Your job contains 1 sequence.
>020730
MGDSNKDSCSFLSEKSAKIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDV
ESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGS
SCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLY
GPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDE
YDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWR
AKIELRDGLADTYKWYLENVKQ
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020730
(322 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2030973 - symbol:GER2 species:3702 "Arabidopsi... 1386 9.9e-142 1
TAIR|locus:2197264 - symbol:GER1 ""GDP-4-keto-6-deoxymann... 1369 6.3e-140 1
TIGR_CMR|GSU_0627 - symbol:GSU_0627 "GDP-fucose synthetas... 1053 1.9e-106 1
UNIPROTKB|P32055 - symbol:fcl "Fcl" species:83333 "Escher... 908 4.5e-91 1
TIGR_CMR|CBU_0688 - symbol:CBU_0688 "GDP-fucose synthetas... 787 3.0e-78 1
TIGR_CMR|CJE_1612 - symbol:CJE_1612 "GDP-L-fucose synthet... 531 1.4e-74 2
UNIPROTKB|Q47WH1 - symbol:CPS_4200 "NAD-dependent epimera... 545 1.3e-52 1
TIGR_CMR|CPS_4200 - symbol:CPS_4200 "NAD-dependent epimer... 545 1.3e-52 1
RGD|1307028 - symbol:Tsta3 "tissue specific transplantati... 471 9.1e-45 1
UNIPROTKB|Q13630 - symbol:TSTA3 "GDP-L-fucose synthase" s... 470 1.2e-44 1
UNIPROTKB|Q2KIT8 - symbol:TSTA3 "Tissue specific transpla... 462 8.1e-44 1
UNIPROTKB|E2RM30 - symbol:TSTA3 "Uncharacterized protein"... 460 1.3e-43 1
DICTYBASE|DDB_G0270184 - symbol:ger "GDP-keto-6-deoxymann... 459 1.7e-43 1
MGI|MGI:98857 - symbol:Tsta3 "tissue specific transplanta... 456 3.5e-43 1
FB|FBgn0034794 - symbol:Gmer "GDP-4-keto-6-deoxy-D-mannos... 437 3.6e-41 1
ZFIN|ZDB-GENE-050417-317 - symbol:zgc:110348 "zgc:110348"... 431 1.6e-40 1
ZFIN|ZDB-GENE-071004-107 - symbol:zgc:173683 "zgc:173683"... 428 3.3e-40 1
ZFIN|ZDB-GENE-061013-348 - symbol:zgc:153776 "zgc:153776"... 426 5.3e-40 1
ZFIN|ZDB-GENE-040722-1 - symbol:tsta3 "tissue specific tr... 424 8.7e-40 1
UNIPROTKB|E9PKL9 - symbol:TSTA3 "GDP-L-fucose synthase" s... 420 2.3e-39 1
UNIPROTKB|F1NYB5 - symbol:TSTA3 "Uncharacterized protein"... 413 1.3e-38 1
WB|WBGene00019813 - symbol:ger-1 species:6239 "Caenorhabd... 373 2.2e-34 1
UNIPROTKB|I3LGP6 - symbol:TSTA3 "Uncharacterized protein"... 364 2.0e-33 1
GENEDB_PFALCIPARUM|PF10_0137 - symbol:PF10_0137 "GDP-fuco... 322 5.6e-29 1
UNIPROTKB|Q8IJQ5 - symbol:PF10_0137 "GDP-fucose synthase,... 322 5.6e-29 1
UNIPROTKB|E9PP14 - symbol:TSTA3 "GDP-L-fucose synthase" s... 276 4.2e-24 1
TIGR_CMR|BA_0507 - symbol:BA_0507 "NAD-dependent epimeras... 253 1.1e-21 1
ZFIN|ZDB-GENE-030131-5718 - symbol:tgds "TDP-glucose 4,6-... 251 1.9e-21 1
TIGR_CMR|CHY_0979 - symbol:CHY_0979 "dTDP-glucose 4,6-deh... 248 3.9e-21 1
UNIPROTKB|Q6MWV3 - symbol:galE1 "UDP-glucose 4-epimerase"... 247 4.9e-21 1
MGI|MGI:1923605 - symbol:Tgds "TDP-glucose 4,6-dehydratas... 241 2.1e-20 1
UNIPROTKB|A6QLW2 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 238 4.4e-20 1
UNIPROTKB|E2QWQ8 - symbol:TGDS "Uncharacterized protein" ... 238 4.4e-20 1
RGD|1306544 - symbol:Tgds "TDP-glucose 4,6-dehydratase" s... 238 4.4e-20 1
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 235 2.6e-19 1
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 235 3.8e-19 1
TAIR|locus:2150441 - symbol:GME ""GDP-D-mannose 3',5'-epi... 234 8.3e-19 1
TIGR_CMR|CBU_0829 - symbol:CBU_0829 "NAD dependent epimer... 220 1.4e-18 2
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 230 4.0e-18 1
TIGR_CMR|CJE_1513 - symbol:CJE_1513 "NAD-dependent epimer... 211 1.2e-15 1
UNIPROTKB|Q9ZAE8 - symbol:acbB "dTDP-glucose 4,6-dehydrat... 195 4.8e-15 2
UNIPROTKB|P29782 - symbol:strE "dTDP-glucose 4,6-dehydrat... 190 4.0e-14 2
WB|WBGene00008132 - symbol:gale-1 species:6239 "Caenorhab... 178 2.9e-13 2
TIGR_CMR|CHY_0545 - symbol:CHY_0545 "UDP-glucose 4-epimer... 186 2.2e-12 1
TAIR|locus:2099372 - symbol:RHM3 "rhamnose biosynthesis 3... 190 4.2e-12 1
UNIPROTKB|B3KV61 - symbol:UXS1 "UDP-glucuronate decarboxy... 184 5.7e-12 1
UNIPROTKB|F1SU22 - symbol:UXS1 "Uncharacterized protein" ... 184 7.4e-12 1
UNIPROTKB|E1BMI4 - symbol:UXS1 "Uncharacterized protein" ... 184 8.6e-12 1
UNIPROTKB|Q8NBZ7 - symbol:UXS1 "UDP-glucuronic acid decar... 184 8.6e-12 1
MGI|MGI:1915133 - symbol:Uxs1 "UDP-glucuronate decarboxyl... 184 8.6e-12 1
RGD|628680 - symbol:Uxs1 "UDP-glucuronate decarboxylase 1... 184 8.6e-12 1
UNIPROTKB|Q5PQX0 - symbol:Uxs1 "UDP-glucuronic acid decar... 184 8.6e-12 1
TAIR|locus:2014235 - symbol:RHD1 "ROOT HAIR DEFECTIVE 1" ... 174 1.0e-11 2
UNIPROTKB|E1BV28 - symbol:UXS1 "Uncharacterized protein" ... 182 1.5e-11 1
