIVLVDA 119
Query: 233 HRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERI 292
HR + PD RV +LIE++G++ PKQKR+LC+NKVDL+ +K++L+ +A++F LPGY+R+
Sbjct: 120 HRQIERPDQRVRKLIEKLGEKKDPKQKRILCLNKVDLIRQKRELVPLAQEFGSLPGYDRV 179
Query: 293 FMTSGLKGAGLKALTQYLMEQ 313
FM SGL+G+G++ L +YL+E+
Sbjct: 180 FMISGLRGSGVRHLKEYLLEK 200
>gi|302800566|ref|XP_002982040.1| hypothetical protein SELMODRAFT_115965 [Selaginella moellendorffii]
gi|300150056|gb|EFJ16708.1| hypothetical protein SELMODRAFT_115965 [Selaginella moellendorffii]
Length = 387
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 156/200 (78%), Gaps = 2/200 (1%)
Query: 115 KALLQAALERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTT 174
KALL AA++ + + V ++Q SV VGIIGAPNAGKSS++N++VGTKV+AVSRKTNTT
Sbjct: 61 KALL-AAIDDRSADIGSVSLDEQMSVRVGIIGAPNAGKSSLLNFLVGTKVSAVSRKTNTT 119
Query: 175 THEVLGVMTKADTQICIFDTPGLMLNKSGYS-HKDVKVRVESAWSAVNLFEVLMVVFDVH 233
+E+LGV+T+ DTQ+ +DTPGLM+ G + +DVK RV+SAW EVL+V+ D H
Sbjct: 120 RNEILGVLTENDTQVLFYDTPGLMMRWKGQAVRRDVKSRVQSAWMVTGHCEVLIVLVDAH 179
Query: 234 RHLTSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIF 293
R + PD RV +LIE++G++ PKQKR+LC+NKVDL+ +K++L+ +A++F LPGY+R+F
Sbjct: 180 RQIERPDQRVRKLIEKLGEKKDPKQKRILCLNKVDLIRQKRELVPLAQEFGSLPGYDRVF 239
Query: 294 MTSGLKGAGLKALTQYLMEQ 313
M SGL+G+G++ L +YL+E+
Sbjct: 240 MISGLRGSGVRHLKEYLLEK 259
>gi|168062875|ref|XP_001783402.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665100|gb|EDQ51796.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 312
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 143/203 (70%), Gaps = 3/203 (1%)
Query: 114 AKALLQAALERQEEEEEE--VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKT 171
A LL+AAL+ EEEE+ V EEDQ+S+ VG++G+PNAGKS++ N++VG+KV+AVSRKT
Sbjct: 1 AMGLLRAALDEASEEEEDFAVSEEDQRSLRVGVVGSPNAGKSTLTNHLVGSKVSAVSRKT 60
Query: 172 NTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHK-DVKVRVESAWSAVNLFEVLMVVF 230
NTT E +G++TK D+Q+ FDTPGL ++ G+ + D + RV SAW L E L+V+
Sbjct: 61 NTTHKEHMGILTKGDSQLIFFDTPGLTVDVRGHPLRTDNRNRVRSAWQTAELCEALIVLV 120
Query: 231 DVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYE 290
D HR + PD RV RL+E++G + QK++LC NKVDLV K+ LL +AE++ + P +
Sbjct: 121 DAHRQIERPDKRVTRLVEKLGNEEVLSQKKILCFNKVDLVHPKRLLLPLAEEYGNYPAFN 180
Query: 291 RIFMTSGLKGAGLKALTQYLMEQ 313
FM S L G G+ AL QYL++Q
Sbjct: 181 STFMISALTGDGVDALQQYLLDQ 203
>gi|384250075|gb|EIE23555.1| GTP-binding protein Era [Coccomyxa subellipsoidea C-169]
Length = 547
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 108/189 (57%), Gaps = 6/189 (3%)
Query: 130 EEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQI 189
E V DQ+ + GI+G PN+GKS++ N +VG KV+AVS KTNTT LG T+ Q+
Sbjct: 245 ETVPINDQRLLQAGIVGVPNSGKSTLTNALVGHKVSAVSSKTNTTDATRLGAFTEGPAQV 304
Query: 190 CIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIER 249
++DTPG++ + ++ K RV SAW + E+L+ + D HR +T PD RV++L+E
Sbjct: 305 ALYDTPGVVTTRFLRGNQHAK-RVRSAWGTASDCEMLLFIVDAHRQITEPDERVLQLVEE 363
Query: 250 MGKQAPPKQK---RVLCMNKVDLVTK--KKDLLKVAEQFKHLPGYERIFMTSGLKGAGLK 304
+ P +L +NK+D ++K + L ++ E + ++ F S G G+
Sbjct: 364 LAAGPLPSWDPPPALLLLNKIDRLSKEERPHLSRLGEHLNSIYPFQDTFSISAKHGVGMT 423
Query: 305 ALTQYLMEQ 313
AL QYL+ +
Sbjct: 424 ALRQYLLSR 432
>gi|303278266|ref|XP_003058426.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459586|gb|EEH56881.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 322
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 109/194 (56%), Gaps = 17/194 (8%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E QK++ VGI+G PNAGKS + N + G++V+AVS KTNTT E L +TK +TQ+ + D
Sbjct: 1 EAQKTITVGIVGVPNAGKSQLTNTLAGSQVSAVSPKTNTTRIETLATITKRETQVILVDL 60
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLI------- 247
PG ++ + Y + + +V SAWSA + L+ + D HR L+ PD RV+RLI
Sbjct: 61 PG-VVGREHYRNGVHEKKVSSAWSAAADCDALVFIVDAHRQLSRPDPRVVRLIARARESL 119
Query: 248 -------ERMGKQAPPKQKRVLCMNKVDLVTK-KKDLLK-VAEQFKHLPGYERIFMTSGL 298
E++ + L +NK+DL ++D +K +A Q L + R+F S
Sbjct: 120 DAMKTEAEKLEGDGALRVPSFLALNKLDLFEPWERDRVKALARQLSKLHDFARVFPISAK 179
Query: 299 KGAGLKALTQYLME 312
+G G AL + L+E
Sbjct: 180 RGKGTDALLRGLIE 193
>gi|413921064|gb|AFW60996.1| hypothetical protein ZEAMMB73_697996 [Zea mays]
Length = 205
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/132 (57%), Positives = 94/132 (71%), Gaps = 8/132 (6%)
Query: 65 NNNAAKKQEPTWDEKYRERTDRIVFGEEAQKGKLRIFQEEEEERKHRALAKALLQAALER 124
NN AA ++ +D R R D +FG KG +EE+E + R +A ALL AALE
Sbjct: 77 NNPAAALRKVRFDPSLRARADEALFG----KGLGAAAVDEEDEDRSRDVALALLDAALEA 132
Query: 125 QEEEEE---EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGV 181
+E+EE EV+EEDQ S++VGI+GAPNAGKSS+ N MVGTKVAAVSRKTNTTTHE+LGV
Sbjct: 133 PDEDEEDLGEVREEDQMSLSVGIVGAPNAGKSSLTNTMVGTKVAAVSRKTNTTTHEILGV 192
Query: 182 MTKADTQI-CIF 192
+TK +TQI C F
Sbjct: 193 LTKGNTQIVCRF 204
>gi|212721868|ref|NP_001131615.1| uncharacterized protein LOC100192967 [Zea mays]
gi|194692042|gb|ACF80105.1| unknown [Zea mays]
gi|413921065|gb|AFW60997.1| hypothetical protein ZEAMMB73_697996 [Zea mays]
Length = 213
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 95/138 (68%), Gaps = 7/138 (5%)
Query: 65 NNNAAKKQEPTWDEKYRERTDRIVFGEEAQKGKLRIFQEEEEERKHRALAKALLQAALER 124
NN AA ++ +D R R D +FG KG +EE+E + R +A ALL AALE
Sbjct: 77 NNPAAALRKVRFDPSLRARADEALFG----KGLGAAAVDEEDEDRSRDVALALLDAALEA 132
Query: 125 QEEEEE---EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGV 181
+E+EE EV+EEDQ S++VGI+GAPNAGKSS+ N MVGTKVAAVSRKTNTTTHE+LGV
Sbjct: 133 PDEDEEDLGEVREEDQMSLSVGIVGAPNAGKSSLTNTMVGTKVAAVSRKTNTTTHEILGV 192
Query: 182 MTKADTQICIFDTPGLML 199
+TK +TQI + G L
Sbjct: 193 LTKGNTQIGCHSSCGECL 210
>gi|307106708|gb|EFN54953.1| hypothetical protein CHLNCDRAFT_134713 [Chlorella variabilis]
Length = 396
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 113/201 (56%), Gaps = 10/201 (4%)
Query: 122 LERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGV 181
LE E +E V Q+ + VG++G PNAGKS+++N + G KV+AVS KTNTT LG
Sbjct: 84 LEAAEGTDEGVPVGQQRLLQVGVMGVPNAGKSTLVNVLAGFKVSAVSPKTNTTERPRLGA 143
Query: 182 MTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDS 241
T+ +Q+ ++DTPG +++K Y + + RV W+ ++L+++ D R L D
Sbjct: 144 FTEGPSQVVLYDTPG-VVDKLHYKNAAHRQRVRGTWAVAADCDLLLLLVDAARELQRADP 202
Query: 242 RVIRLIERMGKQA----PPKQK---RVLCMNKVDLVTK--KKDLLKVAEQFKHLPGYERI 292
RV RL+E A PP + VL +NK D + + + LL +A++ + L +E +
Sbjct: 203 RVHRLVEESASGARLGMPPGWRPPPGVLVLNKCDAIARPQRAGLLPLADKLRALRPFEDV 262
Query: 293 FMTSGLKGAGLKALTQYLMEQ 313
F S G GL L Q+L+++
Sbjct: 263 FFVSAKDGRGLPELRQFLLDR 283
>gi|308810845|ref|XP_003082731.1| Ras-like GTPase ERA (ISS) [Ostreococcus tauri]
gi|116061200|emb|CAL56588.1| Ras-like GTPase ERA (ISS) [Ostreococcus tauri]
Length = 327
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 104/189 (55%), Gaps = 14/189 (7%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
++ V ++GAPNAGKS++ N +VG V+AVSRKTNTT +G T D Q+ I D PG
Sbjct: 11 ERCARVALVGAPNAGKSALANALVGDTVSAVSRKTNTTRRRAIGCRTVGDAQVVIVDAPG 70
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIER------- 249
+ + + Y + +VE A+ + L +V D R L D+R++ ++ R
Sbjct: 71 V-VGREHYRNAAHGRKVEHAFETAAECDALALVVDARRQLERRDTRILDIVRRVREAMDE 129
Query: 250 MGKQAPPKQKRVLCMNKVDLVTK--KKDLLKVAEQFKHLPG----YERIFMTSGLKGAGL 303
+ + + VL +NKVD V K + L+K+ + F+ G ++R+F S L GAG
Sbjct: 130 IREDKGADARAVLVLNKVDDVPKELRAGLVKMVDDFQKAGGEGFKFDRVFPVSALTGAGT 189
Query: 304 KALTQYLME 312
+AL +YL++
Sbjct: 190 RALLEYLLD 198
>gi|412991221|emb|CCO16066.1| GTP-binding protein Era [Bathycoccus prasinos]
Length = 491
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 107/222 (48%), Gaps = 42/222 (18%)
Query: 129 EEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQ 188
EE V E QKS+ VGI+G PNAGKS ++N +VG KV+AVSRKTNTT E +G T+ DTQ
Sbjct: 146 EESVPIERQKSIRVGILGVPNAGKSELVNALVGAKVSAVSRKTNTTRMETIGTTTRDDTQ 205
Query: 189 ICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIE 248
+ D PG+ + Y ++ + +V S W+A + + ++ V D +R D RV I+
Sbjct: 206 VVFLDLPGI-VGPEHYRNRAHESKVTSGWAAASTCDAILFVVDANRQAKKADWRVRETID 264
Query: 249 RMGKQ----------------------------------APPKQKRVLCMNKVDLVTKKK 274
M +Q APP +L +NKVDL+ + K
Sbjct: 265 AMTEQMRKLRYEEFLFPEEDEDEEKDEENEKDDVVTNKAAPPPG--ILVLNKVDLMDRSK 322
Query: 275 DLLKVAEQFKHLP-----GYERIFMTSGLKGAGLKALTQYLM 311
++ E + L + + F S L G + L +L+
Sbjct: 323 RSEQLPELIQSLATDPKKTFSKAFPVSALHSVGTETLFNHLI 364
>gi|255079458|ref|XP_002503309.1| predicted protein [Micromonas sp. RCC299]
gi|226518575|gb|ACO64567.1| predicted protein [Micromonas sp. RCC299]
Length = 365
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 107/201 (53%), Gaps = 20/201 (9%)
Query: 127 EEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKAD 186
+ + V E DQ+ V VG++G PNAGKS ++N +VG ++ AVS KTNTT E LG +T+ D
Sbjct: 39 DPDATVPERDQRCVRVGVVGVPNAGKSQLVNTLVGAQICAVSAKTNTTRVETLGAVTRGD 98
Query: 187 TQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRL 246
Q + D PG ++ Y + +V SAW+A ++L+ + D +R PD RV+ L
Sbjct: 99 AQAVLLDLPG-VVGPEHYRNPTHATKVSSAWAAAAQCDLLLFIVDANRQARRPDPRVVDL 157
Query: 247 -------IERM------GKQAPPKQKRVLCMNKVDLVTKKKD---LLKVAEQFKHLPGYE 290
+ER+ G PP VL +NKVDL +D L +VA + +E
Sbjct: 158 LASARANLERLKYTEVTGLSMPPA---VLALNKVDLFRGAEDREALKRVARALAAVHPFE 214
Query: 291 RIFMTSGLKGAGLKALTQYLM 311
IF S KG G AL +L+
Sbjct: 215 DIFPISAAKGRGTDALLSHLL 235
>gi|144899861|emb|CAM76725.1| GTP-binding protein Era [Magnetospirillum gryphiswaldense MSR-1]
Length = 303
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 102/183 (55%), Gaps = 11/183 (6%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
EV E +++ V I+GAPNAGKS++ N +VGTKV+ VS K TT VLG++ Q+
Sbjct: 3 EVPEHEKRCGYVAIVGAPNAGKSTLTNGLVGTKVSIVSPKVQTTRFRVLGILMTGPAQVI 62
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM 250
+ DTPG+ K + V +AW + E++ ++ D HR L D+R I +
Sbjct: 63 LVDTPGIFQPKRRLD----RAMVAAAWHGASDAEIICLMVDAHRGLDD-DTRAI-----I 112
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K K++ +L +NKVD+V KK+ LL + + + +FM S LKG GL L++ L
Sbjct: 113 DKLKGAKREAILVLNKVDMV-KKERLLDLTARLHEEGIFTDVFMVSALKGDGLADLSKVL 171
Query: 311 MEQ 313
++
Sbjct: 172 SDR 174
>gi|426401911|ref|YP_007020883.1| GTP-binding protein Era [Candidatus Endolissoclinum patella L2]
gi|425858579|gb|AFX99615.1| GTP-binding protein Era [Candidatus Endolissoclinum patella L2]
Length = 293
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 99/169 (58%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ ++G PNAGKS++IN +V +KV+ VS+K TT + G+++ QI +FDTPG+ L K
Sbjct: 11 ITLLGPPNAGKSTLINRIVSSKVSIVSQKAQTTRTRLCGIVSDGQAQIILFDTPGIFLPK 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+V +E+AW+ ++L++V D H D +I++I + K + V
Sbjct: 71 RQID----RVMIEAAWAGAKDADLLVLVVDAHLGF---DKNIIQIIHGLNK---IHRNTV 120
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NKVD + K++ LL +A Q + +E+IFM S L G+G K L YL
Sbjct: 121 LALNKVDNI-KREKLLPLAAQLNEVFKFEKIFMISALTGSGCKDLRTYL 168
>gi|298291622|ref|YP_003693561.1| GTP-binding protein Era [Starkeya novella DSM 506]
gi|296928133|gb|ADH88942.1| GTP-binding protein Era [Starkeya novella DSM 506]
Length = 304
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 11/179 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D + V +IGAPNAGKS++ N +VGTKV+ VS K TT V G+ + TQI + DTP
Sbjct: 7 DTRCGFVALIGAPNAGKSTLTNALVGTKVSIVSHKVQTTRSLVRGIALEGTTQIILVDTP 66
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K + K V SAWS + ++++ D +T +I+ + A
Sbjct: 67 GIFAPK----RRLEKAMVRSAWSGAGDADAVVLLVDARAGMTEDVEAIIKGL------AD 116
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
K+ R + +NK+DLV K+ LL++A + L ++R+FM S G GLK L ++L +
Sbjct: 117 VKRPRAILLNKIDLV-KRDSLLELAAKVAELISFDRLFMVSAQNGDGLKELREWLAQTL 174
>gi|374292001|ref|YP_005039036.1| 16S rRNA-binding GTPase [Azospirillum lipoferum 4B]
gi|357423940|emb|CBS86803.1| 16S rRNA-binding GTPase [Azospirillum lipoferum 4B]
Length = 391
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 97/173 (56%), Gaps = 10/173 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ ++GAPNAGKS+++N M+G+KV+ VS K TT VLG+ + D Q+ DTPG+ K
Sbjct: 100 IALVGAPNAGKSTLLNAMIGSKVSIVSPKVQTTRTRVLGITIQGDAQMIFVDTPGIFKPK 159
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW +V+ V++DV R D+R I + R+ +Q ++ +
Sbjct: 160 RRLD----RAMVAAAWQGAEDADVIGVLYDVSRRSIDEDTRSI--VARLKEQG---REAI 210
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+DLV K+ LL +A+ F+ + IFM S G+ L Q+L ++
Sbjct: 211 LILNKIDLV-KRDVLLGIADAFRQEGIFSDIFMVSAFTEDGVADLKQFLADRL 262
>gi|407775063|ref|ZP_11122359.1| GTPase Era [Thalassospira profundimaris WP0211]
gi|407282011|gb|EKF07571.1| GTPase Era [Thalassospira profundimaris WP0211]
Length = 312
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 10/180 (5%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
Q+ V ++GAPNAGKS+++N +VGTKV+ VS K TT V G++ D QI DTPG
Sbjct: 17 QRCGFVALVGAPNAGKSTLLNQLVGTKVSIVSPKVQTTRTRVRGIVMTEDAQIVFIDTPG 76
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ K + V++AW+ + +++++V D +T D +I+ ++ ++A
Sbjct: 77 IFAPKRRLD----RAMVKAAWNGADDADLVVLVIDAGSGITDEDLAIIKTLKEQNRKA-- 130
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
+L +NKVD V+ K+ LL++++ + +FM S KGAG + L +L + D
Sbjct: 131 ----ILALNKVDKVSDKEKLLRLSQDLFAHEVFTDVFMISAKKGAGTQDLVNFLAAKMPD 186
>gi|254469267|ref|ZP_05082672.1| GTP-binding protein Era [Pseudovibrio sp. JE062]
gi|374331953|ref|YP_005082137.1| GTP-binding protein Era [Pseudovibrio sp. FO-BEG1]
gi|211961102|gb|EEA96297.1| GTP-binding protein Era [Pseudovibrio sp. JE062]
gi|359344741|gb|AEV38115.1| GTP-binding protein Era [Pseudovibrio sp. FO-BEG1]
Length = 320
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 101/180 (56%), Gaps = 11/180 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ ++ V +IGAPNAGKS+++N +VGTKV+ V+ K TT V GV + D+Q+ DT
Sbjct: 24 ENSRAGFVALIGAPNAGKSTLLNQLVGTKVSIVTHKVQTTRAIVRGVAIEDDSQVIFVDT 83
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ K + V++AW +V+ V+ D + + R++ +E +
Sbjct: 84 PGIFRPKRRLD----RAMVDTAWGGAKDADVVAVLIDAKKGINEAVERILNELEHI---- 135
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
K +VL +NK+D +TK++ LL++A + +++ FM S + G+G K + +Y EQ
Sbjct: 136 --KLPKVLILNKID-ITKREQLLELAAKANEYTKFDQTFMVSAINGSGTKDILKYFSEQM 192
>gi|145353386|ref|XP_001420995.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145357385|ref|XP_001422900.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581231|gb|ABO99288.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583144|gb|ABP01259.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 287
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 103/179 (57%), Gaps = 12/179 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
VG++GAPNAGKS++ +VG V+AVSRKTNTT LGV T D Q+ D PG+ + +
Sbjct: 1 VGVLGAPNAGKSALACALVGDAVSAVSRKTNTTRTRALGVRTVGDAQVVFVDAPGI-VGR 59
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIER----MGK-QAPP 256
Y + +VE A + + + L+ V D R L D RV+ + + +G+ +APP
Sbjct: 60 EHYRNAAHARKVEDATALASECDALVFVVDAARQLERRDLRVLEAVRKTRAALGEMRAPP 119
Query: 257 KQKRVLCMNKVDLVTKKK--DLLKVAEQFKHLPGYE--RIFMTSGLKGAGLKALTQYLM 311
+ VL +NKVD + K++ L K+ + F+ +E R+F S L GAG +AL +++
Sbjct: 120 EA--VLVLNKVDKIPKERRAGLTKMVDDFRAAGDFEFARVFPVSALTGAGTRALMDHIV 176
>gi|392378866|ref|YP_004986026.1| 16S rRNA-binding GTPase [Azospirillum brasilense Sp245]
gi|356880348|emb|CCD01297.1| 16S rRNA-binding GTPase [Azospirillum brasilense Sp245]
Length = 339
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 100/176 (56%), Gaps = 10/176 (5%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ + V ++GAPNAGKS+++N MVG+KV+ VS K TT VLG+ D+QI DT
Sbjct: 41 ENPRCGFVALVGAPNAGKSTLLNAMVGSKVSIVSSKVQTTRTRVLGITIAGDSQIIFVDT 100
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ K + + V +AW +++ ++FDV R D+ + +I R+ +Q
Sbjct: 101 PGIFKPK----RRLDRAMVAAAWQGAEDADLVGLLFDVSRRGIDQDT--LGIIARLKEQG 154
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+K +L +NK+DLV ++K LL +A+ F + IFM S G G++ L +L
Sbjct: 155 ---RKAILILNKIDLVPREK-LLGLADSFNQEGIFTDIFMLSASTGDGVEHLRGFL 206
>gi|288958024|ref|YP_003448365.1| GTP-binding protein [Azospirillum sp. B510]
gi|288910332|dbj|BAI71821.1| GTP-binding protein [Azospirillum sp. B510]
Length = 301
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 97/173 (56%), Gaps = 10/173 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ ++GAPNAGKS+++N M+G+KV+ VS K TT VLG+ + D Q+ DTPG+ K
Sbjct: 10 IALVGAPNAGKSTLLNAMIGSKVSIVSPKVQTTRTRVLGITIQGDAQMIFVDTPGIFKPK 69
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW +V+ V++DV R D+R I + R+ +Q ++ +
Sbjct: 70 RRLD----RAMVAAAWQGAEDADVIGVLYDVSRRSIDEDTRSI--VARLKEQG---REAI 120
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+DLV K+ LL +A+ F+ + IFM S G+ L Q+L ++
Sbjct: 121 LILNKIDLV-KRDVLLGIADAFRQEGIFSDIFMVSAFTEDGVGDLKQFLADRL 172
>gi|254503598|ref|ZP_05115749.1| GTP-binding protein Era [Labrenzia alexandrii DFL-11]
gi|222439669|gb|EEE46348.1| GTP-binding protein Era [Labrenzia alexandrii DFL-11]
Length = 337
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 11/181 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D K+ V +IGAPNAGKS++IN +VGTKV+ V+ K TT V GV Q+ DTP
Sbjct: 42 DTKAGFVALIGAPNAGKSTLINQLVGTKVSIVTHKVQTTRSIVRGVAMHGTAQLVFIDTP 101
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K + V++AW +V+ ++ D + + D V ++++R+ Q+
Sbjct: 102 GIFKPKRRLD----RAMVDTAWGGARDADVIALLIDARKGI---DEEVEQILKRLKGQSA 154
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFK 315
PK VL +NK D+ ++K LLK+A++ +E FM S L G G + + Y +
Sbjct: 155 PK---VLILNKTDVANREK-LLKLAQKANEYLEFEETFMVSALTGDGTQQILDYFASKMP 210
Query: 316 D 316
D
Sbjct: 211 D 211
>gi|418056706|ref|ZP_12694758.1| GTP-binding protein Era-like-protein [Hyphomicrobium denitrificans
1NES1]
gi|353209323|gb|EHB74728.1| GTP-binding protein Era-like-protein [Hyphomicrobium denitrificans
1NES1]
Length = 312
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 10/169 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++G NAGKS+++N +VGTKVA VS K TT + G+ + +QI DT G+ K
Sbjct: 21 VTVLGPTNAGKSTLVNALVGTKVAIVSHKVQTTRAPIRGIAVEGQSQIVFLDTAGIFNPK 80
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ +++AWS + + +++V D PD V+R++ER+ K A + KRV
Sbjct: 81 RRLD----RAMIDAAWSGLEDADAVLLVIDAA---AGPDDDVMRIVERL-KLA--QMKRV 130
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+NK+D V K LL +A++ ++RIFM S L+G G+ L YL
Sbjct: 131 AVLNKIDHVEDKTKLLALAKRLDQELAFDRIFMVSALEGKGVADLRSYL 179
>gi|254797278|ref|YP_003082120.1| GTP-binding protein Era [Neorickettsia risticii str. Illinois]
gi|254590519|gb|ACT69881.1| GTP-binding protein Era [Neorickettsia risticii str. Illinois]
Length = 299
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 97/174 (55%), Gaps = 14/174 (8%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG N GKS+++N ++G+K++AV+ K TT + G+ TK DTQ+ DTPG+
Sbjct: 12 RSAFVSLIGNSNVGKSTLLNALIGSKISAVTHKVQTTRTRIRGIYTKYDTQLVFVDTPGI 71
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + +V V++AW A +V ++ D R ++ ++R
Sbjct: 72 FIPRCQLE----RVIVKNAWRAFAGTDVFCLIIDPRRPVSDSTKDILR---------KAD 118
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
K VL +NK+DLV +K LL+VA++ L +E+ FM S LKG G+ L YL+
Sbjct: 119 GKLVLVINKIDLV-EKPILLEVAQELNSLSYFEKTFMISALKGNGVDDLMNYLL 171
>gi|407769069|ref|ZP_11116446.1| GTPase Era [Thalassospira xiamenensis M-5 = DSM 17429]
gi|407287989|gb|EKF13468.1| GTPase Era [Thalassospira xiamenensis M-5 = DSM 17429]
Length = 312
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 100/180 (55%), Gaps = 10/180 (5%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
Q+ V ++GAPNAGKS+++N +VGTKV+ VS K TT V G++ D Q+ DTPG
Sbjct: 17 QRCGFVALVGAPNAGKSTLLNQLVGTKVSIVSPKVQTTRTRVRGIVMTDDAQLVFIDTPG 76
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ K VK +AW+ + +++++V D +T V +I+++ Q
Sbjct: 77 IFAPKRRLDRAMVK----AAWNGADDADLVVLVIDAGAGIT---DEVRAIIDQLKSQ--- 126
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
+K +L MNKVD V K+ LL+++++F + +FM S KG+G + L +L + D
Sbjct: 127 NRKAILAMNKVDKVADKEKLLRLSQEFFAEEVFTDVFMISAKKGSGTQDLVNFLAAKMPD 186
>gi|320169486|gb|EFW46385.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 469
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 103/180 (57%), Gaps = 15/180 (8%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
+ +D + V V +IGAPNAGKSSI+N +VG V+ VS ++ +T +LG+ T+A+ Q+ +F
Sbjct: 186 QPKDSELVRVAVIGAPNAGKSSIVNSIVGRTVSIVSSRSQSTRERILGIATRANKQMVLF 245
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFE--VLMVVFDVHRHLTSPDSRVIRLIERM 250
DTPGL+ + +S + R S S L E V MVV+DV + LT D +
Sbjct: 246 DTPGLL--RFNFSRRIPIGRELSPESTRALLEADVSMVVYDVSKPLTPADHDLF-----A 298
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPG---YERIFMTSGLKGAGLKALT 307
+ P ++ +L +NKVDL K D+L AE+ PG +E++F+TS G+ +T
Sbjct: 299 ARNYP--REAILVLNKVDL-APKADILARAEEIVSRPGAKQFEKVFLTSASAHGGVSDVT 355
>gi|99034984|ref|ZP_01314786.1| hypothetical protein Wendoof_01000391 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 294
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 101/178 (56%), Gaps = 9/178 (5%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
++QK + V I G PNAGKS++IN ++G K+A V+ K TT ++ GV T +TQI D+
Sbjct: 2 KEQKCLFVTIAGLPNAGKSTLINSIIGKKIAIVTPKVQTTRTQIRGVATCNNTQIVFTDS 61
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ K K V+SAWSAV ++ +++ DV +L + + R+ + R+ +
Sbjct: 62 PGIF----SAETKLEKALVKSAWSAVKDSDITLLLVDVSNYLKNIE-RIKTIFMRLQR-- 114
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
K + +L +NK DLV K+ +L E L +E++FM S LK GL L YL E
Sbjct: 115 -TKGRCILVINKTDLV-KRPELKMAHEHLNLLYKFEKVFMISALKNDGLSDLMNYLSE 170
>gi|384261140|ref|YP_005416326.1| GTP-binding protein Era [Rhodospirillum photometricum DSM 122]
gi|378402240|emb|CCG07356.1| GTP-binding protein Era [Rhodospirillum photometricum DSM 122]
Length = 306
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 95/168 (56%), Gaps = 11/168 (6%)
Query: 143 GIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKS 202
+IG PNAGKS+++N +VG KV V+ K TT V GV+ + +Q+ + DTPG+ +
Sbjct: 18 AVIGPPNAGKSTLVNQLVGAKVTIVTHKAQTTRSRVRGVIVRGSSQVVLIDTPGIFNPQK 77
Query: 203 GYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVL 262
+ + V +AW + +++V D + LT V+ ++ER+ P +L
Sbjct: 78 RFD----RAMVAAAWEGTLEADRVLLVVDARKGLTDG---VVGILERLKDAGRPC---LL 127
Query: 263 CMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+NKVD++ + + LL++A QF + +ERIFM S L G+G + + YL
Sbjct: 128 ALNKVDVIERPR-LLEIAAQFNAVLPFERIFMISALTGSGCEDILSYL 174
>gi|403343883|gb|EJY71275.1| GTP-binding protein era, putative [Oxytricha trifallax]
Length = 788
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 102/212 (48%), Gaps = 45/212 (21%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADT--QICIFDTP 195
K + V I+GAPNAGKSSIIN+MV +++AVS K NTT VLG+ T DT Q+ DTP
Sbjct: 435 KHLDVCILGAPNAGKSSIINFMVDREISAVSNKYNTTDEAVLGLYTDYDTKCQLAFIDTP 494
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM--GKQ 253
G+ K+ S K K+ V AW + +++M V D + + D V I+R+ K
Sbjct: 495 GIT--KANNSMKS-KILVTKAWDKIGDSDMVMFVVDSVKKI---DFEVKEAIKRLKQTKI 548
Query: 254 APPKQK-----------------------------------RVLCMNKVDLVTKKKDLLK 278
P QK +L +NKVDLVT K L
Sbjct: 549 DPQHQKILDALQDDSFTDEKFSKGFYEMTEQEKEFQTYNIPSLLILNKVDLVTNKGKLRD 608
Query: 279 VAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ + + L +E+IF S L G GL L +YL
Sbjct: 609 LQNELEDLGNFEKIFHVSALSGFGLDTLREYL 640
>gi|225630483|ref|YP_002727274.1| GTP-binding protein Era [Wolbachia sp. wRi]
gi|225592464|gb|ACN95483.1| GTP-binding protein Era [Wolbachia sp. wRi]
Length = 294
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 101/178 (56%), Gaps = 9/178 (5%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
++QK + V I G PNAGKS++IN ++G K+A V+ K TT ++ GV T +TQ+ D+
Sbjct: 2 KEQKCLFVTIAGLPNAGKSTLINSIIGKKIAIVTPKVQTTRTQIRGVATCNNTQVVFTDS 61
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ K K V+SAWSAV ++ +++ DV +L + + R+ + R+ +
Sbjct: 62 PGIF----SAETKLEKALVKSAWSAVKDSDITLLLVDVSNYLKNIE-RIKTIFMRLQR-- 114
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
K + +L +NK DLV K+ +L E L +E++FM S LK GL L YL E
Sbjct: 115 -TKGRCILVINKTDLV-KRPELKMAHEHLNLLYKFEKVFMISALKNDGLSDLMNYLSE 170
>gi|118587960|ref|ZP_01545370.1| GTP-binding protein Era [Stappia aggregata IAM 12614]
gi|118439582|gb|EAV46213.1| GTP-binding protein Era [Stappia aggregata IAM 12614]
Length = 335
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 95/181 (52%), Gaps = 11/181 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D K+ + +IGAPNAGKS++IN +VGTKV+ V+ K TT V GV Q+ DTP
Sbjct: 40 DTKAGFIALIGAPNAGKSTLINQLVGTKVSIVTHKVQTTRTIVRGVAMHGAAQLVFIDTP 99
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K + V++AW +++ ++ D + LT V +++R+ Q
Sbjct: 100 GIFKPKRRLD----RAMVDTAWGGARDADLIALLVDARKGLT---EEVENILKRLSSQQA 152
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFK 315
PK VL +NK D V K++ LL++A++ +E FM S L G G + + Y +
Sbjct: 153 PK---VLILNKTD-VAKREKLLQLAQKINEFVRFEETFMVSALTGDGTQTILDYFASKVP 208
Query: 316 D 316
D
Sbjct: 209 D 209
>gi|300023748|ref|YP_003756359.1| GTP-binding protein Era [Hyphomicrobium denitrificans ATCC 51888]
gi|299525569|gb|ADJ24038.1| GTP-binding protein Era [Hyphomicrobium denitrificans ATCC 51888]
Length = 312
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 100/185 (54%), Gaps = 10/185 (5%)
Query: 126 EEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKA 185
EE + + D++ V ++G NAGKS+++N +VGTKVA VS K TT + G+ +
Sbjct: 5 EETHGQSEAGDRRCGFVTVLGPTNAGKSTLVNALVGTKVAIVSHKVQTTRAPIRGIAVEG 64
Query: 186 DTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIR 245
+QI DT G+ K + +++AWS + + +++V D PD V+
Sbjct: 65 QSQIVFLDTAGIFNPKRRLD----RAMIDAAWSGLEDADAVLLVIDAA---AGPDDDVMA 117
Query: 246 LIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKA 305
+++R+ K A + KR+ +NK+D V K LL +A++ ++RIFM S L G G+
Sbjct: 118 IVQRL-KTA--RMKRIAVLNKIDRVEDKPKLLALAKRLDQELAFDRIFMVSALDGKGVAD 174
Query: 306 LTQYL 310
L YL
Sbjct: 175 LRTYL 179
>gi|88608771|ref|YP_506823.1| GTP-binding protein Era [Neorickettsia sennetsu str. Miyayama]
gi|88600940|gb|ABD46408.1| GTP-binding protein Era [Neorickettsia sennetsu str. Miyayama]
Length = 308
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 96/176 (54%), Gaps = 14/176 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG N GKS+++N ++G+K++AV+ K TT + G+ TK D Q+ DTPG+
Sbjct: 21 RSAFVSLIGNSNVGKSTLLNALIGSKISAVTHKVQTTRTRIRGIYTKDDVQLVFVDTPGI 80
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + +V V++AW A ++ + D R ++ ++R
Sbjct: 81 FIPRCQLE----RVIVKNAWRAFAGTDIFCFIIDPRRPISDSTKDILR---------KAN 127
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
K VL +NK+DLV K + LL+VA++ L +E+ FM S LKG G+ L YL++
Sbjct: 128 GKLVLVINKIDLVEKPR-LLEVAQELNSLGHFEKTFMISALKGNGVADLMNYLLKS 182
>gi|225631158|ref|ZP_03787866.1| GTP-binding protein Era [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225591145|gb|EEH12319.1| GTP-binding protein Era [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 294
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 101/178 (56%), Gaps = 9/178 (5%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
++QK + V I G PNAGKS++IN ++G K+A V+ K TT ++ GV T +TQ+ D+
Sbjct: 2 KEQKCLFVTIAGLPNAGKSTLINSIIGKKIAIVTPKVQTTRTQIRGVATCNNTQVVFTDS 61
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ ++ K V SAWSAV ++ +++ DV +L + + R+ + R+ +
Sbjct: 62 PGIFSAETKLE----KALVRSAWSAVKDSDITLLLVDVSHYLKNIE-RIKTIFMRLQR-- 114
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
K + +L +NK DLV K+ +L E L +E++FM S LK GL L YL E
Sbjct: 115 -TKGRCILVINKTDLV-KRPELKMAHEHLNLLYKFEKVFMISALKNDGLSDLMNYLSE 170
>gi|42520585|ref|NP_966500.1| GTP-binding protein Era [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42410324|gb|AAS14434.1| GTP-binding protein Era [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 294
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 100/178 (56%), Gaps = 9/178 (5%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
++QK + V I G PNAGKS++IN ++G K+A V+ K TT ++ GV T +TQI D+
Sbjct: 2 KEQKCLFVTIAGLPNAGKSTLINSIIGKKIAIVTPKVQTTRTQIRGVATCNNTQIVFTDS 61
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ K K V+SAWSAV ++ + + DV +L + + R+ + R+ +
Sbjct: 62 PGIF----SAETKLEKALVKSAWSAVKDSDITLSLVDVSNYLKNIE-RIKTIFMRLQR-- 114
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
K + +L +NK DLV K+ +L E L +E++FM S LK GL L YL E
Sbjct: 115 -TKGRCILVINKTDLV-KRPELKMAHEHLNLLYKFEKVFMISALKNDGLSDLMNYLSE 170
>gi|330822063|ref|XP_003291620.1| hypothetical protein DICPUDRAFT_39284 [Dictyostelium purpureum]
gi|325078185|gb|EGC31850.1| hypothetical protein DICPUDRAFT_39284 [Dictyostelium purpureum]
Length = 398
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 109/197 (55%), Gaps = 22/197 (11%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ K + + +IGAPNAGKS+++N +VG KV AVS +TT +LGV T+ DTQ+ DTP
Sbjct: 89 NAKKLNIAVIGAPNAGKSTLVNAIVGEKVCAVSHIEHTTRDAILGVYTEGDTQLLFNDTP 148
Query: 196 GLMLNKSGYSHKDVKVR--VESAWSAVNLFEVLMVVFDVHRHLTSPDSRVI------RLI 247
G++ N +K+ VR V AW+ V +++++V D + PD++ I ++I
Sbjct: 149 GMIKN----FNKNTNVREFVNLAWTTVKESDLVLMVVDATNN-NQPDTKYIINHLEDQMI 203
Query: 248 ERMGK---------QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGL 298
E + K + ++ +L +NKVDLV KK+DL+++ + + F+ S
Sbjct: 204 ELLKKAKLEDIENGEIEDEKDFILVINKVDLVRKKEDLVELISELNEGNIFSDTFVVSAT 263
Query: 299 KGAGLKALTQYLMEQFK 315
L +L +YL+ + K
Sbjct: 264 NNVKLDSLKEYLVGKAK 280
>gi|154253315|ref|YP_001414139.1| GTP-binding protein Era [Parvibaculum lavamentivorans DS-1]
gi|154157265|gb|ABS64482.1| GTP-binding protein Era [Parvibaculum lavamentivorans DS-1]
Length = 318
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 94/169 (55%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIGAPNAGKS+++N +VG+KVA V+ K TT + G+ + +TQI DTPG+ K
Sbjct: 28 VAIIGAPNAGKSTLLNQLVGSKVAIVTHKVQTTRSRIRGIAMEGNTQIVFVDTPGIFKPK 87
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V++AW ++++++ D+ + DS V R++E + Q +K +
Sbjct: 88 RRLD----RAMVDAAWGGAGDSDLIVLMVDME---SGRDSDVDRILEGLKSQG---RKAI 137
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NKVD ++K LLK A + FM S LKG G+ L +YL
Sbjct: 138 LVLNKVDACPREK-LLKTAAALNETGIFTETFMISALKGDGVADLKKYL 185
>gi|148560637|ref|YP_001258647.1| GTP-binding protein Era [Brucella ovis ATCC 25840]
gi|225627161|ref|ZP_03785199.1| GTP-binding protein Era [Brucella ceti str. Cudo]
gi|225852184|ref|YP_002732417.1| GTP-binding protein Era [Brucella melitensis ATCC 23457]
gi|256264306|ref|ZP_05466838.1| GTP-binding protein Era [Brucella melitensis bv. 2 str. 63/9]
gi|261218968|ref|ZP_05933249.1| GTP-binding protein era [Brucella ceti M13/05/1]
gi|261221864|ref|ZP_05936145.1| GTP-binding protein era [Brucella ceti B1/94]
gi|261315122|ref|ZP_05954319.1| GTP-binding protein era [Brucella pinnipedialis M163/99/10]
gi|261317323|ref|ZP_05956520.1| GTP-binding protein era [Brucella pinnipedialis B2/94]
gi|261321533|ref|ZP_05960730.1| GTP-binding protein era [Brucella ceti M644/93/1]
gi|261751990|ref|ZP_05995699.1| GTP-binding protein era [Brucella suis bv. 5 str. 513]
gi|261757877|ref|ZP_06001586.1| GTP-binding protein Era [Brucella sp. F5/99]
gi|265988361|ref|ZP_06100918.1| GTP-binding protein era [Brucella pinnipedialis M292/94/1]
gi|265994610|ref|ZP_06107167.1| GTP-binding protein era [Brucella melitensis bv. 3 str. Ether]
gi|265997828|ref|ZP_06110385.1| GTP-binding protein era [Brucella ceti M490/95/1]
gi|294852026|ref|ZP_06792699.1| GTP-binding protein Era [Brucella sp. NVSL 07-0026]
gi|340790295|ref|YP_004755760.1| GTP-binding protein Era [Brucella pinnipedialis B2/94]
gi|384211046|ref|YP_005600128.1| GTP-binding protein Era [Brucella melitensis M5-90]
gi|384408137|ref|YP_005596758.1| GTP-binding protein Era [Brucella melitensis M28]
gi|384444752|ref|YP_005603471.1| GTP-binding protein Era [Brucella melitensis NI]
gi|148371894|gb|ABQ61873.1| GTP-binding protein Era [Brucella ovis ATCC 25840]
gi|225617996|gb|EEH15040.1| GTP-binding protein Era [Brucella ceti str. Cudo]
gi|225640549|gb|ACO00463.1| GTP-binding protein Era [Brucella melitensis ATCC 23457]
gi|260920448|gb|EEX87101.1| GTP-binding protein era [Brucella ceti B1/94]
gi|260924057|gb|EEX90625.1| GTP-binding protein era [Brucella ceti M13/05/1]
gi|261294223|gb|EEX97719.1| GTP-binding protein era [Brucella ceti M644/93/1]
gi|261296546|gb|EEY00043.1| GTP-binding protein era [Brucella pinnipedialis B2/94]
gi|261304148|gb|EEY07645.1| GTP-binding protein era [Brucella pinnipedialis M163/99/10]
gi|261737861|gb|EEY25857.1| GTP-binding protein Era [Brucella sp. F5/99]
gi|261741743|gb|EEY29669.1| GTP-binding protein era [Brucella suis bv. 5 str. 513]
gi|262552296|gb|EEZ08286.1| GTP-binding protein era [Brucella ceti M490/95/1]
gi|262765723|gb|EEZ11512.1| GTP-binding protein era [Brucella melitensis bv. 3 str. Ether]
gi|263094579|gb|EEZ18377.1| GTP-binding protein Era [Brucella melitensis bv. 2 str. 63/9]
gi|264660558|gb|EEZ30819.1| GTP-binding protein era [Brucella pinnipedialis M292/94/1]
gi|294820615|gb|EFG37614.1| GTP-binding protein Era [Brucella sp. NVSL 07-0026]
gi|326408684|gb|ADZ65749.1| GTP-binding protein Era [Brucella melitensis M28]
gi|326538409|gb|ADZ86624.1| GTP-binding protein Era [Brucella melitensis M5-90]
gi|340558754|gb|AEK53992.1| GTP-binding protein Era [Brucella pinnipedialis B2/94]
gi|349742748|gb|AEQ08291.1| GTP-binding protein Era [Brucella melitensis NI]
Length = 311
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
E + +S V +IGAPNAGKS+++N +VGTKV+ V+ K TT V G+ + QI
Sbjct: 11 ETEATQTRSGFVALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEGPAQIV 70
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM 250
+ DTPG+ K + V +AW ++++V+ D + L+E M
Sbjct: 71 LVDTPGIFRPKRRLD----RAMVTTAWGGAKDADIILVIIDAQGGF---NENAEALLESM 123
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+QK+VL +NKVD V LL +A++ L ++R FM S L G+G K L +YL
Sbjct: 124 KDV---RQKKVLVLNKVDRVDPPV-LLSLAQKANELVPFDRTFMISALNGSGCKDLAKYL 179
Query: 311 ME 312
E
Sbjct: 180 AE 181
>gi|261754649|ref|ZP_05998358.1| GTP-binding protein era [Brucella suis bv. 3 str. 686]
gi|261744402|gb|EEY32328.1| GTP-binding protein era [Brucella suis bv. 3 str. 686]
Length = 311
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
E + +S V +IGAPNAGKS+++N +VGTKV+ V+ K TT V G+ + QI
Sbjct: 11 ETEATQTRSGFVALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEGPAQIV 70
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM 250
+ DTPG+ K + V +AW ++++V+ D + L+E M
Sbjct: 71 LVDTPGIFRPKRRLD----RAMVTTAWGGAKDADIILVIIDAQGGF---NENAEALLESM 123
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+QK+VL +NKVD V LL +A++ L ++R FM S L G+G K L +YL
Sbjct: 124 KDV---RQKKVLVLNKVDRVDPPV-LLSLAQKANELVPFDRTFMISALNGSGCKDLAKYL 179
Query: 311 ME 312
E
Sbjct: 180 AE 181
>gi|265983785|ref|ZP_06096520.1| GTP-binding protein era [Brucella sp. 83/13]
gi|306837523|ref|ZP_07470398.1| GTP-binding protein Era [Brucella sp. NF 2653]
gi|306845264|ref|ZP_07477840.1| GTP-binding protein Era [Brucella inopinata BO1]
gi|264662377|gb|EEZ32638.1| GTP-binding protein era [Brucella sp. 83/13]
gi|306274423|gb|EFM56230.1| GTP-binding protein Era [Brucella inopinata BO1]
gi|306407415|gb|EFM63619.1| GTP-binding protein Era [Brucella sp. NF 2653]
Length = 311
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
E + +S V +IGAPNAGKS+++N +VGTKV+ V+ K TT V G+ + QI
Sbjct: 11 ETEATQTRSGFVALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEGPAQIV 70
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM 250
+ DTPG+ K + V +AW ++++V+ D + L+E M
Sbjct: 71 LVDTPGIFRPKRRLD----RAMVTTAWGGAKDADIILVIIDAQGGF---NENAEALLESM 123
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+QK+VL +NKVD V LL +A++ L ++R FM S L G+G K L +YL
Sbjct: 124 KDV---RQKKVLVLNKVDRVDPPV-LLSLAQKANELVPFDRTFMISALNGSGCKDLAKYL 179
Query: 311 ME 312
E
Sbjct: 180 AE 181
>gi|23501550|ref|NP_697677.1| GTP-binding protein Era [Brucella suis 1330]
gi|161618633|ref|YP_001592520.1| GTP-binding protein Era [Brucella canis ATCC 23365]
gi|260566757|ref|ZP_05837227.1| GTP-binding protein Era [Brucella suis bv. 4 str. 40]
gi|376274587|ref|YP_005115026.1| GTP-binding protein Era [Brucella canis HSK A52141]
gi|376280343|ref|YP_005154349.1| GTP-binding protein Era [Brucella suis VBI22]
gi|384224337|ref|YP_005615501.1| GTP-binding protein Era [Brucella suis 1330]
gi|38257341|sp|Q8G1P9.1|ERA_BRUSU RecName: Full=GTPase Era
gi|23347461|gb|AAN29592.1| GTP-binding protein Era [Brucella suis 1330]
gi|161335444|gb|ABX61749.1| GTP-binding protein Era [Brucella canis ATCC 23365]
gi|260156275|gb|EEW91355.1| GTP-binding protein Era [Brucella suis bv. 4 str. 40]
gi|343382517|gb|AEM18009.1| GTP-binding protein Era [Brucella suis 1330]
gi|358257942|gb|AEU05677.1| GTP-binding protein Era [Brucella suis VBI22]
gi|363403154|gb|AEW13449.1| GTP-binding protein Era [Brucella canis HSK A52141]
Length = 311
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
E + +S V +IGAPNAGKS+++N +VGTKV+ V+ K TT V G+ + QI
Sbjct: 11 ETEATQTRSGFVALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEGPAQIV 70
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM 250
+ DTPG+ K + V +AW ++++V+ D + L+E M
Sbjct: 71 LVDTPGIFRPKRRLD----RAMVTTAWGGAKDADIILVIIDAQGGF---NENAEALLESM 123
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+QK+VL +NKVD V LL +A++ L ++R FM S L G+G K L +YL
Sbjct: 124 KDV---RQKKVLVLNKVDRVDPPV-LLSLAQKANELVPFDRTFMISALNGSGCKDLAKYL 179
Query: 311 ME 312
E
Sbjct: 180 AE 181
>gi|261324781|ref|ZP_05963978.1| GTP-binding protein era [Brucella neotomae 5K33]
gi|261300761|gb|EEY04258.1| GTP-binding protein era [Brucella neotomae 5K33]
Length = 311
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
E + +S V +IGAPNAGKS+++N +VGTKV+ V+ K TT V G+ + QI
Sbjct: 11 ETEATQTRSGFVALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEGPAQIV 70
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM 250
+ DTPG+ K + V +AW ++++V+ D + L+E M
Sbjct: 71 LVDTPGIFRPKRRLD----RAMVTTAWGGAKDADIILVIIDAQGGF---NENAEALLESM 123
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+QK+VL +NKVD V LL +A++ L ++R FM S L G+G K L +YL
Sbjct: 124 KDV---RQKKVLVLNKVDRVDPPV-LLSLAQKANELVPFDRTFMISALNGSGCKDLAKYL 179
Query: 311 ME 312
E
Sbjct: 180 AE 181
>gi|452966441|gb|EME71452.1| GTP-binding protein Era [Magnetospirillum sp. SO-1]
Length = 303
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
EV + DQ+ V ++GAPNAGKS+++N +VGTKV+ VS K TT V+G+ + Q+
Sbjct: 3 EVSQADQRCGFVAVVGAPNAGKSTLVNALVGTKVSIVSPKVQTTRFRVMGIAMVGEAQVI 62
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM 250
+ DTPG+ K + V +AW N + + ++ D R +SR I +
Sbjct: 63 LVDTPGIFQPKKRLE----RAMVAAAWGGTNDADHICLLIDAARGYDD-ESRAI-----V 112
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K K++ +L +NKVDLV + K LL + Q + +FM S LKG G+ L +L
Sbjct: 113 DKLKETKRQAILVLNKVDLVKRDK-LLGLTAQLDAEGIFTDVFMISALKGDGIADLLAHL 171
>gi|62289623|ref|YP_221416.1| GTP-binding protein Era [Brucella abortus bv. 1 str. 9-941]
gi|82699551|ref|YP_414125.1| GTP-binding protein Era [Brucella melitensis biovar Abortus 2308]
gi|189023876|ref|YP_001934644.1| GTP-binding protein Era [Brucella abortus S19]
gi|237815118|ref|ZP_04594116.1| GTP-binding protein Era [Brucella abortus str. 2308 A]
gi|260545622|ref|ZP_05821363.1| GTP-binding protein Era [Brucella abortus NCTC 8038]
gi|260754425|ref|ZP_05866773.1| GTP-binding protein era [Brucella abortus bv. 6 str. 870]
gi|260757644|ref|ZP_05869992.1| GTP-binding protein era [Brucella abortus bv. 4 str. 292]
gi|260761471|ref|ZP_05873814.1| GTP-binding protein era [Brucella abortus bv. 2 str. 86/8/59]
gi|260883453|ref|ZP_05895067.1| GTP-binding protein era [Brucella abortus bv. 9 str. C68]
gi|261213671|ref|ZP_05927952.1| GTP-binding protein era [Brucella abortus bv. 3 str. Tulya]
gi|297248034|ref|ZP_06931752.1| GTP-binding protein Era [Brucella abortus bv. 5 str. B3196]
gi|376273607|ref|YP_005152185.1| GTP-binding protein Era [Brucella abortus A13334]
gi|423167199|ref|ZP_17153902.1| GTPase Era [Brucella abortus bv. 1 str. NI435a]
gi|423170424|ref|ZP_17157099.1| GTPase Era [Brucella abortus bv. 1 str. NI474]
gi|423173495|ref|ZP_17160166.1| GTPase Era [Brucella abortus bv. 1 str. NI486]
gi|423177220|ref|ZP_17163866.1| GTPase Era [Brucella abortus bv. 1 str. NI488]
gi|423179855|ref|ZP_17166496.1| GTPase Era [Brucella abortus bv. 1 str. NI010]
gi|423182987|ref|ZP_17169624.1| GTPase Era [Brucella abortus bv. 1 str. NI016]
gi|423186071|ref|ZP_17172685.1| GTPase Era [Brucella abortus bv. 1 str. NI021]
gi|423189210|ref|ZP_17175820.1| GTPase Era [Brucella abortus bv. 1 str. NI259]
gi|62195755|gb|AAX74055.1| Era, GTP-binding protein Era [Brucella abortus bv. 1 str. 9-941]
gi|82615652|emb|CAJ10639.1| Serpin:Elongation factor, GTP-binding:ATP/GTP-binding site motif A
(P-loop):Type 2 KH domain:Small GTP-binding protein
domain [Brucella melitensis biovar Abortus 2308]
gi|189019448|gb|ACD72170.1| GTP-binding protein Era [Brucella abortus S19]
gi|237789955|gb|EEP64165.1| GTP-binding protein Era [Brucella abortus str. 2308 A]
gi|260097029|gb|EEW80904.1| GTP-binding protein Era [Brucella abortus NCTC 8038]
gi|260667962|gb|EEX54902.1| GTP-binding protein era [Brucella abortus bv. 4 str. 292]
gi|260671903|gb|EEX58724.1| GTP-binding protein era [Brucella abortus bv. 2 str. 86/8/59]
gi|260674533|gb|EEX61354.1| GTP-binding protein era [Brucella abortus bv. 6 str. 870]
gi|260872981|gb|EEX80050.1| GTP-binding protein era [Brucella abortus bv. 9 str. C68]
gi|260915278|gb|EEX82139.1| GTP-binding protein era [Brucella abortus bv. 3 str. Tulya]
gi|297175203|gb|EFH34550.1| GTP-binding protein Era [Brucella abortus bv. 5 str. B3196]
gi|363401213|gb|AEW18183.1| GTP-binding protein Era [Brucella abortus A13334]
gi|374541350|gb|EHR12846.1| GTPase Era [Brucella abortus bv. 1 str. NI474]
gi|374541622|gb|EHR13116.1| GTPase Era [Brucella abortus bv. 1 str. NI435a]
gi|374542824|gb|EHR14311.1| GTPase Era [Brucella abortus bv. 1 str. NI486]
gi|374549700|gb|EHR21142.1| GTPase Era [Brucella abortus bv. 1 str. NI010]
gi|374550219|gb|EHR21658.1| GTPase Era [Brucella abortus bv. 1 str. NI016]
gi|374551727|gb|EHR23159.1| GTPase Era [Brucella abortus bv. 1 str. NI488]
gi|374557753|gb|EHR29148.1| GTPase Era [Brucella abortus bv. 1 str. NI259]
gi|374559459|gb|EHR30847.1| GTPase Era [Brucella abortus bv. 1 str. NI021]
Length = 311
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
E + +S V +IGAPNAGKS+++N +VGTKV+ V+ K TT V G+ + QI
Sbjct: 11 ETEATQTRSGFVALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEGPAQIV 70
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM 250
+ DTPG+ K + V +AW ++++V+ D + L+E M
Sbjct: 71 LVDTPGIFRPKRRLD----RAMVTTAWGGAKDADIILVIIDAQGGF---NENAEALLESM 123
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+QK+VL +NKVD V LL +A++ L ++R FM S L G+G K L +YL
Sbjct: 124 KDI---RQKKVLVLNKVDRVDPPV-LLSLAQKANELVPFDRTFMISALNGSGCKDLAKYL 179
Query: 311 ME 312
E
Sbjct: 180 AE 181
>gi|114706261|ref|ZP_01439163.1| GTP-binding protein Era [Fulvimarina pelagi HTCC2506]
gi|114538122|gb|EAU41244.1| GTP-binding protein Era [Fulvimarina pelagi HTCC2506]
Length = 318
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 11/173 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IGAPNAGKS+++N +VGTKV+ V+ K TT V G+ K TQI DTPG+
Sbjct: 25 RSGFVALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIAIKDRTQIVFVDTPGV 84
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ VK +AWS ++L+ + D R + SP+ +I +ER+ +
Sbjct: 85 FSPRRRLDRAMVK----TAWSGAKDADILLAIVDAERGV-SPELELI--LERL---KDVR 134
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
Q +VL +NK+D + + K LL + +Q ++++FM S L G+G K L +L
Sbjct: 135 QTKVLLLNKIDRIKRDK-LLGLTQQIVDKVVFDQVFMISALDGSGCKDLMTWL 186
>gi|46201859|ref|ZP_00054208.2| COG1159: GTPase [Magnetospirillum magnetotacticum MS-1]
Length = 303
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
EV E DQ+ V ++GAPNAGKS+++N +VGTKV+ VS K TT V+G+ + Q+
Sbjct: 3 EVPETDQRCGFVAVVGAPNAGKSTLVNALVGTKVSIVSPKVQTTRFRVMGIAMVGEAQVV 62
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM 250
+ DTPG+ K + V +AW N + + ++ D + +SR I +
Sbjct: 63 LVDTPGIFAPKKRLE----RAMVAAAWGGTNDADHICLLIDAAKGYDD-ESRAI-----V 112
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K K++ +L +NKVDLV + K LL + Q + +FM S LKG G+ L +L
Sbjct: 113 DKLKETKRQAILVLNKVDLVKRDK-LLGLTAQLDAEGIFTDVFMISALKGDGIDDLLAHL 171
>gi|393766232|ref|ZP_10354788.1| GTP-binding protein Era [Methylobacterium sp. GXF4]
gi|392728013|gb|EIZ85322.1| GTP-binding protein Era [Methylobacterium sp. GXF4]
Length = 328
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 98/175 (56%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D ++ V +IG PNAGKS+++N +VGTKV+ VSRK TT V G++ + Q+ + DTP
Sbjct: 32 DSRAGFVALIGVPNAGKSTLLNNLVGTKVSIVSRKVQTTRALVRGILIEGSAQVILVDTP 91
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K + V SAWS + + ++ D + L D V ++ R+G+
Sbjct: 92 GIFAPKRRLD----RAMVHSAWSGAADADAVCLLVDARKGL---DEEVEAILSRLGEV-- 142
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K++++L +NK+DL+ +++ LL +A + + FM S LKG G+ L + L
Sbjct: 143 -KREKMLILNKIDLIPRER-LLDLAAKLNAASPFAETFMISALKGDGVGDLRRAL 195
>gi|17987569|ref|NP_540203.1| GTP-binding protein Era [Brucella melitensis bv. 1 str. 16M]
gi|260563711|ref|ZP_05834197.1| GTP-binding protein era [Brucella melitensis bv. 1 str. 16M]
gi|265990774|ref|ZP_06103331.1| GTP-binding protein era [Brucella melitensis bv. 1 str. Rev.1]
gi|21263580|sp|Q8YG75.1|ERA_BRUME RecName: Full=GTPase Era
gi|17983273|gb|AAL52467.1| gtp-binding protein era [Brucella melitensis bv. 1 str. 16M]
gi|260153727|gb|EEW88819.1| GTP-binding protein era [Brucella melitensis bv. 1 str. 16M]
gi|263001558|gb|EEZ14133.1| GTP-binding protein era [Brucella melitensis bv. 1 str. Rev.1]
Length = 311
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
E + +S V +IGAPNAGKS+++N +VGTKV+ V+ K TT V G+ + QI
Sbjct: 11 ETEATQTRSGFVALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEGPAQIV 70
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM 250
+ DTPG+ K + V +AW ++++V+ D + L+E M
Sbjct: 71 LVDTPGIFRPKRRLD----RAMVTTAWGGAKDADIILVIIDAQGGF---NENAEALLESM 123
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+QK+VL +NKVD V LL +A++ L ++R FM S L G+G K L +YL
Sbjct: 124 KDV---RQKKVLVLNKVDRVDPPV-LLSLAQKANGLVPFDRTFMISALNGSGCKDLAKYL 179
Query: 311 ME 312
E
Sbjct: 180 AE 181
>gi|209964795|ref|YP_002297710.1| GTP-binding protein Era [Rhodospirillum centenum SW]
gi|209958261|gb|ACI98897.1| GTP-binding protein Era [Rhodospirillum centenum SW]
Length = 340
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 96/169 (56%), Gaps = 10/169 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ ++GAPNAGKS+++N +VG KV+ VS K TT VLG+ D+Q+ DTPG+ K
Sbjct: 50 IALVGAPNAGKSTLLNALVGAKVSIVSPKVQTTRSRVLGIGITGDSQLLFVDTPGIFKPK 109
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW +++++++D D+ + +IER+ K+A + +
Sbjct: 110 RRLD----RAMVAAAWQGATDADLIVMLYDASNDRLDEDT--LGIIERL-KEA--GRTAI 160
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NKVDL+ ++K LLK+A + + R FM S L G GL L+ +L
Sbjct: 161 LALNKVDLIKREK-LLKLAAELDSHGIFTRTFMISALTGDGLADLSAFL 208
>gi|395784356|ref|ZP_10464194.1| GTP-binding protein Era [Bartonella melophagi K-2C]
gi|395423606|gb|EJF89800.1| GTP-binding protein Era [Bartonella melophagi K-2C]
Length = 301
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N +VGTKV+ V+ K TT V G++ +TQI + DTPG+
Sbjct: 12 VALIGMPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLVRGIVIYENTQIILIDTPGVFRPH 71
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
H V +AWS ++L+++ DV + L+ ++ ++E + KQ ++
Sbjct: 72 KRLEH----AMVSTAWSGARGADILLILIDVQKGLSDEVDAMLNVLENI------KQDKI 121
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V + LL + + + + FM S L G+G K L YL
Sbjct: 122 LVLNKIDTVA-RTSLLALTAKINERMKFLQTFMISALNGSGCKDLLHYL 169
>gi|393722120|ref|ZP_10342047.1| GTPase Era [Sphingomonas sp. PAMC 26605]
Length = 302
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 11/178 (6%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QK V I+GAPNAGKS+++N +VG KVA VS K TT ++GV + DTQ+ + DTPG
Sbjct: 8 QKCGLVAILGAPNAGKSTLVNALVGQKVAIVSPKAQTTRVRLMGVAIEGDTQLLLVDTPG 67
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ K + V++AW + +VL +V D L S+V + E + + P
Sbjct: 68 IFEPKRRLD----RAMVQAAWGGADGADVLALVVDAKGGL---GSKVTTIAEAIAHRPEP 120
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
K L +NKVDL K K LL AE+ + ++ +F S G GL L +L ++
Sbjct: 121 K---YLILNKVDLADKGKLLLH-AEKLTAMVQFDEVFFVSASTGDGLPELKAHLAQRM 174
>gi|66805837|ref|XP_636640.1| hypothetical protein DDB_G0288609 [Dictyostelium discoideum AX4]
gi|60465029|gb|EAL63136.1| hypothetical protein DDB_G0288609 [Dictyostelium discoideum AX4]
Length = 398
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 116/223 (52%), Gaps = 32/223 (14%)
Query: 123 ERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVM 182
E+ + E + E+ K++ V IIGAPNAGKS+++N +VG K+ AVS +TT VLG+
Sbjct: 98 EQSMQLETPIHNENAKTLNVAIIGAPNAGKSTLVNSIVGEKICAVSPTEHTTRDAVLGIY 157
Query: 183 TKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSP--- 239
+K DTQI DTPG++ N + +H V+ V AW V +++++V D + +S
Sbjct: 158 SKDDTQILFHDTPGIIKNFNRMAH--VREFVNLAWGVVKEADIVLLVVDATNNNSSDTEF 215
Query: 240 -----DSRVIRLIERMGKQ----------------------APPKQKRVLCMNKVDLVTK 272
+ +++ LI+RM + + +++ +L +NKVDLV K
Sbjct: 216 IVGKLEEQMLNLIKRMRMEQTNAKANAATASNEELGAIVNDSLDEKEFILVVNKVDLVKK 275
Query: 273 KKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFK 315
K+ L+++ Q + F+ S ++ LT +L+ + K
Sbjct: 276 KETLVQMISQLNEGNIFTDTFIVSATSNIRVEDLTNFLLTKAK 318
>gi|315122354|ref|YP_004062843.1| GTP-binding protein Era [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495756|gb|ADR52355.1| GTP-binding protein Era [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 310
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 102/183 (55%), Gaps = 11/183 (6%)
Query: 128 EEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADT 187
E + E +S V ++GA NAGKS+++N VG KV+ V+ K TT V G++++ D
Sbjct: 9 EHNGLVEYKTRSGCVALVGATNAGKSTLVNKFVGAKVSIVTHKVQTTRSIVRGIVSEKDV 68
Query: 188 QICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLI 247
Q+ DTPG+ K Y K+ + +WS V +++ +V D +R L PD V ++
Sbjct: 69 QVVFLDTPGIFKAKDSYH----KMMIRLSWSTVKHADIVFLVIDSNRGL-QPD--VHDIL 121
Query: 248 ERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALT 307
+ +GK++ + VL +NK+D V K + LL+ AE L E+ FM S LKG G + +
Sbjct: 122 KEIGKRSG---RLVLILNKIDCV-KPERLLEQAEIINKLVCVEKTFMVSALKGHGCQDVL 177
Query: 308 QYL 310
YL
Sbjct: 178 NYL 180
>gi|418300579|ref|ZP_12912399.1| GTPase Era [Agrobacterium tumefaciens CCNWGS0286]
gi|355533317|gb|EHH02652.1| GTPase Era [Agrobacterium tumefaciens CCNWGS0286]
Length = 313
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG NAGKS+++N +VG KV+ VS K TT + G+ + QI DTPG+
Sbjct: 19 RSGFVALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAVMRGIAIHKNAQIVFMDTPGI 78
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + V SAW ++++++ D R L ++ + K P
Sbjct: 79 FKPRRRLD----RAMVTSAWGGAKDADLILLLIDSERGLKGDAEAILEGL----KDVP-- 128
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
QK++LC+NK+D V K++DLLK+A ++R FM S G+G + L YL+E
Sbjct: 129 QKKILCLNKIDQV-KREDLLKLAAAANETVAFDRTFMISATNGSGCEDLMDYLVEAL 184
>gi|389691084|ref|ZP_10179977.1| GTP-binding protein Era [Microvirga sp. WSM3557]
gi|388589327|gb|EIM29616.1| GTP-binding protein Era [Microvirga sp. WSM3557]
Length = 304
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 100/187 (53%), Gaps = 11/187 (5%)
Query: 130 EEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQI 189
E+ ++ + K+ V +IGAPNAGKS+++N +VG+KV+ VSRK TT V G+ + + QI
Sbjct: 2 EQPEQTNTKAGFVALIGAPNAGKSTLLNSLVGSKVSIVSRKVQTTRALVRGIAIEGEAQI 61
Query: 190 CIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIER 249
DTPG+ K + V SAW +V+ ++ D + + ++ +
Sbjct: 62 VFVDTPGIFKPKRRLD----RAMVTSAWGGAGDADVIALLLDARKGIDEEAEAILAKLPE 117
Query: 250 MGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQY 309
+ K+ +VL +NK+DL+ + K LL++A + + FM S LKG G++ L +
Sbjct: 118 L------KRPKVLILNKIDLIERSK-LLEMAAKLNETVPFAHTFMISALKGDGIQTLKRQ 170
Query: 310 LMEQFKD 316
L E +
Sbjct: 171 LAEMMPE 177
>gi|190571107|ref|YP_001975465.1| GTP-binding protein Era [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019630|ref|ZP_03335436.1| GTP-binding protein Era [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357379|emb|CAQ54813.1| GTP-binding protein Era [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995052|gb|EEB55694.1| GTP-binding protein Era [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 294
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 100/178 (56%), Gaps = 9/178 (5%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
+++K + V I G PNAGKS++IN +VG K+A V+ K TT +V GV + QI D+
Sbjct: 2 KEEKCLFVTIAGLPNAGKSTLINSIVGKKIAIVTPKVQTTRTQVRGVAICNNAQIVFTDS 61
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ ++ K V+SAW AV ++ +++ DV+ +L + + R+ + R+ +
Sbjct: 62 PGVFSAETNLE----KALVKSAWGAVKDSDITLLLVDVNNYLKNIE-RIKTIFARLERT- 115
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
K + +L +NK DLV KK +L E L +E+IF S LK GL LT YL E
Sbjct: 116 --KGRCILVINKTDLV-KKSELKMAHEHLNLLYKFEKIFTISALKNDGLSDLTSYLSE 170
>gi|148256031|ref|YP_001240616.1| GTP-binding protein Era [Bradyrhizobium sp. BTAi1]
gi|189037293|sp|A5EKL6.1|ERA_BRASB RecName: Full=GTPase Era
gi|146408204|gb|ABQ36710.1| GTP-binding protein (era) [Bradyrhizobium sp. BTAi1]
Length = 308
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VSRK TT + G++ + +QI + DTPG+ K
Sbjct: 18 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEGTSQIILVDTPGIFSPK 77
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D + L +I K A +++
Sbjct: 78 RRLD----RAMVTTAWSGAHDADLVCVLLDAKKGLDDEAQAII------DKAAAVAHQKI 127
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NKVDLV ++K L VA + LP + R FM S L G G+ L Q L
Sbjct: 128 LVVNKVDLVPREKLLALVAAANEKLP-FARTFMISALSGDGVDDLKQAL 175
>gi|158423629|ref|YP_001524921.1| transcriptional regulator [Azorhizobium caulinodans ORS 571]
gi|158330518|dbj|BAF88003.1| transcriptional regulator [Azorhizobium caulinodans ORS 571]
Length = 311
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 107/193 (55%), Gaps = 15/193 (7%)
Query: 121 ALERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLG 180
LER E E E + V ++GAPNAGKS++ N +VGTKV+ VS K TT V G
Sbjct: 3 GLERAEAE----GAEPTRCGFVALLGAPNAGKSTLTNQLVGTKVSIVSHKVQTTRAIVRG 58
Query: 181 VMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPD 240
+ + +Q+ + DTPG+ K + V +AW++ + +V+ ++ D +R + D
Sbjct: 59 IALEGPSQVILVDTPGIFSPKRRLE----RAMVNTAWTSASDADVVALLVDANRGI---D 111
Query: 241 SRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKG 300
V +++ + A K+ R L +NK+D++ ++ LL++A++ +ER+FM S LKG
Sbjct: 112 ENVESILKPL---AEVKRPRALILNKIDMI-RRDTLLELAQKLTERLSFERVFMVSALKG 167
Query: 301 AGLKALTQYLMEQ 313
G+ + + E+
Sbjct: 168 DGVDDVRTWFAEK 180
>gi|403530335|ref|YP_006664864.1| GTP-binding protein Era [Bartonella quintana RM-11]
gi|403232407|gb|AFR26150.1| GTP-binding protein Era [Bartonella quintana RM-11]
Length = 301
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 94/174 (54%), Gaps = 13/174 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG PNAGKS+++N +VGTKV+ V+ K TT V G++ +TQI + DTPG+
Sbjct: 8 RSGFVVLIGMPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLVRGIVIHDNTQIVLIDTPGV 67
Query: 198 MLNKSGYSHKDV-KVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
HK + + V +AW +VL+V+ D H L+ ++ ++E +
Sbjct: 68 F-----RPHKRLERAMVSAAWGGAKSADVLLVLIDAHNGLSDEVCTMLDIVENI------ 116
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
KQ ++L +NK+D V K LL + Q + + FM S L G+G K L L
Sbjct: 117 KQDKILVLNKIDTVAKLS-LLALTSQINERVKFLQTFMISALNGSGCKDLLHAL 169
>gi|319405459|emb|CBI79078.1| GTP-binding protein Era [Bartonella sp. AR 15-3]
Length = 300
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 13/174 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG PNAGKS+++N +VGTKV+ V+ K TT V G++ TQI + DTPG+
Sbjct: 8 RSGFVALIGVPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLVRGIVIYDKTQIILIDTPGV 67
Query: 198 MLNKSGYSHKDV-KVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
HK + + V +AW ++L+V+ DV L+ S ++ +++ +
Sbjct: 68 F-----RPHKRLERAMVSAAWGGAKNADILLVLIDVQSGLSDEVSAMLDILKSV------ 116
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+Q ++L +NK+D V K LL + Q + + FM S L G+G K L YL
Sbjct: 117 EQDKILVLNKIDTVVKSS-LLALTAQVNEQVNFLQTFMISALNGSGCKDLLHYL 169
>gi|159184589|ref|NP_354059.2| GTP-binding protein, Era family [Agrobacterium fabrum str. C58]
gi|159139891|gb|AAK86844.2| GTP-binding protein, Era family [Agrobacterium fabrum str. C58]
Length = 313
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG NAGKS+++N +VG KV+ VS K TT + G+ + QI DTPG+
Sbjct: 19 RSGFVALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAVMRGIAIHKNAQIVFMDTPGI 78
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + V SAW ++++++ D R L ++ + K P
Sbjct: 79 FKPRRRLD----RAMVTSAWGGAKDADLILLLIDSERGLKGDAEAILEGL----KDVP-- 128
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
QK++LC+NK+D V K++DLLK+A ++R FM S G+G + L YL+E
Sbjct: 129 QKKILCLNKIDQV-KREDLLKLAAAANEKVAFDRTFMISATNGSGCEDLMDYLVETL 184
>gi|335034163|ref|ZP_08527524.1| GTP-binding protein, era-like protein [Agrobacterium sp. ATCC
31749]
gi|333794481|gb|EGL65817.1| GTP-binding protein, era-like protein [Agrobacterium sp. ATCC
31749]
Length = 316
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG NAGKS+++N +VG KV+ VS K TT + G+ + QI DTPG+
Sbjct: 22 RSGFVALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAVMRGIAIHKNAQIVFMDTPGI 81
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + V SAW ++++++ D R L ++ + K P
Sbjct: 82 FKPRRRLD----RAMVTSAWGGAKDADLILLLIDSERGLKGDAEAILEGL----KDVP-- 131
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
QK++LC+NK+D V K++DLLK+A ++R FM S G+G + L YL+E
Sbjct: 132 QKKILCLNKIDQV-KREDLLKLAAAANEKVAFDRTFMISATNGSGCEDLMDYLVETL 187
>gi|49474067|ref|YP_032109.1| GTP-binding protein Era [Bartonella quintana str. Toulouse]
gi|49239571|emb|CAF25928.1| GTP-binding protein era homolog [Bartonella quintana str. Toulouse]
Length = 301
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 94/174 (54%), Gaps = 13/174 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG PNAGKS+++N +VGTKV+ V+ K TT V G++ +TQI + DTPG+
Sbjct: 8 RSGFVVLIGMPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLVRGIVIHDNTQIVLIDTPGV 67
Query: 198 MLNKSGYSHKDV-KVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
HK + + V +AW +VL+V+ D H L+ ++ ++E +
Sbjct: 68 F-----RPHKRLERAMVSAAWGGAKSADVLLVLIDAHSGLSDEVCTMLDIVENI------ 116
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
KQ ++L +NK+D V K LL + Q + + FM S L G+G K L L
Sbjct: 117 KQDKILVLNKIDTVAKLS-LLALTAQINERVKFLQTFMISALSGSGCKDLLHAL 169
>gi|25008423|sp|Q8UGK1.1|ERA_AGRT5 RecName: Full=GTPase Era
Length = 317
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG NAGKS+++N +VG KV+ VS K TT + G+ + QI DTPG+
Sbjct: 23 RSGFVALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAVMRGIAIHKNAQIVFMDTPGI 82
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + V SAW ++++++ D R L ++ + K P
Sbjct: 83 FKPRRRLD----RAMVTSAWGGAKDADLILLLIDSERGLKGDAEAILEGL----KDVP-- 132
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
QK++LC+NK+D V K++DLLK+A ++R FM S G+G + L YL+E
Sbjct: 133 QKKILCLNKIDQV-KREDLLKLAAAANEKVAFDRTFMISATNGSGCEDLMDYLVETL 188
>gi|115525027|ref|YP_781938.1| GTP-binding protein Era [Rhodopseudomonas palustris BisA53]
gi|115518974|gb|ABJ06958.1| GTP-binding protein Era [Rhodopseudomonas palustris BisA53]
Length = 313
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VSRK TT + G++ QI + DTPG+ + K
Sbjct: 23 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIDNKAQIILVDTPGIFMPK 82
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D + D L+E++ K PK +
Sbjct: 83 RRLD----RAMVNTAWSGAHDADLVCVLLDARAGI---DEEADALLEKVAKVGHPK---I 132
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NKVD+V+K+K LLK+A+ ++ FM S L G G+ L L
Sbjct: 133 LVINKVDIVSKEK-LLKLAQDANARLTFDETFMVSALSGDGVADLRHAL 180
>gi|217977174|ref|YP_002361321.1| GTP-binding protein Era [Methylocella silvestris BL2]
gi|217502550|gb|ACK49959.1| GTP-binding protein Era [Methylocella silvestris BL2]
Length = 310
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 91/169 (53%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPNAGKS++IN +VG KV+ VSRK TT +V G+ + D QI DTPG+ +
Sbjct: 21 VALIGAPNAGKSTLINQLVGAKVSIVSRKAQTTRAQVRGIAIEGDAQIIFVDTPGIFAPR 80
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW + + ++ D + L D V ++ R+ A + ++
Sbjct: 81 RRLD----RAMVTSAWGGAGDADAVALLVDARKGL---DEDVEAILARL---ADVRAAKI 130
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V K LL +A QF ++ FM S L+G G++ + + L
Sbjct: 131 LVINKIDTVEPPK-LLDIAAQFNDRLAFDHTFMISALRGYGVETMRRQL 178
>gi|83311358|ref|YP_421622.1| GTP-binding protein Era [Magnetospirillum magneticum AMB-1]
gi|82946199|dbj|BAE51063.1| GTPase [Magnetospirillum magneticum AMB-1]
Length = 303
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
EV E +Q+ V ++GAPNAGKS+++N +VGTKV+ VS K TT V+G+ + Q+
Sbjct: 3 EVPETEQRCGFVAVVGAPNAGKSTLVNALVGTKVSIVSPKVQTTRFRVMGIAMVGEAQVV 62
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM 250
+ DTPG+ K + V +AW N + + ++ D + +SR I +
Sbjct: 63 LVDTPGIFAPKKRLE----RAMVAAAWGGTNDADHICLLIDAAKGYDD-ESRAI-----V 112
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K K++ +L +NKVDLV + K LL + Q + +FM S LKG G+ L +L
Sbjct: 113 DKLKETKRQAILVLNKVDLVKRDK-LLGLTAQLDAEGIFTDVFMISALKGDGIADLLAHL 171
>gi|402496660|ref|YP_006555920.1| GTP-binding protein Era [Wolbachia endosymbiont of Onchocerca
ochengi]
gi|398649933|emb|CCF78103.1| GTP-binding protein Era [Wolbachia endosymbiont of Onchocerca
ochengi]
Length = 294
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 99/176 (56%), Gaps = 9/176 (5%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QK + V I G PNAGKS++IN +VG K+A V+ K TT ++ G+ +TQI D+PG
Sbjct: 4 QKCLFVTIAGLPNAGKSTLINSIVGRKIAIVTPKVQTTRTQIKGITIFNETQIIFTDSPG 63
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ L + K K V+SAWSA+ ++ +++ DV + S + I++I +
Sbjct: 64 IFLAGT----KLEKALVKSAWSAIKSDDITLLLVDVSNYFKSMER--IKII--FTQLQHT 115
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
K + +L +NKVDLV KK ++ + L +E+IF+ S LK GL L YL E
Sbjct: 116 KARCILVINKVDLV-KKPEIKMACKDLSLLYRFEKIFVISALKSNGLSNLMNYLSE 170
>gi|395491431|ref|ZP_10423010.1| GTPase Era [Sphingomonas sp. PAMC 26617]
gi|404255284|ref|ZP_10959252.1| GTPase Era [Sphingomonas sp. PAMC 26621]
Length = 298
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 92/175 (52%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
DQK V ++GAPNAGKS+++N +VG KVA VS K TT ++GV + DTQ+ + DTP
Sbjct: 3 DQKCGLVAVLGAPNAGKSTLVNALVGQKVAIVSPKAQTTRVRLMGVAIEGDTQLLLVDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K + + V++AW +VL +V D L + + + I K P
Sbjct: 63 GIFEPKRRFD----RAMVQAAWGGAEGADVLALVVDAKGGLPTKVTDIATAI----KDRP 114
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ + L +NKVDL K K LL AE+ L ++ F S G GL L +L
Sbjct: 115 --EPKYLILNKVDLADKAKLLLH-AERLNGLVAFDETFFVSASTGDGLPELKAHL 166
>gi|84500560|ref|ZP_00998809.1| GTP-binding protein Era [Oceanicola batsensis HTCC2597]
gi|84391513|gb|EAQ03845.1| GTP-binding protein Era [Oceanicola batsensis HTCC2597]
Length = 301
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 94/169 (55%), Gaps = 9/169 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS++ N MVG KV+ V+ K TT + GV + D+QI DTPGL +
Sbjct: 8 VALIGEPNAGKSTLTNRMVGAKVSIVTHKVQTTRARIRGVAIEGDSQIVFVDTPGLFQPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS V ++ +++ + HR +T +++ +++M K ++
Sbjct: 68 RRLD----RAMVAAAWSGVADADLTVLLVEAHRGVTPGVEKILETLQQMAK----GRRVA 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V + K LL + E+ +E+ FM S KG G++ L ++L
Sbjct: 120 LAINKIDRV-EAKQLLDLTERLNAAYPFEKTFMISAEKGHGVQDLKEWL 167
>gi|344923434|ref|ZP_08776895.1| GTPase Era [Candidatus Odyssella thessalonicensis L13]
Length = 294
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 92/172 (53%), Gaps = 13/172 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ +IG PNAGKS++IN +VG KV+ VS K TT VLG+ Q+ + DTPG+ K
Sbjct: 7 IAVIGVPNAGKSTLINQLVGQKVSIVSPKVQTTRQRVLGIAMVDQAQLVLIDTPGIFTPK 66
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW A + ++++ D + SP +++ +E ++ V
Sbjct: 67 KRLD----RAMVATAWEAGKEADQIILIVDASQKNQSPSEQILASLE--------NRQIV 114
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
L +NKVD V K + LLK+AE ++ + IFM S L G G+ L YL ++
Sbjct: 115 LVLNKVDAVDKTR-LLKLAESYQRYTQVKDIFMVSALTGDGVSDLAAYLADK 165
>gi|218530504|ref|YP_002421320.1| GTP-binding protein Era [Methylobacterium extorquens CM4]
gi|240138863|ref|YP_002963338.1| GTP-binding protein [Methylobacterium extorquens AM1]
gi|418058989|ref|ZP_12696950.1| GTP-binding protein Era-like-protein [Methylobacterium extorquens
DSM 13060]
gi|218522807|gb|ACK83392.1| GTP-binding protein Era [Methylobacterium extorquens CM4]
gi|240008835|gb|ACS40061.1| GTP-binding protein [Methylobacterium extorquens AM1]
gi|373567496|gb|EHP93464.1| GTP-binding protein Era-like-protein [Methylobacterium extorquens
DSM 13060]
Length = 326
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 104/191 (54%), Gaps = 11/191 (5%)
Query: 120 AALERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVL 179
A + Q ++ + E+ ++ V +IG PNAGKS+++N +VG KV+ VSRK TT V
Sbjct: 14 GAPQEQRQDAQGQPREETRAGFVALIGVPNAGKSTLLNALVGAKVSIVSRKVQTTRALVR 73
Query: 180 GVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSP 239
G++ + + QI + DTPG+ K + V SAWS + + ++ D + +
Sbjct: 74 GIVMEGNAQIVLVDTPGIFAPKRRLD----RAMVHSAWSGAADADAICLLIDARKGV--- 126
Query: 240 DSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLK 299
D V ++ R+ + PK +L +NK+DL+ +++ LL++ + + +E F+ S LK
Sbjct: 127 DEEVETILRRLPEVKRPK---ILILNKIDLIARER-LLELVAKLNAMVPFEDTFLISALK 182
Query: 300 GAGLKALTQYL 310
G G+ L + L
Sbjct: 183 GDGIADLRKAL 193
>gi|121602370|ref|YP_988790.1| GTP-binding protein Era [Bartonella bacilliformis KC583]
gi|421760595|ref|ZP_16197411.1| GTPase Era [Bartonella bacilliformis INS]
gi|120614547|gb|ABM45148.1| GTP-binding protein Era [Bartonella bacilliformis KC583]
gi|411175012|gb|EKS45039.1| GTPase Era [Bartonella bacilliformis INS]
Length = 301
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 89/169 (52%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++G PNAGKS+++N +VGTKV+ V+ K TT V G++ TQI + DTPG+ +
Sbjct: 12 VSLVGVPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIVIHEKTQIVLVDTPGIFRPR 71
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + + L+V+ DV L+ + + + A KQ ++
Sbjct: 72 KRLE----RAMVSAAWSGIRDADALLVLIDVQNGLSDEVNAM------LDNLANIKQDKI 121
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V K LL + + + R FM S L G+G K L YL
Sbjct: 122 LVLNKIDTVAKSS-LLALTAKINERVNFLRTFMISALNGSGCKDLLDYL 169
>gi|404320757|ref|ZP_10968690.1| GTPase Era [Ochrobactrum anthropi CTS-325]
Length = 311
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 94/175 (53%), Gaps = 11/175 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IGAPNAGKS+++N +VGTKV+ V+ K TT V G+ + QI + DTPG+
Sbjct: 18 RSGFVALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEDQAQIVLVDTPGI 77
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K + V +AW ++++V+ D L ++ ++ + +
Sbjct: 78 FRPKRRLD----RAMVTTAWGGAKDADIILVLLDSQGGLNENAEALLSSMKDV------R 127
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
QK+VL +NKVD V LL +A + L +++ FM S L G+G K L +YL E
Sbjct: 128 QKKVLVLNKVDRVDPPV-LLDLARKANELVAFDQTFMISALNGSGCKDLAKYLAE 181
>gi|163867993|ref|YP_001609197.1| GTP-binding protein Era [Bartonella tribocorum CIP 105476]
gi|161017644|emb|CAK01202.1| GTP-binding protein Era [Bartonella tribocorum CIP 105476]
Length = 303
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 94/175 (53%), Gaps = 13/175 (7%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
++S V +IG PNAGKS+++N +VGTKV+ V+ K TT + G++ D QI + DTPG
Sbjct: 9 RRSGFVVLIGMPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLIRGIVIHDDVQIVLVDTPG 68
Query: 197 LMLNKSGYSHKDV-KVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
+ HK + + V +AW +VL+V+ D L+ R++ ++ M
Sbjct: 69 VF-----RPHKRLERAMVSAAWGGAKSADVLLVLIDAQSGLSDEVDRMLDIVNTM----- 118
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
KQ++VL +NKVD V K LL + + + + FM S L G+G K L L
Sbjct: 119 -KQEKVLVLNKVDTVVKSS-LLALTTKINERVKFAQTFMISALNGSGCKDLLHAL 171
>gi|380030439|ref|XP_003698856.1| PREDICTED: GTPase Era, mitochondrial-like [Apis florea]
Length = 345
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 108/199 (54%), Gaps = 9/199 (4%)
Query: 119 QAALERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEV 178
Q + + + E+ +E++K + V I+G PNAGKS+++N ++G + S K +TT H+
Sbjct: 33 QENITSKLNHKSELYQENKKLLKVAILGLPNAGKSTLVNKLIGRSICPTSSKVHTTMHKA 92
Query: 179 LGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTS 238
+ T+ +TQI DTPGL+L+ ++K +K E +A+ +V+ ++ DV T
Sbjct: 93 EAIYTEGNTQIIFMDTPGLVLSNEIKTYKLLKTFSEDPKNAITNADVIGIIQDVTNVYTR 152
Query: 239 P--DSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKK---DLLKVAEQFKHLPGYERIF 293
++ V+ I+ + P ++ NKVD + KK+ DL ++ + P ++ IF
Sbjct: 153 YKFENFVLNYIKNKMEDTP----LLMIFNKVDKLKKKEVLLDLTRILTNNNNYPKFDDIF 208
Query: 294 MTSGLKGAGLKALTQYLME 312
M S L G G+ L YL++
Sbjct: 209 MISALNGDGVDDLRNYLLD 227
>gi|294893594|ref|XP_002774550.1| GTP-binding protein era, putative [Perkinsus marinus ATCC 50983]
gi|239879943|gb|EER06366.1| GTP-binding protein era, putative [Perkinsus marinus ATCC 50983]
Length = 422
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 33/208 (15%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E K + V +IGAPNAGKSS++N M+ +AAVS K NTT E+ GV+T D QI + D
Sbjct: 81 EKPKFLKVALIGAPNAGKSSLMNCMLNQSLAAVSPKVNTTREEIRGVVTDGDHQIVVIDA 140
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMG--- 251
PG++ K + AW+ N +++++V D R PD ++ LI R+
Sbjct: 141 PGVI---PANQTKSCRALARDAWTGYNDCDLVLLVVDTLRR---PDMDLVDLIRRIAPKP 194
Query: 252 -----------------------KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPG 288
+++ + VLC+NK+D +++ + K A+Q K
Sbjct: 195 DLSTEYHERRNPDLKQSAAVDEERESDKRPPVVLCLNKIDK-SQRLWVQKRADQLKEHGA 253
Query: 289 YERIFMTSGLKGAGLKALTQYLMEQFKD 316
+++IF S K G+KAL +L + K+
Sbjct: 254 FKQIFFISAKKDRGVKALLHFLKTRSKE 281
>gi|353328059|ref|ZP_08970386.1| GTPase Era [Wolbachia endosymbiont wVitB of Nasonia vitripennis]
Length = 294
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 99/176 (56%), Gaps = 9/176 (5%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
+++K + V I G PNAGKS++IN +VG K+A V+ K TT +V GV + QI D+
Sbjct: 2 KEEKCLFVTIAGLPNAGKSTLINSIVGKKIAIVTPKVQTTRTQVRGVAICNNAQIVFTDS 61
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ ++ K V+SAW AV ++ +++ DV+ +L + + R+ + R+ +
Sbjct: 62 PGVFSAETNLE----KALVKSAWGAVKDSDITLLLVDVNNYLKNIE-RIKTIFARLERT- 115
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K + +L +NK DLV KK +L E L +E+IF S LK GL LT YL
Sbjct: 116 --KGRCILVINKTDLV-KKSELKMAHEHLNLLYKFEKIFTISALKNDGLSDLTSYL 168
>gi|319408284|emb|CBI81937.1| GTP-binding protein Era [Bartonella schoenbuchensis R1]
Length = 303
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N +VGTKV+ V+ K TT V G++ +TQI + DTPG+
Sbjct: 14 VALIGVPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLVRGIVIYENTQIVLIDTPGVFRPH 73
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
H V +AW ++L+++ DV L+ ++ ++E + KQ ++
Sbjct: 74 KRLEHA----MVSAAWGGARGADILLILIDVQNGLSDEVDAMLNVLENI------KQDKI 123
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V + LL + + + + FM S L G+G K L YL
Sbjct: 124 LVLNKIDTVARTS-LLALTAKINERMKFLQTFMISALNGSGCKDLLHYL 171
>gi|256369100|ref|YP_003106608.1| GTP-binding protein Era [Brucella microti CCM 4915]
gi|255999260|gb|ACU47659.1| GTP-binding protein Era [Brucella microti CCM 4915]
Length = 311
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 95/182 (52%), Gaps = 11/182 (6%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
E + +S V +IGAPNAGKS+++N +VGTKV+ V+ K TT V G+ + I
Sbjct: 11 ETEATQTRSGFVALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEGPALIV 70
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM 250
+ DTPG+ K + V +AW ++++V+ D + L+E M
Sbjct: 71 LVDTPGIFRPKRRLD----RAMVTTAWGGAKDADIILVIIDAQGGF---NENAEALLESM 123
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+QK+VL +NKVD V LL +A++ L ++R FM S L G+G K L +YL
Sbjct: 124 KDV---RQKKVLVLNKVDRVDPPV-LLSLAQKANELVPFDRTFMISALNGSGCKDLAKYL 179
Query: 311 ME 312
E
Sbjct: 180 AE 181
>gi|83593186|ref|YP_426938.1| GTP-binding protein Era [Rhodospirillum rubrum ATCC 11170]
gi|386349918|ref|YP_006048166.1| GTPase Era [Rhodospirillum rubrum F11]
gi|83576100|gb|ABC22651.1| GTP-binding protein Era [Rhodospirillum rubrum ATCC 11170]
gi|346718354|gb|AEO48369.1| GTPase Era [Rhodospirillum rubrum F11]
Length = 309
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 96/172 (55%), Gaps = 11/172 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPNAGKS+++N +VG+KV VS K TT V G+ + Q+ DTPG+ +
Sbjct: 20 VAVIGAPNAGKSTLVNRLVGSKVTIVSPKVQTTRSRVRGIAMVGEAQVVFVDTPGIFQPR 79
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ + V +AW +++++V D H+ +T+ ++ ++ G++A +
Sbjct: 80 KRFD----RAMVAAAWEGALEADLVLLVIDAHKGITAEVEEILTKLKATGRRA------L 129
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
L +NKVD + + + LL++A + +E++FM S L G+G + +L E+
Sbjct: 130 LALNKVDALERSR-LLEMASRLDAALPFEKVFMISALTGSGCDDVLAWLAER 180
>gi|170749854|ref|YP_001756114.1| GTP-binding protein Era [Methylobacterium radiotolerans JCM 2831]
gi|170656376|gb|ACB25431.1| GTP-binding protein Era [Methylobacterium radiotolerans JCM 2831]
Length = 332
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 98/175 (56%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D ++ V +IG PNAGKS+++N +VGTKV+ VSRK TT V G++ + Q+ + DTP
Sbjct: 36 DARAGFVALIGVPNAGKSTLLNNLVGTKVSIVSRKVQTTRALVRGILIEGSAQVVLVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K + V SAWS + + ++ D + + D+ V ++ R+G+
Sbjct: 96 GIFAPKRRLD----RAMVHSAWSGAADADAVCLLVDARKGV---DAEVEAVLGRLGEV-- 146
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K++++L +NK+DL+ +++ LL +A + + FM S L G G+ L + L
Sbjct: 147 -KREKLLILNKIDLIPRER-LLDLAAKLNAAAPFAETFMISALNGDGVADLRRAL 199
>gi|407974585|ref|ZP_11155494.1| GTPase Era [Nitratireductor indicus C115]
gi|407430274|gb|EKF42949.1| GTPase Era [Nitratireductor indicus C115]
Length = 309
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E +S V +IGAPNAGKS+++N +VG KV+ V+ K TT + G+ T TQI DT
Sbjct: 13 EKTRSGFVALIGAPNAGKSTLLNQLVGAKVSIVTHKVQTTRAIIRGIATHEQTQIVFIDT 72
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ + + V +AW +++ + D R + D+ I +ER+ + A
Sbjct: 73 PGIFNPRRRLD----RAMVTTAWGGAKDADIVAFLIDAERGIKG-DAEAI--LERLSEVA 125
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
PK +L +NK+D V K++ LL++A +ER FM S L G+G + L YL E+
Sbjct: 126 QPK---LLILNKIDRV-KRETLLELAAIANGKVDFERTFMISALNGSGCEDLLAYLGERL 181
>gi|90424140|ref|YP_532510.1| GTP-binding protein Era [Rhodopseudomonas palustris BisB18]
gi|90106154|gb|ABD88191.1| GTP-binding protein Era [Rhodopseudomonas palustris BisB18]
Length = 320
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 106/194 (54%), Gaps = 11/194 (5%)
Query: 117 LLQAALERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTH 176
+L +E +++ E + + V +IGAPN GKS+++N +VG+KV VSRK TT
Sbjct: 5 VLNDHVESEQDAESAAGPVETRCGFVALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRA 64
Query: 177 EVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHL 236
+ G++ + QI + DTPG+ L K + V++AWS + +++ V+ D +
Sbjct: 65 LIRGIVIEDHAQIILVDTPGIFLPKRRLD----RAMVKTAWSGAHDADLVCVLLDAREGI 120
Query: 237 TSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTS 296
D ++ ++ + PK +L +NKVD+V+K+K LLK+A+ ++ FM S
Sbjct: 121 ---DEEADAILTKLSQVNHPK---ILVINKVDIVSKEK-LLKLAQSANERLKFDETFMVS 173
Query: 297 GLKGAGLKALTQYL 310
L G G++ L + L
Sbjct: 174 ALSGDGVEDLRKSL 187
>gi|150395907|ref|YP_001326374.1| GTP-binding protein Era [Sinorhizobium medicae WSM419]
gi|189037667|sp|A6U7A9.1|ERA_SINMW RecName: Full=GTPase Era
gi|150027422|gb|ABR59539.1| GTP-binding protein Era [Sinorhizobium medicae WSM419]
Length = 310
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IGA NAGKS++IN +VG KV+ VS K TT V G+ + QI DTPG+
Sbjct: 17 RSGFVALIGATNAGKSTLINRLVGAKVSIVSHKVQTTRAIVRGIAIHDNAQIVFMDTPGI 76
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + V +AW +++M++ D R + ++ ++ +
Sbjct: 77 FKPRRRLD----RAMVTTAWGGAKDADLIMLLIDSERGIKGDADTILEGLKDV------H 126
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
Q +VL +NKVD V +++DLLK+A + +ER FM S L G+G + + YL E+
Sbjct: 127 QPKVLVLNKVDQV-RREDLLKLAAAANEVVAFERTFMISALTGSGCEDVMDYLAERL 182
>gi|417860529|ref|ZP_12505585.1| GTP-binding protein [Agrobacterium tumefaciens F2]
gi|338823593|gb|EGP57561.1| GTP-binding protein [Agrobacterium tumefaciens F2]
Length = 316
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 11/173 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N +VG KV+ VS K TT + G+ + QI DTPG+ +
Sbjct: 26 VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAVMRGIAIHKNAQIVFMDTPGIFKPR 85
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW ++++++ D R L ++ + K P QK++
Sbjct: 86 RRLD----RAMVTSAWGGAKDADLILLLIDSERGLKGDAEAILEGL----KDVP--QKKI 135
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
LC+NK+D V K++DLLK+A ++R FM S G+G + L YL++
Sbjct: 136 LCLNKIDQV-KREDLLKLAAAANETVAFDRTFMISATNGSGCEDLMDYLVDAL 187
>gi|390449880|ref|ZP_10235480.1| GTPase Era [Nitratireductor aquibiodomus RA22]
gi|389663453|gb|EIM74982.1| GTPase Era [Nitratireductor aquibiodomus RA22]
Length = 308
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 96/175 (54%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ +S V +IGAPNAGKS+++N +VG KV+ V+ K TT V G+ T + QI DTP
Sbjct: 13 ETRSGFVALIGAPNAGKSTLLNQLVGAKVSIVTHKVQTTRAIVRGIATHENAQIVFIDTP 72
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + + V +AW +++ ++ D R + D+ I +E++ A
Sbjct: 73 GIFNPRRTLD----RAMVTTAWGGAKDADIVALLIDAERGIKG-DAAAI--LEKLRDVAQ 125
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
PK +L +NK+D V K+ LL++A + G+ER FM S L+GAG L +L
Sbjct: 126 PK---ILILNKIDRV-KRDSLLELAARANEAVGFERTFMISALQGAGCDDLLAHL 176
>gi|408787773|ref|ZP_11199500.1| GTPase Era [Rhizobium lupini HPC(L)]
gi|424909919|ref|ZP_18333296.1| GTP-binding protein Era [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392845950|gb|EJA98472.1| GTP-binding protein Era [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|408486394|gb|EKJ94721.1| GTPase Era [Rhizobium lupini HPC(L)]
Length = 313
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG NAGKS+++N +VG KV+ VS K TT + G+ + QI DTPG+
Sbjct: 19 RSGFVALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAVMRGIAIHDNAQIVFMDTPGI 78
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + V SAW ++++++ D R L ++ + K P
Sbjct: 79 FKPRRRLD----RAMVTSAWGGAKDADLILLLIDSERGLKGDAEAILEGL----KDVP-- 128
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
QK++LC+NK+D V K++DLLK+A ++R FM S G+G + L YL +
Sbjct: 129 QKKILCLNKIDQV-KREDLLKLAAAANETVAFDRTFMISATNGSGCEDLMNYLAAEL 184
>gi|239831497|ref|ZP_04679826.1| GTP-binding protein Era [Ochrobactrum intermedium LMG 3301]
gi|444311651|ref|ZP_21147255.1| GTPase Era [Ochrobactrum intermedium M86]
gi|239823764|gb|EEQ95332.1| GTP-binding protein Era [Ochrobactrum intermedium LMG 3301]
gi|443484981|gb|ELT47779.1| GTPase Era [Ochrobactrum intermedium M86]
Length = 311
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 94/175 (53%), Gaps = 11/175 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IGAPNAGKS+++N +VGTKV+ V+ K TT V G+ + QI + DTPG+
Sbjct: 18 RSGFVALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEGPAQIVLVDTPGI 77
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K + V +AW ++++V+ D L ++ ++ + +
Sbjct: 78 FRPKRRLD----RAMVTTAWGGAKDADIILVLLDSQGGLNENAEALLSSMKDV------R 127
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
QK+VL +NKVD V LL +A + L +++ FM S L G+G K L +YL +
Sbjct: 128 QKKVLVLNKVDRVDPPV-LLDLARKANELVAFDQTFMVSALNGSGCKDLAKYLAD 181
>gi|357384165|ref|YP_004898889.1| GTP-binding protein Era [Pelagibacterium halotolerans B2]
gi|351592802|gb|AEQ51139.1| GTP-binding protein Era [Pelagibacterium halotolerans B2]
Length = 303
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 98/172 (56%), Gaps = 11/172 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++GAPNAGKS+++N +VGTKV+ V+ K TT +V GV+T ++Q+ DTPG+ K
Sbjct: 14 VALVGAPNAGKSTLLNSLVGTKVSIVTHKAQTTRAQVRGVLTIEESQLVFIDTPGIFAPK 73
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V+SAW+ +++ ++ D + L ++ V L+E + PK V
Sbjct: 74 RRLD----RAMVQSAWTGAGDADMVALIVDAQKGL---NAEVESLLEGLDNIRQPK---V 123
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
L +NK+D V K +DLL ++++ +E FM S L+G G+ ++ E+
Sbjct: 124 LVINKIDKV-KHEDLLGLSKKINEKVNFETTFMISALRGHGVADFVEWCREK 174
>gi|163851698|ref|YP_001639741.1| GTP-binding protein Era [Methylobacterium extorquens PA1]
gi|163663303|gb|ABY30670.1| GTP-binding protein Era [Methylobacterium extorquens PA1]
Length = 326
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 103/191 (53%), Gaps = 11/191 (5%)
Query: 120 AALERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVL 179
A + Q ++ + E+ ++ V +IG PNAGKS+++N +VG KV+ VSRK TT V
Sbjct: 14 GAPQEQRQDAQGQPREETRAGFVALIGVPNAGKSTLLNALVGAKVSIVSRKVQTTRALVR 73
Query: 180 GVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSP 239
G++ + + QI + DTPG+ K + V SAWS + + ++ D +
Sbjct: 74 GIVMEGNAQIVLVDTPGIFAPKRRLD----RAMVHSAWSGAADADAVCLLIDARK---GA 126
Query: 240 DSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLK 299
D V ++ R+ + PK +L +NK+DL+ +++ LL++ + + +E F+ S LK
Sbjct: 127 DEEVETILRRLPEVKRPK---ILILNKIDLIARER-LLELVAKLNAMVPFEDTFLISALK 182
Query: 300 GAGLKALTQYL 310
G G+ L + L
Sbjct: 183 GDGIADLRKAL 193
>gi|294084099|ref|YP_003550857.1| GTP-binding protein Era [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663672|gb|ADE38773.1| GTP-binding protein Era [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 303
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 95/177 (53%), Gaps = 10/177 (5%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
K+ V +IGAPNAGKS+++N MVG KV+ V+ K TT V G+ + QI DTPG+
Sbjct: 9 KAGFVALIGAPNAGKSTLMNAMVGQKVSIVTPKVQTTRSRVRGIAMQGTAQIIFVDTPGI 68
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K + V++AW +VL+++ D R D+ + +IE++ K
Sbjct: 69 FTPKRRLD----RAMVQAAWQGAEDGDVLLLLHDCARREIDQDT--LNIIEKLKKSG--- 119
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
+K L +NK+DL +++ LL+ A+ L +ERIFM S G G+ L +L +
Sbjct: 120 RKASLVLNKIDLPPQER-LLERADAMSKLYDFERIFMVSAETGNGIDDLKTWLADHM 175
>gi|254561470|ref|YP_003068565.1| GTP-binding protein [Methylobacterium extorquens DM4]
gi|254268748|emb|CAX24709.1| GTP-binding protein [Methylobacterium extorquens DM4]
Length = 326
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 103/191 (53%), Gaps = 11/191 (5%)
Query: 120 AALERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVL 179
A + Q ++ + E+ ++ V +IG PNAGKS+++N +VG KV+ VSRK TT V
Sbjct: 14 GAPQEQRQDAQGQPREETRAGFVALIGVPNAGKSTLLNALVGAKVSIVSRKVQTTRALVR 73
Query: 180 GVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSP 239
G++ + QI + DTPG+ K + V SAWS + + ++ D + +
Sbjct: 74 GIVMEGHAQIVLVDTPGIFAPKRRLD----RAMVHSAWSGAADADAICLLIDARKGV--- 126
Query: 240 DSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLK 299
D V ++ R+ + PK +L +NK+DL+ +++ LL++ + + +E F+ S LK
Sbjct: 127 DEEVETILRRLPEVKRPK---ILILNKIDLIARER-LLELVAKLNAMVPFEDTFLISALK 182
Query: 300 GAGLKALTQYL 310
G G+ L + L
Sbjct: 183 GDGIADLRKAL 193
>gi|395778397|ref|ZP_10458909.1| GTPase Era [Bartonella elizabethae Re6043vi]
gi|423715292|ref|ZP_17689516.1| GTPase Era [Bartonella elizabethae F9251]
gi|395417605|gb|EJF83942.1| GTPase Era [Bartonella elizabethae Re6043vi]
gi|395430128|gb|EJF96179.1| GTPase Era [Bartonella elizabethae F9251]
Length = 301
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 92/174 (52%), Gaps = 13/174 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG PNAGKS+++N +VGTKV+ V+ K TT + G++ D QI + DTPG+
Sbjct: 8 RSGFVVLIGMPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLIRGIVIHDDVQIVLVDTPGV 67
Query: 198 MLNKSGYSHKDV-KVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
HK + + V +AW +VL+V+ D L+ ++ ++ M
Sbjct: 68 F-----RPHKRLERAMVSTAWGGAKSADVLLVLIDAQSGLSDEVEMMLDIVNTM------ 116
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
KQ++VL +NKVD V K LL + Q + + FM S L G+G K L L
Sbjct: 117 KQEKVLVLNKVDTVVKSS-LLALTTQINERVKFAQTFMISALNGSGCKDLLHAL 169
>gi|153009953|ref|YP_001371168.1| GTP-binding protein Era [Ochrobactrum anthropi ATCC 49188]
gi|151561841|gb|ABS15339.1| GTP-binding protein Era [Ochrobactrum anthropi ATCC 49188]
Length = 311
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 95/175 (54%), Gaps = 11/175 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IGAPNAGKS+++N +VGTKV+ V+ K TT V G+ + QI + DTPG+
Sbjct: 18 RSGFVALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEDQAQIVLVDTPGI 77
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K + V +AW ++++V+ D L ++ ++ + +
Sbjct: 78 FRPKRRLD----RAMVTTAWGGAKDADIILVLLDSQGGLNENAEALLSSMKDV------R 127
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
+K+VL +NKVD V LL++A + L +++ FM S L G+G K L +YL E
Sbjct: 128 RKKVLVLNKVDRVDPPV-LLELARKANELVAFDQTFMISALNGSGCKDLAKYLAE 181
>gi|373450829|ref|ZP_09542788.1| GTP-binding protein, with GTPase activity [Wolbachia pipientis
wAlbB]
gi|371931967|emb|CCE77801.1| GTP-binding protein, with GTPase activity [Wolbachia pipientis
wAlbB]
Length = 294
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 98/178 (55%), Gaps = 9/178 (5%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
+++K + V I G PNAGKS++IN +VG K+A V+ K TT +V GV + QI D+
Sbjct: 2 KEEKCLFVTIAGLPNAGKSTLINSIVGKKIAIVTPKVQTTRTQVRGVAVCNNAQIVFTDS 61
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ ++ K V+SAW AV ++ +++ DV+ +L + + R+ + R+
Sbjct: 62 PGVFSAETNLE----KALVKSAWGAVKDSDITLLLVDVNNYLKNIE-RIKTIFARLEHT- 115
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
K + +L +NK DLV KK +L E L +E+IF S LK GL L YL E
Sbjct: 116 --KGRCILIINKTDLV-KKSELKMAHEHLNLLYKFEKIFTISALKNDGLSNLMNYLSE 170
>gi|254293935|ref|YP_003059958.1| GTP-binding protein Era [Hirschia baltica ATCC 49814]
gi|254042466|gb|ACT59261.1| GTP-binding protein Era [Hirschia baltica ATCC 49814]
Length = 331
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 95/177 (53%), Gaps = 13/177 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG+PNAGKS+++N +VG KV+ V+ K TT +V GVM + D Q+ + DTPG+ K
Sbjct: 28 VAVIGSPNAGKSTLVNRLVGAKVSIVTHKVQTTRFQVRGVMMRGDAQVVLVDTPGIFAPK 87
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA------- 254
H+ + V+SAW + ++ + D D +V ++
Sbjct: 88 ----HRLDRAMVKSAWDGAEGADQIIHLVDASSRSHKIDDKVTGADKKTIIDDQRIIDDL 143
Query: 255 -PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+K +L +NK+DL ++DL+ ++++ + Y +FM SGL+G G++ L ++
Sbjct: 144 KASGRKAILALNKIDLF-DREDLIPISKELFNEGVYSDVFMISGLRGGGVRQLADHI 199
>gi|418406570|ref|ZP_12979889.1| GTPase Era [Agrobacterium tumefaciens 5A]
gi|358007063|gb|EHJ99386.1| GTPase Era [Agrobacterium tumefaciens 5A]
Length = 313
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG NAGKS+++N +VG KV+ VS K TT + G+ + QI DTPG+
Sbjct: 19 RSGFVALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAVMRGIAIHKNAQIVFMDTPGI 78
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + V SAW ++++++ D R L ++ + K P
Sbjct: 79 FKPRRRLD----RAMVTSAWGGAKDADLILLLIDSERGLKGDAEAILEGL----KDVP-- 128
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
QK++LC+NK+D V K++DLLK+A ++R FM S G+G + L YL++
Sbjct: 129 QKKILCLNKIDQV-KREDLLKLAAAANEHVTFDRTFMISATNGSGCEDLMDYLVDTL 184
>gi|325292415|ref|YP_004278279.1| GTP-binding protein Era [Agrobacterium sp. H13-3]
gi|325060268|gb|ADY63959.1| GTP-binding protein Era [Agrobacterium sp. H13-3]
Length = 316
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG NAGKS+++N +VG KV+ VS K TT + G+ + QI DTPG+
Sbjct: 22 RSGFVALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAVMRGIAIHKNAQIVFMDTPGI 81
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + V SAW ++++++ D R L ++ + K P
Sbjct: 82 FKPRRRLD----RAMVTSAWGGAKDADLILLLIDSERGLKGDAEAILEGL----KDVP-- 131
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
QK++LC+NK+D V K++DLLK+A ++R FM S G+G + L YL++
Sbjct: 132 QKKILCLNKIDQV-KREDLLKLAAAANEHVTFDRTFMISATNGSGCEDLMDYLVDTL 187
>gi|451941740|ref|YP_007462377.1| GTP-binding protein Era [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
gi|451901127|gb|AGF75589.1| GTP-binding protein Era [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
Length = 301
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 96/174 (55%), Gaps = 13/174 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG PNAGKS+++N +VGTKV+ V+ K TT + G++ +TQI + DTPG+
Sbjct: 8 RSGFVVLIGMPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLIRGIVIHDNTQIVLIDTPGV 67
Query: 198 MLNKSGYSHKDV-KVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ HK + + V +AW + ++L+V+ DV L+ +++ + + +
Sbjct: 68 F-----HPHKRLERAMVSAAWGSAKSADILLVLIDVQSGLSDDVYKMLDIAKNI------ 116
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
KQ ++L +NKVD V K LL + Q + + FM S L G+G K L L
Sbjct: 117 KQDKILVLNKVDTVVKSS-LLALTTQINERVPFVQTFMISALNGSGCKDLLHGL 169
>gi|398350686|ref|YP_006396150.1| GTPase Era [Sinorhizobium fredii USDA 257]
gi|390126012|gb|AFL49393.1| GTPase Era [Sinorhizobium fredii USDA 257]
Length = 309
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 92/179 (51%), Gaps = 11/179 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IGA NAGKS+++N++VG KV+ VS K TT V G+ TQI DTPG+
Sbjct: 16 RSGFVALIGATNAGKSTLVNHLVGAKVSIVSHKVQTTRAIVRGIAIHDKTQIVFMDTPGI 75
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + V +AW +++M++ D R L +++ ++ +
Sbjct: 76 FKPRRRLD----RAMVTTAWGGAKDADLIMLLIDSERGLKGDAEKILEGLKDV------H 125
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
Q ++L +NK+D V + +DLLK+A +ER FM S L G+G L YL D
Sbjct: 126 QPKILVLNKIDRV-RPEDLLKLAAVANEAVPFERTFMISALTGSGCGDLMDYLAAALPD 183
>gi|407720017|ref|YP_006839679.1| GTPase Era [Sinorhizobium meliloti Rm41]
gi|407318249|emb|CCM66853.1| GTPase Era [Sinorhizobium meliloti Rm41]
Length = 309
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IGA NAGKS+++N +VG KV+ VS K TT + G+ QI DTPG+
Sbjct: 16 RSGFVALIGATNAGKSTLVNRLVGVKVSIVSHKVQTTRAIIRGIAIHGSAQIVFMDTPGI 75
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + V +AW +++M++ D R + ++ ++ +
Sbjct: 76 FKPRRRLD----RAMVTTAWGGAKDADLIMLLIDSERGIKGDAEAILEGLKEI------H 125
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
Q +VL +NKVD V +++DLLK+A + +ER FM S L G+G + + YL E
Sbjct: 126 QPKVLVLNKVDQV-RREDLLKLAAAANDVVAFERTFMISALTGSGCEDVMDYLAETL 181
>gi|407782699|ref|ZP_11129909.1| GTP-binding protein Era [Oceanibaculum indicum P24]
gi|407205357|gb|EKE75330.1| GTP-binding protein Era [Oceanibaculum indicum P24]
Length = 306
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 11/170 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++GAPNAGKS+++N ++G KV+ VS K TT V G++ + D+QI DTPG+ + K
Sbjct: 15 VALVGAPNAGKSTLMNALIGGKVSIVSPKVQTTRTRVTGIIAEGDSQIIFVDTPGIFVPK 74
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDS-RVIRLIERMGKQAPPKQKR 260
+ V +AW + ++++ D + DS R+I +E+ G+ A
Sbjct: 75 RRLD----RAMVRAAWDGAKDADRIVLLVDASQARLDEDSERIIAELEKSGQTA------ 124
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+L +NK+DLV ++ LL A+ + RIFM S G G+ L +L
Sbjct: 125 MLALNKIDLVKHREVLLARAQALNERFPFTRIFMISAATGDGIADLRAHL 174
>gi|378825354|ref|YP_005188086.1| GTP-binding protein era [Sinorhizobium fredii HH103]
gi|365178406|emb|CCE95261.1| GTP-binding protein era homolog [Sinorhizobium fredii HH103]
Length = 309
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 90/169 (53%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGA NAGKS+++N++VG KV+ VS K TT + G+ + QI DTPG+ +
Sbjct: 20 VALIGATNAGKSTLVNHLVGAKVSIVSHKVQTTRAIIRGIAIHDNAQIVFMDTPGIFKPR 79
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW ++++++ D R L ++ + K P Q ++
Sbjct: 80 RRLD----RAMVTSAWGGAKDADLIVLLIDSERGLKGDAEAILEAL----KDVP--QPKL 129
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V + +DLLK+A+ +ER FM S L G+G K L YL
Sbjct: 130 LVLNKIDRV-RPEDLLKLAQAANEAVPFERTFMISALTGSGCKDLMDYL 177
>gi|146341376|ref|YP_001206424.1| GTP-binding protein Era [Bradyrhizobium sp. ORS 278]
gi|189037292|sp|A4YWC7.1|ERA_BRASO RecName: Full=GTPase Era
gi|146194182|emb|CAL78203.1| GTP-binding protein (era) [Bradyrhizobium sp. ORS 278]
Length = 307
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 92/171 (53%), Gaps = 11/171 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VSRK TT + G++ + +QI + DTPG+ K
Sbjct: 17 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEGQSQIILVDTPGIFSPK 76
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D + L +I K A +++
Sbjct: 77 RRLD----RAMVTTAWSGAHDADLVCVLLDAKKGLDDEAQAII------DKAASVAHEKI 126
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L +NKVDLV ++K L VA + L + R FM S L G G+ L + L E
Sbjct: 127 LVVNKVDLVPREKLLALVAAANEKL-AFARTFMISALSGDGVDDLRRALAE 176
>gi|254780941|ref|YP_003065354.1| GTP-binding protein Era [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040618|gb|ACT57414.1| GTP-binding protein Era [Candidatus Liberibacter asiaticus str.
psy62]
Length = 311
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 101/183 (55%), Gaps = 11/183 (6%)
Query: 128 EEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADT 187
E ++ +++ +S V ++GA NAGKS+++N VG KV+ V+ K TT V G++++ ++
Sbjct: 11 EHKDFVQDNSRSGCVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKES 70
Query: 188 QICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLI 247
QI DTPG+ K Y K+ + +WS + +++ +V D HR L + L+
Sbjct: 71 QIVFLDTPGIFNAKDSYH----KLMIRLSWSTIKHADIVCLVVDSHREL---KVNIHDLL 123
Query: 248 ERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALT 307
+ + K++ + +L +NK+D V K + LL+ AE L E+ FM S KG G +
Sbjct: 124 KEIAKRS---SRLILILNKIDCV-KPERLLEQAEIANKLVFIEKTFMVSATKGHGCDDVL 179
Query: 308 QYL 310
YL
Sbjct: 180 NYL 182
>gi|334315617|ref|YP_004548236.1| GTP-binding protein Era-like-protein [Sinorhizobium meliloti AK83]
gi|384528785|ref|YP_005712873.1| GTP-binding protein Era-like-protein [Sinorhizobium meliloti
BL225C]
gi|384535190|ref|YP_005719275.1| GTP-binding protein Era [Sinorhizobium meliloti SM11]
gi|333810961|gb|AEG03630.1| GTP-binding protein Era-like-protein [Sinorhizobium meliloti
BL225C]
gi|334094611|gb|AEG52622.1| GTP-binding protein Era-like-protein [Sinorhizobium meliloti AK83]
gi|336032082|gb|AEH78014.1| GTP-binding protein Era [Sinorhizobium meliloti SM11]
Length = 309
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IGA NAGKS+++N +VG KV+ VS K TT + G+ QI DTPG+
Sbjct: 16 RSGFVALIGATNAGKSTLVNRLVGAKVSIVSHKVQTTRAIIRGIAIHGSAQIVFMDTPGI 75
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + V +AW +++M++ D R + ++ ++ +
Sbjct: 76 FKPRRRLD----RAMVTTAWGGAKDADLIMLLIDSERGIKGDAEAILEGLKEV------H 125
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
Q +VL +NKVD V +++DLLK+A + +ER FM S L G+G + + YL E
Sbjct: 126 QPKVLVLNKVDQV-RREDLLKLAAAANDVVAFERTFMISALTGSGCEDVMDYLAETL 181
>gi|418400034|ref|ZP_12973578.1| GTPase Era [Sinorhizobium meliloti CCNWSX0020]
gi|433612843|ref|YP_007189641.1| GTP-binding protein Era [Sinorhizobium meliloti GR4]
gi|359505932|gb|EHK78450.1| GTPase Era [Sinorhizobium meliloti CCNWSX0020]
gi|429551033|gb|AGA06042.1| GTP-binding protein Era [Sinorhizobium meliloti GR4]
Length = 309
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IGA NAGKS+++N +VG KV+ VS K TT + G+ QI DTPG+
Sbjct: 16 RSGFVALIGATNAGKSTLVNRLVGAKVSIVSHKVQTTRAIIRGIAIHGSAQIVFMDTPGI 75
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + V +AW +++M++ D R + ++ ++ +
Sbjct: 76 FKPRRRLD----RAMVTTAWGGAKDADLIMLLIDSERGIKGDAEAILEGLKEV------H 125
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
Q +VL +NKVD V +++DLLK+A + +ER FM S L G+G + + YL E
Sbjct: 126 QPKVLVLNKVDQV-RREDLLKLAAAANDVVAFERTFMISALTGSGCEDVMDYLAETL 181
>gi|359408394|ref|ZP_09200864.1| GTP-binding protein Era [SAR116 cluster alpha proteobacterium
HIMB100]
gi|356676588|gb|EHI48939.1| GTP-binding protein Era [SAR116 cluster alpha proteobacterium
HIMB100]
Length = 304
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 10/174 (5%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
Q++ V +IGAPNAGKS+++N MVG KV+ V+ K TT + G+ + + QI DTPG
Sbjct: 9 QRAGFVTLIGAPNAGKSTLMNAMVGQKVSIVTPKVQTTRSRIRGIAMQDEAQIVFVDTPG 68
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ K + V +AW +VL+++ D R ++++I + K A
Sbjct: 69 IFTPKRRLD----RAMVNAAWQGAADNDVLLLLHDCARARLDDETKMI-----IAKLAEQ 119
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
Q L +NK+DL + L + AE L G+E++FM S G G+ L +L
Sbjct: 120 SQNAALVLNKIDLAKPDQYLARTAE-LSELFGFEKVFMISAQTGNGIDDLKSWL 172
>gi|188581485|ref|YP_001924930.1| GTP-binding protein Era [Methylobacterium populi BJ001]
gi|179344983|gb|ACB80395.1| GTP-binding protein Era [Methylobacterium populi BJ001]
Length = 319
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 100/186 (53%), Gaps = 11/186 (5%)
Query: 125 QEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTK 184
++ +E ++ ++ V +IG PNAGKS+++N +VG KV+ VSRK TT V G++ +
Sbjct: 12 EDARSQETTPQETRAGFVALIGVPNAGKSTLLNALVGAKVSIVSRKVQTTRALVRGIVME 71
Query: 185 ADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVI 244
D Q+ + DTPG+ K + V SAWS + + ++ D + D V
Sbjct: 72 GDAQVVLVDTPGIFAPKRRLD----RAMVHSAWSGAADADAVCLLIDARK---GADDEVE 124
Query: 245 RLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLK 304
++ R+ + PK +L +NK+DL+ +++ LL++ + + +E F+ S L G G+
Sbjct: 125 TILRRLPEVKRPK---ILILNKIDLIARER-LLELVAKLNAMVPFEDTFLISALNGDGVA 180
Query: 305 ALTQYL 310
L + L
Sbjct: 181 DLRKAL 186
>gi|15964826|ref|NP_385179.1| GTP-binding protein Era [Sinorhizobium meliloti 1021]
gi|21263594|sp|Q92R46.1|ERA_RHIME RecName: Full=GTPase Era
gi|15074005|emb|CAC45652.1| Probable GTP-binding protein [Sinorhizobium meliloti 1021]
Length = 313
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IGA NAGKS+++N +VG KV+ VS K TT + G+ QI DTPG+
Sbjct: 20 RSGFVALIGATNAGKSTLVNRLVGAKVSIVSHKVQTTRAIIRGIAIHGSAQIVFMDTPGI 79
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + V +AW +++M++ D R + ++ ++ +
Sbjct: 80 FKPRRRLD----RAMVTTAWGGAKDADLIMLLIDSERGIKGDAEAILEGLKEV------H 129
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
Q +VL +NKVD V +++DLLK+A + +ER FM S L G+G + + YL E
Sbjct: 130 QPKVLVLNKVDQV-RREDLLKLAAAANDVVAFERTFMISALTGSGCEDVMDYLAETL 185
>gi|395792244|ref|ZP_10471682.1| GTPase Era [Bartonella vinsonii subsp. arupensis Pm136co]
gi|395432758|gb|EJF98733.1| GTPase Era [Bartonella vinsonii subsp. arupensis Pm136co]
Length = 301
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 95/174 (54%), Gaps = 13/174 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG PNAGKS+++N +VGTKV+ V+ K TT + G++ +TQI + DTPG+
Sbjct: 8 RSGFVVLIGMPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLIRGIVIHDNTQIVLIDTPGV 67
Query: 198 MLNKSGYSHKDV-KVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ HK + + V +AW + +VL+V+ D L+ ++ +++ +
Sbjct: 68 F-----HPHKRLERAMVSAAWGSAKSADVLLVLIDAQSGLSDDVYTMLDIVKNI------ 116
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
KQ ++L +NKVD V K LL + Q + + FM S L G+G K L L
Sbjct: 117 KQDKILVLNKVDTVVKSS-LLALTTQINERVPFVQTFMISALNGSGCKDLLHAL 169
>gi|395785988|ref|ZP_10465716.1| GTPase Era [Bartonella tamiae Th239]
gi|423717118|ref|ZP_17691308.1| GTPase Era [Bartonella tamiae Th307]
gi|395424446|gb|EJF90633.1| GTPase Era [Bartonella tamiae Th239]
gi|395427907|gb|EJF93990.1| GTPase Era [Bartonella tamiae Th307]
Length = 319
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 11/173 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IGAPNAGKS++IN +VGTKV+ V+ K TT V G++ + QI + DTPG+
Sbjct: 26 RSGFVALIGAPNAGKSTLINQLVGTKVSIVTHKVQTTRALVRGIVIHDNAQIVLIDTPGI 85
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K + V +AW ++++V+ D + IE +GK K
Sbjct: 86 FRPKRRLD----RAMVSTAWGGARDADIVLVLIDAQAGFNDEAKAI---IESLGK---IK 135
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
++L +NKVD V++ LL++ + + + FM S LKG+G L YL
Sbjct: 136 HNKILVLNKVDAVSRPS-LLELTAKLNEKVDFIKTFMISALKGSGCDDLLDYL 187
>gi|227821404|ref|YP_002825374.1| GTP-binding protein Era [Sinorhizobium fredii NGR234]
gi|227340403|gb|ACP24621.1| GTP-binding protein [Sinorhizobium fredii NGR234]
Length = 309
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 11/173 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IGA NAGKS+++N++VG KV+ VS K TT + G+ + QI DTPG+
Sbjct: 16 RSGFVALIGATNAGKSTLVNHLVGAKVSIVSHKVQTTRAIIRGIAIHDNAQIVFMDTPGI 75
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + V +AW + ++++ D R L ++ + K P
Sbjct: 76 FKPRRRLD----RAMVTTAWGGAKDADQIVLLIDSERGLRGDAEAILEAL----KDVP-- 125
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
Q ++L +NK+D V + +DLLK+A + +ER FM S L G+G K L YL
Sbjct: 126 QPKILVLNKIDRV-RPEDLLKLAAAANEVVSFERTFMISALNGSGCKDLMDYL 177
>gi|240850198|ref|YP_002971591.1| GTP-binding protein Era [Bartonella grahamii as4aup]
gi|240267321|gb|ACS50909.1| GTP-binding protein Era [Bartonella grahamii as4aup]
Length = 301
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 92/174 (52%), Gaps = 13/174 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG PNAGKS+++N +VGTKV+ V+ K TT + G++ D QI + DTPG+
Sbjct: 8 RSGFVVLIGMPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLIRGIVIHDDVQIVLVDTPGV 67
Query: 198 MLNKSGYSHKDV-KVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
HK + + V +AW +VL+V+ D L+ ++ ++ M
Sbjct: 68 F-----RPHKRLERAMVSAAWGGAKSADVLLVLIDAQSGLSDEVDMMLDIVNNM------ 116
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
KQ++VL +NKVD V K LL + + + + FM S L G+G K L L
Sbjct: 117 KQEKVLVLNKVDTVVKSS-LLALTTKINERVKFAQTFMISALNGSGCKDLLHAL 169
>gi|456354831|dbj|BAM89276.1| GTP-binding protein [Agromonas oligotrophica S58]
Length = 308
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 98/185 (52%), Gaps = 11/185 (5%)
Query: 128 EEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADT 187
E++ + D + V +IGAPN GKS+++N +VG+KV VSRK TT + G++ + +
Sbjct: 4 EQQAGRGADTRCGFVALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEGAS 63
Query: 188 QICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLI 247
QI + DTPG+ K + V +AWS + +++ V+ D + + +I
Sbjct: 64 QIILVDTPGIFSPKRRLD----RAMVTTAWSGAHDADLVCVLLDAKKGIDDEAQAII--- 116
Query: 248 ERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALT 307
K A +++L +NKVDLV ++K L VA + L + R FM S + G G+ L
Sbjct: 117 ---DKAAAVAHEKILVVNKVDLVPREKLLALVAAANEKL-SFARTFMISAISGDGVDDLR 172
Query: 308 QYLME 312
+ L E
Sbjct: 173 RALAE 177
>gi|384412621|ref|YP_005621986.1| GTP-binding protein Era [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|335932995|gb|AEH63535.1| GTP-binding protein Era [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 306
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 11/181 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
E Q V I+GAPNAGKS+++N +VG K+A +S K TT ++G+ + TQI + D
Sbjct: 9 ENTQHCGLVAIVGAPNAGKSTLVNALVGQKIAIISPKAQTTRARLMGIALQDQTQILLVD 68
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG+ K + + V +AW + ++ +V D LT R+ L+E + +
Sbjct: 69 TPGIFTPKKRFD----RAMVAAAWGSAEGANLVALVVDASSGLT---RRIEPLVEAVAAR 121
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
PK V+ +NKVD +T K +LL +A++ E +FM S G G+ L + L +
Sbjct: 122 KEPK---VIILNKVD-ITPKAELLALAQKLYEAIKPEALFMVSATTGDGVADLKRSLADM 177
Query: 314 F 314
Sbjct: 178 M 178
>gi|395764754|ref|ZP_10445378.1| GTPase Era [Bartonella sp. DB5-6]
gi|395414291|gb|EJF80740.1| GTPase Era [Bartonella sp. DB5-6]
Length = 299
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 93/174 (53%), Gaps = 13/174 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG PNAGKS+++N +VGTK++ V+ K TT + G++ + QI + DTPG+
Sbjct: 8 RSGFVVLIGMPNAGKSTLVNQLVGTKISIVTHKVQTTRTLIRGIVVHDNAQIVLVDTPGV 67
Query: 198 MLNKSGYSHKDV-KVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
HK + + V +AW +VL+V+ DV L+ +++ ++ +
Sbjct: 68 F-----RPHKRLERAMVSAAWGGAKSADVLLVLIDVQSGLSDEVCKMLDIVNNI------ 116
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
KQ ++L +NK+D V K LL + Q + + FM S L G+G K L L
Sbjct: 117 KQDKILVLNKIDTVVKSS-LLALTSQINERVTFVQTFMISALNGSGCKDLLHVL 169
>gi|260754027|ref|YP_003226920.1| GTP-binding protein Era [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258553390|gb|ACV76336.1| GTP-binding protein Era [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 306
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 11/181 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
E Q V I+GAPNAGKS+++N +VG K+A +S K TT ++G+ + TQI + D
Sbjct: 9 ENTQHCGLVAIVGAPNAGKSTLVNALVGQKIAIISPKAQTTRARLMGIALQDQTQILLVD 68
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG+ K + + V +AW + ++ +V D LT R+ L+E + +
Sbjct: 69 TPGIFTPKKRFD----RAMVAAAWGSAEGANLVALVVDASSGLT---RRIEPLVEAVAAR 121
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
PK V+ +NKVD +T K +LL +A++ E +FM S G G+ L + L +
Sbjct: 122 KEPK---VIILNKVD-ITPKAELLALAQKLYEAIKPEALFMVSATTGDGVADLKRSLADM 177
Query: 314 F 314
Sbjct: 178 M 178
>gi|399059717|ref|ZP_10745270.1| GTP-binding protein Era [Novosphingobium sp. AP12]
gi|398039030|gb|EJL32175.1| GTP-binding protein Era [Novosphingobium sp. AP12]
Length = 298
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 95/172 (55%), Gaps = 17/172 (9%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++GAPNAGKS+++N +VG KVA S K TT +LG+ + DTQI + DTPG+ +
Sbjct: 8 VAVLGAPNAGKSTLVNALVGQKVAITSAKAQTTRARLLGIALEGDTQIILADTPGIFEPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFD---VHRHLTSPDSRVIRLIERMGKQAPPKQ 258
+ V +AW + +++V D + RH +P L+E + + +
Sbjct: 68 RRLD----RAMVAAAWEGAQEADAILLVVDAVKLRRHELAP------LLESLKDRL---E 114
Query: 259 KRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+++L +NKVD K+K LL++A++F ++ +F S L G G+ L +L
Sbjct: 115 RKLLVLNKVDASAKEK-LLQLAQEFTGEVAFDEVFFISALTGDGVPQLKTFL 165
>gi|75676108|ref|YP_318529.1| GTP-binding protein Era [Nitrobacter winogradskyi Nb-255]
gi|74420978|gb|ABA05177.1| GTP-binding protein Era [Nitrobacter winogradskyi Nb-255]
Length = 303
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 91/165 (55%), Gaps = 11/165 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VSRK TT + G++ + + QI + DTPG+ + K
Sbjct: 13 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIENNAQIILVDTPGIFVPK 72
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D + D ++ ++ A PK +
Sbjct: 73 RRLD----RAMVSTAWSGAHDADLVCVLLDARAGI---DEEADAILTKLAGVAHPK---I 122
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
L +NK+DLV ++K LL +A G+E FM S L G G+ L
Sbjct: 123 LVLNKIDLVRREK-LLALAGSANERLGFEETFMVSALSGDGVDDL 166
>gi|56552280|ref|YP_163119.1| GTP-binding protein Era [Zymomonas mobilis subsp. mobilis ZM4]
gi|56543854|gb|AAV90008.1| GTP-binding protein Era [Zymomonas mobilis subsp. mobilis ZM4]
Length = 306
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 94/181 (51%), Gaps = 11/181 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
E Q V I+GAPNAGKS+++N +VG K+A +S K TT ++G+ + TQI + D
Sbjct: 9 ENTQHCGLVAIVGAPNAGKSTLVNALVGQKIAIISPKAQTTRARLMGIALQDQTQILLVD 68
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG+ K + + V +AW + ++ +V D LT R+ L+E + +
Sbjct: 69 TPGIFTPKKRFD----RAMVAAAWGSAEGANLVALVVDASSGLT---RRIEPLVEAVAAR 121
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
PK V+ +NKVD +T K +LL +A++ E +FM S G G+ L L +
Sbjct: 122 KEPK---VIILNKVD-ITPKAELLALAQKLYEAIKPEALFMVSATTGDGVADLKHSLADM 177
Query: 314 F 314
Sbjct: 178 M 178
>gi|328784045|ref|XP_001122128.2| PREDICTED: GTPase Era, mitochondrial-like [Apis mellifera]
Length = 342
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 100/187 (53%), Gaps = 9/187 (4%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
E+ +E++K + V +G PNAGKS+++N ++ + S K +TT H+ + T+ +TQI
Sbjct: 45 ELYQENKKLLKVAFLGLPNAGKSTLVNKLIHRSICPTSSKVHTTLHKAEAIYTEGNTQII 104
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLT--SPDSRVIRLIE 248
DTPGL+++K ++K +K E SA+ +V+ ++ DV T + V+ I
Sbjct: 105 FMDTPGLVISKEIKTYKLLKTFEEDPKSAITDADVIGIIQDVSNIYTRHKLEDFVLDYIN 164
Query: 249 RMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQF---KHLPGYERIFMTSGLKGAGLKA 305
K P ++ NKVD + KK LL + F + P ++ IFM S L G G+
Sbjct: 165 NKIKDTP----LLMIFNKVDKLKKKNILLDLTRMFTNNNNYPKFDDIFMISALNGDGVDD 220
Query: 306 LTQYLME 312
L YL++
Sbjct: 221 LRTYLLD 227
>gi|347754668|ref|YP_004862232.1| GTP-binding protein Era [Candidatus Chloracidobacterium
thermophilum B]
gi|347587186|gb|AEP11716.1| GTP-binding protein Era [Candidatus Chloracidobacterium
thermophilum B]
Length = 318
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 98/189 (51%), Gaps = 10/189 (5%)
Query: 126 EEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKA 185
E E D +S V IG PNAGKS++INYMVG K+AAVS K TT +LG++T+
Sbjct: 15 EPAPESSASPDLRSGFVAFIGRPNAGKSTLINYMVGEKIAAVSDKPQTTRTRILGIVTRP 74
Query: 186 DTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIR 245
+ QI DTPG ++K GY K +++ A+ ++++++ D + D V+
Sbjct: 75 EGQIVFVDTPG--VHKPGYRLN--KRMMQAVLDALATVDIVVLLRDASVSTGNGDRFVLN 130
Query: 246 LIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKA 305
L+++ G+ A +L +NK+D + K LL + + ++H + S L G G
Sbjct: 131 LVKQSGRPA------LLALNKIDRLGDKSRLLTLIDFYRHEHDFLDYIPISALTGEGTDV 184
Query: 306 LTQYLMEQF 314
+ L+
Sbjct: 185 FLRCLLTHL 193
>gi|365883074|ref|ZP_09422254.1| GTP-binding protein (era) [Bradyrhizobium sp. ORS 375]
gi|365288506|emb|CCD94785.1| GTP-binding protein (era) [Bradyrhizobium sp. ORS 375]
Length = 308
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 96/171 (56%), Gaps = 11/171 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VSRK TT + G++ + +QI + DTPG+ K
Sbjct: 18 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEGASQIILVDTPGIFSPK 77
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D + L +++VI + K A +++
Sbjct: 78 RRLD----RAMVTTAWSGAHDADLVCVLLDAKKGLDD-EAQVI-----IDKAASVAHEKI 127
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L +NKVDLV ++K L VA + L + R FM S + G G+ L + L E
Sbjct: 128 LVVNKVDLVPREKLLALVAAANEKL-SFARTFMISAISGDGVDDLRRALAE 177
>gi|365898359|ref|ZP_09436320.1| GTP-binding protein (era) [Bradyrhizobium sp. STM 3843]
gi|365420884|emb|CCE08862.1| GTP-binding protein (era) [Bradyrhizobium sp. STM 3843]
Length = 310
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 93/169 (55%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VSRK TT + G++ + +QI + DTPG+ K
Sbjct: 20 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEGHSQIILVDTPGIFAPK 79
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D + L D ++ R A +++
Sbjct: 80 RRLD----RAMVTTAWSGAHDADLVCVLLDAKKGL---DDEAEAILTRAASVA---HEKI 129
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NKVDLV ++K L VA + LP + R ++ S L G G+ L + L
Sbjct: 130 LVVNKVDLVPREKLLALVAAANERLP-FARTYLISALSGDGVDDLRRAL 177
>gi|451940468|ref|YP_007461106.1| GTP-binding protein Era [Bartonella australis Aust/NH1]
gi|451899855|gb|AGF74318.1| GTP-binding protein Era [Bartonella australis Aust/NH1]
Length = 300
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 95/173 (54%), Gaps = 11/173 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S + +IGAPNAGKS+++N +VGTKV+ V+ K TT V G++ + QI + DTPG+
Sbjct: 8 RSGFIALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLVRGIVIHNNAQIVLIDTPGV 67
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ V +AW ++L+V+ DV L+ ++ +++ + +
Sbjct: 68 FRPQKRLEC----AMVSTAWGGARNADLLLVLVDVKGGLSHEVDAILDILKSV------E 117
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
Q ++L +NK+D VTK L AE K + + R FM S LKG+G + L Y+
Sbjct: 118 QDKILVLNKIDTVTKSSLLALTAEINKRVE-FLRTFMISALKGSGCRDLLDYV 169
>gi|393771548|ref|ZP_10360019.1| GTP-binding protein Era [Novosphingobium sp. Rr 2-17]
gi|392723035|gb|EIZ80429.1| GTP-binding protein Era [Novosphingobium sp. Rr 2-17]
Length = 323
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 17/178 (9%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
DQ V ++GAPNAGKS+++N +VG KVA S K TT +LG+ + TQI + DTP
Sbjct: 28 DQNCGLVAVLGAPNAGKSTLVNALVGQKVAITSAKAQTTRARLLGIALQDKTQIILADTP 87
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDV---HRHLTSPDSRVIRLIERMGK 252
G+ K + V +AW + +++V DV RH ++ L+E +
Sbjct: 88 GIFEPKRRLD----RAMVAAAWEGAQEADAILLVVDVVKLRRH------ELLPLLEAL-- 135
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+A P++K +L +NKVD K+K LL++A +F + ++ +F S L G G+ L +L
Sbjct: 136 KARPERK-LLALNKVDASPKEK-LLELATEFTAVVPFDEVFFVSALTGDGVPQLKAHL 191
>gi|90420863|ref|ZP_01228768.1| GTP-binding protein [Aurantimonas manganoxydans SI85-9A1]
gi|90334838|gb|EAS48610.1| GTP-binding protein [Aurantimonas manganoxydans SI85-9A1]
Length = 320
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 94/174 (54%), Gaps = 12/174 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V ++GAPNAGKS+++N +VGTKV+ V+ K TT V G+ + TQI DTPG+
Sbjct: 26 RSGFVALLGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIAMRDRTQIVFVDTPGV 85
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K + V +AWS ++++ + D R + + V ++ER+ K
Sbjct: 86 FAPKRRLD----RAMVRTAWSGARDADIVLAIIDADRGI---NEEVETILERL---KDVK 135
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLP-GYERIFMTSGLKGAGLKALTQYL 310
Q +VL +NKVD + + + LL + +Q ++ IFM S L G+G L YL
Sbjct: 136 QPKVLLLNKVDQMRRDR-LLGLTQQITERGVAFDEIFMISALNGSGCGDLMDYL 188
>gi|398831536|ref|ZP_10589714.1| GTP-binding protein Era [Phyllobacterium sp. YR531]
gi|398212243|gb|EJM98852.1| GTP-binding protein Era [Phyllobacterium sp. YR531]
Length = 312
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 105/193 (54%), Gaps = 15/193 (7%)
Query: 126 EEEEEEVKEEDQ----KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGV 181
E+E+ E +Q +S + +IGAPNAGKS+++N +VG+KV+ V+ K TT V G+
Sbjct: 3 EQEQTPASEAEQAVPTRSGFIALIGAPNAGKSTLVNQLVGSKVSIVTHKVQTTRALVRGI 62
Query: 182 MTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDS 241
+ TQ+ + DTPG+ K + V +AW ++++V+ DV + + D
Sbjct: 63 VIHEQTQMVLVDTPGIFKPKRRLD----RAMVTTAWGGAKDADLILVLIDVEQGI---DD 115
Query: 242 RVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGA 301
L+E + + K+K +L +NKVD + LL++A++ +++ FM S LKG
Sbjct: 116 EAEILLESLRDK---KRKVILVLNKVDRIEAPM-LLELAKKANEKVKFDQTFMISALKGY 171
Query: 302 GLKALTQYLMEQF 314
G K L +YL E
Sbjct: 172 GCKDLLKYLAENL 184
>gi|365889049|ref|ZP_09427770.1| GTP-binding protein (era) [Bradyrhizobium sp. STM 3809]
gi|365335226|emb|CCE00301.1| GTP-binding protein (era) [Bradyrhizobium sp. STM 3809]
Length = 308
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 11/171 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VSRK TT + G++ + +QI + DTPG+ K
Sbjct: 18 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEGASQIILVDTPGIFSPK 77
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D + L +I K A +++
Sbjct: 78 RRLD----RAMVTTAWSGAHDADLVCVLLDAKKGLDDEAQAII------DKAASVAHEKI 127
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L +NKVDLV ++K L VA + L + R FM S + G G+ L + L E
Sbjct: 128 LVVNKVDLVPREKLLALVAAANEKL-SFARTFMISAISGDGVDDLRRALAE 177
>gi|319898693|ref|YP_004158786.1| GTP-binding protein Era [Bartonella clarridgeiae 73]
gi|319402657|emb|CBI76203.1| GTP-binding protein Era [Bartonella clarridgeiae 73]
Length = 300
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 94/174 (54%), Gaps = 13/174 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG PNAGKS+++N +VGTK++ V+ K TT V G++ TQI + DTPG+
Sbjct: 8 RSGFVAVIGVPNAGKSTLVNQLVGTKISIVTHKVQTTRTLVRGIVIYDKTQIILIDTPGV 67
Query: 198 MLNKSGYSHKDV-KVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
HK + + V +AW ++L+V+ DV L+ ++ +++ +
Sbjct: 68 F-----RPHKRLERAMVSAAWGGAKNADILLVLIDVQSGLSDEVDAMLDILKSV------ 116
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+Q ++L +NK+D V K LL + + + + FM S L G+G K L YL
Sbjct: 117 EQDKILVLNKIDTVAKSS-LLALTAKVNERVNFLQTFMISALNGSGCKDLLYYL 169
>gi|167645702|ref|YP_001683365.1| GTP-binding protein Era [Caulobacter sp. K31]
gi|167348132|gb|ABZ70867.1| GTP-binding protein Era [Caulobacter sp. K31]
Length = 329
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 91/178 (51%), Gaps = 19/178 (10%)
Query: 144 IIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSG 203
IIGAPNAGKS+++N MVG KV+ V++K TT V GV TQI + DTPG+ +
Sbjct: 28 IIGAPNAGKSTLVNRMVGAKVSIVTQKVQTTRFPVRGVAMTGQTQIVLVDTPGIFTPRRR 87
Query: 204 YSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSR-----------VIRLIERMGK 252
+ V SAWS EV++ + DV L S + R V +IE G
Sbjct: 88 LD----RAMVRSAWSGAEDSEVVVHLVDVQAELASRERRASAGEHRSVQDVQTIIE--GL 141
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+A +Q +L +NK+D V K++ LL VA Y +FM S GAG+ L L
Sbjct: 142 KASNRQV-ILALNKIDGV-KRETLLAVAHDLYETGVYSEVFMISASTGAGVDDLMAKL 197
>gi|94497605|ref|ZP_01304174.1| GTP-binding protein Era [Sphingomonas sp. SKA58]
gi|94423022|gb|EAT08054.1| GTP-binding protein Era [Sphingomonas sp. SKA58]
Length = 302
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 13/177 (7%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
+V EE Q+ V I+GAPNAGKS+++N +VG KVA S K TT V+GV + D QI
Sbjct: 2 DVSEESQRCGVVAIVGAPNAGKSTLVNALVGQKVAITSPKAQTTRTRVMGVAIEGDAQIV 61
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIR-LIER 249
+ DTPG+ K + V++AW +++ +V D L ++ L+ R
Sbjct: 62 LVDTPGIFAPKRRLD----RAMVQAAWGGAQGADLIALVVDGKAGLGPKMEPIVEALVHR 117
Query: 250 MGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
+++ L +NKVD+ K+K L+ + ++ + G+E F S G GL L
Sbjct: 118 -------SERKWLVLNKVDIAIKEKLLVHTQKLYERV-GFEETFFISAQTGDGLAQL 166
>gi|337287868|ref|YP_004627340.1| GTP-binding protein Era-like-protein [Thermodesulfobacterium sp.
