Your job contains 1 sequence.
>020727
MEGESEFRHWDELIPDALGLIFRNLSLQEVLTVIPGVCKSWRRAVIGPYCWQEIDIEEWS
NRCQPDHLDRMVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRSEMSDS
IVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEA
NAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNFPNL
KVLGPFVMDYYEINDWDDCSDYSDGSEYLAWEFLAGEMGDYDDDDEIYEGMWDDEGRLEE
LELRFYDGIEEDAGIYGWPPSP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020727
(322 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2122308 - symbol:FBW2 "AT4G08980" species:3702... 1027 1.1e-103 1
TAIR|locus:2115949 - symbol:AT4G05460 "AT4G05460" species... 290 1.4e-25 1
TAIR|locus:1005716270 - symbol:AT4G05497 "AT4G05497" spec... 226 8.3e-19 1
TAIR|locus:2115979 - symbol:AT4G05490 "AT4G05490" species... 219 4.6e-18 1
TAIR|locus:2174398 - symbol:SKIP1 "SKP1 interacting partn... 194 8.4e-14 1
TAIR|locus:2118736 - symbol:AT4G30640 "AT4G30640" species... 150 2.6e-08 1
TAIR|locus:2140715 - symbol:AT4G03630 "AT4G03630" species... 140 1.1e-07 1
UNIPROTKB|F1NHD2 - symbol:FBXL2 "Uncharacterized protein"... 144 2.9e-07 1
TAIR|locus:2099443 - symbol:AT3G48880 "AT3G48880" species... 133 2.7e-06 1
UNIPROTKB|Q58DG6 - symbol:FBXL20 "F-box/LRR-repeat protei... 133 5.4e-06 1
UNIPROTKB|Q96IG2 - symbol:FBXL20 "F-box/LRR-repeat protei... 133 5.4e-06 1
MGI|MGI:1919444 - symbol:Fbxl20 "F-box and leucine-rich r... 133 5.4e-06 1
RGD|621722 - symbol:Fbxl20 "F-box and leucine-rich repeat... 129 6.0e-06 1
UNIPROTKB|F1PWK1 - symbol:FBXL2 "Uncharacterized protein"... 132 6.7e-06 1
MGI|MGI:1354704 - symbol:Fbxl17 "F-box and leucine-rich r... 134 8.6e-06 1
TAIR|locus:2027082 - symbol:SKP2A species:3702 "Arabidops... 129 1.1e-05 1
UNIPROTKB|Q9UKC9 - symbol:FBXL2 "F-box/LRR-repeat protein... 130 1.1e-05 1
UNIPROTKB|Q5R3Z8 - symbol:FBXL2 "F-box/LRR-repeat protein... 130 1.1e-05 1
UNIPROTKB|A6H779 - symbol:FBXL2 "F-box/LRR-repeat protein... 129 1.5e-05 1
RGD|1562243 - symbol:Fbxl2 "F-box and leucine-rich repeat... 125 4.1e-05 1
MGI|MGI:1919429 - symbol:Fbxl2 "F-box and leucine-rich re... 125 4.1e-05 1
>TAIR|locus:2122308 [details] [associations]
symbol:FBW2 "AT4G08980" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009737 "response
to abscisic acid stimulus" evidence=IMP] [GO:0010608
"posttranscriptional regulation of gene expression" evidence=IMP]
[GO:0010629 "negative regulation of gene expression" evidence=IMP]
PROSITE:PS50181 UniPathway:UPA00143 GO:GO:0009737 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016567 GO:GO:0010629
EMBL:AL161513 EMBL:AF128396 GO:GO:0010608 EMBL:BT002431
EMBL:BT008715 EMBL:AK317222 EMBL:AY084585 IPI:IPI00545019
PIR:F85090 RefSeq:NP_001078359.1 RefSeq:NP_001154215.1
RefSeq:NP_567343.1 RefSeq:NP_849346.1 RefSeq:NP_974523.1
UniGene:At.27697 ProteinModelPortal:Q9ZPE4 SMR:Q9ZPE4 IntAct:Q9ZPE4
STRING:Q9ZPE4 EnsemblPlants:AT4G08980.1 EnsemblPlants:AT4G08980.2
EnsemblPlants:AT4G08980.3 EnsemblPlants:AT4G08980.4
EnsemblPlants:AT4G08980.5 GeneID:826476 KEGG:ath:AT4G08980
TAIR:At4g08980 eggNOG:NOG274710 HOGENOM:HOG000239506
InParanoid:Q9ZPE4 OMA:RVCKSWS PhylomeDB:Q9ZPE4
ProtClustDB:CLSN2689382 Genevestigator:Q9ZPE4 Uniprot:Q9ZPE4
Length = 317
Score = 1027 (366.6 bits), Expect = 1.1e-103, P = 1.1e-103
Identities = 206/327 (62%), Positives = 244/327 (74%)
Query: 1 MEGESEFRHWDELIPDALGLIFRNLSLQEVLTVIPGVCKSWRRAVIGPYCWQEIDIEEWS 60
ME + EFRHWDELIPDALGLIF +L LQEVLTV+P VCK+W RAV GPYCWQEIDIE WS
Sbjct: 1 MEEDCEFRHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWS 60
Query: 61 NRC-QPDHLDRMVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRSEMSD 119
NR Q DHLDRM+EMLI RS+GSLRKL V+GL ND +FS IA++AGSL+TL++PRS +++
Sbjct: 61 NRFHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPRSGLTN 120
Query: 120 SIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDE 179
S V +A +LS++TFLDLSYC KIG A++AIGKHCK L CRNMHPLD A +S DDE
Sbjct: 121 SGVVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDE 180
Query: 180 ANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNFPN 239
A AIA+TMPKLKRLE+AYH +STE VLKILS C LEFL+LRGCWDV+LD+KF K FP+
Sbjct: 181 AYAIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKFFKEKFPD 240
Query: 240 LKVLGPFVMDYYE-INDWDDC-SDY-SDGSEYLAWEFLAXXXXXXXXXXXXXXXXWDDEG 296
+KVLGP V+ +Y+ INDW+DC SDY SDGS+YLAWEF WDD
Sbjct: 241 MKVLGPRVIGFYDMINDWEDCCSDYFSDGSDYLAWEFFEDGVMGEFYEDEFEHG-WDDN- 298
Query: 297 RXXXXXXRFY-DGIEEDAGIYGWPPSP 322
FY + D + WPPSP
Sbjct: 299 --------FYAENAVLDMEPHIWPPSP 317
>TAIR|locus:2115949 [details] [associations]
symbol:AT4G05460 "AT4G05460" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR001810 PROSITE:PS50181
SMART:SM00256 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016567 EMBL:AL161503
HOGENOM:HOG000239019 EMBL:BT003081 EMBL:AY087774 EMBL:AK227360
IPI:IPI00546408 PIR:F85068 RefSeq:NP_567294.1 UniGene:At.48830
UniGene:At.66629 ProteinModelPortal:Q9M0U9 SMR:Q9M0U9 IntAct:Q9M0U9
STRING:Q9M0U9 PaxDb:Q9M0U9 PRIDE:Q9M0U9 EnsemblPlants:AT4G05460.1
GeneID:825896 KEGG:ath:AT4G05460 TAIR:At4g05460 eggNOG:NOG251781
InParanoid:Q9M0U9 OMA:CFRLNER PhylomeDB:Q9M0U9
ProtClustDB:CLSN2917517 Genevestigator:Q9M0U9 Uniprot:Q9M0U9
Length = 302
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 82/246 (33%), Positives = 127/246 (51%)
Query: 1 ME-GESEFRHWDELIPDALGLIFRNLSLQEVLTVIPGVCKSWRRAVIGPYCWQEIDIEEW 59
ME GES +W EL P+ I L E+L VC+SWRR P W++ID+
Sbjct: 11 MEVGEST--NWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNL 68
Query: 60 SNRCQPDH-LDRMVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPR-SEM 117
+ D+ L+ M + RS G L + + + + IA + +L++LRL R S++
Sbjct: 69 GDLDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQI 128
