BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020720
(322 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 229 bits (584), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/273 (43%), Positives = 172/273 (63%), Gaps = 4/273 (1%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTK-EFLTEIDMIWNIRHPNLVQLIGCC 59
++G G FG VY+G L DGT +A+K L E QG + +F TE++MI H NL++L G C
Sbjct: 45 ILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFC 104
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
+ R+LVY Y+ N S+A+ L LDWP R I LG+A GL++LH+ DP I+
Sbjct: 105 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKII 164
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+KA+N+LLD F +GDFGLAKL HV V GT+G++APEY G+ ++K
Sbjct: 165 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKT 224
Query: 180 DVYSFGVLLLEIISGRSSSKAA--FGDDMLILVEWTWKLREEGRLLEIVDPELT-QFPEK 236
DV+ +GV+LLE+I+G+ + A DD ++L++W L +E +L +VD +L + ++
Sbjct: 225 DVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDE 284
Query: 237 EVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKD 269
EV + I+V L CTQ+ RP M +VV ML D
Sbjct: 285 EVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 225 bits (573), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/273 (42%), Positives = 170/273 (62%), Gaps = 4/273 (1%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTK-EFLTEIDMIWNIRHPNLVQLIGCC 59
++G G FG VY+G L DG +A+K L E QG + +F TE++MI H NL++L G C
Sbjct: 37 ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
+ R+LVY Y+ N S+A+ L LDWP R I LG+A GL++LH+ DP I+
Sbjct: 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKII 156
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+KA+N+LLD F +GDFGLAKL HV V G +G++APEY G+ ++K
Sbjct: 157 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKT 216
Query: 180 DVYSFGVLLLEIISGRSSSKAA--FGDDMLILVEWTWKLREEGRLLEIVDPELT-QFPEK 236
DV+ +GV+LLE+I+G+ + A DD ++L++W L +E +L +VD +L + ++
Sbjct: 217 DVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDE 276
Query: 237 EVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKD 269
EV + I+V L CTQ+ RP M +VV ML D
Sbjct: 277 EVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 215 bits (547), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/279 (43%), Positives = 171/279 (61%), Gaps = 5/279 (1%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+IG G FG VY+G LRDG ++A+K + ES QG +EF TEI+ + RHP+LV LIG C
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
E N IL+Y+Y+EN +L L GS +S+ W R IC+G A GL +LH A I+H
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIH 162
Query: 121 RDIKASNVLLDGNFHPKIGDFGLAKLFPD-NVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
RD+K+ N+LLD NF PKI DFG++K + + TH+ V GT+GY+ PEY + G+LT+K+
Sbjct: 163 RDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKS 222
Query: 180 DVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFPEKEVM 239
DVYSFGV+L E++ RS+ + +M+ L EW + G+L +IVDP L E +
Sbjct: 223 DVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESL 282
Query: 240 R-FIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLNEKAL 277
R F + C + RP+M V+ L + L E +
Sbjct: 283 RKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESVI 321
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 214 bits (544), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 121/279 (43%), Positives = 170/279 (60%), Gaps = 5/279 (1%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+IG G FG VY+G LRDG ++A+K + ES QG +EF TEI+ + RHP+LV LIG C
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
E N IL+Y+Y+EN +L L GS +S+ W R IC+G A GL +LH A I+H
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIH 162
Query: 121 RDIKASNVLLDGNFHPKIGDFGLAKLFPD-NVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
RD+K+ N+LLD NF PKI DFG++K + TH+ V GT+GY+ PEY + G+LT+K+
Sbjct: 163 RDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKS 222
Query: 180 DVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFPEKEVM 239
DVYSFGV+L E++ RS+ + +M+ L EW + G+L +IVDP L E +
Sbjct: 223 DVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESL 282
Query: 240 R-FIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLNEKAL 277
R F + C + RP+M V+ L + L E +
Sbjct: 283 RKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQESVI 321
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 151/274 (55%), Gaps = 16/274 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSA----ESKQGTKEFLTEIDMIWNIRHPNLVQLIG 57
+G G FGVVY+G + + T +A+K L+A +++ ++F EI ++ +H NLV+L+G
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ ++ LVY Y+ N SL + L L W R I G A+G++FLHE
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQGAANGINFLHENHH-- 154
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKL---FPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
+HRDIK++N+LLD F KI DFGLA+ F V + +R+ GT Y+APE AL G+
Sbjct: 155 -IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV--MXSRIVGTTAYMAPE-ALRGE 210
Query: 175 LTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFP 234
+T K+D+YSFGV+LLEII+G + + L+L EE + + +D ++
Sbjct: 211 ITPKSDIYSFGVVLLEIITGLPAVD-EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDAD 269
Query: 235 EKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
V V C + RP +K+V ++L +
Sbjct: 270 STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 150/274 (54%), Gaps = 16/274 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSA----ESKQGTKEFLTEIDMIWNIRHPNLVQLIG 57
+G G FGVVY+G + + T +A+K L+A +++ ++F EI ++ +H NLV+L+G
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ ++ LVY Y+ N SL + L L W R I G A+G++FLHE
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQGAANGINFLHENHH-- 154
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKL---FPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
+HRDIK++N+LLD F KI DFGLA+ F V + R+ GT Y+APE AL G+
Sbjct: 155 -IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV--MXXRIVGTTAYMAPE-ALRGE 210
Query: 175 LTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFP 234
+T K+D+YSFGV+LLEII+G + + L+L EE + + +D ++
Sbjct: 211 ITPKSDIYSFGVVLLEIITGLPAVD-EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDAD 269
Query: 235 EKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
V V C + RP +K+V ++L +
Sbjct: 270 STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 144 bits (362), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 150/274 (54%), Gaps = 16/274 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSA----ESKQGTKEFLTEIDMIWNIRHPNLVQLIG 57
+G G FGVVY+G + + T +A+K L+A +++ ++F EI ++ +H NLV+L+G
Sbjct: 33 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ ++ LVY Y+ N SL + L L W R I G A+G++FLHE
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQGAANGINFLHENHH-- 148
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKL---FPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
+HRDIK++N+LLD F KI DFGLA+ F V + R+ GT Y+APE AL G+
Sbjct: 149 -IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV--MXXRIVGTTAYMAPE-ALRGE 204
Query: 175 LTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFP 234
+T K+D+YSFGV+LLEII+G + + L+L EE + + +D ++
Sbjct: 205 ITPKSDIYSFGVVLLEIITGLPAVD-EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDAD 263
Query: 235 EKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
V V C + RP +K+V ++L +
Sbjct: 264 STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 297
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 144/271 (53%), Gaps = 12/271 (4%)
Query: 3 GGGAFGVVYRGSLRDGTQIAIKCLSA----ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
G G FGVVY+G + + T +A+K L+A +++ ++F EI + +H NLV+L+G
Sbjct: 31 GEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
+ ++ LVY Y N SL + L L W R I G A+G++FLHE
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRL-SCLDGTPPLSWHXRCKIAQGAANGINFLHENHH--- 145
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHV-STRVAGTMGYLAPEYALLGQLTK 177
+HRDIK++N+LLD F KI DFGLA+ V +R+ GT Y APE AL G++T
Sbjct: 146 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITP 204
Query: 178 KADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFPEKE 237
K+D+YSFGV+LLEII+G + + L+L EE + + +D +
Sbjct: 205 KSDIYSFGVVLLEIITGLPAVD-EHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDADSTS 263
Query: 238 VMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
V V C + RP +K+V ++L +
Sbjct: 264 VEAXYSVASQCLHEKKNKRPDIKKVQQLLQE 294
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 109/194 (56%), Gaps = 6/194 (3%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTK--EFLTEIDMIWNIRHPNLVQLIGCC 59
IG G+FG V+R G+ +A+K L + + EFL E+ ++ +RHPN+V +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
+ N +V EYL SL L S ++ LD R ++ A G+++LH +PPIV
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGARE-QLDERRRLSMAYDVAKGMNYLHNR-NPPIV 161
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+K+ N+L+D + K+ DFGL++L S AGT ++APE +K+
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFL-XSKXAAGTPEWMAPEVLRDEPSNEKS 220
Query: 180 DVYSFGVLLLEIIS 193
DVYSFGV+L E+ +
Sbjct: 221 DVYSFGVILWELAT 234
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 113/195 (57%), Gaps = 8/195 (4%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTK--EFLTEIDMIWNIRHPNLVQLIGCC 59
IG G+FG V+R G+ +A+K L + + EFL E+ ++ +RHPN+V +G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
+ N +V EYL SL L S ++ LD R ++ A G+++LH +PPIV
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGARE-QLDERRRLSMAYDVAKGMNYLHNR-NPPIV 161
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTR-VAGTMGYLAPEYALLGQLTKK 178
HR++K+ N+L+D + K+ DFGL++L T +S++ AGT ++APE +K
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSNEK 219
Query: 179 ADVYSFGVLLLEIIS 193
+DVYSFGV+L E+ +
Sbjct: 220 SDVYSFGVILWELAT 234
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 116/219 (52%), Gaps = 14/219 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G+ T++AIK L K GT + FL E ++ IRH LVQL
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKIRHEKLVQLYAV 81
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
E+ I V EY+ SL + L G KY+ L P ++ ASG++++
Sbjct: 82 VSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVERMN---Y 135
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
VHRD++A+N+L+ N K+ DFGLA+L DN + + APE AL G+ T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 179 ADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKL 216
+DV+SFG+LL E+ + GR ++L VE +++
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 117/219 (53%), Gaps = 14/219 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G+ T++AIK L K GT + FL E ++ +RH LVQL
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
E+ I++ EY+ SL + L G KY+ L P ++ ASG++++
Sbjct: 82 VSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVERMN---Y 135
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
VHRD++A+N+L+ N K+ DFGLA+L DN + + APE AL G+ T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 179 ADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKL 216
+DV+SFG+LL E+ + GR ++L VE +++
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 113/214 (52%), Gaps = 14/214 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G+ T++AIK L K GT + FL E ++ +RH LVQL
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 71
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
E+ I V EY+ SL + L G KY+ L P ++ ASG++++
Sbjct: 72 VSEEPIXI-VTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERMN---Y 125
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
VHRD++A+N+L+ N K+ DFGLA+L DN + + APE AL G+ T K
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 179 ADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVE 211
+DV+SFG+LL E+ + GR ++L VE
Sbjct: 186 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 219
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 117/219 (53%), Gaps = 14/219 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G+ T++AIK L K GT + FL E ++ +RH LVQL
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
E+ I++ EY+ SL + L G KY+ L P ++ ASG++++
Sbjct: 82 VSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVERMN---Y 135
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
VHRD++A+N+L+ N K+ DFGLA+L DN + + APE AL G+ T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 179 ADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKL 216
+DV+SFG+LL E+ + GR ++L VE +++
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 113/214 (52%), Gaps = 14/214 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G+ T++AIK L K GT + FL E ++ +RH LVQL
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 74
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
E+ I V EY+ SL + L G KY+ L P ++ ASG++++
Sbjct: 75 VSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERMN---Y 128
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
VHRD++A+N+L+ N K+ DFGLA+L DN + + APE AL G+ T K
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 188
Query: 179 ADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVE 211
+DV+SFG+LL E+ + GR ++L VE
Sbjct: 189 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 222
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 113/214 (52%), Gaps = 14/214 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G+ T++AIK L K GT + FL E ++ +RH LVQL
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
E+ I V EY+ SL + L G KY+ L P ++ ASG++++
Sbjct: 79 VSEEPIYI-VTEYMNKGSLLDFLKGETGKYLRL--PQLVDMSAQIASGMAYVERMN---Y 132
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
VHRD++A+N+L+ N K+ DFGLA+L DN + + APE AL G+ T K
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 179 ADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVE 211
+DV+SFG+LL E+ + GR ++L VE
Sbjct: 193 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 226
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 116/219 (52%), Gaps = 14/219 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G+ T++AIK L K GT + FL E ++ +RH LVQL
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
E+ I V EY+ SL + L G KY+ L P ++ ASG++++
Sbjct: 79 VSEEPIYI-VTEYMNKGSLLDFLKGETGKYLRL--PQLVDMSAQIASGMAYVERMN---Y 132
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
VHRD++A+N+L+ N K+ DFGLA+L DN + + APE AL G+ T K
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 179 ADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKL 216
+DV+SFG+LL E+ + GR ++L VE +++
Sbjct: 193 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 231
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 116/219 (52%), Gaps = 14/219 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G+ T++AIK L K GT + FL E ++ +RH LVQL
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 72
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
E+ I V EY+ SL + L G KY+ L P ++ ASG++++
Sbjct: 73 VSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVERMN---Y 126
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
VHRD++A+N+L+ N K+ DFGLA+L DN + + APE AL G+ T K
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 179 ADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKL 216
+DV+SFG+LL E+ + GR ++L VE +++
Sbjct: 187 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 225
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 116/219 (52%), Gaps = 14/219 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G+ T++AIK L K GT + FL E ++ +RH LVQL
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
E+ I V EY+ SL + L G KY+ L P ++ ASG++++
Sbjct: 82 VSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVERMN---Y 135
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
VHRD++A+N+L+ N K+ DFGLA+L DN + + APE AL G+ T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 179 ADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKL 216
+DV+SFG+LL E+ + GR ++L VE +++
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 113/214 (52%), Gaps = 14/214 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G+ T++AIK L K GT + FL E ++ +RH LVQL
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 70
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
E+ I V EY+ SL + L G KY+ L P ++ ASG++++
Sbjct: 71 VSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVERMN---Y 124
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
VHRD++A+N+L+ N K+ DFGLA+L DN + + APE AL G+ T K
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 184
Query: 179 ADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVE 211
+DV+SFG+LL E+ + GR ++L VE
Sbjct: 185 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 218
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 116/219 (52%), Gaps = 14/219 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G+ T++AIK L K GT + FL E ++ +RH LVQL
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
E+ I V EY+ SL + L G KY+ L P ++ ASG++++
Sbjct: 82 VSEEPIYI-VCEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVERMN---Y 135
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
VHRD++A+N+L+ N K+ DFGLA+L DN + + APE AL G+ T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 179 ADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKL 216
+DV+SFG+LL E+ + GR ++L VE +++
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 116/219 (52%), Gaps = 14/219 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G+ T++AIK L K GT + FL E ++ +RH LVQL
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
E+ I V EY+ SL + L G KY+ L P ++ ASG++++
Sbjct: 248 VSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERMN---Y 301
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
VHRD++A+N+L+ N K+ DFGLA+L DN + + APE AL G+ T K
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 179 ADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKL 216
+DV+SFG+LL E+ + GR ++L VE +++
Sbjct: 362 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 400
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 116/219 (52%), Gaps = 14/219 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G+ T++AIK L K GT + FL E ++ +RH LVQL
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
E+ I V EY+ SL + L G KY+ L P ++ ASG++++
Sbjct: 248 VSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERMN---Y 301
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
VHRD++A+N+L+ N K+ DFGLA+L DN + + APE AL G+ T K
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 179 ADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKL 216
+DV+SFG+LL E+ + GR ++L VE +++
Sbjct: 362 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 400
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 116/219 (52%), Gaps = 14/219 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G+ T++AIK L K GT + FL E ++ +RH LVQL
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 330
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
E+ I V EY+ SL + L G KY+ L P ++ ASG++++
Sbjct: 331 VSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERMN---Y 384
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
VHRD++A+N+L+ N K+ DFGLA+L DN + + APE AL G+ T K
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 444
Query: 179 ADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKL 216
+DV+SFG+LL E+ + GR ++L VE +++
Sbjct: 445 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 483
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 116/219 (52%), Gaps = 14/219 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G+ T++AIK L K GT + FL E ++ +RH LVQL
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
E+ I V EY+ SL + L G KY+ L P ++ ASG++++
Sbjct: 248 VSEEPIYI-VGEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERMN---Y 301
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
VHRD++A+N+L+ N K+ DFGLA+L DN + + APE AL G+ T K
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 179 ADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKL 216
+DV+SFG+LL E+ + GR ++L VE +++
Sbjct: 362 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 400
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 115/219 (52%), Gaps = 14/219 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G+ T++AIK L K GT + FL E ++ +RH LVQL
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
E+ I V EY+ SL + L G KY+ L P ++ ASG++++
Sbjct: 82 VSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVERMN---Y 135
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
VHRD+ A+N+L+ N K+ DFGLA+L DN + + APE AL G+ T K
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 179 ADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKL 216
+DV+SFG+LL E+ + GR ++L VE +++
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 115/219 (52%), Gaps = 14/219 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G+ T++AIK L K GT + FL E ++ +RH LVQL
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
E+ I V EY+ L + L G KY+ L P ++ ASG++++
Sbjct: 82 VSEEPIYI-VMEYMSKGCLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVERMN---Y 135
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
VHRD++A+N+L+ N K+ DFGLA+L DN + + APE AL G+ T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 179 ADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKL 216
+DV+SFG+LL E+ + GR ++L VE +++
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 115/219 (52%), Gaps = 14/219 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G+ T++AIK L K GT + FL E ++ +RH LVQL
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL----KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
E+ I V EY+ L + L G KY+ L P ++ ASG++++
Sbjct: 82 VSEEPIYI-VTEYMSKGCLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVERMN---Y 135
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
VHRD++A+N+L+ N K+ DFGLA+L DN + + APE AL G+ T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 179 ADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKL 216
+DV+SFG+LL E+ + GR ++L VE +++
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 234
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 112/216 (51%), Gaps = 8/216 (3%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
+G G FG V+ G+ T++AIK L + FL E ++ +RH LVQL E
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKP-GNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
+ I V EY+ SL + L G KY+ L P ++ ASG++++ VHR
Sbjct: 252 EPIYI-VTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVERMN---YVHR 305
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKADV 181
D++A+N+L+ N K+ DFGL +L DN + + APE AL G+ T K+DV
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 365
Query: 182 YSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKL 216
+SFG+LL E+ + GR ++L VE +++
Sbjct: 366 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 401
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 105/192 (54%), Gaps = 7/192 (3%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G FG+V+ G + ++AIK + E ++F+ E +++ + HP LVQL G C+E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
LV+E++E+ L++ L + + + T +CL G+++L E + ++HR
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAS---VIHR 127
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKADV 181
D+ A N L+ N K+ DFG+ + D+ ST + + +PE + + K+DV
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 182 YSFGVLLLEIIS 193
+SFGVL+ E+ S
Sbjct: 188 WSFGVLMWEVFS 199
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G FG+V+ G + ++AIK + E ++F+ E +++ + HP LVQL G C+E
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
LV+E++E+ L++ L + + + T +CL G+++L E ++HR
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHR 130
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKADV 181
D+ A N L+ N K+ DFG+ + D+ ST + + +PE + + K+DV
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 190
Query: 182 YSFGVLLLEIIS 193
+SFGVL+ E+ S
Sbjct: 191 WSFGVLMWEVFS 202
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G FG+V+ G + ++AIK + E ++F+ E +++ + HP LVQL G C+E
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
LV+E++E+ L++ L + + + T +CL G+++L E ++HR
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHR 125
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKADV 181
D+ A N L+ N K+ DFG+ + D+ ST + + +PE + + K+DV
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 185
Query: 182 YSFGVLLLEIIS 193
+SFGVL+ E+ S
Sbjct: 186 WSFGVLMWEVFS 197
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G FG+V+ G + ++AIK + E ++F+ E +++ + HP LVQL G C+E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
LV+E++E+ L++ L + + + T +CL G+++L E ++HR
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHR 127
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKADV 181
D+ A N L+ N K+ DFG+ + D+ ST + + +PE + + K+DV
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 182 YSFGVLLLEIIS 193
+SFGVL+ E+ S
Sbjct: 188 WSFGVLMWEVFS 199
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 103/192 (53%), Gaps = 7/192 (3%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G FG+V+ G + ++AIK + E +F+ E +++ + HP LVQL G C+E
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
LV+E++E+ L++ L + + + T +CL G+++L E ++HR
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHR 147
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKADV 181
D+ A N L+ N K+ DFG+ + D+ ST + + +PE + + K+DV
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 207
Query: 182 YSFGVLLLEIIS 193
+SFGVL+ E+ S
Sbjct: 208 WSFGVLMWEVFS 219
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 137/271 (50%), Gaps = 30/271 (11%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
++G GAFGVV + R +AIK + +ES++ K F+ E+ + + HPN+V+L G C+
Sbjct: 16 VVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL 72
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANI---CLGTASGLSFLHEEADPP 117
N LV EY E SL N L G++ L + T A+ CL + G+++LH
Sbjct: 73 --NPVCLVMEYAEGGSLYNVLHGAE----PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 126
Query: 118 IVHRDIKASNVLL-DGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRD+K N+LL G KI DFG A D TH+ T G+ ++APE +
Sbjct: 127 LIHRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHM-TNNKGSAAWMAPEVFEGSNYS 182
Query: 177 KKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFPEK 236
+K DV+S+G++L E+I+ R G I+ W + R P L + K
Sbjct: 183 EKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM----WAVHNGTR------PPLIKNLPK 232
Query: 237 EVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
+ + C RP+M+++V++++
Sbjct: 233 PIESLMTR---CWSKDPSQRPSMEEIVKIMT 260
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 137/271 (50%), Gaps = 30/271 (11%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
++G GAFGVV + R +AIK + +ES++ K F+ E+ + + HPN+V+L G C+
Sbjct: 15 VVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL 71
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANI---CLGTASGLSFLHEEADPP 117
N LV EY E SL N L G++ L + T A+ CL + G+++LH
Sbjct: 72 --NPVCLVMEYAEGGSLYNVLHGAE----PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 118 IVHRDIKASNVLL-DGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRD+K N+LL G KI DFG A D TH+ T G+ ++APE +
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHM-TNNKGSAAWMAPEVFEGSNYS 181
Query: 177 KKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFPEK 236
+K DV+S+G++L E+I+ R G I+ W + R P L + K
Sbjct: 182 EKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM----WAVHNGTR------PPLIKNLPK 231
Query: 237 EVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
+ + C RP+M+++V++++
Sbjct: 232 PIESLMTR---CWSKDPSQRPSMEEIVKIMT 259
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 103/192 (53%), Gaps = 7/192 (3%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G FG+V+ G + ++AIK + E ++F+ E +++ + HP LVQL G C+E
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
LV E++E+ L++ L + + + T +CL G+++L E ++HR
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHR 128
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKADV 181
D+ A N L+ N K+ DFG+ + D+ ST + + +PE + + K+DV
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 188
Query: 182 YSFGVLLLEIIS 193
+SFGVL+ E+ S
Sbjct: 189 WSFGVLMWEVFS 200
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 115/219 (52%), Gaps = 14/219 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G+ T++AIK L K GT + FL E ++ ++H LVQL
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTL----KPGTMSPESFLEEAQIMKKLKHDKLVQLYAV 72
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
E+ I V EY+ SL + L + + + L P ++ A+G++++
Sbjct: 73 VSEEPIYI-VTEYMNKGSLLDFLKDGEGRALKL--PNLVDMAAQVAAGMAYIERMN---Y 126
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
+HRD++++N+L+ KI DFGLA+L DN + + APE AL G+ T K
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 179 ADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKL 216
+DV+SFG+LL E+++ GR ++L VE +++
Sbjct: 187 SDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM 225
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 137/281 (48%), Gaps = 39/281 (13%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFL----TEIDMIWNIRHPNLVQLI 56
+IG G FG VYR + G ++A+K + + + + E + ++HPN++ L
Sbjct: 14 IIGIGGFGKVYR-AFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
G C+++ N LV E+ L L G K + D N + A G+++LH+EA
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSG---KRIPPD--ILVNWAVQIARGMNYLHDEAIV 127
Query: 117 PIVHRDIKASNVLL-----DGNFHP---KIGDFGLAKLFPDNVTHVSTRV--AGTMGYLA 166
PI+HRD+K+SN+L+ +G+ KI DFGLA+ + H +T++ AG ++A
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW-----HRTTKMSAAGAYAWMA 182
Query: 167 PEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIV 226
PE +K +DV+S+GVLL E+++G + G + V + ++
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVA----------MNKLA 232
Query: 227 DPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
P + PE F K+ C H RP+ +++ L+
Sbjct: 233 LPIPSTCPEP----FAKLMEDCWNPDPHSRPSFTNILDQLT 269
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 13/195 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G T++A+K L KQG+ FL E +++ ++H LV+L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
++ I+ EY+EN SL + L ++++ ++ A G++F+ E
Sbjct: 83 VTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 136
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
+HRD++A+N+L+ KI DFGLA+L DN + + APE G T K
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 179 ADVYSFGVLLLEIIS 193
+DV+SFG+LL EI++
Sbjct: 197 SDVWSFGILLTEIVT 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 13/195 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G T++A+K L KQG+ FL E +++ ++H LV+L
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 84
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
++ I+ EY+EN SL + L ++++ ++ A G++F+ E
Sbjct: 85 VTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 138
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
+HRD++A+N+L+ KI DFGLA+L DN + + APE G T K
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 198
Query: 179 ADVYSFGVLLLEIIS 193
+DV+SFG+LL EI++
Sbjct: 199 SDVWSFGILLTEIVT 213
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 13/195 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G T++A+K L KQG+ FL E +++ ++H LV+L
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 85
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
++ I+ EY+EN SL + L ++++ ++ A G++F+ E
Sbjct: 86 VTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 139
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
+HRD++A+N+L+ KI DFGLA+L DN + + APE G T K
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 199
Query: 179 ADVYSFGVLLLEIIS 193
+DV+SFG+LL EI++
Sbjct: 200 SDVWSFGILLTEIVT 214
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 13/195 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G T++A+K L KQG+ FL E +++ ++H LV+L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
++ I+ EY+EN SL + L ++++ ++ A G++F+ E
Sbjct: 77 VTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 130
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
+HRD++A+N+L+ KI DFGLA+L DN + + APE G T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 179 ADVYSFGVLLLEIIS 193
+DV+SFG+LL EI++
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 13/195 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G T++A+K L KQG+ FL E +++ ++H LV+L
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 86
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
++ I+ EY+EN SL + L ++++ ++ A G++F+ E
Sbjct: 87 VTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 140
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
+HRD++A+N+L+ KI DFGLA+L DN + + APE G T K
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 200
Query: 179 ADVYSFGVLLLEIIS 193
+DV+SFG+LL EI++
Sbjct: 201 SDVWSFGILLTEIVT 215
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 13/195 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G T++A+K L KQG+ FL E +++ ++H LV+L
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 77
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
++ I+ EY+EN SL + L ++++ ++ A G++F+ E
Sbjct: 78 VTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 131
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
+HRD++A+N+L+ KI DFGLA+L DN + + APE G T K
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 191
Query: 179 ADVYSFGVLLLEIIS 193
+DV+SFG+LL EI++
Sbjct: 192 SDVWSFGILLTEIVT 206
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 13/195 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G T++A+K L KQG+ FL E +++ ++H LV+L
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 78
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
++ I+ EY+EN SL + L ++++ ++ A G++F+ E
Sbjct: 79 VTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 132
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
+HRD++A+N+L+ KI DFGLA+L DN + + APE G T K
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 192
Query: 179 ADVYSFGVLLLEIIS 193
+DV+SFG+LL EI++
Sbjct: 193 SDVWSFGILLTEIVT 207
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 13/195 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G T++A+K L KQG+ FL E +++ ++H LV+L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
++ I+ EY+EN SL + L ++++ ++ A G++F+ E
Sbjct: 77 VTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 130
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
+HRD++A+N+L+ KI DFGLA+L DN + + APE G T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 179 ADVYSFGVLLLEIIS 193
+DV+SFG+LL EI++
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 13/195 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G T++A+K L KQG+ FL E +++ ++H LV+L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 82
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
++ I+ EY+EN SL + L ++++ ++ A G++F+ E
Sbjct: 83 VTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 136
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
+HRD++A+N+L+ KI DFGLA+L DN + + APE G T K
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 179 ADVYSFGVLLLEIIS 193
+DV+SFG+LL EI++
Sbjct: 197 SDVWSFGILLTEIVT 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 13/195 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G T++A+K L KQG+ FL E +++ ++H LV+L
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 81
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
++ I+ EY+EN SL + L ++++ ++ A G++F+ E
Sbjct: 82 VTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 135
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
+HRD++A+N+L+ KI DFGLA+L DN + + APE G T K
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 195
Query: 179 ADVYSFGVLLLEIIS 193
+DV+SFG+LL EI++
Sbjct: 196 SDVWSFGILLTEIVT 210
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 13/195 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKE---FLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G T++A+K L KQG+ FL E +++ ++H LV+L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
++ I+ EY+EN SL + L ++++ ++ A G++F+ E
Sbjct: 77 VTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 130
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
+HRD++A+N+L+ KI DFGLA+L DN + + APE G T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 179 ADVYSFGVLLLEIIS 193
+DV+SFG+LL EI++
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 134/276 (48%), Gaps = 29/276 (10%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ----IAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQL 55
++G G FG V G L+ ++ +AIK L +++ ++FL E ++ HPN+++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G + ++V EY+EN SL + L +++ + + G ASG+ +L +D
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL---VGMLRGIASGMKYL---SD 165
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--YLAPEYALLG 173
VHRD+ A N+L++ N K+ DFGLA++ D+ T G + + +PE
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 174 QLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ T +DV+S+G++L E++S G D++ V+ ++L P
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL-----------PPPMD 274
Query: 233 FPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
P ++ L C Q + RP +Q+V +L K
Sbjct: 275 CPAA----LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%), Gaps = 13/195 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G T++A+K L KQG+ FL E +++ ++H LV+L
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 71
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
++ I+ EY+EN SL + L ++++ ++ A G++F+ E
Sbjct: 72 VTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 125
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
+HRD++A+N+L+ KI DFGLA+L DN + + APE G T K
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 185
Query: 179 ADVYSFGVLLLEIIS 193
+DV+SFG+LL EI++
Sbjct: 186 SDVWSFGILLTEIVT 200
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 134/276 (48%), Gaps = 29/276 (10%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ----IAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQL 55
++G G FG V G L+ ++ +AIK L +++ ++FL E ++ HPN+++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G + ++V EY+EN SL + L +++ + + G ASG+ +L +D
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL---VGMLRGIASGMKYL---SD 165
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--YLAPEYALLG 173
VHRD+ A N+L++ N K+ DFGL+++ D+ T G + + +PE
Sbjct: 166 MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 174 QLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ T +DV+S+G++L E++S G D++ V+ ++L P
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL-----------PPPMD 274
Query: 233 FPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
P ++ L C Q + RP +Q+V +L K
Sbjct: 275 CPAA----LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 134/276 (48%), Gaps = 29/276 (10%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ----IAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQL 55
++G G FG V G L+ ++ +AIK L +++ ++FL E ++ HPN+++L
Sbjct: 50 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 109
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G + ++V EY+EN SL + L +++ + + G ASG+ +L +D
Sbjct: 110 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL---VGMLRGIASGMKYL---SD 163
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--YLAPEYALLG 173
VHRD+ A N+L++ N K+ DFGL+++ D+ T G + + +PE
Sbjct: 164 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 223
Query: 174 QLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ T +DV+S+G++L E++S G D++ V+ ++L P
Sbjct: 224 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL-----------PPPMD 272
Query: 233 FPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
P ++ L C Q + RP +Q+V +L K
Sbjct: 273 CPAA----LYQLMLDCWQKDRNNRPKFEQIVSILDK 304
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 136/279 (48%), Gaps = 35/279 (12%)
Query: 1 MIGGGAFGVVYRGSL--RDGTQI--AIKCLSAESKQG-TKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG VY G+L DG +I A+K L+ + G +FLTE ++ + HPN++ L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 56 IGCCVE-DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC---LGTASGLSFLH 111
+G C+ + + ++V Y+++ L N + PT ++ L A G+ FL
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL- 154
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPD---NVTHVSTRVAGTMGYLAPE 168
A VHRD+ A N +LD F K+ DFGLA+ D + H T + ++A E
Sbjct: 155 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 212
Query: 169 YALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDP 228
+ T K+DV+SFGVLL E++ + + D + + T L + RLL+ P
Sbjct: 213 SLQTQKFTTKSDVWSFGVLLWELM---TRGAPPYPD--VNTFDITVYLLQGRRLLQ---P 264
Query: 229 ELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
E P EVM L C A RP+ ++V +S
Sbjct: 265 EYCPDPLYEVM------LKCWHPKAEMRPSFSELVSRIS 297
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 134/279 (48%), Gaps = 35/279 (12%)
Query: 1 MIGGGAFGVVYRGSL--RDGTQI--AIKCLSAESKQG-TKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG VY G+L DG +I A+K L+ + G +FLTE ++ + HPN++ L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 56 IGCCVE-DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC---LGTASGLSFLH 111
+G C+ + + ++V Y+++ L N + PT ++ L A G+ FL
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL- 147
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPD---NVTHVSTRVAGTMGYLAPE 168
A VHRD+ A N +LD F K+ DFGLA+ D + H T + ++A E
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 205
Query: 169 YALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDP 228
+ T K+DV+SFGVLL E+++ + + T L + RLL+ P
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----FDITVYLLQGRRLLQ---P 257
Query: 229 ELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
E P EVM L C A RP+ ++V +S
Sbjct: 258 EYCPDPLYEVM------LKCWHPKAEMRPSFSELVSRIS 290
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 134/276 (48%), Gaps = 29/276 (10%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ----IAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQL 55
++G G FG V G L+ ++ +AIK L +++ ++FL E ++ HPN+++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G + ++V EY+EN SL + L +++ + + G ASG+ +L +D
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL---VGMLRGIASGMKYL---SD 165
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--YLAPEYALLG 173
VHRD+ A N+L++ N K+ DFGL+++ D+ T G + + +PE
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 174 QLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ T +DV+S+G++L E++S G D++ V+ ++L P
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL-----------PPPMD 274
Query: 233 FPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
P ++ L C Q + RP +Q+V +L K
Sbjct: 275 CPAA----LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 134/276 (48%), Gaps = 29/276 (10%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ----IAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQL 55
++G G FG V G L+ ++ +AIK L +++ ++FL E ++ HPN+++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G + ++V EY+EN SL + L +++ + + G ASG+ +L +D
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL---VGMLRGIASGMKYL---SD 165
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--YLAPEYALLG 173
VHRD+ A N+L++ N K+ DFGL+++ D+ T G + + +PE
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 174 QLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ T +DV+S+G++L E++S G D++ V+ ++L P
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL-----------PPPMD 274
Query: 233 FPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
P ++ L C Q + RP +Q+V +L K
Sbjct: 275 CPAA----LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 134/279 (48%), Gaps = 35/279 (12%)
Query: 1 MIGGGAFGVVYRGSL--RDGTQI--AIKCLSAESKQG-TKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG VY G+L DG +I A+K L+ + G +FLTE ++ + HPN++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 56 IGCCVE-DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC---LGTASGLSFLH 111
+G C+ + + ++V Y+++ L N + PT ++ L A G+ FL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL- 149
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPD---NVTHVSTRVAGTMGYLAPE 168
A VHRD+ A N +LD F K+ DFGLA+ D + H T + ++A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 169 YALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDP 228
+ T K+DV+SFGVLL E+++ + + T L + RLL+ P
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----FDITVYLLQGRRLLQ---P 259
Query: 229 ELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
E P EVM L C A RP+ ++V +S
Sbjct: 260 EYCPDPLYEVM------LKCWHPKAEMRPSFSELVSRIS 292
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 134/279 (48%), Gaps = 35/279 (12%)
Query: 1 MIGGGAFGVVYRGSL--RDGTQI--AIKCLSAESKQG-TKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG VY G+L DG +I A+K L+ + G +FLTE ++ + HPN++ L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 56 IGCCVE-DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC---LGTASGLSFLH 111
+G C+ + + ++V Y+++ L N + PT ++ L A G+ FL
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL- 150
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPD---NVTHVSTRVAGTMGYLAPE 168
A VHRD+ A N +LD F K+ DFGLA+ D + H T + ++A E
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALE 208
Query: 169 YALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDP 228
+ T K+DV+SFGVLL E+++ + + T L + RLL+ P
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----FDITVYLLQGRRLLQ---P 260
Query: 229 ELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
E P EVM L C A RP+ ++V +S
Sbjct: 261 EYCPDPLYEVM------LKCWHPKAEMRPSFSELVSRIS 293
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 136/279 (48%), Gaps = 35/279 (12%)
Query: 1 MIGGGAFGVVYRGSL--RDGTQI--AIKCLSAESKQG-TKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG VY G+L DG +I A+K L+ + G +FLTE ++ + HPN++ L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 56 IGCCVE-DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC---LGTASGLSFLH 111
+G C+ + + ++V Y+++ L N + PT ++ L A G+ FL
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL- 150
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPD---NVTHVSTRVAGTMGYLAPE 168
A VHRD+ A N +LD F K+ DFGLA+ D + H T + ++A E
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 208
Query: 169 YALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDP 228
+ T K+DV+SFGVLL E++ + + D + + T L + RLL+ P
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELM---TRGAPPYPD--VNTFDITVYLLQGRRLLQ---P 260
Query: 229 ELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
E P EVM L C A RP+ ++V +S
Sbjct: 261 EYCPDPLYEVM------LKCWHPKAEMRPSFSELVSRIS 293
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 134/276 (48%), Gaps = 29/276 (10%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ----IAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQL 55
++G G FG V G L+ ++ +AIK L +++ ++FL E ++ HPN+++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G + ++V EY+EN SL + L +++ + + G ASG+ +L +D
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL---VGMLRGIASGMKYL---SD 165
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--YLAPEYALLG 173
VHRD+ A N+L++ N K+ DFGL+++ D+ T G + + +PE
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 174 QLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ T +DV+S+G++L E++S G D++ V+ ++L P
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL-----------PPPMD 274
Query: 233 FPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
P ++ L C Q + RP +Q+V +L K
Sbjct: 275 CPAA----LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 134/276 (48%), Gaps = 29/276 (10%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ----IAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQL 55
++G G FG V G L+ ++ +AIK L +++ ++FL E ++ HPN+++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G + ++V EY+EN SL + L +++ + + G ASG+ +L +D
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL---VGMLRGIASGMKYL---SD 165
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--YLAPEYALLG 173
VHRD+ A N+L++ N K+ DFGL+++ D+ T G + + +PE
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 174 QLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ T +DV+S+G++L E++S G D++ V+ ++L P
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL-----------PPPMD 274
Query: 233 FPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
P ++ L C Q + RP +Q+V +L K
Sbjct: 275 CPAA----LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 136/279 (48%), Gaps = 35/279 (12%)
Query: 1 MIGGGAFGVVYRGSL--RDGTQI--AIKCLSAESKQG-TKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG VY G+L DG +I A+K L+ + G +FLTE ++ + HPN++ L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 56 IGCCVE-DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC---LGTASGLSFLH 111
+G C+ + + ++V Y+++ L N + PT ++ L A G+ FL
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL- 208
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPD---NVTHVSTRVAGTMGYLAPE 168
A VHRD+ A N +LD F K+ DFGLA+ D + H T + ++A E
Sbjct: 209 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 266
Query: 169 YALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDP 228
+ T K+DV+SFGVLL E++ ++ A + + T L + RLL+ P
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRLLQ---P 318
Query: 229 ELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
E P EVM L C A RP+ ++V +S
Sbjct: 319 EYCPDPLYEVM------LKCWHPKAEMRPSFSELVSRIS 351
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 134/276 (48%), Gaps = 29/276 (10%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ----IAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQL 55
++G G FG V G L+ ++ +AIK L +++ ++FL E ++ HPN+++L
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G + ++V EY+EN SL + L +++ + + G ASG+ +L +D
Sbjct: 83 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYL---SD 136
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--YLAPEYALLG 173
VHRD+ A N+L++ N K+ DFGL+++ D+ T G + + +PE
Sbjct: 137 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 196
Query: 174 QLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ T +DV+S+G++L E++S G D++ V+ ++L P
Sbjct: 197 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL-----------PPPMD 245
Query: 233 FPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
P ++ L C Q + RP +Q+V +L K
Sbjct: 246 CPAA----LYQLMLDCWQKDRNNRPKFEQIVSILDK 277
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 136/279 (48%), Gaps = 35/279 (12%)
Query: 1 MIGGGAFGVVYRGSL--RDGTQI--AIKCLSAESKQG-TKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG VY G+L DG +I A+K L+ + G +FLTE ++ + HPN++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 56 IGCCVE-DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC---LGTASGLSFLH 111
+G C+ + + ++V Y+++ L N + PT ++ L A G+ FL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKFL- 149
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPD---NVTHVSTRVAGTMGYLAPE 168
A VHRD+ A N +LD F K+ DFGLA+ D + H T + ++A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 169 YALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDP 228
+ T K+DV+SFGVLL E++ + + D + + T L + RLL+ P
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELM---TRGAPPYPD--VNTFDITVYLLQGRRLLQ---P 259
Query: 229 ELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
E P EVM L C A RP+ ++V +S
Sbjct: 260 EYCPDPLYEVM------LKCWHPKAEMRPSFSELVSRIS 292
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 134/276 (48%), Gaps = 29/276 (10%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ----IAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQL 55
++G G FG V G L+ ++ +AIK L +++ ++FL E ++ HPN+++L
Sbjct: 40 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 99
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G + ++V EY+EN SL + L +++ + + G ASG+ +L +D
Sbjct: 100 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYL---SD 153
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--YLAPEYALLG 173
VHRD+ A N+L++ N K+ DFGL+++ D+ T G + + +PE
Sbjct: 154 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 213
Query: 174 QLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ T +DV+S+G++L E++S G D++ V+ ++L P
Sbjct: 214 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL-----------PPPMD 262
Query: 233 FPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
P ++ L C Q + RP +Q+V +L K
Sbjct: 263 CPAA----LYQLMLDCWQKDRNNRPKFEQIVSILDK 294
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 133/276 (48%), Gaps = 29/276 (10%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ----IAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQL 55
++G G FG V G L+ ++ +AIK L +++ ++FL E ++ HPN+++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G + ++V EY+EN SL + L +++ + + G ASG+ +L +D
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL---VGMLRGIASGMKYL---SD 165
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--YLAPEYALLG 173
VHRD+ A N+L++ N K+ DFGL ++ D+ T G + + +PE
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 174 QLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ T +DV+S+G++L E++S G D++ V+ ++L P
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL-----------PPPMD 274
Query: 233 FPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
P ++ L C Q + RP +Q+V +L K
Sbjct: 275 CPAA----LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 131/276 (47%), Gaps = 29/276 (10%)
Query: 1 MIGGGAFGVVYRGSLR-DGTQ---IAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG V G L+ G + +AIK L +++ ++FL E ++ HPN++ L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G + ++V EY+EN SL L + ++ + + G ++G+ +L +D
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQL---VGMLRGISAGMKYL---SD 142
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--YLAPEYALLG 173
VHRD+ A N+L++ N K+ DFGL+++ D+ T G + + APE
Sbjct: 143 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFR 202
Query: 174 QLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ T +DV+S+G+++ E++S G D++ VE ++L P
Sbjct: 203 KFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRL-----------PSPMD 251
Query: 233 FPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
P ++ L C Q + RP ++V ML K
Sbjct: 252 CPAA----LYQLMLDCWQKERNSRPKFDEIVNMLDK 283
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 6/192 (3%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
+G G FG V+ G + T++A+K L + + FL E +++ ++H LV+L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
+ ++ EY+ SL + L + V L P + A G++++ + +HR
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERKN---YIHR 134
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKADV 181
D++A+NVL+ + KI DFGLA++ DN + + APE G T K+DV
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDV 194
Query: 182 YSFGVLLLEIIS 193
+SFG+LL EI++
Sbjct: 195 WSFGILLYEIVT 206
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 133/282 (47%), Gaps = 37/282 (13%)
Query: 2 IGGGAFGVVYRGSL-RDGTQIAIKCLSAESKQGT-------KEFLTEIDMIWNIRHPNLV 53
IG G FG+V++G L +D + +AIK L +G +EF E+ ++ N+ HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 54 QLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE 113
+L G N +V E++ L + LL K + W + + L A G+ ++ +
Sbjct: 87 KLYGLM--HNPPRMVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 114 ADPPIVHRDIKASNVLL-----DGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPE 168
+PPIVHRD+++ N+ L + K+ DFGL++ H + + G ++APE
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLGNFQWMAPE 196
Query: 169 Y--ALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIV 226
A T+KAD YSF ++L I++G + F + +++ +REEG I
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTG----EGPFDEYSYGKIKFINMIREEGLRPTI- 251
Query: 227 DPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
PE R V C RP +V+ LS+
Sbjct: 252 -------PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 103/195 (52%), Gaps = 13/195 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKE---FLTEIDMIWNIRHPNLVQLIGC 58
+G G FG V+ G T++A+K L KQG+ FL E +++ ++H LV+L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 72
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
++ I+ EY+EN SL + L ++++ ++ A G++F+ E
Sbjct: 73 VTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 126
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
+HR+++A+N+L+ KI DFGLA+L DN + + APE G T K
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 186
Query: 179 ADVYSFGVLLLEIIS 193
+DV+SFG+LL EI++
Sbjct: 187 SDVWSFGILLTEIVT 201
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 133/279 (47%), Gaps = 35/279 (12%)
Query: 1 MIGGGAFGVVYRGSL--RDGTQI--AIKCLSAESKQG-TKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG VY G+L DG +I A+K L+ + G +FLTE ++ + HPN++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 56 IGCCVE-DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC---LGTASGLSFLH 111
+G C+ + + ++V Y+++ L N + PT ++ L A G+ +L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL- 149
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDN---VTHVSTRVAGTMGYLAPE 168
A VHRD+ A N +LD F K+ DFGLA+ D H T + ++A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 169 YALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDP 228
+ T K+DV+SFGVLL E+++ + + T L + RLL+ P
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----FDITVYLLQGRRLLQ---P 259
Query: 229 ELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
E P EVM L C A RP+ ++V +S
Sbjct: 260 EYCPDPLYEVM------LKCWHPKAEMRPSFSELVSRIS 292
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 135/279 (48%), Gaps = 35/279 (12%)
Query: 1 MIGGGAFGVVYRGSL--RDGTQI--AIKCLSAESKQG-TKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG VY G+L DG +I A+K L+ + G +FLTE ++ + HPN++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 56 IGCCVE-DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC---LGTASGLSFLH 111
+G C+ + + ++V Y+++ L N + PT ++ L A G+ +L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL- 149
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDN---VTHVSTRVAGTMGYLAPE 168
A VHRD+ A N +LD F K+ DFGLA+ D H T + ++A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 169 YALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDP 228
+ T K+DV+SFGVLL E++ + + D + + T L + RLL+ P
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELM---TRGAPPYPD--VNTFDITVYLLQGRRLLQ---P 259
Query: 229 ELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
E P EVM L C A RP+ ++V +S
Sbjct: 260 EYCPDPLYEVM------LKCWHPKAEMRPSFSELVSRIS 292
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 133/279 (47%), Gaps = 35/279 (12%)
Query: 1 MIGGGAFGVVYRGSL--RDGTQI--AIKCLSAESKQG-TKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG VY G+L DG +I A+K L+ + G +FLTE ++ + HPN++ L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 56 IGCCVE-DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC---LGTASGLSFLH 111
+G C+ + + ++V Y+++ L N + PT ++ L A G+ +L
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL- 148
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDN---VTHVSTRVAGTMGYLAPE 168
A VHRD+ A N +LD F K+ DFGLA+ D H T + ++A E
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 206
Query: 169 YALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDP 228
+ T K+DV+SFGVLL E+++ + + T L + RLL+ P
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----FDITVYLLQGRRLLQ---P 258
Query: 229 ELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
E P EVM L C A RP+ ++V +S
Sbjct: 259 EYCPDPLYEVM------LKCWHPKAEMRPSFSELVSRIS 291
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 133/279 (47%), Gaps = 35/279 (12%)
Query: 1 MIGGGAFGVVYRGSL--RDGTQI--AIKCLSAESKQG-TKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG VY G+L DG +I A+K L+ + G +FLTE ++ + HPN++ L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 56 IGCCVE-DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC---LGTASGLSFLH 111
+G C+ + + ++V Y+++ L N + PT ++ L A G+ +L
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL- 167
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDN---VTHVSTRVAGTMGYLAPE 168
A VHRD+ A N +LD F K+ DFGLA+ D H T + ++A E
Sbjct: 168 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 225
Query: 169 YALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDP 228
+ T K+DV+SFGVLL E+++ + + T L + RLL+ P
Sbjct: 226 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----FDITVYLLQGRRLLQ---P 277
Query: 229 ELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
E P EVM L C A RP+ ++V +S
Sbjct: 278 EYCPDPLYEVM------LKCWHPKAEMRPSFSELVSRIS 310
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 135/279 (48%), Gaps = 35/279 (12%)
Query: 1 MIGGGAFGVVYRGSL--RDGTQI--AIKCLSAESKQG-TKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG VY G+L DG +I A+K L+ + G +FLTE ++ + HPN++ L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 56 IGCCVE-DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC---LGTASGLSFLH 111
+G C+ + + ++V Y+++ L N + PT ++ L A G+ +L
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL- 148
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDN---VTHVSTRVAGTMGYLAPE 168
A VHRD+ A N +LD F K+ DFGLA+ D H T + ++A E
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE 206
Query: 169 YALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDP 228
+ T K+DV+SFGVLL E++ + + D + + T L + RLL+ P
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELM---TRGAPPYPD--VNTFDITVYLLQGRRLLQ---P 258
Query: 229 ELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
E P EVM L C A RP+ ++V +S
Sbjct: 259 EYCPDPLYEVM------LKCWHPKAEMRPSFSELVSRIS 291
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 133/279 (47%), Gaps = 35/279 (12%)
Query: 1 MIGGGAFGVVYRGSL--RDGTQI--AIKCLSAESKQG-TKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG VY G+L DG +I A+K L+ + G +FLTE ++ + HPN++ L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 56 IGCCVE-DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC---LGTASGLSFLH 111
+G C+ + + ++V Y+++ L N + PT ++ L A G+ +L
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL- 168
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDN---VTHVSTRVAGTMGYLAPE 168
A VHRD+ A N +LD F K+ DFGLA+ D H T + ++A E
Sbjct: 169 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 226
Query: 169 YALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDP 228
+ T K+DV+SFGVLL E+++ + + T L + RLL+ P
Sbjct: 227 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----FDITVYLLQGRRLLQ---P 278
Query: 229 ELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
E P EVM L C A RP+ ++V +S
Sbjct: 279 EYCPDPLYEVM------LKCWHPKAEMRPSFSELVSRIS 311
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 133/279 (47%), Gaps = 35/279 (12%)
Query: 1 MIGGGAFGVVYRGSL--RDGTQI--AIKCLSAESKQG-TKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG VY G+L DG +I A+K L+ + G +FLTE ++ + HPN++ L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 56 IGCCVE-DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC---LGTASGLSFLH 111
+G C+ + + ++V Y+++ L N + PT ++ L A G+ +L
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL- 146
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDN---VTHVSTRVAGTMGYLAPE 168
A VHRD+ A N +LD F K+ DFGLA+ D H T + ++A E
Sbjct: 147 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 204
Query: 169 YALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDP 228
+ T K+DV+SFGVLL E+++ + + T L + RLL+ P
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----FDITVYLLQGRRLLQ---P 256
Query: 229 ELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
E P EVM L C A RP+ ++V +S
Sbjct: 257 EYCPDPLYEVM------LKCWHPKAEMRPSFSELVSRIS 289
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 133/279 (47%), Gaps = 35/279 (12%)
Query: 1 MIGGGAFGVVYRGSL--RDGTQI--AIKCLSAESKQG-TKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG VY G+L DG +I A+K L+ + G +FLTE ++ + HPN++ L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 56 IGCCVE-DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC---LGTASGLSFLH 111
+G C+ + + ++V Y+++ L N + PT ++ L A G+ +L
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL- 141
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDN---VTHVSTRVAGTMGYLAPE 168
A VHRD+ A N +LD F K+ DFGLA+ D H T + ++A E
Sbjct: 142 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 199
Query: 169 YALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDP 228
+ T K+DV+SFGVLL E+++ + + T L + RLL+ P
Sbjct: 200 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----FDITVYLLQGRRLLQ---P 251
Query: 229 ELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
E P EVM L C A RP+ ++V +S
Sbjct: 252 EYCPDPLYEVM------LKCWHPKAEMRPSFSELVSRIS 284
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 135/279 (48%), Gaps = 35/279 (12%)
Query: 1 MIGGGAFGVVYRGSL--RDGTQI--AIKCLSAESKQG-TKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG VY G+L DG +I A+K L+ + G +FLTE ++ + HPN++ L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 56 IGCCVE-DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC---LGTASGLSFLH 111
+G C+ + + ++V Y+++ L N + PT ++ L A G+ +L
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL- 147
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDN---VTHVSTRVAGTMGYLAPE 168
A VHRD+ A N +LD F K+ DFGLA+ D H T + ++A E
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 205
Query: 169 YALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDP 228
+ T K+DV+SFGVLL E++ ++ A + + T L + RLL+ P
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRLLQ---P 257
Query: 229 ELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
E P EVM L C A RP+ ++V +S
Sbjct: 258 EYCPDPLYEVM------LKCWHPKAEMRPSFSELVSRIS 290
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 133/279 (47%), Gaps = 35/279 (12%)
Query: 1 MIGGGAFGVVYRGSL--RDGTQI--AIKCLSAESKQG-TKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG VY G+L DG +I A+K L+ + G +FLTE ++ + HPN++ L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 56 IGCCVE-DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC---LGTASGLSFLH 111
+G C+ + + ++V Y+++ L N + PT ++ L A G+ +L
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFGLQVAKGMKYL- 144
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDN---VTHVSTRVAGTMGYLAPE 168
A VHRD+ A N +LD F K+ DFGLA+ D H T + ++A E
Sbjct: 145 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 202
Query: 169 YALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDP 228
+ T K+DV+SFGVLL E+++ + + T L + RLL+ P
Sbjct: 203 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----FDITVYLLQGRRLLQ---P 254
Query: 229 ELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
E P EVM L C A RP+ ++V +S
Sbjct: 255 EYCPDPLYEVM------LKCWHPKAEMRPSFSELVSRIS 287
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 136/278 (48%), Gaps = 31/278 (11%)
Query: 1 MIGGGAFGVVYRGSLR-DGTQ---IAIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG V G L+ G + +AIK L S +++ ++FL+E ++ HPN++ L
Sbjct: 40 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 99
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G + +++ E++EN SL + L + ++ + + G A+G+ +L AD
Sbjct: 100 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL---VGMLRGIAAGMKYL---AD 153
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTH--VSTRVAGTMG--YLAPEYAL 171
VHRD+ A N+L++ N K+ DFGL++ D+ + ++ + G + + APE
Sbjct: 154 MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 172 LGQLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPEL 230
+ T +DV+S+G+++ E++S G D++ +E ++L P
Sbjct: 214 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL-----------PPP 262
Query: 231 TQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
P ++ L C Q ++RP Q+V L K
Sbjct: 263 MDCPSA----LHQLMLDCWQKDRNHRPKFGQIVNTLDK 296
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ----IAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+IG G G V G LR Q +AIK L A +++ ++FL+E ++ HPN+++L
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G ++V EY+EN SL L ++ + + G +G+ +L +D
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL---VGMLRGVGAGMRYL---SD 169
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--YLAPEYALLG 173
VHRD+ A NVL+D N K+ DFGL+++ D+ T G + + APE
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFR 229
Query: 174 QLTKKADVYSFGVLLLEIIS 193
+ +DV+SFGV++ E+++
Sbjct: 230 TFSSASDVWSFGVVMWEVLA 249
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG FG VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + VS A + L A+ +S E + +
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVS------AVVLLYMATQISSAMEYLEKKNFI 131
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ----IAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+IG G G V G LR Q +AIK L A +++ ++FL+E ++ HPN+++L
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G ++V EY+EN SL L ++ + + G +G+ +L +D
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL---VGMLRGVGAGMRYL---SD 169
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--YLAPEYALLG 173
VHRD+ A NVL+D N K+ DFGL+++ D+ T G + + APE
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFR 229
Query: 174 QLTKKADVYSFGVLLLEIIS 193
+ +DV+SFGV++ E+++
Sbjct: 230 TFSSASDVWSFGVVMWEVLA 249
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 132/282 (46%), Gaps = 37/282 (13%)
Query: 2 IGGGAFGVVYRGSL-RDGTQIAIKCLSAESKQGT-------KEFLTEIDMIWNIRHPNLV 53
IG G FG+V++G L +D + +AIK L +G +EF E+ ++ N+ HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 54 QLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE 113
+L G N +V E++ L + LL K + W + + L A G+ ++ +
Sbjct: 87 KLYGLM--HNPPRMVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 114 ADPPIVHRDIKASNVLL-----DGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPE 168
+PPIVHRD+++ N+ L + K+ DFG ++ H + + G ++APE
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGLLGNFQWMAPE 196
Query: 169 Y--ALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIV 226
A T+KAD YSF ++L I++G + F + +++ +REEG I
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTG----EGPFDEYSYGKIKFINMIREEGLRPTI- 251
Query: 227 DPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
PE R V C RP +V+ LS+
Sbjct: 252 -------PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 133/276 (48%), Gaps = 29/276 (10%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ----IAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQL 55
++G G FG V G L+ ++ +AIK L +++ ++FL E ++ HPN+++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G + ++V E +EN SL + L +++ + + G ASG+ +L +D
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL---VGMLRGIASGMKYL---SD 165
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--YLAPEYALLG 173
VHRD+ A N+L++ N K+ DFGL+++ D+ T G + + +PE
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 174 QLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ T +DV+S+G++L E++S G D++ V+ ++L P
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL-----------PPPMD 274
Query: 233 FPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
P ++ L C Q + RP +Q+V +L K
Sbjct: 275 CPAA----LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 132/282 (46%), Gaps = 37/282 (13%)
Query: 2 IGGGAFGVVYRGSL-RDGTQIAIKCLSAESKQGT-------KEFLTEIDMIWNIRHPNLV 53
IG G FG+V++G L +D + +AIK L +G +EF E+ ++ N+ HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 54 QLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE 113
+L G N +V E++ L + LL K + W + + L A G+ ++ +
Sbjct: 87 KLYGLM--HNPPRMVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDIALGIEYMQNQ 141
Query: 114 ADPPIVHRDIKASNVLL-----DGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPE 168
+PPIVHRD+++ N+ L + K+ DF L++ H + + G ++APE
Sbjct: 142 -NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGLLGNFQWMAPE 196
Query: 169 Y--ALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIV 226
A T+KAD YSF ++L I++G + F + +++ +REEG I
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTG----EGPFDEYSYGKIKFINMIREEGLRPTI- 251
Query: 227 DPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
PE R V C RP +V+ LS+
Sbjct: 252 -------PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 133/276 (48%), Gaps = 29/276 (10%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ----IAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQL 55
++G G FG V G L+ ++ +AIK L +++ ++FL E ++ HPN+++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G + ++V E +EN SL + L +++ + + G ASG+ +L +D
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL---VGMLRGIASGMKYL---SD 165
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--YLAPEYALLG 173
VHRD+ A N+L++ N K+ DFGL+++ D+ T G + + +PE
Sbjct: 166 MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 174 QLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ T +DV+S+G++L E++S G D++ V+ ++L P
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL-----------PPPMD 274
Query: 233 FPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
P ++ L C Q + RP +Q+V +L K
Sbjct: 275 CPAA----LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 135/289 (46%), Gaps = 30/289 (10%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ----IAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG V G L+ + +AIK L A + + ++FL+E ++ HPN++ L
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 95
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G + +++ EY+EN SL L + ++ + + G SG+ +L +D
Sbjct: 96 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL---VGMLRGIGSGMKYL---SD 149
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--YLAPEYALLG 173
VHRD+ A N+L++ N K+ DFG++++ D+ T G + + APE
Sbjct: 150 MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 209
Query: 174 QLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ T +DV+S+G+++ E++S G D++ +E ++L P
Sbjct: 210 KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL-----------PPPMD 258
Query: 233 FPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLNEKALTEPG 281
P + ++ L C Q RP Q+V ML K + N +L G
Sbjct: 259 CP----IALHQLMLDCWQKERSDRPKFGQIVNMLDKLIR-NPNSLKRTG 302
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 135/289 (46%), Gaps = 30/289 (10%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ----IAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG V G L+ + +AIK L A + + ++FL+E ++ HPN++ L
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 80
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G + +++ EY+EN SL L + ++ + + G SG+ +L +D
Sbjct: 81 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL---VGMLRGIGSGMKYL---SD 134
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--YLAPEYALLG 173
VHRD+ A N+L++ N K+ DFG++++ D+ T G + + APE
Sbjct: 135 MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 194
Query: 174 QLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ T +DV+S+G+++ E++S G D++ +E ++L P
Sbjct: 195 KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL-----------PPPMD 243
Query: 233 FPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLNEKALTEPG 281
P + ++ L C Q RP Q+V ML K + N +L G
Sbjct: 244 CP----IALHQLMLDCWQKERSDRPKFGQIVNMLDKLIR-NPNSLKRTG 287
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 135/289 (46%), Gaps = 30/289 (10%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ----IAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG V G L+ + +AIK L A + + ++FL+E ++ HPN++ L
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 74
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G + +++ EY+EN SL L + ++ + + G SG+ +L +D
Sbjct: 75 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL---VGMLRGIGSGMKYL---SD 128
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--YLAPEYALLG 173
VHRD+ A N+L++ N K+ DFG++++ D+ T G + + APE
Sbjct: 129 MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 188
Query: 174 QLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ T +DV+S+G+++ E++S G D++ +E ++L P
Sbjct: 189 KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL-----------PPPMD 237
Query: 233 FPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLNEKALTEPG 281
P + ++ L C Q RP Q+V ML K + N +L G
Sbjct: 238 CP----IALHQLMLDCWQKERSDRPKFGQIVNMLDKLIR-NPNSLKRTG 281
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 133/276 (48%), Gaps = 29/276 (10%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ----IAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQL 55
++G G FG V G L+ ++ +AIK L +++ ++FL E ++ HPN+++L
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G + ++V E +EN SL + L +++ + + G ASG+ +L +D