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 185 1.6e-11 1
TIGR_CMR|GSU_1975 - symbol:GSU_1975 "NAD-dependent epimer... 179 1.7e-11 1
UNIPROTKB|P37759 - symbol:rfbB "RmlB" species:83333 "Esch... 161 3.8e-11 2
ZFIN|ZDB-GENE-060421-6479 - symbol:gale "UDP-galactose-4-... 163 3.8e-11 2
UNIPROTKB|Q9HTB6 - symbol:rmd "GDP-6-deoxy-D-mannose redu... 174 4.7e-11 1
UNIPROTKB|P26391 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 161 6.1e-11 2
UNIPROTKB|P37777 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 159 6.7e-11 2
UNIPROTKB|F1PU61 - symbol:UXS1 "Uncharacterized protein" ... 176 7.2e-11 1
TIGR_CMR|GSU_1815 - symbol:GSU_1815 "NAD-dependent epimer... 172 8.9e-11 1
TAIR|locus:2202960 - symbol:RHM1 "rhamnose biosynthesis 1... 177 1.4e-10 1
UNIPROTKB|F1PI88 - symbol:GALE "Uncharacterized protein" ... 158 1.5e-10 2
UNIPROTKB|E9PLH9 - symbol:TSTA3 "GDP-L-fucose synthase" s... 153 1.5e-10 1
ZFIN|ZDB-GENE-020419-37 - symbol:uxs1 "UDP-glucuronic aci... 173 1.6e-10 1
DICTYBASE|DDB_G0275295 - symbol:galE "UDP-glucose 4-epime... 153 1.8e-10 2
UNIPROTKB|F1NWE5 - symbol:GALE "Uncharacterized protein" ... 163 3.3e-10 2
WB|WBGene00015298 - symbol:C01F1.3 species:6239 "Caenorha... 173 3.5e-10 1
TIGR_CMR|GSU_2240 - symbol:GSU_2240 "UDP-glucose 4-epimer... 167 4.2e-10 1
DICTYBASE|DDB_G0279465 - symbol:tgds "putative dTDP-D-glu... 136 5.1e-10 2
UNIPROTKB|P37761 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 150 8.6e-10 2
TAIR|locus:2053275 - symbol:UXS6 "UDP-XYL synthase 6" spe... 164 1.1e-09 1
UNIPROTKB|P55293 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 149 1.1e-09 2
FB|FBgn0035848 - symbol:CG7979 species:7227 "Drosophila m... 166 1.2e-09 1
TAIR|locus:2138121 - symbol:UGE2 "UDP-D-glucose/UDP-D-gal... 156 2.3e-09 2
TAIR|locus:2078206 - symbol:UXS5 "UDP-XYL synthase 5" spe... 161 2.4e-09 1
TIGR_CMR|BA_5505 - symbol:BA_5505 "UDP-glucose 4-epimeras... 160 2.9e-09 1
TAIR|locus:2168539 - symbol:UXS3 "UDP-glucuronic acid dec... 160 3.6e-09 1
TIGR_CMR|CJE_1273 - symbol:CJE_1273 "UDP-glucose 4-epimer... 154 3.7e-09 2
UNIPROTKB|P44914 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 150 4.0e-09 2
UNIPROTKB|Q9S642 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 143 4.5e-09 2
UNIPROTKB|Q0BYW6 - symbol:HNE_2639 "UDP-glucuronate 5'-ep... 148 8.5e-09 2
CGD|CAL0000450 - symbol:GAL102 species:5476 "Candida albi... 155 1.0e-08 1
UNIPROTKB|Q59VY4 - symbol:TGD99 "Putative uncharacterized... 155 1.0e-08 1
UNIPROTKB|Q3T105 - symbol:GALE "Uncharacterized protein" ... 141 1.3e-08 2
TIGR_CMR|CPS_2147 - symbol:CPS_2147 "UDP-glucose 4-epimer... 154 1.6e-08 1
TIGR_CMR|CBU_0677 - symbol:CBU_0677 "NAD dependent epimer... 154 1.6e-08 1
UNIPROTKB|G4MX57 - symbol:MGG_08012 "UDP-glucose 4-epimer... 121 2.0e-08 2
ASPGD|ASPL0000073187 - symbol:ugeA species:162425 "Emeric... 104 2.3e-08 3
TAIR|locus:2123466 - symbol:UGE5 "UDP-D-glucose/UDP-D-gal... 149 2.7e-08 2
TIGR_CMR|SO_3188 - symbol:SO_3188 "dTDP-glucose 4,6-dehyd... 134 3.7e-08 2
MGI|MGI:1921496 - symbol:Gale "galactose-4-epimerase, UDP... 138 3.8e-08 2
WB|WBGene00005019 - symbol:sqv-1 species:6239 "Caenorhabd... 153 4.0e-08 1
TAIR|locus:2010371 - symbol:UGE1 "UDP-D-glucose/UDP-D-gal... 145 5.0e-08 2
UNIPROTKB|I3LL84 - symbol:GALE "Uncharacterized protein" ... 137 5.1e-08 2
TAIR|locus:2015253 - symbol:UGE3 "UDP-D-glucose/UDP-D-gal... 142 5.6e-08 2
TAIR|locus:2163401 - symbol:DUR "DEFECTIVE UGE IN ROOT" s... 150 7.7e-08 1
UNIPROTKB|P55294 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 134 7.8e-08 2
WARNING: Descriptions of 41 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2030973 [details] [associations]
symbol:GER2 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0006857 "oligopeptide transport" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AC034106 GO:GO:0016853 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:PLN02725 GO:GO:0050577 GO:GO:0042351 EMBL:AY063880
EMBL:AY096364 IPI:IPI00526329 PIR:B86314 RefSeq:NP_564040.1
UniGene:At.15825 ProteinModelPortal:Q9LMU0 SMR:Q9LMU0 STRING:Q9LMU0
PaxDb:Q9LMU0 PRIDE:Q9LMU0 EnsemblPlants:AT1G17890.1 GeneID:838368
KEGG:ath:AT1G17890 GeneFarm:5163 TAIR:At1g17890 InParanoid:Q9LMU0
OMA:IHCAGRV PhylomeDB:Q9LMU0 Genevestigator:Q9LMU0
GermOnline:AT1G17890 Uniprot:Q9LMU0
Length = 328
Score = 1386 (493.0 bits), Expect = 9.9e-142, P = 9.9e-142
Identities = 262/319 (82%), Positives = 289/319 (90%)
Query: 4 SNKDSCSFLSEKSAKIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESF 63
S S SF+ EKSAKIFVAGHRGLVGSAIVRKL GFTNL+LRTH+ELDLT QSDVESF
Sbjct: 7 SEMKSGSFMLEKSAKIFVAGHRGLVGSAIVRKLQDQGFTNLVLRTHSELDLTSQSDVESF 66