Query: 118 SDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQD 177
+D + +L + L+LSYCS +L +G+ C + L N HP + D
Sbjct: 129 TDDGFVEAVVKLP-LEELELSYCS-FSVESLRVVGQCCLNMKTLKLNKHP-----QKEND 181
Query: 178 DEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNF 237
D+A AIA TMPKL+ L++ + +S + IL +C+ LE LDLR C++V L K F
Sbjct: 182 DDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQKRCF 241
Query: 238 PNLKVL 243
++KV+
Sbjct: 242 ESVKVV 247
>TAIR|locus:1005716270 [details] [associations]
symbol:AT4G05497 "AT4G05497" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002687 GenomeReviews:CT486007_GR HSSP:Q13309
HOGENOM:HOG000239019 EMBL:AF147263 IPI:IPI00516725
RefSeq:NP_849530.1 UniGene:At.54168 ProteinModelPortal:Q9S9V8
SMR:Q9S9V8 PRIDE:Q9S9V8 EnsemblPlants:AT4G05497.1 GeneID:830176
KEGG:ath:AT4G05497 TAIR:At4g05497 eggNOG:NOG252528
InParanoid:Q9S9V8 OMA:NAILEGC PhylomeDB:Q9S9V8
ProtClustDB:CLSN2918307 Genevestigator:Q9S9V8 Uniprot:Q9S9V8
Length = 246
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 72/235 (30%), Positives = 110/235 (46%)
Query: 6 EFRHWDELIPDALGLIFRNLSLQEVLTVIPGVCKSWRRAVIGPYCWQEIDIEEWSNRCQP 65
E+R+W EL P+ I L E+L VCKSWRR P W++IDI N
Sbjct: 17 EYRNWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNS 76
Query: 66 DHLDRMVEMLITR----SSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRSE--MSD 119
L ++E L R S G L ++ + L N + IA+ + +L+ L + +S
Sbjct: 77 VELFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLSR 136
Query: 120 SIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDE 179
+V + A +L + LD++Y S I L+ +G+ C L L N T D D
Sbjct: 137 GVV-EAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNC----TGDVKCCDKV 191
Query: 180 ANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMK 234
A AIA TMP L+ L++ + +S + IL C L+ L L C ++ + +K
Sbjct: 192 ALAIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNINIVGDIVK 246
>TAIR|locus:2115979 [details] [associations]
symbol:AT4G05490 "AT4G05490" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF81383 EMBL:AL161503
IPI:IPI00523303 PIR:A85069 RefSeq:NP_567296.1 UniGene:At.54167
ProteinModelPortal:Q9M0U6 SMR:Q9M0U6 STRING:Q9M0U6 PRIDE:Q9M0U6
EnsemblPlants:AT4G05490.1 GeneID:825898 KEGG:ath:AT4G05490
TAIR:At4g05490 eggNOG:NOG282057 HOGENOM:HOG000239019
InParanoid:Q9M0U6 OMA:MEACCRH PhylomeDB:Q9M0U6
Genevestigator:Q9M0U6 Uniprot:Q9M0U6
Length = 307
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 68/232 (29%), Positives = 112/232 (48%)
Query: 1 MEGESEFRHWDELIPDALGLIFRNLSLQEVLTVIPGVCKSWRRAVIGPYCWQEIDIEEWS 60
M+GE + +W EL PD L I LS E+L VC+SWRR P W+ ID+
Sbjct: 18 MKGEEKPSNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLR 77
Query: 61 NRCQPDHLDRMVEMLITRSSGSLRKLCVSG--LHNDMMFSLIAENAGSLQTLRLPRSEMS 118
++ ++ S G L + + + + +AE + +L+ LR+ +++
Sbjct: 78 RLYCIYAMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLRVKGGQIT 137
Query: 119 DSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQ-D 177
+ + +L + L+L YCS I + IG+ C L + + + L++ D
Sbjct: 138 SVGIFEAIVKLPLLEELELLYCS-IEEEHFKTIGQACPNL----KTLKLVGFWSHLNESD 192
Query: 178 DEANAIASTMPKLKRLEMAYHVISTEIVLK-ILSSCALLEFLDLRGCWDVKL 228
++A AIA TMP L L++ + + T I L IL C LE LDLR C+++ L
Sbjct: 193 NDALAIADTMPGLLHLQLISNGL-TNIGLNAILDGCPHLECLDLRQCFNINL 243
>TAIR|locus:2174398 [details] [associations]
symbol:SKIP1 "SKP1 interacting partner 1" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0007165 "signal transduction" evidence=RCA]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA]
InterPro:IPR001810 PROSITE:PS50181 UniPathway:UPA00143
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0019005 EMBL:AB013396
HOGENOM:HOG000242674 EMBL:AF263377 EMBL:AK229464 EMBL:BT026067
IPI:IPI00521503 RefSeq:NP_568870.1 UniGene:At.7657
ProteinModelPortal:Q9FDX1 SMR:Q9FDX1 IntAct:Q9FDX1 STRING:Q9FDX1
PaxDb:Q9FDX1 PRIDE:Q9FDX1 EnsemblPlants:AT5G57900.1 GeneID:835901
KEGG:ath:AT5G57900 TAIR:At5g57900 eggNOG:NOG287916
InParanoid:Q9FDX1 OMA:ERYGHWR PhylomeDB:Q9FDX1
ProtClustDB:CLSN2689687 Genevestigator:Q9FDX1 Uniprot:Q9FDX1
Length = 300
Score = 194 (73.4 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 63/198 (31%), Positives = 97/198 (48%)
Query: 59 WSNRCQPDHLDRMVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRS-EM 117
WS + +D M+ ++ S G L K+ V +D S A+ +LQ L + S +
Sbjct: 68 WSPEFE-QKVDLMLRSVVDWSEGGLTKIRVRHC-SDHALSYAADRCPNLQVLAIRSSPNV 125
Query: 118 SDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNM------H----P 167
+D+ + +IA R ++ LD+SYC +I L IG++C L +L RN+ H P
Sbjct: 126 TDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDWSSRHIGSVP 185
Query: 168 LDTADKLSQDD--EANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWD 225
+ D QD EA+AI M L+ LE+ + +S + + I C LE+LDL GC
Sbjct: 186 TEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFGC-- 243
Query: 226 VKLDDKFMKGNFPNLKVL 243
V L + + N LK L
Sbjct: 244 VHLSSRDITSNVSRLKWL 261
Score = 181 (68.8 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 54/173 (31%), Positives = 83/173 (47%)
Query: 4 ESEFRHWDELIPDALGLIFRNLSLQEVLTVIPGVCKSWRRAVIGPYCWQEIDIEEWSNRC 63
E + W L P+ L I L++QE+ T V KSW PY W D+E W +
Sbjct: 2 EEDGSDWGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSY 61
Query: 64 -QPDHL---------DRMVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLP 113
+ HL D M+ ++ S G L K+ V +D S A+ +LQ L +
Sbjct: 62 PESTHLWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHC-SDHALSYAADRCPNLQVLAIR 120
Query: 114 RS-EMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNM 165
S ++D+ + +IA R ++ LD+SYC +I L IG++C L +L RN+
Sbjct: 121 SSPNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNL 173