Sbjct: 83 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIASGMKYL---SD 136
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--YLAPEYALLG 173
VHRD+ A N+L++ N K+ DFGL+++ D+ T G + + +PE
Sbjct: 137 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 196
Query: 174 QLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ T +DV+S+G++L E++S G D++ V+ ++L P
Sbjct: 197 KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL-----------PPPMD 245
Query: 233 FPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
P ++ L C Q + RP +Q+V +L K
Sbjct: 246 CPAA----LYQLMLDCWQKDRNNRPKFEQIVSILDK 277
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 31/281 (11%)
Query: 1 MIGGGAFGVVYRGSLR----DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG V RG L+ + +AIK L +++ +EFL+E ++ HPN+++L
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G +++ E++EN +L + L + ++ + + G ASG+ +L E +
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQ---LVGMLRGIASGMRYLAEMS- 136
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTH--VSTRVAGTMG--YLAPEYAL 171
VHRD+ A N+L++ N K+ DFGL++ +N + ++ + G + + APE
Sbjct: 137 --YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 172 LGQLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPEL 230
+ T +D +S+G+++ E++S G D++ +E ++L P
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRL-----------PPP 243
Query: 231 TQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
P ++ L C Q + RP QVV L K +
Sbjct: 244 PDCPTS----LHQLMLDCWQKDRNARPRFPQVVSALDKMIR 280
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 133/278 (47%), Gaps = 31/278 (11%)
Query: 1 MIGGGAFGVVYRGSLR----DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG V RG L+ + +AIK L +++ +EFL+E ++ HPN+++L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G +++ E++EN +L + L + ++ + + G ASG+ +L E +
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL---VGMLRGIASGMRYLAEMS- 138
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHV--STRVAGTMG--YLAPEYAL 171
VHRD+ A N+L++ N K+ DFGL++ +N + ++ + G + + APE
Sbjct: 139 --YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 172 LGQLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPEL 230
+ T +D +S+G+++ E++S G D++ +E ++L P
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRL-----------PPP 245
Query: 231 TQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
P ++ L C Q + RP QVV L K
Sbjct: 246 PDCPTS----LHQLMLDCWQKDRNARPRFPQVVSALDK 279
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 128/276 (46%), Gaps = 29/276 (10%)
Query: 1 MIGGGAFGVVYRGSLR----DGTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG V G L+ +AIK L +++ ++FL E ++ HPN+V L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G ++V E++EN +L L ++ + + G A+G+ +L AD
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQL---VGMLRGIAAGMRYL---AD 163
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--YLAPEYALLG 173
VHRD+ A N+L++ N K+ DFGL+++ D+ V T G + + APE
Sbjct: 164 MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYR 223
Query: 174 QLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ T +DV+S+G+++ E++S G D++ +E ++L P
Sbjct: 224 KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL-----------PAPMD 272
Query: 233 FPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
P ++ L C Q RP +Q+V +L K
Sbjct: 273 CPAG----LHQLMLDCWQKERAERPKFEQIVGILDK 304
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 100/192 (52%), Gaps = 6/192 (3%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
+G G FG V+ G + T++A+K L + + FL E +++ ++H LV+L +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
+ ++ E++ SL + L + V L P + A G++++ + +HR
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERKN---YIHR 133
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKADV 181
D++A+NVL+ + KI DFGLA++ DN + + APE G T K++V
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNV 193
Query: 182 YSFGVLLLEIIS 193
+SFG+LL EI++
Sbjct: 194 WSFGILLYEIVT 205
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 113/198 (57%), Gaps = 11/198 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G+FG VY+G + + ++A + Q + F E+ ++ RH N++ +G +
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
I V ++ E +SL + L S++K+ + +I TA G+ +LH ++ I+HR
Sbjct: 80 PQLAI-VTQWCEGSSLYHHLHASETKF---EMKKLIDIARQTARGMDYLHAKS---IIHR 132
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPD-NVTHVSTRVAGTMGYLAPEYALL---GQLTK 177
D+K++N+ L + KIGDFGLA + + +H +++G++ ++APE + +
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 178 KADVYSFGVLLLEIISGR 195
++DVY+FG++L E+++G+
Sbjct: 193 QSDVYAFGIVLYELMTGQ 210
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + VS A + L A+ +S E + +
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVS------AVVLLYMATQISSAMEYLEKKNFI 131
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 13/195 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIGC 58
+G G G V+ G T++A+K L KQG+ FL E +++ ++H LV+L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
++ I+ EY+EN SL + L ++++ ++ A G++F+ E
Sbjct: 77 VTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---Y 130
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
+HRD++A+N+L+ KI DFGLA+L D + + APE G T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 179 ADVYSFGVLLLEIIS 193
+DV+SFG+LL EI++
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + VS A + L A+ +S E + +
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVS------AVVLLYMATQISSAMEYLEKKNFI 133
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 7/192 (3%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
+G G FGVV G + +A+K + E EF E + + HP LV+ G C +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
+ +V EY+ N L N L +S L+ +C G++FL +HR
Sbjct: 75 EYPIYIVTEYISNGCLLNYL---RSHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHR 128
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKADV 181
D+ A N L+D + K+ DFG+ + D+ S + + APE + + K+DV
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDV 188
Query: 182 YSFGVLLLEIIS 193
++FG+L+ E+ S
Sbjct: 189 WAFGILMWEVFS 200
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + VS A + L A+ +S E + +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVS------AVVLLYMATQISSAMEYLEKKNFI 133
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + VS A + L A+ +S E + +
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVS------AVVLLYMATQISSAMEYLEKKNFI 131
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + VS A + L A+ +S E + +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVS------AVVLLYMATQISSAMEYLEKKNFI 138
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + VS A + L A+ +S E + +
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVS------AVVLLYMATQISSAMEYLEKKNFI 133
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + VS A + L A+ +S E + +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVS------AVVLLYMATQISSAMEYLEKKNFI 133
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 99/192 (51%), Gaps = 7/192 (3%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
+G G FG V+ + T++A+K + S + FL E +++ ++H LV+L +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
+ I+ E++ SL + L + L P + A G++F+ + +HR
Sbjct: 82 EPIYIIT-EFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRN---YIHR 135
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKADV 181
D++A+N+L+ + KI DFGLA++ DN + + APE G T K+DV
Sbjct: 136 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 195
Query: 182 YSFGVLLLEIIS 193
+SFG+LL+EI++
Sbjct: 196 WSFGILLMEIVT 207
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 135/278 (48%), Gaps = 31/278 (11%)
Query: 1 MIGGGAFGVVYRGSLR-DGTQ---IAIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+IG G FG V G L+ G + +AIK L S +++ ++FL+E ++ HPN++ L
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 73
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G + +++ E++EN SL + L + ++ + + G A+G+ +L AD
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL---VGMLRGIAAGMKYL---AD 127
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTH--VSTRVAGTMG--YLAPEYAL 171
VHR + A N+L++ N K+ DFGL++ D+ + ++ + G + + APE
Sbjct: 128 MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 172 LGQLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPEL 230
+ T +DV+S+G+++ E++S G D++ +E ++L P
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL-----------PPP 236
Query: 231 TQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
P ++ L C Q ++RP Q+V L K
Sbjct: 237 MDCPSA----LHQLMLDCWQKDRNHRPKFGQIVNTLDK 270
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 99/192 (51%), Gaps = 7/192 (3%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
+G G FG V+ + T++A+K + S + FL E +++ ++H LV+L +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK 254
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
+ I+ E++ SL + L + L P + A G++F+ + +HR
Sbjct: 255 EPIYIIT-EFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRN---YIHR 308
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKADV 181
D++A+N+L+ + KI DFGLA++ DN + + APE G T K+DV
Sbjct: 309 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 368
Query: 182 YSFGVLLLEIIS 193
+SFG+LL+EI++
Sbjct: 369 WSFGILLMEIVT 380
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + V+ A + L A+ +S E + +
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQEVN------AVVLLYMATQISSAMEYLEKKNFI 134
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 195 DVWAFGVLLWEIAT 208
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
+G G FGVV G R +AIK + E EF+ E ++ N+ H LVQL G C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
++ EY+ N L N L + ++ + +C + +L + +HR
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESKQ---FLHR 128
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKADV 181
D+ A N L++ K+ DFGL++ D+ S + + PE + + + K+D+
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 188
Query: 182 YSFGVLLLEIIS 193
++FGVL+ EI S
Sbjct: 189 WAFGVLMWEIYS 200
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 112/198 (56%), Gaps = 11/198 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G+FG VY+G + + ++A + Q + F E+ ++ RH N++ +G +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
I V ++ E +SL + L S++K+ + +I TA G+ +LH ++ I+HR
Sbjct: 92 PQLAI-VTQWCEGSSLYHHLHASETKF---EMKKLIDIARQTARGMDYLHAKS---IIHR 144
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPD-NVTHVSTRVAGTMGYLAPEYALL---GQLTK 177
D+K++N+ L + KIGDFGLA + +H +++G++ ++APE + +
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 178 KADVYSFGVLLLEIISGR 195
++DVY+FG++L E+++G+
Sbjct: 205 QSDVYAFGIVLYELMTGQ 222
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
+G G FGVV G R +AIK + E EF+ E ++ N+ H LVQL G C +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
++ EY+ N L N L + ++ + +C + +L + +HR
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESKQ---FLHR 124
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKADV 181
D+ A N L++ K+ DFGL++ D+ S + + PE + + + K+D+
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 184
Query: 182 YSFGVLLLEIIS 193
++FGVL+ EI S
Sbjct: 185 WAFGVLMWEIYS 196
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + V+ A + L A+ +S E + +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVN------AVVLLYMATQISSAMEYLEKKNFI 135
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + V+ A + L A+ +S E + +
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNRQEVN------AVVLLYMATQISSAMEYLEKKNFI 134
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 195 DVWAFGVLLWEIAT 208
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + V+ A + L A+ +S E + +
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQEVN------AVVLLYMATQISSAMEYLEKKNFI 138
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + V+ A + L A+ +S E + +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVN------AVVLLYMATQISSAMEYLEKKNFI 138
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + V+ A + L A+ +S E + +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVN------AVVLLYMATQISSAMEYLEKKNFI 135
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
+G G FGVV G R +AIK + E EF+ E ++ N+ H LVQL G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
++ EY+ N L N L + ++ + +C + +L + +HR
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESKQ---FLHR 129
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKADV 181
D+ A N L++ K+ DFGL++ D+ S + + PE + + + K+D+
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 189
Query: 182 YSFGVLLLEIIS 193
++FGVL+ EI S
Sbjct: 190 WAFGVLMWEIYS 201
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
+G G FGVV G R +AIK + E EF+ E ++ N+ H LVQL G C +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
++ EY+ N L N L + ++ + +C + +L + +HR
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESKQ---FLHR 135
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKADV 181
D+ A N L++ K+ DFGL++ D+ S + + PE + + + K+D+
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 195
Query: 182 YSFGVLLLEIIS 193
++FGVL+ EI S
Sbjct: 196 WAFGVLMWEIYS 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + V+ A + L A+ +S E + +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVN------AVVLLYMATQISSAMEYLEKKNFI 135
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
+G G FGVV G R +AIK + E EF+ E ++ N+ H LVQL G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
++ EY+ N L N L + ++ + +C + +L + +HR
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESKQ---FLHR 129
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKADV 181
D+ A N L++ K+ DFGL++ D+ S + + PE + + + K+D+
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDI 189
Query: 182 YSFGVLLLEIIS 193
++FGVL+ EI S
Sbjct: 190 WAFGVLMWEIYS 201
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + V+ A + L A+ +S E + +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVN------AVVLLYMATQISSAMEYLEKKNFI 133
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + V+ A + L A+ +S E + +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVN------AVVLLYMATQISSAMEYLEKKNFI 138
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
+G G FGVV G R +AIK + E EF+ E ++ N+ H LVQL G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
++ EY+ N L N L + ++ + +C + +L + +HR
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESKQ---FLHR 144
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKADV 181
D+ A N L++ K+ DFGL++ D+ S + + PE + + + K+D+
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDI 204
Query: 182 YSFGVLLLEIIS 193
++FGVL+ EI S
Sbjct: 205 WAFGVLMWEIYS 216
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + V+ A + L A+ +S E + +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVN------AVVLLYMATQISSAMEYLEKKNFI 138
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + V+ A + L A+ +S E + +
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQEVN------AVVLLYMATQISSAMEYLEKKNFI 146
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 206
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 207 DVWAFGVLLWEIAT 220
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + V+ A + L A+ +S E + +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVN------AVVLLYMATQISSAMEYLEKKNFI 133
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + V+ A + L A+ +S E + +
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQEVN------AVVLLYMATQISSAMEYLEKKNFI 137
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 198 DVWAFGVLLWEIAT 211
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
+G G FGVV G R +AIK + E EF+ E ++ N+ H LVQL G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
++ EY+ N L N L + ++ + +C + +L + +HR
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESKQ---FLHR 144
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKADV 181
D+ A N L++ K+ DFGL++ D+ S + + PE + + + K+D+
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 204
Query: 182 YSFGVLLLEIIS 193
++FGVL+ EI S
Sbjct: 205 WAFGVLMWEIYS 216
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 111/198 (56%), Gaps = 11/198 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G+FG VY+G + + ++A + Q + F E+ ++ RH N++ +G
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
I V ++ E +SL + L S++K+ + +I TA G+ +LH ++ I+HR
Sbjct: 92 PQLAI-VTQWCEGSSLYHHLHASETKF---EMKKLIDIARQTARGMDYLHAKS---IIHR 144
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPD-NVTHVSTRVAGTMGYLAPEYALL---GQLTK 177
D+K++N+ L + KIGDFGLA + +H +++G++ ++APE + +
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 178 KADVYSFGVLLLEIISGR 195
++DVY+FG++L E+++G+
Sbjct: 205 QSDVYAFGIVLYELMTGQ 222
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 116/213 (54%), Gaps = 11/213 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G+FG VY+G + + ++A + Q + F E+ ++ RH N++ +G +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
I V ++ E +SL + L ++K+ + +I TA G+ +LH ++ I+HR
Sbjct: 78 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHR 130
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPD-NVTHVSTRVAGTMGYLAPEYALL---GQLTK 177
D+K++N+ L + KIGDFGLA + + +H +++G++ ++APE + +
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 190
Query: 178 KADVYSFGVLLLEIISGRSSSKAAFGDDMLILV 210
++DVY+FG++L E+++G+ D +I +
Sbjct: 191 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 223
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 116/213 (54%), Gaps = 11/213 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G+FG VY+G + + ++A + Q + F E+ ++ RH N++ +G +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
I V ++ E +SL + L ++K+ + +I TA G+ +LH ++ I+HR
Sbjct: 76 PQLAI-VTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---IIHR 128
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPD-NVTHVSTRVAGTMGYLAPEYALL---GQLTK 177
D+K++N+ L + KIGDFGLA + + +H +++G++ ++APE + +
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 178 KADVYSFGVLLLEIISGRSSSKAAFGDDMLILV 210
++DVY+FG++L E+++G+ D +I +
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 116/213 (54%), Gaps = 11/213 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G+FG VY+G + + ++A + Q + F E+ ++ RH N++ +G +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
I V ++ E +SL + L ++K+ + +I TA G+ +LH ++ I+HR
Sbjct: 81 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHR 133
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPD-NVTHVSTRVAGTMGYLAPEYALL---GQLTK 177
D+K++N+ L + KIGDFGLA + + +H +++G++ ++APE + +
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 178 KADVYSFGVLLLEIISGRSSSKAAFGDDMLILV 210
++DVY+FG++L E+++G+ D +I +
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 226
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 116/213 (54%), Gaps = 11/213 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G+FG VY+G + + ++A + Q + F E+ ++ RH N++ +G +
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
I V ++ E +SL + L ++K+ + +I TA G+ +LH ++ I+HR
Sbjct: 103 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHR 155
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPD-NVTHVSTRVAGTMGYLAPEYALL---GQLTK 177
D+K++N+ L + KIGDFGLA + + +H +++G++ ++APE + +
Sbjct: 156 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 215
Query: 178 KADVYSFGVLLLEIISGRSSSKAAFGDDMLILV 210
++DVY+FG++L E+++G+ D +I +
Sbjct: 216 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 248
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 116/213 (54%), Gaps = 11/213 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G+FG VY+G + + ++A + Q + F E+ ++ RH N++ +G +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
I V ++ E +SL + L ++K+ + +I TA G+ +LH ++ I+HR
Sbjct: 104 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHR 156
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPD-NVTHVSTRVAGTMGYLAPEYALL---GQLTK 177
D+K++N+ L + KIGDFGLA + + +H +++G++ ++APE + +
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 178 KADVYSFGVLLLEIISGRSSSKAAFGDDMLILV 210
++DVY+FG++L E+++G+ D +I +
Sbjct: 217 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 249
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 116/213 (54%), Gaps = 11/213 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G+FG VY+G + + ++A + Q + F E+ ++ RH N++ +G +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
I V ++ E +SL + L ++K+ + +I TA G+ +LH ++ I+HR
Sbjct: 81 PQLAI-VTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---IIHR 133
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPD-NVTHVSTRVAGTMGYLAPEYALL---GQLTK 177
D+K++N+ L + KIGDFGLA + + +H +++G++ ++APE + +
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 178 KADVYSFGVLLLEIISGRSSSKAAFGDDMLILV 210
++DVY+FG++L E+++G+ D +I +
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 226
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 105/201 (52%), Gaps = 14/201 (6%)
Query: 1 MIGGGAFGVVYRGSLRDGT-----QIAIKCLSAESKQGTK-EFLTEIDMIWNIRHPNLVQ 54
+IG G FG VY+G L+ + +AIK L A + + +FL E ++ H N+++
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L G + +++ EY+EN +L L ++ L + G A+G+ +L A
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQL---VGMLRGIAAGMKYL---A 164
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--YLAPEYALL 172
+ VHRD+ A N+L++ N K+ DFGL+++ D+ T G + + APE
Sbjct: 165 NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY 224
Query: 173 GQLTKKADVYSFGVLLLEIIS 193
+ T +DV+SFG+++ E+++
Sbjct: 225 RKFTSASDVWSFGIVMWEVMT 245
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 126/282 (44%), Gaps = 33/282 (11%)
Query: 2 IGGGAFGVVYRGSL------RDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+G GAFG V+ +D +A+K L S K+F E +++ N++H ++V+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 56 IGCCVEDNNRILVYEYLENNSLAN---------ALLGSKSKYVSLDWPTRANICLGTASG 106
G CVE + I+V+EY+++ L L+ + L +I A+G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 107 LSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYL 165
+ +L A VHRD+ N L+ N KIGDFG+++ ++ + V + ++
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 166 APEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEI 225
PE + + T ++DV+S GV+L EI + ++ +I + +GR+L
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI------ECITQGRVL-- 249
Query: 226 VDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
Q P ++ L C Q H R +K + +L
Sbjct: 250 ------QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ +V EY+ +L + L + V+ A + L A+ +S E + +
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVT------AVVLLYMATQISSAMEYLEKKNFI 152
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+ A N L+ N K+ DFGL++L + + + APE + K+
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKS 212
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 213 DVWAFGVLLWEIAT 226
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 115/213 (53%), Gaps = 11/213 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G+FG VY+G + + ++A + Q + F E+ ++ RH N++ +G
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
I V ++ E +SL + L ++K+ + +I TA G+ +LH ++ I+HR
Sbjct: 76 PQLAI-VTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---IIHR 128
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPD-NVTHVSTRVAGTMGYLAPEYALL---GQLTK 177
D+K++N+ L + KIGDFGLA + + +H +++G++ ++APE + +
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 178 KADVYSFGVLLLEIISGRSSSKAAFGDDMLILV 210
++DVY+FG++L E+++G+ D +I +
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + VS A + L A+ +S E + +
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVS------AVVLLYMATQISSAMEYLEKKNFI 340
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HR++ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 400
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 401 DVWAFGVLLWEIAT 414
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 105/216 (48%), Gaps = 21/216 (9%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCC 59
++G G FG + + R+ G + +K L ++ + FL E+ ++ + HPN+++ IG
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
+D + EY++ +L + S+Y W R + ASG+++LH I+
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQY---PWSQRVSFAKDIASGMAYLHSMN---II 130
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS-------------TRVAGTMGYLA 166
HRD+ + N L+ N + + DFGLA+L D T V G ++A
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 167 PEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAF 202
PE +K DV+SFG++L EII GR ++ +
Sbjct: 191 PEMINGRSYDEKVDVFSFGIVLCEII-GRVNADPDY 225
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 115/213 (53%), Gaps = 11/213 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G+FG VY+G + + ++A + Q + F E+ ++ RH N++ +G +
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
I V ++ E +SL + L ++K+ + +I TA G+ +LH ++ I+HR
Sbjct: 96 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHR 148
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPD-NVTHVSTRVAGTMGYLAPEYALL---GQLTK 177
D+K++N+ L + KIGDFGLA + +H +++G++ ++APE + +
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 208
Query: 178 KADVYSFGVLLLEIISGRSSSKAAFGDDMLILV 210
++DVY+FG++L E+++G+ D +I +
Sbjct: 209 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 241
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 115/213 (53%), Gaps = 11/213 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G+FG VY+G + + ++A + Q + F E+ ++ RH N++ +G +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
I V ++ E +SL + L ++K+ + +I TA G+ +LH ++ I+HR
Sbjct: 76 PQLAI-VTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---IIHR 128
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPD-NVTHVSTRVAGTMGYLAPEYALL---GQLTK 177
D+K++N+ L + KIGDFGLA + +H +++G++ ++APE + +
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 178 KADVYSFGVLLLEIISGRSSSKAAFGDDMLILV 210
++DVY+FG++L E+++G+ D +I +
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 115/213 (53%), Gaps = 11/213 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G+FG VY+G + + ++A + Q + F E+ ++ RH N++ +G +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
I V ++ E +SL + L ++K+ + +I TA G+ +LH ++ I+HR
Sbjct: 104 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHR 156
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPD-NVTHVSTRVAGTMGYLAPEYALL---GQLTK 177
D+K++N+ L + KIGDFGLA + +H +++G++ ++APE + +
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 178 KADVYSFGVLLLEIISGRSSSKAAFGDDMLILV 210
++DVY+FG++L E+++G+ D +I +
Sbjct: 217 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 249
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + V+ A + L A+ +S E + +
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQEVN------AVVLLYMATQISSAMEYLEKKNFI 337
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HR++ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 338 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 397
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 398 DVWAFGVLLWEIAT 411
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 2 IGGGAFGVVYRGSLRDGT-QIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+GGG +G VY G + + +A+K L ++ + +EFL E ++ I+HPNLVQL+G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP-IV 119
+ ++ E++ +L + L + V+ A + L A+ +S E + +
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVN------AVVLLYMATQISSAMEYLEKKNFI 379
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HR++ A N L+ N K+ DFGL++L + + + APE + + K+
Sbjct: 380 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 439
Query: 180 DVYSFGVLLLEIIS 193
DV++FGVLL EI +
Sbjct: 440 DVWAFGVLLWEIAT 453
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 99/197 (50%), Gaps = 19/197 (9%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIG 57
IG G+FG VY +R+ +AIK +S KQ ++ + E+ + +RHPN +Q G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
C + ++ LV EY + A+ LL K L A + G GL++LH
Sbjct: 122 CYLREHTAWLVMEYCLGS--ASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHN--- 174
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALL---GQ 174
++HRD+KA N+LL K+GDFG A ++ + GT ++APE L GQ
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFGSA-----SIMAPANXFVGTPYWMAPEVILAMDEGQ 229
Query: 175 LTKKADVYSFGVLLLEI 191
K DV+S G+ +E+
Sbjct: 230 YDGKVDVWSLGITCIEL 246
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 99/197 (50%), Gaps = 19/197 (9%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSAESKQGT---KEFLTEIDMIWNIRHPNLVQLIG 57
IG G+FG VY +R+ +AIK +S KQ ++ + E+ + +RHPN +Q G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
C + ++ LV EY + A+ LL K L A + G GL++LH
Sbjct: 83 CYLREHTAWLVMEYCLGS--ASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHN--- 135
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALL---GQ 174
++HRD+KA N+LL K+GDFG A ++ + GT ++APE L GQ
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSA-----SIMAPANXFVGTPYWMAPEVILAMDEGQ 190
Query: 175 LTKKADVYSFGVLLLEI 191
K DV+S G+ +E+
Sbjct: 191 YDGKVDVWSLGITCIEL 207
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 2 IGGGAFGVVYRGSL------RDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+G GAFG V+ +D +A+K L + K+F E +++ N++H ++V+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 56 IGCCVEDNNRILVYEYLENNSLANALL--GSKSKYVSLDWPTRANICLG----------T 103
G C + + I+V+EY+++ L L G + + P +A LG
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 104 ASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTM 162
ASG+ +L A VHRD+ N L+ N KIGDFG+++ ++ + V +
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 163 GYLAPEYALLGQLTKKADVYSFGVLLLEIIS 193
++ PE + + T ++DV+SFGV+L EI +
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 96/202 (47%), Gaps = 19/202 (9%)
Query: 2 IGGGAFGVVYRGSLRDGT----QIAIKCL---SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+GGG VY L + T ++AIK + E ++ K F E+ + H N+V
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLG-TASGLSFLHEE 113
+I ED+ LV EY+E +L S+Y+ P + + T L +
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTL--------SEYIESHGPLSVDTAINFTNQILDGIKHA 127
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG 173
D IVHRDIK N+L+D N KI DFG+AK + + V GT+ Y +PE A
Sbjct: 128 HDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGE 187
Query: 174 QLTKKADVYSFGVLLLEIISGR 195
+ D+YS G++L E++ G
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGE 209
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 11/213 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G+FG VY+G + I + + + + F E+ ++ RH N++ +G +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
DN I V ++ E +SL L ++K+ +I TA G+ +LH + I+HR
Sbjct: 104 DNLAI-VTQWCEGSSLYKHLHVQETKFQMFQL---IDIARQTAQGMDYLHAKN---IIHR 156
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKLFPD-NVTHVSTRVAGTMGYLAPEYALL---GQLTK 177
D+K++N+ L KIGDFGLA + + + + G++ ++APE + +
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 178 KADVYSFGVLLLEIISGRSSSKAAFGDDMLILV 210
++DVYS+G++L E+++G D +I +
Sbjct: 217 QSDVYSYGIVLYELMTGELPYSHINNRDQIIFM 249
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 115/216 (53%), Gaps = 14/216 (6%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSAESKQGTKEF-LTEIDMIWNIRHPNLVQLIGCC 59
+G G + VY+G + G +A+K + +S++GT + EI ++ ++H N+V+L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 60 VEDNNRILVYEYLENN---SLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+N LV+E+++N+ + + +G+ + + L+ L GL+F HE
Sbjct: 73 HTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL--LQGLAFCHENK-- 128
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
I+HRD+K N+L++ K+GDFGLA+ F V S+ V T+ Y AP+ L+G T
Sbjct: 129 -ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAPD-VLMGSRT 185
Query: 177 KKA--DVYSFGVLLLEIISGRSSSKAAFGDDMLILV 210
D++S G +L E+I+G+ ++ L L+
Sbjct: 186 YSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 99/195 (50%), Gaps = 17/195 (8%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G FG V G R G ++A+KC+ ++ + FL E ++ +RH NLVQL+G VE
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 62 DNNRI-LVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
+ + +V EY+ SL + L S+ + V L L + +L VH
Sbjct: 86 EKGGLYIVTEYMAKGSLVD-YLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNN---FVH 140
Query: 121 RDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTM--GYLAPEYALLGQLTKK 178
RD+ A NVL+ + K+ DFGL K ST+ G + + APE + + K
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFSTK 194
Query: 179 ADVYSFGVLLLEIIS 193
+DV+SFG+LL EI S
Sbjct: 195 SDVWSFGILLWEIYS 209
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 99/199 (49%), Gaps = 15/199 (7%)
Query: 2 IGGGAFGVVYR-GSLRDGTQIAIKCLSAESKQGTKEFLTEID---MIWNIRHPNLVQLIG 57
+G G+FG V+ S +G A+K L E K+ D M+ + HP ++++ G
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ ++ +Y+E L + L S+ + A +CL L +LH +
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLA----LEYLHSKD--- 126
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
I++RD+K N+LLD N H KI DFG AK PD V+ + GT Y+APE K
Sbjct: 127 IIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDYIAPEVVSTKPYNK 182
Query: 178 KADVYSFGVLLLEIISGRS 196
D +SFG+L+ E+++G +
Sbjct: 183 SIDWWSFGILIYEMLAGYT 201
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 99/195 (50%), Gaps = 17/195 (8%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G FG V G R G ++A+KC+ ++ + FL E ++ +RH NLVQL+G VE
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 62 DNNRI-LVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
+ + +V EY+ SL + L S+ + V L L + +L VH
Sbjct: 71 EKGGLYIVTEYMAKGSLVD-YLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNN---FVH 125
Query: 121 RDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTM--GYLAPEYALLGQLTKK 178
RD+ A NVL+ + K+ DFGL K ST+ G + + APE + + K
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFSTK 179
Query: 179 ADVYSFGVLLLEIIS 193
+DV+SFG+LL EI S
Sbjct: 180 SDVWSFGILLWEIYS 194
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G FG V G R G ++A+KC+ ++ + FL E ++ +RH NLVQL+G VE
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 62 DNNRI-LVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
+ + +V EY+ SL + L + D L + +L VH
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD--CLLKFSLDVCEAMEYLEGNN---FVH 312
Query: 121 RDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTM--GYLAPEYALLGQLTKK 178
RD+ A NVL+ + K+ DFGL K ST+ G + + APE + + K
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFSTK 366
Query: 179 ADVYSFGVLLLEIIS 193
+DV+SFG+LL EI S
Sbjct: 367 SDVWSFGILLWEIYS 381
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 98/195 (50%), Gaps = 17/195 (8%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G FG V G R G ++A+KC+ ++ + FL E ++ +RH NLVQL+G VE
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 62 DNNRI-LVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
+ + +V EY+ SL + L S+ + V L L + +L VH
Sbjct: 77 EKGGLYIVTEYMAKGSLVD-YLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGNN---FVH 131
Query: 121 RDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTM--GYLAPEYALLGQLTKK 178
RD+ A NVL+ + K+ DFGL K ST+ G + + APE + K
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREAAFSTK 185
Query: 179 ADVYSFGVLLLEIIS 193
+DV+SFG+LL EI S
Sbjct: 186 SDVWSFGILLWEIYS 200
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 99/195 (50%), Gaps = 23/195 (11%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
+G G FG V+ + T++A+K + S + FL E +++ ++H LV+L +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK 248
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHR 121
+ I+ E++ SL + L + L P + A G++F+ + +HR
Sbjct: 249 EPIYIIT-EFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRN---YIHR 302
Query: 122 DIKASNVLLDGNFHPKIGDFGLAKL---FPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
D++A+N+L+ + KI DFGLA++ FP + + APE G T K
Sbjct: 303 DLRAANILVSASLVCKIADFGLARVGAKFP-------------IKWTAPEAINFGSFTIK 349
Query: 179 ADVYSFGVLLLEIIS 193
+DV+SFG+LL+EI++
Sbjct: 350 SDVWSFGILLMEIVT 364
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 112/205 (54%), Gaps = 31/205 (15%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAI-KCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+G GAFG VY+ ++ + +A K + +S++ ++++ EID++ + HPN+V+L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRAN----ICLGTASGLSFLHEEADP 116
+NN ++ E+ ++ +L L+ P + +C T L++LH D
Sbjct: 105 YENNLWILIEFCAGGAVDAVML-------ELERPLTESQIQVVCKQTLDALNYLH---DN 154
Query: 117 PIVHRDIKASNVL--LDGNFHPKIGDFGLAKLFPDNVTHVSTRVA--GTMGYLAPEYALL 172
I+HRD+KA N+L LDG+ K+ DFG++ N + R + GT ++APE ++
Sbjct: 155 KIIHRDLKAGNILFTLDGDI--KLADFGVSA---KNTRXIQRRDSFIGTPYWMAPE-VVM 208
Query: 173 GQLTK------KADVYSFGVLLLEI 191
+ +K KADV+S G+ L+E+
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 112/205 (54%), Gaps = 31/205 (15%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAI-KCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+G GAFG VY+ ++ + +A K + +S++ ++++ EID++ + HPN+V+L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRAN----ICLGTASGLSFLHEEADP 116
+NN ++ E+ ++ +L L+ P + +C T L++LH D
Sbjct: 105 YENNLWILIEFCAGGAVDAVML-------ELERPLTESQIQVVCKQTLDALNYLH---DN 154
Query: 117 PIVHRDIKASNVL--LDGNFHPKIGDFGLAKLFPDNVTHVSTRVA--GTMGYLAPEYALL 172
I+HRD+KA N+L LDG+ K+ DFG++ N + R + GT ++APE ++
Sbjct: 155 KIIHRDLKAGNILFTLDGDI--KLADFGVSA---KNTRTIQRRDSFIGTPYWMAPE-VVM 208
Query: 173 GQLTK------KADVYSFGVLLLEI 191
+ +K KADV+S G+ L+E+
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 111/205 (54%), Gaps = 31/205 (15%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAI-KCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+G GAFG VY+ ++ + +A K + +S++ ++++ EID++ + HPN+V+L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRAN----ICLGTASGLSFLHEEADP 116
+NN ++ E+ ++ +L L+ P + +C T L++LH D
Sbjct: 105 YENNLWILIEFCAGGAVDAVML-------ELERPLTESQIQVVCKQTLDALNYLH---DN 154
Query: 117 PIVHRDIKASNVL--LDGNFHPKIGDFGLAKLFPDNVTHVSTR--VAGTMGYLAPEYALL 172
I+HRD+KA N+L LDG+ K+ DFG++ N + R GT ++APE ++
Sbjct: 155 KIIHRDLKAGNILFTLDGDI--KLADFGVSA---KNTRXIQRRDXFIGTPYWMAPE-VVM 208
Query: 173 GQLTK------KADVYSFGVLLLEI 191
+ +K KADV+S G+ L+E+
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 14/217 (6%)
Query: 2 IGGGAFGVVYRGSLR---DGTQIAIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQLIG 57
+G G FG V +G R +AIK L K T+E + E ++ + +P +V+LIG
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
C + +LV E L L+G + + + A + + G+ +L E+
Sbjct: 78 VC-QAEALMLVMEMAGGGPLHKFLVGKREE---IPVSNVAELLHQVSMGMKYLEEKN--- 130
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYALLGQL 175
VHRD+ A NVLL + KI DFGL+K + ++ + R AG + + APE +
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 176 TKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVE 211
+ ++DV+S+GV + E +S G+ K G +++ +E
Sbjct: 191 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE 227
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 9/195 (4%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIK-CLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCC 59
IG G FG V+ G LR D T +A+K C +FL E ++ HPN+V+LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
+ +V E ++ L +++ L T + A+G+ +L + +
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFL---RTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT-MGYLAPEYALLGQLTKK 178
HRD+ A N L+ KI DFG+++ D V S + + + APE G+ + +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 179 ADVYSFGVLLLEIIS 193
+DV+SFG+LL E S
Sbjct: 296 SDVWSFGILLWETFS 310
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 9/195 (4%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIK-CLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCC 59
IG G FG V+ G LR D T +A+K C +FL E ++ HPN+V+LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
+ +V E ++ L +++ L T + A+G+ +L + +
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFL---RTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT-MGYLAPEYALLGQLTKK 178
HRD+ A N L+ KI DFG+++ D V S + + + APE G+ + +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 179 ADVYSFGVLLLEIIS 193
+DV+SFG+LL E S
Sbjct: 296 SDVWSFGILLWETFS 310
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 132/281 (46%), Gaps = 21/281 (7%)
Query: 2 IGGGAFGVV---YRGSLRDGT--QIAIKCLSAES-KQGTKEFLTEIDMIWNIRHPNLVQL 55
+G G FG V DGT +A+K L A+ Q + EID++ + H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 56 IGCCVEDNNRIL--VYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE 113
GCC + + L V EY+ SL + L L + IC G+++LH +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQ-QIC----EGMAYLHSQ 136
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAG--TMGYLAPEYAL 171
+HR++ A NVLLD + KIGDFGLAK P+ + R G + + APE
Sbjct: 137 H---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 172 LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDP-EL 230
+ +DV+SFGV L E+++ SS++ L L+ RL E+++ E
Sbjct: 194 EYKFYYASDVWSFGVTLYELLTHCDSSQSP-PTKFLELIGIAQGQMTVLRLTELLERGER 252
Query: 231 TQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
P+K + C + A +RPT + ++ +L K VH
Sbjct: 253 LPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPIL-KTVH 292
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 48/298 (16%)
Query: 2 IGGGAFGVVYR----GSLRDG----TQIAIKCLSAE-SKQGTKEFLTEIDMIWNI-RHPN 51
+G GAFG V G +D T++A+K L ++ +++ + ++E++M+ I +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 52 LVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRAN------------I 99
++ L+G C +D ++ EY +L L + + + N
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G+ +L A +HRD+ A NVL+ + KI DFGLA+ ++ H+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDXXKK 208
Query: 160 GTMG-----YLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTW 214
T G ++APE T ++DV+SFGVLL EI + S + VE +
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG------VPVEELF 262
Query: 215 KLREEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHL 272
KL +EG ++ P + C A RPT KQ+VE L + V L
Sbjct: 263 KLLKEGHRMDK--------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 132/281 (46%), Gaps = 21/281 (7%)
Query: 2 IGGGAFGVV---YRGSLRDGT--QIAIKCLSAES-KQGTKEFLTEIDMIWNIRHPNLVQL 55
+G G FG V DGT +A+K L A+ Q + EID++ + H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 56 IGCCVEDNNRIL--VYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE 113
GCC + + L V EY+ SL + L L + IC G+++LH +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQ-QIC----EGMAYLHAQ 136
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAG--TMGYLAPEYAL 171
+HR++ A NVLLD + KIGDFGLAK P+ + R G + + APE
Sbjct: 137 H---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 172 LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDP-EL 230
+ +DV+SFGV L E+++ SS++ L L+ RL E+++ E
Sbjct: 194 EYKFYYASDVWSFGVTLYELLTHCDSSQSP-PTKFLELIGIAQGQMTVLRLTELLERGER 252
Query: 231 TQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
P+K + C + A +RPT + ++ +L K VH
Sbjct: 253 LPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPIL-KTVH 292
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 11/209 (5%)
Query: 2 IGGGAFGVVYRGS-LRDGTQIAIK---CLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIG 57
IG G F VYR + L DG +A+K + + + EID++ + HPN+++
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+EDN +V E + L+ + K + + T + S L +H
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR--- 156
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK +NV + K+GD GL + F T + V GT Y++PE
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERIHENGYNF 215
Query: 178 KADVYSFGVLLLEIISGRSSSKAAFGDDM 206
K+D++S G LL E+ + +S +GD M
Sbjct: 216 KSDIWSLGCLLYEMAALQS---PFYGDKM 241
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 2 IGGGAFGVVYRGSL------RDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+G GAFG V+ +D +A+K L S+ ++F E +++ ++H ++V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 56 IGCCVEDNNRILVYEYLENNSLANALL--GSKSKYVS---------LDWPTRANICLGTA 104
G C E ++V+EY+ + L L G +K ++ L + A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 105 SGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMG 163
+G+ +L A VHRD+ N L+ KIGDFG+++ ++ + V R +
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 164 YLAPEYALLGQLTKKADVYSFGVLLLEIIS 193
++ PE L + T ++DV+SFGV+L EI +
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 2 IGGGAFGVVYRGSL------RDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+G GAFG V+ +D +A+K L S+ ++F E +++ ++H ++V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 56 IGCCVEDNNRILVYEYLENNSLANALL--GSKSKYVS---------LDWPTRANICLGTA 104
G C E ++V+EY+ + L L G +K ++ L + A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 105 SGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMG 163
+G+ +L A VHRD+ N L+ KIGDFG+++ ++ + V R +
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 164 YLAPEYALLGQLTKKADVYSFGVLLLEIIS 193
++ PE L + T ++DV+SFGV+L EI +
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 135/285 (47%), Gaps = 29/285 (10%)
Query: 2 IGGGAFGVVY---RGSLRDGT--QIAIKCLSAES-KQGTKEFLTEIDMIWNIRHPNLVQL 55
+G G FG V DGT +A+K L A++ Q + EID++ + H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 56 IGCCVEDNNRI---LVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHE 112
GCC ED LV EY+ SL + L L + IC G+++LH
Sbjct: 99 KGCC-EDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQ-QIC----EGMAYLHA 152
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAG--TMGYLAPEYA 170
+ +HRD+ A NVLLD + KIGDFGLAK P+ R G + + APE
Sbjct: 153 QH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECL 209
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDP-E 229
+ +DV+SFGV L E+++ SS++ L L+ RL E+++ E
Sbjct: 210 KEYKFYYASDVWSFGVTLYELLTHCDSSQSP-PTKFLELIGIAQGQMTVLRLTELLERGE 268
Query: 230 LTQFPEK---EVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
P+K EV +K C + A +RPT + ++ +L K VH
Sbjct: 269 RLPRPDKCPAEVYHLMKN---CWETEASFRPTFENLIPIL-KTVH 309
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 48/298 (16%)
Query: 2 IGGGAFGVVY--------RGSLRDGTQIAIKCLSAE-SKQGTKEFLTEIDMIWNI-RHPN 51
+G GAFG V + T++A+K L ++ +++ + ++E++M+ I +H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 52 LVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRAN------------I 99
++ L+G C +D ++ EY +L L + + + N
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G+ +L A +HRD+ A NVL+ + KI DFGLA+ ++ H+
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 197
Query: 160 GTMG-----YLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTW 214
T G ++APE T ++DV+SFGVLL EI + S + VE +
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG------VPVEELF 251
Query: 215 KLREEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHL 272
KL +EG ++ P + C A RPT KQ+VE L + V L
Sbjct: 252 KLLKEGHRMDK--------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 301
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 108/217 (49%), Gaps = 14/217 (6%)
Query: 2 IGGGAFGVVYRGSLR---DGTQIAIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQLIG 57
+G G FG V +G R +AIK L K T+E + E ++ + +P +V+LIG
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
C + +LV E L L+G + + + A + + G+ +L E+
Sbjct: 404 VC-QAEALMLVMEMAGGGPLHKFLVGKREE---IPVSNVAELLHQVSMGMKYLEEKN--- 456
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAG--TMGYLAPEYALLGQL 175
VHR++ A NVLL + KI DFGL+K + ++ + R AG + + APE +
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 516
Query: 176 TKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVE 211
+ ++DV+S+GV + E +S G+ K G +++ +E
Sbjct: 517 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE 553
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 48/298 (16%)
Query: 2 IGGGAFGVVY--------RGSLRDGTQIAIKCLSAE-SKQGTKEFLTEIDMIWNI-RHPN 51
+G GAFG V + T++A+K L ++ +++ + ++E++M+ I +H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 52 LVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRAN------------I 99
++ L+G C +D ++ EY +L L + + + N
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G+ +L A +HRD+ A NVL+ + KI DFGLA+ ++ H+
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 200
Query: 160 GTMG-----YLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTW 214
T G ++APE T ++DV+SFGVLL EI + S + VE +
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG------VPVEELF 254
Query: 215 KLREEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHL 272
KL +EG ++ P + C A RPT KQ+VE L + V L
Sbjct: 255 KLLKEGHRMDK--------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 304
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 136/292 (46%), Gaps = 47/292 (16%)
Query: 2 IGGGAFGVVYRGSLRD------GTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FG+VY G+ RD T++A+K ++ + S + EFL E ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRA--------NICLGTASG 106
L+G + ++V E + + L + L + + + + P R + A G
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE--AENNPGRPPPTLQEMIQMAAEIADG 142
Query: 107 LSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--- 163
+++L+ + VHRD+ A N ++ +F KIGDFG+ + ++ G G
Sbjct: 143 MAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLP 195
Query: 164 --YLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGR 221
++APE G T +D++SFGV+L EI S ++ ++ K +G
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL------KFVMDGG 249
Query: 222 LLEIVDPELTQFPEK--EVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
L+ D PE+ ++MR C Q + RPT ++V +L D+H
Sbjct: 250 YLDQPD----NCPERVTDLMR------MCWQFNPNMRPTFLEIVNLLKDDLH 291
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 48/298 (16%)
Query: 2 IGGGAFGVVYR----GSLRDG----TQIAIKCLSAE-SKQGTKEFLTEIDMIWNI-RHPN 51
+G GAFG V G +D T++A+K L ++ +++ + ++E++M+ I +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 52 LVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRAN------------I 99
++ L+G C +D ++ EY +L L + + + N
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G+ +L A +HRD+ A NVL+ + KI DFGLA+ ++ H+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 208
Query: 160 GTMG-----YLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTW 214
T G ++APE T ++DV+SFGVLL EI + S + VE +
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG------VPVEELF 262
Query: 215 KLREEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHL 272
KL +EG ++ P + C A RPT KQ+VE L + V L
Sbjct: 263 KLLKEGHRMDK--------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 48/298 (16%)
Query: 2 IGGGAFGVVYR----GSLRDG----TQIAIKCLSAE-SKQGTKEFLTEIDMIWNI-RHPN 51
+G GAFG V G +D T++A+K L ++ +++ + ++E++M+ I +H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 52 LVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRAN------------I 99
++ L+G C +D ++ EY +L L + + + N
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G+ +L A +HRD+ A NVL+ + KI DFGLA+ ++ H+
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 249
Query: 160 GTMG-----YLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTW 214
T G ++APE T ++DV+SFGVLL EI + S + VE +
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG------VPVEELF 303
Query: 215 KLREEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHL 272
KL +EG ++ P + C A RPT KQ+VE L + V L
Sbjct: 304 KLLKEGHRMDK--------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 353
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 2 IGGGAFGVVYRGSL------RDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+G GAFG V+ +D +A+K L S+ ++F E +++ ++H ++V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 56 IGCCVEDNNRILVYEYLENNSLANALL--GSKSKYVS---------LDWPTRANICLGTA 104
G C E ++V+EY+ + L L G +K ++ L + A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 105 SGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMG 163
+G+ +L A VHRD+ N L+ KIGDFG+++ ++ + V R +
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 164 YLAPEYALLGQLTKKADVYSFGVLLLEIIS 193
++ PE L + T ++DV+SFGV+L EI +
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 48/298 (16%)
Query: 2 IGGGAFGVVY--------RGSLRDGTQIAIKCLSAE-SKQGTKEFLTEIDMIWNI-RHPN 51
+G GAFG V + T++A+K L ++ +++ + ++E++M+ I +H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 52 LVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRAN------------I 99
++ L+G C +D ++ EY +L L + + + N
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G+ +L A +HRD+ A NVL+ + KI DFGLA+ ++ H+
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 201
Query: 160 GTMG-----YLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTW 214
T G ++APE T ++DV+SFGVLL EI + S + VE +
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG------VPVEELF 255
Query: 215 KLREEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHL 272
KL +EG ++ P + C A RPT KQ+VE L + V L
Sbjct: 256 KLLKEGHRMDK--------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 305
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 135/292 (46%), Gaps = 47/292 (16%)
Query: 2 IGGGAFGVVYRGSLRD------GTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FG+VY G+ RD T++A+K ++ + S + EFL E ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRA--------NICLGTASG 106
L+G + ++V E + + L + L + + + + P R + A G
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE--AENNPGRPPPTLQEMIQMAAEIADG 142
Query: 107 LSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--- 163
+++L+ + VHRD+ A N ++ +F KIGDFG+ + ++ G G
Sbjct: 143 MAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLP 195
Query: 164 --YLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGR 221
++APE G T +D++SFGV+L EI S ++ ++ K +G
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL------KFVMDGG 249
Query: 222 LLEIVDPELTQFPEK--EVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
L+ D PE+ ++MR C Q RPT ++V +L D+H
Sbjct: 250 YLDQPD----NCPERVTDLMR------MCWQFNPKMRPTFLEIVNLLKDDLH 291
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 14/200 (7%)
Query: 1 MIGGGAFGVVYRGS-LRDGTQI----AIKCLSAE-SKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + DG + AIK L S + KE L E ++ + P + +
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L+G C+ + LV + + L + + ++ + S D N C+ A G+S+L
Sbjct: 84 LLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDL---LNWCMQIAKGMSYLE--- 136
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYALLG 173
D +VHRD+ A NVL+ H KI DFGLA+L D + + + ++A E L
Sbjct: 137 DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRR 196
Query: 174 QLTKKADVYSFGVLLLEIIS 193
+ T ++DV+S+GV + E+++
Sbjct: 197 RFTHQSDVWSYGVTVWELMT 216
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 48/298 (16%)
Query: 2 IGGGAFGVVYR----GSLRDG----TQIAIKCLSAE-SKQGTKEFLTEIDMIWNI-RHPN 51
+G GAFG V G +D T++A+K L ++ +++ + ++E++M+ I +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 52 LVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRAN------------I 99
++ L+G C +D ++ EY +L L + + + N
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G+ +L A +HRD+ A NVL+ + KI DFGLA+ ++ H+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 208
Query: 160 GTMG-----YLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTW 214
T G ++APE T ++DV+SFGVLL EI + S + VE +
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG------VPVEELF 262
Query: 215 KLREEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHL 272
KL +EG ++ P + C A RPT KQ+VE L + V L
Sbjct: 263 KLLKEGHRMDK--------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 135/292 (46%), Gaps = 47/292 (16%)
Query: 2 IGGGAFGVVYRGSLRD------GTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FG+VY G+ RD T++A+K ++ + S + EFL E ++ ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRA--------NICLGTASG 106
L+G + ++V E + + L + L + + + + P R + A G
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE--AENNPGRPPPTLQEMIQMAAEIADG 139
Query: 107 LSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--- 163
+++L+ + VHRD+ A N ++ +F KIGDFG+ + ++ G G
Sbjct: 140 MAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLP 192
Query: 164 --YLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGR 221
++APE G T +D++SFGV+L EI S ++ ++ K +G
Sbjct: 193 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL------KFVMDGG 246
Query: 222 LLEIVDPELTQFPEK--EVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
L+ D PE+ ++MR C Q RPT ++V +L D+H
Sbjct: 247 YLDQPD----NCPERVTDLMR------MCWQFNPKMRPTFLEIVNLLKDDLH 288
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 8/199 (4%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAES-KQGTKEFL-TEIDMIWNIRHPNLVQLIGC 58
IG G++G + + DG + K L S + K+ L +E++++ ++HPN+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 59 CVEDNNRIL--VYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD- 115
++ N L V EY E LA+ + + LD + L H +D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 116 -PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
++HRD+K +NV LDG + K+GDFGLA++ + + T V GT Y++PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRMS 192
Query: 175 LTKKADVYSFGVLLLEIIS 193
+K+D++S G LL E+ +
Sbjct: 193 YNEKSDIWSLGCLLYELCA 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 19/219 (8%)
Query: 2 IGGGAFGVV---YRGSLRD--GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V L+D G +A+K L +++ ++F EI+++ +++H N+V+
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 57 GCCVEDNNR--ILVYEYLENNSLANALLGSKSK--YVSLDWPTRANICLGTASGLSFLHE 112
G C R L+ EYL SL + L K + ++ L T + IC G+ +L
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEYLGT 136
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYA 170
+ +HRD+ N+L++ KIGDFGL K+ P + + G + + APE
Sbjct: 137 KR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
+ + +DV+SFGV+L E+ + SK+ + M ++
Sbjct: 194 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 232
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 130/298 (43%), Gaps = 48/298 (16%)
Query: 2 IGGGAFGVVY--------RGSLRDGTQIAIKCLSAE-SKQGTKEFLTEIDMIWNI-RHPN 51
+G GAFG V + T++A+K L ++ +++ + ++E++M+ I +H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 52 LVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRAN------------I 99
++ L+G C +D ++ EY +L L + + + N
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G+ +L A +HRD+ A NVL+ + KI DFGLA+ ++ H+
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 193
Query: 160 GTMG-----YLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTW 214
T G ++APE T ++DV+SFGVLL EI + S + VE +
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG------VPVEELF 247
Query: 215 KLREEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHL 272
KL +EG ++ P + C A RPT KQ+VE L + V L
Sbjct: 248 KLLKEGHRMDK--------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 297
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 2 IGGGAFGVV---YRGSLRD--GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V L+D G +A+K L +++ ++F EI+++ +++H N+V+
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 57 GCCVEDNNR--ILVYEYLENNSLANALLGSKSK--YVSLDWPTRANICLGTASGLSFLHE 112
G C R L+ EYL SL + L K + ++ L T + IC G+ +L
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEYL-- 161
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYA 170
+HRD+ N+L++ KIGDFGL K+ P + + G + + APE
Sbjct: 162 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 220
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
+ + +DV+SFGV+L E+ + SK+ + M ++
Sbjct: 221 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 259
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 2 IGGGAFGVV---YRGSLRD--GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V L+D G +A+K L +++ ++F EI+++ +++H N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 57 GCCVEDNNR--ILVYEYLENNSLANALLGSKSK--YVSLDWPTRANICLGTASGLSFLHE 112
G C R L+ EYL SL + L K + ++ L T + IC G+ +L
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEYL-- 130
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYA 170
+HRD+ N+L++ KIGDFGL K+ P + + G + + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
+ + +DV+SFGV+L E+ + SK+ + M ++
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 228
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 133/287 (46%), Gaps = 37/287 (12%)
Query: 2 IGGGAFGVVYRGSLRD------GTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FG+VY G+ RD T++A+K ++ + S + EFL E ++ ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRA--------NICLGTASG 106
L+G + ++V E + + L + L + + + + P R + A G
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE--AENNPGRPPPTLQEMIQMAAEIADG 141
Query: 107 LSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYL 165
+++L+ + VHRD+ A N ++ +F KIGDFG+ + ++ + + + ++
Sbjct: 142 MAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 166 APEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWK-LREEGRLLE 224
APE G T +D++SFGV+L EI S L E ++ L E L
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKF 243
Query: 225 IVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
++D P+ R + C Q RPT ++V +L D+H
Sbjct: 244 VMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH 290
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 2 IGGGAFGVV---YRGSLRD--GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V L+D G +A+K L +++ ++F EI+++ +++H N+V+
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 57 GCCVEDNNR--ILVYEYLENNSLANALLGSKSK--YVSLDWPTRANICLGTASGLSFLHE 112
G C R L+ EYL SL + L K + ++ L T + IC G+ +L
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEYL-- 129
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYA 170
+HRD+ N+L++ KIGDFGL K+ P + + G + + APE
Sbjct: 130 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
+ + +DV+SFGV+L E+ + SK+ + M ++
Sbjct: 189 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 227
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 132/298 (44%), Gaps = 48/298 (16%)
Query: 2 IGGGAFGVVYR----GSLRDG----TQIAIKCLSAE-SKQGTKEFLTEIDMIWNI-RHPN 51
+G GAFG V G +D T++A+K L ++ +++ + ++E++M+ I +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 52 LVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRAN------------I 99
++ L+G C +D ++ EY +L L + + + N
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G+ +L A +HRD+ A NVL+ + KI DFGLA+ ++ H+
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 208
Query: 160 GTMG-----YLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTW 214
T G ++APE T ++DV+SFGVLL EI + S + VE +
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG------VPVEELF 262
Query: 215 KLREEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHL 272
KL +EG ++ P + C A RPT KQ+VE L + V L
Sbjct: 263 KLLKEGHRMDK--------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 2 IGGGAFGVV---YRGSLRD--GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V L+D G +A+K L +++ ++F EI+++ +++H N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 57 GCCVEDNNR--ILVYEYLENNSLANALLGSKSK--YVSLDWPTRANICLGTASGLSFLHE 112
G C R L+ EYL SL + L K + ++ L T + IC G+ +L
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEYL-- 130
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYA 170
+HRD+ N+L++ KIGDFGL K+ P + + G + + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
+ + +DV+SFGV+L E+ + SK+ + M ++
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 228
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 2 IGGGAFGVV---YRGSLRD--GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V L+D G +A+K L +++ ++F EI+++ +++H N+V+
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 57 GCCVEDNNR--ILVYEYLENNSLANALLGSKSK--YVSLDWPTRANICLGTASGLSFLHE 112
G C R L+ EYL SL + L K + ++ L T + IC G+ +L
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEYL-- 128
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYA 170
+HRD+ N+L++ KIGDFGL K+ P + + G + + APE
Sbjct: 129 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
+ + +DV+SFGV+L E+ + SK+ + M ++
Sbjct: 188 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 226
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 127/291 (43%), Gaps = 42/291 (14%)
Query: 2 IGGGAFGVVY--------RGSLRDGTQIAIKCLSAE-SKQGTKEFLTEIDMIWNI-RHPN 51
+G GAFG V + ++ +A+K L + +++ + ++E++M+ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 52 LVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR------------ANI 99
++ L+G C +D ++ EY +L L + + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G+ +L A +HRD+ A NVL+ N KI DFGLA+ +N+ +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKNTTN 218
Query: 160 GTM--GYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLR 217
G + ++APE T ++DV+SFGVL+ EI + S I VE +KL
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG------IPVEELFKLL 272
Query: 218 EEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
+EG ++ P + C A RPT KQ+VE L +
Sbjct: 273 KEGHRMDK--------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 127/291 (43%), Gaps = 42/291 (14%)
Query: 2 IGGGAFGVVY--------RGSLRDGTQIAIKCLSAE-SKQGTKEFLTEIDMIWNI-RHPN 51
+G GAFG V + ++ +A+K L + +++ + ++E++M+ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 52 LVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR------------ANI 99
++ L+G C +D ++ EY +L L + + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G+ +L A +HRD+ A NVL+ N KI DFGLA+ +N+ +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 218
Query: 160 GTM--GYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLR 217
G + ++APE T ++DV+SFGVL+ EI + S I VE +KL
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG------IPVEELFKLL 272
Query: 218 EEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
+EG ++ P + C A RPT KQ+VE L +
Sbjct: 273 KEGHRMDK--------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 136/288 (47%), Gaps = 39/288 (13%)
Query: 2 IGGGAFGVVYRGSLRD------GTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FG+VY G+ RD T++A+K ++ + S + EFL E ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRA--------NICLGTASG 106
L+G + ++V E + + L + L + + + + P R + A G
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE--AENNPGRPPPTLQEMIQMAAEIADG 142
Query: 107 LSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYL 165
+++L+ + VHRD+ A N ++ +F KIGDFG+ + ++ + + + ++
Sbjct: 143 MAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 166 APEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEI 225
APE G T +D++SFGV+L EI S ++ ++ K +G L+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL------KFVMDGGYLDQ 253
Query: 226 VDPELTQFPEK--EVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
D PE+ ++MR C Q RPT ++V +L D+H
Sbjct: 254 PD----NCPERVTDLMR------MCWQFNPKMRPTFLEIVNLLKDDLH 291
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 2 IGGGAFGVV---YRGSLRD--GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V L+D G +A+K L +++ ++F EI+++ +++H N+V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 57 GCCVEDNNR--ILVYEYLENNSLANALLGSKSK--YVSLDWPTRANICLGTASGLSFLHE 112
G C R L+ EYL SL + L K + ++ L T + IC G+ +L
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEYL-- 148
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYA 170
+HRD+ N+L++ KIGDFGL K+ P + + G + + APE
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
+ + +DV+SFGV+L E+ + SK+ + M ++
Sbjct: 208 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 246
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 2 IGGGAFGVV---YRGSLRD--GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V L+D G +A+K L +++ ++F EI+++ +++H N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 57 GCCVEDNNR--ILVYEYLENNSLANALLGSKSK--YVSLDWPTRANICLGTASGLSFLHE 112
G C R L+ EYL SL + L K + ++ L T + IC G+ +L
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEYL-- 130
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYA 170
+HRD+ N+L++ KIGDFGL K+ P + + G + + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
+ + +DV+SFGV+L E+ + SK+ + M ++
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 228
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 136/292 (46%), Gaps = 47/292 (16%)
Query: 2 IGGGAFGVVYRGSLRD------GTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FG+VY G+ RD T++A+K ++ + S + EFL E ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRA--------NICLGTASG 106
L+G + ++V E + + L + L + + + + P R + A G
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE--AENNPGRPPPTLQEMIQMAAEIADG 142
Query: 107 LSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG--- 163
+++L+ + VHRD+ A N ++ +F KIGDFG+ + ++ + G G
Sbjct: 143 MAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETAYYRKGGKGLLP 195
Query: 164 --YLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGR 221
++APE G T +D++SFGV+L EI S ++ ++ K +G
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL------KFVMDGG 249
Query: 222 LLEIVDPELTQFPEK--EVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
L+ D PE+ ++MR C Q RPT ++V +L D+H
Sbjct: 250 YLDQPD----NCPERVTDLMR------MCWQFNPKMRPTFLEIVNLLKDDLH 291
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 2 IGGGAFGVV---YRGSLRD--GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V L+D G +A+K L +++ ++F EI+++ +++H N+V+
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 57 GCCVEDNNR--ILVYEYLENNSLANALLGSKSK--YVSLDWPTRANICLGTASGLSFLHE 112
G C R L+ EYL SL + L K + ++ L T + IC G+ +L
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEYL-- 135
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYA 170
+HRD+ N+L++ KIGDFGL K+ P + + G + + APE
Sbjct: 136 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 194
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
+ + +DV+SFGV+L E+ + SK+ + M ++
Sbjct: 195 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 233
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 2 IGGGAFGVV---YRGSLRD--GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V L+D G +A+K L +++ ++F EI+++ +++H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 57 GCCVEDNNR--ILVYEYLENNSLANALLGSKSK--YVSLDWPTRANICLGTASGLSFLHE 112
G C R L+ EYL SL + L K + ++ L T + IC G+ +L
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEYL-- 133
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYA 170
+HRD+ N+L++ KIGDFGL K+ P + + G + + APE
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
+ + +DV+SFGV+L E+ + SK+ + M ++
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 231
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 127/291 (43%), Gaps = 42/291 (14%)
Query: 2 IGGGAFGVVY--------RGSLRDGTQIAIKCLSAE-SKQGTKEFLTEIDMIWNI-RHPN 51
+G GAFG V + ++ +A+K L + +++ + ++E++M+ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 52 LVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR------------ANI 99
++ L+G C +D ++ EY +L L + + + +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G+ +L A +HRD+ A NVL+ N KI DFGLA+ +N+ +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 218
Query: 160 GTM--GYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLR 217
G + ++APE T ++DV+SFGVL+ EI + S I VE +KL
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG------IPVEELFKLL 272
Query: 218 EEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
+EG ++ P + C A RPT KQ+VE L +
Sbjct: 273 KEGHRMDK--------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 2 IGGGAFGVV---YRGSLRD--GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V L+D G +A+K L +++ ++F EI+++ +++H N+V+
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 57 GCCVEDNNR--ILVYEYLENNSLANALLGSKSK--YVSLDWPTRANICLGTASGLSFLHE 112
G C R L+ EYL SL + L K + ++ L T + IC G+ +L
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEYL-- 136
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYA 170
+HRD+ N+L++ KIGDFGL K+ P + + G + + APE
Sbjct: 137 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 195
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
+ + +DV+SFGV+L E+ + SK+ + M ++
Sbjct: 196 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 234
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 2 IGGGAFGVV---YRGSLRD--GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V L+D G +A+K L +++ ++F EI+++ +++H N+V+
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 57 GCCVEDNNR--ILVYEYLENNSLANALLGSKSK--YVSLDWPTRANICLGTASGLSFLHE 112
G C R L+ EYL SL + L K + ++ L T + IC G+ +L
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEYL-- 137
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYA 170
+HRD+ N+L++ KIGDFGL K+ P + + G + + APE
Sbjct: 138 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 196
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
+ + +DV+SFGV+L E+ + SK+ + M ++
Sbjct: 197 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 235
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 2 IGGGAFGVV---YRGSLRD--GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V L+D G +A+K L +++ ++F EI+++ +++H N+V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 57 GCCVEDNNR--ILVYEYLENNSLANALLGSKSK--YVSLDWPTRANICLGTASGLSFLHE 112
G C R L+ EYL SL + L K + ++ L T + IC G+ +L
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEYL-- 148
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYA 170
+HRD+ N+L++ KIGDFGL K+ P + + G + + APE
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
+ + +DV+SFGV+L E+ + SK+ + M ++
Sbjct: 208 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 246
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 17/216 (7%)
Query: 2 IGGGAFG-VVYRGSLRDGTQIAIK--CLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G+FG + S DG Q IK +S S + +E E+ ++ N++HPN+VQ
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVS----LDWPTRANICLGTASGLSFLHEEA 114
E+ + +V +Y E L + K LDW + ICL L +H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQ--ICLA----LKHVH--- 142
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
D I+HRDIK+ N+ L + ++GDFG+A++ ++ ++ GT YL+PE
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL-NSTVELARACIGTPYYLSPEICENKP 201
Query: 175 LTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILV 210
K+D+++ G +L E+ + + + +A ++++ +
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI 237
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 127/291 (43%), Gaps = 42/291 (14%)
Query: 2 IGGGAFGVVY--------RGSLRDGTQIAIKCLSAE-SKQGTKEFLTEIDMIWNI-RHPN 51
+G GAFG V + ++ +A+K L + +++ + ++E++M+ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 52 LVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR------------ANI 99
++ L+G C +D ++ EY +L L + + + +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G+ +L A +HRD+ A NVL+ N KI DFGLA+ +N+ +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 218
Query: 160 GTM--GYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLR 217
G + ++APE T ++DV+SFGVL+ EI + S I VE +KL
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG------IPVEELFKLL 272
Query: 218 EEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
+EG ++ P + C A RPT KQ+VE L +
Sbjct: 273 KEGHRMDK--------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 110/219 (50%), Gaps = 19/219 (8%)
Query: 2 IGGGAFGVV---YRGSLRD--GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V L+D G +A+K L +++ ++F EI+++ +++H N+V+
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 57 GCCVEDNNR--ILVYEYLENNSLANALLGSKSK--YVSLDWPTRANICLGTASGLSFLHE 112
G C R L+ EYL SL + L K + ++ L T + IC G+ +L
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEYL-- 131
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYA 170
+HR++ N+L++ KIGDFGL K+ P + + + G + + APE
Sbjct: 132 -GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 190
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
+ + +DV+SFGV+L E+ + SK+ + M ++
Sbjct: 191 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 229
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 114/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GLSF H
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLSFCHSHR 123
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V + V T+ Y APE LLG
Sbjct: 124 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE-ILLGC 178
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 233
Query: 233 FPE 235
P+
Sbjct: 234 MPD 236
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 20/203 (9%)
Query: 1 MIGGGAFGVVYRGS-LRDG----TQIAIKCLSAES-KQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G +AIK L+ + + EF+ E ++ ++ HP+LV+
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 104
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVS---LDWPTRANICLGTASGLSFLH 111
L+G C+ + LV + + + L + K S L+W C+ A G+ +L
Sbjct: 105 LLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLE 157
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYA 170
E +VHRD+ A NVL+ H KI DFGLA+L D + + + ++A E
Sbjct: 158 ERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 214
Query: 171 LLGQLTKKADVYSFGVLLLEIIS 193
+ T ++DV+S+GV + E+++
