BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020715
(322 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q04471|YM04_YEAST Uncharacterized protein YMR114C OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YMR114C PE=1 SV=1
Length = 368
Score = 114 bits (285), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 141/275 (51%), Gaps = 33/275 (12%)
Query: 7 FNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYD 66
FNAR E++ E + R K RC + G++EWK G KK PY++ +DGR + A +YD
Sbjct: 101 FNARLENLQESKMWMRPCEKKRCAVLMSGYFEWKTVGKKKTPYFISRRDGRLMFVAGMYD 160
Query: 67 TWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILG-DKESSDAWLNGS----SSSKYDT 121
E + LYTFTI+T L+WLH+RMP +L ES DAW++ S+ +
Sbjct: 161 Y---VEKDDLYTFTIITAQGPRELEWLHERMPCVLEPGTESWDAWMDVDKTTWSTEELVK 217
Query: 122 ILKP-YEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESK 180
+LKP Y+ES L +Y VT +GK + G IK PL E S+ F K K+E +
Sbjct: 218 LLKPDYDESKLQFYQVTDDVGKTTNTGERLIK--PLLKED----SDMFSVKREKEEALLE 271
Query: 181 MDEKSSFD-ESVKTNLPKRMKGEPI----KEIKEEPVSGLEEKYSFDTTAQTNLPKSVKD 235
D + D VK + K +KGE + K +K GL++ + +T LP +
Sbjct: 272 NDNEQGIDNRGVKGD--KSLKGEDVFNQKKSLKRNSYDGLKKN---EEQEETTLP----E 322
Query: 236 EAVTADDIRTQ----SSVEKGDPDTKSVASVLSDE 266
E D ++ + S +G+ + +++ ++L ++
Sbjct: 323 EGSIGDRVKREEANLSPKREGNREKRNIVNMLGNQ 357
>sp|Q6P7N4|CC037_XENTR UPF0361 protein C3orf37 homolog OS=Xenopus tropicalis
GN=TGas027m07.1 PE=2 SV=1
Length = 335
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 97/183 (53%), Gaps = 23/183 (12%)
Query: 3 SALQF---NARSESVTEKASFRRLLPKS-RCLAAVEGFYEWKKDGSKKQPYYVHF----- 53
S +Q+ N RS+++TEKA ++ L K RC+ +GFYEW++ S+KQPYY++F
Sbjct: 90 SKMQYKTNNCRSDTMTEKALYKASLFKGKRCVVLADGFYEWQRQNSEKQPYYIYFPQIKA 149
Query: 54 ------------KDGRPLVFAALYDTWQS-SEGEILYTFTILTTSSSAALQWLHDRMPVI 100
R L A L+D W+ + GE LY++T++T SS + W+HDRMP I
Sbjct: 150 EKSPAEQDITDWNGQRLLTMAGLFDCWEPPNGGETLYSYTVITVDSSKTMNWIHDRMPAI 209
Query: 101 LGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEG 160
L E+ WL+ D + + ++ ++PV+ + + PEC+ I L T+
Sbjct: 210 LDGDEAVRKWLDFGEVPTKDALKLIHPIENITYHPVSTVVNNSRNNTPECMAAIIL-TQK 268
Query: 161 KNP 163
K P
Sbjct: 269 KGP 271
>sp|O64131|YOQW_BPSPB UPF0361 protein yoqW OS=Bacillus phage SPbeta GN=yoqW PE=3 SV=1
Length = 224
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 84/150 (56%), Gaps = 4/150 (2%)
Query: 6 QFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKK-DGSKKQPYYVHFKDGRPLVFAAL 64
NAR+E+++EK SFR+ L RC+ + FYEWK+ D K P + K FA L
Sbjct: 74 MINARAETLSEKPSFRKPLVSKRCIIPADSFYEWKRLDPKTKIPMRIKLKSSNLFAFAGL 133
Query: 65 YDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLN--GSSSSKYDTI 122