>TAIR|locus:2118736 [details] [associations]
symbol:AT4G30640 "AT4G30640" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS50181 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161577 IPI:IPI00543230 PIR:E85358
RefSeq:NP_567849.1 UniGene:At.54559 ProteinModelPortal:Q9M096
SMR:Q9M096 EnsemblPlants:AT4G30640.1 GeneID:829187
KEGG:ath:AT4G30640 TAIR:At4g30640 eggNOG:NOG330723
HOGENOM:HOG000242674 InParanoid:Q9M096 OMA:SELTREC PhylomeDB:Q9M096
ProtClustDB:CLSN2917637 Genevestigator:Q9M096 Uniprot:Q9M096
Length = 301
Score = 150 (57.9 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 55/203 (27%), Positives = 94/203 (46%)
Query: 56 IEEWSNRCQPDHLDRMVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRS 115
I W+ + D +D + ++ RS G L ++ + + S AE +L+ L +
Sbjct: 77 INWWTPEFE-DKVDSFLRSVVDRSEGGLTEIRIRHC-TERSLSYAAERCPNLEVLWIKNC 134
Query: 116 -EMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHP-----LD 169
++D+ + +IA + LD+SY I +L +G+ C+ L +L RN+ P L
Sbjct: 135 PNVTDASMEKIAMNCPNLRELDISYSYGITHESLITLGRSCQNLKILKRNLLPRLGPSLP 194
Query: 170 TA----DKLSQ-----DDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDL 220
T D L+ + EA I M +LK LE+ Y ++ + + C+ LE++DL
Sbjct: 195 TIVAPLDYLATFPRYGNIEARIIGKYMTQLKHLEIRYSTLTARGLDSVCKGCSNLEYMDL 254
Query: 221 RGCWDVKLDDKFMKGNFPNLKVL 243
RGC + D + N LK L
Sbjct: 255 RGCISLTRSD--INTNTSGLKNL 275
Score = 120 (47.3 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 49/177 (27%), Positives = 78/177 (44%)
Query: 3 GESEFRHWDELIPDALGLIFRNLSLQEVLTVIPG-VCKSWRRAVIGPYCWQEIDIE---- 57
G + W EL + L IF LS QE + P V K+W A P D+E
Sbjct: 13 GSGLYPDWSELTRECLLDIFSRLS-QEQRWIGPMLVSKNWMNACYDPTLNTIFDLETRFL 71
Query: 58 ---EWSNRCQP---DHLDRMVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLR 111
E N P D +D + ++ RS G L ++ + + S AE +L+ L
Sbjct: 72 SFPESINWWTPEFEDKVDSFLRSVVDRSEGGLTEIRIRHC-TERSLSYAAERCPNLEVLW 130
Query: 112 LPRS-EMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHP 167
+ ++D+ + +IA + LD+SY I +L +G+ C+ L +L RN+ P
Sbjct: 131 IKNCPNVTDASMEKIAMNCPNLRELDISYSYGITHESLITLGRSCQNLKILKRNLLP 187
>TAIR|locus:2140715 [details] [associations]
symbol:AT4G03630 "AT4G03630" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AC005142
EMBL:AL161497 HOGENOM:HOG000239019 eggNOG:KOG1947 EMBL:DQ056642
IPI:IPI00531603 PIR:A85046 RefSeq:NP_192272.1 UniGene:At.54122
ProteinModelPortal:Q9SY41 SMR:Q9SY41 EnsemblPlants:AT4G03630.1
GeneID:825663 KEGG:ath:AT4G03630 TAIR:At4g03630 InParanoid:Q9SY41
OMA:ELEISHG PhylomeDB:Q9SY41 ArrayExpress:Q9SY41
Genevestigator:Q9SY41 Uniprot:Q9SY41
Length = 220
Score = 140 (54.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 47/162 (29%), Positives = 77/162 (47%)
Query: 68 LDRMVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRSEMSDSI-VAQIA 126
L RM+ + S G ++ + D + + IA+ + +L+ L L + + + + A
Sbjct: 25 LGRMMCHAVALSQGGCVEINIEHFGTDSLLTYIADRSSNLRHLGLAKCDQITGMGLFTEA 84
Query: 127 GRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIAST 186
+L + L+LSYC I LEAIG C L L N + D +A IA
Sbjct: 85 MKLPLLEDLELSYCL-IKGKNLEAIGFACLHLKTLKLNCQGFKFPG-FTYDHDALGIAKR 142
Query: 187 MPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKL 228
MP+L+ L++ + +S + I C LE LDLR C+++ L
Sbjct: 143 MPELRCLQLFGNRVSDVGLNAIFDGCPHLEHLDLRQCFNINL 184
>UNIPROTKB|F1NHD2 [details] [associations]
symbol:FBXL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0016020
GO:GO:0006511 GO:GO:0004842 GeneTree:ENSGT00700000104023
InterPro:IPR006553 SMART:SM00367 GO:GO:0006513 OMA:LTENVFG
EMBL:AADN02001289 IPI:IPI00581819 Ensembl:ENSGALT00000019534
Uniprot:F1NHD2
Length = 423
Score = 144 (55.7 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 57/221 (25%), Positives = 102/221 (46%)
Query: 20 LIFRNLSLQEVLTVI--PGVCKSWRRAVIGPYCWQEIDIEEWSNRCQPDHLDRMVEMLIT 77
L+ R S +++T+ V K+W + WQ+ID+ + Q D R+VE +
Sbjct: 19 LLLRIFSFLDIVTLCRCAQVSKAWNVLALDGSNWQKIDLFNF----QTDIEGRVVENISK 74
Query: 78 RSSGSLRKLCVSGLH--NDMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAVTF 134
R G LR+L + G H D A+N +++ L L ++++DS ++ S +
Sbjct: 75 RCGGFLRQLSLRGCHVVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKH 134
Query: 135 LDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLE 194
LDL+ C I +L+ + + C+ L L N L D++++D A+ LK L
Sbjct: 135 LDLTSCVAITNSSLKGLSEGCRNLEHL--N---LSWCDQITKDG-IEALVKGCSGLKALF 188
Query: 195 M-AYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMK 234
+ + E + I + C L L+L+ C + D+ +K
Sbjct: 189 LRGCTQLEDEALKHIQNHCHELAILNLQSCTQIS-DEGIVK 228
Score = 117 (46.2 bits), Expect = 0.00033, P = 0.00033
Identities = 46/171 (26%), Positives = 79/171 (46%)
Query: 76 ITRSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAV 132
I R L+ LCVSG N D + + N L+ L R S+++D+ +A +
Sbjct: 229 ICRGCHRLQSLCVSGCCNLTDASLTALGLNCPRLKILEAARCSQLTDAGFTLLARNCHEL 288
Query: 133 TFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKR 192
+DL C I L + HC L L + L T D + +N+ +L+
Sbjct: 289 EKMDLEECVLITDSTLIQLSIHCPKLQALSLSHCELITDDGILH--LSNSTCGH-ERLQV 345
Query: 193 LEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKV 242
LE+ ++ T++ L+ L +C LE ++L C V + K ++ + P++KV
Sbjct: 346 LELDNCLLITDVTLEHLENCHNLERIELYDCQQVTRAGIKRIRAHRPHVKV 396
>TAIR|locus:2099443 [details] [associations]
symbol:AT3G48880 "AT3G48880" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 PROSITE:PS50181 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF81383 EMBL:AL132963
EMBL:AY045976 EMBL:AY079352 EMBL:AY088907 IPI:IPI00535938
PIR:T49284 RefSeq:NP_190457.1 RefSeq:NP_850671.1 UniGene:At.1388
ProteinModelPortal:Q9M2Z5 SMR:Q9M2Z5 IntAct:Q9M2Z5 PRIDE:Q9M2Z5
EnsemblPlants:AT3G48880.1 EnsemblPlants:AT3G48880.2 GeneID:824049