Query: 64 FAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCI 123
FA EKP YVI+AAAKVGGIHANNTYPA+FI +NLQIQTNVI SA+ +GVKKLLFLGSSCI
Sbjct: 67 FATEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGVKKLLFLGSSCI 126
Query: 124 YPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPN 183
YPKFAPQPIPE+ALLTGPLEPTNEWYAIAKIAGIKMCQAY++Q++++AISGMPTNLYG N
Sbjct: 127 YPKFAPQPIPESALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAISGMPTNLYGQN 186
Query: 184 DNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDG 243
DNFHPENSHVLPALMRRFHEAK N A EVVVWG+GSPLREFLHVDDLADA VF+MD+Y G
Sbjct: 187 DNFHPENSHVLPALMRRFHEAKANNADEVVVWGSGSPLREFLHVDDLADACVFLMDQYSG 246
Query: 244 LEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWRAKI 303
EH+NVGSG EV+IKELAE VKE VGF+G+LVWD++KPDGTPRKLMDSSKLA LGW KI
Sbjct: 247 FEHVNVGSGVEVTIKELAELVKEVVGFKGKLVWDTTKPDGTPRKLMDSSKLASLGWTPKI 306
Query: 304 ELRDGLADTYKWYLENVKQ 322
L+DGL+ TY+WYLENV Q
Sbjct: 307 SLKDGLSQTYEWYLENVVQ 325
>TAIR|locus:2197264 [details] [associations]
symbol:GER1
""GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0006005 "L-fucose biosynthetic process"
evidence=IDA] [GO:0019853 "L-ascorbic acid biosynthetic process"
evidence=IMP] [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016853 EMBL:AC010556 EMBL:AK228837 EMBL:BT029480
EMBL:AF045286 EMBL:AB034806 IPI:IPI00540212 PIR:F96758
RefSeq:NP_177468.2 UniGene:At.1531 ProteinModelPortal:O49213
SMR:O49213 STRING:O49213 PaxDb:O49213 PRIDE:O49213
EnsemblPlants:AT1G73250.1 GeneID:843659 KEGG:ath:AT1G73250
GeneFarm:5162 TAIR:At1g73250 HOGENOM:HOG000168011 InParanoid:O49213
KO:K02377 OMA:DFISAMP ProtClustDB:PLN02725
BioCyc:ARA:AT1G73250-MONOMER BioCyc:MetaCyc:AT1G73250-MONOMER
Genevestigator:O49213 GermOnline:AT1G73250 GO:GO:0050577
GO:GO:0042351 GO:GO:0006005 Uniprot:O49213
Length = 323
Score = 1369 (487.0 bits), Expect = 6.3e-140, P = 6.3e-140
Identities = 257/320 (80%), Positives = 288/320 (90%)
Query: 1 MGDSNKDSCSFLSEKSAKIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDV 60
M ++ S +S+KSAKIFVAGHRGLVGSAIVRKL GFTNL+L+THAELDLTRQ+DV
Sbjct: 1 MAETIGSEVSSMSDKSAKIFVAGHRGLVGSAIVRKLQEQGFTNLVLKTHAELDLTRQADV 60
Query: 61 ESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGS 120
ESFF+ EKP YVI+AAAKVGGIHANNTYPA+FI +NLQIQTNVI SA+ +GVKKLLFLGS
Sbjct: 61 ESFFSQEKPVYVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYEHGVKKLLFLGS 120
Query: 121 SCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLY 180
SCIYPKFAPQPIPE+ALLT LEPTNEWYAIAKIAGIK CQAY+IQ+ ++AISGMPTNLY
Sbjct: 121 SCIYPKFAPQPIPESALLTASLEPTNEWYAIAKIAGIKTCQAYRIQHGWDAISGMPTNLY 180
Query: 181 GPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDE 240
GPNDNFHPENSHVLPALMRRFHEAKVNGA+EVVVWGTGSPLREFLHVDDLADA VF++D
Sbjct: 181 GPNDNFHPENSHVLPALMRRFHEAKVNGAEEVVVWGTGSPLREFLHVDDLADACVFLLDR 240
Query: 241 YDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWR 300
Y GLEH+N+GSG+EV+I+ELAE VKE VGFEG+L WD +KPDGTPRKLMDSSKLA LGW
Sbjct: 241 YSGLEHVNIGSGQEVTIRELAELVKEVVGFEGKLGWDCTKPDGTPRKLMDSSKLASLGWT 300
Query: 301 AKIELRDGLADTYKWYLENV 320
K+ LRDGL+ TY WYL+NV
Sbjct: 301 PKVSLRDGLSQTYDWYLKNV 320
>TIGR_CMR|GSU_0627 [details] [associations]
symbol:GSU_0627 "GDP-fucose synthetase" species:243231
"Geobacter sulfurreducens PCA" [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0044237 HOGENOM:HOG000168011
KO:K02377 OMA:IHCAGRV RefSeq:NP_951685.1 ProteinModelPortal:Q74FI1
SMR:Q74FI1 GeneID:2685221 KEGG:gsu:GSU0627 PATRIC:22024005
ProtClustDB:CLSK827960 BioCyc:GSUL243231:GH27-626-MONOMER
Uniprot:Q74FI1
Length = 314
Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
Identities = 201/304 (66%), Positives = 247/304 (81%)
Query: 14 EKSAKIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVI 73
+++A+I+VAGHRGLVGSAIVRKL + G+ NLLLRT ELDL Q+ V +FFAAE+P YV
Sbjct: 2 DRNARIYVAGHRGLVGSAIVRKLTAEGYGNLLLRTSGELDLRDQAAVAAFFAAEQPDYVF 61
Query: 74 VAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIP 133
+AAAKVGGI ANNTYPAEFI NL I+ NVI S++R GV KLLFLGS+CIYPK A QPI
Sbjct: 62 LAAAKVGGIVANNTYPAEFIYDNLMIEANVIHSSYRTGVSKLLFLGSTCIYPKMASQPIR 121
Query: 134 ENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHV 193
E LLTGPLEPTNE YAIAKIAGI +C++Y QY I+ MPTNLYGPNDNF E SHV
Sbjct: 122 EEYLLTGPLEPTNEAYAIAKIAGISLCRSYNRQYGTRFIAAMPTNLYGPNDNFDLEKSHV 181
Query: 194 LPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGK 253
LPAL+R+FHEAK+ GA V VWGTG+PLREF+HVDD+ADA +++M ++G + +N+GSG+
Sbjct: 182 LPALIRKFHEAKIAGAPTVTVWGTGAPLREFIHVDDVADAALYLMRHHEGNDIVNIGSGE 241
Query: 254 EVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWRAKIELRDGLADTY 313
E+SI++LA VK VGFEGELV+D+SKPDGTPRKL D S+L LGWR +I L DG+ +TY
Sbjct: 242 EISIRDLALLVKIVVGFEGELVFDASKPDGTPRKLSDVSRLHSLGWRHRIGLEDGVRETY 301
Query: 314 KWYL 317
+W++
Sbjct: 302 EWFV 305
>UNIPROTKB|P32055 [details] [associations]
symbol:fcl "Fcl" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0009242 "colanic acid biosynthetic
process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 UniPathway:UPA00980
InterPro:IPR016040 GO:GO:0005737 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0016853
GO:GO:0009103 HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577
GO:GO:0042351 EMBL:U38473 PIR:C64971 RefSeq:NP_416556.1
RefSeq:YP_490294.1 PDB:1BSV PDB:1BWS PDB:1E6U PDB:1E7Q PDB:1E7R
PDB:1E7S PDB:1FXS PDB:1GFS PDBsum:1BSV PDBsum:1BWS PDBsum:1E6U
PDBsum:1E7Q PDBsum:1E7R PDBsum:1E7S PDBsum:1FXS PDBsum:1GFS
ProteinModelPortal:P32055 SMR:P32055 IntAct:P32055
EnsemblBacteria:EBESCT00000000077 EnsemblBacteria:EBESCT00000014550
GeneID:12930697 GeneID:946563 KEGG:ecj:Y75_p2015 KEGG:eco:b2052
PATRIC:32119437 EchoBASE:EB1736 EcoGene:EG11788 OMA:ASVHVMN
ProtClustDB:CLSK880275 BioCyc:EcoCyc:FCL-MONOMER
BioCyc:ECOL316407:JW2037-MONOMER BioCyc:MetaCyc:FCL-MONOMER
EvolutionaryTrace:P32055 Genevestigator:P32055 GO:GO:0009242
Uniprot:P32055
Length = 321
Score = 908 (324.7 bits), Expect = 4.5e-91, P = 4.5e-91
Identities = 177/311 (56%), Positives = 231/311 (74%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAA 77
++F+AGHRG+VGSAI R+L G L+LRT EL+L V FFA+E+ V +AAA
Sbjct: 5 RVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAA 64
Query: 78 KVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIPENAL 137
KVGGI ANNTYPA+FI N+ I++N+I +A + V KLLFLGSSCIYPK A QP+ E+ L
Sbjct: 65 KVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESEL 124
Query: 138 LTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPAL 197
L G LEPTNE YAIAKIAGIK+C++Y QY + S MPTNLYGP+DNFHP NSHV+PAL
Sbjct: 125 LQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPAL 184
Query: 198 MRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMD---------EYDGLEHLN 248
+RRFHEA A +VVVWG+G+P+REFLHVDD+A A + +M+ L H+N
Sbjct: 185 LRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHIN 244
Query: 249 VGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWRAKIELRDG 308
VG+G + +I+ELA+ + + VG++G +V+D+SKPDGTPRKL+D ++L +LGW +I L G
Sbjct: 245 VGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQLGWYHEISLEAG 304
Query: 309 LADTYKWYLEN 319
LA TY+W+LEN
Sbjct: 305 LASTYQWFLEN 315
>TIGR_CMR|CBU_0688 [details] [associations]
symbol:CBU_0688 "GDP-fucose synthetase" species:227377
"Coxiella burnetii RSA 493" [GO:0009242 "colanic acid biosynthetic
process" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=ISS] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GenomeReviews:AE016828_GR
GO:GO:0044237 HOGENOM:HOG000168011 HSSP:P32055 EMBL:AF387640
ProteinModelPortal:Q93N55 PATRIC:17930059 ProtClustDB:CLSK914241
BioCyc:CBUR227377:GJ7S-686-MONOMER Uniprot:Q93N55
Length = 332
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 157/320 (49%), Positives = 214/320 (66%)
Query: 14 EKSAKIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVI 73
+K A IFV GHRGL GSAI+R+L G+++L+ RTH ELDLT + V FFA P YV
Sbjct: 2 QKDAPIFVTGHRGLAGSAILRRLKKQGYSSLITRTHQELDLTNKEKVFEFFANNCPEYVF 61
Query: 74 VAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIP 133
+AAA+VGGI+ +N +P +FI NL IQ NVI+++FRY VK+LLFLGSSCIY AP+P+
Sbjct: 62 LAAARVGGINDSNLHPVDFIRDNLAIQWNVIEASFRYKVKRLLFLGSSCIYSNDAPRPLK 121
Query: 134 ENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHV 193
E +G LEPTN Y+ AKIAGI+ C AY QYK + MPTNL+GPNDN+ EN HV
Sbjct: 122 EIYFNSGKLEPTNRAYSTAKIAGIEHCWAYNRQYKTQYLCAMPTNLFGPNDNYDLENGHV 181
Query: 194 LPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEH------- 246
+ +L+ + H+AK V+WG+G REFL+ DDLA+A +M+ D +
Sbjct: 182 VASLISKIHQAKEQKKPNFVLWGSGKAKREFLYSDDLAEACCHLMNLPDDIVKSVFGQDD 241
Query: 247 ----LNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWRAK 302
+N+GSGKE+SI ELA +++ +G++G+++WD SKPDG K+MD S + LGW A+
Sbjct: 242 QPPIVNIGSGKEISIYELALLIQDIIGYQGDIIWDHSKPDGALTKVMDVSLMQYLGWSAR 301
Query: 303 IELRDGLADTYKWYLENVKQ 322
L G+ TY++YL +Q
Sbjct: 302 EGLVSGIKKTYQYYLSYERQ 321
>TIGR_CMR|CJE_1612 [details] [associations]
symbol:CJE_1612 "GDP-L-fucose synthetase" species:195099
"Campylobacter jejuni RM1221" [GO:0009242 "colanic acid
biosynthetic process" evidence=ISS] [GO:0050577 "GDP-L-fucose
synthase activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577 OMA:IHCAGRV
GO:GO:0042350 RefSeq:YP_179593.1 ProteinModelPortal:Q5HSZ2
