Query 020728
Match_columns 322
No_of_seqs 158 out of 755
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 07:18:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020728.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020728hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v7d_A Suppressor of kinetocho 100.0 5.5E-46 1.9E-50 327.2 14.5 149 11-160 2-162 (169)
2 2p1m_A SKP1-like protein 1A; F 100.0 3.1E-43 1.1E-47 306.3 3.3 142 14-160 2-154 (160)
3 2ast_A S-phase kinase-associat 100.0 3.5E-41 1.2E-45 292.3 13.0 143 17-160 2-155 (159)
4 1fs1_B SKP1, cyclin A/CDK2-ass 100.0 4.1E-41 1.4E-45 287.5 11.4 130 16-151 2-141 (141)
5 1hv2_A Elongin C, ELC1; protei 99.9 1.2E-25 4E-30 182.0 5.2 96 13-116 1-99 (99)
6 2fnj_C Transcription elongatio 99.9 2.5E-25 8.5E-30 179.0 5.1 94 17-116 2-96 (96)
7 1vcb_B Protein (elongin C); tu 99.9 4.4E-25 1.5E-29 182.8 5.9 96 15-116 16-112 (112)
8 4ajy_C Transcription elongatio 99.9 2.5E-22 8.5E-27 160.9 6.0 94 17-116 3-97 (97)
9 2vkp_A BTB/POZ domain-containi 98.4 2.1E-06 7.1E-11 67.5 9.7 97 15-130 8-108 (109)
10 2yy9_A Zinc finger and BTB dom 98.3 7.9E-07 2.7E-11 73.6 5.5 99 16-137 26-125 (135)
11 3htm_A Speckle-type POZ protei 98.1 1.6E-05 5.4E-10 66.9 10.6 105 16-139 35-140 (172)
12 1buo_A POZ domain, protein (pr 98.1 1.3E-05 4.6E-10 64.6 9.6 92 16-131 29-121 (121)
13 2if5_A Zinc finger and BTB dom 98.1 2.6E-05 9E-10 62.4 10.5 94 15-127 25-119 (120)
14 1r29_A B-cell lymphoma 6 prote 98.1 3.1E-05 1.1E-09 62.7 10.5 93 16-128 30-124 (127)
15 2vpk_A Myoneurin; transcriptio 98.0 5.9E-05 2E-09 60.1 10.4 92 16-128 23-115 (116)
16 4eoz_A Speckle-type POZ protei 97.9 9.8E-06 3.3E-10 66.3 5.5 102 16-136 26-128 (145)
17 2ppi_A Gigaxonin; BTB domain, 97.9 2.9E-05 9.9E-10 65.0 8.3 94 16-127 48-143 (144)
18 2q81_A MIZ-1 protein; BTB/POZ 97.9 5.3E-05 1.8E-09 61.0 9.5 89 16-128 28-117 (119)
19 3b84_A Zinc finger and BTB dom 97.9 2.8E-05 9.5E-10 62.7 7.6 90 16-128 25-115 (119)
20 3ga1_A Nucleus accumbens-assoc 97.9 2E-05 6.8E-10 64.2 6.3 92 16-129 34-126 (129)
21 2z8h_A Transcription regulator 97.8 5.8E-05 2E-09 62.3 7.9 97 16-132 37-134 (138)
22 3hve_A Gigaxonin; ubiquitin, c 97.7 8.1E-05 2.8E-09 67.0 7.9 107 15-139 31-139 (256)
23 3hqi_A Speckle-type POZ protei 97.6 0.00021 7.3E-09 66.0 9.8 105 16-139 175-280 (312)
24 3i3n_A Kelch-like protein 11; 97.6 0.0001 3.4E-09 67.4 6.8 108 16-140 33-148 (279)
25 3ohu_A Transcription regulator 97.6 2.7E-05 9.2E-10 62.9 2.7 90 16-125 33-123 (125)
26 3m5b_A Zinc finger and BTB dom 97.5 0.0001 3.5E-09 60.0 5.4 86 16-129 31-117 (119)
27 2ihc_A Transcription regulator 97.4 0.0001 3.5E-09 59.7 3.5 92 16-127 30-122 (124)
28 3fkc_A Transcriptional regulat 97.3 0.00058 2E-08 54.9 7.0 83 16-121 32-115 (116)
29 3drz_A BTB/POZ domain-containi 80.0 8.9 0.0003 30.2 8.3 95 16-128 6-105 (107)
30 3drx_A BTB/POZ domain-containi 48.5 22 0.00075 31.8 5.1 102 11-130 7-113 (202)
31 1s1g_A Potassium voltage-gated 28.3 54 0.0018 26.7 3.9 91 16-126 13-107 (124)
32 2guz_B Mitochondrial import in 26.4 84 0.0029 22.9 4.3 50 134-183 1-62 (65)
33 1wgx_A KIAA1903 protein; MYB D 23.4 43 0.0015 25.3 2.2 40 101-144 15-54 (73)
34 2cqq_A RSGI RUH-037, DNAJ homo 22.3 52 0.0018 24.4 2.5 38 102-144 16-53 (72)
35 2k9n_A MYB24; R2R3 domain, DNA 21.7 52 0.0018 25.5 2.5 35 124-158 24-65 (107)
36 2dim_A Cell division cycle 5-l 21.0 52 0.0018 23.6 2.3 31 124-154 32-69 (70)
No 1
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=100.00 E-value=5.5e-46 Score=327.24 Aligned_cols=149 Identities=26% Similarity=0.471 Sum_probs=129.9
Q ss_pred CCCCCccEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCC---CCCCcccccCCCCCHHHHHHHHHHHHhccCCCC---
Q 020728 11 PEMMKSYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMG---SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGS--- 84 (322)
Q Consensus 11 pe~~~~~IkL~SsDG~~F~Vs~eaA~qS~tIr~mL~d~g~~---~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~--- 84 (322)
|.|++++|+|+|+||++|.|+..+|++|++|++||.+.+.. .....+|||| +|++.+|++||+||+||+.++.
T Consensus 2 ~~m~~~~i~L~SsDG~~F~V~~~vA~~S~tIk~ml~~~~~~~~~~~~~~~Iplp-nV~s~iL~kVieyc~~h~~~~~~~~ 80 (169)
T 3v7d_A 2 AHMVTSNVVLVSGEGERFTVDKKIAERSLLLKNYLNDMGDDDDEDDDEIVMPVP-NVRSSVLQKVIEWAEHHRDSNFPDE 80 (169)
T ss_dssp ----CCEEEEECTTCCEEEEEHHHHTTSHHHHHHHHC-----------CEEECT-TCCHHHHHHHHHHHHHTTTCCCCC-
T ss_pred CCCCCCeEEEEeCCCCEEEecHHHHHHhHHHHHHHHhcCcccccccCCCceeeC-CCCHHHHHHHHHHHHHcccCCCccc
Confidence 45777899999999999999999999999999999877642 1123789999 8999999999999999998642
Q ss_pred ------CccccchhhhhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcCCCCCCChHhhhccc
Q 020728 85 ------SNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPL 158 (322)
Q Consensus 85 ------s~~ei~eWD~eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~VA~~IkGKTpEEIRe~FgI~~D~T~EEE~Ei~ 158 (322)
....+++||++||++++.+||+||.|||||+|++|+++||++||+||+||||+|||++|||++||||||+++++
T Consensus 81 ~~~~~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~f~I~nd~t~eEe~~ir 160 (169)
T 3v7d_A 81 DDDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIR 160 (169)
T ss_dssp -------CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHHHTCCCCCCHHHHHHHH
T ss_pred ccccccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHH
Confidence 23568999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cc
Q 020728 159 KN 160 (322)
Q Consensus 159 k~ 160 (322)
++
T Consensus 161 ~e 162 (169)
T 3v7d_A 161 RE 162 (169)
T ss_dssp TT
T ss_pred Hh
Confidence 86
No 2
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=100.00 E-value=3.1e-43 Score=306.35 Aligned_cols=142 Identities=35% Similarity=0.572 Sum_probs=82.6
Q ss_pred CCccEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCC----------
Q 020728 14 MKSYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPG---------- 83 (322)
Q Consensus 14 ~~~~IkL~SsDG~~F~Vs~eaA~qS~tIr~mL~d~g~~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~---------- 83 (322)
.+++|+|+|+||+.|.|++.+|++|++|++|+.+.+ ...+|||| +|++.+|++||+||+||+.++
T Consensus 2 ~~~~v~L~SsDg~~f~v~~~vA~~S~~ik~ml~~~~----~~~~Ipl~-~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~ 76 (160)
T 2p1m_A 2 SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDC----VDNGVPLP-NVTSKILAKVIEYCKRHVEAAASKAEAVEGA 76 (160)
T ss_dssp ------CCC---------CHHHHTCTTTC----------------CCT-TSCHHHHHHHHHC------------------
T ss_pred CCCEEEEEcCCCCEEEECHHHHHHhHHHHHHHHccC----CCCceeCC-cCcHHHHHHHHHHHHHcccCCCccccccccc
Confidence 356899999999999999999999999999997654 24589999 899999999999999999653
Q ss_pred -CCccccchhhhhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcCCCCCCChHhhhccccc
Q 020728 84 -SSNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPLKN 160 (322)
Q Consensus 84 -~s~~ei~eWD~eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~VA~~IkGKTpEEIRe~FgI~~D~T~EEE~Ei~k~ 160 (322)
.....+++||++|++++..+||+||.|||||+|++|+++||++||++|+||||+|||++|||++||||||+++++++
T Consensus 77 ~~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t~eEe~~ir~e 154 (160)
T 2p1m_A 77 ATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRE 154 (160)
T ss_dssp ------------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCCHHHHHHHHHH
T ss_pred ccccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHHHh
Confidence 13456889999999999999999999999999999999999999999999999999999999999999999998885
No 3
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=100.00 E-value=3.5e-41 Score=292.26 Aligned_cols=143 Identities=35% Similarity=0.571 Sum_probs=128.1
Q ss_pred cEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCC-CCCCcccccCCCCCHHHHHHHHHHHHhccCCCC----------C
Q 020728 17 YIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMG-SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGS----------S 85 (322)
Q Consensus 17 ~IkL~SsDG~~F~Vs~eaA~qS~tIr~mL~d~g~~-~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~----------s 85 (322)
.|+|+|+||+.|.|++.+|.+|++|++|+.+.|+. .+...+|||| +|++.+|++||+||.||+.++. .