Y+ W + EG LYT TI+TT + ++ +HDRMPVIL D E+ WLN + ++
Sbjct: 134 YEKWNTPEGNPLYTCTIITTKPNELMEDIHDRMPVILTD-ENEKEWLNPKNTDPDYLQSL 192
Query: 123 LKPYEESDLVWYPVTPAMGKLSFDGPECIK 152
L+PY+ D+ Y V+ + + PE I+
Sbjct: 193 LQPYDADDMEAYQVSSLVNSPKNNSPELIE 222
>sp|O31916|YOQW_BACSU UPF0361 protein YoqW OS=Bacillus subtilis (strain 168) GN=yoqW PE=3
SV=1
Length = 224
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 84/150 (56%), Gaps = 4/150 (2%)
Query: 6 QFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKK-DGSKKQPYYVHFKDGRPLVFAAL 64
NAR+E+++EK SFR+ L RC+ + FYEWK+ D K P + K FA L
Sbjct: 74 MINARAETLSEKPSFRKPLVSKRCIIPADSFYEWKRLDPKTKIPMRIKLKSSNLFAFAGL 133
Query: 65 YDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLN--GSSSSKYDTI 122
Y+ W + EG LYT TI+TT + ++ +HDRMPVIL D E+ WLN + ++
Sbjct: 134 YEKWNTPEGNPLYTCTIITTKPNELMEDIHDRMPVILTD-ENEKEWLNPKNTDPDYLQSL 192
Query: 123 LKPYEESDLVWYPVTPAMGKLSFDGPECIK 152
L+PY+ D+ Y V+ + + PE I+
Sbjct: 193 LQPYDADDMEAYQVSSLVNSPKNNSPELIE 222
>sp|Q6IND6|CC037_XENLA UPF0361 protein C3orf37 homolog OS=Xenopus laevis PE=2 SV=1
Length = 336
Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 91/175 (52%), Gaps = 20/175 (11%)
Query: 8 NARSESVTEKASFRRLLPKSR-CLAAVEGFYEWKKDGSKKQPYYVHF------------- 53
N RS+++TEKA ++ L K R C+ +GFYEWK+ +KQPYY++F
Sbjct: 98 NCRSDTITEKALYKAPLFKGRRCVVLADGFYEWKRQDGEKQPYYIYFPQIKSEKFPEEQD 157
Query: 54 ----KDGRPLVFAALYDTWQS-SEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSD 108
R L A L+D W+ S GE LY++T++T SS + +HDRMP IL E+
Sbjct: 158 MMDWNGQRLLTMAGLFDCWEPPSGGEPLYSYTVITVDSSKTMNCIHDRMPAILDGDEAIR 217
Query: 109 AWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPLKTEGKNP 163
WL+ S D + + ++ ++PV+ + + ECI + L T+ K P
Sbjct: 218 KWLDFGEVSTQDALKLIHPIENITYHPVSTVVNNSRNNSTECIAAVIL-TQKKGP 271
>sp|O34915|YOBE_BACSU UPF0361 protein YobE OS=Bacillus subtilis (strain 168) GN=yobE PE=3
SV=1
Length = 219
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
Query: 6 QFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKK-DGSKKQPYYVHFKDGRPLVFAAL 64
NAR+E++ EK SFR+ L RC+ + FYEWK+ D K P + K FA L
Sbjct: 74 MINARAETLAEKPSFRKPLGSKRCIIPADSFYEWKRLDPKTKIPMRIKLKSSNLFAFAGL 133
Query: 65 YDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLN--GSSSSKYDTI 122
Y+ W + EG +LYT TI+T S ++ +HDRMPVIL D E+ WLN + ++
Sbjct: 134 YEKWNTLEGNLLYTCTIITIKPSELMEDIHDRMPVILTD-ENKKEWLNPKNTDPDYLQSL 192
Query: 123 LKPYEESDLVWYPVT 137
L PY+ D+ Y V+
Sbjct: 193 LLPYDADDMEAYQVS 207
>sp|O34906|YOAM_BACSU UPF0361 protein YoaM OS=Bacillus subtilis (strain 168) GN=yoaM PE=3
SV=1
Length = 227
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