OPB45]
gi|334901606|gb|AEH22412.1| GTP-binding protein Era-like-protein [Thermodesulfobacterium
geofontis OPF15]
Length = 306
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 96/175 (54%), Gaps = 12/175 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS VGIIG PN GKS+++N ++GTKV+ VS K TT + G++T+ + QI DTPG+
Sbjct: 10 KSGFVGIIGLPNVGKSTLLNQLLGTKVSIVSPKPQTTRFNIKGILTRDNFQIIFVDTPGI 69
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K ++ VK A S + ++++ V DV H + +++ LI K
Sbjct: 70 HEAKDLFNQMMVK----EALSVLQDIDIILWVMDVT-HRIPEEEKILDLIREANKPT--- 121
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
+L +NK+DL+ KK++LL + + F L ++ I S LK GL L L++
Sbjct: 122 ---ILALNKIDLI-KKQELLPIIDYFSKLYDFKAIVPISALKNDGLDRLLDELVK 172
>gi|328543512|ref|YP_004303621.1| GTP-binding protein Era [Polymorphum gilvum SL003B-26A1]
gi|326413256|gb|ADZ70319.1| GTP-binding protein Era [Polymorphum gilvum SL003B-26A1]
Length = 318
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ +IGAPNAGKS+++N +VGTKV+ V+ K TT V G+ Q+ DTPG+ K
Sbjct: 29 IALIGAPNAGKSTLLNQLVGTKVSIVTHKVQTTRAIVRGIAMHGSAQLVFVDTPGIFQPK 88
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V++AW +V+ ++ D + L+ V +++R+ P RV
Sbjct: 89 RRLD----RAMVDTAWGGARDADVIALLIDARKGLS---EEVETILDRLADLRGP---RV 138
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V +++ LL +A+ +ER FM S L G G+ + Y
Sbjct: 139 LILNKID-VARREKLLTLAQAANERVAFERTFMVSALTGDGVADMLDYF 186
>gi|154247805|ref|YP_001418763.1| GTP-binding protein Era [Xanthobacter autotrophicus Py2]
gi|154161890|gb|ABS69106.1| GTP-binding protein Era [Xanthobacter autotrophicus Py2]
Length = 385
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 92/172 (53%), Gaps = 11/172 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++GAPNAGKS++ N +VGTKV+ VS K TT V G+ Q+ + DTPG+ K
Sbjct: 94 VALLGAPNAGKSTLTNQLVGTKVSIVSHKVQTTRAIVRGIALDGAAQLVLVDTPGIFSPK 153
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ + V SAW+ +V+ ++ D R L D + L+ + + P R
Sbjct: 154 ----RRLERAMVSSAWTHAADADVIALLVDAKRGL---DEDIEALLAPLSQIHKP---RA 203
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
L +NK+D++ ++ LL +A Q ++R+FM S L G G+ + ++ EQ
Sbjct: 204 LILNKIDII-RRDTLLALAAQINEKLAFDRVFMVSALTGDGVADVRRWFAEQ 254
>gi|359790203|ref|ZP_09293112.1| GTPase Era [Mesorhizobium alhagi CCNWXJ12-2]
gi|359253883|gb|EHK56960.1| GTPase Era [Mesorhizobium alhagi CCNWXJ12-2]
Length = 304
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 93/180 (51%), Gaps = 13/180 (7%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ +S V +IGAPNAGKS+++N +VG KV+ V+ K TT V G+ T + QI DTP
Sbjct: 9 ETRSGFVALIGAPNAGKSTLVNQLVGAKVSIVTHKVQTTRAIVRGIATHRNAQIVFVDTP 68
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTS-PDSRVIRLIERMGKQA 254
G+ + + V +AW +V++V+ D R + D+ + L A
Sbjct: 69 GIFRPRRRLD----QAMVTTAWGGAKDADVVLVLIDAERGIKGDADAMLTNL-------A 117
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
+Q ++L +NK+D V K + LL +A ++R FM S L GAG A+ +L E
Sbjct: 118 GVRQPKILVLNKLDRV-KPESLLALAATANERVDFQRTFMVSALTGAGCDAILDHLAETL 176
>gi|383771403|ref|YP_005450468.1| GTP-binding protein Era [Bradyrhizobium sp. S23321]
gi|381359526|dbj|BAL76356.1| GTP-binding protein Era [Bradyrhizobium sp. S23321]
Length = 308
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 91/171 (53%), Gaps = 11/171 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG KV VSRK TT + G++ + + QI + DTPG+ L K
Sbjct: 18 VALIGAPNVGKSTLVNALVGAKVTIVSRKVQTTRALIRGIVIENNAQIILVDTPGIFLPK 77
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D + + + K A +++
Sbjct: 78 RRLD----RAMVSTAWSGAHDADLVCVLIDAKAGIDEEAEAI------LTKVASVNHEKI 127
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L +NKVDLV ++K LL +A+ + + FM + + G G+ L Q L E
Sbjct: 128 LVINKVDLVQREK-LLALAQAANERMAFAKTFMIAAISGDGVDDLRQTLAE 177
>gi|386402442|ref|ZP_10087220.1| GTP-binding protein Era [Bradyrhizobium sp. WSM1253]
gi|385743068|gb|EIG63264.1| GTP-binding protein Era [Bradyrhizobium sp. WSM1253]
Length = 308
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 92/171 (53%), Gaps = 11/171 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG KV VSRK TT + G++ + ++QI + DTPG+ L K
Sbjct: 18 VALIGAPNVGKSTLVNALVGAKVTIVSRKVQTTRALIRGIVIENNSQIILVDTPGIFLPK 77
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D + + + K A K +++
Sbjct: 78 RRLD----RAMVSTAWSGAHDADLVCVLLDAKAGIDEEAEAI------LTKVASVKHEKI 127
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L +NKVDLV ++K LL +A+ + + FM + + G G+ L L E
Sbjct: 128 LVINKVDLVQREK-LLALAQAANERMAFAQTFMIAAISGDGVDDLRHTLAE 177
>gi|395791245|ref|ZP_10470703.1| GTPase Era [Bartonella alsatica IBS 382]
gi|395408608|gb|EJF75218.1| GTPase Era [Bartonella alsatica IBS 382]
Length = 301
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 96/174 (55%), Gaps = 13/174 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG PNAGKS+++N +VGTKV+ V+ K TT + G++ +TQI + DTPG+
Sbjct: 8 RSGFVVLIGMPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLIRGIVIHDNTQIVLVDTPGV 67
Query: 198 MLNKSGYSHKDV-KVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
HK + + V AW +V +VL+V+ DV L+ ++ +++ +
Sbjct: 68 F-----RPHKRLERAMVSIAWKSVKNADVLLVLIDVQSGLSDDVYTMLDIVKNV------ 116
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
KQ ++L +NK+D V K+ LL + + + FM S LKG+G K L L
Sbjct: 117 KQDKILVLNKIDTVAKES-LLALTAKINERVKFLHTFMISALKGSGCKDLLYAL 169
>gi|367475466|ref|ZP_09474925.1| GTP-binding protein (era) [Bradyrhizobium sp. ORS 285]
gi|365272182|emb|CCD87393.1| GTP-binding protein (era) [Bradyrhizobium sp. ORS 285]
Length = 308
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 92/171 (53%), Gaps = 11/171 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VSRK TT + G++ + +QI + DTPG+ K
Sbjct: 18 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEGQSQIILVDTPGIFSPK 77
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D + + +I K A +++
Sbjct: 78 RRLD----RAMVTTAWSGAHDADLVCVLLDAKKGIDDEAQAII------DKAASVAHEKI 127
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L +NKVDLV ++K L VA + L + R FM S + G G+ L + L E
Sbjct: 128 LVVNKVDLVPREKLLALVAAANEKL-SFARTFMISAISGDGVDDLRRALAE 177
>gi|322790512|gb|EFZ15377.1| hypothetical protein SINV_01619 [Solenopsis invicta]
Length = 337
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 99/199 (49%), Gaps = 12/199 (6%)
Query: 124 RQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMT 183
+ E ++ EDQKS+ + +GAPN GKS++IN ++ V VS K +TT + G+
Sbjct: 38 QSNENVTSIRHEDQKSLKIAFLGAPNVGKSTLINQLIKRSVCPVSCKVHTTETKAHGIYV 97
Query: 184 KADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH----RHLTSP 239
+ DTQ+ DTPG++ K K K ++++ +++ +V D RH P
Sbjct: 98 EGDTQLIFMDTPGMVSKKECEKFKLAKSFKADPKTSLHTADIVGIVQDADNIYTRHKIDP 157
Query: 240 DSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQF---KHLPGYERIFMTS 296
+ L+E + + K +L +NKVD + KK+ LL K P + IFM S
Sbjct: 158 N-----LLELLTEDIKNKIPIILIINKVDRLKKKEILLDFVNTLTKSKKSPSFYDIFMIS 212
Query: 297 GLKGAGLKALTQYLMEQFK 315
L G G+ L YL++ K
Sbjct: 213 ALTGDGVNDLRSYLLDTAK 231
>gi|374575960|ref|ZP_09649056.1| GTP-binding protein Era [Bradyrhizobium sp. WSM471]
gi|374424281|gb|EHR03814.1| GTP-binding protein Era [Bradyrhizobium sp. WSM471]
Length = 308
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 91/171 (53%), Gaps = 11/171 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG KV VSRK TT + G++ + + QI + DTPG+ L K
Sbjct: 18 VALIGAPNVGKSTLVNALVGAKVTIVSRKVQTTRALIRGIVIENNAQIILVDTPGIFLPK 77
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D + + + K A K +++
Sbjct: 78 RRLD----RAMVSTAWSGAHDADLVCVLLDAKAGIDEEAEAI------LTKVASVKHEKI 127
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L +NKVDLV ++K LL +A+ + + FM + + G G+ L L E
Sbjct: 128 LVINKVDLVQREK-LLALAQAANERMAFAKTFMIAAISGDGVDDLRHTLAE 177
>gi|85716283|ref|ZP_01047257.1| GTP-binding protein Era [Nitrobacter sp. Nb-311A]
gi|85696955|gb|EAQ34839.1| GTP-binding protein Era [Nitrobacter sp. Nb-311A]
Length = 303
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VSRK TT + G++ + + QI + DTPG+ + K
Sbjct: 13 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVVENNAQIILVDTPGIFVPK 72
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D + D ++ ++ A PK +
Sbjct: 73 RRLD----RAMVSTAWSGAHDADLVCVLLDARAGI---DDEADAILTKLAAVAHPK---I 122
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+DLV ++K LL +A +E FM S L G G+ L + L
Sbjct: 123 LVLNKIDLVPREK-LLALAGAANERLSFEDTFMVSALSGDGVDDLRRSL 170
>gi|402820689|ref|ZP_10870255.1| hypothetical protein IMCC14465_14890 [alpha proteobacterium
IMCC14465]
gi|402510489|gb|EJW20752.1| hypothetical protein IMCC14465_14890 [alpha proteobacterium
IMCC14465]
Length = 305
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ +IG PNAGKS++ N +VG KVA V+ K TT + V+ +Q+ + DTPG+
Sbjct: 9 IAVIGPPNAGKSTLSNALVGQKVAIVTHKAQTTRARLRAVVMHDTSQVVLVDTPGIF--- 65
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
SG D K V+ AWS + ++VV D R L + V+ ++ + K +
Sbjct: 66 SGVKKLD-KAMVQEAWSGAEEADAVLVVLDASRSLPAETDLVLAGVKDISKPV------I 118
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NKVD V ++K LL++ +Q + FM S LKG GL L +L
Sbjct: 119 LVLNKVDAVKREK-LLELTQQLNEAARFADTFMVSALKGTGLIELKNHL 166
>gi|397677536|ref|YP_006519074.1| GTP-binding protein Era-like-protein [Zymomonas mobilis subsp.
mobilis ATCC 29191]
gi|395398225|gb|AFN57552.1| GTP-binding protein Era-like-protein [Zymomonas mobilis subsp.
mobilis ATCC 29191]
Length = 306
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 93/181 (51%), Gaps = 11/181 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
E Q V I+GAPNAGKS+++N +VG K+A +S K TT ++G+ + TQI + D
Sbjct: 9 ENTQHCGLVAIVGAPNAGKSTLVNALVGQKIAIISPKAQTTRARLMGIALQDQTQILLVD 68
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG+ K + + V +AW + ++ +V D LT R L+E + +
Sbjct: 69 TPGIFTPKKRFD----RAMVAAAWGSAEGANLVALVVDASSGLT---RRFEPLVEAVAAR 121
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
PK V+ +NKVD +T K +LL +A++ E +FM S G G+ L L +
Sbjct: 122 KEPK---VIILNKVD-ITPKAELLALAQKLYEAIKPEALFMVSATTGDGVADLKHSLADM 177
Query: 314 F 314
Sbjct: 178 M 178
>gi|319407032|emb|CBI80669.1| GTP-binding protein Era [Bartonella sp. 1-1C]
Length = 300
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 93/174 (53%), Gaps = 13/174 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG PNAGKS+++N +VGTKV+ V+ K TT V G++ TQI + DTPG+
Sbjct: 8 RSGFVALIGVPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLVRGIVIYDKTQIILIDTPGV 67
Query: 198 MLNKSGYSHKDV-KVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
HK + + V +AW ++L+V+ D L+ ++ +++ +
Sbjct: 68 F-----RPHKRLERAMVSAAWGGAKNADILLVLIDAQSGLSDEVDAMLDILKSI------ 116
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+Q ++L +NK+D V K LL + + + + FM S L G+G K L YL
Sbjct: 117 EQDKILVLNKIDTVVKSS-LLALTAKVNERVNFLQTFMISALNGSGCKDLLHYL 169
>gi|114570120|ref|YP_756800.1| GTP-binding protein Era [Maricaulis maris MCS10]
gi|122315961|sp|Q0APC5.1|ERA_MARMM RecName: Full=GTPase Era
gi|114340582|gb|ABI65862.1| GTP-binding protein Era [Maricaulis maris MCS10]
Length = 314
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 95/178 (53%), Gaps = 19/178 (10%)
Query: 144 IIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSG 203
+IG+PNAGKS+++N +VG KV V+ K TT V GV +TQI + DTPG+ K+
Sbjct: 13 VIGSPNAGKSTLVNALVGEKVTIVTHKVQTTRFAVRGVALAGETQIVLVDTPGVFAPKTR 72
Query: 204 YSHKDVKVRVESAWSAVNLFEVLMVVFDV-------HRHLTSPDSRVI----RLIERMGK 252
K V +AWS + +M V D H S DSR++ R+ E + K
Sbjct: 73 LD----KSMVAAAWSGAGEADTIMHVVDAGARARMEHGGAKSGDSRMVEDDDRVTEGLKK 128
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+QK +L +NKVDL+ + + LL ++++ Y +FM S G+G+ L +++
Sbjct: 129 T---EQKAILVLNKVDLMPRDQ-LLAMSQELYETGVYSEVFMISAKTGSGVPQLREFI 182
>gi|304392069|ref|ZP_07374011.1| GTP-binding protein Era [Ahrensia sp. R2A130]
gi|303296298|gb|EFL90656.1| GTP-binding protein Era [Ahrensia sp. R2A130]
Length = 314
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 92/173 (53%), Gaps = 11/173 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPNAGKS++IN +VGTKV+ VS K TT V G+ + ++QI DTPG+ +
Sbjct: 25 VALIGAPNAGKSTLINRLVGTKVSIVSHKVQTTRTVVRGIANRDNSQIIFADTPGIFQPR 84
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V++AW +++ ++ D R + R+ ++++ PK V
Sbjct: 85 RRLD----RAMVDAAWGGAKDADMICLLIDSERGIRGDAERI---LDKLKNVHLPK---V 134
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L MNK+D V + K LL + +Q ++R F+ S + G G + YL ++
Sbjct: 135 LLMNKIDRVQRDK-LLALVDQANKAVNFDRTFLISAMNGDGCEDYMDYLKDEL 186
>gi|78358630|ref|YP_390079.1| GTPase Era [Desulfovibrio alaskensis G20]
gi|78221035|gb|ABB40384.1| GTP-binding protein Era [Desulfovibrio alaskensis G20]
Length = 308
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 100/172 (58%), Gaps = 10/172 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++G PNAGKS+++N ++G KVA V+ K TT ++++G++T+ D Q+ DTPG+ +
Sbjct: 12 VALMGPPNAGKSTMMNSLLGQKVAIVTPKPQTTRNQIVGILTQPDAQVVFMDTPGIHQLR 71
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSP---DSRVIRLIERMGKQAPPKQ 258
+ ++ +++AW +++ +V+MVV D + ++ P D+ + LIE + + K+
Sbjct: 72 GKMN----RLLLQAAWQSMDGADVIMVVLDSNLYVRKPDFLDNDIEPLIEVIRHE---KR 124
Query: 259 KRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
V+ +NKVD+ K +L + E+ + IF S L GL+ + ++
Sbjct: 125 PVVVALNKVDMFADKSRMLPLLEKLAEMWPAAEIFPVSALNDDGLRQMLAFI 176
>gi|389877455|ref|YP_006371020.1| GTP-binding protein Era [Tistrella mobilis KA081020-065]
gi|388528239|gb|AFK53436.1| GTP-binding protein Era [Tistrella mobilis KA081020-065]
Length = 359
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 99/178 (55%), Gaps = 12/178 (6%)
Query: 127 EEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKAD 186
E V ++QK+ +IGAPNAGKS+++N +VG+KV+ VS K TT ++G+
Sbjct: 54 EAPASVPVDEQKTGFFAVIGAPNAGKSTLVNRLVGSKVSIVSPKVQTTRSRIVGIAMHGP 113
Query: 187 TQICIFDTPGLMLNKSGYSHKDVKVRVESAWS-AVNLFEVLMVVFDVHRHLTSPDSRVIR 245
Q+ DTPG+ K + K V++AWS A + + L+++ D R +T ++
Sbjct: 114 AQLVFIDTPGIFRPK----RRLEKAMVQAAWSGAGDAGDGLLMMIDAKRGITDDVRLIVD 169
Query: 246 LIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGL 303
++ G++A +NKVDL+ ++K LL +A + L ++RIFM S G+G+
Sbjct: 170 GLKAEGRRA------WAVLNKVDLLAREK-LLPLAAEVDGLGIFDRIFMISAENGSGV 220
>gi|103486700|ref|YP_616261.1| GTP-binding protein Era [Sphingopyxis alaskensis RB2256]
gi|98976777|gb|ABF52928.1| GTP-binding protein Era [Sphingopyxis alaskensis RB2256]
Length = 297
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
Q+ V ++GAPNAGKS+++N +VG KVA VS K TT ++GV + +TQI + DTPG
Sbjct: 3 QRCGFVAVVGAPNAGKSTLVNALVGQKVAIVSPKAQTTRTRLMGVAMEGETQIVLIDTPG 62
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ + + + V +AW ++ E ++V+ D P RV R+++ + +
Sbjct: 63 IF----APARRLDRAMVAAAWGSLEQAEAILVMVDAA---AKPTGRVERVLDGIANR--- 112
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+K+ L +NKVDL T+K LL +A ++ F + G G+ L +L
Sbjct: 113 PEKKYLILNKVDL-TRKDKLLTLATDLNAKLTFDETFFIAASSGDGVPELKAHL 165
>gi|192291351|ref|YP_001991956.1| GTP-binding protein Era [Rhodopseudomonas palustris TIE-1]
gi|192285100|gb|ACF01481.1| GTP-binding protein Era [Rhodopseudomonas palustris TIE-1]
Length = 307
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 97/186 (52%), Gaps = 11/186 (5%)
Query: 128 EEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADT 187
E E+ + V +IGAPN GKS+++N +VG+KV VSRK TT + G++ ++ +
Sbjct: 3 EHEDAATAATRCGFVALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIESGS 62
Query: 188 QICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLI 247
QI + DTPG+ K + V++AWS + +++ V+ D + +
Sbjct: 63 QIILVDTPGIFAPKRRLD----RAMVKTAWSGAHDADIVCVLLDARAGINEQAEDI---- 114
Query: 248 ERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALT 307
+ A + ++L +NK+DL+ ++K LL +A+ +++ FM S L G G+ L
Sbjct: 115 --LANLANVDRPKLLVLNKIDLIAREK-LLALAQAANQRLAFDQTFMVSALTGDGVDDLR 171
Query: 308 QYLMEQ 313
+ L Q
Sbjct: 172 KALAAQ 177
>gi|373458094|ref|ZP_09549861.1| GTP-binding protein Era-like-protein [Caldithrix abyssi DSM 13497]
gi|371719758|gb|EHO41529.1| GTP-binding protein Era-like-protein [Caldithrix abyssi DSM 13497]
Length = 299
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 100/181 (55%), Gaps = 14/181 (7%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ KS V IIG PNAGKS+++N ++ K++ +S K TT VLG++ KA+ Q+ DT
Sbjct: 8 ENFKSGYVAIIGLPNAGKSTLLNALLNIKLSIISAKPQTTRRRVLGILNKAEYQVVFIDT 67
Query: 195 PGLMLNKSGYS-HKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
PG++ K Y H + +V +A +L L+V H+H D +E M
Sbjct: 68 PGII--KPKYKLHTRMMEQVHTALQDADLL-ALIVDATEHKHPVEVD------LEAMN-- 116
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
P K+ +L +NKVDL+ K+DLL + +Q++ +E I S LK G+ + Q ++++
Sbjct: 117 -PKKKPALLLLNKVDLIN-KQDLLPLIDQYREFYPFEEIIPISALKRDGVDQVEQEIVKR 174
Query: 314 F 314
Sbjct: 175 L 175
>gi|430003012|emb|CCF18795.1| GTP-binding protein (era) [Rhizobium sp.]
Length = 312
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 89/173 (51%), Gaps = 11/173 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG NAGKS+++N +VG KV+ VS K TT V G+ + QI DTPG+
Sbjct: 18 RSGFVALIGPTNAGKSTLLNRLVGAKVSIVSHKVQTTRAIVRGIAIHGNAQIVFMDTPGI 77
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + V SAW +V+M++ D R L ++ ++ + K
Sbjct: 78 FKPRRRLD----RAMVTSAWGGAKDADVIMLLIDSERGLRGDAEAILEGLKEV------K 127
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
Q ++L +NK+D V K +DLLK+A +E+ FM S G+G K L +L
Sbjct: 128 QPKILVLNKIDRV-KPEDLLKLAASANEAVEFEQTFMISATTGSGCKDLMDFL 179
>gi|39935764|ref|NP_948040.1| GTP-binding protein Era [Rhodopseudomonas palustris CGA009]
gi|39649617|emb|CAE28139.1| possible GTP-binding protein Era [Rhodopseudomonas palustris
CGA009]
Length = 308
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 97/186 (52%), Gaps = 11/186 (5%)
Query: 128 EEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADT 187
E E+ + V +IGAPN GKS+++N +VG+KV VSRK TT + G++ ++ +
Sbjct: 4 EHEDAATAATRCGFVALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIESGS 63
Query: 188 QICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLI 247
QI + DTPG+ K + V++AWS + +++ V+ D + +
Sbjct: 64 QIILVDTPGIFAPKRRLD----RAMVKTAWSGAHDADIVCVLLDARAGINEQAEDI---- 115
Query: 248 ERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALT 307
+ A + ++L +NK+DL+ ++K LL +A+ +++ FM S L G G+ L
Sbjct: 116 --LANLANVDRPKLLVLNKIDLIAREK-LLALAQAANQRLAFDQTFMVSALTGDGVDDLR 172
Query: 308 QYLMEQ 313
+ L Q
Sbjct: 173 KALAAQ 178
>gi|49475305|ref|YP_033346.1| GTP-binding protein Era [Bartonella henselae str. Houston-1]
gi|49238111|emb|CAF27318.1| GTP-binding protein era homolog [Bartonella henselae str.
Houston-1]
Length = 300
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 94/174 (54%), Gaps = 13/174 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG PNAGKS+++N +VGTKV+ V+ K TT + G++ + QI + DTPG+
Sbjct: 8 RSGFVVLIGMPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLIRGIVIHDNAQIVLIDTPGV 67
Query: 198 MLNKSGYSHKDV-KVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
HK + + V +AW +VL+V+ D L+ +++ ++ A
Sbjct: 68 F-----SPHKRLERAMVSAAWGGAKNADVLLVLIDAQNGLSDEVCKMLDIV------ANI 116
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
KQ ++L +NK+D V K L A +H+ + + FM S LKG+G K L L
Sbjct: 117 KQDKILVLNKIDTVAKSSLLALTAGINEHVK-FLQTFMISALKGSGCKDLLHAL 169
>gi|423714249|ref|ZP_17688508.1| GTPase Era [Bartonella vinsonii subsp. arupensis OK-94-513]
gi|395420761|gb|EJF87023.1| GTPase Era [Bartonella vinsonii subsp. arupensis OK-94-513]
Length = 301
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 95/174 (54%), Gaps = 13/174 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG PNAGKS+++N +VGTKV+ V+ K TT + G++ +TQI + DTPG+
Sbjct: 8 RSGFVVLIGMPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLIRGIVIHDNTQIVLIDTPGV 67
Query: 198 MLNKSGYSHKDV-KVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ +K + + V +AW + ++L+V+ D L+ ++ +++ +
Sbjct: 68 F-----HPYKRLERAMVSAAWGSAKSADILLVLIDAQSGLSDDVYTMLDIVKNI------ 116
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
KQ ++L +NKVD V K LL + Q + + FM S L G+G K L L
Sbjct: 117 KQDKILVLNKVDTVVKSS-LLALTTQINERVPFVQTFMISALNGSGCKDLLHAL 169
>gi|220927100|ref|YP_002502402.1| GTP-binding protein Era [Methylobacterium nodulans ORS 2060]
gi|219951707|gb|ACL62099.1| GTP-binding protein Era [Methylobacterium nodulans ORS 2060]
Length = 320
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N +VG+KV+ VSRK TT V G+ + QI DTPG+ K
Sbjct: 30 VALIGVPNAGKSTLLNSLVGSKVSIVSRKVQTTRALVRGIAMEGSAQIVFVDTPGIFAPK 89
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAWS + + ++ D + + D+ V L++R+ + PK +
Sbjct: 90 RRLD----RAMVTSAWSGAADADAVCLLIDARKGV---DAEVDALLDRLPELRRPK---I 139
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D++ +++ LL++A ++ FM S L G G+ L + L
Sbjct: 140 LVLNKIDVIARER-LLELAASLNARLPFDHTFMVSALTGDGVADLRRVL 187
>gi|328874089|gb|EGG22455.1| hypothetical protein DFA_04581 [Dictyostelium fasciculatum]
Length = 444
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 31/194 (15%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
K E K + V +IGAPNAGKSS++N ++G K+ AVS + +TT ++G++T+ TQ+
Sbjct: 119 KVEGSKRLNVAVIGAPNAGKSSLVNTIIGEKICAVSSREHTTRDNIIGILTEDKTQLVFH 178
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRH--------------LTS 238
DTPG++ K ++ V AWS V +V+++V D H LT+
Sbjct: 179 DTPGII--KHFEMKGKIREFVNMAWSVVKEADVVLLVVDAGAHQSEFSPTVGSASSALTT 236
Query: 239 PD-SRVIRLIE----------RMGKQAPPKQKRV----LCMNKVDLVTKKKDLLKVAEQF 283
D S ++ L+E +M +Q RV L +NKVDL+ +K+DLL++ +
Sbjct: 237 TDTSHIVTLLESQMLDLLKEMKMIQQQQDDIDRVKEFILVLNKVDLIVRKEDLLRLISRL 296
Query: 284 KHLPGYERIFMTSG 297
+ F+ S
Sbjct: 297 NEGSIFSDTFIISA 310
>gi|162147936|ref|YP_001602397.1| GTP-binding protein Era [Gluconacetobacter diazotrophicus PAl 5]
gi|161786513|emb|CAP56095.1| putative GTP-binding protein era homolog [Gluconacetobacter
diazotrophicus PAl 5]
Length = 305
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 98/181 (54%), Gaps = 11/181 (6%)
Query: 130 EEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQI 189
E +++ + V I+GAPNAGKS+++N M G K++ VS K TT VLG++ + ++QI
Sbjct: 4 EGIQDMTTRCGFVAIVGAPNAGKSTLLNRMAGAKLSIVSPKAQTTRFRVLGILMRGESQI 63
Query: 190 CIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIER 249
+ DTPG+ + K + V +AW+ ++ +++ D R L+ V ++ER
Sbjct: 64 LLVDTPGIFQPR----RKLDRAMVAAAWTGAEDADITLLLVDARRGLSES---VRAIVER 116
Query: 250 MGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQY 309
+ + +++ L +NK DLV ++ LL + + L E ++M S G G++ L
Sbjct: 117 LAQS---RRRVWLVLNKTDLVDRQA-LLPLTAELSALLDVEHVYMVSARSGDGVEDLLSA 172
Query: 310 L 310
L
Sbjct: 173 L 173
>gi|395790025|ref|ZP_10469533.1| GTPase Era [Bartonella taylorii 8TBB]
gi|395428247|gb|EJF94329.1| GTPase Era [Bartonella taylorii 8TBB]
Length = 299
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 93/174 (53%), Gaps = 13/174 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG PNAGKS+++N +VGTKV+ V+ K TT + G++ + QI + DTPG+
Sbjct: 8 RSGFVVLIGMPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLIRGIVVHDNAQIVLIDTPGV 67
Query: 198 MLNKSGYSHKDV-KVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
HK + + V +AW ++L+V+ DV L+ ++ +++ +
Sbjct: 68 F-----RPHKRLERAMVSAAWGGAKSADILLVLIDVQGGLSDEVCTMLDIVKNL------ 116
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
KQ ++L +NK+D V K LL + Q + + FM S L G+G K L L
Sbjct: 117 KQDKILVLNKIDTVVKSS-LLALTIQINERVKFVQTFMISALNGSGCKDLLHAL 169
>gi|406922325|gb|EKD59863.1| hypothetical protein ACD_54C01086G0003 [uncultured bacterium]
Length = 317
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 92/175 (52%), Gaps = 8/175 (4%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N MVG KV+ V+ K TT + GV + QI DTPGL +
Sbjct: 22 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRTRIRGVAMEGVAQIVFVDTPGLFRPR 81
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
VK A ++++++ + +R LT V +I+RM Q P Q
Sbjct: 82 RRLDRAMVKAAWGGA----ADADLIVLLIEANRGLTDG---VEAIIDRMKDQIPQGQAVA 134
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
L +NK+D V K + LL +AE+ + + FM S KG G+K L ++L EQ D
Sbjct: 135 LAINKIDKV-KAEVLLALAEKMNAAFPFAKTFMISAEKGYGVKDLREWLAEQLPD 188
>gi|145495077|ref|XP_001433532.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400650|emb|CAK66135.1| unnamed protein product [Paramecium tetraurelia]
Length = 449
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 24/198 (12%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMT--KADTQICIF 192
E+QK +AV IIG PN+GKS+ +N M+G ++AVS K+NTT E+ GV T K+ QI +
Sbjct: 100 EEQKFLAVSIIGPPNSGKSTFLNQMIGEPISAVSNKSNTTVSEIRGVHTDVKSGVQIELV 159
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMG- 251
DTPG+ +K K V AW + +++++ D + L V+ + ++
Sbjct: 160 DTPGVT-----KRYKFSKHFVTKAWDVIEDTNMVIILIDAIKTLDISMKNVMSRLNKIRV 214
Query: 252 ---------------KQAPPKQ-KRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMT 295
KQ+ K ++L NK+DL KK L + + + L Y++ F
Sbjct: 215 DQEQLRSYFRNEDDFKQSEEKPIPKILVFNKMDLCFNKKKLKWLQTEMEDLGKYDQTFYI 274
Query: 296 SGLKGAGLKALTQYLMEQ 313
S G G++ L QYL Q
Sbjct: 275 SSQTGYGMEELKQYLYSQ 292
>gi|110633305|ref|YP_673513.1| GTP-binding protein Era [Chelativorans sp. BNC1]
gi|110284289|gb|ABG62348.1| GTP-binding protein Era [Chelativorans sp. BNC1]
Length = 305
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IGAPNAGKS+++N +VG KV+ V+ K TT V G+ T+ TQI DTPG+
Sbjct: 12 RSGFVALIGAPNAGKSTLLNQLVGAKVSIVTHKVQTTRALVRGIATRDRTQIVFVDTPGI 71
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + V +AW +++ + D R + D+ I + + +
Sbjct: 72 FKPRRRLD----RAMVTTAWGGAKDADIVAFLLDAERGIRG-DAETI-----LDNLSEVR 121
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
Q ++L +NKVD + + K L+ AE + + ++R FM S L G G L YL E
Sbjct: 122 QPKILILNKVDRIKRDKLLVLAAEANERV-SFDRTFMISALTGDGCDDLLGYLAEAL 177
>gi|221234570|ref|YP_002517006.1| GTP-binding protein Era [Caulobacter crescentus NA1000]
gi|13959353|sp|P58071.1|ERA_CAUCR RecName: Full=GTPase Era
gi|254783291|sp|B8H630.1|ERA_CAUCN RecName: Full=GTPase Era
gi|220963742|gb|ACL95098.1| GTP-binding protein era [Caulobacter crescentus NA1000]
Length = 316
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 94/179 (52%), Gaps = 19/179 (10%)
Query: 144 IIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSG 203
IIGAPNAGKS+++N MVG KV+ V++K TT V GV + DTQI + DTPG+ +
Sbjct: 15 IIGAPNAGKSTLVNRMVGAKVSIVTQKVQTTRFPVRGVAIEGDTQIVLVDTPGIFSPRRR 74
Query: 204 YSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSR-----------VIRLIERMGK 252
+ V +AW+ E + + DV L S + V +IE G
Sbjct: 75 LD----RAMVRAAWAGSEEAEATVHLVDVQAELASRADKATPGEYRSAQDVQTIIE--GL 128
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
+A + K +L +NK+D + K+ LL VA+ F Y +FM S GAG++ LT L+
Sbjct: 129 KAADR-KVILALNKIDGI-KRDTLLAVAKDFFDTGVYSDVFMISASTGAGVEDLTAKLV 185
>gi|414162329|ref|ZP_11418576.1| GTPase Era [Afipia felis ATCC 53690]
gi|410880109|gb|EKS27949.1| GTPase Era [Afipia felis ATCC 53690]
Length = 306
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 91/171 (53%), Gaps = 11/171 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VSRK TT + G++ + + QI + DTPG+ K
Sbjct: 16 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIENNAQIVLIDTPGIFQPK 75
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D L + +E + K +
Sbjct: 76 RRLD----RAMVSTAWSGAHDADMVCVLLDARAGLDEEAESIFAKLEGV------KHPKF 125
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L +NK+DLV ++K LL +A+ +++ FM S + G G+ L + L E
Sbjct: 126 LVINKIDLVAREK-LLALAQTANERIAFQQTFMISAMSGDGVDDLRRALAE 175
>gi|395787398|ref|ZP_10466999.1| GTPase Era [Bartonella birtlesii LL-WM9]
gi|395411822|gb|EJF78343.1| GTPase Era [Bartonella birtlesii LL-WM9]
Length = 299
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 92/174 (52%), Gaps = 13/174 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG PNAGKS+++N +VGTKV+ V+ K TT + G++ + QI + DTPG+
Sbjct: 8 RSGFVVLIGMPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLIRGIVVHDNAQIVLIDTPGV 67
Query: 198 MLNKSGYSHKDV-KVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
HK + + V +AW ++L+V+ DV L+ ++ +++
Sbjct: 68 F-----RPHKRLERAMVSAAWGGAKSADILLVLIDVQSGLSDEVCTMLDIVKNF------ 116
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
KQ ++L +NK+D V K LL + Q + + FM S L G+G K L L
Sbjct: 117 KQDKILVLNKIDTVVKSS-LLALTIQINERVKFVQTFMISALNGSGCKDLLHAL 169
>gi|374853188|dbj|BAL56103.1| GTP-binding protein Era [uncultured Acidobacteria bacterium]
Length = 302
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 100/188 (53%), Gaps = 12/188 (6%)
Query: 130 EEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQI 189
E E KS V +IG PN GKS+++N ++G K+AAVS K TT + G++T+ + QI
Sbjct: 3 ENAAERVTKSGFVALIGRPNVGKSTLLNRLIGQKIAAVSDKPQTTRWRIRGILTRPEGQI 62
Query: 190 CIFDTPGLMLNKSGYSHKDVKVR-VESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIE 248
DTPG ++K + + +R VE+A + V+L L+++ DV S D V+ +++
Sbjct: 63 IFVDTPG--IHKPIHRMNERMMRAVEAAIADVDL---LLLMTDVTESFGSGDRFVLEMVK 117
Query: 249 RMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
R GK L +NK+D + K+ LL + ++++ + S L G G+ L Q
Sbjct: 118 RAGKPT------FLLLNKIDRLKDKRQLLPLIDRYRREYDFVEYLPISALTGEGVDLLLQ 171
Query: 309 YLMEQFKD 316
L E +
Sbjct: 172 SLFEHLPE 179
>gi|384218341|ref|YP_005609507.1| GTP-binding protein [Bradyrhizobium japonicum USDA 6]
gi|354957240|dbj|BAL09919.1| GTP-binding protein [Bradyrhizobium japonicum USDA 6]
Length = 308
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 89/171 (52%), Gaps = 11/171 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG KV VSRK TT + G++ + + QI + DTPG+ L K
Sbjct: 18 VALIGAPNVGKSTLVNALVGAKVTIVSRKVQTTRALIRGIVIENNAQIILVDTPGIFLPK 77
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D + + + K A ++
Sbjct: 78 RRLD----RAMVSTAWSGAHDADLVCVLLDAKTGIDEEAEAI------LTKAASVNHDKI 127
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L +NKVDLV ++K LL +A+ + + FM + + G G+ L L E
Sbjct: 128 LVINKVDLVQREK-LLALAQAANERMAFAKTFMIAAISGDGVDDLRHTLAE 177
>gi|402771630|ref|YP_006591167.1| GTP-binding protein Era [Methylocystis sp. SC2]
gi|401773650|emb|CCJ06516.1| GTP-binding protein Era [Methylocystis sp. SC2]
Length = 308
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 97/182 (53%), Gaps = 11/182 (6%)
Query: 129 EEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQ 188
++E+ ED + ++GAPNAGKS+++N +VG KV+ VSRK TT V G+ + Q
Sbjct: 4 DDELAREDTRCGFAALVGAPNAGKSTLLNQLVGAKVSIVSRKAQTTRALVRGIAIEGAAQ 63
Query: 189 ICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIE 248
I + DTPG+ K + V SA S +V+ ++ D + + D V L+
Sbjct: 64 IILVDTPGIFKPKRRLD----RAMVASALSGAADADVIALLVDSRKGI---DEEVDALLT 116
Query: 249 RMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
++ PK +L +NK+DL+ +++ LL +A+ ++ FM S LKG G+ L +
Sbjct: 117 QLQHAKAPK---LLVLNKIDLIPRER-LLALAQTLNARETFDETFMISALKGDGVGDLRK 172
Query: 309 YL 310
L
Sbjct: 173 AL 174
>gi|92117773|ref|YP_577502.1| GTP-binding protein Era [Nitrobacter hamburgensis X14]
gi|91800667|gb|ABE63042.1| GTP-binding protein Era [Nitrobacter hamburgensis X14]
Length = 305
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 92/172 (53%), Gaps = 11/172 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VSRK TT + G++ + + QI + DTPG+ K
Sbjct: 15 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVVENNAQIILVDTPGIFAPK 74
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ + D + D ++ ++ A PK +
Sbjct: 75 RRLD----RAMVSTAWSGAHDADLVCALLDARAGV---DDEADVILTKLAGVAHPK---I 124
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
L +NK+DLV ++K LL +A +E FM S L G G+ L + L E+
Sbjct: 125 LVLNKIDLVPREK-LLALASAANGRMAFEDTFMVSALSGDGVDDLRRALAER 175
>gi|16125809|ref|NP_420373.1| GTP-binding protein Era [Caulobacter crescentus CB15]
gi|13422951|gb|AAK23541.1| GTP-binding protein Era [Caulobacter crescentus CB15]
Length = 333
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 94/179 (52%), Gaps = 19/179 (10%)
Query: 144 IIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSG 203
IIGAPNAGKS+++N MVG KV+ V++K TT V GV + DTQI + DTPG+ +
Sbjct: 32 IIGAPNAGKSTLVNRMVGAKVSIVTQKVQTTRFPVRGVAIEGDTQIVLVDTPGIFSPRRR 91
Query: 204 YSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSR-----------VIRLIERMGK 252
+ V +AW+ E + + DV L S + V +IE G
Sbjct: 92 LD----RAMVRAAWAGSEEAEATVHLVDVQAELASRADKATPGEYRSAQDVQTIIE--GL 145
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
+A + K +L +NK+D + K+ LL VA+ F Y +FM S GAG++ LT L+
Sbjct: 146 KAADR-KVILALNKIDGI-KRDTLLAVAKDFFDTGVYSDVFMISASTGAGVEDLTAKLV 202
>gi|421599033|ref|ZP_16042326.1| GTPase Era [Bradyrhizobium sp. CCGE-LA001]
gi|404268861|gb|EJZ33248.1| GTPase Era [Bradyrhizobium sp. CCGE-LA001]
Length = 308
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 89/171 (52%), Gaps = 11/171 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG KV VSRK TT + G++ + + QI + DTPG+ L K
Sbjct: 18 VALIGAPNVGKSTLVNALVGAKVTIVSRKVQTTRALIRGIVIENNAQIILVDTPGIFLPK 77
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D + + + K A ++
Sbjct: 78 RRLD----RAMVSTAWSGAHDADLVCVLLDAKTGIDEEAEAI------LAKAASVNHDKI 127
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L +NKVDLV ++K LL +A+ + R FM + + G G+ + L E
Sbjct: 128 LVINKVDLVQREK-LLALAQAANERMKFARTFMIAAISGDGVDDIRTTLSE 177
>gi|402822514|ref|ZP_10871994.1| GTPase Era [Sphingomonas sp. LH128]
gi|402263935|gb|EJU13818.1| GTPase Era [Sphingomonas sp. LH128]
Length = 297
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 94/178 (52%), Gaps = 17/178 (9%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPNAGKS+++N +VG KVA S K TT +LG+ + + QI + DTPG+ +
Sbjct: 8 VAVIGAPNAGKSTLVNALVGQKVAITSAKAQTTRARLLGIALEGEAQIILADTPGIFAPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFD---VHRHLTSPDSRVIRLIERMGKQAPPKQ 258
+ V +AW + ++++ D + RH P L+E + + +
Sbjct: 68 RRLD----RAMVAAAWEGAQEADAILLIVDAVKLRRHELMP------LLETLKDRT---E 114
Query: 259 KRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
++VL +NKVD K+K LL +A++F ++ +F S L G G+ L +L Q +
Sbjct: 115 RKVLVLNKVDASAKEK-LLVLAQEFTAEVQFDEVFFVSALSGDGVPQLKTWLAGQMSE 171
>gi|209542554|ref|YP_002274783.1| GTP-binding protein Era [Gluconacetobacter diazotrophicus PAl 5]
gi|209530231|gb|ACI50168.1| GTP-binding protein Era [Gluconacetobacter diazotrophicus PAl 5]
Length = 297
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 93/169 (55%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+GAPNAGKS+++N M G K++ VS K TT VLG++ + ++QI + DTPG+ +
Sbjct: 8 VAIVGAPNAGKSTLLNRMAGAKLSIVSPKAQTTRFRVLGILMRGESQILLVDTPGIFQPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
K + V +AW+ ++ +++ D R L+ V ++ER+ + +++
Sbjct: 68 ----RKLDRAMVAAAWTGAEDADITLLLVDARRGLSES---VRAIVERLAQS---RRRVW 117
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK DLV ++ LL + + L E ++M S G G++ L L
Sbjct: 118 LVLNKTDLVDRQA-LLPLTAELSALLDVEHVYMVSARSGDGVEDLLSAL 165
>gi|398821091|ref|ZP_10579579.1| GTP-binding protein Era [Bradyrhizobium sp. YR681]
gi|398228232|gb|EJN14366.1| GTP-binding protein Era [Bradyrhizobium sp. YR681]
Length = 308
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 11/171 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG KV VSRK TT + G++ + + QI + DTPG+ L K
Sbjct: 18 VALIGAPNVGKSTLVNALVGAKVTIVSRKVQTTRALIRGIVIENNAQIILVDTPGIFLPK 77
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D + + + K A ++
Sbjct: 78 RRLD----RAMVSTAWSGAHDADLVCVLLDAKAGIDEEAEAI------LTKVASVNHDKI 127
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L +NKVDLV ++K LL +A+ + R FM S + G G+ + L E
Sbjct: 128 LVINKVDLVQREK-LLALAQAANERMKFARTFMISAISGDGVDDIRSTLAE 177
>gi|148656306|ref|YP_001276511.1| GTP-binding protein Era [Roseiflexus sp. RS-1]
gi|148568416|gb|ABQ90561.1| GTP-binding protein Era [Roseiflexus sp. RS-1]
Length = 451
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 117/236 (49%), Gaps = 25/236 (10%)
Query: 89 FGEEAQKGKLRIFQEEEEERKHRA--LAKALLQAALERQEEEEEE-----------VKEE 135
F + Q + +E E +HR LA L+Q ERQ++ EE + E
Sbjct: 100 FDPDEQLLGFEVLPADEFELEHRLERLAHFLVQRDEERQDDGEEPATALPPATRPMMPEG 159
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+S V ++G PN GKS+++N ++G KVA VS K TT + G++++ D QI DTP
Sbjct: 160 PHRSGFVALVGRPNVGKSTLLNALLGQKVAIVSPKPQTTRTAIRGILSRPDAQIVFVDTP 219
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ ++ VK A A+ +V+ +V D+ R S D R+ L+ +
Sbjct: 220 GIHEPRNRLGAYMVK----QARRAIPDADVVCMVVDISRPPGSLDERIAALVRKA----- 270
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
+ +R+L +NK+DL T+ + + + ++ L ++ S L+G GL AL ++
Sbjct: 271 -QARRMLVLNKIDLPTRSGN--EHLQAYRALAPWDMEVAVSALRGQGLDALVDEIV 323
>gi|319404019|emb|CBI77607.1| GTP-binding protein Era [Bartonella rochalimae ATCC BAA-1498]
Length = 300
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 92/174 (52%), Gaps = 13/174 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG PNAGKS+++N +VGTKV+ V+ K TT V G++ TQI + DTPG+
Sbjct: 8 RSGFVALIGVPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLVRGIVIYDKTQIILIDTPGV 67
Query: 198 MLNKSGYSHKDV-KVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
HK + + V +AW ++L+V+ D + ++ +++ +
Sbjct: 68 F-----RPHKRLERAMVSAAWGGAKNADILLVLIDAQSGFSDEVDAMLDILKSI------ 116
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+Q ++L +NK+D V K LL + + + + FM S L G+G K L YL
Sbjct: 117 EQDKILVLNKIDTVVKSS-LLALTAKVSERVNFLQTFMISALNGSGCKDLLHYL 169
>gi|83858197|ref|ZP_00951719.1| GTP-binding protein Era [Oceanicaulis sp. HTCC2633]
gi|83853020|gb|EAP90872.1| GTP-binding protein Era [Oceanicaulis sp. HTCC2633]
Length = 307
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 95/172 (55%), Gaps = 9/172 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIGAPNAGKS+++N +VG KV+ V+ K TT +V GVM Q+ + DTPG+ +
Sbjct: 12 VAIIGAPNAGKSTLVNALVGRKVSIVTPKVQTTRFQVRGVMMHGSAQLVLVDTPGVFAPR 71
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM--GKQAPPKQK 259
+ V SAW + + ++ V D L+ R + +ER+ G +A + K
Sbjct: 72 RRLD----RAMVASAWEGADDADAIVHVVDAAAQLSQA-RRTVEDVERVIDGLKA-HELK 125
Query: 260 RVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
VL +NK+DL+ K+++LL ++++ Y +FM S G +K L +L+
Sbjct: 126 AVLVLNKIDLI-KREELLDLSQKLYETGVYSDVFMISASNGDRIKDLADFLV 176
>gi|409400300|ref|ZP_11250410.1| GTPase Era [Acidocella sp. MX-AZ02]
gi|409130685|gb|EKN00432.1| GTPase Era [Acidocella sp. MX-AZ02]
Length = 297
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 11/173 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ +IGAPNAGKS+++N + G KV+ VS K TT VLG++ + +TQ+ DTPG+ K
Sbjct: 7 IALIGAPNAGKSTLLNRLTGAKVSIVSPKAQTTRARVLGILVRDETQLIFVDTPGIFAPK 66
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
K VE+AW+ ++ ++ D LT +R I K A +
Sbjct: 67 RRLD----KAMVEAAWNGAGEADLRFLLVDAKHGLTEG----VRDI--AAKLAETGARLS 116
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+DL+ +++LL +A+ + +E +FM S G G++AL Y + Q
Sbjct: 117 LVLNKIDLI-DRQELLPMAQAAAAMAKFEEVFMISAQSGDGIEALLDYCVAQM 168
>gi|58584268|ref|YP_197841.1| GTP-binding protein Era [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58418584|gb|AAW70599.1| GTPase [Wolbachia endosymbiont strain TRS of Brugia malayi]
Length = 294
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 9/178 (5%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
++QK + V I G PNAGKS++IN + G K+A V+ K TT ++ G+ +TQI D+
Sbjct: 2 KEQKCLFVTIAGLPNAGKSTLINSITGKKIAIVTPKVQTTRTQIRGIAIYNETQIIFTDS 61
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ ++ K K V+SAWSA+ +V++++ D +L + + R+ + R+
Sbjct: 62 PGIFSAET----KLEKALVKSAWSAIKGDDVILLLIDASSYLKNIE-RIKTIFTRLRHT- 115
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
K K + +NK+DLV KK +L + L ++IF S LK GL L YL E
Sbjct: 116 --KTKCIFVINKIDLV-KKPELKMTYKHLDLLYKLKKIFTISALKSDGLSDLMDYLSE 170
>gi|145528592|ref|XP_001450090.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417690|emb|CAK82693.1| unnamed protein product [Paramecium tetraurelia]
Length = 449
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 30/201 (14%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMT--KADTQICIF 192
E+QK +AV IIG PN+GKS+ +N ++G ++AVS K+NTT E+ GV T K+ Q+ +
Sbjct: 100 EEQKFLAVSIIGPPNSGKSTFLNQLIGEPISAVSNKSNTTVSEIRGVHTDLKSGVQMELV 159
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGK 252
DTPG+ +K K V AW + +++++ D + L D + ++ R+ K
Sbjct: 160 DTPGV-----TKRYKFSKHFVTKAWDVIEDTNMVIILIDAIKTL---DISMKNVMSRLNK 211
Query: 253 QAPPKQK--------------------RVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERI 292
+++ ++L NK+DL KK L + + + L Y++
Sbjct: 212 IKVDQEQLKSYFRNEDDFRASEDKPIPKILVFNKMDLCFNKKKLKWLQTEMEDLGKYDQT 271
Query: 293 FMTSGLKGAGLKALTQYLMEQ 313
F S L G G+ L QYL Q
Sbjct: 272 FYISSLTGYGMDELKQYLYSQ 292
>gi|399077158|ref|ZP_10752307.1| GTP-binding protein Era [Caulobacter sp. AP07]
gi|398035759|gb|EJL28987.1| GTP-binding protein Era [Caulobacter sp. AP07]
Length = 317
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 95/191 (49%), Gaps = 19/191 (9%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
E ++ ++ IIGAPNAGKS+++N MVG KV+ V++K TT V GV TQI
Sbjct: 3 ETTPQNTRAGFAAIIGAPNAGKSTLVNRMVGAKVSIVTQKVQTTRFPVRGVAMTGSTQII 62
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSR-------- 242
+ DTPG+ + + V SAWS EV++ + DV L + + R
Sbjct: 63 LVDTPGIFTPRRRLD----RAMVRSAWSGAEDSEVVVHLVDVQAELAARERRASAGEHRS 118
Query: 243 ---VIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLK 299
V +IE G +A +Q +L +NK+D V K+ LL V + Y +FM S
Sbjct: 119 VQDVQTIIE--GLKAAGRQV-ILALNKIDGV-KRDTLLAVTQDLFETGVYSEVFMISAST 174
Query: 300 GAGLKALTQYL 310
GAG+ L L
Sbjct: 175 GAGVDDLMAKL 185
>gi|148553135|ref|YP_001260717.1| GTP-binding protein Era [Sphingomonas wittichii RW1]
gi|148498325|gb|ABQ66579.1| GTP-binding protein Era [Sphingomonas wittichii RW1]
Length = 297
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 11/173 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++GAPNAGKS+++N +VG KVA VS K TT ++GV ++QI + DTPG+ +
Sbjct: 8 VAVVGAPNAGKSTLVNALVGQKVAIVSPKAQTTRTRLIGVAIAGESQILLVDTPGIFAPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW +++ V D +T R+ L++ + ++ PK +
Sbjct: 68 RRLD----RAMVAAAWGGAQDADLIAFVIDAKTGIT---HRIGELLDTLAQRREPK---L 117
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
+ +NKVD+ +K+ LL++A + + E IFM S G G+ L Q L ++
Sbjct: 118 VVLNKVDICSKES-LLELAVRLQEKLAPEAIFMVSAATGDGVADLRQTLADRV 169
>gi|299135101|ref|ZP_07028292.1| GTP-binding protein Era [Afipia sp. 1NLS2]
gi|298590078|gb|EFI50282.1| GTP-binding protein Era [Afipia sp. 1NLS2]
Length = 306
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 92/171 (53%), Gaps = 11/171 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VSRK TT + G++ + + QI + DTPG+ K
Sbjct: 16 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEDNAQIVLVDTPGIFTPK 75
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D L + +E + K +
Sbjct: 76 RRLD----RAMVSTAWSGAHDADMVCVLLDARAGLDEEADAIFAKLEAV------KHPKF 125
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L +NK+DLV ++K LL +A++ +++ FM + + G G+ L + L E
Sbjct: 126 LVINKIDLVAREK-LLALAQKANERIAFKQTFMIAAISGDGVDDLRRALAE 175
>gi|347761797|ref|YP_004869358.1| GTP-binding protein [Gluconacetobacter xylinus NBRC 3288]
gi|347580767|dbj|BAK84988.1| GTP-binding protein [Gluconacetobacter xylinus NBRC 3288]
Length = 305
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 92/170 (54%), Gaps = 13/170 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+GAPNAGKS+++N M GTK++ VS K TT VLG++ + TQI + DTPG+ K
Sbjct: 16 VAIVGAPNAGKSTLLNRMAGTKLSIVSPKAQTTRFRVLGILMRQRTQILLVDTPGIFQPK 75
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIE-RMGKQAPPKQKR 260
K + V +AW+ + ++ +++ D +T +R I R+ +Q K++
Sbjct: 76 ----RKLDRAMVAAAWTGSDDADITLLIVDARAGMTD----ALRAIATRLAEQ---KRRL 124
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK DLV K+ LL + + + E +FM S G G+ L L
Sbjct: 125 WLVLNKTDLV-KRDTLLPLTAELSSILPVEHVFMVSARSGEGVDDLLDRL 173
>gi|323137543|ref|ZP_08072620.1| GTP-binding protein Era [Methylocystis sp. ATCC 49242]
gi|322397169|gb|EFX99693.1| GTP-binding protein Era [Methylocystis sp. ATCC 49242]
Length = 307
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 96/187 (51%), Gaps = 11/187 (5%)
Query: 129 EEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQ 188
EE ++ + ++GAPNAGKS+++N +VG KV+ VSRK TT V G+ Q
Sbjct: 3 EENAAGQETRCGFAALVGAPNAGKSTLLNQLVGAKVSIVSRKAQTTRALVRGIAIDGPAQ 62
Query: 189 ICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIE 248
I + DTPG+ K + V SA S +V+ ++ D R L D V ++
Sbjct: 63 IILVDTPGIFKPKRRLD----RAMVASALSGATDADVVALLVDARRGL---DEEVESILT 115
Query: 249 RMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
++ + PK +L +NK+D++ ++K LL +A + +E FM S L G G+ L
Sbjct: 116 QLAEVKAPK---ILVLNKIDVIAREK-LLALAAKMNERGKFEETFMVSALTGDGVGDLRH 171
Query: 309 YLMEQFK 315
L ++ K
Sbjct: 172 ALGKRMK 178
>gi|209884976|ref|YP_002288833.1| GTP-binding protein Era [Oligotropha carboxidovorans OM5]
gi|226741225|sp|B6JGG2.1|ERA_OLICO RecName: Full=GTPase Era
gi|209873172|gb|ACI92968.1| GTP-binding protein Era [Oligotropha carboxidovorans OM5]
Length = 308
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VSRK TT + G++ + + QI + DTPG+ K
Sbjct: 18 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVVEGNAQIVLVDTPGIFTPK 77
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D L + +E + K +
Sbjct: 78 RRLD----RAMVSTAWSGAHDADMVCVLLDARAGLDEEAEAIFTKLEAV------KHPKF 127
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+DLV ++K LL +A++ + FM + L G G+ L + L
Sbjct: 128 LVINKIDLVAREK-LLALAQRANERIAFRETFMVAALSGDGVDDLRRAL 175
>gi|427428071|ref|ZP_18918113.1| GTP-binding protein Era [Caenispirillum salinarum AK4]
gi|425882772|gb|EKV31451.1| GTP-binding protein Era [Caenispirillum salinarum AK4]
Length = 322
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 91/170 (53%), Gaps = 13/170 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ ++GAPNAGKS+++N ++GTKV+ VS K TT V G+ + +Q+ DTPG+
Sbjct: 33 IAVLGAPNAGKSTLVNTIIGTKVSIVSPKVQTTRSIVRGIAMEGQSQLIFVDTPGIF--- 89
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIR-LIERMGKQAPPKQKR 260
+ + + V +AW+ +++M++ D R + +I L+E K+K
Sbjct: 90 -KPNRRMERAMVSAAWTGAADADMVMLLVDARRGFSEDVKAIIDGLLE-------AKRKA 141
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
VL +NKVD V + LL ++ + +FM S LKG G++ L YL
Sbjct: 142 VLVINKVDTVARPS-LLDLSADLFDTGAFSDVFMISALKGDGVRDLVDYL 190
>gi|406989922|gb|EKE09631.1| hypothetical protein ACD_16C00130G0036 [uncultured bacterium]
Length = 296
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 11/166 (6%)
Query: 144 IIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSG 203
+IGAPN GKS+++N +VG+KV VS K TT +LG+ + + Q+ DTPG+
Sbjct: 9 VIGAPNVGKSTLVNALVGSKVTIVSPKVQTTRSRILGIALEKNAQVIFVDTPGIFETP-- 66
Query: 204 YSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLC 263
+ K V++AW ++N + +MV+ DV R ++ +E+ K+ V+
Sbjct: 67 -KRRLEKAMVKNAWESLNDADGIMVLVDVSRKTFEETDLILNHLEK------KKKNVVIV 119
Query: 264 MNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQY 309
+NK+DL+ + + LL +A+ F P E FM S LK G+ + +Y
Sbjct: 120 LNKIDLIPRNR-LLSIAQHFSR-PNVEYTFMISALKRDGIYDIKKY 163
>gi|254440407|ref|ZP_05053901.1| GTP-binding protein Era [Octadecabacter antarcticus 307]
gi|198255853|gb|EDY80167.1| GTP-binding protein Era [Octadecabacter antarcticus 307]
Length = 313
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 9/178 (5%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
Q++ V +IG PNAGKS+++N MVG KV+ V+ K TT + GV + D+QI DTPG
Sbjct: 14 QRAGFVALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAIEGDSQIVFVDTPG 73
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
L K + V +AWS V+ +V++++ + HR +T V ++ER+G
Sbjct: 74 LFQPKRRLD----RAMVAAAWSGVSDSDVVVLMIEAHRGITKG---VEAILERLGDVGKG 126
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
+ L +NK+D V + LL + ++ + F+ S KG G L +L E+
Sbjct: 127 RTI-ALAINKIDRV-EAPVLLGLTKEMNERFAFSETFLISAEKGHGAGTLRAWLAERM 182
>gi|348537399|ref|XP_003456182.1| PREDICTED: GTPase Era, mitochondrial-like [Oreochromis niloticus]
Length = 528
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 83/151 (54%), Gaps = 7/151 (4%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ K + V IIGAPNAGKS++ N ++G KV AVS+K +TT LGV+T+ TQI + DT
Sbjct: 184 ENSKVLKVAIIGAPNAGKSTLSNQLLGRKVFAVSKKVHTTRSRALGVLTEEYTQIILLDT 243
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSP--DSRVIRLIERMGK 252
PGL H+ K + W+ V ++++V+ DV S D V++ + +
Sbjct: 244 PGLTTPSKVKRHQLEKSLLVDPWNTVKEADLMVVMVDVADKWMSSRLDFEVLKCLAQH-- 301
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQF 283
P VL +NKVDLV K LL + Q
Sbjct: 302 ---PDIPAVLVLNKVDLVKAKDRLLDITAQL 329
>gi|395766884|ref|ZP_10447422.1| GTPase Era [Bartonella doshiae NCTC 12862]
gi|395415496|gb|EJF81930.1| GTPase Era [Bartonella doshiae NCTC 12862]
Length = 303
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 90/174 (51%), Gaps = 13/174 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG PNAGKS+++N +VGTKV+ V+ K TT + G++ D QI + DTPG+
Sbjct: 10 RSGFVVLIGIPNAGKSTLVNQLVGTKVSIVTHKVQTTRTLIRGIVIHDDAQIVLIDTPGV 69
Query: 198 MLNKSGYSHKDV-KVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
HK + + V +AW +VL+V+ D + ++ ++ M
Sbjct: 70 F-----RPHKRLERAMVSAAWGGAKGADVLLVLIDAQSGFSDEVCTMLDIVGNM------ 118
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
KQ ++L +NK+D V K LL + + + + FM S L G+G K L L
Sbjct: 119 KQDKILVLNKIDAVAKSS-LLTLTAKINERVKFVQTFMISALNGSGCKDLLHAL 171
>gi|357025781|ref|ZP_09087893.1| GTPase Era [Mesorhizobium amorphae CCNWGS0123]
gi|355542290|gb|EHH11454.1| GTPase Era [Mesorhizobium amorphae CCNWGS0123]
Length = 310
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IGAPNAGKS+++N +VG KV+ V+ K TT V G+ T + QI DTPG+
Sbjct: 17 RSGFVALIGAPNAGKSTLVNQLVGAKVSIVTHKVQTTRAIVRGIATHENAQIVFVDTPGI 76
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K V +AW +V++++ D R + D+ I +ER+ +
Sbjct: 77 FKPKRRLD----TAMVTTAWGGAKDADVVLLLIDAERGIRG-DADAI--LERLKDV---R 126
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
Q VL +NKVD V + L A + +P ++R FM S L G+G K L YL E
Sbjct: 127 QPMVLILNKVDRVKHEALLALAAAANERVP-FKRTFMVSALTGSGCKDLLDYLAETL 182
>gi|325181428|emb|CCA15844.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325193041|emb|CCA27412.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 458
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 103/176 (58%), Gaps = 10/176 (5%)
Query: 105 EEERKHRALAKALLQAALERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKV 164
EE +K L A +A L R+ E +E + + K++ V +IG PNAGKSSIIN+++ + V
Sbjct: 121 EENKKFTNLKDAP-EAVLNREFNEPDEPR--NSKALEVAVIGRPNAGKSSIINFLLRSNV 177
Query: 165 AAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFE 224
+AVS+K NTT VLGV+T+ +TQI DTPGL+ K SH V+ V +A V +
Sbjct: 178 SAVSQKYNTTRERVLGVLTEKNTQITFHDTPGLI--KPQESHLYVRSLVTTAADTVESVD 235
Query: 225 VLMVVFDVHRHLTSPDSRVIRLIER-MGKQAPPKQKRVLCMNKVDLVTKKKDLLKV 279
+ ++V D + L D ++ +E+ + A +L MNK DLV +++DL V
Sbjct: 236 LSLLVVDAVKRL---DDSALQAMEKILIGSAQVGAPTMLVMNKYDLV-RERDLKSV 287
>gi|414167172|ref|ZP_11423401.1| GTPase Era [Afipia clevelandensis ATCC 49720]
gi|410890989|gb|EKS38787.1| GTPase Era [Afipia clevelandensis ATCC 49720]
Length = 308
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 98/184 (53%), Gaps = 11/184 (5%)
Query: 127 EEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKAD 186
+E+ E ++ + V +IGAPN GKS+++N +VG+KV VS+K TT + G++ + +
Sbjct: 3 DEQHENSAKETRCGFVALIGAPNVGKSTLVNALVGSKVTIVSKKVQTTRALIRGIVIEDN 62
Query: 187 TQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRL 246
QI + DTPG+ K + V +AWS + +++ + D + ++R
Sbjct: 63 AQIILVDTPGIFAPKRRLD----RAMVSTAWSGAHDADLVCALIDARAGIDEEADAILRK 118
Query: 247 IERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
+E + ++L +NK+DLV ++K LL +A++ + + FM S L G G+ L
Sbjct: 119 LEAV------NHPKILVLNKIDLVPREK-LLALAQKANERLKFTQTFMVSALSGDGVDDL 171
Query: 307 TQYL 310
+ L
Sbjct: 172 RRAL 175
>gi|337741390|ref|YP_004633118.1| GTP-binding protein Era [Oligotropha carboxidovorans OM5]
gi|386030406|ref|YP_005951181.1| GTP-binding protein Era [Oligotropha carboxidovorans OM4]
gi|336095474|gb|AEI03300.1| GTP-binding protein Era [Oligotropha carboxidovorans OM4]
gi|336099054|gb|AEI06877.1| GTP-binding protein Era [Oligotropha carboxidovorans OM5]
Length = 304
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VSRK TT + G++ + + QI + DTPG+ K
Sbjct: 14 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVVEGNAQIVLVDTPGIFTPK 73
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D L + +E + K +
Sbjct: 74 RRLD----RAMVSTAWSGAHDADMVCVLLDARAGLDEEAEAIFTKLEAV------KHPKF 123
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+DLV ++K LL +A++ + FM + L G G+ L + L
Sbjct: 124 LVINKIDLVAREK-LLALAQRANERIAFRETFMVAALSGDGVDDLRRAL 171
>gi|254453314|ref|ZP_05066751.1| GTP-binding protein Era [Octadecabacter arcticus 238]
gi|198267720|gb|EDY91990.1| GTP-binding protein Era [Octadecabacter arcticus 238]
Length = 317
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 9/178 (5%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
Q++ V +IG PNAGKS+++N MVG KV+ V+ K TT + GV + D+QI DTPG
Sbjct: 18 QRAGFVALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAIEGDSQIVFVDTPG 77
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
L K + V +AWS V+ +V++++ + HR +T V ++ER+G
Sbjct: 78 LFQPKRRLD----RAMVAAAWSGVSDADVVVLMIEAHRGITKG---VEAILERLGDVGKG 130
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
+ L +NK+D V + LL + ++ + F+ S KG G L +L E+
Sbjct: 131 RTI-ALAINKIDRV-EAPVLLGLTKEMNERFAFAETFLISAEKGHGAGTLRTWLAERM 186
>gi|340778699|ref|ZP_08698642.1| GTPase Era [Acetobacter aceti NBRC 14818]
Length = 299
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 90/180 (50%), Gaps = 11/180 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ + ++GAPNAGKS+++N M G K++ VS K TT VLG++ + TQI I DT
Sbjct: 3 EETRCGFAALVGAPNAGKSTLLNRMAGAKLSIVSPKAQTTRFRVLGILIRHATQILIVDT 62
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ K K + V +AWS +V +++ D L + VI + + G++
Sbjct: 63 PGIFRPK----RKLDRAMVAAAWSGSEDADVTLLLIDAKSGLDDATTAVIEQLAKAGRRV 118
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK DLVT + L A + +P E +FM S G G+ L L E
Sbjct: 119 ------WLVLNKTDLVTPQSLLPLTAAVAEMIP-VEHVFMISARTGNGVDDLLDRLAESL 171
>gi|432899957|ref|XP_004076656.1| PREDICTED: GTPase Era, mitochondrial-like [Oryzias latipes]
Length = 433
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 7/150 (4%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D K + V +IGAPNAGKS++ N ++G KV AVS+K +TT LGV+T+ DTQI + DTP
Sbjct: 94 DPKVLKVAVIGAPNAGKSTLSNQLLGRKVFAVSKKVHTTRARALGVLTEDDTQIILLDTP 153
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDV-HRHLTSP-DSRVIRLIERMGKQ 253
GL H+ K + W V ++++V+ D R + S D V++ + +
Sbjct: 154 GLTTPSKAKRHQLEKTLLVDPWDTVKEADLMVVMVDAGDRWMCSRLDLEVLKCLAQH--- 210
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQF 283
P+ +L +NKVDLV K LL +
Sbjct: 211 --PQIPAILVLNKVDLVKAKDRLLDITAHL 238
>gi|316934143|ref|YP_004109125.1| GTP-binding protein Era [Rhodopseudomonas palustris DX-1]
gi|315601857|gb|ADU44392.1| GTP-binding protein Era [Rhodopseudomonas palustris DX-1]
Length = 308
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 92/172 (53%), Gaps = 11/172 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VSRK TT + G++ + +QI + DTPG+ K
Sbjct: 18 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEDASQIILVDTPGIFAPK 77
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V++AWS + +++ V+ D + + + A + ++
Sbjct: 78 RRLD----RAMVKTAWSGAHDADLVCVLLDARAGINEQAEDI------LANLANVDRPKL 127
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
L +NK+DL+ ++K LL +A+ +++ FM S L G G+ L + L Q
Sbjct: 128 LVLNKIDLIAREK-LLALAQAANQRLAFDQTFMVSALTGDGVDDLRKALAAQ 178
>gi|83951644|ref|ZP_00960376.1| GTP-binding protein Era [Roseovarius nubinhibens ISM]
gi|83836650|gb|EAP75947.1| GTP-binding protein Era [Roseovarius nubinhibens ISM]
Length = 301
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ +IG PNAGKS+++N MVG KV+ V+ K TT + GV + + Q+ DTPGL +
Sbjct: 8 IALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVALEGEAQLVFVDTPGLFKPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW + +V++++ + HR LT R++ + + + P
Sbjct: 68 RRLD----RAMVAAAWGGASDADVVVLLIEAHRGLTEGVERILEGLGDVTRGRPV----A 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+D V K ++LL + E+ + FM S +G G+ L ++L EQ
Sbjct: 120 LAINKIDRV-KSEELLALTEKMNTRHEFVETFMISAERGHGVDDLRKWLAEQL 171
>gi|357631310|gb|EHJ78888.1| hypothetical protein KGM_12132 [Danaus plexippus]
Length = 349
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 29/221 (13%)
Query: 117 LLQAALERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTH 176
LL+A Q ++E K++ K V V I+GAPNAGKS++IN +V K+ A S K +TTT
Sbjct: 18 LLRALYSSQPQQES--KKDIGKVVNVAIVGAPNAGKSTLINRIVDRKICAASNKVHTTTK 75
Query: 177 EVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHL 236
V + DTQI DTPG++ K +K + +++ ++ +V+ VV DV
Sbjct: 76 MVRAMCYDKDTQIVFLDTPGVVNTKEQKKYKLPESMLQACQKSLRCADVIGVVHDVSNRW 135
Query: 237 TSP--DSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKH-------LP 287
T ++ V++++E M K+ P L +NKVD++ K LL + + +P
Sbjct: 136 TKNYLNTDVVKIVE-MVKEIP----SFLILNKVDVLKSKAQLLTIIRNLTNGIIAGNPIP 190
Query: 288 ----------GYER---IFMTSGLKGAGLKALTQYLMEQFK 315
GY +F+ S + G G+ + QYL+ K
Sbjct: 191 NTDKKSKIEKGYSYFSDVFLVSAMNGDGVGDIKQYLINNAK 231
>gi|420155009|ref|ZP_14661880.1| GTP-binding protein Era [Clostridium sp. MSTE9]
gi|394759851|gb|EJF42514.1| GTP-binding protein Era [Clostridium sp. MSTE9]
Length = 311
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 93/185 (50%), Gaps = 10/185 (5%)
Query: 128 EEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADT 187
E +++E K+ + I+G PN GKSSI+N ++G KVA VS K TT ++GV+T+ DT
Sbjct: 3 ELNQMQETAGKTAFIAIVGRPNVGKSSILNRLLGQKVAIVSSKPQTTRTRIMGVLTEGDT 62
Query: 188 QICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLI 247
Q+ DTPGL ++ VK ES V + ++V + ++ D ++
Sbjct: 63 QLVFLDTPGLHKPRTRLGDYMVKSVTES----VAGVDACLLVAEAGTRISPADHELMEKF 118
Query: 248 ERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALT 307
MG A +L +NK+D++ K L+ F G+E + S G G+ L
Sbjct: 119 SSMGLPA------ILAINKIDMLGDKSPLMAQIGAFAQKFGFEAVVPVSAKDGNGMTLLK 172
Query: 308 QYLME 312
Q LM+
Sbjct: 173 QELMK 177
>gi|295690017|ref|YP_003593710.1| GTP-binding protein Era [Caulobacter segnis ATCC 21756]
gi|295431920|gb|ADG11092.1| GTP-binding protein Era [Caulobacter segnis ATCC 21756]
Length = 316
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 92/179 (51%), Gaps = 19/179 (10%)
Query: 144 IIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSG 203
IIGAPNAGKS+++N MVG KV+ V++K TT V GV DTQI + DTPG+ +
Sbjct: 15 IIGAPNAGKSTLVNRMVGAKVSIVTQKVQTTRFPVRGVAIAGDTQIVLVDTPGIFSPRRR 74
Query: 204 YSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSR-----------VIRLIERMGK 252
+ V +AW+ E + + DV L S + V +IE G
Sbjct: 75 LD----RAMVRAAWAGSEEAEATVHLVDVQAELASRADKATPGEYRSAQDVQTIIE--GL 128
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
+A + K +L +NK+D + K+ LL +A+ F Y +FM S GAG+ LT L+
Sbjct: 129 KAADR-KVILALNKIDGI-KRDTLLAIAKDFFDTGVYTDVFMISAQTGAGVDDLTAKLV 185
>gi|163760594|ref|ZP_02167675.1| GTP-binding protein Era [Hoeflea phototrophica DFL-43]
gi|162282209|gb|EDQ32499.1| GTP-binding protein Era [Hoeflea phototrophica DFL-43]
Length = 312
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 87/173 (50%), Gaps = 11/173 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IGAPNAGKS+++N +VG KV+ VS K TT V G+ QI DTPG+
Sbjct: 19 RSGFVALIGAPNAGKSTLVNQLVGAKVSIVSHKVQTTRAIVRGIAIHERAQIVFIDTPGI 78
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K + V +AW ++++V+ D R + D+ + + A
Sbjct: 79 FAPKRRLD----RAMVTTAWGGAKDGDMVLVLIDAERGIKG-DAEAL-----LDSLADVH 128
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
Q+++L +NKVD V K+ LL + Q ++ FM S L G+G L YL
Sbjct: 129 QRKILVLNKVDRV-KRDTLLALTAQCHEKAQFDETFMISALTGSGCADLMDYL 180
>gi|296444864|ref|ZP_06886826.1| GTP-binding protein Era [Methylosinus trichosporium OB3b]
gi|296257532|gb|EFH04597.1| GTP-binding protein Era [Methylosinus trichosporium OB3b]
Length = 312
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 11/180 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D + V ++GAPNAGKS+++N +VG KV+ VSRK TT V G+ ++QI + DTP
Sbjct: 16 DTRCGFVALVGAPNAGKSTLLNQLVGAKVSIVSRKAQTTRALVRGIAISGESQIILVDTP 75
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K + + V SA S + ++++ D R L D+ V +I ++ + +
Sbjct: 76 GIFAPK----RRLERAMVASALSGAGDADAVVLLIDARRGL---DAEVEEIIAKLNELSA 128
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFK 315
PK +L +NKVD+V ++ LL + + +M S L G G+ L L K
Sbjct: 129 PK---ILVLNKVDVVPRES-LLGLTAAVTRQADFAETYMISALNGDGVPDLLAKLASMMK 184
>gi|407777100|ref|ZP_11124371.1| GTPase Era [Nitratireductor pacificus pht-3B]
gi|407301265|gb|EKF20386.1| GTPase Era [Nitratireductor pacificus pht-3B]
Length = 313
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 93/175 (53%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ +S V +IGAPNAGKS+++N +VG KV+ V+ K TT + G+ T QI DTP
Sbjct: 18 ETRSGFVALIGAPNAGKSTLLNQLVGAKVSIVTHKVQTTRAIIRGIATHDAAQIVFIDTP 77
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + + V +AW +++ ++ D R + D+ I ++R+ A
Sbjct: 78 GIFNPRRRLD----RAMVTTAWGGAKDADIVALLIDAERGIKG-DAAAI--LDRLKDVAQ 130
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
PK VL +NK+D V K++ LL++A ++R FM S L G+G + Y+
Sbjct: 131 PK---VLILNKIDRV-KRETLLELAALANEKVAFDRTFMLSALNGSGCRDFLDYM 181
>gi|395780134|ref|ZP_10460601.1| GTPase Era [Bartonella washoensis 085-0475]
gi|423711249|ref|ZP_17685569.1| GTPase Era [Bartonella washoensis Sb944nv]
gi|395415163|gb|EJF81598.1| GTPase Era [Bartonella washoensis Sb944nv]
gi|395419401|gb|EJF85701.1| GTPase Era [Bartonella washoensis 085-0475]
Length = 303
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 92/174 (52%), Gaps = 13/174 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG PN GKS+++N +VGTKV+ V+ K TT + G++ DTQI + DTPG+
Sbjct: 10 RSGFVVLIGMPNVGKSTLVNQLVGTKVSIVTHKVQTTRTLIRGIVIHDDTQIVLIDTPGV 69
Query: 198 MLNKSGYSHKDV-KVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
HK + + V +AW ++L+V+ D L+ ++ +++ +
Sbjct: 70 FC-----PHKRLERAMVSAAWGGAKHADILLVLIDAQNGLSDEVCAMLDIVKNI------ 118
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
++ ++L +NK+D V K LL + + + + FM S L G+G K L L
Sbjct: 119 RKDKILVLNKIDTVAKSS-LLTLTAKINERVKFSQTFMISALNGSGCKDLLHSL 171
>gi|338738022|ref|YP_004674984.1| GTP-binding protein [Hyphomicrobium sp. MC1]
gi|337758585|emb|CCB64410.1| GTP-binding protein [Hyphomicrobium sp. MC1]
Length = 311
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 10/169 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N +VG KVA VS K TT + G+ + ++QI DT G+ K
Sbjct: 20 VAVIGPTNAGKSTLVNALVGAKVAIVSHKVQTTRAPIRGIAMEGNSQIVFIDTAGIFNPK 79
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V++AW + + +++V D L V ++ER+ PK +
Sbjct: 80 RRLD----RAMVDAAWGGLEDADAVLLVLDAAASL---GEDVEGIVERLKSVRMPK---I 129
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ +NK+D V K LL++A+ +RIFM S L+G G+K L YL
Sbjct: 130 VVLNKIDRVEDKPKLLELAKTLDERLSPDRIFMISALEGKGVKDLLTYL 178
>gi|46578469|ref|YP_009277.1| GTP-binding protein Era [Desulfovibrio vulgaris str. Hildenborough]
gi|120603947|ref|YP_968347.1| GTP-binding protein Era [Desulfovibrio vulgaris DP4]
gi|387151953|ref|YP_005700889.1| GTP-binding protein Era [Desulfovibrio vulgaris RCH1]
gi|81567485|sp|Q72G11.1|ERA_DESVH RecName: Full=GTPase Era
gi|189037267|sp|A1VHK4.1|ERA_DESVV RecName: Full=GTPase Era
gi|46447880|gb|AAS94536.1| GTP-binding protein Era [Desulfovibrio vulgaris str. Hildenborough]
gi|120564176|gb|ABM29920.1| GTP-binding protein Era [Desulfovibrio vulgaris DP4]
gi|311232397|gb|ADP85251.1| GTP-binding protein Era [Desulfovibrio vulgaris RCH1]
Length = 308
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 96/173 (55%), Gaps = 10/173 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N ++G KVA V+ K TT ++++G++++ D Q+ DTPG+ +
Sbjct: 11 VALIGPPNAGKSTLLNALIGQKVAIVTSKPQTTRNQIVGILSRKDAQVVFMDTPGIHQLR 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSP---DSRVIRLIERMGKQAPPKQ 258
+ K+ +++AW ++N + L+V+ D ++ P D + L+E + + P
Sbjct: 71 GRLN----KMLLQTAWQSMNAADALIVMLDGDLYIRKPDLLDRDIAPLVEPIAAETRPV- 125
Query: 259 KRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
V+ +NK+DL K +L + E+ + +F S L G+ L + ++
Sbjct: 126 --VVVVNKIDLFRDKSKMLPLLERLSAMWPKAEVFPASALNKDGMDHLLRLIV 176
>gi|213511324|ref|NP_001133545.1| GTPase Era, mitochondrial [Salmo salar]
gi|322518583|sp|B5X2B8.1|ERAL1_SALSA RecName: Full=GTPase Era, mitochondrial; AltName: Full=ERA-like
protein 1; Flags: Precursor
gi|209154434|gb|ACI33449.1| GTP-binding protein era homolog [Salmo salar]
gi|223649262|gb|ACN11389.1| GTP-binding protein era homolog [Salmo salar]
Length = 457
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 83/147 (56%), Gaps = 7/147 (4%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ K + V IIGAPNAGKS++ N ++G KV AVS+K +TT LGV+T+ DTQI + DT
Sbjct: 104 ENSKVLRVAIIGAPNAGKSTLSNQLLGRKVFAVSKKVHTTRARALGVLTEDDTQIILLDT 163
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSP--DSRVIRLIERMGK 252
PGL H+ K +E W+ V +++V+ DV D V++ + +
Sbjct: 164 PGLTTPTKVKRHQLEKSLLEDPWNTVKEAGLVVVMVDVSDKWACNKLDFEVLKCLTQH-- 221
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKV 279
P VL +NKVDL+ K LL++
Sbjct: 222 ---PDVPAVLVLNKVDLLKSKSRLLEI 245
>gi|449480193|ref|XP_004177081.1| PREDICTED: GTPase Era, mitochondrial-like [Taeniopygia guttata]
Length = 341
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 114 AKALLQAALERQEEEEEEVKEEDQ--KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKT 171
A LL E Q+ E E+ Q K + + IIGAPNAGKS++ N ++G KV VSRK
Sbjct: 9 ACQLLLFPAEEQKRLLESRPEQPQQPKVLRIAIIGAPNAGKSTLSNQLLGRKVFPVSRKV 68
Query: 172 NTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFD 231
+TT + GV+T DTQ+ I DTPGL H + + W ++ ++++V+ D
Sbjct: 69 HTTRCKAWGVITHEDTQLIILDTPGLTNPLKAKRHNLDETMLTDPWDSMKHADLVLVLVD 128
Query: 232 VHRHLT--SPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVA 280
V H T S V++ + + P VL +NKVD++ KK LL++A
Sbjct: 129 VSDHWTRNSLSKEVLKCLSQF-----PHIPSVLVLNKVDILKKKFLLLEIA 174
>gi|349686513|ref|ZP_08897655.1| GTPase Era [Gluconacetobacter oboediens 174Bp2]
Length = 304
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 13/170 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+GAPNAGKS+++N M GTK++ VS K TT VLG++ + TQI + DTPG+ +
Sbjct: 15 VAIVGAPNAGKSTLLNRMAGTKLSIVSPKAQTTRFRVLGILMRNHTQILLVDTPGIFQPR 74
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIE-RMGKQAPPKQKR 260
K + V +AW+ + ++ +++ D +T +R I R+ +Q K++
Sbjct: 75 ----RKLDRAMVAAAWTGSDDADITLLIVDARAGMTD----ALRAIATRLAEQ---KRRL 123
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK DLV + L AE LP E +FM S G G+ L L
Sbjct: 124 WLVLNKTDLVRRDALLPLTAELSSILP-VEHVFMVSARSGEGVDDLLDRL 172
>gi|393719576|ref|ZP_10339503.1| GTPase Era [Sphingomonas echinoides ATCC 14820]
Length = 304
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 88/169 (52%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+GAPNAGKS+++N +VG KVA VS K TT ++GV + +TQ+ + DTPG+ K
Sbjct: 15 VAILGAPNAGKSTLVNALVGQKVAIVSPKAQTTRVRLMGVAIEGETQLLLVDTPGIFEPK 74
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V++AW +VL +V D L ++V + E + + PK
Sbjct: 75 RRLD----RAMVQAAWGGAEGADVLALVVDAKGGL---GAKVTDIAEAIKDRREPK---Y 124
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NKVDL K K LL AE+ + + F S G GL L +L
Sbjct: 125 LILNKVDLADKGKLLLH-AEKLTGMVEFAETFFVSAATGDGLPELKAHL 172
>gi|89053015|ref|YP_508466.1| GTP-binding protein Era [Jannaschia sp. CCS1]
gi|88862564|gb|ABD53441.1| GTP-binding protein Era [Jannaschia sp. CCS1]
Length = 312
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 11/170 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ +IG PNAGKS+++N MVG KV+ V+ K TT + GV + D+Q+ DTPGL +
Sbjct: 18 IALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGDSQLVFVDTPGLFRPR 77
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVI-RLIERMGKQAPPKQKR 260
+ V++AW+ +V++++ + HR LT ++ L ER G +K
Sbjct: 78 RRLD----RAMVKAAWTGAADADVVVLLIEAHRGLTDGVQAILDGLKERTG-----DRKV 128
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V LLK+ E ++ +M S KG G+K L +L
Sbjct: 129 ALAINKIDRVDAPV-LLKLTEDLNAAYPFDETYMISAEKGHGVKELRTWL 177
>gi|13476443|ref|NP_108013.1| GTP-binding protein Era [Mesorhizobium loti MAFF303099]
gi|21263601|sp|Q985A5.1|ERA_RHILO RecName: Full=GTPase Era
gi|14027204|dbj|BAB54158.1| GTP-binding protein; Era [Mesorhizobium loti MAFF303099]
Length = 310
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 122 LERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGV 181
+ER + E + S V +IGAPNAGKS+++N +VG KV+ V+ K TT V G+
Sbjct: 1 MERGMTDIETAETPATHSGFVALIGAPNAGKSTLVNQLVGAKVSIVTHKVQTTRAIVRGI 60
Query: 182 MTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDS 241
T + QI DTPG+ K V +AW ++++++ D R + D+
Sbjct: 61 ATHDNAQIVFVDTPGIFKPKRRLD----TAMVTTAWGGAKDADIVLLLIDAERGIRG-DA 115
Query: 242 RVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGA 301
I +ER+ +Q L +NKVD V K + LL ++ ++R FM S L G+
Sbjct: 116 DAI--LERLKDV---RQPMALILNKVDRV-KHETLLALSAAANEKVPFKRTFMVSALTGS 169
Query: 302 GLKALTQYLMEQF 314
G K L YL +
Sbjct: 170 GCKDLLDYLAQAL 182
>gi|326387677|ref|ZP_08209283.1| GTP-binding protein Era [Novosphingobium nitrogenifigens DSM 19370]
gi|326207723|gb|EGD58534.1| GTP-binding protein Era [Novosphingobium nitrogenifigens DSM 19370]
Length = 312
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPNAGKS+++N +VG KVA VS K TT ++G+ + QI + DTPGL +
Sbjct: 23 VAVIGAPNAGKSTLVNALVGQKVAIVSSKAQTTRARLMGIALEGPAQIILVDTPGLFEPR 82
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW + +++V D + ++ + K+ P ++R+
Sbjct: 83 RRLD----RAMVHAAWEGAEAADAIVLVVDARKKKRDYLEGILATL----KERP--ERRI 132
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGL 303
L +NKVD T K+ LL A++ G++ +F S L G G+
Sbjct: 133 LVLNKVD-STAKEPLLVAAQELAAAGGFDEVFFVSALTGDGV 173
>gi|40063137|gb|AAR37984.1| GTP-binding protein Era [uncultured marine bacterium 561]
Length = 300
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 12/176 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+Q+ IIG PN GKS+++NY +G K++ SRK TT H+V+G+ T + Q+ DTP
Sbjct: 5 EQRCGYAAIIGRPNVGKSTLLNYALGQKISITSRKPQTTRHQVMGIYTDSGDQVVFVDTP 64
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRH-LTSPDSRVIRLIERMGKQA 254
G+ L + ++ + SA + V+L V+F V R+ TS D V+ ++ +
Sbjct: 65 GMHLEQGKAINRYMNRAASSALADVDL-----VLFVVDRNRWTSEDDLVLEALQH--TET 117
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P L +NK+D + + LL E + G++ IF S L+ A L AL Y+
Sbjct: 118 PV----ALVINKIDRLEDQAVLLPWTESIRAKYGFDAIFPISALRQANLPALMTYI 169
>gi|347758994|ref|YP_004866556.1| GTP-binding protein Era [Micavibrio aeruginosavorus ARL-13]
gi|347591512|gb|AEP10554.1| GTP-binding protein Era [Micavibrio aeruginosavorus ARL-13]
Length = 307
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 94/173 (54%), Gaps = 9/173 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKAD--TQICIFDTPGLML 199
V IIGAPNAGKS++IN MVG KV+ V+RK TT V G++ D TQI + DTPG+
Sbjct: 8 VAIIGAPNAGKSTLINRMVGAKVSIVNRKVQTTRINVRGIVMMDDDATQIILIDTPGIFS 67
Query: 200 NKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVI--RLIERMGKQAPPK 257
K + V +AW+ ++ ++ D + D+R + + +R+ A
Sbjct: 68 PKRRLD----RAMVAAAWNGEADADITALLIDASKEGFDKDTRALLDTIEKRVKDGAVGD 123
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+K +L +NK+D + + LLK++ + + FM SGLKG G++ + ++
Sbjct: 124 RKIILLLNKIDQMPADQ-LLKISAELNDRIPFTATFMISGLKGRGVQDVLDWI 175
>gi|255263213|ref|ZP_05342555.1| GTP-binding protein Era [Thalassiobium sp. R2A62]
gi|255105548|gb|EET48222.1| GTP-binding protein Era [Thalassiobium sp. R2A62]
Length = 307
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 9/169 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ +IG PNAGKS+++N MVG KV+ V+ K TT + GV + +Q+ DTPGL +
Sbjct: 13 IALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGQSQLVFVDTPGLFKPR 72
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +V++++ + HR +T ++ +E G AP
Sbjct: 73 RRLD----RAMVAAAWSGASDADVVVLMIESHRGITEGVEAILEALEERGGNAPV----A 124
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V K + LL + ++ + FM S KG G+ L +L
Sbjct: 125 LALNKIDRV-KSEVLLGLTKEMNDRFDFAETFMISAEKGHGVDTLRTWL 172
>gi|395781936|ref|ZP_10462346.1| GTPase Era [Bartonella rattimassiliensis 15908]
gi|395420378|gb|EJF86659.1| GTPase Era [Bartonella rattimassiliensis 15908]
Length = 299
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 92/174 (52%), Gaps = 13/174 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V IG PNAGKS+++N +VGTK++ V+ K TT + G++ + QI + DTPG+
Sbjct: 8 RSGFVVFIGMPNAGKSTLVNQLVGTKISIVTHKVQTTRTLIRGIVIHDNVQIVLVDTPGV 67
Query: 198 MLNKSGYSHKDVKV-RVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
HK ++ V +AW +VL+V+ D L+ ++ +++ M
Sbjct: 68 F-----RPHKRLECAMVSAAWGGTKRADVLLVLIDAQSGLSDEVYMMLDIVKNM------ 116
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
KQ+++L +NK+D + K LL + + + + FM S L G+G K L L
Sbjct: 117 KQEKILVLNKIDTIVKSS-LLALTTKVNERVEFAQTFMISALNGSGCKDLLHAL 169
>gi|83644633|ref|YP_433068.1| GTP-binding protein Era [Hahella chejuensis KCTC 2396]
gi|83632676|gb|ABC28643.1| GTP-binding protein Era [Hahella chejuensis KCTC 2396]
Length = 304
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 98/182 (53%), Gaps = 12/182 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
+E+ + V I+G PN GKS+++N+++G K++ S+K TT H++LG+ T+ D Q D
Sbjct: 8 QENSRCGYVAIVGRPNVGKSTLLNHILGQKISITSKKPQTTRHQILGIKTEGDYQAIYVD 67
Query: 194 TPGL-MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGK 252
TPGL L+K + +V +++ SA+ +V++ V D + T D V + K
Sbjct: 68 TPGLHQLDKKALN----RVLNKASSSAIKDADVIVFVVD-RKRWTEEDDYV------LSK 116
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
A + R+L +NKVD + K DLL ++ + + ++ I S L+G + L + E
Sbjct: 117 IAKVNRPRILVINKVDKLENKDDLLPFIDKVQKMCEFQHIIPLSALRGLNIDRLEAVINE 176
Query: 313 QF 314
Sbjct: 177 ML 178
>gi|319784503|ref|YP_004143979.1| GTP-binding protein Era [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317170391|gb|ADV13929.1| GTP-binding protein Era [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 308
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 90/173 (52%), Gaps = 11/173 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPNAGKS+++N +VG KV+ V+ K TT V G+ T + QI DTPG+ K
Sbjct: 19 VALIGAPNAGKSTLVNQLVGAKVSIVTHKVQTTRAIVRGIATHDNAQIVFVDTPGIFKPK 78
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
V +AW ++++++ D R + D+ I +ER+ +Q V
Sbjct: 79 RRLD----TAMVTTAWGGAKDADIVLLLIDAERGIRG-DADAI--LERLKDV---RQPMV 128
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NKVD V + L A + +P ++R FM S L G+G K + YL E
Sbjct: 129 LILNKVDRVKHEALLALSAAANERVP-FKRTFMVSALTGSGCKDVLDYLAESL 180
>gi|339017984|ref|ZP_08644128.1| GTP-binding protein Era [Acetobacter tropicalis NBRC 101654]
gi|338752873|dbj|GAA07432.1| GTP-binding protein Era [Acetobacter tropicalis NBRC 101654]
Length = 299
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 89/172 (51%), Gaps = 11/172 (6%)
Query: 143 GIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKS 202
++GAPNAGKS+++N M G K++ VS K TT VLG++ + TQI + DTPG+ +
Sbjct: 11 ALVGAPNAGKSTLLNRMTGAKLSIVSPKAQTTRFRVLGILMREHTQILLVDTPGIFRPR- 69
Query: 203 GYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVL 262
K + V +AW+ + ++ +++ D LT V +I+R+ K +K L
Sbjct: 70 ---RKLDRAMVAAAWTGSDDADITLLLVDAKSGLTEA---VAEIIDRLAKAG---RKIWL 120
Query: 263 CMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
+NK DLVT + LL + E +FM S G+G+ L L E
Sbjct: 121 VLNKTDLVTPEV-LLPLTAAITEKLTVEHVFMVSARSGSGVADLLDRLAENL 171
>gi|349700037|ref|ZP_08901666.1| GTPase Era [Gluconacetobacter europaeus LMG 18494]
Length = 304
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 90/170 (52%), Gaps = 13/170 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+GAPNAGKS+++N M GTK++ VS K TT VLG++ + TQI + DTPG+ +
Sbjct: 15 VAIVGAPNAGKSTLLNRMAGTKLSIVSPKAQTTRFRVLGILMRDRTQILLVDTPGIFQPR 74
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIE-RMGKQAPPKQKR 260
K + V +AW+ ++ +++ D +T +R I R+ +Q K++
Sbjct: 75 ----RKLDRAMVAAAWTGSEDADITLLIVDARAGMTD----ALRAIATRLAEQ---KRRL 123
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK DLV + L AE LP E +FM S G G+ L L
Sbjct: 124 WLVLNKTDLVRRDALLPLTAELSAILP-VEHVFMVSARSGEGVDDLLDRL 172
>gi|119503989|ref|ZP_01626070.1| GTP-binding protein Era [marine gamma proteobacterium HTCC2080]
gi|119459992|gb|EAW41086.1| GTP-binding protein Era [marine gamma proteobacterium HTCC2080]
Length = 300
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 12/176 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+Q+ IIG PN GKS+++NY +G K++ SRK TT H+V+G+ T + Q+ DTP
Sbjct: 5 EQRCGYAAIIGRPNVGKSTLLNYALGQKISITSRKPQTTRHQVMGIYTDSGDQVVFVDTP 64
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRH-LTSPDSRVIRLIERMGKQA 254
G+ L + ++ + SA + V+L V+F V R+ TS D V+ ++ +
Sbjct: 65 GMHLEQGKAINRYMNRAASSALADVDL-----VLFVVDRNRWTSEDDLVLEALQH--TET 117
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P L +NK+D + + LL E + G++ IF S L+ A L AL Y+
Sbjct: 118 PV----ALVINKIDRLEDQGVLLPWTESIRAKYGFDAIFPISALRQANLPALMTYI 169
>gi|27380171|ref|NP_771700.1| GTP-binding protein Era [Bradyrhizobium japonicum USDA 110]
gi|30178619|sp|O69162.3|ERA_BRAJA RecName: Full=GTPase Era
gi|27353325|dbj|BAC50325.1| GTP-binding protein Era [Bradyrhizobium japonicum USDA 110]
Length = 308
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 11/171 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG KV VSRK TT + G++ + + QI + DTPG+ K
Sbjct: 18 VALIGAPNVGKSTLVNALVGAKVTIVSRKVQTTRALIRGIVIENNAQIILVDTPGIFSPK 77
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D + + + K A ++
Sbjct: 78 RRLD----RAMVSTAWSGAHDADLVCVLLDAKTGIDEEAEAI------LAKAASVNHDKI 127
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L +NKVDLV ++K LL +A+ + + FM + + G G+ L L E
Sbjct: 128 LVINKVDLVQREK-LLALAQAANERMPFAKTFMIAAISGDGVDDLRSTLAE 177
>gi|334142356|ref|YP_004535564.1| GTP-binding protein Era [Novosphingobium sp. PP1Y]
gi|333940388|emb|CCA93746.1| GTP-binding protein Era [Novosphingobium sp. PP1Y]
Length = 297
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 17/177 (9%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
+K V +IGAPNAGKS+++N +VG KVA S K TT ++G+ + + QI + DTPG
Sbjct: 3 EKCGLVAVIGAPNAGKSTLVNALVGQKVAITSAKAQTTRARLMGIALQDEVQIILADTPG 62
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDV---HRHLTSPDSRVIRLIERMGKQ 253
+ K + V +AW + +++V D RH +P L+E + K
Sbjct: 63 IFAPKRRLD----RAMVAAAWEGAQEADAILLVVDAVKQRRHELAP------LLETL-KD 111
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P ++++L +NKVD + K+ LLK+AE+ ++ ++ S L G+ L +L
Sbjct: 112 RP--ERKLLVLNKVD-ASAKEPLLKLAEELTGAVSFDEVYFVSALTNDGVPELKTHL 165
>gi|359401285|ref|ZP_09194255.1| GTP-binding protein Era [Novosphingobium pentaromativorans US6-1]
gi|357597356|gb|EHJ59104.1| GTP-binding protein Era [Novosphingobium pentaromativorans US6-1]
Length = 297
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 17/177 (9%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
+K V +IGAPNAGKS+++N +VG KVA S K TT ++G+ + + QI + DTPG
Sbjct: 3 EKCGLVAVIGAPNAGKSTLVNALVGQKVAITSAKAQTTRARLMGIALQNEVQIILADTPG 62
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDV---HRHLTSPDSRVIRLIERMGKQ 253
+ K + V +AW + +++V D RH +P L+E + K
Sbjct: 63 IFAPKRRLD----RAMVAAAWEGAQEADAILLVVDAVKQRRHELAP------LLETL-KD 111
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P ++++L +NKVD + K+ LLK+AE+ ++ ++ S L G+ L +L
Sbjct: 112 RP--ERKLLVLNKVD-ASAKEPLLKLAEELTGAVSFDEVYFVSALTNDGVPELKTHL 165
>gi|304403961|ref|ZP_07385623.1| GTP-binding protein Era [Paenibacillus curdlanolyticus YK9]
gi|304346939|gb|EFM12771.1| GTP-binding protein Era [Paenibacillus curdlanolyticus YK9]
Length = 306
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 94/169 (55%), Gaps = 10/169 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N+++G K+A +S K TT +++ GV TK D QI DTPG+ +
Sbjct: 17 VAIVGRPNVGKSTLMNHIIGQKIAIMSDKPQTTRNKIHGVYTKDDKQIVFLDTPGIHKPQ 76
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S + V+SA +A++ E + + DV + D +I ++ + K P
Sbjct: 77 SKLGN----FMVKSAVNALDEVEAALFLIDVSEGIGGGDRFIIEQLKNV-KNTPV----F 127
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L MNK+D V K ++LLK+ Q+K L + I S L+G ++ L + L
Sbjct: 128 LVMNKIDKV-KPEELLKIITQYKDLYDFAEIIPISALQGNNVETLLEQL 175
>gi|408379295|ref|ZP_11176889.1| GTPase Era [Agrobacterium albertimagni AOL15]
gi|407746779|gb|EKF58301.1| GTPase Era [Agrobacterium albertimagni AOL15]
Length = 313
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG NAGKS+++N VG KV+ VS K TT + G+ + QI DTPG+
Sbjct: 19 RSGFVALIGPTNAGKSTLVNRFVGAKVSIVSHKVQTTRAVMRGIAIHKNAQIVFMDTPGI 78
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ K + V SAW ++++++ D R L ++ + K P
Sbjct: 79 FKPR----RKLDRAMVTSAWGGAKDADIILLLIDSERGLRGDAEAILEAL----KDVP-- 128
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
Q ++L +NK+D V + +DL ++A + ++R FM S G+G + YL E F
Sbjct: 129 QPKILVLNKIDRV-RHEDLFELAAKANETVKFDRTFMISATTGSGCDDIMDYLAETF 184
>gi|91977123|ref|YP_569782.1| GTP-binding protein Era [Rhodopseudomonas palustris BisB5]
gi|91683579|gb|ABE39881.1| GTP-binding protein Era [Rhodopseudomonas palustris BisB5]
Length = 307
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VSRK TT + G++ + +QI + DTPG+ K
Sbjct: 17 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEGGSQIVLVDTPGIFAPK 76
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V++AW+ + +++ V+ D L + G A +V
Sbjct: 77 RRLD----RAMVKTAWTGAHDADLVCVLLDARSGLDEEAETI------FGNLANVGHPKV 126
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+DLV ++K LL + + ++ FM S L G G+ L + L
Sbjct: 127 LVINKIDLVPREK-LLALTQTANQRLHFDETFMVSALSGDGVDDLRRGL 174
>gi|433776106|ref|YP_007306573.1| GTP-binding protein Era [Mesorhizobium australicum WSM2073]
gi|433668121|gb|AGB47197.1| GTP-binding protein Era [Mesorhizobium australicum WSM2073]
Length = 306
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 90/173 (52%), Gaps = 11/173 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPNAGKS+++N +VG KV+ V+ K TT V G+ T + QI DTPG+ K
Sbjct: 17 VALIGAPNAGKSTLVNQLVGAKVSIVTHKVQTTRAIVRGIATHDNAQIVFVDTPGIFKPK 76
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
V +AW ++++++ D R + D+ I +ER+ +Q V
Sbjct: 77 RRLD----TAMVTTAWGGAKDADIVLLLIDAERGIRG-DADAI--LERLKDV---RQPMV 126
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NKVD V + L A + +P ++R FM S L G+G K L YL +
Sbjct: 127 LILNKVDRVKHEALLALSAAANEKVP-FQRTFMVSALTGSGCKDLLDYLAQAL 178
>gi|6655023|gb|AAD02940.2| GTP-binding protein Era [Bradyrhizobium japonicum]
Length = 309
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 11/171 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG KV VSRK TT + G++ + + QI + DTPG+ K
Sbjct: 18 VALIGAPNVGKSTLVNALVGAKVTIVSRKVQTTRALIRGIVIENNAQIILVDTPGIFSPK 77
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D + + + K A ++
Sbjct: 78 RRLD----RAMVSTAWSGAHDADLVCVLLDAKTGIDEEAEAI------LAKAASVNHDKI 127
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L +NKVDLV ++K LL +A+ + + FM + + G G+ L L E
Sbjct: 128 LVINKVDLVQREK-LLALAQAANERMPFAKTFMIAAISGDGVDDLRSTLAE 177
>gi|86749731|ref|YP_486227.1| GTP-binding protein Era [Rhodopseudomonas palustris HaA2]
gi|86572759|gb|ABD07316.1| GTP-binding protein [Rhodopseudomonas palustris HaA2]
Length = 307
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VSRK TT + G++ ++ +QI + DTPG+ K
Sbjct: 17 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIESGSQIVLVDTPGIFAPK 76
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW+ + + + V+ D + + +E +G +V
Sbjct: 77 RRLD----RAMVRTAWTGAHDADAVCVLLDARAGIDEQAETIFGNLENVG------HPKV 126
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+DLV ++K LL + + ++ FM S L G G+ L + L
Sbjct: 127 LVLNKIDLVPREK-LLALTQAANERLRFDETFMVSALSGDGVDDLRRGL 174
>gi|398382918|ref|ZP_10540995.1| GTP-binding protein Era [Sphingobium sp. AP49]
gi|397725628|gb|EJK86076.1| GTP-binding protein Era [Sphingobium sp. AP49]
Length = 302
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 11/172 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+Q+ + I+GAPNAGKS+++N +VG KVA S K TT V+GV + + Q+ + DT
Sbjct: 6 ENQRCGVIAIVGAPNAGKSTLVNALVGQKVAITSPKAQTTRTRVMGVAIEGNAQMVLVDT 65
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ K + V++AW +++++V D L S +I + A
Sbjct: 66 PGIFAPKRRLD----RAMVQAAWGGAQGADLIVLVVDGKAGLGSKMEPIIAAL------A 115
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
+K+ L +NKVD+ K+K L+ ++ L E F S G GL L
Sbjct: 116 ARPEKKWLVLNKVDIAIKEKLLVHTQRLYEQLE-IEETFFVSAATGDGLAEL 166
>gi|337286350|ref|YP_004625823.1| GTP-binding protein Era [Thermodesulfatator indicus DSM 15286]
gi|335359178|gb|AEH44859.1| GTP-binding protein Era [Thermodesulfatator indicus DSM 15286]
Length = 306
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 101/186 (54%), Gaps = 12/186 (6%)
Query: 128 EEEEVKEEDQ-KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKAD 186
E + K E++ +S V +IG PN GKS+++N ++G KVA + K TT + GV+T +
Sbjct: 2 ENSQAKNENKFRSGYVALIGLPNVGKSTLLNQLLGYKVAIATPKPQTTRFPIRGVLTGEN 61
Query: 187 TQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRL 246
QI DTPG+ K ++ K+ VE A A+ + ++ + DV + ++I +
Sbjct: 62 FQIIFVDTPGIHDAKDLFN----KIMVEQALKAIEEVDSIVFIIDVSNRNPKAEEKIIDI 117
Query: 247 IERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
+ + K A +L +NK+DLV KK +LL + + F + ++ I S L+ GL+ L
Sbjct: 118 LRKANKPA------ILALNKIDLV-KKGELLPIIDYFSQIYPFKAIVPISALERDGLEEL 170
Query: 307 TQYLME 312
+ ++E
Sbjct: 171 VKEIVE 176
>gi|312115947|ref|YP_004013543.1| GTP-binding protein Era [Rhodomicrobium vannielii ATCC 17100]
gi|311221076|gb|ADP72444.1| GTP-binding protein Era [Rhodomicrobium vannielii ATCC 17100]
Length = 364
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 11/168 (6%)
Query: 143 GIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKS 202
+IGAPNAGKS+++N +VG KV+ V+ K TT V G+ + QI + DTPG+ K
Sbjct: 75 AVIGAPNAGKSTLVNALVGAKVSIVTHKAQTTRTRVRGIALDGEAQIVLVDTPGIFAPKR 134
Query: 203 GYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVL 262
+ VE+AW+ +V ++V D R D V ++ P +L
Sbjct: 135 RLD----RAMVETAWTEAREADVAVLVVDAARGF---DDTVDPIVNEAANLKIP---LIL 184
Query: 263 CMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+NKVD + K+K LL +A + E +FM S L G G++ L +L
Sbjct: 185 ALNKVDKIHKEK-LLALAGEASERLKLESLFMISALSGDGVEDLRGFL 231
>gi|222148082|ref|YP_002549039.1| GTP-binding protein Era [Agrobacterium vitis S4]
gi|221735070|gb|ACM36033.1| GTP-binding protein Era [Agrobacterium vitis S4]
Length = 327
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 87/171 (50%), Gaps = 11/171 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N VG KV+ VS K TT + G+ + QI DTPG+ +
Sbjct: 37 VALIGPTNAGKSTLVNRFVGAKVSIVSHKVQTTRAVMRGIAIHNNAQIVFMDTPGIFKPR 96
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
K + V SAW +V++++ D R L ++ ++ + Q ++
Sbjct: 97 ----RKLDRAMVTSAWGGAKDADVILLLIDSERGLRGDGEAILEALKDV------HQPKI 146
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L +NK+D V + +DLLK+A +ER FM S G+G + + YL +
Sbjct: 147 LVLNKIDQV-RHEDLLKLASTANEAVKFERTFMISATNGSGCQDVMDYLAD 196
>gi|341615119|ref|ZP_08701988.1| GTPase Era [Citromicrobium sp. JLT1363]
Length = 314
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 96/184 (52%), Gaps = 21/184 (11%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMT----KADTQI 189
E+ QK V ++GAPNAGKS+++N +VG KVA VS K TT +LG+ +A TQ+
Sbjct: 13 EKKQKCGVVAVLGAPNAGKSTLVNALVGQKVAIVSAKAQTTRARMLGIALHESDEASTQM 72
Query: 190 CIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFD---VHRHLTSPDSRVIRL 246
+ DTPG+ + + V +AW + ++++ D RH P L
Sbjct: 73 ILVDTPGIFAPRRRLD----RAMVSAAWEGAESADAVLLLVDPVKQRRHELEP------L 122
Query: 247 IERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
+E++ A +K++L +NKVD V +K+ LL +A++ + I+ S L G G+ L
Sbjct: 123 LEQL---AGRPEKKILVLNKVD-VARKEPLLALAQELSGKVEFAEIYFISALTGDGVPEL 178
Query: 307 TQYL 310
L
Sbjct: 179 KDAL 182
>gi|414173888|ref|ZP_11428515.1| GTPase Era [Afipia broomeae ATCC 49717]
gi|410890522|gb|EKS38321.1| GTPase Era [Afipia broomeae ATCC 49717]
Length = 308
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 90/169 (53%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VS+K TT + G++ + + QI + DTPG+ K
Sbjct: 18 VALIGAPNVGKSTLVNALVGSKVTIVSKKVQTTRALIRGIVIEDNAQIILVDTPGIFAPK 77
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ + D + ++ +E + +V
Sbjct: 78 RRLD----RAMVSTAWSGAHDADLVCALIDARAGIDDEADAILSKLESV------NHPKV 127
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+DLV ++K LL +A++ + + FM S L G G+ L + L
Sbjct: 128 LVLNKIDLVPREK-LLALAQKANERLKFTQTFMVSALSGDGVDDLRRAL 175
>gi|40063417|gb|AAR38228.1| GTP-binding protein Era [uncultured marine bacterium 580]
Length = 297
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 141 AVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLN 200
+ I+G PN GKS+++NY VG+K++ SRK TT ++++G+ T DTQ DTPG L
Sbjct: 12 TIAIVGQPNVGKSTLLNYFVGSKLSITSRKAQTTRYQLVGIFTDKDTQYIFVDTPGYQLK 71
Query: 201 KSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKR 260
+K + V A V+ L++ L + D +++++I P
Sbjct: 72 HLNQMNKSLNKSVNQALKDVD----LILFLSEPNELDATDKKILQMI-------PNSTPI 120
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTS 296
+L +NK+DL+ K +L + + HL +E I TS
Sbjct: 121 LLIINKIDLIKDKSKILALMSEADHLDKFEEIVPTS 156
>gi|338974856|ref|ZP_08630212.1| GTP-binding protein Era [Bradyrhizobiaceae bacterium SG-6C]
gi|338231951|gb|EGP07085.1| GTP-binding protein Era [Bradyrhizobiaceae bacterium SG-6C]
Length = 308
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 97/184 (52%), Gaps = 11/184 (5%)
Query: 127 EEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKAD 186
+E+ E ++ + V +IGAPN GKS+++N +VG+KV VS+K TT + G++ + +
Sbjct: 3 DEQHENSAKETRCGFVALIGAPNVGKSTLVNALVGSKVTIVSKKVQTTRALIRGIVIEDN 62
Query: 187 TQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRL 246
QI + DTPG+ K + V +AWS + +++ + D + ++R
Sbjct: 63 AQIILVDTPGIFAPKRRLD----RAMVSTAWSGAHDADLVCALIDARAGIDEEADAILRK 118
Query: 247 IERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
+E + ++L +NK+DLV ++K LL +A++ + + FM S L G+ L
Sbjct: 119 LEAV------NHPKILVLNKIDLVPREK-LLALAQKANERLTFTQTFMVSALSCDGVDDL 171
Query: 307 TQYL 310
+ L
Sbjct: 172 RRAL 175
>gi|47223730|emb|CAF98500.1| unnamed protein product [Tetraodon nigroviridis]
Length = 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 80/145 (55%), Gaps = 7/145 (4%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
K + V +IGAPNAGKS++ N ++G KV AVSRK +TT + LGV+T+ DTQI + DTPGL
Sbjct: 17 KVLKVAVIGAPNAGKSTLSNQLLGRKVFAVSRKVHTTRNRALGVLTEGDTQIILLDTPGL 76
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSP--DSRVIRLIERMGKQAP 255
H+ K + W+ V ++++V+ DV D V++ + +
Sbjct: 77 TTVSKVKRHQLEKSLLVDPWNTVKEADLMVVMVDVSDRWMCGRLDMEVLKCLSQH----- 131
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVA 280
P +L +NKVD V K LL +
Sbjct: 132 PDTPAILVLNKVDKVKAKDRLLDIT 156
>gi|383316369|ref|YP_005377211.1| GTP-binding protein Era [Frateuria aurantia DSM 6220]
gi|379043473|gb|AFC85529.1| GTP-binding protein Era [Frateuria aurantia DSM 6220]
Length = 309
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 10/177 (5%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
E+ E D + V + G PN GKS+++N ++G +++ VS + TT H +LG+ + D QI
Sbjct: 10 ELPESDFRCGTVALAGRPNVGKSTLLNALIGVRLSIVSPRPQTTRHRILGIASSDDAQIL 69
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM 250
DTPG L+K G + + A SA++ +VL+ V + R T D + + +E
Sbjct: 70 YVDTPG--LHKGGKRAMNRSIN-RVARSAISEVDVLVQVIEAGR-WTEEDQGLYQAME-- 123
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALT 307
G+ AP R+L +NKVDL K LL + Y ++ S LK GLK L
Sbjct: 124 GQDAP----RLLVVNKVDLAKDKTILLPFMSKLLEEHSYAEVYYVSALKNKGLKELV 176
>gi|87199823|ref|YP_497080.1| GTP-binding protein Era [Novosphingobium aromaticivorans DSM 12444]
gi|87135504|gb|ABD26246.1| GTP-binding protein Era [Novosphingobium aromaticivorans DSM 12444]
Length = 297
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 17/179 (9%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
+K V ++GAPNAGKS+++N +VG KVA VS K TT ++G+ + + QI + DTPG
Sbjct: 3 EKCGLVAVLGAPNAGKSTLVNALVGQKVAIVSAKAQTTRARLMGIALEGEAQIILADTPG 62
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH---RHLTSPDSRVIRLIERMGKQ 253
L + + V +AW + +++V D R P +R ER
Sbjct: 63 LFEPRRRLD----RAMVSAAWDGAQEADAILLVVDARKKKRDYLEPILASLR--ER---- 112
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
++++L +NKVD T K+ LL +AE ++ +F S L G G+ L + L E
Sbjct: 113 ---PERKILVLNKVD-STPKEPLLVMAEALTGEAAFDEVFFVSALTGDGVPELKRRLAE 167
>gi|350554123|ref|ZP_08923259.1| GTP-binding protein Era-like-protein [Thiorhodospira sibirica ATCC
700588]
gi|349788809|gb|EGZ42801.1| GTP-binding protein Era-like-protein [Thiorhodospira sibirica ATCC
700588]
Length = 297
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 95/170 (55%), Gaps = 11/170 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF-DTPGLMLN 200
+ IIG PN GKS+++N VG K+AA SRK TT H +LG++T+ + IF DTPG+ L
Sbjct: 13 IAIIGRPNVGKSTLLNGFVGEKIAAASRKPQTTRHTILGIVTRPNHDQLIFVDTPGIDL- 71
Query: 201 KSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKR 260
G H+ +V +A + +N +V+++V + R D +++ + +G + P
Sbjct: 72 --GNRHRLGQVLNRTAQATLNDVDVILLVVEAGR-FDDADQHILQ--QAIGSRRPI---- 122
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+L +NKVD ++ K+ LL E+ + I SGLKG L+ + + L
Sbjct: 123 LLAINKVDRISDKRTLLPYIERLSQRHEFADIVPLSGLKGINLEPVLEAL 172
>gi|163793043|ref|ZP_02187019.1| GTP-binding protein Era [alpha proteobacterium BAL199]
gi|159181689|gb|EDP66201.1| GTP-binding protein Era [alpha proteobacterium BAL199]
Length = 308
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 96/173 (55%), Gaps = 10/173 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++GAPNAGKS++ N +VG KV+ V+ K TT + G++ TQ+ + DTPG+ +
Sbjct: 18 VALVGAPNAGKSTLTNSLVGAKVSIVTHKAQTTRSRIRGIVMAGATQLILVDTPGIFKPR 77
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW+ +++++V D R D++ R+I+ + Q+ V
Sbjct: 78 RRLD----RAMVHAAWAGAGDADIIVLVADAARGRIEEDTQ--RIIDGLKANG---QRAV 128
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NKVD + K++ LL +A+ + ++ +FM S L G G LT+YL E+
Sbjct: 129 LALNKVDGM-KRERLLPIAQAYSEAFDFDSVFMISALTGNGCDDLTRYLAERM 180
>gi|291613750|ref|YP_003523907.1| GTP-binding protein Era [Sideroxydans lithotrophicus ES-1]
gi|291583862|gb|ADE11520.1| GTP-binding protein Era [Sideroxydans lithotrophicus ES-1]
Length = 297
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 87/169 (51%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++N+++G K++ SRK TT H + G++T+ADTQ DTPG
Sbjct: 12 IAIVGRPNVGKSTLLNHLIGQKISITSRKAQTTRHRITGILTEADTQFVFVDTPGFQTQH 71
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ ++ + V ++ VN V++ V + R D +V+ L+ P + +
Sbjct: 72 TNALNRGMNRVVTNSLREVN---VVLFVLEA-RQFDERDQQVMGLL-------PQDRPVI 120
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK DL+ K +LL E+ L + I S +G L L + +
Sbjct: 121 LVINKADLLADKSELLPFIEKISALRHFAAIVPVSARQGKQLDTLLEAI 169
>gi|317486347|ref|ZP_07945177.1| GTP-binding protein Era [Bilophila wadsworthia 3_1_6]
gi|345888095|ref|ZP_08839214.1| GTP-binding protein Era [Bilophila sp. 4_1_30]
gi|316922417|gb|EFV43673.1| GTP-binding protein Era [Bilophila wadsworthia 3_1_6]
gi|345041099|gb|EGW45295.1| GTP-binding protein Era [Bilophila sp. 4_1_30]
Length = 311
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 6/172 (3%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++G PNAGKS++ N +VG KVA V+ K TT + ++G++T+ D Q+ DTPG+ +
Sbjct: 10 VALMGPPNAGKSTLTNALVGQKVAIVTAKPQTTRNRIVGILTQKDAQVIFMDTPGVHALR 69
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPD---SRVIRLIERMGKQAPPKQ 258
+ K+ V+SAW + + +++V D +L PD + LI+ + ++ P
Sbjct: 70 GQTRGQLGKIMVQSAWQSFAVANCIVLVIDGDLYLRKPDFMERDLAPLIQPLAEEERPVV 129
Query: 259 KRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+NKVDL K +L + E + IF S L+ G++ L + +
Sbjct: 130 VV---VNKVDLFHDKSRMLPLLESVAQMFPKAEIFPASALRRNGVEQLLELI 178
>gi|350398966|ref|XP_003485366.1| PREDICTED: GTPase Era, mitochondrial-like [Bombus impatiens]
Length = 351
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 119 QAALERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEV 178
Q AL + + +K K V V I+G PN GKS+++N ++ + S K +TT H+
Sbjct: 41 QTALNNASDLYQGIK----KLVKVAILGLPNVGKSTLVNKLINRCICPTSSKVHTTMHKA 96
Query: 179 LGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLT- 237
+ T+ DTQI DTPGL+++K ++K + +A+ +++ +V DV T
Sbjct: 97 EAIYTEGDTQIVFMDTPGLVVSKDIKTYKLSDSFKDDPKTALIEADIIGIVQDVTNVFTR 156
Query: 238 -SPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQF---KHLPGYERIF 293
D V+ I K+ + ++ +NKVD + +K LL+V Q ++ P ++ IF
Sbjct: 157 HKIDDFVLNYI----KEKREDTQLLIILNKVDRLKEKMALLEVTRQLINKENYPKFDDIF 212
Query: 294 MTSGLKGAGLKALTQYLME 312
M S L G G+ L YL++
Sbjct: 213 MISALNGDGVDDLRNYLLD 231
>gi|354594332|ref|ZP_09012371.1| GTP-binding protein Era [Commensalibacter intestini A911]
gi|353672008|gb|EHD13708.1| GTP-binding protein Era [Commensalibacter intestini A911]
Length = 293
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 92/174 (52%), Gaps = 13/174 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPNAGKS+++N M G K++ VS K TT +LG++ + TQI + DTPG+ K
Sbjct: 6 VALIGAPNAGKSTLLNKMAGAKLSIVSPKAQTTRMRILGIVMRQQTQILLMDTPGIFKPK 65
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
K + V +AW+ ++ +++ D + LT + +I ++ +R+
Sbjct: 66 ----RKLDEAMVAAAWTGAVDADITLLLIDANLGLTDENRDIINHLKE-------NSRRI 114
Query: 262 -LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L NK+D + +K LL + E+ + E+ FM S G+G+ L L E+
Sbjct: 115 WLVFNKIDKINPQK-LLPLTEEITSMLSIEKSFMVSAKTGSGVDDLLDSLAEEL 167
>gi|340712106|ref|XP_003394605.1| PREDICTED: GTPase Era, mitochondrial-like [Bombus terrestris]
Length = 350
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 101/191 (52%), Gaps = 23/191 (12%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
+K V V I+G PNAGKS+++N ++ V +S K +TT H+ + T+ DTQI DTPG
Sbjct: 55 KKLVKVAILGLPNAGKSTLVNKLINRSVCPMSSKVHTTMHKAEAIYTEGDTQIVFMDTPG 114
Query: 197 LMLNKSGYSHK-------DVKVRVESAWSAVNLFEVLMVVFDVHRHLT--SPDSRVIRLI 247
L+++K ++K D K+ + A +++ +V DV T D V+ I
Sbjct: 115 LVVSKEIKTYKLSDSFKDDPKIALIEA-------DIIGIVQDVTNIYTRHKIDDFVLNYI 167
Query: 248 ERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQF---KHLPGYERIFMTSGLKGAGLK 304
K+ + ++ +NKVD + KK+ LL+V ++ P ++ IFM S L G G+
Sbjct: 168 ----KEKREDSQLLMILNKVDKLKKKEALLEVTRLLTNKENYPKFDDIFMISALNGDGVD 223
Query: 305 ALTQYLMEQFK 315
L YL++ K
Sbjct: 224 DLRNYLLDSAK 234
>gi|170744646|ref|YP_001773301.1| GTP-binding protein Era [Methylobacterium sp. 4-46]
gi|168198920|gb|ACA20867.1| GTP-binding protein Era [Methylobacterium sp. 4-46]
Length = 315
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N +VG+KV+ VSRK TT V G+ + QI DTPG+ K
Sbjct: 25 VALIGVPNAGKSTLLNSLVGSKVSIVSRKVQTTRALVRGIAIEGAAQIVFVDTPGIFAPK 84
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ + V SAWS + + ++ D + + D V ++ R+ + PK +
Sbjct: 85 ----RRLDRAMVTSAWSGAADADAVCLLVDARKGV---DPEVEAVLGRLPELRRPK---I 134
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D++ +++ L A LP ++ FM S L G G+ L + L
Sbjct: 135 LVLNKIDVIARERLLDLAAALNGRLP-FDHTFMVSALTGDGVADLRRVL 182
>gi|291542200|emb|CBL15310.1| GTP-binding protein Era [Ruminococcus bromii L2-63]
Length = 305
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 10/176 (5%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS + I+G PN GKSSI+N ++G K+A VS K TT + + GV+T+ + Q+ FDTPG+
Sbjct: 9 KSAFIAIVGRPNVGKSSILNRLMGQKIAIVSSKPQTTRNRITGVLTQGEYQLVFFDTPGM 68
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ K V S +V + M+V + + P + LIE+ P
Sbjct: 69 HKPKTSLG----KYMVRSVNESVGGVDCCMLVVEAGKE---PGDTELNLIEKFKSMEMPA 121
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
+L +NK+D + +K++L+K ++ L ++ + S G G+ L L +Q
Sbjct: 122 ---ILAINKIDTLKEKEELMKQIARYSLLYDFDAVVPVSAQDGNGMNELLDELKKQ 174
>gi|190891074|ref|YP_001977616.1| GTP-binding protein Era [Rhizobium etli CIAT 652]
gi|417103287|ref|ZP_11961032.1| GTP-binding protein [Rhizobium etli CNPAF512]
gi|190696353|gb|ACE90438.1| GTP-binding protein [Rhizobium etli CIAT 652]
gi|327191323|gb|EGE58356.1| GTP-binding protein [Rhizobium etli CNPAF512]
Length = 313
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N +VG KV+ VS K TT V G+ + QI DTPG+ +
Sbjct: 24 VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAIVRGIAIHDNAQIVFMDTPGIFKPR 83
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW +++M++ D R L ++ ++ + +Q ++
Sbjct: 84 RRLD----RAMVTSAWGGAKDADLIMLLIDSERGLRGDAEAILEGLKEV------RQPKI 133
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V ++DLL +A +ER FM S G+G + YL
Sbjct: 134 LVLNKIDRVN-REDLLALAASANEKIAFERTFMISAENGSGCDDVMDYL 181
>gi|255087368|ref|XP_002505607.1| predicted protein [Micromonas sp. RCC299]
gi|226520877|gb|ACO66865.1| predicted protein [Micromonas sp. RCC299]
Length = 292
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 101/180 (56%), Gaps = 10/180 (5%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
+S V I+G PNAGKS+++N +VGTK++ V+ K TT H +LG++++ Q+ + DTPG
Sbjct: 1 HRSGYVAIVGRPNAGKSTLLNQLVGTKLSIVTFKPQTTRHRILGIVSEDHYQMVLLDTPG 60
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+M K ++ D ++ ++S +A+ +VL+ + D R + L E AP
Sbjct: 61 VM--KEEFNKLD-EMMLKSVRNAMANADVLLAIVDATRDPYGAFEGL--LPEHRANPAPL 115
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
+ +NK DL+ + ++ +V E F+ +PG ER+F S L G G A+ ++ + +
Sbjct: 116 G----VIINKCDLL-QVDEIREVKEYFEGIPGVERVFPVSALAGVGHDAVREWALTHLPE 170
>gi|303326575|ref|ZP_07357018.1| GTP-binding protein Era [Desulfovibrio sp. 3_1_syn3]
gi|345893758|ref|ZP_08844550.1| GTP-binding protein era [Desulfovibrio sp. 6_1_46AFAA]
gi|302864491|gb|EFL87422.1| GTP-binding protein Era [Desulfovibrio sp. 3_1_syn3]
gi|345045794|gb|EGW49693.1| GTP-binding protein era [Desulfovibrio sp. 6_1_46AFAA]
Length = 307
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 88/165 (53%), Gaps = 4/165 (2%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++G PNAGKS+++N ++G KV V+ K TT ++++G++T + Q+ DTPGL +
Sbjct: 11 VALMGPPNAGKSTLLNALLGQKVTIVTPKPQTTRNQIVGILTDEEAQVIFMDTPGLTQVR 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S K +++ W ++ +V+M + D H ++ P+ L A ++ +
Sbjct: 71 GRLS----KTMIQAVWQSLGQADVIMPILDSHLYIRHPEFLDRDLAPVAEALASDERPMI 126
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
+ +NKVDL + K +L + + + IF TS L+ GL L
Sbjct: 127 VVVNKVDLFSDKSRMLPLLTRLNEMWPRADIFPTSALRRDGLPEL 171
>gi|218887297|ref|YP_002436618.1| GTP-binding protein Era [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|226741205|sp|B8DQN1.1|ERA_DESVM RecName: Full=GTPase Era
gi|218758251|gb|ACL09150.1| GTP-binding protein Era [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 307
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 94/169 (55%), Gaps = 4/169 (2%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++G PNAGKS+++N +G KVA V+ + TT ++++G++++ D Q+ DTPG+ +
Sbjct: 11 VALLGPPNAGKSTLLNSALGHKVAIVTPRAQTTRNQIVGILSEPDAQVIFMDTPGIHQQR 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ K+ +++AW +++ +V++V+ D ++ PD + M A ++ +
Sbjct: 71 GRMN----KILLQTAWQSMHSADVILVMLDADLYIKKPDFLENDVKPLMDAVAAEERPVI 126
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ +NKVDL K +L + + + L +F S LK GL L + +
Sbjct: 127 VAVNKVDLFRDKSKMLPLFIELQKLWPKAEVFPVSALKRDGLPELVKLV 175
>gi|407695373|ref|YP_006820161.1| GTP-binding protein Era-like-protein [Alcanivorax dieselolei B5]
gi|407252711|gb|AFT69818.1| GTP-binding protein Era-like-protein [Alcanivorax dieselolei B5]
Length = 302
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 92/180 (51%), Gaps = 9/180 (5%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E ++ V IIG PN GKS+++N+++G KV+ SRK TT H + G++T+ D QI DT
Sbjct: 3 ESRRCGLVAIIGRPNVGKSTLMNHLIGQKVSITSRKPQTTRHRIHGILTRDDCQIVFADT 62
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ +G + E+A SA++ +V+ + D + D V+ L+ R G
Sbjct: 63 PGI---HTGQQRALNRAMNEAAMSALSDVDVICFMVDSDK-WNEGDEHVLSLLARAG-DI 117
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
P +L +NKVD + K +L + ++ + + S L G L L Q L+ +
Sbjct: 118 PV----ILVVNKVDRLDDKAAMLPLLDKLNQRHDFAEVIPVSALGGHNLDVLEQALVSRL 173
>gi|45383648|ref|NP_989570.1| GTPase Era, mitochondrial [Gallus gallus]
gi|82243559|sp|Q8JIF5.1|ERAL1_CHICK RecName: Full=GTPase Era, mitochondrial; Short=GdERA; AltName:
Full=ERA-like protein 1; Flags: Precursor
gi|22093559|dbj|BAC06859.1| E. coli Ras-like protein homologue [Gallus gallus]
Length = 461
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 82/150 (54%), Gaps = 7/150 (4%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ K + + IIGAPN+GKS++ N ++G KV VS+K +TT + GV+T DTQ+ I DTP
Sbjct: 87 EPKVLRISIIGAPNSGKSTLSNQLLGRKVFPVSKKVHTTRCKARGVITHEDTQLIILDTP 146
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLT--SPDSRVIRLIERMGKQ 253
GL HK + W ++ ++++V+ DV H T S V++ + +
Sbjct: 147 GLTSPMKAKRHKLEAAMLTDPWDSMKHADLVLVLVDVSDHWTRNSLSLEVLKCLSQF--- 203
