BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020714
(322 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O82626|ERG_ANTMA GTP-binding protein ERG OS=Antirrhinum majus GN=ERG PE=2 SV=1
Length = 423
Score = 362 bits (928), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 192/321 (59%), Positives = 237/321 (73%), Gaps = 16/321 (4%)
Query: 1 MKALRALRTLAPFAEKPNKPRLNPLFIHRFYSAQPQQTDNETE-------NDCDSVFDSS 53
MKA+RA L P + +++HRFYSAQPQ TD+E + D+VFDSS
Sbjct: 1 MKAVRAALRLRPLTNSIS----TSVYLHRFYSAQPQHTDDEHHPKPEELLHQSDAVFDSS 56
Query: 54 YFRIPTIDDPQNNNAAKKQEPTWDEKYRERTDRIVFGEEAQKGKLRIFQEEEEER-KHRA 112
+F + D N A+ + TWDE+YR+R VF E+ +I + +EE++ K A
Sbjct: 57 HFDL----DLNNLAASGAETTTWDERYRDRVKSRVFDEDDTSSYSKILKRDEEKKYKSAA 112
Query: 113 LAKALLQAALERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTN 172
LAK+LL+AAL+ +E E EVKEEDQKS++VGIIGAPNAGKS++ NY+VGTKV+AVSRKTN
Sbjct: 113 LAKSLLEAALDDEEVEVGEVKEEDQKSLSVGIIGAPNAGKSALTNYIVGTKVSAVSRKTN 172
Query: 173 TTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDV 232
TTTHEVLGV+TK DTQIC FDTPGLML KSG + D+KVR ES WS++ L++VL+V+FDV
Sbjct: 173 TTTHEVLGVLTKRDTQICFFDTPGLMLKKSGIPYNDIKVRNESGWSSITLYDVLIVIFDV 232
Query: 233 HRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERI 292
HRHLT PDSRV+RLIER+G + QKRVLCMNKVDLVTKK DL+KVA++FK LPGYER
Sbjct: 233 HRHLTRPDSRVVRLIERVGSVSSTSQKRVLCMNKVDLVTKKNDLVKVAKEFKDLPGYERH 292
Query: 293 FMTSGLKGAGLKALTQYLMEQ 313
FM SGLKG GLK L QYL EQ
Sbjct: 293 FMVSGLKGYGLKDLAQYLTEQ 313
>sp|O82653|ERG_ARATH GTP-binding protein ERG OS=Arabidopsis thaliana GN=ERG PE=1 SV=2
Length = 437
Score = 343 bits (881), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 182/327 (55%), Positives = 232/327 (70%), Gaps = 14/327 (4%)
Query: 1 MKALRALRTLAPFAEK-----PNKPRLNPLFIHRFYSAQPQQTDNETENDCDSVFDSSYF 55
MKA R+LR L + P P F+ RFYSAQP + + N+ S DS +
Sbjct: 1 MKAFRSLRILISISRTTTKTTPRNPHQAQNFLRRFYSAQPNLDEPTSINEDGSSSDSVFD 60
Query: 56 RIPT-IDDPQNNNAAKKQEPTWDEKYRERTDRIVFGEEAQKGKLRIFQEEEEERKHRALA 114
IDD ++ K +E TWD+ YRER ++ FG +KGK+++ +EE E ++
Sbjct: 61 SSQYPIDDSNVDSVKKPKEATWDKGYRERVNKAFFGNLTEKGKVKVAEEESSEDDEDSVD 120
Query: 115 KALLQAALER--------QEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAA 166
++ + A +E E EV+EEDQKS+ VGIIG PNAGKSS+ N+MVGTKVAA
Sbjct: 121 RSRILAKALLEAALESPDEELGEGEVREEDQKSLNVGIIGPPNAGKSSLTNFMVGTKVAA 180
Query: 167 VSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVL 226
SRKTNTTTHEVLGV+TK DTQ+C FDTPGLML KSGY +KD+K RV++AW++V+LF+VL
Sbjct: 181 ASRKTNTTTHEVLGVLTKGDTQVCFFDTPGLMLKKSGYGYKDIKARVQNAWTSVDLFDVL 240
Query: 227 MVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHL 286
+V+FDVHRHL SPDSRV+RLI+ MG++ PKQKRVLCMNKVDLV KKKDLLKVAE+F+ L
Sbjct: 241 IVMFDVHRHLMSPDSRVVRLIKYMGEEENPKQKRVLCMNKVDLVEKKKDLLKVAEEFQDL 300
Query: 287 PGYERIFMTSGLKGAGLKALTQYLMEQ 313
P YER FM SGLKG+G+K L+QYLM+Q
Sbjct: 301 PAYERYFMISGLKGSGVKDLSQYLMDQ 327
>sp|Q8G1P9|ERA_BRUSU GTPase Era OS=Brucella suis biovar 1 (strain 1330) GN=era PE=3 SV=1
Length = 311
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
E + +S V +IGAPNAGKS+++N +VGTKV+ V+ K TT V G+ + QI
Sbjct: 11 ETEATQTRSGFVALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEGPAQIV 70
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM 250
+ DTPG+ K + V +AW ++++V+ D + L+E M
Sbjct: 71 LVDTPGIFRPKRRLD----RAMVTTAWGGAKDADIILVIIDAQGGF---NENAEALLESM 123
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+QK+VL +NKVD V LL +A++ L ++R FM S L G+G K L +YL
Sbjct: 124 KDV---RQKKVLVLNKVDRVDPPV-LLSLAQKANELVPFDRTFMISALNGSGCKDLAKYL 179
Query: 311 ME 312
E
Sbjct: 180 AE 181
>sp|Q8YG75|ERA_BRUME GTPase Era OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=era PE=3 SV=1
Length = 311
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 11/182 (6%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
E + +S V +IGAPNAGKS+++N +VGTKV+ V+ K TT V G+ + QI
Sbjct: 11 ETEATQTRSGFVALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEGPAQIV 70
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM 250
+ DTPG+ K + V +AW ++++V+ D + L+E M
Sbjct: 71 LVDTPGIFRPKRRLD----RAMVTTAWGGAKDADIILVIIDAQGGF---NENAEALLESM 123
Query: 251 GKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+QK+VL +NKVD V LL +A++ L ++R FM S L G+G K L +YL
Sbjct: 124 KDV---RQKKVLVLNKVDRVDPPV-LLSLAQKANGLVPFDRTFMISALNGSGCKDLAKYL 179
Query: 311 ME 312
E
Sbjct: 180 AE 181
>sp|A5EKL6|ERA_BRASB GTPase Era OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
GN=era PE=3 SV=1
Length = 308
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 92/169 (54%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VSRK TT + G++ + +QI + DTPG+ K
Sbjct: 18 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEGTSQIILVDTPGIFSPK 77
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D + L +I K A +++
Sbjct: 78 RRLD----RAMVTTAWSGAHDADLVCVLLDAKKGLDDEAQAII------DKAAAVAHQKI 127