T Consensus 2 ~v~L~ssDg~~f~v~~~vA~~S~~i~~m~~~~~~~~e~~~~~Ipl~-~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~ 80 (159)
T 2ast_A 2 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLP-NVNAAILKKVIQWCTHHKDDPPPPEDDENKEKR 80 (159)
T ss_dssp EEEEECTTSCEEEEEHHHHHTCHHHHHHTTSSCSS------CEECT-TSCHHHHHHHHHHHHHTTTCCC-----------
T ss_pred eEEEEcCCCCEEEeCHHHHHHhHHHHHHHHhcCCcccccCCCcCCC-CccHHHHHHHHHHHHHcCcCCCCcccccccccc
Confidence 49999999999999999999999999998875544 3345789999 8999999999999999996542 2
Q ss_pred ccccchhhhhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcCCCCCCChHhhhccccc
Q 020728 86 NKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTEEEKLEPLKN 160 (322)
Q Consensus 86 ~~ei~eWD~eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~VA~~IkGKTpEEIRe~FgI~~D~T~EEE~Ei~k~ 160 (322)
...+++||++|++++...||+||.|||||+|++|+++||++||++|+||||+|||++|||++||||||+++++++
T Consensus 81 ~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~eEe~~ir~e 155 (159)
T 2ast_A 81 TDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKE 155 (159)
T ss_dssp CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCTTHHHHHHHH
T ss_pred hhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHHHHHHHh
Confidence 457899999999999999999999999999999999999999999999999999999999999999999998875
No 4
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=100.00 E-value=4.1e-41 Score=287.47 Aligned_cols=130 Identities=35% Similarity=0.580 Sum_probs=110.4
Q ss_pred ccEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCC----------C
Q 020728 16 SYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGS----------S 85 (322)
Q Consensus 16 ~~IkL~SsDG~~F~Vs~eaA~qS~tIr~mL~d~g~~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~----------s 85 (322)
+.|+|+|+||+.|.|++.+|++|++|++|+.+.| ..+|||| +|++.+|++||+||+||+.++. .
T Consensus 2 ~~v~L~SsDg~~f~v~~~vA~~S~~ik~ml~~~~-----~~~Ipl~-~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~ 75 (141)
T 1fs1_B 2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLG-----MDPVPLP-NVNAAILKKVIQWCTHHKDDPPPPEDDENKEKR 75 (141)
T ss_dssp CEEEEECTTSCEEEEEGGGGGTCHHHHHHHHHTC-----CSSEECT-TCCHHHHHHHHHHHHHHTTCC------------
T ss_pred CeEEEEeCCCCEEEecHHHHHHhHHHHHHHHhcC-----CCceecC-CcCHHHHHHHHHHHHHhccCCCccccccccccc
Confidence 3699999999999999999999999999998764 4589999 8999999999999999997531 2
Q ss_pred ccccchhhhhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcCCCCCCCh
Q 020728 86 NKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFHLPDDLTE 151 (322)
Q Consensus 86 ~~ei~eWD~eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~VA~~IkGKTpEEIRe~FgI~~D~T~ 151 (322)
...+++||++|++++..+||+||.|||||+|++|+++||++||++|+||||+|||++|||++||||
T Consensus 76 ~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeiR~~f~I~~d~tp 141 (141)
T 1fs1_B 76 TDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTE 141 (141)
T ss_dssp -----HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHHHHHTC-------
T ss_pred hhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCC
Confidence 456899999999999999999999999999999999999999999999999999999999999997
No 5
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=99.91 E-value=1.2e-25 Score=182.00 Aligned_cols=96 Identities=20% Similarity=0.296 Sum_probs=83.7
Q ss_pred CCCccEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCC---CCcccc
Q 020728 13 MMKSYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPG---SSNKER 89 (322)
Q Consensus 13 ~~~~~IkL~SsDG~~F~Vs~eaA~qS~tIr~mL~d~g~~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~---~s~~ei 89 (322)
|++++|+|+|+||++|.|++++|++|++|++|+.+ |+ .+...+|||| +|++.+|++||+||+||+.++ .....+
T Consensus 1 m~~~~v~L~SsDg~~f~V~~~vA~~S~~ik~ml~~-~~-e~~~~~Iplp-~V~~~iL~kVieyc~~h~~~~~~~~~~~~i 77 (99)
T 1hv2_A 1 MSQDFVTLVSKDDKEYEISRSAAMISPTLKAMIEG-PF-RESKGRIELK-QFDSHILEKAVEYLNYNLKYSGVSEDDDEI 77 (99)
T ss_dssp CCCSEEEEEETTTEEEEEEHHHHTTCHHHHHHHHS-ST-TTCTTEEEET-TSCHHHHHHHHHHHHHHHHHHHHCSSCSSC
T ss_pred CCCcEEEEEecCCCEEEECHHHHHHhHHHHHHHhc-cc-ccCCCceecC-CcCHHHHHHHHHHHHHhcccCCCccccccC
Confidence 45679999999999999999999999999999987 54 3245789999 899999999999999999642 223567
Q ss_pred chhhhhhccCChHHHHHHHhhcccCCC
Q 020728 90 KSFDEKFIRMDTKRLCELTSAADSLQL 116 (322)
Q Consensus 90 ~eWD~eFL~iD~~~LfeLI~AAnyLdI 116 (322)
++| ++++.+||+||.|||||+|
T Consensus 78 ~~w-----~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 78 PEF-----EIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCC-----CCCHHHHHHHHHHHHHHCC
T ss_pred CCc-----cCCHHHHHHHHHHHHHhCc
Confidence 888 7999999999999999997
No 6
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=99.91 E-value=2.5e-25 Score=179.02 Aligned_cols=94 Identities=21% Similarity=0.240 Sum_probs=80.2
Q ss_pred cEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCC-CCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCccccchhhhh
Q 020728 17 YIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGM-GSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDEK 95 (322)
Q Consensus 17 ~IkL~SsDG~~F~Vs~eaA~qS~tIr~mL~d~g~-~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s~~ei~eWD~e 95 (322)
+|+|+|+||++|.|++++|++|++|++|+.+.|. .+....+|||| +|++.+|++||+||+||+.++.+..++++|
T Consensus 2 ~v~L~SsDg~~f~V~~~~A~~S~~ik~ml~~~~~~~e~~~~~Ipl~-~V~~~iL~kVieyc~~h~~~~~~~~~i~~w--- 77 (96)
T 2fnj_C 2 YVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR-EIPSHVLSKVCMYFTYKVRYTNSSTEIPEF--- 77 (96)
T ss_dssp EEEEECTTSCEEEEEHHHHTTSHHHHHHHHCC--------CEEECS-SCCHHHHHHHHHHHHHHHHHHSCCSCCCCC---
T ss_pred eEEEEecCCCEEEeCHHHHHHhHHHHHHHHccCCcccccCCceeCC-CCCHHHHHHHHHHHHHccccCCCcccCCCc---
Confidence 7999999999999999999999999999987654 23334689999 899999999999999999654445678888
Q ss_pred hccCChHHHHHHHhhcccCCC
Q 020728 96 FIRMDTKRLCELTSAADSLQL 116 (322)
Q Consensus 96 FL~iD~~~LfeLI~AAnyLdI 116 (322)
++++.+||+||.|||||+|
T Consensus 78 --~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 78 --PIAPEIALELLMAANFLDC 96 (96)
T ss_dssp --CCCTTTHHHHHHHHHHHTC