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQF 283
P VL +NKVDL+ KK LL + +
Sbjct: 204 --PHIPSVLVLNKVDLLKKKIILLGLINEL 231
>gi|418936976|ref|ZP_13490650.1| GTP-binding protein Era-like-protein [Rhizobium sp. PDO1-076]
gi|375056318|gb|EHS52519.1| GTP-binding protein Era-like-protein [Rhizobium sp. PDO1-076]
Length = 323
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG NAGKS+++N VG KV+ VS K TT + G+ + QI DTPG+
Sbjct: 29 RSGFVALIGPTNAGKSTLVNRFVGAKVSIVSHKVQTTRAVMRGIAIHKNAQIVFMDTPGI 88
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ K + V SAW ++++++ D R L ++ + K P
Sbjct: 89 FKPR----RKLDRAMVTSAWGGAKDADLILLLIDSERGLRGDAEAILEAL----KDVP-- 138
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
Q ++L +NK+D V +++ LLK+A ++R FM S G+G + + YL + F
Sbjct: 139 QPKILVLNKIDRV-EREALLKLATTANETVKFDRTFMISATTGSGCEDIMDYLADTF 194
>gi|329114469|ref|ZP_08243231.1| GTP-binding protein Era-like protein [Acetobacter pomorum DM001]
gi|421848391|ref|ZP_16281379.1| GTP-binding protein Era [Acetobacter pasteurianus NBRC 101655]
gi|421852371|ref|ZP_16285060.1| GTP-binding protein Era [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|326696545|gb|EGE48224.1| GTP-binding protein Era-like protein [Acetobacter pomorum DM001]
gi|371460752|dbj|GAB26582.1| GTP-binding protein Era [Acetobacter pasteurianus NBRC 101655]
gi|371479451|dbj|GAB30263.1| GTP-binding protein Era [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 300
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 11/167 (6%)
Query: 144 IIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSG 203
++GAPNAGKS+++N M G K++ VS K TT VLG++ + +QI + DTPG+ +
Sbjct: 13 LVGAPNAGKSTLLNRMAGAKLSIVSPKAQTTRFRVLGILMRGHSQILLVDTPGIFRPR-- 70
Query: 204 YSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLC 263
K + V +AW+ ++ +++ D LT V +IER+ A K+K L
Sbjct: 71 --RKLDRAMVAAAWTGAEDADITLLLVDARSGLTEA---VQTIIERL---AETKRKVWLV 122
Query: 264 MNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+NK DLV L A + LP E +FM S G G++ L L
Sbjct: 123 LNKTDLVPATALLPLTASITEKLP-VEHVFMVSARTGNGVEDLLDKL 168
>gi|85708366|ref|ZP_01039432.1| GTPase [Erythrobacter sp. NAP1]
gi|85689900|gb|EAQ29903.1| GTPase [Erythrobacter sp. NAP1]
Length = 302
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPNAGKS+++N +VG KVA S K TT +LG+ Q+ + DTPG+ K
Sbjct: 13 VAVIGAPNAGKSTLVNQLVGQKVAITSAKAQTTRARMLGIALHGSVQMILVDTPGIFAPK 72
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFD---VHRHLTSPDSRVIRLIERMGKQAPPKQ 258
+ V +AW + ++++ D RH P +
Sbjct: 73 RRLD----RAMVSAAWEGAESADAVLLIVDPIKQRRHELEPLLE---------ALEQRSE 119
Query: 259 KRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
+++L +NKVD KK+ LL++A++ +E IF S L G G+ + + L EQ
Sbjct: 120 RKILVLNKVD-KAKKEPLLELAQEMSQRIDFEEIFFVSALSGDGVAEMKEALAEQM 174
>gi|146278604|ref|YP_001168763.1| GTP-binding protein Era [Rhodobacter sphaeroides ATCC 17025]
gi|145556845|gb|ABP71458.1| GTP-binding protein Era [Rhodobacter sphaeroides ATCC 17025]
Length = 304
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 8/169 (4%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N MVG KV+ V+ K TT + GV + +TQI DTPGL +
Sbjct: 10 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGETQIVFVDTPGLFRPR 69
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW +V++++ + HR LT + I+ M + P Q
Sbjct: 70 RRLD----RAMVAAAWGGAADADVIVLLVEAHRGLTEGTQAI---IDAMRDRIPQGQAVA 122
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V K + LL +A++ + FM S KG G+ L Q+L
Sbjct: 123 LAINKIDRV-KAEVLLGLAQELNAAFPFAETFMISAEKGYGVDKLRQWL 170
>gi|296115042|ref|ZP_06833684.1| GTP-binding protein Era [Gluconacetobacter hansenii ATCC 23769]
gi|295978379|gb|EFG85115.1| GTP-binding protein Era [Gluconacetobacter hansenii ATCC 23769]
Length = 302
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 13/166 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+GAPNAGKS+++N M GTK++ VS K TT VLG++ + Q+ + DTPG+ +
Sbjct: 14 VAIVGAPNAGKSTLLNRMAGTKLSIVSPKAQTTRFRVLGILMRNHAQMLLVDTPGIFRPR 73
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW+ ++ +++ D LT ++ Q + +RV
Sbjct: 74 RMLD----RAMVAAAWTGAEDADITLLIIDARAGLTEAVREIV-------SQLAQRNRRV 122
Query: 262 -LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
L +NK DL+ ++ LL + + L E +FM S G G+ L
Sbjct: 123 WLVLNKTDLM-RRDALLPLTAELSGLLTVEHVFMISARSGQGVDDL 167
>gi|333980011|ref|YP_004517956.1| GTP-binding protein Era [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823492|gb|AEG16155.1| GTP-binding protein Era-like-protein [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 300
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
+++E KS V IIG PN GKS+++N +VG KVA +S K TT H++ ++T+ D QI
Sbjct: 1 MEQEKFKSGFVAIIGRPNVGKSTLLNQLVGHKVAIMSDKPQTTRHKIHSIITRDDAQIIF 60
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMG 251
DTPG+ K HK + VE A A+ EV +++F V L P I I ++
Sbjct: 61 LDTPGIHKPK----HKLGEYMVEVALGALK--EVDVILFLVEPQLPGPGDEYI--IYQLR 112
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
+ P +L +NK+DL+ K +LL + + F+ + I S LK L L + ++
Sbjct: 113 EVTTPV---ILVINKIDLLENKAELLPLIDVFRQKYNFAEIIPVSTLKPENLDRLVELVV 169
>gi|372278588|ref|ZP_09514624.1| GTPase Era [Oceanicola sp. S124]
Length = 302
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ K+ V +IG PNAGKS++ N +VG KV+ V+ K TT + GV + D+QI + DTP
Sbjct: 2 NTKAGFVALIGEPNAGKSTLTNRIVGAKVSIVTHKVQTTRARIRGVAIEGDSQIVLVDTP 61
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
GL + + V +AW +V++++ + HR +T +++ G
Sbjct: 62 GLFKPRRRLD----RAMVAAAWGGAADADVIVLLIEAHRGITDGVGKILE-----GLAEL 112
Query: 256 PKQKRV-LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
PK +RV L +NK+D V + + LL + + +ER FM S KG G++ L ++L
Sbjct: 113 PKGRRVALAINKIDRV-EARVLLALTSEMNERYAFERTFMISAEKGHGVQDLREWL 167
>gi|220903650|ref|YP_002478962.1| GTP-binding protein Era [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254783652|sp|B8J3P9.1|ERA_DESDA RecName: Full=GTPase Era
gi|219867949|gb|ACL48284.1| GTP-binding protein Era [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 307
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 4/169 (2%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++G PNAGKS+++N ++G KV V+ K TT ++++G++T D Q DTPGL +
Sbjct: 11 VALMGPPNAGKSTLLNALLGQKVTIVTPKPQTTRNQIVGILTDDDAQTIFMDTPGLTQVR 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S K +++ W ++N +++M V D H ++ P+ L A ++ +
Sbjct: 71 GRLS----KTMIQAVWQSLNQADIIMPVLDAHLYIRHPEFLDRDLAPVAQALASEERPMI 126
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ +NKVDL K +L + + + IF S L GL L + +
Sbjct: 127 VVVNKVDLFGDKSRMLPLLTRLHEMWPRADIFPISALHKDGLADLVELI 175
>gi|258541745|ref|YP_003187178.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-01]
gi|384041666|ref|YP_005480410.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-12]
gi|384050181|ref|YP_005477244.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-03]
gi|384053291|ref|YP_005486385.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-07]
gi|384056523|ref|YP_005489190.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-22]
gi|384059164|ref|YP_005498292.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-26]
gi|384062458|ref|YP_005483100.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-32]
gi|384118534|ref|YP_005501158.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256632823|dbj|BAH98798.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-01]
gi|256635880|dbj|BAI01849.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-03]
gi|256638935|dbj|BAI04897.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-07]
gi|256641989|dbj|BAI07944.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-22]
gi|256645044|dbj|BAI10992.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-26]
gi|256648099|dbj|BAI14040.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-32]
gi|256651152|dbj|BAI17086.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654143|dbj|BAI20070.1| GTP-binding protein Era [Acetobacter pasteurianus IFO 3283-12]
Length = 300
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 11/167 (6%)
Query: 144 IIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSG 203
++GAPNAGKS+++N M G K++ VS K TT VLG++ + +QI + DTPG+ +
Sbjct: 13 LVGAPNAGKSTLLNRMAGAKLSIVSPKAQTTRFRVLGILMRGHSQILLVDTPGIFRPR-- 70
Query: 204 YSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLC 263
K + V +AW+ ++ +++ D LT V +IER+ A K+K L
Sbjct: 71 --RKLDRAMVAAAWTGAEDADITLLLVDARSGLTEA---VQTIIERL---AETKRKVWLV 122
Query: 264 MNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+NK DLV L A + LP E +FM S G G++ L L
Sbjct: 123 LNKTDLVPATALLPLTASITEKLP-VEHVFMVSARTGNGVEDLLDKL 168
>gi|451948992|ref|YP_007469587.1| GTP-binding protein Era [Desulfocapsa sulfexigens DSM 10523]
gi|451908340|gb|AGF79934.1| GTP-binding protein Era [Desulfocapsa sulfexigens DSM 10523]
Length = 308
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 102/182 (56%), Gaps = 14/182 (7%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E +S V I+G PNAGKS+++NY++G K++ VS K TT + +LGV+ QI + DT
Sbjct: 10 EPIRSGMVAIVGPPNAGKSTLMNYLLGQKISIVSHKPQTTRNRILGVVNDDKYQIVLLDT 69
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPD----SRVIRLIERM 250
PGL + + + V++ +ES L EV ++V+ + L P+ + ++E+M
Sbjct: 70 PGLHKARQPLNREMVRIAMES------LNEVDVIVYMIDVSLPLPEKVEQEKNKEMMEQM 123
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
A P +L +NKVDL+ K++ LL + +++ L + + S L G G + + + L
Sbjct: 124 EGVAAP---VILVLNKVDLLEKER-LLPMMKRYSELFPFHGVLPLSALTGEGTEVVVEEL 179
Query: 311 ME 312
++
Sbjct: 180 LK 181
>gi|301100808|ref|XP_002899493.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262103801|gb|EEY61853.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 877
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 82/140 (58%), Gaps = 6/140 (4%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
K++ + +IG PNAGKSSI+N ++ V+AVS K NTT +LG+ T+ D Q+ +DTPGL
Sbjct: 218 KALDLAVIGRPNAGKSSIMNRLLSVTVSAVSPKYNTTRDRILGIFTEGDVQLSFYDTPGL 277
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIER-MGKQAPP 256
+ K SH+ V+ V +A + ++ M+V D + L D ++ +E+ + A
Sbjct: 278 I--KPKESHEYVQTLVTAAAETLQGVDLSMLVVDSVKRL---DESALQALEKVLTTSAQV 332
Query: 257 KQKRVLCMNKVDLVTKKKDL 276
+L MNK DLV K++ L
Sbjct: 333 CSPTMLVMNKYDLVGKREQL 352
>gi|218462892|ref|ZP_03502983.1| GTP-binding protein Era [Rhizobium etli Kim 5]
gi|218663007|ref|ZP_03518937.1| GTP-binding protein Era [Rhizobium etli IE4771]
Length = 313
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N +VG KV+ VS K TT V G+ + QI DTPG+ +
Sbjct: 24 VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAIVRGIAIHDNAQIVFMDTPGIFKPR 83
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW +++M++ D R L ++ ++ + +Q ++
Sbjct: 84 RRLD----RAMVTSAWGGAKDADLIMLLIDSERGLRGDAEAILEGLKEV------RQPKI 133
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V ++DLL +A +ER FM S G+G + YL
Sbjct: 134 LVLNKIDRVN-REDLLALAASANDKIAFERTFMISAENGSGCDDVMDYL 181
>gi|449266007|gb|EMC77134.1| GTP-binding protein era like protein, partial [Columba livia]
Length = 375
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 83/148 (56%), Gaps = 7/148 (4%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
K + + IIGAPNAGKS++ N ++G KV VS+K +TT + GV+T DTQ+ I DTPGL
Sbjct: 18 KVLRIAIIGAPNAGKSTLSNQLLGRKVFPVSQKVHTTRCKARGVVTHEDTQLIILDTPGL 77
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLT--SPDSRVIRLIERMGKQAP 255
HK + + W ++ ++++V+ DV H T S V++ + +
Sbjct: 78 TSPFKAKRHKLEEAMLTDPWDSMKHADLVLVLVDVSDHWTRNSLSKEVLKCLSQF----- 132
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQF 283
P+ VL +NKVDL+ K LL++ +
Sbjct: 133 PQIPSVLVLNKVDLLKNKFILLELVTEL 160
>gi|329890078|ref|ZP_08268421.1| GTP-binding protein Era [Brevundimonas diminuta ATCC 11568]
gi|328845379|gb|EGF94943.1| GTP-binding protein Era [Brevundimonas diminuta ATCC 11568]
Length = 321
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 13/182 (7%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
Q++ IIGAPNAGKS+++N + G+KV+ V++K TT V G+ K D QI + DTPG
Sbjct: 13 QRAGFAAIIGAPNAGKSTLVNRLTGSKVSIVTQKVQTTRFPVRGIAIKGDAQIVLVDTPG 72
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHL-------TSPDSRVIRLIER 249
+ + + V SAW +V++ + D H+ T+ D R E
Sbjct: 73 IFTPRRRLD----RAMVASAWGGAQDADVVVHLIDAQSHIDAEGREGTAADRRSAEDTET 128
Query: 250 -MGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
+ K +L +NK+D + ++ LL ++++ Y +FM S L G G+ L
Sbjct: 129 IIANLKATDTKVILALNKIDGM-RRDTLLALSQRLFETGVYSEVFMISALSGDGVDDLKT 187
Query: 309 YL 310
L
Sbjct: 188 RL 189
>gi|307946584|ref|ZP_07661919.1| GTP-binding protein Era [Roseibium sp. TrichSKD4]
gi|307770248|gb|EFO29474.1| GTP-binding protein Era [Roseibium sp. TrichSKD4]
Length = 313
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPNAGKS+++N +VGTKV+ V+ K TT V G+ +Q+ DTPG+ K
Sbjct: 24 VALIGAPNAGKSTLLNQLVGTKVSIVTHKVQTTRAIVRGIAMHEASQLIFVDTPGIFKPK 83
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V++AWS ++ ++ D + + D V ++ R+ P K V
Sbjct: 84 RRLD----RAMVDTAWSGARDADLTALLIDARKGI---DEEVEDIMSRLSDL--PGDK-V 133
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D VT++ LL++A++ + ++ FM S L G G+ ++ +
Sbjct: 134 LILNKID-VTQRDQLLQLAQKAHEILPFKETFMVSALNGDGVASILDHF 181
>gi|412991355|emb|CCO16200.1| GTP-binding protein Era [Bathycoccus prasinos]
Length = 381
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 100/176 (56%), Gaps = 9/176 (5%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E S V I+G PNAGKS+++N ++GTK++ V++K TT H +LGV++ ++Q+ + DT
Sbjct: 71 ETHTSGYVAIVGRPNAGKSTLLNKILGTKLSIVTKKPQTTRHRILGVLSDEESQMVLLDT 130
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTS-PDSRVIRLIERMGKQ 253
PG+M +S ++ D + ++S S+V + L++V D T+ D + ++ +GK
Sbjct: 131 PGVM--RSAFNKLD-ETMLKSVRSSVKTADCLIIVIDGDAKETAEKDFENLLDVDVIGK- 186
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQY 309
P +C+NK D + + + ++ + F+ + G + S L G+K + Q+
Sbjct: 187 VPT----AVCVNKCDRIKDVQRIKELMKYFRQVEGVSEVIPISALNDTGVKEVVQW 238
>gi|254418675|ref|ZP_05032399.1| GTP-binding protein Era [Brevundimonas sp. BAL3]
gi|196184852|gb|EDX79828.1| GTP-binding protein Era [Brevundimonas sp. BAL3]
Length = 315
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 94/184 (51%), Gaps = 13/184 (7%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+Q++ IIGAPNAGKS+++N + G+KV+ V++K TT V G+ + D QI + DT
Sbjct: 5 ENQRAGFAAIIGAPNAGKSTLVNRLTGSKVSIVTQKVQTTRFPVRGIAMEGDAQIVLVDT 64
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHL-------TSPDSRVIRLI 247
PG+ + + + V SAW +V++ + D H+ T+ D R
Sbjct: 65 PGIFTPR----RRLDRAMVASAWGGAQDADVVVHLIDAQSHINAEGREGTAADRRSAEDT 120
Query: 248 ER-MGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
E + K +L +NK+D + ++ LL +++ Y+ ++M S G G++ L
Sbjct: 121 ETIIANLQSTGTKVILALNKIDGM-RRDTLLALSQTLFESGVYDEVYMISAANGDGVEDL 179
Query: 307 TQYL 310
Q L
Sbjct: 180 KQRL 183
>gi|423100546|ref|ZP_17088253.1| ribosome biogenesis GTPase Era [Listeria innocua ATCC 33091]
gi|370792770|gb|EHN60613.1| ribosome biogenesis GTPase Era [Listeria innocua ATCC 33091]
Length = 301
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 97/174 (55%), Gaps = 17/174 (9%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N+++G K+A +S K TT ++V GV T ++QI DTPG
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVFTTDESQIIFIDTPG- 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFE---VLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
++K + D V++ A+N F+ ++ V D D +I ++ + Q
Sbjct: 65 -IHKPKHKLGDFMVKI-----ALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNV--QT 116
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
P L +NK+DL++ +DL+K+ EQ++ L +E I S L+G+ + L +
Sbjct: 117 P----VFLLINKIDLIS-PEDLIKLIEQYRELMDFEEIIPISALEGSNVPNLLE 165
>gi|429769973|ref|ZP_19302057.1| ribosome biogenesis GTPase Era [Brevundimonas diminuta 470-4]
gi|429185886|gb|EKY26856.1| ribosome biogenesis GTPase Era [Brevundimonas diminuta 470-4]
Length = 321
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 13/192 (6%)
Query: 127 EEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKAD 186
E E + +Q + IIGAPNAGKS+++N + G+KV+ V++K TT V G+ K D
Sbjct: 3 ETPETTEISNQHAGFAAIIGAPNAGKSTLVNRLTGSKVSIVTQKVQTTRFPVRGIAIKGD 62
Query: 187 TQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHL-------TSP 239
QI + DTPG+ + + V SAW +V++ + D H+ T
Sbjct: 63 AQIVLVDTPGIFTPRRRLD----RAMVASAWGGAQDADVVVHLIDAQSHIDAEGREGTPA 118
Query: 240 DSRVIRLIER-MGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGL 298
D R E + K +L +NK+D + ++ LL ++++ Y +FM S L
Sbjct: 119 DRRSAEDTETIIANLQATDTKVILALNKIDGM-RRDTLLALSQRLFETGVYSEVFMISAL 177
Query: 299 KGAGLKALTQYL 310
G G+ L L
Sbjct: 178 SGDGVDDLLTRL 189
>gi|212704882|ref|ZP_03313010.1| hypothetical protein DESPIG_02949 [Desulfovibrio piger ATCC 29098]
gi|212671724|gb|EEB32207.1| ribosome biogenesis GTPase Era [Desulfovibrio piger ATCC 29098]
Length = 309
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 4/173 (2%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++G PNAGKS+++N ++G KV V+ K TT ++++G++T D Q DTPGL +
Sbjct: 11 VALMGPPNAGKSTLLNGLMGQKVTIVTPKPQTTRNQIVGILTDDDAQAIFMDTPGLSQVR 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S K +++ W ++ +V+M V D H ++ P+ L A ++ V
Sbjct: 71 GRLS----KTMIQAVWQSLGQADVIMPVLDAHLYIRHPEYLDRDLAPVAEALASDERPMV 126
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
+ NKVDL K +L + + + IF S L GL L + + +Q
Sbjct: 127 VVANKVDLFADKSRMLPLLTRLNEMWPRAEIFPVSALNKDGLPELAKLIKKQL 179
>gi|156741277|ref|YP_001431406.1| GTP-binding protein Era [Roseiflexus castenholzii DSM 13941]
gi|156232605|gb|ABU57388.1| GTP-binding protein Era [Roseiflexus castenholzii DSM 13941]
Length = 449
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 95/181 (52%), Gaps = 14/181 (7%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
+ E +S V ++G PN GKS+++N ++G KVA VS K TT + G++T+ D QI
Sbjct: 154 LPEGPHRSGFVALVGRPNVGKSTLLNALLGQKVAIVSPKPQTTRTAIRGILTRPDAQIVF 213
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMG 251
DTPG+ ++ VK A A+ +V+ +V D+ R S D R+ L+ +
Sbjct: 214 VDTPGIHEPRNRLGAYMVK----QARRAIPDADVVCMVVDITRPPGSLDERIAALVRKA- 268
Query: 252 KQAPPKQKRVLCMNKVDLVTKK-KDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+R+L +NK+DL TK+ D L+ ++ L ++ S L+G GL AL +
Sbjct: 269 -----SARRILVLNKIDLRTKRGSDNLQA---YRALAPWDMEVAVSALRGHGLDALVDEI 320
Query: 311 M 311
+
Sbjct: 321 V 321
>gi|414341279|ref|YP_006982800.1| GTP-binding protein Era [Gluconobacter oxydans H24]
gi|411026614|gb|AFV99868.1| GTP-binding protein Era [Gluconobacter oxydans H24]
gi|453330554|dbj|GAC87300.1| GTP-binding protein Era [Gluconobacter thailandicus NBRC 3255]
Length = 301
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 90/173 (52%), Gaps = 11/173 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++GAPNAGKS+++N + G K++ VS K TT LG++ D QI + D PG+ +
Sbjct: 14 VALVGAPNAGKSTLLNRIAGAKLSIVSPKAQTTRFRTLGIVVHQDAQIILVDLPGIFKPR 73
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW+ ++ +++ D L D R E +GK A K+K
Sbjct: 74 RRLD----RAMVNAAWTGSQDADLTLLLIDAKAGLRE-DVR-----EIIGKLAEGKKKVW 123
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK DLV+ ++LL + ++ L E +FM S G G++ L +L +
Sbjct: 124 LVLNKTDLVS-AEELLPLTQEVSGLLSVEHVFMLSARSGDGVEDLMNHLAREL 175
>gi|337269775|ref|YP_004613830.1| GTP-binding protein Era [Mesorhizobium opportunistum WSM2075]
gi|336030085|gb|AEH89736.1| GTP-binding protein Era [Mesorhizobium opportunistum WSM2075]
Length = 306
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 88/173 (50%), Gaps = 11/173 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPNAGKS+++N +VG KV+ V+ K TT V G+ + QI DTPG+ K
Sbjct: 17 VALIGAPNAGKSTLVNQLVGAKVSIVTHKVQTTRAIVRGIAMHDNAQIVFVDTPGIFKPK 76
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
V +AW ++++++ D R + D+ I +ER+ +Q
Sbjct: 77 RRLD----TAMVTTAWGGAKDADIVLLLIDAERGIRG-DADAI--LERLKDV---RQPMA 126
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NKVD V K + LL ++ ++R FM S L G+G K L YL +
Sbjct: 127 LILNKVDRV-KHETLLALSAAANEKVPFKRTFMVSALTGSGCKDLLDYLAQAL 178
>gi|149186755|ref|ZP_01865066.1| GTP-binding protein Era [Erythrobacter sp. SD-21]
gi|148829663|gb|EDL48103.1| GTP-binding protein Era [Erythrobacter sp. SD-21]
Length = 310
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 21/176 (11%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMT----KADTQICIFDTPGL 197
V +IGAPNAGKS+++N +VG KVA S K TT +LG+ +ADTQ+ + DTPG+
Sbjct: 17 VAVIGAPNAGKSTLVNQLVGQKVAITSAKAQTTRARMLGIALHKSEEADTQMVLIDTPGI 76
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDV---HRHLTSPDSRVIRLIERMGKQA 254
K K + V +AW + ++++ D RH P L+E + K+
Sbjct: 77 FSPK----RKLDRAMVSAAWDGTESADAVLLMVDPIKQRRHELEP------LVEALAKRP 126
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
++++L +NKVD KK+ LL +A++ + ++ S L G+ L + L
Sbjct: 127 ---ERKILVLNKVD-AAKKEPLLALAQELAEKVEFAEVYFVSALTSDGVPELKESL 178
>gi|452750895|ref|ZP_21950642.1| GTP-binding protein Era [alpha proteobacterium JLT2015]
gi|451962089|gb|EMD84498.1| GTP-binding protein Era [alpha proteobacterium JLT2015]
Length = 296
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 90/170 (52%), Gaps = 11/170 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ +IGAPNAGKS+++N +VG KVA VS + TT ++GV + +TQ+ + DTPG+ K
Sbjct: 9 IAVIGAPNAGKSTLVNTLVGQKVAIVSPRVQTTRARLMGVAVEDETQMILIDTPGIFTPK 68
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW ++++++ D R LT +++ +E K ++
Sbjct: 69 KTLE----RAMVHTAWEGTRGADLILMLVDSKRGLTDEVEEILKSLE------SDKTPKM 118
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
L + KVD + K++LL + ++ + FM S G G++ L L+
Sbjct: 119 LILTKVD-IAPKQNLLLLTQRLNRRGDFAETFMISAETGDGMEDLKATLL 167
>gi|420241574|ref|ZP_14745696.1| GTP-binding protein Era [Rhizobium sp. CF080]
gi|398070546|gb|EJL61841.1| GTP-binding protein Era [Rhizobium sp. CF080]
Length = 317
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 11/173 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N +VG KV+ VS K TT V G+ + QI DTPG+ +
Sbjct: 27 VALIGPTNAGKSTLLNRLVGAKVSIVSHKVQTTRAIVRGIAIHNNAQIVFMDTPGIFKPR 86
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW ++++++ D R + ++ ++ + Q ++
Sbjct: 87 RRLD----RAMVTSAWGGAKDADLILLLIDSERGIRGDAEAILEGLKEV------HQPKI 136
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+D V + +DLLK+ +ER FM S G+G L YL ++
Sbjct: 137 LVLNKIDRV-RHEDLLKLTATANEAVPFERTFMVSATTGSGCDDLMDYLADKL 188
>gi|381169119|ref|ZP_09878293.1| GTP-binding protein (era) [Phaeospirillum molischianum DSM 120]
gi|380681733|emb|CCG43115.1| GTP-binding protein (era) [Phaeospirillum molischianum DSM 120]
Length = 301
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 92/176 (52%), Gaps = 11/176 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
+ Q+ V ++GAPNAGKS+++N +VGTKV+ VS K TT VLG+ D Q+ + DT
Sbjct: 5 DGQRCGFVAVVGAPNAGKSTLVNALVGTKVSIVSPKVQTTRFRVLGICMTGDAQVILVDT 64
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ + + V +AW+ E + +V D R ++ ++ G+Q
Sbjct: 65 PGIFQPRKRLE----RAMVAAAWNGAADAEHVCLVVDAQRGDDDDTRAIVAKLKEAGRQV 120
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
VL +NK+DL+ ++ LL++ + + +FM S LKG G+ L +L
Sbjct: 121 ------VLVLNKIDLI-RRDTLLELTARLHAEGLFSDVFMLSALKGDGVDDLMAHL 169
>gi|350269033|ref|YP_004880341.1| GTP-binding protein Era [Oscillibacter valericigenes Sjm18-20]
gi|348593875|dbj|BAK97835.1| GTP-binding protein Era [Oscillibacter valericigenes Sjm18-20]
Length = 299
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
+K+ V + G PN GKSS+ N +VG KVA VS K TT + + GV+ + DTQ + DTPG
Sbjct: 5 KKTAMVTVCGRPNVGKSSLTNTLVGEKVAIVSNKAQTTRNRICGVVNRGDTQFVLMDTPG 64
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
L KS VK+ V S+ S V + +++ + H+ +P+ + LI+R+ ++ P
Sbjct: 65 LHKPKSALGDYMVKI-VTSSLSDV---DCALLLVEPIPHVGAPE---MSLIQRVREEKIP 117
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
+LC+NK D V + L +A + G+ I S G GL L ME++ +
Sbjct: 118 A---ILCINKTDTVKPDQLLPVIAAYNEAWDGFSAIIPISAHTGDGLDDLVAE-MEKYAE 173
Query: 317 LG 318
G
Sbjct: 174 EG 175
>gi|224003597|ref|XP_002291470.1| gtp-binding protein [Thalassiosira pseudonana CCMP1335]
gi|220973246|gb|EED91577.1| gtp-binding protein [Thalassiosira pseudonana CCMP1335]
Length = 446
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 1/144 (0%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QK + V I+GAPNAGKS ++N ++G+KVAAVSRK +TT +LG T DTQ+ DTPG
Sbjct: 68 QKRLDVAIVGAPNAGKSQLLNSLIGSKVAAVSRKRHTTRTGILGARTFDDTQLVFIDTPG 127
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ ++ + V+ + A S + + +++V D R + R + + + ++
Sbjct: 128 FLHHEMSVK-EGVRKLLGEASSEMESADFVLLVVDAARKMEDDLRRTLVTLMFLALRSKG 186
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVA 280
+ + + +NKVDLV+ K+ LL A
Sbjct: 187 RNEFAVVLNKVDLVSPKEKLLMTA 210
>gi|218515109|ref|ZP_03511949.1| GTP-binding protein Era [Rhizobium etli 8C-3]
Length = 272
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N +VG KV+ VS K TT V G+ + QI DTPG+ +
Sbjct: 24 VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAIVRGIAIHDNAQIVFMDTPGIFKPR 83
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW +++M++ D R L ++ ++ + +Q ++
Sbjct: 84 RRLD----RAMVTSAWGGAKDADLIMLLIDSERGLRGDAEAILEGLKEV------RQPKI 133
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V ++DLL +A +ER FM S G+G + YL
Sbjct: 134 LVLNKIDRVN-REDLLALAASANEKIAFERTFMISAENGSGCDDVMDYL 181
>gi|189182921|ref|YP_001936706.1| GTP-binding protein Era [Orientia tsutsugamushi str. Ikeda]
gi|189179692|dbj|BAG39472.1| GTP-binding protein Era [Orientia tsutsugamushi str. Ikeda]
Length = 306
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 96/177 (54%), Gaps = 12/177 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
++ QK++ V I+G PN+GKS+++N ++G K++ V+ K TT + G++T TQ+ D
Sbjct: 9 DKQQKTMVVSILGMPNSGKSTLLNRLIGQKISIVTPKVQTTRSAITGIVTYNLTQLIFID 68
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG+ K K V AW+++ ++ +++ D+ + L + ++ ++ R+ Q
Sbjct: 69 TPGIFQPKKTLE----KAMVRCAWTSIVGADIALLIIDITKKL---NEQIQIILTRLISQ 121
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K K + +NK+D+ +L ++ K L +I S L G G++ L QY+
Sbjct: 122 ---KIKFCIILNKIDICV--NNLTQLMNDLKQLSINAKIIAISALNGNGVQELLQYI 173
>gi|94970562|ref|YP_592610.1| GTP-binding protein Era [Candidatus Koribacter versatilis Ellin345]
gi|94552612|gb|ABF42536.1| GTP-binding protein Era [Candidatus Koribacter versatilis Ellin345]
Length = 324
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 22/183 (12%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMT-KADTQICIFDTPG 196
+S V IIG PNAGKS+++N +VG K+A V+ K TT + + G++T QI + DTPG
Sbjct: 4 RSGFVSIIGRPNAGKSTLLNALVGEKIAIVTHKPQTTRNRIQGIVTVPKKGQIVLVDTPG 63
Query: 197 L-----MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMG 251
+ LNK ++ + A+ ++L+ + DV D + L+++ G
Sbjct: 64 VHKPDKTLNKR---------MMQEVYDALEGCDLLLYIHDVTHKFEKEDEYTLSLVKKTG 114
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
Q +L +NK+DL+ K K LL++ QF L ++ I S KG+GL L + ++
Sbjct: 115 ------QPVMLLLNKIDLIAKPK-LLEIITQFSTLHDFKEIIPISAAKGSGLDILRKKVL 167
Query: 312 EQF 314
+
Sbjct: 168 QSL 170
>gi|357975275|ref|ZP_09139246.1| GTPase Era [Sphingomonas sp. KC8]
Length = 311
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++GAPNAGKS+++N +VG KVA VS K TT ++G+ ++QI + DTPG+ +
Sbjct: 22 VAVVGAPNAGKSTLVNALVGQKVAIVSPKAQTTRVRLMGLAIHENSQILLVDTPGIFEAR 81
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW +++ +V D T +++ LI+ + + PK +
Sbjct: 82 RRLD----RAMVAAAWGGTTDADLIALVIDAK---TGIKAKIDALIDTLKDRREPK---I 131
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ +NKVD VT K+ LL++A + + E IFM S G G+ L L
Sbjct: 132 VILNKVD-VTPKEKLLELAVKLQDALAPETIFMISASTGDGVADLKAAL 179
>gi|218671650|ref|ZP_03521319.1| GTP-binding protein Era [Rhizobium etli GR56]
Length = 274
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N +VG KV+ VS K TT V G+ + QI DTPG+ +
Sbjct: 24 VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAIVRGIAIHDNAQIVFMDTPGIFKPR 83
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW +++M++ D R L ++ ++ + +Q ++
Sbjct: 84 RRLD----RAMVTSAWGGAKDADLIMLLIDSERGLRGDAEAILEGLKEV------QQPKI 133
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V ++DLL +A +ER FM S G+G + YL
Sbjct: 134 LVLNKIDRVN-REDLLALAASANEKIAFERTFMISAENGSGCDDVMDYL 181
>gi|159155770|gb|AAI54965.1| LOC100127247 protein [Xenopus laevis]
Length = 359
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 83/144 (57%), Gaps = 7/144 (4%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ IIGAPNAGKS++ N ++G KV VS+K +TT + GV+T+ +TQ+ + DTPG++
Sbjct: 4 IAIIGAPNAGKSTLSNQLLGRKVFPVSKKVHTTRCQAQGVITEGETQLILLDTPGMVTAS 63
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLT--SPDSRVIRLIERMGKQAPPKQK 259
H K + W ++ ++++V+ DV H T S + V++ + + Q P
Sbjct: 64 KVKRHNLEKSLLHDPWQSMESADLVLVLLDVSDHWTRCSLNFEVLKCLSQY--QNIPS-- 119
Query: 260 RVLCMNKVDLVTKKKDLLKVAEQF 283
+L MNKVDL+ +K LL + Q
Sbjct: 120 -ILVMNKVDLIKQKGILLDLTNQL 142
>gi|296283698|ref|ZP_06861696.1| GTP-binding protein Era [Citromicrobium bathyomarinum JL354]
Length = 292
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 92/174 (52%), Gaps = 21/174 (12%)
Query: 144 IIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMT----KADTQICIFDTPGLML 199
++GAPNAGKS+++N +VG KVA VS K TT +LG+ A+TQ+ + DTPG+
Sbjct: 1 MLGAPNAGKSTLVNALVGQKVAIVSAKAQTTRARMLGIALHENDDANTQMILVDTPGIFA 60
Query: 200 NKSGYSHKDVKVRVESAWSAVNLFEVLMVVFD---VHRHLTSPDSRVIRLIERMGKQAPP 256
+ + V +AW + ++++ D RH P LIE++ ++
Sbjct: 61 PRRRLD----RAMVSAAWEGAESADAVLLLVDPIKQRRHELEP------LIEQLAQR--- 107
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+K++L +NKVD + KK+ LL +A++ + I+ S L G G+ L L
Sbjct: 108 PEKKILVLNKVD-IAKKEPLLALAQELSTKVDFAEIYFISALSGDGVTELKDAL 160
>gi|315499945|ref|YP_004088748.1| gtp-binding protein era [Asticcacaulis excentricus CB 48]
gi|315417957|gb|ADU14597.1| GTP-binding protein Era [Asticcacaulis excentricus CB 48]
Length = 323
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 94/184 (51%), Gaps = 17/184 (9%)
Query: 143 GIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKS 202
IIGAPNAGKS+++N +VG+KV+ V++K TT V G+ QI + DTPG+ +
Sbjct: 17 AIIGAPNAGKSTLVNALVGSKVSIVTQKVQTTRFPVRGIAIHGKAQIVLVDTPGIFKPRR 76
Query: 203 GYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHL-----------TSPDSRVIRLIERMG 251
+ V+SAW ++++++ D HL T D + E +
Sbjct: 77 RLD----RAMVKSAWGGAEDADIVVMLIDAPAHLAVHFPAPDTKPTGADKLAVEDAETII 132
Query: 252 KQAPPKQKR-VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+R +L +NK+DL+ ++ +LL +A+ ++++FM S KG G+ L + L
Sbjct: 133 AGLKANNRRAILVLNKIDLL-RRDNLLALADSLFKEGVFDQVFMISAEKGNGISDLMEAL 191
Query: 311 MEQF 314
++
Sbjct: 192 ADKM 195
>gi|292490850|ref|YP_003526289.1| GTP-binding protein Era [Nitrosococcus halophilus Nc4]
gi|291579445|gb|ADE13902.1| GTP-binding protein Era [Nitrosococcus halophilus Nc4]
Length = 303
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 10/165 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIG PN GKSS++N ++G K++ +R+ TT H +LG+ T D Q DTPGL +
Sbjct: 15 VAIIGRPNVGKSSLLNCILGQKISITARRPQTTRHRILGIKTSPDAQAIYVDTPGLQDKE 74
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
++ + +SA V+L ++ + + +R T D R+++ + R G V
Sbjct: 75 RRLMNRYLNRAADSAIEDVDL---ILFIVEAYR-FTEEDERILQRLRRRGVPI------V 124
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
L +NKVD V KK LL + EQ + I S KG + L
Sbjct: 125 LVLNKVDRVADKKTLLPIMEQLSKKMEFAAIVPVSAWKGDNVAVL 169
>gi|301058126|ref|ZP_07199178.1| GTP-binding protein Era [delta proteobacterium NaphS2]
gi|300447758|gb|EFK11471.1| GTP-binding protein Era [delta proteobacterium NaphS2]
Length = 294
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 98/178 (55%), Gaps = 11/178 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS +GI+G PN GKS+++N ++GTK+A VS K TT + +LGV + D Q+ DTPG+
Sbjct: 4 KSGFIGIVGPPNVGKSTLLNRIMGTKLAIVSPKPQTTRNRILGVFHQHDCQMVFMDTPGI 63
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
++ HK + V++A++A + ++++++ + +IR ++ + K
Sbjct: 64 HRTRTAL-HKSM---VDAAFAAFHEVDMILMMVEADPRENPAVPSIIRGLKSIAK----- 114
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFK 315
R L +NK+D V KK+ +L + + ++ I S LKG G+ L Q L + K
Sbjct: 115 -PRFLAINKIDRV-KKEHILPLLADYGRKLDFDAIIPISALKGNGVDTLLQELKRRLK 170
>gi|429727773|ref|ZP_19262530.1| ribosome biogenesis GTPase Era [Peptostreptococcus anaerobius VPI
4330]
gi|429151624|gb|EKX94485.1| ribosome biogenesis GTPase Era [Peptostreptococcus anaerobius VPI
4330]
Length = 299
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N MVG K+A +S K TT + + V T + QI DTPG+
Sbjct: 4 KSGFVSIVGRPNVGKSTLMNDMVGEKIAIMSDKPQTTRNTIQAVYTDEEAQIVFMDTPGI 63
Query: 198 M--LNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
NK G ++ V+SA A + ++ V D R + DS + IE + K +
Sbjct: 64 HKPKNKLG------EMMVKSASDAFKNVDSIIFVVDDSRTIGKGDSMI---IENLKKTST 114
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P L +NK+D + K+DL ++ + L ++ I TS LKG+ + +L + +
Sbjct: 115 P---VFLVINKIDKIDNKEDLFEMIRMYDDLNVFKEIIPTSALKGSNIDSLIKVI 166
>gi|313884139|ref|ZP_07817905.1| ribosome biogenesis GTPase Era [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620586|gb|EFR32009.1| ribosome biogenesis GTPase Era [Eremococcus coleocola
ACS-139-V-Col8]
Length = 301
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 96/175 (54%), Gaps = 11/175 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V +IG PN GKS+++N +VG K+A +S K TT + + GV T AD+Q+ DTPG+
Sbjct: 7 KSGFVALIGRPNVGKSTLLNKVVGQKIAIMSDKAQTTRNRIQGVYTDADSQVVFIDTPGI 66
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K + +++A+SA+ + + VV + + P R++ IER P
Sbjct: 67 HKPKHALGN----FMLKTAYSALQGADAVCVVVNAAEKI-GPGDRLV--IERAKNVQVP- 118
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L +NK+DLV+ ++ +L+ E +K L + ++F S L+G + L + L E
Sbjct: 119 --LFLLINKIDLVSPEQ-VLQAIESYKDLADFAQVFPISALEGNNVPELVEGLKE 170
>gi|126728498|ref|ZP_01744314.1| GTP-binding protein Era [Sagittula stellata E-37]
gi|126711463|gb|EBA10513.1| GTP-binding protein Era [Sagittula stellata E-37]
Length = 302
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 93/170 (54%), Gaps = 11/170 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ +IG PNAGKS++ N MVG KV+ V+ K TT + GV + D+Q+ DTPGL +
Sbjct: 8 IALIGEPNAGKSTLTNRMVGAKVSIVTHKVQTTRARIRGVAMEGDSQLIFVDTPGLFQPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW ++++++ + HR T R++ G P+ +RV
Sbjct: 68 RRLD----RAMVAAAWGGAADADIVVLLVEAHRGKTPGVDRILE-----GLAELPRGRRV 118
Query: 262 -LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V K ++LL ++++ + +E+ FM S +G G+ L ++L
Sbjct: 119 ALAINKIDRV-KAEELLALSQELNEIHAFEKTFMISAERGYGVDDLREWL 167
>gi|431806035|ref|YP_007232936.1| GTP-binding protein Era [Liberibacter crescens BT-1]
gi|430800010|gb|AGA64681.1| GTP-binding protein Era [Liberibacter crescens BT-1]
Length = 310
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 94/187 (50%), Gaps = 12/187 (6%)
Query: 125 QEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGV-MT 183
Q +E ++S V +IGA NAGKS++IN +V KV+ V+ K TT V G+ +
Sbjct: 13 QLQEYNNTPSLQKRSGFVAVIGATNAGKSTLINRLVNAKVSIVTHKVQTTRSIVRGITIY 72
Query: 184 KADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRV 243
TQI DTPG+ K+ + +AW ++ ++ D R L PD V
Sbjct: 73 NKVTQIVFIDTPGIFNPKNNIDQS----MINAAWKTPKNADITFLIIDSKRGL-QPD--V 125
Query: 244 IRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGL 303
++ER+ K ++VL +NK+D + K LL+ A+ L +ER FM S KG G
Sbjct: 126 YTILERICKTP---YRKVLVLNKIDCI-KPHILLEQAKTVNELSDFERTFMISASKGYGC 181
Query: 304 KALTQYL 310
+ + YL
Sbjct: 182 QNILDYL 188
>gi|347819051|ref|ZP_08872485.1| GTPase Era [Verminephrobacter aporrectodeae subsp. tuberculatae
At4]
Length = 325
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 13/141 (9%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
Q+ + I+G PN GKS+++N +VG K++ SRK TT H + G+ T+A TQ DTPG
Sbjct: 30 QRCGVIAIVGKPNVGKSTLLNALVGEKISITSRKAQTTRHRITGIRTRAQTQFIFVDTPG 89
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHR-HLTSPDSRVIRLIERMGKQAP 255
+G +K + V A V+L ++F V + T D+RV+ L++
Sbjct: 90 FQTRHAGALNKSLNKTVLGAIGDVDL-----ILFAVEAGNFTLADARVLSLLK------- 137
Query: 256 PKQKRVLCMNKVDLVTKKKDL 276
P+ +L NK+DLV ++ DL
Sbjct: 138 PEIPALLVANKLDLVQRRADL 158
>gi|319790169|ref|YP_004151802.1| GTP-binding protein Era [Thermovibrio ammonificans HB-1]
gi|317114671|gb|ADU97161.1| GTP-binding protein Era [Thermovibrio ammonificans HB-1]
Length = 305
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 93/170 (54%), Gaps = 9/170 (5%)
Query: 134 EEDQK--SVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
EE++K S V I+G PN GKS+++N ++GTKVA V+ K TT H ++GV D QI
Sbjct: 2 EENRKFRSGYVAILGRPNVGKSTLLNSLLGTKVAIVTDKPQTTRHRIVGVKHLKDAQIVF 61
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMG 251
DTPG+ K + + E A+S V ++++ + D + LT D ++ ++++G
Sbjct: 62 LDTPGIHKEKFELN----RYMNEIAFSVVPDADIILFLIDARQGLTEADRKI---LQKIG 114
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGA 301
++ K ++ +NK+D V K++ L + E K P + I S +G
Sbjct: 115 EEKRKDTKVIVVINKIDGVNKEELLPLIEEIHKEFPFVDEIIPISASRGT 164
>gi|334344420|ref|YP_004552972.1| GTP-binding protein Era-like-protein [Sphingobium chlorophenolicum
L-1]
gi|334101042|gb|AEG48466.1| GTP-binding protein Era-like-protein [Sphingobium chlorophenolicum
L-1]
Length = 302
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 88/172 (51%), Gaps = 11/172 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E Q+ + I+GAPNAGKS+++N +VG KVA S K TT V+GV + D Q+ + DT
Sbjct: 6 ESQRCGVIAIVGAPNAGKSTLVNALVGQKVAITSPKAQTTRTRVMGVAIEGDAQMVLVDT 65
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ K + V++AW +++ +V D L + ++ + A
Sbjct: 66 PGIFAPKRRLD----RAMVQAAWGGAQGADLIALVVDGKAGLGAKMEPIVSAL------A 115
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
+K+ L +NKVD+ K+K L+ ++ L E F+++ G GL L
Sbjct: 116 ARPEKKWLILNKVDIAIKEKLLVHTQRLYEQLDIAETFFVSAA-TGDGLPEL 166
>gi|16800567|ref|NP_470835.1| GTP-binding protein Era [Listeria innocua Clip11262]
gi|422412950|ref|ZP_16489909.1| GTP-binding protein Era [Listeria innocua FSL S4-378]
gi|422415965|ref|ZP_16492922.1| GTP-binding protein Era [Listeria innocua FSL J1-023]
gi|21263591|sp|Q92BP8.1|ERA_LISIN RecName: Full=GTPase Era
gi|16413972|emb|CAC96730.1| lin1499 [Listeria innocua Clip11262]
gi|313618893|gb|EFR90758.1| GTP-binding protein Era [Listeria innocua FSL S4-378]
gi|313623743|gb|EFR93885.1| GTP-binding protein Era [Listeria innocua FSL J1-023]
Length = 301
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 96/174 (55%), Gaps = 17/174 (9%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N+++G K+A +S K TT ++V GV T ++QI DTPG
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVFTTDESQIIFIDTPG- 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFE---VLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
++K + D V++ A+N F+ ++ V D D +I ++ + Q
Sbjct: 65 -IHKPKHKLGDFMVKI-----ALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNV--QT 116
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
P L +NK+DL++ +DL+K+ EQ++ L +E I S L+G + L +
Sbjct: 117 P----VFLLINKIDLIS-PEDLIKLIEQYRELMDFEEIIPISALEGNNVPNLLE 165
>gi|254281726|ref|ZP_04956694.1| GTP-binding protein Era [gamma proteobacterium NOR51-B]
gi|219677929|gb|EED34278.1| GTP-binding protein Era [gamma proteobacterium NOR51-B]
Length = 300
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 10/173 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++NY++G K++ SRK TT ++VLG+ T +TQI DTPG+
Sbjct: 12 VAIVGRPNVGKSTLLNYLLGQKISITSRKPQTTRNQVLGIKTDGNTQIIFVDTPGI---H 68
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S + +A +AVN ++++ V D +R D ++ K A P
Sbjct: 69 SSEPRAINRFMNRTAAAAVNDVDLVLQVCDRNRWTEEDD----LVLSAASKSAAPV---A 121
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NKVDL+ LL AE + +F S L+ L L ++ ++
Sbjct: 122 LVINKVDLLDHPDQLLNFAETMTQKHNFTGVFPISALRNKQLDTLDDFIADKM 174
>gi|429462663|ref|YP_007184126.1| GTP-binding protein Era [Candidatus Kinetoplastibacterium crithidii
(ex Angomonas deanei ATCC 30255)]
gi|451811581|ref|YP_007448036.1| GTP-binding protein Era [Candidatus Kinetoplastibacterium crithidii
TCC036E]
gi|429338177|gb|AFZ82600.1| GTP-binding protein Era [Candidatus Kinetoplastibacterium crithidii
(ex Angomonas deanei ATCC 30255)]
gi|451776739|gb|AGF47738.1| GTP-binding protein Era [Candidatus Kinetoplastibacterium crithidii
TCC036E]
Length = 298
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 11/165 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+GIIG PN GKS++ N ++G K++ VS+K TT H + GV+T+ D Q DTPG L
Sbjct: 13 IGIIGRPNVGKSTLNNALLGHKLSIVSKKAQTTRHRIKGVLTRKDAQFIFVDTPGFQLKY 72
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
++ + V V+L ++ V D R L DSR++ +I P +K +
Sbjct: 73 LNPLNRMMNRIVSQELLEVDL---IIHVIDSARWL-EEDSRLLEII-------PRSKKVI 121
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
L +NK+DL+ K +LL + ++ Y+ I S LK + AL
Sbjct: 122 LILNKIDLLKDKSELLPFISKLTNIYPYDSIVPVSALKKHNIDAL 166
>gi|86357029|ref|YP_468921.1| GTP-binding protein Era [Rhizobium etli CFN 42]
gi|86281131|gb|ABC90194.1| GTP-binding protein [Rhizobium etli CFN 42]
Length = 313
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N +VG KV+ VS K TT V G+ + QI DTPG+ +
Sbjct: 24 VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAIVRGIAIHDNAQIVFMDTPGIFKPR 83
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW +++M++ D R L ++ ++ + +Q ++
Sbjct: 84 RRLD----RAMVTSAWGGAKDADLIMLLIDSERGLRGDAEAILEGLKEV------QQPKI 133
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V ++DLL +A ++R FM S G+G + YL
Sbjct: 134 LVLNKIDRVN-REDLLALAASANEKIAFDRTFMISAETGSGCDDVMDYL 181
>gi|340378932|ref|XP_003387981.1| PREDICTED: GTPase Era, mitochondrial-like [Amphimedon
queenslandica]
Length = 309
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 97/184 (52%), Gaps = 11/184 (5%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
Q+ + ++G PNAGKS+++N +VG VA VS K +TT + LGV T+ D Q+ + DTPG
Sbjct: 23 QRLLRAAVLGLPNAGKSTLVNQLVGRNVAGVSPKPHTTRSQALGVFTEGDHQVVLIDTPG 82
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLT--SPDSRVIRLIERMGKQA 254
++ + G K K V + + ++++V+ D T + +++++++ +
Sbjct: 83 VVSLQYGRKMKFSKPFVTGPKRSTDEADLMLVMIDASDRYTRFKLNEQLLKIMKEVNLPT 142
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPG---YERIFMTSGLKGAGLKALTQYLM 311
L +NKVDL+ K+ LLK+ + + +FM S L G G+ L YL+
Sbjct: 143 S------LVINKVDLLGYKQLLLKIVDSINSQSTAHPFNEVFMISALTGDGVDKLKDYLL 196
Query: 312 EQFK 315
+ K
Sbjct: 197 DNTK 200
>gi|259046831|ref|ZP_05737232.1| GTP-binding protein Era [Granulicatella adiacens ATCC 49175]
gi|259036454|gb|EEW37709.1| GTP-binding protein Era [Granulicatella adiacens ATCC 49175]
Length = 302
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 96/175 (54%), Gaps = 11/175 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+ +NY++G K+A +S K TT +++ GV TK + QI DTPG+
Sbjct: 6 KSGFVAIVGRPNVGKSTFMNYVLGQKIAIMSDKAQTTRNKIQGVYTKDNAQIVFLDTPGI 65
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K H+ + V+SA+SA+ + ++ + +V D +I ++ G + P
Sbjct: 66 HKPK----HELGEFMVKSAYSALKEVDAVLFMVNVSEKRGPGDDFIIEKLK--GIKTPI- 118
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L +NK+DLVT + LL+ E +K + +F S L+G + L + L+E
Sbjct: 119 ---FLVLNKIDLVTPEV-LLERVESYKDALDFAGVFPISVLQGNNVNELMEALIE 169
>gi|289423889|ref|ZP_06425682.1| GTP-binding protein Era [Peptostreptococcus anaerobius 653-L]
gi|289155666|gb|EFD04338.1| GTP-binding protein Era [Peptostreptococcus anaerobius 653-L]
Length = 299
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N MVG K+A +S K TT + + V T + QI DTPG+
Sbjct: 4 KSGFVSIVGRPNVGKSTLMNDMVGEKIAIMSDKPQTTRNTIQAVYTDEEAQIVFMDTPGI 63
Query: 198 M--LNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
NK G ++ V+SA A + ++ V D R + DS + IE + K +
Sbjct: 64 HKPKNKLG------EMMVKSASDAFKNVDSIIFVVDDSRTIGKGDSLI---IENLKKTST 114
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P L +NK+D + K+DL ++ + L ++ I TS LKG+ + +L + +
Sbjct: 115 P---VFLVINKIDKIDNKEDLFEMIRMYDDLNVFKEIIPTSALKGSNIDSLIKVI 166
>gi|326402426|ref|YP_004282507.1| GTP-binding protein Era [Acidiphilium multivorum AIU301]
gi|325049287|dbj|BAJ79625.1| GTP-binding protein Era [Acidiphilium multivorum AIU301]
Length = 295
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++G PNAGKS+++N VG KV+ V+ K TT + G++ + QI + DTPG+ K
Sbjct: 8 VALLGRPNAGKSTLLNQAVGAKVSIVTPKAQTTRFRISGIVMRGGDQIVLVDTPGIFAPK 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW V ++ ++ D + PD L E + A + R
Sbjct: 68 RRLD----RAMVAAAWEGVAGADLACLIVDAAK--ADPDD----LAEPIEALAATGRPRW 117
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+DL+ + K LL +AE G+ +FM S LK G+ L L
Sbjct: 118 LILNKIDLLPRDK-LLPLAETLARQGGFAEVFMISALKRDGVDRLLDAL 165
>gi|218781247|ref|YP_002432565.1| GTP-binding protein Era [Desulfatibacillum alkenivorans AK-01]
gi|218762631|gb|ACL05097.1| GTP-binding protein Era [Desulfatibacillum alkenivorans AK-01]
Length = 297
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 98/182 (53%), Gaps = 15/182 (8%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ KS +G+IGAPN GKS+++N M+G KV+ S K TT + +LGV+ + Q+ + DT
Sbjct: 3 ENFKSGFIGMIGAPNVGKSTLLNQMLGEKVSITSSKPQTTRNRILGVVHREKAQLVMLDT 62
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ KS + K V+ A + +++M V D + P+S ER+ +
Sbjct: 63 PGIHSAKSPLN----KHMVDVAMQCMGDVDLIMFVVDASK--PDPNS------ERLALKG 110
Query: 255 PPKQKR--VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
KQK +L +NK+DL+ KK+ LL + + + L ++ I S G ++ L L E
Sbjct: 111 LAKQKMPVILVLNKIDLI-KKETLLPLIAKLEPLADFKAIVPVSAETGEQVEELIAILEE 169
Query: 313 QF 314
Q
Sbjct: 170 QL 171
>gi|145356544|ref|XP_001422488.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582731|gb|ABP00805.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 351
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 95/182 (52%), Gaps = 18/182 (9%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
KS I+G PNAGKS+++N +VGTK++ V+ K TT H +LG+++ ++Q+ + DTPG
Sbjct: 48 HKSGYAAIVGRPNAGKSTLMNDLVGTKLSIVTYKPQTTRHRILGILSDENSQMVLLDTPG 107
Query: 197 LMLNK----SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGK 252
+M+ + G K V+ + +A +VL + D R P L + GK
Sbjct: 108 VMVEEFNKLDGMMLKSVRNSMANA-------DVLFYIVDAAR---DPYGAWEGLAPKKGK 157
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
+ P L +NK D+V ++ ++++ E F+ + + S L G + + ++ +E
Sbjct: 158 RVP----TALILNKCDMVGDRERIMELIEYFQAQEAIDEVLPISALNSTGTRNVKEWALE 213
Query: 313 QF 314
+
Sbjct: 214 RL 215
>gi|329850745|ref|ZP_08265590.1| GTP-binding protein Era [Asticcacaulis biprosthecum C19]
gi|328841060|gb|EGF90631.1| GTP-binding protein Era [Asticcacaulis biprosthecum C19]
Length = 317
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 95/184 (51%), Gaps = 16/184 (8%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIGAPNAGKS+++N +VGTKV+ V++K TT V G+ + Q+ + DTPG+ +
Sbjct: 11 VAIIGAPNAGKSTLVNQLVGTKVSIVTQKVQTTRFPVRGIALDEEVQMILVDTPGIFKPR 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHL----------TSPDSRVIRLIERMG 251
+ V SAW + ++++ D L T D + + +E +
Sbjct: 71 RRLD----RAMVASAWGGAEDADCVVLLVDAAAQLAVKGGGEVKATGADHKAVEDVEMIV 126
Query: 252 KQA-PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ +K +L +NK+DL+ K ++LL +A+ + E + M S KG G+K L + L
Sbjct: 127 EGLKSANRKAILALNKIDLM-KSENLLAIADDLYNTGIVEDVLMISAEKGHGVKDLKKLL 185
Query: 311 MEQF 314
++
Sbjct: 186 AKRM 189
>gi|50085654|ref|YP_047164.1| GTP-binding protein Era [Acinetobacter sp. ADP1]
gi|49531630|emb|CAG69342.1| GTP-binding protein,16S rRNA-binding, ribosome-associated GTPase
[Acinetobacter sp. ADP1]
Length = 345
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 92/171 (53%), Gaps = 10/171 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D +S V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ +Q DTP
Sbjct: 39 DFRSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVYVDTP 98
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D+H+ + D ++E++
Sbjct: 99 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVVDIHKWTQNDD----LVLEKLKNAEM 151
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
P +L +NKVD + KK LL + ++ L + I S L+GA L L
Sbjct: 152 PV---ILVINKVDTLEDKKSLLPLIQERTKLMNFAEIIPVSALRGANLDQL 199
>gi|225850199|ref|YP_002730433.1| GTP-binding protein Era [Persephonella marina EX-H1]
gi|225646733|gb|ACO04919.1| GTP-binding protein Era [Persephonella marina EX-H1]
Length = 305
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 89/170 (52%), Gaps = 11/170 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PN GKS+I+N ++GTK++ VS K TT +LGV D QI DTPG+ K
Sbjct: 12 VALIGRPNVGKSTIMNNILGTKLSIVSPKPQTTRMRILGVKHNKDAQIIFLDTPGIQKGK 71
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIR-LIERMGKQAPPKQKR 260
+ K VESA S++ +VL+++ + + T D +++ IE++ K
Sbjct: 72 DLLT----KTVVESAVSSMEEADVLVMIIEADKGWTKEDEQLLHNYIEKLNKPT------ 121
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+L +NK+D + K+ LL + E+ + I S +KG L Q L
Sbjct: 122 ILVINKIDKMKDKRLLLPLIEESAKKYNFVEIIPVSAIKGQNLDDFVQTL 171
>gi|303246793|ref|ZP_07333070.1| GTP-binding protein Era [Desulfovibrio fructosovorans JJ]
gi|302491810|gb|EFL51690.1| GTP-binding protein Era [Desulfovibrio fructosovorans JJ]
Length = 305
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 95/184 (51%), Gaps = 6/184 (3%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
E Q+ V ++G NAGKS+++N ++G KV+ VS K TT + + G++T+ D Q D
Sbjct: 2 ERAQRFGHVVMLGPTNAGKSTLLNRVIGQKVSIVSPKPQTTRNSISGILTEGDAQAVFLD 61
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPGL K G + + + SA++A+ +V++V+ D R+ PD+ L +
Sbjct: 62 TPGLHRQKRGIA----PLLLRSAYAALGQADVVLVLLDGARYARDPDALRADLRPVVQAL 117
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKV-AEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
K V+ +NK D V K +L V A + LPG E +F S L G G+ L L
Sbjct: 118 TNAKTPVVVALNKSDAVRDKARMLPVLAAIGEALPGAE-LFPVSALTGQGVAELLTALFA 176
Query: 313 QFKD 316
+ +
Sbjct: 177 RLPE 180
>gi|436840764|ref|YP_007325142.1| GTPase Era [Desulfovibrio hydrothermalis AM13 = DSM 14728]
gi|432169670|emb|CCO23041.1| GTPase Era [Desulfovibrio hydrothermalis AM13 = DSM 14728]
Length = 304
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 16/181 (8%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N+ +G KVA VS K TT + + G+++ D+Q+ DTPG+ +
Sbjct: 9 VALIGPPNAGKSTLMNHYLGQKVAIVSPKPQTTRNRISGILSNDDSQVVFLDTPGIHRMR 68
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPD------SRVIRLIERMGKQAP 255
K + ++SAW A+ ++++FD + P + +++ + G+
Sbjct: 69 G----KMNRFLLDSAWEALGSANAIVILFDAALYAAKPHLMEEELAPIVKPVNNSGRPI- 123
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFK 315
+ +NKVD V K LL V E+ + L F S LKG G L + ++++
Sbjct: 124 -----FVAVNKVDKVKDKARLLPVMEKAQELWPEADFFPVSALKGEGADVLLEKVIDKLP 178
Query: 316 D 316
+
Sbjct: 179 E 179
>gi|221484671|gb|EEE22965.1| GTP-binding protein era, putative [Toxoplasma gondii GT1]
Length = 413
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 104/225 (46%), Gaps = 49/225 (21%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS+ + +IG PNAGKSS++N ++G K++AVS K NTT E+ G++T+ DTQ+ D PG+
Sbjct: 76 KSLRIALIGPPNAGKSSLLNALLGQKLSAVSPKVNTTRSEIRGIITQDDTQLVFLDVPGI 135
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVI-------RLIERM 250
+ +S + K + V +AW +V ++V D + T ++ LI R
Sbjct: 136 V--ESHRNKKFCRELVSTAWRGFEDADVALLVIDAVKRPTQEVFNIVTTIAPKPSLIRRA 193
Query: 251 -------------------------------------GKQAPPKQKRV---LCMNKVDLV 270
GKQ + + LC+NKVDL
Sbjct: 194 FDSTLATTPSPITQTEVGDAVGLPAHRQGKDLDEVDEGKQIDVNARGIPVFLCINKVDLA 253
Query: 271 TKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFK 315
+ K + A++F+ +E+IF S GL+ L +L+ + K
Sbjct: 254 SHPKWVYARAKEFQAHGHFEKIFHLSAKNSRGLQPLLDHLVSRAK 298
>gi|237839985|ref|XP_002369290.1| hypothetical protein TGME49_086640 [Toxoplasma gondii ME49]
gi|211966954|gb|EEB02150.1| hypothetical protein TGME49_086640 [Toxoplasma gondii ME49]
Length = 413
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 104/225 (46%), Gaps = 49/225 (21%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS+ + +IG PNAGKSS++N ++G K++AVS K NTT E+ G++T+ DTQ+ D PG+
Sbjct: 76 KSLRIALIGPPNAGKSSLLNALLGQKLSAVSPKVNTTRSEIRGIITQDDTQLVFLDVPGI 135
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVI-------RLIERM 250
+ +S + K + V +AW +V ++V D + T ++ LI R
Sbjct: 136 V--ESHRNKKFCRELVSTAWRGFEDADVALLVIDAVKRPTQEVFNIVTTIAPKPSLIRRA 193
Query: 251 -------------------------------------GKQAPPKQKRV---LCMNKVDLV 270
GKQ + + LC+NKVDL
Sbjct: 194 FDSTLATTPSPITQTEVGDAVGLPAHRQGKDLDEVDDGKQIDVNARGIPVFLCINKVDLA 253
Query: 271 TKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFK 315
+ K + A++F+ +E+IF S GL+ L +L+ + K
Sbjct: 254 SHPKWVYARAKEFQAHGHFEKIFHLSAKNSRGLQPLLDHLVSRAK 298
>gi|221504855|gb|EEE30520.1| GTP-binding protein erg, putative [Toxoplasma gondii VEG]
Length = 413
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 104/225 (46%), Gaps = 49/225 (21%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS+ + +IG PNAGKSS++N ++G K++AVS K NTT E+ G++T+ DTQ+ D PG+
Sbjct: 76 KSLRIALIGPPNAGKSSLLNALLGQKLSAVSPKVNTTRSEIRGIITQDDTQLVFLDVPGI 135
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVI-------RLIERM 250
+ +S + K + V +AW +V ++V D + T ++ LI R
Sbjct: 136 V--ESHRNKKFCRELVSTAWRGFEDADVALLVIDAVKRPTQEVFNIVTTIAPKPSLIRRA 193
Query: 251 -------------------------------------GKQAPPKQKRV---LCMNKVDLV 270
GKQ + + LC+NKVDL
Sbjct: 194 FDSTLATTPSPITQTEVGDAVGLPAHRQGKDLDEVDDGKQIDVNARGIPVFLCINKVDLA 253
Query: 271 TKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFK 315
+ K + A++F+ +E+IF S GL+ L +L+ + K
Sbjct: 254 SHPKWVYARAKEFQAHGHFEKIFHLSAKNSRGLQPLLDHLVSRAK 298
>gi|260892064|ref|YP_003238161.1| GTP-binding protein Era [Ammonifex degensii KC4]
gi|260864205|gb|ACX51311.1| GTP-binding protein Era [Ammonifex degensii KC4]
Length = 300
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 99/181 (54%), Gaps = 11/181 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
E++ +S V ++G PN GKS++IN++VG KVA VS K TT H +LGV+T + QI D
Sbjct: 3 EKEYRSGFVSVVGRPNVGKSTLINHLVGQKVAIVSDKPQTTRHRILGVLTLPEAQIVFVD 62
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG+ + H+ + V A A+ ++++ + + + P + ++E++ K
Sbjct: 63 TPGIHKPR----HRLGEYLVTLALGALKGVDLVLFLSEA---TSPPGAGDYFILEQLKKA 115
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
P +L +NK+DL++K + LL + + ++ + I S L G L+ L Q ++E
Sbjct: 116 EVPV---ILVLNKIDLISKPR-LLPLIDLWRQEHDFAAIVPVSALTGENLERLVQEIVEH 171
Query: 314 F 314
Sbjct: 172 L 172
>gi|116872893|ref|YP_849674.1| GTP-binding protein Era [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123461073|sp|A0AIR3.1|ERA_LISW6 RecName: Full=GTPase Era
gi|116741771|emb|CAK20895.1| GTP-binding protein Era [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 301
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 95/174 (54%), Gaps = 17/174 (9%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N+++G K+A +S K TT ++V GV T ++QI DTPG
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPG- 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFE---VLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
++K + D V++ A+N F+ ++ V D D +I ++ + Q
Sbjct: 65 -IHKPKHKLGDFMVKI-----ALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNV--QT 116
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
P L +NK+DL++ +DL K+ EQ++ L +E I S L+G + L +
Sbjct: 117 P----VFLLINKIDLIS-PEDLFKLIEQYRELLDFEEIIPISALQGNNVPNLLE 165
>gi|301617385|ref|XP_002938122.1| PREDICTED: GTP-binding protein era homolog [Xenopus (Silurana)
tropicalis]
Length = 445
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 86/150 (57%), Gaps = 7/150 (4%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ K + + IIG+PNAGKS++ N ++G KV VS+K +TT + GV+T+ +TQ+ + DTP
Sbjct: 94 NAKILRIAIIGSPNAGKSTLSNQLLGRKVFPVSKKVHTTRCQAQGVITEGETQLVLLDTP 153
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLT--SPDSRVIRLIERMGKQ 253
G++ H K + W ++ ++++V+ DV H T S + V++ + + Q
Sbjct: 154 GMVTTSKVKRHNLEKSLLHDPWQSMKSADLVLVLLDVSDHWTRSSLNFEVLKCLSQF--Q 211
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQF 283
P +L +NKVDL+ +K LL + Q
Sbjct: 212 NIPS---ILVLNKVDLIKQKGILLDLTNQL 238
>gi|148259271|ref|YP_001233398.1| GTP-binding protein Era [Acidiphilium cryptum JF-5]
gi|146400952|gb|ABQ29479.1| tRNA modification GTPase trmE [Acidiphilium cryptum JF-5]
Length = 295
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++G PNAGKS+++N +G KV+ V+ K TT + G++ + QI + DTPG+ K
Sbjct: 8 VALLGRPNAGKSTLLNQAIGAKVSIVTPKAQTTRFRISGIVMRGGDQIVLVDTPGIFAPK 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW V ++ ++ D + PD L E + A + R
Sbjct: 68 RRLD----RAMVAAAWEGVAGADLACLIVDAAK--ADPDD----LAEPIEALAATGRPRW 117
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+DL+ + K LL +AE G+ +FM S LK G+ L L
Sbjct: 118 LILNKIDLLPRDK-LLPLAETLARQGGFAEVFMISALKRDGVDRLLDAL 165
>gi|148284268|ref|YP_001248358.1| GTP-binding protein Era [Orientia tsutsugamushi str. Boryong]
gi|146739707|emb|CAM79520.1| GTP-binding protein [Orientia tsutsugamushi str. Boryong]
Length = 306
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 96/177 (54%), Gaps = 12/177 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
++ QK++ V I+G PN+GKS+++N ++G K++ V+ K TT + G++T TQ+ D
Sbjct: 9 DKQQKTMVVSILGMPNSGKSTLLNRLIGQKISIVTPKVQTTRSAITGIVTYNLTQLIFID 68
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG+ K K V AW+++ ++ +++ D+ + L + ++ ++ R+ Q
Sbjct: 69 TPGIFQPKKTLE----KAMVRCAWTSIVGADIALLIIDITKKL---NEQIQIILTRLISQ 121
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K K + +NK+D+ +L ++ K L +I S L G G++ L QY+
Sbjct: 122 ---KIKFCIILNKIDI--GLNNLTQLMNDLKQLSINAKIIAISALNGNGVQELLQYI 173
>gi|258404222|ref|YP_003196964.1| GTP-binding protein Era [Desulfohalobium retbaense DSM 5692]
gi|257796449|gb|ACV67386.1| GTP-binding protein Era [Desulfohalobium retbaense DSM 5692]
Length = 312
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 90/168 (53%), Gaps = 14/168 (8%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V IIG PNAGKS+++N +G KVA VS K TT +++ G+++ + Q+ DTPG
Sbjct: 15 RSGLVAIIGPPNAGKSTLLNQFLGQKVAIVSPKPQTTRNQISGILSTDEAQVVFLDTPG- 73
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSP-----DSRVIRLIERMGK 252
++KSG + V++AW A+ E +++V D +L P D+ ++R +R+ +
Sbjct: 74 -VHKSGQRFN--RYMVDAAWRALTASEAVLLVLDAGLYLARPQLLERDTSLMR--KRVQQ 128
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKG 300
P L +NK D + K LL + ++ L + S L+G
Sbjct: 129 SGNPV---FLALNKTDTIKDKSRLLPLLQRLSELWPEAELHPISALRG 173
>gi|182679392|ref|YP_001833538.1| GTP-binding protein Era [Beijerinckia indica subsp. indica ATCC
9039]
gi|182635275|gb|ACB96049.1| GTP-binding protein Era [Beijerinckia indica subsp. indica ATCC
9039]
Length = 316
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 91/175 (52%), Gaps = 11/175 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPNAGKS++IN +VG K++ VSRK TT V G+ T+ +QI DTPG+ K
Sbjct: 13 VALIGAPNAGKSTLINRLVGAKISIVSRKVQTTRCLVRGIATEGASQIIFVDTPGIFAPK 72
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW +V+ ++ D + + D V ++ ++ + + K++
Sbjct: 73 RRLD----QAMVTSAWGGAGDADVVALLVDARKGI---DEEVEAILAKLPQV---RAKKL 122
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
L +NK+D + + L A+ + + FM S L+G G+ L L E K+
Sbjct: 123 LVLNKIDTIEPPRLLALAADLNARI-DFSETFMISALRGHGVDKLKNLLGEMMKE 176
>gi|51245541|ref|YP_065425.1| GTP-binding protein Era-like protein [Desulfotalea psychrophila
LSv54]
gi|50876578|emb|CAG36418.1| probable GTP-binding protein Era homolog [Desulfotalea psychrophila
LSv54]
Length = 313
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PNAGKS+++N ++G K++ V+ K TT + +LG++ QI + DTP
Sbjct: 16 DVKSGMVAIVGPPNAGKSTLMNQLLGQKISIVTSKPQTTRNRILGIVNDDAYQIVLLDTP 75
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM-GKQA 254
GL + + ++V +ES L EV V+F V L P + + E + G
Sbjct: 76 GLHKADEPLNIEMMRVALES------LSEVDAVLFLVDVSLPLPPKALAKQREELAGYME 129
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
+ +L +NKVDL+ K+K LL + E + L ++ + S L G G L + ++E
Sbjct: 130 KIESPAILVLNKVDLIDKQK-LLPMIESYAKLFPFKAVVPISALNGDGADNLLKEILE 186
>gi|149913471|ref|ZP_01902004.1| GTP-binding protein Era [Roseobacter sp. AzwK-3b]
gi|149812591|gb|EDM72420.1| GTP-binding protein Era [Roseobacter sp. AzwK-3b]
Length = 302
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 94/172 (54%), Gaps = 9/172 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ +IG PNAGKS+++N MVG KV+ V+ K TT + GV + ++Q+ DTPGL +
Sbjct: 8 IALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGESQLVFVDTPGLFQPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW +V++++ + HR +T R++ ++ +GK +
Sbjct: 68 RRLD----RAMVAAAWGGAADADVIVLLIEAHRGITEGVERILERLQDVGK----GRTVA 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
L +NK+D V K + LL++ + + + FM S +G G++ L ++L EQ
Sbjct: 120 LAINKIDRV-KSEALLRLTQDLNARFSFAKTFMISAERGHGVEDLRKWLAEQ 170
>gi|329894312|ref|ZP_08270182.1| GTP-binding protein Era [gamma proteobacterium IMCC3088]
gi|328923108|gb|EGG30431.1| GTP-binding protein Era [gamma proteobacterium IMCC3088]
Length = 300
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
E +KS V I+G PN GKS+++N+++G K++ SRK TT H +LG+ T+ D Q+ D
Sbjct: 3 ESIKKSAIVAIVGRPNVGKSTLLNHILGQKISITSRKPQTTRHTLLGIHTEGDFQLVFVD 62
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG+ S + + +A A+ +++ ++ D H + D RV + ++R
Sbjct: 63 TPGI---HSEHKKALNEYMNHAATQAMADTDIICMIVD-RTHWNADDERVFKHVKRH--- 115
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
K VL +NKVDL+ K LL E+ G + I S + ++ L Q L++
Sbjct: 116 ---SAKLVLVVNKVDLLNDKGRLLPYLEELYQKSGADEIVPVSAFTPSDVQRLVQALVK 171
>gi|315282359|ref|ZP_07870786.1| GTP-binding protein Era [Listeria marthii FSL S4-120]
gi|313613991|gb|EFR87708.1| GTP-binding protein Era [Listeria marthii FSL S4-120]
Length = 301
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 94/174 (54%), Gaps = 17/174 (9%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N+++G K+A +S K TT ++V GV T ++QI DTPG
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPG- 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFE---VLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
++K + D V++ A+N F+ ++ V D D +I ++ + Q
Sbjct: 65 -IHKPKHKLGDFMVKI-----ALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNV--QT 116
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
P L +NK+DL+ +DL K+ EQ++ L +E I S L+G + L +
Sbjct: 117 P----VFLLINKIDLIA-PEDLFKLIEQYRELMDFEEIIPISALQGNNVPNLLE 165
>gi|114765527|ref|ZP_01444635.1| GTP-binding protein Era [Pelagibaca bermudensis HTCC2601]
gi|114542120|gb|EAU45152.1| GTP-binding protein Era [Roseovarius sp. HTCC2601]
Length = 301
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 9/169 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS++ N MVG KV+ V+ K TT + GV + D+Q+ DTPGL +
Sbjct: 8 VALIGEPNAGKSTLTNRMVGAKVSIVTHKVQTTRARIRGVAMEGDSQLVFVDTPGLFKPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW ++++++ + HR +T R++ + + P +
Sbjct: 68 RRLD----RAMVAAAWGGAADADIIVLLVEAHRGITEGVERILEGLADL----PQGRTVA 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V + K LLK+ E + + FM S KG G+K L ++L
Sbjct: 120 LAINKIDRV-EAKVLLKLTEDLNERYAFAKTFMISAEKGHGVKDLREWL 167
>gi|386813446|ref|ZP_10100670.1| GTP-binding protein Era [planctomycete KSU-1]
gi|386402943|dbj|GAB63551.1| GTP-binding protein Era [planctomycete KSU-1]
Length = 299
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 104/186 (55%), Gaps = 15/186 (8%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
E+ +++ KS V IIG PN GKS++IN ++G K++ V+ K TT +++GV+TK D QI
Sbjct: 2 ELNKKNFKSGYVAIIGKPNVGKSTLINDLLGCKLSIVTPKPQTTRKKIMGVLTKEDYQII 61
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM 250
+DTPG++ + Y + V+ +A+S + +V++++ + + T D V++ + ++
Sbjct: 62 FYDTPGII--EPRYELQTYMVK--TAYSVIEDVDVILLMVEPCKPSTDKDREVLKKLSQV 117
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKAL 306
AP +L +NKVDLV +K L+ + + + I S LKG L +
Sbjct: 118 --NAP----VILAVNKVDLV-EKDSLIPIISAYDAQLKFAEIVPISALKGVNIDLMLSLI 170
Query: 307 TQYLME 312
+YL E
Sbjct: 171 VKYLPE 176
>gi|347733214|ref|ZP_08866279.1| GTP-binding protein Era [Desulfovibrio sp. A2]
gi|347518241|gb|EGY25421.1| GTP-binding protein Era [Desulfovibrio sp. A2]
Length = 307
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 91/169 (53%), Gaps = 4/169 (2%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++G PNAGKS+++N +G KVA V+ + TT ++++G++++ D Q+ DTPG+ +
Sbjct: 11 VALLGPPNAGKSTLLNSALGHKVAIVTPRAQTTRNQIVGILSEPDAQVIFMDTPGIHQQR 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ K+ +++AW +++ +V++V+ D ++ PD + M A + +
Sbjct: 71 GRMN----KILLQTAWQSMHSADVILVMLDADLYIKKPDFLENDVKPLMDAVASEDRPVI 126
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ +NKVDL K +L + + + +F S L GL L + L
Sbjct: 127 VAVNKVDLFRDKSKMLPLFIDLQKMWPKAEVFPVSALTRDGLPELVKLL 175
>gi|332375296|gb|AEE62789.1| unknown [Dendroctonus ponderosae]
Length = 357
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 47/215 (21%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D + + VGI+G PN+GKS+IIN+++ K S K +TT + ++T DTQI DTP
Sbjct: 42 DTRLLKVGIMGVPNSGKSTIINHLMDRKACPTSSKVHTTRSAAMAIITLGDTQIVFLDTP 101
Query: 196 GLM-------LNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSP--DSRVIRL 246
GL+ N KD K + A +++ V+ DV T D ++I L
Sbjct: 102 GLINENEKKRFNLENSFLKDSKRALREA-------DIVGVIHDVSNSHTRDRLDIKIINL 154
Query: 247 IERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQF-------KHLPGYER-------- 291
+E K P +L +NK+D++ K+ LL + K +PG+++
Sbjct: 155 LES-NKDKP----SILILNKIDMLKSKRKLLDITRLLTDNCVDGKPIPGHQQHSIKLQFE 209
Query: 292 -----------IFMTSGLKGAGLKALTQYLMEQFK 315
IFM S L G GL + +YL+++ K
Sbjct: 210 KETKAWPYFKDIFMVSALTGDGLPEVKKYLVDKSK 244
>gi|114770107|ref|ZP_01447645.1| GTP-binding protein Era [Rhodobacterales bacterium HTCC2255]
gi|114548944|gb|EAU51827.1| GTP-binding protein Era [alpha proteobacterium HTCC2255]
Length = 303
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 92/169 (54%), Gaps = 8/169 (4%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N +VG KV+ V+ K TT + G+ + ++Q+ DTPGL +
Sbjct: 9 VALIGEPNAGKSTLMNRIVGAKVSIVTHKVQTTRARIRGIAMQENSQLVFVDTPGLFKTR 68
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
K K V +AWS ++++++ + HR +T V ++E + K+ Q+ +
Sbjct: 69 ----RKLDKAMVAAAWSGAADADIVVLIVEAHRGITDG---VEMILEGLEKRDVKGQRLI 121
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D + K LL + + +E FM S KG G+K L +L
Sbjct: 122 LAINKIDKI-KSDALLSLTQSLNQRLNFEETFMISAEKGYGVKVLQDWL 169
>gi|254476279|ref|ZP_05089665.1| GTP-binding protein Era [Ruegeria sp. R11]
gi|214030522|gb|EEB71357.1| GTP-binding protein Era [Ruegeria sp. R11]
Length = 301
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N MVG KV+ V+ K TT + GV + D+QI DTPGL +
Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGDSQIVFVDTPGLFRPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW +V++++ + HR +T R++ ++ +G+ ++
Sbjct: 68 RRLD----RAMVAAAWGGAADADVVVLMVEAHRGITEGVERILEGLQDIGE----GRRIA 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+D V + + LL + + + FM S +G G+ AL Q+L ++
Sbjct: 120 LAINKIDRV-QSEVLLGLTKDLNERYDFSETFMISAERGHGVDALRQWLAQEL 171
>gi|260771921|ref|ZP_05880839.1| GTP-binding protein Era [Vibrio metschnikovii CIP 69.14]
gi|260613213|gb|EEX38414.1| GTP-binding protein Era [Vibrio metschnikovii CIP 69.14]
Length = 321
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 10/175 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+Q + I+G PN GKS+++N ++G K++ SRK TT H ++GV TK D Q DTP
Sbjct: 24 NQHCGFIAIVGRPNVGKSTLLNNILGQKISITSRKPQTTRHRIMGVDTKGDYQAVYVDTP 83
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
GL + + ++ + S+ S VNL VL VV H T+ D V + K
Sbjct: 84 GLHIEEKRAINRLMNRAASSSLSDVNL--VLFVVDGT--HWTADDEMV------LNKLRQ 133
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
VLC+NKVD V + D+++ + L + I S G + L Q++
Sbjct: 134 ANFPVVLCINKVDNVKDRNDVMRHMQDLSSLMNFVDIVPISAKLGKNIDVLHQHV 188
>gi|365873592|ref|ZP_09413125.1| GTP-binding protein Era [Thermanaerovibrio velox DSM 12556]
gi|363983679|gb|EHM09886.1| GTP-binding protein Era [Thermanaerovibrio velox DSM 12556]
Length = 304
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 89/176 (50%), Gaps = 15/176 (8%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
++ ++ V ++G PN GKSS+IN +VG KV AVS K TT H + G++ QI + D
Sbjct: 3 QDPYRAGCVALLGRPNVGKSSLINALVGEKVMAVSPKVQTTRHAIRGIVNGEGYQIVLVD 62
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHR---HLTSPDSRVIRLIERM 250
TPG+ + H + + +A L EV + F V +++ D RV+ I
Sbjct: 63 TPGVHEPR----HDLGRFMISQIRAA--LEEVCGICFVVDATCDRVSAMDERVLEWICEA 116
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
G+ A LC+NKVDL+ +K D V F+ G++ + S ++G L L
Sbjct: 117 GRPA------ALCVNKVDLLKRKDDFWDVVALFQDRYGFDAVVPVSAVQGTNLDVL 166
>gi|167749633|ref|ZP_02421760.1| hypothetical protein EUBSIR_00591 [Eubacterium siraeum DSM 15702]
gi|167657386|gb|EDS01516.1| ribosome biogenesis GTPase Era [Eubacterium siraeum DSM 15702]
gi|291530788|emb|CBK96373.1| GTP-binding protein Era [Eubacterium siraeum 70/3]
gi|291557707|emb|CBL34824.1| GTP-binding protein Era [Eubacterium siraeum V10Sc8a]
Length = 302
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KSV V I G PNAGKS++ NY+VG K+A VS K TT + GV+TK +TQ DTPG+
Sbjct: 5 KSVFVAIAGRPNAGKSTLTNYLVGEKIAIVSDKPQTTRTRINGVLTKGETQYVFIDTPGM 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ S + +K S +V +V++++ D + ++ + +I + K
Sbjct: 65 HKAKNKLSDQMLK----SIRESVTDVDVILMMADATKKISPIEHNLIDSFKDR------K 114
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
VL +NKVDLV K +LL + +++ L ++ I S + G++ +
Sbjct: 115 TDVVLLINKVDLVKDKSELLSLIKEYSELYDFKEIIPISVRQRIGVEEI 163
>gi|424780584|ref|ZP_18207457.1| GTP-binding protein Era [Catellicoccus marimammalium M35/04/3]
gi|422842986|gb|EKU27433.1| GTP-binding protein Era [Catellicoccus marimammalium M35/04/3]
Length = 299
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 95/183 (51%), Gaps = 19/183 (10%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V +IG PN GKS+++N +VG KVA +S K TT +++ GV T D QI DTP
Sbjct: 3 EHKSGFVALIGRPNVGKSTLLNRIVGQKVAIMSDKAQTTRNKIQGVYTTEDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIR----LIERMG 251
G+ KS VESA+SA L EV + F L S D ++ R +IER+
Sbjct: 63 GIHKPKSRLG----DFMVESAYSA--LHEVDAICF-----LVSADQKMGRGDEFIIERLR 111
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
K P L +NK+D V DLL + EQ+ ++ + S +G + L + L+
Sbjct: 112 KVDTPV---YLVINKIDKV-HPNDLLPLIEQYMAAYPFKAVIPISATQGNNVDELLKTLV 167
Query: 312 EQF 314
E+
Sbjct: 168 EEL 170
>gi|294011701|ref|YP_003545161.1| GTP-binding protein Era [Sphingobium japonicum UT26S]
gi|292675031|dbj|BAI96549.1| GTP-binding protein Era [Sphingobium japonicum UT26S]
Length = 302
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 11/173 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
E Q + I+GAPNAGKS+++N +VG KVA S K TT V+GV + D Q+ + D
Sbjct: 5 EVQQHCGVIAIVGAPNAGKSTLVNALVGQKVAITSPKAQTTRTRVMGVAIEGDAQMVLVD 64
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG+ K + V++AW +++ +V D L + ++ G
Sbjct: 65 TPGIFQPKRRLD----RAMVQAAWGGAQGADLIALVVDGKAGLGAKMEPIV------GAL 114
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
A +K+ L +NKVD+ K+K L+ ++ L E F+++ G GL L
Sbjct: 115 AARPEKKWLILNKVDIAIKEKLLVHTQRLYEQLDIAETFFVSAA-TGDGLPEL 166
>gi|255320779|ref|ZP_05361954.1| GTP-binding protein Era [Acinetobacter radioresistens SK82]
gi|262379445|ref|ZP_06072601.1| GTP-binding protein Era [Acinetobacter radioresistens SH164]
gi|421465570|ref|ZP_15914257.1| GTP-binding protein Era [Acinetobacter radioresistens WC-A-157]
gi|255302156|gb|EET81398.1| GTP-binding protein Era [Acinetobacter radioresistens SK82]
gi|262298902|gb|EEY86815.1| GTP-binding protein Era [Acinetobacter radioresistens SH164]
gi|400203837|gb|EJO34822.1| GTP-binding protein Era [Acinetobacter radioresistens WC-A-157]
Length = 342
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 93/171 (54%), Gaps = 10/171 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ +Q DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKSQAVYVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D H+ + D ++E++
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVVDAHKWTQNDD----LVLEKLKNAEM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
P +L +NK+D + +K+ LL + ++ L + I S L+GA L+ L
Sbjct: 149 PV---ILVINKIDTIEEKRTLLPLIQERTKLMNFVEIVPVSALRGANLEHL 196
>gi|366089214|ref|ZP_09455687.1| GTPase Era [Lactobacillus acidipiscis KCTC 13900]
Length = 300
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 90/170 (52%), Gaps = 11/170 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIG PN GKS+ +NY++G K+A +S K TT +++ G+ T D+QI DTPG+ +
Sbjct: 10 VAIIGRPNVGKSTFLNYVIGQKIAIMSDKPQTTRNKIQGIYTTDDSQIIFIDTPGIHKPQ 69
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S V+SA S +N + ++ + + + D +I+ ++ + K+
Sbjct: 70 SKLG----DFMVDSALSTLNEVDAVLFMVNATQKRGKGDDFIIKRLQNV------KKPIY 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
L +NK+D + D+L + + ++H ++ ++ S LKG + L L+
Sbjct: 120 LVINKIDQI-HPNDILPIVDDYRHALDFQEVYPISALKGNNVFELVDNLV 168
>gi|377809673|ref|YP_005004894.1| GTP-binding protein Era [Pediococcus claussenii ATCC BAA-344]
gi|361056414|gb|AEV95218.1| GTP-binding protein Era [Pediococcus claussenii ATCC BAA-344]
Length = 302
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 93/179 (51%), Gaps = 14/179 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V I+G PN GKS+ +NY+VG KVA +S TT +++ GV T QI DTPG+
Sbjct: 7 RSGFVAIVGRPNVGKSTFLNYVVGQKVAIMSDVPQTTRNKIQGVYTNDQEQIIFIDTPGI 66
Query: 198 --MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
NK G V+SA S++N + +M + + + + D+ + IER+ K
Sbjct: 67 HKAHNKLG------DFMVQSAMSSLNEVDAVMFMVNADQRRGAGDNFI---IERLKKIT- 116
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
+ L +NK+DLV DL ++ E +K ++ IF S L+G + L L ++
Sbjct: 117 -DKPIYLVINKIDLV-HPDDLFEIVESYKDALSWKEIFPISALQGNNINELINSLGQEL 173
>gi|338708658|ref|YP_004662859.1| GTP-binding protein Era [Zymomonas mobilis subsp. pomaceae ATCC
29192]
gi|336295462|gb|AEI38569.1| GTP-binding protein Era [Zymomonas mobilis subsp. pomaceae ATCC
29192]
Length = 307
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 11/177 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
E +Q V I+GAPNAGKS+++N +VG K+A +S K TT ++G+ TQI + D
Sbjct: 10 ETEQHCGLVAIVGAPNAGKSTLVNALVGQKIAIISPKAQTTRTRLMGIALAGQTQILLID 69
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG+ + + + V +AW +++ +V D +T R LIE + +
Sbjct: 70 TPGIFTPRKRFD----RAMVAAAWGGAEGADLVALVIDATSGIT---RRTEPLIEALKAR 122
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ PK ++ +NKVD +T K +LL +A++ + +FM S G G+ L Q L
Sbjct: 123 SEPK---IVILNKVD-ITPKAELLALAQKLYTELEPKELFMVSATTGDGIDDLRQAL 175
>gi|197105332|ref|YP_002130709.1| GTP-binding protein Era [Phenylobacterium zucineum HLK1]
gi|196478752|gb|ACG78280.1| GTP-binding protein Era [Phenylobacterium zucineum HLK1]
Length = 326
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 14/179 (7%)
Query: 144 IIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSG 203
IIGAPNAGKS++ N +VG KV+ V++K TT V GV D QI + DTPG+ +
Sbjct: 25 IIGAPNAGKSTLTNRLVGAKVSIVTQKVQTTRFPVRGVAIAGDAQIVLVDTPGIFQPRRR 84
Query: 204 YSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTS-PDSR-----VIRLIERMGKQAPPK 257
+ V +AW + ++ + D L P R V ++E + K
Sbjct: 85 LD----RAMVRAAWGGAEDADAVVHLVDAAAQLGDKPADRKAQADVDSIVEGLKKSG--- 137
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
+K +L +NK+D V K++ LL +++ Y+ +FM S G+G++ L L D
Sbjct: 138 RKVILALNKIDAV-KREALLDISKTLFDTGVYDEVFMVSATSGSGVEDLKARLAALMPD 195
>gi|405380037|ref|ZP_11033881.1| GTP-binding protein Era [Rhizobium sp. CF142]
gi|397323442|gb|EJJ27836.1| GTP-binding protein Era [Rhizobium sp. CF142]
Length = 312
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N +VG KV+ VS K TT V G+ + QI DTPG+ +
Sbjct: 23 VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAIVRGIAIHNNAQIVFMDTPGIFKPR 82
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW +++M++ D R L ++ + K P Q+++
Sbjct: 83 RRLD----RAMVTSAWGGAKDADLIMLLIDSERGLRGDAEAILEGL----KDVP--QRKI 132
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V ++ LL +A +E+ FM S G+G + YL
Sbjct: 133 LVLNKIDRVNREL-LLAIAATANQKVDFEQTFMISAENGSGCDDVMDYL 180
>gi|428202143|ref|YP_007080732.1| GTP-binding protein Era [Pleurocapsa sp. PCC 7327]
gi|427979575|gb|AFY77175.1| GTP-binding protein Era [Pleurocapsa sp. PCC 7327]
Length = 316
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 94/177 (53%), Gaps = 14/177 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS VGIIG PN GKS+++N++VG KVA VS TT + + G++T QI DTPG
Sbjct: 23 KSGFVGIIGRPNVGKSTLMNHLVGHKVAIVSPVAQTTRNRLQGILTTEKAQIIFVDTPG- 81
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
++K H+ KV V++A +A+N +V++ V D D ++ L+E+ K
Sbjct: 82 -IHKP--HHELGKVLVKNAINAINSVDVVLFVVDSSVEAGGGDRYIVELLEKT------K 132
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYE--RIFMTSGLKGAGLKALTQYLME 312
+L +NK DL + D + E + L ++ S L GAGL+ L L++
Sbjct: 133 TPVILGLNKADL--QPSDYRAIDESYTCLAESHNWKVAKFSALTGAGLETLQNLLVD 187
>gi|88797949|ref|ZP_01113536.1| GTP-binding protein Era [Reinekea blandensis MED297]
gi|88779146|gb|EAR10334.1| GTP-binding protein Era [Reinekea sp. MED297]
Length = 302
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 93/170 (54%), Gaps = 12/170 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N+++G K++ SRK TT H++LG+ T+ TQ+ DTPG+ +
Sbjct: 14 VAIVGRPNVGKSTLMNHLLGQKISITSRKPQTTRHQILGIWTEDKTQMVFVDTPGMHRGQ 73
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHL-TSPDSRVIRLIERMGKQAPPKQKR 260
++ + ++A L ++ V+F V R + T D+ V+ ++R +AP
Sbjct: 74 EKAINRAMNKAADTA-----LTDIDAVIFVVDRTVFTDEDAWVLEKLKR--SRAPV---- 122
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+L +NKVD + K+ LL E ++ + S L+G L LT+ L
Sbjct: 123 ILVINKVDQLDDKQSLLPHIEAMSEKFAFKEVIPVSALQGHNLDRLTESL 172
>gi|156381162|ref|XP_001632135.1| predicted protein [Nematostella vectensis]
gi|156219186|gb|EDO40072.1| predicted protein [Nematostella vectensis]
Length = 383
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 23/193 (11%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D K + V IIG PN+GKS++IN +VG K+ AV+ K +TT GV T TQI + DTP
Sbjct: 77 DTKLLKVAIIGEPNSGKSTLINQLVGEKIVAVTEKPHTTRQVSRGVFTSGGTQIILLDTP 136
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
GL+ G K + +++ A++ +++ V+ D + + R I + QA
Sbjct: 137 GLVTQSEGKRLKMTREHIKAPGDALDDADIIGVICD------ASNKRTRDRIHQQVLQAL 190
Query: 256 PKQKRV---LCMNKVDLVTKKKDLLKVAEQFKHLPG--------------YERIFMTSGL 298
+ + L +NK+D + K DLL +A + G ++ +FM S
Sbjct: 191 EQHVNIPSFLILNKIDKLRHKVDLLVLAAELSKDRGRDEWGYTETGGWSEFDNVFMVSAR 250
Query: 299 KGAGLKALTQYLM 311
G G++ L +YL+
Sbjct: 251 LGNGVQDLREYLV 263
>gi|341583384|ref|YP_004763875.1| GTPase Era [Rickettsia heilongjiangensis 054]
gi|340807610|gb|AEK74198.1| GTPase Era [Rickettsia heilongjiangensis 054]
Length = 344
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 100/184 (54%), Gaps = 14/184 (7%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
K +QK+V+V IIG PN+GKS+++N ++G K++ V++K TT + G++T DTQ+ ++
Sbjct: 51 KTSNQKTVSVCIIGRPNSGKSTLLNRIIGEKLSIVTQKVQTTRSIITGIITLKDTQVILY 110
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM-G 251
DTPG+ K K V AWS+++ ++++++ D L S D +++++
Sbjct: 111 DTPGIFEPKGSLE----KAMVRCAWSSLHSADLVLLIID---SLKSFDDITHNILDKLRS 163
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
P + +NK+D+ +K + +K H P +F S L G + L +Y+
Sbjct: 164 LNIVP----IFLLNKIDIESKYLNDIKAFLTENH-PD-SLLFPISALSGKNIDGLLEYIT 217
Query: 312 EQFK 315
+ K
Sbjct: 218 SKAK 221
>gi|91205994|ref|YP_538349.1| GTP-binding protein Era [Rickettsia bellii RML369-C]
gi|122425285|sp|Q1RHA4.1|ERA_RICBR RecName: Full=GTPase Era
gi|91069538|gb|ABE05260.1| GTP-binding protein Era [Rickettsia bellii RML369-C]
Length = 295
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 97/181 (53%), Gaps = 16/181 (8%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQI ++DTPG
Sbjct: 6 QKTVSVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLNDTQIILYDTPG 65
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ K K V AWS+++ +++M++ D + L S ++ + + P
Sbjct: 66 IFEPKGTLE----KAMVRCAWSSLHSADIVMLIIDSLKPLDSITHDILNKLRSLN-VVP- 119
Query: 257 KQKRVLCMNKVDLVTKKKDLLK--VAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
V +NK+D+ +K D K +AE + +F S + G + L +Y+ +
Sbjct: 120 ----VFLLNKIDVESKYIDDTKAFLAENYSD----SLLFPISAISGENVDKLLEYITSKA 171
Query: 315 K 315
K
Sbjct: 172 K 172
>gi|157826642|ref|YP_001495706.1| GTP-binding protein Era [Rickettsia bellii OSU 85-389]
gi|189037663|sp|A8GUZ8.1|ERA_RICB8 RecName: Full=GTPase Era
gi|157801946|gb|ABV78669.1| GTP-binding protein Era [Rickettsia bellii OSU 85-389]
Length = 295
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 97/181 (53%), Gaps = 16/181 (8%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQI ++DTPG
Sbjct: 6 QKTVSVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLNDTQIILYDTPG 65
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ K K V AWS+++ +++M++ D + L S ++ + + P
Sbjct: 66 IFEPKGTLE----KAMVRCAWSSLHSADIVMLIIDSLKPLDSITHDILNKLRSLN-VVP- 119
Query: 257 KQKRVLCMNKVDLVTKKKDLLK--VAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
V +NK+D+ +K D K +AE + +F S + G + L +Y+ +
Sbjct: 120 ----VFLLNKIDVESKYIDDTKAFLAENYSD----SLLFPISAISGENVDKLLEYITSKA 171
Query: 315 K 315
K
Sbjct: 172 K 172
>gi|429205943|ref|ZP_19197212.1| GTP-binding protein Era [Rhodobacter sp. AKP1]
gi|428191079|gb|EKX59622.1| GTP-binding protein Era [Rhodobacter sp. AKP1]
Length = 304
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 8/176 (4%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E ++ V +IG PNAGKS+++N MVG KV+ V+ K TT + GV + QI DT
Sbjct: 3 ETTRAGFVALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGQAQIVFVDT 62
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PGL + + V +AW +V++++ + HR LT + I+ M +
Sbjct: 63 PGLFRPRRRLD----RAMVAAAWGGAADADVIVLLVEAHRGLTEGTQAI---IDAMRDRI 115
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P Q L +NK+D V K + LL +A++ + FM S KG G++ L ++L
Sbjct: 116 PQGQTVALAINKIDRV-KAEVLLGLAQELNGAFPFAETFMISAEKGHGVEKLRRWL 170
>gi|91201100|emb|CAJ74159.1| strongly similar to GTP-binding protein Era [Candidatus Kuenenia
stuttgartiensis]
Length = 301
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 97/181 (53%), Gaps = 15/181 (8%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D +S V +IG PN GKS++IN +G K++ V+ K TT +++G++TK D QI FDTP
Sbjct: 9 DFRSGYVAVIGEPNVGKSTLINNYMGCKLSIVTHKPQTTRKKIMGILTKEDYQIIFFDTP 68
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G++ +++ K V++A+S + ++L+++ + + V++ K A
Sbjct: 69 GIIEP----TYELQKYMVKTAYSVIKEADILLMMVEPFKQPAKIHRDVVK------KLAT 118
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL----TQYLM 311
+ +L +NKVD+V K K LL + + L + I S +G L+ L QYL
Sbjct: 119 FNKPILLVINKVDMVEKDK-LLPIIASYNTLMKFSEIIPISAKEGTNLERLLSLIVQYLP 177
Query: 312 E 312
E
Sbjct: 178 E 178
>gi|330993373|ref|ZP_08317308.1| GTP-binding protein era-like protein [Gluconacetobacter sp. SXCC-1]
gi|329759403|gb|EGG75912.1| GTP-binding protein era-like protein [Gluconacetobacter sp. SXCC-1]
Length = 305
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+GAPNAGKS+++N M GTK++ VS K TT VLG++ + QI + DTPG+ +
Sbjct: 16 VAIVGAPNAGKSTLLNRMAGTKLSIVSPKAQTTRFRVLGILMRHGAQILLVDTPGIFQPR 75
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW+ + ++ +++ D +T + A K++
Sbjct: 76 RRLD----RAMVAAAWTGSDDADITLLIVDARAGMTDALR------AIAARLAEQKRRLW 125
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK DLV K+ LL + + + E +FM S G G+ L L
Sbjct: 126 LVLNKTDLV-KRDTLLPLTAELSAILPVEHVFMVSARSGEGVDDLLDRL 173
>gi|308811126|ref|XP_003082871.1| GTP-binding protein-like (ISS) [Ostreococcus tauri]
gi|116054749|emb|CAL56826.1| GTP-binding protein-like (ISS) [Ostreococcus tauri]
Length = 413
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 99/178 (55%), Gaps = 10/178 (5%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
KS V I+G PNAGKS+++N +VGTK++ V+ K TT H +LG++++ Q+ + DTPG
Sbjct: 110 HKSGYVAIVGRPNAGKSTLMNDLVGTKLSIVTFKPQTTRHRILGIVSEDAYQMVLLDTPG 169
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+M+ + ++ D + ++S +++ +V+ + D R P L + GK+ P
Sbjct: 170 VMVEE--FNKLD-GIMLKSVRNSMANADVMFYIVDAAR---DPYGAWEGLAPKKGKRVP- 222
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK DLV ++ ++++ + F+ G + + S L G++ + + +++
Sbjct: 223 ---TALILNKCDLVGDRERIMELIDYFRAQDGIDDVLPISALNSTGVENVKNWALDRL 277
>gi|77462221|ref|YP_351725.1| GTP-binding protein Era [Rhodobacter sphaeroides 2.4.1]
gi|126461083|ref|YP_001042197.1| GTP-binding protein Era [Rhodobacter sphaeroides ATCC 17029]
gi|332560102|ref|ZP_08414424.1| GTPase Era [Rhodobacter sphaeroides WS8N]
gi|77386639|gb|ABA77824.1| GTP-binding protein, Era-like [Rhodobacter sphaeroides 2.4.1]
gi|126102747|gb|ABN75425.1| GTP-binding protein Era [Rhodobacter sphaeroides ATCC 17029]
gi|332277814|gb|EGJ23129.1| GTPase Era [Rhodobacter sphaeroides WS8N]
Length = 304
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 8/176 (4%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E ++ V +IG PNAGKS+++N MVG KV+ V+ K TT + GV + QI DT
Sbjct: 3 ETTRAGFVALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGQAQIVFVDT 62
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PGL + + V +AW +V++++ + HR LT + I+ M +
Sbjct: 63 PGLFRPRRRLD----RAMVAAAWGGAADADVIVLLVEAHRGLTEGTQAI---IDAMRDRI 115
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P Q L +NK+D V K + LL +A++ + FM S KG G++ L ++L
Sbjct: 116 PQGQTVALAINKIDRV-KAEVLLGLAQELNGAFPFAETFMISAEKGHGVEKLRRWL 170
>gi|118399315|ref|XP_001031983.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|89286319|gb|EAR84320.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
Length = 439
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 97/220 (44%), Gaps = 55/220 (25%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKAD--TQICIFDTP 195
KS+ V ++G PNAGKSS++NY+V ++++AVS K NTT +LGV T + TQI +DTP
Sbjct: 86 KSLDVALLGPPNAGKSSLMNYIVKSQISAVSNKANTTYESILGVHTNLEKQTQILFYDTP 145
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFD------------------------ 231
G+ +K K V AW +N + + D
Sbjct: 146 GIT-----KQYKYSKAYVTRAWDILNDVNKAIFMIDGVKTLDDKIREALKRLNSLKYNEK 200
Query: 232 ----------------VH----RHLTSPDSRVIRLI-ERMGKQAPPKQKRVLCMNKVDLV 270
V+ +H+ S D + E G + PK VL +NK+DL
Sbjct: 201 ANKKIDQITQLNQDDPVYKEKLKHILSTDHNKADITDESYGSSSFPK---VLVVNKMDLC 257
Query: 271 TKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
T KK L + + + L ++ F S G G+ L +YL
Sbjct: 258 TNKKKLNWIVSEIEDLSKFDHKFFISCETGYGIPQLLEYL 297
>gi|375090585|ref|ZP_09736899.1| GTP-binding protein Era [Facklamia languida CCUG 37842]
gi|374565346|gb|EHR36617.1| GTP-binding protein Era [Facklamia languida CCUG 37842]
Length = 301
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 96/175 (54%), Gaps = 11/175 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V +IG PN GKS+++N ++G K+A +S K TT +++ GV T+ D QI DTPG
Sbjct: 7 KSGFVTLIGRPNVGKSTLMNQIIGQKIAIMSDKAQTTRNKIQGVYTRPDAQIVFMDTPG- 65
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
++K ++ D V+ +A+SA+ + ++V+ + + D V+ + + K
Sbjct: 66 -VHKPKHALGDFMVK--TAYSAIQGVDAVLVLVNAAEKMGPGDRFVLDRVRDL------K 116
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L +NK+DL+ K + L+ + +Q+ ++ +F S L G + L + L+E
Sbjct: 117 IPVCLVVNKIDLIDKTQ-LMPIIDQYTQEYPFDEVFPISALTGESVDRLLERLVE 170
>gi|347528865|ref|YP_004835612.1| GTP-binding protein Era [Sphingobium sp. SYK-6]
gi|345137546|dbj|BAK67155.1| GTP-binding protein Era [Sphingobium sp. SYK-6]
Length = 302
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 89/178 (50%), Gaps = 11/178 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
E+ Q + ++GAPNAGKS+++N +VG KVA S K TT VLG+ + +TQ+ + D
Sbjct: 5 EKPQHCGVIAVVGAPNAGKSTLVNALVGQKVAITSPKAQTTRTRVLGIAIQDETQLVLVD 64
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG+ S + + V++AW +++ +V D L ++ G
Sbjct: 65 TPGIFQP----SRRLDRAMVQAAWGGTQDADLIALVVDGRAGLGPKMEPILE-----GLA 115
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
P+ K L +NKVD+ K K L ++ + +P + IF S G GL L +M
Sbjct: 116 TRPEAKW-LILNKVDIAAKDKLLALTSKLHERVP-FAEIFFVSAATGDGLPELRTAMM 171
>gi|358012514|ref|ZP_09144324.1| GTPase Era [Acinetobacter sp. P8-3-8]
Length = 342
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 97/179 (54%), Gaps = 14/179 (7%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D +S V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++A +Q DTP
Sbjct: 36 DYRSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSRAKSQAVFVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL V+F V +P+ ++ +E++
Sbjct: 96 GMHKKEVRAINKMMNKAAHSALRDVNL-----VLFVVDAQKWTPNDDLV--LEKLKNAEM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGL----KALTQYL 310
P VL +NK+D + K+ +L + ++ L + I S L+GA L +A+ +YL
Sbjct: 149 PV---VLVINKIDTLENKRLILPLIQERAKLMNFAEIVPVSALRGANLDHLREAIEKYL 204
>gi|119383172|ref|YP_914228.1| GTP-binding protein Era [Paracoccus denitrificans PD1222]
gi|119372939|gb|ABL68532.1| GTP-binding protein Era [Paracoccus denitrificans PD1222]
Length = 303
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 9/172 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N MVG KV+ V+ K TT + G+ + +QI DTPG+ +
Sbjct: 9 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGIAMRGASQIVFVDTPGIFRPR 68
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
VK A +V++++ + HR LT +I + P V
Sbjct: 69 RRLDRSMVKAAWGGA----ADADVILLLIEAHRGLTDGTQAIIDNLRDHAGTTPV----V 120
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
L +NK+D V K + LL +++Q + R FM S KG G L ++L Q
Sbjct: 121 LVINKIDRV-KSETLLALSQQVNAAFDFTRTFMISAEKGHGCDDLLEWLAGQ 171
>gi|118594602|ref|ZP_01551949.1| GTPase [Methylophilales bacterium HTCC2181]
gi|118440380|gb|EAV47007.1| GTPase [Methylophilales bacterium HTCC2181]
Length = 294
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 13/174 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
K + I+G PN GKS+++NY VGTK++ SRK TT +++LG+ + +TQ DTPG
Sbjct: 6 KCGTIAIVGQPNVGKSTLLNYFVGTKLSITSRKAQTTRYQLLGIHSSPNTQYIFVDTPGY 65
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRH-LTSPDSRVIRLIERMGKQAPP 256
L ++ + V+ A L EV +++F + L D +++ +I P
Sbjct: 66 QLKHLNMLNRGLNKTVQQA-----LKEVDVILFLIEPGVLDQTDLKILSMI-------PG 113
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ VL +NKVDL+ K LL ++ + ++ I TS K L+ L Q L
Sbjct: 114 ETPVVLAINKVDLLKDKNKLLGYIKELDGIGRFQSIVPTSVKKSNNLEPLMQAL 167
>gi|303288864|ref|XP_003063720.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454788|gb|EEH52093.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 292
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 97/184 (52%), Gaps = 22/184 (11%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
+S V I+G PNAGKS+ +N +VGTK++ V+ K TT H +LG++++ D Q+ + DTPG
Sbjct: 1 HRSGYVAIVGRPNAGKSTFMNALVGTKLSIVTYKPQTTRHRILGLVSEDDFQMVLLDTPG 60
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLI--ERMGKQA 254
+M + ++ D ++ ++S +A+ +VL+ + D R P L+ R G
Sbjct: 61 VM--REEFNKLD-EMMLKSVRNAMANADVLLAIVDARR---DPLGNFEGLLPERRPGDDP 114
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAE----QFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P + ++ K DLL V E F+ PG ER+F S L G G A+ ++
Sbjct: 115 AP----------LGIIINKCDLLGVDEIRRKTFESYPGVERVFPVSALAGVGHDAVQRWA 164
Query: 311 MEQF 314
+ +
Sbjct: 165 VSKL 168
>gi|400755829|ref|YP_006564197.1| GTP-binding protein Era [Phaeobacter gallaeciensis 2.10]
gi|398654982|gb|AFO88952.1| GTP-binding protein Era [Phaeobacter gallaeciensis 2.10]
Length = 301
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N MVG KV+ V+ K TT + GV + ++QI DTPGL +
Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGESQIVFVDTPGLFQPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW +V++++ + HR +T R++ +E +G+ +K
Sbjct: 68 RRLD----RAMVAAAWGGAADADVVVLMVEAHRGITEGVERILEGLENIGE----GRKIA 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+D V + + LL + + + FM S KG G+ L +L EQ
Sbjct: 120 LAINKIDRV-QSEVLLGLTKDLNERYAFADTFMISAEKGHGVDHLRGWLAEQL 171
>gi|325295030|ref|YP_004281544.1| GTP-binding protein Era-like-protein [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065478|gb|ADY73485.1| GTP-binding protein Era-like-protein [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 306
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 93/182 (51%), Gaps = 7/182 (3%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
E ++E KS V I+G PN GKS+++N +GTKVA V+ K TT H ++GV D QI
Sbjct: 2 EEQKEKFKSGYVAILGRPNVGKSTLLNSFLGTKVAIVTDKPQTTRHRIIGVKHLKDAQIV 61
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM 250
DTPG+ K + + E A+ + ++++ + D T D ++ ++++
Sbjct: 62 FLDTPGIHKEKFELN----RYMNEIAFGVIPDADIILFLIDARSGFTEVDKKI---LQKI 114
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
G++ K ++ +NK+D V K++ L + E K P I S +G L L L
Sbjct: 115 GEEKRKDTKVIVVINKIDGVPKEELLPLIDEIHKEFPFVSDIVPLSATRGTNLDRLLDLL 174
Query: 311 ME 312
++
Sbjct: 175 VK 176
>gi|289434744|ref|YP_003464616.1| GTP-binding protein Era [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|422419066|ref|ZP_16496021.1| GTP-binding protein Era [Listeria seeligeri FSL N1-067]
gi|289170988|emb|CBH27530.1| GTP-binding protein Era [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|313633219|gb|EFS00091.1| GTP-binding protein Era [Listeria seeligeri FSL N1-067]
Length = 301
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 95/174 (54%), Gaps = 17/174 (9%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N+++G K+A +S K TT ++V GV T ++QI DTPG
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPG- 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFE---VLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
++K + D V++ A+N F+ ++ V D D +I ++ + Q
Sbjct: 65 -IHKPKHKLGDFMVKI-----ALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNV--QT 116
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
P L +NK+DL++ ++L K+ EQ++ L +E I S L+G + L +
Sbjct: 117 P----VFLLINKIDLIS-PEELFKLIEQYRELLDFEEIIPISALQGNNVPNLLE 165
>gi|397590707|gb|EJK55129.1| hypothetical protein THAOC_25171 [Thalassiosira oceanica]
Length = 445
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 12/169 (7%)
Query: 130 EEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQI 189
E + + Q+ + + I+GAPNAGKS ++N +VG+KVAAVSRK +TT +LG T DTQ+
Sbjct: 59 ETSRPKQQRRLDIAIVGAPNAGKSQLLNSLVGSKVAAVSRKRHTTRSGILGARTFGDTQL 118
Query: 190 CIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVF-------DVHRHLTSPDSR 242
DTPG + + G + E++ +N L+VV D+ R L +
Sbjct: 119 VFIDTPGFLHHSKGAREGVRNLLSEASAEMMNADFALLVVDAAKTIDQDLKRTLVTLMML 178
Query: 243 VIRLIER-MGKQAPPKQKRV----LCMNKVDLVTKKKDLLKVAEQFKHL 286
+R R G + Q+ + + +NKVDLV K+ LL A + L
Sbjct: 179 ALRSTGREEGSRVFSDQRHLGRFSVVLNKVDLVKPKEKLLATAAEVGSL 227
>gi|374299543|ref|YP_005051182.1| GTP-binding protein Era-like-protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332552479|gb|EGJ49523.1| GTP-binding protein Era-like-protein [Desulfovibrio africanus str.
Walvis Bay]
Length = 307
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 99/190 (52%), Gaps = 18/190 (9%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
+ ++K V ++G PNAGKS+ +N+++G KVA VS K TT +++ G+ T Q+ D
Sbjct: 4 DSNRKFGMVALMGPPNAGKSTFLNHVLGQKVAIVSPKPQTTRNQISGIWTTERGQVVFLD 63
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRH------LTSPDSRVIRLI 247
TPG+ + K K ++SAW AV V++V D + +S S + + +
Sbjct: 64 TPGVHQLRG----KMNKFLLQSAWQAVAQSNVVLVFLDAAAYAGRLEKFSSESSPLTQGL 119
Query: 248 ERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHL-PGYERIFMTSGLKGAGLKAL 306
++ P ++ +NKVD V K DLL + + + PG E IF S L G G+ L
Sbjct: 120 QK------PGLPLIVAVNKVDKVKNKADLLSLMARIAEVWPGAE-IFPISALTGDGVPEL 172
Query: 307 TQYLMEQFKD 316
++++ + +
Sbjct: 173 LEHVLAKLPE 182
>gi|114327657|ref|YP_744814.1| GTP-binding protein Era [Granulibacter bethesdensis CGDNIH1]
gi|114315831|gb|ABI61891.1| GTP-binding protein era [Granulibacter bethesdensis CGDNIH1]
Length = 335
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 91/174 (52%), Gaps = 18/174 (10%)
Query: 144 IIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVM---TKAD--TQICIFDTPGLM 198
++GAPNAGKS+++N + G KV+ VS K TT VLG+ T+A +QI + DTPG+
Sbjct: 45 LLGAPNAGKSTLVNALTGAKVSIVSPKAQTTRFRVLGIAMHQTEAGETSQILMVDTPGIF 104
Query: 199 LNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQ 258
+ + + V +AW+ V ++ +++ D LT D R I IER+G +
Sbjct: 105 TPR----RRLDRAMVAAAWTGVQDADLGLLMVDARAGLTE-DVRAI--IERLG-----NR 152
Query: 259 KRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
+ L +NKVDLV LL +A+ L +E F S K GL L L +
Sbjct: 153 RTWLVLNKVDLV-PAPSLLPLAQALSDLAKFEETFFISAAKRDGLDMLLTALAQ 205
>gi|424714338|ref|YP_007015053.1| GTPase Era [Listeria monocytogenes serotype 4b str. LL195]
gi|424013522|emb|CCO64062.1| GTPase Era [Listeria monocytogenes serotype 4b str. LL195]
Length = 337
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 96/180 (53%), Gaps = 17/180 (9%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
V E KS V I+G PN GKS+++N+++G K+A +S K TT ++V GV T ++QI
Sbjct: 36 VMSEPFKSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIF 95
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFE---VLMVVFDVHRHLTSPDSRVIRLIE 248
DTPG ++K + D V++ A+N F+ ++ V D D +I ++
Sbjct: 96 IDTPG--IHKPKHKLGDFMVKI-----ALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLK 148
Query: 249 RMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
+ Q P L +NK+DL+ +DL K+ EQ++ L ++ I S L+G + L +
Sbjct: 149 NV--QTPV----FLLINKIDLIA-PEDLFKLIEQYRDLMDFDEIIPISALQGNNVPNLLE 201
>gi|407784394|ref|ZP_11131543.1| GTPase Era [Celeribacter baekdonensis B30]
gi|407204096|gb|EKE74077.1| GTPase Era [Celeribacter baekdonensis B30]
Length = 307
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 94/181 (51%), Gaps = 8/181 (4%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ +S V +IG PNAGKS+++N MVG KV+ V+ K TT + GV + D QI DTP
Sbjct: 3 ETRSGFVALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAIEGDAQIVFVDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ-- 253
G+ K + V +AW +V++++ + HR LT ++ ++ Q
Sbjct: 63 GIFKPKRRLD----RAMVTAAWGGAADADVVVLLVEAHRGLTEGVEAILAALDEQDAQYK 118
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
PP+ K L +NK+D+V +K LL + + + FM S KG G+ L ++L ++
Sbjct: 119 GPPR-KIALAINKIDMVPVEK-LLDMTKVLNERRNFVETFMISAEKGRGVDDLRKWLAKE 176
Query: 314 F 314
Sbjct: 177 L 177
>gi|269792674|ref|YP_003317578.1| GTP-binding protein Era [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100309|gb|ACZ19296.1| GTP-binding protein Era [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 303
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 11/178 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V ++G PN GKSS+ N +VG KV AVS K TT H + G++ QI + DTPG+
Sbjct: 6 RSGCVALLGRPNVGKSSLANALVGEKVMAVSPKAQTTRHAIRGIVQGDGYQIVLVDTPGV 65
Query: 198 MLNKSGYSHKDVKVRVESAWSAV-NLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ H + + +A+ ++ + VV + ++S D RV+ I+ G+ A
Sbjct: 66 HEPR----HDLGRFMISQIRAALEDVCGICFVVDATSKGISSLDRRVLEWIQEAGRPA-- 119
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
+LC+NKVDL+ +K D V ++ ++ + S +G L L + +++
Sbjct: 120 ----LLCVNKVDLLARKDDFWDVVALYQDQYRFDAVVPVSATQGTNLDVLKEAMVKWL 173
>gi|94502128|ref|ZP_01308629.1| GTP-binding protein Era [Bermanella marisrubri]
gi|94425730|gb|EAT10737.1| GTP-binding protein Era [Oceanobacter sp. RED65]
Length = 299
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 11/180 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+QK + I+G PN GKS+++N ++G K++ SRK TT H++LG+ T A+ Q DTP
Sbjct: 3 EQKCGYIAIVGRPNVGKSTLLNNILGQKLSITSRKPQTTRHQILGMKTTANVQAIYVDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVES-AWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
GL GYS K + + A +A+N +V +VVF + R P+ + + +E++
Sbjct: 63 GL---HEGYSEKALNRYINKVATTAIN--DVDLVVFLIDRTKWMPEDQSV--LEKIQASK 115
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
P +L +NK+D + K+ LL E+ ++ +F S G + L + Q
Sbjct: 116 VPC---ILVINKLDHLADKQSLLPYLEEVSQRHDFKEVFPISAKTGYNVAELEAAIARQL 172
>gi|315303200|ref|ZP_07873857.1| GTP-binding protein Era [Listeria ivanovii FSL F6-596]
gi|347548848|ref|YP_004855176.1| putative GTP binding protein [Listeria ivanovii subsp. ivanovii PAM
55]
gi|313628427|gb|EFR96903.1| GTP-binding protein Era [Listeria ivanovii FSL F6-596]
gi|346981919|emb|CBW85900.1| Putative GTP binding protein [Listeria ivanovii subsp. ivanovii PAM
55]
Length = 301
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 94/172 (54%), Gaps = 17/172 (9%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N+++G K+A +S K TT ++V GV T ++QI DTPG
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPG- 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFE---VLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
++K + D V++ A+N F+ ++ V D D +I ++ + Q
Sbjct: 65 -IHKPKHKLGDFMVKI-----ALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNV--QT 116
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
P L +NK+DL++ ++L K+ EQ++ L +E I S L+G + L
Sbjct: 117 P----VFLLINKIDLIS-PEELFKLIEQYRELLDFEEIIPISALQGNNVPNL 163
>gi|383641432|ref|ZP_09953838.1| GTPase Era [Sphingomonas elodea ATCC 31461]
Length = 302
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 91/174 (52%), Gaps = 11/174 (6%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
Q V I+GAPNAGKS+++N +VG KVA VS K TT V+G+ + DTQI + DTPG
Sbjct: 8 QSCGVVAILGAPNAGKSTLVNALVGQKVAIVSPKAQTTRARVMGIAIEGDTQIILVDTPG 67
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ + + V +AW + +++ +V D + +V +I+ + +
Sbjct: 68 IFEPERRLD----RAMVAAAWDGTDGADLVALVVDGKGGI---GPKVHAVIDSLRGR--- 117
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K +++L +NKVD+ K + L A+ + LP ++ + S G G+ L L
Sbjct: 118 KGRKILILNKVDIADKPRLLGHAAKLNEALP-FDETYFVSAQTGDGVPELKAAL 170
>gi|16803502|ref|NP_464987.1| GTP-binding protein Era [Listeria monocytogenes EGD-e]
gi|46907690|ref|YP_014079.1| GTP-binding protein Era [Listeria monocytogenes serotype 4b str.
F2365]
gi|47093486|ref|ZP_00231249.1| GTP-binding protein Era [Listeria monocytogenes str. 4b H7858]
gi|47095413|ref|ZP_00233023.1| GTP-binding protein Era [Listeria monocytogenes str. 1/2a F6854]
gi|226224063|ref|YP_002758170.1| GTP binding protein [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|254824479|ref|ZP_05229480.1| GTP-binding protein Era [Listeria monocytogenes FSL J1-194]
gi|254827750|ref|ZP_05232437.1| GTP-binding protein Era [Listeria monocytogenes FSL N3-165]
gi|254852087|ref|ZP_05241435.1| GTP-binding protein Era [Listeria monocytogenes FSL R2-503]
gi|254912136|ref|ZP_05262148.1| GTP-binding protein Era [Listeria monocytogenes J2818]
gi|254936464|ref|ZP_05268161.1| GTP-binding protein Era [Listeria monocytogenes F6900]
gi|255521277|ref|ZP_05388514.1| GTP-binding protein Era [Listeria monocytogenes FSL J1-175]
gi|284801849|ref|YP_003413714.1| GTP-binding protein Era [Listeria monocytogenes 08-5578]
gi|284994991|ref|YP_003416759.1| GTP-binding protein Era [Listeria monocytogenes 08-5923]
gi|300765605|ref|ZP_07075584.1| GTP-binding protein Era [Listeria monocytogenes FSL N1-017]
gi|386043773|ref|YP_005962578.1| GTP-binding protein Era [Listeria monocytogenes 10403S]
gi|386047114|ref|YP_005965446.1| GTP-binding protein Era [Listeria monocytogenes J0161]
gi|386050438|ref|YP_005968429.1| GTP-binding protein Era [Listeria monocytogenes FSL R2-561]
gi|386053715|ref|YP_005971273.1| GTP-binding protein Era [Listeria monocytogenes Finland 1998]
gi|386732201|ref|YP_006205697.1| GTPase Era [Listeria monocytogenes 07PF0776]
gi|404281019|ref|YP_006681917.1| GTP-binding protein [Listeria monocytogenes SLCC2755]
gi|404283954|ref|YP_006684851.1| GTP-binding protein [Listeria monocytogenes SLCC2372]
gi|404286884|ref|YP_006693470.1| GTP-binding protein [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|404410761|ref|YP_006696349.1| GTP-binding protein [Listeria monocytogenes SLCC5850]
gi|404413540|ref|YP_006699127.1| GTP-binding protein [Listeria monocytogenes SLCC7179]
gi|405752682|ref|YP_006676147.1| GTP-binding protein [Listeria monocytogenes SLCC2378]
gi|405755620|ref|YP_006679084.1| GTP-binding protein [Listeria monocytogenes SLCC2540]
gi|405758510|ref|YP_006687786.1| GTP-binding protein [Listeria monocytogenes SLCC2479]
gi|406704235|ref|YP_006754589.1| GTP-binding protein (Bex protein) [Listeria monocytogenes L312]
gi|417316008|ref|ZP_12102666.1| GTPase Era [Listeria monocytogenes J1816]
gi|21263579|sp|Q8Y750.1|ERA_LISMO RecName: Full=GTPase Era
gi|67460115|sp|Q71ZK8.1|ERA_LISMF RecName: Full=GTPase Era
gi|259645949|sp|C1KVA9.1|ERA_LISMC RecName: Full=GTPase Era
gi|16410891|emb|CAC99540.1| lmo1462 [Listeria monocytogenes EGD-e]
gi|46880959|gb|AAT04256.1| GTP-binding protein Era [Listeria monocytogenes serotype 4b str.
F2365]
gi|47016234|gb|EAL07157.1| GTP-binding protein Era [Listeria monocytogenes serotype 1/2a str.