Query: 6 QFNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKK-DGSKKQPYYVHFKDGRPLVFAAL 64
NAR+E++TEK +FRR L RC+ + FYEWK+ D K P + K FA L
Sbjct: 74 MINARAETITEKPAFRRPLVSKRCIIPADSFYEWKRLDSKTKIPMRIKLKSSALFAFAGL 133
Query: 65 YDTWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLN--GSSSSKYDTI 122
Y+ W + +G LYT TI+TT + ++ +HDRMPVIL + WLN +S ++
Sbjct: 134 YEKWSTHQGYPLYTCTIITTEPNEFMKDIHDRMPVILAHDHEKE-WLNPKNTSPDYLQSL 192
Query: 123 LKPYEESDLVWYPVT 137
L PY+ D+ Y V+
Sbjct: 193 LLPYDADDMEAYQVS 207
>sp|Q5ZJT1|CC037_CHICK UPF0361 protein C3orf37 homolog OS=Gallus gallus GN=RCJMB04_15p13
PE=2 SV=1
Length = 336
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 27/179 (15%)
Query: 3 SALQF---NARSESVTEKASFRR-LLPKSRCLAAVEGFYEWKKDGSKKQPYYVHF----- 53
S +QF N RS+++ K+S++ LL RC+ +GFYEW++ G KQPY+++F
Sbjct: 88 SKMQFKTSNCRSDTMLSKSSYKGPLLKGKRCVVLADGFYEWQQRGGGKQPYFIYFPQNKK 147
Query: 54 -------------KDGRPLVFAALYDTWQSSE-GEILYTFTILTTSSSAALQWLHDRMPV 99
+ R L A ++D W+ + GE LYT+TI+T +S + ++H RMP
Sbjct: 148 HPAEEEEDSDEEWRGWRLLTMAGIFDCWEPPKGGEPLYTYTIITVDASEDVSFIHHRMPA 207
Query: 100 ILGDKESSDAWLNGSSSSKYDT--ILKPYEESDLVWYPVTPAMGKLSFDGPECIKEIPL 156
IL E+ + WL+ + + +++P E ++ ++PV+ + + D PEC+ I L
Sbjct: 208 ILDGDEAIEKWLDFAEVPTREAMKLIRPAE--NIAFHPVSTFVNSVRNDTPECLVPIEL 264
>sp|Q8R1M0|CC037_MOUSE UPF0361 protein C3orf37 homolog OS=Mus musculus PE=2 SV=1
Length = 353
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 92/179 (51%), Gaps = 30/179 (16%)
Query: 3 SALQFN---ARSESVTEKASFRRLLPKSR-CLAAVEGFYEWKK--DGSKKQPYYVHF--- 53
S LQFN RS+++ EK SF+ L K R C+ +GFYEW++ +++QPY+++F
Sbjct: 88 SKLQFNTTNCRSDTIMEKQSFKVPLGKGRRCVVLADGFYEWQRCQGTNQRQPYFIYFPQI 147
Query: 54 ---KDG------------------RPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQW 92
K G R L A ++D W++ GE LY+++I+T S L
Sbjct: 148 KTEKSGGNDASDSSDNKEKVWDNWRLLTMAGIFDCWEAPGGECLYSYSIITVDSCRGLSD 207
Query: 93 LHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECI 151
+H RMP IL +E+ WL+ + + + + ++ ++PV+P + + PEC+
Sbjct: 208 IHSRMPAILDGEEAVSKWLDFGEVATQEALKLIHPIDNITFHPVSPVVNNSRNNTPECL 266
>sp|Q5XIJ1|CC037_RAT UPF0361 protein C3orf37 homolog OS=Rattus norvegicus PE=2 SV=1
Length = 353
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 30/179 (16%)
Query: 3 SALQFN---ARSESVTEKASFRRLLPKSR-CLAAVEGFYEWKK--DGSKKQPYYVHF--- 53
S LQFN RS+++ EK SF+ L K R C+ +GFYEW++ +++QPY+++F
Sbjct: 88 SKLQFNTSNCRSDTIMEKQSFKAPLGKGRRCVVLADGFYEWQRCQGTNQRQPYFIYFPQS 147
Query: 54 ---KDG------------------RPLVFAALYDTWQSSEGEILYTFTILTTSSSAALQW 92
K G R L A ++D W+ +GE LY+++I+T S L
Sbjct: 148 KTEKSGENSGSDSLNNKEEVWDNWRLLTMAGIFDCWEPPKGERLYSYSIITVDSCRGLSD 207