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NKVDLV ++K L VA + LP + R FM S L G G+ L Q L
Sbjct: 128 LVVNKVDLVPREKLLALVAAANEKLP-FARTFMISALSGDGVDDLKQAL 175
>sp|Q8UGK1|ERA_AGRT5 GTPase Era OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970)
GN=era PE=3 SV=1
Length = 317
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IG NAGKS+++N +VG KV+ VS K TT + G+ + QI DTPG+
Sbjct: 23 RSGFVALIGPTNAGKSTLVNRLVGAKVSIVSHKVQTTRAVMRGIAIHKNAQIVFMDTPGI 82
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + V SAW ++++++ D R L ++ + K P
Sbjct: 83 FKPRRRLD----RAMVTSAWGGAKDADLILLLIDSERGLKGDAEAILEGL----KDVP-- 132
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
QK++LC+NK+D V K++DLLK+A ++R FM S G+G + L YL+E
Sbjct: 133 QKKILCLNKIDQV-KREDLLKLAAAANEKVAFDRTFMISATNGSGCEDLMDYLVETL 188
>sp|A6U7A9|ERA_SINMW GTPase Era OS=Sinorhizobium medicae (strain WSM419) GN=era PE=3
SV=1
Length = 310
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 94/177 (53%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IGA NAGKS++IN +VG KV+ VS K TT V G+ + QI DTPG+
Sbjct: 17 RSGFVALIGATNAGKSTLINRLVGAKVSIVSHKVQTTRAIVRGIAIHDNAQIVFMDTPGI 76
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + V +AW +++M++ D R + ++ ++ +
Sbjct: 77 FKPRRRLD----RAMVTTAWGGAKDADLIMLLIDSERGIKGDADTILEGLKDV------H 126
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
Q +VL +NKVD V +++DLLK+A + +ER FM S L G+G + + YL E+
Sbjct: 127 QPKVLVLNKVDQV-RREDLLKLAAAANEVVAFERTFMISALTGSGCEDVMDYLAERL 182
>sp|A4YWC7|ERA_BRASO GTPase Era OS=Bradyrhizobium sp. (strain ORS278) GN=era PE=3 SV=1
Length = 307
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 92/171 (53%), Gaps = 11/171 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VSRK TT + G++ + +QI + DTPG+ K
Sbjct: 17 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEGQSQIILVDTPGIFSPK 76
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D + L +I K A +++
Sbjct: 77 RRLD----RAMVTTAWSGAHDADLVCVLLDAKKGLDDEAQAII------DKAASVAHEKI 126
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L +NKVDLV ++K L VA + L + R FM S L G G+ L + L E
Sbjct: 127 LVVNKVDLVPREKLLALVAAANEKL-AFARTFMISALSGDGVDDLRRALAE 176
>sp|Q92R46|ERA_RHIME GTPase Era OS=Rhizobium meliloti (strain 1021) GN=era PE=3 SV=1
Length = 313
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
+S V +IGA NAGKS+++N +VG KV+ VS K TT + G+ QI DTPG+
Sbjct: 20 RSGFVALIGATNAGKSTLVNRLVGAKVSIVSHKVQTTRAIIRGIAIHGSAQIVFMDTPGI 79
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
+ + V +AW +++M++ D R + ++ ++ +
Sbjct: 80 FKPRRRLD----RAMVTTAWGGAKDADLIMLLIDSERGIKGDAEAILEGLKEV------H 129
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
Q +VL +NKVD V +++DLLK+A + +ER FM S L G+G + + YL E
Sbjct: 130 QPKVLVLNKVDQV-RREDLLKLAAAANDVVAFERTFMISALTGSGCEDVMDYLAETL 185
>sp|Q0APC5|ERA_MARMM GTPase Era OS=Maricaulis maris (strain MCS10) GN=era PE=3 SV=1
Length = 314
Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 95/178 (53%), Gaps = 19/178 (10%)
Query: 144 IIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSG 203
+IG+PNAGKS+++N +VG KV V+ K TT V GV +TQI + DTPG+ K+
Sbjct: 13 VIGSPNAGKSTLVNALVGEKVTIVTHKVQTTRFAVRGVALAGETQIVLVDTPGVFAPKTR 72
Query: 204 YSHKDVKVRVESAWSAVNLFEVLMVVFDV-------HRHLTSPDSRVI----RLIERMGK 252
K V +AWS + +M V D H S DSR++ R+ E + K
Sbjct: 73 LD----KSMVAAAWSGAGEADTIMHVVDAGARARMEHGGAKSGDSRMVEDDDRVTEGLKK 128
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+QK +L +NKVDL+ + + LL ++++ Y +FM S G+G+ L +++
Sbjct: 129 T---EQKAILVLNKVDLMPRDQ-LLAMSQELYETGVYSEVFMISAKTGSGVPQLREFI 182
>sp|P58071|ERA_CAUCR GTPase Era OS=Caulobacter crescentus (strain ATCC 19089 / CB15)
GN=era PE=3 SV=1
Length = 316
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 94/179 (52%), Gaps = 19/179 (10%)
Query: 144 IIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSG 203
IIGAPNAGKS+++N MVG KV+ V++K TT V GV + DTQI + DTPG+ +
Sbjct: 15 IIGAPNAGKSTLVNRMVGAKVSIVTQKVQTTRFPVRGVAIEGDTQIVLVDTPGIFSPRRR 74
Query: 204 YSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSR-----------VIRLIERMGK 252
+ V +AW+ E + + DV L S + V +IE G
Sbjct: 75 LD----RAMVRAAWAGSEEAEATVHLVDVQAELASRADKATPGEYRSAQDVQTIIE--GL 128
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
+A + K +L +NK+D + K+ LL VA+ F Y +FM S GAG++ LT L+
Sbjct: 129 KAADR-KVILALNKIDGI-KRDTLLAVAKDFFDTGVYSDVFMISASTGAGVEDLTAKLV 185
>sp|B8H630|ERA_CAUCN GTPase Era OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=era
PE=3 SV=1
Length = 316
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 94/179 (52%), Gaps = 19/179 (10%)
Query: 144 IIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSG 203
IIGAPNAGKS+++N MVG KV+ V++K TT V GV + DTQI + DTPG+ +
Sbjct: 15 IIGAPNAGKSTLVNRMVGAKVSIVTQKVQTTRFPVRGVAIEGDTQIVLVDTPGIFSPRRR 74
Query: 204 YSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSR-----------VIRLIERMGK 252
+ V +AW+ E + + DV L S + V +IE G