F6854]
gi|47018162|gb|EAL08932.1| GTP-binding protein Era [Listeria monocytogenes str. 4b H7858]
gi|225876525|emb|CAS05234.1| Putative GTP binding protein [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|258600129|gb|EEW13454.1| GTP-binding protein Era [Listeria monocytogenes FSL N3-165]
gi|258605386|gb|EEW17994.1| GTP-binding protein Era [Listeria monocytogenes FSL R2-503]
gi|258609056|gb|EEW21664.1| GTP-binding protein Era [Listeria monocytogenes F6900]
gi|284057411|gb|ADB68352.1| GTP-binding protein Era [Listeria monocytogenes 08-5578]
gi|284060458|gb|ADB71397.1| GTP-binding protein Era [Listeria monocytogenes 08-5923]
gi|293590107|gb|EFF98441.1| GTP-binding protein Era [Listeria monocytogenes J2818]
gi|293593717|gb|EFG01478.1| GTP-binding protein Era [Listeria monocytogenes FSL J1-194]
gi|300513706|gb|EFK40774.1| GTP-binding protein Era [Listeria monocytogenes FSL N1-017]
gi|328465505|gb|EGF36734.1| GTPase Era [Listeria monocytogenes J1816]
gi|345534105|gb|AEO03546.1| GTP-binding protein Era [Listeria monocytogenes J0161]
gi|345537007|gb|AEO06447.1| GTP-binding protein Era [Listeria monocytogenes 10403S]
gi|346424284|gb|AEO25809.1| GTP-binding protein Era [Listeria monocytogenes FSL R2-561]
gi|346646366|gb|AEO38991.1| GTP-binding protein Era [Listeria monocytogenes Finland 1998]
gi|384390959|gb|AFH80029.1| GTPase Era [Listeria monocytogenes 07PF0776]
gi|404221882|emb|CBY73245.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC2378]
gi|404224820|emb|CBY76182.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC2540]
gi|404227654|emb|CBY49059.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC2755]
gi|404230587|emb|CBY51991.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC5850]
gi|404233456|emb|CBY54859.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC2372]
gi|404236392|emb|CBY57794.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC2479]
gi|404239239|emb|CBY60640.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC7179]
gi|404245813|emb|CBY04038.1| GTP-binding protein (Bex protein) [Listeria monocytogenes serotype
7 str. SLCC2482]
gi|406361265|emb|CBY67538.1| GTP-binding protein (Bex protein) [Listeria monocytogenes L312]
gi|441471149|emb|CCQ20904.1| GTPase Era [Listeria monocytogenes]
gi|441474277|emb|CCQ24031.1| GTPase Era [Listeria monocytogenes N53-1]
Length = 301
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 94/174 (54%), Gaps = 17/174 (9%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N+++G K+A +S K TT ++V GV T ++QI DTPG
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPG- 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFE---VLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
++K + D V++ A+N F+ ++ V D D +I ++ + Q
Sbjct: 65 -IHKPKHKLGDFMVKI-----ALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNV--QT 116
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
P L +NK+DL+ +DL K+ EQ++ L ++ I S L+G + L +
Sbjct: 117 P----VFLLINKIDLIA-PEDLFKLIEQYRDLMDFDEIIPISALQGNNVPNLLE 165
>gi|156548266|ref|XP_001601275.1| PREDICTED: GTPase Era, mitochondrial-like [Nasonia vitripennis]
Length = 346
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 11/185 (5%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS+ + I+G PNAGKS++IN+++G V A S K +TT + + DTQ+ DTPGL
Sbjct: 49 KSLKIAILGLPNAGKSTLINHLIGRPVCATSSKIHTTRKKASAIFCLDDTQLVFIDTPGL 108
Query: 198 MLNKSGYSHK---DVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
+ +K K V+ + ++ VL + ++H D +++ ++E +
Sbjct: 109 VGRGDVKKYKLEDSFKKDVQHSMKEADVIGVLQDMTNLHAR-KFIDKKIMSILEL----S 163
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHL---PGYERIFMTSGLKGAGLKALTQYLM 311
+ +L +NK+D + KK LL+V + P + +FM S L G G+ L Y +
Sbjct: 164 KAETNSILILNKIDTLKHKKLLLEVVQNLTSQEAGPKFSDVFMISALTGDGVDDLRNYFL 223
Query: 312 EQFKD 316
+ K+
Sbjct: 224 DSAKE 228
>gi|339624728|ref|ZP_08660517.1| GTPase [Fructobacillus fructosus KCTC 3544]
Length = 303
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 101/181 (55%), Gaps = 14/181 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V IIG PN GKS+++N +VG K+A +S K TT +++ G+ T D Q+ DTPG
Sbjct: 7 KSGFVAIIGRPNVGKSTLLNRIVGEKIAIMSNKAQTTRNKIQGIYTTDDAQVVFIDTPG- 65
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
++K S D V+ SA+SA++ + + V D + + D+ +I ++ + K P
Sbjct: 66 -VHKPQNSLGDYMVK--SAFSALHEADAIWFVVDASKKRGAGDNFIINRLKEV-KNTPI- 120
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKH-LPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
L +NKVDL+ KK+DL +V + ++ P + IF S +G + L + ++ KD
Sbjct: 121 ---FLLVNKVDLL-KKEDLFEVIKTYQEDAPEWTEIFPISATEGDNVPELLETVI---KD 173
Query: 317 L 317
L
Sbjct: 174 L 174
>gi|310815099|ref|YP_003963063.1| GTP-binding protein Era [Ketogulonicigenium vulgare Y25]
gi|385232650|ref|YP_005793992.1| GTP-binding protein Era [Ketogulonicigenium vulgare WSH-001]
gi|308753834|gb|ADO41763.1| GTP-binding protein Era [Ketogulonicigenium vulgare Y25]
gi|343461561|gb|AEM39996.1| GTP-binding protein Era [Ketogulonicigenium vulgare WSH-001]
Length = 307
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ ++ V +IG PNAGKS+++N MVG KV+ V+ K TT + GV + D QI DT
Sbjct: 6 ENTRAGFVALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAIEGDAQIVFVDT 65
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIR-LIERMGKQ 253
PGL + + V +AW +V++++ + HR LT +I L +R+GK
Sbjct: 66 PGLFRPRRRLD----RAMVAAAWGGAGDADVVLMLIEAHRGLTDGAKAIIESLQDRVGKT 121
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V K ++LL + E + + FM S +G G AL +L
Sbjct: 122 PV-----ALVINKIDRV-KAEELLALTEAANAAFPFVQTFMISAERGYGCDALKGWL 172
>gi|254932647|ref|ZP_05266006.1| GTP-binding protein Era [Listeria monocytogenes HPB2262]
gi|405749806|ref|YP_006673272.1| GTP-binding protein [Listeria monocytogenes ATCC 19117]
gi|417317582|ref|ZP_12104196.1| GTPase Era [Listeria monocytogenes J1-220]
gi|424823223|ref|ZP_18248236.1| GTP-binding protein Era [Listeria monocytogenes str. Scott A]
gi|293584206|gb|EFF96238.1| GTP-binding protein Era [Listeria monocytogenes HPB2262]
gi|328474974|gb|EGF45768.1| GTPase Era [Listeria monocytogenes J1-220]
gi|332311903|gb|EGJ24998.1| GTP-binding protein Era [Listeria monocytogenes str. Scott A]
gi|404219006|emb|CBY70370.1| GTP-binding protein (Bex protein) [Listeria monocytogenes ATCC
19117]
Length = 301
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 94/174 (54%), Gaps = 17/174 (9%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N+++G K+A +S K TT ++V GV T ++QI DTPG
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPG- 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFE---VLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
++K + D V++ A+N F+ ++ V D D +I ++ + Q
Sbjct: 65 -IHKPKHKLGDFMVKI-----ALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNV--QT 116
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
P L +NK+DL+ +DL K+ EQ++ L ++ I S L+G + L +
Sbjct: 117 P----VFLLINKIDLIA-PEDLFKLIEQYRDLMDFDEIIPISALQGNNVPNLLE 165
>gi|320353093|ref|YP_004194432.1| GTP-binding protein Era [Desulfobulbus propionicus DSM 2032]
gi|320121595|gb|ADW17141.1| GTP-binding protein Era [Desulfobulbus propionicus DSM 2032]
Length = 299
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 93/178 (52%), Gaps = 7/178 (3%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
+S IIG PNAGKS+++N+++G K+A V+ K TT + ++G++T Q+ + DTPG
Sbjct: 6 HRSGVAAIIGPPNAGKSTLLNHLLGQKIAIVTPKPQTTRNRIMGIVTGTSYQMILLDTPG 65
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
L + + + V+V +ES L E +++F V + R R E G
Sbjct: 66 LHAAREEMNRQMVRVALES------LAEADVILFLVDGADWAEKKREQRAEEFQGYLEKM 119
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
VL +NKVDL+ + LL V + ++ L + + S L+G G+ LT L+ +
Sbjct: 120 TCPVVLALNKVDLLPSAQ-LLPVMDWYRRLYPFAAMVPISALRGTGIDTLTDELVARL 176
>gi|410466355|ref|ZP_11319277.1| GTP-binding protein Era [Desulfovibrio magneticus str. Maddingley
MBC34]
gi|409980822|gb|EKO37491.1| GTP-binding protein Era [Desulfovibrio magneticus str. Maddingley
MBC34]
Length = 305
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 97/179 (54%), Gaps = 16/179 (8%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++G NAGKS+++N ++G K++ VS K TT + + G++T+ D Q DTPGL K
Sbjct: 10 VVMLGPTNAGKSTLLNRLIGQKISIVSPKPQTTRNSISGIITQGDVQAVFLDTPGLHRQK 69
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHL-----TSPDSRVIRLIERMGKQAPP 256
G + + + SA++A+ +V++++ D ++ +PD R I ++ +G P
Sbjct: 70 RGIA----PLLLRSAYAALGQADVVLLILDAAQYARRLDGLAPDLRPI--VKAVGDGRLP 123
Query: 257 KQKRVLCMNKVDLVTKKKDLLKV-AEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
++ +NK D+V +K LL V A + LP E IF S L G G+ L LM +
Sbjct: 124 V---LIALNKADVVREKARLLPVLAAVSEALPAAE-IFPISALTGLGVDDLLTALMARL 178
>gi|399991332|ref|YP_006571572.1| GTP-binding protein Era [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398655887|gb|AFO89853.1| GTP-binding protein Era [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
Length = 301
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N MVG KV+ V+ K TT + GV + ++QI DTPGL +
Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGESQIVFVDTPGLFQPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW +V++++ + HR +T R++ +E +G+ +K
Sbjct: 68 RRLD----RAMVAAAWGGAADADVVVLMVEAHRGITEGVERILEGLENIGE----GRKIA 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+D V + LL + + + FM S KG G+ L +L EQ
Sbjct: 120 LAINKIDRV-QSAVLLGLTKDLNERYAFADTFMISAEKGHGVDHLRGWLAEQL 171
>gi|365157904|ref|ZP_09354149.1| GTPase Era [Bacillus smithii 7_3_47FAA]
gi|363622574|gb|EHL73733.1| GTPase Era [Bacillus smithii 7_3_47FAA]
Length = 304
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 95/181 (52%), Gaps = 15/181 (8%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS + IIG PN GKS+ +N ++G K+A +S K TT + + GV T D Q+ DTP
Sbjct: 7 DYKSGFISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNRIQGVYTTDDAQMIFIDTP 66
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K HK V++A +A+ ++++ + +V L + +I +++ + Q P
Sbjct: 67 GIHKPK----HKLGDFMVKTAVNALKEVDLILFMVNVTEGLGRGEQYIIEMLKDI--QTP 120
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYLM 311
L +NK+D + +L + EQ+K L ++ IF S L G L A+ +YL
Sbjct: 121 ----VFLVLNKIDQI-HPDELFPMIEQYKELYPFQEIFPISALNGNNVDRLLSAIKEYLP 175
Query: 312 E 312
E
Sbjct: 176 E 176
>gi|348677933|gb|EGZ17750.1| hypothetical protein PHYSODRAFT_498024 [Phytophthora sojae]
Length = 872
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 82/140 (58%), Gaps = 6/140 (4%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
K++ + +IG PNAGKSSI+N ++ V+AVS K NTT +LG+ T+ D Q+ +DTPGL
Sbjct: 215 KALDLAVIGRPNAGKSSIMNRLLNVTVSAVSPKYNTTRDRILGIYTEGDAQLSFYDTPGL 274
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIER-MGKQAPP 256
+ K +H+ V+ V +A + ++ ++V D + L D ++ +E+ + A
Sbjct: 275 I--KPKETHEYVQTLVTTAAETLQGVDLSLLVVDSVKRL---DDAALQALEKVLTTSAQV 329
Query: 257 KQKRVLCMNKVDLVTKKKDL 276
+L MNK DLV K++ +
Sbjct: 330 CSPTMLVMNKFDLVGKREKI 349
>gi|383502171|ref|YP_005415530.1| GTP-binding protein Era [Rickettsia australis str. Cutlack]
gi|378933182|gb|AFC71687.1| GTP-binding protein Era [Rickettsia australis str. Cutlack]
Length = 293
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 93/175 (53%), Gaps = 12/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+QK+++V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++DTP
Sbjct: 3 NQKTISVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILYDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K K V AWS+++ ++M++ D + ++ + + P
Sbjct: 63 GIFEPKGSLE----KAMVRCAWSSLHSANLVMLIIDSLKPFDDVTHDILDKLRSLN-IVP 117
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ +NK+D+ +K +D +K H P +F S L G + L +Y+
Sbjct: 118 -----IFLLNKIDIESKSRDDIKAFLMENH-PD-SLLFPISALSGKNINGLLEYI 165
>gi|113971182|ref|YP_734975.1| GTP-binding protein Era [Shewanella sp. MR-4]
gi|114048420|ref|YP_738970.1| GTP-binding protein Era [Shewanella sp. MR-7]
gi|117921464|ref|YP_870656.1| GTP-binding protein Era [Shewanella sp. ANA-3]
gi|113885866|gb|ABI39918.1| GTP-binding protein Era [Shewanella sp. MR-4]
gi|113889862|gb|ABI43913.1| GTP-binding protein Era [Shewanella sp. MR-7]
gi|117613796|gb|ABK49250.1| GTP-binding protein Era [Shewanella sp. ANA-3]
Length = 339
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 90/174 (51%), Gaps = 10/174 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIG PN GKS+++N ++G K++ S+K TT H ++G+ T QI DTPGL + +
Sbjct: 48 VAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPRQIVFIDTPGLHIEE 107
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAPPKQKR 260
+ R+ + +A +L +V MV+F V T+ D V+ + R G++ +K
Sbjct: 108 QRAIN-----RLMNRAAASSLADVSMVIFVVDGMTWTADDEMVLSKLRRGGEE----RKT 158
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
VL +NKVD + K+ L E+ ++ I S KG +K + + E
Sbjct: 159 VLAINKVDNIKDKEALFPYLEEVAKKYPFDEILPISASKGTNVKRILEMAAESL 212
>gi|163784387|ref|ZP_02179279.1| GTP-binding protein Era [Hydrogenivirga sp. 128-5-R1-1]
gi|159880342|gb|EDP73954.1| GTP-binding protein Era [Hydrogenivirga sp. 128-5-R1-1]
Length = 312
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
E+ K+ V ++G PN GKS+++N ++G KV+ VS K TT +LGV D QI D
Sbjct: 14 EDKFKAGFVALVGRPNVGKSTLLNNILGVKVSIVSPKPQTTRMRILGVKHDKDAQIIFLD 73
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVI-RLIERMGK 252
TPG+ K + K VESA S++ +++ ++ D + T D +++ ++++ K
Sbjct: 74 TPGVQKGKDILT----KTVVESAVSSMEEADLIAMIIDATKGWTKNDLQIVDNYLKKLDK 129
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+L +NKVD V K+ LL + EQ + ++ I S LKG L LTQ +
Sbjct: 130 PV------ILIINKVDKVPKEL-LLPLIEQSTKIYEFKEIVPISALKGVNLDRLTQVI 180
>gi|424745754|ref|ZP_18174015.1| GTP-binding protein Era [Acinetobacter baumannii WC-141]
gi|422941943|gb|EKU37006.1| GTP-binding protein Era [Acinetobacter baumannii WC-141]
Length = 342
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 94/175 (53%), Gaps = 10/175 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ Q DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL V+F + + +P+ ++ +E++
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNL-----VLFVIDAYKWTPNDDLV--LEKLKNAEM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P +L +NK D K+D+L + ++ L + I S L+GA L+ L++ +
Sbjct: 149 PV---ILVINKADTFEDKRDILPLIQERAKLMNFAEIVPVSALRGANLEHLSETI 200
>gi|217964392|ref|YP_002350070.1| GTP-binding protein Era [Listeria monocytogenes HCC23]
gi|290894223|ref|ZP_06557192.1| GTP-binding protein Era [Listeria monocytogenes FSL J2-071]
gi|386008233|ref|YP_005926511.1| GTP-binding protein (Bex protein) [Listeria monocytogenes L99]
gi|386026834|ref|YP_005947610.1| putative GTP binding protein Era [Listeria monocytogenes M7]
gi|404407900|ref|YP_006690615.1| GTP-binding protein [Listeria monocytogenes SLCC2376]
gi|422809543|ref|ZP_16857954.1| GTP-binding protein Era [Listeria monocytogenes FSL J1-208]
gi|254783659|sp|B8DE49.1|ERA_LISMH RecName: Full=GTPase Era
gi|217333662|gb|ACK39456.1| GTP-binding protein Era [Listeria monocytogenes HCC23]
gi|290556220|gb|EFD89765.1| GTP-binding protein Era [Listeria monocytogenes FSL J2-071]
gi|307571043|emb|CAR84222.1| GTP-binding protein (Bex protein) [Listeria monocytogenes L99]
gi|336023415|gb|AEH92552.1| putative GTP binding protein Era [Listeria monocytogenes M7]
gi|378753157|gb|EHY63742.1| GTP-binding protein Era [Listeria monocytogenes FSL J1-208]
gi|404242049|emb|CBY63449.1| GTP-binding protein (Bex protein) [Listeria monocytogenes SLCC2376]
Length = 301
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 94/174 (54%), Gaps = 17/174 (9%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N+++G K+A +S K TT ++V GV T ++QI DTPG
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPG- 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFE---VLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
++K + D V++ A+N F+ ++ V D D +I ++ + Q
Sbjct: 65 -IHKPKHKLGDFMVKI-----ALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNV--QT 116
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
P L +NK+DL+ +DL K+ EQ++ L ++ I S L+G + L +
Sbjct: 117 P----VFLLINKIDLIA-PEDLFKLIEQYRDLMEFDEIIPISALQGNNVPNLLE 165
>gi|350566286|ref|ZP_08934971.1| GTP-binding protein Era [Peptoniphilus indolicus ATCC 29427]
gi|348662912|gb|EGY79540.1| GTP-binding protein Era [Peptoniphilus indolicus ATCC 29427]
Length = 296
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 97/179 (54%), Gaps = 13/179 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS + IIG PN GKS+++N +VG K++A+S K TT +++ + T+ D Q DTPG+
Sbjct: 3 KSGFITIIGRPNVGKSTLLNQVVGQKISAISNKPQTTRNKITFIYTEEDFQAVFLDTPGI 62
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ +K ++ S +N +V+ + D + DS +I+ ++ + + P
Sbjct: 63 QSPKNKLGDYMLK----TSESTLNEVDVITYIVDCSTTIGKLDSYIIKTLKEINIKTPI- 117
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLK----ALTQYLME 312
VL +NK+D + +K +L ++ E + +L ++ I S LK G+K L +YL E
Sbjct: 118 ---VLLINKIDEI-QKGNLFELIEMYSNLNLFKEIIPISALKNDGVKDYIEVLRKYLPE 172
>gi|381184009|ref|ZP_09892687.1| GTPase Era [Listeriaceae bacterium TTU M1-001]
gi|380316096|gb|EIA19537.1| GTPase Era [Listeriaceae bacterium TTU M1-001]
Length = 301
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 17/166 (10%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N ++G K+A +S K TT ++V GV T+ D Q+ DTPG
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNQIIGQKIAIMSDKAQTTRNKVQGVYTEDDAQVVFIDTPG- 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLF---EVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
++K + D V+V A+N F +++ V D D + IE++
Sbjct: 65 -IHKPKHKLGDFMVKV-----ALNTFREVDLIYFVIDAESGFGRGDEFI---IEKLKNVE 115
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKG 300
P L +NK+DLV+K++ L+++ EQ+K L + I S L+G
Sbjct: 116 TP---VFLLINKIDLVSKER-LVELIEQYKDLLDFAEIIPISALEG 157
>gi|374602357|ref|ZP_09675350.1| GTPase Era [Paenibacillus dendritiformis C454]
gi|374391959|gb|EHQ63288.1| GTPase Era [Paenibacillus dendritiformis C454]
Length = 309
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 11/173 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N+++G K+A +S K TT +++ GV T DTQI DTPG+
Sbjct: 16 KSGFVAIVGRPNVGKSTLMNHVIGQKIAIMSDKPQTTRNKIHGVYTTEDTQIVFLDTPGI 75
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
KS +V A++ +N EV++ + DV L S D V +E++ K P
Sbjct: 76 HKRKSKLGDYMNQV----AYNTLNEVEVILFLVDVSAGLGSGDKFV---MEQLAKVKTPV 128
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+L MNK+D V +L + + + L + I S L G + L + L
Sbjct: 129 ---ILVMNKIDQV-HPDELPPMIKSYHELFDFAEIVPISALHGNNVTRLLEVL 177
>gi|433444369|ref|ZP_20409288.1| GTP-binding protein Era [Anoxybacillus flavithermus TNO-09.006]
gi|432001661|gb|ELK22534.1| GTP-binding protein Era [Anoxybacillus flavithermus TNO-09.006]
Length = 302
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 11/175 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
+E KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GV T D QI D
Sbjct: 3 QEGYKSGFVAIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTDDAQIIFID 62
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG ++K + D V+V A SA+ ++++ + + + D + IER+ +
Sbjct: 63 TPG--IHKPKHKLGDFMVKV--AQSALQEVDLILFMVNAVEGIGRGDEFI---IERLKQV 115
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
P L +NK+D V DLL + EQ++ L + + S L+G ++ L Q
Sbjct: 116 QTPV---FLVINKIDEV-HPDDLLPLIEQYRSLHSFAEVIPISALQGNNVETLLQ 166
>gi|262278197|ref|ZP_06055982.1| GTP-binding protein16S rRNA-binding,ribosome-associated GTPase
[Acinetobacter calcoaceticus RUH2202]
gi|262258548|gb|EEY77281.1| GTP-binding protein16S rRNA-binding,ribosome-associated GTPase
[Acinetobacter calcoaceticus RUH2202]
Length = 342
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 94/175 (53%), Gaps = 10/175 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ Q DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL V+F + + +P+ ++ +E++
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNL-----VLFVIDAYKWTPNDDLV--LEKLKNAEM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P +L +NK D K+D+L + ++ L + I S L+GA L+ L++ +
Sbjct: 149 PV---ILVINKADTFEDKRDILPLIQERAKLMNFAEIVPVSALRGANLEHLSETI 200
>gi|414154882|ref|ZP_11411199.1| GTPase Era [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411453713|emb|CCO09103.1| GTPase Era [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 302
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 95/177 (53%), Gaps = 11/177 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ +S V ++G PN GKS+++N +VG KVA +S K TT H++ V+T+ D QI DT
Sbjct: 6 ENFRSGFVALVGRPNVGKSTLLNKLVGQKVAIMSDKPQTTRHKIHSVLTRPDAQIVFLDT 65
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ + HK + VE A +A L EV +V+F V T P R I KQ
Sbjct: 66 PGIHKPR----HKLGEYMVEVALNA--LKEVDVVLFLVEA--TDPPGAGDRYIAEQLKQI 117
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
K L +NK+DLV KK+D+L ++K L + + S L G ++ L ++
Sbjct: 118 --KTPVFLMINKIDLV-KKEDVLASIVRYKDLLPFAEVIPVSALAGDNVERLIDTIV 171
>gi|350273170|ref|YP_004884483.1| GTP-binding protein era [Rickettsia japonica YH]
gi|348592383|dbj|BAK96344.1| GTP-binding protein era [Rickettsia japonica YH]
Length = 344
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 100/184 (54%), Gaps = 14/184 (7%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
K +QK+V+V IIG PN+GKS+++N ++G K++ V++K TT + G++T DTQ+ ++
Sbjct: 51 KISNQKTVSVCIIGRPNSGKSTLLNRIIGEKLSIVTQKVQTTRSIITGIITLKDTQVILY 110
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM-G 251
DTPG+ K K V AWS+++ ++++++ D L S D +++++
Sbjct: 111 DTPGIFEPKGSLE----KAMVRCAWSSLHSADLVLLIID---SLKSFDDITHNILDKLRS 163
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
P + +NK+D+ +K + +K H P +F S L G + L +Y+
Sbjct: 164 LNIVP----IFLLNKIDIESKYLNDIKAFLTENH-PD-SLLFPISALSGKNIDGLLEYIT 217
Query: 312 EQFK 315
+ K
Sbjct: 218 SKAK 221
>gi|171057288|ref|YP_001789637.1| GTP-binding protein Era [Leptothrix cholodnii SP-6]
gi|170774733|gb|ACB32872.1| GTP-binding protein Era [Leptothrix cholodnii SP-6]
Length = 348
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 9/163 (5%)
Query: 123 ERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVM 182
E +E + E+ + I+G PN GKS+++N ++G KV+ SRK TT H + G+
Sbjct: 40 EDDGDETAAIVHENPHCGLIAIVGRPNVGKSTLLNTLIGQKVSITSRKAQTTRHRITGIC 99
Query: 183 TKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSP-DS 241
T DTQ DTPG + + + +V L +V +V+F V P D+
Sbjct: 100 THGDTQFVFVDTPGFQTRHTNRGTSALNRNLNKTVQSV-LGDVDVVLFVVEAGRFGPDDA 158
Query: 242 RVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFK 284
+V+ L+ PP + +L NK+D+V ++ DL+ +Q +
Sbjct: 159 KVLALL-------PPGRPTLLVANKLDMVQRRADLMPWLQQMQ 194
>gi|421854665|ref|ZP_16287050.1| GTPase Era [Acinetobacter radioresistens DSM 6976 = NBRC 102413]
gi|403189680|dbj|GAB73251.1| GTPase Era [Acinetobacter radioresistens DSM 6976 = NBRC 102413]
Length = 342
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 93/171 (54%), Gaps = 10/171 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ +Q DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKSQAVYVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL V+F V H + + ++ +E++
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNL-----VLFAVDAHKWTQNDDLV--LEKLKNAEM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
P +L +NK+D + +K+ LL + ++ L + I S L+GA L+ L
Sbjct: 149 PV---ILVINKIDTIEEKRTLLPLIQERTKLMNFVEIVPVSALRGANLEHL 196
>gi|255027717|ref|ZP_05299703.1| GTP-binding protein Era [Listeria monocytogenes FSL J2-003]
Length = 301
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 94/174 (54%), Gaps = 17/174 (9%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N+++G K+A +S K TT ++V GV T ++QI DTPG
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPG- 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFE---VLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
++K + D V++ A+N F+ ++ V D D ++ ++ + Q
Sbjct: 65 -IHKPKHKLGDFMVKI-----ALNTFQEVDLIYFVIDASTGFGRGDEFIVEKLKNV--QT 116
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
P L +NK+DL+ +DL K+ EQ++ L ++ I S L+G + L +
Sbjct: 117 P----VFLLINKIDLIA-PEDLFKLIEQYRDLMDFDEIIPISALQGNNVPNLLE 165
>gi|160933320|ref|ZP_02080708.1| hypothetical protein CLOLEP_02165 [Clostridium leptum DSM 753]
gi|156867197|gb|EDO60569.1| ribosome biogenesis GTPase Era [Clostridium leptum DSM 753]
Length = 305
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 88/177 (49%), Gaps = 10/177 (5%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QKS + I+G PN GKSS++N M+G KVA VS K TT + GV+T+ +TQ+ DTPG
Sbjct: 7 QKSAFIAIVGRPNVGKSSLLNAMLGQKVAIVSSKPQTTRTRITGVLTQRETQLIFIDTPG 66
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
L+K D VR S +V + M+V + + + D +E M K
Sbjct: 67 --LHKPRTRLGDYMVR--SVTESVAGVDSCMLVAEAGKEIAPAD------LELMKKFKSL 116
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
VL +NK+DL+ K L++ +F ++ + S G G+ L L +Q
Sbjct: 117 SLPAVLAINKIDLLEDKSVLIRQITKFMEQFDFDAVVPVSAQTGDGVGGLVDELKKQ 173
>gi|91775217|ref|YP_544973.1| GTP-binding protein Era [Methylobacillus flagellatus KT]
gi|91775361|ref|YP_545117.1| GTP-binding protein Era [Methylobacillus flagellatus KT]
gi|91709204|gb|ABE49132.1| GTP-binding protein Era [Methylobacillus flagellatus KT]
gi|91709348|gb|ABE49276.1| GTP-binding protein Era [Methylobacillus flagellatus KT]
Length = 296
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 11/143 (7%)
Query: 141 AVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLN 200
V I+G PN GKS+++N+++G K++ SRK TT H +LG+ T DTQ DTPG
Sbjct: 11 TVAIVGRPNVGKSTLLNHILGLKLSITSRKAQTTRHRLLGIHTTEDTQFLFVDTPGFQQK 70
Query: 201 KSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKR 260
++++ V S V++ VL V+ + HL D +V++L+ P Q
Sbjct: 71 HINALNRNLNRTVTQVLSEVDV--VLFVIEPM--HLGDADRKVLQLL-------PKNQPV 119
Query: 261 VLCMNKVDLVTKKKDLLKVAEQF 283
L +NK DL+ K +LL + + F
Sbjct: 120 FLVVNKADLMGDKGNLLPLIQDF 142
>gi|212638693|ref|YP_002315213.1| GTPase [Anoxybacillus flavithermus WK1]
gi|212560173|gb|ACJ33228.1| GTPase [Anoxybacillus flavithermus WK1]
Length = 306
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 92/175 (52%), Gaps = 11/175 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
+E KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GV T D QI D
Sbjct: 7 QEGYKSGFVAIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTDDAQIIFID 66
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG ++K + D V+V A SA+ ++++ + + D + IER+ +
Sbjct: 67 TPG--IHKPKHKLGDFMVKV--AQSALQEVDLILFMVNAVEGFGRGDEFI---IERLKQV 119
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
P L +NK+D V DLL + EQ++ L + + S L+G ++ L Q
Sbjct: 120 QTPV---FLVINKIDEV-HPDDLLPLIEQYRSLHSFAEVIPISALQGNNVETLLQ 170
>gi|239501067|ref|ZP_04660377.1| GTP-binding protein Era [Acinetobacter baumannii AB900]
gi|421677758|ref|ZP_16117647.1| GTP-binding protein Era [Acinetobacter baumannii OIFC111]
gi|410392639|gb|EKP44996.1| GTP-binding protein Era [Acinetobacter baumannii OIFC111]
Length = 342
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ Q DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D H+ + D ++E++
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVIDAHKWTQNDD----LVLEKLKNADM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P +L +NK D K+++L + ++ L + I S L+GA L+ L++ +
Sbjct: 149 PV---ILVINKADTFGDKREILPLIQERAKLMNFAEIIPVSALRGANLEHLSETI 200
>gi|390167769|ref|ZP_10219749.1| GTPase Era [Sphingobium indicum B90A]
gi|389589634|gb|EIM67649.1| GTPase Era [Sphingobium indicum B90A]
Length = 302
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 11/176 (6%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
E E Q + I+GAPNAGKS+++N +VG KVA S K TT V+GV + + Q+
Sbjct: 2 EGSEVQQHCGVIAIVGAPNAGKSTLVNALVGQKVAITSPKAQTTRTRVMGVAIEGEAQMV 61
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM 250
+ DTPG+ + + V++AW +++ +V D L + ++
Sbjct: 62 LVDTPGIFQPRRRLD----RAMVQAAWGGAQGADLIALVVDGKAGLGAKMEPIV------ 111
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
G A +K+ L +NKVD+ K+K L+ ++ L E F+++ G GL L
Sbjct: 112 GALAARPEKKWLILNKVDIAIKEKLLVHTQRLYEQLDIAETFFVSAA-TGDGLPEL 166
>gi|73667167|ref|YP_303183.1| GTP-binding protein Era [Ehrlichia canis str. Jake]
gi|123614857|sp|Q3YRS0.1|ERA_EHRCJ RecName: Full=GTPase Era
gi|72394308|gb|AAZ68585.1| Small GTP-binding protein domain:GTP-binding protein Era [Ehrlichia
canis str. Jake]
Length = 296
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 11/177 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D+K I+G NAGKS++IN +VG KVAAV+ K TT + V+ + Q+ DTP
Sbjct: 5 DKKCSMNAIVGTTNAGKSTLINMLVGRKVAAVTPKVQTTRVRMHAVLNNENVQLIFIDTP 64
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K+ K K V+ AW ++ E ++++ DV +L ++I I++ A
Sbjct: 65 GIFSPKT----KLEKFIVKHAWMSLKGIENVILLLDVKNYLNKHIEKIISRIKQSNINA- 119
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
+L +NK+D+V++ + K E L + + F S L GL L YL E
Sbjct: 120 -----ILVVNKIDMVSQAL-VDKAIEYMYSLHNFSKTFTISALHDIGLNRLINYLCE 170
>gi|68171944|ref|ZP_00545257.1| Small GTP-binding protein domain:GTP-binding protein Era [Ehrlichia
chaffeensis str. Sapulpa]
gi|67998634|gb|EAM85374.1| Small GTP-binding protein domain:GTP-binding protein Era [Ehrlichia
chaffeensis str. Sapulpa]
Length = 296
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 85/171 (49%), Gaps = 13/171 (7%)
Query: 143 GIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKS 202
I+G NAGKS++IN +VG KVAAV+ K TT + V+ + Q+ DTPG+ K+
Sbjct: 12 AIVGTTNAGKSTLINMLVGQKVAAVTPKVQTTRVRMHAVLNNENVQLIFIDTPGIFSPKT 71
Query: 203 GYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVL 262
K K V+ AW ++ E ++++ DV +L R+I I++ A +L
Sbjct: 72 ----KLEKFIVKHAWMSLKGIENVILLLDVKNYLNKHIERIISRIKQSNINA------IL 121
Query: 263 CMNKVDLV-TKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
+NK+D V T D K E L + + F S L GL L YL E
Sbjct: 122 VVNKIDTVPTSSVD--KAIEHMYSLHSFSKTFTISALHDIGLSRLVDYLCE 170
>gi|452852836|ref|YP_007494520.1| GTP-binding protein era homolog [Desulfovibrio piezophilus]
gi|451896490|emb|CCH49369.1| GTP-binding protein era homolog [Desulfovibrio piezophilus]
Length = 302
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 14/179 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N +G KVA VS + TT + + G++T D QI DTPG+ +
Sbjct: 7 VALIGPPNAGKSTLMNQYLGQKVAIVSPRPQTTRNRISGILTNEDAQIVFLDTPGIHQLR 66
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSP---DSRVIRLIERMGKQAPPKQ 258
K + +ESAW+A+ +V++V+ D + + P D + L++ + + P
Sbjct: 67 G----KMNRFLLESAWNALAGSDVVVVLVDAGLYASKPHLLDKEIKPLVQPVAESGRPV- 121
Query: 259 KRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKDL 317
++ +NK+D V K +L V + L S L+G G TQ L+ + D
Sbjct: 122 --LVAVNKIDRVKDKPAMLPVMAKLGELWPEAEFIPVSALRGQG----TQELLARVLDF 174
>gi|15892081|ref|NP_359795.1| GTP-binding protein Era [Rickettsia conorii str. Malish 7]
gi|21263592|sp|Q92JA9.1|ERA_RICCN RecName: Full=GTPase Era
gi|15619203|gb|AAL02696.1| GTP-binding protein Era [Rickettsia conorii str. Malish 7]
Length = 339
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 99/184 (53%), Gaps = 14/184 (7%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
K +QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++
Sbjct: 46 KMSNQKTVSVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILY 105
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM-G 251
DTPG+ K K V AWS+++ ++++++ D L S D +++++
Sbjct: 106 DTPGIFEPKGSLE----KAMVRCAWSSLHSADLVLLIID---SLKSFDDITHNIVDKLRS 158
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
P + +NK+D+ +K + +K H P +F S L G + L +Y+
Sbjct: 159 LNIVP----IFLLNKIDIESKYLNDIKAFLTENH-PD-SLLFPISALSGKNIDGLLEYIT 212
Query: 312 EQFK 315
+ K
Sbjct: 213 SKAK 216
>gi|294460854|gb|ADE76000.1| unknown [Picea sitchensis]
Length = 324
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 96/179 (53%), Gaps = 8/179 (4%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D +S V ++G PN GKS+++N M+G K++ V+ K TT H +LG+ + D Q+ ++DTP
Sbjct: 132 DHRSGYVAVVGKPNVGKSTLLNQMIGQKLSIVTDKPQTTRHRILGLCSAPDYQMVLYDTP 191
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G++ + HK + +++ SA + ++ V DV R P+ +V L E G
Sbjct: 192 GVIQKE---MHKLDAMMMKNVHSATGNADCVLTVVDVCR---VPE-KVNDLFEEDGVDLK 244
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
K +L +NK DL+ K ++ K E ++ G + I S G G++ + +++ +
Sbjct: 245 KKPPTLLVLNKKDLM-KPGEIAKRMEWYEKFGGADHILSISAKYGHGVEDVKNWIVSKL 302
>gi|374318898|ref|YP_005065396.1| GTP-binding protein Era [Rickettsia slovaca 13-B]
gi|383750795|ref|YP_005425896.1| GTPase Era [Rickettsia slovaca str. D-CWPP]
gi|360041446|gb|AEV91828.1| GTP-binding protein Era [Rickettsia slovaca 13-B]
gi|379773809|gb|AFD19165.1| GTPase Era [Rickettsia slovaca str. D-CWPP]
Length = 339
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 99/184 (53%), Gaps = 14/184 (7%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
K +QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++
Sbjct: 46 KMSNQKTVSVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILY 105
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM-G 251
DTPG+ K K V AWS+++ ++++++ D L S D +++++
Sbjct: 106 DTPGIFEPKGSLE----KAMVRCAWSSLHSADLVLLIID---SLKSFDDITHNIVDKLRS 158
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
P + +NK+D+ +K + +K H P +F S L G + L +Y+
Sbjct: 159 LNIVP----IFLLNKIDIESKYLNDIKAFLTENH-PD-SLLFPISALSGKNIDGLLEYIT 212
Query: 312 EQFK 315
+ K
Sbjct: 213 SKAK 216
>gi|88607820|ref|YP_504957.1| GTP-binding protein Era [Anaplasma phagocytophilum HZ]
gi|88598883|gb|ABD44353.1| GTP-binding protein Era [Anaplasma phagocytophilum HZ]
Length = 305
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 97/179 (54%), Gaps = 11/179 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
K V ++G NAGKS++IN +VG K + V+ K +TT ++ V+ + + Q+ DTPG+
Sbjct: 18 KCSLVAVVGMTNAGKSTLINKLVGFKASIVTNKVHTTRVKMNSVLNEGNVQLVFTDTPGI 77
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ K K V++AW ++ +++++V D R + ++I+ ++R
Sbjct: 78 FSPKT----KLEKFIVKNAWMSMKGADMVILVLDAKRRICVHVEKIIKRLQR------DN 127
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
+ +NK+DL+ + +L AE+ + L ++R+F S L G G++ L YL E D
Sbjct: 128 VASIAVINKMDLL-DEGELATFAERVQLLHKFDRVFTVSSLYGTGVRDLIDYLQESACD 185
>gi|383483499|ref|YP_005392412.1| GTPase Era [Rickettsia parkeri str. Portsmouth]
gi|378935853|gb|AFC74353.1| GTPase Era [Rickettsia parkeri str. Portsmouth]
Length = 339
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 99/184 (53%), Gaps = 14/184 (7%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
K +QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++
Sbjct: 46 KMSNQKTVSVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILY 105
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM-G 251
DTPG+ K K V AWS+++ ++++++ D L S D +++++
Sbjct: 106 DTPGIFEPKGSLE----KAMVRCAWSSLHSADLVLLIID---SLKSFDDITHNIVDKLRS 158
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
P + +NK+D+ +K + +K H P +F S L G + L +Y+
Sbjct: 159 LNIVP----IFLLNKIDIESKYLNDIKAFLTENH-PD-SLLFPISALSGKNIDGLLEYIT 212
Query: 312 EQFK 315
+ K
Sbjct: 213 SKAK 216
>gi|34580888|ref|ZP_00142368.1| GTP-binding protein Era [Rickettsia sibirica 246]
gi|28262273|gb|EAA25777.1| GTP-binding protein Era [Rickettsia sibirica 246]
Length = 339
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 99/184 (53%), Gaps = 14/184 (7%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
K +QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++
Sbjct: 46 KMSNQKTVSVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILY 105
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM-G 251
DTPG+ K K V AWS+++ ++++++ D L S D +++++
Sbjct: 106 DTPGIFEPKGSLE----KAMVRCAWSSLHSADLVLLIID---SLKSFDDITHNIVDKLRS 158
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
P + +NK+D+ +K + +K H P +F S L G + L +Y+
Sbjct: 159 LNIVP----IFLLNKIDIESKYLNDIKAFLTENH-PD-SLLFPISALSGKNIDGLLEYIT 212
Query: 312 EQFK 315
+ K
Sbjct: 213 SKAK 216
>gi|449017899|dbj|BAM81301.1| GTP-binding protein of Era family [Cyanidioschyzon merolae strain
10D]
Length = 383
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 89/165 (53%), Gaps = 13/165 (7%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTK--ADTQICIFD 193
+ + V I+G N GKS+++N MVG+KVA VS K TT +V G+ + QI D
Sbjct: 72 ESRCCFVSILGPSNTGKSTLVNAMVGSKVAIVSPKVQTTRFQVRGIAIEETLHAQIVFID 131
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRH-----LTSPDSRVIRLIE 248
TPG+ L K + VK SAW A ++++V+ D +R+ L+ ++ + +
Sbjct: 132 TPGVFLPKRKFDQAMVK----SAWEASRGADIVLVMLDGNRYHHFRKLSHAETSIAERLS 187
Query: 249 RMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKH-LPGYERI 292
R+ K+ K +L +NK+DL+ +KDL V + H + G ERI
Sbjct: 188 RIDKEELAKTPILLAVNKIDLIP-RKDLDAVRDGLLHEMGGPERI 231
>gi|421660986|ref|ZP_16101168.1| GTP-binding protein Era [Acinetobacter baumannii Naval-83]
gi|408703595|gb|EKL48990.1| GTP-binding protein Era [Acinetobacter baumannii Naval-83]
Length = 342
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ Q DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D H+ + D ++E++
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVIDAHKWTQNDD----LVLEKLKNADM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P +L +NK D K+++L + ++ L + I S L+GA L+ L++ +
Sbjct: 149 PV---ILVINKADTFGDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETI 200
>gi|239909250|ref|YP_002955992.1| GTP-binding protein Era [Desulfovibrio magneticus RS-1]
gi|239799117|dbj|BAH78106.1| GTP-binding protein Era homolog [Desulfovibrio magneticus RS-1]
Length = 305
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 98/181 (54%), Gaps = 16/181 (8%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++G NAGKS+++N ++G K++ VS K TT + + G++T+ D Q DTPGL K
Sbjct: 10 VVMLGPTNAGKSTLLNRLIGQKISIVSPKPQTTRNSISGIITQGDLQAVFLDTPGLHRQK 69
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHL-----TSPDSRVIRLIERMGKQAPP 256
G + + + SA++A+ +V++++ D ++ +PD R I ++ +G P
Sbjct: 70 RGIA----PLLLRSAYAALGQADVVLLILDAAQYARRLDGLAPDLRPI--VKAVGDGRLP 123
Query: 257 KQKRVLCMNKVDLVTKKKDLLKV-AEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFK 315
++ +NK D+V +K LL V A + LP E +F S L G G+ L LM +
Sbjct: 124 V---LIALNKADVVREKARLLPVLAAVSEALPAAE-LFPISALTGLGVDDLLTALMSRLP 179
Query: 316 D 316
+
Sbjct: 180 E 180
>gi|169795097|ref|YP_001712890.1| GTP-binding protein Era [Acinetobacter baumannii AYE]
gi|213158241|ref|YP_002320292.1| GTP-binding protein Era [Acinetobacter baumannii AB0057]
gi|301345823|ref|ZP_07226564.1| GTP-binding protein Era [Acinetobacter baumannii AB056]
gi|301594765|ref|ZP_07239773.1| GTP-binding protein Era [Acinetobacter baumannii AB059]
gi|417564397|ref|ZP_12215271.1| GTP-binding protein Era [Acinetobacter baumannii OIFC143]
gi|421623148|ref|ZP_16064037.1| GTP-binding protein Era [Acinetobacter baumannii OIFC074]
gi|421643983|ref|ZP_16084471.1| GTP-binding protein Era [Acinetobacter baumannii IS-235]
gi|421647341|ref|ZP_16087758.1| GTP-binding protein Era [Acinetobacter baumannii IS-251]
gi|421649601|ref|ZP_16089992.1| GTP-binding protein Era [Acinetobacter baumannii OIFC0162]
gi|421673169|ref|ZP_16113113.1| GTP-binding protein Era [Acinetobacter baumannii OIFC065]
gi|421689888|ref|ZP_16129561.1| GTP-binding protein Era [Acinetobacter baumannii IS-116]
gi|421695489|ref|ZP_16135096.1| GTP-binding protein Era [Acinetobacter baumannii WC-692]
gi|421700657|ref|ZP_16140170.1| GTP-binding protein Era [Acinetobacter baumannii IS-58]
gi|421794820|ref|ZP_16230911.1| GTP-binding protein Era [Acinetobacter baumannii Naval-21]
gi|421806840|ref|ZP_16242702.1| GTP-binding protein Era [Acinetobacter baumannii OIFC035]
gi|424059033|ref|ZP_17796524.1| GTP-binding protein Era [Acinetobacter baumannii Ab33333]
gi|425749746|ref|ZP_18867713.1| GTP-binding protein Era [Acinetobacter baumannii WC-348]
gi|445405987|ref|ZP_21431582.1| GTP-binding protein Era [Acinetobacter baumannii Naval-57]
gi|445447123|ref|ZP_21443610.1| GTP-binding protein Era [Acinetobacter baumannii WC-A-92]
gi|445459978|ref|ZP_21447887.1| GTP-binding protein Era [Acinetobacter baumannii OIFC047]
gi|445490470|ref|ZP_21459183.1| GTP-binding protein Era [Acinetobacter baumannii AA-014]
gi|169148024|emb|CAM85887.1| GTP-binding protein,16S rRNA-binding,ribosome-associated GTPase
[Acinetobacter baumannii AYE]
gi|193078015|gb|ABO12935.2| GTP-binding protein16S rRNA-binding,ribosome-associated GTPase
[Acinetobacter baumannii ATCC 17978]
gi|213057401|gb|ACJ42303.1| GTP-binding protein Era [Acinetobacter baumannii AB0057]
gi|395556153|gb|EJG22154.1| GTP-binding protein Era [Acinetobacter baumannii OIFC143]
gi|404565392|gb|EKA70560.1| GTP-binding protein Era [Acinetobacter baumannii IS-116]
gi|404565820|gb|EKA70983.1| GTP-binding protein Era [Acinetobacter baumannii WC-692]
gi|404569308|gb|EKA74395.1| GTP-binding protein Era [Acinetobacter baumannii IS-58]
gi|404669771|gb|EKB37663.1| GTP-binding protein Era [Acinetobacter baumannii Ab33333]
gi|408506658|gb|EKK08364.1| GTP-binding protein Era [Acinetobacter baumannii IS-235]
gi|408513605|gb|EKK15223.1| GTP-binding protein Era [Acinetobacter baumannii OIFC0162]
gi|408516446|gb|EKK18019.1| GTP-binding protein Era [Acinetobacter baumannii IS-251]
gi|408693757|gb|EKL39355.1| GTP-binding protein Era [Acinetobacter baumannii OIFC074]
gi|410386988|gb|EKP39448.1| GTP-binding protein Era [Acinetobacter baumannii OIFC065]
gi|410402757|gb|EKP54862.1| GTP-binding protein Era [Acinetobacter baumannii Naval-21]
gi|410417383|gb|EKP69153.1| GTP-binding protein Era [Acinetobacter baumannii OIFC035]
gi|425487148|gb|EKU53506.1| GTP-binding protein Era [Acinetobacter baumannii WC-348]
gi|444759351|gb|ELW83821.1| GTP-binding protein Era [Acinetobacter baumannii WC-A-92]
gi|444765733|gb|ELW90022.1| GTP-binding protein Era [Acinetobacter baumannii AA-014]
gi|444773213|gb|ELW97309.1| GTP-binding protein Era [Acinetobacter baumannii OIFC047]
gi|444781765|gb|ELX05680.1| GTP-binding protein Era [Acinetobacter baumannii Naval-57]
Length = 342
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ Q DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D H+ + D ++E++
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVIDAHKWTQNDD----LVLEKLKNADM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P +L +NK D K+++L + ++ L + I S L+GA L+ L++ +
Sbjct: 149 PV---ILVINKADTFGDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETI 200
>gi|85373794|ref|YP_457856.1| GTP-binding protein Era [Erythrobacter litoralis HTCC2594]
gi|122544698|sp|Q2NB82.1|ERA_ERYLH RecName: Full=GTPase Era
gi|84786877|gb|ABC63059.1| GTPase [Erythrobacter litoralis HTCC2594]
Length = 304
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 21/184 (11%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMT----KADTQI 189
E+ K V ++GAPNAGKS+++N +VG KVA S K TT +LG+ A TQ+
Sbjct: 3 EKISKCGVVAVLGAPNAGKSTLVNQLVGQKVAITSAKAQTTRARMLGIALHESDDAKTQM 62
Query: 190 CIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDV---HRHLTSPDSRVIRL 246
+ DTPG+ + + V +AW + ++++ D RH P L
Sbjct: 63 ILVDTPGIFAPRRRLD----RAMVSAAWEGAESADAVLLLVDPVKQRRHELEP------L 112
Query: 247 IERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
+E + K P ++++L +NKVD V KK+ LL +A+ + I+ S L G G+ +
Sbjct: 113 LESL-KDRP--ERKILVLNKVD-VAKKEPLLALAQDLSQKVDFAEIYFVSALTGDGVPEM 168
Query: 307 TQYL 310
L
Sbjct: 169 KNAL 172
>gi|299769158|ref|YP_003731184.1| GTP-binding protein Era [Acinetobacter oleivorans DR1]
gi|298699246|gb|ADI89811.1| GTP-binding protein Era [Acinetobacter oleivorans DR1]
Length = 342
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ Q DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D ++ + D ++E++
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVIDAYKWTQNDD----LVLEKLKNAEM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P +L +NK D K+D+L + ++ L + I S L+GA L+ L++ +
Sbjct: 149 PV---ILVINKADTFEDKRDILPLIQERAKLMNFAEIVPVSALRGANLEHLSETI 200
>gi|116333398|ref|YP_794925.1| GTPase [Lactobacillus brevis ATCC 367]
gi|116098745|gb|ABJ63894.1| GTPase [Lactobacillus brevis ATCC 367]
Length = 301
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 11/179 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+ +N ++G K+A +S TT +++ G+ T + QI DTP
Sbjct: 5 DYKSGFVAIVGRPNVGKSTFLNRVIGQKIAIMSNTAQTTRNKIQGIYTTDEAQIVFIDTP 64
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ KS K V+SA SA+N + ++ + + + D+ +I ++ +
Sbjct: 65 GVHKPKS----KLGDYMVQSAMSALNEVDAVLFMVNAAEKRGAGDNFIIDRLKNV----- 115
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
K L +NK+D V K DLL V EQ++ ++ ++ S L+G + L L+EQ
Sbjct: 116 -KAPVYLLINKIDQV-KPDDLLPVMEQYQTALPWKAVYPISALEGNNVDELLTGLVEQM 172
>gi|91794116|ref|YP_563767.1| GTP-binding protein Era [Shewanella denitrificans OS217]
gi|91716118|gb|ABE56044.1| GTP-binding protein Era [Shewanella denitrificans OS217]
Length = 334
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 91/165 (55%), Gaps = 8/165 (4%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N ++G KV+ S+K TT H ++G+ T +Q+ DTPGL +++
Sbjct: 43 VAIVGRPNVGKSTLLNKLLGQKVSITSKKPQTTRHRIMGIHTDGPSQVVFIDTPGLHIDE 102
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ R+ + +A +L +V MV+F V +PD ++ ++++G + ++K V
Sbjct: 103 QRAIN-----RLMNRAAASSLADVSMVIFVVDAMNWTPDDEMV--LKKIG-YSDQERKVV 154
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
L +NKVD + K+ L + ++ I S KG ++ +
Sbjct: 155 LAINKVDNIKDKEALFPYLNEIAKKFNFDEILPISATKGTNIQRI 199
>gi|261253899|ref|ZP_05946472.1| GTP-binding protein Era [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417954581|ref|ZP_12597614.1| GTPase Era [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|260937290|gb|EEX93279.1| GTP-binding protein Era [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342815127|gb|EGU50054.1| GTPase Era [Vibrio orientalis CIP 102891 = ATCC 33934]
Length = 325
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 12/187 (6%)
Query: 129 EEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQ 188
E+ E+Q V I+G PN GKS+++N ++G K++ SRK TT H ++GV T+ D Q
Sbjct: 21 EQATSPENQHCGFVAIVGRPNVGKSTLLNRILGQKISITSRKPQTTRHRIMGVDTEGDYQ 80
Query: 189 ICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLI 247
DTPGL + + ++ + S+ S VNL V F V H T+ D V +
Sbjct: 81 AIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNL-----VFFLVDGTHWTADDEMV---L 132
Query: 248 ERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALT 307
++ K P VLC+NKVD+V + D++ ++ + + S G + L
Sbjct: 133 TKLQKSNFPV---VLCVNKVDVVQDRNDVMMHMQEMSSKMDFVDVVPISAKHGKNIDVLR 189
Query: 308 QYLMEQF 314
+++ E
Sbjct: 190 KHVREHL 196
>gi|332851054|ref|ZP_08433163.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6013150]
gi|332869697|ref|ZP_08438885.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6013113]
gi|332730218|gb|EGJ61543.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6013150]
gi|332732599|gb|EGJ63832.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6013113]
Length = 340
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ Q DTP
Sbjct: 34 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 93
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D H+ + D ++E++
Sbjct: 94 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVIDAHKWTQNDD----LVLEKLKNADM 146
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P +L +NK D K+++L + ++ L + I S L+GA L+ L++ +
Sbjct: 147 PV---ILVINKADTFGDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETI 198
>gi|417549647|ref|ZP_12200727.1| GTP-binding protein Era [Acinetobacter baumannii Naval-18]
gi|421626604|ref|ZP_16067433.1| GTP-binding protein Era [Acinetobacter baumannii OIFC098]
gi|400387615|gb|EJP50688.1| GTP-binding protein Era [Acinetobacter baumannii Naval-18]
gi|408695875|gb|EKL41430.1| GTP-binding protein Era [Acinetobacter baumannii OIFC098]
Length = 342
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ Q DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D H+ + D ++E++
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVIDAHKWTQNDD----LVLEKLKNADM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P +L +NK D K+++L + ++ L + I S L+GA L+ L++ +
Sbjct: 149 PV---ILVINKADTFGDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETI 200
>gi|242373872|ref|ZP_04819446.1| GTP-binding protein Era [Staphylococcus epidermidis M23864:W1]
gi|242348426|gb|EES40028.1| GTP-binding protein Era [Staphylococcus epidermidis M23864:W1]
Length = 300
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 96/182 (52%), Gaps = 15/182 (8%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DT
Sbjct: 3 EEHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDT 62
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG ++K + D +RV A + ++ + +M + +V+ + D ++ +++ +
Sbjct: 63 PG--IHKPKHKLGDYMMRV--AKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNV---- 114
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYL 310
K L +NK+DLV + K+ EQ+K + I S L+G + L YL
Sbjct: 115 --KTPIFLVLNKIDLVHPDALMPKI-EQYKEYMDFTDIIPISALEGLNVDHFIDVLKSYL 171
Query: 311 ME 312
E
Sbjct: 172 PE 173
>gi|221641175|ref|YP_002527437.1| GTP-binding protein Era [Rhodobacter sphaeroides KD131]
gi|221161956|gb|ACM02936.1| GTP-binding protein Era [Rhodobacter sphaeroides KD131]
Length = 295
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 8/169 (4%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ +IG PNAGKS+++N MVG KV+ V+ K TT + GV + QI DTPGL +
Sbjct: 1 MALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGQAQIVFVDTPGLFRPR 60
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW +V++++ + HR LT + I+ M + P Q
Sbjct: 61 RRLD----RAMVAAAWGGAADADVIVLLVEAHRGLTEGTQAI---IDAMRDRIPQGQTVA 113
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V K + LL +A++ + FM S KG G++ L ++L
Sbjct: 114 LAINKIDRV-KAEVLLGLAQELNGAFPFAETFMISAEKGHGVEKLRRWL 161
>gi|336312391|ref|ZP_08567340.1| GTP-binding protein Era [Shewanella sp. HN-41]
gi|335863897|gb|EGM69015.1| GTP-binding protein Era [Shewanella sp. HN-41]
Length = 308
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIG PN GKS+++N ++G K++ S+K TT H ++G+ T QI DTPGL + +
Sbjct: 48 VAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPKQIVFIDTPGLHIEE 107
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAPPKQKR 260
+ R+ + +A +L +V MV+F V T+ D V+ + R G++ +K
Sbjct: 108 QRAIN-----RLMNRAAASSLADVSMVIFVVDGMTWTADDEMVLSKLRRGGEE----RKT 158
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
+L +NKVD + K+ L E+ ++ I S KG +K + +
Sbjct: 159 ILAINKVDNIKDKEALFPYLEEVAKKYPFDEILPISASKGTNVKRILE 206
>gi|449673729|ref|XP_002155788.2| PREDICTED: GTPase Era, mitochondrial-like [Hydra magnipapillata]
Length = 321
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 21/196 (10%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
DQK + V I+GAPNAGKS++IN VG++V+AVS +TT G+ + QI DTP
Sbjct: 17 DQKVLKVAILGAPNAGKSTLINAAVGSRVSAVSEIKHTTRTVANGIKNIGNCQIIFTDTP 76
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSP--DSRVIRLIERMGKQ 253
G++ + G+ + + ++L ++ DV T D +I ++ +
Sbjct: 77 GIVSFEEGHRLNMDRAHLRGPRRVAGSADMLAIITDVASKKTRNFIDENIIEIMNS-NLE 135
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQF-----KHLPGY---------ERIFMTSGLK 299
P +L +NK+DL+ +K+DL+ VA K + GY ++ FM S
Sbjct: 136 VPA----ILILNKIDLLKRKEDLIPVASMLMQKRTKDVWGYHSYGGSERFQKCFMISAFS 191
Query: 300 GAGLKALTQYLMEQFK 315
G G+ L YL+ K
Sbjct: 192 GDGVDDLLDYLVASSK 207
>gi|383482965|ref|YP_005391879.1| GTPase Era [Rickettsia montanensis str. OSU 85-930]
gi|378935319|gb|AFC73820.1| GTPase Era [Rickettsia montanensis str. OSU 85-930]
Length = 343
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 99/184 (53%), Gaps = 14/184 (7%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
K +QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++
Sbjct: 50 KMSNQKTVSVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILY 109
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM-G 251
DTPG+ K K V AWS+++ ++++++ D L S D +++++
Sbjct: 110 DTPGIFEPKGSLE----KAMVRCAWSSLHSADLVLLIID---SLKSFDDITHNILDKLRS 162
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
P + +NK+D+ +K + +K H P +F S L G + L +Y+
Sbjct: 163 LNIVP----IFLLNKIDIESKYLNDIKAFLTENH-PD-SLLFPISALSGKNIDGLLEYIT 216
Query: 312 EQFK 315
+ K
Sbjct: 217 SKAK 220
>gi|406670953|ref|ZP_11078198.1| GTP-binding protein Era [Facklamia hominis CCUG 36813]
gi|405582469|gb|EKB56475.1| GTP-binding protein Era [Facklamia hominis CCUG 36813]
Length = 306
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 11/179 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D S V ++G PN GKS+++N +VG K+A +S K TT + + GV T+ QI DTP
Sbjct: 10 DYHSGFVALVGRPNVGKSTLLNQIVGQKIAIMSDKAQTTRNRIQGVYTREQAQIVFIDTP 69
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K H+ + V++A+SA+N + + V+ + + D VI K
Sbjct: 70 GIHKPK----HELGEFMVKTAYSALNGVDAICVLVNASEKMGPGDQFVI------DKVRE 119
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
K L +NK+DL+ DLL + E ++ L +E + S +G ++AL L+ +
Sbjct: 120 AKVPVFLVVNKIDLI-HPDDLLPLIESYQALFNFEAVIPISAKEGINIQALLDTLVAKM 177
>gi|157964182|ref|YP_001499006.1| GTP-binding protein Era [Rickettsia massiliae MTU5]
gi|157843958|gb|ABV84459.1| GTP-binding protein Era [Rickettsia massiliae MTU5]
Length = 347
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 99/184 (53%), Gaps = 14/184 (7%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
K +QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++
Sbjct: 54 KMSNQKTVSVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILY 113
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM-G 251
DTPG+ K K V AWS+++ ++++++ D L S D +++++
Sbjct: 114 DTPGIFEPKGSLE----KAMVRCAWSSLHSADLVLLIID---SLKSFDDITHNILDKLRS 166
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
P + +NK+D+ +K + +K H P +F S L G + L +Y+
Sbjct: 167 LNIVP----IFLLNKIDIESKYLNDIKAFLTENH-PD-SLLFPISALSGKNIDGLLEYIT 220
Query: 312 EQFK 315
+ K
Sbjct: 221 SKAK 224
>gi|379713231|ref|YP_005301569.1| GTPase Era [Rickettsia massiliae str. AZT80]
gi|383481097|ref|YP_005390012.1| GTPase Era [Rickettsia rhipicephali str. 3-7-female6-CWPP]
gi|376333877|gb|AFB31109.1| GTPase Era [Rickettsia massiliae str. AZT80]
gi|378933436|gb|AFC71939.1| GTPase Era [Rickettsia rhipicephali str. 3-7-female6-CWPP]
Length = 343
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 99/184 (53%), Gaps = 14/184 (7%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
K +QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++
Sbjct: 50 KMSNQKTVSVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILY 109
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM-G 251
DTPG+ K K V AWS+++ ++++++ D L S D +++++
Sbjct: 110 DTPGIFEPKGSLE----KAMVRCAWSSLHSADLVLLIID---SLKSFDDITHNILDKLRS 162
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
P + +NK+D+ +K + +K H P +F S L G + L +Y+
Sbjct: 163 LNIVP----IFLLNKIDIESKYLNDIKAFLTENH-PD-SLLFPISALSGKNIDGLLEYIT 216
Query: 312 EQFK 315
+ K
Sbjct: 217 SKAK 220
>gi|304321234|ref|YP_003854877.1| GTP-binding protein Era [Parvularcula bermudensis HTCC2503]
gi|303300136|gb|ADM09735.1| GTP-binding protein Era [Parvularcula bermudensis HTCC2503]
Length = 324
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 92/185 (49%), Gaps = 20/185 (10%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++GAPNAGKS+ +N MVG KV+ V+ K TT + G+ TQ+ DTPG+ + +
Sbjct: 13 VTVLGAPNAGKSTFVNQMVGAKVSIVTHKVQTTRTRIRGIAMAERTQMVFVDTPGIFVPR 72
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHL-------TSPDSR-----VIRLIER 249
+ V +AW + +V +++ D +L P SR ++ R
Sbjct: 73 RTLD----RAMVAAAWEGTDGADVTLLLVDAPAYLAMVNEDTADPASRRSAEDTDGIVAR 128
Query: 250 MGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQY 309
+ K+A QK VL +NK+D + + LL +AE + FM S K G + L Q+
Sbjct: 129 L-KEA--GQKAVLVLNKIDRMPRPP-LLLLAETLNQEGVFTDTFMISAKKDLGTEGLRQF 184
Query: 310 LMEQF 314
L+E+
Sbjct: 185 LIERM 189
>gi|118586863|ref|ZP_01544297.1| GTP-binding protein Era [Oenococcus oeni ATCC BAA-1163]
gi|118432695|gb|EAV39427.1| GTP-binding protein Era [Oenococcus oeni ATCC BAA-1163]
Length = 309
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 96/186 (51%), Gaps = 10/186 (5%)
Query: 130 EEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQI 189
E + + + KS V IIG PN GKS+++NY++G KVA +S K TT +++ G+ T + Q+
Sbjct: 2 ENILDNEYKSGFVAIIGRPNVGKSTLLNYIIGQKVAIISSKAQTTRNKIAGIYTTEEAQV 61
Query: 190 CIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIER 249
DTPG+ Y+ D + ++++ A+N + + V D D+ +I +++
Sbjct: 62 VFLDTPGI---HKPYNSLDEYME-KASFGALNEADAVWFVVDATEKRGGGDNFIIERLKK 117
Query: 250 MGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFK-HLPGYERIFMTSGLKGAGLKALTQ 308
+ K P L +NK+DL+ KK DL + + + ++ S G + AL
Sbjct: 118 I-KNTPI----YLLVNKIDLIKKKNDLFQAISSYTVDSLDWSEVYPISAKSGEQVNALVD 172
Query: 309 YLMEQF 314
++E+
Sbjct: 173 DVIEKL 178
>gi|229586356|ref|YP_002844857.1| GTP-binding protein Era [Rickettsia africae ESF-5]
gi|228021406|gb|ACP53114.1| GTP-binding protein Era [Rickettsia africae ESF-5]
Length = 339
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 99/184 (53%), Gaps = 14/184 (7%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
K +QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++
Sbjct: 46 KMPNQKTVSVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILY 105
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM-G 251
DTPG+ K K V AWS+++ ++++++ D L S D +++++
Sbjct: 106 DTPGIFEPKGSLE----KAMVRCAWSSLHSADLVLLIID---SLKSFDDITHNIVDKLRS 158
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
P + +NK+D+ +K + +K H P +F S L G + L +Y+
Sbjct: 159 LNIVP----IFLLNKIDIESKYLNDIKAFLTENH-PD-SLLFPISALSGKNIDGLLEYIT 212
Query: 312 EQFK 315
+ K
Sbjct: 213 SKAK 216
>gi|302342153|ref|YP_003806682.1| GTP-binding protein Era [Desulfarculus baarsii DSM 2075]
gi|301638766|gb|ADK84088.1| GTP-binding protein Era [Desulfarculus baarsii DSM 2075]
Length = 296
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 87/173 (50%), Gaps = 18/173 (10%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PNAGKS+ +N+++G K+A S K TT H +LGV + ++QI DTPGL
Sbjct: 6 VAIVGPPNAGKSTFLNHVLGFKLAITSDKPQTTRHRLLGVCNREESQIVFLDTPGL---- 61
Query: 202 SGYSHKDV----KVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
HK + K+ V +A +A+ E ++ + + + RV G A K
Sbjct: 62 ----HKPMRALNKLMVRTAMAALQDVEAVLFMVEASAKGLAEGQRV------AGMLAEAK 111
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ V+ +NK+DLV K LL + E+ + I S KG G A+ + L
Sbjct: 112 KPVVVALNKIDLVRDKAALLPMLERVAGWAEWAAIVPLSAAKGDGAAAVLREL 164
>gi|149192068|ref|ZP_01870293.1| GTP-binding protein Era [Vibrio shilonii AK1]
gi|148834093|gb|EDL51105.1| GTP-binding protein Era [Vibrio shilonii AK1]
Length = 329
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 89/186 (47%), Gaps = 10/186 (5%)
Query: 129 EEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQ 188
E E+Q V I+G PN GKS+++N+++G K++ SRK TT H ++GV T D Q
Sbjct: 22 EATTSAENQHCGFVAIVGRPNVGKSTLLNHILGQKISITSRKPQTTRHRIMGVDTDGDYQ 81
Query: 189 ICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIE 248
DTPGL + + ++ + S+ S VNL VL +V H T D V +
Sbjct: 82 AIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNL--VLFLVDGT--HWTDDDEMV---LN 134
Query: 249 RMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
++ K P +LCMNKVD V + D++ + + + S G L +
Sbjct: 135 KLRKSDFPV---ILCMNKVDNVKDRNDVMLHMHELSKKMDFVDVVPISAKHGKNTDVLRK 191
Query: 309 YLMEQF 314
++ E
Sbjct: 192 HVREHL 197
>gi|121610178|ref|YP_997985.1| GTP-binding protein Era [Verminephrobacter eiseniae EF01-2]
gi|121554818|gb|ABM58967.1| GTP-binding protein Era [Verminephrobacter eiseniae EF01-2]
Length = 340
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 13/141 (9%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
Q+ A+ I+G PN GKS+++N +VG K++ SRK TT H + G+ T+A TQ DTPG
Sbjct: 45 QRCGAIAIVGKPNVGKSTLLNALVGQKISITSRKAQTTRHRITGICTRAQTQFVFVDTPG 104
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHR-HLTSPDSRVIRLIERMGKQAP 255
+ +K + V A L +V +++F V + T D++V+ L +
Sbjct: 105 FQTRHANALNKSLNKAVVGA-----LGDVSLILFVVEAGNFTLADAKVLSLFK------- 152
Query: 256 PKQKRVLCMNKVDLVTKKKDL 276
P +L NK+DLV ++ D+
Sbjct: 153 PGVATLLLANKLDLVPRRADI 173
>gi|218288620|ref|ZP_03492897.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius LAA1]
gi|218241277|gb|EED08452.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius LAA1]
Length = 298
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V +IG PN GKS+++N +VG KVA +S + TT + + GV T +Q+ DTPG+
Sbjct: 4 KSGFVALIGRPNVGKSTLLNALVGQKVAIMSNRPQTTRNRIRGVRTTETSQMIFIDTPGI 63
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K H+ + V++A +N +V+++V D + + + + +ER+ +
Sbjct: 64 HKPK----HRLGEYMVDAALKTLNEVDVIVLVVDASSPVHPTEEEIAKQLERV------R 113
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+L +NKVD + + +LK E+++ L +E S LKG + L + +
Sbjct: 114 TPVILALNKVDALDDRALVLKRIEEYQALRPFEEYVPISALKGEQVDLLAELI 166
>gi|91088419|ref|XP_966917.1| PREDICTED: similar to CG7488 CG7488-PA [Tribolium castaneum]
gi|270011756|gb|EFA08204.1| hypothetical protein TcasGA2_TC005831 [Tribolium castaneum]
Length = 336
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 28/201 (13%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
K + V +IG PN GKS+ IN ++ KV S K +TT + + T+ D+QI DTPGL
Sbjct: 33 KVLKVAVIGVPNVGKSTFINNLMDRKVCPASSKVHTTRAKSQAIFTEGDSQIVFLDTPGL 92
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSP--DSRVIRLIERMGKQAP 255
+ + K ++ + S++ +++ V+ D T D +VIRL+E K P
Sbjct: 93 VSFQEYKKFSLEKSFLKDSKSSLREADIIGVIHDASNIWTREKLDIKVIRLLED-NKTKP 151
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQF---------------------KHLPGYERIFM 294
L +NKVD++ K+ LL V Q + P + +FM
Sbjct: 152 ----SFLVLNKVDIIKSKRKLLDVTRQLTENCIEGAPIPGGKPLRDKETRGWPHFSDVFM 207
Query: 295 TSGLKGAGLKALTQYLMEQFK 315
S L G+GL + YL+ K
Sbjct: 208 VSALTGSGLDEVKNYLIRNAK 228
>gi|410925878|ref|XP_003976406.1| PREDICTED: GTPase Era, mitochondrial-like [Takifugu rubripes]
Length = 442
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 83/144 (57%), Gaps = 8/144 (5%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
K + V IIG+PNAGKS++ N ++G KV AVS+K +TT + +GV+T+ DTQI + DTPGL
Sbjct: 99 KVLKVAIIGSPNAGKSTLSNQLLGRKVFAVSKKVHTTRNRAMGVLTEGDTQIVLLDTPGL 158
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDV-HRHLTS-PDSRVIRLIERMGKQAP 255
S + K + W+ V ++++V+ DV R + S D V++ + +
Sbjct: 159 T-TVSKVKRQLEKSLLVDPWNTVKEADLMVVMVDVADRWMCSRLDFEVLKCLAQH----- 212
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKV 279
P +L +NKVD V K LL +
Sbjct: 213 PDTPAILVLNKVDKVKAKDRLLDI 236
>gi|326203513|ref|ZP_08193377.1| GTP-binding protein Era [Clostridium papyrosolvens DSM 2782]
gi|325986333|gb|EGD47165.1| GTP-binding protein Era [Clostridium papyrosolvens DSM 2782]
Length = 298
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V +IG PN GKS+++N + G K+A +S K TT + + GV+T + Q+ + DTPG+
Sbjct: 4 KSGFVSVIGRPNVGKSTLLNTITGQKIAIMSDKPQTTRNTIRGVITNKECQLILIDTPGI 63
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ V V E+ + EV +V+F V + P ++ I +I+++ + P
Sbjct: 64 HKPKTKLGEYMVNVASET------IKEVDLVLFLVEAN-AQPGAQDINIIQQLKQVKTP- 115
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGL 303
L +NKVDLV+K+K LL + + + L ++ I S LK G+
Sbjct: 116 --VFLILNKVDLVSKEK-LLAIIDSYSKLMNFKAIIPISALKNDGI 158
>gi|152999779|ref|YP_001365460.1| GTP-binding protein Era [Shewanella baltica OS185]
gi|151364397|gb|ABS07397.1| GTP-binding protein Era [Shewanella baltica OS185]
Length = 338
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIG PN GKS++IN ++G KV+ S+K TT H ++G+ T QI DTPGL + +
Sbjct: 47 VAIIGRPNVGKSTLINRLLGQKVSITSKKPQTTRHRIMGIHTDGPKQIVFIDTPGLHIEE 106
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAPPKQKR 260
+ R+ + +A +L +V MV+F V T+ D V+ + R G++ ++
Sbjct: 107 QRAIN-----RLMNRAAASSLADVAMVIFVVDGMTWTADDEMVLSKLRRGGEE----RQT 157
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
+L +NKVD + K+ L E+ ++ I S KG ++ + +
Sbjct: 158 ILAINKVDNIKDKESLFPYLEEVAKKYPFDEILPISASKGTNVQRILE 205
>gi|220928031|ref|YP_002504940.1| GTP-binding protein Era [Clostridium cellulolyticum H10]
gi|254783293|sp|B8I736.1|ERA_CLOCE RecName: Full=GTPase Era
gi|219998359|gb|ACL74960.1| GTP-binding protein Era [Clostridium cellulolyticum H10]
Length = 298
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V +IG PN GKS+++N + G K+A +S K TT + + GV+T + Q+ + DTPG+
Sbjct: 4 KSGFVSVIGRPNVGKSTLLNTITGQKIAIMSNKPQTTRNTIRGVITNKECQLILIDTPGI 63
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ V V E+ + EV +++F V + T P ++ + +I+++ + P
Sbjct: 64 HKPKTKLGEYMVNVASET------IKEVDLILFLVEAN-TQPGAQDVNIIQQLKQIKTP- 115
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGL 303
L +NKVDL++K K LL + + + L ++ I S LK G+
Sbjct: 116 --VFLILNKVDLISKDK-LLAIIDSYSKLMDFKAIIPISALKNDGI 158
>gi|260576289|ref|ZP_05844281.1| GTP-binding protein Era [Rhodobacter sp. SW2]
gi|259021557|gb|EEW24861.1| GTP-binding protein Era [Rhodobacter sp. SW2]
Length = 314
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 87/175 (49%), Gaps = 8/175 (4%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N MVG KV+ V+ K TT + GV + QI DTPGL +
Sbjct: 20 VALIGEPNAGKSTLLNKMVGAKVSIVTHKVQTTRARIRGVAMEGAAQIVFVDTPGLFRPR 79
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW +V++++ + HR LT + I+ M + P Q
Sbjct: 80 RRLD----RAMVAAAWGGAADADVVVLLIEAHRGLTEGTKAI---IDAMRDRIPRGQTVA 132
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
L +NK+D V K + LL ++ Q + FM S KG G+ L +L Q +
Sbjct: 133 LAINKIDRV-KAEVLLGLSAQMNEAFPFAETFMISAEKGYGVDKLKAWLATQLPE 186
>gi|217974268|ref|YP_002359019.1| GTP-binding protein Era [Shewanella baltica OS223]
gi|373948649|ref|ZP_09608610.1| GTP-binding protein Era [Shewanella baltica OS183]
gi|386325509|ref|YP_006021626.1| GTP-binding protein Era [Shewanella baltica BA175]
gi|217499403|gb|ACK47596.1| GTP-binding protein Era [Shewanella baltica OS223]
gi|333819654|gb|AEG12320.1| GTP-binding protein Era [Shewanella baltica BA175]
gi|373885249|gb|EHQ14141.1| GTP-binding protein Era [Shewanella baltica OS183]
Length = 338
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIG PN GKS++IN ++G KV+ S+K TT H ++G+ T QI DTPGL + +
Sbjct: 47 VAIIGRPNVGKSTLINRLLGQKVSITSKKPQTTRHRIMGIHTDGPKQIVFIDTPGLHIEE 106
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAPPKQKR 260
+ R+ + +A +L +V MV+F V T+ D V+ + R G++ ++
Sbjct: 107 QRAIN-----RLMNRAAASSLADVAMVIFVVDGMTWTADDEMVLSKLRRGGEE----RQT 157
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
+L +NKVD + K+ L E+ ++ I S KG ++ + +
Sbjct: 158 ILAINKVDNIKDKESLFPYLEEVAKKYPFDEILPISASKGTNVQRILE 205
>gi|312110184|ref|YP_003988500.1| GTP-binding protein Era [Geobacillus sp. Y4.1MC1]
gi|336234648|ref|YP_004587264.1| GTP-binding protein Era [Geobacillus thermoglucosidasius C56-YS93]
gi|423719218|ref|ZP_17693400.1| GTP-binding protein era [Geobacillus thermoglucosidans TNO-09.020]
gi|311215285|gb|ADP73889.1| GTP-binding protein Era [Geobacillus sp. Y4.1MC1]
gi|335361503|gb|AEH47183.1| GTP-binding protein Era [Geobacillus thermoglucosidasius C56-YS93]
gi|383368121|gb|EID45396.1| GTP-binding protein era [Geobacillus thermoglucosidans TNO-09.020]
Length = 302
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 95/177 (53%), Gaps = 11/177 (6%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
+ +E KS V I+G PN GKS+ +N ++G K+A +S K TT +++ GV T D QI
Sbjct: 1 MNKEGYKSGFVSIVGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTDDAQIIF 60
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMG 251
DTPG ++K + D ++V A +A+ ++++ + + D+ + IER+
Sbjct: 61 IDTPG--MHKPKHKLGDFMMKV--ALNALKEVDLILFMINAEEGFGRGDAYI---IERLK 113
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
+ P L +NK+DLV DLL + +++K L + I S L+G ++ L +
Sbjct: 114 EVNTPV---FLVINKIDLV-HPNDLLPLIDRYKELYPFAEIIPISALQGNNIETLVE 166
>gi|24372927|ref|NP_716969.1| 30S ribosome assembly GTPase Era [Shewanella oneidensis MR-1]
gi|24347063|gb|AAN54414.1| 30S ribosome assembly GTPase Era [Shewanella oneidensis MR-1]
Length = 339
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 88/168 (52%), Gaps = 10/168 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIG PN GKS+++N ++G K++ S+K TT H ++G+ T QI DTPGL + +
Sbjct: 48 VAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPRQIVFIDTPGLHIEE 107
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAPPKQKR 260
+ R+ + +A +L +V MV+F V T+ D V+ + R G++ +K
Sbjct: 108 QRAIN-----RLMNRAAASSLADVSMVIFVVDGMTWTADDEMVLSKLRRGGEE----RKT 158
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
VL +NKVD + K+ L E ++ I S KG +K + +
Sbjct: 159 VLAINKVDNIKDKEALFPYLEDVAKKYPFDEILPISASKGTNVKRILE 206
>gi|394988698|ref|ZP_10381533.1| hypothetical protein SCD_01103 [Sulfuricella denitrificans skB26]
gi|393792077|dbj|GAB71172.1| hypothetical protein SCD_01103 [Sulfuricella denitrificans skB26]
Length = 293
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 13/168 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++N+++G K++ SRK TT H ++G+ T AD Q DTPG +
Sbjct: 8 IAIVGRPNVGKSTLLNHLIGQKISITSRKAQTTRHRIVGIRTDADAQYVFVDTPGFQMQ- 66
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHR-HLTSPDSRVIRLIERMGKQAPPKQKR 260
H++V RV + +L +V + +F + + D +V+ L+ P Q
Sbjct: 67 ----HQNVLNRVMNRTVTQSLSDVDVALFVIESMRFDARDEKVLALL-------PRNQPV 115
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
VL +NK D V+ K LL E+ + I S + + L L Q
Sbjct: 116 VLVINKTDKVSDKSTLLPFIEKVSASFPFAAIIPVSAKRDSQLTELVQ 163
>gi|410943089|ref|ZP_11374830.1| GTPase Era [Gluconobacter frateurii NBRC 101659]
Length = 295
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++GAPNAGKS+++N + G K++ VS K TT LG++ D QI + D PG+ +
Sbjct: 8 VALVGAPNAGKSTLLNRIAGAKLSIVSPKAQTTRFRTLGIVVHQDAQIILVDLPGIFKPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW+ ++ +++ D L D R E + K A +K
Sbjct: 68 RRLD----RAMVNAAWTGSQDADLTLLLIDAKAGLRE-DVR-----EIIAKLAEGNKKIW 117
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK DLV+ ++LL + ++ L E +FM S G G++ L +L
Sbjct: 118 LVLNKTDLVS-AEELLPLTQEVSSLLTVEHVFMLSARSGDGVEDLMNHL 165
>gi|238650708|ref|YP_002916561.1| GTP-binding protein Era [Rickettsia peacockii str. Rustic]
gi|238624806|gb|ACR47512.1| GTP-binding protein Era [Rickettsia peacockii str. Rustic]
Length = 339
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 95/183 (51%), Gaps = 12/183 (6%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
K +QK+V+V IIG PN GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++
Sbjct: 46 KMSNQKTVSVCIIGRPNNGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILY 105
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGK 252
DTPG+ K K V AWS+++ ++++++ D R ++ + +
Sbjct: 106 DTPGIFEPKGSLE----KAMVRCAWSSLHSADLVLLIIDSLRSFDDITHNILDKLRSLN- 160
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
P + +NK+D+ +K + +K H P +F S L G + L +Y+
Sbjct: 161 IVP-----IFLLNKIDIESKYLNDIKAFLTENH-PD-SLLFPISALSGKNIDGLLEYITS 213
Query: 313 QFK 315
+ K
Sbjct: 214 KAK 216
>gi|57239269|ref|YP_180405.1| GTP-binding protein Era [Ehrlichia ruminantium str. Welgevonden]
gi|58579232|ref|YP_197444.1| GTP-binding protein Era [Ehrlichia ruminantium str. Welgevonden]
gi|81819234|sp|Q5HAY9.1|ERA_EHRRW RecName: Full=GTPase Era
gi|57161348|emb|CAH58271.1| putative GTP-binding protein ERA [Ehrlichia ruminantium str.
Welgevonden]
gi|58417858|emb|CAI27062.1| GTP-binding protein Era homolog [Ehrlichia ruminantium str.
Welgevonden]
Length = 296
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 11/170 (6%)
Query: 143 GIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKS 202
I+GA NAGKS+++N +VG KVAAV+ K TT + V + Q+ DTPG+ K+
Sbjct: 12 AIVGATNAGKSTLVNVLVGQKVAAVTPKVQTTRVRMHAVSNHENVQLIFIDTPGIFSPKT 71
Query: 203 GYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVL 262
K K V+ AW ++ E ++V+ DV +L ++I I+ A +L
Sbjct: 72 ----KLEKFLVKHAWMSLKGIENVIVLVDVKNYLNQHLKKIIDRIKHSNLNA------IL 121
Query: 263 CMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
+NK+D+V + + +V E L + + F S L G G+ L YL E
Sbjct: 122 VLNKIDIV-HQSIVSEVIEYMYSLYKFSKAFTISALYGIGIDKLVDYLCE 170
>gi|210623874|ref|ZP_03294109.1| hypothetical protein CLOHIR_02060 [Clostridium hiranonis DSM 13275]
gi|210153300|gb|EEA84306.1| hypothetical protein CLOHIR_02060 [Clostridium hiranonis DSM 13275]
Length = 299
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N +VG K+A +S K TT + + V T ++Q+ DTPG+
Sbjct: 3 KSGFVSIVGRPNVGKSTLMNNVVGEKIAIMSDKPQTTRNTIQAVYTDDESQVVFLDTPGI 62
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ ++ V++A A + ++++ V D R + D R++ + G + P
Sbjct: 63 HKPKNKLG----EIMVKAATDAFSNVDLILFVVDSSRKIGPGDRRIME--DLRGSKTPI- 115
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
VL +NK+D + K +L + + + ++ I S LKG +K L + E ++
Sbjct: 116 ---VLVINKIDQIEDKDELFDIIKMYDDEKMFKEIVPISALKGKNVKTLINVIKEDLEE 171
>gi|126173440|ref|YP_001049589.1| GTP-binding protein Era [Shewanella baltica OS155]
gi|160874398|ref|YP_001553714.1| GTP-binding protein Era [Shewanella baltica OS195]
gi|378707644|ref|YP_005272538.1| GTP-binding protein Era [Shewanella baltica OS678]
gi|386340193|ref|YP_006036559.1| GTP-binding protein Era-like-protein [Shewanella baltica OS117]
gi|418023267|ref|ZP_12662252.1| GTP-binding protein Era-like-protein [Shewanella baltica OS625]
gi|125996645|gb|ABN60720.1| GTP-binding protein Era [Shewanella baltica OS155]
gi|160859920|gb|ABX48454.1| GTP-binding protein Era [Shewanella baltica OS195]
gi|315266633|gb|ADT93486.1| GTP-binding protein Era [Shewanella baltica OS678]
gi|334862594|gb|AEH13065.1| GTP-binding protein Era-like-protein [Shewanella baltica OS117]
gi|353537150|gb|EHC06707.1| GTP-binding protein Era-like-protein [Shewanella baltica OS625]
Length = 338
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIG PN GKS++IN ++G KV+ S+K TT H ++G+ T QI DTPGL + +
Sbjct: 47 VAIIGRPNVGKSTLINRLLGQKVSITSKKPQTTRHRIMGIHTDGPKQIVFIDTPGLHIEE 106
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAPPKQKR 260
+ R+ + +A +L +V MV+F V T+ D V+ + R G++ ++
Sbjct: 107 QRAIN-----RLMNRAAASSLADVAMVIFVVDGMTWTADDEMVLSKLRRGGEE----RQT 157
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
+L +NKVD + K+ L E+ ++ I S KG ++ + +
Sbjct: 158 ILAINKVDNIKDKESLFPYLEEVAKKYPFDEILPISASKGTNVQRILE 205
>gi|239948355|ref|ZP_04700108.1| GTP-binding protein Era [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239922631|gb|EER22655.1| GTP-binding protein Era [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 567
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 96/183 (52%), Gaps = 12/183 (6%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
K +QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++
Sbjct: 274 KMSNQKTVSVCIIGRPNSGKSTLLNIIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILY 333
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGK 252
DTPG+ K K V AWS+++ ++++++ D + ++ + +
Sbjct: 334 DTPGIFEPKGTLE----KAMVRCAWSSLHSADLVLLIIDSLKPFDDVTHNILDKLRSLN- 388
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
P + +NK+D+ +K + +K H P +F S L G + L +Y+
Sbjct: 389 IVP-----IFLLNKIDIESKYLNDIKAFLTGNH-PD-SLLFPISALSGKNIDGLLEYITS 441
Query: 313 QFK 315
+ K
Sbjct: 442 KAK 444
>gi|417573118|ref|ZP_12223972.1| GTP-binding protein Era [Acinetobacter baumannii Canada BC-5]
gi|421802055|ref|ZP_16238009.1| GTP-binding protein Era [Acinetobacter baumannii Canada BC1]
gi|400208686|gb|EJO39656.1| GTP-binding protein Era [Acinetobacter baumannii Canada BC-5]
gi|410404443|gb|EKP56510.1| GTP-binding protein Era [Acinetobacter baumannii Canada BC1]
Length = 342
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ Q DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D H+ + D ++E++
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVIDAHKWTQNDD----LVLEKLKNADM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P ++ +NK D K+++L + ++ L + I S L+GA L+ L++ +
Sbjct: 149 PV---IMVINKADTFGDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETI 200
>gi|58040242|ref|YP_192206.1| GTP-binding protein Era [Gluconobacter oxydans 621H]
gi|58002656|gb|AAW61550.1| GTP-binding protein [Gluconobacter oxydans 621H]
Length = 295
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 87/173 (50%), Gaps = 11/173 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++GAPNAGKS+++N + G K++ VS K TT LG++ + + QI + D PG+ +
Sbjct: 8 VALVGAPNAGKSTLLNRIAGAKLSIVSPKAQTTRFRTLGIVMQDNAQIILVDLPGIFKPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS ++ +++ D L D R E + K A K +
Sbjct: 68 RRLD----RAMVNAAWSGSQDADLTLLLVDAKSGLRE-DVR-----EIIAKLAESKNRIW 117
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK DLV ++ +LL + ++ L E +FM S G G+ L L +
Sbjct: 118 LVLNKTDLV-ERGELLPLTQEISGLINVEHVFMLSARSGEGVSDLMARLAAEL 169
>gi|116626742|ref|YP_828898.1| GTP-binding protein Era [Candidatus Solibacter usitatus Ellin6076]
gi|116229904|gb|ABJ88613.1| GTP-binding protein Era [Candidatus Solibacter usitatus Ellin6076]
Length = 304
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 10/175 (5%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG PNAGKS+++N +VG KVA V+ K TT + GV+T + QI DTPG+
Sbjct: 6 RSGFVSLIGRPNAGKSTLLNALVGQKVAIVADKPQTTRTSIQGVLTLPEAQIVFADTPGI 65
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + K +++ A+ ++L+ V D R D R I + R K
Sbjct: 66 HKADTPLN----KRLMDTVRGALEERDLLLFVADATRKFNEDDRRAIDIARRH------K 115
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
VL +NK+DL+ K LL + E++K + + S +K GL L +++
Sbjct: 116 TPVVLVLNKIDLLKDKAHLLPLIEEYKAVFEFTEYVPVSSVKKIGLDQLRAVILK 170
>gi|265767859|ref|ZP_06095391.1| GTP-binding protein Era [Bacteroides sp. 2_1_16]
gi|336412106|ref|ZP_08592564.1| GTP-binding protein Era [Bacteroides sp. 2_1_56FAA]
gi|383119925|ref|ZP_09940662.1| GTP-binding protein Era [Bacteroides sp. 3_2_5]
gi|423252219|ref|ZP_17233221.1| GTP-binding protein Era [Bacteroides fragilis CL03T00C08]
gi|423252539|ref|ZP_17233470.1| GTP-binding protein Era [Bacteroides fragilis CL03T12C07]
gi|423261233|ref|ZP_17242134.1| GTP-binding protein Era [Bacteroides fragilis CL07T00C01]
gi|423267758|ref|ZP_17246738.1| GTP-binding protein Era [Bacteroides fragilis CL07T12C05]
gi|423272333|ref|ZP_17251301.1| GTP-binding protein Era [Bacteroides fragilis CL05T00C42]
gi|423276789|ref|ZP_17255721.1| GTP-binding protein Era [Bacteroides fragilis CL05T12C13]
gi|423283045|ref|ZP_17261930.1| GTP-binding protein Era [Bacteroides fragilis HMW 615]
gi|251944092|gb|EES84611.1| GTP-binding protein Era [Bacteroides sp. 3_2_5]
gi|263252531|gb|EEZ24059.1| GTP-binding protein Era [Bacteroides sp. 2_1_16]
gi|335939278|gb|EGN01155.1| GTP-binding protein Era [Bacteroides sp. 2_1_56FAA]
gi|387774385|gb|EIK36497.1| GTP-binding protein Era [Bacteroides fragilis CL07T00C01]
gi|392647831|gb|EIY41528.1| GTP-binding protein Era [Bacteroides fragilis CL03T00C08]
gi|392660615|gb|EIY54224.1| GTP-binding protein Era [Bacteroides fragilis CL03T12C07]
gi|392695525|gb|EIY88737.1| GTP-binding protein Era [Bacteroides fragilis CL05T00C42]
gi|392696001|gb|EIY89205.1| GTP-binding protein Era [Bacteroides fragilis CL05T12C13]
gi|392696017|gb|EIY89219.1| GTP-binding protein Era [Bacteroides fragilis CL07T12C05]
gi|404581319|gb|EKA86018.1| GTP-binding protein Era [Bacteroides fragilis HMW 615]
Length = 293
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 99/181 (54%), Gaps = 16/181 (8%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
K+ V I+G PN GKS+++N +VG +++ + K TT H ++G+ D QI DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNVLVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPG 61
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
++ K Y ++ + + SA+ +VL+ V DV + +PD I+++ +Q+ P
Sbjct: 62 VL--KPNYKLQESMLNFST--SALADADVLLYVTDV---IETPDKNN-EFIQKVRQQSAP 113
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
+L +NK+DL ++K L+K+ E++K L I S A K Y+M++ KD
Sbjct: 114 ---ILLLINKIDLTDQEK-LVKLVEEWKELLPQAEIIPIS----AATKFNVDYVMKRIKD 165
Query: 317 L 317
L
Sbjct: 166 L 166
>gi|224368191|ref|YP_002602354.1| hypothetical protein HRM2_10780 [Desulfobacterium autotrophicum
HRM2]
gi|223690907|gb|ACN14190.1| Era [Desulfobacterium autotrophicum HRM2]
Length = 300
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 11/168 (6%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
+E D K+ + I+GAPNAGKS+++N ++G K++ S+K TT +LGV+ + QI
Sbjct: 7 QETDFKAGFIAIVGAPNAGKSTLLNTVLGQKISITSKKPQTTRDRILGVVERPGAQIIFV 66
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGK 252
DTPG+ S + K V+ A SAV+ + ++++ DV T ++ +I +++ K
Sbjct: 67 DTPGIHRAHSLLNKK----IVDQALSAVDDVDAVLLMIDVTSKDTESEALIIEQLQKRNK 122
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKG 300
VL +NK+DLV K ++L + ++ L ++ + S G
Sbjct: 123 AV------VLALNKIDLV-KSNEILPLIARYASLHEFKAVIPVSAKTG 163
>gi|343493990|ref|ZP_08732274.1| GTPase Era [Vibrio nigripulchritudo ATCC 27043]
gi|342825631|gb|EGU60108.1| GTPase Era [Vibrio nigripulchritudo ATCC 27043]
Length = 321
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 80/151 (52%), Gaps = 12/151 (7%)
Query: 128 EEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADT 187
E +E E+Q V I+G PN GKS+++N ++G K++ SRK TT H ++GV T+ D
Sbjct: 16 EGQETSTENQHCGFVAIVGRPNVGKSTLLNQLLGQKISITSRKPQTTRHRIMGVDTEGDY 75
Query: 188 QICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRL 246
Q DTPGL + + ++ + S+ S VNL V F V H TS D V
Sbjct: 76 QAIFVDTPGLHIEEKRAINRLMNRAANSSLSDVNL-----VFFLVDGTHWTSDDEMV--- 127
Query: 247 IERMGKQAPPKQKRVLCMNKVDLVTKKKDLL 277
++ K P VLC+NKVD V + +++
Sbjct: 128 FTKLNKSNFPV---VLCVNKVDNVKDRNEVM 155
>gi|392376032|ref|YP_003207865.1| GTP-binding protein (era) [Candidatus Methylomirabilis oxyfera]
gi|258593725|emb|CBE70066.1| GTP-binding protein (era) [Candidatus Methylomirabilis oxyfera]
Length = 300
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 103/180 (57%), Gaps = 14/180 (7%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+++N ++G KV+ VS + TT +++G+ + Q+ DTP
Sbjct: 5 NDKSGFVAIIGRPNVGKSTLMNRLLGQKVSIVSPRPQTTRTKIMGIRSLPGAQLIFLDTP 64
Query: 196 GLMLNKS-GYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
G ++KS GY H ++ V++A +++ ++++ + + L+ D ++ +++R+
Sbjct: 65 G--IDKSGGYFH---RLMVKTATNSLEGADLILWIVEAPDPLSQGDKLILEILKRVTSPI 119
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
+L +NKVDLV +K+ LL ++F+ L + I S KG + AL + L+ Q+
Sbjct: 120 ------LLAVNKVDLV-QKESLLPTIDRFRSLLPFAEIVPISATKGDNV-ALLESLLVQY 171
>gi|193213835|ref|YP_001995034.1| GTP-binding protein Era [Chloroherpeton thalassium ATCC 35110]
gi|193087312|gb|ACF12587.1| GTP-binding protein Era [Chloroherpeton thalassium ATCC 35110]
Length = 321
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 91/172 (52%), Gaps = 13/172 (7%)
Query: 144 IIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSG 203
I+G PNAGKS+++N ++G K++ V+ K TT VLG+ T QI + DTPG+M K
Sbjct: 29 ILGEPNAGKSTLLNVLLGEKISIVTPKPQTTRKRVLGIFTDKSCQIVLLDTPGIMKPK-- 86
Query: 204 YSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTS-PDSRVIRLIERMGKQAPPKQKRVL 262
+K + ++ A +V +VL+++ DV ++ + + +R+ P +L
Sbjct: 87 --YKLHEAMLDLADKSVEDSDVLVLLLDVEKYQKGKAELKADLAFQRIANTKKP---VIL 141
Query: 263 CMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYL 310
+NKVDL+TK L +A+ P + I S LKG LKA+ YL
Sbjct: 142 VLNKVDLITKDASLELIAKFSSEYP-FREIVPLSALKGYNIREFLKAVVPYL 192
>gi|146292263|ref|YP_001182687.1| GTP-binding protein Era [Shewanella putrefaciens CN-32]
gi|145563953|gb|ABP74888.1| GTP-binding protein Era [Shewanella putrefaciens CN-32]
Length = 338
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIG PN GKS+++N ++G K++ S+K TT H ++G+ T QI DTPGL + +
Sbjct: 47 VAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPKQIVFIDTPGLHIEE 106
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAPPKQKR 260
+ R+ + +A +L +V MV+F V T+ D V+ + R G++ +K
Sbjct: 107 QRAIN-----RLMNRAAASSLADVAMVIFVVDGMTWTADDEMVLSKLRRGGEE----RKT 157
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
+L +NKVD + K+ L E+ ++ I S KG ++ + +
Sbjct: 158 ILAINKVDNIKDKEALFPYLEEVAKKYPFDEILPISASKGTNVQRILE 205
>gi|283769577|ref|ZP_06342473.1| GTP-binding protein Era [Bulleidia extructa W1219]
gi|283103845|gb|EFC05231.1| GTP-binding protein Era [Bulleidia extructa W1219]
Length = 297
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 84/153 (54%), Gaps = 16/153 (10%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S VGI G PNAGKS++IN +VG KVA VS K+ TT E+ G++++ D QI DTPG+
Sbjct: 2 RSGFVGIAGRPNAGKSTLINALVGEKVAIVSEKSQTTRSEIRGILSREDGQIIFTDTPGI 61
Query: 198 M--LNKSGYSHKDVKVRV-ESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
L++ G VR+ + +S + ++L +V D D+ V+ I +
Sbjct: 62 HKPLDRLG-------VRMNKEVYSVIQDVDILYLVVDASVPFAKGDAFVLEHISNL---- 110
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLP 287
K+ L +NKVD ++KKK + + E K P
Sbjct: 111 --KKPVFLILNKVDRLSKKKVIALLEEWAKRYP 141
>gi|60683340|ref|YP_213484.1| GTP-binding protein Era [Bacteroides fragilis NCTC 9343]
gi|375360148|ref|YP_005112920.1| putative GTP-binding protein (cell growth-related) [Bacteroides
fragilis 638R]
gi|60494774|emb|CAH09580.1| putative GTP-binding protein (cell growth-related) [Bacteroides
fragilis NCTC 9343]
gi|301164829|emb|CBW24389.1| putative GTP-binding protein (cell growth-related) [Bacteroides
fragilis 638R]
Length = 305
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 99/181 (54%), Gaps = 16/181 (8%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
K+ V I+G PN GKS+++N +VG +++ + K TT H ++G+ D QI DTPG
Sbjct: 14 HKAGFVNIVGNPNVGKSTLMNVLVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPG 73
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
++ K Y ++ + + SA+ +VL+ V DV + +PD I+++ +Q+ P
Sbjct: 74 VL--KPNYKLQESMLNFST--SALADADVLLYVTDV---IETPDKNN-EFIQKVRQQSAP 125
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
+L +NK+DL ++K L+K+ E++K L I S A K Y+M++ KD
Sbjct: 126 ---ILLLINKIDLTDQEK-LVKLVEEWKELLPQAEIIPIS----AATKFNVDYVMKRIKD 177
Query: 317 L 317
L
Sbjct: 178 L 178
>gi|302383080|ref|YP_003818903.1| GTP-binding protein Era [Brevundimonas subvibrioides ATCC 15264]
gi|302193708|gb|ADL01280.1| GTP-binding protein Era [Brevundimonas subvibrioides ATCC 15264]
Length = 315
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 144 IIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSG 203
IIGAPNAGKS+++N + G+KV+ V++K TT V G+ + ++QI + DTPG+ +
Sbjct: 14 IIGAPNAGKSTLVNRLTGSKVSIVTQKVQTTRFPVRGIAMEGESQIVLVDTPGIFTPR-- 71
Query: 204 YSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTS-------PDSRVIRLIERMGKQAPP 256
+ + V SAW +V++ + D H+ S D R E +
Sbjct: 72 --RRLDRAMVASAWGGAQDADVVVHLIDAASHIASAGKEGEAADRRSAEDTETIIANLKA 129
Query: 257 KQKRV-LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+V L +NK+D + ++ LL ++ Y ++M S L G G+ L Q L
Sbjct: 130 SNTQVILALNKIDGM-RRDTLLALSHALFETGVYSEVYMISALSGDGVDDLKQRL 183
>gi|153214498|ref|ZP_01949407.1| GTP-binding protein Era [Vibrio cholerae 1587]
gi|153803091|ref|ZP_01957677.1| GTP-binding protein Era [Vibrio cholerae MZO-3]
gi|153826892|ref|ZP_01979559.1| GTP-binding protein Era [Vibrio cholerae MZO-2]
gi|153830876|ref|ZP_01983543.1| GTP-binding protein Era [Vibrio cholerae 623-39]
gi|229524447|ref|ZP_04413852.1| GTP-binding protein Era [Vibrio cholerae bv. albensis VL426]
gi|229527068|ref|ZP_04416463.1| GTP-binding protein Era [Vibrio cholerae 12129(1)]
gi|254226245|ref|ZP_04919838.1| GTP-binding protein Era [Vibrio cholerae V51]
gi|254291660|ref|ZP_04962448.1| GTP-binding protein Era [Vibrio cholerae AM-19226]
gi|262190710|ref|ZP_06048941.1| GTP-binding protein Era [Vibrio cholerae CT 5369-93]
gi|297581084|ref|ZP_06943009.1| GTP-binding protein Era [Vibrio cholerae RC385]
gi|417821775|ref|ZP_12468389.1| GTP-binding protein Era [Vibrio cholerae HE39]
gi|417825680|ref|ZP_12472268.1| GTP-binding protein Era [Vibrio cholerae HE48]
gi|419830894|ref|ZP_14354379.1| GTP-binding protein Era [Vibrio cholerae HC-1A2]
gi|419834579|ref|ZP_14358033.1| GTP-binding protein Era [Vibrio cholerae HC-61A2]
gi|421352164|ref|ZP_15802529.1| GTP-binding protein Era [Vibrio cholerae HE-25]
gi|422918293|ref|ZP_16952607.1| GTP-binding protein Era [Vibrio cholerae HC-02A1]
gi|422923754|ref|ZP_16956898.1| GTP-binding protein Era [Vibrio cholerae BJG-01]
gi|423823192|ref|ZP_17717200.1| GTP-binding protein Era [Vibrio cholerae HC-55C2]
gi|423857153|ref|ZP_17721002.1| GTP-binding protein Era [Vibrio cholerae HC-59A1]
gi|423884429|ref|ZP_17724596.1| GTP-binding protein Era [Vibrio cholerae HC-60A1]
gi|423957749|ref|ZP_17735492.1| GTP-binding protein Era [Vibrio cholerae HE-40]
gi|423985734|ref|ZP_17739048.1| GTP-binding protein Era [Vibrio cholerae HE-46]
gi|423998715|ref|ZP_17741965.1| GTP-binding protein Era [Vibrio cholerae HC-02C1]
gi|424017617|ref|ZP_17757443.1| GTP-binding protein Era [Vibrio cholerae HC-55B2]
gi|424020534|ref|ZP_17760315.1| GTP-binding protein Era [Vibrio cholerae HC-59B1]
gi|424625915|ref|ZP_18064374.1| GTP-binding protein Era [Vibrio cholerae HC-50A1]
gi|424630399|ref|ZP_18068681.1| GTP-binding protein Era [Vibrio cholerae HC-51A1]
gi|424634446|ref|ZP_18072544.1| GTP-binding protein Era [Vibrio cholerae HC-52A1]
gi|424637525|ref|ZP_18075531.1| GTP-binding protein Era [Vibrio cholerae HC-55A1]
gi|424641428|ref|ZP_18079308.1| GTP-binding protein Era [Vibrio cholerae HC-56A1]
gi|424649501|ref|ZP_18087161.1| GTP-binding protein Era [Vibrio cholerae HC-57A1]
gi|429886900|ref|ZP_19368438.1| GTP-binding protein Era [Vibrio cholerae PS15]
gi|443528419|ref|ZP_21094455.1| GTP-binding protein Era [Vibrio cholerae HC-78A1]
gi|124115300|gb|EAY34120.1| GTP-binding protein Era [Vibrio cholerae 1587]
gi|124121373|gb|EAY40116.1| GTP-binding protein Era [Vibrio cholerae MZO-3]
gi|125621218|gb|EAZ49559.1| GTP-binding protein Era [Vibrio cholerae V51]
gi|148873645|gb|EDL71780.1| GTP-binding protein Era [Vibrio cholerae 623-39]
gi|149739255|gb|EDM53517.1| GTP-binding protein Era [Vibrio cholerae MZO-2]
gi|150422432|gb|EDN14391.1| GTP-binding protein Era [Vibrio cholerae AM-19226]
gi|229335465|gb|EEO00947.1| GTP-binding protein Era [Vibrio cholerae 12129(1)]
gi|229338028|gb|EEO03045.1| GTP-binding protein Era [Vibrio cholerae bv. albensis VL426]
gi|262033422|gb|EEY51929.1| GTP-binding protein Era [Vibrio cholerae CT 5369-93]
gi|297534910|gb|EFH73746.1| GTP-binding protein Era [Vibrio cholerae RC385]
gi|340039406|gb|EGR00381.1| GTP-binding protein Era [Vibrio cholerae HE39]
gi|340047165|gb|EGR08095.1| GTP-binding protein Era [Vibrio cholerae HE48]
gi|341635338|gb|EGS60056.1| GTP-binding protein Era [Vibrio cholerae HC-02A1]
gi|341643557|gb|EGS67839.1| GTP-binding protein Era [Vibrio cholerae BJG-01]
gi|395952609|gb|EJH63223.1| GTP-binding protein Era [Vibrio cholerae HE-25]
gi|408011092|gb|EKG48928.1| GTP-binding protein Era [Vibrio cholerae HC-50A1]
gi|408017034|gb|EKG54556.1| GTP-binding protein Era [Vibrio cholerae HC-52A1]
gi|408022034|gb|EKG59263.1| GTP-binding protein Era [Vibrio cholerae HC-56A1]
gi|408022470|gb|EKG59679.1| GTP-binding protein Era [Vibrio cholerae HC-55A1]
gi|408031271|gb|EKG67907.1| GTP-binding protein Era [Vibrio cholerae HC-57A1]
gi|408053471|gb|EKG88485.1| GTP-binding protein Era [Vibrio cholerae HC-51A1]
gi|408620667|gb|EKK93679.1| GTP-binding protein Era [Vibrio cholerae HC-1A2]
gi|408634300|gb|EKL06563.1| GTP-binding protein Era [Vibrio cholerae HC-55C2]
gi|408639757|gb|EKL11564.1| GTP-binding protein Era [Vibrio cholerae HC-59A1]
gi|408640079|gb|EKL11880.1| GTP-binding protein Era [Vibrio cholerae HC-60A1]
gi|408648712|gb|EKL20047.1| GTP-binding protein Era [Vibrio cholerae HC-61A2]
gi|408656150|gb|EKL27248.1| GTP-binding protein Era [Vibrio cholerae HE-40]
gi|408663577|gb|EKL34446.1| GTP-binding protein Era [Vibrio cholerae HE-46]
gi|408852157|gb|EKL92001.1| GTP-binding protein Era [Vibrio cholerae HC-02C1]
gi|408858737|gb|EKL98409.1| GTP-binding protein Era [Vibrio cholerae HC-55B2]
gi|408866732|gb|EKM06109.1| GTP-binding protein Era [Vibrio cholerae HC-59B1]
gi|429226212|gb|EKY32352.1| GTP-binding protein Era [Vibrio cholerae PS15]
gi|443453238|gb|ELT17069.1| GTP-binding protein Era [Vibrio cholerae HC-78A1]
Length = 324
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 94/192 (48%), Gaps = 12/192 (6%)
Query: 124 RQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMT 183
R E + EDQ V I+G PN GKS+++N ++G K++ SRK TT H ++GV T
Sbjct: 15 RSEGQTATSTPEDQHCGFVAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVET 74
Query: 184 KADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRV 243
+ Q DTPGL + + ++ + S+ S VNL VL VV H T+ D V
Sbjct: 75 EGKYQAIYVDTPGLHIEEKRAINRLMNRAASSSLSDVNL--VLFVVEGT--HWTADDEMV 130
Query: 244 IRLIERMGKQAPPKQKRVLCMNKVDLVTKKKD-LLKVAEQFKHLPGYERIFMTSGLKGAG 302
+++ VLC+NKVD V + + +L + E K +P + I S +G
Sbjct: 131 FNKLQKANFPV------VLCVNKVDQVKDRNEVMLHMLELSKRMP-FVDIVPISAKQGKN 183
Query: 303 LKALTQYLMEQF 314
L +++ E
Sbjct: 184 TDVLKKHVREHL 195
>gi|372325335|ref|ZP_09519924.1| GTP-binding protein [Oenococcus kitaharae DSM 17330]
gi|366984143|gb|EHN59542.1| GTP-binding protein [Oenococcus kitaharae DSM 17330]
Length = 305
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 90/180 (50%), Gaps = 12/180 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
E+D KS V IIG PN GKS++INY+VG K+A +S K TT +++ G+ T + Q+ D
Sbjct: 2 EKDFKSGFVAIIGRPNVGKSTLINYIVGQKIAIISSKAQTTRNKIAGIYTTDNAQVVFLD 61
Query: 194 TPGLMLNKSGYSHKDVKVRVESA-WSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGK 252
TPG+ H + +E A A+N + ++ V D D +I ++++ K
Sbjct: 62 TPGIH-----KPHNSLDQYMEKASLGALNEADAVLFVVDASEKRGLGDDFIINRLKQI-K 115
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFK-HLPGYERIFMTSGLKGAGLKALTQYLM 311
P L +NK+DL+ K DL + + + ++ S L G + L + ++
Sbjct: 116 NTP----IYLLVNKIDLIKNKNDLFNTINSYTVNAIDWSEVYPISALSGEQVPDLVENII 171
>gi|113476532|ref|YP_722593.1| GTP-binding protein Era [Trichodesmium erythraeum IMS101]
gi|110167580|gb|ABG52120.1| GTP-binding protein Era [Trichodesmium erythraeum IMS101]
Length = 310
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 97/180 (53%), Gaps = 14/180 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS VGIIG PN GKS+++N +VG KVA S TT + + G++T QI DTPG
Sbjct: 17 KSGFVGIIGRPNVGKSTLMNQLVGQKVAITSPVAQTTRNRLRGILTTQAAQIIFVDTPG- 75
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
++K H+ KV V++A A+ ++++++ D D +I L++++ Q P
Sbjct: 76 -IHKP--QHQLGKVLVQNAKVAIQSVDLVLLIVDGSVIAGGGDRYIINLLDKI--QTP-- 128
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHL--PGYERIFMTSGLKGAGLKALTQYLMEQFK 315
+L MNK+DL + +D K+ + L P +I S + G G++ L L+EQ +
Sbjct: 129 --VILGMNKLDL--QPQDAWKIEASYYQLIHPHPWQIIKFSAVTGEGVEILQDLLIEQME 184
>gi|386286486|ref|ZP_10063676.1| GTPase Era [gamma proteobacterium BDW918]
gi|385280636|gb|EIF44558.1| GTPase Era [gamma proteobacterium BDW918]
Length = 309
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 91/164 (55%), Gaps = 10/164 (6%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
Q+ V IIG PN GKS+++N+++G K++ SRK TT H+VLG+ T+ + Q DTPG
Sbjct: 13 QRCGFVAIIGRPNVGKSTLLNHILGQKLSITSRKPQTTRHQVLGIKTEGEVQAIYVDTPG 72
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ L + ++ + ++A +A+ ++++ + D R T D V+R++E ++P
Sbjct: 73 MHLKEEKALNRYMN---KTASAAIKDVDLILFLVDRDR-WTDDDEMVLRILE--NARSPV 126
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKG 300
VL +NKVD + K LL + + + + + S L+G
Sbjct: 127 ----VLVINKVDRLDDKGQLLPLISELQSKYKFADVVPVSALQG 166
>gi|336314845|ref|ZP_08569760.1| GTP-binding protein Era [Rheinheimera sp. A13L]
gi|335880904|gb|EGM78788.1| GTP-binding protein Era [Rheinheimera sp. A13L]
Length = 298
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N +VG KV+ SRK TT H ++G+ T+ + Q DTPGL + +
Sbjct: 10 VAIVGRPNVGKSTLLNQLVGQKVSITSRKPQTTRHRIVGIDTQDNYQTVYVDTPGLHIEE 69
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
K R+ + +A + +V +++F V + D +++ + + K+ +
Sbjct: 70 -----KRAINRLMNKAAASTILDVELIIFVVEGTRWTDDDQMV-----LNRLIAAKKPVL 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NKVDL K+DLL + +++I S KG ++ L + + +Q
Sbjct: 120 LVVNKVDLYKDKEDLLPHLQWLGSQLEFQQIIPLSAEKGTNVQTLRELVQKQL 172
>gi|423686828|ref|ZP_17661636.1| GTPase Era [Vibrio fischeri SR5]
gi|371494896|gb|EHN70494.1| GTPase Era [Vibrio fischeri SR5]
Length = 322
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 83/151 (54%), Gaps = 10/151 (6%)
Query: 127 EEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKAD 186
E + EV ++Q + I+G PN GKS+++N ++G K++ SRK TT H ++GV T D
Sbjct: 16 EGKSEVVSDNQHCGFIAIVGRPNVGKSTLLNQILGQKISITSRKPQTTRHRIMGVDTDGD 75
Query: 187 TQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRL 246
Q DTPGL + + ++ + S+ S VNL VL +V H +PD ++
Sbjct: 76 YQAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNL--VLFLVDGTH---WTPDDEMV-- 128
Query: 247 IERMGKQAPPKQKRVLCMNKVDLVTKKKDLL 277
+ ++ K P VL +NKVD V KKD++
Sbjct: 129 LNKLKKSEFPT---VLLVNKVDNVKDKKDVM 156
>gi|339320328|ref|YP_004680023.1| GTP-binding protein Era [Candidatus Midichloria mitochondrii
IricVA]
gi|338226453|gb|AEI89337.1| GTP-binding protein Era [Candidatus Midichloria mitochondrii
IricVA]
Length = 291
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 90/179 (50%), Gaps = 20/179 (11%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QK++ + + G PNAGKS++IN +VG K+A V+ K TT G+ DTQ+ DTPG
Sbjct: 2 QKTLVIALAGCPNAGKSTLINKIVGQKIAIVTSKCQTTRFNTKGITNIDDTQLVFIDTPG 61
Query: 197 LM-----LNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMG 251
L L KS K + +E A +++ + D S +++ ++ +
Sbjct: 62 LFKPSRPLEKSIV--KQANLGLEEA-------DLICFIVDATFAKKQDFSSILKQLQTL- 111
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K+ +L +NKVD + K +LL++++ L ++ FM S KG G+ + Y+
Sbjct: 112 -----KKPIILLLNKVDALKIKSELLQLSQDMNRLYDFDSTFMISAKKGTGINEVLNYI 165
>gi|88658308|ref|YP_507292.1| GTP-binding protein Era [Ehrlichia chaffeensis str. Arkansas]
gi|123493487|sp|Q2GGZ1.1|ERA_EHRCR RecName: Full=GTPase Era
gi|88599765|gb|ABD45234.1| GTP-binding protein Era [Ehrlichia chaffeensis str. Arkansas]
Length = 296
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 85/171 (49%), Gaps = 13/171 (7%)
Query: 143 GIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKS 202
I+G NAGKS++IN +VG KVAAV+ K TT + V+ + Q+ DTPG+ K+
Sbjct: 12 AIVGTTNAGKSTLINMLVGQKVAAVTPKVQTTRVRMHAVLNNENVQLIFIDTPGIFSPKT 71
Query: 203 GYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVL 262
K K V+ AW ++ E ++++ DV +L ++I I++ A +L
Sbjct: 72 ----KLEKFIVKHAWMSLKGIENVILLLDVKNYLNKHIEKIISRIKQSNINA------IL 121
Query: 263 CMNKVDLV-TKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
+NK+D V T D K E L + + F S L GL L YL E
Sbjct: 122 VVNKIDTVPTSSVD--KAIEHMYSLHSFSKTFTISALHDIGLSRLVDYLCE 170
>gi|120599801|ref|YP_964375.1| GTP-binding protein Era [Shewanella sp. W3-18-1]
gi|386312937|ref|YP_006009102.1| GTP-binding protein Era [Shewanella putrefaciens 200]
gi|120559894|gb|ABM25821.1| GTP-binding protein Era [Shewanella sp. W3-18-1]
gi|319425562|gb|ADV53636.1| GTP-binding protein Era [Shewanella putrefaciens 200]
Length = 338
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIG PN GKS+++N ++G K++ S+K TT H ++G+ T QI DTPGL + +
Sbjct: 47 VAIIGRPNVGKSTLLNRLLGQKISITSKKPQTTRHRIMGIHTDGPKQIVFIDTPGLHIEE 106
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAPPKQKR 260
+ R+ + +A +L +V MV+F V T+ D V+ + R G++ +K
Sbjct: 107 QRAIN-----RLMNRAAASSLADVAMVIFVVDGMTWTADDEMVLSKLRRGGEE----RKT 157
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
+L +NKVD + K+ L E+ ++ I S KG ++ + +
Sbjct: 158 ILAINKVDNIKDKEALFPYLEEVAKKYPFDEILPISASKGTNVQRILE 205
>gi|169632754|ref|YP_001706490.1| GTP-binding protein Era [Acinetobacter baumannii SDF]
gi|260556583|ref|ZP_05828801.1| GTP-binding protein Era [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|169151546|emb|CAP00313.1| GTP-binding protein,16S rRNA-binding,ribosome-associated GTPase
[Acinetobacter baumannii]
gi|260409842|gb|EEX03142.1| GTP-binding protein Era [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|452947999|gb|EME53480.1| GTPase Era [Acinetobacter baumannii MSP4-16]
Length = 342
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ Q DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D H+ + D +++++
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVIDAHKWTQNDD----LVLDKLKNADM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P +L +NK D K+++L + ++ L + I S L+GA L+ L++ +
Sbjct: 149 PV---ILVINKADTFGDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETI 200
>gi|119774018|ref|YP_926758.1| GTP-binding protein Era [Shewanella amazonensis SB2B]
gi|119766518|gb|ABL99088.1| GTP-binding protein Era [Shewanella amazonensis SB2B]
Length = 332
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 12/167 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N ++ K++ SRK TT H ++G+ T+ QI DTPGL + +
Sbjct: 41 VAIVGRPNVGKSTLLNKLLKQKISITSRKPQTTRHRIMGIHTEGPNQIVFIDTPGLHIEE 100
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAPPKQKR 260
K R+ + +A +L +V MV+F V T+ D V+ + R G+ +K
Sbjct: 101 -----KRAINRLMNRAAASSLADVSMVIFVVDGMEWTADDEMVLNKLRRGGEH----RKT 151
Query: 261 VLCMNKVDLVTKKKDLLK-VAEQFKHLPGYERIFMTSGLKGAGLKAL 306
VL +NKVD + +K+DL + E K P ++ I S +G+ ++ L
Sbjct: 152 VLAINKVDGIKEKEDLFPYLIEVSKKYP-FDDIVPVSAKQGSNVERL 197
>gi|336114410|ref|YP_004569177.1| GTP-binding protein Era [Bacillus coagulans 2-6]
gi|335367840|gb|AEH53791.1| GTP-binding protein Era [Bacillus coagulans 2-6]
Length = 302
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 89/179 (49%), Gaps = 15/179 (8%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS + IIG PN GKS+ IN +VG K+A +S K TT +++ GV T D Q+ DTPG+
Sbjct: 7 KSGFISIIGRPNVGKSTFINQVVGQKIAIMSDKPQTTRNKIQGVYTADDAQMIFIDTPGI 66
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K HK V+SA + ++++ + + D +I L++ + +
Sbjct: 67 HKPK----HKLGDFMVKSATDTLKEVDLILFMVNAEEKRGRGDEYIIDLLKHV------R 116
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYLME 312
L +NK+DLV DLL EQ+K L + + S L G L A+ +YL E
Sbjct: 117 TPVFLVINKIDLV-HPDDLLAFIEQYKDLYPFREVVPISALGGNNVGRLLGAIKEYLPE 174
>gi|159042757|ref|YP_001531551.1| GTP-binding protein Era [Dinoroseobacter shibae DFL 12]
gi|189037268|sp|A8LLE0.1|ERA_DINSH RecName: Full=GTPase Era
gi|157910517|gb|ABV91950.1| GTP-binding protein Era [Dinoroseobacter shibae DFL 12]
Length = 308
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 8/169 (4%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS++ N MVG KV+ V+ K TT + GV + QI DTPGL +
Sbjct: 13 VALIGEPNAGKSTLTNAMVGAKVSIVTHKVQTTRARIRGVALEGAAQIVFVDTPGLFRPR 72
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW ++++++ + HR +T V ++E + ++ PKQ
Sbjct: 73 RRLD----RAMVAAAWGGAADADIVVLMVEAHRGMTDG---VRAILETLNERRDPKQIVA 125
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V K + LLK+ + + FM S KG G+ L +L
Sbjct: 126 LAINKIDRV-KSEVLLKLTQDLNAAYPFAETFMISAEKGYGVADLRAWL 173
>gi|302391411|ref|YP_003827231.1| GTP-binding protein Era [Acetohalobium arabaticum DSM 5501]
gi|302203488|gb|ADL12166.1| GTP-binding protein Era [Acetohalobium arabaticum DSM 5501]
Length = 306
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 94/184 (51%), Gaps = 11/184 (5%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
KEE+ KS V +IG PN GKS++IN+++G K+A + K TT +++ ++T+ + Q+
Sbjct: 9 KEENFKSGFVTVIGQPNVGKSTLINHLIGQKIAITTPKKQTTRNKLQCILTRDNAQLIFI 68
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGK 252
DTPG+ K + V++A+ A+ E++ + D + +T + ++ + G
Sbjct: 69 DTPGVHRPKDKMG----EYMVDTAYKALKKVELIYFMVDAQKGITDLERKINNQLS--GI 122
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
Q P ++ +NK+DLV+K K L V E + L Y + S G L +E
Sbjct: 123 QTPT----IIVLNKIDLVSKAK-LKDVIESCRRLGDYAELIPVSAETGENTNTLIDKSIE 177
Query: 313 QFKD 316
D
Sbjct: 178 LLPD 181
>gi|157828030|ref|YP_001494272.1| GTP-binding protein Era [Rickettsia rickettsii str. 'Sheila Smith']
gi|379016908|ref|YP_005293143.1| GTPase Era [Rickettsia rickettsii str. Brazil]
gi|157800511|gb|ABV75764.1| GTP-binding protein Era [Rickettsia rickettsii str. 'Sheila Smith']
gi|376325432|gb|AFB22672.1| GTPase Era [Rickettsia rickettsii str. Brazil]
Length = 339
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 101/184 (54%), Gaps = 14/184 (7%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
K +QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++
Sbjct: 46 KMSNQKTVSVCIIGQPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILY 105