STRING:Q5HSZ2 GeneID:3232240 KEGG:cjr:CJE1612 PATRIC:20045021
BioCyc:CJEJ195099:GJC0-1642-MONOMER Uniprot:Q5HSZ2
Length = 349
Score = 531 (192.0 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 107/193 (55%), Positives = 142/193 (73%)
Query: 14 EKSAKIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVI 73
+K+ KI++AGHRGLVGSAI+RKL G+ NL+ +TH+ELDLT QS V+ FF EKP +V
Sbjct: 2 KKNDKIYIAGHRGLVGSAILRKLKDNGYENLIYKTHSELDLTDQSAVKFFFEKEKPDFVF 61
Query: 74 VAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIP 133
+ AAK+GG+ A+ + AEFI NLQIQ NVI ++ VKKLLF+ S+ +YP+ A PI
Sbjct: 62 LCAAKLGGMDAHRKFRAEFIYDNLQIQNNVIHQSYINNVKKLLFISSTSVYPEHASLPIK 121
Query: 134 ENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHV 193
E LL+G L+ +E YAIAKIAG+KMC+AY +Y N IS PT LYGPNDNF E+++V
Sbjct: 122 EECLLSGKLQYLHEPYAIAKIAGMKMCEAYSDRYGVNFISVCPTTLYGPNDNFDIESANV 181
Query: 194 LPALMRRFHEAKV 206
+ ALMR+ + AK+
Sbjct: 182 VSALMRKIYLAKL 194
Score = 240 (89.5 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 50/123 (40%), Positives = 75/123 (60%)
Query: 208 GAKE--VVVWGTGSPLREFLHVDDLADAVVFMM-----DEYDGLE----HLNVGSGKEVS 256
G KE + +WG+G+P REFL+ DDLA+A + +M + + ++ H+N+G K S
Sbjct: 223 GVKENSIEIWGSGNPKREFLYSDDLANACIHIMQNINIEHINKIDRDNPHINIGPEKNYS 282
Query: 257 IKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWRAKIELRDGLADTYKWY 316
IKELA +K + FEGE ++ SKPDGT KL K+ ++ W+A +L DG+ T+ WY
Sbjct: 283 IKELAYLLKTVIQFEGEFRYNLSKPDGTYEKLTCCDKIKQMNWQAYTKLEDGIRSTFHWY 342
Query: 317 LEN 319
N
Sbjct: 343 KSN 345
>UNIPROTKB|Q47WH1 [details] [associations]
symbol:CPS_4200 "NAD-dependent epimerase/dehydratase family
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 EMBL:CP000083
GenomeReviews:CP000083_GR HOGENOM:HOG000168011 KO:K02377
OMA:ASVHVMN RefSeq:YP_270851.1 ProteinModelPortal:Q47WH1
STRING:Q47WH1 GeneID:3522019 KEGG:cps:CPS_4200 PATRIC:21471263
ProtClustDB:CLSK2768411 BioCyc:CPSY167879:GI48-4210-MONOMER
Uniprot:Q47WH1
Length = 313
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 112/304 (36%), Positives = 180/304 (59%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAA 77
KI + G G+VG I+ +L S L + L+L + +++ KP +I AA
Sbjct: 2 KILLTGANGMVGKNIL-ELASKHQHTFLTPSSKVLNLLDAASTQAYLVEHKPDMIIHAAG 60
Query: 78 KVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIPENAL 137
VGGI AN +P +F+ N+Q+ N+++SA G+K+ L L SSC+YP+ A P+ E +
Sbjct: 61 VVGGIQANMAHPVKFLVDNMQMGLNILNSAKNCGIKQFLNLSSSCMYPRDALNPLSEELI 120
Query: 138 LTGPLEPTNEWYAIAKIAGIKMCQAY---QIQYKFNAISGMPTNLYGPNDNFHPENSHVL 194
L G LEPTNE YA+AKIA ++C+ + + + I +P NLYG +D F P NSH++
Sbjct: 121 LKGELEPTNEGYALAKIASTRLCEYISHEEPELLYKTI--IPCNLYGRHDKFSPHNSHMI 178
Query: 195 PALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGL-EHLNVGSGK 253
PA++R+ +AK E+ +WG G REF++ DLAD + + + + + ++LNVG G+
Sbjct: 179 PAVIRKVIDAKQKDLTEIDIWGDGKARREFMYAGDLADFIFYAIANFSRMPQNLNVGLGE 238
Query: 254 EVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWRAKIELRDGLADTY 313
+ +I + + + E +GF G D +KP G +KL+D +KL GW K +L +GL +T
Sbjct: 239 DFTINDYYQRIAEIIGFSGTFKHDLTKPVGMKQKLIDDNKLNAFGWSYKTDLTEGLKNTV 298
Query: 314 KWYL 317
+++L
Sbjct: 299 QFFL 302
>TIGR_CMR|CPS_4200 [details] [associations]
symbol:CPS_4200 "NAD-dependent epimerase/dehydratase
family protein" species:167879 "Colwellia psychrerythraea 34H"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:CP000083 GenomeReviews:CP000083_GR
HOGENOM:HOG000168011 KO:K02377 OMA:ASVHVMN RefSeq:YP_270851.1
ProteinModelPortal:Q47WH1 STRING:Q47WH1 GeneID:3522019
KEGG:cps:CPS_4200 PATRIC:21471263 ProtClustDB:CLSK2768411
BioCyc:CPSY167879:GI48-4210-MONOMER Uniprot:Q47WH1
Length = 313
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 112/304 (36%), Positives = 180/304 (59%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAA 77
KI + G G+VG I+ +L S L + L+L + +++ KP +I AA
Sbjct: 2 KILLTGANGMVGKNIL-ELASKHQHTFLTPSSKVLNLLDAASTQAYLVEHKPDMIIHAAG 60
Query: 78 KVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIPENAL 137
VGGI AN +P +F+ N+Q+ N+++SA G+K+ L L SSC+YP+ A P+ E +
Sbjct: 61 VVGGIQANMAHPVKFLVDNMQMGLNILNSAKNCGIKQFLNLSSSCMYPRDALNPLSEELI 120
Query: 138 LTGPLEPTNEWYAIAKIAGIKMCQAY---QIQYKFNAISGMPTNLYGPNDNFHPENSHVL 194
L G LEPTNE YA+AKIA ++C+ + + + I +P NLYG +D F P NSH++
Sbjct: 121 LKGELEPTNEGYALAKIASTRLCEYISHEEPELLYKTI--IPCNLYGRHDKFSPHNSHMI 178
Query: 195 PALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGL-EHLNVGSGK 253
PA++R+ +AK E+ +WG G REF++ DLAD + + + + + ++LNVG G+
Sbjct: 179 PAVIRKVIDAKQKDLTEIDIWGDGKARREFMYAGDLADFIFYAIANFSRMPQNLNVGLGE 238
Query: 254 EVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWRAKIELRDGLADTY 313
+ +I + + + E +GF G D +KP G +KL+D +KL GW K +L +GL +T
Sbjct: 239 DFTINDYYQRIAEIIGFSGTFKHDLTKPVGMKQKLIDDNKLNAFGWSYKTDLTEGLKNTV 298
Query: 314 KWYL 317
+++L
Sbjct: 299 QFFL 302
>RGD|1307028 [details] [associations]
symbol:Tsta3 "tissue specific transplantation antigen P35B"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA;ISO] [GO:0019835 "cytolysis" evidence=IEA;ISO]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISO] [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IEA;ISO] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 RGD:1307028
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:CH473950 KO:K02377 OMA:IHCAGRV
GeneTree:ENSGT00390000004681 CTD:7264 RefSeq:NP_001120927.1
RefSeq:NP_001257718.1 UniGene:Rn.6606 Ensembl:ENSRNOT00000012306
GeneID:300036 KEGG:rno:300036 NextBio:646179 Uniprot:G3V762
Length = 321
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 116/314 (36%), Positives = 176/314 (56%)
Query: 16 SAKIFVAGHRGLVGSAIVRKLLSLGF----TNLLLRTHAELDLTRQSDVESFFAAEKPSY 71
S +I V G GLVG AI +K+++ G + + + DLT + ++ F +P++
Sbjct: 7 SMRILVTGGSGLVGRAI-QKVVADGAGLPGEEWVFVSSKDADLTDAAQTQALFQKVQPTH 65
Query: 72 VIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQP 131
VI AA VGG+ N Y +F N+ I NV+ SAF G +K++ S+CI+P P
Sbjct: 66 VIHLAAMVGGLFRNIKYNLDFWRKNVHINDNVLHSAFEVGTRKVVSCLSTCIFPDKTTYP 125
Query: 132 IPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENS 191
I E + GP +N Y+ AK +AY Q+ S +PTN++GP DNF+ E+
Sbjct: 126 IDETMIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTSVIPTNVFGPYDNFNIEDG 185
Query: 192 HVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEH--LNV 249
HVLP L+ + H AK +G+ + VWGTG P R+F++ DLA ++++ EY+ +E L+V
Sbjct: 186 HVLPGLIHKVHLAKSSGSA-LTVWGTGKPRRQFIYSLDLARLFIWVLREYNEVEPIILSV 244
Query: 250 GSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKL-ARLGWRAKIELRDG 308
G EVSIKE AE V EA+ F GE+ +DS+K DG +K + KL + L +
Sbjct: 245 GEEDEVSIKEAAEAVVEAMDFSGEVTFDSTKSDGQYKKTASNGKLRSYLPDFCFTPFKQA 304
Query: 309 LADTYKWYLENVKQ 322
+ +T W+ EN +Q
Sbjct: 305 VKETCAWFTENYEQ 318
>UNIPROTKB|Q13630 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=TAS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=IEA;IDA;TAS]
[GO:0042356 "GDP-4-dehydro-D-rhamnose reductase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IC] [GO:0007159
"leukocyte cell-cell adhesion" evidence=NAS] [GO:0019673
"GDP-mannose metabolic process" evidence=IDA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005737
eggNOG:COG0451 DrugBank:DB00157 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0009055 GO:GO:0050662 GO:GO:0019835 GO:GO:0016853
EMBL:CH471162 GO:GO:0007159 GO:GO:0019673 HOGENOM:HOG000168011
KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV EMBL:U58766
EMBL:AK313560 EMBL:BC001941 EMBL:BC093061 IPI:IPI00014361
RefSeq:NP_003304.1 UniGene:Hs.404119 PDB:4B8W PDBsum:4B8W
ProteinModelPortal:Q13630 SMR:Q13630 IntAct:Q13630 STRING:Q13630
PhosphoSite:Q13630 DMDM:13124123 REPRODUCTION-2DPAGE:IPI00014361
PaxDb:Q13630 PeptideAtlas:Q13630 PRIDE:Q13630 DNASU:7264
Ensembl:ENST00000425753 Ensembl:ENST00000529064 GeneID:7264
KEGG:hsa:7264 UCSC:uc003yza.2 CTD:7264 GeneCards:GC08M144694
HGNC:HGNC:12390 HPA:HPA023361 MIM:137020 neXtProt:NX_Q13630
PharmGKB:PA37056 HOVERGEN:HBG000059 InParanoid:Q13630
OrthoDB:EOG4VT5XR PhylomeDB:Q13630 GenomeRNAi:7264 NextBio:28399
ArrayExpress:Q13630 Bgee:Q13630 CleanEx:HS_TSTA3
Genevestigator:Q13630 GermOnline:ENSG00000104522 GO:GO:0042356
Uniprot:Q13630
Length = 321
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 114/315 (36%), Positives = 179/315 (56%)
Query: 16 SAKIFVAGHRGLVGSAIVRKLLSLGF----TNLLLRTHAELDLTRQSDVESFFAAEKPSY 71
S +I V G GLVG AI +K+++ G + + + + DLT + + F +P++
Sbjct: 7 SMRILVTGGSGLVGKAI-QKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQPTH 65
Query: 72 VIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQP 131
VI AA VGG+ N Y +F N+ + NV+ SAF G +K++ S+CI+P P
Sbjct: 66 VIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYP 125
Query: 132 IPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENS 191
I E + GP +N Y+ AK +AY QY + +PTN++GP+DNF+ E+
Sbjct: 126 IDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDG 185
Query: 192 HVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEH--LNV 249
HVLP L+ + H AK +G+ + VWGTG+P R+F++ DLA ++++ EY+ +E L+V
Sbjct: 186 HVLPGLIHKVHLAKSSGSA-LTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPIILSV 244
Query: 250 GSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARL--GWRAKIELRD 307
G EVSIKE AE V EA+ F GE+ +D++K DG +K +SKL +R +