Sbjct: 75 LD----RAMVRAAWAGSEEAEATVHLVDVQAELASRADKATPGEYRSAQDVQTIIE--GL 128
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
+A + K +L +NK+D + K+ LL VA+ F Y +FM S GAG++ LT L+
Sbjct: 129 KAADR-KVILALNKIDGI-KRDTLLAVAKDFFDTGVYSDVFMISASTGAGVEDLTAKLV 185
>sp|B6JGG2|ERA_OLICO GTPase Era OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM
1227 / OM5) GN=era PE=3 SV=1
Length = 308
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 89/169 (52%), Gaps = 11/169 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VSRK TT + G++ + + QI + DTPG+ K
Sbjct: 18 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVVEGNAQIVLVDTPGIFTPK 77
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D L + +E + K +
Sbjct: 78 RRLD----RAMVSTAWSGAHDADMVCVLLDARAGLDEEAEAIFTKLEAV------KHPKF 127
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+DLV ++K LL +A++ + FM + L G G+ L + L
Sbjct: 128 LVINKIDLVAREK-LLALAQRANERIAFRETFMVAALSGDGVDDLRRAL 175
>sp|A1VHK4|ERA_DESVV GTPase Era OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4)
GN=era PE=3 SV=1
Length = 308
Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 96/173 (55%), Gaps = 10/173 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N ++G KVA V+ K TT ++++G++++ D Q+ DTPG+ +
Sbjct: 11 VALIGPPNAGKSTLLNALIGQKVAIVTSKPQTTRNQIVGILSRKDAQVVFMDTPGIHQLR 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSP---DSRVIRLIERMGKQAPPKQ 258
+ K+ +++AW ++N + L+V+ D ++ P D + L+E + + P
Sbjct: 71 GRLN----KMLLQTAWQSMNAADALIVMLDGDLYIRKPDLLDRDIAPLVEPIAAETRPV- 125
Query: 259 KRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
V+ +NK+DL K +L + E+ + +F S L G+ L + ++
Sbjct: 126 --VVVVNKIDLFRDKSKMLPLLERLSAMWPKAEVFPASALNKDGMDHLLRLIV 176
>sp|Q72G11|ERA_DESVH GTPase Era OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB 8303) GN=era PE=3 SV=1
Length = 308
Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 96/173 (55%), Gaps = 10/173 (5%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N ++G KVA V+ K TT ++++G++++ D Q+ DTPG+ +
Sbjct: 11 VALIGPPNAGKSTLLNALIGQKVAIVTSKPQTTRNQIVGILSRKDAQVVFMDTPGIHQLR 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSP---DSRVIRLIERMGKQAPPKQ 258
+ K+ +++AW ++N + L+V+ D ++ P D + L+E + + P
Sbjct: 71 GRLN----KMLLQTAWQSMNAADALIVMLDGDLYIRKPDLLDRDIAPLVEPIAAETRPV- 125
Query: 259 KRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
V+ +NK+DL K +L + E+ + +F S L G+ L + ++
Sbjct: 126 --VVVVNKIDLFRDKSKMLPLLERLSAMWPKAEVFPASALNKDGMDHLLRLIV 176
>sp|B5X2B8|ERAL1_SALSA GTPase Era, mitochondrial OS=Salmo salar GN=eral1 PE=2 SV=1
Length = 457
Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 83/147 (56%), Gaps = 7/147 (4%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ K + V IIGAPNAGKS++ N ++G KV AVS+K +TT LGV+T+ DTQI + DT
Sbjct: 104 ENSKVLRVAIIGAPNAGKSTLSNQLLGRKVFAVSKKVHTTRARALGVLTEDDTQIILLDT 163
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSP--DSRVIRLIERMGK 252
PGL H+ K +E W+ V +++V+ DV D V++ + +
Sbjct: 164 PGLTTPTKVKRHQLEKSLLEDPWNTVKEAGLVVVMVDVSDKWACNKLDFEVLKCLTQH-- 221
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKV 279
P VL +NKVDL+ K LL++
Sbjct: 222 ---PDVPAVLVLNKVDLLKSKSRLLEI 245
>sp|Q985A5|ERA_RHILO GTPase Era OS=Rhizobium loti (strain MAFF303099) GN=era PE=3 SV=1
Length = 310
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 122 LERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGV 181
+ER + E + S V +IGAPNAGKS+++N +VG KV+ V+ K TT V G+
Sbjct: 1 MERGMTDIETAETPATHSGFVALIGAPNAGKSTLVNQLVGAKVSIVTHKVQTTRAIVRGI 60
Query: 182 MTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDS 241
T + QI DTPG+ K V +AW ++++++ D R + D+
Sbjct: 61 ATHDNAQIVFVDTPGIFKPKRRLD----TAMVTTAWGGAKDADIVLLLIDAERGIRG-DA 115
Query: 242 RVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGA 301
I +ER+ +Q L +NKVD V K + LL ++ ++R FM S L G+
Sbjct: 116 DAI--LERLKDV---RQPMALILNKVDRV-KHETLLALSAAANEKVPFKRTFMVSALTGS 169
Query: 302 GLKALTQYLMEQF 314
G K L YL +
Sbjct: 170 GCKDLLDYLAQAL 182
>sp|O69162|ERA_BRAJA GTPase Era OS=Bradyrhizobium japonicum (strain USDA 110) GN=era
PE=3 SV=3
Length = 308
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 11/171 (6%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG KV VSRK TT + G++ + + QI + DTPG+ K
Sbjct: 18 VALIGAPNVGKSTLVNALVGAKVTIVSRKVQTTRALIRGIVIENNAQIILVDTPGIFSPK 77
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AWS + +++ V+ D + + + K A ++
Sbjct: 78 RRLD----RAMVSTAWSGAHDADLVCVLLDAKTGIDEEAEAI------LAKAASVNHDKI 127
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
L +NKVDLV ++K LL +A+ + + FM + + G G+ L L E
Sbjct: 128 LVINKVDLVQREK-LLALAQAANERMPFAKTFMIAAISGDGVDDLRSTLAE 177
>sp|B8DQN1|ERA_DESVM GTPase Era OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM
19637) GN=era PE=3 SV=1
Length = 307
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 94/169 (55%), Gaps = 4/169 (2%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++G PNAGKS+++N +G KVA V+ + TT ++++G++++ D Q+ DTPG+ +
