Your job contains 1 sequence.
>020721
MKASTSRPHQRQFIVWSFFFILFLCVIASINEVRFDGLLKFGRCTFLNSSSHLSNDSFSN
ASHVVATNSSSEDIRILIGILTLPDQYHRRHFLRMIYGTQSPTGAQVDVKFVFCNLTKED
QKVLVALEIMRYDDIIILNCKENMNKGKTYTYFSSLPEIFNTSDRPYPPYHYVMKGDDDT
YIRLENLVKSLVPLPREDLYYGYVIPCRSMDPFVDYMSGMGYLVSWDIAEWIRDSDIPKN
HLEGPEDKVFGAWIREGRRAKNRYNAKWSMYNFPVPRTACTHELWADTIAVHLLKNQEKW
IETLTYFNVTANLKPSKLYHIP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020721
(322 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2174527 - symbol:AT5G57500 species:3702 "Arabi... 1292 9.1e-132 1
POMBASE|SPBC1921.06c - symbol:pvg3 "galactosylxylosylprot... 112 2.6e-10 2
UNIPROTKB|Q9BYG0 - symbol:B3GNT5 "Lactosylceramide 1,3-N-... 128 1.6e-05 1
UNIPROTKB|F1N1Y2 - symbol:B3GNT5 "Uncharacterized protein... 123 5.2e-05 1
UNIPROTKB|E2R4J5 - symbol:B3GNT5 "Uncharacterized protein... 123 6.1e-05 1
RGD|70955 - symbol:B3gnt5 "UDP-GlcNAc:betaGal beta-1,3-N-... 118 0.00020 2
UNIPROTKB|F1NRQ5 - symbol:B3GNT5 "Uncharacterized protein... 114 0.00062 1
>TAIR|locus:2174527 [details] [associations]
symbol:AT5G57500 species:3702 "Arabidopsis thaliana"
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006486 "protein
glycosylation" evidence=IEA] [GO:0008378 "galactosyltransferase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016757 "transferase activity, transferring glycosyl groups"
evidence=ISS] InterPro:IPR002659 Pfam:PF01762 GO:GO:0016021
GO:GO:0005794 EMBL:CP002688 GO:GO:0006486 GO:GO:0008378 CAZy:GT31
PANTHER:PTHR11214 EMBL:AB011482 IPI:IPI00519763 RefSeq:NP_200558.1
UniGene:At.29331 ProteinModelPortal:Q9FKM1
EnsemblPlants:AT5G57500.1 GeneID:835854 KEGG:ath:AT5G57500
TAIR:At5g57500 InParanoid:Q9FKM1 OMA:KNRFNAK PhylomeDB:Q9FKM1
ProtClustDB:CLSN2687421 Genevestigator:Q9FKM1 Uniprot:Q9FKM1
Length = 318
Score = 1292 (459.9 bits), Expect = 9.1e-132, P = 9.1e-132
Identities = 244/323 (75%), Positives = 267/323 (82%)
Query: 1 MKASTSRPHQRQFIVWSFFFILFLCVIASINEVRFDGLLKFGRCTFLXXXXXXXXXXXXX 60
MK+S R R+FI+ SFFFI+ LCV+A INE+RFD LL FGRC
Sbjct: 1 MKSSP-RSEGRKFIIPSFFFIIALCVLAFINEIRFDSLLSFGRCAL----SNVPMNNGSS 55
Query: 61 XXHVVATNSSSEDIRILIGILTLPDQYHRRHFLRMIYGTQS-PTGAQVDVKFVFCNLTKE 119
+++++ ++IRILIGILTLPDQY RRHFLRMIYGTQ+ P G +VDVKFVFCNLTKE
Sbjct: 56 ETPLLSSSPVDDEIRILIGILTLPDQYSRRHFLRMIYGTQNVPDGVKVDVKFVFCNLTKE 115
Query: 120 DQKVLVALEIMRYDDIIILNCKENMNKGKTYTYFSSLPEIFNTSDRPYPPYHYVMKGDDD 179
DQKVLVALEIMRYDDIIILNC ENMNKGKTYTYFSSLP+IFN +D PPYHYVMK DDD
Sbjct: 116 DQKVLVALEIMRYDDIIILNCNENMNKGKTYTYFSSLPDIFNETDAQKPPYHYVMKADDD 175
Query: 180 TYIRLENLVKSLVPLPREDLYYGYVIPCRSMDPFVDYMSGMGYLVSWDIAEWIRDSDIPK 239
TYIRLE+LV SL PLPREDLYYGYVIPC SMDPFV YMSGMGYLVSWDIA W++DS+IPK
Sbjct: 176 TYIRLESLVASLRPLPREDLYYGYVIPCPSMDPFVHYMSGMGYLVSWDIAVWLKDSEIPK 235
Query: 240 NHLEGPEDKVFGAWIREGRRAKNRYNAKWSMYNFPVPRTACTHELWADTIAVHLLKNQEK 299
HLEGPEDKVFG WIREGRR KNR+NAKWSMYNFP P T CTHELW DTIAVHLLKNQEK
Sbjct: 236 KHLEGPEDKVFGDWIREGRRGKNRFNAKWSMYNFPEPPTRCTHELWPDTIAVHLLKNQEK 295