KEGG:ath:AT3G48880 TAIR:At3g48880 eggNOG:NOG293773
HOGENOM:HOG000071014 InParanoid:Q9M2Z5 OMA:LPAWNRI PhylomeDB:Q9M2Z5
ProtClustDB:CLSN2684218 Genevestigator:Q9M2Z5 Uniprot:Q9M2Z5
Length = 309
Score = 133 (51.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 63/240 (26%), Positives = 98/240 (40%)
Query: 1 MEGESE---FRHWDELIPDALGLIFRNLSLQEVLTVIPGVCKSWRRAVIGPYCWQEIDIE 57
ME E E R W+EL D L IF+ S+ E+ + + VC+ WR A P W+ +D+
Sbjct: 1 MEEEYESRRLRRWEELDTDILVRIFQKFSVFELTSGLAHVCRGWRAACCDPILWKTVDLS 60
Query: 58 E--------------WSNRCQPDHLDRMVEMLITRSSGSLRKLCVS-GLH-NDMMFSLIA 101
+ R + L R++++ + S GS R L L +D + A
Sbjct: 61 NMRSSFIKIPLEPYVYVERRSDEALTRILKLSMNLSGGSTRTLIFHFNLFLSDDQLTYTA 120
Query: 102 ENAGSLQTLRLPRSEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAP-ALEAIGKHCKLLVV 160
E L+ + LP A R+ L+ S P L I K+CK
Sbjct: 121 ERCPGLRRVVLPAWNRIKKTGICKAIRIWK-DLESLTMPSIANPPYLLTEIAKNCKNFKE 179
Query: 161 LCRNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDL 220
L + M P + AN + + +P +K L + I E ++KIL LE L++
Sbjct: 180 L-KIMGPFEVFF-------ANTLITCLPNIKTLSIRCSAIKREALMKILDGLPSLEVLNI 231
>UNIPROTKB|Q58DG6 [details] [associations]
symbol:FBXL20 "F-box/LRR-repeat protein 20" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0005737
SUPFAM:SSF81383 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 eggNOG:NOG300245 KO:K10268 HOGENOM:HOG000230659
HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9 EMBL:BT021631 EMBL:BC133345
IPI:IPI00718197 IPI:IPI00884875 RefSeq:NP_001030268.1
UniGene:Bt.20361 ProteinModelPortal:Q58DG6 SMR:Q58DG6 PRIDE:Q58DG6
Ensembl:ENSBTAT00000011020 GeneID:511007 KEGG:bta:511007 CTD:84961
OMA:CAHDRLE NextBio:20869722 Uniprot:Q58DG6
Length = 436
Score = 133 (51.9 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 50/176 (28%), Positives = 82/176 (46%)
Query: 73 EMLIT--RSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAG 127
E LIT R L+ LC SG N D + + + +N L+ L + R S+++D +A
Sbjct: 237 EGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLAR 296
Query: 128 RLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTM 187
+ +DL C +I L + HC L VL + L T D + N A
Sbjct: 297 NCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRH--LGNG-ACAH 353
Query: 188 PKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKV 242
+L+ +E+ + T+ L+ L SC LE ++L C + + K ++ + PN+KV
Sbjct: 354 DQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKV 409
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 56/213 (26%), Positives = 95/213 (44%)
Query: 20 LIFRNLSLQEVLTVI--PGVCKSWRRAVIGPYCWQEIDIEEWSNRCQPDHLDRMVEMLIT 77
L+ R S +V+T+ V ++W + WQ ID+ ++ Q D R+VE +
Sbjct: 32 LLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDF----QRDIEGRVVENISK 87
Query: 78 RSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAVTF 134
R G LRKL + G D A+N +++ L L ++ +D+ ++ S +
Sbjct: 88 RCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRH 147
Query: 135 LDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLE 194
LDL+ C+ I +L+A+ + C LL L N+ D K D A+ LK L
Sbjct: 148 LDLASCTSITNMSLKALSEGCPLLEQL--NISWCDQVTK----DGIQALVRGCGGLKALF 201
Query: 195 MAYHVISTEIVLKILSS-CALLEFLDLRGCWDV 226
+ + LK + + C L L+L+ C +
Sbjct: 202 LKGCTQLEDEALKYIGAHCPELVTLNLQTCLQI 234
>UNIPROTKB|Q96IG2 [details] [associations]
symbol:FBXL20 "F-box/LRR-repeat protein 20" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0005737
SUPFAM:SSF81383 InterPro:IPR006553 SMART:SM00367 eggNOG:NOG300245
KO:K10268 HOGENOM:HOG000230659 HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9
CTD:84961 OMA:CAHDRLE EMBL:DQ223959 EMBL:AK291844 EMBL:BC007557
IPI:IPI00174757 IPI:IPI00655936 RefSeq:NP_001171835.1
RefSeq:NP_116264.2 UniGene:Hs.462946 ProteinModelPortal:Q96IG2
SMR:Q96IG2 STRING:Q96IG2 PhosphoSite:Q96IG2 DMDM:38503141
PaxDb:Q96IG2 PRIDE:Q96IG2 DNASU:84961 Ensembl:ENST00000264658
Ensembl:ENST00000394294 Ensembl:ENST00000583610 GeneID:84961
KEGG:hsa:84961 UCSC:uc002hrt.3 UCSC:uc010cvu.3
GeneCards:GC17M037409 HGNC:HGNC:24679 MIM:609086 neXtProt:NX_Q96IG2
PharmGKB:PA134976410 InParanoid:Q96IG2 PhylomeDB:Q96IG2
GenomeRNAi:84961 NextBio:75475 Bgee:Q96IG2 CleanEx:HS_FBXL20
Genevestigator:Q96IG2 GermOnline:ENSG00000108306 Uniprot:Q96IG2
Length = 436
Score = 133 (51.9 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 50/176 (28%), Positives = 82/176 (46%)
Query: 73 EMLIT--RSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAG 127
E LIT R L+ LC SG N D + + + +N L+ L + R S+++D +A
Sbjct: 237 EGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLAR 296
Query: 128 RLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTM 187
+ +DL C +I L + HC L VL + L T D + N A
Sbjct: 297 NCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRH--LGNG-ACAH 353
Query: 188 PKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKV 242
+L+ +E+ + T+ L+ L SC LE ++L C + + K ++ + PN+KV
Sbjct: 354 DQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKV 409
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 56/213 (26%), Positives = 95/213 (44%)
Query: 20 LIFRNLSLQEVLTVI--PGVCKSWRRAVIGPYCWQEIDIEEWSNRCQPDHLDRMVEMLIT 77
L+ R S +V+T+ V ++W + WQ ID+ ++ Q D R+VE +
Sbjct: 32 LLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDF----QRDIEGRVVENISK 87
Query: 78 RSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAVTF 134
R G LRKL + G D A+N +++ L L ++ +D+ ++ S +
Sbjct: 88 RCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKFCSKLRH 147
Query: 135 LDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLE 194
LDL+ C+ I +L+A+ + C LL L N+ D K D A+ LK L
Sbjct: 148 LDLASCTSITNMSLKALSEGCPLLEQL--NISWCDQVTK----DGIQALVRGCGGLKALF 201
Query: 195 MAYHVISTEIVLKILSS-CALLEFLDLRGCWDV 226