Sbjct: 215 HYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 106/200 (53%), Gaps = 16/200 (8%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQG--TKEFLTEIDMIWNIRHPNLVQLIG 57
M+G G+FG V + R Q A+K ++ S + T L E++++ + HPN+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ ++ +V E L + ++ K ++ D A I SG++++H+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHD---AARIIKQVFSGITYMHKHN--- 141
Query: 118 IVHRDIKASNVLLDG---NFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
IVHRD+K N+LL+ + KI DFGL+ F N T + R+ GT Y+APE L G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRGT 198
Query: 175 LTKKADVYSFGVLLLEIISG 194
+K DV+S GV+L ++SG
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 105/200 (52%), Gaps = 26/200 (13%)
Query: 5 GAFGVVYRGSLRDGTQIAI-KCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVEDN 63
G FG VY+ ++ + +A K + +S++ ++++ EID++ + HPN+V+L+ +N
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 64 NRILVYEYLENNSLANALLGSKSKYVSLDWPTRAN----ICLGTASGLSFLHEEADPPIV 119
N ++ E+ ++ +L L+ P + +C T L++LH D I+
Sbjct: 81 NLWILIEFCAGGAVDAVML-------ELERPLTESQIQVVCKQTLDALNYLH---DNKII 130
Query: 120 HRDIKASNVL--LDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
HRD+KA N+L LDG+ K+ DFG++ GT ++APE ++ + +K
Sbjct: 131 HRDLKAGNILFTLDGDI--KLADFGVSAKNTRTXIQRRDSFIGTPYWMAPE-VVMCETSK 187
Query: 178 ------KADVYSFGVLLLEI 191
KADV+S G+ L+E+
Sbjct: 188 DRPYDYKADVWSLGITLIEM 207
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 8/199 (4%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAES-KQGTKEFL-TEIDMIWNIRHPNLVQLIGC 58
IG G++G + + DG + K L S + K+ L +E++++ ++HPN+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 59 CVEDNNRIL--VYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD- 115
++ N L V EY E LA+ + + LD + L H +D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 116 -PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
++HRD+K +NV LDG + K+GDFGLA++ ++ T + GT Y++PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDTSFAKAFVGTPYYMSPEQMNRMS 192
Query: 175 LTKKADVYSFGVLLLEIIS 193
+K+D++S G LL E+ +
Sbjct: 193 YNEKSDIWSLGCLLYELCA 211
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 137/288 (47%), Gaps = 39/288 (13%)
Query: 2 IGGGAFGVVYRGSLRD------GTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FG+VY G+ RD T++A+K ++ + S + EFL E ++ ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRA--------NICLGTASG 106
L+G + ++V E + + L + L + + + + P R + A G
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE--AENNPGRPPPTLQEMIQMAAEIADG 142
Query: 107 LSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYL 165
+++L+ + VHR++ A N ++ +F KIGDFG+ + ++ + + + ++
Sbjct: 143 MAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 166 APEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEI 225
APE G T +D++SFGV+L EI S ++ ++ K +G L+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL------KFVMDGGYLDQ 253
Query: 226 VDPELTQFPEK--EVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
D PE+ ++MR C Q + RPT ++V +L D+H
Sbjct: 254 PD----NCPERVTDLMR------MCWQFNPNMRPTFLEIVNLLKDDLH 291
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 106/200 (53%), Gaps = 16/200 (8%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQG--TKEFLTEIDMIWNIRHPNLVQLIG 57
M+G G+FG V + R Q A+K ++ S + T L E++++ + HPN+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ ++ +V E L + ++ K ++ D A I SG++++H+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHD---AARIIKQVFSGITYMHKHN--- 141
Query: 118 IVHRDIKASNVLLDG---NFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
IVHRD+K N+LL+ + KI DFGL+ F N T + R+ GT Y+APE L G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRGT 198
Query: 175 LTKKADVYSFGVLLLEIISG 194
+K DV+S GV+L ++SG
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 10/194 (5%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG GA G VY + G ++AI+ ++ + + + + EI ++ ++PN+V + +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
+ +V EYL SL + + + +D A +C L FLH ++H
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSNQ---VIH 139
Query: 121 RDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKAD 180
RDIK+ N+LL + K+ DFG + ST V GT ++APE K D
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVD 198
Query: 181 VYSFGVLLLEIISG 194
++S G++ +E+I G
Sbjct: 199 IWSLGIMAIEMIEG 212
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 137/288 (47%), Gaps = 39/288 (13%)
Query: 2 IGGGAFGVVYRGSLRD------GTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FG+VY G+ RD T++A+K ++ + S + EFL E ++ ++V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRA--------NICLGTASG 106
L+G + ++V E + + L + L + + + + P R + A G
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE--AENNPGRPPPTLQEMIQMAAEIADG 143
Query: 107 LSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYL 165
+++L+ + VHR++ A N ++ +F KIGDFG+ + ++ + + + ++
Sbjct: 144 MAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 166 APEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEI 225
APE G T +D++SFGV+L EI S ++ ++ K +G L+
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL------KFVMDGGYLDQ 254
Query: 226 VDPELTQFPEK--EVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
D PE+ ++MR C Q + RPT ++V +L D+H
Sbjct: 255 PD----NCPERVTDLMR------MCWQFNPNMRPTFLEIVNLLKDDLH 292
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 132/302 (43%), Gaps = 44/302 (14%)
Query: 2 IGGGAFGVVY--------RGSLRDGTQIAIKCLSAE-SKQGTKEFLTEIDMIWNI-RHPN 51
+G GAFG V + ++ +A+K L + +++ + ++E++M+ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 52 LVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR------------ANI 99
++ L+G C +D ++ EY +L L + + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G+ +L A +HRD+ A NVL+ N KI DFGLA+ +N+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDXXKKTTN 218
Query: 160 GTM--GYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLR 217
G + ++APE T ++DV+SFGVL+ EI + S I VE +KL
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG------IPVEELFKLL 272
Query: 218 EEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHL--NEK 275
+EG ++ P + C A RPT KQ+VE L + + L NE+
Sbjct: 273 KEGHRMDK--------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEE 324
Query: 276 AL 277
L
Sbjct: 325 YL 326
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 106/200 (53%), Gaps = 16/200 (8%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ-IAIKCLSAES--KQGTKEFLTEIDMIWNIRHPNLVQLIG 57
M+G G+FG V + R Q A+K ++ S + T L E++++ + HPN+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ ++ +V E L + ++ K ++ D A I SG++++H+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHD---AARIIKQVFSGITYMHKHN--- 141
Query: 118 IVHRDIKASNVLLDG---NFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
IVHRD+K N+LL+ + KI DFGL+ F N T + R+ GT Y+APE L G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRGT 198
Query: 175 LTKKADVYSFGVLLLEIISG 194
+K DV+S GV+L ++SG
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 12/195 (6%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG GA G VY + G ++AI+ ++ + + + + EI ++ ++PN+V + +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
+ +V EYL SL + + + +D A +C L FLH ++H
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSNQ---VIH 139
Query: 121 RDIKASNVLLDGNFHPKIGDFGL-AKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
RDIK+ N+LL + K+ DFG A++ P+ + + GT ++APE K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SEMVGTPYWMAPEVVTRKAYGPKV 197
Query: 180 DVYSFGVLLLEIISG 194
D++S G++ +E+I G
Sbjct: 198 DIWSLGIMAIEMIEG 212
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 127/291 (43%), Gaps = 42/291 (14%)
Query: 2 IGGGAFGVVY--------RGSLRDGTQIAIKCLSAE-SKQGTKEFLTEIDMIWNI-RHPN 51
+G GAFG V + ++ +A+K L + +++ + ++E++M+ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 52 LVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR------------ANI 99
++ L+G C +D ++ EY +L L + + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G+ +L A +HRD+ A NVL+ N +I DFGLA+ +N+ +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDI-NNIDYYKKTTN 218
Query: 160 GTM--GYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLR 217
G + ++APE T ++DV+SFGVL+ EI + S I VE +KL
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG------IPVEELFKLL 272
Query: 218 EEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
+EG ++ P + C A RPT KQ+VE L +
Sbjct: 273 KEGHRMDK--------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 101/195 (51%), Gaps = 10/195 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+G G++G VY+ ++ QI AIK + ES +E + EI ++ P++V+ G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
++ + +V EY S+++ ++ ++K ++ D A I T GL +LH +H
Sbjct: 95 KNTDLWIVMEYCGAGSVSD-IIRLRNKTLTED--EIATILQSTLKGLEYLHFMRK---IH 148
Query: 121 RDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKAD 180
RDIKA N+LL+ H K+ DFG+A D + V GT ++APE AD
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK-RNXVIGTPFWMAPEVIQEIGYNCVAD 207
Query: 181 VYSFGVLLLEIISGR 195
++S G+ +E+ G+
Sbjct: 208 IWSLGITAIEMAEGK 222
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 132/302 (43%), Gaps = 44/302 (14%)
Query: 2 IGGGAFGVVY--------RGSLRDGTQIAIKCLSAE-SKQGTKEFLTEIDMIWNI-RHPN 51
+G GAFG V + ++ +A+K L + +++ + ++E++M+ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 52 LVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR------------ANI 99
++ L+G C +D ++ EY +L L + + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G+ +L A +HRD+ A NVL+ N KI DFGLA+ +N+
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDXXKKTTN 218
Query: 160 GTM--GYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLR 217
G + ++APE T ++DV+SFGVL+ EI + S I VE +KL
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG------IPVEELFKLL 272
Query: 218 EEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHL--NEK 275
+EG ++ P + C A RPT KQ+VE L + + L NE+
Sbjct: 273 KEGHRMDK--------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEE 324
Query: 276 AL 277
L
Sbjct: 325 YL 326
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 20/203 (9%)
Query: 1 MIGGGAFGVVYRGS-LRDG----TQIAIKCLSAES-KQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G +AIK L+ + + EF+ E ++ ++ HP+LV+
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVS---LDWPTRANICLGTASGLSFLH 111
L+G C+ + LV + + + L + K S L+W C+ A G+ +L
Sbjct: 82 LLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLE 134
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYA 170
E +VHRD+ A NVL+ H KI DFGLA+L D + + + ++A E
Sbjct: 135 ERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 171 LLGQLTKKADVYSFGVLLLEIIS 193
+ T ++DV+S+GV + E+++
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 106/198 (53%), Gaps = 11/198 (5%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFL-TEIDMIWNIRHPNLVQLIGCC 59
+G GAFG V+ R G + IK ++ + Q E + EI+++ ++ HPN++++
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
+ +N +V E E L ++ ++++ +L A + + L++ H + +V
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VV 146
Query: 120 HRDIKASNVLL-DGNFHP--KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
H+D+K N+L D + H KI DFGLA+LF + ST AGT Y+APE +T
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD--EHSTNAAGTALYMAPE-VFKRDVT 203
Query: 177 KKADVYSFGVLLLEIISG 194
K D++S GV++ +++G
Sbjct: 204 FKCDIWSAGVVMYFLLTG 221
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 12/195 (6%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG GA G VY + G ++AI+ ++ + + + + EI ++ ++PN+V + +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
+ +V EYL SL + + + +D A +C L FLH ++H
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSNQ---VIH 140
Query: 121 RDIKASNVLLDGNFHPKIGDFGL-AKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
RDIK+ N+LL + K+ DFG A++ P+ + + GT ++APE K
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKAYGPKV 198
Query: 180 DVYSFGVLLLEIISG 194
D++S G++ +E+I G
Sbjct: 199 DIWSLGIMAIEMIEG 213
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 114/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
++HRD+K N+L++ K+ DFGLA+ F V + V T+ Y APE LLG
Sbjct: 124 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE-ILLGX 178
Query: 175 --LTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 233
Query: 233 FPE 235
P+
Sbjct: 234 MPD 236
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 114/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 78 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
++HRD+K N+L++ K+ DFGLA+ F V + V T+ Y APE LLG
Sbjct: 131 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE-ILLGX 185
Query: 175 --LTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 240
Query: 233 FPE 235
P+
Sbjct: 241 MPD 243
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 12/195 (6%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG GA G VY + G ++AI+ ++ + + + + EI ++ ++PN+V + +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
+ +V EYL SL + + + +D A +C L FLH ++H
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSNQ---VIH 139
Query: 121 RDIKASNVLLDGNFHPKIGDFGL-AKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
RDIK+ N+LL + K+ DFG A++ P+ + + GT ++APE K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKAYGPKV 197
Query: 180 DVYSFGVLLLEIISG 194
D++S G++ +E+I G
Sbjct: 198 DIWSLGIMAIEMIEG 212
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 114/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 70 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V + V T+ Y APE LLG
Sbjct: 123 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE-ILLGC 177
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 232
Query: 233 FPE 235
P+
Sbjct: 233 MPD 235
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 99/198 (50%), Gaps = 17/198 (8%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+G GAFG VY+ ++ G A K + +S++ ++++ EI+++ HP +V+L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
D ++ E+ ++ +L L P +C L+FLH + I+H
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDR---GLTEPQIQVVCRQMLEALNFLHSKR---IIH 140
Query: 121 RDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTR--VAGTMGYLAPEYALLGQLTK- 177
RD+KA NVL+ ++ DFG++ N+ + R GT ++APE + +
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSA---KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 178 ----KADVYSFGVLLLEI 191
KAD++S G+ L+E+
Sbjct: 198 PYDYKADIWSLGITLIEM 215
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 114/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V + V T+ Y APE LLG
Sbjct: 124 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE-ILLGC 178
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 233
Query: 233 FPE 235
P+
Sbjct: 234 MPD 236
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 114/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 70 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V + V T+ Y APE LLG
Sbjct: 123 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE-ILLGC 177
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 232
Query: 233 FPE 235
P+
Sbjct: 233 MPD 235
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 2 IGGGAFGVV---YRGSLRD--GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V L+D G +A+K L +++ ++F EI+++ +++H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 57 GCCVEDNNR--ILVYEYLENNSLANALLGSKSK--YVSLDWPTRANICLGTASGLSFLHE 112
G C R L+ E+L SL L K + ++ L T + IC G+ +L
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYT-SQIC----KGMEYL-- 133
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYA 170
+HRD+ N+L++ KIGDFGL K+ P + + G + + APE
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
+ + +DV+SFGV+L E+ + SK+ + M ++
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 231
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 114/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V + V T+ Y APE LLG
Sbjct: 124 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE-ILLGC 178
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 233
Query: 233 FPE 235
P+
Sbjct: 234 MPD 236
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 114/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 72 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V + V T+ Y APE LLG
Sbjct: 125 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE-ILLGC 179
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 234
Query: 233 FPE 235
P+
Sbjct: 235 MPD 237
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 114/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 75 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V + V T+ Y APE LLG
Sbjct: 128 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE-ILLGC 182
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 237
Query: 233 FPE 235
P+
Sbjct: 238 MPD 240
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 114/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 78 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V + V T+ Y APE LLG
Sbjct: 131 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE-ILLGC 185
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 240
Query: 233 FPE 235
P+
Sbjct: 241 MPD 243
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 2 IGGGAFGVVYRGSLRD----GTQIAIK-CLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
IG G FG V++G +AIK C + S ++FL E + HP++V+LI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
G E+ V+ +E +L + + SLD + ++ L++L +
Sbjct: 458 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR-- 511
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
VHRDI A NVL+ N K+GDFGL++ D+ + +++ + ++APE + T
Sbjct: 512 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 177 KKADVYSFGVLLLEII 192
+DV+ FGV + EI+
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 2 IGGGAFGVVYRGSLRD----GTQIAIK-CLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
IG G FG V++G +AIK C + S ++FL E + HP++V+LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
G E+ V+ +E +L + + SLD + ++ L++L +
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
VHRDI A NVL+ N K+GDFGL++ D+ + +++ + ++APE + T
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 177 KKADVYSFGVLLLEII 192
+DV+ FGV + EI+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 108/219 (49%), Gaps = 19/219 (8%)
Query: 2 IGGGAFGVV---YRGSLRD--GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V L+D G +A+K L +++ ++F EI+++ +++H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 57 GCCVEDNNR--ILVYEYLENNSLANALLGSKSK--YVSLDWPTRANICLGTASGLSFLHE 112
G C R L+ EYL SL + L + ++ L T + IC G+ +L
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYT-SQIC----KGMEYL-- 133
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYA 170
+HRD+ N+L++ KIGDFGL K+ P + + G + + APE
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
+ + +DV+SFGV+L E+ + SK+ + M ++
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 231
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 42/291 (14%)
Query: 2 IGGGAFGVVY--------RGSLRDGTQIAIKCLSAE-SKQGTKEFLTEIDMIWNI-RHPN 51
+G G FG V + ++ +A+K L + +++ + ++E++M+ I +H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 52 LVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR------------ANI 99
++ L+G C +D ++ EY +L L + + + +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G+ +L A +HRD+ A NVL+ N KI DFGLA+ +N+ +
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 205
Query: 160 GTM--GYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLR 217
G + ++APE T ++DV+SFGVL+ EI + S I VE +KL
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG------IPVEELFKLL 259
Query: 218 EEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
+EG ++ P + C A RPT KQ+VE L +
Sbjct: 260 KEGHRMDK--------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 302
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 99/198 (50%), Gaps = 17/198 (8%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+G GAFG VY+ ++ G A K + +S++ ++++ EI+++ HP +V+L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
D ++ E+ ++ +L L P +C L+FLH + I+H
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDR---GLTEPQIQVVCRQMLEALNFLHSKR---IIH 132
Query: 121 RDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTR--VAGTMGYLAPEYALLGQLTK- 177
RD+KA NVL+ ++ DFG++ N+ + R GT ++APE + +
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSA---KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 178 ----KADVYSFGVLLLEI 191
KAD++S G+ L+E+
Sbjct: 190 PYDYKADIWSLGITLIEM 207
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 42/291 (14%)
Query: 2 IGGGAFGVVY--------RGSLRDGTQIAIKCLSAE-SKQGTKEFLTEIDMIWNI-RHPN 51
+G G FG V + ++ +A+K L + +++ + ++E++M+ I +H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 52 LVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR------------ANI 99
++ L+G C +D ++ EY +L L + + + +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G+ +L A +HRD+ A NVL+ N KI DFGLA+ +N+ +
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 264
Query: 160 GTM--GYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLR 217
G + ++APE T ++DV+SFGVL+ EI + S I VE +KL
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG------IPVEELFKLL 318
Query: 218 EEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
+EG ++ P + C A RPT KQ+VE L +
Sbjct: 319 KEGHRMDK--------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 42/291 (14%)
Query: 2 IGGGAFGVVY--------RGSLRDGTQIAIKCLSAE-SKQGTKEFLTEIDMIWNI-RHPN 51
+G G FG V + ++ +A+K L + +++ + ++E++M+ I +H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 52 LVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR------------ANI 99
++ L+G C +D ++ EY +L L + + + +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G+ +L A +HRD+ A NVL+ N KI DFGLA+ +N+ +
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 210
Query: 160 GTM--GYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLR 217
G + ++APE T ++DV+SFGVL+ EI + S I VE +KL
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG------IPVEELFKLL 264
Query: 218 EEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
+EG ++ P + C A RPT KQ+VE L +
Sbjct: 265 KEGHRMDK--------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 307
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 42/291 (14%)
Query: 2 IGGGAFGVVY--------RGSLRDGTQIAIKCLSAE-SKQGTKEFLTEIDMIWNI-RHPN 51
+G G FG V + ++ +A+K L + +++ + ++E++M+ I +H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 52 LVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR------------ANI 99
++ L+G C +D ++ EY +L L + + + +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G+ +L A +HRD+ A NVL+ N KI DFGLA+ +N+ +
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 207
Query: 160 GTM--GYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLR 217
G + ++APE T ++DV+SFGVL+ EI + S I VE +KL
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG------IPVEELFKLL 261
Query: 218 EEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
+EG ++ P + C A RPT KQ+VE L +
Sbjct: 262 KEGHRMDK--------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 304
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 2 IGGGAFGVVYRGSLRD----GTQIAIK-CLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
IG G FG V++G +AIK C + S ++FL E + HP++V+LI
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
G E+ V+ +E +L + + SLD + ++ L++L +
Sbjct: 80 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR-- 133
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
VHRDI A NVL+ N K+GDFGL++ D+ + +++ + ++APE + T
Sbjct: 134 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 192
Query: 177 KKADVYSFGVLLLEII 192
+DV+ FGV + EI+
Sbjct: 193 SASDVWMFGVCMWEIL 208
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 2 IGGGAFGVVYRGSLRD----GTQIAIK-CLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
IG G FG V++G +AIK C + S ++FL E + HP++V+LI
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
G E+ V+ +E +L + + SLD + ++ L++L +
Sbjct: 75 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR-- 128
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
VHRDI A NVL+ N K+GDFGL++ D+ + +++ + ++APE + T
Sbjct: 129 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 177 KKADVYSFGVLLLEII 192
+DV+ FGV + EI+
Sbjct: 188 SASDVWMFGVCMWEIL 203
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 2 IGGGAFGVVYRGSLRD----GTQIAIK-CLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
IG G FG V++G +AIK C + S ++FL E + HP++V+LI
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
G E+ V+ +E +L + + SLD + ++ L++L +
Sbjct: 81 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR-- 134
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
VHRDI A NVL+ N K+GDFGL++ D+ + +++ + ++APE + T
Sbjct: 135 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 193
Query: 177 KKADVYSFGVLLLEII 192
+DV+ FGV + EI+
Sbjct: 194 SASDVWMFGVCMWEIL 209
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
+N LV+E+L + L + + S + L P + GL+F H +
Sbjct: 71 IHTENKLYLVFEFLHQD-LKDFMDASALTGIPL--PLIKSYLFQLLQGLAFCHSHR---V 124
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG--QLT 176
+HRD+K N+L++ K+ DFGLA+ F V V T+ Y APE LLG +
Sbjct: 125 LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE-ILLGCKYYS 182
Query: 177 KKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFPE 235
D++S G + E+++ R+ D L + R G E+V P +T P+
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTSMPD 236
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 2 IGGGAFGVVYRGSLRD----GTQIAIK-CLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
IG G FG V++G +AIK C + S ++FL E + HP++V+LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
G E+ V+ +E +L + + SLD + ++ L++L +
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
VHRDI A NVL+ N K+GDFGL++ D+ + +++ + ++APE + T
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 177 KKADVYSFGVLLLEII 192
+DV+ FGV + EI+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 109/239 (45%), Gaps = 18/239 (7%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
+N LV+E+L + S + P + GL+F H +
Sbjct: 74 IHTENKLYLVFEFLHQDL---KTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---V 127
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG--QLT 176
+HRD+K N+L++ K+ DFGLA+ F V V T+ Y APE LLG +
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE-ILLGCKYYS 185
Query: 177 KKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFPE 235
D++S G + E+++ R+ D L + R G E+V P +T P+
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTSMPD 239
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 74 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V V T+ Y APE LLG
Sbjct: 127 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE-ILLGC 181
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 236
Query: 233 FPE 235
P+
Sbjct: 237 MPD 239
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 12/196 (6%)
Query: 2 IGGGAFGVVYRGSLRD----GTQIAIK-CLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
IG G FG V++G +AIK C + S ++FL E + HP++V+LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
G E+ V+ +E +L + + SLD + ++ L++L +
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
VHRDI A NVL+ N K+GDFGL++ D+ +++ + ++APE + T
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFT 190
Query: 177 KKADVYSFGVLLLEII 192
+DV+ FGV + EI+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 73 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V V T+ Y APE LLG
Sbjct: 126 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE-ILLGC 180
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 235
Query: 233 FPE 235
P+
Sbjct: 236 MPD 238
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 2 IGGGAFGVVYRGSLRD----GTQIAIK-CLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
IG G FG V++G +AIK C + S ++FL E + HP++V+LI
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
G E+ V+ +E +L + + SLD + ++ L++L +
Sbjct: 106 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR-- 159
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
VHRDI A NVL+ N K+GDFGL++ D+ + +++ + ++APE + T
Sbjct: 160 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 218
Query: 177 KKADVYSFGVLLLEII 192
+DV+ FGV + EI+
Sbjct: 219 SASDVWMFGVCMWEIL 234
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 74 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V V T+ Y APE LLG
Sbjct: 127 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE-ILLGC 181
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 236
Query: 233 FPE 235
P+
Sbjct: 237 MPD 239
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 73 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V V T+ Y APE LLG
Sbjct: 126 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE-ILLGC 180
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 235
Query: 233 FPE 235
P+
Sbjct: 236 MPD 238
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V V T+ Y APE LLG
Sbjct: 124 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE-ILLGC 178
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 233
Query: 233 FPE 235
P+
Sbjct: 234 MPD 236
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 18/239 (7%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
+N LV+E+L S+ S + P + GL+F H +
Sbjct: 74 IHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---V 127
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG--QLT 176
+HRD+K N+L++ K+ DFGLA+ F V V T+ Y APE LLG +
Sbjct: 128 LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE-ILLGCKYYS 185
Query: 177 KKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFPE 235
D++S G + E+++ R+ D L + R G E+V P +T P+
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTSMPD 239
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 70 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V V T+ Y APE LLG
Sbjct: 123 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE-ILLGC 177
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 232
Query: 233 FPE 235
P+
Sbjct: 233 MPD 235
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 2 IGGGAFGVVYRGSLRD----GTQIAIK-CLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
IG G FG V++G +AIK C + S ++FL E + HP++V+LI
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
G E+ V+ +E +L + + SLD + ++ L++L +
Sbjct: 83 GVITENP----VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR-- 136
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
VHRDI A NVL+ N K+GDFGL++ D+ + +++ + ++APE + T
Sbjct: 137 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 195
Query: 177 KKADVYSFGVLLLEII 192
+DV+ FGV + EI+
Sbjct: 196 SASDVWMFGVCMWEIL 211
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V V T+ Y APE LLG
Sbjct: 124 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE-ILLGC 178
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 233
Query: 233 FPE 235
P+
Sbjct: 234 MPD 236
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V V T+ Y APE LLG
Sbjct: 124 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE-ILLGC 178
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 233
Query: 233 FPE 235
P+
Sbjct: 234 MPD 236
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 73 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 125
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V V T+ Y APE LLG
Sbjct: 126 ---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE-ILLGC 180
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 235
Query: 233 FPE 235
P+
Sbjct: 236 MPD 238
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 70 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V V T+ Y APE LLG
Sbjct: 123 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE-ILLGC 177
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 232
Query: 233 FPE 235
P+
Sbjct: 233 MPD 235
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 72 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V V T+ Y APE LLG
Sbjct: 125 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE-ILLGC 179
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 234
Query: 233 FPE 235
P+
Sbjct: 235 MPD 237
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 8/199 (4%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAES-KQGTKEFL-TEIDMIWNIRHPNLVQLIGC 58
IG G++G + + DG + K L S + K+ L +E++++ ++HPN+V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 59 CVEDNNRIL--VYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD- 115
++ N L V EY E LA+ + + LD + L H +D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 116 -PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
++HRD+K +NV LDG + K+GDFGLA++ ++ + GT Y++PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDEDFAKEFVGTPYYMSPEQMNRMS 192
Query: 175 LTKKADVYSFGVLLLEIIS 193
+K+D++S G LL E+ +
Sbjct: 193 YNEKSDIWSLGCLLYELCA 211
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 18/239 (7%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
+N LV+E+L S+ S + P + GL+F H +
Sbjct: 72 IHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---V 125
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG--QLT 176
+HRD+K N+L++ K+ DFGLA+ F V V T+ Y APE LLG +
Sbjct: 126 LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE-ILLGCKYYS 183
Query: 177 KKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFPE 235
D++S G + E+++ R+ D L + R G E+V P +T P+
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTSMPD 237
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 72 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V V T+ Y APE LLG
Sbjct: 125 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE-ILLGC 179
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 234
Query: 233 FPE 235
P+
Sbjct: 235 MPD 237
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 15/211 (7%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCC 59
+G G +GVVY+ G +A+K L AE + + EI ++ + HPN+V LI
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL-GTASGLSFLHEEADPPI 118
+ LV+E++E + L L +K+ ++ I L G++ H+ I
Sbjct: 89 HSERCLTLVFEFMEKD-LKKVLDENKTGLQD----SQIKIYLYQLLRGVAHCHQHR---I 140
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG--QLT 176
+HRD+K N+L++ + K+ DFGLA+ F V + V T+ Y AP+ L+G + +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPD-VLMGSKKYS 198
Query: 177 KKADVYSFGVLLLEIISGRSSSKAAFGDDML 207
D++S G + E+I+G+ DD L
Sbjct: 199 TSVDIWSIGCIFAEMITGKPLFPGVTDDDQL 229
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V V T+ Y APE LLG
Sbjct: 124 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE-ILLGC 178
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 233
Query: 233 FPE 235
P+
Sbjct: 234 MPD 236
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 42/291 (14%)
Query: 2 IGGGAFGVVY--------RGSLRDGTQIAIKCLSAE-SKQGTKEFLTEIDMIWNI-RHPN 51
+G GAFG V + ++ +A+K L + +++ + ++E++M+ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 52 LVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR------------ANI 99
++ L+G C +D ++ Y +L L + + + +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G+ +L A +HRD+ A NVL+ N KI DFGLA+ +N+ +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 218
Query: 160 GTM--GYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLR 217
G + ++APE T ++DV+SFGVL+ EI + S I VE +KL
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG------IPVEELFKLL 272
Query: 218 EEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
+EG ++ P + C A RPT KQ+VE L +
Sbjct: 273 KEGHRMDK--------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 9/199 (4%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCC 59
++G G +G+VY G L + +IAIK + + ++ EI + +++H N+VQ +G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
E+ + E + SL+ ALL SK + + T GL +LH D IV
Sbjct: 89 SENGFIKIFMEQVPGGSLS-ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIV 144
Query: 120 HRDIKASNVLLDGNFHP-KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ--LT 176
HRDIK NVL++ KI DFG +K + + GT+ Y+APE G
Sbjct: 145 HRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGPRGYG 203
Query: 177 KKADVYSFGVLLLEIISGR 195
K AD++S G ++E+ +G+
Sbjct: 204 KAADIWSLGCTIIEMATGK 222
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 72 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 124
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V V T+ Y APE LLG
Sbjct: 125 ---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE-ILLGC 179
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 234
Query: 233 FPE 235
P+
Sbjct: 235 MPD 237
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 75 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V V T+ Y APE LLG
Sbjct: 128 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE-ILLGC 182
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 237
Query: 233 FPE 235
P+
Sbjct: 238 MPD 240
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 18/239 (7%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
+N LV+E+L S+ S + P + GL+F H +
Sbjct: 73 IHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---V 126
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG--QLT 176
+HRD+K N+L++ K+ DFGLA+ F V V T+ Y APE LLG +
Sbjct: 127 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE-ILLGCKYYS 184
Query: 177 KKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFPE 235
D++S G + E+++ R+ D L + R G E+V P +T P+
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTSMPD 238
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 134/296 (45%), Gaps = 41/296 (13%)
Query: 2 IGGGAFGVVYRGSL-----RDGT-QIAIKCLSAESKQGTKE-FLTEIDMIWNI-RHPNLV 53
+G GAFG V + D ++A+K L + + KE ++E+ ++ ++ +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 54 QLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRA--NICLGT-------- 103
L+G C +++ EY L N L KS+ + D P A N L T
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLN-FLRRKSRVLETD-PAFAIANSTLSTRDLLHFSS 171
Query: 104 --ASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAG 160
A G++FL A +HRD+ A NVLL KIGDFGLA+ + D+ V
Sbjct: 172 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 161 TMGYLAPEYALLGQLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREE 219
+ ++APE T ++DV+S+G+LL EI S G + + +KL ++
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF------YKLVKD 282
Query: 220 GRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLNEK 275
G ++ P F K + ++ C +RPT +Q+ L + + +
Sbjct: 283 G--YQMAQPA---FAPKNIYSIMQA---CWALEPTHRPTFQQICSFLQEQAQEDRR 330
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 94/194 (48%), Gaps = 10/194 (5%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG GA G VY + G ++AI+ ++ + + + + EI ++ ++PN+V + +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
+ +V EYL SL + + + +D A +C L FLH ++H
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSNQ---VIH 140
Query: 121 RDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKAD 180
R+IK+ N+LL + K+ DFG + ST V GT ++APE K D
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVD 199
Query: 181 VYSFGVLLLEIISG 194
++S G++ +E+I G
Sbjct: 200 IWSLGIMAIEMIEG 213
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 33/221 (14%)
Query: 2 IGGGAFGVVYRG------SLRDGTQIAIKCLSAESKQGTK-EFLTEIDMIWNIRHPNLVQ 54
IG GAFG V++ T +A+K L E+ + +F E ++ +PN+V+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSL-----DWPTRANI---------- 99
L+G C L++EY+ L N L S S + D TRA +
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDL-NEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 100 ----CLG--TASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVT 152
C+ A+G+++L E VHRD+ N L+ N KI DFGL++ ++ +
Sbjct: 174 AEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 153 HVSTRVAGTMGYLAPEYALLGQLTKKADVYSFGVLLLEIIS 193
A + ++ PE + T ++DV+++GV+L EI S
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 9/199 (4%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCC 59
++G G +G+VY G L + +IAIK + + ++ EI + +++H N+VQ +G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
E+ + E + SL+ ALL SK + + T GL +LH D IV
Sbjct: 75 SENGFIKIFMEQVPGGSLS-ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIV 130
Query: 120 HRDIKASNVLLDGNFHP-KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ--LT 176
HRDIK NVL++ KI DFG +K + + GT+ Y+APE G
Sbjct: 131 HRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGPRGYG 189
Query: 177 KKADVYSFGVLLLEIISGR 195
K AD++S G ++E+ +G+
Sbjct: 190 KAADIWSLGCTIIEMATGK 208
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 15/211 (7%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCC 59
+G G +GVVY+ G +A+K L AE + + EI ++ + HPN+V LI
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL-GTASGLSFLHEEADPPI 118
+ LV+E++E + L L +K+ ++ I L G++ H+ I
Sbjct: 89 HSERCLTLVFEFMEKD-LKKVLDENKTGLQD----SQIKIYLYQLLRGVAHCHQHR---I 140
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG--QLT 176
+HRD+K N+L++ + K+ DFGLA+ F V + V T+ Y AP+ L+G + +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPD-VLMGSKKYS 198
Query: 177 KKADVYSFGVLLLEIISGRSSSKAAFGDDML 207
D++S G + E+I+G+ DD L
Sbjct: 199 TSVDIWSIGCIFAEMITGKPLFPGVTDDDQL 229
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 18/239 (7%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
+N LV+E+L S+ S + P + GL+F H +
Sbjct: 74 IHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---V 127
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG--QLT 176
+HRD+K N+L++ K+ DFGLA+ F V V T+ Y APE LLG +
Sbjct: 128 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE-ILLGCKYYS 185
Query: 177 KKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFPE 235
D++S G + E+++ R+ D L + R G E+V P +T P+
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTSMPD 239
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 90/208 (43%), Gaps = 27/208 (12%)
Query: 1 MIGGGAFGVVYRGSLRDGTQI-AIKCL---------SAESKQGTKEFLTEIDMIWNIRHP 50
M+G G+FG V+ + Q AIK L E K L+ + W HP
Sbjct: 25 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS---LAW--EHP 79
Query: 51 NLVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFL 110
L + N V EYL L + +S A I LG L FL
Sbjct: 80 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG----LQFL 135
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK--LFPDNVTHVSTRVAGTMGYLAPE 168
H + IV+RD+K N+LLD + H KI DFG+ K + D T GT Y+APE
Sbjct: 136 HSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT---NEFCGTPDYIAPE 189
Query: 169 YALLGQLTKKADVYSFGVLLLEIISGRS 196
L + D +SFGVLL E++ G+S
Sbjct: 190 ILLGQKYNHSVDWWSFGVLLYEMLIGQS 217
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 110/239 (46%), Gaps = 18/239 (7%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
+N LV+E++ + S + P + GL+F H +
Sbjct: 70 IHTENKLYLVFEHVHQDL---KTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---V 123
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG--QLT 176
+HRD+K N+L++ K+ DFGLA+ F V + V T+ Y APE LLG +
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE-ILLGCKYYS 181
Query: 177 KKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFPE 235
D++S G + E+++ R+ D L + R G E+V P +T P+
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTSMPD 235
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 103/208 (49%), Gaps = 27/208 (12%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ----IAIKCLSAESK-QGTKEFLTEIDMIWNIRHPNLVQL 55
+IG G FGVVY G D Q AIK LS ++ Q + FL E ++ + HPN++ L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 56 IGCCV--EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC---LGTASGLSFL 110
IG + E +L+ Y+ + L + + PT ++ L A G+ +L
Sbjct: 88 IGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRN------PTVKDLISFGLQVARGMEYL 140
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDN-----VTHVSTRVAGTMGYL 165
E+ VHRD+ A N +LD +F K+ DFGLA+ D H R+ + +
Sbjct: 141 AEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLP--VKWT 195
Query: 166 APEYALLGQLTKKADVYSFGVLLLEIIS 193
A E + T K+DV+SFGVLL E+++
Sbjct: 196 ALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 42/291 (14%)
Query: 2 IGGGAFGVVY--------RGSLRDGTQIAIKCLSAE-SKQGTKEFLTEIDMIWNI-RHPN 51
+G GAFG V + ++ +A+K L + +++ + ++E++M+ I +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 52 LVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR------------ANI 99
++ L+G C +D ++ Y +L L + + + +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G+ +L A +HRD+ A NVL+ N KI DFGLA+ +N+ +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 218
Query: 160 GTM--GYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLR 217
G + ++APE T ++DV+SFGVL+ EI + S I VE +KL
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG------IPVEELFKLL 272
Query: 218 EEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
+EG ++ P + C A RPT KQ+VE L +
Sbjct: 273 KEGHRMDK--------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 91/208 (43%), Gaps = 27/208 (12%)
Query: 1 MIGGGAFGVVYRGSLRDGTQI-AIKCL---------SAESKQGTKEFLTEIDMIWNIRHP 50
M+G G+FG V+ + Q AIK L E K L+ + W HP
Sbjct: 24 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS---LAW--EHP 78
Query: 51 NLVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFL 110
L + N V EYL L + +S A I LG L FL
Sbjct: 79 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG----LQFL 134
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK--LFPDNVTHVSTRVAGTMGYLAPE 168
H + IV+RD+K N+LLD + H KI DFG+ K + D T+ GT Y+APE
Sbjct: 135 HSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNX---FCGTPDYIAPE 188
Query: 169 YALLGQLTKKADVYSFGVLLLEIISGRS 196
L + D +SFGVLL E++ G+S
Sbjct: 189 ILLGQKYNHSVDWWSFGVLLYEMLIGQS 216
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG G+ G+V + + G Q+A+K + +Q + E+ ++ + H N+V + +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
+ +V E+LE +L + + ++ ++ A +CL LS+LH + ++H
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTR-----MNEEQIATVCLSVLRALSYLHNQG---VIH 164
Query: 121 RDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKAD 180
RDIK+ ++LL + K+ DFG V + GT ++APE + D
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK-RKXLVGTPYWMAPEVISRLPYGTEVD 223
Query: 181 VYSFGVLLLEIISG 194
++S G++++E+I G
Sbjct: 224 IWSLGIMVIEMIDG 237
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 12/196 (6%)
Query: 2 IGGGAFGVVYRGSLRD----GTQIAIK-CLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
IG G FG V++G +AIK C + S ++FL E + HP++V+LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
G E+ V+ +E +L + + SLD + ++ L++L +
Sbjct: 78 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
VHRDI A NVL+ K+GDFGL++ D+ + +++ + ++APE + T
Sbjct: 132 -FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 177 KKADVYSFGVLLLEII 192
+DV+ FGV + EI+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 113/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+ L E++ + EI ++ + HPN+V+L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V + V T+ Y APE LLG
Sbjct: 124 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE-ILLGC 178
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 233
Query: 233 FPE 235
P+
Sbjct: 234 MPD 236
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 113/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+ L E++ + EI ++ + HPN+V+L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+L + A+AL G + P + GL+F H
Sbjct: 70 IHTENKLYLVFEFLHQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V + V T+ Y APE LLG
Sbjct: 123 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE-ILLGC 177
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 232
Query: 233 FPE 235
P+
Sbjct: 233 MPD 235
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 131/294 (44%), Gaps = 37/294 (12%)
Query: 2 IGGGAFGVVYRGSL-----RDGT-QIAIKCLSAESKQGTKE-FLTEIDMIWNI-RHPNLV 53
+G GAFG V + D ++A+K L + + KE ++E+ ++ ++ +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 54 QLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE 113
L+G C +++ EY L N L KS+ + D P A I TAS LH
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLN-FLRRKSRVLETD-PAFA-IANSTASTRDLLHFS 170
Query: 114 ----------ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTM 162
A +HRD+ A NVLL KIGDFGLA+ + D+ V +
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 163 GYLAPEYALLGQLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGR 221
++APE T ++DV+S+G+LL EI S G + + +KL ++G
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF------YKLVKDG- 283
Query: 222 LLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLNEK 275
++ P F K + ++ C +RPT +Q+ L + + +
Sbjct: 284 -YQMAQPA---FAPKNIYSIMQA---CWALEPTHRPTFQQICSFLQEQAQEDRR 330
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 114/243 (46%), Gaps = 26/243 (10%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +GVVY+ + G +A+K L E++ + EI ++ + HPN+V+L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 59 CVEDNNRILVYEYLENNSL----ANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+N LV+E+++ + A+AL G + P + GL+F H
Sbjct: 74 IHTENKLYLVFEHVDQDLKKFMDASALTG-------IPLPLIKSYLFQLLQGLAFCHSHR 126
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
++HRD+K N+L++ K+ DFGLA+ F V V T+ Y APE LLG
Sbjct: 127 ---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE-ILLGC 181
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
+ D++S G + E+++ R+ D L + R G E+V P +T
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-----FRTLGTPDEVVWPGVTS 236
Query: 233 FPE 235
P+
Sbjct: 237 MPD 239
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 29/210 (13%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG G FG V+RG R G ++A+K S+ E + +E EI +RH N++ I
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 67
Query: 61 EDNNRI----LVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE--- 113
+DN LV +Y E+ SL + L ++Y ++ + L TASGL+ LH E
Sbjct: 68 KDNGTWTQLWLVSDYHEHGSLFDYL----NRY-TVTVEGMIKLALSTASGLAHLHMEIVG 122
Query: 114 --ADPPIVHRDIKASNVLLDGNFHPKIGDFGLA---KLFPDNVTHVSTRVAGTMGYLAPE 168
P I HRD+K+ N+L+ N I D GLA D + GT Y+APE
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 182
Query: 169 YALLGQLT-------KKADVYSFGVLLLEI 191
L + K+AD+Y+ G++ EI
Sbjct: 183 -VLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 39/224 (17%)
Query: 2 IGGGAFGVVYRGSL-----RDG-TQIAIKCLSAE-SKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G FG V + + R G T +A+K L S ++ L+E +++ + HP++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKS------------KYVSLDWPTRANICLG 102
L G C +D +L+ EY + SL L S+ SLD P + +G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 103 --------TASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHV 154
+ G+ +L E + +VHRD+ A N+L+ KI DFGL++ +V
Sbjct: 151 DLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSR----DVYEE 203
Query: 155 STRVAGTMGYLAPEYALLGQL-----TKKADVYSFGVLLLEIIS 193
+ V + G + ++ + L T ++DV+SFGVLL EI++
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 29/210 (13%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG G FG V+RG R G ++A+K S+ E + +E EI +RH N++ I
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 68
Query: 61 EDNNRI----LVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE--- 113
+DN LV +Y E+ SL + L ++Y ++ + L TASGL+ LH E
Sbjct: 69 KDNGTWTQLWLVSDYHEHGSLFDYL----NRY-TVTVEGMIKLALSTASGLAHLHMEIVG 123
Query: 114 --ADPPIVHRDIKASNVLLDGNFHPKIGDFGLA---KLFPDNVTHVSTRVAGTMGYLAPE 168
P I HRD+K+ N+L+ N I D GLA D + GT Y+APE
Sbjct: 124 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 183
Query: 169 YALLGQLT-------KKADVYSFGVLLLEI 191
L + K+AD+Y+ G++ EI
Sbjct: 184 -VLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 12/196 (6%)
Query: 2 IGGGAFGVVYRGSLRD----GTQIAIK-CLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
IG G FG V++G +AIK C + S ++FL E + HP++V+LI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
G E+ V+ +E +L + + SLD + ++ L++L +
Sbjct: 458 GVITENP----VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR-- 511
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
VHRDI A NVL+ K+GDFGL++ D+ + +++ + ++APE + T
Sbjct: 512 -FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 177 KKADVYSFGVLLLEII 192
+DV+ FGV + EI+
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 29/210 (13%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG G FG V+RG R G ++A+K S+ E + +E EI +RH N++ I
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 70
Query: 61 EDNNRI----LVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE--- 113
+DN LV +Y E+ SL + L ++Y ++ + L TASGL+ LH E
Sbjct: 71 KDNGTWTQLWLVSDYHEHGSLFDYL----NRY-TVTVEGMIKLALSTASGLAHLHMEIVG 125
Query: 114 --ADPPIVHRDIKASNVLLDGNFHPKIGDFGLA---KLFPDNVTHVSTRVAGTMGYLAPE 168
P I HRD+K+ N+L+ N I D GLA D + GT Y+APE
Sbjct: 126 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 185
Query: 169 YALLGQLT-------KKADVYSFGVLLLEI 191
L + K+AD+Y+ G++ EI
Sbjct: 186 -VLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 29/210 (13%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG G FG V+RG R G ++A+K S+ E + +E EI +RH N++ I
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 73
Query: 61 EDNNRI----LVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE--- 113
+DN LV +Y E+ SL + L ++Y ++ + L TASGL+ LH E
Sbjct: 74 KDNGTWTQLWLVSDYHEHGSLFDYL----NRY-TVTVEGMIKLALSTASGLAHLHMEIVG 128
Query: 114 --ADPPIVHRDIKASNVLLDGNFHPKIGDFGLA---KLFPDNVTHVSTRVAGTMGYLAPE 168
P I HRD+K+ N+L+ N I D GLA D + GT Y+APE
Sbjct: 129 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 188
Query: 169 YALLGQLT-------KKADVYSFGVLLLEI 191
L + K+AD+Y+ G++ EI
Sbjct: 189 -VLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 11/181 (6%)
Query: 18 GTQIAIKCLSAESK-QGTKEFLTEIDMIWNIRHPNLVQLIGCCVED--NNRILVYEYLEN 74
G Q+A+K L ES + EI+++ N+ H N+V+ G C ED N L+ E+L +
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 75 NSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNF 134
SL L +K+K ++ + + G+ +L VHRD+ A NVL++
Sbjct: 110 GSLKEYLPKNKNK---INLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEH 163
Query: 135 HPKIGDFGLAKLFPDNVTHVSTR--VAGTMGYLAPEYALLGQLTKKADVYSFGVLLLEII 192
KIGDFGL K + + + + + APE + + +DV+SFGV L E++
Sbjct: 164 QVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
Query: 193 S 193
+
Sbjct: 224 T 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 11/181 (6%)
Query: 18 GTQIAIKCLSAESK-QGTKEFLTEIDMIWNIRHPNLVQLIGCCVED--NNRILVYEYLEN 74
G Q+A+K L ES + EI+++ N+ H N+V+ G C ED N L+ E+L +
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 75 NSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNF 134
SL L +K+K ++ + + G+ +L VHRD+ A NVL++
Sbjct: 98 GSLKEYLPKNKNK---INLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEH 151
Query: 135 HPKIGDFGLAKLFPDNVTHVSTR--VAGTMGYLAPEYALLGQLTKKADVYSFGVLLLEII 192
KIGDFGL K + + + + + APE + + +DV+SFGV L E++
Sbjct: 152 QVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 211
Query: 193 S 193
+
Sbjct: 212 T 212
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 98/211 (46%), Gaps = 27/211 (12%)
Query: 2 IGGGAFGVVYRGSLR------DGTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G GAFG VY G + Q+A+K L S+Q +FL E +I H N+V+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK---SKYVSLDWPTRANICLGTASGLSFLH 111
IG ++ R ++ E + L + L ++ S+ SL ++ A G +L
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 112 EEADPPIVHRDIKASNVLL----DGNFHPKIGDFGLAKLFPDNVTHVSTRVAG-----TM 162
E +HRDI A N LL G KIGDFG+A+ ++ S G +
Sbjct: 185 ENH---FIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR----DIYRASYYRKGGCAMLPV 236
Query: 163 GYLAPEYALLGQLTKKADVYSFGVLLLEIIS 193
++ PE + G T K D +SFGVLL EI S
Sbjct: 237 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 100/211 (47%), Gaps = 31/211 (14%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG G +G V+ G R G ++A+K + E +E TEI +RH N++ I +
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRE--TEIYQTVLMRHENILGFIAADI 101
Query: 61 EDNNR----ILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE--- 113
+ L+ +Y EN SL + L K +LD + + + SGL LH E
Sbjct: 102 KGTGSWTQLYLITDYHENGSLYDYL-----KSTTLDAKSMLKLAYSSVSGLCHLHTEIFS 156
Query: 114 --ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHV----STRVAGTMGYLAP 167
P I HRD+K+ N+L+ N I D GLA F + V +TRV GT Y+ P
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYMPP 215
Query: 168 EYALLGQLTKK-------ADVYSFGVLLLEI 191
E L L + AD+YSFG++L E+
Sbjct: 216 E-VLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 39/224 (17%)
Query: 2 IGGGAFGVVYRGSL-----RDG-TQIAIKCLSAE-SKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G FG V + + R G T +A+K L S ++ L+E +++ + HP++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKS------------KYVSLDWPTRANICLG 102
L G C +D +L+ EY + SL L S+ SLD P + +G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 103 --------TASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHV 154
+ G+ +L A+ +VHRD+ A N+L+ KI DFGL++ +V
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR----DVYEE 203
Query: 155 STRVAGTMGYLAPEYALLGQL-----TKKADVYSFGVLLLEIIS 193
+ V + G + ++ + L T ++DV+SFGVLL EI++
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG G+ G+V ++R G +A+K + +Q + E+ ++ + +H N+V++ +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
+ +V E+LE +L + + ++ + A +CL LS LH + ++H
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG---VIH 148
Query: 121 RDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKAD 180
RDIK+ ++LL + K+ DFG V + GT ++APE + D
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVD 207
Query: 181 VYSFGVLLLEIISG 194
++S G++++E++ G
Sbjct: 208 IWSLGIMVIEMVDG 221
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 29/210 (13%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG G FG V+RG R G ++A+K S+ E + +E EI +RH N++ I
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 93
Query: 61 EDNNRI----LVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE--- 113
+DN LV +Y E+ SL + L ++Y ++ + L TASGL+ LH E
Sbjct: 94 KDNGTWTQLWLVSDYHEHGSLFDYL----NRY-TVTVEGMIKLALSTASGLAHLHMEIVG 148
Query: 114 --ADPPIVHRDIKASNVLLDGNFHPKIGDFGLA---KLFPDNVTHVSTRVAGTMGYLAPE 168
P I HRD+K+ N+L+ N I D GLA D + GT Y+APE
Sbjct: 149 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 208
Query: 169 YALLGQLT-------KKADVYSFGVLLLEI 191
L + K+AD+Y+ G++ EI
Sbjct: 209 -VLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 2 IGGGAFGVVYRGSLR------DGTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G GAFG VY G + Q+A+K L S+Q +FL E +I + H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK---SKYVSLDWPTRANICLGTASGLSFLH 111
IG ++ R ++ E + L + L ++ S+ SL ++ A G +L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 112 EEADPPIVHRDIKASNVLL----DGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT----MG 163
E +HRDI A N LL G KIGDFG+A+ D R G +
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR---DIYRASYYRKGGCAMLPVK 211
Query: 164 YLAPEYALLGQLTKKADVYSFGVLLLEIIS 193
++ PE + G T K D +SFGVLL EI S
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG G+ G+V ++R G +A+K + +Q + E+ ++ + +H N+V++ +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
+ +V E+LE +L + + ++ + A +CL LS LH + ++H
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG---VIH 270
Query: 121 RDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKAD 180
RDIK+ ++LL + K+ DFG V + GT ++APE + D
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVD 329
Query: 181 VYSFGVLLLEIISG 194
++S G++++E++ G
Sbjct: 330 IWSLGIMVIEMVDG 343
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 39/224 (17%)
Query: 2 IGGGAFGVVYRGSL-----RDG-TQIAIKCLSAE-SKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G FG V + + R G T +A+K L S ++ L+E +++ + HP++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKS------------KYVSLDWPTRANICLG 102
L G C +D +L+ EY + SL L S+ SLD P + +G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 103 --------TASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHV 154
+ G+ +L A+ +VHRD+ A N+L+ KI DFGL++ +V
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR----DVYEE 203
Query: 155 STRVAGTMGYLAPEYALLGQL-----TKKADVYSFGVLLLEIIS 193
+ V + G + ++ + L T ++DV+SFGVLL EI++
Sbjct: 204 DSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 29/210 (13%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG G FG V+RG R G ++A+K S+ E + +E EI +RH N++ I
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 106
Query: 61 EDNNRI----LVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE--- 113
+DN LV +Y E+ SL + L ++Y ++ + L TASGL+ LH E
Sbjct: 107 KDNGTWTQLWLVSDYHEHGSLFDYL----NRY-TVTVEGMIKLALSTASGLAHLHMEIVG 161
Query: 114 --ADPPIVHRDIKASNVLLDGNFHPKIGDFGLA---KLFPDNVTHVSTRVAGTMGYLAPE 168
P I HRD+K+ N+L+ N I D GLA D + GT Y+APE
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 221
Query: 169 YALLGQLT-------KKADVYSFGVLLLEI 191
L + K+AD+Y+ G++ EI
Sbjct: 222 -VLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG G+ G+V ++R G +A+K + +Q + E+ ++ + +H N+V++ +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
+ +V E+LE +L + + ++ + A +CL LS LH + ++H
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG---VIH 150
Query: 121 RDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKAD 180
RDIK+ ++LL + K+ DFG V + GT ++APE + D
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVD 209
Query: 181 VYSFGVLLLEIISG 194
++S G++++E++ G
Sbjct: 210 IWSLGIMVIEMVDG 223
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 2 IGGGAFGVVYRGSLR------DGTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G GAFG VY G + Q+A+K L S+Q +FL E +I H N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK---SKYVSLDWPTRANICLGTASGLSFLH 111
IG ++ R ++ E + L + L ++ S+ SL ++ A G +L
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 112 EEADPPIVHRDIKASNVLL----DGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT----MG 163
E +HRDI A N LL G KIGDFG+A+ D R G +
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR---DIYRASYYRKGGCAMLPVK 210
Query: 164 YLAPEYALLGQLTKKADVYSFGVLLLEIIS 193
++ PE + G T K D +SFGVLL EI S
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG G+ G+V ++R G +A+K + +Q + E+ ++ + +H N+V++ +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
+ +V E+LE +L + + ++ + A +CL LS LH + ++H
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG---VIH 139
Query: 121 RDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKAD 180
RDIK+ ++LL + K+ DFG V + GT ++APE + D
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVD 198
Query: 181 VYSFGVLLLEIISG 194
++S G++++E++ G
Sbjct: 199 IWSLGIMVIEMVDG 212
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG G+ G+V ++R G +A+K + +Q + E+ ++ + +H N+V++ +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
+ +V E+LE +L + + ++ + A +CL LS LH + ++H
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG---VIH 193
Query: 121 RDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKAD 180
RDIK+ ++LL + K+ DFG V + GT ++APE + D
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVD 252
Query: 181 VYSFGVLLLEIISG 194
++S G++++E++ G
Sbjct: 253 IWSLGIMVIEMVDG 266
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 2 IGGGAFGVVYRGSLR------DGTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G GAFG VY G + Q+A+K L S+Q +FL E +I H N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK---SKYVSLDWPTRANICLGTASGLSFLH 111
IG ++ R ++ E + L + L ++ S+ SL ++ A G +L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 112 EEADPPIVHRDIKASNVLL----DGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT----MG 163
E +HRDI A N LL G KIGDFG+A+ D R G +
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR---DIYRASYYRKGGCAMLPVK 225
Query: 164 YLAPEYALLGQLTKKADVYSFGVLLLEIIS 193
++ PE + G T K D +SFGVLL EI S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 128/292 (43%), Gaps = 38/292 (13%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT-KEFLTEIDMIWNI-RHPNLVQLIGC 58
+I AFG+ + R +A+K L + + ++E+ ++ +I H N+V L+G
Sbjct: 44 VIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 100
Query: 59 CVEDNNRILV-YEYLENNSLANALLGSKSKYVSLDWPTRAN---------IC--LGTASG 106
C + ++V E+ + +L+ L ++++V P IC A G
Sbjct: 101 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKG 160
Query: 107 LSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF---PDNVTHVSTRVAGTMG 163
+ FL A +HRD+ A N+LL KI DFGLA+ PD V R+ +
Sbjct: 161 MEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP--LK 215
Query: 164 YLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLL 223
++APE T ++DV+SFGVLL EI S +S D E+ +L+E R+
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLKEGTRM- 270
Query: 224 EIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLNEK 275
+ P+ + L C RPT ++VE L + N +
Sbjct: 271 --------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 314
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG G+ G+V ++R G +A+K + +Q + E+ ++ + +H N+V++ +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
+ +V E+LE +L + + ++ + A +CL LS LH + ++H
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG---VIH 143
Query: 121 RDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKAD 180
RDIK+ ++LL + K+ DFG V + GT ++APE + D
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVD 202
Query: 181 VYSFGVLLLEIISG 194
++S G++++E++ G
Sbjct: 203 IWSLGIMVIEMVDG 216
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 2 IGGGAFGVVYRGSLR------DGTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G GAFG VY G + Q+A+K L S+Q +FL E +I + H N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK---SKYVSLDWPTRANICLGTASGLSFLH 111
IG ++ R ++ E + L + L ++ S+ SL ++ A G +L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 112 EEADPPIVHRDIKASNVLL----DGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT----MG 163
E +HRDI A N LL G KIGDFG+A+ D R G +
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR---DIYRASYYRKGGCAMLPVK 225
Query: 164 YLAPEYALLGQLTKKADVYSFGVLLLEIIS 193
++ PE + G T K D +SFGVLL EI S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 14/214 (6%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAES--KQGTKEFLT-EIDMIWNIRHPNLVQLI 56
++G G+F VV L + AIK L K+ ++T E D++ + HP V+L
Sbjct: 44 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 103
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
C +D Y +N L + K S D S L +LH +
Sbjct: 104 FCFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 157
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
I+HRD+K N+LL+ + H +I DFG AK L P++ + GT Y++PE
Sbjct: 158 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 216
Query: 176 TKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
K +D+++ G ++ ++++G +A G++ LI
Sbjct: 217 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIF 248
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 2 IGGGAFGVVYRGSLR------DGTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G GAFG VY G + Q+A+K L S+Q +FL E +I H N+V+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK---SKYVSLDWPTRANICLGTASGLSFLH 111
IG ++ R ++ E + L + L ++ S+ SL ++ A G +L
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 112 EEADPPIVHRDIKASNVLL----DGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT----MG 163
E +HRDI A N LL G KIGDFG+A+ D R G +
Sbjct: 175 ENH---FIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR---DIYRASYYRKGGCAMLPVK 227
Query: 164 YLAPEYALLGQLTKKADVYSFGVLLLEIIS 193
++ PE + G T K D +SFGVLL EI S
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 2 IGGGAFGVVYRGSLR------DGTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G GAFG VY G + Q+A+K L S+Q +FL E +I H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK---SKYVSLDWPTRANICLGTASGLSFLH 111
IG ++ R ++ E + L + L ++ S+ SL ++ A G +L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 112 EEADPPIVHRDIKASNVLL----DGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT----MG 163
E +HRDI A N LL G KIGDFG+A+ D R G +
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR---DIYRASYYRKGGCAMLPVK 211
Query: 164 YLAPEYALLGQLTKKADVYSFGVLLLEIIS 193
++ PE + G T K D +SFGVLL EI S
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 106/216 (49%), Gaps = 34/216 (15%)
Query: 1 MIGGGAFGVVYRGSLR-DGTQI--AIKCLSA-ESKQGTKEFLTEIDMIWNI-RHPNLVQL 55
+IG G FG V + ++ DG ++ AIK + SK ++F E++++ + HPN++ L
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLS---FLHE 112
+G C L EY + +L + L KS+ + D P A I TAS LS LH
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFL--RKSRVLETD-PAFA-IANSTASTLSSQQLLHF 147
Query: 113 EAD----------PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTM 162
AD +HRD+ A N+L+ N+ KI DFGL++ V TM
Sbjct: 148 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKKTM 200
Query: 163 GYLAPEYALLGQL-----TKKADVYSFGVLLLEIIS 193
G L + + L T +DV+S+GVLL EI+S
Sbjct: 201 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 2 IGGGAFGVVYRGSLR------DGTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G GAFG VY G + Q+A+K L S+Q +FL E +I H N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK---SKYVSLDWPTRANICLGTASGLSFLH 111
IG ++ R ++ E + L + L ++ S+ SL ++ A G +L
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 112 EEADPPIVHRDIKASNVLL----DGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT----MG 163
E +HRDI A N LL G KIGDFG+A+ D R G +
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR---DIYRASYYRKGGCAMLPVK 210
Query: 164 YLAPEYALLGQLTKKADVYSFGVLLLEIIS 193
++ PE + G T K D +SFGVLL EI S
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 2 IGGGAFGVVYRGSLR------DGTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G GAFG VY G + Q+A+K L S+Q +FL E +I H N+V+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK---SKYVSLDWPTRANICLGTASGLSFLH 111
IG ++ R ++ E + L + L ++ S+ SL ++ A G +L
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 112 EEADPPIVHRDIKASNVLL----DGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT----MG 163
E +HRDI A N LL G KIGDFG+A+ D R G +
Sbjct: 165 ENH---FIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR---DIYRASYYRKGGCAMLPVK 217
Query: 164 YLAPEYALLGQLTKKADVYSFGVLLLEIIS 193
++ PE + G T K D +SFGVLL EI S
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 111/204 (54%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 83 LLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 134
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFGLAKL + + + + ++A E
Sbjct: 135 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 191
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 111/204 (54%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 32 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 91
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 92 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 143
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFGLAKL + + + + ++A E
Sbjct: 144 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 200
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 201 ILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 106/216 (49%), Gaps = 34/216 (15%)
Query: 1 MIGGGAFGVVYRGSLR-DGTQI--AIKCLSA-ESKQGTKEFLTEIDMIWNI-RHPNLVQL 55
+IG G FG V + ++ DG ++ AIK + SK ++F E++++ + HPN++ L
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLS---FLHE 112
+G C L EY + +L + L KS+ + D P A I TAS LS LH
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFL--RKSRVLETD-PAFA-IANSTASTLSSQQLLHF 137
Query: 113 EAD----------PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTM 162
AD +HRD+ A N+L+ N+ KI DFGL++ V TM
Sbjct: 138 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKKTM 190
Query: 163 GYLAPEYALLGQL-----TKKADVYSFGVLLLEIIS 193
G L + + L T +DV+S+GVLL EI+S
Sbjct: 191 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 111/204 (54%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 82 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 133
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFGLAKL + + + + ++A E
Sbjct: 134 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 111/204 (54%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 83 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 134
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFGLAKL + + + + ++A E
Sbjct: 135 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 191
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 2 IGGGAFGVVYRGSLR------DGTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G GAFG VY G + Q+A+K L S+Q +FL E +I H N+V+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK---SKYVSLDWPTRANICLGTASGLSFLH 111
IG ++ R ++ E + L + L ++ S+ SL ++ A G +L
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 112 EEADPPIVHRDIKASNVLL----DGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT----MG 163
E +HRDI A N LL G KIGDFG+A+ D R G +
Sbjct: 150 ENH---FIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR---DIYRASYYRKGGCAMLPVK 202
Query: 164 YLAPEYALLGQLTKKADVYSFGVLLLEIIS 193
++ PE + G T K D +SFGVLL EI S
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 2 IGGGAFGVVYRGSLR------DGTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G GAFG VY G + Q+A+K L S+Q +FL E +I H N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK---SKYVSLDWPTRANICLGTASGLSFLH 111
IG ++ R ++ E + L + L ++ S+ SL ++ A G +L
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 112 EEADPPIVHRDIKASNVLL----DGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT----MG 163
E +HRDI A N LL G KIGDFG+A+ D R G +
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR---DIYRASYYRKGGCAMLPVK 225
Query: 164 YLAPEYALLGQLTKKADVYSFGVLLLEIIS 193
++ PE + G T K D +SFGVLL EI S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 111/204 (54%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 85 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 136
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFGLAKL + + + + ++A E
Sbjct: 137 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 111/204 (54%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 86 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 137
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFGLAKL + + + + ++A E
Sbjct: 138 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 194
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 195 ILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 98/211 (46%), Gaps = 27/211 (12%)
Query: 2 IGGGAFGVVYRGSLR------DGTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G GAFG VY G + Q+A+K L S+Q +FL E +I H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK---SKYVSLDWPTRANICLGTASGLSFLH 111
IG ++ R ++ E + L + L ++ S+ SL ++ A G +L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 112 EEADPPIVHRDIKASNVLL----DGNFHPKIGDFGLAKLFPDNVTHVSTRVAG-----TM 162
E +HRDI A N LL G KIGDFG+A+ ++ S G +
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVA-KIGDFGMAQ----DIYRASYYRKGGCAMLPV 210
Query: 163 GYLAPEYALLGQLTKKADVYSFGVLLLEIIS 193
++ PE + G T K D +SFGVLL EI S
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 111/204 (54%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 16 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 75
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 76 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 127
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFGLAKL + + + + ++A E
Sbjct: 128 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 184
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 185 ILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 106/225 (47%), Gaps = 26/225 (11%)
Query: 5 GAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC----CV 60
G FG V++ L + +A+K + KQ + E+ + ++H N++Q IG
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY-EVYSLPGMKHENILQFIGAEKRGTS 92
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA------ 114
D + L+ + E SL++ L K+ VS W +I A GL++LHE+
Sbjct: 93 VDVDLWLITAFHEKGSLSDFL---KANVVS--WNELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 115 -DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTR-VAGTMGYLAPEYALL 172
P I HRDIK+ NVLL N I DFGLA F + T GT Y+APE L
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE-VLE 206
Query: 173 GQLT------KKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVE 211
G + + D+Y+ G++L E+ S +++ + ML E
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEE 251
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 111/204 (54%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 133
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFGLAKL + + + + ++A E
Sbjct: 134 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 109/204 (53%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQIAIKCLSAESKQGT-----KEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ I E ++ T KE L E ++ ++ +P++ +