Query: 300 WIETLTYFNVTANLKPSKLYHIP 322
WI TL YFNVT+NLKPSKLYHIP
Sbjct: 296 WIRTLNYFNVTSNLKPSKLYHIP 318
>POMBASE|SPBC1921.06c [details] [associations]
symbol:pvg3 "galactosylxylosylprotein
3-beta-galactosyltransferase Pvg1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006486 "protein glycosylation" evidence=IEA] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IC] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0032580 "Golgi cisterna
membrane" evidence=IEA] [GO:0046919 "pyruvyltransferase activity"
evidence=TAS] [GO:0047220 "galactosylxylosylprotein
3-beta-galactosyltransferase activity" evidence=IEA] [GO:0051072
"4,6-pyruvylated galactose residue biosynthetic process"
evidence=IMP] InterPro:IPR002659 PomBase:SPBC1921.06c GO:GO:0005783
GO:GO:0016021 GO:GO:0007126 GO:GO:0005794 GO:GO:0005789
EMBL:CU329671 GO:GO:0006486 GenomeReviews:CU329671_GR GO:GO:0032580
GO:GO:0009272 CAZy:GT31 PANTHER:PTHR11214 GO:GO:0047220
GO:GO:0046919 GO:GO:0051072 PIR:T39790 RefSeq:NP_595999.1
STRING:Q9USX0 EnsemblFungi:SPBC1921.06c.1 GeneID:2540827
KEGG:spo:SPBC1921.06c eggNOG:NOG310949 OrthoDB:EOG45F0ZS
NextBio:20801944 Uniprot:Q9USX0
Length = 378
Score = 112 (44.5 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 45/156 (28%), Positives = 69/156 (44%)
Query: 148 KTYTYFSSLPEIFNTSDRPYPPYHYVMKGDDDTYIRLENLVKSLVP-LPREDLYYGYVIP 206
KTY + E F P Y +++K DDD+++ L L + L + + Y+G
Sbjct: 184 KTYE-LPGMKE-FQDLGEPKHDYDFIVKADDDSFLNLPRLFEMLKEHVGKSRFYFGRDCT 241
Query: 207 CRSMDPFV-D--YMSGMGYLVSWDIAEWIRDSDIPKNHLEGPEDKVFGAWIREGRRAKNR 263
R + V D YM G Y+VS D+A + +N + ED G I KN
Sbjct: 242 RRELPTAVRDFPYMCGFFYIVSPDMAYEVAKR---RNIIIPFEDAQTGYSIYLSGNVKNA 298
Query: 264 YNAKWSMYNFPVPRTACTHE---LWADTIAVHLLKN 296
+K ++Y+ +P + L D IAVH LK+
Sbjct: 299 EFSKCTLYDLILPNEGFNYRQSYLRIDAIAVHKLKS 334
Score = 103 (41.3 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 28/105 (26%), Positives = 52/105 (49%)
Query: 68 NSSSEDIRILIGILTLPDQYHRRHFLRMIYGT---QSPTGAQVDVKFVFCNLTKEDQKVL 124
+++ ++ +GI + RR+FLR Y + VDV+F+ L + +Q++
Sbjct: 58 HANDRPFKLYLGIFSQAKNVDRRNFLRTDYNEYIKEFAVNDTVDVRFIL-GLPENEQELA 116
Query: 125 VALEIMR-YDDIIILNCKENMNKGKTYTYFSSLPEIFNTSDRPYP 168
E R Y D+ +L EN++ GK+ YF + E + +P+P
Sbjct: 117 TIREEQRTYGDLAVLPIPENVDAGKSIVYFQTFLEGY----QPFP 157
>UNIPROTKB|Q9BYG0 [details] [associations]
symbol:B3GNT5 "Lactosylceramide
1,3-N-acetyl-beta-D-glucosaminyltransferase" species:9606 "Homo
sapiens" [GO:0008378 "galactosyltransferase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0047256
"lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
activity" evidence=IEA] [GO:0008917 "lipopolysaccharide
N-acetylglucosaminyltransferase activity" evidence=IEA] [GO:0008457
"beta-galactosyl-N-acetylglucosaminylgalactosylglucosyl-ceramide
beta-1,3-acetylglucosaminyltransferase activity" evidence=IDA]
[GO:0009247 "glycolipid biosynthetic process" evidence=TAS]