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM-G 251
DTPG+ K KV V AWS+++ ++++++ D L S D +++++
Sbjct: 106 DTPGIFEPKGSLE----KVMVRCAWSSLHSADLVLLIID---SLKSFDDITHNILDKLRS 158
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
P + +NK+D+ +K + +K A ++ P + S L G + L +Y+
Sbjct: 159 LNIIP----IFLLNKIDIESKYLNDIK-AFLTENYPD-SLLLPISALSGKNIDGLLEYIT 212
Query: 312 EQFK 315
+ K
Sbjct: 213 SKAK 216
>gi|325290526|ref|YP_004266707.1| GTP-binding protein Era-like-protein [Syntrophobotulus glycolicus
DSM 8271]
gi|324965927|gb|ADY56706.1| GTP-binding protein Era-like-protein [Syntrophobotulus glycolicus
DSM 8271]
Length = 305
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 95/179 (53%), Gaps = 11/179 (6%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
K +D +S V ++G PNAGKS+++N +VG KV +S K TT + + ++T+ QI
Sbjct: 7 KTKDFRSGFVAVVGRPNAGKSTLLNTLVGQKVLIISEKPQTTRNRIQCILTEERGQIVFI 66
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGK 252
DTPG+ K H+ + V +A ++ ++++ V D + D V+ +++ G
Sbjct: 67 DTPGIHKPK----HQLGQYMVNTAKGSLRGTDLIIYVVDASVPFGTGDEYVLNMVKESGI 122
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
+ +L +NK+DL++K++ L K+ E F ++ + S L+G K LT +
Sbjct: 123 PS------ILALNKIDLLSKEEILSKIIE-FSQQADFKEVVPISALQGENTKKLTDLIF 174
>gi|411010672|ref|ZP_11387001.1| GTPase Era [Aeromonas aquariorum AAK1]
gi|423199751|ref|ZP_17186333.1| GTPase Era [Aeromonas hydrophila SSU]
gi|404628829|gb|EKB25600.1| GTPase Era [Aeromonas hydrophila SSU]
Length = 299
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N ++G KV+ S+K TT H +LG+ T+ + Q DTPGL + +
Sbjct: 10 VAIVGRPNVGKSTLLNKLLGQKVSITSKKPQTTRHRILGIDTEENYQTIYVDTPGLHIEE 69
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAPPKQKR 260
K R+ + + +L +V MVVF V H T D V +GK K
Sbjct: 70 -----KRAINRLMNRAATSSLGDVAMVVFVVDGTHWTKDDEMV------LGKLRNLKCPV 118
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQY 309
VL +NK+D V +K+DLL E + I S KG ++ + ++
Sbjct: 119 VLAVNKIDNVKEKEDLLPHLEWLGQQMNFSHILPISAEKGTNVEKIREW 167
>gi|383312126|ref|YP_005364927.1| GTPase Era [Candidatus Rickettsia amblyommii str. GAT-30V]
gi|378930786|gb|AFC69295.1| GTPase Era [Candidatus Rickettsia amblyommii str. GAT-30V]
Length = 343
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 96/183 (52%), Gaps = 12/183 (6%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
K +QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++
Sbjct: 50 KMSNQKTVSVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILY 109
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGK 252
DTPG+ K K V AWS+++ ++++++ D + ++ + +
Sbjct: 110 DTPGIFEPKGSLE----KAMVRCAWSSLHSADLVLLIIDSIKSFDDITHNILYKLRSLN- 164
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
P + +NK+D+ +K + +K H P +F S L G + L +Y+
Sbjct: 165 IVP-----IFLLNKIDIESKYLNDIKAFLTENH-PD-SLLFPISALSGRNIDVLLEYITS 217
Query: 313 QFK 315
+ K
Sbjct: 218 KAK 220
>gi|258511948|ref|YP_003185382.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478674|gb|ACV58993.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 298
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V +IG PN GKS+++N +VG KVA +S + TT + + GV T +Q+ DTPG+
Sbjct: 4 KSGFVALIGRPNVGKSTLLNALVGQKVAIMSNRPQTTRNRIRGVRTTETSQMIFIDTPGI 63
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K H+ + V++A +N +V+++V D + + + + +ER+ +
Sbjct: 64 HKPK----HRLGEYMVDAALKTLNEVDVIVLVVDASSPVHPTEQEIAKQLERV------R 113
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+L +NKVD + + +LK E+++ L +E S L+G + L + +
Sbjct: 114 TPVILALNKVDALEDRALVLKRIEEYQALRPFEEYVPISALRGEQVDLLAEII 166
>gi|376297381|ref|YP_005168611.1| GTP-binding protein Era [Desulfovibrio desulfuricans ND132]
gi|323459943|gb|EGB15808.1| GTP-binding protein Era [Desulfovibrio desulfuricans ND132]
Length = 302
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 88/173 (50%), Gaps = 10/173 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ +IG PNAGKS+++N +G KVA VS K TT + + G++T D Q+ DTPG+ +
Sbjct: 7 IALIGPPNAGKSTLMNTYIGQKVAIVSPKPQTTRNRISGILTTDDAQLVFLDTPGVHRLR 66
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSP---DSRVIRLIERMGKQAPPKQ 258
K + +ESAW+A+ + ++V+ D + P D + L++ +G+ P
Sbjct: 67 G----KMNRFLLESAWNALASSDAVVVLVDAALYCAKPQLLDKEIAPLVKPVGEAGRPV- 121
Query: 259 KRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
++ +NK+D + +K LL + L S LK G L + ++
Sbjct: 122 --LVAVNKIDRIKEKDQLLPFMARLAELWPEAEFVPVSALKAKGTDELLERIL 172
>gi|170695423|ref|ZP_02886568.1| GTP-binding protein Era [Burkholderia graminis C4D1M]
gi|170139614|gb|EDT07797.1| GTP-binding protein Era [Burkholderia graminis C4D1M]
Length = 287
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N +VG KV+ SRK TT H + G+ T D Q DTPG
Sbjct: 2 VAIVGRPNVGKSTLMNALVGQKVSITSRKAQTTRHRITGIHTLEDVQYIFVDTPGFQTKH 61
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
SG ++ + V S ++V + ++ V + R D +V+ LI PP +
Sbjct: 62 SGALNRSLNRAVTSTLTSV---DAILFVIEAGR-FGPDDQKVLDLI-------PPSVPTL 110
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERI 292
L NK+D V+ K L +Q L + I
Sbjct: 111 LIANKLDRVSDKDSLFPFMQQMSALRPFNEI 141
>gi|170725605|ref|YP_001759631.1| GTP-binding protein Era [Shewanella woodyi ATCC 51908]
gi|169810952|gb|ACA85536.1| GTP-binding protein Era [Shewanella woodyi ATCC 51908]
Length = 329
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 10/172 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N ++G K++ S+K TT H ++G+ T A+ Q+ DTPGL + +
Sbjct: 38 VAIVGRPNVGKSTLLNNLLGQKISITSKKPQTTRHRIMGIHTDAERQVVFIDTPGLHIEE 97
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAPPKQKR 260
K R+ + +A +L EV +V+F V T D V+R ++ +K
Sbjct: 98 -----KRAINRLMNRAAASSLAEVSLVIFVVDGMTWTDDDEMVLRKLQ----SRDDGRKT 148
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
VL +NKVD + K++L E+ ++ I S KG ++ + +E
Sbjct: 149 VLAVNKVDNIKDKEELFPYLEELSKKFPFDEILPISATKGTNVQRILDMSVE 200
>gi|424891047|ref|ZP_18314646.1| GTP-binding protein Era [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393173265|gb|EJC73310.1| GTP-binding protein Era [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 313
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N +VG KV+ VS K TT V G+ + QI DTPG+ +
Sbjct: 24 VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAIVRGIAIHDNAQIVFMDTPGIFKPR 83
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW ++++++ D R L ++ ++ + +Q ++
Sbjct: 84 RRLD----RAMVTSAWGGARDADLIVLLIDSERGLRGDAEAILEGLKEV------RQPKI 133
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V ++DLL +A +ER FM S G+G L YL
Sbjct: 134 LLLNKIDRVN-REDLLALAAAANEKIAFERTFMISAENGSGCDDLMDYL 181
>gi|114799800|ref|YP_759605.1| GTP-binding protein Era [Hyphomonas neptunium ATCC 15444]
gi|114739974|gb|ABI78099.1| GTP-binding protein Era [Hyphomonas neptunium ATCC 15444]
Length = 315
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 79/177 (44%), Gaps = 25/177 (14%)
Query: 144 IIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSG 203
+IGAPNAGKS++ N +VG KVA V+ K TT V GV D QI I DTPG+ K
Sbjct: 14 VIGAPNAGKSTLTNRLVGAKVAIVTHKVQTTRFPVRGVAQVGDAQIVIVDTPGIFAAKRR 73
Query: 204 YSHKDVKVRVESAWSAVNLFEVLMVVFD--------------VHRHLTSPDSRVIRLIER 249
VK +AW + + ++ + D RH D RVI ++
Sbjct: 74 LDRAMVK----AAWGGADEADCVVHLVDASAWVAEQTGRPSGAQRHSLEDDRRVIEQLKE 129
Query: 250 MGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
GK+ L +NK+DL + +L V YE F+ S G G+ L
Sbjct: 130 AGKRV------FLALNKIDLFPHDQ-VLPVIAALSEAGVYEETFLISAENGEGVDRL 179
>gi|23099406|ref|NP_692872.1| GTP-binding protein [Oceanobacillus iheyensis HTE831]
gi|81746143|sp|Q8EPY0.1|ERA_OCEIH RecName: Full=GTPase Era
gi|22777635|dbj|BAC13907.1| GTP-binding protein (Era/TrmE family) [Oceanobacillus iheyensis
HTE831]
Length = 300
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 11/181 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
E + KS + IIG PN GKS+ +N ++G K+A +S K TT +++ GV T D Q+ D
Sbjct: 2 ETNFKSGFLSIIGRPNVGKSTFMNKVIGQKIAIMSDKAQTTRNKIQGVFTTNDAQMIFID 61
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG+ K H+ V+ A +N + ++ + + D +I L++++
Sbjct: 62 TPGIHKPK----HRLGDFMVQIAEDTLNEVDSILFMINADEGYGRGDQYIIDLLQKVNSP 117
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
L +NK+DL+ + LL + E++K L +E I S L+G + L L E
Sbjct: 118 V------FLIINKIDLIHPDQ-LLPLIEKYKSLYDFEEIIPISALEGNNVDHLVDVLKEH 170
Query: 314 F 314
Sbjct: 171 L 171
>gi|296535949|ref|ZP_06898098.1| GTP-binding protein Era [Roseomonas cervicalis ATCC 49957]
gi|296263722|gb|EFH10198.1| GTP-binding protein Era [Roseomonas cervicalis ATCC 49957]
Length = 319
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 17/172 (9%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++GAPNAGKS+++N + G KV+ VS K TT + V+ + TQI + DTPG+ +
Sbjct: 30 VAVVGAPNAGKSTLVNRLAGAKVSIVSPKPQTTRFRIRAVVMQERTQIVLTDTPGIFSPR 89
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW ++ +++ D +T +I +++R RV
Sbjct: 90 RRLD----RAMVAAAWEGAQDADLALLIVDSRAGMTEAVESIISVLKR---------SRV 136
Query: 262 ---LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK DL+ KK LL + +E FM S KG GL + L
Sbjct: 137 PIWLVLNKSDLIDTKK-LLPLTASLNEQLSFEETFMISAEKGDGLDRMMAAL 187
>gi|170699586|ref|ZP_02890626.1| GTP-binding protein Era [Burkholderia ambifaria IOP40-10]
gi|172060070|ref|YP_001807722.1| GTP-binding protein Era [Burkholderia ambifaria MC40-6]
gi|170135537|gb|EDT03825.1| GTP-binding protein Era [Burkholderia ambifaria IOP40-10]
gi|171992587|gb|ACB63506.1| GTP-binding protein Era [Burkholderia ambifaria MC40-6]
Length = 287
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++N +VG K++ SRK TT H + G+ T D Q DTPG
Sbjct: 2 IAIVGRPNVGKSTLMNALVGQKISITSRKAQTTRHRITGINTFDDAQFVFVDTPGFQTRH 61
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S ++ + V S ++V+ V++ V + R D +V+ LI PP +
Sbjct: 62 STALNRSLNRAVTSTLTSVD---VILFVIEAGR-FGPDDQKVLDLI-------PPGMPTL 110
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHL 286
L NK+D VT K L +Q L
Sbjct: 111 LIANKIDRVTDKATLFPFMQQMSGL 135
>gi|374308400|ref|YP_005054831.1| GTP-binding protein Era [Filifactor alocis ATCC 35896]
gi|291166725|gb|EFE28771.1| GTP-binding protein Era [Filifactor alocis ATCC 35896]
Length = 301
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 15/176 (8%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
KS V IIG PN GKS+I+N+++G KV+ VS K TT + + G+ D QI DTPG
Sbjct: 5 HKSGFVSIIGRPNVGKSTILNWIIGEKVSIVSNKPQTTRNRISGIYNDEDCQIVFLDTPG 64
Query: 197 LM--LNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
+ NK G K ++++ S + +++M V D ++ D + M +
Sbjct: 65 MQNPRNKLG------KYMLKASTSTMKDTDLIMCVVDTSSYIGRMDKNI------MEQLK 112
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
++L +NK+D + K++ LK+ + L ++ I S LKG + ++ L
Sbjct: 113 HTSNTKILVINKMDQIP-KEEALKIISMYDALGIFDEIIPVSALKGDNMDSIVPTL 167
>gi|344344635|ref|ZP_08775496.1| GTP-binding protein Era-like-protein [Marichromatium purpuratum
984]
gi|343803799|gb|EGV21704.1| GTP-binding protein Era-like-protein [Marichromatium purpuratum
984]
Length = 300
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 10/170 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N ++G K+A S K TT H +LGV T+A+ QI DTPG +++
Sbjct: 12 VAIVGRPNVGKSTLLNRILGQKLAITSHKAQTTRHSILGVKTRAEGQILFVDTPG--IHR 69
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
G S + + +A +A+ ++++ V + R T D + + + R G + +
Sbjct: 70 RGESALNRYLN-RTARAALADTDLILFVVEALR-WTEEDEQALAAVARAGVEC------I 121
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
+NKVD V K+ LL + + +F S +G+ ++AL Q ++
Sbjct: 122 AVVNKVDRVEDKEALLPFLQTLGERHAFRELFPVSAARGSQVEALEQAVL 171
>gi|212550703|ref|YP_002309020.1| GTP-binding protein Era [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212548941|dbj|BAG83609.1| GTP-binding protein Era [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 300
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 11/159 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
E KS V I+G PN GKS+++N +VG K++ ++ K TT H ++G++ K + QI D
Sbjct: 6 ENKHKSGFVNIVGNPNVGKSTLMNTLVGGKLSIITSKAQTTRHRIIGIVNKPNVQIVFSD 65
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG++ ++K K + + SA+ ++L+ V D+ L D +++M +
Sbjct: 66 TPGIL----RPNYKLQKKMLNFSESALEDADILLYVSDIKNQLVKTDF----FLKKMQQT 117
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERI 292
P +L +NK+DL +K+ KV E K LP E I
Sbjct: 118 NLP---ILLILNKIDLFNQKQLEQKVIEYHKILPNAEII 153
>gi|384425399|ref|YP_005634757.1| GTP-binding protein Era [Vibrio cholerae LMA3984-4]
gi|327484952|gb|AEA79359.1| GTP-binding protein Era [Vibrio cholerae LMA3984-4]
Length = 325
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 91/181 (50%), Gaps = 12/181 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
EDQ V I+G PN GKS+++N ++G K++ SRK TT H ++GV T+ Q DT
Sbjct: 27 EDQHCGFVAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETEGKYQAIYVDT 86
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PGL + + ++ + S+ S VNL VL VV H T+ D V +++
Sbjct: 87 PGLHIEEKRAINRLMNRAASSSLSDVNL--VLFVVEGT--HWTADDEMVFNKLQKANFPV 142
Query: 255 PPKQKRVLCMNKVDLVTKKKD-LLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
VLC+NKVD V + + +L + E K +P + I S +G L +++ E
Sbjct: 143 ------VLCVNKVDQVKDRNEVMLHMLELSKRMP-FVDIVPISAKQGKNTDVLKKHVREH 195
Query: 314 F 314
Sbjct: 196 L 196
>gi|376260938|ref|YP_005147658.1| GTP-binding protein Era [Clostridium sp. BNL1100]
gi|373944932|gb|AEY65853.1| GTP-binding protein Era [Clostridium sp. BNL1100]
Length = 298
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V +IG PN GKS+++N + G K+A +S K TT + + GV+T + Q+ + DTPG+
Sbjct: 4 KSGFVSVIGRPNVGKSTLLNTITGQKIAIMSDKPQTTRNTIRGVITNKECQLILIDTPGI 63
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ V V E+ + EV +V+F V + P ++ I +I+++ + P
Sbjct: 64 HKPKTKLGEYMVNVASET------IKEVDLVLFLVEAN-AQPGAQDINIIQQLKQVKTP- 115
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
L +NKVDL++K K LL + + + L ++ I S LK G+ +
Sbjct: 116 --VFLILNKVDLISKDK-LLAIIDSYSKLMDFKAIIPISALKNDGIDII 161
>gi|261211554|ref|ZP_05925842.1| GTP-binding protein Era [Vibrio sp. RC341]
gi|260839509|gb|EEX66135.1| GTP-binding protein Era [Vibrio sp. RC341]
Length = 324
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 94/192 (48%), Gaps = 12/192 (6%)
Query: 124 RQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMT 183
R E + EDQ V I+G PN GKS+++N ++G K++ SRK TT H ++GV T
Sbjct: 15 RSEGQTATSTPEDQHCGFVAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVET 74
Query: 184 KADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRV 243
+ Q DTPGL + + ++ + S+ S VNL VL VV H T+ D V
Sbjct: 75 EGKYQAIYVDTPGLHIEEKRAINRLMNRAASSSLSDVNL--VLFVVEGT--HWTADDEMV 130
Query: 244 IRLIERMGKQAPPKQKRVLCMNKVDLVTKKKD-LLKVAEQFKHLPGYERIFMTSGLKGAG 302
+++ VLC+NKVD V + + +L + E K +P + I S +G
Sbjct: 131 FTKLQKANFPV------VLCVNKVDQVKDRNEVMLHMLELSKRMP-FVDIVPISAKQGKN 183
Query: 303 LKALTQYLMEQF 314
L +++ E
Sbjct: 184 TDVLKKHVREHL 195
>gi|294463173|gb|ADE77123.1| unknown [Picea sitchensis]
Length = 433
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 96/179 (53%), Gaps = 8/179 (4%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D +S V ++G PN GKS+++N M+G K++ V+ K TT H +LG+ + D Q+ ++DTP
Sbjct: 132 DHRSGYVAVVGKPNVGKSTLLNQMIGQKLSIVTDKPQTTRHRILGLCSAPDYQMVLYDTP 191
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G++ + HK + +++ SA + ++ V DV + P+ +V L E G
Sbjct: 192 GVIQKE---MHKLDAMMMKNVHSATGNADCVLTVVDVCK---VPE-KVNDLFEEDGVDLK 244
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
K +L +NK DL+ K ++ K E ++ G + I S G G++ + +++ +
Sbjct: 245 KKPPTLLVLNKKDLM-KPGEIAKRMEWYEKFGGADHILSISAKYGHGVEDVKNWIVSKL 302
>gi|229514086|ref|ZP_04403548.1| GTP-binding protein Era [Vibrio cholerae TMA 21]
gi|422308395|ref|ZP_16395545.1| GTP-binding protein Era [Vibrio cholerae CP1035(8)]
gi|229349267|gb|EEO14224.1| GTP-binding protein Era [Vibrio cholerae TMA 21]
gi|408617665|gb|EKK90778.1| GTP-binding protein Era [Vibrio cholerae CP1035(8)]
Length = 324
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 91/181 (50%), Gaps = 12/181 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
EDQ V I+G PN GKS+++N ++G K++ SRK TT H ++GV T+ Q DT
Sbjct: 26 EDQHCGFVAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETEGKYQAIYVDT 85
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PGL + + ++ + S+ S VNL VL VV H T+ D V +++
Sbjct: 86 PGLHIEEKRAINRLMNRAASSSLSDVNL--VLFVVEGT--HWTADDEMVFNKLQKANFPV 141
Query: 255 PPKQKRVLCMNKVDLVTKKKD-LLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
VLC+NKVD V + + +L + E K +P + I S +G L +++ E
Sbjct: 142 ------VLCVNKVDQVKDRNEVMLHMLELSKRMP-FVDIVPISAKQGKNTDVLKKHVREH 194
Query: 314 F 314
Sbjct: 195 L 195
>gi|84515164|ref|ZP_01002527.1| GTP-binding protein Era [Loktanella vestfoldensis SKA53]
gi|84511323|gb|EAQ07777.1| GTP-binding protein Era [Loktanella vestfoldensis SKA53]
Length = 305
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
K+ V +IG PNAGKS+++N MVG KV+ V+ K TT + GV Q+ DTPGL
Sbjct: 7 KAGFVALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMDGQAQLIFIDTPGL 66
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVI-RLIERMGKQAPP 256
+ + V +AW +V++++ + HR ++ ++ L +RMG
Sbjct: 67 FKPRRRLD----RAMVAAAWGGAADADVVVLMIEAHRGMSEGVKAILANLPDRMG----- 117
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
K K L +NK+D V K + LL + + FM S +G G AL ++L++Q
Sbjct: 118 KTKVALAINKIDKV-KSEGLLALTRDMNEAFAFAETFMISAERGHGCDALRKWLVDQ 173
>gi|421664270|ref|ZP_16104410.1| GTP-binding protein Era [Acinetobacter baumannii OIFC110]
gi|408712567|gb|EKL57750.1| GTP-binding protein Era [Acinetobacter baumannii OIFC110]
Length = 342
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ Q DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D H+ + D ++E++
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVIDAHKWTQNDD----LVLEKLKNADM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P +L +NK D K+++L + ++ L + I S L+G L+ L++ +
Sbjct: 149 PV---ILVINKADTFGDKREILPLIQERAKLMNFAEIVPVSALRGVNLEHLSETI 200
>gi|402486360|ref|ZP_10833192.1| GTPase Era [Rhizobium sp. CCGE 510]
gi|401815016|gb|EJT07346.1| GTPase Era [Rhizobium sp. CCGE 510]
Length = 312
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N +VG KV+ VS K TT V G+ + QI DTPG+ +
Sbjct: 23 VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAIVRGIAIHDNAQIVFMDTPGIFKPR 82
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW ++++++ D R L ++ ++ + +Q ++
Sbjct: 83 RRLD----RAMVTSAWGGARDADLIVLLIDSERGLRGDAEAILEGLKEV------RQPKI 132
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V ++DLL +A +ER FM S G+G L YL
Sbjct: 133 LLLNKIDRVN-REDLLALAAAANEKIAFERTFMISAENGSGCDDLMDYL 180
>gi|115351065|ref|YP_772904.1| GTP-binding protein Era [Burkholderia ambifaria AMMD]
gi|115281053|gb|ABI86570.1| GTP-binding protein Era [Burkholderia ambifaria AMMD]
Length = 299
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++N +VG K++ SRK TT H + G+ T D Q DTPG
Sbjct: 14 IAIVGRPNVGKSTLMNALVGQKISITSRKAQTTRHRITGINTFDDAQFVFVDTPGFQTRH 73
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S ++ + V S ++V+ V++ V + R D +V+ LI PP +
Sbjct: 74 STALNRSLNRAVTSTLTSVD---VILFVIEAGR-FGPDDQKVLDLI-------PPGMPTL 122
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHL 286
L NK+D VT K L +Q L
Sbjct: 123 LIANKIDRVTDKATLFPFMQQMSGL 147
>gi|332638283|ref|ZP_08417146.1| GTPase Era [Weissella cibaria KACC 11862]
Length = 302
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 95/183 (51%), Gaps = 11/183 (6%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
+ E+ KS V ++G PN GKS+++N M+G K+A +S K TT +++ G+ T + QI
Sbjct: 1 MSEQGFKSGFVALVGRPNVGKSTLLNKMIGEKIAIMSPKAQTTRNKIQGIYTTDEGQIVF 60
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMG 251
DTPG ++K S D V+ +A SA+ +++ + + + D +I ++
Sbjct: 61 MDTPG--IHKPHNSLGDFMVK--TAMSALREADMVWFLVNADEPRGAGDDFIINRLKDT- 115
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
K L +NK+DLV DLL + + ++ + IF S LKG G+ L + M
Sbjct: 116 -----KTPVYLIINKIDLVN-PADLLTIIDDYRQQMEFAEIFPISALKGDGVPELLDFAM 169
Query: 312 EQF 314
++
Sbjct: 170 DKM 172
>gi|15613930|ref|NP_242233.1| Era/ThdF family GTP-binding protein [Bacillus halodurans C-125]
gi|13959358|sp|Q9KD52.1|ERA_BACHD RecName: Full=GTPase Era
gi|10173983|dbj|BAB05086.1| GTP-binding protein (Era/ThdF family) [Bacillus halodurans C-125]
Length = 304
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 92/174 (52%), Gaps = 11/174 (6%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
++E KS V IIG PN GKS+++N+++G K+A +S K TT +++ GV T D+QI
Sbjct: 4 QKEGFKSGFVSIIGRPNVGKSTLLNHVIGQKIAIMSDKPQTTRNKIQGVYTSEDSQIVFI 63
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGK 252
DTPG+ K HK ++ A + + ++++ V D P I IER+ +
Sbjct: 64 DTPGIHKPK----HKLGDFMMKVAQNTLKEVDLILYVVDGAEAF-GPGEEFI--IERLKE 116
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
P +L +NK+D V DLL + E ++H +E + S L+G + L
Sbjct: 117 AKTP---VILVINKIDKV-HPDDLLSLIETYRHKHEFEEVVPVSALQGNNVPTL 166
>gi|323526858|ref|YP_004229011.1| GTP-binding protein Era [Burkholderia sp. CCGE1001]
gi|407714300|ref|YP_006834865.1| GTP-binding protein Era [Burkholderia phenoliruptrix BR3459a]
gi|323383860|gb|ADX55951.1| GTP-binding protein Era [Burkholderia sp. CCGE1001]
gi|407236484|gb|AFT86683.1| GTP-binding protein Era [Burkholderia phenoliruptrix BR3459a]
Length = 287
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N +VG KV+ SRK TT H + G+ T D Q DTPG
Sbjct: 2 VAIVGRPNVGKSTLMNALVGQKVSITSRKAQTTRHRITGIHTLEDAQYIFVDTPGFQTKH 61
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S ++ + V S +AV + ++ V + R + D +V+ LI PP +
Sbjct: 62 SSALNRSLNRAVTSTLTAV---DAILFVIEAGR-FGADDQKVLDLI-------PPSVPTL 110
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERI 292
L NK+D V+ K L +Q L + I
Sbjct: 111 LIANKLDRVSDKDSLFPFMQQMSALRPFNEI 141
>gi|206891076|ref|YP_002248190.1| GTP-binding protein Era [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206743014|gb|ACI22071.1| GTP-binding protein Era [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 289
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 95/175 (54%), Gaps = 12/175 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PN GKS++IN ++G KV+ V+ K TT + + G+ + QI DTPG+ +
Sbjct: 6 VALIGRPNVGKSTLINTVIGEKVSIVTEKPQTTRNRITGIKNLPNAQIIFIDTPGIHKPR 65
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
HK + V+ A A+++ + ++VF V +P + + +IER+ K P +
Sbjct: 66 ----HKLGEFMVKEAQEAMDMVD--LIVFMVEPE--APGNDELSIIERLKKLNKP---VI 114
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
L +NK+D V K++LL + E + L ++ I S LK G++ L + ++ D
Sbjct: 115 LAINKIDTVA-KQNLLPLIELYNDLHPFQEIIPISALKKDGIERLVERIIFYLPD 168
>gi|294139710|ref|YP_003555688.1| GTP-binding protein Era [Shewanella violacea DSS12]
gi|293326179|dbj|BAJ00910.1| GTP-binding protein Era [Shewanella violacea DSS12]
Length = 335
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 8/173 (4%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N ++G K++ S+K TT H ++G+ T A+ Q+ DTPGL + +
Sbjct: 44 VAIVGRPNVGKSTLLNKLLGQKISITSKKPQTTRHRIMGIHTVAERQVVFIDTPGLHMEE 103
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
K R+ + +A +L EV +VVF V + D L+ R + +K V
Sbjct: 104 -----KRAINRLMNRAAASSLAEVSLVVFVVDGMTWTEDD---DLVLRKLQSRDDGRKTV 155
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NKVD + K++L E ++ I S KG ++ + +E
Sbjct: 156 LAVNKVDNIKNKEELFPYLEALSKKFPFDEILPISATKGTNVQRILDMSIESL 208
>gi|334705878|ref|ZP_08521744.1| GTPase Era [Aeromonas caviae Ae398]
Length = 299
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N ++G KV+ S+K TT H +LG+ T+ + Q DTPGL + +
Sbjct: 10 VAIVGRPNVGKSTLLNKLLGQKVSITSKKPQTTRHRILGIDTEENHQTIYVDTPGLHIEE 69
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAPPKQKR 260
K R+ + + +L +V MVVF V H T D V +GK K
Sbjct: 70 -----KRAINRLMNRAATSSLGDVAMVVFVVDGTHWTKDDEMV------LGKLRHLKCPV 118
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQY 309
VL +NK+D V +K+DLL E + I S KG ++ + ++
Sbjct: 119 VLAVNKIDNVKEKEDLLPHLEWLGQQMNFAHILPISAEKGTNVEKIREW 167
>gi|427407564|ref|ZP_18897766.1| GTP-binding protein Era [Sphingobium yanoikuyae ATCC 51230]
gi|425714068|gb|EKU77079.1| GTP-binding protein Era [Sphingobium yanoikuyae ATCC 51230]
Length = 302
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 80/143 (55%), Gaps = 10/143 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+Q+ + I+GAPNAGKS+++N +VG KVA S K TT V+GV + D Q+ + DT
Sbjct: 6 ENQRCGVIAIVGAPNAGKSTLVNALVGQKVAITSPKAQTTRTRVMGVAIEGDAQMVLVDT 65
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ + + V++AW ++++++ D L + +I + +A
Sbjct: 66 PGIFAPRRRLD----RAMVQAAWGGAQGADLIVLLVDGKAGLGAKMEPIIAAL-----KA 116
Query: 255 PPKQKRVLCMNKVDLVTKKKDLL 277
P++K L +NKVD+ K+K L+
Sbjct: 117 RPERKW-LVLNKVDIAVKEKLLV 138
>gi|260551499|ref|ZP_05825683.1| GTP-binding protein 16S rRNA-binding, ribosome-associated GTPase
[Acinetobacter sp. RUH2624]
gi|424054690|ref|ZP_17792214.1| GTP-binding protein Era [Acinetobacter nosocomialis Ab22222]
gi|425740715|ref|ZP_18858883.1| GTP-binding protein Era [Acinetobacter baumannii WC-487]
gi|445436624|ref|ZP_21440629.1| GTP-binding protein Era [Acinetobacter baumannii OIFC021]
gi|260405493|gb|EEW98986.1| GTP-binding protein 16S rRNA-binding, ribosome-associated GTPase
[Acinetobacter sp. RUH2624]
gi|407439439|gb|EKF45964.1| GTP-binding protein Era [Acinetobacter nosocomialis Ab22222]
gi|425494738|gb|EKU60937.1| GTP-binding protein Era [Acinetobacter baumannii WC-487]
gi|444754623|gb|ELW79236.1| GTP-binding protein Era [Acinetobacter baumannii OIFC021]
Length = 342
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ Q DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D ++ + D ++E++
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVIDAYKWTQNDD----LVLEKLKNAEM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P +L +NK D K+++L + ++ L + I S L+GA L+ L++ +
Sbjct: 149 PV---ILVINKADTFEDKREILPLIQERTKLMNFAEIVPVSALRGANLEHLSETI 200
>gi|409436624|ref|ZP_11263794.1| membrane-associated, 16S rRNA-binding GTPase [Rhizobium
mesoamericanum STM3625]
gi|408751548|emb|CCM74948.1| membrane-associated, 16S rRNA-binding GTPase [Rhizobium
mesoamericanum STM3625]
Length = 312
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 11/173 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG NAGKS+++N +VG KV+ VS K TT V G+ + QI DTPG+
Sbjct: 19 RSGFVALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAIVRGIAIHDNAQIVFMDTPGI 78
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + V SAW +++M++ D R L ++ ++ +
Sbjct: 79 FKPRRRLD----RAMVTSAWGGAKDADLIMLLIDSERGLRGDAEAILEGLKDV------H 128
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
Q ++L +NK+D V K++DLL +A +++ FM S G+G L YL
Sbjct: 129 QPKILVLNKIDRV-KREDLLALAAAANQNIAFDQTFMISAENGSGCDDLMNYL 180
>gi|381201710|ref|ZP_09908835.1| GTPase Era [Sphingobium yanoikuyae XLDN2-5]
Length = 302
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 80/143 (55%), Gaps = 10/143 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+Q+ + I+GAPNAGKS+++N +VG KVA S K TT V+GV + D Q+ + DT
Sbjct: 6 ENQRCGVIAIVGAPNAGKSTLVNALVGQKVAITSPKAQTTRTRVMGVAIEGDAQMVLVDT 65
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ + + V++AW ++++++ D L + +I + +A
Sbjct: 66 PGIFAPRRRLD----RAMVQAAWGGAQGADLIVLLVDGKAGLGTKMEPIIAAL-----KA 116
Query: 255 PPKQKRVLCMNKVDLVTKKKDLL 277
P++K L +NKVD+ K+K L+
Sbjct: 117 RPERKW-LVLNKVDIAVKEKLLV 138
>gi|385208649|ref|ZP_10035517.1| GTP-binding protein Era [Burkholderia sp. Ch1-1]
gi|385180987|gb|EIF30263.1| GTP-binding protein Era [Burkholderia sp. Ch1-1]
Length = 287
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N +VG KV+ SRK TT H + G+ T D Q DTPG
Sbjct: 2 VAIVGRPNVGKSTLMNALVGQKVSITSRKAQTTRHRITGIHTLEDAQYIFVDTPGFQTKH 61
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
SG ++ + V S ++V+ ++ V + R D +V+ LI PP +
Sbjct: 62 SGALNRSLNRAVTSTLTSVD---AILFVIEAGR-FGPDDQKVLDLI-------PPSVPTL 110
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERI 292
L NK+D V+ K L +Q L + I
Sbjct: 111 LIANKLDRVSDKDSLFPFMQQVSALHKFAEI 141
>gi|407070434|ref|ZP_11101272.1| GTPase Era [Vibrio cyclitrophicus ZF14]
Length = 323
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 12/181 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+Q + I+G PN GKS+++N+++G K++ SRK TT H ++GV T+ D Q DT
Sbjct: 25 ENQHCGFIAIVGRPNVGKSTLLNHILGQKISITSRKPQTTRHRIMGVETEGDYQAIFVDT 84
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQ 253
PGL + + ++ + S+ S VNL V F V H T D V + ++ K
Sbjct: 85 PGLHIEEKRAINRLMNRAANSSLSDVNL-----VFFLVDGTHWTEDDEMV---LNKLRKT 136
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
P VLC+NKVD V + D+++ + + + S +G + L +++ E
Sbjct: 137 DFPV---VLCINKVDNVQDRTDVMQHMMEVSKKMEFVDVVPISAKQGKNIDVLRKHVREH 193
Query: 314 F 314
Sbjct: 194 L 194
>gi|386814853|ref|ZP_10102071.1| GTP-binding protein Era-like-protein [Thiothrix nivea DSM 5205]
gi|386419429|gb|EIJ33264.1| GTP-binding protein Era-like-protein [Thiothrix nivea DSM 5205]
Length = 295
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 12/172 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N+++G KV+A++ K TT H + G++T+ D QI DTPG+
Sbjct: 8 VAIVGRPNVGKSTLMNHLIGFKVSAIANKPQTTRHSIRGILTEGDNQIVFVDTPGIHRTS 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+K + + +A V+ V+M+V + T DS V++ + + K +
Sbjct: 68 KSLLNKTINMEAVAALEGVD--AVVMIVEAL--KWTDEDSLVLQRLAHL------KCPVL 117
Query: 262 LCMNKVDLVTKKKDLLK-VAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L NKVD V KK+ LL + E P + IF S KG + L L++
Sbjct: 118 LVANKVDRVEKKEKLLGWLPEVLAKYP-FREIFPLSATKGTNTEQLKSALIK 168
>gi|383788530|ref|YP_005473099.1| GTP-binding protein Era [Caldisericum exile AZM16c01]
gi|381364167|dbj|BAL80996.1| GTP-binding protein Era [Caldisericum exile AZM16c01]
Length = 294
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 95/175 (54%), Gaps = 11/175 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++NY+V K++ V+ K TT +LGV D QI DTPG
Sbjct: 2 KSGIVTILGRPNVGKSTLLNYLVQRKISIVTPKPQTTRFRILGVKNLKDAQIVFADTPGF 61
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
L KS + V V ++S A +++ ++ +V+ ++ +++ ++ G P
Sbjct: 62 HLAKSALNKYMVNVALKSLDGA----DLVYLMVEVNDYIGEEYPELLKHLK--GLTIP-- 113
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L +NK+D+ K++D+LK E F+ L ++ +F S L G + +L + +E
Sbjct: 114 --VFLVINKIDM-YKEEDILKTEEIFRSLYDFKEVFKISALTGKNVDSLIEKTVE 165
>gi|403668256|ref|ZP_10933531.1| GTP-binding protein Era [Kurthia sp. JC8E]
Length = 300
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 96/179 (53%), Gaps = 15/179 (8%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS + IIG PN GKS+ +N ++G K+A +S K TT ++V GV+T D+Q+ DTPG+
Sbjct: 5 KSGFISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTMDDSQMIFIDTPGI 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K HK + + + +A+ + +M + + + L + D VI +++ G + P
Sbjct: 65 HKPK----HKLGEFMSKVSKNALREVDAIMFMVNAQQKLGAGDEYVIEMLK--GSKTPV- 117
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYLME 312
L +NK+D + +++LK+ +Q+K + I S L+G L L +YL E
Sbjct: 118 ---FLIINKIDTI-HPEEILKIVDQYKEKYDFAEIVPISALQGNNVDNLLNTLKKYLPE 172
>gi|375135606|ref|YP_004996256.1| GTP-binding protein Era [Acinetobacter calcoaceticus PHEA-2]
gi|325123051|gb|ADY82574.1| GTP-binding protein Era [Acinetobacter calcoaceticus PHEA-2]
Length = 340
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ Q DTP
Sbjct: 34 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 93
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D ++ + D ++E++
Sbjct: 94 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVIDAYKWTQNDD----LVLEKLKNAEM 146
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P +L +NK D K+++L + ++ L + I S L+GA L+ L++ +
Sbjct: 147 PV---ILVINKADTFEDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETI 198
>gi|117619280|ref|YP_855344.1| GTP-binding protein Era [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560687|gb|ABK37635.1| GTP-binding protein Era [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 299
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N ++G KV+ S+K TT H +LG+ T+ + Q DTPGL + +
Sbjct: 10 VAIVGRPNVGKSTLLNKLLGQKVSITSKKPQTTRHRILGIDTEENYQTIYVDTPGLHIEE 69
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAPPKQKR 260
K R+ + + +L +V MVVF V H T D V +GK K
Sbjct: 70 -----KRAINRLMNRAATSSLGDVAMVVFMVDGTHWTKDDEMV------LGKLRHLKCPV 118
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQY 309
VL +NK+D V +K+DLL E + I S KG ++ + ++
Sbjct: 119 VLAVNKIDNVKEKEDLLPHLEWLGQQMNFAHILPISAEKGTNVEKIREW 167
>gi|94987086|ref|YP_595019.1| GTP-binding protein Era [Lawsonia intracellularis PHE/MN1-00]
gi|442555923|ref|YP_007365748.1| GTP-binding protein Era [Lawsonia intracellularis N343]
gi|94731335|emb|CAJ54698.1| GTPase [Lawsonia intracellularis PHE/MN1-00]
gi|441493370|gb|AGC50064.1| GTP-binding protein Era [Lawsonia intracellularis N343]
Length = 324
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS++ N VG KVA V+ K TT +++ G++T+ D Q+ DTPG+ K
Sbjct: 21 VALIGPPNAGKSTLTNTFVGQKVAIVTSKPQTTRNKIGGILTQDDMQVIFLDTPGICSEK 80
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPD--SRVIR-LIERMGKQAPPKQ 258
+ + K+ ++SAW + + + ++ V D +L PD R I +E + ++ P
Sbjct: 81 NHVQGQLGKLMLQSAWQGLAIADSIVCVLDGGLYLKKPDLMDRDIEPFVEVLRQEVRPI- 139
Query: 259 KRVLCMNKVDLVTKKKDLL----KVAEQF 283
V+ +NK+D+ K +L K+ E F
Sbjct: 140 --VIVVNKIDVFHDKSRMLPMLAKLGEYF 166
>gi|399046967|ref|ZP_10739155.1| GTP-binding protein Era [Brevibacillus sp. CF112]
gi|433545480|ref|ZP_20501833.1| GTP-binding protein [Brevibacillus agri BAB-2500]
gi|398055117|gb|EJL47209.1| GTP-binding protein Era [Brevibacillus sp. CF112]
gi|432183135|gb|ELK40683.1| GTP-binding protein [Brevibacillus agri BAB-2500]
Length = 305
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 96/179 (53%), Gaps = 11/179 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N++VG K+A +S K TT +++ V T D QI DTPG+
Sbjct: 11 KSGFVSIVGRPNVGKSTLLNHIVGHKIAIMSNKPQTTRNKITAVHTTEDGQIIFLDTPGI 70
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+S + V V A + +N ++++ V D + D + IER+ + P
Sbjct: 71 HKPQSKLGNYMVSV----AENTLNEVDLVLFVVDATEKRGAGDDYI---IERLKQVKTPV 123
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
L +NK+D V + LL + + ++ L +++I S L+G +LT+ +M + ++
Sbjct: 124 ---FLVINKIDKVHPEA-LLPIIDDYRKLYDFKQIVPISALQGNNTSSLTEAIMGEMEE 178
>gi|410980317|ref|XP_003996524.1| PREDICTED: GTPase Era, mitochondrial [Felis catus]
Length = 437
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 53/234 (22%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ + + V ++GAPNAGKS++ N ++G KV VS+K +TT + LG++T+ + Q+ + DT
Sbjct: 109 ENPRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSKKVHTTRCQALGIITEKEAQVILLDT 168
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH----RHLTSPDSRVIRLIERM 250
PGL+ H +E W ++ ++++V+ DV R+ SP +V++ + +
Sbjct: 169 PGLISPVKQKRHHLELSLLEDPWKSMESADMVVVLVDVSDKWTRNQLSP--QVLQCLTQF 226
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKV---------------------AEQFKHLPG- 288
Q P +L MNKVD + +K LL++ ++ H PG
Sbjct: 227 -SQVP----SILVMNKVDCLKQKSILLELTAALTEGVVNGKKLKMREAVRSQAGTHRPGP 281
Query: 289 --------------------YERIFMTSGLKGAGLKALTQYLMEQFKDLGLKIH 322
++ IFM S L +K L QYL+ Q + + H
Sbjct: 282 AAKGPNTQSVGGPQKIGWPHFQEIFMLSALSQEDVKILKQYLLAQARPGPWEFH 335
>gi|116491019|ref|YP_810563.1| GTPase [Oenococcus oeni PSU-1]
gi|290890500|ref|ZP_06553575.1| hypothetical protein AWRIB429_0965 [Oenococcus oeni AWRIB429]
gi|419758833|ref|ZP_14285145.1| GTPase [Oenococcus oeni AWRIB304]
gi|419857741|ref|ZP_14380444.1| GTPase [Oenococcus oeni AWRIB202]
gi|419859529|ref|ZP_14382183.1| GTPase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|421185418|ref|ZP_15642829.1| GTPase [Oenococcus oeni AWRIB318]
gi|421189683|ref|ZP_15646997.1| GTPase [Oenococcus oeni AWRIB422]
gi|421190860|ref|ZP_15648144.1| GTPase [Oenococcus oeni AWRIB548]
gi|421193624|ref|ZP_15650870.1| GTPase [Oenococcus oeni AWRIB553]
gi|421195336|ref|ZP_15652544.1| GTPase [Oenococcus oeni AWRIB568]
gi|421197449|ref|ZP_15654624.1| GTPase [Oenococcus oeni AWRIB576]
gi|116091744|gb|ABJ56898.1| GTPase [Oenococcus oeni PSU-1]
gi|290479896|gb|EFD88545.1| hypothetical protein AWRIB429_0965 [Oenococcus oeni AWRIB429]
gi|399904288|gb|EJN91744.1| GTPase [Oenococcus oeni AWRIB304]
gi|399964599|gb|EJN99240.1| GTPase [Oenococcus oeni AWRIB318]
gi|399971783|gb|EJO06022.1| GTPase [Oenococcus oeni AWRIB553]
gi|399972773|gb|EJO06972.1| GTPase [Oenococcus oeni AWRIB422]
gi|399973556|gb|EJO07721.1| GTPase [Oenococcus oeni AWRIB548]
gi|399975058|gb|EJO09126.1| GTPase [Oenococcus oeni AWRIB576]
gi|399975761|gb|EJO09796.1| GTPase [Oenococcus oeni AWRIB568]
gi|410496546|gb|EKP88029.1| GTPase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|410497212|gb|EKP88687.1| GTPase [Oenococcus oeni AWRIB202]
Length = 305
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 94/182 (51%), Gaps = 10/182 (5%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
+ + KS V IIG PN GKS+++NY++G KVA +S K TT +++ G+ T + Q+ D
Sbjct: 2 DNEYKSGFVAIIGRPNVGKSTLLNYIIGQKVAIISSKAQTTRNKIAGIYTTEEAQVVFLD 61
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG+ Y+ D + ++++ A+N + + V D D+ +I ++++ K
Sbjct: 62 TPGI---HKPYNSLDEYME-KASFGALNEADAVWFVVDATEKRGGGDNFIIERLKKI-KN 116
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFK-HLPGYERIFMTSGLKGAGLKALTQYLME 312
P L +NK+DL+ KK DL + + + ++ S G + AL ++E
Sbjct: 117 TPI----YLLVNKIDLIKKKNDLFQAISSYTVDSLDWSEVYPISAKSGEQVNALVDDVIE 172
Query: 313 QF 314
+
Sbjct: 173 KL 174
>gi|365919898|ref|ZP_09444258.1| ribosome biogenesis GTPase Era [Cardiobacterium valvarum F0432]
gi|364578738|gb|EHM55932.1| ribosome biogenesis GTPase Era [Cardiobacterium valvarum F0432]
Length = 300
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 86/170 (50%), Gaps = 10/170 (5%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
Q++ + ++G PN GKS++IN+++G K+A SRK TT H +LG+ T D Q+ DTPG
Sbjct: 3 QRAGYIAVVGCPNVGKSTLINHLLGQKIAITSRKPQTTRHALLGIHTSGDNQLIFVDTPG 62
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ N+ ++ + +AW +++ ++++ V + D R+ E + KQ+ P
Sbjct: 63 IHQNRDKAINRHMN---RTAWQSMDYVDLILHVSEAGNWTDEDD----RIAEALQKQSKP 115
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
+ +NK+D + K L+ + ++ I S L L L
Sbjct: 116 VLQ---ILNKIDRLRDKSALMPELARIHERGDWQAIIPVSALHKKNLTDL 162
>gi|91784706|ref|YP_559912.1| GTP-binding protein Era [Burkholderia xenovorans LB400]
gi|91688660|gb|ABE31860.1| GTP-binding protein Era [Burkholderia xenovorans LB400]
Length = 299
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N +VG KV+ SRK TT H + G+ T D Q DTPG
Sbjct: 14 VAIVGRPNVGKSTLMNALVGQKVSITSRKAQTTRHRITGIHTLEDAQYIFVDTPGFQTKH 73
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
SG ++ + V S ++V + ++ V + R D +V+ LI PP +
Sbjct: 74 SGALNRSLNRAVTSTLTSV---DAILFVIEAGR-FGPDDQKVLDLI-------PPSVPTL 122
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERI 292
L NK+D V+ K L +Q L + I
Sbjct: 123 LIANKLDRVSDKDSLFPFMQQVSALHKFAEI 153
>gi|402849892|ref|ZP_10898112.1| GTP-binding protein Era [Rhodovulum sp. PH10]
gi|402499831|gb|EJW11523.1| GTP-binding protein Era [Rhodovulum sp. PH10]
Length = 345
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 123 ERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVM 182
E +E E ++ + V +IGAPN GKS+++N MVG+KV+ VS K TT V G+
Sbjct: 36 EPSGDESPEKSPDESRCGFVAVIGAPNVGKSTLVNAMVGSKVSIVSPKVQTTRTLVRGIA 95
Query: 183 TKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSR 242
Q+ DTPG+ L + + + V +AWS + ++ ++V D R L + S
Sbjct: 96 LDGAAQLIFVDTPGIFLPR----RRLERAMVTTAWSGASDADLALLVIDAKRGLDAETSA 151
Query: 243 VIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG 302
++ K A Q ++L +NKVDLV K L + + +M + + G G
Sbjct: 152 ILE------KLAAVPQPKILVINKVDLVAKPALLALAQAANDRV-TFVDTYMIAAITGDG 204
Query: 303 LKALTQYLMEQF 314
+ L +L ++
Sbjct: 205 VADLKAHLADKM 216
>gi|293609825|ref|ZP_06692127.1| GTP-binding protein,16S rRNA-binding [Acinetobacter sp. SH024]
gi|427424847|ref|ZP_18914959.1| GTP-binding protein Era [Acinetobacter baumannii WC-136]
gi|292828277|gb|EFF86640.1| GTP-binding protein,16S rRNA-binding [Acinetobacter sp. SH024]
gi|425698164|gb|EKU67808.1| GTP-binding protein Era [Acinetobacter baumannii WC-136]
Length = 342
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ Q DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D ++ + D ++E++
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVIDAYKWTQNDD----LVLEKLKNAEM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P +L +NK D K+++L + ++ L + I S L+GA L+ L++ +
Sbjct: 149 PV---ILVINKADTFEDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETI 200
>gi|421186334|ref|ZP_15643727.1| GTPase [Oenococcus oeni AWRIB418]
gi|399967287|gb|EJO01769.1| GTPase [Oenococcus oeni AWRIB418]
Length = 305
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 94/182 (51%), Gaps = 10/182 (5%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
+ + KS V IIG PN GKS+++NY++G KVA +S K TT +++ G+ T + Q+ D
Sbjct: 2 DNEYKSGFVAIIGRPNVGKSTLLNYIIGQKVAIISSKAQTTRNKIAGIYTTEEAQVVFLD 61
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG+ Y+ D + ++++ A+N + + V D D+ +I ++++ K
Sbjct: 62 TPGI---HKPYNSLDEYME-KASFGALNEADAVWFVVDATEKRGGGDNFIIERLKKI-KN 116
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFK-HLPGYERIFMTSGLKGAGLKALTQYLME 312
P L +NK+DL+ KK DL + + + ++ S G + AL ++E
Sbjct: 117 TPI----YLLVNKIDLIKKKNDLFQAISSYTVDSLDWSEVYPISAKSGEQVNALVDDVIE 172
Query: 313 QF 314
+
Sbjct: 173 KL 174
>gi|333995158|ref|YP_004527771.1| GTP-binding protein Era [Treponema azotonutricium ZAS-9]
gi|333736928|gb|AEF82877.1| GTP-binding protein Era [Treponema azotonutricium ZAS-9]
Length = 307
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 13/181 (7%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
E+ +KS V ++G P+ GKS+++N + G KVA VS TT + + G+++K D Q+ D
Sbjct: 2 EDKKKSAFVAVVGRPSVGKSTLVNLLCGAKVAIVSSVPQTTRNAIRGIVSKPDGQLVFVD 61
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG ++ + K +E + AV E+++ V D R S + V +I+
Sbjct: 62 TPGRHTSERKLNKK----LMEVSDRAVGDSELILYVLDASRAPGSEEEAVAEMIK----- 112
Query: 254 APPKQKRVLCMNKVDL--VTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
P K ++ +NK+D+ +K ++ + EQ LP E IF S LK G++ L L
Sbjct: 113 -PLIGKTIVAINKMDMQGANAEKAIVFLQEQLPDLP-REHIFNISCLKKEGIEPLLACLF 170
Query: 312 E 312
E
Sbjct: 171 E 171
>gi|421499224|ref|ZP_15946279.1| era [Aeromonas media WS]
gi|407181750|gb|EKE55752.1| era [Aeromonas media WS]
Length = 301
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N ++G KV+ S+K TT H +LG+ T+ + Q DTPGL + +
Sbjct: 12 VAIVGRPNVGKSTLLNKLLGQKVSITSKKPQTTRHRILGIDTEDNYQTIYVDTPGLHIEE 71
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAPPKQKR 260
K R+ + + +L +V MVVF V H T D V +GK K
Sbjct: 72 -----KRAINRLMNRAATSSLGDVAMVVFMVDGTHWTKDDEMV------LGKLRHLKCPV 120
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQY 309
VL +NK+D V +K+DLL E + I S KG ++ + ++
Sbjct: 121 VLAVNKIDNVKEKEDLLPHLEWLGQQMNFAHILPISAEKGTNVEKIREW 169
>gi|345022124|ref|ZP_08785737.1| GTP-binding protein [Ornithinibacillus scapharcae TW25]
Length = 300
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
+ + KS + IIG PN GKS+ +N ++G K+A +S K TT +++ GV+T+ D Q D
Sbjct: 2 DTNYKSGFIAIIGRPNVGKSTFMNKVIGQKIAIMSDKPQTTRNKIQGVLTQNDAQFIFID 61
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG ++K + D V++ A + +N + ++ + + D +I +ER+
Sbjct: 62 TPG--IHKPKHRLGDFMVKI--AENTLNEVDAVLFMINADEGYGRGDQFIIDRLERV--- 114
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
K L +NK+DLV K LL + E +K +E I S L+G + L L E
Sbjct: 115 ---KSPVFLVVNKIDLVHPDK-LLPLIEFYKDKYDFEEIIPISALQGNNVNRLLDVLKEH 170
Query: 314 F 314
Sbjct: 171 L 171
>gi|330828483|ref|YP_004391435.1| GTP-binding protein era [Aeromonas veronii B565]
gi|406678311|ref|ZP_11085488.1| GTPase Era [Aeromonas veronii AMC35]
gi|423200976|ref|ZP_17187556.1| GTPase Era [Aeromonas veronii AER39]
gi|423203830|ref|ZP_17190386.1| GTPase Era [Aeromonas veronii AMC34]
gi|423210832|ref|ZP_17197385.1| GTPase Era [Aeromonas veronii AER397]
gi|328803619|gb|AEB48818.1| GTP-binding protein era [Aeromonas veronii B565]
gi|404614550|gb|EKB11530.1| GTPase Era [Aeromonas veronii AER397]
gi|404617959|gb|EKB14880.1| GTPase Era [Aeromonas veronii AER39]
gi|404622740|gb|EKB19600.1| GTPase Era [Aeromonas veronii AMC35]
gi|404628522|gb|EKB25302.1| GTPase Era [Aeromonas veronii AMC34]
Length = 299
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N ++G KV+ S+K TT H +LG+ T+ + Q DTPGL + +
Sbjct: 10 VAIVGRPNVGKSTLLNKLLGQKVSITSKKPQTTRHRILGIDTEDNYQTIYVDTPGLHIEE 69
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAPPKQKR 260
K R+ + + +L +V MVVF V H T D V +GK K
Sbjct: 70 -----KRAINRLMNRAATSSLGDVAMVVFMVDGTHWTKDDEMV------LGKLRNLKCPV 118
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQY 309
VL +NK+D V +K+DLL E + I S KG ++ + ++
Sbjct: 119 VLAVNKIDNVKEKEDLLPHLEWLGQQMNFAHILPISAEKGTNVEKIREW 167
>gi|223044391|ref|ZP_03614425.1| GTP-binding protein Era [Staphylococcus capitis SK14]
gi|314933739|ref|ZP_07841104.1| GTP-binding protein Era [Staphylococcus caprae C87]
gi|417907958|ref|ZP_12551725.1| ribosome biogenesis GTPase Era [Staphylococcus capitis VCU116]
gi|222442260|gb|EEE48371.1| GTP-binding protein Era [Staphylococcus capitis SK14]
gi|313653889|gb|EFS17646.1| GTP-binding protein Era [Staphylococcus caprae C87]
gi|341595045|gb|EGS37723.1| ribosome biogenesis GTPase Era [Staphylococcus capitis VCU116]
Length = 300
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 92/176 (52%), Gaps = 11/176 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DT
Sbjct: 3 EEHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDT 62
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG ++K + D +RV A + ++ + +M + +V+ + D ++ +++ +
Sbjct: 63 PG--IHKPKHKLGDYMMRV--AKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNV---- 114
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV L+ E++K + I S L+G + L
Sbjct: 115 --KTPIFLVLNKIDLVHPDA-LMPRIEKYKEYMDFTEIIPISALEGLNVDHFIDVL 167
>gi|407716338|ref|YP_006837618.1| GTP-binding protein [Cycloclasticus sp. P1]
gi|407256674|gb|AFT67115.1| GTP-binding protein [Cycloclasticus sp. P1]
Length = 300
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 10/174 (5%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V +IGAPNAGKS+++N ++G K++ SR+ TT H +LG+ T +Q+ DTPG+
Sbjct: 7 KSGFVALIGAPNAGKSTLLNNILGQKISITSRRPQTTRHRILGIKTTEASQVVYVDTPGM 66
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
L +K + +++ V++ ++ V D+ D+ I ++E++ + P
Sbjct: 67 HLGGKRALNKYLNKTADTSLMGVDV--IVWVKDDMQW-----DAIDISILEKLKNEGAP- 118
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
VL +NK+D V K+ LL ++ ++ I S L G L Q L+
Sbjct: 119 --VVLAINKIDKVADKESLLPFIQKISLEHDFQSIIPISALTGKQLGEFEQLLL 170
>gi|260425485|ref|ZP_05779465.1| GTP-binding protein Era [Citreicella sp. SE45]
gi|260423425|gb|EEX16675.1| GTP-binding protein Era [Citreicella sp. SE45]
Length = 301
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 9/172 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ +IG PNAGKS++ N MVG KV+ V+ K TT + GV + D+Q+ DTPGL +
Sbjct: 8 IALIGEPNAGKSTLTNRMVGAKVSIVTHKVQTTRARIRGVAMEGDSQLIFVDTPGLFKPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW ++++++ + HR +T R+I + + P +K
Sbjct: 68 RRLD----RAMVAAAWGGAADADIIVLLIEAHRGITEGVERIIEGLAEL----PRGRKVA 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
L +NK+D V + LL +++ + FM S +G G+ L ++L E+
Sbjct: 120 LAINKIDRV-EAPVLLALSKDLNDRYAFANTFMISAERGYGVADLRKWLAEE 170
>gi|58617284|ref|YP_196483.1| GTP-binding protein Era [Ehrlichia ruminantium str. Gardel]
gi|81311297|sp|Q5FFN4.1|ERA_EHRRG RecName: Full=GTPase Era
gi|58416896|emb|CAI28009.1| GTP-binding protein Era homolog [Ehrlichia ruminantium str. Gardel]
Length = 296
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 11/170 (6%)
Query: 143 GIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKS 202
I+G NAGKS+++N +VG KVAAV+ K TT + V + Q+ DTPG+ K+
Sbjct: 12 AIVGTTNAGKSTLVNVLVGQKVAAVTPKVQTTRVRMHAVSNHENVQLIFIDTPGIFSPKT 71
Query: 203 GYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVL 262
K K V+ AW ++ E ++V+ DV +L ++I I+ A +L
Sbjct: 72 ----KLEKFLVKHAWMSLKGIENVIVLVDVKNYLNQHLKKIIDRIKHSNLNA------IL 121
Query: 263 CMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
+NK+D+V + + +V E L + + F S L G G+ L YL E
Sbjct: 122 VLNKIDIV-HQSIVSEVIEYMYSLYKFSKAFTISALYGIGIDKLVDYLCE 170
>gi|254512246|ref|ZP_05124313.1| GTP-binding protein Era [Rhodobacteraceae bacterium KLH11]
gi|221535957|gb|EEE38945.1| GTP-binding protein Era [Rhodobacteraceae bacterium KLH11]
Length = 302
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ +IG PNAGKS+++N MVG KV+ V+ K TT + GV + + Q+ DTPGL +
Sbjct: 8 IALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGEAQLVFVDTPGLFKPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW +V++++ + HR +T R++ +E +G+ +
Sbjct: 68 RRLD----RAMVAAAWGGAADADVVVLMVEAHRGITEGVERILEGLEEIGQ----GRTIA 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+D V +K L ++ P + FM S KG G+ L Q+L +
Sbjct: 120 LAINKIDKVPSEKLLALTSDLNARYP-FAETFMISAEKGHGVDDLRQWLASEL 171
>gi|254481405|ref|ZP_05094650.1| GTP-binding protein Era [marine gamma proteobacterium HTCC2148]
gi|214038568|gb|EEB79230.1| GTP-binding protein Era [marine gamma proteobacterium HTCC2148]
Length = 299
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 92/170 (54%), Gaps = 10/170 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N+++G K++ SRK TT H+VLG+ T+ D+Q+ DTPGL +
Sbjct: 11 VAIVGRPNVGKSTLLNHILGQKISITSRKPQTTRHQVLGIKTENDSQVIFVDTPGLHKAE 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
++ + SA V+L ++F + R + + +++ +E++ + P +
Sbjct: 71 EKAINRYMNRAASSAIKHVDL-----ILFLIDRTAWTEEDQMV--LEQVQRTRIPT---L 120
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
L +NKVDL+ K LL ++ +E I S L+ + L Q ++
Sbjct: 121 LVVNKVDLLEDKNILLPHLQELADRGEFEAIVPVSALRQRNVDMLEQEIL 170
>gi|346991599|ref|ZP_08859671.1| GTPase Era [Ruegeria sp. TW15]
Length = 302
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ +IG PNAGKS+++N MVG KV+ V+ K TT + GV + D Q+ DTPGL +
Sbjct: 8 IALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGDAQLVFVDTPGLFKPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW +V++++ + HR +T R++ +E +G+ +
Sbjct: 68 RRLD----RAMVAAAWGGAADADVVVLMVEAHRGITEGVERILEGLEEIGQ----GRTIA 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+D V +K L ++ P + FM S KG G+ L ++L +
Sbjct: 120 LAINKIDKVPSEKLLALTSDLNARYP-FAETFMISAEKGHGVDDLRKWLASEL 171
>gi|187924874|ref|YP_001896516.1| GTP-binding protein Era [Burkholderia phytofirmans PsJN]
gi|187716068|gb|ACD17292.1| GTP-binding protein Era [Burkholderia phytofirmans PsJN]
Length = 299
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N +VG KV+ SRK TT H + G+ T D Q DTPG
Sbjct: 14 VAIVGRPNVGKSTLMNALVGQKVSITSRKAQTTRHRITGIHTLDDAQYIFVDTPGFQTKH 73
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
SG ++ + V S ++V + ++ V + R D +V+ LI PP +
Sbjct: 74 SGALNRSLNRAVTSTLTSV---DAILFVIEAGR-FGPDDQKVLDLI-------PPSVPTL 122
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERI 292
L NK+D V+ K L +Q L + I
Sbjct: 123 LIANKLDRVSDKDSLFPFMQQVSALHKFAEI 153
>gi|375107379|ref|ZP_09753640.1| GTP-binding protein Era [Burkholderiales bacterium JOSHI_001]
gi|374668110|gb|EHR72895.1| GTP-binding protein Era [Burkholderiales bacterium JOSHI_001]
Length = 306
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 86/185 (46%), Gaps = 19/185 (10%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
Q V I+G PN GKS+++N +VG K++ SRK TT H + GV T +Q DTPG
Sbjct: 12 QHCGLVAIVGRPNVGKSTLLNALVGQKISITSRKAQTTRHRITGVCTVGPSQFIFVDTPG 71
Query: 197 LMLNKSGYS----HKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGK 252
G ++++ V+ A S V+L V+ V PD E++
Sbjct: 72 FQTQNLGRGRTALNRNLNRTVQGALSDVDL-----VLLMVEAGKFGPDD------EKVLA 120
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL----TQ 308
PP + VL NK+DL+ ++ DLL ++ + + S K A +K L
Sbjct: 121 LVPPGKPCVLVANKLDLINRRSDLLPWLQKMQLRHHFAEFVPMSAEKAAEVKRLFDIVAP 180
Query: 309 YLMEQ 313
YL EQ
Sbjct: 181 YLPEQ 185
>gi|374619729|ref|ZP_09692263.1| GTP-binding protein Era [gamma proteobacterium HIMB55]
gi|374302956|gb|EHQ57140.1| GTP-binding protein Era [gamma proteobacterium HIMB55]
Length = 302
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D + V ++G PN GKS+++N+++ K++ SRK TT +VLGV T Q+ DTP
Sbjct: 6 DTRCGLVALVGRPNVGKSTLLNFLLEQKLSITSRKPQTTRQQVLGVKTVGRDQMIFVDTP 65
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHR-HLTSPDSRVIRLIERMGKQA 254
GL N+ +K + SA S V+L V+F + R T DS V+ IE +A
Sbjct: 66 GLHRNEPKAINKAMNRSATSAMSDVDL-----VLFLIDRGKWTEEDSWVLEKIE--SAKA 118
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
P L +NK+DL+ LL E + + +F S L+ L L ++ +Q
Sbjct: 119 PV----ALVINKMDLLDDPNTLLPELEALQARANFAGVFPVSALRQKNLDVLESFVRDQL 174
>gi|299144155|ref|ZP_07037235.1| GTP-binding protein Era [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298518640|gb|EFI42379.1| GTP-binding protein Era [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 296
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 95/177 (53%), Gaps = 13/177 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V IIG PN GKS+++N +VG K++A+S K TT +++ + T Q+ DTPG+
Sbjct: 3 KSGFVTIIGRPNVGKSTLLNCIVGQKISAISNKAQTTRNKITFIYTDEKMQVIFLDTPGI 62
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ K+ +KV ES S V +V+ + D + + D+ +I+ ++ + P
Sbjct: 63 QMPKNKLGDYMLKVS-ESTLSEV---DVITYIVDCSKKIGKLDNYIIKELKEKNLKTPI- 117
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYL 310
VL +NK+D V K++L ++ + + + ++ I S LK G LK L +Y+
Sbjct: 118 ---VLLVNKIDEVA-KEELFEIIKMYDDIGIFKEIIPISALKNDGVESYLKTLAKYI 170
>gi|294678826|ref|YP_003579441.1| GTP-binding protein Era [Rhodobacter capsulatus SB 1003]
gi|294477646|gb|ADE87034.1| GTP-binding protein Era [Rhodobacter capsulatus SB 1003]
Length = 303
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 9/179 (5%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ ++ V +IG PNAGKS+++N MVG KV+ V+ K TT + GV Q+ DT
Sbjct: 3 EETQAGFVALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVCMAGTAQLVFVDT 62
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ + + V +AW ++++++ + HR LT +I + K
Sbjct: 63 PGIFRPRRRLD----RAMVSAAWGGAADADIVVLLIEAHRGLTEGAKAIIEAL----KAR 114
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
Q L +NK+D V K + LL +AE+ + + FM S KG G+ L +L Q
Sbjct: 115 EGTQPVALAINKIDRV-KAERLLALAEEMNAAFPFAKTFMISAEKGYGVDDLRDWLASQ 172
>gi|424880854|ref|ZP_18304486.1| GTP-binding protein Era [Rhizobium leguminosarum bv. trifolii WU95]
gi|392517217|gb|EIW41949.1| GTP-binding protein Era [Rhizobium leguminosarum bv. trifolii WU95]
Length = 313
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N +VG KV+ VS K TT V G+ + QI DTPG+ +
Sbjct: 24 VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAIVRGIAIHDNAQIVFMDTPGIFKPR 83
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW ++++++ D R L ++ ++ + +Q ++
Sbjct: 84 RRLD----RAMVTSAWGGARDADLIVLLIDSERGLRGDAEAILEGLKEV------RQPKI 133
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V ++DLL +A +ER FM S G+G L YL
Sbjct: 134 LLLNKIDRVN-REDLLALAAAANEKIAFERTFMISAENGSGCDDLMDYL 181
>gi|241203890|ref|YP_002974986.1| GTP-binding protein Era [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240857780|gb|ACS55447.1| GTP-binding protein Era [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 313
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N +VG KV+ VS K TT V G+ + QI DTPG+ +
Sbjct: 24 VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAIVRGIAIHDNAQIVFMDTPGIFKPR 83
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW ++++++ D R L ++ ++ + +Q ++
Sbjct: 84 RRLD----RAMVTSAWGGARDADLIVLLIDSERGLRGDAEAILEGLKEV------RQPKI 133
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V ++DLL +A +ER FM S G+G L YL
Sbjct: 134 LLLNKIDRVN-REDLLALAAAANEKIAFERTFMISAENGSGCDDLMDYL 181
>gi|418322682|ref|ZP_12933996.1| GTP-binding protein Era [Staphylococcus pettenkoferi VCU012]
gi|365231129|gb|EHM72188.1| GTP-binding protein Era [Staphylococcus pettenkoferi VCU012]
Length = 299
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 91/175 (52%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKPQTTRNKIQGVMTQEDAQIIFLDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D +RV A + + + +M + +++ + D ++ +++ +
Sbjct: 63 G--IHKPKHKLGDYMMRV--ARNTLAEIDAIMFMVNINEEIGRGDEYIMEMLKHVDTPV- 117
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+DLV DL+ EQ++ + I S L+G + + L
Sbjct: 118 -----FLVLNKIDLV-HPDDLMPKIEQYQTYMDFTEIVPISALEGHNVDHFIEVL 166
>gi|53715372|ref|YP_101364.1| GTP-binding protein Era [Bacteroides fragilis YCH46]
gi|52218237|dbj|BAD50830.1| putative GTP-binding protein [Bacteroides fragilis YCH46]
Length = 293
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 98/181 (54%), Gaps = 16/181 (8%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
K+ V I+G PN GKS+++N +VG +++ + K TT H ++G+ D QI DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNVLVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPG 61
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
++ K Y ++ + + SA+ +VL+ V DV + +PD I+++ +Q+ P
Sbjct: 62 VL--KPNYKLQESMLNFST--SALADADVLLYVTDV---IETPDKNN-EFIQKVRQQSAP 113
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
+L +NK+DL ++K L+K+ E +K L I S A K Y+M++ KD
Sbjct: 114 ---ILLLINKIDLTDQEK-LVKLVEGWKELLPQAEIIPIS----AATKFNVDYVMKRIKD 165
Query: 317 L 317
L
Sbjct: 166 L 166
>gi|422911284|ref|ZP_16945910.1| GTP-binding protein Era [Vibrio cholerae HE-09]
gi|341631803|gb|EGS56680.1| GTP-binding protein Era [Vibrio cholerae HE-09]
Length = 324
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 94/192 (48%), Gaps = 12/192 (6%)
Query: 124 RQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMT 183
R E + EDQ V I+G PN GKS+++N ++G K++ SRK TT H ++GV T
Sbjct: 15 RSEGQTATSTPEDQHCGFVAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVET 74
Query: 184 KADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRV 243
+ Q DTPGL + + ++ + S+ S VNL VL VV H T+ D V
Sbjct: 75 EGKYQAIYVDTPGLHIEEKRAINRLMNRAASSSLSDVNL--VLFVVEGT--HWTADDEMV 130
Query: 244 IRLIERMGKQAPPKQKRVLCMNKVDLVTKKKD-LLKVAEQFKHLPGYERIFMTSGLKGAG 302
+++ VLC+NKVD V + + +L + E K +P + I S +G
Sbjct: 131 FNKLQKANFPV------VLCVNKVDQVKDRNEVMLHMLELSKRMP-FVDIVPISAKQGKN 183
Query: 303 LKALTQYLMEQF 314
L +++ +
Sbjct: 184 TDVLKKHVRDHL 195
>gi|260583651|ref|ZP_05851399.1| GTP-binding protein Era [Granulicatella elegans ATCC 700633]
gi|260158277|gb|EEW93345.1| GTP-binding protein Era [Granulicatella elegans ATCC 700633]
Length = 302
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 11/173 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+ +NY++G K+A +S K TT +++ GV T D QI DTPG+
Sbjct: 6 KSGFVAIVGRPNVGKSTFMNYVLGQKIAIMSDKAQTTRNKIQGVYTNQDCQIVFLDTPGI 65
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K H+ VESA+SA+ + ++ + + D +I ++++ K
Sbjct: 66 HKPK----HELGNFMVESAYSALKEVDAVLFMVNAAEKRGPGDDFIIEKLKKI------K 115
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+DL++ +LL E ++ + I S L+G ++ L L
Sbjct: 116 TPVFLVLNKIDLIS-PDELLDRVESYQETIPFAGIIPISVLQGNNVQELMTTL 167
>gi|408374674|ref|ZP_11172358.1| GTP-binding protein Era [Alcanivorax hongdengensis A-11-3]
gi|407765482|gb|EKF73935.1| GTP-binding protein Era [Alcanivorax hongdengensis A-11-3]
Length = 303
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N+++G KV+ SRK TT H + G++++ Q+ DTPG+
Sbjct: 13 VAIVGRPNVGKSTLMNHLIGQKVSITSRKPQTTRHRIHGILSRDHYQMVFADTPGI---H 69
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+G + E+A SA++ +V+ ++ D + T D V+ L+ + P+ +
Sbjct: 70 TGQERALNRAMNEAAISALSGVDVICMMVDALK-WTPADEHVLSLLPQ-----KPEAPVL 123
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NKVD + K LL + ++ + S L+ L+ L Q L+E+
Sbjct: 124 LIINKVDNLDDKSQLLPHIQALSERYPFDAVVPVSALREKNLEELEQALVERL 176
>gi|163791428|ref|ZP_02185837.1| GTP-binding protein Era [Carnobacterium sp. AT7]
gi|159873292|gb|EDP67387.1| GTP-binding protein Era [Carnobacterium sp. AT7]
Length = 299
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 96/181 (53%), Gaps = 15/181 (8%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V I+G PN GKS+++N +VG K+A +S K TT +++ G+ T ++QI DTP
Sbjct: 3 EHKSGFVSIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTTPESQIVFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K H+ V+SA+SA +V++ + ++ D+ + +ER+
Sbjct: 63 GIHKPK----HRLGDFMVDSAFSAFREVDVILFMVNIAEKRGPGDNFI---MERLKTVKS 115
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL----TQYLM 311
P L +NK+D + + LL + E ++ L +E++ S G ++ L T+YL
Sbjct: 116 PV---FLVLNKIDKIHPDQ-LLPIIEDYRSLVDFEQVIPISAADGNNVETLLSEVTKYLP 171
Query: 312 E 312
E
Sbjct: 172 E 172
>gi|406903550|gb|EKD45593.1| hypothetical protein ACD_69C00217G0004, partial [uncultured
bacterium]
Length = 231
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 87/165 (52%), Gaps = 10/165 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++NY++G KV+ +RKT TT H++LG+ T D Q DTPG+
Sbjct: 11 ITILGRPNVGKSTLLNYILGKKVSITARKTQTTRHKILGIKTTGDYQAIYVDTPGIHNRS 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
++ + SA S V++ + MVV + + D V++++++ K +
Sbjct: 71 DSKLNRYMNNAALSALSDVDVV-IFMVVGTIWQE---EDEFVLKMLQK------TKSPVI 120
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
L +NKVDLV +K LL ++ + I S G+ + +L
Sbjct: 121 LAINKVDLVAQKNLLLSYIQKISQKYKFTAIIPLSAKDGSNIASL 165
>gi|307730526|ref|YP_003907750.1| GTP-binding protein Era [Burkholderia sp. CCGE1003]
gi|307585061|gb|ADN58459.1| GTP-binding protein Era [Burkholderia sp. CCGE1003]
Length = 287
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N +VG KV+ SRK TT H + G+ T D Q DTPG
Sbjct: 2 VAIVGRPNVGKSTLMNALVGQKVSITSRKAQTTRHRITGIHTLEDAQYIFVDTPGFQTKH 61
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S ++ + V S +AV + ++ V + R + D +V+ LI PP +
Sbjct: 62 SSALNRSLNRAVTSTLTAV---DAILFVIEAGR-FGADDQKVLDLI-------PPSVPTL 110
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERI 292
L NK+D V+ K L +Q L + I
Sbjct: 111 LIANKLDRVSDKDSLYPFMQQMSALRPFNEI 141
>gi|56695595|ref|YP_165946.1| GTP-binding protein Era [Ruegeria pomeroyi DSS-3]
gi|56677332|gb|AAV93998.1| GTP-binding protein Era [Ruegeria pomeroyi DSS-3]
Length = 301
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N MVG KV+ V+ K TT + GV + + QI DTPGL +
Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRTRIRGVAMEGEAQIVFVDTPGLFQPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW ++++++ + HR +T R++ + + K +
Sbjct: 68 RRLD----RAMVAAAWGGAADADIVVLMIEAHRGITEGVERILEGLAEIAK----GRTVA 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+D V +K LL ++E + R FM S +G G++ L ++L +
Sbjct: 120 LAINKIDRVPAEK-LLGLSEALNARFEFARTFMISAERGHGVEDLRKWLAAEL 171
>gi|343500462|ref|ZP_08738355.1| GTPase Era [Vibrio tubiashii ATCC 19109]
gi|418481440|ref|ZP_13050483.1| GTPase Era [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342820306|gb|EGU55130.1| GTPase Era [Vibrio tubiashii ATCC 19109]
gi|384570957|gb|EIF01500.1| GTPase Era [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 325
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 12/188 (6%)
Query: 128 EEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADT 187
+E+ E+Q V I+G PN GKS+++N ++G K++ SRK TT H ++GV T+ D
Sbjct: 20 DEQTSSPENQHCGFVAIVGRPNVGKSTLLNRILGQKISITSRKPQTTRHRIMGVDTEGDY 79
Query: 188 QICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRL 246
Q DTPGL + + ++ + S+ S VNL V F V H T+ D V
Sbjct: 80 QAIFVDTPGLHIEEKRAINRLMNRAANSSLSDVNL-----VFFLVDGTHWTADDEMV--- 131
Query: 247 IERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
+ ++ K P VLC+NKVD+V + +++ ++ + + S G + L
Sbjct: 132 LTKLQKSNFPV---VLCVNKVDVVQDRNEVMMHMQEVSRKMDFVDVVPISAKHGKNIDVL 188
Query: 307 TQYLMEQF 314
+++ +
Sbjct: 189 RKHVRDHL 196
>gi|404493025|ref|YP_006717131.1| GTP-binding protein Era [Pelobacter carbinolicus DSM 2380]
gi|77545089|gb|ABA88651.1| GTP-binding protein Era [Pelobacter carbinolicus DSM 2380]
Length = 303
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 25/192 (13%)
Query: 130 EEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQI 189
E E+ +S V IIG PN GKS+++N ++G K+A S K TT + +LG+ + D Q+
Sbjct: 4 ENRSEKPFRSGFVAIIGRPNVGKSTLLNSVLGQKIAITSNKPQTTRNRILGIYNQPDAQV 63
Query: 190 CIFDTPGL-----MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVI 244
DTPG+ MLN+ V+ A S +V++++ + + L D V+
Sbjct: 64 LFLDTPGVHKAKGMLNRY---------MVDQALSTCGDVDVVLMLVEANDRLGGGDDYVL 114
Query: 245 RLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG-- 302
+ R P +L +NKVDL+ + +LL + E + + I S L G G
Sbjct: 115 EQVSR--SNVPV----ILVINKVDLI-HRPELLPLIEAYTGKYAFSEIIPVSALTGEGTE 167
Query: 303 --LKALTQYLME 312
+ +L +YL E
Sbjct: 168 QLVSSLVKYLPE 179
>gi|388568497|ref|ZP_10154914.1| GTP-binding protein Era [Hydrogenophaga sp. PBC]
gi|388264301|gb|EIK89874.1| GTP-binding protein Era [Hydrogenophaga sp. PBC]
Length = 337
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 83/166 (50%), Gaps = 11/166 (6%)
Query: 111 RALAKALLQAALERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRK 170
RAL K A + E EV E D++ V I+G PN GKS+++N +VG KV+ SRK
Sbjct: 21 RALGKPAAADAADAPEAPHPEVAEADKRCGYVAIVGKPNVGKSTLLNALVGQKVSITSRK 80
Query: 171 TNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVF 230
TT H + G+ T+ +Q DTPG ++ + V A + V+L +L VV
Sbjct: 81 AQTTRHRITGIRTEGASQFIFVDTPGFQTRHGNALNRSLNKTVLGAVTDVDL--ILFVVE 138
Query: 231 DVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDL 276
+L D++V+ L+ P +L NK+D V ++ DL
Sbjct: 139 AGRFNLA--DAKVLSLL-------PASAPVILLANKLDEVHRRGDL 175
>gi|88858203|ref|ZP_01132845.1| GTP-binding protein era [Pseudoalteromonas tunicata D2]
gi|88819820|gb|EAR29633.1| GTP-binding protein era [Pseudoalteromonas tunicata D2]
Length = 299
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 82/146 (56%), Gaps = 18/146 (12%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+I+N +VG KV+ SRK TT H ++G+ T+ D Q DTPGL + +
Sbjct: 10 IAIVGRPNVGKSTILNEIVGQKVSITSRKAQTTRHRIMGIHTEGDYQAVYVDTPGLHIEE 69
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAPPKQKR 260
K R+ + +A ++ +V +++F V H T+ D V+ +++ G+
Sbjct: 70 -----KRAINRLMNRAAASSISDVELIIFVVEGTHWTADDDMVLHKVKQTGRPV------ 118
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHL 286
+L +NKVD V +K++L F HL
Sbjct: 119 LLVINKVDQVKEKEEL------FPHL 138
>gi|282600806|ref|ZP_05979765.2| GTP-binding protein Era [Subdoligranulum variabile DSM 15176]
gi|282570996|gb|EFB76531.1| ribosome biogenesis GTPase Era [Subdoligranulum variabile DSM
15176]
Length = 296
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 13/173 (7%)
Query: 139 SVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLM 198
SV V ++G PN GKSS+ NY+VG KVA V++K TT + GV+TK Q + DTPG+
Sbjct: 4 SVFVALVGRPNVGKSSLTNYLVGEKVAIVTKKPQTTRSRITGVITKGPVQYVLMDTPGIH 63
Query: 199 LNKSGYSHKDVKVRV-ESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+H + R+ ++A +++ +V M++F+ LT + +I+ +++ G
Sbjct: 64 -----KAHNKLDARMTQTAAASLKDVDVTMMLFEPEGELTDSELTMIKALQKGGPA---- 114
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ +NKVDL+ L + Q ++ + S G G + L L
Sbjct: 115 ---IAVINKVDLLDSFAALEQRKRQVADFRCFDAVVTVSAKDGTGCEELFTLL 164
>gi|323491197|ref|ZP_08096383.1| GTPase Era [Vibrio brasiliensis LMG 20546]
gi|323314565|gb|EGA67643.1| GTPase Era [Vibrio brasiliensis LMG 20546]
Length = 325
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 12/150 (8%)
Query: 129 EEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQ 188
E+ E+Q V I+G PN GKS+++N ++G K++ SRK TT H ++GV T+ D Q
Sbjct: 21 EQASSPENQHCGFVAIVGRPNVGKSTLLNRILGQKISITSRKPQTTRHRIMGVDTEGDYQ 80
Query: 189 ICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLI 247
DTPGL + + ++ + S+ S VNL V F V H TS D V +
Sbjct: 81 AIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNL-----VFFLVDGTHWTSDDEMV---L 132
Query: 248 ERMGKQAPPKQKRVLCMNKVDLVTKKKDLL 277
++ K P VLC+NKVD V + D++
Sbjct: 133 TKLQKSNFPV---VLCVNKVDNVQDRNDVM 159
>gi|293376339|ref|ZP_06622576.1| GTP-binding protein Era [Turicibacter sanguinis PC909]
gi|325843413|ref|ZP_08167971.1| ribosome biogenesis GTPase Era [Turicibacter sp. HGF1]
gi|292645028|gb|EFF63101.1| GTP-binding protein Era [Turicibacter sanguinis PC909]
gi|325489335|gb|EGC91709.1| ribosome biogenesis GTPase Era [Turicibacter sp. HGF1]
Length = 302
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 11/179 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
E+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GV+T AD+Q D
Sbjct: 3 EKHFKSGFVSIIGRPNVGKSTFLNQVLGKKIAIMSDKPQTTRNKIQGVITDADSQTIFID 62
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG+ K H+ K + A +N + +M + + + D +I ++ +
Sbjct: 63 TPGIHKPK----HELGKFMTDLAIGTLNEVDAVMFMVNATEKVGKGDRFIIEHLQNV--- 115
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
KQ L +NK+DL+T K++LL V F+ + I S + G ++ L + E
Sbjct: 116 ---KQPVFLVINKIDLIT-KEELLTVIASFREEYNFAGIIPISAMTGENVETLISVIKE 170
>gi|218441386|ref|YP_002379715.1| GTP-binding protein Era [Cyanothece sp. PCC 7424]
gi|218174114|gb|ACK72847.1| GTP-binding protein Era [Cyanothece sp. PCC 7424]
Length = 318
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 91/185 (49%), Gaps = 14/185 (7%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
+ E KS V IIG PN GKS+++N +VG K+A S TT + + G++T ++ QI
Sbjct: 18 IAPEGFKSGFVAIIGRPNVGKSTLMNQLVGQKIAITSPVAQTTRNRLQGILTTSEAQIIF 77
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMG 251
DTPG+ H+ KV V++A A+N +++++V D D +I L+E
Sbjct: 78 VDTPGI----HKPHHELGKVLVKNAQMAINAVDLVLLVADSSIEAGGGDRYIIDLLEET- 132
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMT--SGLKGAGLKALTQY 309
K +L +NK D D L E ++ L + + M S L G+GL L
Sbjct: 133 -----KTPVILGLNKSDQQPANFDPLD--ESYRQLAQFHQWPMVKFSALTGSGLDLLQSL 185
Query: 310 LMEQF 314
L+E
Sbjct: 186 LVEHL 190
>gi|433448754|ref|ZP_20411620.1| GTPase Era [Weissella ceti NC36]
gi|429539681|gb|ELA07717.1| GTPase Era [Weissella ceti NC36]
Length = 302
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 92/180 (51%), Gaps = 11/180 (6%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
+ E+ KS V I+G PN GKS+++N M+G K+A +S K TT +++ G+ T D QI
Sbjct: 1 MSEQAFKSGFVAIVGRPNVGKSTLMNEMIGEKIAIMSPKAQTTRNKIQGIYTNDDGQIVF 60
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMG 251
DTPG+ ++G V++A S++ +++ V + + + D +I ++ +
Sbjct: 61 IDTPGIHKPQNGLG----DFMVKTAMSSLGEADMIWFVVNADQKRGAGDDFIINRLKTVD 116
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
L +NKVDLV ++LL + + ++ + IF S L G G+ L M
Sbjct: 117 TPV------YLIINKVDLV-HPQELLAIIDDYRQQMEFAEIFPISALDGDGVPELLNVTM 169
>gi|404417997|ref|ZP_10999779.1| GTPase Era [Staphylococcus arlettae CVD059]
gi|403489713|gb|EJY95276.1| GTPase Era [Staphylococcus arlettae CVD059]
Length = 298
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 15/181 (8%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 2 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTEDDAQIIFLDTP 61
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D +RV A + ++ + +M + +++ + D ++ +++ +
Sbjct: 62 G--IHKPKHKLGDYMMRV--AKNTLSEIDAIMFMVNINEDIGRGDEFIMEMLKTI----- 112
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYLM 311
K L +NK+DLV +L+ EQ++ + I S L+G L L YL
Sbjct: 113 -KTPVFLVLNKIDLV-HPDELMPRIEQYQKYMDFTEIVPISALEGHNVDHFLSVLKSYLP 170
Query: 312 E 312
E
Sbjct: 171 E 171
>gi|297626088|ref|YP_003687851.1| GTP-binding protein [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296921853|emb|CBL56413.1| GTP-binding protein [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 316
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 85/156 (54%), Gaps = 11/156 (7%)
Query: 128 EEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADT 187
+++ ++ +S V +G PNAGKS++ N +VG+K+A S K TT H V GV+ +AD
Sbjct: 5 DQQPAGSQEFRSGFVCFVGRPNAGKSTLTNALVGSKIAITSSKPQTTRHAVRGVLHRADG 64
Query: 188 QICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLI 247
Q+ I DTPGL +S + + V S WS V+ V+ +VF H+ D I L
Sbjct: 65 QLIIIDTPGLSKPRSLLQQR-LNDLVRSTWSEVD---VVALVFPADEHIGPGD---IYLA 117
Query: 248 ERMGKQAPPKQKRVLCMNKVDLVTKK---KDLLKVA 280
++ + A P V + K DLV+ + K LL+VA
Sbjct: 118 TQLAELAKPP-TLVAIVTKTDLVSPERLAKHLLRVA 152
>gi|260881589|ref|ZP_05404771.2| GTP-binding protein Era [Mitsuokella multacida DSM 20544]
gi|260848446|gb|EEX68453.1| GTP-binding protein Era [Mitsuokella multacida DSM 20544]
Length = 323
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 86/156 (55%), Gaps = 10/156 (6%)
Query: 121 ALERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLG 180
A +R E+ E+ K+ KS + +IG PN GKS++IN ++G K+A +S K TT + +L
Sbjct: 13 ARKRSEDMEQNAKQAKHKSGFIAVIGRPNVGKSTLINTLIGQKIAIMSDKPQTTQNRILC 72
Query: 181 VMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPD 240
++T+ D QI DTPG+ K HK + V++A + + ++ V D + P
Sbjct: 73 ILTEPDAQIVFLDTPGIHKPK----HKLGEYMVKAAEGTLKEVDAILFVVDATEKM-GPG 127
Query: 241 SRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDL 276
I +ER+ + P +L +NK+DL+ K++ L
Sbjct: 128 EYYI--LERLQATSKP---VILVVNKLDLIEKEQVL 158
>gi|150010993|gb|ABR57154.1| GTP-binding protein Era [Staphylococcus xylosus]
Length = 299
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 15/181 (8%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS + IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFISIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTQEDAQIIFLDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D +RV A + ++ + +M + +V+ + D ++ +++ +
Sbjct: 63 G--IHKPKHKLGDYMMRV--ATNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKTI----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYLM 311
K L +NK+DLV +L+ E++K + I S L+G + L YL
Sbjct: 114 -KTPIFLVLNKIDLV-HPDELMPRIEKYKRYLDFTEIVPISALEGHNVDHFINVLKSYLP 171
Query: 312 E 312
E
Sbjct: 172 E 172
>gi|347753168|ref|YP_004860733.1| GTP-binding protein Era [Bacillus coagulans 36D1]
gi|347585686|gb|AEP01953.1| GTP-binding protein Era [Bacillus coagulans 36D1]
Length = 302
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 84/169 (49%), Gaps = 11/169 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS + IIG PN GKS+ IN +VG K+A +S K TT +++ GV T D Q+ DTPG+
Sbjct: 7 KSGFISIIGRPNVGKSTFINQVVGQKIAIMSDKPQTTRNKIQGVYTADDAQMIFIDTPGI 66
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K HK V+SA + ++++ + + D +I L++ + +
Sbjct: 67 HKPK----HKLGDFMVKSATDTLKEVDLILFMVNAEEKRGRGDEYIIELLKHV------R 116
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
L +NK+DLV DLL EQ+K L + + S L G + L
Sbjct: 117 TPVFLVINKIDLV-HPDDLLAFIEQYKDLYPFREVVPISALGGNNVSRL 164
>gi|315640637|ref|ZP_07895743.1| GTP-binding protein Era [Enterococcus italicus DSM 15952]
gi|315483665|gb|EFU74155.1| GTP-binding protein Era [Enterococcus italicus DSM 15952]
Length = 298
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 11/171 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V ++G PN GKS+++N +VG K+A +S K TT +++ GV T D QI DTP
Sbjct: 3 EHKSGFVALVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTKDAQIVFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ KS VESA+SA+N +V++ + + D + IER+ KQ+
Sbjct: 63 GIHKPKSRLG----DFMVESAFSALNEVDVILFMISADQKRGKGDDLI---IERLKKQSV 115
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
P L +NK+D V LL+V + + + S +G L
Sbjct: 116 P---VFLVVNKLDKVHPDA-LLEVIADYSQQMDFAEVVPISATEGNNFPTL 162
>gi|197334668|ref|YP_002156885.1| GTP-binding protein Era [Vibrio fischeri MJ11]
gi|197316158|gb|ACH65605.1| GTP-binding protein Era [Vibrio fischeri MJ11]
Length = 322
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Query: 127 EEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKAD 186
E + E ++Q + I+G PN GKS+++N ++G K++ SRK TT H ++GV T D
Sbjct: 16 EGKSEAVSDNQHCGFIAIVGRPNVGKSTLLNQILGQKISITSRKPQTTRHRIMGVDTDGD 75
Query: 187 TQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRL 246
Q DTPGL + + ++ + S+ S VNL VL +V H +PD ++
Sbjct: 76 YQAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNL--VLFLVDGTH---WTPDDEMV-- 128
Query: 247 IERMGKQAPPKQKRVLCMNKVDLVTKKKDLL 277
+ ++ K P VL +NKVD V KKD++
Sbjct: 129 LNKLKKSEFPT---VLLVNKVDNVKDKKDVM 156
>gi|99082398|ref|YP_614552.1| GTP-binding protein Era [Ruegeria sp. TM1040]
gi|99038678|gb|ABF65290.1| GTP-binding protein Era [Ruegeria sp. TM1040]
Length = 301
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 9/169 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ +IG PNAGKS+++N MVG KV+ V+ K TT + GV + D+Q+ DTPGL +
Sbjct: 8 IALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGDSQLVFVDTPGLFQPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW +V++++ + HR +T V R++E +G+ A + +
Sbjct: 68 RRLD----RAMVAAAWGGAADADVIVMLIEAHRGVTEG---VERILENLGEVAEGR-RVA 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V + LL + + + FM S KG G + L Q+L
Sbjct: 120 LAINKIDKV-QSDVLLGLTKDLNDRFPFAETFMISAEKGYGTEDLRQWL 167
>gi|403675440|ref|ZP_10937605.1| GTPase Era [Acinetobacter sp. NCTC 10304]
Length = 342
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ Q DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D + + D ++E++
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVIDAQKWTQNDD----LVLEKLKNADM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P +L +NK D K+++L + ++ L + I S L+GA L+ L++ +
Sbjct: 149 PV---ILVINKADTFGDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETI 200
>gi|417553511|ref|ZP_12204580.1| GTP-binding protein Era [Acinetobacter baumannii Naval-81]
gi|417560749|ref|ZP_12211628.1| GTP-binding protein Era [Acinetobacter baumannii OIFC137]
gi|421198380|ref|ZP_15655545.1| GTP-binding protein Era [Acinetobacter baumannii OIFC109]
gi|421454632|ref|ZP_15903979.1| GTP-binding protein Era [Acinetobacter baumannii IS-123]
gi|421631969|ref|ZP_16072632.1| GTP-binding protein Era [Acinetobacter baumannii Naval-13]
gi|421655505|ref|ZP_16095828.1| GTP-binding protein Era [Acinetobacter baumannii Naval-72]
gi|421666759|ref|ZP_16106847.1| GTP-binding protein Era [Acinetobacter baumannii OIFC087]
gi|421788880|ref|ZP_16225154.1| GTP-binding protein Era [Acinetobacter baumannii Naval-82]
gi|421806128|ref|ZP_16242001.1| GTP-binding protein Era [Acinetobacter baumannii WC-A-694]
gi|395523331|gb|EJG11420.1| GTP-binding protein Era [Acinetobacter baumannii OIFC137]
gi|395565276|gb|EJG26923.1| GTP-binding protein Era [Acinetobacter baumannii OIFC109]
gi|400212422|gb|EJO43381.1| GTP-binding protein Era [Acinetobacter baumannii IS-123]
gi|400389928|gb|EJP56975.1| GTP-binding protein Era [Acinetobacter baumannii Naval-81]
gi|408508830|gb|EKK10509.1| GTP-binding protein Era [Acinetobacter baumannii Naval-72]
gi|408710515|gb|EKL55741.1| GTP-binding protein Era [Acinetobacter baumannii Naval-13]
gi|410387461|gb|EKP39916.1| GTP-binding protein Era [Acinetobacter baumannii OIFC087]
gi|410400844|gb|EKP53010.1| GTP-binding protein Era [Acinetobacter baumannii Naval-82]
gi|410407602|gb|EKP59586.1| GTP-binding protein Era [Acinetobacter baumannii WC-A-694]
Length = 342
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ Q DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D + + D ++E++
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVIDAQKWTQNDD----LVLEKLKNADM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P +L +NK D K+++L + ++ L + I S L+GA L+ L++ +
Sbjct: 149 PV---ILVINKADTFGDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETI 200
>gi|381195726|ref|ZP_09903068.1| GTPase Era [Acinetobacter lwoffii WJ10621]
Length = 342
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 10/171 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D +S V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++A +Q DTP
Sbjct: 36 DFRSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSRAKSQAVFVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D + T D V +E++
Sbjct: 96 GMHKKEVRAINKMMNRAASSALRDVNL---VLFVLDADK-WTQNDELV---LEKLKNAEM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
P +L +NK+D++ K L + ++ L + I S L+GA L L
Sbjct: 149 PV---ILVINKIDILENKNHALPLIQERAKLMNFAEIVPVSALRGANLDHL 196
>gi|430760143|ref|YP_007216000.1| GTP-binding protein Era [Thioalkalivibrio nitratireducens DSM
14787]
gi|430009767|gb|AGA32519.1| GTP-binding protein Era [Thioalkalivibrio nitratireducens DSM
14787]
Length = 303
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 89/169 (52%), Gaps = 10/169 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++G PN GK++++N MVG K+AA++RK +TT H +LG++T+ Q+ + DTPG+ +
Sbjct: 14 VALVGRPNVGKTTLMNRMVGEKLAAITRKPHTTRHRILGIVTQGADQMVLMDTPGIDVEP 73
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ ++ +A A+ +V+ + + R + D V+RL++ G+ A +
Sbjct: 74 RKRMN---QLLTRTAVQALGEADVVCFIVEALR-FDAGDEHVLRLLQASGRPA------L 123
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NKVD V K LL + Y + SG G L+ L L
Sbjct: 124 LVVNKVDRVADKSALLPFIDVRALEYDYLGVVPLSGRTGQNLQGLVDEL 172
>gi|421587300|ref|ZP_16032720.1| GTPase Era [Rhizobium sp. Pop5]
gi|403708257|gb|EJZ23013.1| GTPase Era [Rhizobium sp. Pop5]
Length = 313
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N +VG KV+ VS K TT V G+ + QI DTPG+ +
Sbjct: 24 VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAIVRGIAIHDNAQIVFMDTPGIFKPR 83
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW +++M++ D R L ++ ++ + +Q ++
Sbjct: 84 RRLD----RAMVTSAWGGAKDADLIMLLIDSERGLRGDAEAILEGLKEV------QQPKI 133
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V ++DLL +A ++R FM S G+G + YL
Sbjct: 134 LVLNKIDRVN-REDLLALAAAANEKIAFDRTFMISAENGSGCDDVMDYL 181
>gi|417544008|ref|ZP_12195094.1| GTP-binding protein Era [Acinetobacter baumannii OIFC032]
gi|421670646|ref|ZP_16110634.1| GTP-binding protein Era [Acinetobacter baumannii OIFC099]
gi|400381896|gb|EJP40574.1| GTP-binding protein Era [Acinetobacter baumannii OIFC032]
gi|410384184|gb|EKP36702.1| GTP-binding protein Era [Acinetobacter baumannii OIFC099]
Length = 342
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ Q DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D + + D ++E++
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVIDAQKWTQNDD----LVLEKLKNADM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P +L +NK D K+++L + ++ L + I S L+GA L+ L++ +
Sbjct: 149 PV---ILVINKADTFGDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETI 200
>gi|417949395|ref|ZP_12592531.1| GTPase Era [Vibrio splendidus ATCC 33789]
gi|342808353|gb|EGU43513.1| GTPase Era [Vibrio splendidus ATCC 33789]
Length = 323
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 12/181 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+Q + I+G PN GKS+++N+++G K++ SRK TT H ++GV T+ D Q DT
Sbjct: 25 ENQHCGFIAIVGRPNVGKSTLLNHILGQKISITSRKPQTTRHRIMGVETEGDYQAIFVDT 84
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQ 253
PGL + + ++ + S+ S VNL V F V H T D V + ++ K
Sbjct: 85 PGLHIEEKRAINRLMNRAANSSLSDVNL-----VFFLVDGTHWTEDDEMV---LNKLKKT 136
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
P VLC+NKVD V + ++++ + + + S +G + L +++ E
Sbjct: 137 NFPV---VLCINKVDNVQDRTNVMQHMMEVSKKMDFIDVVPISAKQGKNIDVLRKHVREH 193
Query: 314 F 314
Sbjct: 194 L 194
>gi|393201605|ref|YP_006463447.1| GTPase [Solibacillus silvestris StLB046]
gi|406664463|ref|ZP_11072238.1| Bex protein [Bacillus isronensis B3W22]
gi|327440936|dbj|BAK17301.1| GTPase [Solibacillus silvestris StLB046]
gi|405387311|gb|EKB46735.1| Bex protein [Bacillus isronensis B3W22]
Length = 304
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 94/169 (55%), Gaps = 11/169 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+ +N ++G K+A +S K TT ++V GV+T+ ++Q DTPG+
Sbjct: 8 KSGFVSIVGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTQQNSQTIFIDTPGI 67
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K HK + ++++ +A+ +V+M + + + + D +I L++ G + P
Sbjct: 68 HKPK----HKLGEFMLKTSRNALREVDVIMFMVNAEQAIGKGDEFIIELLQ--GNKTPV- 120
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
L +NK+DLV +L+K+ + +K + I S L+G ++ L
Sbjct: 121 ---FLIINKIDLV-HPDELVKIIDSYKDKFDFAEIIPISALQGNNVENL 165
>gi|242242840|ref|ZP_04797285.1| GTP-binding protein Era, partial [Staphylococcus epidermidis
W23144]
gi|242233703|gb|EES36015.1| GTP-binding protein Era [Staphylococcus epidermidis W23144]
Length = 208
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D +RV A + ++ + +M + +V+ + D ++ +++ +
Sbjct: 63 G--IHKPKHKLGDYMMRV--AKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV + K+ EQ++ + I S L+G + L
Sbjct: 114 -KTPIFLVLNKIDLVHPDTLMPKI-EQYQSYMDFTDIIPISALEGMNVDHFIDVL 166
>gi|379711898|ref|YP_005300237.1| GTPase Era [Rickettsia philipii str. 364D]
gi|376328543|gb|AFB25780.1| GTPase Era [Rickettsia philipii str. 364D]
Length = 339
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 100/184 (54%), Gaps = 14/184 (7%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
K +QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++
Sbjct: 46 KMSNQKTVSVCIIGQPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILY 105
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM-G 251
DTPG+ K K V AWS+++ ++++++ D L S D +++++
Sbjct: 106 DTPGIFEPKGSLE----KAMVRCAWSSLHSADLVLLIID---SLKSFDDITHNILDKLRS 158
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
P + +NK+D+ +K + +K A ++ P + S L G + L +Y+
Sbjct: 159 LNIIP----IFLLNKIDIESKYLNDIK-AFLTENYPD-SLLLPISALSGKNIDGLLEYIT 212
Query: 312 EQFK 315
+ K
Sbjct: 213 SKAK 216
>gi|154498351|ref|ZP_02036729.1| hypothetical protein BACCAP_02340 [Bacteroides capillosus ATCC
29799]
gi|150272662|gb|EDM99840.1| ribosome biogenesis GTPase Era [Pseudoflavonifractor capillosus
ATCC 29799]
Length = 297
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 90/178 (50%), Gaps = 11/178 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E +KS + I+G PN GKS++ N +VG K+A V+ K TT + + V+ + + Q DT
Sbjct: 2 EIKKSGMIAIVGRPNVGKSTLTNALVGEKIAIVTNKPQTTRNRICAVLNRGECQFVFMDT 61
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PGL ++ VKV +S + +M++ + H+ P+ +I I+ +G +
Sbjct: 62 PGLHRARTRLGDYMVKVVRDSVADV----DAVMLLVEPIPHVGGPEEELIERIKALGVPS 117
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
VL +NK+D V KK +LL V + + ++ I S GL+ L + L E
Sbjct: 118 ------VLVINKIDTV-KKDELLAVMQAYGEKHSFDAILPISAKNSEGLEDLLKVLGE 168
>gi|229521287|ref|ZP_04410707.1| GTP-binding protein Era [Vibrio cholerae TM 11079-80]
gi|419838152|ref|ZP_14361590.1| GTP-binding protein Era [Vibrio cholerae HC-46B1]
gi|421344170|ref|ZP_15794573.1| GTP-binding protein Era [Vibrio cholerae HC-43B1]
gi|421355146|ref|ZP_15805478.1| GTP-binding protein Era [Vibrio cholerae HE-45]
gi|423736113|ref|ZP_17709303.1| GTP-binding protein Era [Vibrio cholerae HC-41B1]
gi|424010446|ref|ZP_17753379.1| GTP-binding protein Era [Vibrio cholerae HC-44C1]
gi|424660957|ref|ZP_18098204.1| GTP-binding protein Era [Vibrio cholerae HE-16]
gi|229341819|gb|EEO06821.1| GTP-binding protein Era [Vibrio cholerae TM 11079-80]
gi|395940250|gb|EJH50931.1| GTP-binding protein Era [Vibrio cholerae HC-43B1]
gi|395954271|gb|EJH64884.1| GTP-binding protein Era [Vibrio cholerae HE-45]
gi|408049829|gb|EKG85018.1| GTP-binding protein Era [Vibrio cholerae HE-16]
gi|408629085|gb|EKL01798.1| GTP-binding protein Era [Vibrio cholerae HC-41B1]
gi|408856700|gb|EKL96395.1| GTP-binding protein Era [Vibrio cholerae HC-46B1]
gi|408863075|gb|EKM02571.1| GTP-binding protein Era [Vibrio cholerae HC-44C1]
Length = 324
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 94/192 (48%), Gaps = 12/192 (6%)
Query: 124 RQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMT 183
R E + E+Q V I+G PN GKS+++N ++G K++ SRK TT H ++GV T
Sbjct: 15 RSEGQTATSTPEEQHCGFVAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVET 74
Query: 184 KADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRV 243
+ Q DTPGL + + ++ + S+ S VNL VL VV H T+ D V
Sbjct: 75 EGKYQAIYVDTPGLHIEEKRAINRLMNRAASSSLSDVNL--VLFVVEGT--HWTADDEMV 130
Query: 244 IRLIERMGKQAPPKQKRVLCMNKVDLVTKKKD-LLKVAEQFKHLPGYERIFMTSGLKGAG 302
+++ VLC+NKVD V + + +L + E K +P + I S +G
Sbjct: 131 FNKLQKANFPV------VLCVNKVDQVKDRNEVMLHMLELSKRMP-FVDIVPISAKQGKN 183
Query: 303 LKALTQYLMEQF 314
L +++ E
Sbjct: 184 TDVLKKHVREHL 195
>gi|148981906|ref|ZP_01816564.1| GTP-binding protein Era [Vibrionales bacterium SWAT-3]
gi|145960707|gb|EDK26049.1| GTP-binding protein Era [Vibrionales bacterium SWAT-3]
Length = 323
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 12/181 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+Q + I+G PN GKS+++N+++G K++ SRK TT H ++GV T+ D Q DT
Sbjct: 25 ENQHCGFIAIVGRPNVGKSTLLNHILGQKISITSRKPQTTRHRIMGVETEGDYQAIFVDT 84
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQ 253
PGL + + ++ + S+ S VNL V F V H T D V + ++ K
Sbjct: 85 PGLHIEEKRAINRLMNRAANSSLSDVNL-----VFFLVDGTHWTEDDEMV---LNKLKKT 136
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
P VLC+NKVD V + ++++ + + + S +G + L +++ E
Sbjct: 137 DFPV---VLCINKVDNVQDRTNVMQHMMEVSKKMDFIDVVPISAKQGKNIDVLRKHVREH 193
Query: 314 F 314
Sbjct: 194 L 194
>gi|184159115|ref|YP_001847454.1| GTP-binding protein Era [Acinetobacter baumannii ACICU]
gi|384144224|ref|YP_005526934.1| GTPase [Acinetobacter baumannii MDR-ZJ06]
gi|387122955|ref|YP_006288837.1| GTP-binding protein Era [Acinetobacter baumannii MDR-TJ]
gi|407933704|ref|YP_006849347.1| GTP-binding protein Era [Acinetobacter baumannii TYTH-1]
gi|417569854|ref|ZP_12220712.1| GTP-binding protein Era [Acinetobacter baumannii OIFC189]
gi|417575838|ref|ZP_12226686.1| GTP-binding protein Era [Acinetobacter baumannii Naval-17]
gi|417870355|ref|ZP_12515321.1| GTPase Era [Acinetobacter baumannii ABNIH1]
gi|417874395|ref|ZP_12519248.1| GTPase Era [Acinetobacter baumannii ABNIH2]
gi|417877598|ref|ZP_12522289.1| GTPase Era [Acinetobacter baumannii ABNIH3]
gi|417881774|ref|ZP_12526084.1| GTPase Era [Acinetobacter baumannii ABNIH4]
gi|421203556|ref|ZP_15660693.1| GTP-binding protein Era [Acinetobacter baumannii AC12]
gi|421533520|ref|ZP_15979803.1| GTP-binding protein Era [Acinetobacter baumannii AC30]
gi|421628248|ref|ZP_16069033.1| GTP-binding protein Era [Acinetobacter baumannii OIFC180]
gi|421689623|ref|ZP_16129303.1| GTP-binding protein Era [Acinetobacter baumannii IS-143]
gi|421704386|ref|ZP_16143831.1| GTPase Era [Acinetobacter baumannii ZWS1122]
gi|421708164|ref|ZP_16147543.1| GTPase Era [Acinetobacter baumannii ZWS1219]
gi|421791296|ref|ZP_16227473.1| GTP-binding protein Era [Acinetobacter baumannii Naval-2]
gi|424051452|ref|ZP_17788984.1| GTP-binding protein Era [Acinetobacter baumannii Ab11111]
gi|424062491|ref|ZP_17799977.1| GTP-binding protein Era [Acinetobacter baumannii Ab44444]
gi|425754385|ref|ZP_18872247.1| GTP-binding protein Era [Acinetobacter baumannii Naval-113]
gi|445472388|ref|ZP_21452467.1| GTP-binding protein Era [Acinetobacter baumannii OIFC338]
gi|445477162|ref|ZP_21454137.1| GTP-binding protein Era [Acinetobacter baumannii Naval-78]
gi|183210709|gb|ACC58107.1| GTPase [Acinetobacter baumannii ACICU]
gi|342228042|gb|EGT92947.1| GTPase Era [Acinetobacter baumannii ABNIH1]
gi|342229117|gb|EGT93987.1| GTPase Era [Acinetobacter baumannii ABNIH2]
gi|342235315|gb|EGT99922.1| GTPase Era [Acinetobacter baumannii ABNIH3]
gi|342238529|gb|EGU02960.1| GTPase Era [Acinetobacter baumannii ABNIH4]
gi|347594717|gb|AEP07438.1| GTPase [Acinetobacter baumannii MDR-ZJ06]
gi|385877447|gb|AFI94542.1| GTP-binding protein Era [Acinetobacter baumannii MDR-TJ]
gi|395554077|gb|EJG20083.1| GTP-binding protein Era [Acinetobacter baumannii OIFC189]
gi|395571327|gb|EJG31986.1| GTP-binding protein Era [Acinetobacter baumannii Naval-17]
gi|398326930|gb|EJN43071.1| GTP-binding protein Era [Acinetobacter baumannii AC12]
gi|404557789|gb|EKA63084.1| GTP-binding protein Era [Acinetobacter baumannii IS-143]
gi|404665008|gb|EKB32971.1| GTP-binding protein Era [Acinetobacter baumannii Ab11111]
gi|404671443|gb|EKB39286.1| GTP-binding protein Era [Acinetobacter baumannii Ab44444]
gi|407190220|gb|EKE61439.1| GTPase Era [Acinetobacter baumannii ZWS1122]
gi|407190777|gb|EKE61992.1| GTPase Era [Acinetobacter baumannii ZWS1219]
gi|407902285|gb|AFU39116.1| GTP-binding protein Era [Acinetobacter baumannii TYTH-1]
gi|408708287|gb|EKL53564.1| GTP-binding protein Era [Acinetobacter baumannii OIFC180]
gi|409988520|gb|EKO44690.1| GTP-binding protein Era [Acinetobacter baumannii AC30]
gi|410403333|gb|EKP55430.1| GTP-binding protein Era [Acinetobacter baumannii Naval-2]
gi|425496881|gb|EKU62995.1| GTP-binding protein Era [Acinetobacter baumannii Naval-113]
gi|444770053|gb|ELW94211.1| GTP-binding protein Era [Acinetobacter baumannii OIFC338]
gi|444776669|gb|ELX00707.1| GTP-binding protein Era [Acinetobacter baumannii Naval-78]
Length = 342
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ Q DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D + + D ++E++
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVIDAQKWTQNDD----LVLEKLKNADM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P +L +NK D K+++L + ++ L + I S L+GA L+ L++ +
Sbjct: 149 PV---ILVINKADTFGDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETI 200
>gi|390631171|ref|ZP_10259136.1| GTPase Era [Weissella confusa LBAE C39-2]
gi|390483599|emb|CCF31484.1| GTPase Era [Weissella confusa LBAE C39-2]
Length = 302
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 11/185 (5%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
+ E+ KS V ++G PN GKS+++N M+G K+A +S K TT +++ G+ T + QI
Sbjct: 1 MSEQGFKSGFVALVGRPNVGKSTLLNKMIGEKIAIMSPKAQTTRNKIQGIYTTDEGQIVF 60
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMG 251
DTPG ++K S D V+ +A SA+ +++ + + + D +I R+
Sbjct: 61 MDTPG--IHKPHNSLGDFMVK--TAMSALREADMVWFLVNADEPRGAGDDFIIN---RLK 113
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
P L +NK+DLV DLL + + + IF S LKG G+ L + M
Sbjct: 114 DTNTPV---YLIINKIDLVN-PSDLLAIIADYSQQMEFAEIFPISALKGDGVPELLDFAM 169
Query: 312 EQFKD 316
++ ++
Sbjct: 170 DKMEE 174
>gi|317132159|ref|YP_004091473.1| GTP-binding protein Era [Ethanoligenens harbinense YUAN-3]
gi|315470138|gb|ADU26742.1| GTP-binding protein Era [Ethanoligenens harbinense YUAN-3]
Length = 296
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 85/175 (48%), Gaps = 11/175 (6%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
Q S V IIG PN GKS+++N ++G K+A VS K TT +++ GV TK DTQ+ DTP
Sbjct: 4 QHSGFVAIIGRPNVGKSTLLNAILGEKIAIVSPKPQTTRNKITGVYTKDDTQLIFLDTP- 62
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
G+ K+ A S N + V V +P L+ ++GKQ P
Sbjct: 63 ------GWHQPKTKLGNYMAKSVDNTLTDVDAVLFVIEPREAPRPAETELLGKLGKQVP- 115
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
+L +NK+D++ K L+ V + L + + S K G+ AL L+
Sbjct: 116 ---VLLVINKIDILADKSALMGVIAHWSKLRDFTAVVPISAEKNDGVDALLAELI 167
>gi|157825293|ref|YP_001493013.1| GTP-binding protein Era [Rickettsia akari str. Hartford]
gi|189037662|sp|A8GM80.1|ERA_RICAH RecName: Full=GTPase Era
gi|157799251|gb|ABV74505.1| GTP-binding protein Era [Rickettsia akari str. Hartford]
Length = 293
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 12/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+Q++++V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++DTP
Sbjct: 3 NQRTISVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILYDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K K V AWS+++ +++M++ D + ++ + +
Sbjct: 63 GIFEPKGSLE----KAMVRCAWSSLHSADLVMLIIDSLKPFDDVTHDILDKLRSLNIVP- 117
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ +NK+D+ +K D +K H P F S L G + L +Y+
Sbjct: 118 -----IFLLNKIDIESKYLDDIKAFLIGNH-PD-SLFFPISALSGKNINGLLEYI 165
>gi|421860389|ref|ZP_16292520.1| GTPase [Paenibacillus popilliae ATCC 14706]
gi|410830137|dbj|GAC42957.1| GTPase [Paenibacillus popilliae ATCC 14706]
Length = 309
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 88/173 (50%), Gaps = 11/173 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V I+G PN GKS+++N+++G K+A +S K TT +++ GV T DTQI DTPG+
Sbjct: 16 QSGFVAIVGRPNVGKSTLMNHVIGQKIAIMSDKPQTTRNKIHGVYTTEDTQIVFLDTPGI 75
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
KS +V A++ +N EV++ + DV L S D V +E + K P
Sbjct: 76 HKRKSKLGDYMNQV----AYNTLNEVEVILFLVDVSAGLGSGDKFV---MEHLAKVKTPV 128
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+L MNK+D V +L + + + I S L G + L + L
Sbjct: 129 ---ILVMNKIDQVN-PDELPPMIHSYNERFEFAEIVPISALHGNNVNRLLEVL 177
>gi|165932728|ref|YP_001649517.1| GTPase Era [Rickettsia rickettsii str. Iowa]
gi|378720830|ref|YP_005285717.1| GTPase Era [Rickettsia rickettsii str. Colombia]
gi|378722184|ref|YP_005287070.1| GTPase Era [Rickettsia rickettsii str. Arizona]
gi|378723542|ref|YP_005288426.1| GTPase Era [Rickettsia rickettsii str. Hauke]
gi|379017330|ref|YP_005293564.1| GTPase Era [Rickettsia rickettsii str. Hino]
gi|165907815|gb|ABY72111.1| GTP-binding protein [Rickettsia rickettsii str. Iowa]
gi|376325854|gb|AFB23093.1| GTPase Era [Rickettsia rickettsii str. Colombia]
gi|376327208|gb|AFB24446.1| GTPase Era [Rickettsia rickettsii str. Arizona]
gi|376329895|gb|AFB27131.1| GTPase Era [Rickettsia rickettsii str. Hino]
gi|376332557|gb|AFB29790.1| GTPase Era [Rickettsia rickettsii str. Hauke]
Length = 339
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 100/184 (54%), Gaps = 14/184 (7%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
K +QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++
Sbjct: 46 KMSNQKTVSVCIIGQPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILY 105
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM-G 251
DTPG+ K K V AWS+++ ++++++ D L S D +++++
Sbjct: 106 DTPGIFEPKGSLE----KAMVRCAWSSLHSADLVLLIID---SLKSFDDITHNILDKLRS 158
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
P + +NK+D+ +K + +K A ++ P + S L G + L +Y+
Sbjct: 159 LNIIP----IFLLNKIDIESKYLNDIK-AFLTENYPD-SLLLPISALSGKNIDGLLEYIT 212
Query: 312 EQFK 315
+ K
Sbjct: 213 SKAK 216
>gi|403053131|ref|ZP_10907615.1| GTPase Era [Acinetobacter bereziniae LMG 1003]
gi|445413123|ref|ZP_21433467.1| GTP-binding protein Era [Acinetobacter sp. WC-743]
gi|444765917|gb|ELW90194.1| GTP-binding protein Era [Acinetobacter sp. WC-743]
Length = 342
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 94/179 (52%), Gaps = 14/179 (7%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D +S V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ +Q DTP
Sbjct: 36 DYRSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKSQAVFVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D + T D V +E++
Sbjct: 96 GMHKKEVRAINKMMNKAAHSALRDVNL---VLFVLDAQK-WTQNDELV---LEKLKNAEM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGL----KALTQYL 310
P VL +NK+D + K+ +L + ++ L + I S L+GA L A+ +YL
Sbjct: 149 PV---VLIINKIDTLENKRMVLPLIQERAKLMNFAEIVPVSALRGANLDHLRDAIEKYL 204
>gi|424894360|ref|ZP_18317934.1| GTP-binding protein Era [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393178587|gb|EJC78626.1| GTP-binding protein Era [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 313
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N +VG KV+ VS K TT V G+ + QI DTPG+ +
Sbjct: 24 VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAIVRGIAIHDNAQIVFMDTPGIFKPR 83
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW ++++++ D R L ++ ++ + +Q ++
Sbjct: 84 RRLD----RAMVTSAWGGARDADLIVLLIDSERGLRGDAEAILEGLKEV------RQPKI 133
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V ++DLL +A +ER FM S G+G + YL
Sbjct: 134 LLLNKIDRVN-REDLLALAAAANEKIAFERTFMISAENGSGCDDVMDYL 181
>gi|227874499|ref|ZP_03992671.1| GTP-binding protein Era [Oribacterium sinus F0268]
gi|227839643|gb|EEJ50101.1| GTP-binding protein Era [Oribacterium sinus F0268]
Length = 319
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 12/190 (6%)
Query: 124 RQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMT 183
++ EE +V+E KS V I+G PNAGKS+++N ++G KVA S+K TT ++++ V
Sbjct: 11 KERGEEVKVEEGPVKSGFVSIVGLPNAGKSTLLNALIGQKVAITSKKPQTTRNQIMAVYD 70
Query: 184 KADTQICIFDTPGLMLNKSGYSHKDVKVRVES-AWSAVNLFEVLMVVFDVHRHLTSPDSR 242
+ QI DTPG+ K+ S V +ES A A+ ++++ + D + +
Sbjct: 71 EERGQIVFHDTPGIHKAKNQLS-----VYMESVAEKALGNGDLVLYIVDATEQKGEKEEQ 125
Query: 243 VIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG 302
++ L++ K+K +L +NK+DL+ + LK E ++ + I S K G
Sbjct: 126 ILSLLKH------SKRKIILVLNKLDLLGGEDAFLKKKEDYEKELDFAAIVGISAYKSQG 179
Query: 303 LKALTQYLME 312
L+ L L +
Sbjct: 180 LEELKDILFD 189
>gi|84390105|ref|ZP_00991367.1| GTP-binding protein Era [Vibrio splendidus 12B01]
gi|86146358|ref|ZP_01064682.1| GTP-binding protein Era [Vibrio sp. MED222]
gi|218710568|ref|YP_002418189.1| GTP-binding protein Era [Vibrio splendidus LGP32]
gi|84376759|gb|EAP93634.1| GTP-binding protein Era [Vibrio splendidus 12B01]
gi|85835837|gb|EAQ53971.1| GTP-binding protein Era [Vibrio sp. MED222]
gi|218323587|emb|CAV19827.1| GTP-binding protein era homolog [Vibrio splendidus LGP32]
Length = 323
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 79/145 (54%), Gaps = 12/145 (8%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+Q + I+G PN GKS+++N+++G K++ SRK TT H ++GV T+ D Q DT
Sbjct: 25 ENQHCGFIAIVGRPNVGKSTLLNHILGQKISITSRKPQTTRHRIMGVETEGDYQAIYVDT 84
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQ 253
PGL + + ++ + S+ S VNL V F V H T D V + ++ K
Sbjct: 85 PGLHIEEKRAINRLMNRAANSSLSDVNL-----VFFLVDGTHWTDDDEMV---LNKLRKT 136
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLK 278
P VLC+NKVD V + D+++
Sbjct: 137 DFPV---VLCINKVDNVQDRTDVMQ 158
>gi|332875944|ref|ZP_08443730.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6014059]
gi|385238510|ref|YP_005799849.1| GTP-binding protein Era [Acinetobacter baumannii TCDC-AB0715]
gi|416145058|ref|ZP_11600175.1| GTP-binding protein Era [Acinetobacter baumannii AB210]
gi|323519011|gb|ADX93392.1| GTP-binding protein Era [Acinetobacter baumannii TCDC-AB0715]
gi|332735810|gb|EGJ66851.1| ribosome biogenesis GTPase Era [Acinetobacter baumannii 6014059]
gi|333367174|gb|EGK49188.1| GTP-binding protein Era [Acinetobacter baumannii AB210]
Length = 340
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ Q DTP
Sbjct: 34 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTP 93
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D + + D ++E++
Sbjct: 94 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVIDAQKWTQNDD----LVLEKLKNADM 146
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P +L +NK D K+++L + ++ L + I S L+GA L+ L++ +
Sbjct: 147 PV---ILVINKADTFGDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETI 198
>gi|126726094|ref|ZP_01741936.1| GTP-binding protein Era [Rhodobacterales bacterium HTCC2150]
gi|126705298|gb|EBA04389.1| GTP-binding protein Era [Rhodobacterales bacterium HTCC2150]
Length = 302
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 95/175 (54%), Gaps = 9/175 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D ++ V +IG PNAGKS+++N MVG KV+ V+ K TT + G+ + D+QI DTP
Sbjct: 3 DTRAGFVALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGISIEGDSQIVFVDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
GL + + V +AWS ++++++ + HR +T V ++ +G++A
Sbjct: 63 GLFRPRRRLD----RAMVAAAWSGAADADLVVLLVEAHRGITEG---VEAILAGLGERAD 115
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ + L +NK+D V K LL + E+ +E+ F+ S +G G+ L +L
Sbjct: 116 GR-RVALAINKIDKVQASK-LLALTEKLNETFPFEQTFLISAERGHGVDDLRVWL 168
>gi|379018661|ref|YP_005294895.1| GTPase Era [Rickettsia rickettsii str. Hlp#2]
gi|376331241|gb|AFB28475.1| GTPase Era [Rickettsia rickettsii str. Hlp#2]
Length = 339
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 100/184 (54%), Gaps = 14/184 (7%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
K +QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++
Sbjct: 46 KMSNQKTVSVCIIGQPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILY 105
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM-G 251
DTPG+ K K V AWS+++ ++++++ D L S D +++++
Sbjct: 106 DTPGIFEPKGSLE----KAMVRCAWSSLHSADLVLLIID---SLKSFDDITHNILDKLRS 158
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
P + +NK+D+ +K + +K A ++ P + S L G + L +Y+
Sbjct: 159 LNIIP----IFLLNKIDIESKYLNDIK-AFLTENYPD-SLLLPISALSGKNIDGLLEYIT 212
Query: 312 EQFK 315
+ K
Sbjct: 213 SKAK 216
>gi|379022514|ref|YP_005299175.1| GTP-binding protein Era [Rickettsia canadensis str. CA410]
gi|376323452|gb|AFB20693.1| GTP-binding protein Era [Rickettsia canadensis str. CA410]
Length = 295
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 92/179 (51%), Gaps = 12/179 (6%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++DTPG
Sbjct: 6 QKTVSVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILYDTPG 65