Sbjct: 56 VLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCR 115
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 116 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 167
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFGLAKL + + + + ++A E
Sbjct: 168 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 224
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 225 ILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 111/204 (54%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 28 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 87
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 88 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 139
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFGLAKL + + + + ++A E
Sbjct: 140 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 196
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 197 ILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 111/204 (54%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 85 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 136
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFGLAKL + + + + ++A E
Sbjct: 137 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 111/204 (54%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 84 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 135
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFGLAKL + + + + ++A E
Sbjct: 136 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 111/204 (54%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 133
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFGLAKL + + + + ++A E
Sbjct: 134 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 111/204 (54%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 19 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 78
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 79 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAEGMNYL 130
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFGLAKL + + + + ++A E
Sbjct: 131 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 187
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 188 ILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 111/204 (54%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 133
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFGLAKL + + + + ++A E
Sbjct: 134 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 111/204 (54%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 84 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 135
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFGLAKL + + + + ++A E
Sbjct: 136 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 111/204 (54%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 89 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 140
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFGLAKL + + + + ++A E
Sbjct: 141 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 130/287 (45%), Gaps = 35/287 (12%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT-KEFLTEIDMIWNI-RHPNLVQLIGC 58
+I AFG+ + R +A+K L + + ++E+ ++ +I H N+V L+G
Sbjct: 43 VIEADAFGIDKTATXR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 99
Query: 59 CVEDNNRILV-YEYLENNSLANALLGSKSKYVSL-----DWPTRAN-IC--LGTASGLSF 109
C + ++V E+ + +L+ L ++++V D+ T + IC A G+ F
Sbjct: 100 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEF 159
Query: 110 LHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF---PDNVTHVSTRVAGTMGYLA 166
L A +HRD+ A N+LL KI DFGLA+ PD V R+ + ++A
Sbjct: 160 L---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP--LKWMA 214
Query: 167 PEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIV 226
PE T ++DV+SFGVLL EI S +S D E+ +L+E R+
Sbjct: 215 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLKEGTRM---- 266
Query: 227 DPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLN 273
+ P+ + L C RPT ++VE L + N
Sbjct: 267 -----RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 308
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 111/204 (54%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 85 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 136
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFGLAKL + + + + ++A E
Sbjct: 137 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 92/197 (46%), Gaps = 14/197 (7%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY R I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL----QKLSRFDEQRTATYITELANALSYCHSKR--- 132
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL N KI DFG + P + T + GT+ YL PE +
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSS---RRTTLCGTLDYLPPEMIEGRMHDE 189
Query: 178 KADVYSFGVLLLEIISG 194
K D++S GVL E + G
Sbjct: 190 KVDLWSLGVLCYEFLVG 206
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 104/221 (47%), Gaps = 31/221 (14%)
Query: 1 MIGGGAFGVVYR----GSLRDGT--QIAIKCLSAESKQGTKE-FLTEIDMIWNI-RHPNL 52
++G GAFG V G + G Q+A+K L ++ +E ++E+ M+ + H N+
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 53 VQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVS--LDWPTRANI----------- 99
V L+G C L++EY L N L + K+ +++ + +
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 100 ----CLG--TASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVT 152
C A G+ FL ++ VHRD+ A NVL+ KI DFGLA+ + D+
Sbjct: 172 EDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 153 HVSTRVAGTMGYLAPEYALLGQLTKKADVYSFGVLLLEIIS 193
V + ++APE G T K+DV+S+G+LL EI S
Sbjct: 229 VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 111/204 (54%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 85 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 136
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFGLAKL + + + + ++A E
Sbjct: 137 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 2 IGGGAFGVVYRGSLR------DGTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G GAFG VY G + Q+A+K L S+Q +FL E +I H N+V+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK---SKYVSLDWPTRANICLGTASGLSFLH 111
IG ++ R ++ E + L + L ++ S+ SL ++ A G +L
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 112 EEADPPIVHRDIKASNVLL----DGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT----MG 163
E +HRDI A N LL G KIGDFG+A+ D R G +
Sbjct: 199 ENH---FIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR---DIYRAGYYRKGGCAMLPVK 251
Query: 164 YLAPEYALLGQLTKKADVYSFGVLLLEIIS 193
++ PE + G T K D +SFGVLL EI S
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 2 IGGGAFGVVYRGSLR------DGTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G GAFG VY G + Q+A+K L S+Q +FL E +I H N+V+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK---SKYVSLDWPTRANICLGTASGLSFLH 111
IG ++ R ++ E + L + L ++ S+ SL ++ A G +L
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 112 EEADPPIVHRDIKASNVLL----DGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT----MG 163
E +HRDI A N LL G KIGDFG+A+ D R G +
Sbjct: 176 ENH---FIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR---DIYRAGYYRKGGCAMLPVK 228
Query: 164 YLAPEYALLGQLTKKADVYSFGVLLLEIIS 193
++ PE + G T K D +SFGVLL EI S
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 111/204 (54%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 47 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 106
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 107 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 158
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFGLAKL + + + + ++A E
Sbjct: 159 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 215
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 216 ILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 111/209 (53%), Gaps = 21/209 (10%)
Query: 1 MIGGGAFGVVYRGSLR--DGT--QIAIKCLSAE--SKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G G FG V G+L+ DGT ++A+K + + S++ +EFL+E + + HPN+++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 55 LIGCCVEDNNR-----ILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTAS 105
L+G C+E +++ +++ +++ L LL S+ K++ L T + A
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQ--TLLKFMVDIAL 158
Query: 106 GLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT-MGY 164
G+ +L ++ +HRD+ A N +L + + DFGL+K + R+A + +
Sbjct: 159 GMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 165 LAPEYALLGQLTKKADVYSFGVLLLEIIS 193
+A E T K+DV++FGV + EI +
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 129/278 (46%), Gaps = 34/278 (12%)
Query: 1 MIGGGAFGVVYRGS-LRDGTQIAIK-CLSA-ESKQGTKEFLTEID---MIWNIRHPNLVQ 54
++G G FG V++G + +G I I C+ E K G + F D I ++ H ++V+
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 97
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALL---GSKSKYVSLDWPTRANICLGTASGLSFLH 111
L+G C ++ LV +YL SL + + G+ + L+W + A G+ +L
Sbjct: 98 LLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYLE 150
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEYA 170
E +VHR++ A NVLL ++ DFG+A L PD+ + + + ++A E
Sbjct: 151 EHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 207
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPEL 230
G+ T ++DV+S+GV + E+++ + A +L E LLE E
Sbjct: 208 HFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL------------RLAEVPDLLE--KGER 253
Query: 231 TQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
P+ + V + C + RPT K++ ++
Sbjct: 254 LAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTR 291
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 129/287 (44%), Gaps = 35/287 (12%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT-KEFLTEIDMIWNI-RHPNLVQLIGC 58
+I AFG+ + R +A+K L + + ++E+ ++ +I H N+V L+G
Sbjct: 43 VIEADAFGIDKTATXR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 99
Query: 59 CVEDNNRILV-YEYLENNSLANALLGSKSKYVSL-----DWPTRANI---CLGTASGLSF 109
C + ++V E+ + +L+ L ++++V D+ T ++ A G+ F
Sbjct: 100 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEF 159
Query: 110 LHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF---PDNVTHVSTRVAGTMGYLA 166
L A +HRD+ A N+LL KI DFGLA+ PD V R+ + ++A
Sbjct: 160 L---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP--LKWMA 214
Query: 167 PEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIV 226
PE T ++DV+SFGVLL EI S +S D E+ +L+E R+
Sbjct: 215 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFXRRLKEGTRM---- 266
Query: 227 DPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLN 273
+ P+ + L C RPT ++VE L + N
Sbjct: 267 -----RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 308
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 129/278 (46%), Gaps = 34/278 (12%)
Query: 1 MIGGGAFGVVYRGS-LRDGTQIAIK-CLSA-ESKQGTKEFLTEID---MIWNIRHPNLVQ 54
++G G FG V++G + +G I I C+ E K G + F D I ++ H ++V+
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALL---GSKSKYVSLDWPTRANICLGTASGLSFLH 111
L+G C ++ LV +YL SL + + G+ + L+W + A G+ +L
Sbjct: 80 LLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYLE 132
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEYA 170
E +VHR++ A NVLL ++ DFG+A L PD+ + + + ++A E
Sbjct: 133 EHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 189
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPEL 230
G+ T ++DV+S+GV + E+++ + A +L E LLE E
Sbjct: 190 HFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL------------RLAEVPDLLE--KGER 235
Query: 231 TQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
P+ + V + C + RPT K++ ++
Sbjct: 236 LAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTR 273
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 131/293 (44%), Gaps = 39/293 (13%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT-KEFLTEIDMIWNI-RHPNLVQLIGC 58
+I AFG+ + R +A+K L + + ++E+ ++ +I H N+V L+G
Sbjct: 34 VIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 90
Query: 59 CVEDNNRILV-YEYLENNSLANALLGSKSKYVSL---------DWPTRAN-IC--LGTAS 105
C + ++V E+ + +L+ L ++++V D+ T + IC A
Sbjct: 91 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAK 150
Query: 106 GLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF---PDNVTHVSTRVAGTM 162
G+ FL A +HRD+ A N+LL KI DFGLA+ PD V R+ +
Sbjct: 151 GMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP--L 205
Query: 163 GYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
++APE T ++DV+SFGVLL EI S +S D E+ +L+E R+
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLKEGTRM 261
Query: 223 LEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLNEK 275
+ P+ + L C RPT ++VE L + N +
Sbjct: 262 ---------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 305
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 131/293 (44%), Gaps = 39/293 (13%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT-KEFLTEIDMIWNI-RHPNLVQLIGC 58
+I AFG+ + R +A+K L + + ++E+ ++ +I H N+V L+G
Sbjct: 43 VIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 99
Query: 59 CVEDNNRILV-YEYLENNSLANALLGSKSKYVSL---------DWPTRAN-IC--LGTAS 105
C + ++V E+ + +L+ L ++++V D+ T + IC A
Sbjct: 100 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAK 159
Query: 106 GLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF---PDNVTHVSTRVAGTM 162
G+ FL A +HRD+ A N+LL KI DFGLA+ PD V R+ +
Sbjct: 160 GMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP--L 214
Query: 163 GYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
++APE T ++DV+SFGVLL EI S +S D E+ +L+E R+
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLKEGTRM 270
Query: 223 LEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLNEK 275
+ P+ + L C RPT ++VE L + N +
Sbjct: 271 ---------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 314
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 116/266 (43%), Gaps = 28/266 (10%)
Query: 2 IGGGAFGVVYRGSLRDGTQ--IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGC 58
IG G+FG V++G + + TQ +AIK + E + E + EI ++ P + + G
Sbjct: 15 IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 73
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
++D ++ EYL S + L LD A I GL +LH E
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSEKK--- 125
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
+HRDIKA+NVLL + K+ DFG+A D +T V GT ++APE K
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSK 184
Query: 179 ADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFPEKEV 238
AD++S G+ +E+ G +L L+ EG K +
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY------------SKPL 232
Query: 239 MRFIKVGLFCTQAGAHYRPTMKQVVE 264
F++ C +RPT K++++
Sbjct: 233 KEFVEA---CLNKEPSFRPTAKELLK 255
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 131/293 (44%), Gaps = 39/293 (13%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT-KEFLTEIDMIWNI-RHPNLVQLIGC 58
+I AFG+ + R +A+K L + + ++E+ ++ +I H N+V L+G
Sbjct: 34 VIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 90
Query: 59 CVEDNNRILVY-EYLENNSLANALLGSKSKYVSL---------DWPTRAN-IC--LGTAS 105
C + ++V E+ + +L+ L ++++V D+ T + IC A
Sbjct: 91 CTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAK 150
Query: 106 GLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF---PDNVTHVSTRVAGTM 162
G+ FL A +HRD+ A N+LL KI DFGLA+ PD V R+ +
Sbjct: 151 GMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP--L 205
Query: 163 GYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
++APE T ++DV+SFGVLL EI S +S D E+ +L+E R+
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLKEGTRM 261
Query: 223 LEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLNEK 275
+ P+ + L C RPT ++VE L + N +
Sbjct: 262 ---------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 305
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 131/293 (44%), Gaps = 39/293 (13%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT-KEFLTEIDMIWNI-RHPNLVQLIGC 58
+I AFG+ + R +A+K L + + ++E+ ++ +I H N+V L+G
Sbjct: 43 VIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 99
Query: 59 CVEDNNRILV-YEYLENNSLANALLGSKSKYVSL---------DWPTRAN-IC--LGTAS 105
C + ++V E+ + +L+ L ++++V D+ T + IC A
Sbjct: 100 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAK 159
Query: 106 GLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF---PDNVTHVSTRVAGTM 162
G+ FL A +HRD+ A N+LL KI DFGLA+ PD V R+ +
Sbjct: 160 GMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLP--L 214
Query: 163 GYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
++APE T ++DV+SFGVLL EI S +S D E+ +L+E R+
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLKEGTRM 270
Query: 223 LEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLNEK 275
+ P+ + L C RPT ++VE L + N +
Sbjct: 271 ---------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 314
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 116/266 (43%), Gaps = 28/266 (10%)
Query: 2 IGGGAFGVVYRGSLRDGTQ--IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGC 58
IG G+FG V++G + + TQ +AIK + E + E + EI ++ P + + G
Sbjct: 35 IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 93
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
++D ++ EYL S + L LD A I GL +LH E
Sbjct: 94 YLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSEKK--- 145
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
+HRDIKA+NVLL + K+ DFG+A D +T V GT ++APE K
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDSK 204
Query: 179 ADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFPEKEV 238
AD++S G+ +E+ G +L L+ EG K +
Sbjct: 205 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY------------SKPL 252
Query: 239 MRFIKVGLFCTQAGAHYRPTMKQVVE 264
F++ C +RPT K++++
Sbjct: 253 KEFVEA---CLNKEPSFRPTAKELLK 275
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 130/291 (44%), Gaps = 37/291 (12%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT-KEFLTEIDMIWNI-RHPNLVQLIGC 58
+I AFG+ + R +A+K L + + ++E+ ++ +I H N+V L+G
Sbjct: 45 VIEADAFGIDKTATXR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 101
Query: 59 CVEDNNRILV-YEYLENNSLANALLGSKSKYVSL-------DWPTRANI---CLGTASGL 107
C + ++V E+ + +L+ L ++++V D+ T ++ A G+
Sbjct: 102 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGM 161
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF---PDNVTHVSTRVAGTMGY 164
FL A +HRD+ A N+LL KI DFGLA+ PD V R+ + +
Sbjct: 162 EFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP--LKW 216
Query: 165 LAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLE 224
+APE T ++DV+SFGVLL EI S +S D E+ +L+E R+
Sbjct: 217 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLKEGTRM-- 270
Query: 225 IVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLNEK 275
+ P+ + L C RPT ++VE L + N +
Sbjct: 271 -------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 314
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 131/293 (44%), Gaps = 39/293 (13%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT-KEFLTEIDMIWNI-RHPNLVQLIGC 58
+I AFG+ + R +A+K L + + ++E+ ++ +I H N+V L+G
Sbjct: 80 VIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 136
Query: 59 CVEDNNRILV-YEYLENNSLANALLGSKSKYVSL---------DWPTRAN-IC--LGTAS 105
C + ++V E+ + +L+ L ++++V D+ T + IC A
Sbjct: 137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAK 196
Query: 106 GLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF---PDNVTHVSTRVAGTM 162
G+ FL A +HRD+ A N+LL KI DFGLA+ PD V R+ +
Sbjct: 197 GMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP--L 251
Query: 163 GYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
++APE T ++DV+SFGVLL EI S +S D E+ +L+E R+
Sbjct: 252 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLKEGTRM 307
Query: 223 LEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLNEK 275
+ P+ + L C RPT ++VE L + N +
Sbjct: 308 ---------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 351
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 39/292 (13%)
Query: 2 IGGGAFGVVYRGSLRD------GTQIAIKCLSAESKQGTKE-FLTEIDMIWNI-RHPNLV 53
+G GAFG V + +A+K L + +E ++E+ ++ + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 54 QLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYV-SLDWPT-------------RANI 99
L+G C +++ EY L N L + ++ S P +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G++FL A +HRD+ A N+LL KI DFGLA+ ++ +V A
Sbjct: 174 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 160 G-TMGYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLRE 218
+ ++APE T ++DV+S+G+ L E+ S SS D +K+ +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF-----YKMIK 285
Query: 219 EGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDV 270
EG ++ PE ++M+ C A RPT KQ+V+++ K +
Sbjct: 286 EG--FRMLSPEHAPAEMYDIMK------TCWDADPLKRPTFKQIVQLIEKQI 329
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 131/293 (44%), Gaps = 39/293 (13%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT-KEFLTEIDMIWNI-RHPNLVQLIGC 58
+I AFG+ + R +A+K L + + ++E+ ++ +I H N+V L+G
Sbjct: 45 VIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 101
Query: 59 CVEDNNRILV-YEYLENNSLANALLGSKSKYVSL---------DWPTRAN-IC--LGTAS 105
C + ++V E+ + +L+ L ++++V D+ T + IC A
Sbjct: 102 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAK 161
Query: 106 GLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF---PDNVTHVSTRVAGTM 162
G+ FL A +HRD+ A N+LL KI DFGLA+ PD V R+ +
Sbjct: 162 GMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP--L 216
Query: 163 GYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
++APE T ++DV+SFGVLL EI S +S D E+ +L+E R+
Sbjct: 217 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLKEGTRM 272
Query: 223 LEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLNEK 275
+ P+ + L C RPT ++VE L + N +
Sbjct: 273 ---------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 316
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 106/216 (49%), Gaps = 34/216 (15%)
Query: 1 MIGGGAFGVVYRGSLR-DGTQI--AIKCLSA-ESKQGTKEFLTEIDMIWNI-RHPNLVQL 55
+IG G FG V + ++ DG ++ AIK + SK ++F E++++ + HPN++ L
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLS---FLHE 112
+G C L EY + +L + L KS+ + D P A I TAS LS LH
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFL--RKSRVLETD-PAFA-IANSTASTLSSQQLLHF 144
Query: 113 EAD----------PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTM 162
AD +HR++ A N+L+ N+ KI DFGL++ V TM
Sbjct: 145 AADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR-------GQEVYVKKTM 197
Query: 163 GYLAPEYALLGQL-----TKKADVYSFGVLLLEIIS 193
G L + + L T +DV+S+GVLL EI+S
Sbjct: 198 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 126/280 (45%), Gaps = 26/280 (9%)
Query: 2 IGGGAFGVV---YRGSLRDGT--QIAIKCLSAES-KQGTKEFLTEIDMIWNIRHPNLVQL 55
+G G FG V DGT +A+K L Q + EI+++ + H ++V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 56 IGCCVEDNNRI--LVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFL 110
GCC + + LV EY+ LGS Y+ A + L G+++L
Sbjct: 76 KGCCEDQGEKSVQLVMEYVP--------LGSLRDYLPRHCVGLAQLLLFAQQICEGMAYL 127
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAG--TMGYLAPE 168
H + +HR + A NVLLD + KIGDFGLAK P+ + R G + + APE
Sbjct: 128 HAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 184
Query: 169 YALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDP 228
+ +DV+SFGV L E+++ S+++ L+ T RL E+++
Sbjct: 185 CLKECKFYYASDVWSFGVTLYELLTYCDSNQSPH-TKFTELIGHTQGQMTVLRLTELLER 243
Query: 229 -ELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
E P++ + C + A +RPT + +V +L
Sbjct: 244 GERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQ 283
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 131/293 (44%), Gaps = 39/293 (13%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT-KEFLTEIDMIWNI-RHPNLVQLIGC 58
+I AFG+ + R +A+K L + + ++E+ ++ +I H N+V L+G
Sbjct: 43 VIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 99
Query: 59 CVEDNNRILV-YEYLENNSLANALLGSKSKYVSL---------DWPTRAN-IC--LGTAS 105
C + ++V E+ + +L+ L ++++V D+ T + IC A
Sbjct: 100 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAK 159
Query: 106 GLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF---PDNVTHVSTRVAGTM 162
G+ FL A +HRD+ A N+LL KI DFGLA+ PD V R+ +
Sbjct: 160 GMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP--L 214
Query: 163 GYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
++APE T ++DV+SFGVLL EI S +S D E+ +L+E R+
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLKEGTRM 270
Query: 223 LEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLNEK 275
+ P+ + L C RPT ++VE L + N +
Sbjct: 271 ---------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 314
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 131/293 (44%), Gaps = 39/293 (13%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT-KEFLTEIDMIWNI-RHPNLVQLIGC 58
+I AFG+ + R +A+K L + + ++E+ ++ +I H N+V L+G
Sbjct: 34 VIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 90
Query: 59 CVEDNNRILVY-EYLENNSLANALLGSKSKYVSL---------DWPTRAN-IC--LGTAS 105
C + ++V E+ + +L+ L ++++V D+ T + IC A
Sbjct: 91 CTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAK 150
Query: 106 GLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF---PDNVTHVSTRVAGTM 162
G+ FL A +HRD+ A N+LL KI DFGLA+ PD V R+ +
Sbjct: 151 GMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP--L 205
Query: 163 GYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
++APE T ++DV+SFGVLL EI S +S D E+ +L+E R+
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLKEGTRM 261
Query: 223 LEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLNEK 275
+ P+ + L C RPT ++VE L + N +
Sbjct: 262 ---------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 305
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 39/292 (13%)
Query: 2 IGGGAFGVVYRGSLRD------GTQIAIKCLSAESKQGTKE-FLTEIDMIWNI-RHPNLV 53
+G GAFG V + +A+K L + +E ++E+ ++ + H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 54 QLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYV-SLDWPT-------------RANI 99
L+G C +++ EY L N L + ++ S P +
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G++FL A +HRD+ A N+LL KI DFGLA+ ++ +V A
Sbjct: 169 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 160 G-TMGYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLRE 218
+ ++APE T ++DV+S+G+ L E+ S SS D +K+ +
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF-----YKMIK 280
Query: 219 EGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDV 270
EG ++ PE ++M+ C A RPT KQ+V+++ K +
Sbjct: 281 EG--FRMLSPEHAPAEMYDIMK------TCWDADPLKRPTFKQIVQLIEKQI 324
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 131/293 (44%), Gaps = 39/293 (13%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT-KEFLTEIDMIWNI-RHPNLVQLIGC 58
+I AFG+ + R +A+K L + + ++E+ ++ +I H N+V L+G
Sbjct: 34 VIEADAFGIDKTATCR---TVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 90
Query: 59 CVEDNNRILVY-EYLENNSLANALLGSKSKYVSL---------DWPTRAN-IC--LGTAS 105
C + ++V E+ + +L+ L ++++V D+ T + IC A
Sbjct: 91 CTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAK 150
Query: 106 GLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF---PDNVTHVSTRVAGTM 162
G+ FL A +HRD+ A N+LL KI DFGLA+ PD V R+ +
Sbjct: 151 GMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP--L 205
Query: 163 GYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
++APE T ++DV+SFGVLL EI S +S D E+ +L+E R+
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLKEGTRM 261
Query: 223 LEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLNEK 275
+ P+ + L C RPT ++VE L + N +
Sbjct: 262 ---------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 305
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 126/280 (45%), Gaps = 26/280 (9%)
Query: 2 IGGGAFGVV---YRGSLRDGT--QIAIKCLSAES-KQGTKEFLTEIDMIWNIRHPNLVQL 55
+G G FG V DGT +A+K L Q + EI+++ + H ++V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 56 IGCCVEDNNRI--LVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFL 110
GCC + + LV EY+ LGS Y+ A + L G+++L
Sbjct: 77 KGCCEDQGEKSVQLVMEYVP--------LGSLRDYLPRHCVGLAQLLLFAQQICEGMAYL 128
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAG--TMGYLAPE 168
H + +HR + A NVLLD + KIGDFGLAK P+ + R G + + APE
Sbjct: 129 HAQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 185
Query: 169 YALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDP 228
+ +DV+SFGV L E+++ S+++ L+ T RL E+++
Sbjct: 186 CLKECKFYYASDVWSFGVTLYELLTYCDSNQSPH-TKFTELIGHTQGQMTVLRLTELLER 244
Query: 229 -ELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
E P++ + C + A +RPT + +V +L
Sbjct: 245 GERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQ 284
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 39/292 (13%)
Query: 2 IGGGAFGVVYRGSLRD------GTQIAIKCLSAESKQGTKE-FLTEIDMIWNI-RHPNLV 53
+G GAFG V + +A+K L + +E ++E+ ++ + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 54 QLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYV-SLDWPT-------------RANI 99
L+G C +++ EY L N L + ++ S P +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G++FL A +HRD+ A N+LL KI DFGLA+ ++ +V A
Sbjct: 174 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 160 G-TMGYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLRE 218
+ ++APE T ++DV+S+G+ L E+ S SS D +K+ +
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF-----YKMIK 285
Query: 219 EGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDV 270
EG ++ PE ++M+ C A RPT KQ+V+++ K +
Sbjct: 286 EG--FRMLSPEHAPAEMYDIMK------TCWDADPLKRPTFKQIVQLIEKQI 329
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 110/204 (53%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 86 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 137
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFG AKL + + + + ++A E
Sbjct: 138 E---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 194
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 195 ILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 107/241 (44%), Gaps = 22/241 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIK-CLSAESKQGTKEFLTEIDMIWNIRHPNLVQL---- 55
+G G FG V R +D G Q+AIK C S + + + EI ++ + HPN+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 56 --IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE 113
+ ++ +L EY E L L ++ + P R + +S L +LHE
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT-LLSDISSALRYLHEN 141
Query: 114 ADPPIVHRDIKASNVLLD---GNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I+HRD+K N++L KI D G AK + + T GT+ YLAPE
Sbjct: 142 R---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPELL 196
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPEL 230
+ T D +SFG L E I+G + V+W K+RE+ +V +L
Sbjct: 197 EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-----VQWHGKVREKSNEHIVVYDDL 251
Query: 231 T 231
T
Sbjct: 252 T 252
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 39/292 (13%)
Query: 2 IGGGAFGVVYRGSLRD------GTQIAIKCLSAESKQGTKE-FLTEIDMIWNI-RHPNLV 53
+G GAFG V + +A+K L + +E ++E+ ++ + H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 54 QLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYV-SLDWPT-------------RANI 99
L+G C +++ EY L N L + ++ S P +
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G++FL A +HRD+ A N+LL KI DFGLA+ ++ +V A
Sbjct: 167 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 160 G-TMGYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLRE 218
+ ++APE T ++DV+S+G+ L E+ S SS D +K+ +
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF-----YKMIK 278
Query: 219 EGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDV 270
EG ++ PE ++M+ C A RPT KQ+V+++ K +
Sbjct: 279 EG--FRMLSPEHAPAEMYDIMK------TCWDADPLKRPTFKQIVQLIEKQI 322
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIK-CLSAESKQGTKEFLTEIDMIWNIRHPNLVQL---- 55
+G G FG V R +D G Q+AIK C S + + + EI ++ + HPN+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 56 --IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE 113
+ ++ +L EY E L L ++ + P R + +S L +LHE
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT-LLSDISSALRYLHEN 140
Query: 114 ADPPIVHRDIKASNVLLD---GNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I+HRD+K N++L KI D G AK + + T GT+ YLAPE
Sbjct: 141 R---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPELL 195
Query: 171 LLGQLTKKADVYSFGVLLLEIISG 194
+ T D +SFG L E I+G
Sbjct: 196 EQKKYTVTVDYWSFGTLAFECITG 219
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 101/221 (45%), Gaps = 22/221 (9%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAI--KCLSAESKQGTKEF-LTEIDMIWNIRHPNLVQLIGC 58
IG G++GVV++ RD QI K L +E K+ L EI M+ ++HPNLV L+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 59 CVEDNNRILVYEYLEN---NSLANALLGSKSKYV-SLDWPTRANICLGTASGLSFLHEEA 114
LV+EY ++ + L G V S+ W T ++F H+
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITW--------QTLQAVNFCHKHN 122
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG- 173
+HRD+K N+L+ + K+ DFG A+L + VA T Y +PE L+G
Sbjct: 123 ---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA-TRWYRSPE-LLVGD 177
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWT 213
Q DV++ G + E++SG D L L+ T
Sbjct: 178 TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKT 218
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY R I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL----QKLSRFDEQRTATYITELANALSYCHSKR--- 132
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL N KI DFG + P + + GT+ YL PE +
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT---LCGTLDYLPPEMIEGRMHDE 189
Query: 178 KADVYSFGVLLLEIISG 194
K D++S GVL E + G
Sbjct: 190 KVDLWSLGVLCYEFLVG 206
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 128/296 (43%), Gaps = 39/296 (13%)
Query: 2 IGGGAFGVVYRGSL-----RDGT-QIAIKCLSAESKQGTKE-FLTEIDMIWNI-RHPNLV 53
+G GAFG V + D ++A+K L + + KE ++E+ ++ ++ +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 54 QLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRAN------------ICL 101
L+G C +++ EY L N L + + + N
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 102 GTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAG 160
A G++FL A +HRD+ A NVLL KIGDFGLA+ + D+ V
Sbjct: 174 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 161 TMGYLAPEYALLGQLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREE 219
+ ++APE T ++DV+S+G+LL EI S G + + +KL ++
Sbjct: 231 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF------YKLVKD 284
Query: 220 GRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLNEK 275
G ++ P F K + ++ C +RPT +Q+ L + + +
Sbjct: 285 G--YQMAQPA---FAPKNIYSIMQA---CWALEPTHRPTFQQICSFLQEQAQEDRR 332
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 39/292 (13%)
Query: 2 IGGGAFGVVYRGSLRD------GTQIAIKCLSAESKQGTKE-FLTEIDMIWNI-RHPNLV 53
+G GAFG V + +A+K L + +E ++E+ ++ + H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 54 QLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYV-SLDWPT-------------RANI 99
L+G C +++ EY L N L + ++ S P +
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 100 CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA 159
A G++FL A +HRD+ A N+LL KI DFGLA+ ++ +V A
Sbjct: 151 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 160 G-TMGYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLRE 218
+ ++APE T ++DV+S+G+ L E+ S SS D +K+ +
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF-----YKMIK 262
Query: 219 EGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDV 270
EG ++ PE ++M+ C A RPT KQ+V+++ K +
Sbjct: 263 EG--FRMLSPEHAPAEMYDIMK------TCWDADPLKRPTFKQIVQLIEKQI 306
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 129/289 (44%), Gaps = 31/289 (10%)
Query: 2 IGGGAFGVVYRGSL-----RDGT-QIAIKCLSAESKQGTKE-FLTEIDMIWNI-RHPNLV 53
+G GAFG V + D ++A+K L + + KE ++E+ ++ ++ +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 54 QLIGCCVEDNNRILVYEYLENNSLANALLG------SKSKYVSLDWPTRANICLGTASGL 107
L+G C +++ EY L N L K L+ + A G+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLA 166
+FL A +HRD+ A NVLL KIGDFGLA+ + D+ V + ++A
Sbjct: 174 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 230
Query: 167 PEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIV 226
PE T ++DV+S+G+LL EI S + +++ +KL ++G ++
Sbjct: 231 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG-----ILVNSKFYKLVKDG--YQMA 283
Query: 227 DPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLNEK 275
P F K + ++ C +RPT +Q+ L + + +
Sbjct: 284 QPA---FAPKNIYSIMQA---CWALEPTHRPTFQQICSFLQEQAQEDRR 326
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 126/286 (44%), Gaps = 33/286 (11%)
Query: 2 IGGGAFGVVYRGSL-----RDGT-QIAIKCLSAESKQGTKE-FLTEIDMIWNI-RHPNLV 53
+G GAFG V + D ++A+K L + + KE ++E+ ++ ++ +H N+V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 54 QLIGCCVEDNNRILVYEYLENNSLANALLG------SKSKYVSLDWPTRANICLGTASGL 107
L+G C +++ EY L N L K L+ + A G+
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLA 166
+FL A +HRD+ A NVLL KIGDFGLA+ + D+ V + ++A
Sbjct: 166 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 222
Query: 167 PEYALLGQLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLREEGRLLEI 225
PE T ++DV+S+G+LL EI S G + + +KL ++G ++
Sbjct: 223 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF------YKLVKDG--YQM 274
Query: 226 VDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
P F K + ++ C +RPT +Q+ L +
Sbjct: 275 AQPA---FAPKNIYSIMQA---CWALEPTHRPTFQQICSFLQEQAQ 314
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 110/204 (53%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 84 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 135
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFG AKL + + + + ++A E
Sbjct: 136 E---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 110/204 (53%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++ GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 89 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 140
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFGLAKL + + + + ++A E
Sbjct: 141 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 110/204 (53%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 84 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 135
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFG AKL + + + + ++A E
Sbjct: 136 E---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 95/194 (48%), Gaps = 10/194 (5%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG G+ G+V + G Q+A+K + +Q + E+ ++ + +H N+V++ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
++ E+L+ +L + + V L+ A +C L++LH + ++H
Sbjct: 113 VGEELWVLMEFLQGGALTDIV-----SQVRLNEEQIATVCEAVLQALAYLHAQG---VIH 164
Query: 121 RDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKAD 180
RDIK+ ++LL + K+ DFG +V + GT ++APE + D
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RKXLVGTPYWMAPEVISRSLYATEVD 223
Query: 181 VYSFGVLLLEIISG 194
++S G++++E++ G
Sbjct: 224 IWSLGIMVIEMVDG 237
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 110/204 (53%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++ GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 89 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 140
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFGLAKL + + + + ++A E
Sbjct: 141 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 110/204 (53%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 133
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFG AKL + + + + ++A E
Sbjct: 134 E---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 110/204 (53%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++ GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 22 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 133
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFGLAKL + + + + ++A E
Sbjct: 134 E---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 27/210 (12%)
Query: 2 IGGGAFGVVYRGSLRDG-TQIAIKCL----------SAESKQGTK---EFLTEIDMIWNI 47
+G GA+G V ++G ++ AIK + S ++K K E EI ++ ++
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 48 RHPNLVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGL 107
HPN+++L + LV E+ E L ++ D ANI SG+
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH----KFDECDAANIMKQILSGI 159
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGN---FHPKIGDFGLAKLFPDNVTHVSTRVAGTMGY 164
+LH+ IVHRDIK N+LL+ + KI DFGL+ F + + R+ GT Y
Sbjct: 160 CYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-LRDRL-GTAYY 214
Query: 165 LAPEYALLGQLTKKADVYSFGVLLLEIISG 194
+APE L + +K DV+S GV++ ++ G
Sbjct: 215 IAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 102/223 (45%), Gaps = 44/223 (19%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTE--IDMIWNIRHPNLVQLI-- 56
+IG G +G VY+GSL D +A+K S ++Q F+ E I + + H N+ + I
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARFIVG 75
Query: 57 GCCVEDNNR---ILVYEYLENNSLANALLGSKSKYVSL---DWPTRANICLGTASGLSFL 110
V + R +LV EY N GS KY+SL DW + + GL++L
Sbjct: 76 DERVTADGRMEYLLVMEYYPN--------GSLXKYLSLHTSDWVSSCRLAHSVTRGLAYL 127
Query: 111 HEE------ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-------PDNVTHVSTR 157
H E P I HRD+ + NVL+ + I DFGL+ P + +
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAIS 187
Query: 158 VAGTMGYLAPEYALLGQLT--------KKADVYSFGVLLLEII 192
GT+ Y+APE L G + K+ D+Y+ G++ EI
Sbjct: 188 EVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 110/204 (53%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 84 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 135
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFG AKL + + + + ++A E
Sbjct: 136 E---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY + L K D A A+ LS+ H +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKEL----QKLSKFDEQRTATYITELANALSYCHSKR--- 133
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + T + GT+ YL PE +
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDE 190
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 1 MIGGGAFGVVYRGS-LRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNI-RHPNLVQLIGC 58
++G G +G VY+G ++ G AIK + + +E EI+M+ H N+ G
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 59 CVE------DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHE 112
++ D+ LV E+ S+ + + +K + +W A IC GLS LH+
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI--AYICREILRGLSHLHQ 147
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALL 172
++HRDIK NVLL N K+ DFG++ V +T + GT ++APE
Sbjct: 148 HK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVIAC 203
Query: 173 GQLTK-----KADVYSFGVLLLEIISG 194
+ K+D++S G+ +E+ G
Sbjct: 204 DENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 110/204 (53%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQI----AIKCL-SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GAFG VY+G + +G ++ AIK L A S + KE L E ++ ++ +P++ +
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSK----SKYVSLDWPTRANICLGTASGLSFL 110
L+G C+ + L+ + + L + + K S+Y+ L+W C+ A G+++L
Sbjct: 89 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-LNW------CVQIAKGMNYL 140
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEY 169
D +VHRD+ A NVL+ H KI DFG AKL + + + + ++A E
Sbjct: 141 E---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 170 ALLGQLTKKADVYSFGVLLLEIIS 193
L T ++DV+S+GV + E+++
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCL--SAESKQGTKEFLTEIDMIWNIRHPNLVQLIG 57
++G G++G+V + +D G +AIK S + K K + EI ++ +RH NLV L+
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
C + LV+E++++ L + L LD+ +G+ F H
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPN----GLDYQVVQKYLFQIINGIGFCHSHN--- 144
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT- 176
I+HRDIK N+L+ + K+ DFG A+ VA T Y APE L+G +
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA-TRWYRAPE-LLVGDVKY 202
Query: 177 -KKADVYSFGVLLLEIISG 194
K DV++ G L+ E+ G
Sbjct: 203 GKAVDVWAIGCLVTEMFMG 221
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 13/200 (6%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQIAIKCLSAES--KQG-TKEFLTEIDMIWNIRHPNLVQLI 56
++G G+F VYR S+ G ++AIK + ++ K G + E+ + ++HP++++L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+ N LV E N + L K++ + +G+ +LH
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSENEARHFMHQIITGMLYLHSHG-- 132
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLA-KLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
I+HRD+ SN+LL N + KI DFGLA +L + H + + GT Y++PE A
Sbjct: 133 -ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEIATRSAH 189
Query: 176 TKKADVYSFGVLLLEIISGR 195
++DV+S G + ++ GR
Sbjct: 190 GLESDVWSLGCMFYTLLIGR 209
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAES--KQGTKEFLT-EIDMIWNIRHPNLVQLI 56
++G G+F VV L + AIK L K+ ++T E D++ + HP V+L
Sbjct: 16 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 75
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+D Y +N L + K S D S L +LH +
Sbjct: 76 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 129
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
I+HRD+K N+LL+ + H +I DFG AK L P++ + GT Y++PE
Sbjct: 130 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 188
Query: 176 TKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
K +D+++ G ++ ++++G +A G++ LI
Sbjct: 189 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIF 220
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 116/266 (43%), Gaps = 28/266 (10%)
Query: 2 IGGGAFGVVYRGSLRDGTQ--IAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G+FG V++G + + TQ +AIK + E++ ++ EI ++ P + + G
Sbjct: 30 IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 88
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
++D ++ EYL S + L LD A I GL +LH E
Sbjct: 89 YLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSEKK--- 140
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
+HRDIKA+NVLL + K+ DFG+A D + V GT ++APE K
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDSK 199
Query: 179 ADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFPEKEV 238
AD++S G+ +E+ G +L L+ EG K +
Sbjct: 200 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY------------SKPL 247
Query: 239 MRFIKVGLFCTQAGAHYRPTMKQVVE 264
F++ C +RPT K++++
Sbjct: 248 KEFVEA---CLNKEPSFRPTAKELLK 270
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 128
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + T + GT+ YL PE +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTXLCGTLDYLPPEMIEGRMHDE 185
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAES--KQGTKEFLT-EIDMIWNIRHPNLVQLI 56
++G G+F VV L + AIK L K+ ++T E D++ + HP V+L
Sbjct: 17 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 76
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+D Y +N L + K S D S L +LH +
Sbjct: 77 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 130
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
I+HRD+K N+LL+ + H +I DFG AK L P++ + GT Y++PE
Sbjct: 131 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 189
Query: 176 TKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
K +D+++ G ++ ++++G +A G++ LI
Sbjct: 190 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIF 221
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 128
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + T + GT+ YL PE +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTELCGTLDYLPPEMIEGRMHDE 185
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 129
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + T ++GT+ YL PE +
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR---RTTLSGTLDYLPPEMIEGRMHDE 186
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 14/214 (6%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAES--KQGTKEFLT-EIDMIWNIRHPNLVQLI 56
++G G+F VV L + AIK L K+ ++T E D++ + HP V+L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+D Y +N L + K S D S L +LH +
Sbjct: 99 FTFQDDEKLYFGLSYAKNGCLLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 152
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
I+HRD+K N+LL+ + H +I DFG AK L P++ + GT Y++PE
Sbjct: 153 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 211
Query: 176 TKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
+K +D+++ G ++ ++++G +A G++ LI
Sbjct: 212 SKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIF 243
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 75 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 127
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + T + GT+ YL PE +
Sbjct: 128 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDE 184
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 185 KVDLWSLGVLCYEFLVGKPPFEA 207
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAES--KQGTKEFLT-EIDMIWNIRHPNLVQLI 56
++G G+F VV L + AIK L K+ ++T E D++ + HP V+L
Sbjct: 14 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 73
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+D Y +N L + K S D S L +LH +
Sbjct: 74 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 127
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
I+HRD+K N+LL+ + H +I DFG AK L P++ + GT Y++PE
Sbjct: 128 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 186
Query: 176 TKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
K +D+++ G ++ ++++G +A G++ LI
Sbjct: 187 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIF 218
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAES--KQGTKEFLT-EIDMIWNIRHPNLVQLI 56
++G G+F VV L + AIK L K+ ++T E D++ + HP V+L
Sbjct: 15 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 74
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+D Y +N L + K S D S L +LH +
Sbjct: 75 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 128
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
I+HRD+K N+LL+ + H +I DFG AK L P++ + GT Y++PE
Sbjct: 129 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 187
Query: 176 TKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
K +D+++ G ++ ++++G +A G++ LI
Sbjct: 188 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIF 219
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 132
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + T + GT+ YL PE +
Sbjct: 133 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDE 189
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 190 KVDLWSLGVLCYEFLVGKPPFEA 212
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 131
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + T + GT+ YL PE +
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDE 188
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 28/266 (10%)
Query: 2 IGGGAFGVVYRGSLRDGTQ--IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGC 58
IG G+FG V++G + + TQ +AIK + E + E + EI ++ P + + G
Sbjct: 15 IGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 73
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
++D ++ EYL S + L LD A I GL +LH E
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSEKK--- 125
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
+HRDIKA+NVLL + K+ DFG+A D + V GT ++APE K
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDSK 184
Query: 179 ADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFPEKEV 238
AD++S G+ +E+ G +L L+ EG K +
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY------------SKPL 232
Query: 239 MRFIKVGLFCTQAGAHYRPTMKQVVE 264
F++ C +RPT K++++
Sbjct: 233 KEFVEA---CLNKEPSFRPTAKELLK 255
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 133
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + T + GT+ YL PE +
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDE 190
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 34/281 (12%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGT-KEFLTEIDMIWNIRHPNLVQLIGC 58
+IG GA VV + +AIK ++ E Q + E L EI + HPN+V
Sbjct: 17 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 76
Query: 59 CVEDNNRILVYEYLENNSLANAL--LGSKSKYVS--LDWPTRANICLGTASGLSFLHEEA 114
V + LV + L S+ + + + +K ++ S LD T A I GL +LH+
Sbjct: 77 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 136
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPD--NVTHVSTR--VAGTMGYLAPEYA 170
+HRD+KA N+LL + +I DFG++ ++T R GT ++APE
Sbjct: 137 Q---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE-- 191
Query: 171 LLGQLTK---KADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVD 227
++ Q+ KAD++SFG+ +E+ +G + +L+L L+ + LE
Sbjct: 192 VMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT-----LQNDPPSLE--- 243
Query: 228 PELTQFPEKEVMR-----FIKVGLFCTQAGAHYRPTMKQVV 263
T +KE+++ F K+ C Q RPT +++
Sbjct: 244 ---TGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 34/281 (12%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGT-KEFLTEIDMIWNIRHPNLVQLIGC 58
+IG GA VV + +AIK ++ E Q + E L EI + HPN+V
Sbjct: 22 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 81
Query: 59 CVEDNNRILVYEYLENNSLANAL--LGSKSKYVS--LDWPTRANICLGTASGLSFLHEEA 114
V + LV + L S+ + + + +K ++ S LD T A I GL +LH+
Sbjct: 82 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 141
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPD--NVTHVSTR--VAGTMGYLAPEYA 170
+HRD+KA N+LL + +I DFG++ ++T R GT ++APE
Sbjct: 142 Q---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE-- 196
Query: 171 LLGQLTK---KADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVD 227
++ Q+ KAD++SFG+ +E+ +G + +L+L L+ + LE
Sbjct: 197 VMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT-----LQNDPPSLE--- 248
Query: 228 PELTQFPEKEVMR-----FIKVGLFCTQAGAHYRPTMKQVV 263
T +KE+++ F K+ C Q RPT +++
Sbjct: 249 ---TGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 17/199 (8%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCC 59
IG G +GVVY+ G A+K L E + + EI ++ ++H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 60 VEDNNRILVYEYLENN--SLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+LV+E+L+ + L + G L+ T + L +G+++ H D
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGG------LESVTAKSFLLQLLNGIAYCH---DRR 120
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG--QL 175
++HRD+K N+L++ KI DFGLA+ F V + V T+ Y AP+ L+G +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPD-VLMGSKKY 178
Query: 176 TKKADVYSFGVLLLEIISG 194
+ D++S G + E+++G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 17/199 (8%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCC 59
IG G +GVVY+ G A+K L E + + EI ++ ++H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 60 VEDNNRILVYEYLENN--SLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+LV+E+L+ + L + G L+ T + L +G+++ H D
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGG------LESVTAKSFLLQLLNGIAYCH---DRR 120
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG--QL 175
++HRD+K N+L++ KI DFGLA+ F V + V T+ Y AP+ L+G +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPD-VLMGSKKY 178
Query: 176 TKKADVYSFGVLLLEIISG 194
+ D++S G + E+++G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 131
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + T + GT+ YL PE +
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDE 188
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 93 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 145
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + T + GT+ YL PE +
Sbjct: 146 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDE 202
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 203 KVDLWSLGVLCYEFLVGKPPFEA 225
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 154
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + T + GT+ YL PE +
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDE 211
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPFEA 234
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 133
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + T + GT+ YL PE +
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIEGRMHDE 190
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 128
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + T + GT+ YL PE +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIEGRMHDE 185
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY ++ I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKK--- 128
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA--GTMGYLAPEYALLGQL 175
++HRDIK N+LL KI DFG + P S R A GT+ YL PE
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRAALCGTLDYLPPEMIEGRMH 183
Query: 176 TKKADVYSFGVLLLEIISGRSSSKAAFGDD 205
+K D++S GVL E + G+ +A D
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQD 213
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 128
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + T + GT+ YL PE +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDE 185
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 2 IGGGAFGVVYRGSLRDGT----QIAIKCLSAE---SKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FGVV RG + +A+KCL + + +F+ E++ + ++ H NL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L G + + +V E SL + L + ++ T + + A G+ +L +
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL---GTLSRYAVQVAEGMGYLESKR 131
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTH--VSTRVAGTMGYLAPEYALL 172
+HRD+ A N+LL KIGDFGL + P N H + + APE
Sbjct: 132 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 173 GQLTKKADVYSFGVLLLEIIS 193
+ +D + FGV L E+ +
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 133
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + T + GT+ YL PE +
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRTTLCGTLDYLPPEXIEGRXHDE 190
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 129
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + T + GT+ YL PE +
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIEGRMHDE 186
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 2 IGGGAFGVVYRGSLRDGT----QIAIKCLSAE---SKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FGVV RG + +A+KCL + + +F+ E++ + ++ H NL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L G + + +V E SL + L + ++ T + + A G+ +L +
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL---GTLSRYAVQVAEGMGYLESKR 141
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTH--VSTRVAGTMGYLAPEYALL 172
+HRD+ A N+LL KIGDFGL + P N H + + APE
Sbjct: 142 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 173 GQLTKKADVYSFGVLLLEIIS 193
+ +D + FGV L E+ +
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT 219
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAES--KQGTKEFLT-EIDMIWNIRHPNLVQLI 56
++G G+F VV L + AIK L K+ ++T E D++ + HP V+L
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+D Y +N L + K S D S L +LH +
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 150
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
I+HRD+K N+LL+ + H +I DFG AK L P++ + GT Y++PE
Sbjct: 151 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 176 TKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
K +D+++ G ++ ++++G +A G++ LI
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIF 241
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 128
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + T + GT+ YL PE +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPPEMIEGRMHDE 185
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 2 IGGGAFGVVYRGSLRDGT----QIAIKCLSAE---SKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FGVV RG + +A+KCL + + +F+ E++ + ++ H NL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L G + + +V E SL + L + ++ T + + A G+ +L +
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL---GTLSRYAVQVAEGMGYLESKR 135
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTH--VSTRVAGTMGYLAPEYALL 172
+HRD+ A N+LL KIGDFGL + P N H + + APE
Sbjct: 136 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 173 GQLTKKADVYSFGVLLLEIIS 193
+ +D + FGV L E+ +
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT 213
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAES--KQGTKEFLT-EIDMIWNIRHPNLVQLI 56
++G G+F VV L + AIK L K+ ++T E D++ + HP V+L
Sbjct: 21 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 80
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+D Y +N L + K S D S L +LH +
Sbjct: 81 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 134
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
I+HRD+K N+LL+ + H +I DFG AK L P++ + GT Y++PE
Sbjct: 135 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 193
Query: 176 TKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
K +D+++ G ++ ++++G +A G++ LI
Sbjct: 194 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIF 225
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 2 IGGGAFGVVYRGSLRDGT----QIAIKCLSAE---SKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FGVV RG + +A+KCL + + +F+ E++ + ++ H NL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L G + + +V E SL + L + ++ T + + A G+ +L +
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL---GTLSRYAVQVAEGMGYLESKR 131
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTH--VSTRVAGTMGYLAPEYALL 172
+HRD+ A N+LL KIGDFGL + P N H + + APE
Sbjct: 132 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 173 GQLTKKADVYSFGVLLLEIIS 193
+ +D + FGV L E+ +
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 2 IGGGAFGVVYRGSLRDGT----QIAIKCLSAE---SKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FGVV RG + +A+KCL + + +F+ E++ + ++ H NL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L G + + +V E SL + L + ++ T + + A G+ +L +
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL---GTLSRYAVQVAEGMGYLESKR 141
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTH--VSTRVAGTMGYLAPEYALL 172
+HRD+ A N+LL KIGDFGL + P N H + + APE
Sbjct: 142 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 173 GQLTKKADVYSFGVLLLEIIS 193
+ +D + FGV L E+ +
Sbjct: 199 RTFSHASDTWMFGVTLWEMFT 219
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAES--KQGTKEFLT-EIDMIWNIRHPNLVQLI 56
++G G+F VV L + AIK L K+ ++T E D++ + HP V+L
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+D Y +N L + K S D S L +LH +
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 150
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
I+HRD+K N+LL+ + H +I DFG AK L P++ + GT Y++PE
Sbjct: 151 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 176 TKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
K +D+++ G ++ ++++G +A G++ LI
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIF 241
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 2 IGGGAFGVVYRGSLRDGT----QIAIKCLSAE---SKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FGVV RG + +A+KCL + + +F+ E++ + ++ H NL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L G + + +V E SL + L + ++ T + + A G+ +L +
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL---GTLSRYAVQVAEGMGYLESKR 135
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTH--VSTRVAGTMGYLAPEYALL 172
+HRD+ A N+LL KIGDFGL + P N H + + APE
Sbjct: 136 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 173 GQLTKKADVYSFGVLLLEIIS 193
+ +D + FGV L E+ +
Sbjct: 193 RTFSHASDTWMFGVTLWEMFT 213
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 33/212 (15%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+G G +G V+RGS + G +A+K S+ + K +E TE+ +RH N++ I +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 72
Query: 61 EDNNR----ILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE--- 113
+ L+ Y E SL + L + +LD + I L ASGL+ LH E
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 114 --ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVST----RVAGTMGYLAP 167
P I HRD+K+ N+L+ N I D GLA + + + RV GT Y+AP
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAP 186
Query: 168 EYALLGQLT--------KKADVYSFGVLLLEI 191
E +L + K+ D+++FG++L E+
Sbjct: 187 E--VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAES--KQGTKEFLT-EIDMIWNIRHPNLVQLI 56
++G G+F VV L + AIK L K+ ++T E D++ + HP V+L
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 99
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+D Y +N L + K S D S L +LH +
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 153
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
I+HRD+K N+LL+ + H +I DFG AK L P++ + GT Y++PE
Sbjct: 154 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 212
Query: 176 TKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
K +D+++ G ++ ++++G +A G++ LI
Sbjct: 213 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIF 244
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 33/212 (15%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+G G +G V+RGS + G +A+K S+ + K +E TE+ +RH N++ I +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 72
Query: 61 EDNNR----ILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE--- 113
+ L+ Y E SL + L + +LD + I L ASGL+ LH E
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 114 --ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVST----RVAGTMGYLAP 167
P I HRD+K+ N+L+ N I D GLA + + + RV GT Y+AP
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAP 186
Query: 168 EYALLGQLT--------KKADVYSFGVLLLEI 191
E +L + K+ D+++FG++L E+
Sbjct: 187 E--VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 2 IGGGAFGVVYRGSLRDGT----QIAIKCLSAE---SKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FGVV RG + +A+KCL + + +F+ E++ + ++ H NL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L G + + +V E SL + L + ++ T + + A G+ +L +
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLL---GTLSRYAVQVAEGMGYLESKR 131
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTH--VSTRVAGTMGYLAPEYALL 172
+HRD+ A N+LL KIGDFGL + P N H + + APE
Sbjct: 132 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 173 GQLTKKADVYSFGVLLLEIIS 193
+ +D + FGV L E+ +
Sbjct: 189 RTFSHASDTWMFGVTLWEMFT 209
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAES--KQGTKEFLT-EIDMIWNIRHPNLVQLI 56
++G G+F VV L + AIK L K+ ++T E D++ + HP V+L
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 99
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+D Y +N L + K S D S L +LH +
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 153
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
I+HRD+K N+LL+ + H +I DFG AK L P++ + GT Y++PE
Sbjct: 154 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 212
Query: 176 TKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
K +D+++ G ++ ++++G +A G++ LI
Sbjct: 213 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIF 244
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAES--KQGTKEFLT-EIDMIWNIRHPNLVQLI 56
++G G+F VV L + AIK L K+ ++T E D++ + HP V+L
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 95
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+D Y +N L + K S D S L +LH +
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 149
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
I+HRD+K N+LL+ + H +I DFG AK L P++ + GT Y++PE
Sbjct: 150 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 208
Query: 176 TKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
K +D+++ G ++ ++++G +A G++ LI
Sbjct: 209 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIF 240
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAES--KQGTKEFLT-EIDMIWNIRHPNLVQLI 56
++G G+F VV L + AIK L K+ ++T E D++ + HP V+L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+D Y +N L + K S D S L +LH +
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 152
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
I+HRD+K N+LL+ + H +I DFG AK L P++ + GT Y++PE
Sbjct: 153 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 176 TKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
K +D+++ G ++ ++++G +A G++ LI
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIF 243
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAES--KQGTKEFLT-EIDMIWNIRHPNLVQLI 56
++G G+F VV L + AIK L K+ ++T E D++ + HP V+L
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 95
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+D Y +N L + K S D S L +LH +
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 149
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
I+HRD+K N+LL+ + H +I DFG AK L P++ + GT Y++PE
Sbjct: 150 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 208
Query: 176 TKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
K +D+++ G ++ ++++G +A G++ LI
Sbjct: 209 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIF 240
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAES--KQGTKEFLT-EIDMIWNIRHPNLVQLI 56
++G G+F VV L + AIK L K+ ++T E D++ + HP V+L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+D Y +N L + K S D S L +LH +
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 152
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
I+HRD+K N+LL+ + H +I DFG AK L P++ + GT Y++PE
Sbjct: 153 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 176 TKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
K +D+++ G ++ ++++G +A G++ LI
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIF 243
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 73 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 125
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + T + GT+ YL PE +
Sbjct: 126 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDE 182
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 183 KVDLWSLGVLCYEFLVGKPPFEA 205
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAES--KQGTKEFLT-EIDMIWNIRHPNLVQLI 56
++G G+F VV L + AIK L K+ ++T E D++ + HP V+L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+D Y +N L + K S D S L +LH +
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 152
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
I+HRD+K N+LL+ + H +I DFG AK L P++ + GT Y++PE
Sbjct: 153 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 176 TKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
K +D+++ G ++ ++++G +A G++ LI
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIF 243
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAES--KQGTKEFLT-EIDMIWNIRHPNLVQLI 56
++G G+F VV L + AIK L K+ ++T E D++ + HP V+L
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+D Y +N L + K S D S L +LH +
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 150
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
I+HRD+K N+LL+ + H +I DFG AK L P++ + GT Y++PE
Sbjct: 151 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSA 209
Query: 176 TKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
K +D+++ G ++ ++++G +A G++ LI
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIF 241
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAES---KQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G GAF V+ R +AIKC++ E+ K+G+ E EI ++ I+HPN+V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME--NEIAVLHKIKHPNIVALD 82
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+ L+ + + L + ++ K Y D + + + +LH D
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIV-EKGFYTERD---ASRLIFQVLDAVKYLH---DL 135
Query: 117 PIVHRDIKASNVL---LDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG 173
IVHRD+K N+L LD + I DFGL+K+ ++ V + GT GY+APE
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 174 QLTKKADVYSFGVLLLEIISG 194
+K D +S GV+ ++ G
Sbjct: 194 PYSKAVDCWSIGVIAYILLCG 214
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 99/199 (49%), Gaps = 17/199 (8%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCC 59
IG G +GVVY+ G A+K L E + + EI ++ ++H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 60 VEDNNRILVYEYLENN--SLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+LV+E+L+ + L + G L+ T + L +G+++ H D
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGG------LESVTAKSFLLQLLNGIAYCH---DRR 120
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG--QL 175
++HRD+K N+L++ KI DFGLA+ F V + + T+ Y AP+ L+G +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPD-VLMGSKKY 178
Query: 176 TKKADVYSFGVLLLEIISG 194
+ D++S G + E+++G
Sbjct: 179 STTIDIWSVGCIFAEMVNG 197
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAES---KQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G GAF V+ R +AIKC++ E+ K+G+ E EI ++ I+HPN+V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME--NEIAVLHKIKHPNIVALD 82
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+ L+ + + L + ++ K Y D + + + +LH D
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIV-EKGFYTERD---ASRLIFQVLDAVKYLH---DL 135
Query: 117 PIVHRDIKASNVL---LDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG 173
IVHRD+K N+L LD + I DFGL+K+ ++ V + GT GY+APE
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 174 QLTKKADVYSFGVLLLEIISG 194
+K D +S GV+ ++ G
Sbjct: 194 PYSKAVDCWSIGVIAYILLCG 214
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAES--KQGTKEFLT-EIDMIWNIRHPNLVQLI 56
++G G+F VV L + AIK L K+ ++T E D++ + HP V+L
Sbjct: 42 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 101
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+D Y +N L + K S D S L +LH +
Sbjct: 102 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 155
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
I+HRD+K N+LL+ + H +I DFG AK L P++ + GT Y++PE
Sbjct: 156 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 214
Query: 176 TKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
K +D+++ G ++ ++++G +A G++ LI
Sbjct: 215 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIF 246
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 33/212 (15%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+G G +G V+RGS + G +A+K S+ + K +E TE+ +RH N++ I +
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 101
Query: 61 EDNNR----ILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE--- 113
+ L+ Y E SL + L + +LD + I L ASGL+ LH E
Sbjct: 102 TSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHIEIFG 156
Query: 114 --ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVST----RVAGTMGYLAP 167
P I HRD+K+ N+L+ N I D GLA + + + RV GT Y+AP
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAP 215
Query: 168 EYALLGQLT--------KKADVYSFGVLLLEI 191
E +L + K+ D+++FG++L E+
Sbjct: 216 E--VLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAES---KQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G GAF V+ R +AIKC++ E+ K+G+ E EI ++ I+HPN+V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME--NEIAVLHKIKHPNIVALD 82
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+ L+ + + L + ++ K Y D + + + +LH D
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIV-EKGFYTERD---ASRLIFQVLDAVKYLH---DL 135
Query: 117 PIVHRDIKASNVL---LDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG 173
IVHRD+K N+L LD + I DFGL+K+ ++ V + GT GY+APE
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 174 QLTKKADVYSFGVLLLEIISG 194
+K D +S GV+ ++ G
Sbjct: 194 PYSKAVDCWSIGVIAYILLCG 214
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 108/218 (49%), Gaps = 17/218 (7%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLS---AESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G G+FG V+ G + A+K +S + K + L E+ ++ + HPN+++L
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+ LV E L + ++ S+ ++ +D A I SG++++H+
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVD---AARIIRQVLSGITYMHKNK-- 152
Query: 117 PIVHRDIKASNVLLDG---NFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG 173
IVHRD+K N+LL+ + + +I DFGL+ F + GT Y+APE L G
Sbjct: 153 -IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAPE-VLHG 208
Query: 174 QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVE 211
+K DV+S GV+L ++SG A D+L VE
Sbjct: 209 TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVE 246
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 132/302 (43%), Gaps = 44/302 (14%)
Query: 2 IGGGAFGVVYRGSL-----RDGT-QIAIKCLSAESKQGTKE-FLTEIDMIWNI-RHPNLV 53
+G GAFG V + D ++A+K L + + KE ++E+ ++ ++ +H N+V
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 54 QLIGCCVEDNNRILVYEYLENNSLAN-------ALLG------------SKSKYVSLDWP 94
L+G C +++ EY L N A+LG K L+
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 95 TRANICLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTH 153
+ A G++FL A +HRD+ A NVLL KIGDFGLA+ + D+
Sbjct: 159 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 215
Query: 154 VSTRVAGTMGYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWT 213
V + ++APE T ++DV+S+G+LL EI S + +++
Sbjct: 216 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG-----ILVNSKF 270
Query: 214 WKLREEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLN 273
+KL ++G ++ P F K + ++ C +RPT +Q+ L + +
Sbjct: 271 YKLVKDG--YQMAQPA---FAPKNIYSIMQA---CWALEPTHRPTFQQICSFLQEQAQED 322
Query: 274 EK 275
+
Sbjct: 323 RR 324
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY + L K D A A+ LS+ H +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKEL----QKLSKFDEQRTATYITELANALSYCHSKR--- 133