Query: 93 LHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECI 151
+H RMP IL +E+ WL+ S + + + ++ ++PV+P + + PEC+
Sbjct: 208 IHSRMPAILDGEEAVSKWLDFGEVSTQEALKLIHPIDNITFHPVSPVVNNSRNNTPECL 266
>sp|Q96FZ2|CC037_HUMAN UPF0361 protein C3orf37 OS=Homo sapiens GN=C3orf37 PE=1 SV=1
Length = 354
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 31/185 (16%)
Query: 3 SALQFN---ARSESVTEKASFRRLLPKSR-CLAAVEGFYEWKK--DGSKKQPYYVHF--- 53
S LQFN RS++V EK SF+ L K R C+ +GFYEW++ +++QPY+++F
Sbjct: 88 SKLQFNTTNCRSDTVMEKRSFKVPLGKGRRCVVLADGFYEWQRCQGTNQRQPYFIYFPQI 147
Query: 54 ---KDG------------------RPLVFAALYDTWQSSEG-EILYTFTILTTSSSAALQ 91
K G R L A ++D W+ EG ++LY++TI+T S L
Sbjct: 148 KTEKSGSIGAADSPENWEKVWDNWRLLTMAGIFDCWEPPEGGDVLYSYTIITVDSCKGLS 207
Query: 92 WLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECI 151
+H RMP IL +E+ WL+ S + + + ++ ++ V+ + + PEC+
Sbjct: 208 DIHHRMPAILDGEEAVSKWLDFGEVSTQEALKLIHPTENITFHAVSSVVNNSRNNTPECL 267
Query: 152 KEIPL 156
+ L
Sbjct: 268 APVDL 272
>sp|Q5NVR0|CC037_PONAB UPF0361 protein C3orf37 homolog OS=Pongo abelii PE=2 SV=1
Length = 354
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 31/185 (16%)
Query: 3 SALQFN---ARSESVTEKASFRRLLPKSR-CLAAVEGFYEWKK--DGSKKQPYYVHF--- 53
S LQFN R++++ EK SF+ L K R C+ +GFYEW++ +++QPY+++F
Sbjct: 88 SKLQFNTTNCRNDTIMEKRSFKVPLGKGRRCVVLADGFYEWQRCQGTNQRQPYFIYFPQI 147
Query: 54 ---KDG------------------RPLVFAALYDTWQSSEG-EILYTFTILTTSSSAALQ 91
K G R L A ++D W+ EG ++LY++TI+T S L
Sbjct: 148 KTEKSGSIGAADSPENWGKVWDNWRLLTMAGIFDCWEPPEGGDVLYSYTIITVDSCKGLS 207
Query: 92 WLHDRMPVILGDKESSDAWLNGSSSSKYDTILKPYEESDLVWYPVTPAMGKLSFDGPECI 151
+H RMP IL +E+ WL+ S + + + ++ ++ V+ + + PEC+
Sbjct: 208 DIHHRMPAILDGEEAVSKWLDFGKVSTQEALKLIHPTENITFHAVSSVVNNSRNNTPECL 267
Query: 152 KEIPL 156
+ L
Sbjct: 268 APVDL 272
>sp|P76318|YEDK_ECOLI Uncharacterized protein YedK OS=Escherichia coli (strain K12)
GN=yedK PE=1 SV=2
Length = 222
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 5/151 (3%)
Query: 7 FNARSESVTEKASFRRLLPKSRCLAAVEGFYEWKKDGSKKQPYYVHFKDGRPLVFAALYD 66
NAR E+ F+ L R + +G++EWKK+G KKQP++++ DG+P+ AA+
Sbjct: 74 INARVETAATSRMFKPLWQHGRAICFADGWFEWKKEGDKKQPFFIYRADGQPIFMAAIGS 133
Query: 67 TWQSSEGEILYTFTILTTSSSAALQWLHDRMPVILGDKESSDAWLNGSSSSKYDTILKP- 125
T G+ F I+T ++ L +HDR P++L E++ W+ S K + +
Sbjct: 134 T-PFERGDEAEGFLIVTAAADQGLVDIHDRRPLVL-SPEAAREWMRQEISGKEASEIAAS 191
Query: 126 --YEESDLVWYPVTPAMGKLSFDGPECIKEI 154
+ W+PV+ A+G + G E I+ +
Sbjct: 192 GCVPANQFSWHPVSRAVGNVKNQGAELIQPV 222
>sp|B8F3E3|SYM_HAEPS Methionine--tRNA ligase OS=Haemophilus parasuis serovar 5 (strain
SH0165) GN=metG PE=3 SV=1
Length = 684