Sbjct: 11 VALLGPPNAGKSTLLNSALGHKVAIVTPRAQTTRNQIVGILSEPDAQVIFMDTPGIHQQR 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ K+ +++AW +++ +V++V+ D ++ PD + M A ++ +
Sbjct: 71 GRMN----KILLQTAWQSMHSADVILVMLDADLYIKKPDFLENDVKPLMDAVAAEERPVI 126
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ +NKVDL K +L + + + L +F S LK GL L + +
Sbjct: 127 VAVNKVDLFRDKSKMLPLFIELQKLWPKAEVFPVSALKRDGLPELVKLV 175
>sp|Q8JIF5|ERAL1_CHICK GTPase Era, mitochondrial OS=Gallus gallus GN=ERAL1 PE=1 SV=1
Length = 461
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 82/150 (54%), Gaps = 7/150 (4%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ K + + IIGAPN+GKS++ N ++G KV VS+K +TT + GV+T DTQ+ I DTP
Sbjct: 87 EPKVLRISIIGAPNSGKSTLSNQLLGRKVFPVSKKVHTTRCKARGVITHEDTQLIILDTP 146
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLT--SPDSRVIRLIERMGKQ 253
GL HK + W ++ ++++V+ DV H T S V++ + +
Sbjct: 147 GLTSPMKAKRHKLEAAMLTDPWDSMKHADLVLVLVDVSDHWTRNSLSLEVLKCLSQF--- 203
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQF 283
P VL +NKVDL+ KK LL + +
Sbjct: 204 --PHIPSVLVLNKVDLLKKKIILLGLINEL 231
>sp|B8J3P9|ERA_DESDA GTPase Era OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM
6949) GN=era PE=3 SV=1
Length = 307
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 4/169 (2%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++G PNAGKS+++N ++G KV V+ K TT ++++G++T D Q DTPGL +
Sbjct: 11 VALMGPPNAGKSTLLNALLGQKVTIVTPKPQTTRNQIVGILTDDDAQTIFMDTPGLTQVR 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
S K +++ W ++N +++M V D H ++ P+ L A ++ +
Sbjct: 71 GRLS----KTMIQAVWQSLNQADIIMPVLDAHLYIRHPEFLDRDLAPVAQALASEERPMI 126
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ +NKVDL K +L + + + IF S L GL L + +
Sbjct: 127 VVVNKVDLFGDKSRMLPLLTRLHEMWPRADIFPISALHKDGLADLVELI 175
>sp|Q92BP8|ERA_LISIN GTPase Era OS=Listeria innocua serovar 6a (strain CLIP 11262)
GN=era PE=3 SV=1
Length = 301
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 96/174 (55%), Gaps = 17/174 (9%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N+++G K+A +S K TT ++V GV T ++QI DTPG
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVFTTDESQIIFIDTPG- 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFE---VLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
++K + D V++ A+N F+ ++ V D D +I ++ + Q
Sbjct: 65 -IHKPKHKLGDFMVKI-----ALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNV--QT 116
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
P L +NK+DL++ +DL+K+ EQ++ L +E I S L+G + L +
Sbjct: 117 P----VFLLINKIDLIS-PEDLIKLIEQYRELMDFEEIIPISALEGNNVPNLLE 165
>sp|A0AIR3|ERA_LISW6 GTPase Era OS=Listeria welshimeri serovar 6b (strain ATCC 35897 /
DSM 20650 / SLCC5334) GN=era PE=3 SV=1
Length = 301
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 95/174 (54%), Gaps = 17/174 (9%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N+++G K+A +S K TT ++V GV T ++QI DTPG
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPG- 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFE---VLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
++K + D V++ A+N F+ ++ V D D +I ++ + Q
Sbjct: 65 -IHKPKHKLGDFMVKI-----ALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNV--QT 116
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
P L +NK+DL++ +DL K+ EQ++ L +E I S L+G + L +
Sbjct: 117 P----VFLLINKIDLIS-PEDLFKLIEQYRELLDFEEIIPISALQGNNVPNLLE 165
>sp|Q1RHA4|ERA_RICBR GTPase Era OS=Rickettsia bellii (strain RML369-C) GN=era PE=3 SV=1
Length = 295
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 97/181 (53%), Gaps = 16/181 (8%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQI ++DTPG
Sbjct: 6 QKTVSVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLNDTQIILYDTPG 65
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ K K V AWS+++ +++M++ D + L S ++ + + P
Sbjct: 66 IFEPKGTLE----KAMVRCAWSSLHSADIVMLIIDSLKPLDSITHDILNKLRSLN-VVP- 119
Query: 257 KQKRVLCMNKVDLVTKKKDLLK--VAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
V +NK+D+ +K D K +AE + +F S + G + L +Y+ +
Sbjct: 120 ----VFLLNKIDVESKYIDDTKAFLAENYSD----SLLFPISAISGENVDKLLEYITSKA 171
Query: 315 K 315
K
Sbjct: 172 K 172
>sp|A8GUZ8|ERA_RICB8 GTPase Era OS=Rickettsia bellii (strain OSU 85-389) GN=era PE=3
SV=1
Length = 295
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 97/181 (53%), Gaps = 16/181 (8%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQI ++DTPG
Sbjct: 6 QKTVSVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLNDTQIILYDTPG 65
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ K K V AWS+++ +++M++ D + L S ++ + + P
Sbjct: 66 IFEPKGTLE----KAMVRCAWSSLHSADIVMLIIDSLKPLDSITHDILNKLRSLN-VVP- 119
Query: 257 KQKRVLCMNKVDLVTKKKDLLK--VAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
V +NK+D+ +K D K +AE + +F S + G + L +Y+ +