+ + LK + + C L L+L+ C +
Sbjct: 202 LKGCTQLEDEALKYIGAHCPELVTLNLQTCLQI 234
>MGI|MGI:1919444 [details] [associations]
symbol:Fbxl20 "F-box and leucine-rich repeat protein 20"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 MGI:MGI:1919444 GO:GO:0005737
SUPFAM:SSF81383 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 EMBL:AL591209 EMBL:AL591205 eggNOG:NOG300245
KO:K10268 HOGENOM:HOG000230659 HOVERGEN:HBG051586 OrthoDB:EOG4KPTB9
CTD:84961 OMA:CAHDRLE EMBL:EF649694 EMBL:AK012109 EMBL:AK036217
EMBL:AK144786 EMBL:AK220232 IPI:IPI00605645 IPI:IPI00874641
IPI:IPI00954305 RefSeq:NP_082425.1 UniGene:Mm.218350
ProteinModelPortal:Q9CZV8 SMR:Q9CZV8 IntAct:Q9CZV8 STRING:Q9CZV8
PhosphoSite:Q9CZV8 PaxDb:Q9CZV8 PRIDE:Q9CZV8
Ensembl:ENSMUST00000103143 GeneID:72194 KEGG:mmu:72194
UCSC:uc007lfm.1 UCSC:uc009vah.1 InParanoid:Q9CZV8 NextBio:335667
Bgee:Q9CZV8 CleanEx:MM_FBXL20 Genevestigator:Q9CZV8
GermOnline:ENSMUSG00000020883 Uniprot:Q9CZV8
Length = 436
Score = 133 (51.9 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 50/176 (28%), Positives = 82/176 (46%)
Query: 73 EMLIT--RSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAG 127
E LIT R L+ LC SG N D + + + +N L+ L + R S+++D +A
Sbjct: 237 EGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLAR 296
Query: 128 RLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTM 187
+ +DL C +I L + HC L VL + L T D + N A
Sbjct: 297 NCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRH--LGNG-ACAH 353
Query: 188 PKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKV 242
+L+ +E+ + T+ L+ L SC LE ++L C + + K ++ + PN+KV
Sbjct: 354 DQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKV 409
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 56/213 (26%), Positives = 95/213 (44%)
Query: 20 LIFRNLSLQEVLTVI--PGVCKSWRRAVIGPYCWQEIDIEEWSNRCQPDHLDRMVEMLIT 77
L+ R S +V+T+ V ++W + WQ ID+ ++ Q D R+VE +
Sbjct: 32 LLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDF----QRDIEGRVVENISK 87
Query: 78 RSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAVTF 134
R G LRKL + G D A+N +++ L L ++ +D+ ++ S +
Sbjct: 88 RCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLSLNGCTKTTDATCTSLSKFCSKLRH 147
Query: 135 LDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLE 194
LDL+ C+ I +L+A+ + C LL L N+ D K D A+ LK L
Sbjct: 148 LDLASCTSITNMSLKALSEGCPLLEQL--NISWCDQVTK----DGIQALVRGCGGLKALF 201
Query: 195 MAYHVISTEIVLKILSS-CALLEFLDLRGCWDV 226
+ + LK + + C L L+L+ C +
Sbjct: 202 LKGCTQLEDEALKYIGAHCPELVTLNLQTCLQI 234
>RGD|621722 [details] [associations]
symbol:Fbxl20 "F-box and leucine-rich repeat protein 20"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
RGD:621722 GO:GO:0005737 GeneTree:ENSGT00700000104023
InterPro:IPR006553 SMART:SM00367 eggNOG:NOG300245 KO:K10268
HOGENOM:HOG000230659 HOVERGEN:HBG051586 CTD:84961 EMBL:AF182443
IPI:IPI00215006 PIR:T52349 RefSeq:NP_071608.1 UniGene:Rn.18281
ProteinModelPortal:Q9QZH7 Ensembl:ENSRNOT00000067317 GeneID:64039
KEGG:rno:64039 UCSC:RGD:621722 InParanoid:Q9QZH7 NextBio:612681
ArrayExpress:Q9QZH7 Genevestigator:Q9QZH7
GermOnline:ENSRNOG00000005081 Uniprot:Q9QZH7
Length = 276
Score = 129 (50.5 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 56/213 (26%), Positives = 95/213 (44%)
Query: 20 LIFRNLSLQEVLTVI--PGVCKSWRRAVIGPYCWQEIDIEEWSNRCQPDHLDRMVEMLIT 77
L+ R S +V+T+ V ++W + WQ ID+ ++ Q D R+VE +
Sbjct: 32 LLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDF----QRDIEGRVVENISK 87
Query: 78 RSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAVTF 134
R G LRKL + G D A+N +++ L L ++ +D+ ++ S +
Sbjct: 88 RCGGFLRKLSLRGCLGVGDNALRTFAQNCRNIEVLSLNGCTKTTDATCTSLSKFCSKLRH 147
Query: 135 LDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLE 194
LDL+ C+ I +L+A+ + C LL L N+ D K D A+ LK L
Sbjct: 148 LDLASCTSITNMSLKALSEGCPLLEQL--NISWCDQVTK----DGIQALVRGCGGLKALF 201
Query: 195 MAYHVISTEIVLKILSS-CALLEFLDLRGCWDV 226
+ + LK + + C L L+L+ C +
Sbjct: 202 LKGCTQLEDEALKYIGAHCPELVTLNLQTCLQI 234
>UNIPROTKB|F1PWK1 [details] [associations]
symbol:FBXL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0006513
"protein monoubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0016020
GO:GO:0006511 GO:GO:0004842 GeneTree:ENSGT00700000104023
InterPro:IPR006553 SMART:SM00367 GO:GO:0006513 OMA:LTENVFG
EMBL:AAEX03013456 Ensembl:ENSCAFT00000007462 Uniprot:F1PWK1
Length = 422
Score = 132 (51.5 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 62/240 (25%), Positives = 106/240 (44%)
Query: 10 W-DELIPDALGLIFRNLSLQEVLTVIPGVCKSWRRAV--IGPYCWQEIDIEEWSNRCQPD 66
W D++ D + + R + L ++ G + A+ I YC + + + S C
Sbjct: 164 WCDQITKDGIEALVRGCRGLKAL-LLRGCTQLEDEALKHIQNYCHELVSLNLQS--CSRI 220
Query: 67 HLDRMVEMLITRSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVA 123
+ +V+ I R L+ LC+SG N D + +A N LQ L R S ++D+
Sbjct: 221 TDEGVVQ--ICRGCHRLQALCLSGCSNLTDASLTALALNCPRLQILEAARCSHLTDAGFT 278
Query: 124 QIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAI 183
+A + +DL C I L + HC L L + L T D + +N+
Sbjct: 279 LLARNCHDLEKMDLEECILITDSTLIQLSVHCPKLQALSLSHCELITDDGILH--LSNST 336
Query: 184 ASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKV 242
+L+ LE+ ++ T++ L+ L +C LE L+L C V + K M+ P++KV
Sbjct: 337 CGH-ERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKV 395
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 55/210 (26%), Positives = 95/210 (45%)
Query: 20 LIFRNLSLQEVLTVI--PGVCKSWRRAVIGPYCWQEIDIEEWSNRCQPDHLDRMVEMLIT 77
L+ R S +++T+ + K+W + WQ ID+ + Q D R+VE +
Sbjct: 18 LLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNF----QTDVEGRVVENISK 73
Query: 78 RSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAVTF 134