[GO:0007417 "central nervous system development" evidence=IDA]
[GO:0005622 "intracellular" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=TAS] [GO:0000139 "Golgi membrane"
evidence=TAS] [GO:0016266 "O-glycan processing" evidence=TAS]
[GO:0043687 "post-translational protein modification" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_17015 InterPro:IPR002659 Pfam:PF01762
UniPathway:UPA00378 GO:GO:0016021 GO:GO:0000139 EMBL:CH471052
GO:GO:0008378 GO:GO:0009247 GO:GO:0007417 GO:GO:0043687 CAZy:GT31
eggNOG:NOG253164 HOGENOM:HOG000064519 HOVERGEN:HBG101684 KO:K03766
OMA:LCANKMG OrthoDB:EOG4PNXH6 BRENDA:2.4.1.206 GO:GO:0047256
PANTHER:PTHR11214 GO:GO:0016266 EMBL:AB045278 EMBL:AF368169
EMBL:AJ304505 EMBL:AB209517 EMBL:BC028058 IPI:IPI00012508
RefSeq:NP_114436.1 UniGene:Hs.718506 ProteinModelPortal:Q9BYG0
IntAct:Q9BYG0 STRING:Q9BYG0 DMDM:74733473 PRIDE:Q9BYG0 DNASU:84002
Ensembl:ENST00000326505 Ensembl:ENST00000460419
Ensembl:ENST00000465010 GeneID:84002 KEGG:hsa:84002 UCSC:uc003flk.3
CTD:84002 GeneCards:GC03P182971 HGNC:HGNC:15684 HPA:HPA017292
neXtProt:NX_Q9BYG0 PharmGKB:PA25221 InParanoid:Q9BYG0
PhylomeDB:Q9BYG0 GenomeRNAi:84002 NextBio:73170 ArrayExpress:Q9BYG0
Bgee:Q9BYG0 CleanEx:HS_B3GNT5 Genevestigator:Q9BYG0 GO:GO:0008457
GO:GO:0008917 Uniprot:Q9BYG0
Length = 378
Score = 128 (50.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 46/171 (26%), Positives = 85/171 (49%)
Query: 71 SEDIRILIGILTLPDQYHRRHFLRMIYGTQSPTGAQVD--VKFVFC----N-LTKEDQKV 123
++D+ +L+ + T P+ Y RR +R +G ++ +Q++ +K +F N L E+ +
Sbjct: 85 AQDVLLLLFVKTAPENYDRRSGIRRTWGNENYVRSQLNANIKTLFALGTPNPLEGEELQR 144
Query: 124 LVALEIMRYDDIIILNCKENMNKGKTYTYFSSLPEIFNTSDRPYPPYHYVMKGDDDTYIR 183
+A E RY+DII + ++ Y L F+ ++ P ++M DDD +I
Sbjct: 145 KLAWEDQRYNDIIQQDFVDSF-----YNLTLKLLMQFSWANTYCPHAKFLMTADDDIFIH 199
Query: 184 LENLVKSLVPLPR---EDLYYGYVIPCRSMDPFVDYMSGMGYLVSWDIAEW 231
+ NL++ L L + +D + G V R P D S Y VS+++ +W
Sbjct: 200 MPNLIEYLQSLEQIGVQDFWIGRVH--RGAPPIRDKSSK--YYVSYEMYQW 246
>UNIPROTKB|F1N1Y2 [details] [associations]
symbol:B3GNT5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008917 "lipopolysaccharide
N-acetylglucosaminyltransferase activity" evidence=IEA] [GO:0008457
"beta-galactosyl-N-acetylglucosaminylgalactosylglucosyl-ceramide
beta-1,3-acetylglucosaminyltransferase activity" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0008378 "galactosyltransferase
activity" evidence=IEA] [GO:0006486 "protein glycosylation"
evidence=IEA] InterPro:IPR002659 Pfam:PF01762 GO:GO:0016021
GO:GO:0005794 GO:GO:0006486 GO:GO:0008378 GO:GO:0007417
GeneTree:ENSGT00670000097716 OMA:LCANKMG PANTHER:PTHR11214
GO:GO:0008457 GO:GO:0008917 EMBL:DAAA02001890 IPI:IPI00715964
UniGene:Bt.6479 Ensembl:ENSBTAT00000052404 Uniprot:F1N1Y2
Length = 347
Score = 123 (48.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 48/172 (27%), Positives = 84/172 (48%)
Query: 72 EDIRILIGILTLPDQYHRRHFLRMIYGTQSPTGAQVD--VKFVFCNLTKED-------QK 122