Sbjct: 120 ----VFLLNKIDVESKYIDDTKAFLAENYSD----SLLFPISAISGENVDKLLEYITSKA 171
Query: 315 K 315
K
Sbjct: 172 K 172
>sp|Q8Y750|ERA_LISMO GTPase Era OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=era PE=3 SV=1
Length = 301
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 94/174 (54%), Gaps = 17/174 (9%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N+++G K+A +S K TT ++V GV T ++QI DTPG
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPG- 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFE---VLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
++K + D V++ A+N F+ ++ V D D +I ++ + Q
Sbjct: 65 -IHKPKHKLGDFMVKI-----ALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNV--QT 116
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
P L +NK+DL+ +DL K+ EQ++ L ++ I S L+G + L +
Sbjct: 117 P----VFLLINKIDLIA-PEDLFKLIEQYRDLMDFDEIIPISALQGNNVPNLLE 165
>sp|Q71ZK8|ERA_LISMF GTPase Era OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=era PE=3 SV=1
Length = 301
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 94/174 (54%), Gaps = 17/174 (9%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N+++G K+A +S K TT ++V GV T ++QI DTPG
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPG- 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFE---VLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
++K + D V++ A+N F+ ++ V D D +I ++ + Q
Sbjct: 65 -IHKPKHKLGDFMVKI-----ALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNV--QT 116
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
P L +NK+DL+ +DL K+ EQ++ L ++ I S L+G + L +
Sbjct: 117 P----VFLLINKIDLIA-PEDLFKLIEQYRDLMDFDEIIPISALQGNNVPNLLE 165
>sp|C1KVA9|ERA_LISMC GTPase Era OS=Listeria monocytogenes serotype 4b (strain CLIP80459)
GN=era PE=3 SV=1
Length = 301
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 94/174 (54%), Gaps = 17/174 (9%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N+++G K+A +S K TT ++V GV T ++QI DTPG
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPG- 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFE---VLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
++K + D V++ A+N F+ ++ V D D +I ++ + Q
Sbjct: 65 -IHKPKHKLGDFMVKI-----ALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNV--QT 116
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
P L +NK+DL+ +DL K+ EQ++ L ++ I S L+G + L +
Sbjct: 117 P----VFLLINKIDLIA-PEDLFKLIEQYRDLMDFDEIIPISALQGNNVPNLLE 165
>sp|B8DE49|ERA_LISMH GTPase Era OS=Listeria monocytogenes serotype 4a (strain HCC23)
GN=era PE=3 SV=1
Length = 301
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 94/174 (54%), Gaps = 17/174 (9%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+++N+++G K+A +S K TT ++V GV T ++QI DTPG
Sbjct: 6 KSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPG- 64
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFE---VLMVVFDVHRHLTSPDSRVIRLIERMGKQA 254
++K + D V++ A+N F+ ++ V D D +I ++ + Q
Sbjct: 65 -IHKPKHKLGDFMVKI-----ALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNV--QT 116
Query: 255 PPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQ 308
P L +NK+DL+ +DL K+ EQ++ L ++ I S L+G + L +
Sbjct: 117 P----VFLLINKIDLIA-PEDLFKLIEQYRDLMEFDEIIPISALQGNNVPNLLE 165
>sp|Q3YRS0|ERA_EHRCJ GTPase Era OS=Ehrlichia canis (strain Jake) GN=era PE=3 SV=1
Length = 296
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 11/177 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
D+K I+G NAGKS++IN +VG KVAAV+ K TT + V+ + Q+ DTP
Sbjct: 5 DKKCSMNAIVGTTNAGKSTLINMLVGRKVAAVTPKVQTTRVRMHAVLNNENVQLIFIDTP 64
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K+ K K V+ AW ++ E ++++ DV +L ++I I++ A
Sbjct: 65 GIFSPKT----KLEKFIVKHAWMSLKGIENVILLLDVKNYLNKHIEKIISRIKQSNINA- 119
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
+L +NK+D+V++ + K E L + + F S L GL L YL E
Sbjct: 120 -----ILVVNKIDMVSQAL-VDKAIEYMYSLHNFSKTFTISALHDIGLNRLINYLCE 170
>sp|Q92JA9|ERA_RICCN GTPase Era OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7)
GN=era PE=3 SV=1
Length = 339
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 99/184 (53%), Gaps = 14/184 (7%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
K +QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++
Sbjct: 46 KMSNQKTVSVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILY 105
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERM-G 251
DTPG+ K K V AWS+++ ++++++ D L S D +++++
Sbjct: 106 DTPGIFEPKGSLE----KAMVRCAWSSLHSADLVLLIID---SLKSFDDITHNIVDKLRS 158
Query: 252 KQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLM 311
P + +NK+D+ +K + +K H P +F S L G + L +Y+
Sbjct: 159 LNIVP----IFLLNKIDIESKYLNDIKAFLTENH-PD-SLLFPISALSGKNIDGLLEYIT 212
Query: 312 EQFK 315
+ K
Sbjct: 213 SKAK 216
>sp|Q2NB82|ERA_ERYLH GTPase Era OS=Erythrobacter litoralis (strain HTCC2594) GN=era PE=3
SV=1
Length = 304