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + + GT+ YL PE +
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRXXLXGTLDYLPPEMIEGRMHDE 190
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 14/216 (6%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAES--KQGTKEFLT-EIDMIWNIRHPNLVQLI 56
++G G+F VV L + AIK L K+ ++T E D++ + HP V+L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+D Y +N L + K S D S L +LH +
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 152
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
I+HRD+K N+LL+ + H +I DFG AK L P++ + GT Y++PE
Sbjct: 153 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 176 TKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVE 211
K +D+++ G ++ ++++G +A G++ LI +
Sbjct: 212 XKSSDLWALGCIIYQLVAGLPPFRA--GNEGLIFAK 245
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 14/216 (6%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAES--KQGTKEFLT-EIDMIWNIRHPNLVQLI 56
++G G+F VV L + AIK L K+ ++T E D++ + HP V+L
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+D Y +N L + K S D S L +LH +
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 152
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
I+HRD+K N+LL+ + H +I DFG AK L P++ + GT Y++PE
Sbjct: 153 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 176 TKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVE 211
K +D+++ G ++ ++++G +A G++ LI +
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRA--GNEGLIFAK 245
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 128
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA--GTMGYLAPEYALLGQL 175
++HRDIK N+LL KI DFG + P S R A GT+ YL PE
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRAALCGTLDYLPPEMIEGRMH 183
Query: 176 TKKADVYSFGVLLLEIISGRSSSKA 200
+K D++S GVL E + G+ +A
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSA---ESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G GAF V+ R +AIKC++ E K+G+ E EI ++ I+HPN+V L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSME--NEIAVLHKIKHPNIVALD 82
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+ L+ + + L + ++ K Y D + + + +LH D
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIV-EKGFYTERD---ASRLIFQVLDAVKYLH---DL 135
Query: 117 PIVHRDIKASNVL---LDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG 173
IVHRD+K N+L LD + I DFGL+K+ ++ V + GT GY+APE
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 174 QLTKKADVYSFGVLLLEIISG 194
+K D +S GV+ ++ G
Sbjct: 194 PYSKAVDCWSIGVIAYILLCG 214
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 131
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + + GT+ YL PE +
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRXXLCGTLDYLPPEMIEGRMHDE 188
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 14/214 (6%)
Query: 1 MIGGGAFGV-VYRGSLRDGTQIAIKCLSAES--KQGTKEFLT-EIDMIWNIRHPNLVQLI 56
++G G+F V L + AIK L K+ ++T E D++ + HP V+L
Sbjct: 37 ILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+D Y +N L + K S D S L +LH +
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGKG-- 150
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
I+HRD+K N+LL+ + H +I DFG AK L P++ + GT Y++PE
Sbjct: 151 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 176 TKKADVYSFGVLLLEIISGRSSSKAAFGDDMLIL 209
K +D+++ G ++ ++++G +A G++ LI
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIF 241
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 131
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI +FG + P + T + GT+ YL PE +
Sbjct: 132 VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDE 188
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAE---SKQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G G FG V+ G A+K L E +K LTE ++ N RHP L L
Sbjct: 158 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 217
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC-LGTASGLSFLHEEAD 115
+ V EY L L S+ + S D RA S L +LH E +
Sbjct: 218 YSFQTHDRLCFVMEYANGGELFFHL--SRERVFSED---RARFYGAEIVSALDYLHSEKN 272
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+V+RD+K N++LD + H KI DFGL K + + T GT YLAPE
Sbjct: 273 --VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEVLEDNDY 329
Query: 176 TKKADVYSFGVLLLEIISGR 195
+ D + GV++ E++ GR
Sbjct: 330 GRAVDWWGLGVVMYEMMCGR 349
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 90/200 (45%), Gaps = 13/200 (6%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAE---SKQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G G FG V+ G A+K L E +K LTE ++ N RHP L L
Sbjct: 155 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 214
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC-LGTASGLSFLHEEAD 115
+ V EY L L S+ + S D RA S L +LH E +
Sbjct: 215 YSFQTHDRLCFVMEYANGGELFFHL--SRERVFSED---RARFYGAEIVSALDYLHSEKN 269
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+V+RD+K N++LD + H KI DFGL K + + T GT YLAPE
Sbjct: 270 --VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEVLEDNDY 326
Query: 176 TKKADVYSFGVLLLEIISGR 195
+ D + GV++ E++ GR
Sbjct: 327 GRAVDWWGLGVVMYEMMCGR 346
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 128
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + + GT+ YL PE +
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRXXLCGTLDYLPPEMIEGRMHDE 185
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 33/229 (14%)
Query: 5 GAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVEDNN 64
G FG V++ L + +A+K + KQ + EI ++H NL+Q I +N
Sbjct: 26 GRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRGSN 83
Query: 65 R----ILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA------ 114
L+ + + SL + L G+ + W ++ + GLS+LHE+
Sbjct: 84 LEVELWLITAFHDKGSLTDYLKGN-----IITWNELCHVAETMSRGLSYLHEDVPWCRGE 138
Query: 115 --DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF----PDNVTHVSTRVAGTMGYLAPE 168
P I HRD K+ NVLL + + DFGLA F P TH GT Y+APE
Sbjct: 139 GHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV---GTRRYMAPE 195
Query: 169 YALLGQLT------KKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVE 211
L G + + D+Y+ G++L E++S ++ + ML E
Sbjct: 196 -VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEE 243
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 129
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + + GT+ YL PE +
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT---LCGTLDYLPPEMIEGRMHDE 186
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 130
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + + GT+ YL PE +
Sbjct: 131 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRXXLCGTLDYLPPEMIEGRMHDE 187
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPFEA 210
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 130
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI +FG + P + T + GT+ YL PE +
Sbjct: 131 VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGTLDYLPPEMIEGRMHDE 187
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPFEA 210
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 20/226 (8%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLS---AESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G G+FG V+ G + A+K +S + K + L E+ ++ + HPN+++L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+ LV E L + ++ S+ ++ +D A I SG++++H+
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVD---AARIIRQVLSGITYMHKN--- 145
Query: 117 PIVHRDIKASNVLLDG---NFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG 173
IVHRD+K N+LL+ + + +I DFGL+ F + GT Y+APE L G
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAPE-VLHG 202
Query: 174 QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVE---WTWKL 216
+K DV+S GV+L ++SG A D+L VE +T++L
Sbjct: 203 TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFEL 248
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 20/226 (8%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLS---AESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G G+FG V+ G + A+K +S + K + L E+ ++ + HPN+++L
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+ LV E L + ++ S+ ++ +D A I SG++++H+
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVD---AARIIRQVLSGITYMHKN--- 168
Query: 117 PIVHRDIKASNVLLDG---NFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG 173
IVHRD+K N+LL+ + + +I DFGL+ F + GT Y+APE L G
Sbjct: 169 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAPE-VLHG 225
Query: 174 QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVE---WTWKL 216
+K DV+S GV+L ++SG A D+L VE +T++L
Sbjct: 226 TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFEL 271
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 20/226 (8%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLS---AESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G G+FG V+ G + A+K +S + K + L E+ ++ + HPN+++L
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+ LV E L + ++ S+ ++ +D A I SG++++H+
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVD---AARIIRQVLSGITYMHKN--- 169
Query: 117 PIVHRDIKASNVLLDG---NFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG 173
IVHRD+K N+LL+ + + +I DFGL+ F + GT Y+APE L G
Sbjct: 170 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAPE-VLHG 226
Query: 174 QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVE---WTWKL 216
+K DV+S GV+L ++SG A D+L VE +T++L
Sbjct: 227 TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFEL 272
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 131
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA--GTMGYLAPEYALLGQL 175
++HRDIK N+LL KI DFG + P S R A GT+ YL PE
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRAALCGTLDYLPPEMIEGRMH 186
Query: 176 TKKADVYSFGVLLLEIISGRSSSKA 200
+K D++S GVL E + G+ +A
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 17/200 (8%)
Query: 1 MIGGGAFGVVYRGSLRDGTQI-AIKCLS----AESKQG-TKEFLTEIDMIWNIRHPNLVQ 54
+G G F VY+ ++ QI AIK + +E+K G + L EI ++ + HPN++
Sbjct: 17 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRAN-ICLGTASGLSFLHEE 113
L+ +N LV++++E + ++ S ++ P+ L T GL +LH+
Sbjct: 77 LLDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLT---PSHIKAYMLMTLQGLEYLHQH 131
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG 173
I+HRD+K +N+LLD N K+ DFGLAK F +V T Y APE
Sbjct: 132 W---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYRAPELLFGA 187
Query: 174 QLTK-KADVYSFGVLLLEII 192
++ D+++ G +L E++
Sbjct: 188 RMYGVGVDMWAVGCILAELL 207
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 1 MIGGGAFGVVY---RGSLRDGTQI-AIKCLSAESKQGTKEFLT--EIDMIWNIRHPNLVQ 54
++G G+FG V+ + S D Q+ A+K L + + T E D++ + HP +V+
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + L+ ++L L L SK V A L LH
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEEDVKFYLAELALALDHLHSLG 146
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTH--VSTRVAGTMGYLAPEYALL 172
I++RD+K N+LLD H K+ DFGL+K +++ H + GT+ Y+APE
Sbjct: 147 ---IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 173 GQLTKKADVYSFGVLLLEIISG 194
T+ AD +SFGVL+ E+++G
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTG 222
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 24/222 (10%)
Query: 2 IGGGAFGVVYRGSLR-----DGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V +G + + I A E L E +++ + +P +V++I
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR----ANICLGTASGLSFLHE 112
G C E + +LV E E LG +KY+ + + + + G+ +L E
Sbjct: 93 GIC-EAESWMLVMEMAE--------LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 143
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF--PDNVTHVSTRVAGTMGYLAPEYA 170
VHRD+ A NVLL + KI DFGL+K +N T + + APE
Sbjct: 144 SN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 200
Query: 171 LLGQLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVE 211
+ + K+DV+SFGVL+ E S G+ + G ++ ++E
Sbjct: 201 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 242
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 131
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + + GT+ YL PE +
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRDDLCGTLDYLPPEMIEGRMHDE 188
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 27/208 (12%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQLIGCC 59
IG GA+G+V + ++AIK +S E + + L EI ++ RH N++
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG----- 105
Query: 60 VEDNNRILVYEYLENNSLANALLGS------KSKYVSLDWPTRANICL---GTASGLSFL 110
+ D R E +++ L L+G+ K++++S D +IC GL ++
Sbjct: 106 INDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSND-----HICYFLYQILRGLKYI 160
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPE 168
H ++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 161 HSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 169 YALLGQ-LTKKADVYSFGVLLLEIISGR 195
L + TK D++S G +L E++S R
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 1 MIGGGAFGVVYRGSLR----DGTQIAIKCLSAESKQGTKE-FLTEIDMIWNIRHPNLVQL 55
++G G FG VY G + +A+K + KE F++E ++ N+ HP++V+L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
IG +E+ ++ E L + L +K+ SL T L +++L
Sbjct: 75 IGI-IEEEPTWIIMELYPYGELGHYLERNKN---SLKVLTLVLYSLQICKAMAYLESIN- 129
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
VHRDI N+L+ K+GDFGL++ D + ++ + +++PE +
Sbjct: 130 --CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 187
Query: 176 TKKADVYSFGVLLLEIIS 193
T +DV+ F V + EI+S
Sbjct: 188 TTASDVWMFAVCMWEILS 205
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 24/222 (10%)
Query: 2 IGGGAFGVVYRGSLR-----DGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V +G + + I A E L E +++ + +P +V++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR----ANICLGTASGLSFLHE 112
G C E + +LV E E LG +KY+ + + + + G+ +L E
Sbjct: 95 GIC-EAESWMLVMEMAE--------LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 145
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF--PDNVTHVSTRVAGTMGYLAPEYA 170
VHRD+ A NVLL + KI DFGL+K +N T + + APE
Sbjct: 146 SN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 202
Query: 171 LLGQLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVE 211
+ + K+DV+SFGVL+ E S G+ + G ++ ++E
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 24/222 (10%)
Query: 2 IGGGAFGVVYRGSLR-----DGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V +G + + I A E L E +++ + +P +V++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR----ANICLGTASGLSFLHE 112
G C E + +LV E E LG +KY+ + + + + G+ +L E
Sbjct: 95 GIC-EAESWMLVMEMAE--------LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 145
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF--PDNVTHVSTRVAGTMGYLAPEYA 170
VHRD+ A NVLL + KI DFGL+K +N T + + APE
Sbjct: 146 SN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 202
Query: 171 LLGQLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVE 211
+ + K+DV+SFGVL+ E S G+ + G ++ ++E
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 135/290 (46%), Gaps = 43/290 (14%)
Query: 2 IGGGAFGVVY----RGSLRDG--TQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FG+VY +G ++D T++AIK ++ A S + EFL E ++ ++V+
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVS---LDWPTRANICLGT---ASGLS 108
L+G + +++ E + L + L + + + L P+ + + A G++
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 109 FLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG----- 163
+L+ VHRD+ A N ++ +F KIGDFG+ + ++ G G
Sbjct: 138 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVR 190
Query: 164 YLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLL 223
+++PE G T +DV+SFGV+L EI + ++ ++ + EG LL
Sbjct: 191 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL------RFVMEGGLL 244
Query: 224 EIVD--PELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
+ D P++ E+MR C Q RP+ +++ + +++
Sbjct: 245 DKPDNCPDMLL----ELMR------MCWQYNPKMRPSFLEIISSIKEEME 284
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L + K G + L E+++ ++RHPN+++L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY ++ L K D A A+ LS+ H +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 154
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + + GT+ YL PE +
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RRDDLCGTLDYLPPEMIEGRMHDE 211
Query: 178 KADVYSFGVLLLEIISGRSSSKA 200
K D++S GVL E + G+ +A
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPFEA 234
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 24/222 (10%)
Query: 2 IGGGAFGVVYRGSLR-----DGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V +G + + I A E L E +++ + +P +V++I
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR----ANICLGTASGLSFLHE 112
G C E + +LV E E LG +KY+ + + + + G+ +L E
Sbjct: 437 GIC-EAESWMLVMEMAE--------LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 487
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYA 170
VHRD+ A NVLL + KI DFGL+K + + + G + + APE
Sbjct: 488 SN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 544
Query: 171 LLGQLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVE 211
+ + K+DV+SFGVL+ E S G+ + G ++ ++E
Sbjct: 545 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 586
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 1 MIGGGAFGVVY---RGSLRDGTQI-AIKCLSAESKQGTKEFLT--EIDMIWNIRHPNLVQ 54
++G G+FG V+ + S D Q+ A+K L + + T E D++ + HP +V+
Sbjct: 32 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 91
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + L+ ++L L L SK V A L LH
Sbjct: 92 LHYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEEDVKFYLAELALALDHLHSLG 147
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
I++RD+K N+LLD H K+ DFGL+K D+ + GT+ Y+APE
Sbjct: 148 ---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMAPEVVNRRG 203
Query: 175 LTKKADVYSFGVLLLEIISG 194
T+ AD +SFGVL+ E+++G
Sbjct: 204 HTQSADWWSFGVLMFEMLTG 223
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 1 MIGGGAFGVVYRGSLR----DGTQIAIKCLSAESKQGTKE-FLTEIDMIWNIRHPNLVQL 55
++G G FG VY G + +A+K + KE F++E ++ N+ HP++V+L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
IG +E+ ++ E L + L +K+ SL T L +++L
Sbjct: 79 IGI-IEEEPTWIIMELYPYGELGHYLERNKN---SLKVLTLVLYSLQICKAMAYLESIN- 133
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
VHRDI N+L+ K+GDFGL++ D + ++ + +++PE +
Sbjct: 134 --CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 191
Query: 176 TKKADVYSFGVLLLEIIS 193
T +DV+ F V + EI+S
Sbjct: 192 TTASDVWMFAVCMWEILS 209
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 24/222 (10%)
Query: 2 IGGGAFGVVYRGSLR-----DGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V +G + + I A E L E +++ + +P +V++I
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR----ANICLGTASGLSFLHE 112
G C E + +LV E E LG +KY+ + + + + G+ +L E
Sbjct: 438 GIC-EAESWMLVMEMAE--------LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 488
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYA 170
VHRD+ A NVLL + KI DFGL+K + + + G + + APE
Sbjct: 489 SN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 545
Query: 171 LLGQLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVE 211
+ + K+DV+SFGVL+ E S G+ + G ++ ++E
Sbjct: 546 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 587
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 1 MIGGGAFGVVYRGSLR----DGTQIAIKCLSAESKQGTKE-FLTEIDMIWNIRHPNLVQL 55
++G G FG VY G + +A+K + KE F++E ++ N+ HP++V+L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
IG +E+ ++ E L + L +K+ SL T L +++L
Sbjct: 91 IGI-IEEEPTWIIMELYPYGELGHYLERNKN---SLKVLTLVLYSLQICKAMAYLESIN- 145
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
VHRDI N+L+ K+GDFGL++ D + ++ + +++PE +
Sbjct: 146 --CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 203
Query: 176 TKKADVYSFGVLLLEIIS 193
T +DV+ F V + EI+S
Sbjct: 204 TTASDVWMFAVCMWEILS 221
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 1 MIGGGAFGVVY---RGSLRDGTQI-AIKCLSAESKQGTKEFLTEI--DMIWNIRHPNLVQ 54
++G G+FG V+ + S D Q+ A+K L + + T++ D++ + HP +V+
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + L+ ++L L L SK V A L LH
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEEDVKFYLAELALALDHLHSLG 146
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
I++RD+K N+LLD H K+ DFGL+K D+ + GT+ Y+APE
Sbjct: 147 ---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMAPEVVNRRG 202
Query: 175 LTKKADVYSFGVLLLEIISG 194
T+ AD +SFGVL+ E+++G
Sbjct: 203 HTQSADWWSFGVLMFEMLTG 222
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 24/222 (10%)
Query: 2 IGGGAFGVVYRGSLR-----DGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V +G + + I A E L E +++ + +P +V++I
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR----ANICLGTASGLSFLHE 112
G C E + +LV E E LG +KY+ + + + + G+ +L E
Sbjct: 85 GIC-EAESWMLVMEMAE--------LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 135
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYA 170
VHRD+ A NVLL + KI DFGL+K + + + G + + APE
Sbjct: 136 SN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 192
Query: 171 LLGQLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVE 211
+ + K+DV+SFGVL+ E S G+ + G ++ ++E
Sbjct: 193 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 234
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 24/222 (10%)
Query: 2 IGGGAFGVVYRGSLR-----DGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V +G + + I A E L E +++ + +P +V++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR----ANICLGTASGLSFLHE 112
G C E + +LV E E LG +KY+ + + + + G+ +L E
Sbjct: 79 GIC-EAESWMLVMEMAE--------LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 129
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF--PDNVTHVSTRVAGTMGYLAPEYA 170
VHRD+ A NVLL + KI DFGL+K +N T + + APE
Sbjct: 130 SN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECI 186
Query: 171 LLGQLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVE 211
+ + K+DV+SFGVL+ E S G+ + G ++ ++E
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 228
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 24/222 (10%)
Query: 2 IGGGAFGVVYRGSLR-----DGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V +G + + I A E L E +++ + +P +V++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR----ANICLGTASGLSFLHE 112
G C E + +LV E E LG +KY+ + + + + G+ +L E
Sbjct: 79 GIC-EAESWMLVMEMAE--------LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 129
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF--PDNVTHVSTRVAGTMGYLAPEYA 170
VHRD+ A NVLL + KI DFGL+K +N T + + APE
Sbjct: 130 SN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 186
Query: 171 LLGQLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVE 211
+ + K+DV+SFGVL+ E S G+ + G ++ ++E
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 228
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 135/286 (47%), Gaps = 35/286 (12%)
Query: 2 IGGGAFGVVY----RGSLRDG--TQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FG+VY +G ++D T++AIK ++ A S + EFL E ++ ++V+
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVS---LDWPTRANICLGT---ASGLS 108
L+G + +++ E + L + L + + L P+ + + A G++
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 109 FLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAP 167
+L+ VHRD+ A N ++ +F KIGDFG+ + ++ + + + +++P
Sbjct: 153 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 168 EYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVD 227
E G T +DV+SFGV+L EI + ++ ++ + EG LL+ D
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL------RFVMEGGLLDKPD 263
Query: 228 --PELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
P++ E+MR C Q RP+ +++ + +++
Sbjct: 264 NCPDML----FELMR------MCWQYNPKMRPSFLEIISSIKEEME 299
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 24/222 (10%)
Query: 2 IGGGAFGVVYRGSLR-----DGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V +G + + I A E L E +++ + +P +V++I
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR----ANICLGTASGLSFLHE 112
G C E + +LV E E LG +KY+ + + + + G+ +L E
Sbjct: 75 GIC-EAESWMLVMEMAE--------LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 125
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYA 170
VHRD+ A NVLL + KI DFGL+K + + + G + + APE
Sbjct: 126 SN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 182
Query: 171 LLGQLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVE 211
+ + K+DV+SFGVL+ E S G+ + G ++ ++E
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 224
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 135/286 (47%), Gaps = 35/286 (12%)
Query: 2 IGGGAFGVVY----RGSLRDG--TQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FG+VY +G ++D T++AIK ++ A S + EFL E ++ ++V+
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVS---LDWPTRANICLGT---ASGLS 108
L+G + +++ E + L + L + + L P+ + + A G++
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 109 FLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAP 167
+L+ VHRD+ A N ++ +F KIGDFG+ + ++ + + + +++P
Sbjct: 143 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 199
Query: 168 EYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVD 227
E G T +DV+SFGV+L EI + ++ ++ + EG LL+ D
Sbjct: 200 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL------RFVMEGGLLDKPD 253
Query: 228 --PELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
P++ E+MR C Q RP+ +++ + +++
Sbjct: 254 NCPDML----FELMR------MCWQYNPKMRPSFLEIISSIKEEME 289
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCL-----SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+IG GAF VV R R+ G Q A+K + ++ T++ E + ++HP++V+
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L+ D +V+E+++ L ++ ++ L + H
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH--- 147
Query: 115 DPPIVHRDIKASNVLLDG--NFHP-KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYAL 171
D I+HRD+K NVLL N P K+GDFG+A ++ RV GT ++APE
Sbjct: 148 DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV-GTPHFMAPEVVK 206
Query: 172 LGQLTKKADVYSFGVLLLEIISG 194
K DV+ GV+L ++SG
Sbjct: 207 REPYGKPVDVWGCGVILFILLSG 229
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 24/222 (10%)
Query: 2 IGGGAFGVVYRGSLR-----DGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V +G + + I A E L E +++ + +P +V++I
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR----ANICLGTASGLSFLHE 112
G C E + +LV E E LG +KY+ + + + + G+ +L E
Sbjct: 73 GIC-EAESWMLVMEMAE--------LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 123
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYA 170
VHRD+ A NVLL + KI DFGL+K + + + G + + APE
Sbjct: 124 SN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 180
Query: 171 LLGQLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVE 211
+ + K+DV+SFGVL+ E S G+ + G ++ ++E
Sbjct: 181 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 222
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 136/286 (47%), Gaps = 35/286 (12%)
Query: 2 IGGGAFGVVY----RGSLRDG--TQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FG+VY +G ++D T++AIK ++ A S + EFL E ++ ++V+
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVS---LDWPTRANICLGT---ASGLS 108
L+G + +++ E + L + L + + + L P+ + + A G++
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 109 FLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAP 167
+L+ VHRD+ A N ++ +F KIGDFG+ + ++ + + + +++P
Sbjct: 153 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 168 EYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVD 227
E G T +DV+SFGV+L EI + ++ ++ + EG LL+ D
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL------RFVMEGGLLDKPD 263
Query: 228 --PELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
P++ E+MR C Q RP+ +++ + +++
Sbjct: 264 NCPDML----FELMR------MCWQYNPKMRPSFLEIISSIKEEME 299
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 93/210 (44%), Gaps = 13/210 (6%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+G GAFGVV+R + R G A K + + + EI + +RHP LV L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
+DN +++YE++ L + +K +S D GL +HE VH
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNK-MSED--EAVEYMRQVCKGLCHMHENN---YVH 172
Query: 121 RDIKASNVLLDGNFHP--KIGDFGL-AKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
D+K N++ K+ DFGL A L P V+T GT + APE A +
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGY 229
Query: 178 KADVYSFGVLLLEIISGRSSSKAAFGDDML 207
D++S GVL ++SG S D+ L
Sbjct: 230 YTDMWSVGVLSYILLSGLSPFGGENDDETL 259
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 136/286 (47%), Gaps = 35/286 (12%)
Query: 2 IGGGAFGVVY----RGSLRDG--TQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FG+VY +G ++D T++AIK ++ A S + EFL E ++ ++V+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVS---LDWPTRANICLGT---ASGLS 108
L+G + +++ E + L + L + + + L P+ + + A G++
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 109 FLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAP 167
+L+ VHRD+ A N ++ +F KIGDFG+ + ++ + + + +++P
Sbjct: 146 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 168 EYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVD 227
E G T +DV+SFGV+L EI + ++ ++ + EG LL+ D
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL------RFVMEGGLLDKPD 256
Query: 228 --PELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
P++ E+MR C Q RP+ +++ + +++
Sbjct: 257 NCPDML----FELMR------MCWQYNPKMRPSFLEIISSIKEEME 292
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 93/210 (44%), Gaps = 13/210 (6%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+G GAFGVV+R + R G A K + + + EI + +RHP LV L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
+DN +++YE++ L + +K +S D GL +HE VH
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNK-MSED--EAVEYMRQVCKGLCHMHENN---YVH 278
Query: 121 RDIKASNVLLDGNFHP--KIGDFGL-AKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
D+K N++ K+ DFGL A L P V+T GT + APE A +
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGY 335
Query: 178 KADVYSFGVLLLEIISGRSSSKAAFGDDML 207
D++S GVL ++SG S D+ L
Sbjct: 336 YTDMWSVGVLSYILLSGLSPFGGENDDETL 365
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 136/286 (47%), Gaps = 35/286 (12%)
Query: 2 IGGGAFGVVY----RGSLRDG--TQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FG+VY +G ++D T++AIK ++ A S + EFL E ++ ++V+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVS---LDWPTRANICLGT---ASGLS 108
L+G + +++ E + L + L + + + L P+ + + A G++
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 109 FLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAP 167
+L+ VHRD+ A N ++ +F KIGDFG+ + ++ + + + +++P
Sbjct: 147 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 203
Query: 168 EYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVD 227
E G T +DV+SFGV+L EI + ++ ++ + EG LL+ D
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL------RFVMEGGLLDKPD 257
Query: 228 --PELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
P++ E+MR C Q RP+ +++ + +++
Sbjct: 258 NCPDML----FELMR------MCWQYNPKMRPSFLEIISSIKEEME 293
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 135/290 (46%), Gaps = 43/290 (14%)
Query: 2 IGGGAFGVVY----RGSLRDG--TQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FG+VY +G ++D T++AIK ++ A S + EFL E ++ ++V+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVS---LDWPTRANICLGT---ASGLS 108
L+G + +++ E + L + L + + + L P+ + + A G++
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 109 FLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG----- 163
+L+ VHRD+ A N ++ +F KIGDFG+ + ++ G G
Sbjct: 147 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPVR 199
Query: 164 YLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLL 223
+++PE G T +DV+SFGV+L EI + ++ ++ + EG LL
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL------RFVMEGGLL 253
Query: 224 EIVD--PELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
+ D P++ E+MR C Q RP+ +++ + +++
Sbjct: 254 DKPDNCPDML----FELMR------MCWQYNPKMRPSFLEIISSIKEEME 293
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 136/286 (47%), Gaps = 35/286 (12%)
Query: 2 IGGGAFGVVY----RGSLRDG--TQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FG+VY +G ++D T++AIK ++ A S + EFL E ++ ++V+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVS---LDWPTRANICLGT---ASGLS 108
L+G + +++ E + L + L + + + L P+ + + A G++
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 109 FLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAP 167
+L+ VHRD+ A N ++ +F KIGDFG+ + ++ + + + +++P
Sbjct: 140 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 168 EYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVD 227
E G T +DV+SFGV+L EI + ++ ++ + EG LL+ D
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL------RFVMEGGLLDKPD 250
Query: 228 --PELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
P++ E+MR C Q RP+ +++ + +++
Sbjct: 251 NCPDML----FELMR------MCWQYNPKMRPSFLEIISSIKEEME 286
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 136/286 (47%), Gaps = 35/286 (12%)
Query: 2 IGGGAFGVVY----RGSLRDG--TQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FG+VY +G ++D T++AIK ++ A S + EFL E ++ ++V+
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVS---LDWPTRANICLGT---ASGLS 108
L+G + +++ E + L + L + + + L P+ + + A G++
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 109 FLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAP 167
+L+ VHRD+ A N ++ +F KIGDFG+ + ++ + + + +++P
Sbjct: 144 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 200
Query: 168 EYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVD 227
E G T +DV+SFGV+L EI + ++ ++ + EG LL+ D
Sbjct: 201 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL------RFVMEGGLLDKPD 254
Query: 228 --PELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
P++ E+MR C Q RP+ +++ + +++
Sbjct: 255 NCPDML----FELMR------MCWQYNPKMRPSFLEIISSIKEEME 290
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 136/286 (47%), Gaps = 35/286 (12%)
Query: 2 IGGGAFGVVY----RGSLRDG--TQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FG+VY +G ++D T++AIK ++ A S + EFL E ++ ++V+
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVS---LDWPTRANICLGT---ASGLS 108
L+G + +++ E + L + L + + + L P+ + + A G++
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 109 FLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAP 167
+L+ VHRD+ A N ++ +F KIGDFG+ + ++ + + + +++P
Sbjct: 175 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 231
Query: 168 EYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVD 227
E G T +DV+SFGV+L EI + ++ ++ + EG LL+ D
Sbjct: 232 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL------RFVMEGGLLDKPD 285
Query: 228 --PELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
P++ E+MR C Q RP+ +++ + +++
Sbjct: 286 NCPDML----FELMR------MCWQYNPKMRPSFLEIISSIKEEME 321
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 136/286 (47%), Gaps = 35/286 (12%)
Query: 2 IGGGAFGVVY----RGSLRDG--TQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FG+VY +G ++D T++AIK ++ A S + EFL E ++ ++V+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVS---LDWPTRANICLGT---ASGLS 108
L+G + +++ E + L + L + + + L P+ + + A G++
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 109 FLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAP 167
+L+ VHRD+ A N ++ +F KIGDFG+ + ++ + + + +++P
Sbjct: 146 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 168 EYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVD 227
E G T +DV+SFGV+L EI + ++ ++ + EG LL+ D
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL------RFVMEGGLLDKPD 256
Query: 228 --PELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
P++ E+MR C Q RP+ +++ + +++
Sbjct: 257 NCPDML----FELMR------MCWQYNPKMRPSFLEIISSIKEEME 292
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAE---SKQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G G FG V+ G A+K L E +K LTE ++ N RHP L L
Sbjct: 16 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 75
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC-LGTASGLSFLHEEAD 115
+ V EY L L S+ + S D RA S L +LH E +
Sbjct: 76 YSFQTHDRLCFVMEYANGGELFFHL--SRERVFSED---RARFYGAEIVSALDYLHSEKN 130
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKL-FPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
+V+RD+K N++LD + H KI DFGL K D T GT YLAPE
Sbjct: 131 --VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDND 186
Query: 175 LTKKADVYSFGVLLLEIISGR 195
+ D + GV++ E++ GR
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGR 207
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 15/213 (7%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAE---SKQGTKEFLTEIDMIWNIR-HPNLVQL 55
++G G+FG V +++ G A+K L + + +TE ++ R HP L QL
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 56 IGCCVEDNNRIL-VYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
CC + +R+ V E++ L + S+ D S L FLH++
Sbjct: 90 F-CCFQTPDRLFFVMEFVNGGDLMFHIQKSRR----FDEARARFYAAEIISALMFLHDKG 144
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
I++RD+K NVLLD H K+ DFG+ K N +T GT Y+APE
Sbjct: 145 ---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT-FCGTPDYIAPEILQEML 200
Query: 175 LTKKADVYSFGVLLLEIISGRSSSKAAFGDDML 207
D ++ GVLL E++ G + +A DD+
Sbjct: 201 YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLF 233
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 89/205 (43%), Gaps = 33/205 (16%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTK----EFLTEIDMIWNIRHPNLVQLIG 57
IG G+F VY+G L T + + + ++ TK F E + + ++HPN+V+
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 58 C---------CVEDNNRILVYEYLENNSLANALLGSKSKYVSL--DWPTRANICLGTASG 106
C+ +LV E + +L L K + + W C G
Sbjct: 93 SWESTVKGKKCI-----VLVTELXTSGTLKTYLKRFKVXKIKVLRSW------CRQILKG 141
Query: 107 LSFLHEEADPPIVHRDIKASNVLLDG-NFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYL 165
L FLH PPI+HRD+K N+ + G KIGD GLA L + V GT +
Sbjct: 142 LQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFX 197
Query: 166 APEYALLGQLTKKADVYSFGVLLLE 190
APE + + DVY+FG LE
Sbjct: 198 APE-XYEEKYDESVDVYAFGXCXLE 221
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 20/226 (8%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLS---AESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G G+FG V+ G + A+K +S + K + L E+ ++ + HPN+ +L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+ LV E L + ++ S+ ++ +D A I SG+++ H+
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVD---AARIIRQVLSGITYXHKN--- 145
Query: 117 PIVHRDIKASNVLLDG---NFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG 173
IVHRD+K N+LL+ + + +I DFGL+ F + GT Y+APE L G
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKXKDKIGTAYYIAPE-VLHG 202
Query: 174 QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVE---WTWKL 216
+K DV+S GV+L ++SG A D+L VE +T++L
Sbjct: 203 TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFEL 248
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAE---SKQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G G FG V+ G A+K L E +K LTE ++ N RHP L L
Sbjct: 17 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 76
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC-LGTASGLSFLHEEAD 115
+ V EY L L S+ + S D RA S L +LH E +
Sbjct: 77 YSFQTHDRLCFVMEYANGGELFFHL--SRERVFSED---RARFYGAEIVSALDYLHSEKN 131
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKL-FPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
+V+RD+K N++LD + H KI DFGL K D T GT YLAPE
Sbjct: 132 --VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDND 187
Query: 175 LTKKADVYSFGVLLLEIISGR 195
+ D + GV++ E++ GR
Sbjct: 188 YGRAVDWWGLGVVMYEMMCGR 208
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 103/212 (48%), Gaps = 23/212 (10%)
Query: 2 IGGGAFGVVYRGSLR-----DGTQ-IAIKCLSAESKQGTKE-FLTEIDMIWNIRHPNLVQ 54
+G FG VY+G L + TQ +AIK L +++ +E F E + ++HPN+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALL------------GSKSKYVSLDWPTRANICLG 102
L+G +D +++ Y + L L+ ++ +L+ P ++
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 103 TASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGT 161
A+G+ +L +VH+D+ NVL+ + KI D GL + ++ + +
Sbjct: 154 IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 162 MGYLAPEYALLGQLTKKADVYSFGVLLLEIIS 193
+ ++APE + G+ + +D++S+GV+L E+ S
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAE---SKQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G G FG V+ G A+K L E +K LTE ++ N RHP L L
Sbjct: 15 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 74
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC-LGTASGLSFLHEEAD 115
+ V EY L L S+ + S D RA S L +LH E +
Sbjct: 75 YSFQTHDRLCFVMEYANGGELFFHL--SRERVFSED---RARFYGAEIVSALDYLHSEKN 129
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKL-FPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
+V+RD+K N++LD + H KI DFGL K D T GT YLAPE
Sbjct: 130 --VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDND 185
Query: 175 LTKKADVYSFGVLLLEIISGR 195
+ D + GV++ E++ GR
Sbjct: 186 YGRAVDWWGLGVVMYEMMCGR 206
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 20/201 (9%)
Query: 2 IGGGAFGVVYRGSLRDGT---QIAIKCL--SAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G GA+G V RD + AIK + ++ S + L E+ ++ + HPN+++L
Sbjct: 45 LGSGAYGEVLL--CRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
+ N LV E + L + ++ + K+ +D A I SG+++LH+
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDEII-HRMKFNEVD---AAVIIKQVLSGVTYLHKH--- 155
Query: 117 PIVHRDIKASNVLLDGNFHP---KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG 173
IVHRD+K N+LL+ KI DFGL+ +F +N + R+ GT Y+APE L
Sbjct: 156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF-ENQKKMKERL-GTAYYIAPE-VLRK 212
Query: 174 QLTKKADVYSFGVLLLEIISG 194
+ +K DV+S GV+L +++G
Sbjct: 213 KYDEKCDVWSIGVILFILLAG 233
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTK---EFLTEIDMIWNIRHPNLVQLIG 57
+G G FG V G G ++A+K L+ + + + EI + RHP++++L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
++ +V EY+ L + + K LD + SG+ + H
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYI----CKNGRLDEKESRRLFQQILSGVDYCHRHM--- 136
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT- 176
+VHRD+K NVLLD + + KI DFGL+ + D G+ Y APE + G+L
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRXSCGSPNYAAPE-VISGRLYA 193
Query: 177 -KKADVYSFGVLLLEIISGRSSSKAAFGDD 205
+ D++S GV+L ++ G F DD
Sbjct: 194 GPEVDIWSSGVILYALLCG----TLPFDDD 219
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 115/266 (43%), Gaps = 28/266 (10%)
Query: 2 IGGGAFGVVYRGSLRDGTQ--IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGC 58
IG G+FG VY+G + + T+ +AIK + E + E + EI ++ P + + G
Sbjct: 27 IGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGS 85
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
++ ++ EYL S + L K L+ A I GL +LH E
Sbjct: 86 YLKSTKLWIIMEYLGGGSALDLL-----KPGPLEETYIATILREILKGLDYLHSERK--- 137
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
+HRDIKA+NVLL K+ DFG+A D + V GT ++APE K
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDFK 196
Query: 179 ADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFPEKEV 238
AD++S G+ +E+ G + +L L+ + P L K
Sbjct: 197 ADIWSLGITAIELAKGEPPNSDLHPMRVLFLIP------------KNSPPTLEGQHSKPF 244
Query: 239 MRFIKVGLFCTQAGAHYRPTMKQVVE 264
F++ C +RPT K++++
Sbjct: 245 KEFVEA---CLNKDPRFRPTAKELLK 267
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 103/212 (48%), Gaps = 23/212 (10%)
Query: 2 IGGGAFGVVYRGSLR-----DGTQ-IAIKCLSAESKQGTKE-FLTEIDMIWNIRHPNLVQ 54
+G FG VY+G L + TQ +AIK L +++ +E F E + ++HPN+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALL------------GSKSKYVSLDWPTRANICLG 102
L+G +D +++ Y + L L+ ++ +L+ P ++
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 103 TASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGT 161
A+G+ +L +VH+D+ NVL+ + KI D GL + ++ + +
Sbjct: 137 IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 162 MGYLAPEYALLGQLTKKADVYSFGVLLLEIIS 193
+ ++APE + G+ + +D++S+GV+L E+ S
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 14/200 (7%)
Query: 1 MIGGGAFGVVY--RGSLR--DGTQIAIKCLSAESKQGTKEFLT--EIDMIWNIRHPNLVQ 54
++G G+FG V+ R R G A+K L + + T E D++ ++ HP +V+
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVK 94
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + L+ ++L L L SK V A GL LH
Sbjct: 95 LHYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEEDVKFYLAELALGLDHLHSLG 150
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
I++RD+K N+LLD H K+ DFGL+K D+ + GT+ Y+APE
Sbjct: 151 ---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS-FCGTVEYMAPEVVNRQG 206
Query: 175 LTKKADVYSFGVLLLEIISG 194
+ AD +S+GVL+ E+++G
Sbjct: 207 HSHSADWWSYGVLMFEMLTG 226
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 135/286 (47%), Gaps = 35/286 (12%)
Query: 2 IGGGAFGVVY----RGSLRDG--TQIAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+G G+FG+VY +G ++D T++AIK ++ A S + EFL E ++ ++V+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVS---LDWPTRANICLGT---ASGLS 108
L+G + +++ E + L + L + + + L P+ + + A G++
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 109 FLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDNVTHVSTRVAGTMGYLAP 167
+L+ VHRD+ A N + +F KIGDFG+ + ++ + + + +++P
Sbjct: 140 YLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 168 EYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVD 227
E G T +DV+SFGV+L EI + ++ ++ + EG LL+ D
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL------RFVMEGGLLDKPD 250
Query: 228 --PELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVH 271
P++ E+MR C Q RP+ +++ + +++
Sbjct: 251 NCPDMLL----ELMR------MCWQYNPKMRPSFLEIISSIKEEME 286
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 23/226 (10%)
Query: 4 GGAFGVVYRGSLRDGTQIAIKCLSAESKQGTK---EFLTEIDMIWNIRHPNLVQLIGCCV 60
GG V LRD +A+K L A+ + F E + HP +V +
Sbjct: 23 GGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGE 82
Query: 61 EDNNR----ILVYEYLENNSLANALLGSKSKYVSLDWPTRA-NICLGTASGLSFLHEEAD 115
+ +V EY++ +L + + P RA + L+F H+
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-----TPKRAIEVIADACQALNFSHQNG- 136
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPD--NVTHVSTRVAGTMGYLAPEYALLG 173
I+HRD+K +N+L+ K+ DFG+A+ D N + V GT YL+PE A
Sbjct: 137 --IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGD 194
Query: 174 QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREE 219
+ ++DVYS G +L E+++G + F D + V + +RE+
Sbjct: 195 SVDARSDVYSLGCVLYEVLTG----EPPFTGDSPVSVAY-QHVRED 235
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 18/201 (8%)
Query: 4 GGAFGVVYRGSLRDGTQIAIKCLSAESKQGTK---EFLTEIDMIWNIRHPNLVQLIGCCV 60
GG V LRD +A+K L A+ + F E + HP +V +
Sbjct: 23 GGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGE 82
Query: 61 EDNNR----ILVYEYLENNSLANALLGSKSKYVSLDWPTRA-NICLGTASGLSFLHEEAD 115
+ +V EY++ +L + + P RA + L+F H+
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-----TPKRAIEVIADACQALNFSHQNG- 136
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA--GTMGYLAPEYALLG 173
I+HRD+K +N+++ K+ DFG+A+ D+ V+ A GT YL+PE A
Sbjct: 137 --IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 174 QLTKKADVYSFGVLLLEIISG 194
+ ++DVYS G +L E+++G
Sbjct: 195 SVDARSDVYSLGCVLYEVLTG 215
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 100/211 (47%), Gaps = 31/211 (14%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGT-KEFLTEIDMIWNIRHPNLVQLIGCCV 60
+G G +G V+RG L G +A+K S+ +Q +E TEI +RH N++ I +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRE--TEIYNTVLLRHDNILGFIASDM 72
Query: 61 EDNNR----ILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE--- 113
N L+ Y E+ SL + L + +L+ + + A GL+ LH E
Sbjct: 73 TSRNSSTQLWLITHYHEHGSLYDFL-----QRQTLEPHLALRLAVSAACGLAHLHVEIFG 127
Query: 114 --ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHV----STRVAGTMGYLAP 167
P I HRD K+ NVL+ N I D GLA + ++ + RV GT Y+AP
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTKRYMAP 186
Query: 168 EYALLGQLT-------KKADVYSFGVLLLEI 191
E L Q+ K D+++FG++L EI
Sbjct: 187 E-VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 23/226 (10%)
Query: 4 GGAFGVVYRGSLRDGTQIAIKCLSAESKQGTK---EFLTEIDMIWNIRHPNLVQLIGCCV 60
GG V LRD +A+K L A+ + F E + HP +V +
Sbjct: 23 GGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGE 82
Query: 61 EDNNR----ILVYEYLENNSLANALLGSKSKYVSLDWPTRA-NICLGTASGLSFLHEEAD 115
+ +V EY++ +L + + P RA + L+F H+
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-----TPKRAIEVIADACQALNFSHQNG- 136
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA--GTMGYLAPEYALLG 173
I+HRD+K +N+++ K+ DFG+A+ D+ V+ A GT YL+PE A
Sbjct: 137 --IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 174 QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREE 219
+ ++DVYS G +L E+++G + F D + V + +RE+
Sbjct: 195 SVDARSDVYSLGCVLYEVLTG----EPPFTGDSPVSVAY-QHVRED 235
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 31/275 (11%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL-SAESKQGTKEFLTEIDMIWNIRH-PNLVQLIGC 58
IG GA+G V + + QI A+K + S ++ K+ L ++D++ P +VQ G
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLD--WPTR--ANICLGTASGLSFLHEEA 114
+ + + E L + S K Y LD P I L T L+ L E
Sbjct: 90 LFREGDCWICME-LMSTSFDKFY---KYVYSVLDDVIPEEILGKITLATVKALNHLKENL 145
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEY----A 170
I+HRDIK SN+LLD + + K+ DFG++ D++ TR AG Y+APE A
Sbjct: 146 K--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA--KTRDAGCRPYMAPERIDPSA 201
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPEL 230
++DV+S G+ L E+ +GR +W + ++++ P+L
Sbjct: 202 SRQGYDVRSDVWSLGITLYELATGR-----------FPYPKWNSVFDQLTQVVKGDPPQL 250
Query: 231 TQFPEKEVM-RFIKVGLFCTQAGAHYRPTMKQVVE 264
+ E+E FI C RP K++++
Sbjct: 251 SNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 93/219 (42%), Gaps = 27/219 (12%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ--IAIKCL---------SAESKQGTKEFLTEIDMIWNIRH 49
++G G+FG V R GT+ AIK L E K L +D +
Sbjct: 26 VLGKGSFGKVMLAD-RKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLD-----KP 79
Query: 50 PNLVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSF 109
P L QL C + V EY+ L + + P + GL F
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI----QQVGKFKEPQAVFYAAEISIGLFF 135
Query: 110 LHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTR-VAGTMGYLAPE 168
LH+ I++RD+K NV+LD H KI DFG+ K + V+TR GT Y+APE
Sbjct: 136 LHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDYIAPE 190
Query: 169 YALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDML 207
K D +++GVLL E+++G+ D++
Sbjct: 191 IIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELF 229
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 99/208 (47%), Gaps = 27/208 (12%)
Query: 2 IGGGAFGVVYRGSLRD---GTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQ--- 54
IG GA+G+V S D T++AIK +S E + + L EI ++ RH N++
Sbjct: 51 IGEGAYGMV--SSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRD 108
Query: 55 -LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFL 110
L +E + + + L L L KS+ +S D +IC GL ++
Sbjct: 109 ILRASTLEAMRDVYIVQDLMETDLYKLL---KSQQLSND-----HICYFLYQILRGLKYI 160
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPE 168
H ++HRD+K SN+L++ KI DFGLA++ H T T Y APE
Sbjct: 161 HSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPE 217
Query: 169 YALLGQ-LTKKADVYSFGVLLLEIISGR 195
L + TK D++S G +L E++S R
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL---- 55
IG GA+G+V + ++AIK +S E + + L EI ++ RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFLHE 112
+E + + + L L L K++++S D +IC GL ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSND-----HICYFLYQILRGLKYIHS 142
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPEYA 170
++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 143 AN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 171 LLGQ-LTKKADVYSFGVLLLEIISGR 195
L + TK D++S G +L E++S R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 46/226 (20%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCL--SAESKQGTKEFLTEIDMIWNIR-HPNLVQLIG 57
+G GA+G+V++ R G +A+K + + ++ + EI ++ + H N+V L+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 58 CCVEDNNR--ILVYEYLENN----SLANALLGSKSKYVSLDWPTRANICLGTASGLSFLH 111
DN+R LV++Y+E + AN L +YV + +LH
Sbjct: 77 VLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYV----------VYQLIKVIKYLH 126
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFP--------------------DNV 151
++HRD+K SN+LL+ H K+ DFGL++ F D+
Sbjct: 127 SGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDD 183
Query: 152 THVSTRVAGTMGYLAPEYALLG--QLTKKADVYSFGVLLLEIISGR 195
+ T T Y APE LLG + TK D++S G +L EI+ G+
Sbjct: 184 QPILTDYVATRWYRAPE-ILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 20/218 (9%)
Query: 2 IGGGAFGVVYRG-SLRDGTQ-IAIKCLSAESKQ-----GTKEFLTEIDMIWNIRHPNLVQ 54
IG GA+G V++ L++G + +A+K + ++ + T + + + HPN+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 55 LIGCCV-----EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSF 109
L C + LV+E+++ + L L K + T ++ GL F
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQD-LTTYL--DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 110 LHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEY 169
LH +VHRD+K N+L+ + K+ DFGLA+++ + T V T+ Y APE
Sbjct: 136 LHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWYRAPEV 190
Query: 170 ALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDML 207
L D++S G + E+ + + + D L
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL 228
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL---- 55
IG GA+G+V + ++AIK +S E + + L EI ++ RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFLHE 112
+E + + + L L L K++++S D +IC GL ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSND-----HICYFLYQILRGLKYIHS 146
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPEYA 170
++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 147 AN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 171 LLGQ-LTKKADVYSFGVLLLEIISGR 195
L + TK D++S G +L E++S R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTK-EFLTEIDMIWNIRHPNLVQLIGCC 59
+G G GVV++ S + G +A K + E K + + + E+ ++ P +V G
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
D + E+++ SL L K + + + GL++L E+ I+
Sbjct: 101 YSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IM 154
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+K SN+L++ K+ DFG++ D+ ++ GT Y++PE + ++
Sbjct: 155 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQS 211
Query: 180 DVYSFGVLLLEIISGR 195
D++S G+ L+E+ GR
Sbjct: 212 DIWSMGLSLVEMAVGR 227
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL---- 55
IG GA+G+V + ++AIK +S E + + L EI ++ RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFLHE 112
+E + + + L L L K++++S D +IC GL ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSND-----HICYFLYQILRGLKYIHS 142
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPEYA 170
++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 143 AN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 171 LLGQ-LTKKADVYSFGVLLLEIISGR 195
L + TK D++S G +L E++S R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC- 58
IG GA+G+V + ++AIK +S E + + L EI ++ RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 59 ---CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFLHE 112
+E + + + L L L K++++S D +IC GL ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSND-----HICYFLYQILRGLKYIHS 142
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPEYA 170
++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 143 AN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 171 LLGQ-LTKKADVYSFGVLLLEIISGR 195
L + TK D++S G +L E++S R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL---- 55
IG GA+G+V + ++AIK +S E + + L EI ++ RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFLHE 112
+E + + + L L L K++++S D +IC GL ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSND-----HICYFLYQILRGLKYIHS 146
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPEYA 170
++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 147 AN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 171 LLGQ-LTKKADVYSFGVLLLEIISGR 195
L + TK D++S G +L E++S R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 20/218 (9%)
Query: 2 IGGGAFGVVYRG-SLRDGTQ-IAIKCLSAESKQ-----GTKEFLTEIDMIWNIRHPNLVQ 54
IG GA+G V++ L++G + +A+K + ++ + T + + + HPN+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 55 LIGCCV-----EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSF 109
L C + LV+E+++ + L L K + T ++ GL F
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQD-LTTYL--DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 110 LHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEY 169
LH +VHRD+K N+L+ + K+ DFGLA+++ + T V T+ Y APE
Sbjct: 136 LHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWYRAPEV 190
Query: 170 ALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDML 207
L D++S G + E+ + + + D L
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL 228
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTK-EFLTEIDMIWNIRHPNLVQLIGCC 59
+G G GVV++ S + G +A K + E K + + + E+ ++ P +V G
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
D + E+++ SL L K + + + GL++L E+ I+
Sbjct: 93 YSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IM 146
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+K SN+L++ K+ DFG++ D+ ++ GT Y++PE + ++
Sbjct: 147 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQS 203
Query: 180 DVYSFGVLLLEIISGR 195
D++S G+ L+E+ GR
Sbjct: 204 DIWSMGLSLVEMAVGR 219
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 20/218 (9%)
Query: 2 IGGGAFGVVYRG-SLRDGTQ-IAIKCLSAESKQ-----GTKEFLTEIDMIWNIRHPNLVQ 54
IG GA+G V++ L++G + +A+K + ++ + T + + + HPN+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 55 LIGCCV-----EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSF 109
L C + LV+E+++ + L L K + T ++ GL F
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQD-LTTYL--DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 110 LHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEY 169
LH +VHRD+K N+L+ + K+ DFGLA+++ + T V T+ Y APE
Sbjct: 136 LHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWYRAPEV 190
Query: 170 ALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDML 207
L D++S G + E+ + + + D L
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL 228
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL---- 55
IG GA+G+V + ++AIK +S E + + L EI ++ RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFLHE 112
+E + + + L L L K++++S D +IC GL ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSND-----HICYFLYQILRGLKYIHS 142
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPEYA 170
++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 143 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 171 LLGQ-LTKKADVYSFGVLLLEIISGR 195
L + TK D++S G +L E++S R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL---- 55
IG GA+G+V + ++AIK +S E + + L EI ++ RH N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFLHE 112
+E + + + L L L K++++S D +IC GL ++H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSND-----HICYFLYQILRGLKYIHS 147
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPEYA 170
++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 148 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 204
Query: 171 LLGQ-LTKKADVYSFGVLLLEIISGR 195
L + TK D++S G +L E++S R
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTK-EFLTEIDMIWNIRHPNLVQLIGCC 59
+G G GVV++ S + G +A K + E K + + + E+ ++ P +V G
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
D + E+++ SL L K + + + GL++L E+ I+
Sbjct: 136 YSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IM 189
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+K SN+L++ K+ DFG++ D+ ++ GT Y++PE + ++
Sbjct: 190 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQS 246
Query: 180 DVYSFGVLLLEIISGR 195
D++S G+ L+E+ GR
Sbjct: 247 DIWSMGLSLVEMAVGR 262
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL---- 55
IG GA+G+V + ++AIK +S E + + L EI ++ RH N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFLHE 112
+E + + + L L L K++++S D +IC GL ++H
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSND-----HICYFLYQILRGLKYIHS 148
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPEYA 170
++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 149 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 205
Query: 171 LLGQ-LTKKADVYSFGVLLLEIISGR 195
L + TK D++S G +L E++S R
Sbjct: 206 LNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL---- 55
IG GA+G+V + ++AIK +S E + + L EI ++ RH N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFLHE 112
+E + + + L L L K++++S D +IC GL ++H
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSND-----HICYFLYQILRGLKYIHS 139
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPEYA 170
++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 140 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 196
Query: 171 LLGQ-LTKKADVYSFGVLLLEIISGR 195
L + TK D++S G +L E++S R
Sbjct: 197 LNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL---- 55
IG GA+G+V + ++AIK +S E + + L EI ++ RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFLHE 112
+E + + + L L L K++++S D +IC GL ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSND-----HICYFLYQILRGLKYIHS 146
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPEYA 170
++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 147 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 171 LLGQ-LTKKADVYSFGVLLLEIISGR 195
L + TK D++S G +L E++S R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTK-EFLTEIDMIWNIRHPNLVQLIGCC 59
+G G GVV++ S + G +A K + E K + + + E+ ++ P +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
D + E+++ SL L K + + + GL++L E+ I+
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IM 127
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+K SN+L++ K+ DFG++ D+ ++ GT Y++PE + ++
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 180 DVYSFGVLLLEIISGR 195
D++S G+ L+E+ GR
Sbjct: 185 DIWSMGLSLVEMAVGR 200
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL---- 55
IG GA+G+V + ++AIK +S E + + L EI ++ RH N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFLHE 112
+E + + + L L L K++++S D +IC GL ++H
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSND-----HICYFLYQILRGLKYIHS 162
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPEYA 170
++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 163 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 171 LLGQ-LTKKADVYSFGVLLLEIISGR 195
L + TK D++S G +L E++S R
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC- 58
IG GA+G+V + ++AIK +S E + + L EI ++ RH N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 59 ---CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFLHE 112
+E + + + L L L K++++S D +IC GL ++H
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSND-----HICYFLYQILRGLKYIHS 150
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPEYA 170
++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 151 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 207
Query: 171 LLGQ-LTKKADVYSFGVLLLEIISGR 195
L + TK D++S G +L E++S R
Sbjct: 208 LNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC- 58
IG GA+G+V + ++AIK +S E + + L EI ++ RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 59 ---CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFLHE 112
+E + + + L L L K++++S D +IC GL ++H
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSND-----HICYFLYQILRGLKYIHS 142
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPEYA 170
++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 143 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 171 LLGQ-LTKKADVYSFGVLLLEIISGR 195
L + TK D++S G +L E++S R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTK-EFLTEIDMIWNIRHPNLVQLIGCC 59
+G G GVV++ S + G +A K + E K + + + E+ ++ P +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
D + E+++ SL L K + + + GL++L E+ I+
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IM 127
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+K SN+L++ K+ DFG++ D+ ++ GT Y++PE + ++
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 180 DVYSFGVLLLEIISGR 195
D++S G+ L+E+ GR
Sbjct: 185 DIWSMGLSLVEMAVGR 200
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTK-EFLTEIDMIWNIRHPNLVQLIGCC 59
+G G GVV++ S + G +A K + E K + + + E+ ++ P +V G
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
D + E+++ SL L K + + + GL++L E+ I+
Sbjct: 77 YSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IM 130
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+K SN+L++ K+ DFG++ D ++ GT Y++PE + ++
Sbjct: 131 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDE---MANEFVGTRSYMSPERLQGTHYSVQS 187
Query: 180 DVYSFGVLLLEIISGR 195
D++S G+ L+E+ GR
Sbjct: 188 DIWSMGLSLVEMAVGR 203
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 19/200 (9%)
Query: 2 IGGGAFGVVYRGS-LRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLIGC 58
IG G F V + G ++A+K + T ++ E+ ++ + HPN+V+L
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
+ LV EY + + L+ + RA S + + H++ I
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGR---MKEKEARAKF-RQIVSAVQYCHQKY---I 135
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK- 177
VHRD+KA N+LLDG+ + KI DFG + F V + G+ Y APE L Q K
Sbjct: 136 VHRDLKAENLLLDGDMNIKIADFGFSNEF--TVGNKLDTFCGSPPYAAPE---LFQGKKY 190
Query: 178 ---KADVYSFGVLLLEIISG 194
+ DV+S GV+L ++SG
Sbjct: 191 DGPEVDVWSLGVILYTLVSG 210
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTK-EFLTEIDMIWNIRHPNLVQLIGCC 59
+G G GVV++ S + G +A K + E K + + + E+ ++ P +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
D + E+++ SL L K + + + GL++L E+ I+
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IM 127
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+K SN+L++ K+ DFG++ D+ ++ GT Y++PE + ++
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 180 DVYSFGVLLLEIISGR 195
D++S G+ L+E+ GR
Sbjct: 185 DIWSMGLSLVEMAVGR 200
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL---- 55
IG GA+G+V + ++AIK +S E + + L EI ++ RH N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFLHE 112
+E + + + L L L K++++S D +IC GL ++H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSND-----HICYFLYQILRGLKYIHS 140
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPEYA 170
++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 141 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 171 LLGQ-LTKKADVYSFGVLLLEIISGR 195
L + TK D++S G +L E++S R
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL---- 55
IG GA+G+V + ++AIK +S E + + L EI ++ RH N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFLHE 112
+E + + + L L L K++++S D +IC GL ++H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSND-----HICYFLYQILRGLKYIHS 144
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPEYA 170
++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 145 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 171 LLGQ-LTKKADVYSFGVLLLEIISGR 195
L + TK D++S G +L E++S R
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL---- 55
IG GA+G+V + ++AIK +S E + + L EI ++ RH N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFLHE 112
+E + + + L L L K++++S D +IC GL ++H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSND-----HICYFLYQILRGLKYIHS 140
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPEYA 170
++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 141 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 171 LLGQ-LTKKADVYSFGVLLLEIISGR 195
L + TK D++S G +L E++S R
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTK-EFLTEIDMIWNIRHPNLVQLIGCC 59
+G G GVV++ S + G +A K + E K + + + E+ ++ P +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
D + E+++ SL L K + + + GL++L E+ I+
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IM 127
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+K SN+L++ K+ DFG++ D+ ++ GT Y++PE + ++
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 180 DVYSFGVLLLEIISGR 195
D++S G+ L+E+ GR
Sbjct: 185 DIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTK-EFLTEIDMIWNIRHPNLVQLIGCC 59
+G G GVV++ S + G +A K + E K + + + E+ ++ P +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
D + E+++ SL L K + + + GL++L E+ I+
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKHK--IM 127
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+K SN+L++ K+ DFG++ D+ ++ GT Y++PE + ++
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 180 DVYSFGVLLLEIISGR 195
D++S G+ L+E+ GR
Sbjct: 185 DIWSMGLSLVEMAVGR 200
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTK-EFLTEIDMIWNIRHPNLVQLIGCC 59
+G G GVV + R G +A K + E K + + + E+ ++ P +V G
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 83
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
D + E+++ SL L +K + + + GL++L E+ I+
Sbjct: 84 YSDGEISICMEHMDGGSLDQVLKEAKR----IPEEILGKVSIAVLRGLAYLREKHQ--IM 137
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKA 179
HRD+K SN+L++ K+ DFG++ D+ ++ GT Y+APE + ++
Sbjct: 138 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMAPERLQGTHYSVQS 194
Query: 180 DVYSFGVLLLEIISGR 195
D++S G+ L+E+ GR
Sbjct: 195 DIWSMGLSLVELAVGR 210
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQLIGCC 59
IG GA+G+V + ++AIK +S E + + L EI ++ RH N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG----- 89
Query: 60 VEDNNRILVYEYLENNSLANALLGSK-SKYVSLDWPTRANICL---GTASGLSFLHEEAD 115
+ D R E +++ + L+ + K + + +IC GL ++H
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSAN- 148
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPEYALLG 173
++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE L
Sbjct: 149 --VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 174 Q-LTKKADVYSFGVLLLEIISGR 195
+ TK D++S G +L E++S R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 58/100 (58%), Gaps = 9/100 (9%)
Query: 97 ANICLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVST 156
A IC GL LH E IV+RD+K N+LLD + H +I D GLA P+ T +
Sbjct: 293 AEIC----CGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKG 344
Query: 157 RVAGTMGYLAPEYALLGQLTKKADVYSFGVLLLEIISGRS 196
RV GT+GY+APE + T D ++ G LL E+I+G+S
Sbjct: 345 RV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS 383
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 58/100 (58%), Gaps = 9/100 (9%)
Query: 97 ANICLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVST 156
A IC GL LH E IV+RD+K N+LLD + H +I D GLA P+ T +
Sbjct: 293 AEIC----CGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKG 344
Query: 157 RVAGTMGYLAPEYALLGQLTKKADVYSFGVLLLEIISGRS 196
RV GT+GY+APE + T D ++ G LL E+I+G+S
Sbjct: 345 RV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS 383
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 120/271 (44%), Gaps = 35/271 (12%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTKE---FLTEIDMIWNIRHPNLVQLIG 57
+G GA+G V + G + AIK + S T L E+ ++ + HPN+++L
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ N LV E L + ++ + K+ +D A I SG ++LH+
Sbjct: 89 FFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVD---AAVIMKQVLSGTTYLHKHN--- 141
Query: 118 IVHRDIKASNVLLDGNFHP---KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
IVHRD+K N+LL+ KI DFGL+ F V GT Y+APE L +
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKERLGTAYYIAPE-VLRKK 198
Query: 175 LTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVE----------WTWKLREEGRLLE 224
+K DV+S GV+L ++ G ++L VE WT E +L++
Sbjct: 199 YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVK 258
Query: 225 IVDPELTQFPEK-----EVMRFIKVGLFCTQ 250
++ LT P K E + + FC+Q
Sbjct: 259 LM---LTYEPSKRISAEEALNHPWIVKFCSQ 286
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL---- 55
IG GA+G+V + ++AIK +S E + + L EI ++ RH N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFLHE 112
+E + + + L L L K++++S D +IC GL ++H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSND-----HICYFLYQILRGLKYIHS 144
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPEYA 170
++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 145 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 171 LLGQ-LTKKADVYSFGVLLLEIISGR 195
L + TK D++S G +L E++S R
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 127/301 (42%), Gaps = 45/301 (14%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+IG G FG VY G I + + +++ K F E+ RH N+V +G C+
Sbjct: 40 LIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM 99
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
+ ++ + +L + + +K + LD I G+ +LH + I+H
Sbjct: 100 SPPHLAIITSLCKGRTLYSVVRDAK---IVLDVNKTRQIAQEIVKGMGYLHAKG---ILH 153
Query: 121 RDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTR------VAGTMGYLAPEYALLGQ 174
+D+K+ NV D N I DFGL + V R G + +LAPE ++ Q
Sbjct: 154 KDLKSKNVFYD-NGKVVITDFGLFSI--SGVLQAGRREDKLRIQNGWLCHLAPE--IIRQ 208
Query: 175 L-----------TKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLL 223
L +K +DV++ G + E+ + K + ++ W++
Sbjct: 209 LSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII------WQMGTG---- 258
Query: 224 EIVDPELTQFPE-KEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLNEKALTEPGV 282
+ P L+Q KE+ + LFC RPT ++++ML K N + L+ PG
Sbjct: 259 --MKPNLSQIGMGKEISDIL---LFCWAFEQEERPTFTKLMDMLEKLPKRNRR-LSHPGH 312
Query: 283 Y 283
+
Sbjct: 313 F 313
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 2 IGGGAFGVV---YRGSLRD--GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V L D G +A+K L ++F EI ++ + +V+
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 57 GCCVEDNNRIL--VYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
G + L V EYL + L + L +++ LD G+ +L
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYLGSRR 134
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYALL 172
VHRD+ A N+L++ H KI DFGLAKL P + + R G + + APE
Sbjct: 135 ---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 191
Query: 173 GQLTKKADVYSFGVLLLEIIS 193
++++DV+SFGV+L E+ +
Sbjct: 192 NIFSRQSDVWSFGVVLYELFT 212
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL---- 55
IG GA+G+V + ++AI+ +S E + + L EI ++ RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFLHE 112
+E + + + L L L K++++S D +IC GL ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSND-----HICYFLYQILRGLKYIHS 146
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPEYA 170
++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 147 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 171 LLGQ-LTKKADVYSFGVLLLEIISGR 195
L + TK D++S G +L E++S R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLS-AESKQGTKEFLTEIDMIWNIRH-PNLVQLIGC 58
+G G G V++ R G IA+K + + +K+ K L ++D++ P +VQ G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR--ANICLGTASGLSFLHEEADP 116
+ + + + E + + A L K + P R + + L +L E+
Sbjct: 93 FITNTDVFIAMELM--GTCAEKL----KKRMQGPIPERILGKMTVAIVKALYYLKEKHG- 145
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRD+K SN+LLD K+ DFG++ D+ R AG Y+APE T
Sbjct: 146 -VIHRDVKPSNILLDERGQIKLCDFGISGRLVDD--KAKDRSAGCAAYMAPERIDPPDPT 202
Query: 177 K-----KADVYSFGVLLLEIISGR 195
K +ADV+S G+ L+E+ +G+
Sbjct: 203 KPDYDIRADVWSLGISLVELATGQ 226
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL---- 55
IG GA+G+V + ++AIK +S E + + L EI ++ RH N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFLHE 112
+E + + + L L L K++++S D +IC GL ++H
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSND-----HICYFLYQILRGLKYIHS 144
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPEYA 170
++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 145 AN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 171 LLGQ-LTKKADVYSFGVLLLEIISGR 195
L + TK D++S G +L E++S R
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 2 IGGGAFGVV---YRGSLRD--GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V L D G +A+K L ++F EI ++ + +V+
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 57 GCCVEDNNRIL--VYEYLENNSLANALLGSKSKY-VSLDWPTRANICLGTASGLSFLHEE 113
G + L V EYL + L + L +++ S + IC G+ +L
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC----KGMEYLGSR 134
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAG--TMGYLAPEYAL 171
VHRD+ A N+L++ H KI DFGLAKL P + + R G + + APE
Sbjct: 135 R---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 191
Query: 172 LGQLTKKADVYSFGVLLLEIIS 193
++++DV+SFGV+L E+ +
Sbjct: 192 DNIFSRQSDVWSFGVVLYELFT 213
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L S K+G + L EI++ ++RHPN++++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 58 CCVEDNNRI-LVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
D RI L+ E+ L L K+ D A A L + HE
Sbjct: 82 Y-FHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELADALHYCHERK-- 134
