BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 020717
         (322 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|A2APV2|FMNL2_MOUSE Formin-like protein 2 OS=Mus musculus GN=Fmnl2 PE=2 SV=2
          Length = 1086

 Score = 34.7 bits (78), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 11/173 (6%)

Query: 87  NDNFNLDSLLSISEVLCLFSSSVIAIGFAVY----YGMFGLKSSLFGL--IGSRVLACGV 140
           N++ N+D +++  + + +   SV  + F V+    +   GL   L  L    S  L   +
Sbjct: 309 NEDNNIDFMVASMQFINIVVHSVEDMNFRVHLQYEFTKLGLDEYLDKLKHTESDKLQVQI 368

Query: 141 VSLVCGVW-IGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSSATILRVLSR 199
            + +  V+ +GA++   + +    E  R E  E  N+    EKL++    + + +  L +
Sbjct: 369 QAYLDNVFDVGALLEDAETKNAALE--RVEELEE-NISHLSEKLQDTENEAMSKIVELEK 425

Query: 200 QLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQK 252
           QL +      V R+  KD  TQ   L +   E   A+  Q   LEK++ E++K
Sbjct: 426 QLMQRNKELDVVREIYKDANTQVHTLRKMVKEKEEAIQRQS-TLEKKIHELEK 477


>sp|P70194|CLC4F_MOUSE C-type lectin domain family 4 member F OS=Mus musculus GN=Clec4f
           PE=1 SV=1
          Length = 548

 Score = 34.3 bits (77), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 12/155 (7%)

Query: 167 RAEGRESVNLVGRIEKLEEDMKSSATILRVLSRQLEK---LGVRFRVTRKALKDPITQAA 223
           +AE + + +L  RIE +   MK ++  L+ L R L     L    ++ +  L+   T+  
Sbjct: 306 KAELKSTSSLNSRIEVVNGQMKDASRELQTLRRDLSDVSALKSNVQMLQSNLQRAKTEMQ 365

Query: 224 ALAQKNSEATRALAMQGDVLEKELGEIQKVLLAMQEQQQKQLELILAIGKTGKLFENR-- 281
            L + + +AT+AL  +    +  LG +Q+ + A +++Q+ Q +++  I +  K F     
Sbjct: 366 TL-KADLQATKALTAKIQGEQNRLGALQEAVAAQKQEQKTQNQVLQLIAQNWKYFNGNFY 424

Query: 282 -----QEPSQEQDKLKTSDFIDGAKQMETQETEAF 311
                ++P +E +K  TS     A  + +QE +AF
Sbjct: 425 YFSRDKKPWREAEKFCTSQGAHLAS-VTSQEEQAF 458


>sp|Q96PY5|FMNL2_HUMAN Formin-like protein 2 OS=Homo sapiens GN=FMNL2 PE=1 SV=3
          Length = 1086

 Score = 34.3 bits (77), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 11/173 (6%)

Query: 87  NDNFNLDSLLSISEVLCLFSSSVIAIGFAVY----YGMFGLKSSLFGL--IGSRVLACGV 140
           N++ N+D +++  + + +   SV  + F V+    +   GL   L  L    S  L   +
Sbjct: 309 NEDNNIDFMVASMQFINIVVHSVEDMNFRVHLQYEFTKLGLDEYLDKLKHTESDKLQVQI 368

Query: 141 VSLVCGVW-IGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSSATILRVLSR 199
            + +  V+ +GA++   + +    E  R E  E  N+    EKL++    + + +  L +
Sbjct: 369 QAYLDNVFDVGALLEDAETKNAALE--RVEELEE-NISHLSEKLQDTENEAMSKIVELEK 425

Query: 200 QLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQK 252
           QL +      V R+  KD  TQ   L +   E   A+  Q   LEK++ E++K
Sbjct: 426 QLMQRNKELDVVREIYKDANTQVHTLRKMVKEKEEAIQRQS-TLEKKIHELEK 477


>sp|Q6F3J0|NFKB1_CANFA Nuclear factor NF-kappa-B p105 subunit OS=Canis familiaris GN=NFKB1
           PE=2 SV=2
          Length = 972

 Score = 32.3 bits (72), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 10/153 (6%)

Query: 121 FGLKSSLFGLIGSRVLACGVVSLVCGVWIGAI-IRRRQWRRVCGEKARAEGRESVNLVGR 179
           +G     F   G      G      G+  G I    +     CG+      RE+VNL G+
Sbjct: 404 YGFPHYGFPTYGGITFHPGTTKSNAGMKHGTIDTPSKNDSEGCGKNVD---REAVNLSGK 460

Query: 180 I-EKLEEDMKSSATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAM 238
           + E  E+D +SS  +  V       +G++   +R      + +A  LA++++ A    A+
Sbjct: 461 VTEPTEQDKESSMGVDEVTLTY--TVGIKEENSRFQDNLFLEKAMQLAKRHANALFDYAV 518

Query: 239 QGDVLEKELGEIQKVLLAMQEQQQKQLELILAI 271
            GDV  K L  +Q+ L A+Q++    + L LAI
Sbjct: 519 TGDV--KMLLAVQRHLTAVQDENGDSV-LHLAI 548


>sp|A2R3Z3|MDV1_ASPNC Mitochondrial division protein 1 OS=Aspergillus niger (strain CBS
           513.88 / FGSC A1513) GN=mdv1 PE=3 SV=2
          Length = 657

 Score = 32.0 bits (71), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)

Query: 196 VLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNS---EATRALAMQGDVLEKELGEIQK 252
           +LSR++E +GVR  +    + D   + A L        +    L M+   LE EL EI+ 
Sbjct: 176 LLSRRMELMGVRKNMCSSEIHDIDNKIANLHNMRKIVLDRLAGLEMEEADLEHELNEIEN 235

Query: 253 VLLAMQEQQQK 263
            L  +QE+QQ+
Sbjct: 236 KLEDIQEEQQE 246


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.131    0.371 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,708,755
Number of Sequences: 539616
Number of extensions: 4150373
Number of successful extensions: 16861
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 147
Number of HSP's that attempted gapping in prelim test: 16696
Number of HSP's gapped (non-prelim): 315
length of query: 322
length of database: 191,569,459
effective HSP length: 117
effective length of query: 205
effective length of database: 128,434,387
effective search space: 26329049335
effective search space used: 26329049335
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)