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 21/184 (11%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMT----KADTQI 189
E+ K V ++GAPNAGKS+++N +VG KVA S K TT +LG+ A TQ+
Sbjct: 3 EKISKCGVVAVLGAPNAGKSTLVNQLVGQKVAITSAKAQTTRARMLGIALHESDDAKTQM 62
Query: 190 CIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDV---HRHLTSPDSRVIRL 246
+ DTPG+ + + V +AW + ++++ D RH P L
Sbjct: 63 ILVDTPGIFAPRRRLD----RAMVSAAWEGAESADAVLLLVDPVKQRRHELEP------L 112
Query: 247 IERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
+E + K P ++++L +NKVD V KK+ LL +A+ + I+ S L G G+ +
Sbjct: 113 LESL-KDRP--ERKILVLNKVD-VAKKEPLLALAQDLSQKVDFAEIYFVSALTGDGVPEM 168
Query: 307 TQYL 310
L
Sbjct: 169 KNAL 172
>sp|B8I736|ERA_CLOCE GTPase Era OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM
5812 / JCM 6584 / H10) GN=era PE=3 SV=1
Length = 298
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V +IG PN GKS+++N + G K+A +S K TT + + GV+T + Q+ + DTPG+
Sbjct: 4 KSGFVSVIGRPNVGKSTLLNTITGQKIAIMSNKPQTTRNTIRGVITNKECQLILIDTPGI 63
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPK 257
K+ V V E+ + EV +++F V + T P ++ + +I+++ + P
Sbjct: 64 HKPKTKLGEYMVNVASET------IKEVDLILFLVEAN-TQPGAQDVNIIQQLKQIKTP- 115
Query: 258 QKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGL 303
L +NKVDL++K K LL + + + L ++ I S LK G+
Sbjct: 116 --VFLILNKVDLISKDK-LLAIIDSYSKLMDFKAIIPISALKNDGI 158
>sp|Q5HAY9|ERA_EHRRW GTPase Era OS=Ehrlichia ruminantium (strain Welgevonden) GN=era
PE=3 SV=1
Length = 296
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 11/170 (6%)
Query: 143 GIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKS 202
I+GA NAGKS+++N +VG KVAAV+ K TT + V + Q+ DTPG+ K+
Sbjct: 12 AIVGATNAGKSTLVNVLVGQKVAAVTPKVQTTRVRMHAVSNHENVQLIFIDTPGIFSPKT 71
Query: 203 GYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVL 262
K K V+ AW ++ E ++V+ DV +L ++I I+ A +L
Sbjct: 72 ----KLEKFLVKHAWMSLKGIENVIVLVDVKNYLNQHLKKIIDRIKHSNLNA------IL 121
Query: 263 CMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
+NK+D+V + + +V E L + + F S L G G+ L YL E
Sbjct: 122 VLNKIDIV-HQSIVSEVIEYMYSLYKFSKAFTISALYGIGIDKLVDYLCE 170
>sp|Q2GGZ1|ERA_EHRCR GTPase Era OS=Ehrlichia chaffeensis (strain Arkansas) GN=era PE=3
SV=1
Length = 296
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 85/171 (49%), Gaps = 13/171 (7%)
Query: 143 GIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKS 202
I+G NAGKS++IN +VG KVAAV+ K TT + V+ + Q+ DTPG+ K+
Sbjct: 12 AIVGTTNAGKSTLINMLVGQKVAAVTPKVQTTRVRMHAVLNNENVQLIFIDTPGIFSPKT 71
Query: 203 GYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVL 262
K K V+ AW ++ E ++++ DV +L ++I I++ A +L
Sbjct: 72 ----KLEKFIVKHAWMSLKGIENVILLLDVKNYLNKHIEKIISRIKQSNINA------IL 121
Query: 263 CMNKVDLV-TKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
+NK+D V T D K E L + + F S L GL L YL E
Sbjct: 122 VVNKIDTVPTSSVD--KAIEHMYSLHSFSKTFTISALHDIGLSRLVDYLCE 170
>sp|A8LLE0|ERA_DINSH GTPase Era OS=Dinoroseobacter shibae (strain DFL 12) GN=era PE=3
SV=1
Length = 308
Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 8/169 (4%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS++ N MVG KV+ V+ K TT + GV + QI DTPGL +
Sbjct: 13 VALIGEPNAGKSTLTNAMVGAKVSIVTHKVQTTRARIRGVALEGAAQIVFVDTPGLFRPR 72
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
+ V +AW ++++++ + HR +T V ++E + ++ PKQ
Sbjct: 73 RRLD----RAMVAAAWGGAADADIVVLMVEAHRGMTDG---VRAILETLNERRDPKQIVA 125
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
L +NK+D V K + LLK+ + + FM S KG G+ L +L
Sbjct: 126 LAINKIDRV-KSEVLLKLTQDLNAAYPFAETFMISAEKGYGVADLRAWL 173
>sp|Q8EPY0|ERA_OCEIH GTPase Era OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM
11309 / KCTC 3954 / HTE831) GN=era PE=3 SV=1
Length = 300
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 11/181 (6%)
Query: 134 EEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFD 193
E + KS + IIG PN GKS+ +N ++G K+A +S K TT +++ GV T D Q+ D
Sbjct: 2 ETNFKSGFLSIIGRPNVGKSTFMNKVIGQKIAIMSDKAQTTRNKIQGVFTTNDAQMIFID 61
Query: 194 TPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQ 253
TPG+ K H+ V+ A +N + ++ + + D +I L++++
Sbjct: 62 TPGIHKPK----HRLGDFMVQIAEDTLNEVDSILFMINADEGYGRGDQYIIDLLQKVNSP 117
Query: 254 APPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQ 313
L +NK+DL+ + LL + E++K L +E I S L+G + L L E
Sbjct: 118 V------FLIINKIDLIHPDQ-LLPLIEKYKSLYDFEEIIPISALEGNNVDHLVDVLKEH 170
Query: 314 F 314
Sbjct: 171 L 171
>sp|Q9KD52|ERA_BACHD GTPase Era OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197
/ FERM 7344 / JCM 9153 / C-125) GN=era PE=3 SV=1
Length = 304
Score = 81.3 bits (199), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 92/174 (52%), Gaps = 11/174 (6%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
++E KS V IIG PN GKS+++N+++G K+A +S K TT +++ GV T D+QI
Sbjct: 4 QKEGFKSGFVSIIGRPNVGKSTLLNHVIGQKIAIMSDKPQTTRNKIQGVYTSEDSQIVFI 63
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGK 252