R G LRKL + G D A+N +++ L L ++++DS ++ S +
Sbjct: 74 RCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKH 133
Query: 135 LDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLE 194
LDL+ C I +L+ I + C+ L L N L D++++D A+ LK L
Sbjct: 134 LDLTSCVSITNSSLKGISEGCRNLEYL--N---LSWCDQITKDG-IEALVRGCRGLKALL 187
Query: 195 M-AYHVISTEIVLKILSSCALLEFLDLRGC 223
+ + E + I + C L L+L+ C
Sbjct: 188 LRGCTQLEDEALKHIQNYCHELVSLNLQSC 217
>MGI|MGI:1354704 [details] [associations]
symbol:Fbxl17 "F-box and leucine-rich repeat protein 17"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001810
Pfam:PF00646 PROSITE:PS50181 SMART:SM00256 MGI:MGI:1354704
SUPFAM:SSF81383 GeneTree:ENSGT00700000104023 EMBL:CH466537
EMBL:BC058120 EMBL:BC138330 EMBL:BC138331 EMBL:AF176529
EMBL:AK004419 IPI:IPI00348513 IPI:IPI00403922 RefSeq:NP_056609.1
UniGene:Mm.136366 ProteinModelPortal:Q9QZN1 SMR:Q9QZN1
STRING:Q9QZN1 PhosphoSite:Q9QZN1 PRIDE:Q9QZN1
Ensembl:ENSMUST00000024761 GeneID:50758 KEGG:mmu:50758
UCSC:uc008dfj.2 UCSC:uc008dfl.2 CTD:64839 eggNOG:NOG317782
HOGENOM:HOG000169154 HOVERGEN:HBG107935 InParanoid:Q9QZN1 KO:K10283
OMA:PASECAP OrthoDB:EOG4BK54B ChiTaRS:FBXL17 NextBio:307645
Bgee:Q9QZN1 CleanEx:MM_FBXL17 Genevestigator:Q9QZN1
GermOnline:ENSMUSG00000023965 Uniprot:Q9QZN1
Length = 701
Score = 134 (52.2 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 53/217 (24%), Positives = 101/217 (46%)
Query: 11 DELIPDALGLIFRNLSLQEVLTVIPGVCKSWRRAVIGPYCWQEIDIEEWSNRCQPDHLDR 70
++L P L IF NLSL E VCK WR + W+++D+ S+R Q D
Sbjct: 322 NQLPPSILLKIFSNLSLNERCLSASLVCKYWRDLCLDFQFWKQLDL---SSRQQVT--DE 376
Query: 71 MVEMLITRSSGSLRKLCVSGLHN--DMMFSLIAENA-GSLQTLRLPRSEMSDSIVAQIAG 127
++E + +RS + ++ +S + D ++A G L+ ++SD+ + +A
Sbjct: 377 LLEKIASRSQNII-EINISDCRSLSDSGVCVLAFKCPGLLRYTAYRCKQLSDTSIIAVAS 435
Query: 128 RLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTM 187
+ + + K+ L+ +G C+ L +++H K+S D+ IA +
Sbjct: 436 HCPLLQKVHVGNQDKLTDEGLKQLGSRCREL----KDIH-FGQCYKIS-DEGMIVIAKSC 489
Query: 188 PKLKRLEMAYHVISTEIVLKILSS-CALLEFLDLRGC 223
KL+R+ M + + T+ +K + C L+++ GC
Sbjct: 490 LKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGC 526
>TAIR|locus:2027082 [details] [associations]
symbol:SKP2A species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA;IPI] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA;IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0051781 "positive regulation of cell
division" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0071365 "cellular response to auxin stimulus"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR001810 Pfam:PF00646
PROSITE:PS50181 SMART:SM00256 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0051781
SUPFAM:SSF81383 GO:GO:0010311 EMBL:AC015447 GO:GO:0019005
GO:GO:0071365 GO:GO:0004842 InterPro:IPR006553 SMART:SM00367
GO:GO:0031146 KO:K10268 EMBL:AY058081 EMBL:AY090308 EMBL:AY085898
IPI:IPI00519620 PIR:B86347 RefSeq:NP_564139.1 UniGene:At.25230
ProteinModelPortal:Q9LPL4 SMR:Q9LPL4 IntAct:Q9LPL4 STRING:Q9LPL4
EnsemblPlants:AT1G21410.1 GeneID:838740 KEGG:ath:AT1G21410
TAIR:At1g21410 eggNOG:NOG257455 HOGENOM:HOG000238537
InParanoid:Q9LPL4 OMA:NLNISQC PhylomeDB:Q9LPL4
ProtClustDB:CLSN2687892 Genevestigator:Q9LPL4 Uniprot:Q9LPL4
Length = 360
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 62/227 (27%), Positives = 101/227 (44%)
Query: 1 MEGESEFRHWDELIPDALGLIFRNLSLQEVLTVI--PGVCKSWRRAVIGPYCWQEIDIEE 58
MEG S + W + IP + L+ R LSL + VI GVC WR A+ + + +
Sbjct: 20 MEGIS-IKEWKD-IP--VELLMRILSLVDDRNVIVASGVCTGWRDAI--SFGLTRLRLS- 72
Query: 59 WSNRCQPDHLDRMVEMLITRSSGSLRKLCVSGLHNDMMFSLIAENAGSLQTLRLPRS-EM 117
W N + +V + + +LR+ D IA + LQ L L +S ++
Sbjct: 73 WCNNNMNSLVLSLVPKFVKLQTLNLRQ--DKPQLEDNAVEAIANHCHELQELDLSKSLKI 130
Query: 118 SDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQD 177
+D + +A +T L+LS C+ A+ + + C+ L VL N L K D
Sbjct: 131 TDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAYLTRFCRKLKVL--N---LCGCVKAVTD 185
Query: 178 DEANAIASTMPKLKRLEMAY-HVISTEIVLKILSSCALLEFLDLRGC 223
+ AI + +++ L + + IS + V+ + C L LDL GC
Sbjct: 186 NALEAIGNNCNQMQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGC 232
>UNIPROTKB|Q9UKC9 [details] [associations]
symbol:FBXL2 "F-box/LRR-repeat protein 2" species:9606
"Homo sapiens" [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006513 "protein monoubiquitination" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0016020 "membrane"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0006464
"cellular protein modification process" evidence=TAS] [GO:0006508
"proteolysis" evidence=TAS] InterPro:IPR001810 Pfam:PF00646
PROSITE:PS50181 SMART:SM00256 GO:GO:0005737 GO:GO:0019048
GO:GO:0016020 GO:GO:0006508 GO:GO:0006511 GO:GO:0004842
InterPro:IPR006553 SMART:SM00367 GO:GO:0006513 eggNOG:NOG300245
KO:K10268 CTD:25827 HOGENOM:HOG000230659 HOVERGEN:HBG051586
OMA:LTENVFG OrthoDB:EOG4KPTB9 EMBL:AF174589 EMBL:AF176518
EMBL:AF186273 EMBL:AK001438 EMBL:AK298967 EMBL:CR457121
EMBL:AC122176 EMBL:AC123900 EMBL:BC031556 EMBL:AL049953
IPI:IPI00296850 IPI:IPI00923623 PIR:T08680 RefSeq:NP_001165184.1
RefSeq:NP_036289.3 UniGene:Hs.475872 ProteinModelPortal:Q9UKC9
SMR:Q9UKC9 IntAct:Q9UKC9 MINT:MINT-1390736 STRING:Q9UKC9
DMDM:145559475 PRIDE:Q9UKC9 DNASU:25827 Ensembl:ENST00000484457
Ensembl:ENST00000507198 GeneID:25827 KEGG:hsa:25827 UCSC:uc003cfp.3
GeneCards:GC03P033293 HGNC:HGNC:13598 MIM:605652 neXtProt:NX_Q9UKC9
PharmGKB:PA28021 InParanoid:Q9UKC9 PhylomeDB:Q9UKC9 ChiTaRS:FBXL2
GenomeRNAi:25827 NextBio:47109 ArrayExpress:Q9UKC9 Bgee:Q9UKC9
CleanEx:HS_FBXL2 Genevestigator:Q9UKC9 GermOnline:ENSG00000153558
Uniprot:Q9UKC9
Length = 423