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 28/201 (13%)
Query: 89 ALQWLHDRMPVILGDKESSDAWLNGSSSSKYDT--ILKPYEESDLVWYPVTPAMGK---- 142
A +++ D+ P ++ +E +DA L S + +L Y + PV P + +
Sbjct: 450 ANKYIDDKAPWVIAKEEGTDAELQAVCSMGLELFRVLMSYLK------PVLPKLAERAEA 503
Query: 143 -----LSFDGPECIKEIPLKTEGKNPISNFFLKKEIKKEQESKMDE-KSSFDESVKTNLP 196
L +D PL P + F + E KK+ ++ ++E K+ F ESVK
Sbjct: 504 FLQTELRWDNIGS----PLFAHSIAPFKSLFSRLE-KKQIDAVIEETKALFAESVKAETA 558
Query: 197 KRMKGEPIKEIKEEPVSGLEEKYSFDTTAQTNL--PKSVKDEAVTADDIRTQSSVEKGDP 254
K+ K E K EP++ + + D A+ +L K +K EAV D + ++ GD
Sbjct: 559 KKGKEMTACETKVEPIA---PEITIDDFAKLDLRVAKVLKCEAVPKSDKLLRFELDLGDH 615
Query: 255 DTKSVASVLSDEDTKKELQKR 275
+ + + + +EL+ R
Sbjct: 616 TRQVFSGIKAAYSQPEELEGR 636
>sp|Q92JF7|SCA2_RICCN Putative surface cell antigen sca2 OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=sca2 PE=3 SV=1
Length = 1795
Score = 32.3 bits (72), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 15/163 (9%)
Query: 146 DGPECIKEIPLKT-----EGKNPISNFFLKKEIKKEQESKMD--EKSSFDESVKTNLPKR 198
D + IK I L + E K PI F K E+ +E + K + ++ F N +
Sbjct: 866 DTDDAIKRILLSSCKISEELKRPIKLEFNKSELIRELQGKQNPFKQLEFAYINTKNFDQD 925
Query: 199 MKGEPIKEIKEEP-VSGLEEKYSFDTTAQTNLPKSVKDEAVTA--DDIRTQSSVEKGDPD 255
+ G I E+ P + + ++ +F T TNL K++ + A DD+RT ++
Sbjct: 926 IFGNRIDELINNPNILTIVQQATFLTKEDTNLRKTINSDQAQAKLDDLRT--AILSTIKI 983
Query: 256 TKSVASVLSDEDTKKELQKRD---YKEFLADSKPVIDGNNKLE 295
+ + + L D ++++D KEFL + + GNN L+
Sbjct: 984 EELITANLPQHDFIAIVKEKDPELLKEFLKATTLTVTGNNNLD 1026
>sp|P00780|SUBT_BACLI Subtilisin Carlsberg OS=Bacillus licheniformis GN=apr PE=1 SV=1
Length = 379
Score = 31.6 bits (70), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 169 LKKEIKKEQESKMDEKSSFDESVKTNLPKRMKGEPIKEIKEEP-VSGLEEKYSFDTTAQT 227
+KK+I KE K+D++ + K L K E +KE+K +P V+ +EE + AQT
Sbjct: 53 VKKDIIKESGGKVDKQFRIINAAKAKLDK----EALKEVKNDPDVAYVEEDHVAHALAQT 108
Query: 228 NLPKSVKDEAVTADDIRTQ 246
+P + + AD ++ Q
Sbjct: 109 -VPYGI--PLIKADKVQAQ 124
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.128 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 124,436,424
Number of Sequences: 539616
Number of extensions: 5462382
Number of successful extensions: 17761
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 269
Number of HSP's that attempted gapping in prelim test: 17076
Number of HSP's gapped (non-prelim): 739
length of query: 322
length of database: 191,569,459
effective HSP length: 117
effective length of query: 205
effective length of database: 128,434,387
effective search space: 26329049335
effective search space used: 26329049335
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)