DTPG+ K HK ++ A + + ++++ V D P I IER+ +
Sbjct: 64 DTPGIHKPK----HKLGDFMMKVAQNTLKEVDLILYVVDGAEAF-GPGEEFI--IERLKE 116
Query: 253 QAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
P +L +NK+D V DLL + E ++H +E + S L+G + L
Sbjct: 117 AKTP---VILVINKIDKV-HPDDLLSLIETYRHKHEFEEVVPVSALQGNNVPTL 166
>sp|Q5FFN4|ERA_EHRRG GTPase Era OS=Ehrlichia ruminantium (strain Gardel) GN=era PE=3
SV=1
Length = 296
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 11/170 (6%)
Query: 143 GIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKS 202
I+G NAGKS+++N +VG KVAAV+ K TT + V + Q+ DTPG+ K+
Sbjct: 12 AIVGTTNAGKSTLVNVLVGQKVAAVTPKVQTTRVRMHAVSNHENVQLIFIDTPGIFSPKT 71
Query: 203 GYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRVL 262
K K V+ AW ++ E ++V+ DV +L ++I I+ A +L
Sbjct: 72 ----KLEKFLVKHAWMSLKGIENVIVLVDVKNYLNQHLKKIIDRIKHSNLNA------IL 121
Query: 263 CMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
+NK+D+V + + +V E L + + F S L G G+ L YL E
Sbjct: 122 VLNKIDIV-HQSIVSEVIEYMYSLYKFSKAFTISALYGIGIDKLVDYLCE 170
>sp|A8GM80|ERA_RICAH GTPase Era OS=Rickettsia akari (strain Hartford) GN=era PE=3 SV=1
Length = 293
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 12/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+Q++++V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++DTP
Sbjct: 3 NQRTISVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILYDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K K V AWS+++ +++M++ D + ++ + +
Sbjct: 63 GIFEPKGSLE----KAMVRCAWSSLHSADLVMLIIDSLKPFDDVTHDILDKLRSLNIVP- 117
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ +NK+D+ +K D +K H P F S L G + L +Y+
Sbjct: 118 -----IFLLNKIDIESKYLDDIKAFLIGNH-PD-SLFFPISALSGKNINGLLEYI 165
>sp|Q4L6R7|ERA_STAHJ GTPase Era OS=Staphylococcus haemolyticus (strain JCSC1435) GN=era
PE=3 SV=2
Length = 299
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 91/175 (52%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFMNRVIGHKIAIMSDKAQTTRNKIQGVMTRNDAQIIFLDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D +RV A + ++ + +M + +V+ + D ++ +++ +
Sbjct: 63 G--IHKPKHKLGDYMMRV--AKNTLSEIDAIMFMVNVNEEIGRGDEYIMEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV L+ EQ++ + I S L+G + L
Sbjct: 114 -KTPVFLVLNKIDLVHPDA-LMPRIEQYQKYMNFTEIVPISALEGLNVDHFIDVL 166
>sp|Q8CP21|ERA_STAES GTPase Era OS=Staphylococcus epidermidis (strain ATCC 12228) GN=era
PE=3 SV=1
Length = 299
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D +RV A + ++ + +M + +V+ + D ++ +++ +
Sbjct: 63 G--IHKPKHKLGDYMMRV--AKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV + K+ EQ++ + I S L+G + L
Sbjct: 114 -KTPIFLVLNKIDLVHPDTLMPKI-EQYQSYMDFTDIIPISALEGLNVDHFIDVL 166
>sp|Q49Y10|ERA_STAS1 GTPase Era OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=era PE=3 SV=1
Length = 299
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 90/165 (54%), Gaps = 11/165 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS + IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFISIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTQEDAQIIFLDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D +RV A + ++ + +M + +V+ + D ++ +++ +
Sbjct: 63 G--IHKPKHKLGDYMMRV--ATNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKTI----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKG 300
K L +NK+DLV +L+ E++K + I S L+G
Sbjct: 114 -KTPVFLVLNKIDLV-HPDELMPRIEKYKKYMDFTEIVPISALEG 156
>sp|Q5HNY0|ERA_STAEQ GTPase Era OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=era PE=3 SV=1
Length = 299
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 11/175 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G ++K + D +RV A + ++ + +M + +V+ + D ++ +++ +
Sbjct: 63 G--IHKPKHKLGDYMMRV--AKNTLSEIDAIMFMVNVNEDIGRGDEYIMEMLKNV----- 113
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
K L +NK+DLV + K+ EQ++ + I S L+G + L
Sbjct: 114 -KTPIFLVLNKIDLVHPDTLMPKI-EQYQSYMDFTDIIPISALEGLNVDHFIDVL 166
>sp|A8EXI4|ERA_RICCK GTPase Era OS=Rickettsia canadensis (strain McKiel) GN=era PE=3
SV=1
Length = 295
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 92/179 (51%), Gaps = 12/179 (6%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++DTPG
Sbjct: 6 QKTVSVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILYDTPG 65
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ K K V AWS+++ +++M++ D + + + K
Sbjct: 66 IFEPKGTLE----KAMVRCAWSSLHSADLVMLIIDSLKPFDDVTHNI------LDKLCSL 115
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQFK 315
V +NK+++ +K + LK H P +F S L G + L +Y+ + K
Sbjct: 116 NIVPVFLLNKIEIESKYLNNLKAFLTENH-PD-SLLFPISALSGKNIDRLLEYITSKAK 172
>sp|Q4UKB0|ERA_RICFE GTPase Era OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
GN=era PE=3 SV=1
Length = 293
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 12/174 (6%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QK+++ IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++DTPG