+D+ +L+ + T P+ Y+RR +R +G + +Q++ +K +F T D QK
Sbjct: 88 QDVLLLLFVKTAPENYNRRSAIRKTWGNEKYVCSQLNANIKTLFVLGTPSDPLIRERLQK 147
Query: 123 VLVALEIMRYDDIIILNCKENMNKGKTYTYFSSLPEIFNTSDRPYPPYHYVMKGDDDTYI 182
LV + M Y+DII + ++ T + F+ ++R P ++M DDD +I
Sbjct: 148 RLVWEDKM-YNDIIQQDFADSFYN-LTLKFLLQ----FSWANRFCPHAKFLMTADDDIFI 201
Query: 183 RLENLVKSLVPLPR---EDLYYGYVIPCRSMDPFVDYMSGMGYLVSWDIAEW 231
+ NL++ L L R +D + G V R P D S Y VS+++ +W
Sbjct: 202 HMPNLIEYLQSLERIGVQDFWVGRVH--RGAPPVRDKRSK--YYVSYEMYQW 249
>UNIPROTKB|E2R4J5 [details] [associations]
symbol:B3GNT5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0008378
"galactosyltransferase activity" evidence=IEA] [GO:0006486 "protein
glycosylation" evidence=IEA] InterPro:IPR002659 Pfam:PF01762
GO:GO:0016021 GO:GO:0005794 GO:GO:0006486 GO:GO:0008378
GeneTree:ENSGT00670000097716 OMA:LCANKMG PANTHER:PTHR11214
EMBL:AAEX03017266 Ensembl:ENSCAFT00000018761 Uniprot:E2R4J5
Length = 381
Score = 123 (48.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 48/173 (27%), Positives = 85/173 (49%)
Query: 71 SEDIRILIGILTLPDQYHRRHFLRMIYGTQSPTGAQVD--VKFVFC-----N-LTK-EDQ 121
++DI +L+ + T P+ Y+RRH +R +G + +Q++ +K +F N LT+ E Q
Sbjct: 87 AQDILLLLFVKTAPENYNRRHAIRKTWGNEKYVQSQLNANIKTLFALGTPTNPLTRGELQ 146
Query: 122 KVLVALEIMRYDDIIILNCKENMNKGKTYTYFSSLPEIFNTSDRPYPPYHYVMKGDDDTY 181
+ LV E Y+D+I + ++ Y L F ++ P ++M DDD +
Sbjct: 147 RKLV-WEDQMYNDLIQQDFADSF-----YNLTLKLLLQFRWANSFCPHAKFLMTADDDIF 200
Query: 182 IRLENLVKSLVPLPR---EDLYYGYVIPCRSMDPFVDYMSGMGYLVSWDIAEW 231
I + NL++ L L + +D + G V R P D S Y V +++ +W
Sbjct: 201 IHMPNLIEYLQSLEKMGVQDFWIGRVH--RGAPPVRDKRSK--YYVPYEMYQW 249
>RGD|70955 [details] [associations]
symbol:B3gnt5 "UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 5" species:10116 "Rattus
norvegicus" [GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005622
"intracellular" evidence=ISO] [GO:0006486 "protein glycosylation"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IEA;ISO] [GO:0008152 "metabolic process" evidence=ISO]
[GO:0008378 "galactosyltransferase activity" evidence=IEA]
[GO:0008457
"beta-galactosyl-N-acetylglucosaminylgalactosylglucosyl-ceramide
beta-1,3-acetylglucosaminyltransferase activity" evidence=IEA;ISO]
[GO:0008917 "lipopolysaccharide N-acetylglucosaminyltransferase
activity" evidence=IEA;ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0047256 "lactosylceramide
1,3-N-acetyl-beta-D-glucosaminyltransferase activity" evidence=IEA]
InterPro:IPR002659 Pfam:PF01762 UniPathway:UPA00378 RGD:70955
GO:GO:0016021 GO:GO:0000139 GO:GO:0006486 GO:GO:0008378
GO:GO:0007417 CAZy:GT31 eggNOG:NOG253164 HOGENOM:HOG000064519
HOVERGEN:HBG101684 KO:K03766 OMA:LCANKMG OrthoDB:EOG4PNXH6
BRENDA:2.4.1.206 GO:GO:0047256 PANTHER:PTHR11214 CTD:84002
GO:GO:0008457 GO:GO:0008917 EMBL:AABR03079736 EMBL:AB045279
IPI:IPI00358604 RefSeq:NP_446384.1 UniGene:Rn.20376