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRDIK N+L+ KI DFG + P + + GT+ YL PE
Sbjct: 135 -VIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTLDYLPPEMIEGKTHD 190
Query: 177 KKADVYSFGVLLLEIISG 194
+K D++ GVL E + G
Sbjct: 191 EKVDLWCAGVLCYEFLVG 208
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 26/207 (12%)
Query: 2 IGGGAFGVVYRGSLRD---GTQIAIKCLSAESKQGTKEFLT-----EIDMIWNIR---HP 50
IG GA+G VY+ RD G +A+K + + G L E+ ++ + HP
Sbjct: 17 IGVGAYGTVYKA--RDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHP 74
Query: 51 NLVQLIGCCVEDNNR-----ILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTAS 105
N+V+L+ C LV+E+++ + L L K+ L T ++
Sbjct: 75 NVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYL--DKAPPPGLPAETIKDLMRQFLR 131
Query: 106 GLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYL 165
GL FLH IVHRD+K N+L+ K+ DFGLA+++ + T V T+ Y
Sbjct: 132 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALTPVVVTLWYR 186
Query: 166 APEYALLGQLTKKADVYSFGVLLLEII 192
APE L D++S G + E+
Sbjct: 187 APEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L S K+G + L EI++ ++RHPN++++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 58 CCVEDNNRI-LVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
D RI L+ E+ L L K+ D A A L + HE
Sbjct: 82 Y-FHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELADALHYCHERK-- 134
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRDIK N+L+ KI DFG + P + + GT+ YL PE
Sbjct: 135 -VIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTLDYLPPEMIEGKTHD 190
Query: 177 KKADVYSFGVLLLEIISG 194
+K D++ GVL E + G
Sbjct: 191 EKVDLWCAGVLCYEFLVG 208
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 16/198 (8%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L S K+G + L EI++ ++RHPN++++
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 58 CCVEDNNRI-LVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
D RI L+ E+ L L K+ D A A L + HE
Sbjct: 83 Y-FHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELADALHYCHERK-- 135
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRDIK N+L+ KI DFG + P + + GT+ YL PE
Sbjct: 136 -VIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTLDYLPPEMIEGKTHD 191
Query: 177 KKADVYSFGVLLLEIISG 194
+K D++ GVL E + G
Sbjct: 192 EKVDLWCAGVLCYEFLVG 209
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 2 IGGGAFGVV---YRGSLRD--GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V L D G +A+K L ++F EI ++ + +V+
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 57 GCCVEDNNRIL--VYEYLENNSLANALLGSKSKY-VSLDWPTRANICLGTASGLSFLHEE 113
G + L V EYL + L + L +++ S + IC G+ +L
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC----KGMEYLGSR 146
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGT--MGYLAPEYAL 171
VHRD+ A N+L++ H KI DFGLAKL P + + R G + + APE
Sbjct: 147 R---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 203
Query: 172 LGQLTKKADVYSFGVLLLEIIS 193
++++DV+SFGV+L E+ +
Sbjct: 204 DNIFSRQSDVWSFGVVLYELFT 225
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 114/266 (42%), Gaps = 28/266 (10%)
Query: 2 IGGGAFGVVYRGSLRDGTQ--IAIKCLS-AESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G+FG V++G + + TQ +AIK + E++ ++ EI ++ + + G
Sbjct: 31 IGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGS 89
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
++ + ++ EYL S + L D A + GL +LH E
Sbjct: 90 YLKGSKLWIIMEYLGGGSALDLLRAG-----PFDEFQIATMLKEILKGLDYLHSEKK--- 141
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
+HRDIKA+NVLL K+ DFG+A D +T V GT ++APE K
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSAYDSK 200
Query: 179 ADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFPEKEV 238
AD++S G+ +E+ G + +L L+ + P L K
Sbjct: 201 ADIWSLGITAIELAKGEPPNSDMHPMRVLFLIP------------KNNPPTLVGDFTKSF 248
Query: 239 MRFIKVGLFCTQAGAHYRPTMKQVVE 264
FI C +RPT K++++
Sbjct: 249 KEFIDA---CLNKDPSFRPTAKELLK 271
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 1 MIGGGAFGVVYR-GSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCC 59
++GGG FG V++ G ++A K + + +E EI ++ + H NL+QL
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPT-RANICLGTASGLSFLHEEADPPI 118
N+ +LV EY++ L + ++ LD IC G+ +H+ I
Sbjct: 156 ESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQIC----EGIRHMHQMY---I 208
Query: 119 VHRDIKASNVLL---DGNFHPKIGDFGLAKLF-PDNVTHVSTRVAGTMGYLAPEYALLGQ 174
+H D+K N+L D KI DFGLA+ + P V+ GT +LAPE
Sbjct: 209 LHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPREKLKVNF---GTPEFLAPEVVNYDF 264
Query: 175 LTKKADVYSFGVLLLEIISGRS 196
++ D++S GV+ ++SG S
Sbjct: 265 VSFPTDMWSVGVIAYMLLSGLS 286
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTKE---FLTEIDMIWNIRHPNLVQLIG 57
+G GA+G V + G + AIK + S T L E+ ++ + HPN+++L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ N LV E L + ++ + K+ +D A I SG ++LH+
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVD---AAVIMKQVLSGTTYLHKH---N 124
Query: 118 IVHRDIKASNVLLDGNFHP---KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
IVHRD+K N+LL+ KI DFGL+ F V GT Y+APE L +
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKERLGTAYYIAPE-VLRKK 181
Query: 175 LTKKADVYSFGVLLLEIISG 194
+K DV+S GV+L ++ G
Sbjct: 182 YDEKCDVWSCGVILYILLCG 201
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 27/211 (12%)
Query: 1 MIGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTKEFLTEI--------DMIWNIR-HP 50
+IG G VV R R G + A+K + +++ + E L E+ ++ + HP
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP 160
Query: 51 NLVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFL 110
+++ LI + LV++ + L + L ++ V+L +I +SFL
Sbjct: 161 HIITLIDSYESSSFMFLVFDLMRKGELFDYL----TEKVALSEKETRSIMRSLLEAVSFL 216
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLA-KLFPDNVTHVSTRVAGTMGYLAPEY 169
H IVHRD+K N+LLD N ++ DFG + L P + GT GYLAPE
Sbjct: 217 HANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTPGYLAPEI 270
Query: 170 ALLGQ------LTKKADVYSFGVLLLEIISG 194
K+ D+++ GV+L +++G
Sbjct: 271 LKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAE---SKQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G G FG V+ G A+K L E +K +TE ++ N RHP L L
Sbjct: 15 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 74
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC-LGTASGLSFLHEEAD 115
+ V EY L L S+ + + + RA S L +LH
Sbjct: 75 YAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEE---RARFYGAEIVSALEYLHSRD- 128
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+V+RDIK N++LD + H KI DFGL K + + T GT YLAPE
Sbjct: 129 --VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLEDNDY 185
Query: 176 TKKADVYSFGVLLLEIISGR 195
+ D + GV++ E++ GR
Sbjct: 186 GRAVDWWGLGVVMYEMMCGR 205
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 23/226 (10%)
Query: 4 GGAFGVVYRGSLRDGTQIAIKCLSAESKQGTK---EFLTEIDMIWNIRHPNLVQLIGCCV 60
GG V LR +A+K L A+ + F E + HP +V +
Sbjct: 23 GGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGE 82
Query: 61 EDNNR----ILVYEYLENNSLANALLGSKSKYVSLDWPTRA-NICLGTASGLSFLHEEAD 115
+ +V EY++ +L + + P RA + L+F H+
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-----TPKRAIEVIADACQALNFSHQNG- 136
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA--GTMGYLAPEYALLG 173
I+HRD+K +N+++ K+ DFG+A+ D+ V+ A GT YL+PE A
Sbjct: 137 --IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 174 QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREE 219
+ ++DVYS G +L E+++G + F D + V + +RE+
Sbjct: 195 SVDARSDVYSLGCVLYEVLTG----EPPFTGDSPVSVAY-QHVRED 235
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 12/162 (7%)
Query: 48 RHPNLVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGL 107
+ P L QL C + V EY+ L + + P A GL
Sbjct: 79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI----QQVGRFKEPHAVFYAAEIAIGL 134
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNV-THVSTR-VAGTMGYL 165
FL + I++RD+K NV+LD H KI DFG+ K +N+ V+T+ GT Y+
Sbjct: 135 FFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYI 188
Query: 166 APEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDML 207
APE K D ++FGVLL E+++G++ + D++
Sbjct: 189 APEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF 230
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAE---SKQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G G FG V+ G A+K L E +K +TE ++ N RHP L L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC-LGTASGLSFLHEEAD 115
+ V EY L L S+ + + + RA S L +LH
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEE---RARFYGAEIVSALEYLHSRD- 125
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+V+RDIK N++LD + H KI DFGL K + + T GT YLAPE
Sbjct: 126 --VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLEDNDY 182
Query: 176 TKKADVYSFGVLLLEIISGR 195
+ D + GV++ E++ GR
Sbjct: 183 GRAVDWWGLGVVMYEMMCGR 202
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAE---SKQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G G FG V+ G A+K L E +K +TE ++ N RHP L L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC-LGTASGLSFLHEEAD 115
+ V EY L L S+ + + + RA S L +LH
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEE---RARFYGAEIVSALEYLHSRD- 125
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+V+RDIK N++LD + H KI DFGL K + + T GT YLAPE
Sbjct: 126 --VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLEDNDY 182
Query: 176 TKKADVYSFGVLLLEIISGR 195
+ D + GV++ E++ GR
Sbjct: 183 GRAVDWWGLGVVMYEMMCGR 202
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL---- 55
IG GA+G+V + ++AIK +S E + + L EI ++ RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFLHE 112
+E + + + L L L K++++S D +IC GL ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSND-----HICYFLYQILRGLKYIHS 146
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPEYA 170
++HRD+K SN+LL+ KI DFGLA++ + H T Y APE
Sbjct: 147 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 203
Query: 171 LLGQ-LTKKADVYSFGVLLLEIISGR 195
L + TK D++S G +L E++S R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSA-ESKQGTKEFLTEIDMIWNIRHPNLVQL---- 55
IG GA+G+V + ++AIK +S E + + L EI ++ RH N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFLHE 112
+E + + + L L L K++++S D +IC GL ++H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLL---KTQHLSND-----HICYFLYQILRGLKYIHS 147
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPEYA 170
++HRD+K SN+LL+ KI DFGLA++ + H T Y APE
Sbjct: 148 AN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 204
Query: 171 LLGQ-LTKKADVYSFGVLLLEIISGR 195
L + TK D++S G +L E++S R
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAE---SKQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G G FG V+ G A+K L E +K +TE ++ N RHP L L
Sbjct: 17 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 76
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC-LGTASGLSFLHEEAD 115
+ V EY L L S+ + + + RA S L +LH
Sbjct: 77 YAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEE---RARFYGAEIVSALEYLHSRD- 130
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVST--RVAGTMGYLAPEYALLG 173
+V+RDIK N++LD + H KI DFGL K + ++ +T GT YLAPE
Sbjct: 131 --VVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVLEDN 185
Query: 174 QLTKKADVYSFGVLLLEIISGR 195
+ D + GV++ E++ GR
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAE---SKQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G G FG V+ G A+K L E +K +TE ++ N RHP L L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC-LGTASGLSFLHEEAD 115
+ V EY L L S+ + + + RA S L +LH
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEE---RARFYGAEIVSALEYLHSRD- 125
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVST--RVAGTMGYLAPEYALLG 173
+V+RDIK N++LD + H KI DFGL K + ++ +T GT YLAPE
Sbjct: 126 --VVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 174 QLTKKADVYSFGVLLLEIISGR 195
+ D + GV++ E++ GR
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 35/208 (16%)
Query: 2 IGGGAFGVVYRGS-LRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLIGC 58
IG G F V + G ++AIK + T ++ E+ ++ + HPN+V+L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 59 CVEDNNRILVYEYLENNSLANALLG--------SKSKYVSLDWPTRANICLGTASGLSFL 110
+ L+ EY + + L+ ++SK+ + S + +
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI------------VSAVQYC 127
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
H++ IVHRD+KA N+LLD + + KI DFG + F V G+ Y APE
Sbjct: 128 HQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TVGGKLDTFCGSPPYAAPE-- 180
Query: 171 LLGQLTK----KADVYSFGVLLLEIISG 194
L Q K + DV+S GV+L ++SG
Sbjct: 181 -LFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 18/202 (8%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAE---SKQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G G FG V+ G A+K L E +K +TE ++ N RHP L L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC-LGTASGLSFLHEEAD 115
+ V EY L L S+ + + RA S L +LH
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHL--SRERVFT---EERARFYGAEIVSALEYLHSR-- 124
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVST--RVAGTMGYLAPEYALLG 173
+V+RDIK N++LD + H KI DFGL K + ++ +T GT YLAPE
Sbjct: 125 -DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 174 QLTKKADVYSFGVLLLEIISGR 195
+ D + GV++ E++ GR
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 1 MIGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCC 59
++G GAF V+ R G A+KC+ EI ++ I+H N+V L
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
+ LV + + L + +L + Y D + + S + +LHE IV
Sbjct: 76 ESTTHYYLVMQLVSGGELFDRIL-ERGVYTEKD---ASLVIQQVLSAVKYLHENG---IV 128
Query: 120 HRDIKASNVLL---DGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
HRD+K N+L + N I DFGL+K+ + + + GT GY+APE +
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM---STACGTPGYVAPEVLAQKPYS 185
Query: 177 KKADVYSFGVLLLEIISG 194
K D +S GV+ ++ G
Sbjct: 186 KAVDCWSIGVITYILLCG 203
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGCC 59
+G GA+G V R + +A+K + + E + EI + + H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
E N + L EY L + + + + P +G+ +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 126
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYALLGQL-TK 177
HRDIK N+LLD + KI DFGLA +F +N + ++ GT+ Y+APE + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 178 KADVYSFGVLLLEIISG 194
DV+S G++L +++G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCLSAE---SKQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G G FG V+ G A+K L E +K +TE ++ N RHP L L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANIC-LGTASGLSFLHEEAD 115
+ V EY L L S+ + + + RA S L +LH
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEE---RARFYGAEIVSALEYLHSRD- 125
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVST--RVAGTMGYLAPEYALLG 173
+V+RDIK N++LD + H KI DFGL K + ++ +T GT YLAPE
Sbjct: 126 --VVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 174 QLTKKADVYSFGVLLLEIISGR 195
+ D + GV++ E++ GR
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGCC 59
+G GA+G V R + +A+K + + E + EI + + H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
E N + L EY L + + + + P +G+ +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 126
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYALLGQL-TK 177
HRDIK N+LLD + KI DFGLA +F +N + ++ GT+ Y+APE + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 178 KADVYSFGVLLLEIISG 194
DV+S G++L +++G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 23/226 (10%)
Query: 4 GGAFGVVYRGSLRDGTQIAIKCLSAESKQGTK---EFLTEIDMIWNIRHPNLVQLIGCCV 60
GG V LR +A+K L A+ + F E + HP +V +
Sbjct: 23 GGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGE 82
Query: 61 EDNNR----ILVYEYLENNSLANALLGSKSKYVSLDWPTRA-NICLGTASGLSFLHEEAD 115
+ +V EY++ +L + + P RA + L+F H+
Sbjct: 83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-----TPKRAIEVIADACQALNFSHQNG- 136
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA--GTMGYLAPEYALLG 173
I+HRD+K +N+++ K+ DFG+A+ D+ V+ A GT YL+PE A
Sbjct: 137 --IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 174 QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREE 219
+ ++DVYS G +L E+++G + F D + V + +RE+
Sbjct: 195 SVDARSDVYSLGCVLYEVLTG----EPPFTGDSPVSVAY-QHVRED 235
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLI-- 56
+G GA+G V ++ G +IA+K LS +S K E+ ++ +++H N++ L+
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 57 ---GCCVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 119 FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 171
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 172 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 223
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L D++S G ++ E+++GR+
Sbjct: 224 LNWMHYNMTVDIWSVGCIMAELLTGRT 250
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGCC 59
+G GA+G V R + +A+K + + E + EI + + H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
E N + L EY L + + + + P +G+ +LH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 127
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYALLGQL-TK 177
HRDIK N+LLD + KI DFGLA +F +N + ++ GT+ Y+APE + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 187
Query: 178 KADVYSFGVLLLEIISG 194
DV+S G++L +++G
Sbjct: 188 PVDVWSCGIVLTAMLAG 204
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 16/199 (8%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAE---SKQGTKEFLTEIDMIWNIRHPNLVQLIG 57
+G G FG V G + G ++A+K L+ + S + EI + RHP++++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ +V EY+ L + + K+ ++ + S + + H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYI----CKHGRVEEMEARRLFQQILSAVDYCHRHM--- 131
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
+VHRD+K NVLLD + + KI DFGL+ + D ++ G+ Y APE + G+L
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPE-VISGRLYA 188
Query: 178 --KADVYSFGVLLLEIISG 194
+ D++S GV+L ++ G
Sbjct: 189 GPEVDIWSCGVILYALLCG 207
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 100/239 (41%), Gaps = 20/239 (8%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+G GAFGVV+R + G K ++ EI ++ + HP L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVH 120
+ +L+ E+L L + + K + N GL +HE + IVH
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAE---VINYMRQACEGLKHMHEHS---IVH 172
Query: 121 RDIKASNVLLDGNFHP--KIGDFGLA-KLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
DIK N++ + KI DFGLA KL PD + V+T T + APE +
Sbjct: 173 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVDREPVGF 229
Query: 178 KADVYSFGVLLLEIISGRSSSKAAFGDDMLILV---EWTWKLREEGRLLEIVDPELTQF 233
D+++ GVL ++SG S A DD+ L W+ E+ V PE F
Sbjct: 230 YTDMWAIGVLGYVLLSGLSP--FAGEDDLETLQNVKRCDWEFDEDA--FSSVSPEAKDF 284
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 48 RHPNLVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGL 107
+ P L QL C + V EY+ L + + P A GL
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI----QQVGRFKEPHAVFYAAEIAIGL 455
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKL-FPDNVTHVSTRVAGTMGYLA 166
FL + I++RD+K NV+LD H KI DFG+ K D VT + GT Y+A
Sbjct: 456 FFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIA 510
Query: 167 PEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDML 207
PE K D ++FGVLL E+++G++ + D++
Sbjct: 511 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF 551
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 2 IGGGAFGVVYRGSLRD---GTQIAIKCLSAESKQ-----GTKEFLTEIDMIWNIRHPNLV 53
IG GA+G VY+ RD G +A+K + + + T + + + HPN+V
Sbjct: 12 IGVGAYGTVYKA--RDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 54 QLIGCCVEDNNR-----ILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLS 108
+L+ C LV+E+++ + L L K+ L T ++ GL
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHVDQD-LRTYL--DKAPPPGLPAETIKDLMRQFLRGLD 126
Query: 109 FLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPE 168
FLH IVHRD+K N+L+ K+ DFGLA+++ + V T+ Y APE
Sbjct: 127 FLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALAPVVVTLWYRAPE 181
Query: 169 YALLGQLTKKADVYSFGVLLLEII 192
L D++S G + E+
Sbjct: 182 VLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 18/201 (8%)
Query: 4 GGAFGVVYRGSLRDGTQIAIKCLSAESKQGTK---EFLTEIDMIWNIRHPNLVQLIGCCV 60
GG V LR +A+K L A+ + F E + HP +V +
Sbjct: 40 GGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGE 99
Query: 61 EDNNR----ILVYEYLENNSLANALLGSKSKYVSLDWPTRA-NICLGTASGLSFLHEEAD 115
+ +V EY++ +L + + P RA + L+F H+
Sbjct: 100 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-----TPKRAIEVIADACQALNFSHQNG- 153
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVA--GTMGYLAPEYALLG 173
I+HRD+K +N+++ K+ DFG+A+ D+ V+ A GT YL+PE A
Sbjct: 154 --IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 211
Query: 174 QLTKKADVYSFGVLLLEIISG 194
+ ++DVYS G +L E+++G
Sbjct: 212 SVDARSDVYSLGCVLYEVLTG 232
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 96/220 (43%), Gaps = 37/220 (16%)
Query: 1 MIGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCC 59
+IG G FG V++ R DG I+ + +++ +E + + + H N+V GC
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIVHYNGCW 74
Query: 60 -------VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANI------------- 99
++ + +Y NS ++ +K ++ +++ + +
Sbjct: 75 DGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD 134
Query: 100 -------CLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT 152
G+ ++H + ++HRD+K SN+ L KIGDFGL ++
Sbjct: 135 KVLALELFEQITKGVDYIHSKK---LIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK 191
Query: 153 HVSTRVAGTMGYLAPEYALLGQLTKKADVYSFGVLLLEII 192
TR GT+ Y++PE K+ D+Y+ G++L E++
Sbjct: 192 R--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 2 IGGGAFGVVYRGSLRD---GTQIAIKCLSAESKQ-----GTKEFLTEIDMIWNIRHPNLV 53
IG GA+G VY+ RD G +A+K + + + T + + + HPN+V
Sbjct: 12 IGVGAYGTVYKA--RDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 54 QLIGCCVEDNNR-----ILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLS 108
+L+ C LV+E+++ + L L K+ L T ++ GL
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHVDQD-LRTYL--DKAPPPGLPAETIKDLMRQFLRGLD 126
Query: 109 FLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPE 168
FLH IVHRD+K N+L+ K+ DFGLA+++ + V T+ Y APE
Sbjct: 127 FLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALDPVVVTLWYRAPE 181
Query: 169 YALLGQLTKKADVYSFGVLLLEII 192
L D++S G + E+
Sbjct: 182 VLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 35/208 (16%)
Query: 2 IGGGAFGVVYRGS-LRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLIGC 58
IG G F V + G ++AIK + T ++ E+ ++ + HPN+V+L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 59 CVEDNNRILVYEYLENNSLANALLG--------SKSKYVSLDWPTRANICLGTASGLSFL 110
+ L+ EY + + L+ ++SK+ + S + +
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI------------VSAVQYC 130
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
H++ IVHRD+KA N+LLD + + KI DFG + F V G Y APE
Sbjct: 131 HQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TVGGKLDAFCGAPPYAAPE-- 183
Query: 171 LLGQLTK----KADVYSFGVLLLEIISG 194
L Q K + DV+S GV+L ++SG
Sbjct: 184 -LFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 2 IGGGAFGVVYRGSLRD---GTQIAIKCLSAESKQ-----GTKEFLTEIDMIWNIRHPNLV 53
IG GA+G VY+ RD G +A+K + + + T + + + HPN+V
Sbjct: 12 IGVGAYGTVYKA--RDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 54 QLIGCCVEDNNR-----ILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLS 108
+L+ C LV+E+++ + L L K+ L T ++ GL
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHVDQD-LRTYL--DKAPPPGLPAETIKDLMRQFLRGLD 126
Query: 109 FLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPE 168
FLH IVHRD+K N+L+ K+ DFGLA+++ + V T+ Y APE
Sbjct: 127 FLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV--TLWYRAPE 181
Query: 169 YALLGQLTKKADVYSFGVLLLEII 192
L D++S G + E+
Sbjct: 182 VLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 147
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 148 S-AD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 199
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-------LIYQILRGLKYIH 142
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 143 S-AD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 194
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 16/199 (8%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAE---SKQGTKEFLTEIDMIWNIRHPNLVQLIG 57
+G G FG V G + G ++A+K L+ + S + EI + RHP++++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ +V EY+ L + + K+ ++ + S + + H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYI----CKHGRVEEMEARRLFQQILSAVDYCHRHM--- 131
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
+VHRD+K NVLLD + + KI DFGL+ + D G+ Y APE + G+L
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRDSCGSPNYAAPE-VISGRLYA 188
Query: 178 --KADVYSFGVLLLEIISG 194
+ D++S GV+L ++ G
Sbjct: 189 GPEVDIWSCGVILYALLCG 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGCC 59
+G GA+G V R + +A+K + + E + EI + + H N+V+ G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
E N + L EY L + + + + P +G+ +LH I
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVVYLHGIG---IT 125
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYALLGQL-TK 177
HRDIK N+LLD + KI DFGLA +F +N + ++ GT+ Y+APE + +
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 185
Query: 178 KADVYSFGVLLLEIISG 194
DV+S G++L +++G
Sbjct: 186 PVDVWSCGIVLTAMLAG 202
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGCC 59
+G GA+G V R + +A+K + + E + EI + + H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
E N + L EY L + + + + P +G+ +LH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 127
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYALLGQL-TK 177
HRDIK N+LLD + KI DFGLA +F +N + ++ GT+ Y+APE + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 178 KADVYSFGVLLLEIISG 194
DV+S G++L +++G
Sbjct: 188 PVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGCC 59
+G GA+G V R + +A+K + + E + EI + + H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
E N + L EY L + + + + P +G+ +LH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 127
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYALLGQL-TK 177
HRDIK N+LLD + KI DFGLA +F +N + ++ GT+ Y+APE + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 178 KADVYSFGVLLLEIISG 194
DV+S G++L +++G
Sbjct: 188 PVDVWSCGIVLTAMLAG 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGCC 59
+G GA+G V R + +A+K + + E + EI + + H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
E N + L EY L + + + + P +G+ +LH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 127
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYALLGQL-TK 177
HRDIK N+LLD + KI DFGLA +F +N + ++ GT+ Y+APE + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 178 KADVYSFGVLLLEIISG 194
DV+S G++L +++G
Sbjct: 188 PVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGCC 59
+G GA+G V R + +A+K + + E + EI + + H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
E N + L EY L + + + + P +G+ +LH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 127
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYALLGQL-TK 177
HRDIK N+LLD + KI DFGLA +F +N + ++ GT+ Y+APE + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 178 KADVYSFGVLLLEIISG 194
DV+S G++L +++G
Sbjct: 188 PVDVWSCGIVLTAMLAG 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGCC 59
+G GA+G V R + +A+K + + E + EI + + H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
E N + L EY L + + + + P +G+ +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 126
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYALLGQL-TK 177
HRDIK N+LLD + KI DFGLA +F +N + ++ GT+ Y+APE + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 178 KADVYSFGVLLLEIISG 194
DV+S G++L +++G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGCC 59
+G GA+G V R + +A+K + + E + EI + + H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
E N + L EY L + + + + P +G+ +LH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 127
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYALLGQL-TK 177
HRDIK N+LLD + KI DFGLA +F +N + ++ GT+ Y+APE + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 178 KADVYSFGVLLLEIISG 194
DV+S G++L +++G
Sbjct: 188 PVDVWSCGIVLTAMLAG 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGCC 59
+G GA+G V R + +A+K + + E + EI + + H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
E N + L EY L + + + + P +G+ +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVVYLHGIG---IT 126
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYALLGQL-TK 177
HRDIK N+LLD + KI DFGLA +F +N + ++ GT+ Y+APE + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 178 KADVYSFGVLLLEIISG 194
DV+S G++L +++G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGCC 59
+G GA+G V R + +A+K + + E + EI + + H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
E N + L EY L + + + + P +G+ +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 126
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYALLGQL-TK 177
HRDIK N+LLD + KI DFGLA +F +N + ++ GT+ Y+APE + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 178 KADVYSFGVLLLEIISG 194
DV+S G++L +++G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGCC 59
+G GA+G V R + +A+K + + E + EI + + H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
E N + L EY L + + + + P +G+ +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 126
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYALLGQL-TK 177
HRDIK N+LLD + KI DFGLA +F +N + ++ GT+ Y+APE + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 178 KADVYSFGVLLLEIISG 194
DV+S G++L +++G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGCC 59
+G GA+G V R + +A+K + + E + EI + + H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
E N + L EY L + + + + P +G+ +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 126
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYALLGQL-TK 177
HRDIK N+LLD + KI DFGLA +F +N + ++ GT+ Y+APE + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 178 KADVYSFGVLLLEIISG 194
DV+S G++L +++G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 2 IGGGAFGVV---YRGSLRD--GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G G FG V L D G +A+K L ++F EI ++ + +V+
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 57 GCCVEDNNR--ILVYEYLENNSLANALLGSKSKY-VSLDWPTRANICLGTASGLSFLHEE 113
G LV EYL + L + L +++ S + IC G+ +L
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC----KGMEYLGSR 130
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAG--TMGYLAPEYAL 171
VHRD+ A N+L++ H KI DFGLAKL P + R G + + APE
Sbjct: 131 R---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLS 187
Query: 172 LGQLTKKADVYSFGVLLLEIIS--GRSSSKAA 201
++++DV+SFGV+L E+ + +S S +A
Sbjct: 188 DNIFSRQSDVWSFGVVLYELFTYCDKSCSPSA 219
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 153
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 154 S-AD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 205
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 206 LNWMHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGCC 59
+G GA+G V R + +A+K + + E + EI + + H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
E N + L EY L + + + + P +G+ +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 126
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYALLGQL-TK 177
HRDIK N+LLD + KI DFGLA +F +N + ++ GT+ Y+APE + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 178 KADVYSFGVLLLEIISG 194
DV+S G++L +++G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 16/199 (8%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+G G+F + + + Q A+K +S + T++ +T + + HPN+V+L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG--HPNIVKLHEVFH 76
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRAN-ICLGTASGLSFLHEEADPPIV 119
+ + LV E L L + K K+ S T A+ I S +S +H D +V
Sbjct: 77 DQLHTFLVMELLNGGELFERI--KKKKHFS---ETEASYIMRKLVSAVSHMH---DVGVV 128
Query: 120 HRDIKASNVLL---DGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
HRD+K N+L + N KI DFG A+L P + + T T+ Y APE
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNGYD 187
Query: 177 KKADVYSFGVLLLEIISGR 195
+ D++S GV+L ++SG+
Sbjct: 188 ESCDLWSLGVILYTMLSGQ 206
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 20/208 (9%)
Query: 1 MIGGGAFGVVY---RGSLRD-GTQIAIKCLS----AESKQGTKEFLTEIDMIWNIRH-PN 51
++G GA+G V+ + S D G A+K L + + T+ TE ++ +IR P
Sbjct: 61 VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120
Query: 52 LVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLG-TASGLSFL 110
LV L + L+ +Y+ L L + ++ + I +G L L
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGELFTHL-SQRERFTEHE----VQIYVGEIVLALEHL 175
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
H+ I++RDIK N+LLD N H + DFGL+K F + T + GT+ Y+AP+
Sbjct: 176 HKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIV 232
Query: 171 LLGQL--TKKADVYSFGVLLLEIISGRS 196
G K D +S GVL+ E+++G S
Sbjct: 233 RGGDSGHDKAVDWWSLGVLMYELLTGAS 260
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGCC 59
+G GA+G V R + +A+K + + E + EI + + H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
E N + L EY L + + + + P +G+ +LH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 127
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYALLGQL-TK 177
HRDIK N+LLD + KI DFGLA +F +N + ++ GT+ Y+APE + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 178 KADVYSFGVLLLEIISG 194
DV+S G++L +++G
Sbjct: 188 PVDVWSCGIVLTAMLAG 204
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 147
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 148 S-AD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 199
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGCC 59
+G GA+G V R + +A+K + + E + EI + + H N+V+ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
E N + L EY L + + + + P +G+ +LH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 127
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYALLGQL-TK 177
HRDIK N+LLD + KI DFGLA +F +N + ++ GT+ Y+APE + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 178 KADVYSFGVLLLEIISG 194
DV+S G++L +++G
Sbjct: 188 PVDVWSCGIVLTAMLAG 204
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 149
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 150 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIM 201
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGCC 59
+G GA+G V R + +A+K + + E + EI + + H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
E N + L EY L + + + + P +G+ +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 126
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYALLGQL-TK 177
HRDIK N+LLD + KI DFGLA +F +N + ++ GT+ Y+APE + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 178 KADVYSFGVLLLEIISG 194
DV+S G++L +++G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 149
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 150 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIM 201
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 103/205 (50%), Gaps = 23/205 (11%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE 113
+E+ N + + +L L N + K + + + GL ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIHS- 143
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYALL 172
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE L
Sbjct: 144 AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLN 196
Query: 173 G-QLTKKADVYSFGVLLLEIISGRS 196
+ D++S G ++ E+++GR+
Sbjct: 197 AMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGCC 59
+G GA+G V R + +A+K + + E + EI + + H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
E N + L EY L + + + + P +G+ +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 126
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYALLGQL-TK 177
HRDIK N+LLD + KI DFGLA +F +N + ++ GT+ Y+APE + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 178 KADVYSFGVLLLEIISG 194
DV+S G++L +++G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 11/197 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGCC 59
+G GA+G V R + +A+K + + E + EI + + H N+V+ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
E N + L EY L + + + + P +G+ +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 126
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYALLGQL-TK 177
HRDIK N+LLD + KI DFGLA +F +N + ++ GT+ Y+APE + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 178 KADVYSFGVLLLEIISG 194
DV+S G++L +++G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 149
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 150 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIM 201
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 154
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 155 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 206
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-------LIYQILRGLKYIH 142
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 143 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 194
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 97/218 (44%), Gaps = 21/218 (9%)
Query: 1 MIGGGAFGVVYRGSLR-DGTQIAIKCLSAES---KQGTKEFLTEIDMIW-NIRHPNLVQL 55
+IG G+FG V + + A+K L ++ K+ K ++E +++ N++HP LV L
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+ V +Y+ L L + P AS L +LH
Sbjct: 105 HFSFQTADKLYFVLDYINGGELFYHLQRERC----FLEPRARFYAAEIASALGYLHSLN- 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVST--RVAGTMGYLAPEYALLG 173
IV+RD+K N+LLD H + DFGL K +N+ H ST GT YLAPE
Sbjct: 160 --IVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPEYLAPEVLHKQ 214
Query: 174 QLTKKADVYSFGVLLLEIISG----RSSSKAAFGDDML 207
+ D + G +L E++ G S + A D++L
Sbjct: 215 PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL 252
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 142
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 143 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 194
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 142
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 143 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 194
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 142
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 143 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 194
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 142
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 143 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 194
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 153
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 154 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 205
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 206 LNWMHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 162
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 163 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 214
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 165
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 166 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 217
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 218 LNWMHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + +K +V + GL ++H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQF-------LIYQILRGLKYIH 138
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 139 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 190
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 148
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 149 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 200
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 147
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 148 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 199
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 141
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 142 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 193
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 194 LNWMHYNQTVDIWSVGCIMAELLTGRT 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 144
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 145 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 196
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 148
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 149 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 200
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 144
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 145 S-AD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 196
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 154
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 155 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 206
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 149
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 150 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 201
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 154
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 155 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 206
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 148
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 149 S-AD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 200
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 142
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 143 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 194
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 148
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 149 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 200
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 147
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 148 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 199
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 39/227 (17%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTKE-FLTEIDMIWNIRHPNLVQLIGCC 59
+G G FGVV+ + D AIK + +++ +E + E+ + + HP +V+
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 60 VEDNN---------RILVY--------EYLENNSLANALLGSKSKYVSLDWPTRANICLG 102
+E N ++ +Y E L++ + + + V L +I L
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL------HIFLQ 126
Query: 103 TASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-----------LFPDNV 151
A + FLH + ++HRD+K SN+ + K+GDFGL L P
Sbjct: 127 IAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 152 THVSTRVAGTMGYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSS 198
T GT Y++PE + K D++S G++L E++ S+
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQ 230
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 144
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 145 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 196
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 27/204 (13%)
Query: 2 IGGGAFGVVYRGS-LRDGTQIAIKCLSAE--SKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G F V + G ++A+K + + ++ E+ ++ + HPN+V+L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDW----PTRANICLGTASGLSFLHEEA 114
+ LV EY + + L V+ W RA S + + H++
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYL-------VAHGWMKEKEARAKF-RQIVSAVQYCHQKF 126
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
IVHRD+KA N+LLD + + KI DFG + F + G+ Y APE L Q
Sbjct: 127 ---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPE---LFQ 178
Query: 175 LTK----KADVYSFGVLLLEIISG 194
K + DV+S GV+L ++SG
Sbjct: 179 GKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 70/150 (46%), Gaps = 12/150 (8%)
Query: 49 HPNLVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLS 108
HP LV L C ++ V EY+ L + + A I L L+
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA----LN 167
Query: 109 FLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK--LFPDNVTHVSTRVAGTMGYLA 166
+LHE I++RD+K NVLLD H K+ D+G+ K L P + T + GT Y+A
Sbjct: 168 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIA 221
Query: 167 PEYALLGQLTKKADVYSFGVLLLEIISGRS 196
PE D ++ GVL+ E+++GRS
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRS 251
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 142
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 143 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 194
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 152
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 153 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 204
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 205 LNWMHYNQTVDIWSVGCIMAELLTGRT 231
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 161
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 162 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 213
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 214 LNWMHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 24/156 (15%)
Query: 49 HPNLVQLIGCCVEDNNRILVYEYLENNSL------ANALLGSKSKYVSLDWPTRANICLG 102
HP LV L C ++ V EY+ L L +++ S A I L
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS------AEISLA 133
Query: 103 TASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK--LFPDNVTHVSTRVAG 160
L++LHE I++RD+K NVLLD H K+ D+G+ K L P + T + G
Sbjct: 134 ----LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCG 183
Query: 161 TMGYLAPEYALLGQLTKKADVYSFGVLLLEIISGRS 196
T Y+APE D ++ GVL+ E+++GRS
Sbjct: 184 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 219
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 142
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 143 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 194
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 2 IGGGAFGVVYRGS-LRDGTQIAIKCLSAE--SKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G F V + G ++A+K + + ++ E+ ++ + HPN+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
+ LV EY + + L+ + RA S + + H++ I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR---MKEKEARAKF-RQIVSAVQYCHQKF---I 134
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK- 177
VHRD+KA N+LLD + + KI DFG + F + G+ Y APE L Q K
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPE---LFQGKKY 189
Query: 178 ---KADVYSFGVLLLEIISG 194
+ DV+S GV+L ++SG
Sbjct: 190 DGPEVDVWSLGVILYTLVSG 209
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 144
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 145 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 196
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 142
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 143 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 194
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 2 IGGGAFGVVYRGS-LRDGTQIAIKCLSAE--SKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G F V + G ++A+K + + ++ E+ ++ + HPN+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
+ LV EY + + L+ + RA S + + H++ I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR---MKEKEARAKF-RQIVSAVQYCHQKF---I 134
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK- 177
VHRD+KA N+LLD + + KI DFG + F + G+ Y APE L Q K
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPE---LFQGKKY 189
Query: 178 ---KADVYSFGVLLLEIISG 194
+ DV+S GV+L ++SG
Sbjct: 190 DGPEVDVWSLGVILYTLVSG 209
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 139
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 140 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 191
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 192 LNWMHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 24/156 (15%)
Query: 49 HPNLVQLIGCCVEDNNRILVYEYLENNSL------ANALLGSKSKYVSLDWPTRANICLG 102
HP LV L C ++ V EY+ L L +++ S A I L
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS------AEISLA 118
Query: 103 TASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK--LFPDNVTHVSTRVAG 160
L++LHE I++RD+K NVLLD H K+ D+G+ K L P + T + G
Sbjct: 119 ----LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCG 168
Query: 161 TMGYLAPEYALLGQLTKKADVYSFGVLLLEIISGRS 196
T Y+APE D ++ GVL+ E+++GRS
Sbjct: 169 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 204
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 1 MIGGGAFGVVYRGSLR--DGT--QIAIKCLSAE--SKQGTKEFLTEIDMIWNIRHPNLVQ 54
M+G G FG V L+ DG+ ++A+K L A+ + +EFL E + HP++ +
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 55 LIGCCVEDNNR------ILVYEYLENNSLANALLGSKSKYVSLDWP--TRANICLGTASG 106
L+G + + +++ ++++ L LL S+ + P T + A G
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149
Query: 107 LSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLA-KLFPDNVTHVSTRVAGTMGYL 165
+ +L +HRD+ A N +L + + DFGL+ K++ + + +L
Sbjct: 150 MEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWL 206
Query: 166 APEYALLGQLTKKADVYSFGVLLLEIIS 193
A E T +DV++FGV + EI++
Sbjct: 207 ALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 138
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 139 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 190
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 140
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 141 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 192
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLTGRT 219
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 162
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 163 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 214
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 138
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 139 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 190
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 161
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 162 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 213
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 214 LNWMHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 139
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T +V+TR Y APE
Sbjct: 140 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIM 191
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 192 LNWMHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 24/156 (15%)
Query: 49 HPNLVQLIGCCVEDNNRILVYEYLENNSL------ANALLGSKSKYVSLDWPTRANICLG 102
HP LV L C ++ V EY+ L L +++ S A I L
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS------AEISLA 122
Query: 103 TASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK--LFPDNVTHVSTRVAG 160
L++LHE I++RD+K NVLLD H K+ D+G+ K L P + T + G
Sbjct: 123 ----LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCG 172
Query: 161 TMGYLAPEYALLGQLTKKADVYSFGVLLLEIISGRS 196
T Y+APE D ++ GVL+ E+++GRS
Sbjct: 173 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 208
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 111/240 (46%), Gaps = 29/240 (12%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL----- 55
+G G G+V+ D ++AIK + Q K L EI +I + H N+V++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 56 ---------IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASG 106
+G E N+ +V EY+E + LAN L + L+ R G
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETD-LANVL----EQGPLLEEHARL-FMYQLLRG 132
Query: 107 LSFLHEEADPPIVHRDIKASNVLLDG-NFHPKIGDFGLAKLFPDNVTHVSTRVAG--TMG 163
L ++H ++HRD+K +N+ ++ + KIGDFGLA++ + +H G T
Sbjct: 133 LKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKW 189
Query: 164 YLAPEYALL-GQLTKKADVYSFGVLLLEIISGRSSSKAAFG-DDMLILVEWTWKLREEGR 221
Y +P L TK D+++ G + E+++G++ A + M +++E + EE R
Sbjct: 190 YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDR 249
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 14/198 (7%)
Query: 2 IGGGAFG-VVYRGSLRDGTQIAIKCLSAESKQGTKEFL-TEIDMIWNIRHPNLVQLIGCC 59
+G GAF VV G A+KC+ ++ +G + + EI ++ I+H N+V L
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIY 89
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
N+ LV + + L + ++ K Y D T L + +LH IV
Sbjct: 90 ESPNHLYLVMQLVSGGELFDRIV-EKGFYTEKDASTLIRQVL---DAVYYLHRMG---IV 142
Query: 120 HRDIKASNVLL---DGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
HRD+K N+L D I DFGL+K+ + V + GT GY+APE +
Sbjct: 143 HRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEVLAQKPYS 200
Query: 177 KKADVYSFGVLLLEIISG 194
K D +S GV+ ++ G
Sbjct: 201 KAVDCWSIGVIAYILLCG 218
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFG-VVYRGSLRDGTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
IG G+FG V+ + G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + K+ DFG AK V + + GT YLAPE L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCL--SAESKQGTKEFLTEIDMIWNIRHPNLV---QL 55
IG GA+GVV R G Q+AIK + + + K L E+ ++ + +H N++ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 56 IGCCVEDNNRILVYEYLE--NNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE 113
+ V VY L+ + L + S+ L GL ++H
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQP----LTLEHVRYFLYQLLRGLKYMHSA 177
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK---LFPDNVTHVSTRVAGTMGYLAPEYA 170
++HRD+K SN+L++ N KIGDFG+A+ P + T T Y APE
Sbjct: 178 Q---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 234
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L L + T+ D++S G + E+++ R
Sbjct: 235 LSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 77/168 (45%), Gaps = 23/168 (13%)
Query: 103 TASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF---PDNVTHVSTRVA 159
A G+ FL +HRD+ A N+LL N KI DFGLA+ PD V TR+
Sbjct: 208 VARGMEFLSSRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 160 GTMGYLAPEYALLGQLTKKADVYSFGVLLLEIIS-GRSSSKAAFGDDMLILVEWTWKLRE 218
+ ++APE + K+DV+S+GVLL EI S G S D+ ++ +LRE
Sbjct: 265 --LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDE-----DFCSRLRE 317
Query: 219 EGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEML 266
R+ + PE ++ L C RP ++VE L
Sbjct: 318 GMRM---------RAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 1 MIGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC- 58
+IG G FG V++ R DG IK + +++ +E + + + H N+V GC
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIVHYNGCW 73
Query: 59 ---------CVEDNNR------ILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGT 103
++++R + E+ + +L + K + LD +
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRGEKLDKVLALELFEQI 131
Query: 104 ASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMG 163
G+ ++H + +++RD+K SN+ L KIGDFGL ++ R GT+
Sbjct: 132 TKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR--XRSKGTLR 186
Query: 164 YLAPEYALLGQLTKKADVYSFGVLLLEII 192
Y++PE K+ D+Y+ G++L E++
Sbjct: 187 YMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFG-VVYRGSLRDGTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
IG G+FG V+ + G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + K+ DFG AK V + + GT YLAPE L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 2 IGGGAFGVVYRGS-LRDGTQIAIKCLSAE--SKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G F V + G ++A++ + + ++ E+ ++ + HPN+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
+ LV EY + + L+ + RA S + + H++ I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR---MKEKEARAKF-RQIVSAVQYCHQKF---I 134
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK- 177
VHRD+KA N+LLD + + KI DFG + F + G+ Y APE L Q K
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDEFCGSPPYAAPE---LFQGKKY 189
Query: 178 ---KADVYSFGVLLLEIISG 194
+ DV+S GV+L ++SG
Sbjct: 190 DGPEVDVWSLGVILYTLVSG 209
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 2 IGGGAFGVVYRGS-LRDGTQIAIKCLSAE--SKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G F V + G ++A+K + + ++ E+ ++ + HPN+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
+ LV EY + + L+ + RA S + + H++ I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR---MKEKEARAKF-RQIVSAVQYCHQKF---I 134
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK- 177
VHRD+KA N+LLD + + KI DFG + F + G Y APE L Q K
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDAFCGAPPYAAPE---LFQGKKY 189
Query: 178 ---KADVYSFGVLLLEIISG 194
+ DV+S GV+L ++SG
Sbjct: 190 DGPEVDVWSLGVILYTLVSG 209
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFG-VVYRGSLRDGTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
IG G+FG V+ + G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + K+ DFG AK V + + GT YLAPE L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCC 59
++G GAFG V + + D AIK + +++ L+E+ ++ ++ H +V+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 60 VEDNNRI-------------LVYEYLENNSLANALLGSKSKYVSLD--WPTRANICLGTA 104
+E N + + EY EN +L + L+ S++ D W I
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYD-LIHSENLNQQRDEYWRLFRQIL---- 126
Query: 105 SGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLA----------KLFPDNVTHV 154
LS++H + I+HRD+K N+ +D + + KIGDFGLA KL N+
Sbjct: 127 EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 155 S---TRVAGTMGYLAPEYAL-LGQLTKKADVYSFGVLLLEII 192
S T GT Y+A E G +K D+YS G++ E+I
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 105/205 (51%), Gaps = 23/205 (11%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE 113
+E+ N + + +L L N + KS+ ++ D + GL ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIV---KSQKLTDD--HVQFLIYQILRGLKYIHS- 143
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYAL- 171
AD I+HRD+K SN+ ++ + KI DFGL + D +T +V+TR Y APE L
Sbjct: 144 AD--IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----WYRAPEIMLN 196
Query: 172 LGQLTKKADVYSFGVLLLEIISGRS 196
+ D++S G ++ E+++GR+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCL--SAESKQGTKEFLTEIDMIWNIRHPNLV---QL 55
IG GA+GVV R G Q+AIK + + + K L E+ ++ + +H N++ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+ V VY L+ + S+ ++L+ GL ++H
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLE--HVRYFLYQLLRGLKYMHSAQ- 179
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAK---LFPDNVTHVSTRVAGTMGYLAPEYAL- 171
++HRD+K SN+L++ N KIGDFG+A+ P + T T Y APE L
Sbjct: 180 --VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLS 237
Query: 172 LGQLTKKADVYSFGVLLLEIISGR 195
L + T+ D++S G + E+++ R
Sbjct: 238 LHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCL--SAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V R G ++AIK L +S+ K E+ ++ ++RH N++ L+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
D ++ LG K+ L + GL ++H I
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG---I 149
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAG---TMGYLAPEYAL-LGQ 174
+HRD+K N+ ++ + KI DFGLA+ + + G T Y APE L +
Sbjct: 150 IHRDLKPGNLAVNEDCELKILDFGLAR-------QADSEMXGXVVTRWYRAPEVILNWMR 202
Query: 175 LTKKADVYSFGVLLLEIISGRSSSKAA 201
T+ D++S G ++ E+I+G++ K +
Sbjct: 203 YTQTVDIWSVGCIMAEMITGKTLFKGS 229
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCL--SAESKQGTKEFLT-EIDMIWNIRHPNLVQLIG 57
+G G FG VY + I A+K L S K+G + L EI++ ++ HPN+++L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ L+ EY L L K + D A I A L + H +
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKEL----QKSCTFDEQRTATIMEELADALMYCHGKK--- 143
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
++HRDIK N+LL KI DFG + P + + GT+ YL PE +
Sbjct: 144 VIHRDIKPENLLLGLKGELKIADFGWSVHAP---SLRRKTMCGTLDYLPPEMIEGRMHNE 200
Query: 178 KADVYSFGVLLLEIISGRSSSKAA 201
K D++ GVL E++ G ++A
Sbjct: 201 KVDLWCIGVLCYELLVGNPPFESA 224
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 114/258 (44%), Gaps = 34/258 (13%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIR-HPNLVQLIGC 58
++G GA+ V SL++G + A+K + ++ E++ ++ + + N+++LI
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEF 79
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
+D LV+E L+ S+ + K K+ + +R + A+ L FLH + I
Sbjct: 80 FEDDTRFYLVFEKLQGGSILAHI--QKQKHFNEREASR--VVRDVAAALDFLHTKG---I 132
Query: 119 VHRDIKASNVLLDG--NFHP-KIGDFGLAKLFPDN------VTHVSTRVAGTMGYLAPEY 169
HRD+K N+L + P KI DF L N T T G+ Y+APE
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEV 192
Query: 170 A--LLGQLT---KKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLRE-----E 219
Q T K+ D++S GV+L ++SG G D W E +
Sbjct: 193 VEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADC------GWDRGEVCRVCQ 246
Query: 220 GRLLEIVDPELTQFPEKE 237
+L E + +FP+K+
Sbjct: 247 NKLFESIQEGKYEFPDKD 264
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 2 IGGGAFGVVYRGS-LRDGTQIAIKCLSAE--SKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G F V + G ++A++ + + ++ E+ ++ + HPN+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
+ LV EY + + L+ + RA S + + H++ I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR---MKEKEARAKF-RQIVSAVQYCHQKF---I 134
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK- 177
VHRD+KA N+LLD + + KI DFG + F + G+ Y APE L Q K
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPE---LFQGKKY 189
Query: 178 ---KADVYSFGVLLLEIISG 194
+ DV+S GV+L ++SG
Sbjct: 190 DGPEVDVWSLGVILYTLVSG 209
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCL-----SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+IG G F VV R R+ G Q A+K + ++ T++ E + ++HP++V+
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L+ D +V+E+++ L ++ ++ L + H
Sbjct: 93 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH--- 149
Query: 115 DPPIVHRDIKASNVLLDG--NFHP-KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYAL 171
D I+HRD+K VLL N P K+G FG+A ++ RV GT ++APE
Sbjct: 150 DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHFMAPEVVK 208
Query: 172 LGQLTKKADVYSFGVLLLEIISG 194
K DV+ GV+L ++SG
Sbjct: 209 REPYGKPVDVWGCGVILFILLSG 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCL-----SAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
+IG G F VV R R+ G Q A+K + ++ T++ E + ++HP++V+
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L+ D +V+E+++ L ++ ++ L + H
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH--- 147
Query: 115 DPPIVHRDIKASNVLLDG--NFHP-KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYAL 171
D I+HRD+K VLL N P K+G FG+A ++ RV GT ++APE
Sbjct: 148 DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHFMAPEVVK 206
Query: 172 LGQLTKKADVYSFGVLLLEIISG 194
K DV+ GV+L ++SG
Sbjct: 207 REPYGKPVDVWGCGVILFILLSG 229
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 107/262 (40%), Gaps = 20/262 (7%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAES---KQGTKEFLTEIDMIWNIRHPN--LVQ 54
+IG G FG VY D G A+KCL + KQG L E M+ + + +
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 254
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWP-TRANICLGTASGLSFLHEE 113
+ +++ L N + L + D A I LG L +H
Sbjct: 255 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG----LEHMHNR 310
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG 173
+V+RD+K +N+LLD + H +I D GLA F H S GT GY+APE G
Sbjct: 311 F---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKG 364
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
AD +S G +L +++ G S + D + T + E L + PEL
Sbjct: 365 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE--LPDSFSPELRS 422
Query: 233 FPEKEVMRFIKVGLFCTQAGAH 254
E + R + L C GA
Sbjct: 423 LLEGLLQRDVNRRLGCLGRGAQ 444
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 142
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI D+GLA+ D +T +V+TR Y APE
Sbjct: 143 S-AD--IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----WYRAPEIM 194
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 107/262 (40%), Gaps = 20/262 (7%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAES---KQGTKEFLTEIDMIWNIRHPN--LVQ 54
+IG G FG VY D G A+KCL + KQG L E M+ + + +
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWP-TRANICLGTASGLSFLHEE 113
+ +++ L N + L + D A I LG L +H
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG----LEHMHNR 311
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG 173
+V+RD+K +N+LLD + H +I D GLA F H S GT GY+APE G
Sbjct: 312 F---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKG 365
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
AD +S G +L +++ G S + D + T + E L + PEL
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE--LPDSFSPELRS 423
Query: 233 FPEKEVMRFIKVGLFCTQAGAH 254
E + R + L C GA
Sbjct: 424 LLEGLLQRDVNRRLGCLGRGAQ 445
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCC 59
++G GAFG V + + D AIK + +++ L+E+ ++ ++ H +V+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 60 VEDNNRI-------------LVYEYLENNSLANALLGSKSKYVSLD--WPTRANICLGTA 104
+E N + + EY EN +L + L+ S++ D W I
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYD-LIHSENLNQQRDEYWRLFRQIL---- 126
Query: 105 SGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLA----------KLFPDNVTHV 154
LS++H + I+HRD+K N+ +D + + KIGDFGLA KL N+
Sbjct: 127 EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 155 S---TRVAGTMGYLAPEYAL-LGQLTKKADVYSFGVLLLEII 192
S T GT Y+A E G +K D+YS G++ E+I
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 142
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D +T V+TR Y APE
Sbjct: 143 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR-----WYRAPEIM 194
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLT-EIDMIWNIRHPNLVQLIGCC 59
+G GA G V R + +A+K + + E + EI + + H N+V+ G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
E N + L EY L + + + + P +G+ +LH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRI----EPDIGMPEPDAQRFFHQLMAGVVYLHGIG---IT 126
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFP-DNVTHVSTRVAGTMGYLAPEYALLGQL-TK 177
HRDIK N+LLD + KI DFGLA +F +N + ++ GT+ Y+APE + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 178 KADVYSFGVLLLEIISG 194
DV+S G++L +++G
Sbjct: 187 PVDVWSCGIVLTAMLAG 203
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 107/262 (40%), Gaps = 20/262 (7%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAES---KQGTKEFLTEIDMIWNIRHPN--LVQ 54
+IG G FG VY D G A+KCL + KQG L E M+ + + +
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWP-TRANICLGTASGLSFLHEE 113
+ +++ L N + L + D A I LG L +H
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG----LEHMHNR 311
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG 173
+V+RD+K +N+LLD + H +I D GLA F H S GT GY+APE G
Sbjct: 312 F---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKG 365
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
AD +S G +L +++ G S + D + T + E L + PEL
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE--LPDSFSPELRS 423
Query: 233 FPEKEVMRFIKVGLFCTQAGAH 254
E + R + L C GA
Sbjct: 424 LLEGLLQRDVNRRLGCLGRGAQ 445
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 107/262 (40%), Gaps = 20/262 (7%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAES---KQGTKEFLTEIDMIWNIRHPN--LVQ 54
+IG G FG VY D G A+KCL + KQG L E M+ + + +
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWP-TRANICLGTASGLSFLHEE 113
+ +++ L N + L + D A I LG L +H
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG----LEHMHNR 311
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG 173
+V+RD+K +N+LLD + H +I D GLA F H S GT GY+APE G
Sbjct: 312 F---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAPEVLQKG 365
Query: 174 -QLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQ 232
AD +S G +L +++ G S + D + T + E L + PEL
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE--LPDSFSPELRS 423
Query: 233 FPEKEVMRFIKVGLFCTQAGAH 254
E + R + L C GA
Sbjct: 424 LLEGLLQRDVNRRLGCLGRGAQ 445
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 1 MIGGGAFGVVYR----GSLRDGTQIAIKCLS----AESKQGTKEFLTEIDMIWNIRHPNL 52
++G G +G V++ G A+K L + + T E +++ ++HP +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 53 VQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTAS-GLSFLH 111
V LI L+ EYL L L + + A L S L LH
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQL-----EREGIFMEDTACFYLAEISMALGHLH 138
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK--LFPDNVTHVSTRVAGTMGYLAPEY 169
++ I++RD+K N++L+ H K+ DFGL K + VTH GT+ Y+APE
Sbjct: 139 QKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT---FCGTIEYMAPEI 192
Query: 170 ALLGQLTKKADVYSFGVLLLEIISG 194
+ + D +S G L+ ++++G
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 99 IC--LGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF---PDNVTH 153
IC A G+ FL A +HRD+ A N+LL KI DFGLA+ PD V
Sbjct: 194 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 250
Query: 154 VSTRVAGTMGYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWT 213
R+ + ++APE T ++DV+SFGVLL EI S +S D E+
Sbjct: 251 GDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFC 304
Query: 214 WKLREEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLN 273
+L+E R+ + P+ + L C RPT ++VE L + N
Sbjct: 305 RRLKEGTRM---------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 355
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 31/209 (14%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 142
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAG---TMGYLAPE 168
AD I+HRD+K SN+ ++ + KI DFGLA+ H +AG T Y APE
Sbjct: 143 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPE 192
Query: 169 YAL-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 99 IC--LGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF---PDNVTH 153
IC A G+ FL A +HRD+ A N+LL KI DFGLA+ PD V
Sbjct: 196 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 252
Query: 154 VSTRVAGTMGYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWT 213
R+ + ++APE T ++DV+SFGVLL EI S +S D E+
Sbjct: 253 GDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFC 306
Query: 214 WKLREEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLN 273
+L+E R+ + P+ + L C RPT ++VE L + N
Sbjct: 307 RRLKEGTRM---------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 31/209 (14%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 142
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAG---TMGYLAPE 168
AD I+HRD+K SN+ ++ + KI DFGLA+ H +AG T Y APE
Sbjct: 143 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPE 192
Query: 169 YAL-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 25/204 (12%)
Query: 2 IGGGAFGVVYRGS-LRDGTQIAIKCLSAESKQGTKEFLT---EIDMIWNIRHPNLVQLIG 57
+G G+FG V + + ++A+K +S + + + + EI + +RHP++++L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR---ANICLGTASGLSFLHEEA 114
+ ++V EY L + ++ + K ++ D R IC + + H
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIV--EKKRMTEDEGRRFFQQIIC-----AIEYCHRHK 128
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPD-NVTHVSTRVAGTMGYLAPEYALLG 173
IVHRD+K N+LLD N + KI DFGL+ + D N S G+ Y APE + G
Sbjct: 129 ---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPE-VING 181
Query: 174 QLTK--KADVYSFGVLLLEIISGR 195
+L + DV+S G++L ++ GR
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 99 IC--LGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF---PDNVTH 153
IC A G+ FL A +HRD+ A N+LL KI DFGLA+ PD V
Sbjct: 201 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 257
Query: 154 VSTRVAGTMGYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWT 213
R+ + ++APE T ++DV+SFGVLL EI S +S D E+
Sbjct: 258 GDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFC 311
Query: 214 WKLREEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLN 273
+L+E R+ + P+ + L C RPT ++VE L + N
Sbjct: 312 RRLKEGTRM---------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 362
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 99 IC--LGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF---PDNVTH 153
IC A G+ FL A +HRD+ A N+LL KI DFGLA+ PD V
Sbjct: 203 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 259
Query: 154 VSTRVAGTMGYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWT 213
R+ + ++APE T ++DV+SFGVLL EI S +S D E+
Sbjct: 260 GDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFC 313
Query: 214 WKLREEGRLLEIVDPELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSKDVHLN 273
+L+E R+ + P+ + L C RPT ++VE L + N
Sbjct: 314 RRLKEGTRM---------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 364
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 1 MIGGGAFGVVYR----GSLRDGTQIAIKCLS----AESKQGTKEFLTEIDMIWNIRHPNL 52
++G G +G V++ G A+K L + + T E +++ ++HP +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 53 VQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTAS-GLSFLH 111
V LI L+ EYL L L + + A L S L LH
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQL-----EREGIFMEDTACFYLAEISMALGHLH 138
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK--LFPDNVTHVSTRVAGTMGYLAPEY 169
++ I++RD+K N++L+ H K+ DFGL K + VTH GT+ Y+APE
Sbjct: 139 QKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHX---FCGTIEYMAPEI 192
Query: 170 ALLGQLTKKADVYSFGVLLLEIISG 194
+ + D +S G L+ ++++G
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFG-VVYRGSLRDGTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V+ + G A+K L + KE L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+++D + K+ DFGLAK V + + GT YLAPE L
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGLAK----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 94/213 (44%), Gaps = 19/213 (8%)
Query: 2 IGGGAFGVVYRGSLRDGTQ--IAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCC 59
+G GA +VYR + GTQ A+K L + K TEI ++ + HPN+++L
Sbjct: 61 LGRGATSIVYRCK-QKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPNIIKLKEIF 117
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
LV E + L + ++ K Y D A+ +++LHE IV
Sbjct: 118 ETPTEISLVLELVTGGELFDRIV-EKGYYSERD---AADAVKQILEAVAYLHENG---IV 170
Query: 120 HRDIKASNVLLDGNFHP----KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
HRD+K N LL P KI DFGL+K+ V + V GT GY APE
Sbjct: 171 HRDLKPEN-LLYATPAPDAPLKIADFGLSKIVEHQV--LMKTVCGTPGYCAPEILRGCAY 227
Query: 176 TKKADVYSFGVLLLEIISGRSSSKAAFGDDMLI 208
+ D++S G++ ++ G GD +
Sbjct: 228 GPEVDMWSVGIITYILLCGFEPFYDERGDQFMF 260
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 165
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D + +V+TR Y APE
Sbjct: 166 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----WYRAPEIM 217
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 218 LNWMHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 31/209 (14%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 138
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAG---TMGYLAPE 168
AD I+HRD+K SN+ ++ + KI DFGLA+ H +AG T Y APE
Sbjct: 139 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPE 188
Query: 169 YAL-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCLSAE---SKQGTKEFLTEIDMIWNIRHPNLVQLIG 57
IG G+FG V D ++ A+K ++ + + + E+ ++ + HP LV L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
++ + +V + L L L + V T L +L +
Sbjct: 83 SFQDEEDMFMVVDLL----LGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQR--- 135
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ--- 174
I+HRD+K N+LLD + H I DF +A + P T ++T +AGT Y+APE +
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-TQITT-MAGTKPYMAPEMFSSRKGAG 193
Query: 175 LTKKADVYSFGVLLLEIISGR 195
+ D +S GV E++ GR
Sbjct: 194 YSFAVDWWSLGVTAYELLRGR 214
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 2 IGGGAFGVVYRGS-LRDGTQIAIKCLSAE--SKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G F V + G ++A+K + + ++ E+ + + HPN+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
+ LV EY + + L+ + RA S + + H++ I
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGR---XKEKEARAKF-RQIVSAVQYCHQKF---I 134
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK- 177
VHRD+KA N+LLD + + KI DFG + F + G Y APE L Q K
Sbjct: 135 VHRDLKAENLLLDADXNIKIADFGFSNEF--TFGNKLDAFCGAPPYAAPE---LFQGKKY 189
Query: 178 ---KADVYSFGVLLLEIISG 194
+ DV+S GV+L ++SG
Sbjct: 190 DGPEVDVWSLGVILYTLVSG 209
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 1 MIGGGAFGVVYRGSLRDGTQI-AIKCLSAES---KQGTKEFLTEIDMIWNIRHPNLVQLI 56
+IG GAFG V + ++ A+K LS + + F E D++ P +VQL
Sbjct: 82 VIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 141
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKY-VSLDWPT--RANICLGTASGLSFLHEE 113
+D +V EY+ L N + S Y V W A + L L +H
Sbjct: 142 CAFQDDKYLYMVMEYMPGGDLVNLM----SNYDVPEKWAKFYTAEVVLA----LDAIHSM 193
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLA-KLFPDNVTHVSTRVAGTMGYLAPEYALL 172
++HRD+K N+LLD + H K+ DFG K+ + H T V GT Y++PE
Sbjct: 194 G---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYISPEVLKS 249
Query: 173 ----GQLTKKADVYSFGVLLLEIISGRS 196
G ++ D +S GV L E++ G +
Sbjct: 250 QGGDGYYGRECDWWSVGVFLFEMLVGDT 277
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCL----SAESKQGT--KEFLTEIDMIWNIRHPNLVQ 54
+G G F +V + + G + A K + S S++G +E E+ ++ + HPN++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + +L+ E + L + L ++ SL + G+++LH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 115 DPPIVHRDIKASNV-LLDGNF---HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I H D+K N+ LLD N H K+ DFGLA D V + + GT ++APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFVAPEIV 190
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRS 196
L +AD++S GV+ ++SG S
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGAS 216