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ K K V AWS+++ +++M++ D + + + K
Sbjct: 66 IFEPKGTLE----KAMVRCAWSSLHSADLVMLIIDSLKPFDDVTHNI------LDKLCSL 115
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFK 315
V +NK+++ +K + LK H P +F S L G + L +Y+ + K
Sbjct: 116 NIVPVFLLNKIEIESKYLNNLKAFLMENH-PN-SLLFPISALSGKNIDRLLEYITSKAK 172
>gi|425737403|ref|ZP_18855676.1| GTPase Era [Staphylococcus massiliensis S46]
gi|425482751|gb|EKU49907.1| GTPase Era [Staphylococcus massiliensis S46]
Length = 298
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 15/181 (8%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+AD+QI DTP
Sbjct: 2 EHKSGFVSIIGRPNVGKSTFMNRVIGHKIAIMSDKAQTTRNKIQGVMTEADSQIIFLDTP 61
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D ++V A + + + +M + +V + D ++ +++ +
Sbjct: 62 G--IHKPKHKLGDYMMKV--AKNTLGEIDAIMFMVNVDEEIGRGDQYIMDMLKNV----- 112
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYLM 311
K L +NK+DLV + L+ EQ++ + + S L+G + L YL
Sbjct: 113 -KTPVFLVLNKIDLVHPDQ-LMPRIEQYQEYMDFTEVIPISALEGLNVDHFISVLKSYLP 170
Query: 312 E 312
E
Sbjct: 171 E 171
>gi|295677175|ref|YP_003605699.1| GTP-binding protein Era [Burkholderia sp. CCGE1002]
gi|295437018|gb|ADG16188.1| GTP-binding protein Era [Burkholderia sp. CCGE1002]
Length = 287
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N +VG KV+ SRK TT H + G+ T D Q DTPG
Sbjct: 2 VAIVGRPNVGKSTLMNALVGQKVSITSRKAQTTRHRITGINTLEDAQYIFVDTPGFQTRH 61
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
SG ++ + V S ++V + ++ V + R D +V+ LI P K +
Sbjct: 62 SGALNRSLNRAVTSTLTSV---DAILFVIEAGR-FGPDDQKVLDLI-------PAKVPTL 110
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERI 292
L NK+D V+ K L +Q L + I
Sbjct: 111 LIANKLDRVSDKDSLFPFMQQMSTLREFNEI 141
>gi|158521130|ref|YP_001529000.1| GTP-binding protein Era [Desulfococcus oleovorans Hxd3]
gi|158509956|gb|ABW66923.1| GTP-binding protein Era [Desulfococcus oleovorans Hxd3]
Length = 303
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 91/172 (52%), Gaps = 23/172 (13%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
++D +S + I G PNAGKS+++N + G K++ S K TT + +LGV+ + + Q+ D
Sbjct: 8 KKDFRSGFIAICGPPNAGKSTLLNLLAGEKISITSDKPQTTRNRILGVVNRKNAQVVFVD 67
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHR------HLTSPDSRVIRLI 247
TPG+ K + V +A SA+ +V+++V DV + HLT I
Sbjct: 68 TPGIFRPKGKLN----TAIVGTAVSALADVDVILLVIDVVKPRKDAEHLT---------I 114
Query: 248 ERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLK 299
E + P VL +NK+D + KK LL++ + ++ L +ERI S L+
Sbjct: 115 EHLKHHNKPV---VLALNKIDRI-KKHKLLEMIDSWQRLYAFERIVPISALE 162
>gi|78065719|ref|YP_368488.1| GTP-binding protein Era [Burkholderia sp. 383]
gi|77966464|gb|ABB07844.1| GTP-binding protein Era [Burkholderia sp. 383]
Length = 299
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++N +VG K++ SRK TT H + G+ T D Q DTPG
Sbjct: 14 IAIVGRPNVGKSTLMNALVGQKISITSRKAQTTRHRITGINTFDDAQFVFVDTPGFQTRH 73
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S ++ + V S ++V+ V++ V + R D +V+ LI PP +
Sbjct: 74 STALNRSLNRAVTSTLTSVD---VILFVIEAGR-FGPDDQKVLDLI-------PPGMPTL 122
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHL 286
L NK+D V K L +Q L
Sbjct: 123 LIANKIDRVNDKASLFPFMQQMSTL 147
>gi|357030877|ref|ZP_09092821.1| GTP-binding protein Era [Gluconobacter morbifer G707]
gi|356415571|gb|EHH69214.1| GTP-binding protein Era [Gluconobacter morbifer G707]
Length = 301
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 11/173 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++GAPNAGKS+++N + G K++ VS K TT LG++ QI + D PG+ +
Sbjct: 14 VALVGAPNAGKSTLLNRLAGAKLSIVSPKAQTTRFRTLGIVMHEGAQIILVDLPGIFKPR 73
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW+ ++ +++ D L D R E +G+ A ++
Sbjct: 74 RRLD----RAMVNAAWTGSQDADLTLLLVDAKAGLRD-DVR-----EIIGRLAGSGKRVW 123
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK DLV + +LL + + L E +FM S G G+K L L +
Sbjct: 124 LVLNKTDLV-DRAELLPLTREISDLIPVEHVFMLSARSGDGVKDLMDRLAAEL 175
>gi|440226027|ref|YP_007333118.1| GTP-binding protein Era [Rhizobium tropici CIAT 899]
gi|440037538|gb|AGB70572.1| GTP-binding protein Era [Rhizobium tropici CIAT 899]
Length = 314
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N +VG KV+ VS K TT V G+ + QI DTPG+ +
Sbjct: 25 VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAIVRGIAIHNNAQIVFMDTPGIFKPR 84
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW +++M++ D R L D+ I +E + + PK +
Sbjct: 85 RRLD----RAMVTSAWGGAKDADLIMLLIDSERGLRG-DAEAI--LEGLKDVSQPK---I 134
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V +++DLL +A +E+ FM S G+G + YL
Sbjct: 135 LVLNKIDRV-RREDLLALAAAANEKIAFEQTFMISAENGSGCDDVMDYL 182
>gi|402704037|ref|ZP_10852016.1| GTPase Era [Rickettsia helvetica C9P9]
Length = 293
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 95/180 (52%), Gaps = 12/180 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+QK+++V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++DTP
Sbjct: 3 NQKTISVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILYDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K K V AWS+++ ++++++ D + ++ + + P
Sbjct: 63 GIFEPKGTLE----KAMVRCAWSSLHSADLVLLIIDSLKPFDDVTHNILDKLRSLN-IVP 117
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFK 315
V +NK+D+ +K + +K H P +F S L G + L +Y+ + K
Sbjct: 118 -----VFLLNKIDIESKYLNDIKAFLTENH-PD-SLLFPISALSGKNIDGLLEYITSKAK 170
>gi|258544602|ref|ZP_05704836.1| GTP-binding protein Era [Cardiobacterium hominis ATCC 15826]
gi|258520144|gb|EEV89003.1| GTP-binding protein Era [Cardiobacterium hominis ATCC 15826]
Length = 300
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 14/176 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ ++G PN GKS++IN+++G K+A S+K TT H +LG+ T + QI DTPG+ ++
Sbjct: 8 IAVVGRPNVGKSTLINHLIGQKIAITSKKPQTTRHALLGIHTTGENQIIFVDTPGIHQSR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
++ + +AW +++ ++++ V + R D+R+ + + A + +
Sbjct: 68 EKAINRHMN---RTAWQSMDYVDLILQVSEAGR-WNDEDARIAKAL------AAGDKPVI 117
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGL----KALTQYLMEQ 313
NK+D + K LLK E + L ++ I S + L +AL +L EQ
Sbjct: 118 QVPNKIDRLRDKTVLLKELEHIQSLGNWQAIIPVSAQQRQNLDTLERALIPFLPEQ 173
>gi|338813214|ref|ZP_08625348.1| GTP-binding protein Era [Acetonema longum DSM 6540]
gi|337274821|gb|EGO63324.1| GTP-binding protein Era [Acetonema longum DSM 6540]
Length = 302
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 90/170 (52%), Gaps = 11/170 (6%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
+S V ++G PN GKS+++N ++G K+A +S K TT +++L V+T+ D QI DTPG
Sbjct: 11 HQSGFVAVVGRPNVGKSTLVNSLIGQKIAIMSDKPQTTRNKILCVLTQPDAQILFIDTPG 70
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ K HK + V ++ S + +V++ V D + + + + + +ER+ P
Sbjct: 71 IHKPK----HKLGEYMVRASESTLREVDVILFVVDATQKMGAGEQYI---LERIAAVNTP 123
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
+L +NK+DLV+ + DLL V E + + + S L L L
Sbjct: 124 V---ILAINKIDLVS-RTDLLPVIETYNTAHSFNAVVPISALNRDNLPGL 169
>gi|209517221|ref|ZP_03266066.1| GTP-binding protein Era [Burkholderia sp. H160]
gi|209502357|gb|EEA02368.1| GTP-binding protein Era [Burkholderia sp. H160]
Length = 287
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N +VG KV+ SRK TT H + G+ T D Q DTPG
Sbjct: 2 VAIVGRPNVGKSTLMNALVGQKVSITSRKAQTTRHRITGINTLEDAQYIFVDTPGFQTKH 61
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
SG ++ + V S ++V + ++ V + R D +V+ LI P K +
Sbjct: 62 SGALNRSLNRAVTSTLTSV---DAILFVIEAGR-FGPDDQKVLDLI-------PAKVPTL 110
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERI 292
L NK+D V+ K L +Q L + I
Sbjct: 111 LIANKLDRVSDKDSLFPFMQQMSTLREFNEI 141
>gi|325681534|ref|ZP_08161059.1| ribosome biogenesis GTPase Era [Ruminococcus albus 8]
gi|324106801|gb|EGC01092.1| ribosome biogenesis GTPase Era [Ruminococcus albus 8]
Length = 298
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 91/173 (52%), Gaps = 10/173 (5%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+++ V I G NAGKSS++N +VG K+AAVS K TT ++ GV+TK +TQ DTPG+
Sbjct: 3 RNIFVTIAGRANAGKSSLLNALVGEKIAAVSDKPQTTRTKITGVLTKGETQFVFMDTPGM 62
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ S V E+ ++++++ D + ++ + +I+ + +
Sbjct: 63 HKAKNKLSEHMVNTVNETIAGV----DMIILMCDCTKKISDNEKSLIQSFK------GGR 112
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K +L +NK+DL+ K+D++ ++ L +E + S + GL + L
Sbjct: 113 SKVILALNKIDLLDNKEDVIAKLAEYSALYDFEEVVPISVAENDGLDIIMDIL 165
>gi|420174669|ref|ZP_14681117.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM061]
gi|420192318|ref|ZP_14698178.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM023]
gi|394244573|gb|EJD89908.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM061]
gi|394261529|gb|EJE06326.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM023]
Length = 299
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D +RV A + ++ + +M + +V+ + D ++ +++ +
Sbjct: 63 G--IHKPKHKLGDYMMRV--AKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV + K+ EQ++ + I S L+G + L
Sbjct: 114 -KTPIFLVLNKIDLVHPDTLMPKI-EQYQSYMDFTDIIPISALEGMNVDHFIDVL 166
>gi|418605497|ref|ZP_13168821.1| GTP-binding protein Era [Staphylococcus epidermidis VCU041]
gi|418616397|ref|ZP_13179322.1| GTP-binding protein Era [Staphylococcus epidermidis VCU120]
gi|420183229|ref|ZP_14689362.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM049]
gi|420194865|ref|ZP_14700662.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM021]
gi|420214027|ref|ZP_14719307.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH05005]
gi|420216485|ref|ZP_14721693.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH05001]
gi|420220513|ref|ZP_14725472.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH04008]
gi|420232082|ref|ZP_14736724.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH051668]
gi|420234729|ref|ZP_14739289.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH051475]
gi|374402386|gb|EHQ73416.1| GTP-binding protein Era [Staphylococcus epidermidis VCU041]
gi|374821223|gb|EHR85290.1| GTP-binding protein Era [Staphylococcus epidermidis VCU120]
gi|394249692|gb|EJD94905.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM049]
gi|394263925|gb|EJE08646.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM021]
gi|394283949|gb|EJE28110.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH05005]
gi|394285866|gb|EJE29932.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH04008]
gi|394291851|gb|EJE35634.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH05001]
gi|394301804|gb|EJE45258.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH051668]
gi|394303972|gb|EJE47382.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH051475]
Length = 299
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D +RV A + ++ + +M + +V+ + D ++ +++ +
Sbjct: 63 G--IHKPKHKLGDYMMRV--AKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV + K+ EQ++ + I S L+G + L
Sbjct: 114 -KTPIFLVLNKIDLVHPDTMMPKI-EQYQSYMDFTDIIPISALEGLNVDHFIDVL 166
>gi|241890023|ref|ZP_04777321.1| GTP-binding protein Era [Gemella haemolysans ATCC 10379]
gi|241863645|gb|EER68029.1| GTP-binding protein Era [Gemella haemolysans ATCC 10379]
Length = 302
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 98/186 (52%), Gaps = 15/186 (8%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
EE K+ V IIG PNAGKS+++N ++ K+A +S K TT + + GV T D+QI D
Sbjct: 3 EEQIKTGFVTIIGRPNAGKSTLLNNILKQKIAIMSDKPQTTRNIINGVYTDNDSQIVFID 62
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG ++K + D +++ S SA+ E++ ++ + D +I +++ +
Sbjct: 63 TPG--IHKPKHRLGDYMMKLAS--SAIQESEIVYLIINASEKFGPGDQHLINIVKEL--- 115
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALT----QY 309
K L +NK+DL++ ++ L+++ E +K L + I S LK + L +Y
Sbjct: 116 ---KVPTFLLINKIDLISPEQ-LIQIIEFYKDLYDFVEIVPISALKSINVDNLLNTTKKY 171
Query: 310 LMEQFK 315
L FK
Sbjct: 172 LQPSFK 177
>gi|218677582|ref|ZP_03525479.1| GTP-binding protein Era [Rhizobium etli CIAT 894]
Length = 301
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N +VG KV+ VS K TT V G+ + QI DTPG+ +
Sbjct: 26 VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAIVRGIAIHDNAQIVFMDTPGIFKPR 85
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW ++++++ D R L ++ ++ + +Q ++
Sbjct: 86 RRLD----RAMVTSAWGGAKDADLIVLLIDSERGLRGDAEAILEGLKEV------RQPKI 135
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V ++DLL +A +ER FM S G+G + YL
Sbjct: 136 LLLNKIDRVN-REDLLALAAAANEKIAFERTFMISAENGSGCDDVMDYL 183
>gi|374385578|ref|ZP_09643081.1| GTP-binding protein Era [Odoribacter laneus YIT 12061]
gi|373225280|gb|EHP47614.1| GTP-binding protein Era [Odoribacter laneus YIT 12061]
Length = 293
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 97/177 (54%), Gaps = 12/177 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+++N +VG K++ ++ K+ TT H + G++ + QI DTP
Sbjct: 2 NHKSGFVNIIGNPNVGKSTLMNRLVGEKISIITSKSQTTRHRIKGIVNDENFQIVFSDTP 61
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G++ K Y ++ +E + SA+ ++++ V DV + + IE++ + A
Sbjct: 62 GVV--KPSYKMQE--CMLEFSKSALTDADIILYVTDVVEDMLKNND----FIEQVKRSAA 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
P +L +NK+DL T++K L + +++K L IF S + + L Q ++E
Sbjct: 114 P---ILLVINKIDLTTQEK-LEDLFDKWKSLLPQAEIFPVSATENFNVDHLYQRILE 166
>gi|329766983|ref|ZP_08258511.1| GTP-binding protein Era [Gemella haemolysans M341]
gi|328837708|gb|EGF87333.1| GTP-binding protein Era [Gemella haemolysans M341]
Length = 302
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 98/186 (52%), Gaps = 15/186 (8%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
EE K+ V IIG PNAGKS+++N ++ K+A +S K TT + + GV T D+QI D
Sbjct: 3 EEQIKTGFVTIIGRPNAGKSTLLNNILQQKIAIMSDKPQTTRNIINGVYTDNDSQIVFID 62
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG ++K + D +++ S SA+ E++ ++ + D +I +++ +
Sbjct: 63 TPG--IHKPKHRLGDYMMKLAS--SAIQESEIVYLIINASEKFGPGDQHLINIVKEL--- 115
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALT----QY 309
K L +NK+DL++ ++ L+++ E +K L + I S LK + L +Y
Sbjct: 116 ---KVPTFLLINKIDLISPEQ-LIQIIEFYKDLYDFVEIVPISALKSINVDNLLNTTKKY 171
Query: 310 LMEQFK 315
L FK
Sbjct: 172 LQPSFK 177
>gi|161760697|ref|YP_253264.2| GTP-binding protein Era [Staphylococcus haemolyticus JCSC1435]
gi|317374941|sp|Q4L6R7.2|ERA_STAHJ RecName: Full=GTPase Era
Length = 299
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 91/175 (52%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFMNRVIGHKIAIMSDKAQTTRNKIQGVMTRNDAQIIFLDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D +RV A + ++ + +M + +V+ + D ++ +++ +
Sbjct: 63 G--IHKPKHKLGDYMMRV--AKNTLSEIDAIMFMVNVNEEIGRGDEYIMEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV L+ EQ++ + I S L+G + L
Sbjct: 114 -KTPVFLVLNKIDLVHPDA-LMPRIEQYQKYMNFTEIVPISALEGLNVDHFIDVL 166
>gi|418614664|ref|ZP_13177626.1| GTP-binding protein Era [Staphylococcus epidermidis VCU118]
gi|374819200|gb|EHR83328.1| GTP-binding protein Era [Staphylococcus epidermidis VCU118]
Length = 299
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 15/181 (8%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D +RV A + ++ + +M + +V+ + D ++ +++ +
Sbjct: 63 G--IHKPKHKLGDYMMRV--AKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYLM 311
K L +NK+DLV + K+ EQ++ + I S L+G + L YL
Sbjct: 114 -KTPIFLVLNKIDLVHPDTLMPKI-EQYQSYMDFTDIIPISALEGLNVDHFIDVLKSYLP 171
Query: 312 E 312
E
Sbjct: 172 E 172
>gi|121728973|ref|ZP_01681977.1| GTP-binding protein Era [Vibrio cholerae V52]
gi|147674346|ref|YP_001217962.1| GTP-binding protein Era [Vibrio cholerae O395]
gi|227118902|ref|YP_002820798.1| GTP-binding protein Era [Vibrio cholerae O395]
gi|262167291|ref|ZP_06035001.1| GTP-binding protein Era [Vibrio cholerae RC27]
gi|424592160|ref|ZP_18031584.1| GTP-binding protein Era [Vibrio cholerae CP1037(10)]
gi|121628739|gb|EAX61206.1| GTP-binding protein Era [Vibrio cholerae V52]
gi|146316229|gb|ABQ20768.1| GTP-binding protein Era [Vibrio cholerae O395]
gi|227014352|gb|ACP10562.1| GTP-binding protein Era [Vibrio cholerae O395]
gi|262024266|gb|EEY42957.1| GTP-binding protein Era [Vibrio cholerae RC27]
gi|408029775|gb|EKG66477.1| GTP-binding protein Era [Vibrio cholerae CP1037(10)]
Length = 324
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 80/154 (51%), Gaps = 10/154 (6%)
Query: 124 RQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMT 183
R E + EDQ V I+G PN GKS+++N ++G K++ SRK TT H ++GV T
Sbjct: 15 RSEGQTATSTPEDQHCGFVAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVET 74
Query: 184 KADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRV 243
+ Q DTPGL + + ++ + S+ S VNL VL VV H T+ D V
Sbjct: 75 DGNYQAIYVDTPGLHIEEKRAINRLMNRAASSSLSDVNL--VLFVVEGT--HWTADDEMV 130
Query: 244 IRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLL 277
++ K P VLC+NKVD V + +++
Sbjct: 131 ---FNKLQKANFPV---VLCVNKVDQVKDRNEVM 158
>gi|352085715|ref|ZP_08953306.1| GTP-binding protein Era [Rhodanobacter sp. 2APBS1]
gi|389798031|ref|ZP_10201059.1| GTPase Era [Rhodanobacter sp. 116-2]
gi|351681656|gb|EHA64780.1| GTP-binding protein Era [Rhodanobacter sp. 2APBS1]
gi|388445926|gb|EIM01979.1| GTPase Era [Rhodanobacter sp. 116-2]
Length = 310
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 10/173 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V + G PN GKS+++N ++G +++ S + TT H +LG+ T QI DTPGL
Sbjct: 22 VALAGRPNVGKSTLLNALIGFRLSITSPRPQTTRHRILGINTSEAGQIMYVDTPGLHRGA 81
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
++ + SA S V+L ++ V + R ++ L+E Q+ P R+
Sbjct: 82 KRAMNRSLNRAARSAISDVDL---VVQVIEAGRWTDEDEALYAALVE----QSSP---RL 131
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NKVDL K +L + Y+ I S LKG GL+ L Q ++++
Sbjct: 132 LVINKVDLNKDKTVMLPFVAELVAKHSYDEIHYVSALKGQGLQELEQAILQRL 184
>gi|116251278|ref|YP_767116.1| GTP-binding protein Era [Rhizobium leguminosarum bv. viciae 3841]
gi|115255926|emb|CAK07007.1| putative GTP and RNA-binding cell cycle regulator [Rhizobium
leguminosarum bv. viciae 3841]
Length = 313
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N +VG KV+ VS K TT V G+ + QI DTPG+ +
Sbjct: 24 VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAIVRGIAIHDNAQIVFMDTPGIFKPR 83
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW ++++++ D R L ++ ++ + +Q ++
Sbjct: 84 RRLD----RAMVTSAWGGARDADLIVLLIDSERGLRGDAEAILEGLKEV------RQPKI 133
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V ++DLL +A ++R FM S G+G L YL
Sbjct: 134 LLLNKIDRVN-REDLLALAAAANEKIAFDRTFMISAENGSGCDDLMDYL 181
>gi|392531590|ref|ZP_10278727.1| GTP-binding protein Era [Carnobacterium maltaromaticum ATCC 35586]
gi|414083900|ref|YP_006992608.1| GTP-binding protein Era [Carnobacterium maltaromaticum LMA28]
gi|412997484|emb|CCO11293.1| GTP-binding protein Era [Carnobacterium maltaromaticum LMA28]
Length = 299
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+++N +VG K+A +S K TT +++ G+ T + Q+ DTP
Sbjct: 3 EHKSGFVAIIGRPNVGKSTLLNRVVGQKIAIMSDKAQTTRNKIQGIYTTPEAQMIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K H+ V+SA S + +V++++ + D+ +I ++ G + P
Sbjct: 63 GIHKPK----HRLGDFMVDSALSTLREVDVIILMVNAEEKRGPGDNFIIEKLQ--GNKTP 116
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
L +NK+D V +K LL++ + ++ L +E+I S +G ++ L L+
Sbjct: 117 ----IFLVINKIDKVHPEK-LLEIIDNYRELLPFEQIVPISATEGNNVETLLNELL 167
>gi|340030088|ref|ZP_08666151.1| GTPase Era [Paracoccus sp. TRP]
Length = 303
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N MVG KV+ V+ K TT + G+ + D+QI DTPG+ +
Sbjct: 9 VALIGEPNAGKSTLLNQMVGAKVSIVTHKVQTTRARIRGIAMRGDSQIVFVDTPGIFRPR 68
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW +V++++ + HR LT +I + + P
Sbjct: 69 RRLD----RSMVAAAWGGAADADVVLLLIEAHRGLTPGVEAIIEQLREHAGKTPV----A 120
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V K + LL +A++ + FM S KG G L +L
Sbjct: 121 LVINKIDRV-KAEALLALAQEVNGAFDFVSTFMISAEKGHGCDDLLDWL 168
>gi|307187907|gb|EFN72820.1| GTP-binding protein era-like protein [Camponotus floridanus]
Length = 344
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 20/191 (10%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+QKS+ + I+GAPNAGKS+++N ++ + S K +TT + + + DTQ+ DTP
Sbjct: 49 NQKSLKIAILGAPNAGKSTLVNKLIKRSICPTSSKVHTTQTKTDAIYCEDDTQLIFIDTP 108
Query: 196 GLM-------LNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLI- 247
G++ N +G D +V + +A V + + ++ H+ D ++ L+
Sbjct: 109 GVVSMYTSKRYNLAGSFRNDPQVSLAAA-DIVGIVQEANNIYTRHK----IDKNILELLT 163
Query: 248 ERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQF---KHLPGYERIFMTSGLKGAGLK 304
E++ + P +L NKVD + +K LL++ + F K + IFM S L G G+
Sbjct: 164 EKIINKIP----MILIFNKVDKLRRKDVLLELVDIFVKSKESLKFSDIFMVSALTGDGID 219
Query: 305 ALTQYLMEQFK 315
L YL++ K
Sbjct: 220 DLRTYLLDSAK 230
>gi|317154877|ref|YP_004122925.1| GTP-binding protein Era [Desulfovibrio aespoeensis Aspo-2]
gi|316945128|gb|ADU64179.1| GTP-binding protein Era [Desulfovibrio aespoeensis Aspo-2]
Length = 302
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 91/174 (52%), Gaps = 10/174 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N ++G KVA VS + TT + + G+++ + Q+ DTPG+ +
Sbjct: 7 VALIGPPNAGKSTLMNQLLGQKVAIVSPRPQTTRNRISGILSTDEAQVVFLDTPGIHQLR 66
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSP---DSRVIRLIERMGKQAPPKQ 258
K + +E+AWSA+ +V++V+ D + P D + L++ + + P
Sbjct: 67 G----KMNRFLLEAAWSALAGADVVVVLLDASLYAAKPYMMDKEIKPLVKPVAETGRPV- 121
Query: 259 KRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
++ +NK+D + K +L V + L S L+G G L + +++
Sbjct: 122 --LVAVNKIDRIKDKAGMLPVLARAAELWPAAEFIPVSALRGQGTDVLLKRILD 173
>gi|386714855|ref|YP_006181178.1| GTP-binding protein Era [Halobacillus halophilus DSM 2266]
gi|384074411|emb|CCG45904.1| GTP-binding protein Era [Halobacillus halophilus DSM 2266]
Length = 301
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 11/173 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+ +N ++G K+A +S K TT +++ GVMT ++QI DTPG+
Sbjct: 6 KSGFVTIVGRPNVGKSTFMNRVIGEKIAIMSDKPQTTRNKIQGVMTDKESQIVFIDTPGI 65
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K HK V A + +N + ++ + + D +I ++R+
Sbjct: 66 HKPK----HKLGDYMVNVAENTLNEVDAILFMINAEEGYGRGDQFIIDRLQRV------N 115
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
Q L +NK+D V + LL + EQ+K +E I S L+G + L L
Sbjct: 116 QPVYLIINKIDRVHPDQ-LLPLIEQYKEKLDFEEIIPISALEGNNVNHLLDVL 167
>gi|312795543|ref|YP_004028465.1| GTP-binding protein era [Burkholderia rhizoxinica HKI 454]
gi|312167318|emb|CBW74321.1| GTP-binding protein era [Burkholderia rhizoxinica HKI 454]
Length = 323
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 11/136 (8%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++N +VG KV+ SRK TT H + G+ T D Q DTPG
Sbjct: 38 IAIVGRPNVGKSTLMNALVGQKVSITSRKAQTTRHRITGIRTLDDAQFIFVDTPGFQTRH 97
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
++ + V S ++V +V++ V + R+ D RV+ LI PP V
Sbjct: 98 GSALNRSLNRAVTSTLTSV---DVVLFVVEAGRY-GPDDQRVLELI-------PPSVPTV 146
Query: 262 LCMNKVDLVTKKKDLL 277
L NK+D ++ K LL
Sbjct: 147 LLANKIDKLSDKSALL 162
>gi|323499982|ref|ZP_08104938.1| GTPase Era [Vibrio sinaloensis DSM 21326]
gi|323314948|gb|EGA68003.1| GTPase Era [Vibrio sinaloensis DSM 21326]
Length = 325
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 12/150 (8%)
Query: 129 EEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQ 188
E+ E+Q V I+G PN GKS+++N ++G K++ SRK TT H ++GV T+ D Q
Sbjct: 21 EQATSPENQHCGFVAIVGRPNVGKSTLLNRILGQKISITSRKPQTTRHRIMGVDTEGDYQ 80
Query: 189 ICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLI 247
DTPGL + + ++ + S+ S VNL V F V H T+ D V +
Sbjct: 81 AIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNL-----VFFLVDGTHWTNDDEMV---L 132
Query: 248 ERMGKQAPPKQKRVLCMNKVDLVTKKKDLL 277
++ K P VLC+NKVD V + D++
Sbjct: 133 TKLQKSNFPV---VLCVNKVDNVQDRNDVM 159
>gi|402567142|ref|YP_006616487.1| GTP-binding protein Era [Burkholderia cepacia GG4]
gi|402248339|gb|AFQ48793.1| GTP-binding protein Era [Burkholderia cepacia GG4]
Length = 287
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++N +VG K++ SRK TT H + G+ T D Q DTPG
Sbjct: 2 IAIVGRPNVGKSTLMNALVGQKISITSRKAQTTRHRITGINTFDDAQFVFVDTPGFQTRH 61
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S ++ + V S ++V+ V++ V + R D +V+ LI PP +
Sbjct: 62 STALNRSLNRAVTSTLTSVD---VILFVIEAGR-FGPDDQKVLDLI-------PPGMPTL 110
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHL 286
L NK+D V K L +Q L
Sbjct: 111 LIANKIDRVADKATLFPFMQQMSGL 135
>gi|350545379|ref|ZP_08914867.1| GTP-binding protein Era [Candidatus Burkholderia kirkii UZHbot1]
gi|350526842|emb|CCD39433.1| GTP-binding protein Era [Candidatus Burkholderia kirkii UZHbot1]
Length = 299
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 79/169 (46%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N +VG KV+ SRK TT H + G+ T DTQ DTPG
Sbjct: 14 VAIVGRPNVGKSTLMNALVGQKVSITSRKAQTTRHRITGINTIDDTQYIFVDTPGFQTRH 73
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
SG ++ + V S ++V + ++ V + R D +V+ LI P +
Sbjct: 74 SGALNRSLNRAVSSTLTSV---DAILFVIEAGR-FGPDDQKVLDLI-------PTGTPTL 122
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L NK+D V K L +Q L + I S +K L Q +
Sbjct: 123 LIANKLDRVGDKDSLFPFMQQMSTLRDFREIVPLSAKNPDDIKRLLQIV 171
>gi|418633118|ref|ZP_13195535.1| GTP-binding protein Era [Staphylococcus epidermidis VCU129]
gi|420190179|ref|ZP_14696123.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM037]
gi|420204483|ref|ZP_14710041.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM015]
gi|374839937|gb|EHS03444.1| GTP-binding protein Era [Staphylococcus epidermidis VCU129]
gi|394259070|gb|EJE03940.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM037]
gi|394273493|gb|EJE17924.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM015]
Length = 299
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 15/181 (8%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D +RV A + ++ + +M + +V+ + D ++ +++ +
Sbjct: 63 G--IHKPKHKLGDYMMRV--AKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYLM 311
K L +NK+DLV + K+ EQ++ + I S L+G + L YL
Sbjct: 114 -KTPIFLVLNKIDLVHPDTLMPKI-EQYQSYMDFTDIIPISALEGLNVDHFIDVLKSYLP 171
Query: 312 E 312
E
Sbjct: 172 E 172
>gi|384082328|ref|ZP_09993503.1| GTPase Era [gamma proteobacterium HIMB30]
Length = 297
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 10/175 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N+++G K++ SRK TT H VLG+ T+ + QI DTPG+ ++
Sbjct: 8 VAIVGRPNVGKSTLLNHILGFKLSITSRKPQTTRHRVLGIWTENECQIAFVDTPGMHTDQ 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
++ + E A S V+ +V+ + D RV + R AP +
Sbjct: 68 PKAMNRVMNQTAEQALSGVD----AVVMLTDGKIWNELDQRVYEKVRR--SDAP----KY 117
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
+NKVD + K +LL + ++ +F S LK L+ L L Q D
Sbjct: 118 WVINKVDKLNNKNELLPHIQNTVETHRFDEVFPVSALKNLNLEPLLGALKLQMPD 172
>gi|206901698|ref|YP_002251036.1| GTP-binding protein Era [Dictyoglomus thermophilum H-6-12]
gi|206740801|gb|ACI19859.1| GTP-binding protein Era [Dictyoglomus thermophilum H-6-12]
Length = 297
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 28/186 (15%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ K +GI+G PNAGKS++IN +VG KV+ V+ K TT +LGV+T D Q DTP
Sbjct: 3 NTKLAYIGIVGKPNAGKSTLINLLVGEKVSIVADKPQTTRQRILGVLTLEDAQFIFLDTP 62
Query: 196 GLMLNK---SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGK 252
G K Y K +K +E + ++++ V D L + +++ ++ GK
Sbjct: 63 GWFPPKHLLGEYMQKTIKKTIEDS-------DIVLYVIDSSVELDEDNRTLLKFVKDQGK 115
Query: 253 QAPPKQKRVLCMNKVDLVT------KKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
++ +NK+D+V+ +KK+++ + + ERI S L G + L
Sbjct: 116 PY------LVLLNKIDMVSPKVLEERKKEVISLGVE------EERIMEISALYGTNKELL 163
Query: 307 TQYLME 312
+ L E
Sbjct: 164 IEKLKE 169
>gi|163744854|ref|ZP_02152214.1| GTP-binding protein Era [Oceanibulbus indolifex HEL-45]
gi|161381672|gb|EDQ06081.1| GTP-binding protein Era [Oceanibulbus indolifex HEL-45]
Length = 302
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 90/170 (52%), Gaps = 11/170 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N MVG KV+ V+ K TT + GV + TQ+ DTPGL +
Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGQTQLVFVDTPGLFQPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW +V++++ + HR +T V R++E +G A K +RV
Sbjct: 68 RRLD----RAMVAAAWGGAADADVVVLLIEAHRGMTEG---VERILEELGNIA--KGRRV 118
Query: 262 -LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V + LL + E+ + FM S +G G+ L +L
Sbjct: 119 ALAINKIDRV-EAPVLLGLTEKMNARFDFIETFMISAERGHGIDTLRHWL 167
>gi|424874569|ref|ZP_18298231.1| GTP-binding protein Era [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393170270|gb|EJC70317.1| GTP-binding protein Era [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 313
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N +VG KV+ VS K TT V G+ + QI DTPG+ +
Sbjct: 24 VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAIVRGIAIHDNAQIVFMDTPGIFKPR 83
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW ++++++ D R L ++ ++ + +Q ++
Sbjct: 84 RRLD----RAMVTSAWGGARDADLIVLLIDSERGLRGDAEAILEGLKEV------RQPKI 133
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V ++DLL +A ++R FM S G+G L YL
Sbjct: 134 LLLNKIDRVN-REDLLALAAAANEKIAFDRTFMISAENGSGCDDLMDYL 181
>gi|254252844|ref|ZP_04946162.1| Small GTP-binding protein domain [Burkholderia dolosa AUO158]
gi|124895453|gb|EAY69333.1| Small GTP-binding protein domain [Burkholderia dolosa AUO158]
Length = 299
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++N +VG K++ SRK TT H + G+ T D Q DTPG
Sbjct: 14 IAIVGRPNVGKSTLMNALVGQKISITSRKAQTTRHRITGINTIDDAQFVFVDTPGFQTRH 73
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S ++ + V S ++V+ V++ V + R D +V+ LI PP +
Sbjct: 74 STALNRSLNRAVTSTLTSVD---VILFVIEAGR-FGPDDQKVLDLI-------PPGMPTL 122
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHL 286
L NK+D V+ K L +Q L
Sbjct: 123 LITNKIDRVSDKTTLYPFMQQMSAL 147
>gi|27468172|ref|NP_764809.1| GTP-binding protein Era [Staphylococcus epidermidis ATCC 12228]
gi|251810984|ref|ZP_04825457.1| GTP-binding protein Era [Staphylococcus epidermidis BCM-HMP0060]
gi|282876007|ref|ZP_06284874.1| GTP-binding protein Era [Staphylococcus epidermidis SK135]
gi|293366472|ref|ZP_06613149.1| GTP-binding protein Era [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417647011|ref|ZP_12296860.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU144]
gi|417655966|ref|ZP_12305657.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU028]
gi|417659631|ref|ZP_12309231.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU045]
gi|417908663|ref|ZP_12552420.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU037]
gi|417912203|ref|ZP_12555898.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU105]
gi|417913713|ref|ZP_12557376.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU109]
gi|418325625|ref|ZP_12936831.1| GTP-binding protein Era [Staphylococcus epidermidis VCU071]
gi|418328382|ref|ZP_12939497.1| GTP-binding protein Era [Staphylococcus epidermidis 14.1.R1.SE]
gi|418606698|ref|ZP_13169968.1| GTP-binding protein Era [Staphylococcus epidermidis VCU057]
gi|418609422|ref|ZP_13172574.1| GTP-binding protein Era [Staphylococcus epidermidis VCU065]
gi|418621370|ref|ZP_13184146.1| GTP-binding protein Era [Staphylococcus epidermidis VCU123]
gi|418625271|ref|ZP_13187924.1| GTP-binding protein Era [Staphylococcus epidermidis VCU125]
gi|418629390|ref|ZP_13191898.1| GTP-binding protein Era [Staphylococcus epidermidis VCU127]
gi|418630474|ref|ZP_13192955.1| GTP-binding protein Era [Staphylococcus epidermidis VCU128]
gi|418665173|ref|ZP_13226623.1| GTP-binding protein Era [Staphylococcus epidermidis VCU081]
gi|419769466|ref|ZP_14295560.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-250]
gi|419771680|ref|ZP_14297726.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-K]
gi|420163061|ref|ZP_14669808.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM095]
gi|420165560|ref|ZP_14672251.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM088]
gi|420167964|ref|ZP_14674616.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM087]
gi|420170276|ref|ZP_14676837.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM070]
gi|420172620|ref|ZP_14679119.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM067]
gi|420184540|ref|ZP_14690649.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM040]
gi|420187229|ref|ZP_14693250.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM039]
gi|420197447|ref|ZP_14703171.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM020]
gi|420201697|ref|ZP_14707307.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM018]
gi|420206114|ref|ZP_14711624.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM008]
gi|420209073|ref|ZP_14714511.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM003]
gi|420211230|ref|ZP_14716604.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM001]
gi|420221646|ref|ZP_14726573.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH08001]
gi|420225764|ref|ZP_14730591.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH06004]
gi|420227355|ref|ZP_14732125.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH05003]
gi|420229671|ref|ZP_14734376.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH04003]
gi|421606938|ref|ZP_16048189.1| GTPase Era [Staphylococcus epidermidis AU12-03]
gi|38257330|sp|Q8CP21.1|ERA_STAES RecName: Full=GTPase Era
gi|27315718|gb|AAO04853.1|AE016748_87 GTP-binding protein (Era/TrmE family) [Staphylococcus epidermidis
ATCC 12228]
gi|251805494|gb|EES58151.1| GTP-binding protein Era [Staphylococcus epidermidis BCM-HMP0060]
gi|281295032|gb|EFA87559.1| GTP-binding protein Era [Staphylococcus epidermidis SK135]
gi|291319241|gb|EFE59610.1| GTP-binding protein Era [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329725360|gb|EGG61843.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU144]
gi|329735268|gb|EGG71560.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU045]
gi|329737216|gb|EGG73470.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU028]
gi|341651214|gb|EGS75019.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU105]
gi|341654735|gb|EGS78473.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU109]
gi|341656024|gb|EGS79747.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU037]
gi|365228227|gb|EHM69412.1| GTP-binding protein Era [Staphylococcus epidermidis VCU071]
gi|365232040|gb|EHM73053.1| GTP-binding protein Era [Staphylococcus epidermidis 14.1.R1.SE]
gi|374407474|gb|EHQ78336.1| GTP-binding protein Era [Staphylococcus epidermidis VCU057]
gi|374407636|gb|EHQ78488.1| GTP-binding protein Era [Staphylococcus epidermidis VCU065]
gi|374409148|gb|EHQ79948.1| GTP-binding protein Era [Staphylococcus epidermidis VCU081]
gi|374825413|gb|EHR89349.1| GTP-binding protein Era [Staphylococcus epidermidis VCU125]
gi|374829314|gb|EHR93118.1| GTP-binding protein Era [Staphylococcus epidermidis VCU123]
gi|374834093|gb|EHR97753.1| GTP-binding protein Era [Staphylococcus epidermidis VCU127]
gi|374837664|gb|EHS01227.1| GTP-binding protein Era [Staphylococcus epidermidis VCU128]
gi|383358085|gb|EID35546.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-250]
gi|383360499|gb|EID37894.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-K]
gi|394234750|gb|EJD80324.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM095]
gi|394235361|gb|EJD80933.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM088]
gi|394237992|gb|EJD83478.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM087]
gi|394240614|gb|EJD86037.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM070]
gi|394241781|gb|EJD87190.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM067]
gi|394256208|gb|EJE01141.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM039]
gi|394257191|gb|EJE02113.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM040]
gi|394266254|gb|EJE10900.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM020]
gi|394271965|gb|EJE16444.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM018]
gi|394277953|gb|EJE22270.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM008]
gi|394279301|gb|EJE23609.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM003]
gi|394281683|gb|EJE25909.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM001]
gi|394290272|gb|EJE34136.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH08001]
gi|394293198|gb|EJE36921.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH06004]
gi|394297224|gb|EJE40831.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH05003]
gi|394298965|gb|EJE42520.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIH04003]
gi|406657407|gb|EKC83795.1| GTPase Era [Staphylococcus epidermidis AU12-03]
Length = 299
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D +RV A + ++ + +M + +V+ + D ++ +++ +
Sbjct: 63 G--IHKPKHKLGDYMMRV--AKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV + K+ EQ++ + I S L+G + L
Sbjct: 114 -KTPIFLVLNKIDLVHPDTLMPKI-EQYQSYMDFTDIIPISALEGLNVDHFIDVL 166
>gi|114320504|ref|YP_742187.1| GTP-binding protein Era [Alkalilimnicola ehrlichii MLHE-1]
gi|114226898|gb|ABI56697.1| GTP-binding protein Era [Alkalilimnicola ehrlichii MLHE-1]
Length = 315
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 12/176 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++G PN GKS+++N ++G K++ V+RK TT +LGV + QI DTPGL
Sbjct: 27 VALVGRPNVGKSTLLNQLLGQKISIVTRKPQTTRQRILGVCHRDGAQIVYVDTPGL---- 82
Query: 202 SGYSHKDVKVRVESAWSAVN-LFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKR 260
+ +D + +A N L +V +VVF V R P+ + +ER+ ++ P
Sbjct: 83 --HQRRDKALNRYLNRTAANALADVDLVVFLVDRLHFKPEDEAV--LERLKRRDVPV--- 135
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
+L +NKVD + K LL + + + S LKG L L + ++ Q +
Sbjct: 136 ILAINKVDRLRDKAQLLPHIQWLSEQHPFVEVVPLSALKGENLAPLEEAILRQLPE 191
>gi|325956928|ref|YP_004292340.1| GTPase Era [Lactobacillus acidophilus 30SC]
gi|325333493|gb|ADZ07401.1| GTPase Era [Lactobacillus acidophilus 30SC]
Length = 301
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 94/186 (50%), Gaps = 18/186 (9%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
++E+ KS V +IG PN GKS+++NY+VG KVA S K TT + + G+ T D QI
Sbjct: 1 MEEKKFKSGFVALIGRPNVGKSTLMNYLVGQKVAITSNKPQTTRNRISGIYTSDDMQIVF 60
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERM 250
DTPG+ H + ++ A S +L +V +V+F V + D + L++ +
Sbjct: 61 VDTPGIF-----KPHSKLDDYMDKA-SLSSLNDVDLVLFMVEPEKIGKGDQYIADLLKEV 114
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKAL 306
K L +NKVD + K LL + + + L G++ I S +G G L L
Sbjct: 115 ------KVPVFLVINKVDQIHPNK-LLPIMDSYHKLEGFKEILPISATQGIGIEDLLATL 167
Query: 307 TQYLME 312
+YL E
Sbjct: 168 NKYLPE 173
>gi|73662498|ref|YP_301279.1| GTP-binding protein Era [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|82592828|sp|Q49Y10.1|ERA_STAS1 RecName: Full=GTPase Era
gi|72495013|dbj|BAE18334.1| putative GTPase [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
Length = 299
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 90/165 (54%), Gaps = 11/165 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS + IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFISIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTQEDAQIIFLDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D +RV A + ++ + +M + +V+ + D ++ +++ +
Sbjct: 63 G--IHKPKHKLGDYMMRV--ATNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKTI----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKG 300
K L +NK+DLV +L+ E++K + I S L+G
Sbjct: 114 -KTPVFLVLNKIDLV-HPDELMPRIEKYKKYMDFTEIVPISALEG 156
>gi|408421057|ref|YP_006762471.1| GTP-binding protein Era [Desulfobacula toluolica Tol2]
gi|405108270|emb|CCK81767.1| Era: GTP-binding protein [Desulfobacula toluolica Tol2]
Length = 298
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 93/179 (51%), Gaps = 19/179 (10%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
E + +S GIIGAPNAGKS+++N ++G K++ S+K TT +LG++ +QI D
Sbjct: 6 ETNFRSGFAGIIGAPNAGKSTLLNQVLGQKISITSKKPQTTRDRILGIVNTVSSQIVFVD 65
Query: 194 TPGLMLNKSGYSHKDVKVR----VESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIER 249
TPG+ HK + V+ A A+ +V++ + D S + +I +++
Sbjct: 66 TPGI--------HKSTTLLNRRIVDQALLALEDVDVILFMVDAAARNYSAEKLIISQLKK 117
Query: 250 MGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
K VL +NK+DLV K + ++ E+F+ L ++ I S +K +K L +
Sbjct: 118 TSKPV------VLALNKIDLVDKGL-VYRLVEEFRKLHDFKAIIPVSAIKDIQVKNLIE 169
>gi|421188898|ref|ZP_15646230.1| GTPase [Oenococcus oeni AWRIB419]
gi|399964231|gb|EJN98885.1| GTPase [Oenococcus oeni AWRIB419]
Length = 305
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 93/182 (51%), Gaps = 10/182 (5%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
+ + KS V IIG PN GKS+++NY++G KV +S K TT +++ G+ T + Q+ D
Sbjct: 2 DNEYKSGFVAIIGRPNVGKSTLLNYIIGQKVTIISSKAQTTRNKIAGIYTTEEAQVVFLD 61
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG+ Y+ D + ++++ A+N + + V D D+ +I ++++ K
Sbjct: 62 TPGI---HKPYNSLDEYME-KASFGALNEADAVWFVVDATEKRGGGDNFIIERLKKI-KN 116
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFK-HLPGYERIFMTSGLKGAGLKALTQYLME 312
P L +NK+DL+ KK DL + + + ++ S G + AL ++E
Sbjct: 117 TPI----YLLVNKIDLIKKKNDLFQAISSYTVDSLDWSEVYPISAKSGEQVNALVDDVIE 172
Query: 313 QF 314
+
Sbjct: 173 KL 174
>gi|288555745|ref|YP_003427680.1| Era/ThdF family GTP-binding protein [Bacillus pseudofirmus OF4]
gi|288546905|gb|ADC50788.1| Era/ThdF family GTP-binding protein [Bacillus pseudofirmus OF4]
Length = 303
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 95/179 (53%), Gaps = 11/179 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V IIG PN GKS+++NY++G K+A +S K TT +++ GV T ++Q+ DTPG+
Sbjct: 9 KSGFVSIIGRPNVGKSTLLNYVIGQKIAIMSDKPQTTRNKIQGVYTSNESQVVFIDTPGI 68
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K HK ++ A + + ++++ V D S + + IER+ + P
Sbjct: 69 HKPK----HKLGDFMMKVAQNTLREVDLILYVVDAGEAFGSGEEFI---IERLKETKTPV 121
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
L +NK+D V + DLL + E ++ + + S L+G+ + L + +++ ++
Sbjct: 122 ---FLVINKIDKV-QPDDLLGIIETYRTKFDFTEVIPVSALQGSNVPTLMEQIVDHLEE 176
>gi|184155316|ref|YP_001843656.1| GTP-binding protein [Lactobacillus fermentum IFO 3956]
gi|227514585|ref|ZP_03944634.1| GTP-binding protein Era [Lactobacillus fermentum ATCC 14931]
gi|260662170|ref|ZP_05863066.1| GTP-binding protein Era [Lactobacillus fermentum 28-3-CHN]
gi|183226660|dbj|BAG27176.1| GTP-binding protein [Lactobacillus fermentum IFO 3956]
gi|227086996|gb|EEI22308.1| GTP-binding protein Era [Lactobacillus fermentum ATCC 14931]
gi|260553553|gb|EEX26445.1| GTP-binding protein Era [Lactobacillus fermentum 28-3-CHN]
Length = 301
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V +IG PN GKS+++NYMVG KVA +S TT +++ G+ T + QI DTPG
Sbjct: 7 KSGFVALIGRPNVGKSTLLNYMVGQKVAIMSNVAQTTRNKIQGIYTSDEAQIVFIDTPG- 65
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
++K D R SA SA++ + ++ V + + D+ + IER+ K +
Sbjct: 66 -IHKPQTRLGDFMER--SALSALDEVDAILFVVPANEKRGAGDNFI---IERLKKV---Q 116
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
Q L +NK+D V DL + Q++ ++++ S L+G + L L++Q
Sbjct: 117 QPIYLVVNKIDQVN-PNDLPDIIAQYEGALPFKKVVPVSALQGNNVNTLINDLVDQL 172
>gi|416125306|ref|ZP_11595904.1| GTP-binding protein Era [Staphylococcus epidermidis FRI909]
gi|420178264|ref|ZP_14684597.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM057]
gi|420180072|ref|ZP_14686332.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM053]
gi|420199500|ref|ZP_14705178.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM031]
gi|319400903|gb|EFV89122.1| GTP-binding protein Era [Staphylococcus epidermidis FRI909]
gi|394246890|gb|EJD92142.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM057]
gi|394251504|gb|EJD96589.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM053]
gi|394272282|gb|EJE16751.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis
NIHLM031]
Length = 299
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D +RV A + ++ + +M + +V+ + D ++ +++ +
Sbjct: 63 G--IHKPKHKLGDYMMRV--AKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV + K+ EQ++ + I S L+G + L
Sbjct: 114 -KTPIFLVLNKIDLVHPDTLMPKI-EQYQSYMDFTDIIPISALEGLNVDHFIDVL 166
>gi|110678687|ref|YP_681694.1| GTP-binding protein Era [Roseobacter denitrificans OCh 114]
gi|109454803|gb|ABG31008.1| GTP-binding protein Era [Roseobacter denitrificans OCh 114]
Length = 302
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 9/169 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N MVG KV+ V+ K TT + GV + D+QI DTPGL +
Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGDSQIVFVDTPGLFQPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS +V++++ + HR +T RV+ + +G+ +
Sbjct: 68 RRLD----RAMVAAAWSGAADADVVVLLVEAHRGVTEGVERVLEGLAEVGQ----GRMVA 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V + + LL +++ + FM S +G G+ L +L
Sbjct: 120 LAINKIDRV-QAEALLALSKDLNERYDFVETFMISAERGHGVDTLRAWL 167
>gi|57867009|ref|YP_188710.1| GTP-binding protein Era [Staphylococcus epidermidis RP62A]
gi|418612786|ref|ZP_13175810.1| GTP-binding protein Era [Staphylococcus epidermidis VCU117]
gi|418626405|ref|ZP_13189017.1| GTP-binding protein Era [Staphylococcus epidermidis VCU126]
gi|81674466|sp|Q5HNY0.1|ERA_STAEQ RecName: Full=GTPase Era
gi|57637667|gb|AAW54455.1| GTP-binding protein Era [Staphylococcus epidermidis RP62A]
gi|374817863|gb|EHR82038.1| GTP-binding protein Era [Staphylococcus epidermidis VCU117]
gi|374832839|gb|EHR96544.1| GTP-binding protein Era [Staphylococcus epidermidis VCU126]
Length = 299
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D +RV A + ++ + +M + +V+ + D ++ +++ +
Sbjct: 63 G--IHKPKHKLGDYMMRV--AKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV + K+ EQ++ + I S L+G + L
Sbjct: 114 -KTPIFLVLNKIDLVHPDTLMPKI-EQYQSYMDFTDIIPISALEGLNVDHFIDVL 166
>gi|386391096|ref|ZP_10075877.1| GTP-binding protein Era [Desulfovibrio sp. U5L]
gi|385731974|gb|EIG52172.1| GTP-binding protein Era [Desulfovibrio sp. U5L]
Length = 305
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 98/179 (54%), Gaps = 12/179 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++G NAGKS+++N ++G KV+ VS K TT + + G++T+ Q DTPGL K
Sbjct: 10 VVMLGPTNAGKSTLLNRVIGQKVSIVSPKPQTTRNSISGILTEEGAQAVFLDTPGLHRQK 69
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFD---VHRHLTSPDSRVIRLIERMGKQAPPKQ 258
G + + + SA++A+ +V++V+ D R L + ++ ++ R+ K +P
Sbjct: 70 RGIA----PLLLRSAYAALTRADVVLVLLDGAQYARRLEGLKNDLLPIV-RVLKDSP--V 122
Query: 259 KRVLCMNKVDLVTKKKDLLKV-AEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
V+ +NK D+V +K +L V A + LPG E +F S L G G+K L L + +
Sbjct: 123 PVVVALNKADVVREKARMLPVLAAVGEALPGAE-LFPVSALTGLGVKELLAALFARLPE 180
>gi|339504903|ref|YP_004692323.1| GTP-binding protein Era [Roseobacter litoralis Och 149]
gi|338758896|gb|AEI95360.1| GTP-binding protein Era [Roseobacter litoralis Och 149]
Length = 302
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 91/171 (53%), Gaps = 13/171 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N MVG KV+ V+ K TT + GV + ++QI DTPGL +
Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGESQIVFVDTPGLFEPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS +V++++ + HR +T R++ + +G Q RV
Sbjct: 68 RRLD----RAMVAAAWSGAADADVVVLLIEAHRGVTEGVERILEGLADVG------QGRV 117
Query: 262 --LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V + + LL +++ + FM S +G G+ AL +L
Sbjct: 118 VALAINKIDRV-QAEVLLALSKNLNERYDFAETFMISAERGHGVDALRGWL 167
>gi|418411979|ref|ZP_12985245.1| GTPase Era [Staphylococcus epidermidis BVS058A4]
gi|410891562|gb|EKS39359.1| GTPase Era [Staphylococcus epidermidis BVS058A4]
Length = 299
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 91/175 (52%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D +RV A + ++ + +M + +V+ + D ++ ++ +
Sbjct: 63 G--IHKPKHKLGDYMMRV--AKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLNNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV + K+ EQ++ + I S L+G + L
Sbjct: 114 -KTPIFLVLNKIDLVHPDTLMPKI-EQYQSYMDFTDIIPISALEGLNVDHFIDVL 166
>gi|258626728|ref|ZP_05721550.1| GTP-binding protein [Vibrio mimicus VM603]
gi|258580984|gb|EEW05911.1| GTP-binding protein [Vibrio mimicus VM603]
Length = 324
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 77/143 (53%), Gaps = 10/143 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
EDQ V I+G PN GKS+++N ++G K++ SRK TT H ++GV T + Q DT
Sbjct: 26 EDQHCGFVAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDT 85
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PGL + + ++ + S+ S VNL VL VV H T+ D V ++ K
Sbjct: 86 PGLHIEEKRAINRLMNRAASSSLSDVNL--VLFVVEGT--HWTADDEMV---FNKLQKAN 138
Query: 255 PPKQKRVLCMNKVDLVTKKKDLL 277
P VLC+NKVD V + +++
Sbjct: 139 FPV---VLCVNKVDQVKDRNEVM 158
>gi|157803303|ref|YP_001491852.1| GTP-binding protein Era [Rickettsia canadensis str. McKiel]
gi|189037664|sp|A8EXI4.1|ERA_RICCK RecName: Full=GTPase Era
gi|157784566|gb|ABV73067.1| GTP-binding protein Era [Rickettsia canadensis str. McKiel]
Length = 295
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 92/179 (51%), Gaps = 12/179 (6%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++DTPG
Sbjct: 6 QKTVSVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILYDTPG 65
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ K K V AWS+++ +++M++ D + + + K
Sbjct: 66 IFEPKGTLE----KAMVRCAWSSLHSADLVMLIIDSLKPFDDVTHNI------LDKLCSL 115
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFK 315
V +NK+++ +K + LK H P +F S L G + L +Y+ + K
Sbjct: 116 NIVPVFLLNKIEIESKYLNNLKAFLTENH-PD-SLLFPISALSGKNIDRLLEYITSKAK 172
>gi|357634527|ref|ZP_09132405.1| GTP-binding protein Era-like-protein [Desulfovibrio sp. FW1012B]
gi|357583081|gb|EHJ48414.1| GTP-binding protein Era-like-protein [Desulfovibrio sp. FW1012B]
Length = 305
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 98/179 (54%), Gaps = 12/179 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++G NAGKS+++N ++G KV+ VS K TT + + G++T+ Q DTPGL K
Sbjct: 10 VVMLGPTNAGKSTLLNRVIGQKVSIVSPKPQTTRNSISGILTEEGAQAVFLDTPGLHRQK 69
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFD---VHRHLTSPDSRVIRLIERMGKQAPPKQ 258
G + + + SA++A+ +V++V+ D R L + ++ ++ R+ K +P
Sbjct: 70 RGIA----PLLLRSAYAALTRADVVLVLLDGAQYARRLEGLKNDLLPIV-RVLKDSP--V 122
Query: 259 KRVLCMNKVDLVTKKKDLLKV-AEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
V+ +NK D+V +K +L V A + LPG E +F S L G G+K L L + +
Sbjct: 123 PVVVALNKADVVREKARMLPVLAAVGEALPGAE-LFPVSALTGLGVKELLAALFARLPE 180
>gi|351710405|gb|EHB13324.1| GTP-binding protein era-like protein [Heterocephalus glaber]
Length = 437
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 53/225 (23%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ + + V ++GAPNAGKS++ N ++G KV VS+K +TT + LGV+T+ +TQ+ + DT
Sbjct: 109 ENPRVLHVVLLGAPNAGKSTLSNQLLGRKVFPVSKKVHTTRCQALGVITEKETQLILLDT 168
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH----RHLTSPDSRVIRLIERM 250
PG++ H +E W ++ ++++V+ DV R+ SP +V++ + +
Sbjct: 169 PGIISPAKQKRHHLELSLLEDPWKSMESADLVIVLVDVSDKWTRNQISP--QVLQCLTQF 226
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQF---------------------KHLPG- 288
Q P +L +NKVD + +K LL++ H P
Sbjct: 227 -SQVP----SILVLNKVDCLKQKAVLLELTAALTEGVVNGKKLNMKQAFHSHGGTHCPSP 281
Query: 289 --------------------YERIFMTSGLKGAGLKALTQYLMEQ 313
++ IFM S L +K L QYL+ Q
Sbjct: 282 AAKNPNTQSVRNPQRIGWPHFQEIFMLSSLSQEDVKILKQYLLAQ 326
>gi|343508970|ref|ZP_08746267.1| GTP-binding protein Era [Vibrio scophthalmi LMG 19158]
gi|342806036|gb|EGU41277.1| GTP-binding protein Era [Vibrio scophthalmi LMG 19158]
Length = 326
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 85/176 (48%), Gaps = 12/176 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+Q + I+G PN GKS+++N ++G K++ SRK TT H ++GV T+ D Q DTP
Sbjct: 29 NQHCGFIAIVGRPNVGKSTLLNNILGQKISITSRKPQTTRHRIMGVDTEGDYQAIFVDTP 88
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQA 254
GL + + ++ + S+ S VNL V F V H T+ D V + K
Sbjct: 89 GLHIEEKRAINRLMNRAANSSLSDVNL-----VFFLVDGTHWTADDEMV------LNKLR 137
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
VLC+NKVD+V + D++ L + I S G + L +++
Sbjct: 138 NANFPVVLCVNKVDVVNDRNDVMMHMADLSKLMDFVDIVPISAKHGKNVDVLRKHV 193
>gi|329770520|ref|ZP_08261898.1| GTP-binding protein Era [Gemella sanguinis M325]
gi|328836269|gb|EGF85938.1| GTP-binding protein Era [Gemella sanguinis M325]
Length = 302
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 95/186 (51%), Gaps = 15/186 (8%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
+E K+ V IIG PNAGKS+++N ++ K+A +S K TT + + GV T +D+QI D
Sbjct: 3 DEQIKTGFVTIIGRPNAGKSTLLNNILKQKIAIMSDKPQTTRNIINGVYTDSDSQIVFID 62
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG+ K HK ++ A SA+ E++ ++ + D +I +++ +
Sbjct: 63 TPGIHKPK----HKLGDYMMKLASSAIQESEIVYLIINASEKFGPGDQHLINIVKEL--- 115
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALT----QY 309
K L +NK+DL+T +K LL++ + L + I S LK + L +Y
Sbjct: 116 ---KVPTFLLINKIDLITPEK-LLEIITFYNELYDFVEIVPISALKSINVDNLLSTTKKY 171
Query: 310 LMEQFK 315
L FK
Sbjct: 172 LQPSFK 177
>gi|304310580|ref|YP_003810178.1| Small GTP-binding protein Era [gamma proteobacterium HdN1]
gi|301796313|emb|CBL44521.1| Small GTP-binding protein Era [gamma proteobacterium HdN1]
Length = 305
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++N+++G K++ SRK TT H +LG+ T Q DTPG +++
Sbjct: 17 IAIVGRPNVGKSTLLNHILGQKISITSRKPQTTRHRILGIKTDGPVQAIYVDTPG--IHR 74
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
G + + SA +V ++++ V D + T D V+ + R+ AP +
Sbjct: 75 GGEKALN-RFMNRSALESVKDVDLVLFVVDSLKW-TEGDEWVLAKLARV--SAPV----I 126
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
L +NKVD V KK LL V E + IF S L+G L L
Sbjct: 127 LVVNKVDQVEDKKRLLPVLESLGQKRDFAAIFPLSALRGKNLAEL 171
>gi|67923219|ref|ZP_00516706.1| Small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Crocosphaera watsonii WH 8501]
gi|416396075|ref|ZP_11686405.1| GTP-binding protein Era [Crocosphaera watsonii WH 0003]
gi|67854950|gb|EAM50222.1| Small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Crocosphaera watsonii WH 8501]
gi|357263020|gb|EHJ12081.1| GTP-binding protein Era [Crocosphaera watsonii WH 0003]
Length = 314
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 15/189 (7%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
V E KS VGIIG PN GKS+++N ++G K+A S + TT + + G++T QI
Sbjct: 15 VAPEGFKSGFVGIIGRPNVGKSTLMNQLIGQKIAITSPVSQTTRNRLRGILTTEKAQIIF 74
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMG 251
DTPG+ H K+ V++A +A+N +++++V D D +I L++ +
Sbjct: 75 VDTPGI----HKPHHSLGKIIVKNAKTAINAVDIILLVVDSSTKSGGGDRYIIDLLKTV- 129
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHL-PGYER-IFMTSGLKGAGLKALTQY 309
Q +L +NK D + ++ ++ E + L Y I S L G GL+ L
Sbjct: 130 -----NQPIILGLNKSD--QQPENYQEIDESYASLIQDYNWPILKFSALTGDGLENLQNS 182
Query: 310 LMEQFKDLG 318
L+EQ D G
Sbjct: 183 LIEQL-DFG 190
>gi|407793340|ref|ZP_11140374.1| GTPase Era [Idiomarina xiamenensis 10-D-4]
gi|407214963|gb|EKE84804.1| GTPase Era [Idiomarina xiamenensis 10-D-4]
Length = 307
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 20/179 (11%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N ++G K++ S+K TT H +LG+ T D Q DTPGL
Sbjct: 18 VAIVGRPNVGKSTLLNRILGQKISITSKKPQTTRHRILGIDTDGDYQTVYVDTPGL---- 73
Query: 202 SGYSHKDVKVRV-----ESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
H++ K + ++A SA+N ++++ V + R L S D V +E++ K P
Sbjct: 74 ----HQEEKRAINRLMNQTASSAINDVDLILFVVENTRWL-SDDELV---LEKLKKARVP 125
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFK 315
VL +NKVD + K LL ++ + I S +G L+ L Q + K
Sbjct: 126 A---VLLVNKVDQIKHKDQLLPHLQKLNEHMQFADIIPISATQGDNLERLQQVIRGHLK 181
>gi|262166501|ref|ZP_06034238.1| GTP-binding protein Era [Vibrio mimicus VM223]
gi|262026217|gb|EEY44885.1| GTP-binding protein Era [Vibrio mimicus VM223]
Length = 324
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 77/143 (53%), Gaps = 10/143 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
EDQ V I+G PN GKS+++N ++G K++ SRK TT H ++GV T + Q DT
Sbjct: 26 EDQHCGFVAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDT 85
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PGL + + ++ + S+ S VNL VL VV H T+ D V ++ K
Sbjct: 86 PGLHIEEKRAINRLMNRAASSSLSDVNL--VLFVVEGT--HWTADDEMV---FNKLQKAN 138
Query: 255 PPKQKRVLCMNKVDLVTKKKDLL 277
P VLC+NKVD V + +++
Sbjct: 139 FPV---VLCVNKVDQVKDRNEVM 158
>gi|384135808|ref|YP_005518522.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339289893|gb|AEJ44003.1| GTP-binding protein Era [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 298
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 92/173 (53%), Gaps = 10/173 (5%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V +IG PN GKS+++N +VG KVA +S + TT + + GV T +Q+ DTPG+
Sbjct: 4 KSGFVALIGRPNVGKSTLLNALVGHKVAIMSSRPQTTRNRIRGVRTTETSQMIFIDTPGI 63
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K H+ + V++A +N +V+++V D + + + + +ER+ +
Sbjct: 64 HKPK----HRLGEYMVDAALKTLNEVDVIVMVVDASSPVHPTEHEIAKQLERV------R 113
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+L +NKVD + + +LK E+++ L ++ S L+G + L + +
Sbjct: 114 TPVILALNKVDALEDRALVLKRIEEYQALRPFDEYVPISALRGEQVDLLAEII 166
>gi|332686714|ref|YP_004456488.1| GTP-binding protein Era [Melissococcus plutonius ATCC 35311]
gi|332370723|dbj|BAK21679.1| GTP-binding protein Era [Melissococcus plutonius ATCC 35311]
Length = 300
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 11/181 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
E++ KS + IIG PN GKS+++N +VG KVA +S K TT +++ G+ T Q+ D
Sbjct: 2 EKEHKSGFIAIIGRPNVGKSTLLNRIVGQKVAIMSDKAQTTRNKIQGIYTTQKAQLIFID 61
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG+ K H+ VE+A+SA+ + + + + D +I ++ M Q
Sbjct: 62 TPGIHKPK----HRLGDFMVETAYSALREVDATLFMISADQKRGKGDDFIIERLKEM--Q 115
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
P L +NK+D + DLL + E + ++ I S +G L L+EQ
Sbjct: 116 NPV----YLVINKIDKI-HPDDLLGIIEDYSQQMTFKEIIPISATEGNNFDHLMDVLVEQ 170
Query: 314 F 314
Sbjct: 171 M 171
>gi|67459566|ref|YP_247190.1| GTP-binding protein Era [Rickettsia felis URRWXCal2]
gi|75536034|sp|Q4UKB0.1|ERA_RICFE RecName: Full=GTPase Era
gi|67005099|gb|AAY62025.1| GTP-binding protein Era [Rickettsia felis URRWXCal2]
Length = 293
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 12/174 (6%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QK+++ IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++DTPG
Sbjct: 4 QKTISFCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILYDTPG 63
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ K K V AWS+++ +++M++ D + P V+ I + K
Sbjct: 64 IFEPKGTLE----KAMVRCAWSSLHSADLVMLIIDSLK----PFDDVMHDI--LDKLRSL 113
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ +NK+D+ +K D +K H P +F S L G + L +Y+
Sbjct: 114 NIVPIFLLNKIDIESKYLDDIKAFLTENH-PD-SLLFPISALSGKNIDGLLEYI 165
>gi|221068687|ref|ZP_03544792.1| GTP-binding protein Era [Comamonas testosteroni KF-1]
gi|220713710|gb|EED69078.1| GTP-binding protein Era [Comamonas testosteroni KF-1]
Length = 367
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 14/156 (8%)
Query: 124 RQEEEEEEVK---EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLG 180
R +EEE + E+Q+ + I+G PN GKS+++N +VG K++ SRK TT H + G
Sbjct: 56 RDQEEEAPARVYAPEEQRCGLIAIVGKPNVGKSTLMNALVGQKISITSRKAQTTRHRITG 115
Query: 181 VMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPD 240
+ TK +TQ DTPG S +K + V A V+L +L VV T D
Sbjct: 116 IRTKDETQFVFVDTPGFQTKHSTALNKSLNKTVMGAIGDVDL--ILFVV--EAGSFTLAD 171
Query: 241 SRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDL 276
++V+ L + P +L NK+D V ++ ++
Sbjct: 172 AKVLSLFK-------PGIPTLLIANKLDTVGRRAEI 200
>gi|417897108|ref|ZP_12541051.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21235]
gi|341840374|gb|EGS81894.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21235]
Length = 299
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 89/175 (50%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K HK ++ A + ++ + +M + + + + D +I ++E +
Sbjct: 63 GIHKPK----HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLENV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV +L+ E+++ + I S L+G + L
Sbjct: 114 -KTPVFLVLNKIDLV-HPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVL 166
>gi|215482646|ref|YP_002324840.1| GTP-binding protein Era [Acinetobacter baumannii AB307-0294]
gi|213986558|gb|ACJ56857.1| GTP-binding protein Era [Acinetobacter baumannii AB307-0294]
Length = 301
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 90/169 (53%), Gaps = 10/169 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ Q DTPG+ +
Sbjct: 1 MAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTPGMHKKE 60
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+K + SA VNL ++ V D H+ + D ++E++ P +
Sbjct: 61 VRAINKMMNRAAHSALRDVNL---VLFVIDAHKWTQNDD----LVLEKLKNADMPV---I 110
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK D K+++L + ++ L + I S L+GA L+ L++ +
Sbjct: 111 LVINKADTFGDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETI 159
>gi|372489095|ref|YP_005028660.1| GTP-binding protein Era [Dechlorosoma suillum PS]
gi|359355648|gb|AEV26819.1| GTP-binding protein Era [Dechlorosoma suillum PS]
Length = 297
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 15/181 (8%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
E+ +S V I+G PN GKS+++N +VG K++ VSRK TT H + G++T D Q D
Sbjct: 4 EKQIRSGYVAIVGRPNVGKSTLLNRLVGEKISIVSRKAQTTRHRITGILTNDDAQFVFVD 63
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG + ++ + V + V+ V++ V + R + D V++L+
Sbjct: 64 TPGFQTEHTNALNRAMNRGVTQTLADVD---VVLFVVEAGR-FDAKDKAVLKLL------ 113
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALT----QY 309
P + +L +NKVD + +K+ LL + + S KG L+ L QY
Sbjct: 114 -PEDRPVILVVNKVDKIAEKEKLLPFLAAVTAERSFTAVVPVSATKGKQLEQLLAEARQY 172
Query: 310 L 310
L
Sbjct: 173 L 173
>gi|264677119|ref|YP_003277025.1| GTP-binding protein Era [Comamonas testosteroni CNB-2]
gi|299530660|ref|ZP_07044075.1| GTP-binding protein Era [Comamonas testosteroni S44]
gi|262207631|gb|ACY31729.1| GTP-binding protein Era [Comamonas testosteroni CNB-2]
gi|298721176|gb|EFI62118.1| GTP-binding protein Era [Comamonas testosteroni S44]
Length = 367
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 14/156 (8%)
Query: 124 RQEEEEEEVK---EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLG 180
R +EEE + E+Q+ + I+G PN GKS+++N +VG K++ SRK TT H + G
Sbjct: 56 RDQEEEAPARVYAPEEQRCGLIAIVGKPNVGKSTLMNALVGQKISITSRKAQTTRHRITG 115
Query: 181 VMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPD 240
+ TK +TQ DTPG S +K + V A V+L +L VV T D
Sbjct: 116 IRTKDETQFVFVDTPGFQTKHSTALNKSLNKTVMGAIGDVDL--ILFVV--EAGSFTLAD 171
Query: 241 SRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDL 276
++V+ L + P +L NK+D V ++ ++
Sbjct: 172 AKVLSLFK-------PGIPTLLIANKLDTVGRRAEI 200
>gi|300860627|ref|ZP_07106714.1| GTP-binding protein Era [Enterococcus faecalis TUSoD Ef11]
gi|300849666|gb|EFK77416.1| GTP-binding protein Era [Enterococcus faecalis TUSoD Ef11]
Length = 300
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V I+G PN GKS+++N +VG K+A +S K TT +++ G+ T + QI DTP
Sbjct: 4 EHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTIPEAQIVFIDTP 63
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K H+ VESA++A+ + + + + D + IER+
Sbjct: 64 GIHKPK----HRLGDFMVESAYNAMREVDATLFMVSADQKRGKGDGFI---IERLKNNNS 116
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
P L +NK+D V DLL + E + ++ I S +G + L L+EQ
Sbjct: 117 PV---YLIINKIDKV-HPDDLLSIIEDYSKQMDFKEIIPISATEGNNFEHLMDVLVEQM 171
>gi|59712693|ref|YP_205469.1| GTP-binding protein Era [Vibrio fischeri ES114]
gi|59480794|gb|AAW86581.1| membrane-associated, 16S rRNA-binding GTPase [Vibrio fischeri
ES114]
Length = 321
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 11/151 (7%)
Query: 127 EEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKAD 186
E++ EV + +Q + I+G PN GKS+++N ++G K++ SRK TT H ++GV T D
Sbjct: 16 EKKSEVSD-NQHCGFIAIVGRPNVGKSTLLNQILGQKISITSRKPQTTRHRIMGVDTDGD 74
Query: 187 TQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRL 246
Q DTPGL + + ++ + S+ S VNL VL +V H +PD ++
Sbjct: 75 YQAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNL--VLFLVDGTH---WTPDDEMV-- 127
Query: 247 IERMGKQAPPKQKRVLCMNKVDLVTKKKDLL 277
+ ++ K P VL +NKVD V KKD++
Sbjct: 128 LNKLKKSEFPT---VLLVNKVDNVKDKKDVM 155
>gi|392949010|ref|ZP_10314609.1| ribosome biogenesis GTPase, Era subfamily [Lactobacillus pentosus
KCA1]
gi|334880401|emb|CCB81131.1| GTP-binding protein era homolog [Lactobacillus pentosus MP-10]
gi|339638996|emb|CCC18202.1| GTPase Era [Lactobacillus pentosus IG1]
gi|392435829|gb|EIW13754.1| ribosome biogenesis GTPase, Era subfamily [Lactobacillus pentosus
KCA1]
Length = 302
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 11/173 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIG PN GKS+++N +VG KVA +S K TT + + G+ T ADTQ+ DTPG+
Sbjct: 12 VAIIGRPNVGKSTLLNRVVGQKVAIMSDKAQTTRNRIQGIYTTADTQMVFIDTPGIHKPH 71
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S V+SA S + + ++ + + + D+ +I ++ + KQ
Sbjct: 72 SRLG----DFMVKSALSTLGEVDAVLFMINADERRGAGDNFIIDRLKNV------KQPIY 121
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+D V LL++ +Q+K ++ ++ S L+G + L L +Q
Sbjct: 122 LVINKIDQV-HPDHLLEIMDQYKDALPWKEVYPISALEGNNVDELLATLKKQL 173
>gi|315038512|ref|YP_004032080.1| GTP-binding protein Era [Lactobacillus amylovorus GRL 1112]
gi|312276645|gb|ADQ59285.1| GTP-binding protein Era [Lactobacillus amylovorus GRL 1112]
Length = 301
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 94/186 (50%), Gaps = 18/186 (9%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
++E+ KS V ++G PN GKS+++NY+VG KVA S K TT + + G+ T D QI
Sbjct: 1 MEEKKFKSGFVALVGRPNVGKSTLMNYLVGQKVAITSNKPQTTRNRISGIYTSDDMQIVF 60
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERM 250
DTPG+ H + ++ A S +L +V +V+F V + D + L++ +
Sbjct: 61 VDTPGIF-----KPHSKLDDYMDKA-SLSSLNDVDLVLFMVEPEKIGKGDQYIADLLKEV 114
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKAL 306
K L +NKVD + K LL + + + L G++ I S +G G L L
Sbjct: 115 ------KVPVFLVINKVDQIHPNK-LLPIMDSYHKLEGFKEILPISATQGIGIEDLLATL 167
Query: 307 TQYLME 312
+YL E
Sbjct: 168 NKYLPE 173
>gi|220934267|ref|YP_002513166.1| GTP-binding protein Era [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219995577|gb|ACL72179.1| GTP-binding protein Era [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 281
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 91/161 (56%), Gaps = 11/161 (6%)
Query: 151 GKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDV- 209
GKS+++N +VG K+AA +RK TT H +LG++T+ Q+ + DTPG+ S K +
Sbjct: 2 GKSTLLNALVGEKIAATTRKPQTTRHRILGIVTRGADQLILVDTPGI----DTRSEKLLG 57
Query: 210 KVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDL 269
+V ++A + + ++ V + R S D++++ ++ KQA K K VL +NKVD
Sbjct: 58 RVLNQAAQAVFADTDAVLFVVEADRW-ESGDAQILEML----KQAGVK-KLVLAINKVDR 111
Query: 270 VTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ +K+ LL E+ + L + I SGL+G L+ L L
Sbjct: 112 LERKEALLPFIERLQGLHAFSDIVPISGLRGVNLEPLVDVL 152
>gi|418530633|ref|ZP_13096556.1| GTPase Era [Comamonas testosteroni ATCC 11996]
gi|371452352|gb|EHN65381.1| GTPase Era [Comamonas testosteroni ATCC 11996]
Length = 367
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 14/156 (8%)
Query: 124 RQEEEEEEVK---EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLG 180
R +EEE + E+Q+ + I+G PN GKS+++N +VG K++ SRK TT H + G
Sbjct: 56 RDQEEEAPARVYAPEEQRCGLIAIVGKPNVGKSTLMNALVGQKISITSRKAQTTRHRITG 115
Query: 181 VMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPD 240
+ TK +TQ DTPG S +K + V A V+L +L VV T D
Sbjct: 116 IRTKDETQFVFVDTPGFQTKHSTALNKSLNKTVMGAIGDVDL--ILFVV--EAGSFTLAD 171
Query: 241 SRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDL 276
++V+ L + P +L NK+D V ++ ++
Sbjct: 172 AKVLSLFK-------PGIPTLLIANKLDTVGRRAEI 200
>gi|225849583|ref|YP_002729817.1| GTP-binding protein EngA [Persephonella marina EX-H1]
gi|254783162|sp|C0QT02.1|DER_PERMH RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|225645742|gb|ACO03928.1| ribosome-associated GTPase EngA [Persephonella marina EX-H1]
Length = 447
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 15/209 (7%)
Query: 113 LAKALLQAALERQEEEEEEVKEEDQKS--VAVGIIGAPNAGKSSIINYMVGTKVAAVSRK 170
L A++Q E + E +EV E+++KS + V I+G PNAGKSS++N ++G + A VS
Sbjct: 154 LLDAVVQDIPEYEREASKEVGEKEEKSDVIKVAIVGKPNAGKSSLLNAILGEERAVVSEI 213
Query: 171 TNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVF 230
TT V + D + DT GL KS + + A+ +V++ V
Sbjct: 214 PGTTRDVVDTLFEWKDQKFLFLDTAGLR-KKSKVDYGIEFFSIGRTLDAIKKADVIVHVI 272
Query: 231 DVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLL-----KVAEQFKH 285
D + T D+++ LI++ K A V+ +NK+D V K ++L +V E+
Sbjct: 273 DAQQGATEQDTKIAHLIQKYTKPA------VIVINKIDTVPPKSEVLNRIKNQVRERLYF 326
Query: 286 LPGYERIFMTSGLKGAGLKALTQYLMEQF 314
+P Y I MTS G+K L + + + +
Sbjct: 327 IP-YAPIVMTSAKNRKGIKQLLKEITDVY 354
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 14/171 (8%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKSS+ N ++G + A V T ++ + DT G + +
Sbjct: 4 VAIVGRPNVGKSSLFNRIIGKRKAIVEDIPGVTRDRIVSTAEWRGVTFEVVDTGGYIESD 63
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
++ ++E + L + ++V D LT D + R++ R K
Sbjct: 64 KDTFAPYIRKQIE---KELELSDAFILVVDGKEGLTPADKEIARILHRTDKPV------Y 114
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
+ +NK+D ++ K +F L G+E++F S ++ G+ L +++
Sbjct: 115 VAVNKID----NPEMEKAIYEFYEL-GFEKVFPVSSIQKYGVADLLDAVVQ 160
>gi|74318103|ref|YP_315843.1| GTPase [Thiobacillus denitrificans ATCC 25259]
gi|74057598|gb|AAZ98038.1| GTPase [Thiobacillus denitrificans ATCC 25259]
Length = 297
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N +VG KV+ SRK TT H V+G+ T Q DTPG
Sbjct: 12 VAIVGRPNVGKSTLLNRLVGQKVSITSRKAQTTRHRVMGIHTTDRAQFVFVDTPGFQTRH 71
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ ++ + RV S + V+M++ + R LT D +V+ L+ P + +
Sbjct: 72 TSTMNRAMNKRVRETLSDTD---VVMMLVEAGR-LTREDRQVMELL-------PKDRPLL 120
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NKVD + L+ +Q + I S +G+ L L + L
Sbjct: 121 LVVNKVDQAKDRAALMAYLQQVAAAHAFTEIVPVSAKQGSNLDELLKTL 169
>gi|87118655|ref|ZP_01074554.1| GTP-binding protein Era [Marinomonas sp. MED121]
gi|86166289|gb|EAQ67555.1| GTP-binding protein Era [Marinomonas sp. MED121]
Length = 348
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 88/165 (53%), Gaps = 10/165 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N+++G K++ SRK TT ++LGV ++ Q DTPG+ L +
Sbjct: 60 VAIVGRPNVGKSTLLNHVLGQKLSITSRKPQTTRQQILGVKSQGHVQTIYVDTPGMHLGE 119
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ ++ + ++A SA+ + ++ V D R T D V +E++ P V
Sbjct: 120 AKAINRFMN---KTASSALADVDAILFVIDAER-WTQEDQSV---LEKVKLARCPV---V 169
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
L +NKVD + +K +LL + L + +I S L+G L L
Sbjct: 170 LVVNKVDKLEEKDNLLPTLAKLSELMNFAQIVPISALRGKNLDRL 214
>gi|119944413|ref|YP_942093.1| GTP-binding protein Era [Psychromonas ingrahamii 37]
gi|119863017|gb|ABM02494.1| GTP-binding protein Era [Psychromonas ingrahamii 37]
Length = 300
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 12/177 (6%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QK V I+G PN GKS++IN ++G KV+ SRK TT H +LG+ T+ D Q DTPG
Sbjct: 3 QKCGLVAIVGRPNVGKSTLINALLGQKVSITSRKAQTTRHRILGIDTEGDYQTIFVDTPG 62
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAP 255
L + + ++ + +A S++N +V MV+F V H D V+ + +
Sbjct: 63 LHIEEKRAINRLMN---RAASSSIN--DVEMVIFVVEGTHWNEDDDMVLSKFKYL----- 112
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
K VL +NK+D V K+ LL E ++ I S KG ++ + + E
Sbjct: 113 -KCPVVLAVNKIDNVEDKELLLPHLEALGKRYNFKHILPMSAKKGDNIEKIRTWAKE 168
>gi|389774796|ref|ZP_10192915.1| GTPase Era [Rhodanobacter spathiphylli B39]
gi|388438395|gb|EIL95150.1| GTPase Era [Rhodanobacter spathiphylli B39]
Length = 310
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 10/180 (5%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
+D + V + G PN GKS+++N ++G +++ +S + TT H +LG+ T QI DT
Sbjct: 15 DDFRCGTVALAGRPNVGKSTLLNALIGFRLSIISPRPQTTRHRILGINTSEAGQIMYVDT 74
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PGL ++ + SA S V+L ++ V + R ++ L+E Q+
Sbjct: 75 PGLHRGAKRAMNRSLNRAARSAISDVDL---VVQVIEAGRFTDEDEALYAALVE----QS 127
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
P R+L +NKVDL K +L Y+ I S LK GLK L Q ++++
Sbjct: 128 SP---RLLVINKVDLNKDKTVMLPFVSGLVATHSYDEIHYISALKKQGLKELEQAILKRL 184
>gi|229545169|ref|ZP_04433894.1| GTP-binding protein Era [Enterococcus faecalis TX1322]
gi|229309714|gb|EEN75701.1| GTP-binding protein Era [Enterococcus faecalis TX1322]
Length = 300
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V I+G PN GKS+++N +VG K+A +S K TT +++ G+ T + QI DTP
Sbjct: 4 EHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTIPEAQIVFIDTP 63
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K H+ VESA++A+ + + + + D + IER+
Sbjct: 64 GIHKPK----HRLGDFMVESAYNAMREVDATLFMVSADQKRGKGDDFI---IERLKNNNS 116
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
P L +NK+D V DLL + E + ++ I S +G + L L+EQ
Sbjct: 117 PV---YLIINKIDKV-HPDDLLSIIEDYSKQMDFKEIIPISATEGNNFEHLMDVLVEQM 171
>gi|452944616|ref|YP_007500781.1| GTP-binding protein Era [Hydrogenobaculum sp. HO]
gi|452883034|gb|AGG15738.1| GTP-binding protein Era [Hydrogenobaculum sp. HO]
Length = 298
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 93/178 (52%), Gaps = 16/178 (8%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PNAGKSS++N ++G KV+ VS TT V+GV D QI DTPG M
Sbjct: 6 VSIVGKPNAGKSSLLNAILGKKVSIVSNVAGTTRIRVMGVKNLEDAQIIFVDTPGFM--- 62
Query: 202 SGYSHKDV--KVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQK 259
KD+ + V++A ++ +VL+ V D +T D + ++++R +K
Sbjct: 63 --KRPKDLMEEYMVKAAKESLEDVDVLLFVLDAKTGITEEDLNLFKILKR----DYSDKK 116
Query: 260 RVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYLMEQ 313
+ +NK+D ++K++ +L++ E+ + E I S K LK + +YL EQ
Sbjct: 117 IIGVLNKIDSISKEQ-VLELIEEVSKIFALEEIVPVSATKNTNIDELLKTIVKYLPEQ 173
>gi|262375525|ref|ZP_06068758.1| GTP-binding protein Era [Acinetobacter lwoffii SH145]
gi|262309779|gb|EEY90909.1| GTP-binding protein Era [Acinetobacter lwoffii SH145]
Length = 342
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 90/171 (52%), Gaps = 10/171 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D +S V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ +Q DTP
Sbjct: 36 DYRSGFVAIVGRPNVGKSTLMNHILGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL V+F V +P+ ++ +E++
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNL-----VLFVVDAQKWTPNDDLV--LEKLKNAEM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
P +L +NK+D K + L + + + L + I S L+GA L+ L
Sbjct: 149 PV---ILVINKLDTFENKNEALPLIREREKLMNFAEIVPVSALRGANLEHL 196
>gi|237746715|ref|ZP_04577195.1| GTP-binding protein Era [Oxalobacter formigenes HOxBLS]
gi|229378066|gb|EEO28157.1| GTP-binding protein Era [Oxalobacter formigenes HOxBLS]
Length = 299
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++N ++G KV+ SRK TT H ++G+ T D Q DTPG
Sbjct: 14 IAIVGRPNVGKSTLMNELIGAKVSITSRKAQTTRHRIMGIQTDDDAQFIYIDTPGFQTRY 73
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ +K++ V S + V++ V D + D +V+ LI P +
Sbjct: 74 NNALNKNLNRTVRDTLSTAD---VILFVVDAGVY-GQADQQVLDLI-------PENVPTI 122
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSG 297
L +NK D V +K +L+ AE+ L + I S
Sbjct: 123 LVVNKTDKVKEKAELIPFAEKLAALRDFAAIVPVSA 158
>gi|254507481|ref|ZP_05119615.1| GTP-binding protein Era [Vibrio parahaemolyticus 16]
gi|219549551|gb|EED26542.1| GTP-binding protein Era [Vibrio parahaemolyticus 16]
Length = 325
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 78/144 (54%), Gaps = 12/144 (8%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+Q V I+G PN GKS+++N ++G K++ SRK TT H ++GV T+ D Q DT
Sbjct: 27 ENQHCGFVAIVGRPNVGKSTLLNRILGQKISITSRKPQTTRHRIMGVDTEGDYQAIYVDT 86
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQ 253
PGL + + ++ + S+ S VNL V F V H T+ D V + ++ K
Sbjct: 87 PGLHIEEKRAINRLMNRAANSSLSDVNL-----VFFLVDGTHWTADDEMV---LTKLQKS 138
Query: 254 APPKQKRVLCMNKVDLVTKKKDLL 277
P VLC+NKVD V + D++
Sbjct: 139 NFPV---VLCVNKVDNVQDRNDVM 159
>gi|343503693|ref|ZP_08741502.1| GTP-binding protein Era [Vibrio ichthyoenteri ATCC 700023]
gi|342814285|gb|EGU49232.1| GTP-binding protein Era [Vibrio ichthyoenteri ATCC 700023]
Length = 326
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 85/176 (48%), Gaps = 12/176 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+Q + I+G PN GKS+++N ++G K++ SRK TT H ++GV T+ D Q DTP
Sbjct: 29 NQHCGFIAIVGRPNVGKSTLLNNILGQKISITSRKPQTTRHRIMGVDTEGDYQAIFVDTP 88
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQA 254
GL + + ++ + S+ S VNL V F V H T+ D V + K
Sbjct: 89 GLHIEEKRAINRLMNRAANSSLSDVNL-----VFFLVDGTHWTADDEMV------LNKLR 137
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
VLC+NKVD+V + D++ L + I S G + L +++
Sbjct: 138 NANFPVVLCVNKVDVVNDRNDVMLHMADLSKLMDFVDIVPISAKHGKNVDVLRKHV 193
>gi|29376905|ref|NP_816059.1| GTP-binding protein Era [Enterococcus faecalis V583]
gi|227519872|ref|ZP_03949921.1| GTP-binding protein Era [Enterococcus faecalis TX0104]
gi|227553941|ref|ZP_03983988.1| GTP-binding protein Era [Enterococcus faecalis HH22]
gi|229549418|ref|ZP_04438143.1| GTP-binding protein Era [Enterococcus faecalis ATCC 29200]
gi|255975189|ref|ZP_05425775.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis T2]
gi|256617033|ref|ZP_05473879.1| GTP-binding protein Era [Enterococcus faecalis ATCC 4200]
gi|256763103|ref|ZP_05503683.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis T3]
gi|256853771|ref|ZP_05559136.1| GTP-binding protein Era [Enterococcus faecalis T8]
gi|256956687|ref|ZP_05560858.1| GTP-binding protein Era [Enterococcus faecalis DS5]
gi|256961296|ref|ZP_05565467.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis Merz96]
gi|256963577|ref|ZP_05567748.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis HIP11704]
gi|257079642|ref|ZP_05574003.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis JH1]
gi|257082012|ref|ZP_05576373.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis E1Sol]
gi|257084563|ref|ZP_05578924.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis Fly1]
gi|257087441|ref|ZP_05581802.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis D6]
gi|257090600|ref|ZP_05584961.1| small GTP-binding protein [Enterococcus faecalis CH188]
gi|257416648|ref|ZP_05593642.1| GTP-binding protein Era [Enterococcus faecalis ARO1/DG]
gi|257419864|ref|ZP_05596858.1| small GTP-binding protein Era [Enterococcus faecalis T11]
gi|257421948|ref|ZP_05598938.1| GTP-binding protein Era [Enterococcus faecalis X98]
gi|293383580|ref|ZP_06629490.1| GTP-binding protein Era [Enterococcus faecalis R712]
gi|293387307|ref|ZP_06631863.1| GTP-binding protein Era [Enterococcus faecalis S613]
gi|294780922|ref|ZP_06746276.1| GTP-binding protein Era [Enterococcus faecalis PC1.1]
gi|307270833|ref|ZP_07552121.1| GTP-binding protein Era [Enterococcus faecalis TX4248]
gi|307271516|ref|ZP_07552788.1| GTP-binding protein Era [Enterococcus faecalis TX0855]
gi|307277156|ref|ZP_07558260.1| GTP-binding protein Era [Enterococcus faecalis TX2134]
gi|307285808|ref|ZP_07565942.1| GTP-binding protein Era [Enterococcus faecalis TX0860]
gi|307287711|ref|ZP_07567754.1| GTP-binding protein Era [Enterococcus faecalis TX0109]
gi|307290538|ref|ZP_07570450.1| GTP-binding protein Era [Enterococcus faecalis TX0411]
gi|312899839|ref|ZP_07759158.1| GTP-binding protein Era [Enterococcus faecalis TX0470]
gi|312905132|ref|ZP_07764253.1| GTP-binding protein Era [Enterococcus faecalis TX0635]
gi|312906130|ref|ZP_07765142.1| GTP-binding protein Era [Enterococcus faecalis DAPTO 512]
gi|312909476|ref|ZP_07768331.1| GTP-binding protein Era [Enterococcus faecalis DAPTO 516]
gi|312953489|ref|ZP_07772329.1| GTP-binding protein Era [Enterococcus faecalis TX0102]
gi|384513806|ref|YP_005708899.1| GTP-binding protein Era [Enterococcus faecalis OG1RF]
gi|384519266|ref|YP_005706571.1| GTP-binding protein Era [Enterococcus faecalis 62]
gi|397700599|ref|YP_006538387.1| GTP-binding protein Era [Enterococcus faecalis D32]
gi|421513047|ref|ZP_15959835.1| GTP-binding protein Era [Enterococcus faecalis ATCC 29212]
gi|422685105|ref|ZP_16743330.1| GTP-binding protein Era [Enterococcus faecalis TX4000]
gi|422687890|ref|ZP_16746061.1| GTP-binding protein Era [Enterococcus faecalis TX0630]
gi|422693246|ref|ZP_16751260.1| GTP-binding protein Era [Enterococcus faecalis TX0031]
gi|422695915|ref|ZP_16753893.1| GTP-binding protein Era [Enterococcus faecalis TX4244]
gi|422697838|ref|ZP_16755769.1| GTP-binding protein Era [Enterococcus faecalis TX1346]
gi|422701351|ref|ZP_16759192.1| GTP-binding protein Era [Enterococcus faecalis TX1342]
gi|422703689|ref|ZP_16761509.1| GTP-binding protein Era [Enterococcus faecalis TX1302]
gi|422706985|ref|ZP_16764682.1| GTP-binding protein Era [Enterococcus faecalis TX0043]
gi|422709889|ref|ZP_16767235.1| GTP-binding protein Era [Enterococcus faecalis TX0027]
gi|422714953|ref|ZP_16771677.1| GTP-binding protein Era [Enterococcus faecalis TX0309A]
gi|422717369|ref|ZP_16774054.1| GTP-binding protein Era [Enterococcus faecalis TX0309B]
gi|422719864|ref|ZP_16776487.1| GTP-binding protein Era [Enterococcus faecalis TX0017]
gi|422724756|ref|ZP_16781232.1| GTP-binding protein Era [Enterococcus faecalis TX2137]
gi|422725961|ref|ZP_16782418.1| GTP-binding protein Era [Enterococcus faecalis TX0312]
gi|422729550|ref|ZP_16785951.1| GTP-binding protein Era [Enterococcus faecalis TX0012]
gi|422732311|ref|ZP_16788651.1| GTP-binding protein Era [Enterococcus faecalis TX0645]
gi|422736788|ref|ZP_16793050.1| GTP-binding protein Era [Enterococcus faecalis TX1341]
gi|422739371|ref|ZP_16794552.1| GTP-binding protein Era [Enterococcus faecalis TX2141]
gi|424675672|ref|ZP_18112569.1| ribosome biogenesis GTPase Era [Enterococcus faecalis 599]
gi|424676229|ref|ZP_18113106.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV103]
gi|424680596|ref|ZP_18117399.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV116]
gi|424683114|ref|ZP_18119868.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV129]
gi|424686680|ref|ZP_18123346.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV25]
gi|424689554|ref|ZP_18126125.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV31]
gi|424694086|ref|ZP_18130495.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV37]
gi|424697665|ref|ZP_18133987.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV41]
gi|424700161|ref|ZP_18136359.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV62]
gi|424702997|ref|ZP_18139134.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV63]
gi|424710176|ref|ZP_18143642.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV65]
gi|424717864|ref|ZP_18147138.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV68]
gi|424721089|ref|ZP_18150187.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV72]
gi|424725055|ref|ZP_18153982.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV73]
gi|424727291|ref|ZP_18155924.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV81]
gi|424742080|ref|ZP_18170414.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV85]
gi|424751211|ref|ZP_18179243.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV93]
gi|424760585|ref|ZP_18188197.1| ribosome biogenesis GTPase Era [Enterococcus faecalis R508]
gi|428767617|ref|YP_007153728.1| GTP-binding protein era homolog [Enterococcus faecalis str.
Symbioflor 1]
gi|430359665|ref|ZP_19425917.1| GTP-binding protein Era [Enterococcus faecalis OG1X]
gi|430370086|ref|ZP_19428885.1| GTP-binding protein Era [Enterococcus faecalis M7]
gi|81436511|sp|Q831T9.1|ERA_ENTFA RecName: Full=GTPase Era
gi|29344370|gb|AAO82129.1| GTP-binding protein Era [Enterococcus faecalis V583]
gi|227072666|gb|EEI10629.1| GTP-binding protein Era [Enterococcus faecalis TX0104]
gi|227176927|gb|EEI57899.1| GTP-binding protein Era [Enterococcus faecalis HH22]
gi|229305655|gb|EEN71651.1| GTP-binding protein Era [Enterococcus faecalis ATCC 29200]
gi|255968061|gb|EET98683.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis T2]
gi|256596560|gb|EEU15736.1| GTP-binding protein Era [Enterococcus faecalis ATCC 4200]
gi|256684354|gb|EEU24049.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis T3]
gi|256710714|gb|EEU25757.1| GTP-binding protein Era [Enterococcus faecalis T8]
gi|256947183|gb|EEU63815.1| GTP-binding protein Era [Enterococcus faecalis DS5]
gi|256951792|gb|EEU68424.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis Merz96]
gi|256954073|gb|EEU70705.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis HIP11704]
gi|256987672|gb|EEU74974.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis JH1]
gi|256990042|gb|EEU77344.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis E1Sol]
gi|256992593|gb|EEU79895.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis Fly1]
gi|256995471|gb|EEU82773.1| small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Enterococcus faecalis D6]
gi|256999412|gb|EEU85932.1| small GTP-binding protein [Enterococcus faecalis CH188]
gi|257158476|gb|EEU88436.1| GTP-binding protein Era [Enterococcus faecalis ARO1/DG]
gi|257161692|gb|EEU91652.1| small GTP-binding protein Era [Enterococcus faecalis T11]
gi|257163772|gb|EEU93732.1| GTP-binding protein Era [Enterococcus faecalis X98]
gi|291079092|gb|EFE16456.1| GTP-binding protein Era [Enterococcus faecalis R712]
gi|291083205|gb|EFE20168.1| GTP-binding protein Era [Enterococcus faecalis S613]
gi|294452048|gb|EFG20496.1| GTP-binding protein Era [Enterococcus faecalis PC1.1]
gi|295113464|emb|CBL32101.1| GTP-binding protein Era [Enterococcus sp. 7L76]
gi|306498393|gb|EFM67898.1| GTP-binding protein Era [Enterococcus faecalis TX0411]
gi|306501449|gb|EFM70752.1| GTP-binding protein Era [Enterococcus faecalis TX0109]
gi|306502569|gb|EFM71836.1| GTP-binding protein Era [Enterococcus faecalis TX0860]
gi|306506086|gb|EFM75252.1| GTP-binding protein Era [Enterococcus faecalis TX2134]
gi|306511788|gb|EFM80786.1| GTP-binding protein Era [Enterococcus faecalis TX0855]
gi|306512834|gb|EFM81478.1| GTP-binding protein Era [Enterococcus faecalis TX4248]
gi|310627776|gb|EFQ11059.1| GTP-binding protein Era [Enterococcus faecalis DAPTO 512]
gi|310628698|gb|EFQ11981.1| GTP-binding protein Era [Enterococcus faecalis TX0102]
gi|310631522|gb|EFQ14805.1| GTP-binding protein Era [Enterococcus faecalis TX0635]
gi|311290149|gb|EFQ68705.1| GTP-binding protein Era [Enterococcus faecalis DAPTO 516]
gi|311293089|gb|EFQ71645.1| GTP-binding protein Era [Enterococcus faecalis TX0470]
gi|315025403|gb|EFT37335.1| GTP-binding protein Era [Enterococcus faecalis TX2137]
gi|315030211|gb|EFT42143.1| GTP-binding protein Era [Enterococcus faecalis TX4000]
gi|315032903|gb|EFT44835.1| GTP-binding protein Era [Enterococcus faecalis TX0017]
gi|315035613|gb|EFT47545.1| GTP-binding protein Era [Enterococcus faecalis TX0027]
gi|315144805|gb|EFT88821.1| GTP-binding protein Era [Enterococcus faecalis TX2141]
gi|315146685|gb|EFT90701.1| GTP-binding protein Era [Enterococcus faecalis TX4244]
gi|315150151|gb|EFT94167.1| GTP-binding protein Era [Enterococcus faecalis TX0012]
gi|315152156|gb|EFT96172.1| GTP-binding protein Era [Enterococcus faecalis TX0031]
gi|315155343|gb|EFT99359.1| GTP-binding protein Era [Enterococcus faecalis TX0043]
gi|315159081|gb|EFU03098.1| GTP-binding protein Era [Enterococcus faecalis TX0312]
gi|315161673|gb|EFU05690.1| GTP-binding protein Era [Enterococcus faecalis TX0645]
gi|315164810|gb|EFU08827.1| GTP-binding protein Era [Enterococcus faecalis TX1302]
gi|315166396|gb|EFU10413.1| GTP-binding protein Era [Enterococcus faecalis TX1341]
gi|315170292|gb|EFU14309.1| GTP-binding protein Era [Enterococcus faecalis TX1342]
gi|315173673|gb|EFU17690.1| GTP-binding protein Era [Enterococcus faecalis TX1346]
gi|315574358|gb|EFU86549.1| GTP-binding protein Era [Enterococcus faecalis TX0309B]
gi|315579040|gb|EFU91231.1| GTP-binding protein Era [Enterococcus faecalis TX0630]
gi|315580167|gb|EFU92358.1| GTP-binding protein Era [Enterococcus faecalis TX0309A]
gi|323481399|gb|ADX80838.1| GTP-binding protein Era [Enterococcus faecalis 62]
gi|327535695|gb|AEA94529.1| GTP-binding protein Era [Enterococcus faecalis OG1RF]
gi|397337238|gb|AFO44910.1| GTP-binding protein Era [Enterococcus faecalis D32]
gi|401673876|gb|EJS80246.1| GTP-binding protein Era [Enterococcus faecalis ATCC 29212]
gi|402350308|gb|EJU85212.1| ribosome biogenesis GTPase Era [Enterococcus faecalis 599]
gi|402353894|gb|EJU88716.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV116]
gi|402357488|gb|EJU92195.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV103]
gi|402365880|gb|EJV00294.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV129]
gi|402367075|gb|EJV01426.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV25]
gi|402367639|gb|EJV01978.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV31]
gi|402371868|gb|EJV06012.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV37]
gi|402374537|gb|EJV08553.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV62]
gi|402375196|gb|EJV09188.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV41]
gi|402383604|gb|EJV17199.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV68]
gi|402383888|gb|EJV17467.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV65]
gi|402385652|gb|EJV19184.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV63]
gi|402392285|gb|EJV25549.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV72]
gi|402392330|gb|EJV25593.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV73]
gi|402397194|gb|EJV30225.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV81]
gi|402400982|gb|EJV33785.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV85]
gi|402403278|gb|EJV35957.1| ribosome biogenesis GTPase Era [Enterococcus faecalis R508]
gi|402405765|gb|EJV38349.1| ribosome biogenesis GTPase Era [Enterococcus faecalis ERV93]
gi|427185790|emb|CCO73014.1| GTP-binding protein era homolog [Enterococcus faecalis str.
Symbioflor 1]
gi|429513289|gb|ELA02876.1| GTP-binding protein Era [Enterococcus faecalis OG1X]
gi|429515635|gb|ELA05146.1| GTP-binding protein Era [Enterococcus faecalis M7]
Length = 300
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V I+G PN GKS+++N +VG K+A +S K TT +++ G+ T + QI DTP
Sbjct: 4 EHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTIPEAQIVFIDTP 63
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K H+ VESA++A+ + + + + D + IER+
Sbjct: 64 GIHKPK----HRLGDFMVESAYNAMREVDATLFMVSADQKRGKGDDFI---IERLKNNNS 116
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
P L +NK+D V DLL + E + ++ I S +G + L L+EQ
Sbjct: 117 P---VYLIINKIDKV-HPDDLLSIIEDYSKQMDFKEIIPISATEGNNFEHLMDVLVEQM 171
>gi|262368561|ref|ZP_06061890.1| GTP-binding protein Era [Acinetobacter johnsonii SH046]
gi|262316239|gb|EEY97277.1| GTP-binding protein Era [Acinetobacter johnsonii SH046]
Length = 342
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 10/171 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D +S V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++A +Q DTP
Sbjct: 36 DFRSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSRAKSQAVFVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D + T D V +E++
Sbjct: 96 GMHKKEVRAINKMMNRAASSALRDVNL---VLFVLDADK-WTQNDELV---LEKLKNAEM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
P +L +NK+D + K L + ++ L + I S L+GA L L
Sbjct: 149 PV---ILVINKIDTLENKNHALPLIQERAKLMNFAEIVPVSALRGANLDHL 196
>gi|428183512|gb|EKX52370.1| hypothetical protein GUITHDRAFT_84828 [Guillardia theta CCMP2712]
Length = 307
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
Query: 123 ERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVM 182
E+Q+E+E+ V E ++ V I+GAPNAGKS+++N +VG+KVA V+ K TT + + G+
Sbjct: 4 EQQDEDEDYVFEGPKRCGTVAILGAPNAGKSTLLNALVGSKVAIVTHKRQTTRNSINGIA 63
Query: 183 TKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHR 234
+ TQ+ DTPG+M K + K V+SAW++ + + + D +
Sbjct: 64 MEGGTQVIYIDTPGIMAPKP--KQRLNKAMVKSAWNSARDADEIFFLIDADK 113
>gi|313149535|ref|ZP_07811728.1| GTP-binding protein Era [Bacteroides fragilis 3_1_12]
gi|423280589|ref|ZP_17259501.1| GTP-binding protein Era [Bacteroides fragilis HMW 610]
gi|424665180|ref|ZP_18102216.1| GTP-binding protein Era [Bacteroides fragilis HMW 616]
gi|313138302|gb|EFR55662.1| GTP-binding protein Era [Bacteroides fragilis 3_1_12]
gi|404575044|gb|EKA79789.1| GTP-binding protein Era [Bacteroides fragilis HMW 616]
gi|404583796|gb|EKA88469.1| GTP-binding protein Era [Bacteroides fragilis HMW 610]
Length = 293
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 97/181 (53%), Gaps = 16/181 (8%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
K+ V I+G PN GKS+++N +VG +++ + K TT H ++G+ D QI DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNVLVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPG 61
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
++ K Y ++ + + SA+ +VL+ V DV + +PD I+++ +Q P
Sbjct: 62 VL--KPNYKLQESMLNFST--SALADADVLLYVTDV---IETPDKNN-EFIQKVRQQTAP 113
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
+L +NK+DL ++K L+K+ E +K L I S A K Y+M++ K+
Sbjct: 114 ---VLLLINKIDLTDQEK-LVKLVEDWKELLPQAEIIPIS----AATKFNVDYVMKRIKE 165
Query: 317 L 317
L
Sbjct: 166 L 166
>gi|357639006|ref|ZP_09136879.1| GTP-binding protein Era [Streptococcus urinalis 2285-97]
gi|418418165|ref|ZP_12991356.1| GTPase Era [Streptococcus urinalis FB127-CNA-2]
gi|357587460|gb|EHJ56868.1| GTP-binding protein Era [Streptococcus urinalis 2285-97]
gi|410869264|gb|EKS17227.1| GTPase Era [Streptococcus urinalis FB127-CNA-2]
Length = 299
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 93/179 (51%), Gaps = 11/179 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+ +N+++G K+A +S K TT ++++G+ T + QI DTPG+
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDNEQIVFIDTPGI 63
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ VESA+S + E ++ + D + +ER+ P
Sbjct: 64 HKPKTALGD----FMVESAYSTLREVETVLFMVPADEKRGKGDDMI---MERLKAAKVP- 115
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
+L +NK+D V + LL+ + F++ ++ + + S L+G ++ L Q L + ++
Sbjct: 116 --VILVINKIDKVHPDQ-LLEQIDDFRNQMDFKEVILISALQGNNVETLLQVLKDNLEE 171
>gi|343514881|ref|ZP_08751946.1| GTP-binding protein Era [Vibrio sp. N418]
gi|342799247|gb|EGU34822.1| GTP-binding protein Era [Vibrio sp. N418]
Length = 326
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 85/176 (48%), Gaps = 12/176 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+Q + I+G PN GKS+++N ++G K++ SRK TT H ++GV T+ D Q DTP
Sbjct: 29 NQHCGFIAIVGRPNVGKSTLLNNILGQKISITSRKPQTTRHRIMGVDTEGDYQAIFVDTP 88
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQA 254
GL + + ++ + S+ S VNL V F V H T+ D V + K
Sbjct: 89 GLHIEEKRAINRLMNRAANSSLSDVNL-----VFFLVDGTHWTADDEMV------LNKLR 137
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
VLC+NKVD+V + D++ L + I S G + L +++
Sbjct: 138 NANFPVVLCVNKVDVVNDRNDVMLHMADLSKLMDFVDIVPISAKHGKNVDVLRKHV 193
>gi|147677230|ref|YP_001211445.1| GTPase [Pelotomaculum thermopropionicum SI]
gi|146273327|dbj|BAF59076.1| GTPase [Pelotomaculum thermopropionicum SI]
Length = 300
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 93/174 (53%), Gaps = 11/174 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V IIG N GKS+++N ++G KVA +S K TT +++L V+T+ D Q+ DTPG
Sbjct: 7 RSGFVAIIGRTNVGKSTLLNSLLGRKVAIMSEKPQTTRNKILCVLTREDAQVVFLDTPGF 66
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K HK + V+ A + ++++ + + + D VI+ + A K
Sbjct: 67 HKPK----HKLGEHLVQVALRTLKEVDLVLFLVEAGQPPGPGDHYVIK------QFAGLK 116
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
+L +NK+DLV ++++LL + EQ+ L G+ I S L G L L + ++
Sbjct: 117 TPVLLVINKIDLV-RREELLPLIEQYSGLFGFAEIVPVSALTGENLPRLLEVVV 169
>gi|312880030|ref|ZP_07739830.1| GTP-binding protein Era [Aminomonas paucivorans DSM 12260]
gi|310783321|gb|EFQ23719.1| GTP-binding protein Era [Aminomonas paucivorans DSM 12260]
Length = 308
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 15/176 (8%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V ++G PN GKSS+ N +VG K+AAVS K TT V G++ + QI + DTPG+
Sbjct: 10 RSGCVALLGRPNVGKSSLANALVGVKIAAVSPKAQTTRQVVRGIVQTPEAQIVLVDTPGV 69
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH---RHLTSPDSRVIRLIERMGKQA 254
+ ++ E+ L EV+ + F V + L+S D R++ I
Sbjct: 70 HEPRHELGRFMIRQIREA------LEEVVGICFLVEATDQRLSSLDRRILEWIREA---- 119
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K+ L +NKVDL+ + L KV ++ +E I S +G+ L L + +
Sbjct: 120 --KRPTALVVNKVDLLKSPEALWKVVALYQDAYPFEEIIPLSATRGSNLDVLLERM 173
>gi|227878694|ref|ZP_03996608.1| GTP-binding protein [Lactobacillus crispatus JV-V01]
gi|256843288|ref|ZP_05548776.1| GTP-binding protein Era [Lactobacillus crispatus 125-2-CHN]
gi|256850355|ref|ZP_05555783.1| GTP-binding protein Era [Lactobacillus crispatus MV-1A-US]
gi|262046497|ref|ZP_06019459.1| GTP-binding protein Era [Lactobacillus crispatus MV-3A-US]
gi|293380657|ref|ZP_06626708.1| GTP-binding protein Era [Lactobacillus crispatus 214-1]
gi|312978179|ref|ZP_07789923.1| GTP-binding protein Era [Lactobacillus crispatus CTV-05]
gi|423318613|ref|ZP_17296490.1| GTPase Era [Lactobacillus crispatus FB049-03]
gi|423321754|ref|ZP_17299625.1| GTPase Era [Lactobacillus crispatus FB077-07]
gi|227861709|gb|EEJ69314.1| GTP-binding protein [Lactobacillus crispatus JV-V01]
gi|256614708|gb|EEU19909.1| GTP-binding protein Era [Lactobacillus crispatus 125-2-CHN]
gi|256712752|gb|EEU27745.1| GTP-binding protein Era [Lactobacillus crispatus MV-1A-US]
gi|260573368|gb|EEX29926.1| GTP-binding protein Era [Lactobacillus crispatus MV-3A-US]
gi|290922785|gb|EFD99736.1| GTP-binding protein Era [Lactobacillus crispatus 214-1]
gi|310894897|gb|EFQ43967.1| GTP-binding protein Era [Lactobacillus crispatus CTV-05]
gi|405591692|gb|EKB65166.1| GTPase Era [Lactobacillus crispatus FB077-07]
gi|405593893|gb|EKB67328.1| GTPase Era [Lactobacillus crispatus FB049-03]
Length = 300
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 96/184 (52%), Gaps = 18/184 (9%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
++E++ KS V ++G PN GKS+++NY+VG KVA S K TT + + G+ T + Q+
Sbjct: 1 MEEKEFKSGFVALVGRPNVGKSTLMNYLVGQKVAITSNKPQTTRNRISGIYTSDEMQVVF 60
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERM 250
DTPG+ H + ++ A S +L +V +V+F V + D + L++ +
Sbjct: 61 VDTPGIF-----KPHSKLDDYMDKA-SVSSLNDVDLVLFMVEPEEMGKGDQYIANLLKEV 114
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKAL 306
K +L +NKVD + K LL + + + L G++ I S +G G LK +
Sbjct: 115 ------KVPVLLVINKVDEIHPNK-LLPIMDSYHKLEGFKEILPISATQGIGIEDLLKTI 167
Query: 307 TQYL 310
+YL
Sbjct: 168 KEYL 171
>gi|417810225|ref|ZP_12456904.1| GTP-binding protein Era [Lactobacillus salivarius GJ-24]
gi|335349021|gb|EGM50521.1| GTP-binding protein Era [Lactobacillus salivarius GJ-24]
Length = 300
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 11/170 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+ +N +VG K+A +S K TT +++ G+ T+ D QI DTPG+
Sbjct: 10 VAILGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGIYTEDDAQIVFIDTPGIHKPH 69
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S VESA S +N + ++ + + + D + IER+ P
Sbjct: 70 SRLG----DFMVESALSTLNEVDAVLFMVNATQKRGRGDDFI---IERLKNVKKPI---Y 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
L +NK+D + K LL++ +++++ Y +F S L+G L + L+
Sbjct: 120 LVINKIDQIHPDK-LLQIMDEYRNTLDYAEVFPISALEGNNCPELIESLV 168
>gi|257869127|ref|ZP_05648780.1| GTP-binding protein Era [Enterococcus gallinarum EG2]
gi|357050006|ref|ZP_09111220.1| GTP-binding protein era [Enterococcus saccharolyticus 30_1]
gi|257803291|gb|EEV32113.1| GTP-binding protein Era [Enterococcus gallinarum EG2]
gi|355382489|gb|EHG29587.1| GTP-binding protein era [Enterococcus saccharolyticus 30_1]
Length = 299
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
KS I+G PN GKS+++N +VG K+A +S K TT +++ GV T D QI DTPG
Sbjct: 4 HKSGFAAIVGRPNVGKSTLLNRVVGQKIAIMSDKAQTTRNKIQGVYTTPDAQIVFIDTPG 63
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ K H+ VE+A+SA+ +V + + + D + IER+ K P
Sbjct: 64 IHKPK----HRLGDFMVETAYSALREVDVTLFMISADQKRGKGDDFI---IERLRKNETP 116
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+D V +LL + E + + I S +G + L + +++Q
Sbjct: 117 V---FLVINKIDKV-HPDELLAIIEDYAAQMTFAEIVPISATEGNNFETLMRLVIDQM 170
>gi|383861218|ref|XP_003706083.1| PREDICTED: GTPase Era, mitochondrial-like [Megachile rotundata]
Length = 343
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 5/185 (2%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
+ ++K V V IG PN GKS+++N + + S K +TT H+ V + DTQI D
Sbjct: 51 QSNKKCVKVAFIGLPNVGKSTLVNQLSRRSICPASAKVHTTMHKADAVYIENDTQIVFMD 110
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPGL+ + +K K + +++ +V+ ++ DV T ++ + +
Sbjct: 111 TPGLVSMREMKKYKLSKSFRDDPLISISEADVIGIIQDVTNVYTR--HKISNFVIDSLQN 168
Query: 254 APPKQKRVLCMNKVDLVTKKK---DLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+L +NKVD + KK DL ++ + P ++ IFM S L G G+ L YL
Sbjct: 169 KREDTSLLLILNKVDKIKKKTVLLDLTRLLTNSEIYPKFDDIFMISALTGDGIDDLRNYL 228
Query: 311 MEQFK 315
++ K
Sbjct: 229 LDSAK 233
>gi|257093154|ref|YP_003166795.1| GTP-binding protein Era [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257045678|gb|ACV34866.1| GTP-binding protein Era [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 294
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S + IIG PN GKS+++N ++G K++ VSR+ TT H ++G++T+ADTQ DTPG
Sbjct: 5 RSGQIAIIGRPNVGKSTLLNALIGEKLSIVSRRAQTTRHRIIGILTRADTQYVFVDTPGF 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
++ + V A L EV +V+F V R +R + P
Sbjct: 65 QTRYGNALNQVMNRGVRQA-----LAEVDVVLFVVEAGRFDERDRAVR------QLVPSD 113
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
++ +NK+D + K LL + I S +GA L L
Sbjct: 114 CPLIIVVNKIDQLKDKARLLPFLADLAREGDFAAIVPVSATRGAQLDEL 162
>gi|293335577|ref|NP_001167959.1| uncharacterized protein LOC100381675 [Zea mays]
gi|223945135|gb|ACN26651.1| unknown [Zea mays]
Length = 165
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 42/50 (84%)
Query: 264 MNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
MNKVDLV KKDLLKVA++F+ LPGYER FM SGLKG G+K L QYLM+Q
Sbjct: 1 MNKVDLVEDKKDLLKVAKEFEDLPGYERYFMVSGLKGKGVKDLIQYLMDQ 50
>gi|399924387|ref|ZP_10781745.1| GTPase Era [Peptoniphilus rhinitidis 1-13]
Length = 301
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 99/186 (53%), Gaps = 19/186 (10%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
++E + KS + ++G PN GKS+++N ++G K++A+S K TT + + T D+Q+
Sbjct: 1 MEENNFKSGYISVVGRPNVGKSTLLNSIIGEKISAISSKPQTTRQNITFIHTDDDSQMIF 60
Query: 192 FDTPGLML--NKSG-YSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIE 248
DTPG+ NK G + + K +E A +++ + DV + + + +I +++
Sbjct: 61 LDTPGIQRPKNKLGEFMLNESKEGIEEA-------DIITYIVDVSKRIGKAERSIIDILK 113
Query: 249 RMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LK 304
Q P +L +NKVD + KK++LL++ + + ++ + S +K G L+
Sbjct: 114 EYNGQIPI----ILLINKVDKI-KKEELLEIISMYSNEGIFDELIPISAIKNDGIDIYLE 168
Query: 305 ALTQYL 310
L +YL
Sbjct: 169 TLKKYL 174
>gi|421869083|ref|ZP_16300727.1| GTP-binding protein Era [Burkholderia cenocepacia H111]
gi|358071219|emb|CCE51605.1| GTP-binding protein Era [Burkholderia cenocepacia H111]
Length = 287
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++N +VG K++ SRK TT H + G+ T D Q DTPG
Sbjct: 2 IAIVGRPNVGKSTLMNALVGQKISITSRKAQTTRHRITGINTFDDAQFVFVDTPGFQTRH 61
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S ++ + V S ++V+ V++ V + R D +V+ LI PP +
Sbjct: 62 STALNRSLNRAVTSTLTSVD---VILFVIEAGR-FGPDDQKVLDLI-------PPGMPTL 110
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
L NK+D V K L ++ L + + S K +K L
Sbjct: 111 LIANKIDRVNDKASLFPFMQKVSELREFTELVPLSAQKPEDIKRL 155
>gi|308274308|emb|CBX30907.1| GTP-binding protein era homolog [uncultured Desulfobacterium sp.]