Sbjct: 245 GEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKLRTYLPDFRFT-PFKQ 303
Query: 308 GLADTYKWYLENVKQ 322
+ +T W+ +N +Q
Sbjct: 304 AVKETCAWFTDNYEQ 318
>UNIPROTKB|Q2KIT8 [details] [associations]
symbol:TSTA3 "Tissue specific transplantation antigen P35B"
species:9913 "Bos taurus" [GO:0050577 "GDP-L-fucose synthase
activity" evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0019835 GO:GO:0019673 HOGENOM:HOG000168011
KO:K02377 GO:GO:0050577 OMA:IHCAGRV GeneTree:ENSGT00390000004681
CTD:7264 HOVERGEN:HBG000059 OrthoDB:EOG4VT5XR GO:GO:0042350
EMBL:DAAA02037463 EMBL:BC112514 IPI:IPI00728290
RefSeq:NP_001039604.1 UniGene:Bt.64492 STRING:Q2KIT8
Ensembl:ENSBTAT00000049133 GeneID:513158 KEGG:bta:513158
InParanoid:Q2KIT8 NextBio:20870730 Uniprot:Q2KIT8
Length = 321
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 113/312 (36%), Positives = 175/312 (56%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFT----NLLLRTHAELDLTRQSDVESFFAAEKPSYVI 73
+I V G GLVG AI +K++ G + + + + DLT + + F +P++VI
Sbjct: 9 RILVTGGSGLVGRAI-QKVVEDGARLPGEDWVFVSSKDADLTDAAQTRALFQQVQPTHVI 67
Query: 74 VAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIP 133
AA VGG+ N Y +F N+ I NV+ SAF GV+K++ S+CI+P PI
Sbjct: 68 HLAAMVGGLFRNIKYNLDFWRKNIHINDNVLHSAFEVGVRKVVSCLSTCIFPDKTTYPID 127
Query: 134 ENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHV 193
E + GP +N Y+ AK +AY Q+ + +PTN++GP+DNF E+ HV
Sbjct: 128 ETMIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTNVFGPHDNFSIEDGHV 187
Query: 194 LPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEH--LNVGS 251
LP L+ + H AK +G+ + VWGTG P R+F++ DLA ++ + EYD +E L+VG
Sbjct: 188 LPGLIHKVHLAKSSGSA-LTVWGTGRPRRQFIYSLDLARLFIWALREYDEVEPIILSVGE 246
Query: 252 GKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKL-ARLGWRAKIELRDGLA 310
EVS++E AE V EA+ F GE+ +D++K DG +K ++KL A L + +
Sbjct: 247 EDEVSVQEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNAKLRAYLPDFRFTPFKQAVK 306
Query: 311 DTYKWYLENVKQ 322
+T W+ +N +Q
Sbjct: 307 ETCAWFTDNYEQ 318
>UNIPROTKB|E2RM30 [details] [associations]
symbol:TSTA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA] [GO:0019673
"GDP-mannose metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835
GO:GO:0019673 KO:K02377 GO:GO:0050577 OMA:IHCAGRV
GeneTree:ENSGT00390000004681 CTD:7264 GO:GO:0042350
EMBL:AAEX03008935 RefSeq:XP_532346.2 ProteinModelPortal:E2RM30
Ensembl:ENSCAFT00000002068 GeneID:475116 KEGG:cfa:475116
NextBio:20851008 Uniprot:E2RM30
Length = 321
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 113/315 (35%), Positives = 177/315 (56%)
Query: 16 SAKIFVAGHRGLVGSAIVRKLLSLGF----TNLLLRTHAELDLTRQSDVESFFAAEKPSY 71
S +I V G GLVG AI +K+++ G + + + + DLT + + F +P++
Sbjct: 7 SVRILVTGGSGLVGRAI-QKVVADGAGLPGEDWVFVSSKDADLTDAAQTRALFEKVRPTH 65
Query: 72 VIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQP 131
VI AA VGG+ N Y +F N+ I NV+ SAF GV+K++ S+CI+P P
Sbjct: 66 VIHLAAMVGGLFRNIKYNLDFWRKNVHINDNVLHSAFEVGVRKVVSCLSTCIFPDKTTYP 125
Query: 132 IPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENS 191
I E + GP +N Y+ AK +AY Q+ + +PTN++GP+DNF+ E+
Sbjct: 126 IDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTNVFGPHDNFNIEDG 185
Query: 192 HVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEH--LNV 249
HVLP L+ + H AK +G+ + VWGTG P R+F++ DLA ++++ EY+ +E L+V
Sbjct: 186 HVLPGLIHKVHLAKSSGSA-LTVWGTGKPRRQFIYSLDLARLFIWVLREYNEVEPIILSV 244
Query: 250 GSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARL--GWRAKIELRD 307
G EVSI+E AE V EA+ F GE+ +D++K DG +K + KL +R +
Sbjct: 245 GEEDEVSIQEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNGKLRTYLPDFRFT-PFKQ 303
Query: 308 GLADTYKWYLENVKQ 322
+ +T W+ N +Q
Sbjct: 304 AVKETCAWFTHNYEQ 318
>DICTYBASE|DDB_G0270184 [details] [associations]
symbol:ger "GDP-keto-6-deoxymannose 3,5-
epimerase/4-reductase" species:44689 "Dictyostelium discoideum"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0270184
EMBL:AAFI02000005 GenomeReviews:CM000150_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
RefSeq:XP_646604.1 HSSP:P32055 ProteinModelPortal:Q55C77
STRING:Q55C77 EnsemblProtists:DDB0305155 GeneID:8617576
KEGG:ddi:DDB_G0270184 InParanoid:Q55C77 ProtClustDB:CLSZ2431446
Uniprot:Q55C77
Length = 320
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 104/316 (32%), Positives = 178/316 (56%)
Query: 12 LSEKSAK--IFVAGHRGLVGSAIVRKLLSLGFTN---LLLRTHAELDLTRQSDVESFFAA 66
++E ++K + V G GLVG I + + +N + +R+ ++ DL + S+F
Sbjct: 1 MTETTSKRTVLVTGGSGLVGKGIEKYVKETDKSNDVWVFMRS-SDCDLKSRESTRSYFEK 59
Query: 67 EKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPK 126
KP++VI AA+VGG+ +N Y EF N+ I NV+ + V K + S+CI+P