T ss_pred --ccCHHHHHHHHHHHHHhCc
Confidence 7999999999999999997
No 7
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=99.91 E-value=4.4e-25 Score=182.76 Aligned_cols=96 Identities=21% Similarity=0.228 Sum_probs=81.6
Q ss_pred CccEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCC-CCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCccccchhh
Q 020728 15 KSYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGM-GSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (322)
Q Consensus 15 ~~~IkL~SsDG~~F~Vs~eaA~qS~tIr~mL~d~g~-~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s~~ei~eWD 93 (322)
+++|+|+|+||++|.|++++|++|++|++||.+.+. .+....+|||| +|++.+|++||+||+||+.++.+..++++|
T Consensus 16 ~~~v~L~SsDG~~F~V~~~~A~~S~tIk~ml~~~~~~~e~~~~~Iplp-nV~s~iL~kVieyc~~h~~~~~~~~~i~~w- 93 (112)
T 1vcb_B 16 AMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR-EIPSHVLSKVCMYFTYKVRYTNSSTEIPEF- 93 (112)
T ss_dssp -CEEEEECTTSCEEEEEHHHHHTSHHHHHHSSCC--------CEEECS-SCCHHHHHHHHHHHHHHHHHSSCSSCCCCC-
T ss_pred CCEEEEEcCCCCEEEECHHHHHHhHHHHHHHHhcCCcccccCCceeCC-CCCHHHHHHHHHHHHHhhhccCCcCCCCCc-
Confidence 579999999999999999999999999999987654 22234689999 899999999999999999765555678888
Q ss_pred hhhccCChHHHHHHHhhcccCCC
Q 020728 94 EKFIRMDTKRLCELTSAADSLQL 116 (322)
Q Consensus 94 ~eFL~iD~~~LfeLI~AAnyLdI 116 (322)
++++.+||+||.|||||+|
T Consensus 94 ----~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 94 ----PIAPEIALELLMAANFLDC 112 (112)
T ss_dssp ----CCCHHHHHHHHHHHHHHTC
T ss_pred ----ccCHHHHHHHHHHHHHhCc
Confidence 7999999999999999997
No 8
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.86 E-value=2.5e-22 Score=160.95 Aligned_cols=94 Identities=21% Similarity=0.240 Sum_probs=79.9
Q ss_pred cEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcCC-CCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCccccchhhhh
Q 020728 17 YIWLQTADGSIQQVEQEVAMFCPLICQEVIQKGM-GSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDEK 95 (322)
Q Consensus 17 ~IkL~SsDG~~F~Vs~eaA~qS~tIr~mL~d~g~-~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s~~ei~eWD~e 95 (322)
+|+|+|+||++|.|++.+|.+|++|++|+.+.|. .+....+|||| +|++.+|++||+||.||+.++.+..++++|
T Consensus 3 ~v~L~SsDg~~F~v~r~vA~~S~~ik~m~~~~~~~~E~~~~~I~l~-~V~~~iL~kViey~~~h~~~~~~~~~i~~~--- 78 (97)
T 4ajy_C 3 YVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR-EIPSHVLSKVCMYFTYKVRYTNSSTEIPEF--- 78 (97)
T ss_dssp EEEEECTTCCEEEEEHHHHTTSHHHHHHHCCC--------CEEECT-TSCHHHHHHHHHHHHHHHHHTTCCSCCCCC---
T ss_pred EEEEEecCCcEEEecHHHHHHhHHHHHHHHhCCCccccCCCceECC-CCCHHHHHHHHHHHHHhcccCCCcCCCCcC---
Confidence 7999999999999999999999999999876542 22346789999 899999999999999999766555678999
Q ss_pred hccCChHHHHHHHhhcccCCC
Q 020728 96 FIRMDTKRLCELTSAADSLQL 116 (322)
Q Consensus 96 FL~iD~~~LfeLI~AAnyLdI 116 (322)
+++++.||+||.|||||+.
T Consensus 79 --~i~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 79 --PIAPEIALELLMAANFLDC 97 (97)
T ss_dssp --CCCGGGHHHHHHHHHHHTC
T ss_pred --cCCHHHHHHHHHHHhhhCC
Confidence 5899999999999999983
No 9
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=98.37 E-value=2.1e-06 Score=67.50 Aligned_cols=97 Identities=13% Similarity=0.141 Sum_probs=77.5
Q ss_pred CccEEEEeCCC---CEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCccccc
Q 020728 15 KSYIWLQTADG---SIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERK 90 (322)
Q Consensus 15 ~~~IkL~SsDG---~~F~Vs~eaA~-qS~tIr~mL~d~g~~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s~~ei~ 90 (322)
.+.|+|+..+| +.|.+.+.++. .|+.++.|+.... .++. ..|.|| ++++.+++.+++|+..-...
T Consensus 8 ~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~-~e~~-~~i~l~-~~~~~~f~~~l~~iYt~~~~-------- 76 (109)
T 2vkp_A 8 MADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDL-AEVK-SEIHIP-DVEPAAFLILLKYMYSDEID-------- 76 (109)
T ss_dssp TCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC-------C-CEEEET-TSCHHHHHHHHHHHHHCCCC--------
T ss_pred cccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCc-ccCC-CeEEeC-CCCHHHHHHHHHHHcCCCcc--------
Confidence 45789998886 99999999986 7999999876432 2223 779999 79999999999999874421
Q ss_pred hhhhhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHH
Q 020728 91 SFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARI 130 (322)
Q Consensus 91 eWD~eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~VA~~ 130 (322)
++.+.+.+|+.||++|+++.|.+.|+..+...
T Consensus 77 --------~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 77 --------LEADTVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp --------CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --------CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 34467899999999999999999999998754
No 10
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=98.27 E-value=7.9e-07 Score=73.59 Aligned_cols=99 Identities=14% Similarity=0.142 Sum_probs=73.1
Q ss_pred ccEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCccccchhhh
Q 020728 16 SYIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (322)
Q Consensus 16 ~~IkL~SsDG~~F~Vs~eaA~-qS~tIr~mL~d~g~~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s~~ei~eWD~ 94 (322)
..|+|+. +|+.|.+.+.++. .|++++.|+.... ...|.|| +|++.+++.|++||.....
T Consensus 26 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~-----~~~i~l~-~~~~~~f~~lL~fiYtg~~------------- 85 (135)
T 2yy9_A 26 CDATLDV-GGLVFKAHWSVLACCSHFFQRIYGDGT-----GGSVVLP-AGFAEIFGLLLDFFYTGHL------------- 85 (135)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHTCC---------CCEEEC-GGGHHHHHHHHHHHHHSCC-------------
T ss_pred cceEEEE-CCEEEehHHHHHHHhCHHHHHHHcCCC-----CCeEEeC-CCCHHHHHHHHHHHhCCCC-------------
Confidence 4677776 6899999999765 7999998765332 4569998 7999999999999987542
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHH
Q 020728 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPE 137 (322)
Q Consensus 95 eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~VA~~IkGKTpE 137 (322)
.++.+.+.+|+.||++|+|+.|.++|++.+...+.|+++.