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 55/210 (26%), Positives = 95/210 (45%)
Query: 20 LIFRNLSLQEVLTVI--PGVCKSWRRAVIGPYCWQEIDIEEWSNRCQPDHLDRMVEMLIT 77
L+ R S +++T+ + K+W + WQ ID+ + Q D R+VE +
Sbjct: 19 LLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNF----QTDVEGRVVENISK 74
Query: 78 RSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAVTF 134
R G LRKL + G D A+N +++ L L ++++DS ++ S +
Sbjct: 75 RCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKH 134
Query: 135 LDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLE 194
LDL+ C I +L+ I + C+ L L N L D++++D A+ LK L
Sbjct: 135 LDLTSCVSITNSSLKGISEGCRNLEYL--N---LSWCDQITKDG-IEALVRGCRGLKALL 188
Query: 195 M-AYHVISTEIVLKILSSCALLEFLDLRGC 223
+ + E + I + C L L+L+ C
Sbjct: 189 LRGCTQLEDEALKHIQNYCHELVSLNLQSC 218
Score = 128 (50.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 61/240 (25%), Positives = 105/240 (43%)
Query: 10 W-DELIPDALGLIFRNLSLQEVLTVIPGVCKSWRRAV--IGPYCWQEIDIEEWSNRCQPD 66
W D++ D + + R + L ++ G + A+ I YC + + + S C
Sbjct: 165 WCDQITKDGIEALVRGCRGLKAL-LLRGCTQLEDEALKHIQNYCHELVSLNLQS--CSRI 221
Query: 67 HLDRMVEMLITRSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVA 123
+ +V+ I R L+ LC+SG N D + + N LQ L R S ++D+
Sbjct: 222 TDEGVVQ--ICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFT 279
Query: 124 QIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAI 183
+A + +DL C I L + HC L L + L T D + +N+
Sbjct: 280 LLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILH--LSNST 337
Query: 184 ASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKV 242
+L+ LE+ ++ T++ L+ L +C LE L+L C V + K M+ P++KV
Sbjct: 338 CGH-ERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKV 396
>UNIPROTKB|Q5R3Z8 [details] [associations]
symbol:FBXL2 "F-box/LRR-repeat protein 2" species:9601
"Pongo abelii" [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256 GO:GO:0016020
InterPro:IPR006553 SMART:SM00367 KO:K10268 HSSP:Q13309 CTD:25827
HOGENOM:HOG000230659 HOVERGEN:HBG051586 EMBL:CR861354 EMBL:CR861462
RefSeq:NP_001127056.1 RefSeq:NP_001128909.1 UniGene:Pab.18445
UniGene:Pab.19645 ProteinModelPortal:Q5R3Z8 GeneID:100174084
GeneID:100189854 KEGG:pon:100174084 KEGG:pon:100189854
InParanoid:Q5R3Z8 Uniprot:Q5R3Z8
Length = 423
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 55/210 (26%), Positives = 95/210 (45%)
Query: 20 LIFRNLSLQEVLTVI--PGVCKSWRRAVIGPYCWQEIDIEEWSNRCQPDHLDRMVEMLIT 77
L+ R S +++T+ + K+W + WQ ID+ + Q D R+VE +
Sbjct: 19 LLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNF----QTDVEGRVVENISK 74
Query: 78 RSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAVTF 134
R G LRKL + G D A+N +++ L L ++++DS ++ S +
Sbjct: 75 RCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKH 134
Query: 135 LDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLE 194
LDL+ C I +L+ I + C+ L L N L D++++D A+ LK L
Sbjct: 135 LDLTSCVSITNSSLKGISEGCRNLEYL--N---LSWCDQITKDG-IEALVRGCRGLKALL 188
Query: 195 M-AYHVISTEIVLKILSSCALLEFLDLRGC 223
+ + E + I + C L L+L+ C
Sbjct: 189 LRGCTQLEDEALKHIQNYCHELVSLNLQSC 218
Score = 128 (50.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 61/240 (25%), Positives = 105/240 (43%)
Query: 10 W-DELIPDALGLIFRNLSLQEVLTVIPGVCKSWRRAV--IGPYCWQEIDIEEWSNRCQPD 66
W D++ D + + R + L ++ G + A+ I YC + + + S C
Sbjct: 165 WCDQITKDGIEALVRGCRGLKAL-LLRGCTQLEDEALKHIQNYCHELVSLNLQS--CSRI 221
Query: 67 HLDRMVEMLITRSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVA 123
+ +V+ I R L+ LC+SG N D + + N LQ L R S ++D+
Sbjct: 222 TDEGVVQ--ICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGFT 279
Query: 124 QIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAI 183
+A + +DL C I L + HC L L + L T D + +N+
Sbjct: 280 LLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILH--LSNST 337
Query: 184 ASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKV 242
+L+ LE+ ++ T++ L+ L +C LE L+L C V + K M+ P++KV
Sbjct: 338 CGH-ERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKV 396
>UNIPROTKB|A6H779 [details] [associations]
symbol:FBXL2 "F-box/LRR-repeat protein 2" species:9913 "Bos
taurus" [GO:0016020 "membrane" evidence=ISS] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 GO:GO:0016020 GO:GO:0006511
GO:GO:0004842 GeneTree:ENSGT00700000104023 InterPro:IPR006553
SMART:SM00367 GO:GO:0006513 eggNOG:NOG300245 KO:K10268
EMBL:BC146145 IPI:IPI00854546 RefSeq:NP_001092623.1
UniGene:Bt.54599 Ensembl:ENSBTAT00000005160 GeneID:616212
KEGG:bta:616212 CTD:25827 HOGENOM:HOG000230659 HOVERGEN:HBG051586
InParanoid:A6H779 OMA:LTENVFG OrthoDB:EOG4KPTB9 NextBio:20900019
Uniprot:A6H779
Length = 423
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 57/217 (26%), Positives = 98/217 (45%)
Query: 20 LIFRNLSLQEVLTVI--PGVCKSWRRAVIGPYCWQEIDIEEWSNRCQPDHLDRMVEMLIT 77
L+ R S +++T+ + K+W + WQ ID+ + Q D R+VE +
Sbjct: 19 LLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNF----QTDVEGRVVENISK 74
Query: 78 RSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAVTF 134
R G LRKL + G D A+N +++ L L ++++DS ++ S +
Sbjct: 75 RCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKH 134
Query: 135 LDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLE 194
LDL+ C I +L+ I + C+ L L N L D++++D A+ L+ L
Sbjct: 135 LDLTSCVSITNSSLKGISEGCRHLEYL--N---LSWCDQITKDG-VEALVRGCRGLRALL 188
Query: 195 M-AYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDD 230
+ + E + I + C L L+L+ C V DD
Sbjct: 189 LRGCTQLEDEALKHIQNYCHELVSLNLQSCSRVT-DD 224
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 52/198 (26%), Positives = 88/198 (44%)
Query: 49 YCWQEIDIEEWSNRCQPDHLDRMVEMLITRSSGSLRKLCVSGLHN--DMMFSLIAENAGS 106