Length = 303
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 95/173 (54%), Gaps = 11/173 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I GAPNAGKS+++N ++G K++ S+K TT +++LGV+ + +Q+ DTPG+
Sbjct: 13 KSGYVAIAGAPNAGKSTLLNKLLGFKISITSKKPQTTRNKILGVVHRPLSQLVFIDTPGI 72
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + K V++A S +++++V D + +S +I+ +E + K
Sbjct: 73 FKANNALNIK----IVDAALSTFGDVDIILIVGDAANPDSKSESILIKNMESINKPV--- 125
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
VL +NK+D+V K K LL++ Q++ ++ + S G++ L L
Sbjct: 126 ---VLALNKIDIVDKSK-LLEIIIQWEKRFDFKAVVPVSAKSAEGVEDLLCVL 174
>gi|228476104|ref|ZP_04060812.1| GTP-binding protein Era [Staphylococcus hominis SK119]
gi|314936312|ref|ZP_07843659.1| GTP-binding protein Era [Staphylococcus hominis subsp. hominis C80]
gi|418619982|ref|ZP_13182793.1| GTP-binding protein Era [Staphylococcus hominis VCU122]
gi|228269927|gb|EEK11407.1| GTP-binding protein Era [Staphylococcus hominis SK119]
gi|313654931|gb|EFS18676.1| GTP-binding protein Era [Staphylococcus hominis subsp. hominis C80]
gi|374823545|gb|EHR87540.1| GTP-binding protein Era [Staphylococcus hominis VCU122]
Length = 299
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 15/181 (8%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFMNRVIGHKIAIMSDKAQTTRNKIQGVMTREDAQIIFLDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D +RV A + ++ + +M + +V+ + D ++ +++ +
Sbjct: 63 G--IHKPKHKLGDYMMRV--AKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYLM 311
K L +NK+DLV + K+ E++K + I S L+G + L YL
Sbjct: 114 -KTPVFLVLNKIDLVHPDALMPKI-EKYKTYMDFTEIVPISALEGLNVDHFIDVLKDYLP 171
Query: 312 E 312
E
Sbjct: 172 E 172
>gi|149200804|ref|ZP_01877779.1| GTP-binding protein Era [Roseovarius sp. TM1035]
gi|149145137|gb|EDM33163.1| GTP-binding protein Era [Roseovarius sp. TM1035]
Length = 301
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 9/169 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ +IG PNAGKS+++N MVG KV+ V+ K TT + GV + +Q+ DTPGL +
Sbjct: 8 IALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGQSQLVFVDTPGLFQPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW +V++++ + HR +T R++ + + K +K
Sbjct: 68 RRLD----RAMVAAAWGGAADADVVILLIEAHRGVTEGVERILEGLTGIAK----GRKVA 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V + + LL + + +E+ F+ S +G G+ L Q+L
Sbjct: 120 LAINKIDRV-QAQVLLALTKDMNERFAFEKTFLISAERGHGVDDLRQWL 167
>gi|389721527|ref|ZP_10188279.1| GTPase Era [Acinetobacter sp. HA]
gi|388608823|gb|EIM38019.1| GTPase Era [Acinetobacter sp. HA]
Length = 342
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 90/171 (52%), Gaps = 10/171 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D +S V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ +Q DTP
Sbjct: 36 DYRSGFVAIVGRPNVGKSTLMNHILGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL V+F V +P+ ++ +E++
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNL-----VLFVVDADKWTPNDDLV--LEKLKNADM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
P +L +NK+D + K L + ++ L + I S L+GA L+ L
Sbjct: 149 PV---ILVINKIDTLENKNHALPLIQERAKLMNFAEIVPVSALRGANLEHL 196
>gi|424914790|ref|ZP_18338154.1| GTP-binding protein Era [Rhizobium leguminosarum bv. trifolii
WSM597]
gi|392850966|gb|EJB03487.1| GTP-binding protein Era [Rhizobium leguminosarum bv. trifolii
WSM597]
Length = 313
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N +VG KV+ VS K TT V G+ + QI DTPG+ +
Sbjct: 24 VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAIVRGIAIHDNAQIVFMDTPGIFKPR 83
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW ++++++ D R L ++ ++ + +Q ++
Sbjct: 84 RRLD----RAMVTSAWGGARDADLIVLLIDSERGLRGDAEAILEGLKEV------RQPKI 133
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V ++DLL +A ++R FM S G+G + YL
Sbjct: 134 LLLNKIDRVN-REDLLALAAAANEKIAFDRTFMISAENGSGCDDVMDYL 181
>gi|317056494|ref|YP_004104961.1| GTP-binding protein Era [Ruminococcus albus 7]
gi|315448763|gb|ADU22327.1| GTP-binding protein Era [Ruminococcus albus 7]
Length = 298
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 10/173 (5%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
K++ V I G NAGKSS++N +VG K+AAVS K TT ++ GV+TK +TQ DTPG+
Sbjct: 3 KNIFVTIAGRANAGKSSLLNALVGEKIAAVSDKPQTTRTKITGVLTKGETQFVFMDTPGM 62
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ S V E+ + ++++ + D + ++ + +I + K
Sbjct: 63 HKAKNKLSEHMVNTVNET----ITGVDMIIFMCDCTKKISDNEKSLIESFK------GGK 112
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K +L +NK+DL+ K+D++ ++ L + + S + GL + L
Sbjct: 113 SKVILALNKIDLLDNKEDVIVKLSEYSALYDFAEVVPISVVGNDGLDIIMDIL 165
>gi|332187780|ref|ZP_08389514.1| GTP-binding protein Era [Sphingomonas sp. S17]
gi|332012130|gb|EGI54201.1| GTP-binding protein Era [Sphingomonas sp. S17]
Length = 298
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 89/175 (50%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+Q+ V ++GAPNAGKS+++N +VG KVA VS K TT ++LGV + + QI + DTP
Sbjct: 3 EQRCGLVAVVGAPNAGKSTLVNALVGQKVAIVSPKAQTTRAKLLGVAIEGEAQILLVDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K + V +AW ++L +V D + +V + E + +
Sbjct: 63 GIFEPKRRLD----RAMVAAAWEGAEGADILALVVDGKGGI---GPKVTAIAESIAHRPE 115
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
PK L +NKVD+ K + LL AE+ + ++ + S G GL L L
Sbjct: 116 PKH---LILNKVDIADKAR-LLGHAEKLNQVVPFDETWFVSAQTGDGLPELKTRL 166
>gi|169832185|ref|YP_001718167.1| GTP-binding protein Era [Candidatus Desulforudis audaxviator
MP104C]
gi|169639029|gb|ACA60535.1| GTP-binding protein Era [Candidatus Desulforudis audaxviator
MP104C]
Length = 308
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 85/159 (53%), Gaps = 10/159 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V IIG PN GKS+++N +VG KVA +S K TT H + V+T+ D Q+ DTPG+
Sbjct: 15 RSGFVTIIGRPNVGKSTLLNSLVGRKVAIISDKPQTTRHRIRAVLTRDDAQVVFVDTPGI 74
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K H+ ++ V++A + ++++ + + HR D + +ER+ P
Sbjct: 75 HKPK----HRLGRMMVDTALKTLQDVDLILFLIEAHRESGPGDDFI---LERLAGIRTPV 127
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTS 296
L +NK+DLV K + L + E K + E I +++
Sbjct: 128 ---FLVINKIDLVAKPRLLPLIDEMRKKMAFREIIPLSA 163
>gi|390453089|ref|ZP_10238617.1| GTPase Era [Paenibacillus peoriae KCTC 3763]
Length = 300
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 94/179 (52%), Gaps = 15/179 (8%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N+++G K+A +S K TT +++ GV T DTQI DTPG+
Sbjct: 7 KSGFVAIVGRPNVGKSTLMNHVIGQKIAIMSDKPQTTRNKIHGVYTTEDTQIVFLDTPGI 66
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+S ++A++A+ E ++ + D L D ++ ++++ K
Sbjct: 67 HKRQSKLG----DYMNQTAFNALGEVEAVLFLIDAAEGLGGGDRFIVEQLKQV------K 116
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYLME 312
+L +NK+D + + + LL + EQ++ L + I S G L+ L +YL E
Sbjct: 117 TPVILVLNKIDRI-EPEALLPLIEQYRKLYDFAEIVPISAKMGNNVDRLLEQLQKYLPE 174
>gi|365839497|ref|ZP_09380735.1| ribosome biogenesis GTPase Era [Anaeroglobus geminatus F0357]
gi|364564587|gb|EHM42345.1| ribosome biogenesis GTPase Era [Anaeroglobus geminatus F0357]
Length = 298
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 91/173 (52%), Gaps = 11/173 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
E++ KS V ++G PN GKS++IN ++G KV VS K TT +++L + T AD+QI D
Sbjct: 2 EQEFKSGFVSVVGRPNVGKSTLINRILGQKVTIVSDKAQTTRNKILCIHTDADSQIVFLD 61
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG+ K HK + E+A+ ++ + ++ + D ++ I+ +
Sbjct: 62 TPGIHKPK----HKLGRFMDEAAYGSLKDIDAVLFLVAADEKRGPGDMFILHKIKDI--H 115
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
AP L +NK+D + K+K LLK+ + L + I S LKG + A+
Sbjct: 116 APV----FLVINKIDKLDKEK-LLKIMADYSSLCDFAAIIPVSALKGENVSAV 163
>gi|357417976|ref|YP_004930996.1| GTPase Era [Pseudoxanthomonas spadix BD-a59]
gi|355335554|gb|AER56955.1| GTPase Era [Pseudoxanthomonas spadix BD-a59]
Length = 302
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 87/180 (48%), Gaps = 8/180 (4%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+S +V +IG PN GKS++ N +VG KV+ S + TT H +LG+ T + QI + DTP
Sbjct: 6 SHRSGSVAVIGRPNVGKSTLTNALVGAKVSITSSRPQTTRHRLLGIATFPEGQIALVDTP 65
Query: 196 GLMLNKSGYSHKDV-KVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
GL + YS + +V +A A+ + ++V + R D+ ++ G
Sbjct: 66 GLHRQQGKYSASAMSRVMNRAARGALEGVDAGLLVIEAGR-WDEADTLAYNVLSDTGIPV 124
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
+L +NKVD + K +LL Q + + S LK GL+AL + L+
Sbjct: 125 ------ILVINKVDRLKDKSELLPFLAQVTEGRTFAAVHPISALKKNGLEALVRELLAHL 178
>gi|295693063|ref|YP_003601673.1| GTP-binding protein era homolog [Lactobacillus crispatus ST1]
gi|295031169|emb|CBL50648.1| GTP-binding protein era homolog [Lactobacillus crispatus ST1]
Length = 300
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 96/184 (52%), Gaps = 18/184 (9%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
++E++ KS V ++G PN GKS+++NY+VG KVA S K TT + + G+ T + Q+
Sbjct: 1 MEEKEFKSGFVALVGRPNVGKSTLMNYLVGQKVAITSNKPQTTRNRISGIYTSDEMQVVF 60
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERM 250
DTPG+ H + ++ A S +L +V +V+F V + D + L++ +
Sbjct: 61 VDTPGIF-----KPHSKLDDYMDKA-SVSSLNDVDLVLFMVEPEEMGKGDQYIANLLKEV 114
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKAL 306
K +L +NKVD + K LL + + + L G++ I S +G G LK +
Sbjct: 115 ------KVPVLLVINKVDDIHPNK-LLPIMDSYHKLEGFKEILPISATQGIGIEDLLKTI 167
Query: 307 TQYL 310
+YL
Sbjct: 168 KEYL 171
>gi|206559399|ref|YP_002230160.1| GTP-binding protein Era [Burkholderia cenocepacia J2315]
gi|206561199|ref|YP_002231964.1| GTP-binding protein Era [Burkholderia cenocepacia J2315]
gi|444360453|ref|ZP_21161685.1| GTP-binding protein Era [Burkholderia cenocepacia BC7]
gi|444369422|ref|ZP_21169175.1| GTP-binding protein Era [Burkholderia cenocepacia K56-2Valvano]
gi|198035437|emb|CAR51313.1| GTP-binding protein Era 2 [Burkholderia cenocepacia J2315]
gi|198037241|emb|CAR53163.1| GTP-binding protein Era 1 [Burkholderia cenocepacia J2315]
gi|443599139|gb|ELT67445.1| GTP-binding protein Era [Burkholderia cenocepacia K56-2Valvano]
gi|443600075|gb|ELT68300.1| GTP-binding protein Era [Burkholderia cenocepacia BC7]
Length = 299
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++N +VG K++ SRK TT H + G+ T D Q DTPG
Sbjct: 14 IAIVGRPNVGKSTLMNALVGQKISITSRKAQTTRHRITGINTFDDAQFVFVDTPGFQTRH 73
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S ++ + V S ++V+ V++ V + R D +V+ LI PP +
Sbjct: 74 STALNRSLNRAVTSTLTSVD---VILFVIEAGR-FGPDDQKVLDLI-------PPGMPTL 122
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
L NK+D V K L ++ L + + S K +K L
Sbjct: 123 LIANKIDRVNDKASLFPFMQKVSELREFTELVPLSAQKPEDIKRL 167
>gi|331701380|ref|YP_004398339.1| GTP-binding protein Era-like-protein [Lactobacillus buchneri NRRL
B-30929]
gi|406026942|ref|YP_006725774.1| GTP-binding protein era [Lactobacillus buchneri CD034]
gi|329128723|gb|AEB73276.1| GTP-binding protein Era-like-protein [Lactobacillus buchneri NRRL
B-30929]
gi|405125431|gb|AFS00192.1| GTP-binding protein era [Lactobacillus buchneri CD034]
Length = 300
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 95/181 (52%), Gaps = 15/181 (8%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D S + I+G PN GKS+ +N ++G K+A +S K TT +++ GV T + QI DTP
Sbjct: 5 DFHSGFIAIVGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTKEAQIVFIDTP 64
Query: 196 GLM--LNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
G+ NK G +ESA SA+ + ++ + + H + D+ +I ++ + K
Sbjct: 65 GIHKPQNKLG------DFMMESALSALKEVDAVLFMVNATEHRGAGDNFIIDQLKNVDKP 118
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
L +NK+D ++ D++ + EQ+K+ ++ ++ S L+G + L L+++
Sbjct: 119 I------YLLINKIDEIS-PDDIMPIIEQYKNALEFKDVYPISALQGNNVPELIDTLIKE 171
Query: 314 F 314
Sbjct: 172 L 172
>gi|56478591|ref|YP_160180.1| GTP-binding protein Era [Aromatoleum aromaticum EbN1]
gi|56314634|emb|CAI09279.1| GTP-binding protein Era homolog [Aromatoleum aromaticum EbN1]
Length = 305
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 15/184 (8%)
Query: 129 EEEVKEEDQKSVA----VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTK 184
+E+ + D K++ V I+G PN GKS+++N ++G K++ VSRK TT H V G++T
Sbjct: 3 QEDTPQADDKALFRTGFVAIVGRPNVGKSTLLNRLIGQKISIVSRKAQTTRHRVTGILTS 62
Query: 185 ADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVI 244
+ Q DTPG ++ + V V+L + +V + R D +V+
Sbjct: 63 DNAQFVFVDTPGFQTRHRNALNRSMNRTVSQVLGDVDL---VFLVIEAGR-FGDDDRKVV 118
Query: 245 RLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLK 304
++ P K VL +NKVD + K LL + + + I S +G ++
Sbjct: 119 SVL-------PGDAKVVLVINKVDRLGDKSQLLPFIAKMAEVYPFTEIVPLSAERGTNVE 171
Query: 305 ALTQ 308
AL +
Sbjct: 172 ALVK 175
>gi|253996999|ref|YP_003049063.1| GTP-binding protein Era [Methylotenera mobilis JLW8]
gi|253983678|gb|ACT48536.1| GTP-binding protein Era [Methylotenera mobilis JLW8]
Length = 310
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 89/180 (49%), Gaps = 15/180 (8%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
K V I+G PN GKS+++N+++G K+A SRK TT H +LG+ T DTQ DTPG
Sbjct: 22 KCGTVAIVGRPNVGKSTLLNHILGMKLAITSRKAQTTRHRLLGIHTTDDTQYLFVDTPGF 81
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+K + V + V++ VL V+ + L D +V++L+ K
Sbjct: 82 QQKHLNALNKGLNKTVTQVLTEVDV--VLFVIEPM--KLGDADRKVLQLLS-------DK 130
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYLMEQ 313
+L +NK+DL+ K ++L + + F + I S K LK++ YL EQ
Sbjct: 131 TPTILVVNKLDLMGDKGNILPLIQDFDLEFPFSEIVPVSAKKSLNLDELLKSIRTYLPEQ 190
>gi|259417698|ref|ZP_05741617.1| GTP-binding protein Era [Silicibacter sp. TrichCH4B]
gi|259346604|gb|EEW58418.1| GTP-binding protein Era [Silicibacter sp. TrichCH4B]
Length = 301
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 91/170 (53%), Gaps = 11/170 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ +IG PNAGKS+++N MVG KV+ V+ K TT + GV + ++Q+ DTPGL +
Sbjct: 8 IALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGESQLVFVDTPGLFQPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW +V++++ + HR +T V R+IE +G+ A + +RV
Sbjct: 68 RRLD----RAMVAAAWGGAADADVIVLLIEAHRGITEG---VERIIENLGEVA--QGRRV 118
Query: 262 -LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V + LL + + + FM S KG G L ++L
Sbjct: 119 ALAINKIDKV-QSDVLLGLTKDLNDRFSFAETFMISAEKGYGTDDLRKWL 167
>gi|170732445|ref|YP_001764392.1| GTP-binding protein Era [Burkholderia cenocepacia MC0-3]
gi|169815687|gb|ACA90270.1| GTP-binding protein Era [Burkholderia cenocepacia MC0-3]
Length = 287
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++N +VG K++ SRK TT H + G+ T D Q DTPG
Sbjct: 2 IAIVGRPNVGKSTLMNALVGQKISITSRKAQTTRHRITGINTFDDAQFVFVDTPGFQTRH 61
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S ++ + V S ++V+ V++ V + R D +V+ LI PP +
Sbjct: 62 STALNRSLNRAVTSTLTSVD---VILFVIEAGR-FGPDDQKVLDLI-------PPGMPTL 110
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
L NK+D V K L ++ L + + S K +K L
Sbjct: 111 LIANKIDRVNDKATLFPFMQKVSELREFTELVPLSAQKPEDIKRL 155
>gi|239827759|ref|YP_002950383.1| GTP-binding protein Era [Geobacillus sp. WCH70]
gi|239808052|gb|ACS25117.1| GTP-binding protein Era [Geobacillus sp. WCH70]
Length = 302
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
+ +E KS V I+G PN GKS+ +N ++G K+A +S K TT +++ GV T D QI
Sbjct: 1 MNKEGYKSGFVSIVGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVYTTDDAQIIF 60
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMG 251
DTPG ++K + D ++V A +A+ ++++ + + D+ +I ++ +
Sbjct: 61 IDTPG--MHKPKHKLGDFMMKV--ALNALREVDLILFMINAEEGFGRGDAFIIEQLKAVN 116
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
L +NK+D V DLL + +Q+K L + I S L+G ++ L +
Sbjct: 117 TPV------FLVINKIDKV-HPDDLLPLIDQYKDLYPFAEIIPISALQGNNIETLVE 166
>gi|406837897|ref|ZP_11097491.1| Like GTP-binding protein [Lactobacillus vini DSM 20605]
Length = 297
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 11/165 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIG PN GKS+ +N ++G K+A +S K TT +++ G+ T D+Q+ DTPG+ +
Sbjct: 7 VAIIGRPNVGKSTFLNRIIGQKIAIMSDKAQTTRNKIQGIYTTTDSQVVFIDTPGIHKPQ 66
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S V++A S +N + ++ + + + D+ + IER+ K P
Sbjct: 67 SQLGD----YMVQAALSTLNDVDAVLFMVNATQKRGRGDNFI---IERLKKVNQPI---F 116
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
L +NK+D V + DLL E F+ + I+ S L+G + L
Sbjct: 117 LVINKIDQV-QPNDLLPFVEDFRQALDFREIYPISALEGINCEEL 160
>gi|295099666|emb|CBK88755.1| GTP-binding protein Era [Eubacterium cylindroides T2-87]
Length = 300
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S + I+G PNAGKS+++N ++ KVA +S K NTT + + G++T D Q DTPG+
Sbjct: 4 RSGFIAIVGRPNAGKSTLMNALLKEKVAIMSDKPNTTRNNIAGILTLEDAQYVFVDTPGI 63
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ +V ++A++A+ +V+ + D + S D ++ IE++ K
Sbjct: 64 HKPRQQLG----RVLNKNAYTAMEDCDVIGWIIDGTQSFGSGDEFILNRIEQL------K 113
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKDL 317
+ +L +NKVD+V K+K LL+ ++ +++I S LK L L E +
Sbjct: 114 KPVILIVNKVDMVKKEK-LLETLLGWQDRYNFDQIVPISALKENNLNELLDVFREYLPEG 172
Query: 318 GL 319
G+
Sbjct: 173 GM 174
>gi|209548602|ref|YP_002280519.1| GTP-binding protein Era [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209534358|gb|ACI54293.1| GTP-binding protein Era [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 313
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N +VG KV+ VS K TT V G+ + QI DTPG+ +
Sbjct: 24 VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAIVRGIAIHDNAQIVFMDTPGIFKPR 83
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW ++++++ D R L ++ ++ + +Q ++
Sbjct: 84 RRLD----RAMVTSAWGGARDADLIVLLIDSERGLRGDAEAILEGLKEV------RQPKI 133
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V ++DLL +A ++R FM S G+G + YL
Sbjct: 134 LLLNKIDRVN-REDLLALAAAANEKIAFDRTFMISAENGSGCDDVMDYL 181
>gi|427392561|ref|ZP_18886566.1| GTP-binding protein Era [Alloiococcus otitis ATCC 51267]
gi|425731241|gb|EKU94060.1| GTP-binding protein Era [Alloiococcus otitis ATCC 51267]
Length = 310
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 11/173 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V ++G PN GKS+++N ++G K+ +S K TT +++ G+ T QI DTPG+
Sbjct: 16 KSGFVTLLGRPNVGKSTLLNQILGQKITIISDKPQTTRNKIQGIYTDQAGQIVFIDTPGI 75
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K H+ + V+SA S +N ++++ V +V R P R I I+++ P
Sbjct: 76 HKPK----HRLGRFMVDSAMSTINEVDLVLFVVNV-REKIGPGDRFI--IDKLRTIDTPV 128
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +N++D V DLL V ++ + + TSGL+G ++ L Q +
Sbjct: 129 ---FLIINQIDQV-DPTDLLPVISDYQEEFDFAEVVPTSGLEGENIQELIQTI 177
>gi|392972237|ref|ZP_10337629.1| GTP-binding protein Era [Staphylococcus equorum subsp. equorum Mu2]
gi|403046438|ref|ZP_10901907.1| GTP-binding protein Era [Staphylococcus sp. OJ82]
gi|392509950|emb|CCI60932.1| GTP-binding protein Era [Staphylococcus equorum subsp. equorum Mu2]
gi|402763134|gb|EJX17227.1| GTP-binding protein Era [Staphylococcus sp. OJ82]
Length = 299
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 89/164 (54%), Gaps = 11/164 (6%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
KS + IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTPG
Sbjct: 4 HKSGFISIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTQEDAQIIFLDTPG 63
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
++K + D +RV A + ++ + +M + +V+ + D ++ +++ +
Sbjct: 64 --IHKPKHKLGDYMMRV--ATNTLSEIDAIMFMVNVNEDIGRGDEYIMDMLKTI------ 113
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKG 300
K L +NK+DLV +L+ E++K + I S L+G
Sbjct: 114 KTPVFLVLNKIDLV-HPDELMPRIEKYKKYMDFTEIVPISALEG 156
>gi|403237533|ref|ZP_10916119.1| GTPase Era [Bacillus sp. 10403023]
Length = 303
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 94/178 (52%), Gaps = 15/178 (8%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V IIG PN GKS+ +N+++G K+A +S K TT ++V GV+T+ D+QI DTPG+
Sbjct: 8 KSGFVSIIGRPNVGKSTFLNHVIGQKIAIMSDKPQTTRNKVQGVLTEEDSQIIFIDTPGI 67
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K HK ++ A + + ++++ + + D + IER+ P
Sbjct: 68 HKPK----HKLGDFMMKVAQNTLKEVDLVLFMINAEEGYGRGDEFI---IERLKNIQTPV 120
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFK 315
L +NK+D + K LL++ E++K L ++ I S L+G T L+EQ K
Sbjct: 121 ---FLVVNKIDQIHPDK-LLELIEKYKGLYPFKEIVPISALQGTN----TSRLVEQIK 170
>gi|365853627|ref|ZP_09393894.1| ribosome biogenesis GTPase Era [Lactobacillus parafarraginis F0439]
gi|363712252|gb|EHL95951.1| ribosome biogenesis GTPase Era [Lactobacillus parafarraginis F0439]
Length = 300
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 92/179 (51%), Gaps = 15/179 (8%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V I+G PN GKS+ +N +VG K+A +S K TT +++ GV T D QI DTPG+
Sbjct: 7 RSGFVAIVGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGVYTTDDAQIVFIDTPGI 66
Query: 198 M--LNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
NK G ++SA SA+ + ++ + + + D+ +I+ ++ + K
Sbjct: 67 HKPQNKLG------DFMMDSALSALREVDAVLFMVNATERRGAGDNFIIKQLQNVDKPI- 119
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+D ++ D++ + EQ+K ++ +F S L+G + L L +
Sbjct: 120 -----YLLINKIDEIS-PDDVMAIIEQYKDALPFKEVFPISALQGNNVPELISSLTNEL 172
>gi|160945169|ref|ZP_02092395.1| hypothetical protein FAEPRAM212_02688 [Faecalibacterium prausnitzii
M21/2]
gi|158442900|gb|EDP19905.1| ribosome biogenesis GTPase Era [Faecalibacterium prausnitzii M21/2]
Length = 324
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 92/182 (50%), Gaps = 17/182 (9%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D SV V +IG PN GKSS+ N +VG KVA V+ K TT + GV+T+ Q + DTP
Sbjct: 25 DTSSVFVAVIGRPNVGKSSLTNLLVGEKVAIVTSKPQTTRTRITGVITRGPLQYVLLDTP 84
Query: 196 GLMLNKSGYSHKDVKVRVE-SAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
G+ +H + R++ +A ++ +V M++F+ + L + + L+E + +
Sbjct: 85 GVH-----KAHNKLGKRMDKTASDSIADVDVSMMLFEPYGALNESE---MALVEALHRSG 136
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYL 310
P + +NK DLV + DL + K L ++ I+ S G AL++Y
Sbjct: 137 PA----IAVINKTDLVKEPADLETRKAELKALGVFDEIYTISVRNKEGSEELFDALSRYA 192
Query: 311 ME 312
+E
Sbjct: 193 VE 194
>gi|317051559|ref|YP_004112675.1| GTP-binding protein Era [Desulfurispirillum indicum S5]
gi|316946643|gb|ADU66119.1| GTP-binding protein Era [Desulfurispirillum indicum S5]
Length = 300
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 93/179 (51%), Gaps = 7/179 (3%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S VGI+G PN GKS+++ ++G K++ +S K TT + ++GV D Q+ DTPG
Sbjct: 4 RSGFVGIVGRPNVGKSTLMGAIIGEKISIISDKPQTTRNRIMGVWHGDDFQVVFLDTPG- 62
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
++K Y D + +A+S ++ ++L++V + + ++ + ++ PP
Sbjct: 63 -VHKGKYGINDFM--LNTAFSVLSEVDILLLVVEYWETGGQEFNLLLGELRSRHRELPPV 119
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
L +NK+DL K ++L+ + K L + I S L G L L ++EQ ++
Sbjct: 120 ---FLVVNKIDLAEDKHEILESIARQKDLFDFAGIIPVSALNGENLDRLKALIVEQMEE 175
>gi|431796196|ref|YP_007223100.1| GTP-binding protein Era [Echinicola vietnamensis DSM 17526]
gi|430786961|gb|AGA77090.1| GTP-binding protein Era [Echinicola vietnamensis DSM 17526]
Length = 296
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 98/186 (52%), Gaps = 22/186 (11%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
E+ K+ V IIG PN GKS+++N +VG +++ +S K TT H +LG+M D QI D
Sbjct: 3 EKTHKAGFVNIIGKPNVGKSTLMNVLVGERLSIISSKAQTTRHRILGLMNGDDYQIVFSD 62
Query: 194 TPGLMLNKSGYS-HKDVKVRVESAWSAVNL----FEVLMVVFDVHRHLTSPDSRVIRLIE 248
TPG++ K Y HK S S VNL +V++ V D++ D+ + +IE
Sbjct: 63 TPGML--KPKYELHK-------SMMSFVNLSLEDADVIVFVTDLY----ETDNEIEEVIE 109
Query: 249 RMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
++ P +L +NK+DL +K+ L +V + + + + S L+ ++ + Q
Sbjct: 110 KINHAGAP---VLLVINKIDL-SKENKLEEVTQYWTERIKADTVIPVSALENFNIERIMQ 165
Query: 309 YLMEQF 314
++++
Sbjct: 166 EILDRL 171
>gi|350561406|ref|ZP_08930244.1| GTP-binding protein Era [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349780438|gb|EGZ34756.1| GTP-binding protein Era [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 303
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 90/176 (51%), Gaps = 10/176 (5%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E + V ++G PN GK++++N ++G K+AA +RK +TT H +LG++T+ Q+ + DT
Sbjct: 7 ESTRCGLVALVGRPNVGKTTLMNRLLGEKLAATTRKPHTTRHRILGIVTQGADQMVLMDT 66
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ + + ++ +A SA+ +++ + + R + D V++L+ G+ A
Sbjct: 67 PGIDVEPRKRMN---QLLTRTAVSALGDADIVCFIVEALR-FDAGDEHVLKLLRASGRPA 122
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+L +NKVD V K LL E Y + SG G L+ L L
Sbjct: 123 ------LLVVNKVDRVGDKSALLPFLEARAQEFDYLGVVPLSGRTGQNLQGLVDEL 172
>gi|238026618|ref|YP_002910849.1| GTPase Era [Burkholderia glumae BGR1]
gi|237875812|gb|ACR28145.1| GTP-binding protein Era [Burkholderia glumae BGR1]
Length = 299
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++N +VG K++ SRK TT H + G+ T D Q DTPG
Sbjct: 14 IAIVGRPNVGKSTLMNALVGQKISITSRKAQTTRHRITGIHTLPDAQYIFVDTPGFQTRH 73
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S ++ + V S ++V + ++ V + R D +V+ LI PPK +
Sbjct: 74 STALNRSLNRTVTSTLTSV---DAILFVIEAGR-FGPDDQKVLDLI-------PPKVPTL 122
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERI 292
L +NK+D + K L +Q L + +
Sbjct: 123 LILNKLDRIHDKSTLFPFLKQMGELRSFAEV 153
>gi|157960866|ref|YP_001500900.1| GTP-binding protein Era [Shewanella pealeana ATCC 700345]
gi|157845866|gb|ABV86365.1| GTP-binding protein Era [Shewanella pealeana ATCC 700345]
Length = 330
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N ++G K++ S+K TT H ++G+ T Q+ DTPGL + +
Sbjct: 39 VAIVGRPNVGKSTLLNKLLGQKISITSKKPQTTRHRIMGIHTDGPRQVVFIDTPGLHMEE 98
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
K R+ + +A +L EV +VVF V +PD ++ R + +K +
Sbjct: 99 -----KRAINRLMNRAAASSLAEVALVVFVVDGMNWTPDD---EMVLRKLQSRDDGRKTI 150
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
L +NKVD + K+ L E+ ++ I S +G ++ +
Sbjct: 151 LAINKVDNIKDKEALFPHLEELSKKFPFDEILPISATQGTNVQRI 195
>gi|91227851|ref|ZP_01262024.1| GTP-binding protein Era [Vibrio alginolyticus 12G01]
gi|269965786|ref|ZP_06179883.1| GTP-binding protein [Vibrio alginolyticus 40B]
gi|91188361|gb|EAS74657.1| GTP-binding protein Era [Vibrio alginolyticus 12G01]
gi|269829654|gb|EEZ83891.1| GTP-binding protein [Vibrio alginolyticus 40B]
Length = 320
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 91/178 (51%), Gaps = 14/178 (7%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+Q + I+G PN GKS+++N ++G K++ SRK TT H ++GV T D Q DT
Sbjct: 22 ENQHCGFIAIVGRPNVGKSTLLNKILGQKISITSRKPQTTRHRIMGVDTDGDYQAIYVDT 81
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQ 253
PGL + + ++ + S+ S VNL V F V H T D V + ++ K
Sbjct: 82 PGLHIEEKRAINRLMNRAANSSLSDVNL-----VFFLVDGTHWTKDDEMV---LTKLQKS 133
Query: 254 APPKQKRVLCMNKVDLVTKKKD-LLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P VLC+NKVD V + D +L +AE K + + + S +G + L +++
Sbjct: 134 NFPV---VLCVNKVDNVQDRNDVMLHMAEMSKKMD-FVDVVPISAKQGKNIDVLRKHV 187
>gi|374583187|ref|ZP_09656281.1| GTP-binding protein Era [Desulfosporosinus youngiae DSM 17734]
gi|374419269|gb|EHQ91704.1| GTP-binding protein Era [Desulfosporosinus youngiae DSM 17734]
Length = 311
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 97/183 (53%), Gaps = 11/183 (6%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
V + + +S V +IG PNAGKS+++N+++G KV +S K TT + + ++T+ QI
Sbjct: 12 VSKSEFRSGFVSVIGRPNAGKSTLLNHLLGQKVLIMSDKPQTTRNRIQCILTEERGQIIF 71
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMG 251
DTPG+ K HK + V +A ++ +V++ + D+ + +I ++++
Sbjct: 72 LDTPGIHKPK----HKLGEFMVGTAKESMREVDVILYMVDLSSDFGPGEEFIIEMLKQT- 126
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
K VL +NKVDL+TK++ ++K+ +QF L ++ I S G L + +
Sbjct: 127 -----KTPCVLALNKVDLLTKEQLMIKI-QQFSKLADFKAIVPISAKTGENTNELLKVIF 180
Query: 312 EQF 314
Q
Sbjct: 181 AQL 183
>gi|345302117|ref|YP_004824019.1| GTP-binding protein Era-like-protein [Rhodothermus marinus
SG0.5JP17-172]
gi|345111350|gb|AEN72182.1| GTP-binding protein Era-like-protein [Rhodothermus marinus
SG0.5JP17-172]
Length = 311
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 93/180 (51%), Gaps = 15/180 (8%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ +S V I+G PN GKS+++N ++G K++ V+ K TT H VLG+++ QI DTP
Sbjct: 22 EHRSGYVAIVGKPNVGKSTLMNALLGHKLSIVTPKPQTTRHRVLGILSGDTYQIVFLDTP 81
Query: 196 GLMLNKSGYS-HKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
G +L K+ Y H+ + V+ A + +L V+F +PD+ I L + A
Sbjct: 82 G-VLKKARYKLHEHMLRTVDRAVADADL-----VLFMAEATQKAPDT--ISLGHLGNRPA 133
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
+L +NK+DLV ++ +L + + + +E + S L G L L + L+ +
Sbjct: 134 ------ILALNKMDLVRNQEQVLPLVDAYMKQYPFEAVVPISALTGYNLDVLLKELIHRL 187
>gi|326692993|ref|ZP_08229998.1| GTPase [Leuconostoc argentinum KCTC 3773]
Length = 303
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V IIG PN GKS+++N +VG K+A +S K TT +++ G+ T + Q+ DTPG
Sbjct: 7 KSGFVAIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDNAQVVFIDTPG- 65
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
++K S D V+ SA+SA++ + + V D D +I ++ + K P
Sbjct: 66 -VHKPQNSLGDFMVK--SAFSALHEADAIWFVVDASMPRGRGDDFIISRLKEV-KDTP-- 119
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKH-LPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
L +NKVDLVT +LL V + ++ P + +F S +G + L ++E ++
Sbjct: 120 --IYLLINKVDLVT-ADELLDVIQSYQEDAPTWAEVFPISATEGDNVPELLGNIVESLEE 176
>gi|440799488|gb|ELR20532.1| ribosome biogenesis GTPase Era, putative [Acanthamoeba castellanii
str. Neff]
Length = 327
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 101/177 (57%), Gaps = 11/177 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMT--KADTQICIFDTPGLML 199
V ++GAPNAGKSS+ N ++ ++V+AVS K TT +V+G++ +TQ+ + DTPG++
Sbjct: 43 VTLLGAPNAGKSSLANALLQSRVSAVSPKAQTTREQVIGILQDKATNTQVVLSDTPGVVP 102
Query: 200 NKSGYSH-KDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP--P 256
+ S+ ++V V + W ++ +V+ VV D R + D + ++ R+ +
Sbjct: 103 PRLQKSYGREVAV---TGWESMQEADVVAVVVDAARKI---DDMTLSIVNRLTRDRSHIN 156
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
+ +L +NK+DLV ++ +L +++ + IF S LKG+GL L YL+ +
Sbjct: 157 ASEILLILNKMDLVEPRERVLPKVDEYNRDNIFNEIFFVSALKGSGLDELKNYLISK 213
>gi|428769032|ref|YP_007160822.1| GTP-binding protein Era-like-protein [Cyanobacterium aponinum PCC
10605]
gi|428683311|gb|AFZ52778.1| GTP-binding protein Era-like-protein [Cyanobacterium aponinum PCC
10605]
Length = 313
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 93/187 (49%), Gaps = 12/187 (6%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
V D KS + IIG PN GKS+++N +VG KVA S TT + + G++T QI
Sbjct: 14 VAPPDFKSGFIAIIGRPNVGKSTLMNELVGQKVAITSPVAQTTRNRLRGILTTPSAQIIF 73
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMG 251
DTPG+ H+ KV V++A SA+N ++++ V D + D + L+ +
Sbjct: 74 VDTPGI----HKPHHELGKVLVQNAVSAINNVDLVLFVVDASQPAGGGDRYITDLLLK-- 127
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
K +L +NK DL KK+ L + Q ++ I S + G GL L Q L+
Sbjct: 128 ----SKTPVILGLNKSDLQGSKKESLNESYQEICQENWQMINF-SAITGEGLDKLQQELI 182
Query: 312 EQFKDLG 318
+ D+G
Sbjct: 183 NKL-DVG 188
>gi|452992448|emb|CCQ96073.1| GTP-binding protein [Clostridium ultunense Esp]
Length = 301
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 93/176 (52%), Gaps = 11/176 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E +KS V +IG PN GKS+++N MVGTK+A +S K TT + + G++T+ + QI DT
Sbjct: 6 EGKKSGFVALIGRPNVGKSTLMNQMVGTKIAIMSDKPQTTRNRIRGILTREEGQIIFLDT 65
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ ++ +KV +S + ++L+++ DV + D ++ ++ G
Sbjct: 66 PGIHKPRTRMGQYMMKVVDQS----IREVDLLLLLIDVEAGIGRGDEEIMNRLK--GTSI 119
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P +L +NK+D + + LL + + +H + I S L G ++ L Q L
Sbjct: 120 PI----ILVLNKIDKIAPEA-LLPLIDHVRHFLSFAEIIPVSALNGNNVEHLIQTL 170
>gi|386585717|ref|YP_006082119.1| GTP-binding protein Era [Streptococcus suis D12]
gi|353737863|gb|AER18871.1| GTP-binding protein Era [Streptococcus suis D12]
Length = 299
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+ +NY++G K+A +S K TT ++++G+ T + QI DTPG+
Sbjct: 4 KSGFVAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTEEEQIVFIDTPGI 63
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ VESA+S + + ++ + D + +ER+ KQA K
Sbjct: 64 HKPKTALG----DFMVESAYSTLREVDTVLFMVPADEKRGKGDDMI---MERL-KQA--K 113
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
+L +NK+D V + LL+ + F+H ++ I S +G + L + L E
Sbjct: 114 VPVILVVNKIDKVHPDQ-LLEQIDDFRHQMDFKEIVPISATQGNNVNRLMEILKENL 169
>gi|254465678|ref|ZP_05079089.1| GTP-binding protein Era [Rhodobacterales bacterium Y4I]
gi|206686586|gb|EDZ47068.1| GTP-binding protein Era [Rhodobacterales bacterium Y4I]
Length = 301
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N MVG KV+ V+ K TT + GV + D Q+ DTPGL +
Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGDAQLVFVDTPGLFKPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW +V++++ + HR +T ++ + +G+ +
Sbjct: 68 RRLD----RAMVAAAWGGAADADVVVLMVEAHRGITEGVETILEGLAEIGE----GRTVA 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V +K LL +A+ + FM S +G G+ L ++L
Sbjct: 120 LAINKIDKVPAEK-LLGLAQDLNRRYAFAETFMISAERGHGVDDLRKWL 167
>gi|339452212|ref|ZP_08655582.1| GTPase [Leuconostoc lactis KCTC 3528]
Length = 303
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V IIG PN GKS+++N +VG K+A +S K TT +++ G+ T + Q+ DTPG
Sbjct: 7 KSGFVAIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDNAQVVFIDTPG- 65
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
++K S D V+ SA+SA++ + + V D D +I ++ + K P
Sbjct: 66 -VHKPQNSLGDFMVK--SAFSALHEADAIWFVVDASMPRGRGDDFIISRLKEV-KDTP-- 119
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKH-LPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
L +NKVDLVT +LL V + ++ P + +F S +G + L ++E ++
Sbjct: 120 --IYLLINKVDLVT-SDELLDVIQSYQEDAPTWAEVFPISATEGDNVPELLGNIVETLEE 176
>gi|321473698|gb|EFX84665.1| hypothetical protein DAPPUDRAFT_194445 [Daphnia pulex]
Length = 406
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 98/190 (51%), Gaps = 22/190 (11%)
Query: 98 LRIFQEEEEERKHRALAKAL-----LQAALERQEEEEEEVKEEDQKSVAVGIIGAPNAGK 152
LR F +E R+ ++ + +Q+ L R E + + + V I+G PNAGK
Sbjct: 24 LRYFSQESPSLGFRSPSQRIPSTPAIQSELVRTPSE----YVKGSRVLQVAILGIPNAGK 79
Query: 153 SSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLML---NKSGYSHKDV 209
S+++N + G + +VSRK +TT V+ + +TQI DTPGL+L K K
Sbjct: 80 STLVNQLSGWQTCSVSRKVHTTKKMSKTVLIRDETQIVFLDTPGLVLPAEAKQFNLDKSF 139
Query: 210 KVRVESAWSAVNLFEVLMVVFDVHRHLT--SPDSRVIRLIERMGKQAPPKQKRVLCMNKV 267
+ E A S NL L+V+ D+ T S S+++RL+ P ++ VL +NK+
Sbjct: 140 VIDPEVALSKANL---LLVLHDISNKWTRGSLSSKILRLLHLY-----PDKESVLVLNKI 191
Query: 268 DLVTKKKDLL 277
DL+ +K+ LL
Sbjct: 192 DLLKEKRLLL 201
>gi|270291317|ref|ZP_06197539.1| GTP-binding protein Era [Pediococcus acidilactici 7_4]
gi|304385067|ref|ZP_07367413.1| GTP-binding protein Era [Pediococcus acidilactici DSM 20284]
gi|418069351|ref|ZP_12706629.1| GTPase [Pediococcus acidilactici MA18/5M]
gi|427441999|ref|ZP_18925497.1| GTP-binding protein Era [Pediococcus lolii NGRI 0510Q]
gi|270280163|gb|EFA25999.1| GTP-binding protein Era [Pediococcus acidilactici 7_4]
gi|304329261|gb|EFL96481.1| GTP-binding protein Era [Pediococcus acidilactici DSM 20284]
gi|357536820|gb|EHJ20848.1| GTPase [Pediococcus acidilactici MA18/5M]
gi|425786867|dbj|GAC46285.1| GTP-binding protein Era [Pediococcus lolii NGRI 0510Q]
Length = 304
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 91/175 (52%), Gaps = 14/175 (8%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL--ML 199
V I+G PN GKS+ +NY+VG KVA +S TT +++ G+ T QI DTPG+
Sbjct: 13 VAIVGRPNVGKSTFLNYVVGQKVAIMSDVPQTTRNKIQGIYTTDREQIVFIDTPGIHKAH 72
Query: 200 NKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQK 259
NK G V+SA S++N + +M + + + + D+ +I ++++ K P
Sbjct: 73 NKLG------DFMVQSAISSLNEVDAVMFMVNADQKRGAGDNYIIERLKKI-KNRP---- 121
Query: 260 RVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+DLV +LL + + ++ + +F S L+G + L L +Q
Sbjct: 122 IYLVINKIDLV-HPDELLPIVDSYRDALDWTEVFPISALQGNNINELLATLSKQM 175
>gi|107022211|ref|YP_620538.1| GTP-binding protein Era [Burkholderia cenocepacia AU 1054]
gi|116689157|ref|YP_834780.1| GTP-binding protein Era [Burkholderia cenocepacia HI2424]
gi|254245910|ref|ZP_04939231.1| GTP-binding protein Era [Burkholderia cenocepacia PC184]
gi|105892400|gb|ABF75565.1| GTP-binding protein Era [Burkholderia cenocepacia AU 1054]
gi|116647246|gb|ABK07887.1| GTP-binding protein Era [Burkholderia cenocepacia HI2424]
gi|124870686|gb|EAY62402.1| GTP-binding protein Era [Burkholderia cenocepacia PC184]
Length = 299
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++N +VG K++ SRK TT H + G+ T D Q DTPG
Sbjct: 14 IAIVGRPNVGKSTLMNALVGQKISITSRKAQTTRHRITGINTFDDAQFVFVDTPGFQTRH 73
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S ++ + V S ++V+ V++ V + R D +V+ LI PP +
Sbjct: 74 STALNRSLNRAVTSTLTSVD---VILFVIEAGR-FGPDDQKVLDLI-------PPGMPTL 122
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
L NK+D V K L ++ L + + S K +K L
Sbjct: 123 LIANKIDRVNDKATLFPFMQKVSELREFTELVPLSAQKPEDIKRL 167
>gi|163750601|ref|ZP_02157838.1| GTP-binding protein Era [Shewanella benthica KT99]
gi|161329596|gb|EDQ00587.1| GTP-binding protein Era [Shewanella benthica KT99]
Length = 335
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 86/165 (52%), Gaps = 8/165 (4%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N ++G K++ S+K TT H ++G+ T A+ Q+ DTPGL +++
Sbjct: 44 VAIVGRPNVGKSTLLNKLLGQKISITSKKPQTTRHRIMGIHTVAERQVVFIDTPGLHMDE 103
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ R+ + +A +L EV +V+F V + D L+ R + +K V
Sbjct: 104 RRAIN-----RLMNRAAASSLAEVSLVIFVVDGMTWTEDD---DLVLRKLQSRDDGRKTV 155
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
L +NKVD + K+ L E ++ I S KG ++ +
Sbjct: 156 LAVNKVDNIKNKELLFPYLEALSKKFPFDEILPISATKGTNVQRI 200
>gi|323703320|ref|ZP_08114970.1| GTP-binding protein Era [Desulfotomaculum nigrificans DSM 574]
gi|333924043|ref|YP_004497623.1| GTP-binding protein Era-like-protein [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323531683|gb|EGB21572.1| GTP-binding protein Era [Desulfotomaculum nigrificans DSM 574]
gi|333749604|gb|AEF94711.1| GTP-binding protein Era-like-protein [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 302
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 94/182 (51%), Gaps = 15/182 (8%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E +S V ++G PN GKS+++N +VG KVA +S K TT H++ V+++ D QI DT
Sbjct: 6 EGYRSGFVALVGRPNVGKSTLLNKLVGQKVAIMSDKPQTTRHKIHSVLSRNDAQIVFLDT 65
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ + HK + V+ A A L EV +V+F V T P R I K+
Sbjct: 66 PGIHKPR----HKLGEYMVDVALGA--LKEVDVVLFLVEA--TGPPGAGDRYIAEQLKEI 117
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL----TQYL 310
K L +NKVDLV KK+++L+ +K L + + S L G + L QYL
Sbjct: 118 --KTPVFLLINKVDLV-KKEEVLERIVSYKDLLDFAEVVPVSALAGENVDRLVDTIVQYL 174
Query: 311 ME 312
E
Sbjct: 175 PE 176
>gi|260775207|ref|ZP_05884105.1| GTP-binding protein Era [Vibrio coralliilyticus ATCC BAA-450]
gi|260608908|gb|EEX35070.1| GTP-binding protein Era [Vibrio coralliilyticus ATCC BAA-450]
Length = 324
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 77/144 (53%), Gaps = 12/144 (8%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+Q V I+G PN GKS+++N ++G K++ SRK TT H ++GV T+ D Q DT
Sbjct: 26 ENQHCGFVAIVGRPNVGKSTLLNRILGQKISITSRKPQTTRHRIMGVDTEGDYQAIYVDT 85
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQ 253
PGL + + ++ + S+ S VNL V F V H T D V + ++ K
Sbjct: 86 PGLHIEEKRAINRLMNRAANSSLSDVNL-----VFFLVDGTHWTKDDEMV---LTKLQKS 137
Query: 254 APPKQKRVLCMNKVDLVTKKKDLL 277
P VLC+NKVD V + D++
Sbjct: 138 NFPV---VLCVNKVDNVQDRNDVM 158
>gi|365902690|ref|ZP_09440513.1| GTPase [Lactobacillus malefermentans KCTC 3548]
Length = 301
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 93/177 (52%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS + IIG PN GKS+ +N +VG KVA +S K TT +++ G+ T + QI DTPG+
Sbjct: 7 KSGFLAIIGRPNVGKSTFLNRVVGQKVAIMSDKAQTTRNKIQGIYTTDEAQIVFIDTPGV 66
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ V+SA S++N + ++ + + + D+ +I ++ + K
Sbjct: 67 HKPKNQLG----DFMVKSALSSLNEVDAVLFMVNADEKRGAGDNFIIDRLKTV------K 116
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
+ L +NK+D V DL+ + +QFK+ ++ ++ S L+G + L L++
Sbjct: 117 KPIYLVINKIDQV-HPDDLIVIVDQFKNALDWKEVYPISALEGNNVNELLNKLVDNL 172
>gi|301300995|ref|ZP_07207158.1| GTP-binding protein Era [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300851411|gb|EFK79132.1| GTP-binding protein Era [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 300
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 11/170 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+ +N +VG K+A +S K TT +++ G+ T+ D QI DTPG+
Sbjct: 10 VAILGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGIYTEDDAQIVFIDTPGIHKPH 69
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S VESA S +N + ++ + + + D + IER+ P
Sbjct: 70 SRLG----DFMVESALSTLNEVDAVLFMVNATQKRGRGDDFI---IERLKNVKKPI---Y 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
L +NK+D + K LL++ + +++ Y +F S L+G L + L+
Sbjct: 120 LVINKIDQIHPDK-LLQIMDDYRNTLDYAEVFPISALEGNNCPELIESLV 168
>gi|212558006|gb|ACJ30460.1| Small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Shewanella piezotolerans WP3]
Length = 330
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 10/172 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N ++G K++ S+K TT H ++G+ T Q+ DTPGL + +
Sbjct: 39 VAIVGRPNVGKSTLLNKLLGQKISITSKKPQTTRHRIMGIHTDGPRQVVFIDTPGLHMEE 98
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAPPKQKR 260
K R+ + +A +L EV +VVF V + T+ D V+R ++ +K
Sbjct: 99 -----KRAINRLMNRAAASSLAEVSLVVFVVDGMNWTADDEMVLRKLQSRND----GRKT 149
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
VL +NKVD + K+ L E+ ++ I S +G ++ + +E
Sbjct: 150 VLAINKVDNIKDKEALFPHLEELSKKFEFDEILPISATQGTNVQRILDMSVE 201
>gi|15603995|ref|NP_220510.1| GTP-binding protein Era [Rickettsia prowazekii str. Madrid E]
gi|383486965|ref|YP_005404645.1| GTPase Era [Rickettsia prowazekii str. GvV257]
gi|383487541|ref|YP_005405220.1| GTPase Era [Rickettsia prowazekii str. Chernikova]
gi|383488387|ref|YP_005406065.1| GTPase Era [Rickettsia prowazekii str. Katsinyian]
gi|383489230|ref|YP_005406907.1| GTPase Era [Rickettsia prowazekii str. Dachau]
gi|383499365|ref|YP_005412726.1| GTPase Era [Rickettsia prowazekii str. BuV67-CWPP]
gi|383500205|ref|YP_005413565.1| GTPase Era [Rickettsia prowazekii str. RpGvF24]
gi|386081947|ref|YP_005998524.1| GTP-binding protein Era [Rickettsia prowazekii str. Rp22]
gi|6225298|sp|Q9ZE30.1|ERA_RICPR RecName: Full=GTPase Era
gi|3860686|emb|CAA14587.1| GTP-BINDING PROTEIN ERA (era) [Rickettsia prowazekii str. Madrid E]
gi|292571711|gb|ADE29626.1| GTP-binding protein Era [Rickettsia prowazekii str. Rp22]
gi|380757330|gb|AFE52567.1| GTPase Era [Rickettsia prowazekii str. GvV257]
gi|380757902|gb|AFE53138.1| GTPase Era [Rickettsia prowazekii str. RpGvF24]
gi|380760420|gb|AFE48942.1| GTPase Era [Rickettsia prowazekii str. Chernikova]
gi|380761266|gb|AFE49787.1| GTPase Era [Rickettsia prowazekii str. Katsinyian]
gi|380762111|gb|AFE50631.1| GTPase Era [Rickettsia prowazekii str. BuV67-CWPP]
gi|380762953|gb|AFE51472.1| GTPase Era [Rickettsia prowazekii str. Dachau]
Length = 295
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 92/174 (52%), Gaps = 12/174 (6%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QK+++V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQI ++DTPG
Sbjct: 6 QKTISVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIVTLKDTQIILYDTPG 65
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ K K V AWS+V ++++ + D + L + ++ + P
Sbjct: 66 IFEPKGMLE----KAMVRCAWSSVYSADLVLSIIDSLKPLDNIAHNILNQFCLLN-IVP- 119
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ +NK+D+ +K + +K + H P +F S L G + L +Y+
Sbjct: 120 ----IFLLNKIDIESKYLNDIKAFLKITH-PK-SLLFPISALLGKNVDVLLEYI 167
>gi|114564092|ref|YP_751606.1| GTP-binding protein Era [Shewanella frigidimarina NCIMB 400]
gi|114335385|gb|ABI72767.1| GTP-binding protein Era [Shewanella frigidimarina NCIMB 400]
Length = 334
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 10/166 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N ++G KV+ S+K TT H ++G+ T +QI DTPGL + +
Sbjct: 43 VAIVGRPNVGKSTLLNKLLGQKVSITSKKPQTTRHRIMGIHTDGPSQIIFIDTPGLHIEE 102
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAPPKQKR 260
K R+ + +A +L +V MV+F V T+ D V++ I+ +K
Sbjct: 103 -----KRAINRLMNRAAASSLADVAMVIFVVDGMTWTADDEMVLQKIQHRNDD----RKI 153
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
+L +NKVD + K+ L + ++ I S KG ++ +
Sbjct: 154 ILAINKVDNIKDKESLFPYLTELAKKFDFDEILPISASKGTNVQRI 199
>gi|27364935|ref|NP_760463.1| GTPase Era [Vibrio vulnificus CMCP6]
gi|37681014|ref|NP_935623.1| GTP-binding protein Era [Vibrio vulnificus YJ016]
gi|320155321|ref|YP_004187700.1| GTP-binding protein Era [Vibrio vulnificus MO6-24/O]
gi|31340056|sp|Q8DC75.1|ERA_VIBVU RecName: Full=GTPase Era
gi|61212428|sp|Q7MHN9.1|ERA_VIBVY RecName: Full=GTPase Era
gi|27361081|gb|AAO09990.1| GTP-binding protein Era [Vibrio vulnificus CMCP6]
gi|37199764|dbj|BAC95594.1| GTP-binding protein Era [Vibrio vulnificus YJ016]
gi|319930633|gb|ADV85497.1| GTP-binding protein Era [Vibrio vulnificus MO6-24/O]
Length = 320
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 128 EEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADT 187
E++ E+Q + I+G PN GKS+++N ++G K++ SRK TT H ++GV T D
Sbjct: 15 EKKSTSSENQHCGFIAIVGRPNVGKSTLLNKILGQKISITSRKPQTTRHRIMGVDTDGDY 74
Query: 188 QICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRL 246
Q DTPGL + + ++ + S+ S VNL V F V H T+ D V
Sbjct: 75 QAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNL-----VFFLVDGTHWTNDDEMV--- 126
Query: 247 IERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
+ ++ K P VLC+NKVD V + ++++ + + + S +G + L
Sbjct: 127 LNKLQKANFPV---VLCVNKVDNVQDRNEVMQHMMEMSKKMNFVDVVPISAKQGKNIDVL 183
Query: 307 TQYLMEQF 314
+++ +
Sbjct: 184 RKHVRDHL 191
>gi|308180766|ref|YP_003924894.1| GTP-binding protein Era [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|308046257|gb|ADN98800.1| GTP-binding protein Era [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 302
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 11/173 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIG PN GKS+++N +VG KVA +S K TT + + G+ T ADTQ+ DTPG+
Sbjct: 12 VAIIGRPNVGKSTLLNRVVGQKVAIMSDKAQTTRNRIQGIYTTADTQMVFIDTPGIHKPH 71
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S V+SA S + + ++ + + + D+ +I ++ + KQ
Sbjct: 72 SRLG----DFMVKSALSTLGEVDAVLFMINADERRGAGDNFIIDRLKTV------KQPIY 121
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+D V LL++ +Q+K ++ ++ S L+G + L L Q
Sbjct: 122 LVINKIDQV-HPNHLLEIMDQYKDALPWKEVYPISALEGNNVDELLTTLKGQL 173
>gi|302878421|ref|YP_003846985.1| GTP-binding protein Era [Gallionella capsiferriformans ES-2]
gi|302581210|gb|ADL55221.1| GTP-binding protein Era [Gallionella capsiferriformans ES-2]
Length = 303
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 11/156 (7%)
Query: 127 EEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKAD 186
EE ++ +S + I+G PN GKS+++N+++G K++ SRK TT H + G+ T
Sbjct: 3 EETTNAPDDSYRSGYIAIVGRPNVGKSTLLNHLIGQKISITSRKAQTTRHRINGIYTDDH 62
Query: 187 TQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRL 246
+Q DTPG L ++ + V S+ V +V+M V + R+ D V++L
Sbjct: 63 SQFVFVDTPGFQLKHLNALNRGMNRVVTSSLRDV---QVVMYVLEALRY-DERDQEVLKL 118
Query: 247 IERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQ 282
+ P + +L +NK+D V K L AE+
Sbjct: 119 L-------PDNRPVLLVINKIDEVADKGQLFDFAER 147
>gi|172037536|ref|YP_001804037.1| GTP-binding protein Era [Cyanothece sp. ATCC 51142]
gi|354553583|ref|ZP_08972889.1| GTP-binding protein Era [Cyanothece sp. ATCC 51472]
gi|254783295|sp|B1WT49.1|ERA_CYAA5 RecName: Full=GTPase Era
gi|171698990|gb|ACB51971.1| GTP-binding protein [Cyanothece sp. ATCC 51142]
gi|353554300|gb|EHC23690.1| GTP-binding protein Era [Cyanothece sp. ATCC 51472]
Length = 314
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 95/186 (51%), Gaps = 14/186 (7%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
+ E KS VGIIG PN GKS+++N ++G K+A S + TT + + G++T QI
Sbjct: 15 IAPEGFKSGFVGIIGRPNVGKSTLMNQLIGQKIAITSPVSQTTRNRLQGILTTDKAQIIF 74
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMG 251
DTPG+ H K+ V++A +A+N +++++V D D +I L++ +
Sbjct: 75 VDTPGI----HKPHHTLGKIIVKNAKTAINSVDIILLVVDSSVKSGGGDRYIIDLLKTV- 129
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMT--SGLKGAGLKALTQY 309
Q +L +NK D T+K ++ E + +L M S L G G++ L
Sbjct: 130 -----NQPVILGLNKSDQQTEKYQ--EIDESYANLIQDHNWPMIKFSALTGDGVETLQNT 182
Query: 310 LMEQFK 315
L+EQ +
Sbjct: 183 LIEQLE 188
>gi|126657428|ref|ZP_01728587.1| GTP-binding protein Era [Cyanothece sp. CCY0110]
gi|126621415|gb|EAZ92127.1| GTP-binding protein Era [Cyanothece sp. CCY0110]
Length = 314
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 92/182 (50%), Gaps = 14/182 (7%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E KS VGIIG PN GKS+++N ++G K+A S + TT + + G++T QI DT
Sbjct: 18 EGFKSGFVGIIGRPNVGKSTLMNQLIGQKIAITSPVSQTTRNRLQGILTTEQAQIIFVDT 77
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ H K+ V++A A+N +V++ V D D +I L++ +
Sbjct: 78 PGI----HKPHHTLGKIIVKNAKMAINSVDVILFVVDSSVKSGGGDRYIIDLLKTI---- 129
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHL--PGYERIFMTSGLKGAGLKALTQYLME 312
Q +L +NK D + +D ++ E + +L + I S L G GL+ L L+E
Sbjct: 130 --NQPVILGLNKQD--QQSEDYQQIDESYTNLIESYHWPIIKFSALTGNGLETLQNTLIE 185
Query: 313 QF 314
+
Sbjct: 186 KL 187
>gi|410659181|ref|YP_006911552.1| GTP-binding protein Era [Dehalobacter sp. DCA]
gi|410662166|ref|YP_006914537.1| GTP-binding protein Era [Dehalobacter sp. CF]
gi|409021536|gb|AFV03567.1| GTP-binding protein Era [Dehalobacter sp. DCA]
gi|409024522|gb|AFV06552.1| GTP-binding protein Era [Dehalobacter sp. CF]
Length = 305
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 90/177 (50%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG PNAGKS+++N ++G KV +S K T + + ++T+ QI FDTPG+
Sbjct: 10 RSGFVAVIGRPNAGKSTLLNTLLGQKVLIISDKPQATRNRIRCILTEERGQIIFFDTPGI 69
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K H+ + V +A S + + + V DV S D V+++I+ G
Sbjct: 70 HKPK----HRLGEYMVAAAKSTLQGVDFAICVVDVSVPFGSGDEYVLQVIKDSGVPC--- 122
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
+L +NK+DL++K + L K+A+ F + ++ I S L+ L + E
Sbjct: 123 ---ILALNKIDLISKDQLLEKIAD-FAKIADFKEIVPISALQSENTTKLMDLIFEAL 175
>gi|171322522|ref|ZP_02911315.1| GTP-binding protein Era [Burkholderia ambifaria MEX-5]
gi|171092149|gb|EDT37557.1| GTP-binding protein Era [Burkholderia ambifaria MEX-5]
Length = 287
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++N +VG K++ SRK TT H + G+ T D Q DTPG
Sbjct: 2 IAIVGRPNVGKSTLMNALVGQKISITSRKAQTTRHRITGINTFDDAQFVFVDTPGFQTRH 61
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S ++ + V S ++V+ V++ V + R D +V+ LI PP +
Sbjct: 62 STALNRSLNRAVTSTLTSVD---VILFVIEAGR-FGPDDQKVLDLI-------PPGMPTL 110
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHL 286
L NK+D V K L ++ L
Sbjct: 111 LIANKIDRVNDKATLFPFMQKVSEL 135
>gi|126733740|ref|ZP_01749487.1| GTP-binding protein Era [Roseobacter sp. CCS2]
gi|126716606|gb|EBA13470.1| GTP-binding protein Era [Roseobacter sp. CCS2]
Length = 305
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
K+ V +IG PNAGKS+++N MVG KV+ V+ K TT + GV + Q+ DTPGL
Sbjct: 7 KAGFVALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMAENAQLIFIDTPGL 66
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIR-LIERMGKQAPP 256
+ + + +AW +V++++ + HR +T ++ L ER GK
Sbjct: 67 FKPRRRLD----RAMIAAAWGGAADADVVVLMIEAHRGVTDGVKAILETLSERAGKSPV- 121
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
L +NK+D V K + LL + +Q + FM S +G G AL +L Q
Sbjct: 122 ----ALAINKIDKV-KSEVLLALTQQMNDAYPFAETFMISAERGHGCDALRDWLTTQ 173
>gi|227892551|ref|ZP_04010356.1| GTP-binding protein Era [Lactobacillus ultunensis DSM 16047]
gi|227865672|gb|EEJ73093.1| GTP-binding protein Era [Lactobacillus ultunensis DSM 16047]
Length = 301
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 91/176 (51%), Gaps = 14/176 (7%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
++E+D KS V +IG PN GKS+++NY+VG KVA S K TT + + G+ T Q+
Sbjct: 1 MEEKDFKSGFVALIGRPNVGKSTLMNYLVGQKVAITSNKPQTTRNRISGIYTSNKMQVVF 60
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERM 250
DTPG+ H + ++ A S +L +V +V+F V + D + L++ +
Sbjct: 61 VDTPGIF-----KPHSKLDDYMDKA-SLSSLNDVDLVLFMVEPEEIGKGDQYIADLLKEV 114
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
K L +NKVD + K LL + + + L G++ I S +G G++ L
Sbjct: 115 ------KVPVFLVINKVDQIHPNK-LLPIMDSYHKLEGFKEILPISATQGIGIEDL 163
>gi|395007834|ref|ZP_10391534.1| GTP-binding protein Era [Acidovorax sp. CF316]
gi|394314135|gb|EJE51080.1| GTP-binding protein Era [Acidovorax sp. CF316]
Length = 336
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 11/142 (7%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E Q+ + I+G PN GKS+++N +VG K++ SRK TT H + G+ T+ TQ DT
Sbjct: 39 EGQRCGVIAIVGKPNVGKSTLLNALVGQKISITSRKAQTTRHRITGIRTREQTQFVFVDT 98
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG + +K + V A V+L +L VV + T D++V+ L +
Sbjct: 99 PGFQTRHATALNKSLNKTVMGAIGDVDL--ILFVV--EAGNFTLADAKVLSLFK------ 148
Query: 255 PPKQKRVLCMNKVDLVTKKKDL 276
P +L NK+D+V ++ +L
Sbjct: 149 -PGIPTLLIANKLDMVNRRAEL 169
>gi|254556825|ref|YP_003063242.1| GTP-binding protein Era [Lactobacillus plantarum JDM1]
gi|300768138|ref|ZP_07078043.1| GTP-binding protein Era [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|380032744|ref|YP_004889735.1| ribosome biogenesis GTPase, Era subfamily [Lactobacillus plantarum
WCFS1]
gi|418275504|ref|ZP_12890827.1| ribosome biogenesis GTPase, Era subfamily [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448821472|ref|YP_007414634.1| GTPase Era [Lactobacillus plantarum ZJ316]
gi|38257324|sp|Q88VS0.1|ERA_LACPL RecName: Full=GTPase Era
gi|254045752|gb|ACT62545.1| GTP-binding protein Era [Lactobacillus plantarum JDM1]
gi|300494202|gb|EFK29365.1| GTP-binding protein Era [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|342241987|emb|CCC79221.1| ribosome biogenesis GTPase, Era subfamily [Lactobacillus plantarum
WCFS1]
gi|376009055|gb|EHS82384.1| ribosome biogenesis GTPase, Era subfamily [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448274969|gb|AGE39488.1| GTPase Era [Lactobacillus plantarum ZJ316]
Length = 302
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 11/173 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIG PN GKS+++N +VG KVA +S K TT + + G+ T ADTQ+ DTPG+
Sbjct: 12 VAIIGRPNVGKSTLLNRVVGQKVAIMSDKAQTTRNRIQGIYTTADTQMVFIDTPGIHKPH 71
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S V+SA S + + ++ + + + D+ +I ++ + KQ
Sbjct: 72 SRLG----DFMVKSALSTLGEVDAVLFMINADERRGAGDNFIIDRLKTV------KQPIY 121
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+D V LL++ +Q+K ++ ++ S L+G + L L Q
Sbjct: 122 LVINKIDQV-HPDHLLEIMDQYKDALPWKEVYPISALEGNNVDELLTTLKGQL 173
>gi|90961872|ref|YP_535788.1| GTP-binding protein Era [Lactobacillus salivarius UCC118]
gi|385840478|ref|YP_005863802.1| Like GTP-binding protein [Lactobacillus salivarius CECT 5713]
gi|122449031|sp|Q1WTU6.1|ERA_LACS1 RecName: Full=GTPase Era
gi|90821066|gb|ABD99705.1| GTP-binding protein [Lactobacillus salivarius UCC118]
gi|300214599|gb|ADJ79015.1| Like GTP-binding protein [Lactobacillus salivarius CECT 5713]
Length = 300
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 11/170 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+ +N +VG K+A +S K TT +++ G+ T+ D QI DTPG+
Sbjct: 10 VAILGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGIYTEDDAQIVFIDTPGIHKPH 69
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S VESA S +N + ++ + + + D + IER+ P
Sbjct: 70 SRLG----DFMVESALSTLNEVDAVLFMVNATQKRGRGDDFI---IERLKNVKKPI---Y 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
L +NK+D + K LL++ + +++ Y +F S L+G L + L+
Sbjct: 120 LVINKIDQIHPDK-LLQIMDDYRNTLDYAEVFPISALEGNNCPELIESLV 168
>gi|420252223|ref|ZP_14755364.1| GTP-binding protein Era [Burkholderia sp. BT03]
gi|398056015|gb|EJL48047.1| GTP-binding protein Era [Burkholderia sp. BT03]
Length = 287
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N +VG KV+ SRK TT H + G+ T D Q DTPG
Sbjct: 2 VAIVGRPNVGKSTLMNALVGQKVSITSRKAQTTRHRITGINTIDDAQYVFVDTPGFQTRH 61
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S ++ + V S S+V+ V+F + PD + ++++ + K AP +
Sbjct: 62 SSALNRSLNRAVTSTLSSVD-----AVLFVIEAGRFGPDDQ--KVLDLIPKSAPT----L 110
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERI 292
L NK+D V K L +Q L ++ I
Sbjct: 111 LIANKLDRVNDKDSLFPFMQQMSALREFKEI 141
>gi|308069928|ref|YP_003871533.1| GTP-binding protein [Paenibacillus polymyxa E681]
gi|305859207|gb|ADM70995.1| GTP-binding protein, era-like (Bex protein) [Paenibacillus polymyxa
E681]
Length = 300
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 11/171 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N+++G K+A +S K TT +++ GV T DTQI DTPG+
Sbjct: 7 KSGFVAIVGRPNVGKSTLMNHVIGQKIAIMSDKPQTTRNKIHGVFTTEDTQIVFLDTPGI 66
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+S ++A++ + E ++ + D L D R I KQ K
Sbjct: 67 HKRQSKLG----DYMNQTAFNTLGEVEAVLFLIDAAEGLGGGD----RFIAEQLKQV--K 116
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
+L +NK+D + + + LL + EQ++ L + I S G + L +
Sbjct: 117 TPVILVLNKIDRI-EPEALLPLIEQYRKLYDFAEIIPISAKMGNNVNTLLE 166
>gi|384132809|ref|YP_005515421.1| era [Acinetobacter baumannii 1656-2]
gi|322509029|gb|ADX04483.1| era [Acinetobacter baumannii 1656-2]
Length = 340
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 91/175 (52%), Gaps = 10/175 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ + Q DTP
Sbjct: 34 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSCEKMQAVYVDTP 93
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D + + D ++E++
Sbjct: 94 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVIDAQKWTQNDD----LVLEKLKNADM 146
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P +L +NK D K+++L + ++ L + I S L+GA L+ L++ +
Sbjct: 147 P---VILVINKADTFGDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETI 198
>gi|366053203|ref|ZP_09450925.1| GTPase Era [Lactobacillus suebicus KCTC 3549]
Length = 301
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V +IG PN GKS+++N ++G KVA +S TT +++ G+ T D QI DTPG
Sbjct: 7 KSGFVALIGRPNVGKSTLLNQVIGQKVAIMSNVAQTTRNKIQGIYTSNDAQIVFIDTPG- 65
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
++K D R SA SA++ + ++ V + + + D+ + IER+ K P
Sbjct: 66 -IHKPQTKLGDFMER--SALSALDEVDAILFVVNATENKGAGDNFI---IERLKKVHQPI 119
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+D V K + LL + Q++ Y++I S L G + L + L+
Sbjct: 120 ---YLVINKIDQV-KPERLLDIKAQYEQSLDYQKIVPISALNGNNVDQLIEELVNHL 172
>gi|385812271|ref|YP_005848662.1| GTP-binding protein Era [Lactobacillus fermentum CECT 5716]
gi|299783168|gb|ADJ41166.1| GTP-binding protein Era [Lactobacillus fermentum CECT 5716]
Length = 301
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 94/182 (51%), Gaps = 21/182 (11%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V +IG PN GKS+++NYMVG KVA +S TT +++ G+ T + QI DTPG+
Sbjct: 7 KSGFVALIGRPNVGKSTLLNYMVGQKVAIMSNVAQTTRNKIQGIYTSDEAQIVFIDTPGI 66
Query: 198 MLNKSGYSHKDVKVRV-----ESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGK 252
HK + R+ SA SA++ + ++ V + + D+ + IER+ K
Sbjct: 67 --------HKP-QTRLGXFMERSALSALDEVDAILFVVPANEKRGAGDNFI---IERLKK 114
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
+Q L +NK+D V DL + Q++ ++++ S L+G + L L++
Sbjct: 115 V---QQPIYLVVNKIDQVN-PNDLPDIIAQYEGALPFKKVVPVSALQGNNVNTLINDLVD 170
Query: 313 QF 314
Q
Sbjct: 171 QL 172
>gi|418005222|ref|ZP_12645218.1| GTP-binding protein [Lactobacillus casei UW1]
gi|410547475|gb|EKQ21708.1| GTP-binding protein [Lactobacillus casei UW1]
Length = 300
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 13/174 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIG PN GKS+ +N ++G K+A +S K TT +++ G+ T D QI DTPG+ K
Sbjct: 9 VAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPGIHKPK 68
Query: 202 SGY-SHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKR 260
+ ++ D ++A S +N + ++ + + D ++R + A K+
Sbjct: 69 NELDTYMD-----KAALSTLNQVDAILFMVEADEEKGPGDGYIMR------QLAEVKKPV 117
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+DLV K DLL + E ++H ++++F S G + L L +
Sbjct: 118 YLIINKIDLV-KPDDLLPLIESYQHDYAFDQVFPISATMGNNVDELLTALTDAL 170
>gi|239618466|ref|YP_002941788.1| GTP-binding protein Era [Kosmotoga olearia TBF 19.5.1]
gi|239507297|gb|ACR80784.1| GTP-binding protein Era [Kosmotoga olearia TBF 19.5.1]
Length = 305
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 95/182 (52%), Gaps = 17/182 (9%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D +S V ++G PN GKSS++N +VG KVA VS K TT + + G++T Q+ +DTP
Sbjct: 6 DYRSGIVSLVGKPNVGKSSLVNQLVGEKVAIVSDKVQTTRNRIGGIVTTERGQVIFYDTP 65
Query: 196 GLM--LNK-SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGK 252
G+ L+K GY VK+ V SA+N +++ + D+ + D V + +
Sbjct: 66 GIHKPLHKLGGYL---VKITV----SALNGSDLIAAILDISDGIKKSDFLVAKHVN--SS 116
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQ-FKHLPGYERIFMTSGLKGAGLKALTQYLM 311
P L +NK+D+V +K + + E+ K E+ F S + G G+K + ++
Sbjct: 117 NIPV----FLVINKIDVVKTRKKITEFLEEGTKLFKNVEKTFPVSAITGEGIKEFLEAVI 172
Query: 312 EQ 313
E+
Sbjct: 173 ER 174
>gi|332022772|gb|EGI63045.1| DNA ligase 1 [Acromyrmex echinatior]
Length = 914
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 10/189 (5%)
Query: 124 RQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMT 183
+ E + E +KS+ + +GAPN GKS+++N ++ + VS K +TT + +
Sbjct: 38 QSNENHTSIHREAEKSLKIAFLGAPNVGKSTLVNQLIKRSICPVSCKVHTTQTKAHAIYC 97
Query: 184 KADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLT--SPDS 241
+ DTQ+ DTPG++ K + +++N+ +++ +V + T DS
Sbjct: 98 EGDTQLIFMDTPGMVSLTESKKFKLADSFRKDQKTSLNMADIIGIVQNAENIYTRHKIDS 157
Query: 242 RVIRLI-ERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQF---KHLPGYERIFMTSG 297
++ L+ E + K+ P +L +NKVD + KK+ LL K P + +FM S
Sbjct: 158 NILELLTEDIKKKIPI----ILVINKVDRIKKKEILLDFVYTLTKSKKSPDFCDVFMISA 213
Query: 298 LKGAGLKAL 306
L G G+ L
Sbjct: 214 LTGDGVDDL 222
>gi|167623018|ref|YP_001673312.1| GTP-binding protein Era [Shewanella halifaxensis HAW-EB4]
gi|167353040|gb|ABZ75653.1| GTP-binding protein Era [Shewanella halifaxensis HAW-EB4]
Length = 330
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N ++G K++ S+K TT H ++G+ T Q+ DTPGL + +
Sbjct: 39 VAIVGRPNVGKSTLLNKLLGQKISITSKKPQTTRHRIMGIHTDGPRQVVFIDTPGLHMEE 98
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
K R+ + +A +L EV +V+F V +PD ++ R + +K +
Sbjct: 99 -----KRAINRLMNRAAASSLAEVALVIFVVDGMNWTPDD---EMVLRKLQSRDDGRKTI 150
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
L +NKVD + K+ L E+ ++ I S +G ++ +
Sbjct: 151 LAINKVDNIKDKEALFPHLEELSKKFPFDEILPISATQGTNVQRI 195
>gi|227890898|ref|ZP_04008703.1| GTP-binding protein Era [Lactobacillus salivarius ATCC 11741]
gi|227867307|gb|EEJ74728.1| GTP-binding protein Era [Lactobacillus salivarius ATCC 11741]
Length = 300
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 11/170 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+ +N +VG K+A +S K TT +++ G+ T+ D QI DTPG+
Sbjct: 10 VAILGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGIYTEDDAQIVFIDTPGIHKPH 69
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S VESA S +N + ++ + + + D + IER+ P
Sbjct: 70 SRLG----DFMVESALSTLNEVDAVLFMVNATQKRGRGDDFI---IERLRNVKKPI---Y 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
L +NK+D + K LL++ + +++ Y +F S L+G L + L+
Sbjct: 120 LVINKIDQIHPDK-LLQIMDDYRNTLDYAEVFPISALEGNNCPELIESLV 168
>gi|156089207|ref|XP_001612010.1| small GTP-binding protein domain containing protein [Babesia bovis]
gi|154799264|gb|EDO08442.1| small GTP-binding protein domain containing protein [Babesia bovis]
Length = 340
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 31/208 (14%)
Query: 129 EEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQ 188
+ ++ D V V ++G PNAGKSS++N ++ T +AAVS K NTT ++ G++ Q
Sbjct: 11 DSPMQPPDASVVRVSLVGLPNAGKSSLMNMLLNTPIAAVSPKVNTTREDIKGILCSDSCQ 70
Query: 189 ICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIE 248
+ D PG++ +S K V++AW A +V + + D + P + + R+I
Sbjct: 71 MVFTDCPGIL--ESHRRRKFCAPLVDTAWRAYRESDVCLFIIDAVKR---PRAELFRVIR 125
Query: 249 RMGKQAP-----------------------PKQKRV---LCMNKVDLVTKKKDLLKVAEQ 282
+ P + R+ L +NK+DLV KK + +
Sbjct: 126 NLAGATPYSLDIDRTSDKALDDDFEDTFEASSEDRIPVALVLNKIDLVKHKKWVKCRTRE 185
Query: 283 FKHLPGYERIFMTSGLKGAGLKALTQYL 310
K+ + IF TS G G + + +L
Sbjct: 186 LKNHGAFADIFYTSAKHGIGGEHIITFL 213
>gi|145300360|ref|YP_001143201.1| GTP-binding protein Era [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418362262|ref|ZP_12962901.1| GTPase Era [Aeromonas salmonicida subsp. salmonicida 01-B526]
gi|142853132|gb|ABO91453.1| GTP-binding protein Era [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356686524|gb|EHI51122.1| GTPase Era [Aeromonas salmonicida subsp. salmonicida 01-B526]
Length = 299
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 85/169 (50%), Gaps = 12/169 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N ++G KV+ S+K TT H +LG+ T+ + Q DTPGL + +
Sbjct: 10 VAIVGRPNVGKSTLLNKLLGQKVSITSKKPQTTRHRILGIDTEDNHQTIYVDTPGLHIEE 69
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAPPKQKR 260
K R+ + + +L +V MVVF V H T D V +GK
Sbjct: 70 -----KRAINRLMNRAATSSLGDVAMVVFVVDGTHWTKDDEMV------LGKLRHLPCPV 118
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQY 309
VL +NK+D V K+DLL E + I S KG ++ + ++
Sbjct: 119 VLAVNKIDNVKDKEDLLPHLEWLGQQMKFSHILPISAEKGTNVEKIREW 167
>gi|312881717|ref|ZP_07741494.1| GTP-binding protein Era [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370607|gb|EFP98082.1| GTP-binding protein Era [Vibrio caribbenthicus ATCC BAA-2122]
Length = 325
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 12/151 (7%)
Query: 128 EEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADT 187
EE + E+Q+ + I+G PN GKS+++N ++G K++ SRK TT H ++GV T+ D
Sbjct: 20 EEPSSEPENQRCGFIAIVGRPNVGKSTLLNRILGQKISITSRKPQTTRHRIMGVDTQGDF 79
Query: 188 QICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRL 246
Q DTPGL + + ++ + S+ S VNL V F V H T D V
Sbjct: 80 QAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNL-----VFFLVDGTHWTDDDEMV--- 131
Query: 247 IERMGKQAPPKQKRVLCMNKVDLVTKKKDLL 277
+ ++ K P VLC+NKVD V + ++
Sbjct: 132 LTKLQKSNFPV---VLCVNKVDNVPDRNQVM 159
>gi|257439767|ref|ZP_05615522.1| GTP-binding protein Era [Faecalibacterium prausnitzii A2-165]
gi|257197787|gb|EEU96071.1| ribosome biogenesis GTPase Era [Faecalibacterium prausnitzii
A2-165]
Length = 306
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D SV V +IG PN GKSS+ N +VG KVA V+ K TT + GV+T+ Q + DTP
Sbjct: 6 DTSSVFVAVIGRPNVGKSSLTNRLVGEKVAIVTSKPQTTRTRITGVVTRGPLQYVLLDTP 65
Query: 196 GLMLNKSGYSHKDVKVRVE-SAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
G+ +H + R++ +A ++ +V M++F+ + L P+ ++ + G A
Sbjct: 66 GVH-----KAHNKLGKRMDKTASDSIADVDVSMMLFEPYGALNEPEMVLVDALRSSGGPA 120
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTS 296
+ +NK DLV + DL + K L ++ I+ S
Sbjct: 121 ------IAVINKTDLVKEPADLEARKAELKELGVFDAIYTVS 156
>gi|253999488|ref|YP_003051551.1| GTP-binding protein Era [Methylovorus glucosetrophus SIP3-4]
gi|313201513|ref|YP_004040171.1| GTP-binding protein era [Methylovorus sp. MP688]
gi|253986167|gb|ACT51024.1| GTP-binding protein Era [Methylovorus glucosetrophus SIP3-4]
gi|312440829|gb|ADQ84935.1| GTP-binding protein Era [Methylovorus sp. MP688]
Length = 300
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 88/179 (49%), Gaps = 21/179 (11%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N+++G K++ SRK TT H +LG+ T DTQ DTP
Sbjct: 16 VAIVGRPNVGKSTLLNHILGLKLSITSRKAQTTRHRLLGIHTTDDTQYLFVDTP------ 69
Query: 202 SGYSHKDVKVRVESAWSAVN--LFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAPPKQ 258
G+ K V S V L EV +V+F + HL D V+ ++ P +
Sbjct: 70 -GFQQKHVNALNRSLNKTVTQVLAEVDVVLFVIEPMHLGEADRLVLNML-------PRNK 121
Query: 259 KRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYLMEQ 313
+L +NK DL+ K +LL + + F + I S K L+A+ Q+L EQ
Sbjct: 122 PVLLVVNKADLMGDKGNLLPLIQDFDLEFPFTAIVPVSAKKNLYLDELLQAVRQHLPEQ 180
>gi|209695942|ref|YP_002263872.1| GTP-binding protein Era [Aliivibrio salmonicida LFI1238]
gi|208009895|emb|CAQ80208.1| GTP-binding protein era [Aliivibrio salmonicida LFI1238]
Length = 321
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 79/143 (55%), Gaps = 10/143 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
++Q + I+G PN GKS+++N ++G K++ SRK TT H ++GV T+ D Q DT
Sbjct: 23 DNQHCGFIAIVGRPNVGKSTLLNQILGQKISITSRKPQTTRHRIMGVDTEGDYQAIYIDT 82
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PGL + + ++ + S+ S VNL VL +V H +PD ++ + ++ K
Sbjct: 83 PGLHIEEKRAINRLMNRAASSSLSDVNL--VLFLVDGTH---WTPDDEMV--LNKLRKAG 135
Query: 255 PPKQKRVLCMNKVDLVTKKKDLL 277
P VL +NKVD V K D++
Sbjct: 136 FPT---VLLVNKVDNVKDKNDVM 155
>gi|118580146|ref|YP_901396.1| GTP-binding protein Era [Pelobacter propionicus DSM 2379]
gi|259645964|sp|A1APR8.1|ERA_PELPD RecName: Full=GTPase Era
gi|118502856|gb|ABK99338.1| GTP-binding protein Era [Pelobacter propionicus DSM 2379]
Length = 296
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 12/167 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N ++G K+A S K TT + + G+ A+ QI DTPG+
Sbjct: 11 VSIVGRPNVGKSTLLNRIIGEKIAITSDKPQTTRNRIQGIHNIANGQIVFIDTPGIHACH 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S + K V++A +A+ ++L++V D + D R++R + +G P +
Sbjct: 71 SRLN----KGMVDAALAALRGVDLLLLVVDAGGAI---DDRLVR--DVLGGTGTPV---M 118
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
L +NKVDL+ K+ LL+ + L + I S G G+ L +
Sbjct: 119 LVLNKVDLLADKRVLLERMAAWSQLYPFREILPISAGSGEGVDGLIE 165
>gi|338730763|ref|YP_004660155.1| GTP-binding protein Era [Thermotoga thermarum DSM 5069]
gi|335365114|gb|AEH51059.1| GTP-binding protein Era [Thermotoga thermarum DSM 5069]
Length = 295
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 89/179 (49%), Gaps = 17/179 (9%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V ++G PN GKSS+IN +G K V+ K TT + + + +++QI DTPG+
Sbjct: 2 KSGFVTLVGRPNVGKSSLINSFLGRKAVIVTEKPQTTRNTIRCIYNDSESQIIFVDTPGI 61
Query: 198 M--LNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
L++ G + V SA A+ ++++ V D R + P+ R+ ++ +
Sbjct: 62 HEPLHRLG------EFMVRSAIQALKHVDLILFVVDASRGVGDPEDRICNILNQ------ 109
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
K + L +NK+D+ D K+ E K E++F TS +KG G+ L + E
Sbjct: 110 AKNRVFLVVNKIDI---ADDYEKIPELIKQKLEIEKVFFTSVVKGIGISELLNAVKEAL 165
>gi|224097032|ref|XP_002310817.1| predicted protein [Populus trichocarpa]
gi|222853720|gb|EEE91267.1| predicted protein [Populus trichocarpa]
Length = 414
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 100/198 (50%), Gaps = 11/198 (5%)
Query: 120 AALERQEEEE---EEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTH 176
A L+ E EE + + +S V ++G PN GKS++ N M+G K++ V+ K TT H
Sbjct: 94 ALLDDYEIEELAFHDSSNSNHRSGYVAVVGKPNVGKSTLSNQMIGQKLSIVTDKPQTTRH 153
Query: 177 EVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHL 236
+LG+ + D Q+ ++DTPG++ K HK + +++ SA + ++V+ D R
Sbjct: 154 RILGICSAPDYQMILYDTPGVIEKK---MHKLDSMMMKNVRSAAINADCVLVIVDACRAP 210
Query: 237 TSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTS 296
D + + + P +L +NK DL+ K ++ K E ++ G + + S
Sbjct: 211 EKIDEMLEEGVGNLKDNVP----TLLVLNKKDLI-KPGEIAKKLEWYEKFTGVDEVIPVS 265
Query: 297 GLKGAGLKALTQYLMEQF 314
G G++ + ++++ +
Sbjct: 266 AKFGQGVEDIKEWILSKL 283
>gi|307243689|ref|ZP_07525829.1| GTP-binding protein Era [Peptostreptococcus stomatis DSM 17678]
gi|306492898|gb|EFM64911.1| GTP-binding protein Era [Peptostreptococcus stomatis DSM 17678]
Length = 300
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 11/183 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N MVG K+A +S K TT + + V T QI DTPG+
Sbjct: 4 KSGFVSIVGRPNVGKSTLMNNMVGEKIAIMSDKPQTTRNTIQAVYTDDQAQIVFLDTPGI 63
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ + V+SA + + ++ V D + DS + IE + K P
Sbjct: 64 HKPKNKLGQ----MMVKSAEESFKNVDCILFVVDDSDKIGKGDSMI---IENLRKAKVP- 115
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKDL 317
L +NKVD + K+++ + + + ++ I S LKG+ + +L + + +Q DL
Sbjct: 116 --VFLVINKVDKIANKEEIFDLIKMYDQEGLFKEIIPVSALKGSNVDSLIKAI-KQTLDL 172
Query: 318 GLK 320
G K
Sbjct: 173 GPK 175
>gi|390575928|ref|ZP_10256008.1| GTPase Era [Burkholderia terrae BS001]
gi|389932069|gb|EIM94117.1| GTPase Era [Burkholderia terrae BS001]
Length = 299
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N +VG KV+ SRK TT H + G+ T D Q DTPG
Sbjct: 14 VAIVGRPNVGKSTLMNALVGQKVSITSRKAQTTRHRITGINTIDDAQYVFVDTPGFQTRH 73
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S ++ + V S S+V+ V+F + PD + ++++ + K AP +
Sbjct: 74 SSALNRSLNRAVTSTLSSVD-----AVLFVIEAGRFGPDDQ--KVLDLIPKSAP----TL 122
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERI 292
L NK+D V K L +Q L ++ I
Sbjct: 123 LIANKLDRVNDKDSLFPFMQQMSALREFKEI 153
>gi|421894234|ref|ZP_16324724.1| GTP-binding protein Era [Pediococcus pentosaceus IE-3]
gi|385272778|emb|CCG90096.1| GTP-binding protein Era [Pediococcus pentosaceus IE-3]
Length = 304
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 10/173 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+ +NY++G KVA +S TT +++ G+ T QI DTPG ++K
Sbjct: 13 VAIVGRPNVGKSTFLNYVIGQKVAIMSNVPQTTRNKIQGIYTTDREQIVFIDTPG--IHK 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S D V+SA S++N + +M + + + D+ + IER+ K +
Sbjct: 71 SHNKLGD--FMVQSAMSSLNEVDAIMFMVNADEPRGAGDNYI---IERLKKIT--DRPVY 123
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+DLV +LL + + +K + +F S L+G + L L +
Sbjct: 124 LVINKIDLV-HPDELLPIVDSYKDAMDWTEVFPISALQGNNINELVTTLSQHM 175
>gi|116492866|ref|YP_804601.1| GTPase [Pediococcus pentosaceus ATCC 25745]
gi|122265670|sp|Q03F63.1|ERA_PEDPA RecName: Full=GTPase Era
gi|116103016|gb|ABJ68159.1| GTPase [Pediococcus pentosaceus ATCC 25745]
Length = 304
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 10/173 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+ +NY++G KVA +S TT +++ G+ T QI DTPG ++K
Sbjct: 13 VAIVGRPNVGKSTFLNYVIGQKVAIMSNVPQTTRNKIQGIYTTDREQIVFIDTPG--IHK 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S D V+SA S++N + +M + + + D+ + IER+ K +
Sbjct: 71 SHNKLGD--FMVQSAMSSLNEVDAIMFMVNADEPRGAGDNYI---IERLKKIT--DRPVY 123
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+DLV +LL + + +K + +F S L+G + L L +
Sbjct: 124 LVINKIDLV-HPDELLPIVDSYKDAMDWTEVFPISALQGNNINELVTTLSQHM 175
>gi|242281264|ref|YP_002993393.1| GTP-binding protein Era [Desulfovibrio salexigens DSM 2638]
gi|242124158|gb|ACS81854.1| GTP-binding protein Era [Desulfovibrio salexigens DSM 2638]
Length = 305
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 93/182 (51%), Gaps = 4/182 (2%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ K V +IG PNAGKS+++N+ +G KVA VS K TT + + G+++ ++Q+ DT
Sbjct: 3 EEYKFGWVALIGPPNAGKSTLMNHYLGQKVAIVSPKPQTTRNRISGILSDENSQVVFLDT 62
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ + K + ++SAW A+ + ++V+FD + P L +
Sbjct: 63 PGIHRMRG----KMNRFLLDSAWEALGNADAIVVLFDAALYAAKPHLMEQELAPVVKPVN 118
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
++K + +NKVD V K LL V E+ + L S LKG G L + ++E
Sbjct: 119 QSRKKLFVAVNKVDKVKDKAKLLPVMEKAQELWPEAEFIPVSALKGDGADVLLEKVIETL 178
Query: 315 KD 316
+
Sbjct: 179 PE 180
>gi|452823012|gb|EME30026.1| GTP-binding protein Era [Galdieria sulphuraria]
Length = 390
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 17/200 (8%)
Query: 118 LQAALERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHE 177
L A+L+ E +E K + ++G N+GKS+++N +V TKVA V+ K TT +
Sbjct: 71 LNASLDGVTESTDETKFG-----FIALLGRTNSGKSTLLNALVETKVAIVTPKVQTTRTK 125
Query: 178 VLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLT 237
V+G++T+ ++Q+ DTPG+ K ++V ++ + A +++++V DV + L
Sbjct: 126 VVGILTQGNSQLAFMDTPGMFTPKKRLERAMIEVARKAQYEA----DLIVLVVDVSKALR 181
Query: 238 SPDSRVIRL---IERMGKQAPPKQKRVLCMNKVDLVTK---KKDLLKVAEQFKHLPGYER 291
S D + I ++ + LC+NKVDLV+ K+ V F +
Sbjct: 182 SGDDTLDETTLEIAKLCSHRKTSSELFLCLNKVDLVSVPQLKRVETVVVTSFNL--SFRE 239
Query: 292 IFMTSGLKGAGLKALTQYLM 311
IF S L G G++ + L+
Sbjct: 240 IFKVSALHGQGVREMRDALI 259
>gi|399037144|ref|ZP_10734039.1| GTP-binding protein Era [Rhizobium sp. CF122]
gi|398065290|gb|EJL56933.1| GTP-binding protein Era [Rhizobium sp. CF122]
Length = 306
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 11/173 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG NAGKS+++N +VG KV+ VS K TT V G+ + Q+ DTPG+
Sbjct: 13 RSGFVALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAIVRGIAIHDNAQVVFMDTPGI 72
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + V SAW +++M++ D R L ++ ++ +
Sbjct: 73 FKPRRRLD----RAMVTSAWGGAKDADLIMLLIDSERGLRGDAEAILEGLKEV------H 122
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
Q ++L +NK+D V K++DLL +A + FM S G+G + YL
Sbjct: 123 QPKILVLNKIDRV-KREDLLALAAAANEKIAFTHTFMISAENGSGCDDVMDYL 174
>gi|310643039|ref|YP_003947797.1| GTP-binding protein Era [Paenibacillus polymyxa SC2]
gi|309247989|gb|ADO57556.1| GTP-binding protein era-like protein [Paenibacillus polymyxa SC2]
gi|392303845|emb|CCI70208.1| era-like GTP-binding protein [Paenibacillus polymyxa M1]
Length = 300
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 11/169 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N+++G K+A +S K TT +++ GV T DTQI DTPG+
Sbjct: 7 KSGFVAIVGRPNVGKSTLMNHVIGQKIAIMSDKPQTTRNKIHGVYTTEDTQIVFLDTPGI 66
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+S ++A++++ E ++ + D L D R I KQ K
Sbjct: 67 HKRQSKLG----DYMNQTAFNSLGEVEAVLFLIDAAEGLGGGD----RFIAEQLKQV--K 116
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
+L +NK+D + + + LL + EQ++ L + I S G + L
Sbjct: 117 TPVILVLNKIDRI-EPEALLPLIEQYRKLYDFAEIVPISAKMGNNVNTL 164
>gi|358637839|dbj|BAL25136.1| GTP-binding protein Era [Azoarcus sp. KH32C]
Length = 306
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N ++G K++ VSRK TT H V G++T D Q DTPG
Sbjct: 21 VAIVGRPNVGKSTLLNRLIGQKISIVSRKAQTTRHRVTGILTNDDAQFVFVDTPGFQTKH 80
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
++ + V V+L + V + R D +V+ ++ P K V
Sbjct: 81 RNALNRSMNRTVSQVLGDVDL---VFFVIEAGR-FGEDDRKVVDVL-------PQGAKVV 129
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYLME 312
L +NKVD + K LL + + + I S +G LKA+T L E
Sbjct: 130 LVINKVDRLVDKSALLPFIARMNEVFPFAEIVPLSAERGTNVDELLKAVTPLLPE 184
>gi|359427855|ref|ZP_09218899.1| GTPase Era [Acinetobacter sp. NBRC 100985]
gi|358236746|dbj|GAB00438.1| GTPase Era [Acinetobacter sp. NBRC 100985]
Length = 346
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 10/171 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ +Q DTP
Sbjct: 40 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTP 99
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D + T D V +E++
Sbjct: 100 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVVDAQK-WTQNDELV---LEKLKNADM 152
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
P +L +NK+D K + L + ++ L + I S L+GA L+ L
Sbjct: 153 PV---ILVINKLDTFENKNEALPLIQERAKLMNFAEIVPVSALRGANLEHL 200
>gi|377821337|ref|YP_004977708.1| GTP-binding protein Era [Burkholderia sp. YI23]
gi|357936172|gb|AET89731.1| GTP-binding protein Era [Burkholderia sp. YI23]
Length = 287
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 11/151 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N +VG KV+ SRK TT H + G+ T D Q DTPG
Sbjct: 2 VAIVGRPNVGKSTLMNALVGQKVSITSRKAQTTRHRITGINTLDDAQYIFVDTPGFQTRH 61
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
SG ++ + V S ++V + ++ V + R D +V+ LI P +
Sbjct: 62 SGALNRSLNRAVTSTLTSV---DAILFVIEAGR-FGPDDQKVLDLI-------PAGTPTL 110
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERI 292
L NK+D V K L +Q L + I
Sbjct: 111 LIANKLDRVGDKDSLFPFMQQMSGLRDFREI 141
>gi|301066560|ref|YP_003788583.1| GTPase [Lactobacillus casei str. Zhang]
gi|300438967|gb|ADK18733.1| GTPase [Lactobacillus casei str. Zhang]
Length = 300
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 13/174 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIG PN GKS+ +N ++G K+A +S K TT +++ G+ T D QI DTPG+ K
Sbjct: 9 VAIIGRPNVGKSTFVNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPGIHKPK 68
Query: 202 SGY-SHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKR 260
+ ++ D ++A S +N + ++ + + D ++R + A K+
Sbjct: 69 NELDTYMD-----KAALSTLNQVDAILFMVEADEEKGPGDGYIMR------QLAEVKKPV 117
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+DLV K DLL + E ++H + ++F S G + L L +
Sbjct: 118 YLIINKIDLV-KPDDLLPLIESYQHDYAFAQVFPISATMGNNVDELLTALTDAL 170
>gi|443326266|ref|ZP_21054926.1| GTP-binding protein Era [Xenococcus sp. PCC 7305]
gi|442794123|gb|ELS03550.1| GTP-binding protein Era [Xenococcus sp. PCC 7305]
Length = 309
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 10/180 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS VGIIG PN GKS+++N++VG KVA S + TT + + G++T QI DTP
Sbjct: 14 DFKSGFVGIIGRPNVGKSTLMNHLVGQKVAITSPVSQTTRNRLQGILTTPQAQIIFVDTP 73
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ H+ KV V++A A+N ++++ V D D ++ L++
Sbjct: 74 GI----HKPHHELGKVIVKNAQMAINAVDLILFVVDSSAKAGKGDRFIVDLLKNT----- 124
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFK 315
K VL +NK+DL + D + + Q + + S + G G L L+++ +
Sbjct: 125 -KNPVVLGLNKIDLQPELHDRIDQSYQDLAVENNWSVSKFSAITGEGTTELQSLLVDKLE 183
>gi|375309443|ref|ZP_09774724.1| gtp-binding protein era [Paenibacillus sp. Aloe-11]
gi|375078752|gb|EHS56979.1| gtp-binding protein era [Paenibacillus sp. Aloe-11]
Length = 300
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 94/179 (52%), Gaps = 15/179 (8%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N+++G K+A +S K TT +++ GV T DTQI DTPG+
Sbjct: 7 KSGFVAIVGRPNVGKSTLMNHVIGQKIAIMSDKPQTTRNKIHGVYTTEDTQIVFLDTPGI 66
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+S ++A++A+ E ++ + D L D ++ ++++ +
Sbjct: 67 HKRQSKLG----DYMNQTAFNALGEVEAVLFLIDAAEGLGGGDRFIVEQLKQV------R 116
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYLME 312
+L +NK+D + + + LL + EQ++ L + I S G L+ L +YL E
Sbjct: 117 TPVILVLNKIDRI-EPEALLPLIEQYRKLYDFAEIVPISAKMGNNVDRLLEQLQKYLPE 174
>gi|241895551|ref|ZP_04782847.1| GTP-binding protein Era [Weissella paramesenteroides ATCC 33313]
gi|241871129|gb|EER74880.1| GTP-binding protein Era [Weissella paramesenteroides ATCC 33313]
Length = 302
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 98/183 (53%), Gaps = 11/183 (6%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
+ E++ KS + ++G PN GKS+++N M+G K+A +S K TT +++ G+ T + Q+
Sbjct: 1 MSEQEFKSGFIALVGRPNVGKSTLLNKMIGEKIAIMSPKAQTTRNKIQGIYTTNEGQMIF 60
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMG 251
DTPG ++K S D V+ +A SA+ +++ ++ + + D +I+ R+
Sbjct: 61 MDTPG--IHKPHNSLGDFMVK--TAMSALRESDMVWLLVNADQERGVGDDFIIK---RLK 113
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
+ P L +NKVDL+ + + L ++A+ + + IF S L G G+ L + M
Sbjct: 114 ESNTPV---YLIINKVDLINRAEVLNQIADYSAQM-DFAEIFPISALTGEGVPELLAFTM 169
Query: 312 EQF 314
+
Sbjct: 170 DHM 172
>gi|251796247|ref|YP_003010978.1| GTP-binding protein Era [Paenibacillus sp. JDR-2]
gi|247543873|gb|ACT00892.1| GTP-binding protein Era [Paenibacillus sp. JDR-2]
Length = 299
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 11/173 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V IIG PN GKS+++N+++G K+A +S K TT +++ GV T +QI DTPG+
Sbjct: 7 RSGFVAIIGRPNVGKSTLMNHLIGQKIAIMSDKPQTTRNKIHGVYTTDTSQIVFLDTPGI 66
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+S +K +A A+ E ++ + DV L D + IE++ K P
Sbjct: 67 HKPQSKLGDYMMK----TAEGALKEVEAVLFLIDVADGLGGGDRFI---IEQLKKVDTP- 118
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L MNK+D V + + LL Q+K L + I S L+G ++ L L
Sbjct: 119 --VFLVMNKIDKV-QPEQLLSTITQYKDLYPFAEIVPISALQGNNVETLLAQL 168
>gi|294651021|ref|ZP_06728361.1| GTP-binding protein era family protein [Acinetobacter haemolyticus
ATCC 19194]
gi|292823122|gb|EFF81985.1| GTP-binding protein era family protein [Acinetobacter haemolyticus
ATCC 19194]
Length = 341
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 10/171 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ +Q DTP
Sbjct: 35 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTP 94
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D + T D V +E++
Sbjct: 95 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVVDAQK-WTQNDELV---LEKLKNADM 147
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
P +L +NK+D K + L + ++ L + I S L+GA L+ L
Sbjct: 148 PV---ILVINKLDTFENKNEALPLIQERAKLMNFAEIVPVSALRGANLEHL 195
>gi|162136030|ref|YP_532152.2| GTP-binding protein EngA [Rhodopseudomonas palustris BisB18]
Length = 460
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 21/200 (10%)
Query: 125 QEEEEEEVKEED--QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVM 182
++++ E V EED + + V I+G PNAGKS++IN+++G + S + TT + +
Sbjct: 172 EDDDVEGVSEEDFSTRPIRVAIVGRPNAGKSTMINHLLGEERLLTSAEAGTTRDSISVEV 231
Query: 183 TKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSR 242
Q IFDT GL +S K K+ V A A+ EV++++ D D R
Sbjct: 232 DYKGRQFRIFDTAGLR-RRSRIEEKLEKLSVADALRAIRFAEVVVLMMDSQNKFEEQDLR 290
Query: 243 VIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLK--------VAEQFKHLPGYERIFM 294
+ LIER G+ V+ +NK DL+ K+ L+ + Q K +P I
Sbjct: 291 IADLIEREGRAL------VIAVNKWDLMGKQASLVAGLRADVDHLLPQVKGVP----IVA 340
Query: 295 TSGLKGAGLKALTQYLMEQF 314
SGL G G+ L + + + +
Sbjct: 341 VSGLMGEGIDRLMKAIEDSY 360
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Query: 139 SVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLM 198
S IIG PN GKS++ N +VG K+A V T G D + I DT GL
Sbjct: 2 SFTFAIIGRPNVGKSTLFNRLVGQKLALVDDTPGVTRDRREGQGKLGDLEFTIIDTAGL- 60
Query: 199 LNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPD 240
G V E +A+ L + LM V D LT D
Sbjct: 61 --DEGAKGSLVARMQEQTEAAIALADALMFVIDARAGLTPND 100
>gi|90105796|gb|ABD87833.1| Small GTP-binding protein domain [Rhodopseudomonas palustris
BisB18]
Length = 465
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 21/200 (10%)
Query: 125 QEEEEEEVKEED--QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVM 182
++++ E V EED + + V I+G PNAGKS++IN+++G + S + TT + +
Sbjct: 177 EDDDVEGVSEEDFSTRPIRVAIVGRPNAGKSTMINHLLGEERLLTSAEAGTTRDSISVEV 236
Query: 183 TKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSR 242
Q IFDT GL +S K K+ V A A+ EV++++ D D R
Sbjct: 237 DYKGRQFRIFDTAGLR-RRSRIEEKLEKLSVADALRAIRFAEVVVLMMDSQNKFEEQDLR 295
Query: 243 VIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLK--------VAEQFKHLPGYERIFM 294
+ LIER G+ V+ +NK DL+ K+ L+ + Q K +P I
Sbjct: 296 IADLIEREGRAL------VIAVNKWDLMGKQASLVAGLRADVDHLLPQVKGVP----IVA 345
Query: 295 TSGLKGAGLKALTQYLMEQF 314
SGL G G+ L + + + +
Sbjct: 346 VSGLMGEGIDRLMKAIEDSY 365
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Query: 139 SVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLM 198
S IIG PN GKS++ N +VG K+A V T G D + I DT GL
Sbjct: 7 SFTFAIIGRPNVGKSTLFNRLVGQKLALVDDTPGVTRDRREGQGKLGDLEFTIIDTAGL- 65
Query: 199 LNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPD 240
G V E +A+ L + LM V D LT D
Sbjct: 66 --DEGAKGSLVARMQEQTEAAIALADALMFVIDARAGLTPND 105
>gi|254459845|ref|ZP_05073261.1| GTP-binding protein Era [Rhodobacterales bacterium HTCC2083]
gi|206676434|gb|EDZ40921.1| GTP-binding protein Era [Rhodobacteraceae bacterium HTCC2083]
Length = 302
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 91/169 (53%), Gaps = 9/169 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS++ N MVG KV+ V+ K TT + GV + +Q+ DTPGL
Sbjct: 8 VALIGEPNAGKSTLTNRMVGAKVSIVTHKVQTTRARIRGVALEGASQLVFVDTPGLFKP- 66
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ + + V +AW +V++++ + +R +T R++ ++ G+ +K
Sbjct: 67 ---TRRLDRAMVAAAWGGAADADVVVLMIEANRGVTEGVERILEGLQDFGEH----RKIA 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D + K + LL ++E+ + FM S +G G+ AL ++L
Sbjct: 120 LAINKIDRI-KSEALLALSEKMNEAYPFVATFMISAERGHGVDALKEWL 167
>gi|226951499|ref|ZP_03821963.1| GTP-binding protein, 16S rRNA-binding, ribosome-associated GTPase
[Acinetobacter sp. ATCC 27244]
gi|226837792|gb|EEH70175.1| GTP-binding protein, 16S rRNA-binding, ribosome-associated GTPase
[Acinetobacter sp. ATCC 27244]
Length = 341
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 10/171 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ +Q DTP
Sbjct: 35 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTP 94
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D + T D V +E++
Sbjct: 95 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVVDAQK-WTQNDELV---LEKLKNADM 147
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
P +L +NK+D K + L + ++ L + I S L+GA L+ L
Sbjct: 148 PV---ILVINKLDTFENKNEALPLIQERAKLMNFAEIVPVSALRGANLEHL 195
>gi|416946573|ref|ZP_11935012.1| GTPase Era [Burkholderia sp. TJI49]
gi|325523761|gb|EGD02015.1| GTPase Era [Burkholderia sp. TJI49]
Length = 299
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 11/151 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++N +VG K++ SRK TT H + G+ T D Q DTPG
Sbjct: 14 IAIVGRPNVGKSTLMNALVGQKISITSRKAQTTRHRITGINTTEDAQFIFVDTPGFQTRH 73
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S ++ + V S ++V+ ++ V + R D +V+ LI PP +
Sbjct: 74 STALNRSLNRAVTSTLTSVD---AILFVIEAGR-FGPDDQKVLDLI-------PPGTPTL 122
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERI 292
L NK+D V K L +Q L + I
Sbjct: 123 LIANKLDRVGDKDTLFPFMQQMSTLREFAEI 153
>gi|358061039|ref|ZP_09147723.1| GTP-binding protein Era [Staphylococcus simiae CCM 7213]
gi|357256492|gb|EHJ06856.1| GTP-binding protein Era [Staphylococcus simiae CCM 7213]
Length = 299
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D +RV A + ++ + +M + + + + D +I +++ +
Sbjct: 63 G--IHKPKHKLGDYMMRV--AKNTLSEIDAIMFMVNANEDIGRGDEYIIEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV +L+ E ++ + I S L+G + L
Sbjct: 114 -KTPVFLVLNKIDLV-HPDELMPKIEAYQKYMDFTEIVPISALEGLNVDHFIDVL 166
>gi|239814410|ref|YP_002943320.1| GTP-binding protein Era [Variovorax paradoxus S110]
gi|239800987|gb|ACS18054.1| GTP-binding protein Era [Variovorax paradoxus S110]
Length = 321
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 118 LQAALERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHE 177
+ +A E Q+ + Q + I+G PN GKS+++N +VG K++ SRK TT H
Sbjct: 5 INSAAESQDPAGDTGASGPQHCGLIAIVGKPNVGKSTLLNALVGQKISITSRKAQTTRHR 64
Query: 178 VLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLT 237
+ G+ T TQ DTPG + +K + V+ A V+L +L VV T
Sbjct: 65 ITGMRTLGATQFVFVDTPGFQTLHANALNKSLNKTVQGAVGDVDL--ILFVV--EAGSFT 120
Query: 238 SPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDL 276
D RV++L +GK P VL NK+D V ++ D+
Sbjct: 121 PADERVLKL---LGKGIPT----VLLANKLDNVHRRGDI 152
>gi|217970712|ref|YP_002355946.1| GTP-binding protein Era [Thauera sp. MZ1T]
gi|217508039|gb|ACK55050.1| GTP-binding protein Era [Thauera sp. MZ1T]
Length = 309
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N ++G K++ VS K TT H V G++T+ Q DTPG +
Sbjct: 24 VAIVGRPNVGKSTLLNRLIGQKISIVSSKAQTTRHRVTGILTEPGAQFVFVDTPGFQTHH 83
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
++ + V + V+L + V + R T D +V+ +I P K +
Sbjct: 84 RNALNRSMNRTVSQVLADVDL---VFFVIEAGR-FTEDDRKVLAVI-------PESSKVI 132
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
L +NKVD + K LL Q + + I S KG + L +
Sbjct: 133 LVINKVDQLKDKTRLLPFIAQVREARDFTEIVPLSAEKGRNVDELVK 179
>gi|90407380|ref|ZP_01215565.1| GTP-binding protein Era [Psychromonas sp. CNPT3]
gi|90311531|gb|EAS39631.1| GTP-binding protein Era [Psychromonas sp. CNPT3]
Length = 300
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 90/177 (50%), Gaps = 12/177 (6%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
K V I+G PN GKS++IN ++G KV+ SRK TT H +LG+ T+ + Q DTPG
Sbjct: 3 HKCGLVAIVGRPNVGKSTLINALLGQKVSITSRKAQTTRHRILGIDTQGEYQTIFVDTPG 62
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAP 255
L + + ++ + +A S++N +V MV+F V H D V+ + + P
Sbjct: 63 LHVEEKRAINRLMN---RAASSSIN--DVEMVIFVVEGTHWNEDDEMVLSKFKYL--TCP 115
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
VL +NK+D V K+ LL ++ ++ I S KG ++ + Q+ E
Sbjct: 116 V----VLAINKIDNVEDKELLLPHLQELGERYNFKHILPMSAKKGDNIEKIRQWAQE 168
>gi|85705113|ref|ZP_01036213.1| GTP-binding protein Era [Roseovarius sp. 217]
gi|85670435|gb|EAQ25296.1| GTP-binding protein Era [Roseovarius sp. 217]
Length = 301
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 88/169 (52%), Gaps = 9/169 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ +IG PNAGKS+++N MVG KV+ V+ K TT + GV + +Q+ DTPGL +
Sbjct: 8 IALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGQSQLVFVDTPGLFQPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW +V++++ + HR +T R++ + + K +K
Sbjct: 68 RRLD----RAMVAAAWGGAADADVVILLIEAHRGVTEGVERILDGLSGIAK----GRKVA 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V + + LL + + +E+ F+ S KG G+ L +L
Sbjct: 120 LAINKIDRV-QAQVLLALTKDMNERFAFEKTFLISAEKGHGVDDLRHWL 167
>gi|134295165|ref|YP_001118900.1| GTP-binding protein Era [Burkholderia vietnamiensis G4]
gi|134138322|gb|ABO54065.1| GTP-binding protein Era [Burkholderia vietnamiensis G4]
Length = 299
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++N +VG K++ SRK TT H + G+ T D Q DTPG
Sbjct: 14 IAIVGRPNVGKSTLMNALVGQKISITSRKAQTTRHRITGINTFDDAQFIFVDTPGFQTRH 73
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S ++ + V S ++V+L ++ V + R D +V+ LI PP +
Sbjct: 74 STALNRSLNRAVTSTLTSVDL---ILFVIEAGR-FGPDDQKVLDLI-------PPGAPTL 122
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHL 286
L NKVD V K L ++ L
Sbjct: 123 LIANKVDRVGDKATLFPFMQKMSAL 147
>gi|418978290|ref|ZP_13526091.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus DR10]
gi|379993906|gb|EIA15351.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus DR10]
Length = 299
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K HK ++ A + ++ + +M + + + + D +I +++ +
Sbjct: 63 GIHKPK----HKLGDYMMKVAKNTLSEIDAIMFMVNANEQIGRGDEYIIEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV +L+ E+++ + I S L+G + L
Sbjct: 114 -KTPVFLVLNKIDLV-HPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVL 166
>gi|258622344|ref|ZP_05717369.1| GTP-binding protein [Vibrio mimicus VM573]
gi|262170591|ref|ZP_06038269.1| GTP-binding protein Era [Vibrio mimicus MB-451]
gi|424807664|ref|ZP_18233072.1| GTP-binding protein Era [Vibrio mimicus SX-4]
gi|449143790|ref|ZP_21774613.1| GTP-binding protein Era [Vibrio mimicus CAIM 602]
gi|258585360|gb|EEW10084.1| GTP-binding protein [Vibrio mimicus VM573]
gi|261891667|gb|EEY37653.1| GTP-binding protein Era [Vibrio mimicus MB-451]
gi|342325606|gb|EGU21386.1| GTP-binding protein Era [Vibrio mimicus SX-4]
gi|449080788|gb|EMB51699.1| GTP-binding protein Era [Vibrio mimicus CAIM 602]
Length = 324
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 76/143 (53%), Gaps = 10/143 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+Q V I+G PN GKS+++N ++G K++ SRK TT H ++GV T + Q DT
Sbjct: 26 ENQHCGFVAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDT 85
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PGL + + ++ + S+ S VNL VL VV H T+ D V +++
Sbjct: 86 PGLHIEEKRAINRLMNRAASSSLSDVNL--VLFVVEGT--HWTADDEMVFNKLQKANFPV 141
Query: 255 PPKQKRVLCMNKVDLVTKKKDLL 277
VLC+NKVD V + +++
Sbjct: 142 ------VLCVNKVDQVKDRNEVM 158
>gi|336053995|ref|YP_004562282.1| GTP-binding protein Era [Lactobacillus kefiranofaciens ZW3]
gi|333957372|gb|AEG40180.1| GTP-binding protein Era [Lactobacillus kefiranofaciens ZW3]
Length = 301
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
+KE KS V ++G PN GKS+++NY+VG KVA S K TT + + G+ T Q+
Sbjct: 1 MKENKFKSGFVALVGRPNVGKSTLMNYLVGQKVAITSSKPQTTRNRISGIYTSDQMQVVF 60
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERM 250
DTPG+ H + ++ A S +L +V +V+F V + D + L++ +
Sbjct: 61 VDTPGIF-----KPHSKLDDYMDKA-SLSSLNDVDLVLFMVEPEDIGKGDQYIASLLKEV 114
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKAL 306
L +NKVD + K LL + + + L G++ I S +G G LK +
Sbjct: 115 TVPV------FLVINKVDQIHPNK-LLPIIDSYNKLDGFKEILPISATQGIGIEDLLKTI 167
Query: 307 TQYLME 312
QYL E
Sbjct: 168 KQYLPE 173
>gi|403384164|ref|ZP_10926221.1| GTP-binding protein Era [Kurthia sp. JC30]
Length = 300
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 94/179 (52%), Gaps = 15/179 (8%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS + IIG PN GKS+ +N ++G K+A +S K TT ++V GV+T+ D Q+ DTPG+
Sbjct: 5 KSGFISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTQDDAQMIFIDTPGI 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K HK + + + +A+ +V+M + + + L + D VI +++ G + P
Sbjct: 65 HKPK----HKLGEFMSKVSKNALREVDVIMFMVNAQQKLGAGDKYVIEMLK--GTKTPV- 117
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYLME 312
L +NK+D + ++ K+ + +K + I S L+G L L +YL E
Sbjct: 118 ---FLIINKIDTI-HPDEVWKIVDSYKEEYDFAEIVPISALQGNNVDNLLTTLKKYLPE 172
>gi|319892624|ref|YP_004149499.1| GTP-binding protein Era [Staphylococcus pseudintermedius HKU10-03]
gi|386319167|ref|YP_006015330.1| GTP-binding protein Era [Staphylococcus pseudintermedius ED99]
gi|317162320|gb|ADV05863.1| GTP-binding protein Era [Staphylococcus pseudintermedius HKU10-03]
gi|323464338|gb|ADX76491.1| GTP-binding protein Era [Staphylococcus pseudintermedius ED99]
Length = 298
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 15/179 (8%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTPG+
Sbjct: 5 KSGFVTIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTQQDAQIVFLDTPGI 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K HK ++ A + ++ + +M + +V+ + D ++ +++ + K
Sbjct: 65 HKPK----HKLGDYMMKVAKNTLSEIDAVMFMVNVNEEIGRGDEYIMEMLKTV------K 114
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYLME 312
L +NK+DLV L+ EQ++ + I S L+G + L YL E
Sbjct: 115 TPVFLVLNKIDLVHPDA-LMPRIEQYQRYMDFAEIIPISALEGHNVDHFINVLKSYLPE 172
>gi|229916327|ref|YP_002884973.1| GTP-binding protein Era [Exiguobacterium sp. AT1b]
gi|229467756|gb|ACQ69528.1| GTP-binding protein Era [Exiguobacterium sp. AT1b]
Length = 302
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 93/173 (53%), Gaps = 11/173 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
+ED KS V IIG PN GKS+ +N ++G K+A +S K TT ++V GV T D+QI D
Sbjct: 3 QEDFKSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVYTTDDSQIIFID 62
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG ++K + D ++V A +A+ + ++ + +V + D +I ++ G
Sbjct: 63 TPG--IHKPKHRLGDFMMKV--ATNALREVDAILFMVNVTEPRGAGDDFIIEKLK--GLD 116
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
P +L MNK+DL+ +L KV EQ+ + + S L+G ++ L
Sbjct: 117 TP----IILVMNKIDLI-HPDELPKVIEQYTNELDFAAYVPISALQGNNVEPL 164
>gi|417653468|ref|ZP_12303199.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21193]
gi|329733159|gb|EGG69496.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21193]
Length = 299
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K HK ++ A + ++ + +M + + + + D +I +++ +
Sbjct: 63 GIHKPK----HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV +L+ E+++ + I S L+G + L
Sbjct: 114 -KTPVFLVLNKIDLV-HPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVL 166
>gi|387792311|ref|YP_006257376.1| GTP-binding protein Era [Solitalea canadensis DSM 3403]
gi|379655144|gb|AFD08200.1| GTP-binding protein Era [Solitalea canadensis DSM 3403]
Length = 292
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 90/180 (50%), Gaps = 23/180 (12%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ K+ V I+G PNAGKS+++N +VG +++ ++ K TT H ++G++ DTQI DTP
Sbjct: 2 EHKAGFVSIVGKPNAGKSTLMNILVGERMSIITHKAQTTRHRIIGIINDEDTQIIFSDTP 61
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G++ K G + ES A +VL+VV D++ D LIE++ K
Sbjct: 62 GMIQPKYGLQKSMMSAVNESFLDA----DVLLVVTDINEKHDEAD-----LIEKVKKYEG 112
Query: 256 PKQKRVLCMNKVD-----LVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P + +NKVD LVT K E ++ I S LK + A+T ++
Sbjct: 113 P---VAVLINKVDQSNQELVTAK------FEYWQKELNPAAIIPISALKEFNIDAITSFI 163
>gi|268315826|ref|YP_003289545.1| GTP-binding protein Era [Rhodothermus marinus DSM 4252]
gi|262333360|gb|ACY47157.1| GTP-binding protein Era [Rhodothermus marinus DSM 4252]
Length = 311
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 93/180 (51%), Gaps = 15/180 (8%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ +S V I+G PN GKS+++N ++G K++ V+ K TT H VLG+++ QI DTP
Sbjct: 22 EHRSGYVAIVGKPNVGKSTLMNALLGHKLSIVTPKPQTTRHRVLGILSGDTYQIVFLDTP 81
Query: 196 GLMLNKSGYS-HKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
G +L K+ Y H+ + V+ A + +L V+F +PD+ I L + A
Sbjct: 82 G-VLKKARYKLHEHMLRTVDRAVADADL-----VLFMAEATQKAPDT--ISLGHLGNRPA 133
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
+L +NK+DLV ++ +L + + + +E + S L G L L + ++ +
Sbjct: 134 ------ILALNKMDLVRNQEQVLPLVDAYMKQYPFEAVVPISALTGYNLDVLLKEIIHRL 187
>gi|413958492|ref|ZP_11397731.1| GTPase Era [Burkholderia sp. SJ98]
gi|413941072|gb|EKS73032.1| GTPase Era [Burkholderia sp. SJ98]
Length = 299
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 11/151 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N +VG KV+ SRK TT H + G+ T D Q DTPG
Sbjct: 14 VAIVGRPNVGKSTLMNALVGQKVSITSRKAQTTRHRITGINTFDDAQYIFVDTPGFQTRH 73
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
SG ++ + V S ++V + ++ V + R D +V+ LI P +
Sbjct: 74 SGALNRSLNRAVTSTLTSV---DAILFVIEAGR-FGPDDQKVLDLI-------PTGTPTL 122
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERI 292
L NK+D V K L +Q L + I
Sbjct: 123 LIANKLDRVGDKSSLFPFMQQMSALRDFREI 153
>gi|253732220|ref|ZP_04866385.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|418599998|ref|ZP_13163472.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21343]
gi|253724009|gb|EES92738.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|374395587|gb|EHQ66850.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21343]
Length = 299
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 91/175 (52%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D ++V A + ++ + +M + + + + D +I +++ +
Sbjct: 63 G--IHKPKHKLGDYMMKV--AKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV +L+ E+++ + I S L+G + L
Sbjct: 114 -KTPVFLVLNKIDLV-HPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVL 166
>gi|418576057|ref|ZP_13140203.1| GTP-binding protein Era [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379325119|gb|EHY92251.1| GTP-binding protein Era [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 299
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 11/165 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS + IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFISIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTQEDAQIIFLDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K HK + A + ++ + +M + +V+ + D ++ +++ +
Sbjct: 63 GIHKPK----HKLGDYMMHVATNTLSEIDAIMFMVNVNEDIGRGDEYIMDMLKTI----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKG 300
K L +NK+DLV +L+ E++K + I S L+G
Sbjct: 114 -KTPVFLVLNKIDLV-HPDELMPRIEKYKKYMDFTEIVPISALEG 156
>gi|339635061|ref|YP_004726702.1| GTPase Era [Weissella koreensis KACC 15510]
gi|338854857|gb|AEJ24023.1| GTPase Era [Weissella koreensis KACC 15510]
Length = 302
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 93/181 (51%), Gaps = 13/181 (7%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
+ E++ KS + ++G PN GKS+++N M+G K+A +S K TT +++ G+ T QI
Sbjct: 1 MSEQEFKSGFIALVGRPNVGKSTLLNQMIGEKIAIMSPKAQTTRNKIQGIYTTTQGQIVF 60
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVI-RLIERM 250
DTPG ++K S D V+ +A SA+ +++ + D D +I RL E
Sbjct: 61 LDTPG--IHKPQNSLGDYMVK--TAMSAIRESDMVWFLVDAETPRGRGDDFIINRLKET- 115
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV K + LL + ++ + IF S G G+++L +
Sbjct: 116 ------KTPVYLIINKIDLV-KPEALLTMIADYQSQMDFAEIFPISARNGDGVQSLLDFA 168
Query: 311 M 311
M
Sbjct: 169 M 169
>gi|417788392|ref|ZP_12436075.1| GTP-binding protein Era [Lactobacillus salivarius NIAS840]
gi|334308569|gb|EGL99555.1| GTP-binding protein Era [Lactobacillus salivarius NIAS840]
Length = 300
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 11/170 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+ +N +VG K+A +S K TT +++ G+ T+ D QI DTPG+
Sbjct: 10 VAILGRPNVGKSTFLNRVVGQKIAIMSDKAQTTRNKIQGIYTEDDAQIVFIDTPGIHKPH 69
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S VESA S +N + ++ + + + D +I ++ + K+
Sbjct: 70 SRLG----DFMVESALSTLNEVDAVLFMVNATQKRGRGDDFIIERLKNV------KKPIY 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
L +NK+D + K LL++ + +++ Y +F S L+G L + L+
Sbjct: 120 LVINKIDQIHPDK-LLQIMDDYRNTLDYAEVFPISALEGNNCPELIESLV 168
>gi|387143174|ref|YP_005731567.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
TW20]
gi|269941057|emb|CBI49441.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
TW20]
Length = 299
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 91/175 (52%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D ++V A + ++ + +M + + + + D +I +++ +
Sbjct: 63 G--IHKPKHKLGDYMMKV--AKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV +L+ E+++ + I S L+G + L
Sbjct: 114 -KTPVFLVLNKIDLV-HPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVL 166
>gi|334129830|ref|ZP_08503633.1| GTP-binding protein Era [Methyloversatilis universalis FAM5]
gi|333444866|gb|EGK72809.1| GTP-binding protein Era [Methyloversatilis universalis FAM5]
Length = 303
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 11/171 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++N ++G KV+ S K TT H + GV T+ Q DTPG
Sbjct: 17 IAIVGRPNVGKSTLMNRLIGQKVSITSAKAQTTRHRIHGVFTRDAHQFVFVDTPGFQTKH 76
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
++ + V A + V+ V++ V + R LT D VI L+ P + +
Sbjct: 77 RNALNRVMNRAVTQALADVD---VILFVIEAGR-LTEADEEVIALL-------PKDRPVL 125
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L +NK D + LL E+ L + I S +G GL AL + E
Sbjct: 126 LLLNKTDKTGDRAKLLPFVERVAKLHDFHAIMPVSAQRGDGLDALLKVAGE 176
>gi|283770643|ref|ZP_06343535.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus H19]
gi|283460790|gb|EFC07880.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus H19]
Length = 299
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K HK ++ A + ++ + +M + + + + D +I +++ +
Sbjct: 63 GIHKPK----HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV +L+ E+++ + I S L+G + L
Sbjct: 114 -KTPVFLVLNKIDLV-HPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVL 166
>gi|186475607|ref|YP_001857077.1| GTP-binding protein Era [Burkholderia phymatum STM815]
gi|184192066|gb|ACC70031.1| GTP-binding protein Era [Burkholderia phymatum STM815]
Length = 287
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 13/142 (9%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N +VG KV+ SRK TT H + G+ T D Q DTPG
Sbjct: 2 VAIVGRPNVGKSTLMNALVGQKVSITSRKAQTTRHRITGINTLDDAQYIFVDTPGFQTRH 61
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDS-RVIRLIERMGKQAPPKQKR 260
SG ++ + V S ++V+ V+F + PD +V+ LI P
Sbjct: 62 SGALNRSLNRAVTSTLTSVD-----AVLFVIEAGRFGPDDQKVLDLI-------PASAPT 109
Query: 261 VLCMNKVDLVTKKKDLLKVAEQ 282
+L NK+D V+ K L +Q
Sbjct: 110 LLIANKLDRVSDKDSLFPFMQQ 131
>gi|116748319|ref|YP_845006.1| GTP-binding protein Era [Syntrophobacter fumaroxidans MPOB]
gi|116697383|gb|ABK16571.1| GTP-binding protein Era [Syntrophobacter fumaroxidans MPOB]
Length = 307
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 91/175 (52%), Gaps = 12/175 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V +IGAPN GKS+++N + K++ + K TT + +LG++T+ QI DTPG+
Sbjct: 10 KSGYVALIGAPNVGKSTLLNRFLREKISITAPKPQTTRNRILGILTEPGFQIVFMDTPGI 69
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRV-IRLIERMGKQAPP 256
K ++ +V V++A + L E V F + + PD + ++E +G+ P
Sbjct: 70 HRAKDRFN----RVLVDTALA--TLGEADAVCFLI--EIPEPDPEINDYILENLGRIDTP 121
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
+L +NK+D + K LL + E+++ + + S L+G G L L+
Sbjct: 122 V---ILVINKIDALADKSRLLPLIEKYRGRHSFHAVVPVSALQGEGTDELMTELV 173
>gi|255972122|ref|ZP_05422708.1| GTP-binding protein Era [Enterococcus faecalis T1]
gi|255963140|gb|EET95616.1| GTP-binding protein Era [Enterococcus faecalis T1]
Length = 300
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 11/179 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V I+G PN GKS+++N +VG K+A +S K TT +++ G+ T + QI DTP
Sbjct: 4 EHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTIPEAQIVFIDTP 63
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D VESA++A+ + + + + D + IER+
Sbjct: 64 G--IHKPKHCLGD--FMVESAYNAMREVDATLFMVSADQKRGKGDDFI---IERLKNNNS 116
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
P L +NK+D V DLL + E + ++ I S +G + L L+EQ
Sbjct: 117 P---VYLIINKIDKV-HPDDLLSIIEDYSKQMDFKEIIPISATEGNNFEHLMDVLVEQM 171
>gi|116617891|ref|YP_818262.1| GTPase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293]
gi|381336368|ref|YP_005174143.1| GTPase [Leuconostoc mesenteroides subsp. mesenteroides J18]
gi|122271908|sp|Q03Y33.1|ERA_LEUMM RecName: Full=GTPase Era
gi|116096738|gb|ABJ61889.1| GTPase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293]
gi|356644334|gb|AET30177.1| GTPase [Leuconostoc mesenteroides subsp. mesenteroides J18]
Length = 303
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 11/178 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V IIG PN GKS+++N +VG K+A +S K TT +++ G+ T D Q+ DTPG
Sbjct: 7 KSGFVAIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDDAQVVFIDTPG- 65
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
++K S D V+ SA+SA++ + + V D D +I ++ + K P
Sbjct: 66 -VHKPQNSLGDFMVK--SAFSALHEADAIWFVVDASMARGRGDDFIIDRLQEV-KNTP-- 119
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKH-LPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NKVDL+ DLL V +++ P + +F S +G + L ++
Sbjct: 120 --IYLLINKVDLLA-PNDLLDVIASYQNDAPEWAEVFPISATEGDNVPELLDNIVSHL 174
>gi|296112101|ref|YP_003622483.1| GTP-binding protein [Leuconostoc kimchii IMSNU 11154]
gi|339490683|ref|YP_004705188.1| GTP-binding protein [Leuconostoc sp. C2]
gi|295833633|gb|ADG41514.1| GTP-binding protein [Leuconostoc kimchii IMSNU 11154]
gi|338852355|gb|AEJ30565.1| GTP-binding protein [Leuconostoc sp. C2]
Length = 303
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 89/179 (49%), Gaps = 9/179 (5%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V IIG PN GKS+++N +VG K+A +S K TT +++ G+ T Q+ DTPG
Sbjct: 7 KSGFVAIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDAAQVVFIDTPG- 65
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
++K S D V+ SA+SA++ + + V D D +I ++ +
Sbjct: 66 -VHKPQNSLGDFMVK--SAFSALHEADAIWFVVDASMPRGRGDDFIINRLQEVSNTP--- 119
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
L +NKVDL++ + L +A PG+ +F S +G + L ++ ++
Sbjct: 120 --IYLLINKVDLISPQDLLTIIASYQTDAPGWTEVFPISAREGDNVPELLDNIVANLEE 176
>gi|56963446|ref|YP_175177.1| Era, Era/TrmE family GTP-binding protein [Bacillus clausii KSM-K16]
gi|81822138|sp|Q5WHD9.1|ERA_BACSK RecName: Full=GTPase Era
gi|56909689|dbj|BAD64216.1| Era/TrmE family GTP-binding protein Era [Bacillus clausii KSM-K16]
Length = 303
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 97/180 (53%), Gaps = 13/180 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V IIG PN GKS+++N ++G K+A +S K TT ++V GV+T+ D Q+ DTPG
Sbjct: 9 KSGFVSIIGRPNVGKSTLLNRVIGQKIAIMSDKPQTTRNKVQGVLTRDDAQLVFMDTPG- 67
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLT-SPDSRVIRLIERMGKQAPP 256
++K + D ++V L EV ++++ V P + I IER+ + P
Sbjct: 68 -IHKPKHRLGDFMMKVAKN----TLREVDLILYVVEADAKFGPGEQYI--IERLQETKTP 120
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
L +NK+D V+ ++LLKV + +K + I S L+G + L + ++E ++
Sbjct: 121 ---VFLLINKIDKVS-PEELLKVIDLYKDRYPFAEIIPISALEGNNVPTLVEQIVEHMEE 176
>gi|420161056|ref|ZP_14667827.1| GTP-binding protein Era [Weissella koreensis KCTC 3621]
gi|394745806|gb|EJF34624.1| GTP-binding protein Era [Weissella koreensis KCTC 3621]
Length = 302
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 93/181 (51%), Gaps = 13/181 (7%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
+ E++ KS + ++G PN GKS+++N M+G K+A +S K TT +++ G+ T QI
Sbjct: 1 MSEQEFKSGFIALVGRPNVGKSTLLNQMIGEKIAIMSPKAQTTRNKIQGIYTTTQGQIVF 60
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVI-RLIERM 250
DTPG ++K S D V+ +A SA+ +++ + D D +I RL E
Sbjct: 61 LDTPG--IHKPQNSLGDYMVK--TAMSAIRESDMVWFLVDAETPRGRGDDFIINRLKET- 115
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV K + LL + ++ + IF S G G+++L +
Sbjct: 116 ------KTPVYLIINKIDLV-KPEALLTMIADYQSQMDFAEIFPISARNGDGVQSLLDFA 168
Query: 311 M 311
M
Sbjct: 169 M 169
>gi|393785544|ref|ZP_10373694.1| GTP-binding protein Era [Bacteroides salyersiae CL02T12C01]
gi|392662299|gb|EIY55863.1| GTP-binding protein Era [Bacteroides salyersiae CL02T12C01]
Length = 293
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 97/181 (53%), Gaps = 16/181 (8%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
K+ V I+G PN GKS+++N +VG +V+ + K TT H ++G+ D QI DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNVLVGERVSIATFKAQTTRHRIMGIYNTDDMQIVFSDTPG 61
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
++ K Y ++ + + SA+ ++L+ V DV + +PD IE++ K P
Sbjct: 62 VL--KPNYKLQESMLNFST--SALTDADILLYVTDV---IETPDKNN-EFIEKVRKMTVP 113
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
+L +NK+DL ++K L+++ E++K L I S A K Y+M++ K+
Sbjct: 114 ---VLLLINKIDLTDQEK-LIQLVEEWKALLPQAEIIPIS----AASKFNIDYVMKRVKE 165
Query: 317 L 317
L
Sbjct: 166 L 166
>gi|339236889|ref|XP_003379999.1| GTP-binding protein Era [Trichinella spiralis]
gi|316977259|gb|EFV60385.1| GTP-binding protein Era [Trichinella spiralis]
Length = 432
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 23/173 (13%)
Query: 118 LQAALERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHE 177
L L+R++ + + E +S+ V ++GAPNAGKS + N ++G +V AVS+K NTT
Sbjct: 32 LDPFLQREKITKTPEQFEGSRSLRVAVLGAPNAGKSMLTNALLGARVNAVSKKINTTQKT 91
Query: 178 VLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLT 237
+ V +Q+ DTPG++ K HK + +A++ E ++VV DV
Sbjct: 92 MTTVFIDDVSQLVFLDTPGIVTGKISKVHKLQSNLILDPENALHSAEYILVVCDV----- 146
Query: 238 SPDSRVIRLIERMGKQAPPKQKRVLC----------MNKVDLVTKKKDLLKVA 280
S D R RL P+ + +LC +NK+DL+ K LL++
Sbjct: 147 SDDYRSYRL--------NPRVQHLLCRYRHIPSLLILNKIDLIKNKTKLLEIV 191
>gi|333904564|ref|YP_004478435.1| GTP-binding protein [Streptococcus parauberis KCTC 11537]
gi|333119829|gb|AEF24763.1| GTP-binding protein [Streptococcus parauberis KCTC 11537]
gi|456370421|gb|EMF49317.1| GTP-binding protein [Streptococcus parauberis KRS-02109]
gi|457095981|gb|EMG26452.1| GTP-binding protein [Streptococcus parauberis KRS-02083]
Length = 299
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 90/179 (50%), Gaps = 11/179 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+ +NY++G K+A +S K TT ++++G+ T QI DTPG+
Sbjct: 4 KSGFVAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGI 63
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ VESA+S + E ++ + D + IER+ P
Sbjct: 64 HKPKTALGD----FMVESAYSTLREVETVIFMVPADEKRGKGDDMI---IERLKNAKIP- 115
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
+L +NK+D V + LL+ + F++ ++ + S L+G + L + L + ++
Sbjct: 116 --VILVINKIDKVHPDQ-LLEQIDDFRNQMDFKEVVPISALQGNNVNPLMEILKDNLEE 171
>gi|225870931|ref|YP_002746878.1| GTP-binding protein Era [Streptococcus equi subsp. equi 4047]
gi|254783664|sp|C0MBF0.1|ERA_STRE4 RecName: Full=GTPase Era
gi|225700335|emb|CAW94640.1| GTP-binding protein Era homolog [Streptococcus equi subsp. equi
4047]
Length = 298
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 90/179 (50%), Gaps = 11/179 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+ +N+++G K+A +S K TT ++++G+ T QI DTPG+
Sbjct: 3 KSGFVAILGRPNVGKSTFLNHVMGQKIAVMSDKAQTTRNKIMGIYTTETEQIVFIDTPGI 62
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ VESA+S + E ++ + D + IER+ P
Sbjct: 63 HKPKTALG----DFMVESAYSTLREVETVLFMVPADEKRGKGDDMI---IERLKAARIP- 114
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
+L +NK+D V + LL+ + F+ ++ I S L+G ++ L Q L + ++
Sbjct: 115 --VILVINKIDKVHPDQ-LLEQIDDFRSQMDFKEIVPISALQGNNVETLVQLLKDNLEE 170
>gi|15924557|ref|NP_372091.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus Mu50]
gi|15927147|ref|NP_374680.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus N315]
gi|21283248|ref|NP_646336.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus MW2]
gi|49483815|ref|YP_041039.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49486402|ref|YP_043623.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57651960|ref|YP_186464.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus COL]
gi|87161238|ref|YP_494222.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|148268051|ref|YP_001246994.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus JH9]
gi|150394119|ref|YP_001316794.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus JH1]
gi|151221682|ref|YP_001332504.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156979885|ref|YP_001442144.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus Mu3]
gi|161509795|ref|YP_001575454.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221140013|ref|ZP_03564506.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253316042|ref|ZP_04839255.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253733183|ref|ZP_04867348.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
TCH130]
gi|255006353|ref|ZP_05144954.2| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257425692|ref|ZP_05602116.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428353|ref|ZP_05604751.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
65-1322]
gi|257430990|ref|ZP_05607370.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
68-397]
gi|257433678|ref|ZP_05610036.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus E1410]
gi|257436592|ref|ZP_05612636.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M876]
gi|257793643|ref|ZP_05642622.1| GTP-binding protein Era [Staphylococcus aureus A9781]
gi|258411057|ref|ZP_05681337.1| GTP-binding protein Era [Staphylococcus aureus A9763]
gi|258420139|ref|ZP_05683094.1| GTP-binding protein Era [Staphylococcus aureus A9719]
gi|258423995|ref|ZP_05686877.1| GTP-binding protein Era [Staphylococcus aureus A9635]
gi|258437399|ref|ZP_05689383.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|258443605|ref|ZP_05691944.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|258446812|ref|ZP_05694966.1| GTP-binding protein Era [Staphylococcus aureus A6300]
gi|258448726|ref|ZP_05696838.1| GTP-binding protein Era [Staphylococcus aureus A6224]
gi|258450604|ref|ZP_05698666.1| GTP-binding protein Era [Staphylococcus aureus A5948]
gi|258453543|ref|ZP_05701521.1| GTP-binding protein Era [Staphylococcus aureus A5937]
gi|262051227|ref|ZP_06023451.1| hypothetical protein SA930_1658 [Staphylococcus aureus 930918-3]
gi|269203195|ref|YP_003282464.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ED98]
gi|282893068|ref|ZP_06301302.1| GTP-binding protein Era [Staphylococcus aureus A8117]
gi|282904149|ref|ZP_06312037.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C160]
gi|282905976|ref|ZP_06313831.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908886|ref|ZP_06316704.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911205|ref|ZP_06319007.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914374|ref|ZP_06322160.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M899]
gi|282916837|ref|ZP_06324595.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus D139]
gi|282919343|ref|ZP_06327078.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C427]
gi|282920116|ref|ZP_06327841.1| GTP-binding protein Era [Staphylococcus aureus A9765]
gi|282924668|ref|ZP_06332336.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C101]
gi|282928200|ref|ZP_06335805.1| GTP-binding protein Era [Staphylococcus aureus A10102]
gi|283958331|ref|ZP_06375782.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293503448|ref|ZP_06667295.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
58-424]
gi|293510465|ref|ZP_06669171.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M809]
gi|293531005|ref|ZP_06671687.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M1015]
gi|294848598|ref|ZP_06789344.1| GTP-binding protein Era [Staphylococcus aureus A9754]
gi|295406690|ref|ZP_06816495.1| GTP-binding protein Era [Staphylococcus aureus A8819]
gi|295428145|ref|ZP_06820777.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296275811|ref|ZP_06858318.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus MR1]
gi|297207714|ref|ZP_06924149.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297245728|ref|ZP_06929593.1| GTP-binding protein Era [Staphylococcus aureus A8796]
gi|297590889|ref|ZP_06949527.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus MN8]
gi|300911795|ref|ZP_07129238.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus TCH70]
gi|304380844|ref|ZP_07363504.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|379021349|ref|YP_005298011.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M013]
gi|384547800|ref|YP_005737053.1| GTP-binding protein [Staphylococcus aureus subsp. aureus ED133]
gi|384550394|ref|YP_005739646.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
JKD6159]
gi|384864788|ref|YP_005750147.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|384867459|ref|YP_005747655.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus TCH60]
gi|384870108|ref|YP_005752822.1| GTP-binding protein era -like protein [Staphylococcus aureus subsp.
aureus T0131]
gi|385781852|ref|YP_005758023.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
11819-97]
gi|386729268|ref|YP_006195651.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus 71193]
gi|386831177|ref|YP_006237831.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
HO 5096 0412]
gi|387150710|ref|YP_005742274.1| GTP-binding protein Era [Staphylococcus aureus 04-02981]
gi|387602907|ref|YP_005734428.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ST398]
gi|387780659|ref|YP_005755457.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
LGA251]
gi|404478918|ref|YP_006710348.1| GTP-binding protein [Staphylococcus aureus 08BA02176]
gi|415682369|ref|ZP_11447685.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CGS00]
gi|415686245|ref|ZP_11450382.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CGS01]
gi|415692685|ref|ZP_11454605.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CGS03]
gi|416840036|ref|ZP_11903355.1| GTP-binding protein Era [Staphylococcus aureus O11]
gi|416845845|ref|ZP_11906246.1| GTP-binding protein Era [Staphylococcus aureus O46]
gi|417651227|ref|ZP_12300990.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21172]
gi|417797559|ref|ZP_12444755.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21305]
gi|417798965|ref|ZP_12446119.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21310]
gi|417801413|ref|ZP_12448505.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21318]
gi|417887890|ref|ZP_12532009.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21195]
gi|417890050|ref|ZP_12534129.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21200]
gi|417892426|ref|ZP_12536475.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21201]
gi|417897969|ref|ZP_12541895.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21259]
gi|417901150|ref|ZP_12545027.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21266]
gi|417905376|ref|ZP_12549187.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21269]
gi|418276922|ref|ZP_12891676.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21178]
gi|418285037|ref|ZP_12897737.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21209]
gi|418308256|ref|ZP_12919894.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21194]
gi|418309957|ref|ZP_12921507.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21331]
gi|418313209|ref|ZP_12924703.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21334]
gi|418316490|ref|ZP_12927928.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21340]
gi|418319447|ref|ZP_12930827.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21232]
gi|418321275|ref|ZP_12932621.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
VCU006]
gi|418424716|ref|ZP_12997830.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS1]
gi|418427710|ref|ZP_13000715.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS2]
gi|418430552|ref|ZP_13003463.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS3a]
gi|418433695|ref|ZP_13006287.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS4]
gi|418437190|ref|ZP_13008986.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS5]
gi|418440090|ref|ZP_13011791.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS6]
gi|418443108|ref|ZP_13014707.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS7]
gi|418446170|ref|ZP_13017644.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS8]
gi|418449184|ref|ZP_13020570.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS9]
gi|418451997|ref|ZP_13023331.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS10]
gi|418454991|ref|ZP_13026250.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418457869|ref|ZP_13029068.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418558855|ref|ZP_13123402.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21252]
gi|418562370|ref|ZP_13126827.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21262]
gi|418564841|ref|ZP_13129262.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21264]
gi|418569501|ref|ZP_13133827.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21283]
gi|418574483|ref|ZP_13138652.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21333]
gi|418579492|ref|ZP_13143587.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1114]
gi|418582494|ref|ZP_13146572.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1605]
gi|418597115|ref|ZP_13160648.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21342]
gi|418601032|ref|ZP_13164480.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21345]
gi|418640362|ref|ZP_13202594.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-3]
gi|418641908|ref|ZP_13204113.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-24]
gi|418648365|ref|ZP_13210409.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-88]
gi|418650550|ref|ZP_13212568.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-91]
gi|418652846|ref|ZP_13214809.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-99]
gi|418657645|ref|ZP_13219408.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-105]
gi|418659213|ref|ZP_13220901.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-111]
gi|418662171|ref|ZP_13223725.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-122]
gi|418873233|ref|ZP_13427543.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-125]
gi|418875507|ref|ZP_13429763.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC93]
gi|418878485|ref|ZP_13432720.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1165]
gi|418881251|ref|ZP_13435468.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1213]
gi|418884099|ref|ZP_13438292.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1769]
gi|418886832|ref|ZP_13440980.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1150]
gi|418889382|ref|ZP_13443515.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1524]
gi|418892297|ref|ZP_13446410.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1176]
gi|418895330|ref|ZP_13449425.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1057]
gi|418898201|ref|ZP_13452271.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|418901072|ref|ZP_13455128.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1214]
gi|418903874|ref|ZP_13457915.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1770]
gi|418906512|ref|ZP_13460538.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|418909419|ref|ZP_13463415.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG149]
gi|418912178|ref|ZP_13466159.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG547]
gi|418914669|ref|ZP_13468640.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418917464|ref|ZP_13471423.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1267]
gi|418920648|ref|ZP_13474580.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC348]
gi|418923249|ref|ZP_13477165.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1233]
gi|418925827|ref|ZP_13479729.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG2018]
gi|418928917|ref|ZP_13482803.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1612]
gi|418931872|ref|ZP_13485707.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1750]
gi|418934537|ref|ZP_13488359.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC128]
gi|418946526|ref|ZP_13498949.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-157]
gi|418950580|ref|ZP_13502741.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-160]
gi|418955626|ref|ZP_13507563.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-189]
gi|418982573|ref|ZP_13530281.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1242]
gi|418986239|ref|ZP_13533924.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1500]
gi|418988634|ref|ZP_13536306.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1835]
gi|418991495|ref|ZP_13539156.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1096]
gi|418994293|ref|ZP_13541928.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG290]
gi|419773173|ref|ZP_14299184.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CO-23]
gi|419784712|ref|ZP_14310475.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-M]
gi|422742649|ref|ZP_16796652.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
MRSA177]
gi|422746140|ref|ZP_16800073.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
MRSA131]
gi|424768972|ref|ZP_18196209.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
CM05]
gi|424785402|ref|ZP_18212205.1| GTP-binding protein Era [Staphylococcus aureus CN79]
gi|440707444|ref|ZP_20888143.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21282]
gi|443637645|ref|ZP_21121717.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21236]
gi|448740606|ref|ZP_21722582.1| GTP-binding protein Era [Staphylococcus aureus KT/314250]
gi|448743083|ref|ZP_21724997.1| GTP-binding protein Era [Staphylococcus aureus KT/Y21]
gi|54037042|sp|P64085.1|ERA_STAAN RecName: Full=GTPase Era
gi|54037043|sp|P64086.1|ERA_STAAW RecName: Full=GTPase Era
gi|54040763|sp|P64084.1|ERA_STAAM RecName: Full=GTPase Era
gi|56748908|sp|Q6G900.1|ERA_STAAS RecName: Full=GTPase Era
gi|56748919|sp|Q6GGD3.1|ERA_STAAR RecName: Full=GTPase Era
gi|81694385|sp|Q5HFJ3.1|ERA_STAAC RecName: Full=GTPase Era
gi|123485633|sp|Q2FGF6.1|ERA_STAA3 RecName: Full=GTPase Era
gi|189037668|sp|A7X2W5.1|ERA_STAA1 RecName: Full=GTPase Era
gi|189037669|sp|A6U239.1|ERA_STAA2 RecName: Full=GTPase Era
gi|189037670|sp|A5IT95.1|ERA_STAA9 RecName: Full=GTPase Era
gi|189037671|sp|A6QHB0.1|ERA_STAAE RecName: Full=GTPase Era
gi|189037672|sp|A8Z4A6.1|ERA_STAAT RecName: Full=GTPase Era
gi|13701365|dbj|BAB42659.1| bex [Staphylococcus aureus subsp. aureus N315]
gi|14247338|dbj|BAB57729.1| GTP-binding protein Era homolog [Staphylococcus aureus subsp.
aureus Mu50]
gi|21204688|dbj|BAB95384.1| bex [Staphylococcus aureus subsp. aureus MW2]
gi|49241944|emb|CAG40639.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49244845|emb|CAG43306.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57286146|gb|AAW38240.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus COL]
gi|87127212|gb|ABD21726.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|147741120|gb|ABQ49418.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus JH9]
gi|149946571|gb|ABR52507.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus JH1]
gi|150374482|dbj|BAF67742.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156722020|dbj|BAF78437.1| GTP-binding protein Era homolog [Staphylococcus aureus subsp.
aureus Mu3]
gi|160368604|gb|ABX29575.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253728723|gb|EES97452.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
TCH130]
gi|257271386|gb|EEV03532.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275194|gb|EEV06681.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
65-1322]
gi|257278420|gb|EEV09056.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
68-397]
gi|257281771|gb|EEV11908.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus E1410]
gi|257283943|gb|EEV14066.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M876]
gi|257787615|gb|EEV25955.1| GTP-binding protein Era [Staphylococcus aureus A9781]
gi|257840207|gb|EEV64671.1| GTP-binding protein Era [Staphylococcus aureus A9763]
gi|257843850|gb|EEV68244.1| GTP-binding protein Era [Staphylococcus aureus A9719]
gi|257845616|gb|EEV69648.1| GTP-binding protein Era [Staphylococcus aureus A9635]
gi|257848604|gb|EEV72592.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|257851011|gb|EEV74954.1| conserved hypothetical protein [Staphylococcus aureus A8115]
gi|257854387|gb|EEV77336.1| GTP-binding protein Era [Staphylococcus aureus A6300]
gi|257858004|gb|EEV80893.1| GTP-binding protein Era [Staphylococcus aureus A6224]
gi|257861762|gb|EEV84561.1| GTP-binding protein Era [Staphylococcus aureus A5948]
gi|257864274|gb|EEV87024.1| GTP-binding protein Era [Staphylococcus aureus A5937]
gi|259160864|gb|EEW45884.1| hypothetical protein SA930_1658 [Staphylococcus aureus 930918-3]
gi|262075485|gb|ACY11458.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ED98]
gi|282313503|gb|EFB43898.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C101]
gi|282317153|gb|EFB47527.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C427]
gi|282319324|gb|EFB49676.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus D139]
gi|282321555|gb|EFB51880.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M899]
gi|282324900|gb|EFB55210.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327150|gb|EFB57445.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331268|gb|EFB60782.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282590007|gb|EFB95089.1| GTP-binding protein Era [Staphylococcus aureus A10102]
gi|282594464|gb|EFB99449.1| GTP-binding protein Era [Staphylococcus aureus A9765]
gi|282595767|gb|EFC00731.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus C160]
gi|282764386|gb|EFC04512.1| GTP-binding protein Era [Staphylococcus aureus A8117]
gi|283470845|emb|CAQ50056.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ST398]
gi|283790480|gb|EFC29297.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
A017934/97]
gi|285817249|gb|ADC37736.1| GTP-binding protein Era [Staphylococcus aureus 04-02981]
gi|290920273|gb|EFD97339.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M1015]
gi|291095114|gb|EFE25379.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
58-424]
gi|291466829|gb|EFF09349.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M809]
gi|294824624|gb|EFG41047.1| GTP-binding protein Era [Staphylococcus aureus A9754]
gi|294968437|gb|EFG44461.1| GTP-binding protein Era [Staphylococcus aureus A8819]
gi|295128503|gb|EFG58137.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296887731|gb|EFH26629.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297177379|gb|EFH36631.1| GTP-binding protein Era [Staphylococcus aureus A8796]
gi|297575775|gb|EFH94491.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus MN8]
gi|298694849|gb|ADI98071.1| GTP-binding protein [Staphylococcus aureus subsp. aureus ED133]
gi|300886041|gb|EFK81243.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus TCH70]
gi|302333243|gb|ADL23436.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
JKD6159]
gi|304340571|gb|EFM06505.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312437964|gb|ADQ77035.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus TCH60]
gi|312829955|emb|CBX34797.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|315129845|gb|EFT85835.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CGS03]
gi|315195469|gb|EFU25856.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CGS00]
gi|315198738|gb|EFU29066.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CGS01]
gi|320140548|gb|EFW32402.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320144085|gb|EFW35854.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323440465|gb|EGA98177.1| GTP-binding protein Era [Staphylococcus aureus O11]
gi|323443239|gb|EGB00857.1| GTP-binding protein Era [Staphylococcus aureus O46]
gi|329314243|gb|AEB88656.1| GTP-binding protein era -like protein [Staphylococcus aureus subsp.