T Consensus 86 ---~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~~~~ 125 (135)
T 2yy9_A 86 ---ALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQAQS 125 (135)
T ss_dssp ---CCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC---------
T ss_pred ---CCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCCCCC
Confidence 2344668999999999999999999999999988887754
No 11
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=98.13 E-value=1.6e-05 Score=66.89 Aligned_cols=105 Identities=20% Similarity=0.229 Sum_probs=82.7
Q ss_pred ccEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCccccchhhh
Q 020728 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (322)
Q Consensus 16 ~~IkL~SsDG~~F~Vs~eaA-~qS~tIr~mL~d~g~~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s~~ei~eWD~ 94 (322)
..|+|+. +|+.|.+.+.++ ..|+.++.|+... ........|.|| ++++.++..+++|+......
T Consensus 35 ~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~-~~e~~~~~i~l~-~~~~~~f~~~l~~~Yt~~~~------------ 99 (172)
T 3htm_A 35 TDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE-MEESKKNRVEIN-DVEPEVFKEMMCFIYTGKAP------------ 99 (172)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSC-CCGGGTTEEEEC-SSCHHHHHHHHHHHHHSCCT------------
T ss_pred cceEEEE-CCEEEEeeHHHHHHcCHHHHHHHccC-ccccCCCeEEec-CCCHHHHHHHHHHHhCCCCC------------
Confidence 4678877 689999999987 4699999988643 222234679999 79999999999999865421
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHH
Q 020728 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEI 139 (322)
Q Consensus 95 eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~VA~~IkGKTpEEI 139 (322)
++...+.+|+.||++|+|+.|.+.|+..+...+...+.-++
T Consensus 100 ----~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~ 140 (172)
T 3htm_A 100 ----NLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEI 140 (172)
T ss_dssp ----TGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHH
T ss_pred ----CcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHH
Confidence 23456889999999999999999999999876666665544
No 12
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=98.12 E-value=1.3e-05 Score=64.59 Aligned_cols=92 Identities=16% Similarity=0.179 Sum_probs=75.9
Q ss_pred ccEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCccccchhhh
Q 020728 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (322)
Q Consensus 16 ~~IkL~SsDG~~F~Vs~eaA-~qS~tIr~mL~d~g~~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s~~ei~eWD~ 94 (322)
+.|+|.. +|+.|.+.+.++ ..|+.++.|+.. ....|.|+ ++++.+++.+++|+..-...
T Consensus 29 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~------~~~~i~l~-~~~~~~f~~ll~~~Ytg~~~------------ 88 (121)
T 1buo_A 29 CDVVIMV-DSQEFHAHRTVLACTSKMFEILFHR------NSQHYTLD-FLSPKTFQQILEYAYTATLQ------------ 88 (121)
T ss_dssp CCEEEEE-SSCEEEECHHHHHHHCHHHHHHTTS------CCSEEEEC-SSCHHHHHHHHHHHHHSCCC------------
T ss_pred CCEEEEE-CCEEEehhHHHHhhcCHHHHHHHcC------CCcEEEeC-CCCHHHHHHHHHhhcCCCcC------------
Confidence 4678876 589999999987 579999998753 14578998 79999999999999875422
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHH
Q 020728 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARII 131 (322)
Q Consensus 95 eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~VA~~I 131 (322)
++.+.+.+|+.||++|+|+.|.+.|+..+..+|
T Consensus 89 ----~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~I 121 (121)
T 1buo_A 89 ----AKAEDLDDLLYAAEILEIEYLEEQCLKMLETIQ 121 (121)
T ss_dssp ----CCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred ----CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHhC
Confidence 234668999999999999999999999987764
No 13
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=98.08 E-value=2.6e-05 Score=62.38 Aligned_cols=94 Identities=12% Similarity=0.151 Sum_probs=73.8
Q ss_pred CccEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCccccchhh
Q 020728 15 KSYIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (322)
Q Consensus 15 ~~~IkL~SsDG~~F~Vs~eaA~-qS~tIr~mL~d~g~~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s~~ei~eWD 93 (322)
...|+|.. +|+.|.+.+.++. .|+.++.|+... ..+.....|.|+ ++++.+++.+++|+......
T Consensus 25 ~~Dv~l~v-~~~~~~aHk~vLaa~S~~F~~~f~~~-~~e~~~~~i~l~-~~~~~~f~~ll~~~Yt~~~~----------- 90 (120)
T 2if5_A 25 LCDVVILV-EGREFPTHRSVLAACSQYFKKLFTSG-AVVDQQNVYEID-FVSAEALTALMDFAYTATLT----------- 90 (120)
T ss_dssp SCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHC------CCSEEECC-SSCHHHHHHHHHHHHHSCCC-----------
T ss_pred CCCeEEEE-CCEEEeHHHHHHHHhCHHHHHHhcCC-ccccCCceEEeC-CCCHHHHHHHHHHHcCCCCc-----------
Confidence 35678876 5899999999986 699999987643 222245679998 79999999999999864421
Q ss_pred hhhccCChHHHHHHHhhcccCCCchHHHHHHHHH
Q 020728 94 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSRAL 127 (322)
Q Consensus 94 ~eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~V 127 (322)
++.+.+.+|+.||++|+|++|.++|.+.+
T Consensus 91 -----~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 91 -----VSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp -----CCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred -----cCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 34567899999999999999999998865
No 14
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=98.05 E-value=3.1e-05 Score=62.69 Aligned_cols=93 Identities=15% Similarity=0.231 Sum_probs=75.0
Q ss_pred ccEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCccccc-CCCCCHHHHHHHHHHHHhccCCCCCccccchhh
Q 020728 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISL-PQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (322)
Q Consensus 16 ~~IkL~SsDG~~F~Vs~eaA-~qS~tIr~mL~d~g~~~~~~~~IpL-P~nVss~iLkkIIEyCe~Hk~~~~s~~ei~eWD 93 (322)
..|+|.. +|+.|.+.+.++ ..|+.++.|+..... + ....|.| + ++++.+++.+++|+..-...
T Consensus 30 ~Dv~l~v-~~~~~~aHk~iLaa~S~~F~~~f~~~~~-e-~~~~i~l~~-~~~~~~f~~ll~~~Ytg~~~----------- 94 (127)
T 1r29_A 30 TDVVIVV-SREQFRAHKTVLMACSGLFYSIFTDQLK-R-NLSVINLDP-EINPEGFNILLDFMYTSRLN----------- 94 (127)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTSTTT-T-TCSEEECCT-TSCHHHHHHHHHHHHHSCCC-----------
T ss_pred CCEEEEE-CCEEEehHHHHHHHhCHHHHHHhcCCcc-C-CCCEEEeCC-CCCHHHHHHHHHHHcCCCcC-----------
Confidence 5678876 588999999988 479999998764322 2 3567889 6 79999999999999764321
Q ss_pred hhhccCChHHHHHHHhhcccCCCchHHHHHHHHHH
Q 020728 94 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALA 128 (322)
Q Consensus 94 ~eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~VA 128 (322)
++.+.+.+|+.||++|+|+.|.+.|+..+.
T Consensus 95 -----~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 124 (127)
T 1r29_A 95 -----LREGNIMAVMATAMYLQMEHVVDTCRKFIK 124 (127)
T ss_dssp -----CCTTTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -----cCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 344678999999999999999999998875
No 15
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=97.96 E-value=5.9e-05 Score=60.09 Aligned_cols=92 Identities=13% Similarity=0.128 Sum_probs=71.4
Q ss_pred ccEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCccccchhhh
Q 020728 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (322)
Q Consensus 16 ~~IkL~SsDG~~F~Vs~eaA-~qS~tIr~mL~d~g~~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s~~ei~eWD~ 94 (322)
..|+|+. +|+.|.+.+.++ ..|+.++.|+...+ ...-.|++| ++++.+++.+++|+..-...
T Consensus 23 ~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~~---~~~i~l~~~-~~~~~~f~~ll~~~Yt~~~~------------ 85 (116)
T 2vpk_A 23 CDCTIVI-GEFQFKAHRNVLASFSEYFGAIYRSTS---ENNVFLDQS-QVKADGFQKLLEFIYTGTLN------------ 85 (116)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCC---CSCEECCTT-TCCHHHHHHHHHHHHHSCCC------------
T ss_pred CcEEEEE-CCEEEeccHHHHhhcCHHHHHHHcCCC---CCeEEeecC-CCCHHHHHHHHHHHcCCCcc------------
Confidence 4677776 589999999997 57999999876441 112235555 69999999999999864321
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHH
Q 020728 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALA 128 (322)
Q Consensus 95 eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~VA 128 (322)
++.+.+.+|+.||++|+|+.|.+.|+..+.