ProteinModelPortal:Q99NB2 STRING:Q99NB2 PRIDE:Q99NB2
Ensembl:ENSRNOT00000002616 GeneID:116740 KEGG:rno:116740
InParanoid:Q99NB2 NextBio:619666 Genevestigator:Q99NB2
Uniprot:Q99NB2
Length = 377
Score = 118 (46.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 46/172 (26%), Positives = 83/172 (48%)
Query: 71 SEDIRILIGILTLPDQYHRRHFLRMIYGTQSPTGAQVD--VKFVFCNLT------KEDQK 122
++D+ +L+ I T P+ Y RR +R +G ++ +Q++ +K +F T KE QK
Sbjct: 84 AQDVLLLLFIKTAPENYERRSAIRKTWGNENYVQSQLNANIKILFALGTPHPLKGKELQK 143
Query: 123 VLVALEIMRYDDIIILNCKENMNKGKTYTYFSSLPEIFNTSDRPYPPYHYVMKGDDDTYI 182
L+ E Y DII + ++ + T+ + F ++ P ++M DDD +I
Sbjct: 144 RLI-WEDQVYHDIIQQDFTDSFHN-LTFKFLLQ----FGWANTFCPHARFLMTADDDIFI 197
Query: 183 RLENLVKSLVPLPR---EDLYYGYVIPCRSMDPFVDYMSGMGYLVSWDIAEW 231
+ NL++ L L + D + G+V R P D S Y V +++ +W
Sbjct: 198 HMPNLIEYLQGLEQVGVRDFWIGHVH--RGGPPVRDKSSK--YYVPYEMYKW 245
Score = 39 (18.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 16 WSFFFILFLCVIAS 29
W FF + +C I S
Sbjct: 13 WQFFHLFAICFILS 26
>UNIPROTKB|F1NRQ5 [details] [associations]
symbol:B3GNT5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006486 "protein glycosylation" evidence=IEA]
[GO:0008378 "galactosyltransferase activity" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0007417 "central nervous system
development" evidence=IEA] [GO:0008457
"beta-galactosyl-N-acetylglucosaminylgalactosylglucosyl-ceramide
beta-1,3-acetylglucosaminyltransferase activity" evidence=IEA]
[GO:0008917 "lipopolysaccharide N-acetylglucosaminyltransferase
activity" evidence=IEA] InterPro:IPR002659 Pfam:PF01762
GO:GO:0016021 GO:GO:0005794 GO:GO:0006486 GO:GO:0008378
GeneTree:ENSGT00670000097716 OMA:LCANKMG PANTHER:PTHR11214
GO:GO:0008457 GO:GO:0008917 EMBL:AADN02020728 IPI:IPI00590465
Ensembl:ENSGALT00000014247 Uniprot:F1NRQ5
Length = 376
Score = 114 (45.2 bits), Expect = 0.00062, P = 0.00062
Identities = 42/167 (25%), Positives = 73/167 (43%)
Query: 72 EDIRILIGILTLPDQYHRRHFLRMIYGTQ----SPTGAQVDVKFVFCNLTKEDQKVLVAL 127
+D+ +L+ + + P+ HRR +R +G + S A + F T ++ + L
Sbjct: 87 QDVLLLLFVKSSPENRHRRDAIRQTWGNEKYVRSKLNANIKTLFALGQPTDHLRQRDLYL 146
Query: 128 EIMRYDDIIILNCKENMNKGKTYTYFSSLPEIFNTSDRPYPPYHYVMKGDDDTYIRLENL 187
E +Y D+I + + + T F+ + P ++M DDD +I + NL
Sbjct: 147 EDQKYSDLIQQDFLDTFHNLTTKLLLQ-----FSWVNAYCPHARFIMSADDDIFIHMPNL 201
Query: 188 VKSLVPLPR---EDLYYGYVIPCRSMDPFVDYMSGMGYLVSWDIAEW 231
V L L R +DL+ G V R P D S Y V +++ +W
Sbjct: 202 VAYLQSLARMGVQDLWIGRVH--RGSPPVRDKTSK--YYVPYEMYQW 244
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.140 0.448 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 322 307 0.0010 115 3 11 22 0.48 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 624 (66 KB)
Total size of DFA: 259 KB (2137 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.10u 0.13s 25.23t Elapsed: 00:00:01
Total cpu time: 25.10u 0.13s 25.23t Elapsed: 00:00:01
Start: Fri May 10 05:38:27 2013 End: Fri May 10 05:38:28 2013