YC + + + S C D +V++ R L+ LC+SG + D + +A N
Sbjct: 206 YCHELVSLNLQS--CSRVTDDGVVQLC--RGCPRLQALCLSGCGSLTDASLTALALNCPR 261
Query: 107 LQTLRLPR-SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNM 165
LQ L R S ++D+ +A + +DL C I L + HC L L +
Sbjct: 262 LQILEAARCSHLTDAGFTLLARNCHDLEKMDLEECILITDRTLTQLSIHCPKLQALSLSH 321
Query: 166 HPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWD 225
L T D + +N+ +L+ LE+ ++ T++ L+ L C LE L+L C
Sbjct: 322 CELITDDGILH--LSNSPCGH-ERLRVLELDNCLLITDVALEHLEHCRGLERLELYDCQQ 378
Query: 226 V-KLDDKFMKGNFPNLKV 242
V + K M+ P+++V
Sbjct: 379 VTRAGIKRMRAQLPHVRV 396
>RGD|1562243 [details] [associations]
symbol:Fbxl2 "F-box and leucine-rich repeat protein 2"
species:10116 "Rattus norvegicus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0006513 "protein
monoubiquitination" evidence=IEA;ISO] [GO:0016020 "membrane"
evidence=IEA;ISO] InterPro:IPR001810 PROSITE:PS50181 SMART:SM00256
RGD:1562243 GO:GO:0016020 GO:GO:0006511 GO:GO:0004842
GeneTree:ENSGT00700000104023 InterPro:IPR006553 SMART:SM00367
GO:GO:0006513 IPI:IPI00366732 Ensembl:ENSRNOT00000033126
NextBio:682654 Uniprot:F1M768
Length = 422
Score = 125 (49.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 52/210 (24%), Positives = 95/210 (45%)
Query: 20 LIFRNLSLQEVLTVI--PGVCKSWRRAVIGPYCWQEIDIEEWSNRCQPDHLDRMVEMLIT 77
L+ R S +++T+ + K+W + WQ +D+ + Q D R+VE +
Sbjct: 18 LLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRVDLFNF----QTDVEGRVVENISK 73
Query: 78 RSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAVTF 134
R G LRKL + G D A+N +++ L L ++++DS ++ S +
Sbjct: 74 RCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKH 133
Query: 135 LDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLE 194
LDL+ C + +L+ I + C+ L L N L D+++++ A+ LK L
Sbjct: 134 LDLTSCVSVTNSSLKGISEGCRNLEYL--N---LSWCDQITKEG-IEALVRGCRGLKALL 187
Query: 195 M-AYHVISTEIVLKILSSCALLEFLDLRGC 223
+ + E + I + C L L+L+ C
Sbjct: 188 LRGCTQLEDEALKHIQNHCHELVSLNLQSC 217
Score = 117 (46.2 bits), Expect = 0.00033, P = 0.00033
Identities = 47/173 (27%), Positives = 76/173 (43%)
Query: 76 ITRSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAV 132
I R L+ LC+SG N D + + N LQ L R S ++D+ +A +
Sbjct: 228 ICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQVLEAARCSHLTDAGFTLLARNCHDL 287
Query: 133 TFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTM--PKL 190
+DL C I L + HC L L L + ++ + + +ST +L
Sbjct: 288 EKMDLEECVLITDSTLIQLSIHCPKLQALS-----LSHCELITDEGILHLSSSTCGHERL 342
Query: 191 KRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKV 242
+ LE+ ++ T+ L+ L +C LE L+L C V + K M+ P +KV
Sbjct: 343 RVLELDNCLLVTDASLEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPRVKV 395
>MGI|MGI:1919429 [details] [associations]
symbol:Fbxl2 "F-box and leucine-rich repeat protein 2"
species:10090 "Mus musculus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0006513 "protein monoubiquitination" evidence=IGI;IMP]
[GO:0016020 "membrane" evidence=ISO] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 MGI:MGI:1919429 GO:GO:0016020
GO:GO:0006511 GO:GO:0004842 GeneTree:ENSGT00700000104023
InterPro:IPR006553 SMART:SM00367 GO:GO:0006513 eggNOG:NOG300245
KO:K10268 CTD:25827 HOGENOM:HOG000230659 HOVERGEN:HBG051586
OrthoDB:EOG4KPTB9 EMBL:AK039010 EMBL:AK044693 EMBL:AK045742
EMBL:AK089994 IPI:IPI00112966 RefSeq:NP_848739.1 UniGene:Mm.386808
ProteinModelPortal:Q8BH16 SMR:Q8BH16 STRING:Q8BH16 PRIDE:Q8BH16
Ensembl:ENSMUST00000035090 Ensembl:ENSMUST00000117537 GeneID:72179
KEGG:mmu:72179 InParanoid:Q8BH16 OMA:TDNTLVQ NextBio:335633
Bgee:Q8BH16 CleanEx:MM_FBXL2 Genevestigator:Q8BH16
GermOnline:ENSMUSG00000032507 Uniprot:Q8BH16
Length = 423
Score = 125 (49.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 52/210 (24%), Positives = 95/210 (45%)
Query: 20 LIFRNLSLQEVLTVI--PGVCKSWRRAVIGPYCWQEIDIEEWSNRCQPDHLDRMVEMLIT 77
L+ R S +++T+ + K+W + WQ +D+ + Q D R+VE +
Sbjct: 19 LLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRVDLFNF----QTDVEGRVVENISK 74
Query: 78 RSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAVTF 134
R G LRKL + G D A+N +++ L L ++++DS ++ S +
Sbjct: 75 RCGGFLRKLSLRGCIGVGDSSLKTFAQNCRNIEHLNLNGCTKITDSTCYSLSRFCSKLKH 134
Query: 135 LDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLE 194
LDL+ C + +L+ I + C+ L L N L D+++++ A+ LK L
Sbjct: 135 LDLTSCVSVTNSSLKGISEGCRNLEYL--N---LSWCDQITKEG-IEALVRGCRGLKALL 188
Query: 195 M-AYHVISTEIVLKILSSCALLEFLDLRGC 223
+ + E + I + C L L+L+ C
Sbjct: 189 LRGCTQLEDEALKHIQNHCHELVSLNLQSC 218
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 47/173 (27%), Positives = 77/173 (44%)
Query: 76 ITRSSGSLRKLCVSGLHN--DMMFSLIAENAGSLQTLRLPR-SEMSDSIVAQIAGRLSAV 132
I R L+ LC+SG N D + + N LQ L R S ++D+ +A +
Sbjct: 229 ICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQVLEAARCSHLTDAGFTLLARNCHEL 288
Query: 133 TFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTM--PKL 190
+DL C I L + HC L L L + ++ + + +ST +L
Sbjct: 289 EKMDLEECVLITDSTLVQLSIHCPKLQALS-----LSHCELITDEGILHLSSSTCGHERL 343
Query: 191 KRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKV 242
+ LE+ ++ T+ L+ L +C LE L+L C V + K M+ P++KV
Sbjct: 344 RVLELDNCLLVTDASLEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKV 396
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.439 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 322 300 0.00095 115 3 11 22 0.37 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 622 (66 KB)
Total size of DFA: 250 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.75u 0.11s 21.86t Elapsed: 00:00:01
Total cpu time: 21.75u 0.11s 21.86t Elapsed: 00:00:01
Start: Fri May 10 05:51:52 2013 End: Fri May 10 05:51:53 2013