T Consensus 86 ----~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 86 ----LDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp ----CCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred ----cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 344578999999999999999999998763
No 16
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=97.94 E-value=9.8e-06 Score=66.31 Aligned_cols=102 Identities=19% Similarity=0.211 Sum_probs=73.4
Q ss_pred ccEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCccccchhhh
Q 020728 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (322)
Q Consensus 16 ~~IkL~SsDG~~F~Vs~eaA-~qS~tIr~mL~d~g~~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s~~ei~eWD~ 94 (322)
..|+|+. +|+.|.+.+.++ ..|+.++.|+... ........|.|| ++++.+++.+++|+......
T Consensus 26 ~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~-~~e~~~~~i~l~-~~~~~~~~~~l~~~Y~~~~~------------ 90 (145)
T 4eoz_A 26 TDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE-MEESKKNRVEIN-DVEPEVFKEMMCFIYTGKAP------------ 90 (145)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSS-SHHHHHTEEEEC-SSCHHHHHHHHHHHHHSCCT------------
T ss_pred cceEEEE-CCEEEEeehHHHHHcCHHHHHHHcCC-CcCCCCceEEec-CCCHHHHHHHHHhhccCccC------------
Confidence 4678876 688999999998 4699999987643 211123579998 79999999999999875421
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCH
Q 020728 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTP 136 (322)
Q Consensus 95 eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~VA~~IkGKTp 136 (322)
++...+.+|+.||++|+|+.|.+.|+..+...+...+.
T Consensus 91 ----~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~ 128 (145)
T 4eoz_A 91 ----NLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENA 128 (145)
T ss_dssp ----TGGGTHHHHHHHHHHTTCHHHHHHHHCC----------
T ss_pred ----CcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHH
Confidence 23456889999999999999999999998776654443
No 17
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=97.93 E-value=2.9e-05 Score=65.00 Aligned_cols=94 Identities=24% Similarity=0.307 Sum_probs=73.4
Q ss_pred ccEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCC-CCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCccccchhh
Q 020728 16 SYIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMG-SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFD 93 (322)
Q Consensus 16 ~~IkL~SsDG~~F~Vs~eaA~-qS~tIr~mL~d~g~~-~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s~~ei~eWD 93 (322)
..|+|+. +|+.|.+.+.++. .|+.++.|+...... ......|.|+ +|++.+++.+++|+..-..
T Consensus 48 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~-~v~~~~f~~lL~fiYtg~~------------ 113 (144)
T 2ppi_A 48 CDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELE-GISVMVMREILDYIFSGQI------------ 113 (144)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECC-SSCHHHHHHHHHHHTTSCC------------
T ss_pred cceEEEE-CCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeC-CCCHHHHHHHHHHHhCCCC------------
Confidence 4677776 6899999999886 799999998654221 1235679998 7999999999999975321
Q ss_pred hhhccCChHHHHHHHhhcccCCCchHHHHHHHHH
Q 020728 94 EKFIRMDTKRLCELTSAADSLQLKPLVDLTSRAL 127 (322)
Q Consensus 94 ~eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~V 127 (322)
.++.+.+.+|+.||++|+|+.|.++|++.+
T Consensus 114 ----~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 114 ----RLNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp ----CCCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred ----CCCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 134567899999999999999999998754
No 18
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=97.92 E-value=5.3e-05 Score=60.98 Aligned_cols=89 Identities=12% Similarity=0.154 Sum_probs=73.1
Q ss_pred ccEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCccccchhhh
Q 020728 16 SYIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (322)
Q Consensus 16 ~~IkL~SsDG~~F~Vs~eaA~-qS~tIr~mL~d~g~~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s~~ei~eWD~ 94 (322)
+.|+|+. +|+.|.+.+.++. .|+.++.|+... ...|.|+ .+++.+++.+++|+..-..
T Consensus 28 ~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~------~~~i~l~-~~~~~~f~~ll~~~Ytg~~------------- 86 (119)
T 2q81_A 28 CDCTFVV-DGVHFKAHKAVLAACSEYFKMLFVDQ------KDVVHLD-ISNAAGLGQVLEFMYTAKL------------- 86 (119)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHC------CSGGGGG-GCCHHHHHHHHHHHHHSCC-------------
T ss_pred cceEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeC-CCCHHHHHHHHHHHcCCCC-------------
Confidence 4677775 6899999999875 699999998742 3568888 7999999999999986432
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHH
Q 020728 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALA 128 (322)
Q Consensus 95 eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~VA 128 (322)
.++.+.+.+|+.||++|+|+.|.+.|+..++
T Consensus 87 ---~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 87 ---SLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp ---CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred ---ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 1344568999999999999999999998874
No 19
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=97.91 E-value=2.8e-05 Score=62.65 Aligned_cols=90 Identities=14% Similarity=0.133 Sum_probs=72.6
Q ss_pred ccEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCccccchhhh
Q 020728 16 SYIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (322)
Q Consensus 16 ~~IkL~SsDG~~F~Vs~eaA~-qS~tIr~mL~d~g~~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s~~ei~eWD~ 94 (322)
..|+|.. +|+.|.+.+.++. .|+.++.|+.... ...|.|| ++++.+++.+++|+..-...
T Consensus 25 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~-----~~~i~l~-~~~~~~f~~ll~~iYtg~~~------------ 85 (119)
T 3b84_A 25 CDATLDV-GGLVFKAHWSVLACCSHFFQSLYGDGS-----GGSVVLP-AGFAEIFGLLLDFFYTGHLA------------ 85 (119)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTTT-----CCCEEEC-GGGHHHHHHHHHHHHHSCCC------------
T ss_pred cceEEEE-CCEEEEeeHHHHhhcCHHHHHHHCCCC-----CCeEEeC-CCCHHHHHHHHHHHcCCCCc------------
Confidence 4677776 6899999999875 6999999875432 4579998 79999999999999864321
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHH
Q 020728 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALA 128 (322)
Q Consensus 95 eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~VA 128 (322)
++.+.+.+|+.||++|+|+.|.+.|+..+.
T Consensus 86 ----~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (119)
T 3b84_A 86 ----LTSGNRDQVLLAARELRVPEAVELCQSFKP 115 (119)
T ss_dssp ----CCTTTHHHHHHHHHHTTCHHHHHHHHHCC-
T ss_pred ----cCHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 334558899999999999999999998764
No 20
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=97.88 E-value=2e-05 Score=64.25 Aligned_cols=92 Identities=15% Similarity=0.235 Sum_probs=69.8
Q ss_pred ccEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCccccchhhh
Q 020728 16 SYIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (322)
Q Consensus 16 ~~IkL~SsDG~~F~Vs~eaA~-qS~tIr~mL~d~g~~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s~~ei~eWD~ 94 (322)
..|+|.. +|+.|.+.+.++. .|+.++.|+... ....|.||.++++.+++.+++|+.....
T Consensus 34 ~Dv~l~v-~~~~~~~Hk~vLaa~S~~F~~~f~~~-----~~~~i~l~~~~~~~~f~~ll~~iYtg~~------------- 94 (129)
T 3ga1_A 34 CDVSVVV-KGHAFKAHRAVLAASSSYFRDLFNNS-----RSAVVELPAAVQPQSFQQILSFCYTGRL------------- 94 (129)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHBHHHHHHHHHC-----CCSEEECCTTCCHHHHHHHHHHHHHSEE-------------
T ss_pred cceEEEE-CCEEEEehHHHHHHcCHHHHHHHcCC-----CCCEEEECCCCCHHHHHHHHHHHhCCcc-------------
Confidence 4677776 7999999999886 799999988754 2557889746999999999999976431
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHHH
Q 020728 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALAR 129 (322)
Q Consensus 95 eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~VA~ 129 (322)
.++.+.+.+|+.||++|+|+.|.+.|+..+..
T Consensus 95 ---~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 95 ---SMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp ---ECCTTTHHHHHHHHHHTTBTTSSCC-------
T ss_pred ---ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 23445689999999999999999999988754
No 21
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=97.79 E-value=5.8e-05 Score=62.28 Aligned_cols=97 Identities=8% Similarity=0.159 Sum_probs=76.5
Q ss_pred ccEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCccccchhhh
Q 020728 16 SYIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (322)
Q Consensus 16 ~~IkL~SsDG~~F~Vs~eaA~-qS~tIr~mL~d~g~~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s~~ei~eWD~ 94 (322)
..|+|+. +|+.|.+.+.++. .|+.++.|+.... . ....|.||..|+...++.+++|+..-..