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 12/197 (6%)
Query: 2 IGGGAFGVVYRGS-LRDGTQIAIKCLSAES-KQGTKEFLTEIDMIWNIRHPNLVQLIGCC 59
IG G F V + G +AIK + + TEI+ + N+RH ++ QL
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
N +V EY L + ++ L + S ++++H +
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDR----LSEEETRVVFRQIVSAVAYVHSQG---YA 130
Query: 120 HRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ--LTK 177
HRD+K N+L D K+ DFGL N + G++ Y APE + G+ L
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPE-LIQGKSYLGS 189
Query: 178 KADVYSFGVLLLEIISG 194
+ADV+S G+LL ++ G
Sbjct: 190 EADVWSMGILLYVLMCG 206
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 25/270 (9%)
Query: 2 IGGGAFGVVYR-GSLRDGTQIAIKCLSAE-SKQGTKEFLTEIDM-IWNIRHPNLVQLIGC 58
+G GA+GVV + + G +A+K + A + Q K L ++D+ + + P V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
+ + + E L + SL K ++ I + L LH + +
Sbjct: 119 LFREGDVWICME-LMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--V 175
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEY--ALLGQ-- 174
+HRD+K SNVL++ K+ DFG++ D+V T AG Y+APE L Q
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGISGYLVDSVA--KTIDAGCKPYMAPERINPELNQKG 233
Query: 175 LTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFP 234
+ K+D++S G+ ++E+ R F D W ++ +++E P+L
Sbjct: 234 YSVKSDIWSLGITMIELAILR------FPYD-----SWGTPFQQLKQVVEEPSPQLPA-- 280
Query: 235 EKEVMRFIKVGLFCTQAGAHYRPTMKQVVE 264
+K F+ C + + RPT ++++
Sbjct: 281 DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 39/222 (17%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCC 59
++G GAFG V + + D AIK + +++ L+E+ ++ ++ H +V+
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLNHQYVVRYYAAW 71
Query: 60 VEDNNRI-------------LVYEYLENNSLANALLGSKSKYVSLD--WPTRANICLGTA 104
+E N + + EY EN +L + L+ S++ D W I
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYD-LIHSENLNQQRDEYWRLFRQIL---- 126
Query: 105 SGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLA----------KLFPDNVTHV 154
LS++H + I+HR++K N+ +D + + KIGDFGLA KL N+
Sbjct: 127 EALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 155 S---TRVAGTMGYLAPEYAL-LGQLTKKADVYSFGVLLLEII 192
S T GT Y+A E G +K D YS G++ E I
Sbjct: 184 SDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIK-----CLSAESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+G G+FG V G ++A+K L+ QG E EI + +RHP++++L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 69
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+ I+V EY N L + + S + + H
Sbjct: 70 YDVIKSKDEIIMVIEYA-----GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK- 123
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPD-NVTHVSTRVAGTMGYLAPEYALLGQ 174
IVHRD+K N+LLD + + KI DFGL+ + D N S G+ Y APE + G+
Sbjct: 124 --IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPE-VISGK 177
Query: 175 LTK--KADVYSFGVLLLEIISGR 195
L + DV+S GV+L ++ R
Sbjct: 178 LYAGPEVDVWSCGVILYVMLCRR 200
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 142
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DF LA+ D +T +V+TR Y APE
Sbjct: 143 S-AD--IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----WYRAPEIM 194
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIK-----CLSAESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+G G+FG V G ++A+K L+ QG E EI + +RHP++++L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 79
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+ I+V EY N L + + S + + H
Sbjct: 80 YDVIKSKDEIIMVIEYA-----GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK- 133
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPD-NVTHVSTRVAGTMGYLAPEYALLGQ 174
IVHRD+K N+LLD + + KI DFGL+ + D N S G+ Y APE + G+
Sbjct: 134 --IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPE-VISGK 187
Query: 175 LTK--KADVYSFGVLLLEIISGR 195
L + DV+S GV+L ++ R
Sbjct: 188 LYAGPEVDVWSCGVILYVMLCRR 210
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 17/200 (8%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAE--SKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GAF VV R + G + A K ++ + S + ++ E + ++HPN+V+L
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTA-SGLSFLHEEADPP 117
E++ LV++ + L ++ ++ Y D A+ C+ +++ H
Sbjct: 73 IQEESFHYLVFDLVTGGELFEDIV-AREFYSEAD----ASHCIQQILESIAYCHSNG--- 124
Query: 118 IVHRDIKASNVLLDGNFH---PKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
IVHR++K N+LL K+ DFGLA N + AGT GYL+PE
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDP 182
Query: 175 LTKKADVYSFGVLLLEIISG 194
+K D+++ GV+L ++ G
Sbjct: 183 YSKPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 17/200 (8%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAE--SKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GAF VV R + G + A K ++ + S + ++ E + ++HPN+V+L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTA-SGLSFLHEEADPP 117
E++ LV++ + L ++ ++ Y D A+ C+ +++ H
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIV-AREFYSEAD----ASHCIQQILESIAYCHSNG--- 125
Query: 118 IVHRDIKASNVLLDGNFH---PKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
IVHR++K N+LL K+ DFGLA N + AGT GYL+PE
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 175 LTKKADVYSFGVLLLEIISG 194
+K D+++ GV+L ++ G
Sbjct: 184 YSKPVDIWACGVILYILLVG 203
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 22/202 (10%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +G V++ R+ +I A+K L + + L EI ++ ++H N+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVS-----LDWPTRANICLGTASGLSFLHEE 113
D LV+E+ + + KY LD + GL F H
Sbjct: 70 LHSDKKLTLVFEFCDQDL---------KKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG 173
++HRD+K N+L++ N K+ DFGLA+ F V S V T+ Y P+
Sbjct: 121 N---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGA 176
Query: 174 QL-TKKADVYSFGVLLLEIISG 194
+L + D++S G + E+ +
Sbjct: 177 KLYSTSIDMWSAGCIFAELANA 198
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 142
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI FGLA+ D +T +V+TR Y APE
Sbjct: 143 S-AD--IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----WYRAPEIM 194
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIK-----CLSAESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+G G+FG V G ++A+K L+ QG E EI + +RHP++++L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 78
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+ I+V EY N L + + S + + H
Sbjct: 79 YDVIKSKDEIIMVIEYA-----GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK- 132
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPD-NVTHVSTRVAGTMGYLAPEYALLGQ 174
IVHRD+K N+LLD + + KI DFGL+ + D N S G+ Y APE + G+
Sbjct: 133 --IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPE-VISGK 186
Query: 175 LTK--KADVYSFGVLLLEIISGR 195
L + DV+S GV+L ++ R
Sbjct: 187 LYAGPEVDVWSCGVILYVMLCRR 209
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIK-----CLSAESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+G G+FG V G ++A+K L+ QG E EI + +RHP++++L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 73
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+ I+V EY N L + + S + + H
Sbjct: 74 YDVIKSKDEIIMVIEYA-----GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK- 127
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPD-NVTHVSTRVAGTMGYLAPEYALLGQ 174
IVHRD+K N+LLD + + KI DFGL+ + D N S G+ Y APE + G+
Sbjct: 128 --IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPE-VISGK 181
Query: 175 LTK--KADVYSFGVLLLEIISGR 195
L + DV+S GV+L ++ R
Sbjct: 182 LYAGPEVDVWSCGVILYVMLCRR 204
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFG-VVYRGSLRDGTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V+ + G A+K L + KE L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+++D + ++ DFGLAK V + + GT YLAPE L
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGLAK----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 142
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI D GLA+ D +T +V+TR Y APE
Sbjct: 143 S-AD--IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----WYRAPEIM 194
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 17/200 (8%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAE--SKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GAF VV R + G + A K ++ + S + ++ E + ++HPN+V+L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTA-SGLSFLHEEADPP 117
E++ LV++ + L ++ ++ Y D A+ C+ +++ H
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIV-AREFYSEAD----ASHCIQQILESIAYCHSNG--- 125
Query: 118 IVHRDIKASNVLLDGNFH---PKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
IVHR++K N+LL K+ DFGLA N + AGT GYL+PE
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 175 LTKKADVYSFGVLLLEIISG 194
+K D+++ GV+L ++ G
Sbjct: 184 YSKPVDIWACGVILYILLVG 203
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 142
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI D GLA+ D +T +V+TR Y APE
Sbjct: 143 S-AD--IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----WYRAPEIM 194
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + +AGT YLAPE L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLAGTPEYLAPEIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 17/200 (8%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAE--SKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GAF VV R + G + A K ++ + S + ++ E + ++HPN+V+L
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTA-SGLSFLHEEADPP 117
E++ LV++ + L ++ ++ Y D A+ C+ +++ H
Sbjct: 97 IQEESFHYLVFDLVTGGELFEDIV-AREFYSEAD----ASHCIQQILESIAYCHSNG--- 148
Query: 118 IVHRDIKASNVLLDGNFHP---KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
IVHR++K N+LL K+ DFGLA N + AGT GYL+PE
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDP 206
Query: 175 LTKKADVYSFGVLLLEIISG 194
+K D+++ GV+L ++ G
Sbjct: 207 YSKPVDIWACGVILYILLVG 226
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 162
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI DFGLA+ D + V+TR Y APE
Sbjct: 163 S-AD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-----WYRAPEIM 214
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G GA+G V Y LR ++A+K LS +S + E+ ++ +++H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 57 -----GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLH 111
+ED + + + L L N + KS+ +S + + GL ++H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIV---KSQALSDE--HVQFLVYQLLRGLKYIH 148
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
I+HRD+K SNV ++ + +I DFGLA+ + +T +V+TR Y APE
Sbjct: 149 SAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIM 200
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E++ G++
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFG-VVYRGSLRDGTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V+ + G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 28/244 (11%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKC--LSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G +G V++ R+ +I A+K L + + L EI ++ ++H N+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVS-----LDWPTRANICLGTASGLSFLHEE 113
D LV+E+ + + KY LD + GL F H
Sbjct: 70 LHSDKKLTLVFEFCDQDL---------KKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG 173
++HRD+K N+L++ N K+ +FGLA+ F V S V T+ Y P+
Sbjct: 121 N---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGA 176
Query: 174 QL-TKKADVYSFGVLLLEII-SGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELT 231
+L + D++S G + E+ +GR DD L + R G E P +T
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRI-----FRLLGTPTEEQWPSMT 231
Query: 232 QFPE 235
+ P+
Sbjct: 232 KLPD 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFG-VVYRGSLRDGTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V+ + G A+K L + K+ L E ++ + P LV+L
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 145
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 146 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLAPEIILSKGY 201
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 202 NKAVDWWALGVLIYEMAAG 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G GA+G V Y LR ++A+K LS +S + E+ ++ +++H N++ L+
Sbjct: 28 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 57 -----GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLH 111
+ED + + + +L A L + K +L + GL ++H
Sbjct: 86 DVFTPATSIEDFSEVYLV-----TTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH 140
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
I+HRD+K SNV ++ + +I DFGLA+ + +T +V+TR Y APE
Sbjct: 141 SAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WYRAPEIM 192
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E++ G++
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLQGKA 219
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFG-VVYRGSLRDGTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V+ + G A+K L + K+ L E ++ + P LV+L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 160
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
+G GA+G V Y LR ++A+K LS +S + E+ ++ +++H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 57 -----GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLH 111
+ED + + + +L A L + K +L + GL ++H
Sbjct: 94 DVFTPATSIEDFSEVYLV-----TTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH 148
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
I+HRD+K SNV ++ + +I DFGLA+ + +T +V+TR Y APE
Sbjct: 149 SAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIM 200
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E++ G++
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 27/207 (13%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V + G ++A+K LS +S K E+ ++ +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 59 -----CVEDNNRILVYEYLENNSLANALLGSK--SKYVSLDWPTRANICLGTASGLSFLH 111
+E+ N + + +L L N + K +V + GL ++H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILRGLKYIH 142
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVT-HVSTRVAGTMGYLAPEYA 170
AD I+HRD+K SN+ ++ + KI D GLA+ D +T +V+TR Y APE
Sbjct: 143 S-AD--IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----WYRAPEIM 194
Query: 171 L-LGQLTKKADVYSFGVLLLEIISGRS 196
L + D++S G ++ E+++GR+
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFG-VVYRGSLRDGTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V+ + G A+K L + K+ L E ++ + P LV+L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 160
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLAPEIILSKGY 216
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 12/199 (6%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAES---KQGTKEFL-TEIDMIWNIRHPNLVQLI 56
+G G F Y + D ++ + +S K KE + TEI + ++ +P++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
G +D+ +V E SL L + K V+ P T G+ +LH
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLE--LHKRRKAVT--EPEARYFMRQTIQGVQYLHNNR-- 162
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRD+K N+ L+ + KIGDFGLA + T + GT Y+APE +
Sbjct: 163 -VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAPEVLCKKGHS 220
Query: 177 KKADVYSFGVLLLEIISGR 195
+ D++S G +L ++ G+
Sbjct: 221 FEVDIWSLGCILYTLLVGK 239
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFG-VVYRGSLRDGTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V+ + G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFG-VVYRGSLRDGTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V+ + G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 87/198 (43%), Gaps = 16/198 (8%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G FGV + ++ ++ + EI ++RHPN+V+ +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGT-ASGLSFLHEEADPPIVH 120
+ +V EY L + + S D A SG+S+ H + H
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGR--FSED---EARFFFQQLISGVSYAHAMQ---VAH 138
Query: 121 RDIKASNVLLDGNFHP--KIGDFGLAKLFPDNVTHVSTRVA-GTMGYLAPEYALLGQLTK 177
RD+K N LLDG+ P KI DFG +K +V H + A GT Y+APE L +
Sbjct: 139 RDLKLENTLLDGSPAPRLKIADFGYSKA---SVLHSQPKSAVGTPAYIAPEVLLKKEYDG 195
Query: 178 K-ADVYSFGVLLLEIISG 194
K ADV+S GV L ++ G
Sbjct: 196 KVADVWSCGVTLYVMLVG 213
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFG-VVYRGSLRDGTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V+ + G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 19/178 (10%)
Query: 26 LSAESKQGTKE-FLTEIDMIWNIR-HPNLVQLIGCCVEDNNRILVYEYLENNSLANALLG 83
SAE Q +E L E+D++ + HPN++QL + LV++ ++ L + L
Sbjct: 58 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-- 115
Query: 84 SKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGL 143
++ V+L I + LH+ IVHRD+K N+LLD + + K+ DFG
Sbjct: 116 --TEKVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGF 170
Query: 144 A-KLFPDNVTHVSTRVAGTMGYLAPEYALLGQ------LTKKADVYSFGVLLLEIISG 194
+ +L P V GT YLAPE K+ D++S GV++ +++G
Sbjct: 171 SCQLDPGEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 2 IGGGAFGVVYRGSLRDGTQ------IAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+G GAF VV R + TQ I K LSA Q + E + ++HPN+V+L
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER---EARICRLLKHPNIVRL 95
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTA-SGLSFLHEEA 114
E+ LV++ + L ++ ++ Y D A+ C+ ++ +H+
Sbjct: 96 HDSISEEGFHYLVFDLVTGGELFEDIV-AREYYSEAD----ASHCIHQILESVNHIHQH- 149
Query: 115 DPPIVHRDIKASNVLLDGNFH---PKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYAL 171
IVHRD+K N+LL K+ DFGLA + AGT GYL+PE
Sbjct: 150 --DIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYLSPEVLR 206
Query: 172 LGQLTKKADVYSFGVLLLEIISG 194
K D+++ GV+L ++ G
Sbjct: 207 KDPYGKPVDIWACGVILYILLVG 229
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 19/199 (9%)
Query: 2 IGGGAFG-VVYRGSLRDGTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V+ + G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+++D + K+ DFG AK V + + GT YLAPE L
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 19/178 (10%)
Query: 26 LSAESKQGTKE-FLTEIDMIWNIR-HPNLVQLIGCCVEDNNRILVYEYLENNSLANALLG 83
SAE Q +E L E+D++ + HPN++QL + LV++ ++ L + L
Sbjct: 45 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-- 102
Query: 84 SKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGL 143
++ V+L I + LH+ IVHRD+K N+LLD + + K+ DFG
Sbjct: 103 --TEKVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGF 157
Query: 144 A-KLFPDNVTHVSTRVAGTMGYLAPEYALLGQ------LTKKADVYSFGVLLLEIISG 194
+ +L P V GT YLAPE K+ D++S GV++ +++G
Sbjct: 158 SCQLDPGEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 19/178 (10%)
Query: 26 LSAESKQGTKE-FLTEIDMIWNIR-HPNLVQLIGCCVEDNNRILVYEYLENNSLANALLG 83
SAE Q +E L E+D++ + HPN++QL + LV++ ++ L + L
Sbjct: 58 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-- 115
Query: 84 SKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGL 143
++ V+L I + LH+ IVHRD+K N+LLD + + K+ DFG
Sbjct: 116 --TEKVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGF 170
Query: 144 A-KLFPDNVTHVSTRVAGTMGYLAPEYALLGQ------LTKKADVYSFGVLLLEIISG 194
+ +L P V GT YLAPE K+ D++S GV++ +++G
Sbjct: 171 SCQLDPGEKLR---SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 180
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGATWTLCGTPEYLAPEIILSKGY 236
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 237 NKAVDWWALGVLIYEMAAG 255
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 15/197 (7%)
Query: 2 IGGGAFG-VVYRGSLRDGTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V+ + G A+K L + K+ L E ++ + P LV+L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+++N +V EY+ + + L + P +LH
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH---SLD 162
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L K
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 178 KADVYSFGVLLLEIISG 194
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 25/270 (9%)
Query: 2 IGGGAFGVVYR-GSLRDGTQIAIKCLSAE-SKQGTKEFLTEIDM-IWNIRHPNLVQLIGC 58
+G GA+GVV + + G +A+K + A + Q K L ++D+ + + P V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
+ + + E L + SL K ++ I + L LH + +
Sbjct: 75 LFREGDVWICME-LMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--V 131
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEY--ALLGQ-- 174
+HRD+K SNVL++ K+ DFG++ D+V AG Y+APE L Q
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID--AGCKPYMAPERINPELNQKG 189
Query: 175 LTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFP 234
+ K+D++S G+ ++E+ R F D W ++ +++E P+L
Sbjct: 190 YSVKSDIWSLGITMIELAILR------FPYD-----SWGTPFQQLKQVVEEPSPQLPA-- 236
Query: 235 EKEVMRFIKVGLFCTQAGAHYRPTMKQVVE 264
+K F+ C + + RPT ++++
Sbjct: 237 DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 15/197 (7%)
Query: 2 IGGGAFG-VVYRGSLRDGTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V+ + G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+++N +V EY+ + + L + P +LH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH---SLD 161
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L K
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 178 KADVYSFGVLLLEIISG 194
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 15/197 (7%)
Query: 2 IGGGAFG-VVYRGSLRDGTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V+ + G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+++N +V EY+ + + L + P +LH
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH---SLD 161
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L K
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 178 KADVYSFGVLLLEIISG 194
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIK-CLSAESKQGTK-EFLTEIDMIWNIRHPNLVQLIGC 58
IG G FG V++ R G ++A+K L K+G L EI ++ ++H N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 59 C---VEDNNRI-----LVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFL 110
C NR LV+++ E++ LA L K+ + + L +GL ++
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHD-LAGLLSNVLVKFTLSEIKRVMQMLL---NGLYYI 141
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAG---TMGYLAP 167
H I+HRD+KA+NVL+ + K+ DFGLA+ F R T+ Y P
Sbjct: 142 HRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 168 EYALLGQ--LTKKADVYSFGVLLLEI 191
E LLG+ D++ G ++ E+
Sbjct: 199 EL-LLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIK-CLSAESKQGTK-EFLTEIDMIWNIRHPNLVQLIGC 58
IG G FG V++ R G ++A+K L K+G L EI ++ ++H N+V LI
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 59 C---VEDNNRI-----LVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFL 110
C NR LV+++ E++ LA L K+ + + L +GL ++
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHD-LAGLLSNVLVKFTLSEIKRVMQMLL---NGLYYI 140
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAG---TMGYLAP 167
H I+HRD+KA+NVL+ + K+ DFGLA+ F R T+ Y P
Sbjct: 141 HRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 197
Query: 168 EYALLGQ--LTKKADVYSFGVLLLEI 191
E LLG+ D++ G ++ E+
Sbjct: 198 E-LLLGERDYGPPIDLWGAGCIMAEM 222
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 15/197 (7%)
Query: 2 IGGGAFG-VVYRGSLRDGTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V+ + G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+++N +V EY + + L + P +LH
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH---SLD 161
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
+++RD+K N+++D + K+ DFG AK V + + GT YLAPE L K
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 178 KADVYSFGVLLLEIISG 194
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 160
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 152
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 208
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 209 NKAVDWWALGVLIYEMAAG 227
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 110 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 160
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 95
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 96 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 146
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 147 LDLIYRDLKPENLLIDEQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 202
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 203 NKAVDWWALGVLIYEMAAG 221
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 16 RDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVEDNNRILVYEYLENN 75
RD T+ +S +SK +F E+ +I +I++ + G + ++YEY+EN+
Sbjct: 71 RDFTKSNNDKISIKSKYD--DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMEND 128
Query: 76 SLA--NALLGSKSKYVSLDWPTRANICL--GTASGLSFLHEEADPPIVHRDIKASNVLLD 131
S+ + K + P + C+ + S++H E + I HRD+K SN+L+D
Sbjct: 129 SILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMD 186
Query: 132 GNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK--KADVYSFGVLL 188
N K+ DFG ++ D S GT ++ PE+ K D++S G+ L
Sbjct: 187 KNGRVKLSDFGESEYMVDKKIKGS---RGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 160
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLXGTPEYLAPEIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 14/200 (7%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAES---KQGTKEFL-TEIDMIWNIRHPNLVQLI 56
+G G F Y + D ++ + +S K KE + TEI + ++ +P++V
Sbjct: 33 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 92
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
G +D+ +V E SL L + K V+ P T G+ +LH
Sbjct: 93 GFFEDDDFVYVVLEICRRRSLLE--LHKRRKAVT--EPEARYFMRQTIQGVQYLHNNR-- 146
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLA-KLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
++HRD+K N+ L+ + KIGDFGLA K+ D + GT Y+APE
Sbjct: 147 -VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKDLCGTPNYIAPEVLCKKGH 203
Query: 176 TKKADVYSFGVLLLEIISGR 195
+ + D++S G +L ++ G+
Sbjct: 204 SFEVDIWSLGCILYTLLVGK 223
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIK-CLSAESKQGTK-EFLTEIDMIWNIRHPNLVQLIGC 58
IG G FG V++ R G ++A+K L K+G L EI ++ ++H N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 59 C---VEDNNRI-----LVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFL 110
C NR LV+++ E++ LA L K+ + + L +GL ++
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHD-LAGLLSNVLVKFTLSEIKRVMQMLL---NGLYYI 141
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAG---TMGYLAP 167
H I+HRD+KA+NVL+ + K+ DFGLA+ F R T+ Y P
Sbjct: 142 HRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 168 EYALLGQ--LTKKADVYSFGVLLLEI 191
E LLG+ D++ G ++ E+
Sbjct: 199 EL-LLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 160
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIK-CLSAESKQGTK-EFLTEIDMIWNIRHPNLVQLIGC 58
IG G FG V++ R G ++A+K L K+G L EI ++ ++H N+V LI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 59 C---VEDNNRI-----LVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFL 110
C NR LV+++ E++ LA L K+ + + L +GL ++
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHD-LAGLLSNVLVKFTLSEIKRVMQMLL---NGLYYI 141
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAG---TMGYLAP 167
H I+HRD+KA+NVL+ + K+ DFGLA+ F R T+ Y P
Sbjct: 142 HRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 168 EYALLGQ--LTKKADVYSFGVLLLEI 191
E LLG+ D++ G ++ E+
Sbjct: 199 EL-LLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 14/200 (7%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAES---KQGTKEFL-TEIDMIWNIRHPNLVQLI 56
+G G F Y + D ++ + +S K KE + TEI + ++ +P++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
G +D+ +V E SL L + K V+ P T G+ +LH
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLE--LHKRRKAVT--EPEARYFMRQTIQGVQYLHNNR-- 162
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLA-KLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
++HRD+K N+ L+ + KIGDFGLA K+ D + GT Y+APE
Sbjct: 163 -VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKXLCGTPNYIAPEVLCKKGH 219
Query: 176 TKKADVYSFGVLLLEIISGR 195
+ + D++S G +L ++ G+
Sbjct: 220 SFEVDIWSLGCILYTLLVGK 239
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 130 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 180
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 236
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 237 NKAVDWWALGVLIYEMAAG 255
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 14/200 (7%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAES---KQGTKEFL-TEIDMIWNIRHPNLVQLI 56
+G G F Y + D ++ + +S K KE + TEI + ++ +P++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
G +D+ +V E SL L + K V+ P T G+ +LH
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLE--LHKRRKAVT--EPEARYFMRQTIQGVQYLHNNR-- 162
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLA-KLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
++HRD+K N+ L+ + KIGDFGLA K+ D + GT Y+APE
Sbjct: 163 -VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKDLCGTPNYIAPEVLCKKGH 219
Query: 176 TKKADVYSFGVLLLEIISGR 195
+ + D++S G +L ++ G+
Sbjct: 220 SFEVDIWSLGCILYTLLVGK 239
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 19/199 (9%)
Query: 2 IGGGAFG-VVYRGSLRDGTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V+ + G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+++D + ++ DFG AK V + + GT YLAPE L
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY + + L +G S+ P +LH
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 160
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+++D + K+ DFG AK V + + GT YLAPE L
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 30/222 (13%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+IG G+FGVV++ L + ++AIK + + + +E + ++ ++HPN+V L
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRE----LQIMRIVKHPNVVDLKAFFY 102
Query: 61 EDNNRI------LVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
+ ++ LV EY+ + +K K ++ L+++H
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQ-TMPMLLIKLYMYQLLRSLAYIHSIG 161
Query: 115 DPPIVHRDIKASNVLLDGNFHP----KIGDFGLAKLF---PDNVTHVSTRVAGTMGYLAP 167
I HRDIK N+LLD P K+ DFG AK+ NV+ + +R Y AP
Sbjct: 162 ---ICHRDIKPQNLLLDP---PSGVLKLIDFGSAKILIAGEPNVSXICSRY-----YRAP 210
Query: 168 EYAL-LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLI 208
E T D++S G ++ E++ G+ G D L+
Sbjct: 211 ELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLV 252
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 19/199 (9%)
Query: 2 IGGGAFG-VVYRGSLRDGTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V+ + G A+K L + K+ L E ++ + P L +L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY + + L +G S+ P +LH
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 160
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+++D + K+ DFG AK V + + GT YLAPE L
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 19/199 (9%)
Query: 2 IGGGAFG-VVYRGSLRDGTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V+ + G A+K L + K+ L E ++ + P L +L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY + + L +G S+ P +LH
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 160
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+++D + K+ DFG AK V + + GT YLAPE L
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E + + P LV+L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEF 109
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY + + L +G S+ P +LH
Sbjct: 110 SFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 160
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + K+ DFG AK V + + GT YLAPE L
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 216
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 15/197 (7%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 103
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+++N +V EY+ + + L + P +LH
Sbjct: 104 SFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH---SLD 156
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L K
Sbjct: 157 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 212
Query: 178 KADVYSFGVLLLEIISG 194
D ++ GVL+ E+ +G
Sbjct: 213 AVDWWALGVLIYEMAAG 229
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 105 SGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGY 164
SGL LH+ I++RD+K NVLLD + + +I D GLA T AGT G+
Sbjct: 300 SGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG-YAGTPGF 355
Query: 165 LAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKA 200
+APE L + D ++ GV L E+I+ R +A
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 105 SGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGY 164
SGL LH+ I++RD+K NVLLD + + +I D GLA T AGT G+
Sbjct: 300 SGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG-YAGTPGF 355
Query: 165 LAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKA 200
+APE L + D ++ GV L E+I+ R +A
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 105 SGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGY 164
SGL LH+ I++RD+K NVLLD + + +I D GLA T AGT G+
Sbjct: 300 SGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG-YAGTPGF 355
Query: 165 LAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKA 200
+APE L + D ++ GV L E+I+ R +A
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 15/197 (7%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+++N +V EY+ + + L + P +LH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH---SLD 161
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L K
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 178 KADVYSFGVLLLEIISG 194
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 105 SGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGY 164
SGL LH+ I++RD+K NVLLD + + +I D GLA T AGT G+
Sbjct: 300 SGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG-YAGTPGF 355
Query: 165 LAPEYALLGQLTKKADVYSFGVLLLEIISGRSSSKA 200
+APE L + D ++ GV L E+I+ R +A
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 15/197 (7%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+++N +V EY+ + + L + P +LH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH---SLD 161
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L K
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 178 KADVYSFGVLLLEIISG 194
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 15/197 (7%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+++N +V EY+ + + L + P +LH
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH---SLD 154
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L K
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 210
Query: 178 KADVYSFGVLLLEIISG 194
D ++ GVL+ E+ +G
Sbjct: 211 AVDWWALGVLIYEMAAG 227
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 24/206 (11%)
Query: 1 MIGGGAFGVVYRGSLRDGTQI-AIKCLSAES---KQGTKEFLTEIDMIWNIRHPNLVQLI 56
+IG GAFG V + ++ A+K LS + + F E D++ P +VQL
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKY-VSLDWPT--RANICLGTASGLSFLHEE 113
+D +V EY+ L N + S Y V W A + L L +H
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLM----SNYDVPEKWARFYTAEVVLA----LDAIHSM 192
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLA-KLFPDNVTHVSTRVAGTMGYLAPEYALL 172
+HRD+K N+LLD + H K+ DFG K+ + + T V GT Y++PE
Sbjct: 193 G---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKS 248
Query: 173 ----GQLTKKADVYSFGVLLLEIISG 194
G ++ D +S GV L E++ G
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 24/206 (11%)
Query: 1 MIGGGAFGVVYRGSLRDGTQI-AIKCLSAES---KQGTKEFLTEIDMIWNIRHPNLVQLI 56
+IG GAFG V + ++ A+K LS + + F E D++ P +VQL
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 135
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKY-VSLDWPT--RANICLGTASGLSFLHEE 113
+D +V EY+ L N + S Y V W A + L L +H
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLVNLM----SNYDVPEKWARFYTAEVVLA----LDAIHSM 187
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLA-KLFPDNVTHVSTRVAGTMGYLAPEYALL 172
+HRD+K N+LLD + H K+ DFG K+ + + T V GT Y++PE
Sbjct: 188 G---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKS 243
Query: 173 ----GQLTKKADVYSFGVLLLEIISG 194
G ++ D +S GV L E++ G
Sbjct: 244 QGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 15/197 (7%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+++N +V EY+ + + L + P +LH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFAEPHARFYAAQIVLTFEYLH---SLD 161
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L K
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 178 KADVYSFGVLLLEIISG 194
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 24/206 (11%)
Query: 1 MIGGGAFGVVYRGSLRDGTQI-AIKCLSAES---KQGTKEFLTEIDMIWNIRHPNLVQLI 56
+IG GAFG V + ++ A+K LS + + F E D++ P +VQL
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKY-VSLDWPT--RANICLGTASGLSFLHEE 113
+D +V EY+ L N + S Y V W A + L L +H
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLM----SNYDVPEKWARFYTAEVVLA----LDAIHSM 192
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLA-KLFPDNVTHVSTRVAGTMGYLAPEYALL 172
+HRD+K N+LLD + H K+ DFG K+ + + T V GT Y++PE
Sbjct: 193 G---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKS 248
Query: 173 ----GQLTKKADVYSFGVLLLEIISG 194
G ++ D +S GV L E++ G
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCL----SAESKQGT--KEFLTEIDMIWNIRHPNLVQ 54
+G G F +V + + G + A K + S S++G +E E+ ++ + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + +L+ E + L + L ++ SL + G+++LH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 115 DPPIVHRDIKASNV-LLDGNF---HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I H D+K N+ LLD N H K+ DFGLA D V + GT ++APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIV 190
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRS 196
L +AD++S GV+ ++SG S
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGAS 216
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 15/197 (7%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+++N +V EY+ + + L + P +LH
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH---SLD 182
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L K
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 238
Query: 178 KADVYSFGVLLLEIISG 194
D ++ GVL+ E+ +G
Sbjct: 239 AVDWWALGVLIYEMAAG 255
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 15/197 (7%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+++N +V EY+ + + L + P +LH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH---SLD 161
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L K
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 178 KADVYSFGVLLLEIISG 194
D ++ GVL+ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAPE L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ ++ +G
Sbjct: 216 NKAVDWWALGVLIYQMAAG 234
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 15/197 (7%)
Query: 2 IGGGAFG-VVYRGSLRDGTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V+ + G A+K L + K+ L E ++ + P L +L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+++N +V EY + + L + P +LH
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLH---SLD 162
Query: 118 IVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTK 177
+++RD+K N+++D + K+ DFG AK V + + GT YLAPE L K
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 178 KADVYSFGVLLLEIISG 194
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 24/211 (11%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQ-GTKEFLTEIDMIWNIRHPNLVQLIGC 58
++G GA+GVV + + G +AIK + K L EI ++ + +H N++ +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 59 ----CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
E+ N + + + L L + ++ +S D T + LH
Sbjct: 78 QRPDSFENFNEVYIIQELMQTDLHRVI---STQMLSDD--HIQYFIYQTLRAVKVLHGSN 132
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS---------TRVAGTMGYL 165
++HRD+K SN+L++ N K+ DFGLA++ ++ S T T Y
Sbjct: 133 ---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYR 189
Query: 166 APEYALL-GQLTKKADVYSFGVLLLEIISGR 195
APE L + ++ DV+S G +L E+ R
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCL----SAESKQGT--KEFLTEIDMIWNIRHPNLVQ 54
+G G F +V + + G + A K + S S++G +E E+ ++ + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + +L+ E + L + L ++ SL + G+++LH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 115 DPPIVHRDIKASNV-LLDGNF---HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I H D+K N+ LLD N H K+ DFGLA D V + GT ++APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIV 190
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRS 196
L +AD++S GV+ ++SG S
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGAS 216
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCL----SAESKQGT--KEFLTEIDMIWNIRHPNLVQ 54
+G G F +V + + G + A K + S S++G +E E+ ++ + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + +L+ E + L + L ++ SL + G+++LH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 115 DPPIVHRDIKASNV-LLDGNF---HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I H D+K N+ LLD N H K+ DFGLA D V + GT ++APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIV 190
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRS 196
L +AD++S GV+ ++SG S
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGAS 216
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 89/201 (44%), Gaps = 22/201 (10%)
Query: 2 IGGGAFGVVYRGSLRDGTQ---IAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG G FGV +RD +A+K + K EI ++RHPN+V+
Sbjct: 27 IGSGNFGVARL--MRDKQSNELVAVKYIERGEKIAAN-VKREIINHRSLRHPNIVRFKEV 83
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGT-ASGLSFLHEEADPP 117
+ + +V EY L + + S D A SG+S+ H
Sbjct: 84 ILTPTHLAIVMEYASGGELFERICNAGR--FSED---EARFFFQQLISGVSYCHAMQ--- 135
Query: 118 IVHRDIKASNVLLDGNFHP--KIGDFGLAKLFPDNVTHVSTR-VAGTMGYLAPEYALLGQ 174
+ HRD+K N LLDG+ P KI DFG +K +V H + GT Y+APE L +
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKE 192
Query: 175 LTKK-ADVYSFGVLLLEIISG 194
K ADV+S GV L ++ G
Sbjct: 193 YDGKVADVWSCGVTLYVMLVG 213
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 24/211 (11%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQ-GTKEFLTEIDMIWNIRHPNLVQLIGC 58
++G GA+GVV + + G +AIK + K L EI ++ + +H N++ +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 59 ----CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
E+ N + + + L L + ++ +S D T + LH
Sbjct: 78 QRPDSFENFNEVYIIQELMQTDLHRVI---STQMLSDD--HIQYFIYQTLRAVKVLHGSN 132
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS---------TRVAGTMGYL 165
++HRD+K SN+L++ N K+ DFGLA++ ++ S T T Y
Sbjct: 133 ---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYR 189
Query: 166 APEYALL-GQLTKKADVYSFGVLLLEIISGR 195
APE L + ++ DV+S G +L E+ R
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCL----SAESKQGT--KEFLTEIDMIWNIRHPNLVQ 54
+G G F +V + + G + A K + S S++G +E E+ ++ + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + +L+ E + L + L ++ SL + G+++LH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 115 DPPIVHRDIKASNV-LLDGNF---HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I H D+K N+ LLD N H K+ DFGLA D V + GT ++APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIV 190
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRS 196
L +AD++S GV+ ++SG S
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGAS 216
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+G G+FG V+R + G Q A+K + E + E+ + P +V L G
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVR 136
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTA-SGLSFLHEEADPPIV 119
E + E LE SL L + + D RA LG A GL +LH I+
Sbjct: 137 EGPWVNIFMELLEGGSLGQ--LVKEQGCLPED---RALYYLGQALEGLEYLHSRR---IL 188
Query: 120 HRDIKASNVLL--DGNFHPKIGDFGLA-KLFPDNVTH---VSTRVAGTMGYLAPEYALLG 173
H D+KA NVLL DG+ H + DFG A L PD + + GT ++APE L
Sbjct: 189 HGDVKADNVLLSSDGS-HAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGR 247
Query: 174 QLTKKADVYSFGVLLLEIISG 194
K DV+S ++L +++G
Sbjct: 248 SCDAKVDVWSSCCMMLHMLNG 268
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCL----SAESKQGT--KEFLTEIDMIWNIRHPNLVQ 54
+G G F +V + + G + A K + S S++G +E E+ ++ + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + +L+ E + L + L ++ SL + G+++LH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 115 DPPIVHRDIKASNV-LLDGNF---HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I H D+K N+ LLD N H K+ DFGLA D V + GT ++APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEIV 190
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRS 196
L +AD++S GV+ ++SG S
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGAS 216
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLS--------AESKQGTKEFLTEIDMIWNIRHPNL 52
+G GA G V R + +AIK +S A TEI+++ + HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 53 VQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHE 112
++ I + + +V E +E L + ++G+K L T + +LHE
Sbjct: 78 IK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYFYQMLLAVQYLHE 132
Query: 113 EADPPIVHRDIKASNVLLDGNFHP---KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEY 169
I+HRD+K NVLL KI DFG +K+ + T + + GT YLAPE
Sbjct: 133 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLAPEV 187
Query: 170 AL---LGQLTKKADVYSFGVLLLEIISG 194
+ + D +S GV+L +SG
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 100/236 (42%), Gaps = 37/236 (15%)
Query: 2 IGGGAFGVV-YRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+G G F V L DG A+K + +Q +E E DM HPN+++L+ C+
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 61 ED----NNRILVYEYLENNSLANAL--LGSKSKYVSLD---WPTRANICLGTASGLSFLH 111
+ + L+ + + +L N + L K +++ D W + LG GL +H
Sbjct: 97 RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILW-----LLLGICRGLEAIH 151
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS-TRVA----------G 160
+ HRD+K +N+LL P + D G HV +R A
Sbjct: 152 AKG---YAHRDLKPTNILLGDEGQPVLMDLGSMN---QACIHVEGSRQALTLQDWAAQRC 205
Query: 161 TMGYLAPEYALLGQ---LTKKADVYSFGVLLLEIISGRSSSKAAF--GDDMLILVE 211
T+ Y APE + + ++ DV+S G +L ++ G F GD + + V+
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ 261
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLS--------AESKQGTKEFLTEIDMIWNIRHPNL 52
+G GA G V R + +AIK +S A TEI+++ + HP +
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 53 VQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHE 112
++ I + + +V E +E L + ++G+K L T + +LHE
Sbjct: 77 IK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYFYQMLLAVQYLHE 131
Query: 113 EADPPIVHRDIKASNVLLDGNFHP---KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEY 169
I+HRD+K NVLL KI DFG +K+ + T + + GT YLAPE
Sbjct: 132 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLAPEV 186
Query: 170 AL---LGQLTKKADVYSFGVLLLEIISG 194
+ + D +S GV+L +SG
Sbjct: 187 LVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLS--------AESKQGTKEFLTEIDMIWNIRHPNL 52
+G GA G V R + +AIK +S A TEI+++ + HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 53 VQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHE 112
++ I + + +V E +E L + ++G+K L T + +LHE
Sbjct: 78 IK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYFYQMLLAVQYLHE 132
Query: 113 EADPPIVHRDIKASNVLLDGNFHP---KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEY 169
I+HRD+K NVLL KI DFG +K+ + T + + GT YLAPE
Sbjct: 133 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLAPEV 187
Query: 170 AL---LGQLTKKADVYSFGVLLLEIISG 194
+ + D +S GV+L +SG
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLIGC 58
IG GA G+V G +A+K LS + T K E+ ++ + H N++ L+
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 59 CV------EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHE 112
E + LV E ++ N L + ++ LD + + G+ LH
Sbjct: 90 FTPQKTLEEFQDVYLVMELMDAN-LCQVI------HMELDHERMSYLLYQMLCGIKHLHS 142
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALL 172
I+HRD+K SN+++ + KI DFGLA+ N + T T Y APE L
Sbjct: 143 AG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNF--MMTPYVVTRYYRAPEVILG 197
Query: 173 GQLTKKADVYSFGVLLLEIISG 194
+ D++S G ++ E++ G
Sbjct: 198 MGYKENVDIWSVGCIMGELVKG 219
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLS--------AESKQGTKEFLTEIDMIWNIRHPNL 52
+G GA G V R + +AIK +S A TEI+++ + HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 53 VQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHE 112
++ I + + +V E +E L + ++G+K L T + +LHE
Sbjct: 78 IK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYFYQMLLAVQYLHE 132
Query: 113 EADPPIVHRDIKASNVLLDGNFHP---KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEY 169
I+HRD+K NVLL KI DFG +K+ + T + + GT YLAPE
Sbjct: 133 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLAPEV 187
Query: 170 AL---LGQLTKKADVYSFGVLLLEIISG 194
+ + D +S GV+L +SG
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 86/198 (43%), Gaps = 16/198 (8%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G FGV + ++ ++ + EI ++RHPN+V+ +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGT-ASGLSFLHEEADPPIVH 120
+ +V EY L + + S D A SG+S+ H + H
Sbjct: 86 PTHLAIVMEYASGGELFERICNAGR--FSED---EARFFFQQLISGVSYCHAMQ---VCH 137
Query: 121 RDIKASNVLLDGNFHP--KIGDFGLAKLFPDNVTHVSTR-VAGTMGYLAPEYALLGQLTK 177
RD+K N LLDG+ P KI DFG +K +V H + GT Y+APE L +
Sbjct: 138 RDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDG 194
Query: 178 K-ADVYSFGVLLLEIISG 194
K ADV+S GV L ++ G
Sbjct: 195 KVADVWSCGVTLYVMLVG 212
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 23/209 (11%)
Query: 1 MIGGGAFGVVYRGSLRDGTQI-AIKCLSAES---KQGTKEFLTEIDMIWNIRHPNLVQLI 56
+IG GAFG V L++ ++ A+K L+ + T F E D++ N + L
Sbjct: 81 VIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLH 140
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKY---VSLDWPTRANICLGTASGLSFLHEE 113
+DNN LV +Y L L + + ++ + I + + L +
Sbjct: 141 YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY---- 196
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFG-LAKLFPDNVTHVSTRVAGTMGYLAPEYALL 172
VHRDIK N+L+D N H ++ DFG KL D S V GT Y++PE
Sbjct: 197 -----VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV-GTPDYISPEILQA 250
Query: 173 -----GQLTKKADVYSFGVLLLEIISGRS 196
G+ + D +S GV + E++ G +
Sbjct: 251 MEGGKGRYGPECDWWSLGVCMYEMLYGET 279
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+G G+FG V+R + G Q A+K + E + E+ + P +V L G
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVR 155
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTA-SGLSFLHEEADPPIV 119
E + E LE SL L + + D RA LG A GL +LH I+
Sbjct: 156 EGPWVNIFMELLEGGSLGQ--LVKEQGCLPED---RALYYLGQALEGLEYLHSRR---IL 207
Query: 120 HRDIKASNVLL--DGNFHPKIGDFGLA-KLFPDNVTH---VSTRVAGTMGYLAPEYALLG 173
H D+KA NVLL DG+ H + DFG A L PD + + GT ++APE L
Sbjct: 208 HGDVKADNVLLSSDGS-HAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGR 266
Query: 174 QLTKKADVYSFGVLLLEIISG 194
K DV+S ++L +++G
Sbjct: 267 SCDAKVDVWSSCCMMLHMLNG 287
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLS--------AESKQGTKEFLTEIDMIWNIRHPNL 52
+G GA G V R + +AIK +S A TEI+++ + HP +
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 53 VQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHE 112
++ I + + +V E +E L + ++G+K L T + +LHE
Sbjct: 84 IK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYFYQMLLAVQYLHE 138
Query: 113 EADPPIVHRDIKASNVLLDGNFHP---KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEY 169
I+HRD+K NVLL KI DFG +K+ + T + + GT YLAPE
Sbjct: 139 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLAPEV 193
Query: 170 AL---LGQLTKKADVYSFGVLLLEIISG 194
+ + D +S GV+L +SG
Sbjct: 194 LVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 28/204 (13%)
Query: 2 IGGGAFGVVYRGSLRDGTQ---IAIKCL---SAESKQGTKEFLTEIDMIWNIRHPNLVQL 55
IG G FGV +RD +A+K + +A + +E + ++RHPN+V+
Sbjct: 28 IGSGNFGVARL--MRDKLTKELVAVKYIERGAAIDENVQREIINH----RSLRHPNIVRF 81
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTA-SGLSFLHEEA 114
+ + ++ EY L + + S D A SG+S+ H
Sbjct: 82 KEVILTPTHLAIIMEYASGGELYERICNAGR--FSED---EARFFFQQLLSGVSYCHSMQ 136
Query: 115 DPPIVHRDIKASNVLLDGNFHP--KIGDFGLAKLFPDNVTHVSTR-VAGTMGYLAPEYAL 171
I HRD+K N LLDG+ P KI DFG +K +V H + GT Y+APE L
Sbjct: 137 ---ICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLL 190
Query: 172 LGQLTKK-ADVYSFGVLLLEIISG 194
+ K ADV+S GV L ++ G
Sbjct: 191 RQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 1 MIGGGAFGVVYRGSLRDGTQI-AIKCLSAES---KQGTKEFLTEIDMIWNIRHPNLVQLI 56
+IG GAFG V +++ +I A+K L+ + T F E D++ N + L
Sbjct: 81 VIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALH 140
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLG-TASGLSFLHEEAD 115
++N+ LV +Y L L SK+ A +G + +H+
Sbjct: 141 YAFQDENHLYLVMDYYVGGDLLTLL----SKFEDKLPEDMARFYIGEMVLAIDSIHQLH- 195
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYAL---- 171
VHRDIK NVLLD N H ++ DFG D+ T S+ GT Y++PE
Sbjct: 196 --YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 253
Query: 172 -LGQLTKKADVYSFGVLLLEIISGRS 196
+G+ + D +S GV + E++ G +
Sbjct: 254 GMGKYGPECDWWSLGVCMYEMLYGET 279
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 1 MIGGGAFGVVYRGSLRDGTQI-AIKCLSAES---KQGTKEFLTEIDMIWNIRHPNLVQLI 56
+IG GAFG V +++ +I A+K L+ + T F E D++ N + L
Sbjct: 97 VIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALH 156
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLG-TASGLSFLHEEAD 115
++N+ LV +Y L L SK+ A +G + +H+
Sbjct: 157 YAFQDENHLYLVMDYYVGGDLLTLL----SKFEDKLPEDMARFYIGEMVLAIDSIHQ--- 209
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYAL---- 171
VHRDIK NVLLD N H ++ DFG D+ T S+ GT Y++PE
Sbjct: 210 LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 269
Query: 172 -LGQLTKKADVYSFGVLLLEIISGRS 196
+G+ + D +S GV + E++ G +
Sbjct: 270 GMGKYGPECDWWSLGVCMYEMLYGET 295
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+++D + ++ DFG AK V + + GT YLAPE +
Sbjct: 160 LDLIYRDLKPENLIIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIISKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLS----AESKQGT--KEFLTEIDMIWNIRHPNLVQ 54
+G G F +V + + G + A K + + S++G +E E++++ IRHPN++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + +L+ E + L + L +S ++ D T+ G+ +LH +
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQ--FLKQILDGVHYLHSKR 135
Query: 115 DPPIVHRDIKASNV-LLDGNF-HPKIG--DFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I H D+K N+ LLD N +P+I DFG+A + + GT ++APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVAPEIV 190
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRS 196
L +AD++S GV+ ++SG S
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGAS 216
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 33/219 (15%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V R G ++AIK LS +S+ K E+ ++ +++H N++ L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 59 CVEDN------NRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHE 112
+ + LV +++ + ++G K + + + GL ++H
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTD--LQKIMGLKFSEEKIQY-----LVYQMLKGLKYIHS 144
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAG---TMGYLAPEY 169
+VHRD+K N+ ++ + KI DFGLA+ H + G T Y APE
Sbjct: 145 AG---VVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRWYRAPEV 194
Query: 170 AL-LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDML 207
L + D++S G ++ E+++G++ K G D L
Sbjct: 195 ILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK---GKDYL 230
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSAE--SKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GAF VV R + G + A K ++ + S + ++ E + ++HPN+V+L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTA-SGLSFLHEEADPP 117
E+ + L+++ + L ++ ++ Y D A+ C+ + H+
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIV-AREYYSEAD----ASHCIQQILEAVLHCHQMG--- 141
Query: 118 IVHRDIKASNVLLDGNFH---PKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
+VHRD+K N+LL K+ DFGLA + + AGT GYL+PE
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 175 LTKKADVYSFGVLLLEIISG 194
K D+++ GV+L ++ G
Sbjct: 201 YGKPVDLWACGVILYILLVG 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 111/251 (44%), Gaps = 38/251 (15%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL---I 56
+IG G+FGVVY+ L D G +AIK + + + +E + ++ + H N+V+L
Sbjct: 40 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 95
Query: 57 GCCVEDNNRI---LVYEYLENNSLANALLGSKSK------YVSLDWPTRANICLGTASGL 107
E + + LV +Y+ A S++K YV L L
Sbjct: 96 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-------YMYQLFRSL 148
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHP-KIGDFGLAKLF---PDNVTHVSTRVAGTMG 163
+++H I HRDIK N+LLD + K+ DFG AK NV+++ +R
Sbjct: 149 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 200
Query: 164 YLAPEYAL-LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
Y APE T DV+S G +L E++ G+ G D L+ + ++
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 260
Query: 223 LEIVDPELTQF 233
E+ +P T+F
Sbjct: 261 REM-NPNYTEF 270
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 32 IGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 57 GC-----CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLH 111
+E+ + + L + +L+ + + LD + + G+ LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLVGIKHLH 143
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYAL 171
I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE L
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 172 LGQLTKKADVYSFGVLLLEIISG 194
+ D++S GV++ E+I G
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLS----AESKQGT--KEFLTEIDMIWNIRHPNLVQ 54
+G G F +V + + G + A K + + S++G +E E++++ IRHPN++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + +L+ E + L + L +S ++ D T+ G+ +LH +
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQ--FLKQILDGVHYLHSKR 128
Query: 115 DPPIVHRDIKASNV-LLDGNF-HPKIG--DFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I H D+K N+ LLD N +P+I DFG+A + + GT ++APE
Sbjct: 129 ---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVAPEIV 183
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRS 196
L +AD++S GV+ ++SG S
Sbjct: 184 NYEPLGLEADMWSIGVITYILLSGAS 209
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 111/251 (44%), Gaps = 38/251 (15%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL---I 56
+IG G+FGVVY+ L D G +AIK + + + +E + ++ + H N+V+L
Sbjct: 55 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 110
Query: 57 GCCVEDNNRI---LVYEYLENNSLANALLGSKSK------YVSLDWPTRANICLGTASGL 107
E + + LV +Y+ A S++K YV L L
Sbjct: 111 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-------YMYQLFRSL 163
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHP-KIGDFGLAKLF---PDNVTHVSTRVAGTMG 163
+++H I HRDIK N+LLD + K+ DFG AK NV+++ +R
Sbjct: 164 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 215
Query: 164 YLAPEYAL-LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
Y APE T DV+S G +L E++ G+ G D L+ + ++
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 275
Query: 223 LEIVDPELTQF 233
E+ +P T+F
Sbjct: 276 REM-NPNYTEF 285
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 111/251 (44%), Gaps = 38/251 (15%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL---I 56
+IG G+FGVVY+ L D G +AIK + + + +E + ++ + H N+V+L
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 116
Query: 57 GCCVEDNNRI---LVYEYLENNSLANALLGSKSK------YVSLDWPTRANICLGTASGL 107
E + + LV +Y+ A S++K YV L L
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-------YMYQLFRSL 169
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHP-KIGDFGLAKLF---PDNVTHVSTRVAGTMG 163
+++H I HRDIK N+LLD + K+ DFG AK NV+++ +R
Sbjct: 170 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 221
Query: 164 YLAPEYAL-LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
Y APE T DV+S G +L E++ G+ G D L+ + ++
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281
Query: 223 LEIVDPELTQF 233
E+ +P T+F
Sbjct: 282 REM-NPNYTEF 291
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 111/251 (44%), Gaps = 38/251 (15%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL---I 56
+IG G+FGVVY+ L D G +AIK + + + +E + ++ + H N+V+L
Sbjct: 63 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 118
Query: 57 GCCVEDNNRI---LVYEYLENNSLANALLGSKSK------YVSLDWPTRANICLGTASGL 107
E + + LV +Y+ A S++K YV L L
Sbjct: 119 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-------YMYQLFRSL 171
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHP-KIGDFGLAKLF---PDNVTHVSTRVAGTMG 163
+++H I HRDIK N+LLD + K+ DFG AK NV+++ +R
Sbjct: 172 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 223
Query: 164 YLAPEYAL-LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
Y APE T DV+S G +L E++ G+ G D L+ + ++
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 283
Query: 223 LEIVDPELTQF 233
E+ +P T+F
Sbjct: 284 REM-NPNYTEF 293
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 111/251 (44%), Gaps = 38/251 (15%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL---I 56
+IG G+FGVVY+ L D G +AIK + + + +E + ++ + H N+V+L
Sbjct: 106 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 161
Query: 57 GCCVEDNNRI---LVYEYLENNSLANALLGSKSK------YVSLDWPTRANICLGTASGL 107
E + + LV +Y+ A S++K YV L L
Sbjct: 162 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-------YMYQLFRSL 214
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHP-KIGDFGLAKLF---PDNVTHVSTRVAGTMG 163
+++H I HRDIK N+LLD + K+ DFG AK NV+++ +R
Sbjct: 215 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 266
Query: 164 YLAPEYAL-LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
Y APE T DV+S G +L E++ G+ G D L+ + ++
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 326
Query: 223 LEIVDPELTQF 233
E+ +P T+F
Sbjct: 327 REM-NPNYTEF 336
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL---I 56
+IG G+FGVVY+ L D G +AIK + + + +E + ++ + H N+V+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 82
Query: 57 GCCVEDNNRI---LVYEYLENNSLANALLGSKSK------YVSLDWPTRANICLGTASGL 107
E + + LV +Y+ A S++K YV L L
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-------YMYQLFRSL 135
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHP-KIGDFGLAKLF---PDNVTHVSTRVAGTMG 163
+++H I HRDIK N+LLD + K+ DFG AK NV+++ +R
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 187
Query: 164 YLAPEYAL-LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLI 208
Y APE T DV+S G +L E++ G+ G D L+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 233
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 19/201 (9%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTK-EFLTEIDMIWNIRHPNLVQLIGCC 59
+G G + VY+G + +A+K + E ++G + E+ ++ +++H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL---GTASGLSFLHEEADP 116
+ + LV+EYL+ + L +++ N+ L GL++ H +
Sbjct: 70 HTEKSLTLVFEYLDKD--LKQYLDDCGNIINMH-----NVKLFLFQLLRGLAYCHRQK-- 120
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG--Q 174
++HRD+K N+L++ K+ DFGLA+ V T+ Y P+ LLG
Sbjct: 121 -VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPD-ILLGSTD 177
Query: 175 LTKKADVYSFGVLLLEIISGR 195
+ + D++ G + E+ +GR
Sbjct: 178 YSTQIDMWGVGCIFYEMATGR 198
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 26/204 (12%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSAESKQ----GTKEFLTEIDMIWNIRHPNLVQLI 56
+G G +G VY+ +AIK + E ++ GT + E+ ++ ++H N+++L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA--IREVSLLKELQHRNIIEL- 98
Query: 57 GCCVEDNNRI-LVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+ N+R+ L++EY EN+ L K + + +G++F H
Sbjct: 99 KSVIHHNHRLHLIFEYAEND-----LKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR- 152
Query: 116 PPIVHRDIKASNVLL---DGNFHP--KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
+HRD+K N+LL D + P KIGDFGLA+ F + + + T+ Y PE
Sbjct: 153 --CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLWYRPPE-I 208
Query: 171 LLG--QLTKKADVYSFGVLLLEII 192
LLG + D++S + E++
Sbjct: 209 LLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 57 GC-----CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLH 111
+E+ + + L + +L+ + + LD + + G+ LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLVGIKHLH 143
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYAL 171
I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE L
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 172 LGQLTKKADVYSFGVLLLEIISG 194
+ D++S GV++ E+I G
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 111/251 (44%), Gaps = 38/251 (15%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL---I 56
+IG G+FGVVY+ L D G +AIK + + + +E + ++ + H N+V+L
Sbjct: 32 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 87
Query: 57 GCCVEDNNRI---LVYEYLENNSLANALLGSKSK------YVSLDWPTRANICLGTASGL 107
E + + LV +Y+ A S++K YV L L
Sbjct: 88 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-------YMYQLFRSL 140
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHP-KIGDFGLAKLF---PDNVTHVSTRVAGTMG 163
+++H I HRDIK N+LLD + K+ DFG AK NV+++ +R
Sbjct: 141 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 192
Query: 164 YLAPEYAL-LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
Y APE T DV+S G +L E++ G+ G D L+ + ++
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 252
Query: 223 LEIVDPELTQF 233
E+ +P T+F
Sbjct: 253 REM-NPNYTEF 262
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 111/251 (44%), Gaps = 38/251 (15%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL---I 56
+IG G+FGVVY+ L D G +AIK + + + +E + ++ + H N+V+L
Sbjct: 65 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 120
Query: 57 GCCVEDNNRI---LVYEYLENNSLANALLGSKSK------YVSLDWPTRANICLGTASGL 107
E + + LV +Y+ A S++K YV L L
Sbjct: 121 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-------YMYQLFRSL 173
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHP-KIGDFGLAKLF---PDNVTHVSTRVAGTMG 163
+++H I HRDIK N+LLD + K+ DFG AK NV+++ +R
Sbjct: 174 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 225
Query: 164 YLAPEYAL-LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
Y APE T DV+S G +L E++ G+ G D L+ + ++
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 285
Query: 223 LEIVDPELTQF 233
E+ +P T+F
Sbjct: 286 REM-NPNYTEF 295
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT YLAP L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPAIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLIGC 58
IG GA G+V G +A+K LS + T K E+ ++ + H N++ L+
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 59 CV------EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHE 112
E + LV E ++ N L + ++ LD + + G+ LH
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDAN-LCQVI------HMELDHERMSYLLYQMLCGIKHLHS 144
Query: 113 EADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALL 172
I+HRD+K SN+++ + KI DFGLA+ N + T T Y APE L
Sbjct: 145 AG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF--MMTPYVVTRYYRAPEVILG 199
Query: 173 GQLTKKADVYSFGVLLLEIISG 194
D++S G ++ E++ G
Sbjct: 200 MGYAANVDIWSVGCIMGELVKG 221
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 114/265 (43%), Gaps = 44/265 (16%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL---I 56
+IG G+FGVVY+ L D G +AIK + QG E+ ++ + H N+V+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 57 GCCVEDNNRI---LVYEYLENNSLANALLGSKSK------YVSLDWPTRANICLGTASGL 107
E + + LV +Y+ A S++K YV L L
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-------YMYQLFRSL 135
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHP-KIGDFGLAKLF---PDNVTHVSTRVAGTMG 163
+++H I HRDIK N+LLD + K+ DFG AK NV+++ +R
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 187
Query: 164 YLAPEYAL-LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDML--ILVEWTWKLREEG 220
Y APE T DV+S G +L E++ G+ G D L I+ RE+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247
Query: 221 RLL-----EIVDPELTQFPEKEVMR 240
R + E P++ P +V R
Sbjct: 248 REMNPNYTEFAFPQIKAHPWTKVFR 272
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 110/251 (43%), Gaps = 38/251 (15%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL---I 56
+IG G+FGVVY+ L D G +AIK + QG E+ ++ + H N+V+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 57 GCCVEDNNRI---LVYEYLENNSLANALLGSKSK------YVSLDWPTRANICLGTASGL 107
E + + LV +Y+ A S++K YV L L
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-------YMYQLFRSL 135
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHP-KIGDFGLAKLF---PDNVTHVSTRVAGTMG 163
+++H I HRDIK N+LLD + K+ DFG AK NV+++ +R
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY----- 187
Query: 164 YLAPEYAL-LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
Y APE T DV+S G +L E++ G+ G D L+ + ++
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247
Query: 223 LEIVDPELTQF 233
E+ +P T+F
Sbjct: 248 REM-NPNYTEF 257
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 24/211 (11%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQ-GTKEFLTEIDMIWNIRHPNLVQLIGC 58
++G GA+GVV + + G +AIK + K L EI ++ + +H N++ +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 59 ----CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
E+ N + + + L L + ++ +S D T + LH
Sbjct: 78 QRPDSFENFNEVYIIQELMQTDLHRVI---STQMLSDD--HIQYFIYQTLRAVKVLHGSN 132
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVS---------TRVAGTMGYL 165
++HRD+K SN+L++ N K+ DFGLA++ ++ S T Y
Sbjct: 133 ---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYR 189
Query: 166 APEYALL-GQLTKKADVYSFGVLLLEIISGR 195
APE L + ++ DV+S G +L E+ R
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 25/208 (12%)
Query: 2 IGGGAFGVVYRGSLRDGTQ-IAIKCLS--------AESKQGTKEFLTEIDMIWNIRHPNL 52
+G GA G V R + +AI+ +S A TEI+++ + HP +
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 53 VQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHE 112
++ I + + +V E +E L + ++G+K L T + +LHE
Sbjct: 203 IK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYFYQMLLAVQYLHE 257
Query: 113 EADPPIVHRDIKASNVLLDGNFHP---KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEY 169
I+HRD+K NVLL KI DFG +K+ + T + + GT YLAPE
Sbjct: 258 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTPTYLAPEV 312
Query: 170 AL---LGQLTKKADVYSFGVLLLEIISG 194
+ + D +S GV+L +SG
Sbjct: 313 LVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 25/215 (11%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GA+G V R G ++AIK LS +S+ K E+ ++ +++H N++ L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTR--ANICLGTASGLSFLHEEADP 116
++ Y++ L K + +++ + GL ++H
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDL---QKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG-- 164
Query: 117 PIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAG---TMGYLAPEYAL-L 172
+VHRD+K N+ ++ + KI DFGLA+ H + G T Y APE L
Sbjct: 165 -VVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRWYRAPEVILSW 216
Query: 173 GQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDML 207
+ D++S G ++ E+++G++ K G D L
Sbjct: 217 MHYNQTVDIWSVGCIMAEMLTGKTLFK---GKDYL 248
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 20/206 (9%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAE----SKQGT--KEFLTEIDMIWNIRHPNLVQ 54
+G G F +V + + G + A K + S++G +E E++++ IRHPN++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + +L+ E + L + L +S ++ D T+ G+ +LH +
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQ--FLKQILDGVHYLHSKR 149
Query: 115 DPPIVHRDIKASNV-LLDGNF-HPKIG--DFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I H D+K N+ LLD N +P+I DFG+A + + GT ++APE
Sbjct: 150 ---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVAPEIV 204
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRS 196
L +AD++S GV+ ++SG S
Sbjct: 205 NYEPLGLEADMWSIGVITYILLSGAS 230
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 16/162 (9%)
Query: 39 TEIDMIWNIRHPNLVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRAN 98
TEI+++ + HP +++ I + + +V E +E L + ++G+K L T
Sbjct: 203 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKL 257
Query: 99 ICLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHP---KIGDFGLAKLFPDNVTHVS 155
+ +LHE I+HRD+K NVLL KI DFG +K+ + T +
Sbjct: 258 YFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLM 312
Query: 156 TRVAGTMGYLAPEYAL---LGQLTKKADVYSFGVLLLEIISG 194
+ GT YLAPE + + D +S GV+L +SG
Sbjct: 313 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 38/251 (15%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL---I 56
+IG G+FGVVY+ L D G +AIK + + + +E + ++ + H N+V+L
Sbjct: 35 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 90
Query: 57 GCCVEDNNRI---LVYEYLENNSLANALLGSKSK------YVSLDWPTRANICLGTASGL 107
E + + LV +Y+ A S++K YV L L
Sbjct: 91 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-------YMYQLFRSL 143
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHP-KIGDFGLAKLF---PDNVTHVSTRVAGTMG 163
+++H I HRDIK N+LLD + K+ DFG AK NV+ + +R
Sbjct: 144 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----- 195
Query: 164 YLAPEYAL-LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
Y APE T DV+S G +L E++ G+ G D L+ + ++
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 255
Query: 223 LEIVDPELTQF 233
E+ +P T+F
Sbjct: 256 REM-NPNYTEF 265
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 95/221 (42%), Gaps = 55/221 (24%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIK-----CLSAESKQGTKEFLTEIDMIWNIRHPNLVQ 54
++G GA G +VYRG D +A+K C S ++ + L E D HPN+++
Sbjct: 31 VLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFADRE--VQLLRESD-----EHPNVIR 82
Query: 55 LIGCCVEDNNRI----------LVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTA 104
C E + + + EY+E A+ LG + + T
Sbjct: 83 YF--CTEKDRQFQYIAIELCAATLQEYVEQKDFAH--LGLEP----------ITLLQQTT 128
Query: 105 SGLSFLHEEADPPIVHRDIKASNVLLD-----GNFHPKIGDFGLAKLFPDNVTHVSTR-- 157
SGL+ LH IVHRD+K N+L+ G I DFGL K S R
Sbjct: 129 SGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSG 185
Query: 158 VAGTMGYLAPEYALLGQLTKK-----ADVYSFGVLLLEIIS 193
V GT G++APE +L + K+ D++S G + +IS
Sbjct: 186 VPGTEGWIAPE--MLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 38/251 (15%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL---I 56
+IG G+FGVVY+ L D G +AIK + + + +E + ++ + H N+V+L
Sbjct: 46 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 101
Query: 57 GCCVEDNNRI---LVYEYLENNSLANALLGSKSK------YVSLDWPTRANICLGTASGL 107
E + + LV +Y+ A S++K YV L L
Sbjct: 102 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-------YMYQLFRSL 154
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHP-KIGDFGLAKLF---PDNVTHVSTRVAGTMG 163
+++H I HRDIK N+LLD + K+ DFG AK NV+ + +R
Sbjct: 155 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----- 206
Query: 164 YLAPEYAL-LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
Y APE T DV+S G +L E++ G+ G D L+ + ++
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 266
Query: 223 LEIVDPELTQF 233
E+ +P T+F
Sbjct: 267 REM-NPNYTEF 276
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 38/251 (15%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL---I 56
+IG G+FGVVY+ L D G +AIK + + + +E + ++ + H N+V+L
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 116
Query: 57 GCCVEDNNRI---LVYEYLENNSLANALLGSKSK------YVSLDWPTRANICLGTASGL 107
E + + LV +Y+ A S++K YV L L
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-------YMYQLFRSL 169
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHP-KIGDFGLAKLF---PDNVTHVSTRVAGTMG 163
+++H I HRDIK N+LLD + K+ DFG AK NV+ + +R
Sbjct: 170 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----- 221
Query: 164 YLAPEYAL-LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
Y APE T DV+S G +L E++ G+ G D L+ + ++
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281
Query: 223 LEIVDPELTQF 233
E+ +P T+F
Sbjct: 282 REM-NPNYTEF 291
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 38/251 (15%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL---I 56
+IG G+FGVVY+ L D G +AIK + + + +E + ++ + H N+V+L
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 94
Query: 57 GCCVEDNNRI---LVYEYLENNSLANALLGSKSK------YVSLDWPTRANICLGTASGL 107
E + + LV +Y+ A S++K YV L L
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-------YMYQLFRSL 147
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHP-KIGDFGLAKLF---PDNVTHVSTRVAGTMG 163
+++H I HRDIK N+LLD + K+ DFG AK NV+ + +R
Sbjct: 148 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----- 199
Query: 164 YLAPEYAL-LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
Y APE T DV+S G +L E++ G+ G D L+ + ++
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 259
Query: 223 LEIVDPELTQF 233
E+ +P T+F
Sbjct: 260 REM-NPNYTEF 269
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 38/251 (15%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL---I 56
+IG G+FGVVY+ L D G +AIK + + + +E + ++ + H N+V+L
Sbjct: 31 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 86
Query: 57 GCCVEDNNRI---LVYEYLENNSLANALLGSKSK------YVSLDWPTRANICLGTASGL 107
E + + LV +Y+ A S++K YV L L
Sbjct: 87 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-------YMYQLFRSL 139
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHP-KIGDFGLAKLF---PDNVTHVSTRVAGTMG 163
+++H I HRDIK N+LLD + K+ DFG AK NV+ + +R
Sbjct: 140 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----- 191
Query: 164 YLAPEYAL-LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