aureus T0131]
gi|329727411|gb|EGG63867.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21172]
gi|334267051|gb|EGL85521.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21305]
gi|334275127|gb|EGL93428.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21310]
gi|334276862|gb|EGL95108.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21318]
gi|341843652|gb|EGS84874.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21269]
gi|341846309|gb|EGS87506.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21266]
gi|341849471|gb|EGS90614.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21259]
gi|341855743|gb|EGS96587.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21200]
gi|341856919|gb|EGS97746.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21195]
gi|341857591|gb|EGS98403.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21201]
gi|344177761|emb|CCC88240.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
LGA251]
gi|359830658|gb|AEV78636.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus M013]
gi|364522841|gb|AEW65591.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
11819-97]
gi|365172048|gb|EHM62793.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21209]
gi|365173905|gb|EHM64334.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21178]
gi|365225507|gb|EHM66750.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
VCU006]
gi|365236480|gb|EHM77369.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21334]
gi|365237414|gb|EHM78260.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21331]
gi|365240447|gb|EHM81223.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21194]
gi|365240566|gb|EHM81338.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21232]
gi|365241174|gb|EHM81929.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21340]
gi|371973474|gb|EHO90822.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21262]
gi|371975978|gb|EHO93270.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21264]
gi|371976205|gb|EHO93495.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21252]
gi|371979210|gb|EHO96445.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21333]
gi|371985630|gb|EHP02691.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21283]
gi|374395351|gb|EHQ66618.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21342]
gi|374400279|gb|EHQ71398.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21345]
gi|375014926|gb|EHS08597.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-3]
gi|375018363|gb|EHS11943.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-24]
gi|375021014|gb|EHS14521.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-99]
gi|375026278|gb|EHS19661.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-88]
gi|375027836|gb|EHS21194.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-91]
gi|375030125|gb|EHS23449.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-105]
gi|375036211|gb|EHS29289.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-111]
gi|375037116|gb|EHS30170.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-122]
gi|375366424|gb|EHS70421.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-125]
gi|375370712|gb|EHS74510.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-189]
gi|375376683|gb|EHS80207.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-160]
gi|375377871|gb|EHS81308.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
IS-157]
gi|377694607|gb|EHT18972.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1165]
gi|377695136|gb|EHT19500.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1057]
gi|377697519|gb|EHT21874.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1114]
gi|377702469|gb|EHT26791.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1214]
gi|377704283|gb|EHT28593.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1500]
gi|377704854|gb|EHT29163.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1242]
gi|377710904|gb|EHT35142.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1605]
gi|377713050|gb|EHT37263.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1750]
gi|377714434|gb|EHT38635.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1769]
gi|377717727|gb|EHT41902.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1835]
gi|377722435|gb|EHT46561.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG547]
gi|377723617|gb|EHT47742.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1096]
gi|377725785|gb|EHT49898.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1150]
gi|377730591|gb|EHT54658.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1176]
gi|377730994|gb|EHT55052.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1213]
gi|377735208|gb|EHT59244.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1233]
gi|377738829|gb|EHT62838.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1612]
gi|377742889|gb|EHT66874.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1770]
gi|377744090|gb|EHT68068.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG290]
gi|377744896|gb|EHT68873.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG2018]
gi|377750638|gb|EHT74576.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1267]
gi|377752066|gb|EHT75990.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG149]
gi|377752890|gb|EHT76808.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIG1524]
gi|377756995|gb|EHT80891.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377761236|gb|EHT85112.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|377763417|gb|EHT87273.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|377764374|gb|EHT88227.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC348]
gi|377769579|gb|EHT93347.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC93]
gi|377770631|gb|EHT94392.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
CIGC128]
gi|383363922|gb|EID41248.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-M]
gi|383972997|gb|EID89018.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus CO-23]
gi|384230561|gb|AFH69808.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus 71193]
gi|385196569|emb|CCG16198.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
HO 5096 0412]
gi|387717998|gb|EIK05993.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS2]
gi|387718292|gb|EIK06276.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS3a]
gi|387719495|gb|EIK07440.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS1]
gi|387724919|gb|EIK12550.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS4]
gi|387727178|gb|EIK14710.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS5]
gi|387730240|gb|EIK17647.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS6]
gi|387735308|gb|EIK22437.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS8]
gi|387736784|gb|EIK23872.1| GTPase Era [Staphylococcus aureus subsp. aureus VRS7]
gi|387736947|gb|EIK24033.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS9]
gi|387744878|gb|EIK31642.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus VRS10]
gi|387745044|gb|EIK31806.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387746637|gb|EIK33366.1| GTP-binding protein era [Staphylococcus aureus subsp. aureus
VRS11b]
gi|402348363|gb|EJU83355.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
CM05]
gi|404440407|gb|AFR73600.1| putative GTP-binding protein [Staphylococcus aureus 08BA02176]
gi|408423688|emb|CCJ11099.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|408425678|emb|CCJ13065.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|408427665|emb|CCJ15028.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|408429654|emb|CCJ26819.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|408431641|emb|CCJ18956.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|408433635|emb|CCJ20920.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|408435627|emb|CCJ22887.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|408437611|emb|CCJ24854.1| GTPase Era [Staphylococcus aureus subsp. aureus ST228]
gi|421956812|gb|EKU09141.1| GTP-binding protein Era [Staphylococcus aureus CN79]
gi|436506200|gb|ELP42039.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21282]
gi|443405216|gb|ELS63824.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21236]
gi|445548573|gb|ELY16823.1| GTP-binding protein Era [Staphylococcus aureus KT/314250]
gi|445563770|gb|ELY19927.1| GTP-binding protein Era [Staphylococcus aureus KT/Y21]
Length = 299
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K HK ++ A + ++ + +M + + + + D +I +++ +
Sbjct: 63 GIHKPK----HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV +L+ E+++ + I S L+G + L
Sbjct: 114 -KTPVFLVLNKIDLV-HPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVL 166
>gi|417986872|ref|ZP_12627437.1| GTP-binding protein [Lactobacillus casei 32G]
gi|410524606|gb|EKP99514.1| GTP-binding protein [Lactobacillus casei 32G]
Length = 300
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 13/174 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIG PN GKS+ +N ++G K+A +S K TT +++ G+ T D QI DTPG+ K
Sbjct: 9 VAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPGIHKPK 68
Query: 202 SGY-SHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKR 260
+ ++ D ++A S +N + ++ + + D ++R + A K+
Sbjct: 69 NELDTYMD-----KAALSTLNQVDAILFMVEADEEKGPGDGYIMR------QLAEVKKPV 117
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+DLV K DLL + E ++H + ++F S G + L L +
Sbjct: 118 YLIINKIDLV-KPDDLLPLIENYQHDYAFAQVFPISATMGNNVDELLTALTDAL 170
>gi|297539124|ref|YP_003674893.1| GTP-binding protein Era [Methylotenera versatilis 301]
gi|297258471|gb|ADI30316.1| GTP-binding protein Era [Methylotenera versatilis 301]
Length = 307
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 87/180 (48%), Gaps = 15/180 (8%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
K + I+G PN GKS+++N+++G K+A SRK TT H +LG+ T DTQ DTPG
Sbjct: 19 KCGTIAIVGRPNVGKSTLLNHILGMKLAITSRKAQTTRHRLLGIHTTEDTQFLFVDTPGF 78
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+K + V + V++ VL V+ + L D +V+ L+ PP
Sbjct: 79 QQKHLNTLNKGLNKTVTQVLTEVDV--VLFVIEPM--KLGEADRKVLALLS----DKPPT 130
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALT----QYLMEQ 313
+L +NK DL+ K +LL + + F + I S K L L +YL EQ
Sbjct: 131 ---ILVVNKSDLMGDKGNLLPLIQDFDLEFPFTDIVPVSAKKSLNLDELLHTIRKYLPEQ 187
>gi|257865833|ref|ZP_05645486.1| GTP-binding protein Era [Enterococcus casseliflavus EC30]
gi|257872168|ref|ZP_05651821.1| GTP-binding protein Era [Enterococcus casseliflavus EC10]
gi|257875461|ref|ZP_05655114.1| GTP-binding protein Era [Enterococcus casseliflavus EC20]
gi|325569848|ref|ZP_08145842.1| GTP-binding protein Era [Enterococcus casseliflavus ATCC 12755]
gi|257799767|gb|EEV28819.1| GTP-binding protein Era [Enterococcus casseliflavus EC30]
gi|257806332|gb|EEV35154.1| GTP-binding protein Era [Enterococcus casseliflavus EC10]
gi|257809627|gb|EEV38447.1| GTP-binding protein Era [Enterococcus casseliflavus EC20]
gi|325156971|gb|EGC69139.1| GTP-binding protein Era [Enterococcus casseliflavus ATCC 12755]
Length = 299
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
KS V I+G PN GKS+++N +VG K+A +S K TT +++ GV T D Q+ DTPG
Sbjct: 4 HKSGFVAIVGRPNVGKSTLLNRVVGQKIAIMSDKAQTTRNKIQGVYTTDDAQLIFIDTPG 63
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ K H+ VE+A+SA+ +V + + + D + IER+ + P
Sbjct: 64 IHKPK----HRLGDFMVETAYSALREVDVTLFMISADQKRGKGDDFI---IERLRQSQTP 116
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+D V LL + E + + I S +G + L + L+++
Sbjct: 117 V---FLVINKIDKVHPDA-LLAIIEDYSSQMDFAEIVPISATEGNNFETLMKLLIDEM 170
>gi|153823698|ref|ZP_01976365.1| GTP-binding protein Era [Vibrio cholerae B33]
gi|126518786|gb|EAZ76009.1| GTP-binding protein Era [Vibrio cholerae B33]
Length = 282
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 76/143 (53%), Gaps = 10/143 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+Q V I+G PN GKS+++N ++G K++ SRK TT H ++GV T + Q DT
Sbjct: 27 ENQHCGFVAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDT 86
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PGL + + ++ + S+ S VNL VL VV H T+ D V +++
Sbjct: 87 PGLHIEEKRAINRLMNRAASSSLSDVNL--VLFVVEGT--HWTADDEMVFTKLQKANFPV 142
Query: 255 PPKQKRVLCMNKVDLVTKKKDLL 277
VLC+NKVD V + +++
Sbjct: 143 ------VLCVNKVDQVKDRNEVM 159
>gi|445059533|ref|YP_007384937.1| GTPase Era [Staphylococcus warneri SG1]
gi|443425590|gb|AGC90493.1| GTPase Era [Staphylococcus warneri SG1]
Length = 299
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 15/181 (8%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K HK ++ A + ++ + +M + +V+ + D ++ +++ +
Sbjct: 63 GIHKPK----HKLGDYMMKVATNTLSEIDAIMFMVNVNEDIGRGDEYIMDMLKDL----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYLM 311
K L +NK+DLV + K+ E+++ + I S L+G + L YL
Sbjct: 114 -KTPVFLVLNKIDLVHPDALMPKI-EKYQEYMNFTEIVPISALEGLNVDHFIDVLKSYLP 171
Query: 312 E 312
E
Sbjct: 172 E 172
>gi|344199887|ref|YP_004784213.1| GTP-binding protein Era-like-protein [Acidithiobacillus ferrivorans
SS3]
gi|343775331|gb|AEM47887.1| GTP-binding protein Era-like-protein [Acidithiobacillus ferrivorans
SS3]
Length = 304
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 23/186 (12%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
V +E +S V ++G PN GKS+++N++VG K++ + + TT ++LG++T+ D Q+
Sbjct: 8 VPDEGHRSGYVALLGRPNVGKSTLLNHLVGQKISITAPRPQTTRDQILGILTRPDGQLLF 67
Query: 192 FDTPGLMLNKSGYSH------KDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIR 245
DTPG+ SGY + + +ESA V + E L+ D D+ +R
Sbjct: 68 LDTPGV---HSGYRSLNRHLLRATRGALESADLGVLVVEALLWTHD--------DAEALR 116
Query: 246 LIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKA 305
++R G V +NKVD VT K L + + + S K A ++
Sbjct: 117 WLQRAGIPL------VAVVNKVDRVTAKARLFPYLQILAGRGDFAAVIPLSARKAADVER 170
Query: 306 LTQYLM 311
L L+
Sbjct: 171 LADVLV 176
>gi|381210387|ref|ZP_09917458.1| GTP-binding protein [Lentibacillus sp. Grbi]
Length = 300
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 87/169 (51%), Gaps = 11/169 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS + IIG PN GKS+ +N ++G K+A +S K TT + + GV+T D Q+ DTPG
Sbjct: 6 KSGFIAIIGRPNVGKSTFMNQIIGQKIAIMSDKAQTTRNRIQGVLTSDDAQLVFIDTPG- 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
++K + D V+V A +N + ++ + + D ++ ++++ K
Sbjct: 65 -IHKPKHRLGDFMVKV--AEDTLNEVDAVLFMINAKEGYGKGDQYILDRLQKV------K 115
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
+ L +NK+DLV +LL + + +K +E I S L+G L L
Sbjct: 116 RPVFLVINKIDLV-HPDNLLPLIDSYKDKYNFEEIIPISALQGNNLTHL 163
>gi|418284070|ref|ZP_12896802.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21202]
gi|365164934|gb|EHM56764.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21202]
Length = 299
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K HK ++ A + ++ + +M + + + + D +I +++ +
Sbjct: 63 GIHKPK----HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV +L+ E+++ + I S L+G + L
Sbjct: 114 -KTPVFLVLNKIDLV-HPDELIPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVL 166
>gi|152976731|ref|YP_001376248.1| GTP-binding protein Era [Bacillus cytotoxicus NVH 391-98]
gi|152025483|gb|ABS23253.1| GTP-binding protein Era [Bacillus cytotoxicus NVH 391-98]
Length = 301
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 11/169 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V IIG PN GKS+ +N ++G K+A +S K TT ++V GV T+ D Q+ DTPG+
Sbjct: 7 KSGFVSIIGRPNVGKSTFLNRIIGQKIAIMSDKPQTTRNKVQGVYTENDAQVIFIDTPGI 66
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K HK V+ A + + ++++ + + + +I K +
Sbjct: 67 HKPK----HKLGDFMVKMAQTTLKEVDIVLFMVNAAEGFGRGEEYIIE------KLKETR 116
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
Q L +NK+D V +K LL++ +Q+++L + I S L+G ++AL
Sbjct: 117 QPVFLVINKIDQVHPEK-LLELIDQYRNLYEFAEIVPISALEGNNVEAL 164
>gi|260220752|emb|CBA28631.1| GTP-binding protein era homolog [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 393
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 11/140 (7%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
Q+ V I+G PN GKS+++N +VG K++ SRK TT H + G+ T+ TQ DTPG
Sbjct: 96 QRCGLVAIVGKPNVGKSTLLNALVGQKISITSRKAQTTRHRITGMRTEGQTQFVFVDTPG 155
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+K + V+ A S V+L VL VV TS D +V++L +G+ P
Sbjct: 156 FQTIHGNALNKSLNKAVQGAVSDVDL--VLFVV--EAGSFTSADEKVLKL---LGEGIPV 208
Query: 257 KQKRVLCMNKVDLVTKKKDL 276
VL NK+D V ++ L
Sbjct: 209 ----VLVANKLDNVKERAGL 224
>gi|387901788|ref|YP_006332127.1| GTP-binding protein Era [Burkholderia sp. KJ006]
gi|387576680|gb|AFJ85396.1| GTP-binding protein Era [Burkholderia sp. KJ006]
Length = 287
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++N +VG K++ SRK TT H + G+ T D Q DTPG
Sbjct: 2 IAIVGRPNVGKSTLMNALVGQKISITSRKAQTTRHRITGINTFDDAQFIFVDTPGFQTRH 61
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S ++ + V S ++V+L ++ V + R D +V+ LI PP +
Sbjct: 62 STALNRSLNRAVTSTLTSVDL---ILFVIEAGR-FGPDDQKVLDLI-------PPGAPTL 110
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHL 286
L NK+D V K L ++ L
Sbjct: 111 LIANKIDRVGDKATLFPFMQKMSAL 135
>gi|333394977|ref|ZP_08476796.1| GTPase Era [Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
gi|420144895|ref|ZP_14652374.1| GTPase Era [Lactobacillus coryniformis subsp. coryniformis CECT
5711]
gi|398403452|gb|EJN56694.1| GTPase Era [Lactobacillus coryniformis subsp. coryniformis CECT
5711]
Length = 301
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+ +N +VG KVA +S K TT +++ G+ T +QI DTPG+ +
Sbjct: 11 VAIVGRPNVGKSTFLNRVVGQKVAIMSNKAQTTRNKIQGIYTTEHSQIVFIDTPGIHKPQ 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ + + SA SA+N + ++ + + + D+ +I ++++ KQ
Sbjct: 71 NKLD----EFMMNSATSALNEVDAVLFMVSAKDRMGAGDTFIIDQLKKV------KQPVY 120
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V DL EQ++ + ++F S L+G + L L
Sbjct: 121 LIVNKIDTV-HPNDLAPFVEQYQAELDFAQVFPISALQGNNVDELLATL 168
>gi|403070154|ref|ZP_10911486.1| GTP-binding protein [Oceanobacillus sp. Ndiop]
Length = 302
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 90/173 (52%), Gaps = 11/173 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS + IIG PN GKS+ +N ++G K+A +S K TT +++ GV+T D Q+ DTPG
Sbjct: 8 KSGFITIIGRPNVGKSTFMNRVIGQKIAIMSDKAQTTRNKIQGVLTTDDAQMVFIDTPG- 66
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
++K + D V+V A + +N + ++ + + D ++ L++ + K
Sbjct: 67 -IHKPKHRLGDFMVKV--AENTLNEVDAVLFMINAKEGYGKGDQYILDLLKNV------K 117
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+DL+ +++ + EQ+K +E I S L+G + L L
Sbjct: 118 GPVYLIINKIDLI-HPEEVFSLIEQYKDKGNFEEIIPISALEGNNVDHLVDVL 169
>gi|326803486|ref|YP_004321304.1| ribosome biogenesis GTPase Era [Aerococcus urinae ACS-120-V-Col10a]
gi|326650900|gb|AEA01083.1| ribosome biogenesis GTPase Era [Aerococcus urinae ACS-120-V-Col10a]
Length = 303
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 94/173 (54%), Gaps = 11/173 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N+++G KVA +S K TT +++ + T + QI DTPG+ K
Sbjct: 12 VAIVGRPNVGKSTLLNHIIGQKVAIMSDKAQTTRNKIHAIYTTDEVQIVFIDTPGIHKPK 71
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
H+ + V+SA+SA++ EV++++ + + P R I +E++ PK +
Sbjct: 72 ----HELGEYMVKSAYSALDEVEVILMLVNSTEKI-GPGDRFI--MEKIAAYNTPK---I 121
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK D + K+DL E + +++I S L G + L + L ++
Sbjct: 122 LAVNKTDQL-DKEDLAAYLESIPNKDIFDQIIPLSALTGDNVDQLLKELTKEM 173
>gi|239631408|ref|ZP_04674439.1| GTPase [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|417980798|ref|ZP_12621477.1| GTP-binding protein [Lactobacillus casei 12A]
gi|417983530|ref|ZP_12624166.1| GTP-binding protein [Lactobacillus casei 21/1]
gi|417989754|ref|ZP_12630255.1| GTP-binding protein [Lactobacillus casei A2-362]
gi|417999249|ref|ZP_12639460.1| GTP-binding protein [Lactobacillus casei T71499]
gi|418002193|ref|ZP_12642315.1| GTP-binding protein [Lactobacillus casei UCD174]
gi|418008114|ref|ZP_12647983.1| GTP-binding protein [Lactobacillus casei UW4]
gi|418010953|ref|ZP_12650724.1| GTP-binding protein [Lactobacillus casei Lc-10]
gi|418015193|ref|ZP_12654770.1| GTP-binding protein [Lactobacillus casei Lpc-37]
gi|239525873|gb|EEQ64874.1| GTPase [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|410524309|gb|EKP99221.1| GTP-binding protein [Lactobacillus casei 12A]
gi|410527799|gb|EKQ02661.1| GTP-binding protein [Lactobacillus casei 21/1]
gi|410537499|gb|EKQ12073.1| GTP-binding protein [Lactobacillus casei A2-362]
gi|410539525|gb|EKQ14053.1| GTP-binding protein [Lactobacillus casei T71499]
gi|410544621|gb|EKQ18942.1| GTP-binding protein [Lactobacillus casei UCD174]
gi|410547342|gb|EKQ21577.1| GTP-binding protein [Lactobacillus casei UW4]
gi|410552017|gb|EKQ26056.1| GTP-binding protein [Lactobacillus casei Lpc-37]
gi|410553532|gb|EKQ27535.1| GTP-binding protein [Lactobacillus casei Lc-10]
Length = 300
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 13/174 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIG PN GKS+ +N ++G K+A +S K TT +++ G+ T D QI DTPG+ K
Sbjct: 9 VAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPGIHKPK 68
Query: 202 SGY-SHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKR 260
+ ++ D ++A S +N + ++ + + D ++R + A K+
Sbjct: 69 NELDTYMD-----KAALSTLNQVDAILFMVEADEEKGPGDGYIMR------QLAEVKKPV 117
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+DLV K DLL + E ++H + ++F S G + L L +
Sbjct: 118 YLIINKIDLV-KPDDLLPLIESYQHDYAFAQVFPISATMGNNVDELLTALTDAL 170
>gi|373452012|ref|ZP_09543930.1| GTP-binding protein Era [Eubacterium sp. 3_1_31]
gi|371967444|gb|EHO84915.1| GTP-binding protein Era [Eubacterium sp. 3_1_31]
Length = 301
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 91/173 (52%), Gaps = 11/173 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS + IIG PNAGKS+++N ++ K+A + K TT + + G++T+ D Q DTP
Sbjct: 2 NYKSGFIAIIGRPNAGKSTLLNALLNEKIAITTPKPQTTRNNISGILTREDAQFIFTDTP 61
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K H+ K +A++A+ +V V D + S D L+E++ +
Sbjct: 62 GIHKPK----HELGKTLNRNAYTAIAEADVNFWVVDATQSFGSGDE---FLLEKIKQSHI 114
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
P L +NK+DL+ K+K L++ +Q++ + IF S L+ L L +
Sbjct: 115 PC---FLILNKIDLLDKEK-LIRTLQQWQERHTFAEIFPVSALQKDNLNDLLE 163
>gi|334339735|ref|YP_004544715.1| GTP-binding protein Era [Desulfotomaculum ruminis DSM 2154]
gi|334091089|gb|AEG59429.1| GTP-binding protein Era [Desulfotomaculum ruminis DSM 2154]
Length = 302
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E +S V ++G PN GKS+++N +VG KVA +S K TT H++ V+++ D QI DT
Sbjct: 6 EGYRSGFVALVGRPNVGKSTLLNKLVGQKVAIMSDKPQTTRHKIHSVLSRNDAQIIFLDT 65
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PG+ + HK + V+ A A+ +V++ + + + D + ++ +
Sbjct: 66 PGIHKPR----HKLGEHLVDVALGALKEVDVVLFLAEASDPPGAGDQYIAEQLKGL---- 117
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
K L +NK+DL+ KK+++L+ Q+K L + I S L G + L ++
Sbjct: 118 --KTPVFLLLNKIDLI-KKEEILERIHQYKDLAPFAEIVPVSALAGENVDRLIDVII 171
>gi|161353525|ref|YP_500179.2| GTP-binding protein Era [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|379014775|ref|YP_005291011.1| GTPase Era [Staphylococcus aureus subsp. aureus VC40]
gi|417649235|ref|ZP_12299039.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21189]
gi|440735018|ref|ZP_20914629.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus DSM
20231]
gi|317374940|sp|Q2FY06.2|ERA_STAA8 RecName: Full=GTPase Era
gi|329728341|gb|EGG64778.1| ribosome biogenesis GTPase Era [Staphylococcus aureus subsp. aureus
21189]
gi|374363472|gb|AEZ37577.1| GTPase Era [Staphylococcus aureus subsp. aureus VC40]
gi|436431113|gb|ELP28467.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus DSM
20231]
Length = 299
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K HK ++ A + ++ + +M + + + + D +I +++ +
Sbjct: 63 GIHKPK----HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV +L+ E+++ + I S L+G + L
Sbjct: 114 -KTPVFLVLNKIDLV-HPDELMPKIEEYQSYMDFTEIVPISALEGLNVDHFIDVL 166
>gi|402756388|ref|ZP_10858644.1| GTPase Era [Acinetobacter sp. NCTC 7422]
Length = 341
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 10/171 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ +Q DTP
Sbjct: 35 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTP 94
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL VL VV D + T D V +E++
Sbjct: 95 GMHKKEVRAINKMMNRAAHSALRDVNL--VLFVV-DAQK-WTQNDELV---LEKLKNAEM 147
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
P +L +NK+D K + L + + L + I S L+GA L+ L
Sbjct: 148 PV---ILVINKLDTFENKNEALPLIRERAKLMNFAEIVPVSALRGANLEHL 195
>gi|326794406|ref|YP_004312226.1| GTP-binding protein Era-like-protein [Marinomonas mediterranea
MMB-1]
gi|326545170|gb|ADZ90390.1| GTP-binding protein Era-like-protein [Marinomonas mediterranea
MMB-1]
Length = 339
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 97/186 (52%), Gaps = 15/186 (8%)
Query: 133 KEEDQKSVA----VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQ 188
+EED + + V I+G PN GKS+++N+++G K++ SRK TT ++LGV T+ Q
Sbjct: 38 QEEDYQEITHCGFVAIVGRPNVGKSTLMNHILGQKLSITSRKPQTTRDQILGVKTEGSIQ 97
Query: 189 ICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIE 248
DTPGL L + ++ + ++A +A+ +V++ V D R T D V++ ++
Sbjct: 98 TIYVDTPGLHLGQQKAINRFMN---KTATAALKDVDVVLFVIDAER-WTDEDESVLQKVQ 153
Query: 249 RMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
Q P VL +NKVD + +K +LL + +I S L+ L L +
Sbjct: 154 Y--AQCPV----VLVVNKVDNLDEKDELLPKLAALSEKMEFAQIVPISALRNKNLDRL-E 206
Query: 309 YLMEQF 314
L+E +
Sbjct: 207 NLVESY 212
>gi|311031640|ref|ZP_07709730.1| GTP-binding protein Era [Bacillus sp. m3-13]
Length = 305
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 91/169 (53%), Gaps = 11/169 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GV T+ D QI DTPG
Sbjct: 10 KSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKIQGVFTQDDAQIVFIDTPG- 68
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
++K + D ++V A + + ++++ + + L D + IE++ + + P
Sbjct: 69 -IHKPKHKLGDFMMKV--AQNTLKEVDLVLFMINAKEGLGKGDEFI---IEKLKETSTP- 121
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
L +NK+D V DLL + E +K L ++ I S L+G ++ L
Sbjct: 122 --VYLVINKIDEV-HPDDLLPLMETYKALYPFKEIVPISALQGNNVEVL 167
>gi|428315511|ref|YP_007113393.1| GTP-binding protein Era-like-protein [Oscillatoria nigro-viridis
PCC 7112]
gi|428239191|gb|AFZ04977.1| GTP-binding protein Era-like-protein [Oscillatoria nigro-viridis
PCC 7112]
Length = 315
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 94/179 (52%), Gaps = 13/179 (7%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS VGI+G PN GKS+++N +VG K+A S + TT + + G++T + QI DTPG
Sbjct: 23 KSGFVGIVGRPNVGKSTLMNQLVGQKIAITSPVSQTTRNRLRGILTTPEAQIIFVDTPG- 81
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
++K H+ KV V++A +A+ +V++ V D D ++ ++ K
Sbjct: 82 -IHKP--HHQLGKVLVQNARTAIQSVDVVLFVVDGSVESGGGDRYIVEILSNC------K 132
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYER-IFMTSGLKGAGLKALTQYLMEQFK 315
+L MNK+D + D + + ++ + E + S L G G+++L Q L+E +
Sbjct: 133 VPVILGMNKLD--EQPSDCVLIDRTYEQIVNPEWPVVKFSALTGEGVESLQQLLIEHLE 189
>gi|53804478|ref|YP_113919.1| GTP-binding protein Era [Methylococcus capsulatus str. Bath]
gi|53758239|gb|AAU92530.1| GTP-binding protein Era [Methylococcus capsulatus str. Bath]
Length = 293
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 10/174 (5%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V ++G PN GKS+++N+++G K++ VSR+ TT H +LG+ T Q+ DTPG+
Sbjct: 2 KSGYVALVGRPNVGKSTLLNHLLGQKLSIVSRRPQTTRHRILGIKTDGRGQVIYVDTPGI 61
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
G + + + R + + +L V ++++ V R PD ++ M + K
Sbjct: 62 ----HGGARRAMN-RYLNRTAISSLLGVDVILWLVDRAGWLPDDELV-----MARIKEAK 111
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
+L +NKVD + K LL + + I S LKG L L + ++
Sbjct: 112 LPVILVINKVDRIEGKDTLLPFLAEANATGLFSEIVPISALKGINLAVLEERVL 165
>gi|149643011|ref|NP_001092492.1| GTPase Era, mitochondrial [Bos taurus]
gi|322518596|sp|A5PK43.1|ERAL1_BOVIN RecName: Full=GTPase Era, mitochondrial; AltName: Full=ERA-like
protein 1; Flags: Precursor
gi|148745519|gb|AAI42349.1| ERAL1 protein [Bos taurus]
gi|296476862|tpg|DAA18977.1| TPA: Era-like 1 [Bos taurus]
gi|440912266|gb|ELR61850.1| GTP-binding protein era-like protein [Bos grunniens mutus]
Length = 437
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 104/234 (44%), Gaps = 53/234 (22%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ + + V ++GAPNAGKS++ N ++G KV VS+K +TT + LGV+T+ +TQ+ + DT
Sbjct: 109 ENPRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSKKVHTTRSQALGVITEKETQVILLDT 168
Query: 195 PGLMLNKSGYSHKDVKVRVESAW----SAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM 250
PGL+ H +E W SA + ++ V R+ SP +V+R + +
Sbjct: 169 PGLISPAKQKRHHLELSLLEDPWKSMESADLVVVLVDVSDKWTRNQLSP--QVLRCLTQF 226
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQF---------------------KHLPG- 288
Q P +L MNKVD + +K LL++ H P
Sbjct: 227 S-QVP----SILVMNKVDCLKQKSVLLELTAALTEGVVNGKKLKTKQALRSRPDTHCPSP 281
Query: 289 --------------------YERIFMTSGLKGAGLKALTQYLMEQFKDLGLKIH 322
++ IFM S L +K L QYL+ Q + + H
Sbjct: 282 AAQGPNPQPVRDPQQMGWPHFQEIFMLSALSQEDVKTLKQYLLAQARPGPWEFH 335
>gi|119476420|ref|ZP_01616771.1| GTP-binding protein Era [marine gamma proteobacterium HTCC2143]
gi|119450284|gb|EAW31519.1| GTP-binding protein Era [marine gamma proteobacterium HTCC2143]
Length = 301
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIG PN GKS+++N+++G K++ SRK TT H VLG+ T+ +TQ DTPG ++K
Sbjct: 10 VAIIGRPNVGKSTLLNHILGQKISITSRKPQTTRHRVLGIKTENNTQAIFVDTPG--IHK 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S K + + A S+ ++V T D V+ ++R + P +
Sbjct: 68 GTESDKAINRYMNRAASSTITDVDVVVFVVERGKWTDGDEWVLEQVKR--AECPV----I 121
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
L +NKVD + K LL E +H + I S L G L L
Sbjct: 122 LVINKVDQMQDKSQLLPFLEACQHKMNFVDIIPLSALNGTNLTNL 166
>gi|289764681|ref|ZP_06524059.1| GTP binding protein [Fusobacterium sp. D11]
gi|289716236|gb|EFD80248.1| GTP binding protein [Fusobacterium sp. D11]
Length = 298
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 20/187 (10%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
K+ + ++G PN GKS++IN +V KVA VS K TT + G++ D Q DTPG
Sbjct: 1 MKAGFIAVVGRPNVGKSTLINKLVSEKVAIVSDKAGTTRDNIKGILNFKDNQYIFIDTPG 60
Query: 197 LMLNKSGYSHKDVKVRVESAWS-AVNLF---EVLMVVFDVHRHLTSPDSRVIRLIERMGK 252
+ HK + E + AVN+ ++++ + D + + + D V+ I K
Sbjct: 61 I--------HKPQHLLGEYMTNIAVNILKDVDIILFLIDASKPIGTGDMFVMDRINENAK 112
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQ 308
+ P ++L +NKVDL++ ++ K+ E + L +++I SG+ G L+AL
Sbjct: 113 KKP----KILLVNKVDLISDEQKEEKLKEIEEKLGNFDKIIFASGMYSFGISQLLEALDP 168
Query: 309 YLMEQFK 315
YL E K
Sbjct: 169 YLEEGVK 175
>gi|126739722|ref|ZP_01755414.1| GTP-binding protein Era [Roseobacter sp. SK209-2-6]
gi|126719368|gb|EBA16078.1| GTP-binding protein Era [Roseobacter sp. SK209-2-6]
Length = 301
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N MVG KV+ V+ K TT V GV + D+QI DTPGL +
Sbjct: 8 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARVRGVAMEGDSQIVFVDTPGLFQPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW ++++++ + HR +T R++ + +G+ ++
Sbjct: 68 RRLD----RAMVAAAWGGAADADIILLLVEAHRGITEGVERILEGLADIGE----GRRVA 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+D V + + LL + + + F+ S +G G++ L ++ +
Sbjct: 120 LAINKIDRV-QSEVLLGLTKDLNEKFDFAETFLISAERGHGVEDLRGWIASEL 171
>gi|365855808|ref|ZP_09395846.1| ribosome biogenesis GTPase Era [Acetobacteraceae bacterium AT-5844]
gi|363718829|gb|EHM02155.1| ribosome biogenesis GTPase Era [Acetobacteraceae bacterium AT-5844]
Length = 312
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ ++GAPNAGKS+++N + G+KV+ VS K TT + V+ D Q+ + DTPG+ +
Sbjct: 23 IAVVGAPNAGKSTLVNRLAGSKVSIVSPKPQTTRFRIRAVVMHNDAQLVLADTPGIFSPR 82
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW + ++ M+V D LT ++ +++R K
Sbjct: 83 RRLD----RAMVAAAWESTQDADLAMLVVDARAGLTEALQSIVSVLKR------SKVPVW 132
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK DL+ K+ LL + +E M S G G++ + +
Sbjct: 133 LVLNKTDLIDTKR-LLPLTAALNEQLQFEETLMVSAETGDGVERMLDLM 180
>gi|339236873|ref|XP_003379991.1| GTP-binding protein Era [Trichinella spiralis]
gi|316977276|gb|EFV60399.1| GTP-binding protein Era [Trichinella spiralis]
Length = 421
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 23/173 (13%)
Query: 118 LQAALERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHE 177
L L+R++ + + E +S+ V ++GAPNAGKS + N ++G +V AVS+K NTT
Sbjct: 32 LDPFLQREKITKTPEQFEGSRSLRVAVLGAPNAGKSMLTNALLGARVNAVSKKINTTQKT 91
Query: 178 VLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLT 237
+ V +Q+ DTPG++ K HK + +A++ E ++VV DV
Sbjct: 92 MTTVFIDDVSQLVFLDTPGIVTGKISKVHKLQSNLILDPENALHSAEYILVVCDV----- 146
Query: 238 SPDSRVIRLIERMGKQAPPKQKRVLC----------MNKVDLVTKKKDLLKVA 280
S D R RL P+ + +LC +NK+DL+ K LL++
Sbjct: 147 SDDYRSYRL--------NPRVQHLLCRYRHIPSLLILNKIDLIKNKTKLLEIV 191
>gi|160900692|ref|YP_001566274.1| GTP-binding protein Era [Delftia acidovorans SPH-1]
gi|333913010|ref|YP_004486742.1| GTP-binding protein Era [Delftia sp. Cs1-4]
gi|160366276|gb|ABX37889.1| GTP-binding protein Era [Delftia acidovorans SPH-1]
gi|333743210|gb|AEF88387.1| GTP-binding protein Era [Delftia sp. Cs1-4]
Length = 344
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 126 EEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKA 185
E + EV Q+ + I+G PN GKS+++N +VG K++ SRK TT H + G+ ++A
Sbjct: 38 EAQAPEVPTGPQRCGLIAIVGKPNVGKSTLMNALVGQKISITSRKAQTTRHRITGIRSRA 97
Query: 186 DTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIR 245
TQ DTPG S +K + V A V+L +L VV T D++V+
Sbjct: 98 ATQFIFVDTPGFQTKHSTALNKSLNKTVMGAIGDVDL--ILFVV--EAGQFTLADAKVLS 153
Query: 246 LIERMGKQAPPKQKRVLCMNKVDLVTKKKDL 276
L + P +L NK+D V ++ ++
Sbjct: 154 LFK-------PGIPTLLIANKLDTVGRRAEI 177
>gi|15642456|ref|NP_232089.1| GTP-binding protein Era [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121590984|ref|ZP_01678303.1| GTP-binding protein Era [Vibrio cholerae 2740-80]
gi|153820071|ref|ZP_01972738.1| GTP-binding protein Era [Vibrio cholerae NCTC 8457]
gi|227082581|ref|YP_002811132.1| GTP-binding protein Era [Vibrio cholerae M66-2]
gi|229507480|ref|ZP_04396985.1| GTP-binding protein Era [Vibrio cholerae BX 330286]
gi|229512325|ref|ZP_04401804.1| GTP-binding protein Era [Vibrio cholerae B33]
gi|229519461|ref|ZP_04408904.1| GTP-binding protein Era [Vibrio cholerae RC9]
gi|229606985|ref|YP_002877633.1| GTP-binding protein Era [Vibrio cholerae MJ-1236]
gi|254849585|ref|ZP_05238935.1| GTP-binding protein Era [Vibrio cholerae MO10]
gi|255746869|ref|ZP_05420814.1| GTP-binding protein Era [Vibrio cholera CIRS 101]
gi|262162034|ref|ZP_06031050.1| GTP-binding protein Era [Vibrio cholerae INDRE 91/1]
gi|262404773|ref|ZP_06081328.1| GTP-binding protein Era [Vibrio sp. RC586]
gi|298500183|ref|ZP_07009988.1| GTP-binding protein Era [Vibrio cholerae MAK 757]
gi|360036335|ref|YP_004938098.1| GTP-binding protein Era [Vibrio cholerae O1 str. 2010EL-1786]
gi|379742248|ref|YP_005334217.1| GTPase Era [Vibrio cholerae IEC224]
gi|417814476|ref|ZP_12461129.1| GTP-binding protein Era [Vibrio cholerae HC-49A2]
gi|417818216|ref|ZP_12464844.1| GTP-binding protein Era [Vibrio cholerae HCUF01]
gi|418335459|ref|ZP_12944368.1| GTP-binding protein Era [Vibrio cholerae HC-06A1]
gi|418339424|ref|ZP_12948314.1| GTP-binding protein Era [Vibrio cholerae HC-23A1]
gi|418346995|ref|ZP_12951748.1| GTP-binding protein Era [Vibrio cholerae HC-28A1]
gi|418350751|ref|ZP_12955482.1| GTP-binding protein Era [Vibrio cholerae HC-43A1]
gi|418356036|ref|ZP_12958755.1| GTP-binding protein Era [Vibrio cholerae HC-61A1]
gi|419827404|ref|ZP_14350903.1| GTP-binding protein Era [Vibrio cholerae CP1033(6)]
gi|421318207|ref|ZP_15768775.1| GTP-binding protein Era [Vibrio cholerae CP1032(5)]
gi|421322209|ref|ZP_15772761.1| GTP-binding protein Era [Vibrio cholerae CP1038(11)]
gi|421326007|ref|ZP_15776531.1| GTP-binding protein Era [Vibrio cholerae CP1041(14)]
gi|421329665|ref|ZP_15780175.1| GTP-binding protein Era [Vibrio cholerae CP1042(15)]
gi|421333621|ref|ZP_15784098.1| GTP-binding protein Era [Vibrio cholerae CP1046(19)]
gi|421337163|ref|ZP_15787624.1| GTP-binding protein Era [Vibrio cholerae CP1048(21)]
gi|421340590|ref|ZP_15791022.1| GTP-binding protein Era [Vibrio cholerae HC-20A2]
gi|421348203|ref|ZP_15798580.1| GTP-binding protein Era [Vibrio cholerae HC-46A1]
gi|422897551|ref|ZP_16934990.1| GTP-binding protein Era [Vibrio cholerae HC-40A1]
gi|422903750|ref|ZP_16938714.1| GTP-binding protein Era [Vibrio cholerae HC-48A1]
gi|422907634|ref|ZP_16942427.1| GTP-binding protein Era [Vibrio cholerae HC-70A1]
gi|422914474|ref|ZP_16948978.1| GTP-binding protein Era [Vibrio cholerae HFU-02]
gi|422926678|ref|ZP_16959690.1| GTP-binding protein Era [Vibrio cholerae HC-38A1]
gi|423146001|ref|ZP_17133594.1| GTP-binding protein Era [Vibrio cholerae HC-19A1]
gi|423150677|ref|ZP_17137990.1| GTP-binding protein Era [Vibrio cholerae HC-21A1]
gi|423154511|ref|ZP_17141675.1| GTP-binding protein Era [Vibrio cholerae HC-22A1]
gi|423157579|ref|ZP_17144671.1| GTP-binding protein Era [Vibrio cholerae HC-32A1]
gi|423161151|ref|ZP_17148089.1| GTP-binding protein Era [Vibrio cholerae HC-33A2]
gi|423165980|ref|ZP_17152699.1| GTP-binding protein Era [Vibrio cholerae HC-48B2]
gi|423732010|ref|ZP_17705311.1| GTP-binding protein Era [Vibrio cholerae HC-17A1]
gi|423771411|ref|ZP_17713575.1| GTP-binding protein Era [Vibrio cholerae HC-50A2]
gi|423896788|ref|ZP_17727620.1| GTP-binding protein Era [Vibrio cholerae HC-62A1]
gi|423931991|ref|ZP_17732013.1| GTP-binding protein Era [Vibrio cholerae HC-77A1]
gi|424003426|ref|ZP_17746500.1| GTP-binding protein Era [Vibrio cholerae HC-17A2]
gi|424007220|ref|ZP_17750189.1| GTP-binding protein Era [Vibrio cholerae HC-37A1]
gi|424025200|ref|ZP_17764849.1| GTP-binding protein Era [Vibrio cholerae HC-62B1]
gi|424028086|ref|ZP_17767687.1| GTP-binding protein Era [Vibrio cholerae HC-69A1]
gi|424587367|ref|ZP_18026945.1| GTP-binding protein Era [Vibrio cholerae CP1030(3)]
gi|424596022|ref|ZP_18035340.1| GTP-binding protein Era [Vibrio cholerae CP1040(13)]
gi|424602692|ref|ZP_18041831.1| GTP-binding protein Era [Vibrio cholerae CP1047(20)]
gi|424607626|ref|ZP_18046566.1| GTP-binding protein Era [Vibrio cholerae CP1050(23)]
gi|424611442|ref|ZP_18050280.1| GTP-binding protein Era [Vibrio cholerae HC-39A1]
gi|424614270|ref|ZP_18053054.1| GTP-binding protein Era [Vibrio cholerae HC-41A1]
gi|424618237|ref|ZP_18056907.1| GTP-binding protein Era [Vibrio cholerae HC-42A1]
gi|424623023|ref|ZP_18061526.1| GTP-binding protein Era [Vibrio cholerae HC-47A1]
gi|424653750|ref|ZP_18091129.1| GTP-binding protein Era [Vibrio cholerae HC-57A2]
gi|424657571|ref|ZP_18094855.1| GTP-binding protein Era [Vibrio cholerae HC-81A2]
gi|440710686|ref|ZP_20891334.1| GTP-binding protein Era [Vibrio cholerae 4260B]
gi|443504800|ref|ZP_21071752.1| GTP-binding protein Era [Vibrio cholerae HC-64A1]
gi|443508706|ref|ZP_21075461.1| GTP-binding protein Era [Vibrio cholerae HC-65A1]
gi|443512544|ref|ZP_21079177.1| GTP-binding protein Era [Vibrio cholerae HC-67A1]
gi|443516103|ref|ZP_21082608.1| GTP-binding protein Era [Vibrio cholerae HC-68A1]
gi|443519894|ref|ZP_21086282.1| GTP-binding protein Era [Vibrio cholerae HC-71A1]
gi|443524788|ref|ZP_21090991.1| GTP-binding protein Era [Vibrio cholerae HC-72A2]
gi|443532372|ref|ZP_21098386.1| GTP-binding protein Era [Vibrio cholerae HC-7A1]
gi|443536186|ref|ZP_21102053.1| GTP-binding protein Era [Vibrio cholerae HC-80A1]
gi|443539715|ref|ZP_21105568.1| GTP-binding protein Era [Vibrio cholerae HC-81A1]
gi|449055099|ref|ZP_21733767.1| GTP-binding protein Era [Vibrio cholerae O1 str. Inaba G4222]
gi|31340514|sp|Q9KPB3.3|ERA_VIBCH RecName: Full=GTPase Era
gi|9657038|gb|AAF95602.1| GTP-binding protein Era [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121547161|gb|EAX57290.1| GTP-binding protein Era [Vibrio cholerae 2740-80]
gi|126509383|gb|EAZ71977.1| GTP-binding protein Era [Vibrio cholerae NCTC 8457]
gi|227010469|gb|ACP06681.1| GTP-binding protein Era [Vibrio cholerae M66-2]
gi|229344150|gb|EEO09125.1| GTP-binding protein Era [Vibrio cholerae RC9]
gi|229352290|gb|EEO17231.1| GTP-binding protein Era [Vibrio cholerae B33]
gi|229354985|gb|EEO19906.1| GTP-binding protein Era [Vibrio cholerae BX 330286]
gi|229369640|gb|ACQ60063.1| GTP-binding protein Era [Vibrio cholerae MJ-1236]
gi|254845290|gb|EET23704.1| GTP-binding protein Era [Vibrio cholerae MO10]
gi|255735271|gb|EET90671.1| GTP-binding protein Era [Vibrio cholera CIRS 101]
gi|262028283|gb|EEY46940.1| GTP-binding protein Era [Vibrio cholerae INDRE 91/1]
gi|262349805|gb|EEY98943.1| GTP-binding protein Era [Vibrio sp. RC586]
gi|297540876|gb|EFH76930.1| GTP-binding protein Era [Vibrio cholerae MAK 757]
gi|340035812|gb|EGQ96790.1| GTP-binding protein Era [Vibrio cholerae HCUF01]
gi|340036962|gb|EGQ97938.1| GTP-binding protein Era [Vibrio cholerae HC-49A2]
gi|341619807|gb|EGS45609.1| GTP-binding protein Era [Vibrio cholerae HC-48A1]
gi|341619924|gb|EGS45711.1| GTP-binding protein Era [Vibrio cholerae HC-70A1]
gi|341620729|gb|EGS46495.1| GTP-binding protein Era [Vibrio cholerae HC-40A1]
gi|341636286|gb|EGS60988.1| GTP-binding protein Era [Vibrio cholerae HFU-02]
gi|341645679|gb|EGS69808.1| GTP-binding protein Era [Vibrio cholerae HC-38A1]
gi|356416494|gb|EHH70125.1| GTP-binding protein Era [Vibrio cholerae HC-06A1]
gi|356417354|gb|EHH70972.1| GTP-binding protein Era [Vibrio cholerae HC-21A1]
gi|356422245|gb|EHH75728.1| GTP-binding protein Era [Vibrio cholerae HC-19A1]
gi|356427716|gb|EHH80957.1| GTP-binding protein Era [Vibrio cholerae HC-22A1]
gi|356428384|gb|EHH81611.1| GTP-binding protein Era [Vibrio cholerae HC-23A1]
gi|356429523|gb|EHH82739.1| GTP-binding protein Era [Vibrio cholerae HC-28A1]
gi|356439049|gb|EHH92049.1| GTP-binding protein Era [Vibrio cholerae HC-32A1]
gi|356443644|gb|EHH96463.1| GTP-binding protein Era [Vibrio cholerae HC-33A2]
gi|356445247|gb|EHH98056.1| GTP-binding protein Era [Vibrio cholerae HC-43A1]
gi|356449571|gb|EHI02317.1| GTP-binding protein Era [Vibrio cholerae HC-48B2]
gi|356452534|gb|EHI05213.1| GTP-binding protein Era [Vibrio cholerae HC-61A1]
gi|356647489|gb|AET27544.1| GTP-binding protein Era [Vibrio cholerae O1 str. 2010EL-1786]
gi|378795758|gb|AFC59229.1| GTPase Era [Vibrio cholerae IEC224]
gi|395916465|gb|EJH27295.1| GTP-binding protein Era [Vibrio cholerae CP1032(5)]
gi|395917845|gb|EJH28673.1| GTP-binding protein Era [Vibrio cholerae CP1041(14)]
gi|395917949|gb|EJH28776.1| GTP-binding protein Era [Vibrio cholerae CP1038(11)]
gi|395928199|gb|EJH38962.1| GTP-binding protein Era [Vibrio cholerae CP1042(15)]
gi|395929023|gb|EJH39776.1| GTP-binding protein Era [Vibrio cholerae CP1046(19)]
gi|395932262|gb|EJH43006.1| GTP-binding protein Era [Vibrio cholerae CP1048(21)]
gi|395939873|gb|EJH50555.1| GTP-binding protein Era [Vibrio cholerae HC-20A2]
gi|395942782|gb|EJH53458.1| GTP-binding protein Era [Vibrio cholerae HC-46A1]
gi|395958242|gb|EJH68742.1| GTP-binding protein Era [Vibrio cholerae HC-57A2]
gi|395960872|gb|EJH71227.1| GTP-binding protein Era [Vibrio cholerae HC-42A1]
gi|395970125|gb|EJH79932.1| GTP-binding protein Era [Vibrio cholerae HC-47A1]
gi|395972036|gb|EJH81657.1| GTP-binding protein Era [Vibrio cholerae CP1030(3)]
gi|395974495|gb|EJH84021.1| GTP-binding protein Era [Vibrio cholerae CP1047(20)]
gi|408006182|gb|EKG44354.1| GTP-binding protein Era [Vibrio cholerae HC-39A1]
gi|408010764|gb|EKG48613.1| GTP-binding protein Era [Vibrio cholerae HC-41A1]
gi|408030572|gb|EKG67227.1| GTP-binding protein Era [Vibrio cholerae CP1040(13)]
gi|408041960|gb|EKG78043.1| GTP-binding protein Era [Vibrio cholerae CP1050(23)]
gi|408051893|gb|EKG86966.1| GTP-binding protein Era [Vibrio cholerae HC-81A2]
gi|408608194|gb|EKK81597.1| GTP-binding protein Era [Vibrio cholerae CP1033(6)]
gi|408622455|gb|EKK95439.1| GTP-binding protein Era [Vibrio cholerae HC-17A1]
gi|408632871|gb|EKL05299.1| GTP-binding protein Era [Vibrio cholerae HC-50A2]
gi|408653583|gb|EKL24745.1| GTP-binding protein Era [Vibrio cholerae HC-77A1]
gi|408654076|gb|EKL25219.1| GTP-binding protein Era [Vibrio cholerae HC-62A1]
gi|408844319|gb|EKL84451.1| GTP-binding protein Era [Vibrio cholerae HC-37A1]
gi|408845075|gb|EKL85196.1| GTP-binding protein Era [Vibrio cholerae HC-17A2]
gi|408869526|gb|EKM08822.1| GTP-binding protein Era [Vibrio cholerae HC-62B1]
gi|408878362|gb|EKM17372.1| GTP-binding protein Era [Vibrio cholerae HC-69A1]
gi|439974015|gb|ELP50219.1| GTP-binding protein Era [Vibrio cholerae 4260B]
gi|443430879|gb|ELS73437.1| GTP-binding protein Era [Vibrio cholerae HC-64A1]
gi|443434709|gb|ELS80861.1| GTP-binding protein Era [Vibrio cholerae HC-65A1]
gi|443438602|gb|ELS88322.1| GTP-binding protein Era [Vibrio cholerae HC-67A1]
gi|443442639|gb|ELS95947.1| GTP-binding protein Era [Vibrio cholerae HC-68A1]
gi|443446528|gb|ELT03192.1| GTP-binding protein Era [Vibrio cholerae HC-71A1]
gi|443449241|gb|ELT09542.1| GTP-binding protein Era [Vibrio cholerae HC-72A2]
gi|443457762|gb|ELT25159.1| GTP-binding protein Era [Vibrio cholerae HC-7A1]
gi|443460689|gb|ELT31773.1| GTP-binding protein Era [Vibrio cholerae HC-80A1]
gi|443464845|gb|ELT39506.1| GTP-binding protein Era [Vibrio cholerae HC-81A1]
gi|448265141|gb|EMB02376.1| GTP-binding protein Era [Vibrio cholerae O1 str. Inaba G4222]
Length = 325
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 77/143 (53%), Gaps = 10/143 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+Q V I+G PN GKS+++N ++G K++ SRK TT H ++GV T + Q DT
Sbjct: 27 ENQHCGFVAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDT 86
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PGL + + ++ + S+ S VNL VL VV H T+ D V ++ K
Sbjct: 87 PGLHIEEKRAINRLMNRAASSSLSDVNL--VLFVVEGT--HWTADDEMV---FTKLQKAN 139
Query: 255 PPKQKRVLCMNKVDLVTKKKDLL 277
P VLC+NKVD V + +++
Sbjct: 140 FPV---VLCVNKVDQVKDRNEVM 159
>gi|418645203|ref|ZP_13207331.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-55]
gi|421148553|ref|ZP_15608213.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|443639997|ref|ZP_21123997.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21196]
gi|375024036|gb|EHS17481.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus IS-55]
gi|394331696|gb|EJE57779.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|443406272|gb|ELS64856.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus 21196]
Length = 299
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K HK ++ A + ++ + +M + + + + D +I +++ +
Sbjct: 63 GIHKPK----HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV +L+ E+++ + I S L+G + L
Sbjct: 114 -KTPVFLVLNKIDLV-HPDELMPKIEEYQTYMDFTEIVPISALEGLNVDHFIDVL 166
>gi|425746281|ref|ZP_18864311.1| GTP-binding protein Era [Acinetobacter baumannii WC-323]
gi|425486158|gb|EKU52530.1| GTP-binding protein Era [Acinetobacter baumannii WC-323]
Length = 342
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 10/171 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ +Q DTP
Sbjct: 36 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTP 95
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D + T D V +E++
Sbjct: 96 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVVDAQK-WTQNDELV---LEKLKNADM 148
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
P +L +NK+D K + L + + L + I S L+GA L+ L
Sbjct: 149 PV---ILVINKLDTFENKNEALPLIRERAKLMNFAEIVPVSALRGANLEHL 196
>gi|352517865|ref|YP_004887182.1| GTP-binding protein Era [Tetragenococcus halophilus NBRC 12172]
gi|348601972|dbj|BAK95018.1| GTP-binding protein Era [Tetragenococcus halophilus NBRC 12172]
Length = 299
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 87/179 (48%), Gaps = 11/179 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+++N +VG K+A +S K TT +++ GV T + QI DTP
Sbjct: 3 EHKSGFVAIIGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGVYTTDNMQIVFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K H+ V A+ A+ E ++ + + D+ + IER+ K
Sbjct: 63 GIHKPK----HRLGDYMVNEAYGALQEVEAVLFMVNADEKRGKGDNLI---IERLQKLDV 115
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
P L +NK+D + DLL V + + + + S +G + L Q L EQ
Sbjct: 116 P---VFLIVNKIDKI-HPDDLLAVIQDYSTQMDFAEVVPLSATQGNNCETLMQLLEEQI 170
>gi|121534215|ref|ZP_01666040.1| GTP-binding protein Era [Thermosinus carboxydivorans Nor1]
gi|121307318|gb|EAX48235.1| GTP-binding protein Era [Thermosinus carboxydivorans Nor1]
Length = 298
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 11/174 (6%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
K + KS V +IG PN GKS+++N +VG K+A +S K TT + +L V+T D QI
Sbjct: 3 KAGEYKSGFVAVIGRPNVGKSTLVNSLVGQKIAIMSDKPQTTRNRILCVLTLDDAQILFI 62
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGK 252
DTPG+ K H+ + V++A + + +V++ V D + + + +ER+ K
Sbjct: 63 DTPGIHKPK----HRLGEYMVQAAETTLREVDVILFVVDATAEKGAGEQYI---LERLAK 115
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
A P +L +NKVD + K + +L + +Q+ + + S L+ L L
Sbjct: 116 VATPV---ILVVNKVDQIPKPQ-VLPIIDQYARSRDFAAVVPISALQKVNLDRL 165
>gi|407452635|ref|YP_006724360.1| GTPase [Riemerella anatipestifer RA-CH-1]
gi|403313619|gb|AFR36460.1| GTPase [Riemerella anatipestifer RA-CH-1]
Length = 291
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 91/172 (52%), Gaps = 16/172 (9%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
K+ V I+G PNAGKS+++N ++G K+A V++K TT H + G+ + D QI DTPG
Sbjct: 2 HKAGFVNIVGKPNAGKSTLLNQLMGEKLAIVTKKAQTTRHRIFGIYNEPDLQIVFSDTPG 61
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
++ K G K + +S A +V + + DV T D+ LIE++ K P
Sbjct: 62 VLDPKYGLQEKMMDFVKDSLQDA----DVFLFIVDV----TDKDAPSEFLIEKLNKIPVP 113
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKH--LPGYERIFMTSGLKGAGLKAL 306
++ +NK+D T +++L K+ F H +P E I S L+G A+
Sbjct: 114 ---VLILINKID-QTNQEELEKLM-HFWHEQIPKAE-ILPISALEGFNTDAI 159
>gi|310659078|ref|YP_003936799.1| GTP-binding protein Era [[Clostridium] sticklandii]
gi|308825856|emb|CBH21894.1| GTP-binding protein Era [[Clostridium] sticklandii]
Length = 305
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 94/177 (53%), Gaps = 15/177 (8%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V IIG PN GKS+++N +VG K+A +S K TT +++ + + QI DTPG+
Sbjct: 12 KSGFVSIIGRPNVGKSTLMNSLVGEKIAIMSDKPQTTRNQIRAIYNDDEMQIVFMDTPGI 71
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
++ +KV + S++ +V++ V D + + DS +I ++ K
Sbjct: 72 QKPQNRLGDYMLKV----SHSSMRDTDVILFVVDDSKSIGKKDSDIIETLK------TNK 121
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYL 310
K++L +NK+D ++ K++L+ + + + ++ I S LKG +K L +Y+
Sbjct: 122 SKKILAINKIDKLS-KEELMDLINMYSKIGIFDEIVPVSALKGTNNNTLIKVLAKYM 177
>gi|293400673|ref|ZP_06644818.1| GTP-binding protein Era [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305699|gb|EFE46943.1| GTP-binding protein Era [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 301
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 11/171 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS + IIG PNAGKS+++N ++ K+A + K TT + + G++T+ D Q DTPG+
Sbjct: 4 KSGFIAIIGRPNAGKSTLLNALLNEKIAITTPKPQTTRNNISGILTREDAQFIFTDTPGI 63
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K H+ K +A++A+ +V V D + S D L+E++ + P
Sbjct: 64 HKPK----HELGKTLNRNAYTAIAEADVNFWVVDATQSFGSGDE---FLLEKIKQSHIPC 116
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
L +NK+DL+ K+K L++ +Q++ + IF S L+ L L +
Sbjct: 117 ---FLILNKIDLLDKEK-LIRTLQQWQERHTFAEIFPVSALQKDNLNDLLE 163
>gi|167854943|ref|ZP_02477718.1| GTP-binding protein Era [Haemophilus parasuis 29755]
gi|219870403|ref|YP_002474778.1| GTP-binding protein Era [Haemophilus parasuis SH0165]
gi|254783657|sp|B8F3C8.1|ERA_HAEPS RecName: Full=GTPase Era
gi|167853900|gb|EDS25139.1| GTP-binding protein Era [Haemophilus parasuis 29755]
gi|219690607|gb|ACL31830.1| GTP-binding protein Era binding 16S rRNA and 30S ribosome
[Haemophilus parasuis SH0165]
Length = 300
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 92/183 (50%), Gaps = 12/183 (6%)
Query: 136 DQKSVA--VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
DQK+ + I+G PN GKS+++N ++G K++ SRK TT H +LG+ T+ Q D
Sbjct: 3 DQKTYCGFIAIVGRPNVGKSTLLNKILGQKISITSRKAQTTRHRILGIKTEGAYQEIYVD 62
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPGL + + K R+ + +A + +V MV+F V + D ++ + K
Sbjct: 63 TPGLHIEE-----KRAINRLMNRAAASAIGDVDMVIFVVEGTKWTDDDEMV-----LNKL 112
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
K +L +NKVD + +K++LL ++ I S +G + L +++ E
Sbjct: 113 RSTKAPVILAINKVDNIKEKEELLPHLTALSQKFPFKEIIPISAQRGKNVHILEKFVRES 172
Query: 314 FKD 316
K+
Sbjct: 173 LKE 175
>gi|191638504|ref|YP_001987670.1| GTP-binding protein Era [Lactobacillus casei BL23]
gi|385820212|ref|YP_005856599.1| GTP-binding protein Era [Lactobacillus casei LC2W]
gi|385823409|ref|YP_005859751.1| GTP-binding protein Era [Lactobacillus casei BD-II]
gi|409997364|ref|YP_006751765.1| GTPase Era [Lactobacillus casei W56]
gi|226741221|sp|B3WEL1.1|ERA_LACCB RecName: Full=GTPase Era
gi|190712806|emb|CAQ66812.1| GTP-binding protein era homolog [Lactobacillus casei BL23]
gi|327382539|gb|AEA54015.1| GTP-binding protein Era [Lactobacillus casei LC2W]
gi|327385736|gb|AEA57210.1| GTP-binding protein Era [Lactobacillus casei BD-II]
gi|406358376|emb|CCK22646.1| GTPase Era [Lactobacillus casei W56]
Length = 300
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 13/174 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIG PN GKS+ +N ++G K+A +S K TT +++ G+ T D QI DTPG+ K
Sbjct: 9 VAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPGIHKPK 68
Query: 202 SGY-SHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKR 260
+ ++ D ++A S +N + ++ + + D ++R + A K+
Sbjct: 69 NELDTYMD-----KAALSTLNQVDAILFMVEADEEKGPGDGYIMR------QLAEVKKPV 117
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+DLV K DLL + E ++H + ++F S G + L L +
Sbjct: 118 YLIINKIDLV-KPDDLLPLIESYQHDYAFAQVFPISATMGNNVDELLTALTDAL 170
>gi|148255174|ref|YP_001239759.1| GTP-binding protein EngA [Bradyrhizobium sp. BTAi1]
gi|166224309|sp|A5EI59.1|DER_BRASB RecName: Full=GTPase Der; AltName: Full=GTP-binding protein EngA
gi|146407347|gb|ABQ35853.1| GTP-binding protein, essential for cell growth [Bradyrhizobium sp.
BTAi1]
Length = 456
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 19/197 (9%)
Query: 126 EEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKA 185
+E EE +E + + V I+G PNAGKS++IN+++G + S + TT + +
Sbjct: 171 DEHEETDEERAARPIRVAIVGRPNAGKSTLINHLLGEERLLTSPEAGTTRDSIAVEIEYK 230
Query: 186 DTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIR 245
IFDT GL +S K K+ V A AV EV++++ D D R+
Sbjct: 231 GRGFRIFDTAGLR-RRSRIEEKLEKLSVADALRAVRFAEVVVLMMDAQNRFEEQDLRIAD 289
Query: 246 LIERMGKQAPPKQKRVLCMNKVDLVTKK--------KDLLKVAEQFKHLPGYERIFMTSG 297
LIER G+ V+ +NK DL+ K D+ Q +P I SG
Sbjct: 290 LIEREGRAL------VIAVNKWDLMESKPGQISALRHDVDHWLPQVSGVP----IVAVSG 339
Query: 298 LKGAGLKALTQYLMEQF 314
L G G+ L Q ++E +
Sbjct: 340 LMGEGIDRLMQAIVESY 356
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 45/103 (43%), Gaps = 5/103 (4%)
Query: 139 SVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLM 198
S + IIG PN GKS++ N +VG K+A V T G D Q I DT GL
Sbjct: 2 SFTIAIIGRPNVGKSTLFNRLVGQKLALVDDMPGVTRDRREGEAKLGDLQFTIIDTAGL- 60
Query: 199 LNKSGYSHKDVKVRV-ESAWSAVNLFEVLMVVFDVHRHLTSPD 240
G + R+ E +A+ L + L V D LT D
Sbjct: 61 ---DGGPKGSLTARMQEQTETAIALADALFFVIDARAGLTPAD 100
>gi|29349243|ref|NP_812746.1| GTP-binding protein Era [Bacteroides thetaiotaomicron VPI-5482]
gi|298384784|ref|ZP_06994343.1| GTP-binding protein Era [Bacteroides sp. 1_1_14]
gi|380693595|ref|ZP_09858454.1| GTPase Era [Bacteroides faecis MAJ27]
gi|383120154|ref|ZP_09940886.1| GTP-binding protein Era [Bacteroides sp. 1_1_6]
gi|29341151|gb|AAO78940.1| putative GTP-binding protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251837313|gb|EES65413.1| GTP-binding protein Era [Bacteroides sp. 1_1_6]
gi|298261928|gb|EFI04793.1| GTP-binding protein Era [Bacteroides sp. 1_1_14]
Length = 293
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 95/181 (52%), Gaps = 16/181 (8%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
K+ V I+G PN GKS+++N +VG +++ + K TT H ++G+ D QI DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPG 61
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
++ K Y ++ + + SA+ +VL+ V DV + +PD E MGK
Sbjct: 62 VL--KPNYKLQESMLNFST--SALTDADVLLYVTDV---VETPDKNN----EFMGKVRQM 110
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
+L +NK+DL ++K L+K+ E++K L I S A K Y+M++ ++
Sbjct: 111 TVPVLLLINKIDLTDQEK-LIKLVEEWKELLPQAEIIPIS----AASKFNVDYVMKRIQE 165
Query: 317 L 317
L
Sbjct: 166 L 166
>gi|329117153|ref|ZP_08245870.1| ribosome biogenesis GTPase Era [Streptococcus parauberis NCFD 2020]
gi|326907558|gb|EGE54472.1| ribosome biogenesis GTPase Era [Streptococcus parauberis NCFD 2020]
Length = 299
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 90/179 (50%), Gaps = 11/179 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+ +NY++G K+A +S K TT ++++G+ T QI DTPG+
Sbjct: 4 KSGFVAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGI 63
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ VESA+S + E ++ + D + IER+ P
Sbjct: 64 HKPKTALGD----FMVESAYSTLREVETVIFMVPADEKRGKGDDMI---IERLKTAKIP- 115
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
+L +NK+D V + LL+ + F++ ++ + S L+G + L + L + ++
Sbjct: 116 --VILVINKIDKVHPDQ-LLEQIDDFRNQMDFKEVVPISALQGNNVNPLMEILKDNLEE 171
>gi|237807624|ref|YP_002892064.1| GTP-binding protein Era [Tolumonas auensis DSM 9187]
gi|237499885|gb|ACQ92478.1| GTP-binding protein Era [Tolumonas auensis DSM 9187]
Length = 300
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 85/174 (48%), Gaps = 12/174 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
EE V I+G PN GKS+++N ++G KV+ SRK TT H +LG+ T+ Q D
Sbjct: 3 EEKTYCGFVAIVGRPNVGKSTLLNKLLGQKVSITSRKPQTTRHRILGIDTQGAYQTIFVD 62
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGK 252
TPGL + + K R+ + + +L +V MVVF V H T D V+ + M
Sbjct: 63 TPGLHIEE-----KRAINRLMNRAATSSLGDVEMVVFVVDGTHWTDDDEMVLNKLRHM-- 115
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
P VL +NKVD++ K+ LL + + I S KG ++ +
Sbjct: 116 HCPV----VLAVNKVDVIKDKEILLPHLQMLAQKGNFAEILPISAEKGTNVEKI 165
>gi|157374288|ref|YP_001472888.1| GTP-binding protein Era [Shewanella sediminis HAW-EB3]
gi|157316662|gb|ABV35760.1| GTP-binding protein Era [Shewanella sediminis HAW-EB3]
Length = 335
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 86/172 (50%), Gaps = 10/172 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N ++G K++ S+K TT H ++G+ T Q+ DTPGL +
Sbjct: 44 VAIVGRPNVGKSTLLNKLLGQKISITSKKPQTTRHRIMGIHTDGARQVVFIDTPGLHM-- 101
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAPPKQKR 260
K R+ + +A +L EV +V+F V T D V+R ++ +K
Sbjct: 102 ---EEKRAINRLMNRAAASSLAEVSLVIFVVDGMTWTDDDEMVLRKLQ----SRDDGRKT 154
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
VL +NKVD + K+ L E+ ++ I S +G ++ + +E
Sbjct: 155 VLAINKVDNIKDKEALFPYLEELSKKFEFDEILPISATQGTNVQRILDMSVE 206
>gi|389756847|ref|ZP_10191586.1| GTPase Era [Rhodanobacter sp. 115]
gi|388431196|gb|EIL88289.1| GTPase Era [Rhodanobacter sp. 115]
Length = 311
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 10/184 (5%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
E+ ED + V + G PN GKS+++N ++G +++ VS + TT H +LG+ QI
Sbjct: 12 ELPHEDYRCGLVALAGRPNVGKSTLLNALIGFRLSIVSPRPQTTRHRILGIANSDAGQIM 71
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM 250
DTPGL ++ + V SA S V E+ + V + R ++ L E+
Sbjct: 72 YVDTPGLHRGAKRAMNRSLNRAVRSAISEV---ELAVQVIEAGRWTDEDEALYAALAEQ- 127
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K R+L +NKVDL K LL + ++ I S LK GL+ L + +
Sbjct: 128 ------KLPRLLVINKVDLSKDKTALLPFVAELGSTHHFDAIHYVSALKRKGLEQLQRDI 181
Query: 311 MEQF 314
+ +
Sbjct: 182 LSRL 185
>gi|365122467|ref|ZP_09339370.1| GTP-binding protein Era [Tannerella sp. 6_1_58FAA_CT1]
gi|363642707|gb|EHL82053.1| GTP-binding protein Era [Tannerella sp. 6_1_58FAA_CT1]
Length = 294
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 99/182 (54%), Gaps = 17/182 (9%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
K+ V I+G PN GKS+++N +VG +++ ++ K TT H ++G++ D QI DTPG
Sbjct: 2 HKAGFVNIVGNPNVGKSTLMNSLVGERISIITSKAQTTRHRIMGIVNTDDMQIVYSDTPG 61
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
++ ++K + + + SA+ ++L+ V DV T ++R+ Q+ P
Sbjct: 62 VL----SPNYKLQESMLNFSQSALVDADILLYVTDVVEMPTKNQG----FLDRVASQSVP 113
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKH-LPGYERIFMTSGLKGAGLKALTQYLMEQFK 315
+L +NKVDL+ +KDL ++ E++ LP E I ++ A K YL+++ +
Sbjct: 114 ---VLLLINKVDLLKDQKDLERLVEEWHSLLPNAEIIPVS-----AQYKFNLDYLLKRIQ 165
Query: 316 DL 317
+L
Sbjct: 166 EL 167
>gi|239637621|ref|ZP_04678593.1| GTP-binding protein Era [Staphylococcus warneri L37603]
gi|239596839|gb|EEQ79364.1| GTP-binding protein Era [Staphylococcus warneri L37603]
Length = 299
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 95/181 (52%), Gaps = 15/181 (8%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D ++V A + ++ + +M + +V+ + D ++ +++ +
Sbjct: 63 G--IHKPKHKLGDYMMKV--ATNTLSEIDAIMFMVNVNEDIGRGDEYIMDMLKDL----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYLM 311
K L +NK+DLV + K+ E+++ + I S L+G + L YL
Sbjct: 114 -KTPVFLVLNKIDLVHPDALMPKI-EKYQEYMDFTEIVPISALEGLNVDHFIDVLKSYLP 171
Query: 312 E 312
E
Sbjct: 172 E 172
>gi|389795665|ref|ZP_10198779.1| GTPase Era [Rhodanobacter fulvus Jip2]
gi|388430317|gb|EIL87491.1| GTPase Era [Rhodanobacter fulvus Jip2]
Length = 309
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 10/180 (5%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ + V + G PN GKS+++N ++G +++ +S + TT H +LG+ T QI DT
Sbjct: 14 ENYRCGTVALAGRPNVGKSTLLNALIGFRLSIISPRPQTTRHRILGINTTEAGQIMYVDT 73
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PGL ++ + SA S V+L ++ + + R ++ L+E Q
Sbjct: 74 PGLHRGAKRAMNRSLNRAARSAISDVDL---VVQLIEAGRWTDEDEALYAALVE----QT 126
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
P R+L +NKVDL K +L + Y+ I S LK GLK L Q ++++
Sbjct: 127 TP---RLLVINKVDLNKDKTVMLPFVAELVAKHTYDEIHYVSALKEQGLKELEQAILKRL 183
>gi|226311653|ref|YP_002771547.1| GTP-binding protein [Brevibacillus brevis NBRC 100599]
gi|226094601|dbj|BAH43043.1| probable GTP-binding protein [Brevibacillus brevis NBRC 100599]
Length = 305
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 95/179 (53%), Gaps = 11/179 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N++VG K+A +S K TT +++ V T + QI DTPG+
Sbjct: 11 KSGFVSIVGRPNVGKSTLLNHIVGHKIAIMSNKPQTTRNKITAVHTTEEGQIIFLDTPGI 70
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+S + V V A + +N ++++ V D + D + IER+ + P
Sbjct: 71 HKPQSKLGNYMVSV----AENTLNEVDLVLFVVDATEKRGAGDDYI---IERLKQVKTPV 123
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
L +NK+D V + LL + + ++ L +++I S L+G +L Q ++ + ++
Sbjct: 124 ---FLVINKIDKVHPEA-LLPIIDDYRKLYDFKQIVPISALEGNNTASLQQAILGEMEE 178
>gi|452821238|gb|EME28271.1| GTP-binding protein Era [Galdieria sulphuraria]
Length = 504
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 34/210 (16%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTT--THEVLGVMTKADTQICIF 192
E QK+ +V +IG PNAGKS+++N ++G KV AVSRK NTT TH V +T+ + Q+ I+
Sbjct: 184 EQQKTASVAVIGLPNAGKSTLLNRLLGNKVVAVSRKRNTTRKTHSVY--VTRDEKQLLIY 241
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSR--VIRLIERM 250
DTPG++ + + + +AW+A +V V+ D + ++ +I L +RM
Sbjct: 242 DTPGMIGSDDAAKVHHERAFLVAAWNAAWNADVCFVIVDCSCRIAREATKRMLIELKQRM 301
Query: 251 GKQAPP----------------------------KQKRVLCMNKVDLVTKKKDLLKVAEQ 282
+Q KQ +L +NKVD + ++ L +A++
Sbjct: 302 EEQGKEFIRNILTQQEAESIQKNEVREEQIRSNNKQVWILGLNKVDHLANRQYLPDMAKE 361
Query: 283 FKHLPGYERIFMTSGLKGAGLKALTQYLME 312
F + FM S K G+ + +L E
Sbjct: 362 FYDTFPFAMSFMISAKKDKGIDHVRDFLFE 391
>gi|153208710|ref|ZP_01946957.1| GTP-binding protein Era [Coxiella burnetii 'MSU Goat Q177']
gi|154707451|ref|YP_001423900.1| GTP-binding protein Era [Coxiella burnetii Dugway 5J108-111]
gi|165919312|ref|ZP_02219398.1| GTP-binding protein Era [Coxiella burnetii Q321]
gi|212219221|ref|YP_002306008.1| GTP-binding protein Era [Coxiella burnetii CbuK_Q154]
gi|189037264|sp|A9KFA1.1|ERA_COXBN RecName: Full=GTPase Era
gi|226741202|sp|B6J4J8.1|ERA_COXB1 RecName: Full=GTPase Era
gi|120575821|gb|EAX32445.1| GTP-binding protein Era [Coxiella burnetii 'MSU Goat Q177']
gi|154356737|gb|ABS78199.1| GTP-binding protein [Coxiella burnetii Dugway 5J108-111]
gi|165916972|gb|EDR35576.1| GTP-binding protein Era [Coxiella burnetii Q321]
gi|212013483|gb|ACJ20863.1| GTP-binding protein era [Coxiella burnetii CbuK_Q154]
Length = 295
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 143 GIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKS 202
IIG PN GKS+++N ++G K++ SRK TT +++LGV T D Q+ DTPGL
Sbjct: 10 AIIGRPNVGKSTLLNQLLGQKISITSRKPQTTRYQILGVKTFKDIQVIYVDTPGLHAGTE 69
Query: 203 GYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVL 262
++ + A L +V +VF + H S D+ V+ ++ + + P L
Sbjct: 70 RTINRYMNRTARGA-----LRDVDAIVFVIEPHWESQDAWVLDNLKEI--ETPV----FL 118
Query: 263 CMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
+NKVD + + +LL + E+ L +++I S G + L Q
Sbjct: 119 VINKVDKIKNRAELLPLIEKVSSLYAFQKIIPLSAKTGDQVGTLEQ 164
>gi|420262413|ref|ZP_14765054.1| GTP-binding protein Era [Enterococcus sp. C1]
gi|394770170|gb|EJF49974.1| GTP-binding protein Era [Enterococcus sp. C1]
Length = 299
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
KS V I+G PN GKS+++N +VG K+A +S K TT +++ GV T D Q+ DTPG
Sbjct: 4 HKSGFVAIVGRPNVGKSTLLNRVVGQKIAIMSDKAQTTRNKIQGVYTTDDAQLIFIDTPG 63
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ K H+ VE+A+SA+ +V + + + D + IER+ + P
Sbjct: 64 IHKPK----HRLGDFMVETAYSALREVDVTLFMISADQKRGKGDDFI---IERLRQSQTP 116
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+D V LL + E + + I S +G + L + L+++
Sbjct: 117 V---FLVINKIDKVHPDA-LLAIIEDYSSQMDFAEIVPISATEGNNFETLMKLLVDEM 170
>gi|345859663|ref|ZP_08812000.1| GTP-binding protein Era [Desulfosporosinus sp. OT]
gi|344327259|gb|EGW38700.1| GTP-binding protein Era [Desulfosporosinus sp. OT]
Length = 304
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 16/185 (8%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
K + +S V +IG PNAGKS+++N+++G KV +S K TT + + ++T+ QI
Sbjct: 5 KSNEFRSGFVSVIGRPNAGKSTLLNHLLGQKVLIMSDKPQTTRNRIQCILTEERGQIIFL 64
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGK 252
DTPG+ K HK + V A ++ +V++ + D+ + +I ++
Sbjct: 65 DTPGIHKPK----HKLGEYMVGKAKESMREVDVILYMVDLSAEYGPGEEFIIEML----- 115
Query: 253 QAPPKQKRVLC---MNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQY 309
KQ RV C +NKVDL+ K+ L++ +QF L ++ I S G L +
Sbjct: 116 ----KQTRVPCVLVLNKVDLLASKEQLMRKIQQFSALVDFKAIVPVSAKTGENTDELLKV 171
Query: 310 LMEQF 314
+ Q
Sbjct: 172 IFNQL 176
>gi|398378515|ref|ZP_10536675.1| GTP-binding protein Era [Rhizobium sp. AP16]
gi|397724706|gb|EJK85170.1| GTP-binding protein Era [Rhizobium sp. AP16]
Length = 319
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N +VG KV+ VS K TT V G+ + QI DTPG+ +
Sbjct: 29 VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAIVRGIAIHDNAQIVFMDTPGIFKPR 88
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW +++M++ D R + D+ I +E + + PK +
Sbjct: 89 RRLD----RAMVTSAWGGAKDADLIMLLIDSERGIRG-DAEAI--LEGLKEVFQPK---I 138
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V +++DLL +A ++ FM S G+G + YL
Sbjct: 139 LVLNKIDRV-RREDLLALAAAANEKIAFQETFMVSAENGSGCDDVMNYL 186
>gi|199599319|ref|ZP_03212717.1| GTPase [Lactobacillus rhamnosus HN001]
gi|258508545|ref|YP_003171296.1| GTP-binding protein era [Lactobacillus rhamnosus GG]
gi|385828207|ref|YP_005865979.1| GTP-binding protein Era [Lactobacillus rhamnosus GG]
gi|418070731|ref|ZP_12708006.1| GTPase Era [Lactobacillus rhamnosus R0011]
gi|199589758|gb|EDY97866.1| GTPase [Lactobacillus rhamnosus HN001]
gi|257148472|emb|CAR87445.1| GTP-binding protein era [Lactobacillus rhamnosus GG]
gi|259649852|dbj|BAI42014.1| GTP-binding protein Era [Lactobacillus rhamnosus GG]
gi|357540151|gb|EHJ24168.1| GTPase Era [Lactobacillus rhamnosus R0011]
Length = 300
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 17/172 (9%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIG PN GKS+ +N ++G K+A +S K TT +++ G+ T D QI DTPG+ K
Sbjct: 9 VAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPGIHKPK 68
Query: 202 S---GYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQ 258
+ Y K +A S +N + ++ + + D+ ++R + A K+
Sbjct: 69 NELDDYMDK-------AALSTLNQVDAILFMVAADEQKGAGDAYILR------QLAEVKK 115
Query: 259 KRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+DLV K DLL + E ++H + ++F S G + L L
Sbjct: 116 PVYLILNKIDLV-KPDDLLPLIESYQHDYHFAQVFPISATMGNNVDELLNSL 166
>gi|387129389|ref|YP_006292279.1| GTP-binding protein Era [Methylophaga sp. JAM7]
gi|386270678|gb|AFJ01592.1| GTP-binding protein Era [Methylophaga sp. JAM7]
Length = 301
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 86/177 (48%), Gaps = 17/177 (9%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG PN GKS++IN ++G K+ SR+ TT H VLG+ T Q+ DTPGL
Sbjct: 7 RSGYVAVIGRPNVGKSTLINRILGQKLCITSRRPQTTRHRVLGIKTTETAQLIYVDTPGL 66
Query: 198 MLNKSGYSHKDVKV---RVESAWSAVNLFEVLMVVFDVHR-HLTSPDSRVIRLIERMGKQ 253
H D K R + +A ++ +V +V+F V T D V+ ++R
Sbjct: 67 --------HSDGKRAMNRYMNRAAAASIDDVDVVIFMVDSLSWTDEDEAVLNRLQR-SAV 117
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
AP VL +NKVD + K LL EQ + + S KG +++L L
Sbjct: 118 APV----VLVLNKVDKINDKAALLPQIEQLSQRFDFADVVPVSARKGMNIESLESTL 170
>gi|82751170|ref|YP_416911.1| GTP-binding protein Era [Staphylococcus aureus RF122]
gi|123547823|sp|Q2YT12.1|ERA_STAAB RecName: Full=GTPase Era
gi|82656701|emb|CAI81128.1| GTP-binding protein [Staphylococcus aureus RF122]
Length = 299
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K HK ++ A + ++ + +M + + + + D +I +++ +
Sbjct: 63 GIHKPK----HKLGDYMMKVAKNTLSEIDAIMFMVNANEEIGRGDEYIIEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV +L+ E+++ + I S L G + L
Sbjct: 114 -KTPVFLVLNKIDLV-HPDELMPKIEEYQSYMDFTEIVPISALDGLNVDHFIDVL 166
>gi|374324897|ref|YP_005078026.1| GTPase Era [Paenibacillus terrae HPL-003]
gi|357203906|gb|AET61803.1| GTPase Era [Paenibacillus terrae HPL-003]
Length = 300
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 11/171 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N+++G K+A +S K TT +++ GV T DTQI DTPG+
Sbjct: 7 KSGFVAIVGRPNVGKSTLMNHVIGQKIAIMSDKPQTTRNKIHGVFTTEDTQIVFLDTPGI 66
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+S ++A++ + E ++ + D L D R I KQ K
Sbjct: 67 HKRQSKLG----DYMNQTAFNTLGEVEAVLFLIDAAEGLGGGD----RFIAEQLKQV--K 116
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
+L +NK+D + + + LL + EQ++ L + I S G + L +
Sbjct: 117 TPVILVLNKIDRI-EPEALLPLIEQYRKLYDFAEIVPISAKMGNNVNRLLE 166
>gi|313202782|ref|YP_004041439.1| GTP-binding protein era [Paludibacter propionicigenes WB4]
gi|312442098|gb|ADQ78454.1| GTP-binding protein Era [Paludibacter propionicigenes WB4]
Length = 293
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 93/170 (54%), Gaps = 12/170 (7%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
KS V I+G PN GKS+++N +VG +++ ++ K TT H +LG++ D QI DTPG
Sbjct: 2 HKSGFVNIVGNPNVGKSTLMNALVGERISIITSKAQTTRHRILGIVNGDDFQIVYSDTPG 61
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
++ K Y ++ ++ + SA++ +VL+ V DV + +E++ P
Sbjct: 62 VL--KPNYRLQESMLKF--SRSALSDADVLLYVTDVFDSYEKNED----FVEKVKLNPAP 113
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
+L +NK+DL+ ++K L+ + E++K L I+ S L+ + +L
Sbjct: 114 ---LLLIINKIDLIDEEK-LVVLVEKWKELLPRAEIYPVSALEKFNIDSL 159
>gi|373501195|ref|ZP_09591560.1| GTP-binding protein Era [Prevotella micans F0438]
gi|371950102|gb|EHO67961.1| GTP-binding protein Era [Prevotella micans F0438]
Length = 293
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 92/171 (53%), Gaps = 12/171 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N +VG K++ + K TT H ++G++ +DTQI DTPG++ K
Sbjct: 7 VNIVGNPNVGKSTLMNQLVGEKISIATFKAQTTRHRIMGIVNTSDTQIVFSDTPGVL--K 64
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
Y +++ ++ SA+ ++L+ V DV + +P+ + + K + +
Sbjct: 65 PNYKMQEMMLQFSE--SALTDADILLYVTDV---VENPEKNA----DFLAKVSNINTPVI 115
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L +NK+DL+ +K+ + V + + LP E I S G+ L + + E
Sbjct: 116 LLINKIDLINQKQLIALVDKWHRLLPNAE-ILPISAQNKFGIDTLMKRIEE 165
>gi|195978544|ref|YP_002123788.1| GTP-binding protein Era [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|414564511|ref|YP_006043472.1| GTP-binding protein Era [Streptococcus equi subsp. zooepidemicus
ATCC 35246]
gi|226741237|sp|B4U458.1|ERA_STREM RecName: Full=GTPase Era
gi|195975249|gb|ACG62775.1| GTP-binding protein Era-like [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|338847576|gb|AEJ25788.1| GTP-binding protein Era [Streptococcus equi subsp. zooepidemicus
ATCC 35246]
Length = 298
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 90/179 (50%), Gaps = 11/179 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+ +N+++G K+A +S K TT ++++G+ T QI DTPG+
Sbjct: 3 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGI 62
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ VESA+S + E ++ + D + IER+ P
Sbjct: 63 HKPKTALG----DFMVESAYSTLREVETVLFMVPADEKRGKGDDMI---IERLKAARIP- 114
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
+L +NK+D V + LL+ + F+ ++ I S L+G ++ L Q L + ++
Sbjct: 115 --VILVINKIDKVHPDQ-LLEQIDDFRSQMDFKEIVPISALQGNNVETLVQLLKDNLEE 170
>gi|146329627|ref|YP_001209600.1| GTP-binding protein Era [Dichelobacter nodosus VCS1703A]
gi|146233097|gb|ABQ14075.1| GTP-binding protein Era [Dichelobacter nodosus VCS1703A]
Length = 299
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 20/174 (11%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ ++G PN GKS++IN+++G K+A SRK TT +LG+ ++ D Q+ DTPG+
Sbjct: 8 IAVVGRPNVGKSTLINHLLGQKIAITSRKPQTTRQALLGIYSEDDVQMVFVDTPGI---- 63
Query: 202 SGYSHKDVKVRVE-----SAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
H+D K + +AW +++ +V++ V +V R D+R+ I +M
Sbjct: 64 ----HRDGKKAINRQMNRAAWQSMHDVDVILHVSEVKR-WEEDDARIAAEIAQM------ 112
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K V +NK+D + K DL + + + + I S + L+ L + L
Sbjct: 113 KVPAVHVVNKIDRLKDKADLFPELQARQSIANWAAIVPVSAARSQNLEELLRVL 166
>gi|308048450|ref|YP_003912016.1| GTP-binding protein Era [Ferrimonas balearica DSM 9799]
gi|307630640|gb|ADN74942.1| GTP-binding protein Era [Ferrimonas balearica DSM 9799]
Length = 302
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 10/166 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N ++G KV+ SRK TT H ++G+ T+ Q DTPGL + +
Sbjct: 11 VAIVGRPNVGKSTLLNRLLGQKVSITSRKPQTTRHRIMGIHTEGAYQTIFVDTPGLHVEE 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQAPPKQKR 260
K R+ + +A ++ +V MV+ V T+ D V+ I R +K
Sbjct: 71 -----KRAINRLMNRAAASSIGDVEMVIMMVEGTKWTADDQMVLNKIRR----GAETRKT 121
Query: 261 VLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
VL +NKVD + +K DL+ + + ++ I S KG ++ L
Sbjct: 122 VLVINKVDQIKEKADLIPHLQWLQEQFPFDAIIPMSAGKGDDIQPL 167
>gi|417643133|ref|ZP_12293195.1| ribosome biogenesis GTPase Era [Staphylococcus warneri VCU121]
gi|330686118|gb|EGG97739.1| ribosome biogenesis GTPase Era [Staphylococcus epidermidis VCU121]
Length = 299
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 15/181 (8%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ G+MT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGIMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K HK ++ A + ++ + +M + +V+ + D ++ +++ +
Sbjct: 63 GIHKPK----HKLGDYMMKVATNTLSEIDAIMFMVNVNEDIGRGDEYIMDMLKDL----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYLM 311
K L +NK+DLV + K+ E+++ + I S L+G + L YL
Sbjct: 114 -KTPVFLVLNKIDLVHPDALMPKI-EKYQEYMNFTEIVPISALEGLNVDHFIDVLKSYLP 171
Query: 312 E 312
E
Sbjct: 172 E 172
>gi|341820912|emb|CCC57231.1| GTP-binding protein Era [Weissella thailandensis fsh4-2]
Length = 302
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 98/183 (53%), Gaps = 11/183 (6%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
+ E++ KS + ++G PN GKS+++N M+G K+A +S K TT +++ G+ T + Q+
Sbjct: 1 MSEQEFKSGFIALVGRPNVGKSTLLNKMIGEKIAIMSPKAQTTRNKIQGIYTTNEGQMVF 60
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMG 251
DTPG ++K S D V+ +A SA+ +++ ++ + + D +I R+
Sbjct: 61 MDTPG--IHKPHNSLGDYMVK--TAMSALRESDMVWLLVNADQERGVGDDFIIN---RLK 113
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
+ P L +NKVDL+ + + L ++A+ + + IF S L G G+ L ++ M
Sbjct: 114 ESNTPV---YLIINKVDLIDRAEVLNQIADYNAQM-DFAEIFPISALTGEGVPELLRFTM 169
Query: 312 EQF 314
+
Sbjct: 170 DHM 172
>gi|218247339|ref|YP_002372710.1| GTP-binding protein Era [Cyanothece sp. PCC 8801]
gi|226741204|sp|B7K414.1|ERA_CYAP8 RecName: Full=GTPase Era
gi|218167817|gb|ACK66554.1| GTP-binding protein Era [Cyanothece sp. PCC 8801]
Length = 314
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 76/137 (55%), Gaps = 10/137 (7%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
+ E KS VGIIG PN GKS+++N +VG K+A S + TT + + G++T + QI
Sbjct: 15 IAPEGFKSGFVGIIGRPNVGKSTLMNQLVGQKIAITSPVSQTTRNRLRGILTTEEAQIIF 74
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMG 251
DTPG ++K H+ K+ V++A +A+N ++++VV D D ++ L+E
Sbjct: 75 VDTPG--IHKP--HHQLGKILVQNAEAAINAVDIILVVVDSSIEAGGGDRYIVELLENT- 129
Query: 252 KQAPPKQKRVLCMNKVD 268
+ +L +NK D
Sbjct: 130 -----ETPVILGLNKSD 141
>gi|328957481|ref|YP_004374867.1| GTP-binding protein Era [Carnobacterium sp. 17-4]
gi|328673805|gb|AEB29851.1| GTP-binding protein Era [Carnobacterium sp. 17-4]
Length = 302
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 92/179 (51%), Gaps = 15/179 (8%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V I+G PN GKS+++N +VG K+A +S K TT +++ G+ T ++QI DTP
Sbjct: 6 EHKSGFVSIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTTPESQIVFIDTP 65
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K H+ V SA+SA +V++ + ++ D+ + M K
Sbjct: 66 GIHKPK----HRLGDFMVNSAFSAFREVDVILFMVNITEKRGPGDNFI------MEKLKT 115
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKALTQYL 310
K L +NK+D + + LL + E ++ L + ++ S +G L+ +T+YL
Sbjct: 116 VKSPVFLVLNKIDKIHPDQ-LLPIIEDYRSLVDFAQVIPISASEGNNVDTLLEEITKYL 173
>gi|222085391|ref|YP_002543921.1| GTP-binding protein Era [Agrobacterium radiobacter K84]
gi|221722839|gb|ACM25995.1| GTP-binding protein Era [Agrobacterium radiobacter K84]
Length = 327
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG NAGKS+++N +VG KV+ VS K TT V G+ + QI DTPG+ +
Sbjct: 37 VALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAIVRGIAIHDNAQIVFMDTPGIFKPR 96
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V SAW +++M++ D R + D+ I +E + + PK +
Sbjct: 97 RRLD----RAMVTSAWGGAKDADLIMLLIDSERGIRG-DAEAI--LEGLKEVFQPK---I 146
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V +++DLL +A ++ FM S G+G + YL
Sbjct: 147 LVLNKIDRV-RREDLLALAAAANEKIAFQETFMVSAENGSGCDDVMNYL 194
>gi|169829166|ref|YP_001699324.1| GTP-binding protein Era [Lysinibacillus sphaericus C3-41]
gi|254783660|sp|B1HTJ0.1|ERA_LYSSC RecName: Full=GTPase Era
gi|168993654|gb|ACA41194.1| GTP-binding protein era-like protein (Bex protein) [Lysinibacillus
sphaericus C3-41]
Length = 305
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 91/173 (52%), Gaps = 11/173 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS + IIG PN GKS+ +N ++G K+A +S K TT ++V GV+T D+Q+ DTPG
Sbjct: 9 KSGFISIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTTTDSQMIFIDTPG- 67
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
++K + D ++V A + + +V+M + + + L D ++ ++ G P
Sbjct: 68 -IHKPKHKLGDFMLKV--AKNTLREVDVIMFMVNAEQKLGKGDEFILEMLA--GNSTPV- 121
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D + +LL + E +K + I S L+G +++L L
Sbjct: 122 ---FLVINKIDQI-HPDELLGIIESYKERYEFAEIIPISALQGNNVESLLDTL 170
>gi|257061326|ref|YP_003139214.1| GTP-binding protein Era [Cyanothece sp. PCC 8802]
gi|256591492|gb|ACV02379.1| GTP-binding protein Era [Cyanothece sp. PCC 8802]
Length = 314
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 76/137 (55%), Gaps = 10/137 (7%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
+ E KS VGIIG PN GKS+++N +VG K+A S + TT + + G++T + QI
Sbjct: 15 IAPEGFKSGFVGIIGRPNVGKSTLMNQLVGQKIAITSPVSQTTRNRLRGILTTEEAQIIF 74
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMG 251
DTPG ++K H+ K+ V++A +A+N ++++VV D D ++ L+E
Sbjct: 75 VDTPG--IHKP--HHQLGKILVQNAEAAINAVDIILVVVDSSIEAGGGDRYIVELLENT- 129
Query: 252 KQAPPKQKRVLCMNKVD 268
+ +L +NK D
Sbjct: 130 -----ETPVILGLNKSD 141
>gi|188585831|ref|YP_001917376.1| GTP-binding protein Era [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179350518|gb|ACB84788.1| GTP-binding protein Era [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 297
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
++EE S V +IG PNAGKS++INY++G KV S K TT +++ V ++QI
Sbjct: 1 MEEEIFYSGFVSVIGRPNAGKSTLINYILGEKVVITSDKPQTTRNKIQCVYNGENSQIIF 60
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMG 251
DTPG+ K K VK ES +N + ++ V DV ++ L+ER+
Sbjct: 61 LDTPGMHKPKHKLGEKMVKAVDES----LNEMDAILFVIDVSVPFGKGET---MLVERLA 113
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLK-VAEQFKHLPGYERIFMTSGLKGAGLKAL 306
+ + P +L MNK+DLV +DL + E+ K E I S L G L L
Sbjct: 114 RLSTPV---ILVMNKMDLVD--EDLAREKTEKIKEKLSPESIHYISALYGNNLVDL 164
>gi|421600251|ref|ZP_16043297.1| GTP-binding protein Der [Bradyrhizobium sp. CCGE-LA001]
gi|404267634|gb|EJZ32268.1| GTP-binding protein Der [Bradyrhizobium sp. CCGE-LA001]
Length = 458
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 22/201 (10%)
Query: 125 QEEEEEEVKEED--QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVM 182
++E++ + EE+ + + V I+G PNAGKS++IN+++G + S + TT + +
Sbjct: 169 EDEDDAPISEEEVATRPIRVAIVGRPNAGKSTLINHLLGEERLLTSPEAGTTRDSIAVEI 228
Query: 183 TKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSR 242
+FDT GL +S K K+ V A AV EV++++ D D R
Sbjct: 229 NWKGRDFRVFDTAGLR-RRSRIEEKLEKLSVADALRAVRFAEVVVLMMDTQNRFEEQDLR 287
Query: 243 VIRLIERMGKQAPPKQKRVLCMNKVDLVTKK---------KDLLKVAEQFKHLPGYERIF 293
+ LIER G+ VL +NK DL+ K +D Q K +P I
Sbjct: 288 IADLIEREGRAV------VLAVNKWDLMETKGGGAISGLRRDADHWLPQLKGVP----IV 337
Query: 294 MTSGLKGAGLKALTQYLMEQF 314
SGL G G+ L Q + + +
Sbjct: 338 AVSGLMGEGIDRLMQAIQDAY 358
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 139 SVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLM 198
S + IIG PN GKS++ N +VG K+A V T G D + I DT GL
Sbjct: 2 SFTIAIIGRPNVGKSTLFNRLVGQKLALVDDLPGVTRDRREGEARLGDLEFTIIDTAGLD 61
Query: 199 LNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPD 240
G ++ + E +A+ + L V D LT D
Sbjct: 62 EGAKGSLTARMQEQTE---TAIAQADALFFVIDARVGLTPTD 100
>gi|323144163|ref|ZP_08078799.1| ribosome biogenesis GTPase Era [Succinatimonas hippei YIT 12066]
gi|322416071|gb|EFY06769.1| ribosome biogenesis GTPase Era [Succinatimonas hippei YIT 12066]
Length = 301
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 89/186 (47%), Gaps = 20/186 (10%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
E K V +IG PN GKS+++N+++G KV+ SR+ TT + VLG+ T+ + Q D
Sbjct: 2 ENSSKFGFVALIGRPNVGKSTLMNHLIGQKVSITSRRPQTTRNRVLGIDTQGEYQAVFVD 61
Query: 194 TPGLMLNKSGYSHKDVKVRVE-----SAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIE 248
TPGL HK+ K + +A SA+ E++++V D T D V IE
Sbjct: 62 TPGL--------HKEEKRAINRLMNRAAESALGDVELILLVVDATLW-TDDDEMVFSKIE 112
Query: 249 RMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
K VL +NK+D + K LL + E+ ++ I S L+ L L +
Sbjct: 113 N------TKVPVVLVINKIDKLHDKATLLPLIERLSKRVSFKAIVPVSALRSTNLDDLKK 166
Query: 309 YLMEQF 314
+ E
Sbjct: 167 LVFESL 172
>gi|389856232|ref|YP_006358475.1| GTP-binding protein Era [Streptococcus suis ST1]
gi|353739950|gb|AER20957.1| GTP-binding protein Era [Streptococcus suis ST1]
Length = 299
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+ +NY++G K+A +S K TT ++++G+ T + QI DTPG+
Sbjct: 4 KSGFVAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTEEEQIVFIDTPGI 63
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ VESA+S + + ++ + D + +ER+ KQA K
Sbjct: 64 HKPKTALGD----FMVESAYSTLREVDTVLFMVPADEKRGKGDDMI---MERL-KQA--K 113
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
+L +NK+D V + LL+ + F+ ++ I S ++G + L + L E
Sbjct: 114 VPVILVVNKIDKVHPDQ-LLEQIDDFRQQMDFKEIVPISAIQGNNVNRLMEILKENL 169
>gi|229552355|ref|ZP_04441080.1| GTP-binding protein Era [Lactobacillus rhamnosus LMS2-1]
gi|258539726|ref|YP_003174225.1| GTP-binding protein era [Lactobacillus rhamnosus Lc 705]
gi|385835375|ref|YP_005873149.1| GTP-binding protein Era [Lactobacillus rhamnosus ATCC 8530]
gi|229314337|gb|EEN80310.1| GTP-binding protein Era [Lactobacillus rhamnosus LMS2-1]
gi|257151402|emb|CAR90374.1| GTP-binding protein era [Lactobacillus rhamnosus Lc 705]
gi|355394866|gb|AER64296.1| GTP-binding protein Era [Lactobacillus rhamnosus ATCC 8530]
Length = 300
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 17/172 (9%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIG PN GKS+ +N ++G K+A +S K TT +++ G+ T D QI DTPG+ K
Sbjct: 9 VAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPGIHKPK 68
Query: 202 S---GYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQ 258
+ Y K +A S +N + ++ + + D+ ++R + A K+
Sbjct: 69 NELDDYMDK-------AALSTLNQVDAILFMVAADEQKGAGDAYILR------QLAEVKK 115
Query: 259 KRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+DLV K DLL + E ++H + ++F S G + L L
Sbjct: 116 PVYLILNKIDLV-KPDDLLPLIESYQHDYHFAQVFPISATMGNSVDELLNSL 166
>gi|260771274|ref|ZP_05880201.1| GTP-binding protein Era [Vibrio furnissii CIP 102972]
gi|375129946|ref|YP_004992045.1| GTP-binding protein Era [Vibrio furnissii NCTC 11218]
gi|260613871|gb|EEX39063.1| GTP-binding protein Era [Vibrio furnissii CIP 102972]
gi|315179119|gb|ADT86033.1| GTP-binding protein Era [Vibrio furnissii NCTC 11218]
Length = 321
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 74/143 (51%), Gaps = 10/143 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
++Q V I+G PN GKS+++N ++G K++ SRK TT H ++GV T D Q DT
Sbjct: 23 DNQHCGFVAIVGRPNVGKSTLLNNILGQKISITSRKPQTTRHRIMGVDTDGDYQAIYVDT 82
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
PGL + + ++ + S+ S VNL V VV H T+ D V + K
Sbjct: 83 PGLHIEEKRAINRLMNRAASSSLSDVNL--VFFVVEGT--HWTADDEMV------LNKLK 132
Query: 255 PPKQKRVLCMNKVDLVTKKKDLL 277
VLC+NKVD V + D++
Sbjct: 133 NANFPVVLCVNKVDNVKDRNDVM 155
>gi|379795926|ref|YP_005325924.1| GTP-binding protein Era [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356872916|emb|CCE59255.1| GTP-binding protein Era homolog [Staphylococcus aureus subsp.
aureus MSHR1132]
Length = 299
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 91/175 (52%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFMNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D ++V A + ++ + +M + + + + D ++ +++ +
Sbjct: 63 G--IHKPKHKLGDYMMKV--AKNTLSEIDAIMFMVNANEDIGRGDEYIMEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV +L+ EQ++ + I S L+G + L
Sbjct: 114 -KTPVFLVLNKIDLV-HPDELMPKIEQYQTYMNFTEIVPISALEGLNVDHFIDVL 166
>gi|424787821|ref|ZP_18214585.1| GTP-binding protein Era [Streptococcus intermedius BA1]
gi|422113575|gb|EKU17313.1| GTP-binding protein Era [Streptococcus intermedius BA1]
Length = 299
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 89/179 (49%), Gaps = 11/179 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+ +NY++G K+A +S K TT ++++G+ T QI DTPG+
Sbjct: 4 KSGFVAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTDTEQIVFIDTPGI 63
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ VESA+S + E ++ + D + +ER+ P
Sbjct: 64 HKPKTALGD----FMVESAYSTLREVETVLFMVPADEKRGKGDDMI---MERLKAAKIP- 115
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
+L +NK+D V + LL+ + F+ ++ I S L+G + L + L E ++
Sbjct: 116 --VILVINKIDKVHPDQ-LLEQIDDFRTQMEFKEIVPISALQGNNVSRLIELLTENLEE 171
>gi|284047992|ref|YP_003398331.1| GTP-binding protein Era [Acidaminococcus fermentans DSM 20731]
gi|283952213|gb|ADB47016.1| GTP-binding protein Era [Acidaminococcus fermentans DSM 20731]
Length = 308
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 93/184 (50%), Gaps = 13/184 (7%)
Query: 130 EEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQI 189
EE + S V ++G PNAGKS+++N++VG KVA +S + TT + +L +++ + Q+
Sbjct: 2 EEKNTQQHHSGFVAVVGRPNAGKSTLVNHLVGEKVAIISDRPQTTRNRILSILSTEEAQM 61
Query: 190 CIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIER 249
DTPGL + V++A +A+ +V++ V D + + +ER
Sbjct: 62 VFLDTPGLHKPQDKLGEH----MVQAALNAIKEVDVVLFVVDASEKRGKGEQVI---LER 114
Query: 250 MGKQ--APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALT 307
+ ++ AP +L +NK+D + K LL + ++F+ + + S L+ L
Sbjct: 115 LKEECHAPV----ILVLNKIDRLPDKAVLLPIIDKFRKEYPFRSVLTLSALEDEDFSPLL 170
Query: 308 QYLM 311
Q ++
Sbjct: 171 QEIV 174
>gi|260432757|ref|ZP_05786728.1| GTP-binding protein Era [Silicibacter lacuscaerulensis ITI-1157]
gi|260416585|gb|EEX09844.1| GTP-binding protein Era [Silicibacter lacuscaerulensis ITI-1157]
Length = 302
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 87/173 (50%), Gaps = 9/173 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ +IG PNAGKS+++N MVG KV+ V+ K TT + GV + D Q+ DTPGL +
Sbjct: 8 IALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGDAQLVFVDTPGLFKPR 67
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW ++++++ + HR +T R++ + + + +K
Sbjct: 68 RRLD----RAMVAAAWGGAADADIIVLMVEAHRGITEGVERILDGLSEIAQ----GRKVA 119
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NK+D V + LL + + FM S G G++ L ++L +Q
Sbjct: 120 LAINKIDRV-EAPALLSLTRDLNDRFPFAETFMISAETGHGVEDLRKWLAQQL 171
>gi|407799644|ref|ZP_11146522.1| GTP-binding protein Era [Oceaniovalibus guishaninsula JLT2003]
gi|407058121|gb|EKE44079.1| GTP-binding protein Era [Oceaniovalibus guishaninsula JLT2003]
Length = 302
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N MVG KV+ V+ K TT + GV + +QI DTPGL +
Sbjct: 9 VALIGEPNAGKSTLLNRMVGAKVSIVTHKVQTTRARIRGVAMEGQSQIVFVDTPGLFAPR 68
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW+ ++++++ + HR LT ++ + +AP V
Sbjct: 69 RRLD----RAMVAAAWAGAGDADIVVLLVEAHRGLTDGVVAILDTLRDRDLKAPV----V 120
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V + LL + ++ + R F+ S KG G+ L +L
Sbjct: 121 LAINKIDRV-EAPVLLGLTQKLNDSFAFARTFLISAEKGYGVDDLRDWL 168
>gi|398820090|ref|ZP_10578628.1| ribosome-associated GTPase EngA [Bradyrhizobium sp. YR681]
gi|398229221|gb|EJN15305.1| ribosome-associated GTPase EngA [Bradyrhizobium sp. YR681]
Length = 460
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 89/191 (46%), Gaps = 20/191 (10%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
+E + + V I+G PNAGKS++IN+++G + S + TT + + Q +F
Sbjct: 181 EEAATRPIRVAIVGRPNAGKSTMINHLLGEERLLTSPEAGTTRDSIAVEINWKGRQFRVF 240
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGK 252
DT GL +S K K+ V A AV EV++++ D D R+ LIER G+
Sbjct: 241 DTAGLR-RRSRIEEKLEKLSVADALRAVRFAEVVVMMMDAQNRFEEQDLRIADLIEREGR 299
Query: 253 QAPPKQKRVLCMNKVDLVTKK---------KDLLKVAEQFKHLPGYERIFMTSGLKGAGL 303
VL +NK DL+ K +D + Q K +P I SGL G G+
Sbjct: 300 AV------VLAVNKWDLMESKGGGAISNLRRDADHLLPQVKGVP----IVAVSGLMGEGI 349
Query: 304 KALTQYLMEQF 314
L Q + + +
Sbjct: 350 DRLMQAIQDAY 360
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 139 SVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLM 198
S + IIG PN GKS++ N +VG K+A V T G D + I DT GL
Sbjct: 2 SFTIAIIGRPNVGKSTLFNRLVGQKLALVDDLPGVTRDRREGEARLGDLEFTIIDTAGLD 61
Query: 199 LNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPD 240
G ++ + E+A + + L V D LT D
Sbjct: 62 EGAKGSLTARMQEQTEAAIAQAD---ALFFVVDARIGLTPTD 100
>gi|398817961|ref|ZP_10576560.1| GTP-binding protein Era [Brevibacillus sp. BC25]
gi|398028759|gb|EJL22262.1| GTP-binding protein Era [Brevibacillus sp. BC25]
Length = 305
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 95/179 (53%), Gaps = 11/179 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N++VG K+A +S K TT +++ V T + QI DTPG+
Sbjct: 11 KSGFVSIVGRPNVGKSTLLNHIVGHKIAIMSNKPQTTRNKITAVHTTEEGQIIFLDTPGI 70
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+S + V V A + +N ++++ V D + D + IER+ + P
Sbjct: 71 HKPQSKLGNYMVSV----AENTLNEVDLVLFVVDATEKRGAGDDYI---IERLKQVKTPV 123
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
L +NK+D V + LL + + ++ L +++I S L+G +L Q ++ + ++
Sbjct: 124 ---FLVINKIDKVHPEA-LLPIIDDYRKLYDFKQIVPISALEGNNTGSLQQAILGEMEE 178
>gi|434397103|ref|YP_007131107.1| GTP-binding protein Era-like-protein [Stanieria cyanosphaera PCC
7437]
gi|428268200|gb|AFZ34141.1| GTP-binding protein Era-like-protein [Stanieria cyanosphaera PCC
7437]
Length = 309
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 78/146 (53%), Gaps = 10/146 (6%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
+ E KS +GIIG PN GKS+++N +VG K+A S TT + + G++T ++ QI
Sbjct: 10 IAPEGFKSGFIGIIGRPNVGKSTLMNKLVGQKIAITSPVAQTTRNRLRGILTTSEAQIIF 69
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMG 251
DTPG+ H+ K+ V++A +A+N ++++ V D D +++L++
Sbjct: 70 VDTPGI----HKPHHELGKILVQNAQAAINTVDLILFVVDSSMPAGGGDKFIVQLLQNTS 125
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLL 277
++ +NK+DL T L+
Sbjct: 126 LPV------IVGLNKIDLPTDDSQLI 145
>gi|385817770|ref|YP_005854160.1| GTPase Era [Lactobacillus amylovorus GRL1118]
gi|327183708|gb|AEA32155.1| GTPase Era [Lactobacillus amylovorus GRL1118]
Length = 301
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 18/186 (9%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
++E+ KS V ++G PN GKS+++NY+VG KVA S K TT + + G+ T D QI
Sbjct: 1 MEEKKFKSGFVALVGRPNVGKSTLMNYLVGQKVAITSNKPQTTRNRISGIYTSDDMQIVF 60
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERM 250
DTPG+ H + ++ A S +L +V +V+F V + D + L++ +
Sbjct: 61 VDTPGIF-----KPHSKLDDYMDKA-SLSSLNDVDLVLFMVEPEKIGKGDQYIADLLKEV 114
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKAL 306
K L +NKVD + K LL + + + L ++ I S +G G L L
Sbjct: 115 ------KVPVFLVINKVDQIHPNK-LLPIMDSYHKLESFKEILPISATQGIGIEDLLATL 167
Query: 307 TQYLME 312
+YL E
Sbjct: 168 NKYLPE 173
>gi|51473231|ref|YP_066988.1| GTP-binding protein Era [Rickettsia typhi str. Wilmington]
gi|383752005|ref|YP_005427105.1| GTPase Era [Rickettsia typhi str. TH1527]
gi|383842840|ref|YP_005423343.1| GTPase Era [Rickettsia typhi str. B9991CWPP]
gi|81390309|sp|Q68XY6.1|ERA_RICTY RecName: Full=GTPase Era
gi|51459543|gb|AAU03506.1| Era-like GTP-binding protein [Rickettsia typhi str. Wilmington]
gi|380758648|gb|AFE53883.1| GTPase Era [Rickettsia typhi str. TH1527]
gi|380759487|gb|AFE54721.1| GTPase Era [Rickettsia typhi str. B9991CWPP]
Length = 295
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 91/174 (52%), Gaps = 12/174 (6%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QK+++V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQI ++DTPG
Sbjct: 6 QKTISVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQIILYDTPG 65
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ K K V AWS++ ++++ + D + L ++ + P
Sbjct: 66 IFEPKGMLE----KAMVRCAWSSLYSADLVLSIIDSLKPLDDMAHNILNQFCLLN-IVP- 119
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ +NK+D+ +K + +K + H P +F S L G + L +Y+
Sbjct: 120 ----IFLLNKIDIESKYLNDIKAFLKISH-PK-SLLFPISALCGKNVDVLLKYI 167
>gi|254230525|ref|ZP_04923896.1| GTP-binding protein Era [Vibrio sp. Ex25]
gi|262393271|ref|YP_003285125.1| GTP-binding protein Era [Vibrio sp. Ex25]
gi|151936950|gb|EDN55837.1| GTP-binding protein Era [Vibrio sp. Ex25]
gi|262336865|gb|ACY50660.1| GTP-binding protein Era [Vibrio sp. Ex25]
Length = 320
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 14/178 (7%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+Q + I+G PN GKS+++N ++G K++ SRK TT H ++GV T D Q DT
Sbjct: 22 ENQHCGFIAIVGRPNVGKSTLLNKILGQKISITSRKPQTTRHRIMGVDTDGDYQAIYVDT 81
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQ 253
PGL + + ++ + S+ S VNL V F V H T D V + ++ K
Sbjct: 82 PGLHIEEKRAINRLMNRAANSSLSDVNL-----VFFLVDGTHWTKDDEMV---LTKLQKS 133
Query: 254 APPKQKRVLCMNKVDLVTKKKD-LLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P VLC+NKVD V + + +L +AE K + + + S +G + L +++
Sbjct: 134 NFPV---VLCVNKVDNVQDRNEVMLHMAEMSKKMD-FVDVVPISAKQGKNIDVLRKHV 187
>gi|71907658|ref|YP_285245.1| GTP-binding protein Era [Dechloromonas aromatica RCB]
gi|71847279|gb|AAZ46775.1| Small GTP-binding protein domain:GTP-binding:GTP-binding protein
Era [Dechloromonas aromatica RCB]
Length = 294
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 11/163 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S + I+G PN GKS+++N +VG K++ VSRK TT H + G++T D Q DTPG
Sbjct: 5 RSGYIAIVGRPNVGKSTLLNRLVGEKISIVSRKAQTTRHRITGILTNDDAQFVFVDTPGF 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
++ +S+ + +N +V++ + + R+ + D V+RL+ P
Sbjct: 65 ---QTKFSNALNRAMNRGVTQTLNDVDVVLFLIEAGRY-DAKDKAVVRLL-------PKD 113
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKG 300
+ +L +NK D + + L + Y + S KG
Sbjct: 114 RPVILVVNKTDQIKDRSSLFPFLAEVSADHDYAAVVPISAAKG 156
>gi|366085898|ref|ZP_09452383.1| GTPase Era [Lactobacillus zeae KCTC 3804]
Length = 300
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 17/172 (9%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V IIG PN GKS+ +N ++G K+A +S K TT +++ G+ T D QI DTPG+ K
Sbjct: 9 VAIIGRPNVGKSTFMNRILGEKIAIMSPKAQTTRNKINGIYTTPDAQIVFVDTPGIHKPK 68
Query: 202 S---GYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQ 258
+ Y K +A S +N + ++ + + D+ ++R + A K+
Sbjct: 69 NELDDYMDK-------AALSTLNQVDAILFMVAADEQKGAGDAYIMR------QLAEVKK 115
Query: 259 KRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+DLV K DLL + E ++H + ++F S G + L L
Sbjct: 116 PVYLILNKIDLV-KPDDLLPLIESYQHDYDFAQVFPISATMGNNVDDLLTSL 166
>gi|339497569|ref|ZP_08658545.1| GTPase [Leuconostoc pseudomesenteroides KCTC 3652]
Length = 303
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 91/170 (53%), Gaps = 11/170 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V IIG PN GKS+++N +VG K+A +S K TT +++ G+ T + Q+ DTPG
Sbjct: 7 KSGFVAIIGRPNVGKSTLLNRIVGEKIAIMSDKAQTTRNKIQGIYTTDNAQVVFIDTPG- 65
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
++K S D V+ SA+SA++ + + V D D +I ++ + K P
Sbjct: 66 -VHKPQNSLGDFMVK--SAFSALHEADAIWFVADASMPRGRGDDFIIERLKEV-KNTP-- 119
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFK-HLPGYERIFMTSGLKGAGLKAL 306
L +NK+DL++ KDLL V ++ + P + +F S +G + L
Sbjct: 120 --IYLLINKIDLLS-PKDLLNVIASYQENAPEWTEVFPISATEGDNVPEL 166
>gi|427783723|gb|JAA57313.1| Putative ras-like gtpase era [Rhipicephalus pulchellus]
Length = 411
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 23/195 (11%)
Query: 110 HRALAKALLQAALERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSR 169
HR + + LL+ + R + + K + V IIG PN GKS+++N ++ KV AVS
Sbjct: 37 HRTVPRTLLEYSHLRSAVPTQP---SNPKLLRVAIIGQPNVGKSTLVNQLMRWKVCAVSS 93
Query: 170 KTNTTTHEVLGVMTKADTQICIFDTPGLM-LNKSGYSHKDVKVRVESAWSAVNLFEVLMV 228
K +TT H + +TQ+ I DTPG++ LN H + + V+ + +N +++ V
Sbjct: 94 KVHTTRHNARAIFVNGETQVVILDTPGIVDLNHGRKHHLEASMIVDPEHALLNA-DLVAV 152
Query: 229 VFDVHRHLT--SPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHL 286
+ D H + D +RL+E + VL +NKVDL+ K+ +L +F H
Sbjct: 153 MVDASDHWRRHTLDEETLRLLEYNAQLTS-----VLIVNKVDLLRSKRQIL----EFTH- 202
Query: 287 PGYERIFMTSGLKGA 301
+T G+ G
Sbjct: 203 ------SLTGGVVGG 211
>gi|228478255|ref|ZP_04062863.1| GTP-binding protein Era [Streptococcus salivarius SK126]
gi|418018215|ref|ZP_12657771.1| GTPase Era [Streptococcus salivarius M18]
gi|228249934|gb|EEK09204.1| GTP-binding protein Era [Streptococcus salivarius SK126]
gi|345527064|gb|EGX30375.1| GTPase Era [Streptococcus salivarius M18]
Length = 299
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 11/179 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V IIG PN GKS+ +N+++G K+A +S K TT ++++G+ T QI DTPG+
Sbjct: 4 KSGFVAIIGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ VESA+S + + ++ + D+ + IER+ KQA K
Sbjct: 64 HKPKTALG----DFMVESAYSTLREVDTVLFMVPADEPRGKGDNMI---IERL-KQA--K 113
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
+L +NK+D V + LL+ E F+ ++ I S L+G + L L + ++
Sbjct: 114 VPVILVINKIDKVHPDQ-LLEQIEDFRTQMDFKEIIPISALQGNNVSHLVDVLSDNLEE 171
>gi|205374162|ref|ZP_03226962.1| GTP-binding protein Era [Bacillus coahuilensis m4-4]
Length = 306
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 91/173 (52%), Gaps = 11/173 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V IIG PN GKS+ +N ++G K+A +S K TT ++V GV+T AD+QI DTPG
Sbjct: 11 KSGFVSIIGRPNVGKSTFLNRVIGQKIAIMSDKPQTTRNKVQGVLTLADSQIVFIDTPG- 69
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
++K + D ++V A + + ++++ + DV + D + IE++ + P
Sbjct: 70 -IHKPKHKLGDFMMKV--AQNTLKEVDIVLFMVDVAEGIGKGDEFI---IEKLKNVSTP- 122
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D + +L + E+++ + I S L+G + L L
Sbjct: 123 --VFLVLNKIDAI-HPDELFSIIEEYRSRFEFTEIVPISALEGNNVDTLLDQL 172
>gi|449951164|ref|ZP_21808545.1| GTP-binding protein Era [Streptococcus mutans 11SSST2]
gi|449166521|gb|EMB69455.1| GTP-binding protein Era [Streptococcus mutans 11SSST2]
Length = 299
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 91/179 (50%), Gaps = 11/179 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+ +N+++G K+A +S K TT ++++G+ T QI DTPG+
Sbjct: 4 KSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTDKEQIVFIDTPGI 63
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ VESA+S + + ++ + D+ + IER+ P
Sbjct: 64 HKPKTALG----DFMVESAYSTLREVDTVLFIVPADEKRGKGDNMI---IERLKAAKVP- 115
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
+L +NK+D V + LL+ + F++ ++ I S L+G + L L++ ++
Sbjct: 116 --VILVINKIDKVHPDQ-LLEQIDDFRNQMDFQEIVPISALQGNNVSHLVDLLVDHLEE 171
>gi|163802959|ref|ZP_02196846.1| GTP-binding protein Era [Vibrio sp. AND4]
gi|159173249|gb|EDP58077.1| GTP-binding protein Era [Vibrio sp. AND4]
Length = 320
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 90/181 (49%), Gaps = 12/181 (6%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+Q + I+G PN GKS+++N ++G K++ SRK TT H ++GV T D Q DT
Sbjct: 22 ENQHCGFIAIVGRPNVGKSTLLNKILGQKISITSRKPQTTRHRIMGVDTDGDYQAIYVDT 81
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQ 253
PGL + + ++ + S+ S VNL V F V H T+ D V + ++ K
Sbjct: 82 PGLHIEEKRAINRLMNRAANSSLSDVNL-----VFFLVDGTHWTNDDEMV---LTKLQKS 133
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
P VLC+NKVD V + ++++ + + + S G ++ L +++ +
Sbjct: 134 NFPV---VLCVNKVDNVQDRNEVMQHMMEMSKRMDFVDVVPISAKHGKNIEVLRKHVRDH 190
Query: 314 F 314
Sbjct: 191 L 191
>gi|451972097|ref|ZP_21925309.1| GTP-binding protein Era [Vibrio alginolyticus E0666]
gi|451931935|gb|EMD79617.1| GTP-binding protein Era [Vibrio alginolyticus E0666]
Length = 320
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 14/178 (7%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+Q + I+G PN GKS+++N ++G K++ SRK TT H ++GV T D Q DT
Sbjct: 22 ENQHCGFIAIVGRPNVGKSTLLNKILGQKISITSRKPQTTRHRIMGVDTDGDYQAIYVDT 81
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQ 253
PGL + + ++ + S+ S VNL V F V H T D V + ++ K
Sbjct: 82 PGLHIEEKRAINRLMNRAANSSLSDVNL-----VFFLVDGTHWTKDDEMV---LTKLQKS 133
Query: 254 APPKQKRVLCMNKVDLVTKKKD-LLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
P VLC+NKVD V + + +L +AE K + + + S +G + L +++
Sbjct: 134 NFPV---VLCVNKVDNVQDRNEVMLHMAEMSKKMD-FVDVVPISAKQGKNIDVLRKHV 187
>gi|431931183|ref|YP_007244229.1| GTP-binding protein Era [Thioflavicoccus mobilis 8321]
gi|431829486|gb|AGA90599.1| GTP-binding protein Era [Thioflavicoccus mobilis 8321]
Length = 298
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 10/175 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ IIG PN GKS+++N VG K+A S K TT H +LG+ T+ D Q+ DTPG+
Sbjct: 9 IAIIGRPNVGKSTLLNGFVGQKLAITSSKAQTTRHTILGIKTRPDGQLVFVDTPGIHRRG 68
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+G ++ + +A + + ++++ V + R T D + ++ I G A +
Sbjct: 69 AGALNRYLN---RAALTTIGDVDLVLFVVEAGR-WTQEDDKALQAIAEAGTPA------I 118
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFKD 316
+NK+D + K LL EQ + + S +G ++ L +++ +
Sbjct: 119 AVVNKIDRLRDKTPLLPYLEQLARRHEFLELVPVSAARGDQVERLETLVLQTLPE 173
>gi|262373077|ref|ZP_06066356.1| GTP-binding protein Era [Acinetobacter junii SH205]
gi|262313102|gb|EEY94187.1| GTP-binding protein Era [Acinetobacter junii SH205]
Length = 341
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 10/171 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D KS V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ +Q DTP
Sbjct: 35 DFKSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTP 94
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL VL VV D + T D V +E++
Sbjct: 95 GMHKKEVRAINKMMNRAAHSALRDVNL--VLFVV-DAQK-WTQNDELV---LEKLKNAEM 147
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
P +L +NK+D K + L + + L + I S L+GA L+ L
Sbjct: 148 PV---ILVINKLDTFENKNEALPLIRERAKLMDFAEIVPVSALRGANLEHL 195
>gi|91789484|ref|YP_550436.1| GTP-binding protein Era [Polaromonas sp. JS666]
gi|91698709|gb|ABE45538.1| GTP-binding protein Era [Polaromonas sp. JS666]
Length = 314
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 13/143 (9%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E Q+ + I+G PN GKS+++N +VG K++ SRK TT H + GV T TQ DT
Sbjct: 22 ETQRCGLIAIVGKPNVGKSTLLNALVGQKISITSRKAQTTRHRITGVRTVGATQFVFVDT 81
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHR-HLTSPDSRVIRLIERMGKQ 253
PG ++ + V A + V+L +VF V D++V+ L+
Sbjct: 82 PGFQTRHGNALNRSLNRTVVGAVNDVDL-----IVFVVEAGQFNLADAKVLALL------ 130
Query: 254 APPKQKRVLCMNKVDLVTKKKDL 276
P K +L NK DL+ ++ +L
Sbjct: 131 -PAKTPAILLANKFDLIYRRAEL 152
>gi|383772450|ref|YP_005451516.1| GTP-binding protein EngA [Bradyrhizobium sp. S23321]
gi|381360574|dbj|BAL77404.1| GTP-binding protein EngA [Bradyrhizobium sp. S23321]
Length = 460
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 123 ERQEEEEEEVKEEDQ--KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLG 180
E + E++ + EE+ + + V I+G PNAGKS+ IN+++G + S + TT +
Sbjct: 169 EDEAEDDAPLTEEEAATRPIRVAIVGRPNAGKSTFINHLLGEERLLTSPEAGTTRDSIAV 228
Query: 181 VMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPD 240
+ + +FDT GL +S K K+ V A AV EV++++ D D
Sbjct: 229 EINWKGREFRVFDTAGLR-RRSRIEEKLEKLSVADALRAVRFAEVVVMMMDAQNRFEEQD 287
Query: 241 SRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKK---------KDLLKVAEQFKHLPGYER 291
R+ LIER G+ VL +NK DL+ K +D + Q K +P
Sbjct: 288 LRIADLIEREGRAV------VLAVNKWDLMESKGGGAISNLRRDADHLLPQVKGVP---- 337
Query: 292 IFMTSGLKGAGLKALTQYLMEQF 314
I SGL G G+ L Q + + +
Sbjct: 338 IVAVSGLMGEGIDRLMQAIQDAY 360
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 139 SVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLM 198
S + IIG PN GKS++ N +VG K+A V T G D + I DT GL
Sbjct: 2 SFTIAIIGRPNVGKSTLFNRLVGQKLALVDDLPGVTRDRREGEARLGDLEFTIIDTAGLD 61
Query: 199 LNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPD 240
G ++ + E+A + + L V D LT D
Sbjct: 62 EGAKGSLTARMQEQTEAAIAQAD---ALFFVIDARIGLTPTD 100
>gi|332525372|ref|ZP_08401535.1| putative GTP-binding protein [Rubrivivax benzoatilyticus JA2]
gi|332108644|gb|EGJ09868.1| putative GTP-binding protein [Rubrivivax benzoatilyticus JA2]
Length = 329
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 77/149 (51%), Gaps = 19/149 (12%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E Q+ + I+G PN GKS+++N +VG K++ SRK TT H + G+ T TQ DT
Sbjct: 33 EGQRCGLIAIVGRPNVGKSTLLNALVGQKISITSRKAQTTRHRITGIRTVGATQFVFVDT 92
Query: 195 PGL----MLNKSGYSHKDVKVRVESAWSAVN--LFEVLMVVFDVHRHLTSPDSRVIRLIE 248
PG + SG +K + V ++ + V+ LF V F + D++V+ L+
Sbjct: 93 PGFQTTHLKRHSGAMNKTLNRTVTASVADVDAVLFMVEAGRFGLD------DAKVLALL- 145
Query: 249 RMGKQAPPKQKRVLCMNKVDLVTKKKDLL 277
PP + +L NK+D V ++ D+L
Sbjct: 146 ------PPDKPVILVANKLDAVRRRTDIL 168
>gi|297568834|ref|YP_003690178.1| ribosome-associated GTPase EngA [Desulfurivibrio alkaliphilus AHT2]
gi|296924749|gb|ADH85559.1| ribosome-associated GTPase EngA [Desulfurivibrio alkaliphilus AHT2]
Length = 487
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 95/194 (48%), Gaps = 15/194 (7%)
Query: 118 LQAALERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHE 177
+ A L +E EEV ED +V V IG PN GKSS+IN ++G + VS TT
Sbjct: 207 VAAELPPAQEPGEEVSAED--TVGVAFIGRPNVGKSSLINRLLGEERMVVSNLPGTTRDS 264
Query: 178 VLGVMTKADTQICIFDTPGLMLNKSGYSHKDV-KVRVESAWSAVNLFEVLMVVFDVHRHL 236
V ++T+AD + + DT G + + G H+ V K V A + ++ ++V D +
Sbjct: 265 VDTLLTRADKKYLLIDTAG--IRRKGKVHEKVEKFSVLRALRTLERCDLALIVIDALEGV 322
Query: 237 TSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLV----TKKKDLLKVAEQFKHLPGYERI 292
T D++V+ G+ ++ +NK DL+ +++ LL+ ++ H GY +
Sbjct: 323 TEQDTKVLGYGLERGRAC------LVLLNKWDLIEHDRKQQQRLLEDVKRAVHFAGYAPV 376
Query: 293 FMTSGLKGAGLKAL 306
S L G GL L
Sbjct: 377 HRVSALTGHGLGKL 390
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 13/165 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++G PN GKSS+ N + G++ A V T +T D + + DT GL +
Sbjct: 52 VALVGRPNVGKSSLFNRLAGSRKAIVDPTPGVTRDRHYEKITWNDRRFILVDTGGLESDT 111
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ ++ ++ E AV +V++ + D + D V+ ++ R GK K
Sbjct: 112 TTEINRLIQ---EQTSQAVAEADVVLFLLDGREGILPDDQEVVEILRRSGK------KVF 162
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
+NK+D + LL F L G E ++ S G G+ L
Sbjct: 163 YLINKIDAPEQAAKLLPT---FYEL-GVEELWPVSAEHGQGIGDL 203
>gi|289550662|ref|YP_003471566.1| GTP-binding protein Era [Staphylococcus lugdunensis HKU09-01]
gi|315658157|ref|ZP_07911029.1| GTP-binding protein Era [Staphylococcus lugdunensis M23590]
gi|385784288|ref|YP_005760461.1| putative GTP-binding protein [Staphylococcus lugdunensis N920143]
gi|418413964|ref|ZP_12987180.1| GTPase Era [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|418635809|ref|ZP_13198168.1| GTP-binding protein Era [Staphylococcus lugdunensis VCU139]
gi|289180194|gb|ADC87439.1| GTP-binding protein Era [Staphylococcus lugdunensis HKU09-01]
gi|315496486|gb|EFU84809.1| GTP-binding protein Era [Staphylococcus lugdunensis M23590]
gi|339894544|emb|CCB53826.1| putative GTP-binding protein [Staphylococcus lugdunensis N920143]
gi|374841497|gb|EHS04969.1| GTP-binding protein Era [Staphylococcus lugdunensis VCU139]
gi|410877602|gb|EKS25494.1| GTPase Era [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 299
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 11/174 (6%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTPG
Sbjct: 4 HKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTPG 63
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
++K + D +RV A + ++ + +M + +V+ + D ++ ++ +
Sbjct: 64 --IHKPKHKLGDYMMRV--AKNTLSEIDAIMFMVNVNEDIGRGDEYIMDMLRNV------ 113
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV L+ E ++ + I S L+G + L
Sbjct: 114 KTPVFLVLNKIDLV-HPDSLMPRIEAYQKYMNFTEIVPISALEGLNVDHFIDVL 166
>gi|212212137|ref|YP_002303073.1| GTP-binding protein Era [Coxiella burnetii CbuG_Q212]
gi|226741203|sp|B6IZ00.1|ERA_COXB2 RecName: Full=GTPase Era
gi|212010547|gb|ACJ17928.1| GTP-binding protein era [Coxiella burnetii CbuG_Q212]
Length = 295
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 143 GIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKS 202
IIG PN GKS+++N ++G K++ SRK TT +++LGV T D Q+ DTPGL +
Sbjct: 10 AIIGRPNVGKSTLLNQLLGQKISITSRKPQTTRYQILGVKTFKDIQVIYVDTPGLHASTE 69
Query: 203 GYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVL 262
++ + A L +V +VF + H S D+ V+ ++ + + P L
Sbjct: 70 RTINRYMNRTARGA-----LRDVDAIVFVIEPHWESQDAWVLDNLKEI--ETPV----FL 118
Query: 263 CMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
+NKVD + + +LL + E+ L +++I S G + L Q
Sbjct: 119 VINKVDKIKNRAELLPLIEKVSSLYAFQKITPLSAKTGDQVGTLEQ 164
>gi|398833762|ref|ZP_10591885.1| GTP-binding protein Era [Herbaspirillum sp. YR522]
gi|398220976|gb|EJN07407.1| GTP-binding protein Era [Herbaspirillum sp. YR522]
Length = 308
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 13/149 (8%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
+D + + IIG PN GKS+++N +VG KV+ SRK TT H + G+ T +TQ DT
Sbjct: 16 DDYRCGYIAIIGRPNVGKSTLMNALVGAKVSITSRKAQTTRHRITGIQTLDNTQFVYIDT 75
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSP-DSRVIRLIERMGKQ 253
PG S +K + V S +A ++ ++F + P D V+ L+
Sbjct: 76 PGFQTRHSNALNKTLNRTVTSTLTAADV-----ILFVIEAGTFGPADQLVLDLV------ 124
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQ 282
PP +L +NK D K L+ A++
Sbjct: 125 -PPSVPCILVLNKSDRSKDKAALMPFAQE 152
>gi|392412079|ref|YP_006448686.1| GTP-binding protein Era [Desulfomonile tiedjei DSM 6799]
gi|390625215|gb|AFM26422.1| GTP-binding protein Era [Desulfomonile tiedjei DSM 6799]
Length = 299
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V + G PN GKS+++N ++G +++ V+ K TT + + + T + Q+ + DTPG+
Sbjct: 10 RSGIVALAGRPNVGKSTLVNTILGRELSIVTPKAQTTRNRITAIHTMPEAQLVLHDTPGI 69
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ + V + ++ A + + + ++HR D +++ +I GK P
Sbjct: 70 HDPKTPLNRALVAIAAKTLEDADIILLITEPLEEIHRE----DLQIVDMI---GKTRTPA 122
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
VL +NK+D V K + LL V E F L +E I S L G G+ L L+
Sbjct: 123 ---VLALNKIDTV-KPQALLPVIENFNRLERFEEIVPISALHGDGVTELVNILIRML 175
>gi|313205716|ref|YP_004044893.1| GTP-binding protein era [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|383485032|ref|YP_005393944.1| GTP-binding protein era [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|386322300|ref|YP_006018462.1| GTPase [Riemerella anatipestifer RA-GD]
gi|416111288|ref|ZP_11592545.1| GTP-binding protein Era [Riemerella anatipestifer RA-YM]
gi|442315109|ref|YP_007356412.1| GTPase [Riemerella anatipestifer RA-CH-2]
gi|312445032|gb|ADQ81387.1| GTP-binding protein Era [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|315022889|gb|EFT35913.1| GTP-binding protein Era [Riemerella anatipestifer RA-YM]
gi|325336843|gb|ADZ13117.1| GTPase [Riemerella anatipestifer RA-GD]
gi|380459717|gb|AFD55401.1| GTP-binding protein era [Riemerella anatipestifer ATCC 11845 = DSM
15868]
gi|441484032|gb|AGC40718.1| GTPase [Riemerella anatipestifer RA-CH-2]
Length = 291
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
K+ V I+G PNAGKS+++N ++G K+A V++K TT H + G+ + D QI DTPG
Sbjct: 2 HKAGFVNIVGKPNAGKSTLLNQLMGEKLAIVTKKAQTTRHRIFGIYNEPDLQIVFSDTPG 61
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
++ K G K + +S A +V + + DV T D+ LIE++ K P
Sbjct: 62 VLDPKYGLQEKMMDFVKDSLQDA----DVFLFIVDV----TDKDAPSEFLIEKLNKIPVP 113
Query: 257 KQKRVLCMNKVD 268
++ +NK+D
Sbjct: 114 ---VLILINKID 122
>gi|301511106|ref|ZP_07236343.1| GTP-binding protein Era [Acinetobacter baumannii AB058]
Length = 297
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 87/165 (52%), Gaps = 10/165 (6%)
Query: 146 GAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYS 205
G PN GKS+++N+++G K++ SRK TT H+++G+ ++ Q DTPG+ +
Sbjct: 1 GRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTPGMHKKEVRAI 60
Query: 206 HKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMN 265
+K + SA VNL ++ V D H+ + D ++E++ P +L +N
Sbjct: 61 NKMMNRAAHSALRDVNL---VLFVIDAHKWTQNDD----LVLEKLKNADMPV---ILVIN 110
Query: 266 KVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K D K+++L + ++ L + I S L+GA L+ L++ +
Sbjct: 111 KADTFGDKREILPLIQERAKLMNFAEIVPVSALRGANLEHLSETI 155
>gi|326797796|ref|YP_004315615.1| GTP-binding protein Era [Sphingobacterium sp. 21]
gi|326548560|gb|ADZ76945.1| GTP-binding protein Era-like-protein [Sphingobacterium sp. 21]
Length = 292
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 95/178 (53%), Gaps = 13/178 (7%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
K+ V I+G PNAGKS+++N +VG K++ V+ K TT H +LG++ + D QI DTPG
Sbjct: 3 HKAGFVSIVGKPNAGKSTLMNSLVGEKMSIVTPKAQTTRHRILGIVNEEDYQIVFSDTPG 62
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
++ K YS ++ + S V+ ++++ V D++ D +IE++ K P
Sbjct: 63 VI--KPAYSLQESMMNFVHG-SLVDA-DIILFVTDINEKYDETD-----VIEKLQKTDSP 113
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
V+ +NK+D + + D+ ++ IF S L G ++A+ Q+++E
Sbjct: 114 ---VVVLVNKIDK-SNEDDVKAKINYWQETLDPTAIFAISALLGHNIQAVFQFVLEHL 167
>gi|410447378|ref|ZP_11301474.1| GTP-binding protein Era [SAR86 cluster bacterium SAR86E]
gi|409979653|gb|EKO36411.1| GTP-binding protein Era [SAR86 cluster bacterium SAR86E]
Length = 302
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 87/171 (50%), Gaps = 14/171 (8%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++N ++ KV+ SRK+ TT + +LGV T+ D Q+ DTPG+ +N
Sbjct: 9 ISIVGKPNVGKSTLLNVILDKKVSITSRKSQTTRNNILGVKTEGDFQMVFLDTPGIHINA 68
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRH-LTSPDSRVIRLIERMGKQAPPKQKR 260
+ + KV SA S + + +V+F V R L D +VI I+ R
Sbjct: 69 TKTMN---KVLNHSATSVIE--DSDLVLFLVQRTALQEQDLQVINKIKE-------SNVR 116
Query: 261 VLC-MNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+C +NKVD V K LL + ++ + ++ S L G+ L +
Sbjct: 117 SICVLNKVDQVENKNQLLPLIQKINDIYPFDHYIPISALNNEGIDELINLV 167
>gi|426237220|ref|XP_004012559.1| PREDICTED: GTPase Era, mitochondrial [Ovis aries]
Length = 437
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 53/234 (22%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ + + V ++GAPNAGKS++ N ++G KV VSRK +TT + LGV+T+ +TQ+ + DT
Sbjct: 109 ENPRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVHTTRSQALGVITEKETQVILLDT 168
Query: 195 PGLMLNKSGYSHKDVKVRVESAW----SAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM 250
PGL+ H +E W SA + ++ V R+ SP ++++ + +
Sbjct: 169 PGLISRAKQKRHHLELSLLEDPWKSMESADLVVVLVDVSDKWTRNQLSP--QLLQCLTQF 226
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDL----------------LKVAEQFKHLPG------ 288
Q P +L MNKVD + +K L LK + + PG
Sbjct: 227 -SQVP----SILVMNKVDCLKQKSVLLELTAALTEGVVNGKKLKTRQALRSQPGTHCPSP 281
Query: 289 --------------------YERIFMTSGLKGAGLKALTQYLMEQFKDLGLKIH 322
++ IFM S L +K L QYL+ Q + + H
Sbjct: 282 AAQGPNPQPVRDPQQMGWPHFQEIFMLSALSQEDVKTLKQYLLAQARPGPWEFH 335
>gi|385813664|ref|YP_005850057.1| GTP-binding protein era-like protein [Lactobacillus helveticus H10]
gi|323466383|gb|ADX70070.1| GTP-binding protein era-like protein [Lactobacillus helveticus H10]
Length = 301
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 94/186 (50%), Gaps = 18/186 (9%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
++E++ KS V ++G PN GKS+++NY+VG KVA S K TT + + G+ T Q+
Sbjct: 1 MEEKEFKSGFVALVGRPNVGKSTLMNYLVGQKVAITSNKPQTTRNRISGIYTSDKMQVVF 60
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERM 250
DTPG+ H + ++ A S +L +V +V+F V + D + L++ +
Sbjct: 61 VDTPGIF-----KPHSKLDDYMDKA-SLSSLNDVDLVLFMVESEEIGKGDQYIANLLKEV 114
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAG----LKAL 306
K L +NKVD + K LL + + + L G++ I S +G G L +
Sbjct: 115 ------KVPVFLVINKVDQIHPNK-LLPIMDSYHKLEGFKEILPISATQGIGIEDLLNTI 167
Query: 307 TQYLME 312
+YL E
Sbjct: 168 NKYLPE 173
>gi|392950931|ref|ZP_10316486.1| GTP-binding protein Era [Hydrocarboniphaga effusa AP103]
gi|391859893|gb|EIT70421.1| GTP-binding protein Era [Hydrocarboniphaga effusa AP103]
Length = 294
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 10/177 (5%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V IIG PN GKSS++N ++G KV+ VS K TT H + GV+ + QI DTPGL
Sbjct: 2 QSGIVTIIGRPNVGKSSLLNALIGRKVSIVSHKPQTTRHRIQGVLHEERGQIVFVDTPGL 61
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
G K+ ++A A++ +V +V+F V + + + ++R+ P
Sbjct: 62 ---HRGEKKALNKLMNQAAAGAIH--DVDLVLFVVEAGSFRDEDQAV--LDRLKDVTVPV 114
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
L +NKVD V K+DL E+ L + + S +G+ LK L + L ++
Sbjct: 115 G---LLVNKVDRVENKEDLFPQLEKLGALRDFAFVVPISATRGSNLKPLVKELFDRL 168
>gi|423332768|ref|ZP_17310550.1| GTP-binding protein [Lactobacillus reuteri ATCC 53608]
gi|337727886|emb|CCC02974.1| GTP-binding protein [Lactobacillus reuteri ATCC 53608]
Length = 301
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 11/175 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V IIG PN GKS+++NY+VG KVA +S TT +++ G+ T + QI DTPG
Sbjct: 7 KSGFVAIIGRPNVGKSTLLNYVVGQKVAIMSNVAQTTRNKIQGIYTSPEAQIIFIDTPG- 65
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
++K D + SA SA++ + ++ V D + IER+ K
Sbjct: 66 -IHKPSTKLGDFMEK--SAMSALDEVDAVLFVVSATEKRGPGDDFI---IERLKKV---N 116
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
Q L +NK+D + DL K+ +Q+K ++ I S L+G + L +++
Sbjct: 117 QPIFLVVNKIDQIN-PNDLPKIVDQYKDTLPFKGIVPISALQGNNVNNLINDIIK 170
>gi|332284935|ref|YP_004416846.1| GTP-binding protein [Pusillimonas sp. T7-7]
gi|330428888|gb|AEC20222.1| GTP-binding protein [Pusillimonas sp. T7-7]
Length = 295
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 84/167 (50%), Gaps = 11/167 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++G PN GKS++ N ++G+K++ VSRK TT H + GV+T+ Q DTPG
Sbjct: 10 VAVVGRPNVGKSTLTNALIGSKISIVSRKAQTTRHRIHGVLTRDHEQFVFVDTPGFQTRH 69
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
G ++ + V A + V +V + V + + ++ D++++ L+ + G +
Sbjct: 70 GGTMNRMMNRVVTQALADV---DVTVHVVEAGK-WSAGDAQLLPLLPKTGHT-------I 118
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
L +NKVD + K D+ + Y + S L+G L+ L Q
Sbjct: 119 LAVNKVDALKSKNDMFVYVSKIMAQHPYSAVVPVSALRGVQLENLLQ 165
>gi|332848215|ref|XP_511365.3| PREDICTED: GTPase Era, mitochondrial [Pan troglodytes]
gi|410227822|gb|JAA11130.1| Era G-protein-like 1 [Pan troglodytes]
gi|410250130|gb|JAA13032.1| Era G-protein-like 1 [Pan troglodytes]
gi|410290298|gb|JAA23749.1| Era G-protein-like 1 [Pan troglodytes]
gi|410338563|gb|JAA38228.1| Era G-protein-like 1 [Pan troglodytes]
Length = 437
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 53/225 (23%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ + + V ++GAPNAGKS++ N ++G KV VSRK +TT + LGV+T+ +TQ+ + DT
Sbjct: 109 ENSRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVHTTRCQALGVITEKETQVILLDT 168
Query: 195 PGLMLNKSGYSHKDVKVRVESAW----SAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM 250
PG++ H +E W SA + ++ V R+ SP +++R + +
Sbjct: 169 PGIISPGKQKRHHLELSLLEDPWKSMESADLVVVLVDVSDKWTRNQLSP--QLLRCLTKF 226
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDL----------------LKVAEQFKHLPG------ 288
Q P VL MNKVD + +K L LK+ + F PG
Sbjct: 227 -SQIP----SVLVMNKVDCLKQKSVLLELTAALTEGVVNGKKLKMRQAFHSHPGTHCPSP 281
Query: 289 --------------------YERIFMTSGLKGAGLKALTQYLMEQ 313
++ IFM S L +K L QYL+ Q
Sbjct: 282 AVKDPNTQSVGNPQRIGWPHFKEIFMLSALSQEDVKTLKQYLLTQ 326
>gi|217967705|ref|YP_002353211.1| GTP-binding protein Era [Dictyoglomus turgidum DSM 6724]
gi|217336804|gb|ACK42597.1| GTP-binding protein Era [Dictyoglomus turgidum DSM 6724]
Length = 298
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 85/178 (47%), Gaps = 16/178 (8%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
K + I+G PNAGKS++IN +VG KV+ V+ K TT +LGV+T D Q DTPG
Sbjct: 6 KLAYISIVGKPNAGKSTLINLLVGEKVSIVADKPQTTRQRILGVLTLEDAQFIFLDTPGW 65
Query: 198 MLNK---SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
K Y K +K +E + ++++ V D L + +++ ++ GK
Sbjct: 66 FPPKHLLGEYMQKTIKKTIEDS-------DIVLYVIDSSVELDDDNRTLLKFVKDQGKPY 118
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
++ +NK+D+V+ K + E E+I S L G + L + L E
Sbjct: 119 ------LVLLNKIDMVSSKSIEERKKEVIALGVSEEKIIEISALYGTNKELLIEKLKE 170
>gi|406039702|ref|ZP_11047057.1| GTPase Era [Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 349
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 10/171 (5%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D +S V I+G PN GKS+++N+++G K++ SRK TT H+++G+ ++ +Q DTP
Sbjct: 43 DFRSGFVAIVGRPNVGKSTLMNHLLGQKLSITSRKPQTTRHKIVGIDSREKSQAVFVDTP 102
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ + +K + SA VNL ++ V D + T D V +E++
Sbjct: 103 GMHKKEVRAINKMMNRAAHSALRDVNL---VLFVVDAQK-WTQNDELV---LEKLKNAEM 155
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
P +L +NK+D K + L + + L + I S L+GA L L
Sbjct: 156 PV---ILVINKLDTFENKNEALPLIRERAKLMNFAEIVPVSALRGANLDHL 203
>gi|121605951|ref|YP_983280.1| GTP-binding protein Era [Polaromonas naphthalenivorans CJ2]
gi|120594920|gb|ABM38359.1| GTP-binding protein Era [Polaromonas naphthalenivorans CJ2]
Length = 357
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 13/142 (9%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+Q+ + I+G PN GKS+++N +VG KV+ SRK TT H + G+ T+A TQ DTP
Sbjct: 66 EQRCGLIAIVGKPNVGKSTLLNALVGQKVSITSRKAQTTRHRITGMRTRAATQFVFVDTP 125
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHR-HLTSPDSRVIRLIERMGKQA 254
G ++ + V A + V+L +VF V D++V+ L+
Sbjct: 126 GFQTRHGNALNRSLNRTVVGAVNDVDL-----IVFVVEAGQFNLADAKVLALL------- 173
Query: 255 PPKQKRVLCMNKVDLVTKKKDL 276
P K +L NK DL+ ++ ++
Sbjct: 174 PEKTPAILLANKFDLIHRRAEI 195
>gi|429091145|ref|ZP_19153833.1| GTP-binding protein Era [Cronobacter dublinensis 1210]
gi|429097487|ref|ZP_19159593.1| GTP-binding protein Era [Cronobacter dublinensis 582]
gi|426283827|emb|CCJ85706.1| GTP-binding protein Era [Cronobacter dublinensis 582]
gi|426744269|emb|CCJ79946.1| GTP-binding protein Era [Cronobacter dublinensis 1210]
Length = 301
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 78/136 (57%), Gaps = 10/136 (7%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
+ I+G PN GKS+++N ++G K++ SRK TT H ++G+ T+ + Q DTPGL + +
Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGEYQAIYVDTPGLHMEE 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
K R+ + ++ ++ +V +V+F V +PD ++ R GK AP +
Sbjct: 71 -----KRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGK-APV----I 120
Query: 262 LCMNKVDLVTKKKDLL 277
L +NKVD V +K DLL
Sbjct: 121 LAINKVDNVQEKADLL 136
>gi|119571531|gb|EAW51146.1| Era G-protein-like 1 (E. coli), isoform CRA_a [Homo sapiens]
Length = 331
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 53/225 (23%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ + + V ++GAPNAGKS++ N ++G KV VSRK +TT + LGV+T+ +TQ+ + DT
Sbjct: 3 ENSRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVHTTRCQALGVITEKETQVILLDT 62
Query: 195 PGLMLNKSGYSHKDVKVRVESAW----SAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM 250
PG++ H +E W SA + ++ V R+ SP +++R + +
Sbjct: 63 PGIISPGKQKRHHLELSLLEDPWKSMESADLVVVLVDVSDKWTRNQLSP--QLLRCLTKY 120
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDL----------------LKVAEQFKHLPG------ 288
Q P VL MNKVD + +K L LK+ + F PG
Sbjct: 121 S-QIP----SVLVMNKVDCLKQKSVLLELTAALTEGVVNGKKLKMRQAFHSHPGTHCPSP 175
Query: 289 --------------------YERIFMTSGLKGAGLKALTQYLMEQ 313
++ IFM S L +K L QYL+ Q
Sbjct: 176 AVKDPNTQSVGNPQRIGWPHFKEIFMLSALSQEDVKTLKQYLLTQ 220
>gi|156975791|ref|YP_001446698.1| GTP-binding protein Era [Vibrio harveyi ATCC BAA-1116]
gi|156527385|gb|ABU72471.1| hypothetical protein VIBHAR_03535 [Vibrio harveyi ATCC BAA-1116]
Length = 320
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 12/144 (8%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+Q + I+G PN GKS+++N ++G K++ SRK TT H ++GV T+ D Q DT
Sbjct: 22 ENQHCGFIAIVGRPNVGKSTLLNKILGQKISITSRKPQTTRHRIMGVDTEGDYQAIYVDT 81
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRLIERMGKQ 253
PGL + + ++ + S+ S VNL V F V H T+ D V + ++ K
Sbjct: 82 PGLHIEEKRAINRLMNRAANSSLSDVNL-----VFFLVDGTHWTNDDEMV---LTKLQKS 133
Query: 254 APPKQKRVLCMNKVDLVTKKKDLL 277
P VLC+NKVD V + +++
Sbjct: 134 NFPV---VLCVNKVDNVQDRNEVM 154
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.132 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,903,247,436
Number of Sequences: 23463169
Number of extensions: 201851664
Number of successful extensions: 1630720
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9040
Number of HSP's successfully gapped in prelim test: 10411
Number of HSP's that attempted gapping in prelim test: 1585965
Number of HSP's gapped (non-prelim): 43643
length of query: 322
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 180
effective length of database: 9,027,425,369
effective search space: 1624936566420
effective search space used: 1624936566420
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 77 (34.3 bits)