T Consensus 37 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~-~--e~~~i~l~~~v~~~~~~~lL~~~Ytg~~------------- 99 (138)
T 2z8h_A 37 CDVTVLV-EGQRFRAHRSVLAACSSYFHSRIVGQT-D--AELTVTLPEEVTVKGFEPLIQFAYTAKL------------- 99 (138)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCC-C--TTEEEECCTTSCHHHHHHHHHHHHHSCC-------------
T ss_pred cCeEEEE-CCEEEechHHHHHHcCHHHHHHHhcCC-C--CCceEEeCCCCCHHHHHHHHHHhcCCCc-------------
Confidence 4678876 5899999999985 7999999876432 1 2456888647999999999999987542
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHh
Q 020728 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIE 132 (322)
Q Consensus 95 eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~VA~~Ik 132 (322)
.++.+.+.+|+.||++|+|+.|.+.|++.+...+.
T Consensus 100 ---~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~ 134 (138)
T 2z8h_A 100 ---ILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKFL 134 (138)
T ss_dssp ---CCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCCS
T ss_pred ---ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhcc
Confidence 13446689999999999999999999998865443
No 22
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=97.70 E-value=8.1e-05 Score=67.02 Aligned_cols=107 Identities=23% Similarity=0.268 Sum_probs=78.9
Q ss_pred CccEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCC-CCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCccccchh
Q 020728 15 KSYIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGM-GSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSF 92 (322)
Q Consensus 15 ~~~IkL~SsDG~~F~Vs~eaA~-qS~tIr~mL~d~g~-~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s~~ei~eW 92 (322)
...|+|.. +|+.|.+.+.++. .|++++.|+..... .......|.|| +|++.+++.+++|+..-..
T Consensus 31 ~~Dv~l~v-~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~-~v~~~~f~~ll~~~Yt~~~----------- 97 (256)
T 3hve_A 31 FCDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELE-GISVMVMREILDYIFSGQI----------- 97 (256)
T ss_dssp CCCEEEEE-TTEEEEECHHHHHTTCHHHHHTC-----------CEEECS-SCCHHHHHHHHHHHHHSCC-----------
T ss_pred CcceEEEE-CCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeC-CCCHHHHHHHHhhccCCCC-----------
Confidence 35678876 6899999999986 59999998754321 12235679998 7999999999999987442
Q ss_pred hhhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHH
Q 020728 93 DEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEI 139 (322)
Q Consensus 93 D~eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~VA~~IkGKTpEEI 139 (322)
.++.+.+.+|+.||++|+|+.|.+.|+..+...+.-.+.-.|
T Consensus 98 -----~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i 139 (256)
T 3hve_A 98 -----RLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGI 139 (256)
T ss_dssp -----CCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHH
T ss_pred -----cccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHH
Confidence 134456899999999999999999999999876655554444
No 23
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=97.63 E-value=0.00021 Score=65.97 Aligned_cols=105 Identities=20% Similarity=0.229 Sum_probs=80.1
Q ss_pred ccEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCccccchhhh
Q 020728 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (322)
Q Consensus 16 ~~IkL~SsDG~~F~Vs~eaA-~qS~tIr~mL~d~g~~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s~~ei~eWD~ 94 (322)
..|+|.. +|+.|.+.+.++ ..|+.++.|+... ..+.....|.|+ ++++.+++.+++|+.....+
T Consensus 175 ~Dv~l~v-~~~~f~~Hk~vLaa~S~~F~~~f~~~-~~e~~~~~i~l~-~~~~~~f~~~L~~iYt~~~~------------ 239 (312)
T 3hqi_A 175 TDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE-MEESKKNRVEIN-DVEPEVFKEMMCFIYTGKAP------------ 239 (312)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTC------CCSEEEEC-SSCHHHHHHHHHHHHHSCCT------------
T ss_pred CceEEEE-CCEEEeHHHHHHHHcCHHHHHHhccC-ccccCCceEEec-CCCHHHHHHHHHhhcCCCCC------------
Confidence 4678877 689999999988 4799999987533 222345679998 79999999999999874422
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHH
Q 020728 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEI 139 (322)
Q Consensus 95 eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~VA~~IkGKTpEEI 139 (322)
+....+.+|+.||++|+++.|..+|...+...+.-.+.-++
T Consensus 240 ----~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~ 280 (312)
T 3hqi_A 240 ----NLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEI 280 (312)
T ss_dssp ----THHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHH
T ss_pred ----ChHHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHH
Confidence 12367899999999999999999999998766555554444
No 24
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=97.58 E-value=0.0001 Score=67.35 Aligned_cols=108 Identities=15% Similarity=0.179 Sum_probs=79.2
Q ss_pred ccEEEEeC--CCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCC-----CCCHHHHHHHHHHHHhccCCCCCcc
Q 020728 16 SYIWLQTA--DGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQ-----RVNPAMLSLILDYCRFHQVPGSSNK 87 (322)
Q Consensus 16 ~~IkL~Ss--DG~~F~Vs~eaA~-qS~tIr~mL~d~g~~~~~~~~IpLP~-----nVss~iLkkIIEyCe~Hk~~~~s~~ 87 (322)
..|+|... ||+.|.+.+.++. .|+.++.|+... ..++....|.|+. .|++.++..+++|+.....
T Consensus 33 ~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~-~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~------ 105 (279)
T 3i3n_A 33 CDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQ-FSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRI------ 105 (279)
T ss_dssp CCEEEECC----CEEEECHHHHHHHCTTSGGGCCC---------EEECCCCSSTTCSCHHHHHHHHHHHHHSEE------
T ss_pred CCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCC-CccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCc------
Confidence 56888876 7999999999987 699999876432 2222345688852 5999999999999986432
Q ss_pred ccchhhhhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHH
Q 020728 88 ERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIR 140 (322)
Q Consensus 88 ei~eWD~eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~VA~~IkGKTpEEIR 140 (322)
.++...+.+|+.||++|+|+.|.+.|+..+...+...+.-.|.
T Consensus 106 ----------~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~ 148 (279)
T 3i3n_A 106 ----------RVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIH 148 (279)
T ss_dssp ----------EEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHH
T ss_pred ----------ccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHH
Confidence 1334568999999999999999999999998877766655554
No 25
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=97.58 E-value=2.7e-05 Score=62.88 Aligned_cols=90 Identities=14% Similarity=0.219 Sum_probs=70.9
Q ss_pred ccEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCccccchhhh
Q 020728 16 SYIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (322)
Q Consensus 16 ~~IkL~SsDG~~F~Vs~eaA~-qS~tIr~mL~d~g~~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s~~ei~eWD~ 94 (322)
..|+|+. +|+.|.+.+.++. .|+.++.|+..... ....|.||..|+..+++.+++|+..-..
T Consensus 33 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~---e~~~i~l~~~~~~~~f~~~l~~iYtg~~------------- 95 (125)
T 3ohu_A 33 CDVTLIV-ERKEFRAHRAVLAACSEYFWQALVGQTK---NDLVVSLPEEVTARGFGPLLQFAYTAKL------------- 95 (125)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTCCC---SSCEEECCTTCCHHHHHHHHHHHTTSEE-------------
T ss_pred cceEEEE-CCEEEechHHHHHHcCHHHHHHhcCCCC---CCcEEEeCCCCCHHHHHHHHHhHcCCce-------------
Confidence 4678876 6899999999886 69999998764321 2567899823999999999999875321
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHH
Q 020728 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSR 125 (322)
Q Consensus 95 eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck 125 (322)
.++.+.+.+|+.||++|+|+.|.+.|++
T Consensus 96 ---~~~~~~v~~ll~~A~~l~i~~L~~~C~~ 123 (125)
T 3ohu_A 96 ---LLSRENIREVIRCAEFLRMHNLEDSCFS 123 (125)
T ss_dssp ---EECTTTHHHHHHHHHHHTBSSCTTSSCC
T ss_pred ---EECHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 2345678999999999999999988864
No 26
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=97.52 E-value=0.0001 Score=59.99 Aligned_cols=86 Identities=13% Similarity=0.112 Sum_probs=68.0
Q ss_pred ccEEEEeCCCCEEEecHHHHHH-cHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCccccchhhh
Q 020728 16 SYIWLQTADGSIQQVEQEVAMF-CPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (322)
Q Consensus 16 ~~IkL~SsDG~~F~Vs~eaA~q-S~tIr~mL~d~g~~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s~~ei~eWD~ 94 (322)
..|+|.. +|+.|.+.+.++.. |.+++. ....|.|+ .|++.+++.+++|+..-.