Sbjct: 4 QKTISFCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILYDTPG 63
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ K K V AWS+++ +++M++ D + P V+ I + K
Sbjct: 64 IFEPKGTLE----KAMVRCAWSSLHSADLVMLIIDSLK----PFDDVMHDI--LDKLRSL 113
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ +NK+D+ +K D +K H P +F S L G + L +Y+
Sbjct: 114 NIVPIFLLNKIDIESKYLDDIKAFLTENH-PD-SLLFPISALSGKNIDGLLEYI 165
>sp|C0QT02|DER_PERMH GTPase Der OS=Persephonella marina (strain DSM 14350 / EX-H1)
GN=der PE=3 SV=1
Length = 447
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 15/209 (7%)
Query: 113 LAKALLQAALERQEEEEEEVKEEDQKS--VAVGIIGAPNAGKSSIINYMVGTKVAAVSRK 170
L A++Q E + E +EV E+++KS + V I+G PNAGKSS++N ++G + A VS
Sbjct: 154 LLDAVVQDIPEYEREASKEVGEKEEKSDVIKVAIVGKPNAGKSSLLNAILGEERAVVSEI 213
Query: 171 TNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVF 230
TT V + D + DT GL KS + + A+ +V++ V
Sbjct: 214 PGTTRDVVDTLFEWKDQKFLFLDTAGLR-KKSKVDYGIEFFSIGRTLDAIKKADVIVHVI 272
Query: 231 DVHRHLTSPDSRVIRLIERMGKQAPPKQKRVLCMNKVDLVTKKKDLL-----KVAEQFKH 285
D + T D+++ LI++ K A V+ +NK+D V K ++L +V E+
Sbjct: 273 DAQQGATEQDTKIAHLIQKYTKPA------VIVINKIDTVPPKSEVLNRIKNQVRERLYF 326
Query: 286 LPGYERIFMTSGLKGAGLKALTQYLMEQF 314
+P Y I MTS G+K L + + + +
Sbjct: 327 IP-YAPIVMTSAKNRKGIKQLLKEITDVY 354
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 14/171 (8%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKSS+ N ++G + A V T ++ + DT G + +
Sbjct: 4 VAIVGRPNVGKSSLFNRIIGKRKAIVEDIPGVTRDRIVSTAEWRGVTFEVVDTGGYIESD 63
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPPKQKRV 261
++ ++E + L + ++V D LT D + R++ R K
Sbjct: 64 KDTFAPYIRKQIE---KELELSDAFILVVDGKEGLTPADKEIARILHRTDKPV------Y 114
Query: 262 LCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLME 312
+ +NK+D ++ K +F L G+E++F S ++ G+ L +++
Sbjct: 115 VAVNKID----NPEMEKAIYEFYEL-GFEKVFPVSSIQKYGVADLLDAVVQ 160
>sp|Q831T9|ERA_ENTFA GTPase Era OS=Enterococcus faecalis (strain ATCC 700802 / V583)
GN=era PE=3 SV=1
Length = 300
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V I+G PN GKS+++N +VG K+A +S K TT +++ G+ T + QI DTP
Sbjct: 4 EHKSGFVAIVGRPNVGKSTLLNRIVGQKIAIMSDKAQTTRNKIQGIYTIPEAQIVFIDTP 63
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAP 255
G+ K H+ VESA++A+ + + + + D + IER+
Sbjct: 64 GIHKPK----HRLGDFMVESAYNAMREVDATLFMVSADQKRGKGDDFI---IERLKNNNS 116
Query: 256 PKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYLMEQF 314
P L +NK+D V DLL + E + ++ I S +G + L L+EQ
Sbjct: 117 P---VYLIINKIDKV-HPDDLLSIIEDYSKQMDFKEIIPISATEGNNFEHLMDVLVEQM 171
>sp|Q9ZE30|ERA_RICPR GTPase Era OS=Rickettsia prowazekii (strain Madrid E) GN=era PE=3
SV=1
Length = 295
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 92/174 (52%), Gaps = 12/174 (6%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QK+++V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQI ++DTPG
Sbjct: 6 QKTISVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIVTLKDTQIILYDTPG 65
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTSPDSRVIRLIERMGKQAPP 256
+ K K V AWS+V ++++ + D + L + ++ + P
Sbjct: 66 IFEPKGMLE----KAMVRCAWSSVYSADLVLSIIDSLKPLDNIAHNILNQFCLLN-IVP- 119
Query: 257 KQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKALTQYL 310
+ +NK+D+ +K + +K + H P +F S L G + L +Y+
Sbjct: 120 ----IFLLNKIDIESKYLNDIKAFLKITH-PK-SLLFPISALLGKNVDVLLEYI 167
>sp|Q7MHN9|ERA_VIBVY GTPase Era OS=Vibrio vulnificus (strain YJ016) GN=era PE=3 SV=1
Length = 320
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 128 EEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADT 187
E++ E+Q + I+G PN GKS+++N ++G K++ SRK TT H ++GV T D
Sbjct: 15 EKKSTSSENQHCGFIAIVGRPNVGKSTLLNKILGQKISITSRKPQTTRHRIMGVDTDGDY 74
Query: 188 QICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH-RHLTSPDSRVIRL 246
Q DTPGL + + ++ + S+ S VNL V F V H T+ D V
Sbjct: 75 QAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNL-----VFFLVDGTHWTNDDEMV--- 126
Query: 247 IERMGKQAPPKQKRVLCMNKVDLVTKKKDLLKVAEQFKHLPGYERIFMTSGLKGAGLKAL 306
+ ++ K P VLC+NKVD V + ++++ + + + S +G + L
Sbjct: 127 LNKLQKANFPV---VLCVNKVDNVQDRNEVMQHMMEMSKKMNFVDVVPISAKQGKNIDVL 183
Query: 307 TQYLMEQF 314
+++ +
Sbjct: 184 RKHVRDHL 191
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,485,647
Number of Sequences: 539616
Number of extensions: 4998805
Number of successful extensions: 47189
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1879
Number of HSP's successfully gapped in prelim test: 1349
Number of HSP's that attempted gapping in prelim test: 39072
Number of HSP's gapped (non-prelim): 6965
length of query: 322
length of database: 191,569,459
effective HSP length: 117
effective length of query: 205
effective length of database: 128,434,387
effective search space: 26329049335
effective search space used: 26329049335
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)