Y APE T DV+S G +L E++ G+ G D L+ + ++
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 251
Query: 223 LEIVDPELTQF 233
E+ +P T+F
Sbjct: 252 REM-NPNYTEF 261
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL---I 56
+IG G+FGVVY+ L D G +AIK + + + +E + ++ + H N+V+L
Sbjct: 28 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 83
Query: 57 GCCVEDNNRI---LVYEYLENNSLANALLGSKSK------YVSLDWPTRANICLGTASGL 107
E + + LV +Y+ A S++K YV L L
Sbjct: 84 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-------YMYQLFRSL 136
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHP-KIGDFGLAKLF---PDNVTHVSTRVAGTMG 163
+++H I HRDIK N+LLD + K+ DFG AK NV+ + +R
Sbjct: 137 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----- 188
Query: 164 YLAPEYAL-LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLI 208
Y APE T DV+S G +L E++ G+ G D L+
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 234
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 38/251 (15%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL---I 56
+IG G+FGVVY+ L D G +AIK + + + +E + ++ + H N+V+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 82
Query: 57 GCCVEDNNRI---LVYEYLENNSLANALLGSKSK------YVSLDWPTRANICLGTASGL 107
E + + LV +Y+ A S++K YV L L
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-------YMYQLFRSL 135
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHP-KIGDFGLAKLF---PDNVTHVSTRVAGTMG 163
+++H I HRDIK N+LLD + K+ DFG AK NV+ + +R
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----- 187
Query: 164 YLAPEYAL-LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
Y APE T DV+S G +L E++ G+ G D L+ + ++
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247
Query: 223 LEIVDPELTQF 233
E+ +P T+F
Sbjct: 248 REM-NPNYTEF 257
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 19/199 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF---LTEIDMIWNIRHPNLVQLIG 57
+G G+FG V ++ G A+K L + K+ L E ++ + P LV+L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 58 CCVEDNNRILVYEYLENNSLANAL--LGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
+++N +V EY+ + + L +G S+ P +LH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE------PHARFYAAQIVLTFEYLH---S 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
+++RD+K N+L+D + ++ DFG AK V + + GT LAPE L
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEALAPEIILSKGY 215
Query: 176 TKKADVYSFGVLLLEIISG 194
K D ++ GVL+ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 38/251 (15%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL---I 56
+IG G+FGVVY+ L D G +AIK + + + +E + ++ + H N+V+L
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 94
Query: 57 GCCVEDNNRI---LVYEYLENNSLANALLGSKSK------YVSLDWPTRANICLGTASGL 107
E + + LV +Y+ A S++K YV L L
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-------YMYQLFRSL 147
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHP-KIGDFGLAKLF---PDNVTHVSTRVAGTMG 163
+++H I HRDIK N+LLD + K+ DFG AK NV+ + +R
Sbjct: 148 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----- 199
Query: 164 YLAPEYAL-LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
Y APE T DV+S G +L E++ G+ G D L+ + ++
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 259
Query: 223 LEIVDPELTQF 233
E+ +P T+F
Sbjct: 260 REM-NPNYTEF 269
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 38/251 (15%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL---I 56
+IG G+FGVVY+ L D G +AIK + + + +E + ++ + H N+V+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 82
Query: 57 GCCVEDNNRI---LVYEYLENNSLANALLGSKSK------YVSLDWPTRANICLGTASGL 107
E + + LV +Y+ A S++K YV L L
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-------YMYQLFRSL 135
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHP-KIGDFGLAKLF---PDNVTHVSTRVAGTMG 163
+++H I HRDIK N+LLD + K+ DFG AK NV+ + +R
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----- 187
Query: 164 YLAPEYAL-LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
Y APE T DV+S G +L E++ G+ G D L+ + ++
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247
Query: 223 LEIVDPELTQF 233
E+ +P T+F
Sbjct: 248 REM-NPNYTEF 257
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSAE--SKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GAF VV R + G + A K ++ + S + ++ E + ++HPN+V+L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTA-SGLSFLHEEADPP 117
E+ LV++ + L ++ ++ Y D A+ C+ ++ H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIV-AREYYSEAD----ASHCIQQILESVNHCHLNG--- 123
Query: 118 IVHRDIKASNVLLDGNFH---PKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
IVHRD+K N+LL K+ DFGLA + AGT GYL+PE
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 175 LTKKADVYSFGVLLLEIISG 194
K D+++ GV+L ++ G
Sbjct: 183 YGKPVDMWACGVILYILLVG 202
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSAE--SKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G GAF VV R + G + A K ++ + S + ++ E + ++HPN+V+L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTA-SGLSFLHEEADPP 117
E+ LV++ + L ++ ++ Y D A+ C+ ++ H
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIV-AREYYSEAD----ASHCIQQILESVNHCHLNG--- 123
Query: 118 IVHRDIKASNVLLDGNFH---PKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
IVHRD+K N+LL K+ DFGLA + AGT GYL+PE
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 175 LTKKADVYSFGVLLLEIISG 194
K D+++ GV+L ++ G
Sbjct: 183 YGKPVDMWACGVILYILLVG 202
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 26/203 (12%)
Query: 2 IGGGAFGVVYRGSLRD---GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G G+FG V+R ++D G Q A+K + E + + E+ + P +V L G
Sbjct: 82 VGRGSFGEVHR--MKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGA 134
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTA-SGLSFLHEEADPP 117
E + E LE SL + K + RA LG A GL +LH
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALYYLGQALEGLEYLHTRR--- 186
Query: 118 IVHRDIKASNVLL--DGNFHPKIGDFGLA-KLFPDNVTH---VSTRVAGTMGYLAPEYAL 171
I+H D+KA NVLL DG+ + DFG A L PD + + GT ++APE +
Sbjct: 187 ILHGDVKADNVLLSSDGS-RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 245
Query: 172 LGQLTKKADVYSFGVLLLEIISG 194
K D++S ++L +++G
Sbjct: 246 GKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 26/203 (12%)
Query: 2 IGGGAFGVVYRGSLRD---GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G G+FG V+R ++D G Q A+K + E + + E+ + P +V L G
Sbjct: 66 VGRGSFGEVHR--MKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGA 118
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTA-SGLSFLHEEADPP 117
E + E LE SL + K + RA LG A GL +LH
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALYYLGQALEGLEYLHTRR--- 170
Query: 118 IVHRDIKASNVLL--DGNFHPKIGDFGLA-KLFPDNVTH---VSTRVAGTMGYLAPEYAL 171
I+H D+KA NVLL DG+ + DFG A L PD + + GT ++APE +
Sbjct: 171 ILHGDVKADNVLLSSDGS-RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 229
Query: 172 LGQLTKKADVYSFGVLLLEIISG 194
K D++S ++L +++G
Sbjct: 230 GKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 39/225 (17%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSA--------------------------ESKQGT 34
IG G++GVV + D T A+K LS + +
Sbjct: 21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80
Query: 35 KEFLTEIDMIWNIRHPNLVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWP 94
++ EI ++ + HPN+V+L+ ++D N +Y E + + K +S D
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEV-LDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED-- 137
Query: 95 TRANICL-GTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTH 153
+A G+ +LH + I+HRDIK SN+L+ + H KI DFG++ F +
Sbjct: 138 -QARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL 193
Query: 154 VSTRVAGTMGYLAPEYALLGQLT---KKADVYSFGVLLLEIISGR 195
+S V GT ++APE + K DV++ GV L + G+
Sbjct: 194 LSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 57 GC-----CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLH 111
+E+ + + L + +L+ + + LD + + G+ LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLCGIKHLH 143
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYAL 171
I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE L
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 172 LGQLTKKADVYSFGVLLLEIISG 194
+ D++S G ++ E+I G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 57 GC-----CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLH 111
+E+ + + L + +L+ + + LD + + G+ LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLCGIKHLH 143
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYAL 171
I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE L
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 172 LGQLTKKADVYSFGVLLLEIISG 194
+ D++S G ++ E+I G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 113/265 (42%), Gaps = 44/265 (16%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL---I 56
+IG G+FGVVY+ L D G +AIK + QG E+ ++ + H N+V+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 57 GCCVEDNNRI---LVYEYLENNSLANALLGSKSK------YVSLDWPTRANICLGTASGL 107
E + + LV +Y+ A S++K YV L L
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKL-------YMYQLFRSL 135
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHP-KIGDFGLAKLF---PDNVTHVSTRVAGTMG 163
+++H I HRDIK N+LLD + K+ DFG AK NV+ + +R
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----- 187
Query: 164 YLAPEYAL-LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDML--ILVEWTWKLREEG 220
Y APE T DV+S G +L E++ G+ G D L I+ RE+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247
Query: 221 RLL-----EIVDPELTQFPEKEVMR 240
R + E P++ P +V R
Sbjct: 248 REMNPNYTEFAFPQIKAHPWTKVFR 272
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 113/270 (41%), Gaps = 25/270 (9%)
Query: 2 IGGGAFGVVYRGSLRDGTQI-AIKCLSAE-SKQGTKEFLTEIDM-IWNIRHPNLVQLIGC 58
+G GA+GVV + QI A+K + A + Q K L ++D+ + P V G
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
+ + + E L + SL K ++ I + L LH + +
Sbjct: 102 LFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--V 158
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEY--ALLGQ-- 174
+HRD+K SNVL++ K DFG++ D+V AG Y APE L Q
Sbjct: 159 IHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID--AGCKPYXAPERINPELNQKG 216
Query: 175 LTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFP 234
+ K+D++S G+ +E+ R F D W ++ +++E P+L
Sbjct: 217 YSVKSDIWSLGITXIELAILR------FPYD-----SWGTPFQQLKQVVEEPSPQLPA-- 263
Query: 235 EKEVMRFIKVGLFCTQAGAHYRPTMKQVVE 264
+K F+ C + + RPT ++ +
Sbjct: 264 DKFSAEFVDFTSQCLKKNSKERPTYPELXQ 293
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 57 GC-----CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLH 111
+E+ + + L + +L+ + + LD + + G+ LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLCGIKHLH 143
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYAL 171
I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE L
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 172 LGQLTKKADVYSFGVLLLEIISG 194
+ D++S G ++ E+I G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 26/203 (12%)
Query: 2 IGGGAFGVVYRGSLRD---GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
+G G+FG V+R ++D G Q A+K + E + + E+ + P +V L G
Sbjct: 80 LGRGSFGEVHR--MKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGA 132
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTA-SGLSFLHEEADPP 117
E + E LE SL + K + RA LG A GL +LH
Sbjct: 133 VREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALYYLGQALEGLEYLHTRR--- 184
Query: 118 IVHRDIKASNVLL--DGNFHPKIGDFGLA-KLFPDNVTH---VSTRVAGTMGYLAPEYAL 171
I+H D+KA NVLL DG+ + DFG A L PD + + GT ++APE +
Sbjct: 185 ILHGDVKADNVLLSSDGS-RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 243
Query: 172 LGQLTKKADVYSFGVLLLEIISG 194
K D++S ++L +++G
Sbjct: 244 GKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 38/251 (15%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL---I 56
+IG G+FGVVY+ L D G +AIK + + + +E + ++ + H N+V+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFF 82
Query: 57 GCCVEDNNRI---LVYEYLENNSLANALLGSKSK------YVSLDWPTRANICLGTASGL 107
E + + LV +Y+ A S++K YV L L
Sbjct: 83 YSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-------YMYQLFRSL 135
Query: 108 SFLHEEADPPIVHRDIKASNVLLDGNFHP-KIGDFGLAKLF---PDNVTHVSTRVAGTMG 163
+++H I HRDIK N+LLD + K+ DFG AK NV+ + +R
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY----- 187
Query: 164 YLAPEYAL-LGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRL 222
Y APE T DV+S G +L E++ G+ G D L+ + ++
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247
Query: 223 LEIVDPELTQF 233
E+ +P T+F
Sbjct: 248 REM-NPNYTEF 257
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 85/198 (42%), Gaps = 16/198 (8%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G FGV + ++ ++ + EI ++RHPN+V+ +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGT-ASGLSFLHEEADPPIVH 120
+ +V EY L + + S D A SG+S+ H + H
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGR--FSED---EARFFFQQLISGVSYCHAMQ---VCH 138
Query: 121 RDIKASNVLLDGNFHP--KIGDFGLAKLFPDNVTHVSTR-VAGTMGYLAPEYALLGQLTK 177
RD+K N LLDG+ P KI FG +K +V H + GT Y+APE L +
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDG 195
Query: 178 K-ADVYSFGVLLLEIISG 194
K ADV+S GV L ++ G
Sbjct: 196 KVADVWSCGVTLYVMLVG 213
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 23/203 (11%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 57 GC-----CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLH 111
+E+ + + L + +L + + LD + + G+ LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLCGIKHLH 143
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYAL 171
I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE L
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 172 LGQLTKKADVYSFGVLLLEIISG 194
+ D++S G ++ E+I G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 23/203 (11%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 57 GC-----CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLH 111
+E+ + + L + +L + + LD + + G+ LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLCGIKHLH 143
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYAL 171
I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE L
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 172 LGQLTKKADVYSFGVLLLEIISG 194
+ D++S G ++ E+I G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 23/203 (11%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 33 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90
Query: 57 GC-----CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLH 111
+E+ + + L + +L + + LD + + G+ LH
Sbjct: 91 NVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLCGIKHLH 144
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYAL 171
I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE L
Sbjct: 145 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVIL 199
Query: 172 LGQLTKKADVYSFGVLLLEIISG 194
+ D++S G ++ E+I G
Sbjct: 200 GMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 85/198 (42%), Gaps = 16/198 (8%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVE 61
IG G FGV + ++ ++ + EI ++RHPN+V+ +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 62 DNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGT-ASGLSFLHEEADPPIVH 120
+ +V EY L + + S D A SG+S+ H + H
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGR--FSED---EARFFFQQLISGVSYCHAMQ---VCH 138
Query: 121 RDIKASNVLLDGNFHP--KIGDFGLAKLFPDNVTHVSTR-VAGTMGYLAPEYALLGQLTK 177
RD+K N LLDG+ P KI FG +K +V H + GT Y+APE L +
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDTVGTPAYIAPEVLLKKEYDG 195
Query: 178 K-ADVYSFGVLLLEIISG 194
K ADV+S GV L ++ G
Sbjct: 196 KVADVWSCGVTLYVMLVG 213
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 57 GC-----CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLH 111
+E+ + + L + +L+ + + LD + + G+ LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLVGIKHLH 143
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYAL 171
I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE L
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 172 LGQLTKKADVYSFGVLLLEIISG 194
+ D++S G ++ E+I G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCL----SAESKQGT--KEFLTEIDMIWNIRHPNLVQ 54
+G G F VV + + G Q A K + + S++G ++ E+ ++ I+HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + IL+ E + L + L +S L +G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLH--- 131
Query: 115 DPPIVHRDIKASNV-LLDGNF---HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I H D+K N+ LLD N KI DFGLA + + + GT ++APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPAFVAPEIV 189
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRS 196
L +AD++S GV+ ++SG S
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 22/203 (10%)
Query: 2 IGGGAFGVVYR------GSLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+G GAF VV R G I K LSA Q + E + ++HPN+V+L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLER---EARICRLLKHPNIVRL 75
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTA-SGLSFLHEEA 114
E+ + L+++ + L ++ ++ Y D A+ C+ + H+
Sbjct: 76 HDSISEEGHHYLIFDLVTGGELFEDIV-AREYYSEAD----ASHCIQQILEAVLHCHQMG 130
Query: 115 DPPIVHRDIKASNVLLDGNFH---PKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYAL 171
+VHR++K N+LL K+ DFGLA + + AGT GYL+PE
Sbjct: 131 ---VVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLR 186
Query: 172 LGQLTKKADVYSFGVLLLEIISG 194
K D+++ GV+L ++ G
Sbjct: 187 KDPYGKPVDLWACGVILYILLVG 209
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCL----SAESKQGT--KEFLTEIDMIWNIRHPNLVQ 54
+G G F VV + + G Q A K + + S++G ++ E+ ++ I+HPN++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + IL+ E + L + L +S L +G+ +LH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHSLQ 133
Query: 115 DPPIVHRDIKASNV-LLDGNF---HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I H D+K N+ LLD N KI DFGLA + + + GT ++APE
Sbjct: 134 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIV 188
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRS 196
L +AD++S GV+ ++SG S
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGAS 214
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCL----SAESKQGT--KEFLTEIDMIWNIRHPNLVQ 54
+G G F VV + + G Q A K + + S++G ++ E+ ++ I+HPN++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + IL+ E + L + L +S L +G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 115 DPPIVHRDIKASNV-LLDGNF---HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I H D+K N+ LLD N KI DFGLA + + + GT ++APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRS 196
L +AD++S GV+ ++SG S
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCL----SAESKQGT--KEFLTEIDMIWNIRHPNLVQ 54
+G G F VV + + G Q A K + + S++G ++ E+ ++ I+HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + IL+ E + L + L +S L +G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 115 DPPIVHRDIKASNV-LLDGNF---HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I H D+K N+ LLD N KI DFGLA + + + GT ++APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRS 196
L +AD++S GV+ ++SG S
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCL----SAESKQGT--KEFLTEIDMIWNIRHPNLVQ 54
+G G F VV + + G Q A K + + S++G ++ E+ ++ I+HPN++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + IL+ E + L + L +S L +G+ +LH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHSLQ 133
Query: 115 DPPIVHRDIKASNV-LLDGNF---HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I H D+K N+ LLD N KI DFGLA + + + GT ++APE
Sbjct: 134 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIV 188
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRS 196
L +AD++S GV+ ++SG S
Sbjct: 189 NYEPLGLEADMWSIGVITYILLSGAS 214
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCL----SAESKQGT--KEFLTEIDMIWNIRHPNLVQ 54
+G G F VV + + G Q A K + + S++G ++ E+ ++ I+HPN++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + IL+ E + L + L +S L +G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 115 DPPIVHRDIKASNV-LLDGNF---HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I H D+K N+ LLD N KI DFGLA + + + GT ++APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRS 196
L +AD++S GV+ ++SG S
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCL----SAESKQGT--KEFLTEIDMIWNIRHPNLVQ 54
+G G F VV + + G Q A K + + S++G ++ E+ ++ I+HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + IL+ E + L + L +S L +G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLH--- 131
Query: 115 DPPIVHRDIKASNV-LLDGNF---HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I H D+K N+ LLD N KI DFGLA + + + GT ++APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRS 196
L +AD++S GV+ ++SG S
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCL----SAESKQGT--KEFLTEIDMIWNIRHPNLVQ 54
+G G F VV + + G Q A K + + S++G ++ E+ ++ I+HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + IL+ E + L + L +S L +G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLH--- 131
Query: 115 DPPIVHRDIKASNV-LLDGNF---HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I H D+K N+ LLD N KI DFGLA + + + GT ++APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRS 196
L +AD++S GV+ ++SG S
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCL----SAESKQGT--KEFLTEIDMIWNIRHPNLVQ 54
+G G F VV + + G Q A K + + S++G ++ E+ ++ I+HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + IL+ E + L + L +S L +G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLH--- 131
Query: 115 DPPIVHRDIKASNV-LLDGNF---HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I H D+K N+ LLD N KI DFGLA + + + GT ++APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRS 196
L +AD++S GV+ ++SG S
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCL----SAESKQGT--KEFLTEIDMIWNIRHPNLVQ 54
+G G F VV + + G Q A K + + S++G ++ E+ ++ I+HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + IL+ E + L + L +S L +G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLH--- 131
Query: 115 DPPIVHRDIKASNV-LLDGNF---HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I H D+K N+ LLD N KI DFGLA + + + GT ++APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRS 196
L +AD++S GV+ ++SG S
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCL----SAESKQGT--KEFLTEIDMIWNIRHPNLVQ 54
+G G F VV + + G Q A K + + S++G ++ E+ ++ I+HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + IL+ E + L + L +S L +G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLH--- 131
Query: 115 DPPIVHRDIKASNV-LLDGNF---HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I H D+K N+ LLD N KI DFGLA + + + GT ++APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRS 196
L +AD++S GV+ ++SG S
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 23/203 (11%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 34 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 91
Query: 57 GC-----CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLH 111
+E+ + + L + +L + + LD + + G+ LH
Sbjct: 92 NVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLCGIKHLH 145
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYAL 171
I+HRD+K SN+++ + KI DFGLA+ + V V T Y APE L
Sbjct: 146 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVV--TRYYRAPEVIL 200
Query: 172 LGQLTKKADVYSFGVLLLEIISG 194
+ D++S G ++ E+I G
Sbjct: 201 GMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 23/203 (11%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 57 GC-----CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLH 111
+E+ + + L + +L + + LD + + G+ LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLCGIKHLH 143
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYAL 171
I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE L
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPEVVTRYYRAPEVIL 198
Query: 172 LGQLTKKADVYSFGVLLLEIISG 194
+ D++S G ++ E+I G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYV---SLDWPTRANICLGTASGLSFLHEE 113
E ++ L L+ + V LD + + G+ LH
Sbjct: 90 NVFTPQKT----LEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA 145
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG 173
I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE L
Sbjct: 146 G---IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 174 QLTKKADVYSFGVLLLEIISGR 195
+ D++S G ++ E++ +
Sbjct: 201 GYKENVDIWSVGCIMGEMVRHK 222
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCL----SAESKQGT--KEFLTEIDMIWNIRHPNLVQ 54
+G G F VV + + G Q A K + + S++G ++ E+ ++ I+HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + IL+ E + L + L ++ SL +G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 115 DPPIVHRDIKASNV-LLDGNF---HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I H D+K N+ LLD N KI DFGLA + + + GT ++APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRS 196
L +AD++S GV+ ++SG S
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCL----SAESKQGT--KEFLTEIDMIWNIRHPNLVQ 54
+G G F VV + + G Q A K + + S++G ++ E+ ++ I+HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + IL+ E + L + L +S L +G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLH--- 131
Query: 115 DPPIVHRDIKASNV-LLDGNF---HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I H D+K N+ LLD N KI DFGLA + + + GT ++APE
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRS 196
L +AD++S GV+ ++SG S
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYV---SLDWPTRANICLGTASGLSFLHEE 113
E ++ L L+ + V LD + + G+ LH
Sbjct: 90 NVFTPQKT----LEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG 173
I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE L
Sbjct: 146 G---IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 174 QLTKKADVYSFGVLLLEIISGR 195
+ D++S G ++ E++ +
Sbjct: 201 GYKENVDIWSVGCIMGEMVRHK 222
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 57 GCCV------EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFL 110
E + LV E ++ N L + + LD + + G+ L
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDAN-LCQVI------QMELDHERMSYLLYQMLCGIKHL 142
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
H I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 197
Query: 171 LLGQLTKKADVYSFGVLLLEIISGR 195
L + D++S G ++ E++ +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 114/279 (40%), Gaps = 36/279 (12%)
Query: 2 IGGGAFGVVYRGSLRD--------GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLV 53
+G G F +++G R+ T++ +K L + ++ F M+ + H +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 54 QLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE 113
G CV + ILV E+++ SL L +K+ +++ W + + A+ + FL E
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKN-CINILW--KLEVAKQLAAAMHFLEEN 132
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHV---STRVAGTMGYLAPE-Y 169
++H ++ A N+LL K G+ KL ++ + + ++ PE
Sbjct: 133 T---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECI 189
Query: 170 ALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLR-EEGRLLEIVDP 228
L D +SFG L EI SG GD L ++ KL+ E R
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSG--------GDKPLSALDSQRKLQFYEDR------- 234
Query: 229 ELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
Q P + + C +RP+ + ++ L+
Sbjct: 235 --HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLN 271
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 16/200 (8%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSAE--SKQGTKEFLTEIDMIWNIRHPNLVQLIGC 58
IG GAF VV R L G + A K ++ + S + ++ E + ++H N+V+L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTA-SGLSFLHEEADPP 117
E+ LV++ + L ++ ++ Y D A+ C+ + H+
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIV-AREYYSEAD----ASHCIQQILEAVLHCHQMG--- 123
Query: 118 IVHRDIKASNVLLDGNFH---PKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQ 174
+VHRD+K N+LL K+ DFGLA + AGT GYL+PE
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKEA 182
Query: 175 LTKKADVYSFGVLLLEIISG 194
K D+++ GV+L ++ G
Sbjct: 183 YGKPVDIWACGVILYILLVG 202
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIKCL----SAESKQGT--KEFLTEIDMIWNIRHPNLVQ 54
+G G F VV + + G Q A K + + S++G ++ E+ ++ I+HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 55 LIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEA 114
L + IL+ E + L + L +S L +G+ +LH
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVYYLHSLQ 134
Query: 115 DPPIVHRDIKASNV-LLDGNF---HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
I H D+K N+ LLD N KI DFGLA + + + GT ++APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIV 189
Query: 171 LLGQLTKKADVYSFGVLLLEIISGRS 196
L +AD++S GV+ ++SG S
Sbjct: 190 NYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYV---SLDWPTRANICLGTASGLSFLHEE 113
E ++ L L+ + V LD + + G+ LH
Sbjct: 83 NVFTPQKT----LEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA 138
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG 173
I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE L
Sbjct: 139 G---IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM 193
Query: 174 QLTKKADVYSFGVLLLEIISGR 195
+ D++S G ++ E++ +
Sbjct: 194 GYKENVDIWSVGCIMGEMVRHK 215
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 57 GCCVEDNNRILVYEYLENNSLANALLGSKSKYV---SLDWPTRANICLGTASGLSFLHEE 113
E ++ L L+ + V LD + + G+ LH
Sbjct: 90 NVFTPQKT----LEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA 145
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLG 173
I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE L
Sbjct: 146 G---IIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 174 QLTKKADVYSFGVLLLEIISGR 195
+ D++S G ++ E++ +
Sbjct: 201 GYKENVDIWSVGCIMGEMVRHK 222
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 14/200 (7%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ-----IAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+G G F + S D + I K L + Q K + EI + ++ H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGF 82
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G EDN+ + V L +LL + +L P G +LH
Sbjct: 83 HGF-FEDNDFVFVVLEL---CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR- 137
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
++HRD+K N+ L+ + KIGDFGLA + T + GT Y+APE
Sbjct: 138 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGH 194
Query: 176 TKKADVYSFGVLLLEIISGR 195
+ + DV+S G ++ ++ G+
Sbjct: 195 SFEVDVWSIGCIMYTLLVGK 214
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 57 GCCV------EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFL 110
E + LV E ++ N L + + LD + + G+ L
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDAN-LCQVI------QMELDHERMSYLLYQMLCGIKHL 142
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
H I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 197
Query: 171 LLGQLTKKADVYSFGVLLLEIISGR 195
L + D++S G ++ E++ +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 57 GCCV------EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFL 110
E + LV E ++ N L + + LD + + G+ L
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDAN-LCQVI------QMELDHERMSYLLYQMLCGIKHL 143
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
H I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE
Sbjct: 144 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 198
Query: 171 LLGQLTKKADVYSFGVLLLEIISGR 195
L + D++S G ++ E++ +
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 17/227 (7%)
Query: 2 IGGGAFGVVYRGSLRDGTQI--AIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCC 59
IG G++G V + +++ GT+I A K + + F EI+++ ++ HPN+++L
Sbjct: 17 IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 75
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
++ + LV E L ++ + S A I S +++ H+ +
Sbjct: 76 EDNTDIYLVMELCTGGELFERVVHKRVFRES----DAARIMKDVLSAVAYCHKLN---VA 128
Query: 120 HRDIKASNVLL--DGNFHP-KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
HRD+K N L D P K+ DFGLA F + T+V GT Y++P+ L G
Sbjct: 129 HRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG-KMMRTKV-GTPYYVSPQ-VLEGLYG 185
Query: 177 KKADVYSFGVLLLEIISGRSSSKAAFGDD-MLILVEWTWKLREEGRL 222
+ D +S GV++ ++ G A + ML + E T+ E+ L
Sbjct: 186 PECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWL 232
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 57 GCCV------EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFL 110
E + LV E ++ N L + + LD + + G+ L
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDAN-LCQVI------QMELDHERMSYLLYQMLCGIKHL 142
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
H I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE
Sbjct: 143 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 197
Query: 171 LLGQLTKKADVYSFGVLLLEIISGR 195
L + D++S G ++ E++ +
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 14/200 (7%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ-----IAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+G G F + S D + I K L + Q K + EI + ++ H ++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGF 86
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G EDN+ + V L +LL + +L P G +LH
Sbjct: 87 HGF-FEDNDFVFVVLEL---CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR- 141
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
++HRD+K N+ L+ + KIGDFGLA + T + GT Y+APE
Sbjct: 142 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGH 198
Query: 176 TKKADVYSFGVLLLEIISGR 195
+ + DV+S G ++ ++ G+
Sbjct: 199 SFEVDVWSIGCIMYTLLVGK 218
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 57 GCCV------EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFL 110
E + LV E ++ N L + + LD + + G+ L
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDAN-LCQVI------QMELDHERMSYLLYQMLCGIKHL 143
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
H I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE
Sbjct: 144 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 198
Query: 171 LLGQLTKKADVYSFGVLLLEIISGR 195
L + D++S G ++ E++ +
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 31 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 57 GCCV------EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFL 110
E + LV E ++ N L + + LD + + G+ L
Sbjct: 89 NVFTPQKTLEEFQDVYLVMELMDAN-LCQVI------QMELDHERMSYLLYQMLCGIKHL 141
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
H I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE
Sbjct: 142 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 196
Query: 171 LLGQLTKKADVYSFGVLLLEIISGR 195
L + D++S G ++ E++ +
Sbjct: 197 LGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 14/200 (7%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ-----IAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+G G F + S D + I K L + Q K + EI + ++ H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGF 82
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G EDN+ + V L +LL + +L P G +LH
Sbjct: 83 HGF-FEDNDFVFVVLEL---CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR- 137
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
++HRD+K N+ L+ + KIGDFGLA + T + GT Y+APE
Sbjct: 138 --VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGH 194
Query: 176 TKKADVYSFGVLLLEIISGR 195
+ + DV+S G ++ ++ G+
Sbjct: 195 SFEVDVWSIGCIMYTLLVGK 214
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 20/203 (9%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ-----IAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+G G F + S D + I K L + Q K + EI + ++ H ++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGF 80
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G EDN+ + V L +LL + +L P G +LH
Sbjct: 81 HGF-FEDNDFVFVVLELCRR---RSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR- 135
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTR---VAGTMGYLAPEYALL 172
++HRD+K N+ L+ + KIGDFGLA V + R + GT Y+APE
Sbjct: 136 --VIHRDLKLGNLFLNEDLEVKIGDFGLA----TKVEYDGERKKVLCGTPNYIAPEVLSK 189
Query: 173 GQLTKKADVYSFGVLLLEIISGR 195
+ + DV+S G ++ ++ G+
Sbjct: 190 KGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 17/227 (7%)
Query: 2 IGGGAFGVVYRGSLRDGTQI--AIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCC 59
IG G++G V + +++ GT+I A K + + F EI+++ ++ HPN+++L
Sbjct: 34 IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 92
Query: 60 VEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIV 119
++ + LV E L ++ + S A I S +++ H+ +
Sbjct: 93 EDNTDIYLVMELCTGGELFERVVHKRVFRES----DAARIMKDVLSAVAYCHKLN---VA 145
Query: 120 HRDIKASNVLL--DGNFHP-KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
HRD+K N L D P K+ DFGLA F + T+V GT Y++P+ L G
Sbjct: 146 HRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG-KMMRTKV-GTPYYVSPQ-VLEGLYG 202
Query: 177 KKADVYSFGVLLLEIISGRSSSKAAFGDD-MLILVEWTWKLREEGRL 222
+ D +S GV++ ++ G A + ML + E T+ E+ L
Sbjct: 203 PECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWL 249
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 57 GCCV------EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFL 110
E + LV E ++ N L + + LD + + G+ L
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDAN-LCQVI------QMELDHERMSYLLYQMLCGIKHL 135
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
H I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE
Sbjct: 136 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 190
Query: 171 LLGQLTKKADVYSFGVLLLEIISGR 195
L + D++S G ++ E++ +
Sbjct: 191 LGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 57 GCCV------EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFL 110
E + LV E ++ N L + + LD + + G+ L
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDAN-LCQVI------QMELDHERMSYLLYQMLCGIKHL 136
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
H I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE
Sbjct: 137 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 191
Query: 171 LLGQLTKKADVYSFGVLLLEIISGR 195
L + D++S G ++ E++ +
Sbjct: 192 LGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 57 GCCV------EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFL 110
E + LV E ++ N L + + LD + + G+ L
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDAN-LCQVI------QMELDHERMSYLLYQMLCGIKHL 136
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
H I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE
Sbjct: 137 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 191
Query: 171 LLGQLTKKADVYSFGVLLLEIISGR 195
L + D++S G ++ E++ +
Sbjct: 192 LGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 20/203 (9%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ-----IAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+G G F + S D + I K L + Q K + EI + ++ H ++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGF 104
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G EDN+ + V L +LL + +L P G +LH
Sbjct: 105 HGF-FEDNDFVFVVLEL---CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR- 159
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTR---VAGTMGYLAPEYALL 172
++HRD+K N+ L+ + KIGDFGLA V + R + GT Y+APE
Sbjct: 160 --VIHRDLKLGNLFLNEDLEVKIGDFGLA----TKVEYDGERKKVLCGTPNYIAPEVLSK 213
Query: 173 GQLTKKADVYSFGVLLLEIISGR 195
+ + DV+S G ++ ++ G+
Sbjct: 214 KGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 20/203 (9%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ-----IAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQL 55
+G G F + S D + I K L + Q K + EI + ++ H ++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGF 106
Query: 56 IGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEAD 115
G EDN+ + V L +LL + +L P G +LH
Sbjct: 107 HGF-FEDNDFVFVVLEL---CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR- 161
Query: 116 PPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTR---VAGTMGYLAPEYALL 172
++HRD+K N+ L+ + KIGDFGLA V + R + GT Y+APE
Sbjct: 162 --VIHRDLKLGNLFLNEDLEVKIGDFGLA----TKVEYDGERKKVLCGTPNYIAPEVLSK 215
Query: 173 GQLTKKADVYSFGVLLLEIISGR 195
+ + DV+S G ++ ++ G+
Sbjct: 216 KGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQG-TKEFLTEIDMIWNIRHPNLVQLIGCCV 60
+G G +G VY+ +DG L G + EI ++ ++HPN++ L +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 61 EDNNR--ILVYEYLENN--SLANALLGSKS--KYVSLDWPTRANICLGTASGLSFLHEEA 114
+R L+++Y E++ + SK+ K V L ++ G+ +LH
Sbjct: 89 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW 148
Query: 115 DPPIVHRDIKASNVLLDGN----FHPKIGDFGLAKLFPDNVTHVS--TRVAGTMGYLAPE 168
++HRD+K +N+L+ G KI D G A+LF + ++ V T Y APE
Sbjct: 149 ---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPE 205
Query: 169 YALLG--QLTKKADVYSFGVLLLEIISG 194
LLG TK D+++ G + E+++
Sbjct: 206 -LLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 57 GCCV------EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFL 110
E + LV E ++ N L + + LD + + G+ L
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDAN-LCQVI------QMELDHERMSYLLYQMLCGIKHL 180
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
H I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE
Sbjct: 181 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 235
Query: 171 LLGQLTKKADVYSFGVLLLEIISGR 195
L + D++S G ++ E++ +
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 57 GCCV------EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFL 110
E + LV E ++ N L + + LD + + G+ L
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDAN-LCQVI------QMELDHERMSYLLYQMLCGIKHL 180
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
H I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE
Sbjct: 181 HSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 235
Query: 171 LLGQLTKKADVYSFGVLLLEIISGR 195
L + D++S G ++ E++ +
Sbjct: 236 LGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 18/114 (15%)
Query: 98 NICLGTASGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKL----------- 146
+I + A + FLH + ++HRD+K SN+ + K+GDFGL
Sbjct: 168 HIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 147 --FPDNVTHVSTRVAGTMGYLAPEYALLGQLTKKADVYSFGVLLLEIISGRSSS 198
P TH GT Y++PE + K D++S G++L E++ S+
Sbjct: 225 TPMPAYATHXGQ--VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQ 276
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 104/246 (42%), Gaps = 60/246 (24%)
Query: 2 IGGGAFGVVYRGSLRDGTQIAIKCLSAESKQGTKEF--------LTEIDMIWNIRHPNLV 53
IG G++GVV R ++ + T+ AI+ + +K ++ TE+ ++ + HPN+
Sbjct: 34 IGQGSYGVV-RVAIENQTR-AIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIA 91
Query: 54 QLIGCCVEDNNRILVYEYLENNSLAN-------------------------------ALL 82
+L ++ LV E L + A+
Sbjct: 92 RLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAIN 151
Query: 83 GSKSKYV-SLDWPTR----ANICLGTASGLSFLHEEADPPIVHRDIKASNVLLDGN--FH 135
GS + SLD+ R +NI S L +LH + I HRDIK N L N F
Sbjct: 152 GSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG---ICHRDIKPENFLFSTNKSFE 208
Query: 136 PKIGDFGLAKLF---PDNVTHVSTRVAGTMGYLAPEYALLGQLTK----KADVYSFGVLL 188
K+ DFGL+K F + + T AGT ++APE +L + K D +S GVLL
Sbjct: 209 IKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPE--VLNTTNESYGPKCDAWSAGVLL 266
Query: 189 LEIISG 194
++ G
Sbjct: 267 HLLLMG 272
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 18/199 (9%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG G++ V R + + A+K + + T+E EI + + +HPN++ L
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEI--EILLRYG-QHPNIITLKDVYD 86
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASG-LSFLHEEADPPIV 119
+ +V E ++ L + +L + K+ S A+ L T + + +LH + +V
Sbjct: 87 DGKYVYVVTELMKGGELLDKIL--RQKFFS---EREASAVLFTITKTVEYLHAQG---VV 138
Query: 120 HRDIKASNVL-LDGNFHP---KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
HRD+K SN+L +D + +P +I DFG AK + T T ++APE
Sbjct: 139 HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLERQGY 197
Query: 176 TKKADVYSFGVLLLEIISG 194
D++S GVLL +++G
Sbjct: 198 DAACDIWSLGVLLYTMLTG 216
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 23/204 (11%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 37 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 94
Query: 57 GC-----CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLH 111
+E+ + + L + +L + + LD + + G+ LH
Sbjct: 95 NVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLCGIKHLH 148
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYAL 171
I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE L
Sbjct: 149 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVIL 203
Query: 172 LGQLTKKADVYSFGVLLLEIISGR 195
+ D++S G ++ E++ +
Sbjct: 204 GMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 88/208 (42%), Gaps = 24/208 (11%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQIAIKCLSAESKQGTKEF------LTEIDMIWNIR----H 49
++G G FG V+ G L D Q+AIK + G E+ ++W + H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 50 PNLVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSL-DWPTRANICLGTASGLS 108
P +++L+ +LV LE A L ++ L + P+R A+ +
Sbjct: 98 PGVIRLLDWFETQEGFMLV---LERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAA-IQ 153
Query: 109 FLHEEADPPIVHRDIKASNVLLD-GNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAP 167
H +VHRDIK N+L+D K+ DFG L D T GT Y P
Sbjct: 154 HCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY---TDFDGTRVYSPP 207
Query: 168 EYALLGQLTK-KADVYSFGVLLLEIISG 194
E+ Q A V+S G+LL +++ G
Sbjct: 208 EWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 22/210 (10%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF-LTEIDMIWNIRHPNLVQLIGC 58
++G GA V+RG + G AIK + S + + E +++ + H N+V+L
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 59 CVEDNNR--ILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
E R +L+ E+ SL L + Y L + G++ L E
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAY-GLPESEFLIVLRDVVGGMNHLRENG-- 132
Query: 117 PIVHRDIKASNVLL----DGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAP---EY 169
IVHR+IK N++ DG K+ DFG A+ D+ VS + GT YL P E
Sbjct: 133 -IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHPDMYER 189
Query: 170 ALLGQLTKK-----ADVYSFGVLLLEIISG 194
A+L + +K D++S GV +G
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 23/204 (11%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 26 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 83
Query: 57 GC-----CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLH 111
+E+ + + L + +L + + LD + + G+ LH
Sbjct: 84 NVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLCGIKHLH 137
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYAL 171
I+HRD+K SN+++ + KI DFGLA+ + + T T Y APE L
Sbjct: 138 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVIL 192
Query: 172 LGQLTKKADVYSFGVLLLEIISGR 195
+ D++S G ++ E++ +
Sbjct: 193 GMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 44/230 (19%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ-IAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIG 57
+IG G++G VY ++ + +AIK ++ E K L EI ++ ++ +++L
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYD 92
Query: 58 CCVEDNNRIL--VYEYLENNSLANALLGSKSKY-VSLDWPTRANICLGTASGLSFLHEEA 114
+ D+ +Y LE +A++ L K + L I G +F+HE
Sbjct: 93 LIIPDDLLKFDELYIVLE---IADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESG 149
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF-------------------PDN----- 150
I+HRD+K +N LL+ + K+ DFGLA+ P N
Sbjct: 150 ---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKK 206
Query: 151 --VTHVSTRVAGTMGYLAPEYALLGQ-LTKKADVYSFGVLLLEIISGRSS 197
+HV TR Y APE LL + TK D++S G + E+++ S
Sbjct: 207 QLTSHVVTR-----WYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 18/199 (9%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG G++ R + + A+K + + ++E EI + + +HPN++ L
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEI--EILLRYG-QHPNIITLKDVYD 91
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGT-ASGLSFLHEEADPPIV 119
+ + LV E + L + +L + K+ S A+ L T + +LH + +V
Sbjct: 92 DGKHVYLVTELMRGGELLDKIL--RQKFFS---EREASFVLHTIGKTVEYLHSQG---VV 143
Query: 120 HRDIKASNVL-LDGNFHP---KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
HRD+K SN+L +D + +P +I DFG AK + T T ++APE
Sbjct: 144 HRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGY 202
Query: 176 TKKADVYSFGVLLLEIISG 194
+ D++S G+LL +++G
Sbjct: 203 DEGCDIWSLGILLYTMLAG 221
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 112/279 (40%), Gaps = 36/279 (12%)
Query: 2 IGGGAFGVVYRGSLRD--------GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLV 53
+G G F +++G R+ T++ +K L + ++ F M+ + H +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 54 QLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE 113
G C + ILV E+++ SL L +K+ +++ W + + A + FL E
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKN-CINILW--KLEVAKQLAWAMHFLEEN 132
Query: 114 ADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHV---STRVAGTMGYLAPE-Y 169
++H ++ A N+LL K G+ KL ++ + + ++ PE
Sbjct: 133 T---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECI 189
Query: 170 ALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLR-EEGRLLEIVDP 228
L D +SFG L EI SG GD L ++ KL+ E R
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSG--------GDKPLSALDSQRKLQFYEDR------- 234
Query: 229 ELTQFPEKEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLS 267
Q P + + C +RP+ + ++ L+
Sbjct: 235 --HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLN 271
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 18/199 (9%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG G++ R + + A+K + + ++E EI + + +HPN++ L
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEI--EILLRYG-QHPNIITLKDVYD 91
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGT-ASGLSFLHEEADPPIV 119
+ + LV E + L + +L + K+ S A+ L T + +LH + +V
Sbjct: 92 DGKHVYLVTELMRGGELLDKIL--RQKFFS---EREASFVLHTIGKTVEYLHSQG---VV 143
Query: 120 HRDIKASNVL-LDGNFHP---KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
HRD+K SN+L +D + +P +I DFG AK + T T ++APE
Sbjct: 144 HRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGY 202
Query: 176 TKKADVYSFGVLLLEIISG 194
+ D++S G+LL +++G
Sbjct: 203 DEGCDIWSLGILLYTMLAG 221
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 61/241 (25%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCL---SAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G G+ G VV++GS + G +A+K + + + LTE D HPN+++
Sbjct: 40 ILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVIRYY 93
Query: 57 GCCVEDNNRIL----------VYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASG 106
C E +R L + + +E+ ++++ L + +Y + ++ ASG
Sbjct: 94 --CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI------SLLRQIASG 145
Query: 107 LSFLHEEADPPIVHRDIKASNVLLDG-------------NFHPKIGDFGLAK-------L 146
++ LH I+HRD+K N+L+ N I DFGL K
Sbjct: 146 VAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 147 FPDNVTHVSTRVAGTMGYLAPEY---ALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFG 203
F N+ + S GT G+ APE + +LT+ D++S G + I+ S K FG
Sbjct: 203 FRXNLNNPS----GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYIL---SKGKHPFG 255
Query: 204 D 204
D
Sbjct: 256 D 256
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 61/241 (25%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCL---SAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G G+ G VV++GS + G +A+K + + + LTE D HPN+++
Sbjct: 40 ILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVIRYY 93
Query: 57 GCCVEDNNRIL----------VYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASG 106
C E +R L + + +E+ ++++ L + +Y + ++ ASG
Sbjct: 94 --CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI------SLLRQIASG 145
Query: 107 LSFLHEEADPPIVHRDIKASNVLLDG-------------NFHPKIGDFGLAK-------L 146
++ LH I+HRD+K N+L+ N I DFGL K
Sbjct: 146 VAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 147 FPDNVTHVSTRVAGTMGYLAPEY---ALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFG 203
F N+ + S GT G+ APE + +LT+ D++S G + I+ S K FG
Sbjct: 203 FRXNLNNPS----GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYIL---SKGKHPFG 255
Query: 204 D 204
D
Sbjct: 256 D 256
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 80/209 (38%), Gaps = 18/209 (8%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQG-----------TKEFLTEIDMIWNIRH 49
I G++G V G +G +AIK + G K L EI ++ + H
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 50 PNLVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL-GTASGLS 108
PN++ L V + YL + L + P + GL
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 109 FLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPE 168
LHE +VHRD+ N+LL N I DF LA+ D T Y APE
Sbjct: 149 VLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR--EDTADANKTHYVTHRWYRAPE 203
Query: 169 YAL-LGQLTKKADVYSFGVLLLEIISGRS 196
+ TK D++S G ++ E+ + ++
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 80/209 (38%), Gaps = 18/209 (8%)
Query: 1 MIGGGAFGVVYRGSLRDGTQIAIKCLSAESKQG-----------TKEFLTEIDMIWNIRH 49
I G++G V G +G +AIK + G K L EI ++ + H
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 50 PNLVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICL-GTASGLS 108
PN++ L V + YL + L + P + GL
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLH 148
Query: 109 FLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPE 168
LHE +VHRD+ N+LL N I DF LA+ D T Y APE
Sbjct: 149 VLHEAG---VVHRDLHPGNILLADNNDITICDFNLAR--EDTADANKTHYVTHRWYRAPE 203
Query: 169 YAL-LGQLTKKADVYSFGVLLLEIISGRS 196
+ TK D++S G ++ E+ + ++
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 57/241 (23%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCL---SAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G G+ G VV++GS + G +A+K + + + LTE D HPN+++
Sbjct: 22 ILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVIRYY 75
Query: 57 GCCVEDNNRIL----------VYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASG 106
C E +R L + + +E+ ++++ L + +Y + ++ ASG
Sbjct: 76 --CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI------SLLRQIASG 127
Query: 107 LSFLHEEADPPIVHRDIKASNVLLDG-------------NFHPKIGDFGLAKLFPDNVTH 153
++ LH I+HRD+K N+L+ N I DFGL K +
Sbjct: 128 VAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSS 184
Query: 154 VSTRV---AGTMGYLAPE-------YALLGQLTKKADVYSFGVLLLEIISGRSSSKAAFG 203
T + +GT G+ APE +LT+ D++S G + I+ S K FG
Sbjct: 185 FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL---SKGKHPFG 241
Query: 204 D 204
D
Sbjct: 242 D 242
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 18/199 (9%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGCCV 60
IG G++ V R + + A+K + + T+E EI + + +HPN++ L
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEI--EILLRYG-QHPNIITLKDVYD 86
Query: 61 EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASG-LSFLHEEADPPIV 119
+ +V E + L + +L + K+ S A+ L T + + +LH + +V
Sbjct: 87 DGKYVYVVTELXKGGELLDKIL--RQKFFS---EREASAVLFTITKTVEYLHAQG---VV 138
Query: 120 HRDIKASNVL-LDGNFHP---KIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQL 175
HRD+K SN+L +D + +P +I DFG AK + T T ++APE
Sbjct: 139 HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TANFVAPEVLERQGY 197
Query: 176 TKKADVYSFGVLLLEIISG 194
D++S GVLL ++G
Sbjct: 198 DAACDIWSLGVLLYTXLTG 216
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 57 GC-----CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLH 111
+E+ + + L + +L + + LD + + G+ LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLCGIKHLH 143
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYAL 171
I+HRD+K SN+++ + KI DFGLA+ + + T Y APE L
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRYYRAPEVIL 198
Query: 172 LGQLTKKADVYSFGVLLLEIISGR 195
+ D++S G ++ E++ +
Sbjct: 199 GMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 118/273 (43%), Gaps = 41/273 (15%)
Query: 8 GVVYRGSLRDGTQIAIKCLSAE--SKQGTKEFLTEIDMIWNIRHPNLVQLIGCCVED--N 63
G +++G + G I +K L S + +++F E + HPN++ ++G C
Sbjct: 24 GELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 64 NRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPIVHRDI 123
+ L+ ++ SL N +L + +V +D L A G++FLH +P I +
Sbjct: 83 HPTLITHWMPYGSLYN-VLHEGTNFV-VDQSQAVKFALDMARGMAFLH-TLEPLIPRHAL 139
Query: 124 KASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK----- 178
+ +V++D + +I +A + S + G M AP + L KK
Sbjct: 140 NSRSVMIDEDMTARI---SMADV------KFSFQSPGRM--YAPAWVAPEALQKKPEDTN 188
Query: 179 ---ADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEIVDPELTQFPE 235
AD++SF VLL E++ + + F D L +E K+ EG L + P ++
Sbjct: 189 RRSADMWSFAVLLWELV----TREVPFAD--LSNMEIGMKVALEG-LRPTIPPGIS---- 237
Query: 236 KEVMRFIKVGLFCTQAGAHYRPTMKQVVEMLSK 268
V + +K+ C RP +V +L K
Sbjct: 238 PHVSKLMKI---CMNEDPAKRPKFDMIVPILEK 267
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEF-LTEIDMIWNIRHPNLVQLIGC 58
++G GA V+RG + G AIK + S + + E +++ + H N+V+L
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 59 CVEDNNR--ILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADP 116
E R +L+ E+ SL L + Y L + G++ L E
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAY-GLPESEFLIVLRDVVGGMNHLRENG-- 132
Query: 117 PIVHRDIKASNVLL----DGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAP---EY 169
IVHR+IK N++ DG K+ DFG A+ D+ V + GT YL P E
Sbjct: 133 -IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX--LYGTEEYLHPDMYER 189
Query: 170 ALLGQLTKK-----ADVYSFGVLLLEIISG 194
A+L + +K D++S GV +G
Sbjct: 190 AVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 88/212 (41%), Gaps = 27/212 (12%)
Query: 1 MIGGGAFGVVYRGS-LRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIR-HPNLVQL--- 55
++ G F VY + G + A+K L + ++ + + E+ + + HPN+VQ
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 56 --IGCCVEDNNR--ILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLH 111
IG D + L+ L L L +S+ L T I T + +H
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESR-GPLSCDTVLKIFYQTCRAVQHMH 153
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKL---FPDN---------VTHVSTRVA 159
+ PPI+HRD+K N+LL K+ DFG A +PD V TR
Sbjct: 154 RQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNT 212
Query: 160 GTMGYLAPEYALLGQ---LTKKADVYSFGVLL 188
M Y PE L + +K D+++ G +L
Sbjct: 213 TPM-YRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 111/261 (42%), Gaps = 40/261 (15%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIR-HPNLVQLIGC 58
++G GA V +L + A+K + + E++M++ + H N+++LI
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
E++ LV+E + S+ L K + + + AS L FLH + I
Sbjct: 80 FEEEDRFYLVFEKMRGGSI----LSHIHKRRHFNELEASVVVQDVASALDFLHNKG---I 132
Query: 119 VHRDIKASNVLLDGNFHP------KIGDFGLAKLFPDN--VTHVST----RVAGTMGYLA 166
HRD+K N+L + HP KI DFGL N + +ST G+ Y+A
Sbjct: 133 AHRDLKPENILCE---HPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 167 PEY--ALLGQLT---KKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLRE--- 218
PE A + + K+ D++S GV+L ++SG G D W E
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC------GWDRGEACP 243
Query: 219 --EGRLLEIVDPELTQFPEKE 237
+ L E + +FP+K+
Sbjct: 244 ACQNMLFESIQEGKYEFPDKD 264
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 24/204 (11%)
Query: 2 IGGGAFGVVYRGSLRD-GTQIAIK----------CLSAESKQGTKEFLTEIDMIWNIRHP 50
+G GAFG V+ ++ ++ +K C + K G + EI ++ + H
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLG--KVTLEIAILSRVEHA 89
Query: 51 NLVQLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFL 110
N+++++ N+ +E + L ++ LD P + I S + +L
Sbjct: 90 NIIKVLDIF---ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYL 146
Query: 111 HEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYA 170
+ I+HRDIK N+++ +F K+ DFG A + GT+ Y APE
Sbjct: 147 RLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT--FCGTIEYCAPE-V 200
Query: 171 LLGQLTK--KADVYSFGVLLLEII 192
L+G + + +++S GV L ++
Sbjct: 201 LMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 2 IGGGAFGVV---YRGSLRDGTQIAIKCLSAESKQGT--KEFLTEIDMIWNIRHPNLVQLI 56
IG GA G+V Y L +AIK LS + T K E+ ++ + H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 57 GC-----CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLH 111
+E+ + + L + +L + + LD + + G+ LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLCGIKHLH 143
Query: 112 EEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYAL 171
I+HRD+K SN+++ + KI DFGLA+ + + T Y APE L
Sbjct: 144 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRYYRAPEVIL 198
Query: 172 LGQLTKKADVYSFGVLLLEIISGR 195
+ D++S G ++ E++ +
Sbjct: 199 GMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 119 VHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLTKK 178
HRD+K N+L+ + + DFG+A D GT+ Y APE T +
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 179 ADVYSFGVLLLEIISG 194
AD+Y+ +L E ++G
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 106/245 (43%), Gaps = 65/245 (26%)
Query: 1 MIGGGAFG-VVYRGSLRDGTQIAIKCL---SAESKQGTKEFLTEIDMIWNIRHPNLVQLI 56
++G G+ G VV++GS + G +A+K + + + LTE D HPN+++
Sbjct: 22 ILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVIRYY 75
Query: 57 GCCVEDNNRIL----------VYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASG 106
C E +R L + + +E+ ++++ L + +Y + ++ ASG
Sbjct: 76 --CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI------SLLRQIASG 127
Query: 107 LSFLHEEADPPIVHRDIKASNVLLDG-------------NFHPKIGDFGLAK-------L 146
++ LH I+HRD+K N+L+ N I DFGL K
Sbjct: 128 VAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 184
Query: 147 FPDNVTHVSTRVAGTMGYLAPE-------YALLGQLTKKADVYSFGVLLLEIISGRSSSK 199
F N+ + S GT G+ APE +LT+ D++S G + I+ S K
Sbjct: 185 FRXNLNNPS----GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL---SKGK 237
Query: 200 AAFGD 204
FGD
Sbjct: 238 HPFGD 242
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 47/233 (20%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ-IAIKCLSA--ESKQGTKEFLTEIDMIWNIRHPNLVQLIG 57
+IG G++G VY ++ + +AIK ++ E K L EI ++ ++ +++L
Sbjct: 35 LIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHD 94
Query: 58 CCVEDNNRIL--VYEYLENNSLANALLGSKSKY-VSLDWPTRANICLGTASGLSFLHEEA 114
+ ++ +Y LE +A++ L K + L I G F+HE
Sbjct: 95 LIIPEDLLKFDELYIVLE---IADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESG 151
Query: 115 DPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLF----------------------PDN-- 150
I+HRD+K +N LL+ + KI DFGLA+ P N
Sbjct: 152 ---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKN 208
Query: 151 -----VTHVSTRVAGTMGYLAPEYALLGQ-LTKKADVYSFGVLLLEIISGRSS 197
+HV TR Y APE LL + T D++S G + E+++ S
Sbjct: 209 LKKQLTSHVVTR-----WYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS 256
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 107/255 (41%), Gaps = 42/255 (16%)
Query: 1 MIGGGAFGVVYRGSLRD-GTQIAIKCLSAESKQGTKEFLTEIDMIWNIRHPNLVQLIGC- 58
M G G FG V G + G +AIK + + + +E D+ + HPN+VQL
Sbjct: 30 MAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAV-LHHPNIVQLQSYF 88
Query: 59 -CVEDNNRILVY-----EYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHE 112
+ + +R +Y EY+ + +L + V+ + LH
Sbjct: 89 YTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL 147
Query: 113 EADPPIVHRDIKASNVLL---DGNFHPKIGDFGLA-KLFPD--NVTHVSTRVAGTMGYLA 166
+ + HRDIK NVL+ DG K+ DFG A KL P NV ++ +R Y A
Sbjct: 148 PS-VNVCHRDIKPHNVLVNEADGTL--KLCDFGSAKKLSPSEPNVAYICSRY-----YRA 199
Query: 167 PEYALLGQ-LTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLREEGRLLEI 225
PE Q T D++S G + E++ G + GD+ G+L EI
Sbjct: 200 PELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFR---GDN------------SAGQLHEI 244
Query: 226 VDPELTQFPEKEVMR 240
V + P +EV+R
Sbjct: 245 V--RVLGCPSREVLR 257
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 110/261 (42%), Gaps = 40/261 (15%)
Query: 1 MIGGGAFGVVYRG-SLRDGTQIAIKCLSAESKQGTKEFLTEIDMIWNIR-HPNLVQLIGC 58
++G GA V +L + A+K + + E++M++ + H N+++LI
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
E++ LV+E + S+ L K + + + AS L FLH + I
Sbjct: 80 FEEEDRFYLVFEKMRGGSI----LSHIHKRRHFNELEASVVVQDVASALDFLHNKG---I 132
Query: 119 VHRDIKASNVLLDGNFHP------KIGDFGLAKLFPDN--VTHVST----RVAGTMGYLA 166
HRD+K N+L + HP KI DF L N + +ST G+ Y+A
Sbjct: 133 AHRDLKPENILCE---HPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 167 PEY--ALLGQLT---KKADVYSFGVLLLEIISGRSSSKAAFGDDMLILVEWTWKLRE--- 218
PE A + + K+ D++S GV+L ++SG G D W E
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC------GWDRGEACP 243
Query: 219 --EGRLLEIVDPELTQFPEKE 237
+ L E + +FP+K+
Sbjct: 244 ACQNMLFESIQEGKYEFPDKD 264
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLTEIDMIWNIRHP------NLV 53
+IG G+FG V + Q +A+K + E K+ ++ EI ++ ++R N++
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 54 QLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE 113
++ N+ + +E L N L K+K+ P L LH+
Sbjct: 163 HMLENFTFRNHICMTFELLSMNLYE---LIKKNKFQGFSLPLVRKFAHSILQCLDALHKN 219
Query: 114 ADPPIVHRDIKASNVLL--DGNFHPKIGDFGLAKLFPDNV-THVSTRVAGTMGYLAPEYA 170
I+H D+K N+LL G K+ DFG + V T + +R Y APE
Sbjct: 220 R---IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----YRAPEVI 271
Query: 171 LLGQLTKKADVYSFGVLLLEIISG 194
L + D++S G +L E+++G
Sbjct: 272 LGARYGMPIDMWSLGCILAELLTG 295
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 107 LSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLA 166
L+ LH + +VH D+K +N+ L K+GDFGL L G Y+A
Sbjct: 170 LAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMA 224
Query: 167 PEYALLGQLTKKADVYSFGVLLLEI 191
PE L G ADV+S G+ +LE+
Sbjct: 225 PEL-LQGSYGTAADVFSLGLTILEV 248
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 22/204 (10%)
Query: 1 MIGGGAFGVVYRGSLRDGTQ-IAIKCLSAESKQGTKEFLTEIDMIWNIRHP------NLV 53
+IG G+FG V + Q +A+K + E K+ ++ EI ++ ++R N++
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 54 QLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE 113
++ N+ + +E L N L K+K+ P L LH+
Sbjct: 163 HMLENFTFRNHICMTFELLSMNLYE---LIKKNKFQGFSLPLVRKFAHSILQCLDALHKN 219
Query: 114 ADPPIVHRDIKASNVLL--DGNFHPKIGDFGLAKLFPDNV-THVSTRVAGTMGYLAPEYA 170
I+H D+K N+LL G K+ DFG + V T + +R Y APE
Sbjct: 220 R---IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----YRAPEVI 271
Query: 171 LLGQLTKKADVYSFGVLLLEIISG 194
L + D++S G +L E+++G
Sbjct: 272 LGARYGMPIDMWSLGCILAELLTG 295
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 76/183 (41%), Gaps = 26/183 (14%)
Query: 40 EIDMIWNIRHPNLVQLIGCCV--EDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRA 97
EI ++ +RH N++QL+ E +V EY + G + S+ R
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY--------CVCGMQEMLDSVP-EKRF 106
Query: 98 NICLGTA------SGLSFLHEEADPPIVHRDIKASNVLLDGNFHPKIGDFGLAK-LFPDN 150
+C GL +LH + IVH+DIK N+LL KI G+A+ L P
Sbjct: 107 PVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163
Query: 151 VTHVSTRVAGTMGYLAPEYA--LLGQLTKKADVYSFGVLLLEIISGRSSSKAAFGDDMLI 208
G+ + PE A L K D++S GV L I +G + GD++
Sbjct: 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE---GDNIYK 220
Query: 209 LVE 211
L E
Sbjct: 221 LFE 223
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 20/205 (9%)
Query: 2 IGGGAFGVVYRG-SLRDGTQIAIKCLSAESK--QGTKEFLTEIDMIWNIRH-PNLVQLIG 57
+G G F VV + S G + A K L + E L EI ++ + P ++ L
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 58 CCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPP 117
+ IL+ EY + + L ++ VS + R + G+ +LH+
Sbjct: 97 VYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIR--LIKQILEGVYYLHQNN--- 151
Query: 118 IVHRDIKASNVLLDGNFHP----KIGDFGLAKLFPDNVTHVST--RVAGTMGYLAPEYAL 171
IVH D+K N+LL + +P KI DFG+++ + H + GT YLAPE
Sbjct: 152 IVHLDLKPQNILL-SSIYPLGDIKIVDFGMSR----KIGHACELREIMGTPEYLAPEILN 206
Query: 172 LGQLTKKADVYSFGVLLLEIISGRS 196
+T D+++ G++ +++ S
Sbjct: 207 YDPITTATDMWNIGIIAYMLLTHTS 231
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 IVHRDIKASNVLLDGNF-HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRDIK N+L+D N K+ DFG L D V T GT Y PE+ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYH 234
Query: 177 -KKADVYSFGVLLLEIISG 194
+ A V+S G+LL +++ G
Sbjct: 235 GRSAAVWSLGILLYDMVCG 253
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 IVHRDIKASNVLLDGNF-HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRDIK N+L+D N K+ DFG L D V T GT Y PE+ +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYH 191
Query: 177 -KKADVYSFGVLLLEIISG 194
+ A V+S G+LL +++ G
Sbjct: 192 GRSAAVWSLGILLYDMVCG 210
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 IVHRDIKASNVLLDGNF-HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRDIK N+L+D N K+ DFG L D V T GT Y PE+ +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYH 191
Query: 177 -KKADVYSFGVLLLEIISG 194
+ A V+S G+LL +++ G
Sbjct: 192 GRSAAVWSLGILLYDMVCG 210
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 IVHRDIKASNVLLDGNF-HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRDIK N+L+D N K+ DFG L D V T GT Y PE+ +
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYH 190
Query: 177 -KKADVYSFGVLLLEIISG 194
+ A V+S G+LL +++ G
Sbjct: 191 GRSAAVWSLGILLYDMVCG 209
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 IVHRDIKASNVLLDGNF-HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRDIK N+L+D N K+ DFG L D V T GT Y PE+ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYH 187
Query: 177 -KKADVYSFGVLLLEIISG 194
+ A V+S G+LL +++ G
Sbjct: 188 GRSAAVWSLGILLYDMVCG 206
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 IVHRDIKASNVLLDGNF-HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRDIK N+L+D N K+ DFG L D V T GT Y PE+ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYH 192
Query: 177 -KKADVYSFGVLLLEIISG 194
+ A V+S G+LL +++ G
Sbjct: 193 GRSAAVWSLGILLYDMVCG 211
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 IVHRDIKASNVLLDGNF-HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRDIK N+L+D N K+ DFG L D V T GT Y PE+ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYH 192
Query: 177 -KKADVYSFGVLLLEIISG 194
+ A V+S G+LL +++ G
Sbjct: 193 GRSAAVWSLGILLYDMVCG 211
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 IVHRDIKASNVLLDGNF-HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRDIK N+L+D N K+ DFG L D V T GT Y PE+ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYH 187
Query: 177 -KKADVYSFGVLLLEIISG 194
+ A V+S G+LL +++ G
Sbjct: 188 GRSAAVWSLGILLYDMVCG 206
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 IVHRDIKASNVLLDGNF-HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRDIK N+L+D N K+ DFG L D V T GT Y PE+ +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYH 206
Query: 177 -KKADVYSFGVLLLEIISG 194
+ A V+S G+LL +++ G
Sbjct: 207 GRSAAVWSLGILLYDMVCG 225
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 107/274 (39%), Gaps = 61/274 (22%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTKEFLTEIDMIWNI-------RHPNLV 53
IG G FG V++ R DG AIK SK+ + E + + + +H ++V
Sbjct: 19 IGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVYAHAVLGQHSHVV 74
Query: 54 QLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE 113
+ ED++ ++ EY SLA+A+ + ++ L GL ++H
Sbjct: 75 RYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM 134
Query: 114 ADPPIVHRDIKASNVLLDGNFHP-------------------KIGDFGLAKLFPDNVTHV 154
+ +VH DIK SN+ + P KIGD G +VT +
Sbjct: 135 S---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG-------HVTRI 184
Query: 155 STRVA--GTMGYLAPEYALLGQLTK--KADVYSFGVLLLEIISGRSSSKAAFGDDMLILV 210
S+ G +LA E L T KAD+++ + ++ A G + L
Sbjct: 185 SSPQVEEGDSRFLANE-VLQENYTHLPKADIFALALTVV----------CAAGAEPLPRN 233
Query: 211 EWTWKLREEGRLLEIVDPELTQFPEKEVMRFIKV 244
W +GRL P + Q +E +KV
Sbjct: 234 GDQWHEIRQGRL-----PRIPQVLSQEFTELLKV 262
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 IVHRDIKASNVLLDGNF-HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRDIK N+L+D N K+ DFG L D V T GT Y PE+ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYH 187
Query: 177 -KKADVYSFGVLLLEIISG 194
+ A V+S G+LL +++ G
Sbjct: 188 GRSAAVWSLGILLYDMVCG 206
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 IVHRDIKASNVLLDGNF-HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRDIK N+L+D N K+ DFG L D V T GT Y PE+ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYH 192
Query: 177 -KKADVYSFGVLLLEIISG 194
+ A V+S G+LL +++ G
Sbjct: 193 GRSAAVWSLGILLYDMVCG 211
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 IVHRDIKASNVLLDGNF-HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRDIK N+L+D N K+ DFG L D V T GT Y PE+ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYH 207
Query: 177 -KKADVYSFGVLLLEIISG 194
+ A V+S G+LL +++ G
Sbjct: 208 GRSAAVWSLGILLYDMVCG 226
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 IVHRDIKASNVLLDGNF-HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRDIK N+L+D N K+ DFG L D V T GT Y PE+ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYH 234
Query: 177 -KKADVYSFGVLLLEIISG 194
+ A V+S G+LL +++ G
Sbjct: 235 GRSAAVWSLGILLYDMVCG 253
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 IVHRDIKASNVLLDGNF-HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRDIK N+L+D N K+ DFG L D V T GT Y PE+ +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYH 206
Query: 177 -KKADVYSFGVLLLEIISG 194
+ A V+S G+LL +++ G
Sbjct: 207 GRSAAVWSLGILLYDMVCG 225
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 107/274 (39%), Gaps = 61/274 (22%)
Query: 2 IGGGAFGVVYRGSLR-DGTQIAIKCLSAESKQGTKEFLTEIDMIWNI-------RHPNLV 53
IG G FG V++ R DG AIK SK+ + E + + + +H ++V
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVYAHAVLGQHSHVV 72
Query: 54 QLIGCCVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEE 113
+ ED++ ++ EY SLA+A+ + ++ L GL ++H
Sbjct: 73 RYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM 132
Query: 114 ADPPIVHRDIKASNVLLDGNFHP-------------------KIGDFGLAKLFPDNVTHV 154
+ +VH DIK SN+ + P KIGD G +VT +
Sbjct: 133 S---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG-------HVTRI 182
Query: 155 STRVA--GTMGYLAPEYALLGQLTK--KADVYSFGVLLLEIISGRSSSKAAFGDDMLILV 210
S+ G +LA E L T KAD+++ + ++ A G + L
Sbjct: 183 SSPQVEEGDSRFLANE-VLQENYTHLPKADIFALALTVV----------CAAGAEPLPRN 231
Query: 211 EWTWKLREEGRLLEIVDPELTQFPEKEVMRFIKV 244
W +GRL P + Q +E +KV
Sbjct: 232 GDQWHEIRQGRL-----PRIPQVLSQEFTELLKV 260
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 IVHRDIKASNVLLDGNF-HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRDIK N+L+D N K+ DFG L D V T GT Y PE+ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYH 207
Query: 177 -KKADVYSFGVLLLEIISG 194
+ A V+S G+LL +++ G
Sbjct: 208 GRSAAVWSLGILLYDMVCG 226
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 IVHRDIKASNVLLDGNF-HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRDIK N+L+D N K+ DFG L D V T GT Y PE+ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYH 207
Query: 177 -KKADVYSFGVLLLEIISG 194
+ A V+S G+LL +++ G
Sbjct: 208 GRSAAVWSLGILLYDMVCG 226
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 IVHRDIKASNVLLDGNF-HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRDIK N+L+D N K+ DFG L D V T GT Y PE+ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYH 219
Query: 177 -KKADVYSFGVLLLEIISG 194
+ A V+S G+LL +++ G
Sbjct: 220 GRSAAVWSLGILLYDMVCG 238
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 2 IGGGAFGVVYRGS-LRDGTQIAIKCLSAESKQGTKEFLTEIDMIWN--IRHPNLVQLIGC 58
IG G+FG +Y G+ ++ ++AIK + ++K + ++I I PN V+ G
Sbjct: 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPN-VRWFG- 72
Query: 59 CVEDNNRILVYEYLENNSLANALLGSKSKYVSLDWPTRANICLGTASGLSFLHEEADPPI 118
VE + +LV + L SL + L S+ +SL T + + + F+H ++
Sbjct: 73 -VEGDYNVLVMDLL-GPSLED-LFNFCSRKLSLK--TVLMLADQMINRVEFVHSKS---F 124
Query: 119 VHRDIKASNVLLDGNFHPK---IGDFGLAKLFPDNVTHV------STRVAGTMGYLAPEY 169
+HRDIK N L+ I DFGLAK + D TH + + GT Y +
Sbjct: 125 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNT 184
Query: 170 ALLGQLTKKADVYSFGVLLLEIISG 194
L + +++ D+ S G +L+ + G
Sbjct: 185 HLGIEQSRRDDLESLGYVLMYFLRG 209
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 IVHRDIKASNVLLDGNF-HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRDIK N+L+D N K+ DFG L D V T GT Y PE+ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYH 234
Query: 177 -KKADVYSFGVLLLEIISG 194
+ A V+S G+LL +++ G
Sbjct: 235 GRSAAVWSLGILLYDMVCG 253
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 118 IVHRDIKASNVLLDGNF-HPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLGQLT 176
++HRDIK N+L+D N K+ DFG L D V T GT Y PE+ +
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEWIRYHRYH 214
Query: 177 -KKADVYSFGVLLLEIISG 194
+ A V+S G+LL +++ G
Sbjct: 215 GRSAAVWSLGILLYDMVCG 233
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,214,019
Number of Sequences: 62578
Number of extensions: 373573
Number of successful extensions: 3383
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 195
Number of HSP's that attempted gapping in prelim test: 897
Number of HSP's gapped (non-prelim): 1147
length of query: 322
length of database: 14,973,337
effective HSP length: 99
effective length of query: 223
effective length of database: 8,778,115
effective search space: 1957519645
effective search space used: 1957519645
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)