T Consensus 31 ~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~----------~~~~i~l~-~v~~~~f~~ll~fiYtg~-------------- 84 (119)
T 3m5b_A 31 CDTLITV-GSQEFPAHSLVLAGVSQQLGR----------RGQWALGE-GISPSTFAQLLNFVYGES-------------- 84 (119)
T ss_dssp CCEEEEE-TTEEEEECHHHHHTTCGGGCC----------CEEEECCS-SCCHHHHHHHHHHHTTCC--------------
T ss_pred cceEEEE-CCEEEeeEHHHHHHcCHHHhc----------CCCEEEeC-CCCHHHHHHHHHHHcCCC--------------
Confidence 4678876 69999999988764 677652 24568898 799999999999986532
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHHHH
Q 020728 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRALAR 129 (322)
Q Consensus 95 eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~VA~ 129 (322)
+.++.+.+.+|+.||++|+|+.|.+.|++++..
T Consensus 85 --~~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 85 --VELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp --EEECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred --cCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 124557789999999999999999999998754
No 27
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=97.36 E-value=0.0001 Score=59.67 Aligned_cols=92 Identities=10% Similarity=0.202 Sum_probs=71.6
Q ss_pred ccEEEEeCCCCEEEecHHHHH-HcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCccccchhhh
Q 020728 16 SYIWLQTADGSIQQVEQEVAM-FCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (322)
Q Consensus 16 ~~IkL~SsDG~~F~Vs~eaA~-qS~tIr~mL~d~g~~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s~~ei~eWD~ 94 (322)
..|+|+. +|+.|.+.+.++. .|+.++.|+.... . ....|.+|..|+...++.+++|+..-..
T Consensus 30 ~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~mf~~~~-~--e~~~i~l~~~v~~~~f~~lL~~iYtg~~------------- 92 (124)
T 2ihc_A 30 CDVTIFV-EGQRFRAHRSVLAACSSYFHSRIVGQA-D--GELNITLPEEVTVKGFEPLIQFAYTAKL------------- 92 (124)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTC------CEEEECCTTSCHHHHHHHHHHHHHSEE-------------
T ss_pred cCEEEEE-CCEEEecHHHHHHHcCHHHHHHHcCCC-C--CCceEeecCCcCHHHHHHHHHHhcCCCc-------------
Confidence 4677776 5899999999886 7999999876432 1 2356888657999999999999986432
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHHHHHHHH
Q 020728 95 KFIRMDTKRLCELTSAADSLQLKPLVDLTSRAL 127 (322)
Q Consensus 95 eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~V 127 (322)
.++.+.+.+|+.||++|+|+.|.+.|++.+
T Consensus 93 ---~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l 122 (124)
T 2ihc_A 93 ---ILSKENVDEVCKCVEFLSVHNIEESCFQFL 122 (124)
T ss_dssp ---EEETTTHHHHHHHHHHHTBSSCCGGGGGTC
T ss_pred ---ccCHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 133456899999999999999999998754
No 28
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=97.28 E-value=0.00058 Score=54.89 Aligned_cols=83 Identities=13% Similarity=0.160 Sum_probs=66.4
Q ss_pred ccEEEEeCCCCEEEecHHHH-HHcHHHHHHHhhcCCCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCccccchhhh
Q 020728 16 SYIWLQTADGSIQQVEQEVA-MFCPLICQEVIQKGMGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSFDE 94 (322)
Q Consensus 16 ~~IkL~SsDG~~F~Vs~eaA-~qS~tIr~mL~d~g~~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s~~ei~eWD~ 94 (322)
..|+|.. +|+.|.+.+.++ ..|+.++.|+... ...|.|+ +|++.+++.+++|+..-...
T Consensus 32 ~Dv~l~v-~~~~f~aHk~vLaa~S~~F~~~f~~~------~~~i~l~-~~~~~~f~~~l~~~Ytg~~~------------ 91 (116)
T 3fkc_A 32 CDVTVIV-EDRKFRAHKNILSASSTYFHQLFSVA------GQVVELS-FIRAEIFAEILNYIYSSKIV------------ 91 (116)
T ss_dssp CCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTSC------CSEEEEC-SSCHHHHHHHHHHHTTSCCC------------
T ss_pred eeEEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC------CCEEEeC-CCCHHHHHHHHHhhcCCCcC------------
Confidence 4677776 689999999988 4799999886532 4578998 89999999999998753321
Q ss_pred hhccCChHHHHHHHhhcccCCCchHHH
Q 020728 95 KFIRMDTKRLCELTSAADSLQLKPLVD 121 (322)
Q Consensus 95 eFL~iD~~~LfeLI~AAnyLdI~~Lld 121 (322)
.++.+.+.+|+.||++|+|+.|.+
T Consensus 92 ---~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 92 ---RVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp ---SCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred ---CCCHHHHHHHHHHHHHhCccccCc
Confidence 245577899999999999999875
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=79.97 E-value=8.9 Score=30.21 Aligned_cols=95 Identities=11% Similarity=0.203 Sum_probs=64.1
Q ss_pred ccEEEEeCCCCEEEecHHHHHHc--HHHHHHHhhc-CCC--CCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCccccc
Q 020728 16 SYIWLQTADGSIQQVEQEVAMFC--PLICQEVIQK-GMG--SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERK 90 (322)
Q Consensus 16 ~~IkL~SsDG~~F~Vs~eaA~qS--~tIr~mL~d~-g~~--~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s~~ei~ 90 (322)
..|+|.= .|+.|.++...+..- ..+..|+... ... .+....+=+ +-++.+++.|+.|++.-+-..+. .
T Consensus 6 ~~v~LNV-GG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi--DRdp~~F~~IL~~lr~g~l~~p~--~-- 78 (107)
T 3drz_A 6 KWVRLNV-GGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI--DRDPTYFGPVLNYLRHGKLVINK--D-- 78 (107)
T ss_dssp CEEEEEE-TTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE--CSCHHHHHHHHHHHHHSCCCCCT--T--
T ss_pred CEEEEEE-CCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe--cCChHHHHHHHHHhCCCeeCCCC--C--
Confidence 4556554 499999999999764 3566665421 111 112344555 68999999999999986533211 1
Q ss_pred hhhhhhccCChHHHHHHHhhcccCCCchHHHHHHHHHH
Q 020728 91 SFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALA 128 (322)
Q Consensus 91 eWD~eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~VA 128 (322)
+. ...|...|.|.+|.+|++++-..|.
T Consensus 79 --------~~---~~~l~~Ea~fy~l~~L~~~l~~~i~ 105 (107)
T 3drz_A 79 --------LA---EEGVLEEAEFYNITSLIKLVKDKIR 105 (107)
T ss_dssp --------SC---HHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred --------CC---HHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 11 2467889999999999999987764
No 30
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=48.52 E-value=22 Score=31.79 Aligned_cols=102 Identities=12% Similarity=0.231 Sum_probs=67.2
Q ss_pred CCCCCccEEEEeCCCCEEEecHHHHHHcH--HHHHHHhhc-CCC--CCCCcccccCCCCCHHHHHHHHHHHHhccCCCCC
Q 020728 11 PEMMKSYIWLQTADGSIQQVEQEVAMFCP--LICQEVIQK-GMG--SSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSS 85 (322)
Q Consensus 11 pe~~~~~IkL~SsDG~~F~Vs~eaA~qS~--tIr~mL~d~-g~~--~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s 85 (322)
|...+..|+|-=. |..|.+....+..-+ .+..|+... .+. .+....+=+ +-++..++.|+.|++.-+-.-+.
T Consensus 7 ~g~~~~~V~LNVG-G~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI--DRDP~~F~~ILnyLRtG~L~lP~ 83 (202)
T 3drx_A 7 PGSVSKWVRLNVG-GTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI--DRDPTYFGPVLNYLRHGKLVINK 83 (202)
T ss_dssp SSCCCCEEEEEET-TEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE--CSCSTTHHHHHHHHHHSCCCCCT
T ss_pred CCCCCCEEEEEEC-CEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe--cCChHHHHHHHHHhcCCccCCCC
Confidence 4444566776654 999999988887642 555554321 111 112344555 58999999999999985533111
Q ss_pred ccccchhhhhhccCChHHHHHHHhhcccCCCchHHHHHHHHHHHH
Q 020728 86 NKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARI 130 (322)
Q Consensus 86 ~~ei~eWD~eFL~iD~~~LfeLI~AAnyLdI~~LldL~ck~VA~~ 130 (322)
. +. ...|...|.|.+|.+|++++-..+...
T Consensus 84 --~----------~~---~~~l~eEA~FygL~~Lv~~l~~~i~er 113 (202)
T 3drx_A 84 --D----------LA---EEGVLEEAEFYNITSLIKLVKDKIRER 113 (202)
T ss_dssp --T----------SC---HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --C----------CC---HHHHHHHHHHCCcHHHHHHHHHHHHHH
Confidence 1 11 235788999999999999999888653
No 31
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=28.30 E-value=54 Score=26.67 Aligned_cols=91 Identities=10% Similarity=0.042 Sum_probs=57.3
Q ss_pred ccEEEEeCCCCEEEecHHHHHHcHHHHHHHhhcC---CCCCCCcccccCCCCCHHHHHHHHHHHHhccCCCCCccccchh
Q 020728 16 SYIWLQTADGSIQQVEQEVAMFCPLICQEVIQKG---MGSSKNYAISLPQRVNPAMLSLILDYCRFHQVPGSSNKERKSF 92 (322)
Q Consensus 16 ~~IkL~SsDG~~F~Vs~eaA~qS~tIr~mL~d~g---~~~~~~~~IpLP~nVss~iLkkIIEyCe~Hk~~~~s~~ei~eW 92 (322)
..|+| --.|..|.++...+..-+- .+|...+ ........+-+ +-++..++.|+.|++.-+-.-+ .
T Consensus 13 ~~V~L-NVGG~~F~t~~~TL~~~p~--S~L~~~~~~~~~~~~~g~~Fi--DRdp~~F~~ILnflR~G~l~~p------~- 80 (124)
T 1s1g_A 13 ELIVL-NVSGRRFQTWRTTLERYPD--TLLGSTEKEFFFNEDTKEYFF--DRDPEVFRCVLNFYRTGKLHYP------R- 80 (124)
T ss_dssp CEEEE-EETTEEEEEEHHHHTTSTT--SSTTSSGGGGTBCSSSCSEEE--CSCHHHHHHHHHHHHHSCBCCC------T-
T ss_pred CEEEE-EeCCEEEEEeHHHHhcCCC--ceecccCCcccccCCCCcEEE--cCChHHHHHHHHHHhcCCCCCC------C-
Confidence 34544 4559999999988865321 0111111 00112345555 5799999999999998543211 1
Q ss_pred hhhhccCChHHHHHHHhhcccCCCchH-HHHHHHH
Q 020728 93 DEKFIRMDTKRLCELTSAADSLQLKPL-VDLTSRA 126 (322)
Q Consensus 93 D~eFL~iD~~~LfeLI~AAnyLdI~~L-ldL~ck~ 126 (322)
.+ .+-.|...|.|.+|.+| ++.||..
T Consensus 81 -----~~---~~~~l~~Ea~fy~i~~l~l~~cC~~ 107 (124)
T 1s1g_A 81 -----YE---CISAYDDELAFYGILPEIIGDCCYE 107 (124)
T ss_dssp -----TS---CHHHHHHHHHHTTCCGGGBCHHHHH
T ss_pred -----Cc---CHHHHHHHHHHcCCChHHHHHHHHH
Confidence 01 25678899999999998 4777754
No 32
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=26.43 E-value=84 Score=22.86 Aligned_cols=50 Identities=16% Similarity=0.205 Sum_probs=30.6
Q ss_pred CCHHHHHhHcCCCCC---CChHhhhccccc--CCCChh-------HHHHHHHHHHHHHHHHH
Q 020728 134 KTPEEIREIFHLPDD---LTEEEKLEPLKN--TTDDPR-------IRLLNRLYAKKRKELKE 183 (322)
Q Consensus 134 KTpEEIRe~FgI~~D---~T~EEE~Ei~k~--~~~dp~-------~~~ln~~~~~~~~e~~~ 183 (322)
.|.+|=+.++||... .|.++-.+.-+. ..++|+ ...+|+.+.+..++++.
T Consensus 1 mt~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl~~ki~~Ake~l~~~~~~ 62 (65)
T 2guz_B 1 MTLDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQSKVYRAAERLKWELAQ 62 (65)
T ss_dssp CCHHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 367788889999877 677655543333 346777 44666655544444443
No 33
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=23.38 E-value=43 Score=25.27 Aligned_cols=40 Identities=13% Similarity=0.113 Sum_probs=26.8
Q ss_pred hHHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcC
Q 020728 101 TKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFH 144 (322)
Q Consensus 101 ~~~LfeLI~AAnyLdI~~LldL~ck~VA~~IkGKTpEEIRe~Fg 144 (322)
...+|+-..|..-.+-+.-. ..||..+-|||++|+++.|.
T Consensus 15 E~k~fe~ALa~~~~~tp~rW----e~IA~~V~gKT~eE~~~hY~ 54 (73)
T 1wgx_A 15 ELQKLHCAFASLPKHKPGFW----SEVAAAVGSRSPEECQRKYM 54 (73)
T ss_dssp HHHHHHHHHHHSCSSSSSHH----HHHHHHTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCccHH----HHHHHHcCCCCHHHHHHHHH
Confidence 44566665555444444433 56888889999999987554
No 34
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=22.27 E-value=52 Score=24.43 Aligned_cols=38 Identities=5% Similarity=-0.084 Sum_probs=22.5
Q ss_pred HHHHHHHhhcccCCCchHHHHHHHHHHHHHhCCCHHHHHhHcC
Q 020728 102 KRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIFH 144 (322)
Q Consensus 102 ~~LfeLI~AAnyLdI~~LldL~ck~VA~~IkGKTpEEIRe~Fg 144 (322)
..+|+-+.|-.--+-+.- -..||..+ |+|++|++..|.
T Consensus 16 ~k~fe~al~~~p~~t~~R----W~~IA~~l-gRt~~eV~~~y~ 53 (72)
T 2cqq_A 16 LSQLTRSMVKFPGGTPGR----WEKIAHEL-GRSVTDVTTKAK 53 (72)
T ss_dssp HHHHHHHHHHSCTTCTTH----HHHHHHHH-TSCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcH----HHHHHHHh-CCCHHHHHHHHH
Confidence 445544444333333332 34567766 999999998764
No 35
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=21.68 E-value=52 Score=25.55 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=26.3
Q ss_pred HHHHHHHHhCCCHHHHHhHcC------C-CCCCChHhhhccc
Q 020728 124 SRALARIIEGKTPEEIREIFH------L-PDDLTEEEKLEPL 158 (322)
Q Consensus 124 ck~VA~~IkGKTpEEIRe~Fg------I-~~D~T~EEE~Ei~ 158 (322)
-..||..+.|.|+.++|+.|. | ...+|+||...++
T Consensus 24 W~~Ia~~~~~Rt~~qcr~Rw~~~L~p~i~~~~WT~eEd~~L~ 65 (107)
T 2k9n_A 24 WIRISQLMITRNPRQCRERWNNYINPALRTDPWSPEEDMLLD 65 (107)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHSSSCCTTCCCCHHHHHHHH
T ss_pred HHHHhhhcCCCCHHHHHHHHHHHHcccccccccCHHHHHHHH
Confidence 456888889999999999653 2 2479998887544
No 36
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.98 E-value=52 Score=23.62 Aligned_cols=31 Identities=6% Similarity=0.207 Sum_probs=23.0
Q ss_pred HHHHHHHHhCCCHHHHHhHcC------CC-CCCChHhh
Q 020728 124 SRALARIIEGKTPEEIREIFH------LP-DDLTEEEK 154 (322)
Q Consensus 124 ck~VA~~IkGKTpEEIRe~Fg------I~-~D~T~EEE 154 (322)
-..||..+.|+|+.++|..|. |. ..+|+||.
T Consensus 32 W~~Ia~~l~~Rt~~qcr~Rw~~~L~p~i~~~~wt~eEd 69 (70)
T 2dim_A 32 WSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSGPSS 69 (70)
T ss_dssp HHHHHHHSTTCCHHHHHHHHHHTSCSSSCCCCSCCSCC
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHcCCcccCCCCChHhc
Confidence 467899999999999999653 22 35777764
Done!