Sbjct: 60 IKPTHVIHLAARVGGLFSNMKYKVEFFRENIDINDNVLACCKEFNVVKCVSCLSTCIFPD 119
Query: 127 FAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNF 186
PI E + GP P+NE YA AK + +AY +Y S +PTN+YGP+DN+
Sbjct: 120 KTTYPIDETMIHNGPPHPSNEGYAYAKRMIDVLNRAYNEEYGCKFTSVIPTNIYGPHDNY 179
Query: 187 HPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEH 246
H + HV+P L+ + + A N +++ + GTG PLR+F++ DLA V+ ++ Y+ +
Sbjct: 180 HLTDGHVIPGLIHKTYLAMKNN-QDLTIMGTGKPLRQFIYSYDLAKYFVWTLNNYEEMSP 238
Query: 247 L--NVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWRAKIE 304
L +VG E+SI ++A + EA+ F+G+L++D+SK DG +K + KL L
Sbjct: 239 LILSVGEEDEISIADVARLITEAMEFKGKLIFDTSKADGQYKKTASNLKLKSLVPDLTFT 298
Query: 305 -LRDGLADTYKWYLEN 319
++ + ++ +W+++N
Sbjct: 299 PIQQAIKESCQWFIDN 314
>MGI|MGI:98857 [details] [associations]
symbol:Tsta3 "tissue specific transplantation antigen P35B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016853 "isomerase
activity" evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=ISO] [GO:0019835 "cytolysis" evidence=IMP] [GO:0042351
"'de novo' GDP-L-fucose biosynthetic process" evidence=ISO]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 MGI:MGI:98857 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835
GO:GO:0016853 GO:GO:0019673 HOGENOM:HOG000168011 KO:K02377
GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV CTD:7264 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:X53620 EMBL:X53621 EMBL:X53622 EMBL:X53623
EMBL:X53624 EMBL:X53625 EMBL:X53626 EMBL:X53627 EMBL:X53628
EMBL:M30127 EMBL:M30128 EMBL:AK029632 IPI:IPI00133690 PIR:S12516
RefSeq:NP_112478.1 UniGene:Mm.22596 ProteinModelPortal:P23591
SMR:P23591 STRING:P23591 PhosphoSite:P23591 PaxDb:P23591
PRIDE:P23591 Ensembl:ENSMUST00000023231 GeneID:22122 KEGG:mmu:22122
InParanoid:P23591 NextBio:301985 Bgee:P23591 CleanEx:MM_TSTA3
Genevestigator:P23591 GermOnline:ENSMUSG00000022570 Uniprot:P23591
Length = 321
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 113/314 (35%), Positives = 174/314 (55%)
Query: 16 SAKIFVAGHRGLVGSAIVRKLLSLGF----TNLLLRTHAELDLTRQSDVESFFAAEKPSY 71
S +I V G GLVG AI +K+++ G + + + DLT + ++ F +P++
Sbjct: 7 SMRILVTGGSGLVGRAI-QKVVADGAGLPGEEWVFVSSKDADLTDAAQTQALFQKVQPTH 65
Query: 72 VIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQP 131
VI AA VGG+ N Y +F N+ I NV+ SAF G +K++ S+CI+P P
Sbjct: 66 VIHLAAMVGGLFRNIKYNLDFWRKNVHINDNVLHSAFEVGARKVVSCLSTCIFPDKTTYP 125
Query: 132 IPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENS 191
I E + GP +N Y+ AK +AY Q+ + +PTN++GP DNF+ E+
Sbjct: 126 IDETMIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTNVFGPYDNFNIEDG 185
Query: 192 HVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEH--LNV 249
HVLP L+ + H AK + + + VWGTG P R+F++ DLA ++++ EY +E L+V
Sbjct: 186 HVLPGLIHKVHLAKSSDSA-LTVWGTGKPRRQFIYSLDLARLFIWVLREYSEVEPIILSV 244
Query: 250 GSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKL-ARLGWRAKIELRDG 308
G EVSIKE AE V EA+ F GE+ +DS+K DG +K + KL + L +
Sbjct: 245 GEEDEVSIKEAAEAVVEAMDFNGEVTFDSTKSDGQYKKTASNGKLRSYLPDFRFTPFKQA 304
Query: 309 LADTYKWYLENVKQ 322
+ +T W+ +N +Q
Sbjct: 305 VKETCTWFTDNYEQ 318
>FB|FBgn0034794 [details] [associations]
symbol:Gmer "GDP-4-keto-6-deoxy-D-mannose
3,5-epimerase/4-reductase" species:7227 "Drosophila melanogaster"
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0042356 "GDP-4-dehydro-D-rhamnose reductase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0033227
"dsRNA transport" evidence=IMP] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:AE013599 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
GO:GO:0033227 KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
EMBL:AM231688 EMBL:AY060873 EMBL:AY119148 RefSeq:NP_611734.1
UniGene:Dm.739 ProteinModelPortal:Q9W1X8 SMR:Q9W1X8 STRING:Q9W1X8
PaxDb:Q9W1X8 PRIDE:Q9W1X8 EnsemblMetazoa:FBtr0071905 GeneID:37638
KEGG:dme:Dmel_CG3495 CTD:37638 FlyBase:FBgn0034794
GeneTree:ENSGT00390000004681 InParanoid:Q9W1X8 OrthoDB:EOG4XWDDK
PhylomeDB:Q9W1X8 GenomeRNAi:37638 NextBio:804682 Bgee:Q9W1X8
GermOnline:CG3495 Uniprot:Q9W1X8
Length = 321
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 111/316 (35%), Positives = 170/316 (53%)
Query: 18 KIFVAGHRGLVGSAI--VRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVA 75
K+ V G GLVG A+ V K S + DLT + ++ FA EKP++VI
Sbjct: 3 KVLVTGGTGLVGKALEAVIKEQSPEDEQWFFAGSKDADLTNLAATQALFAREKPTHVIHL 62
Query: 76 AAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIPEN 135
AA VGG+ N +F+ NL I NV+ +A G K++ S+CI+P PI E
Sbjct: 63 AAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFPDKTSYPIDET 122
Query: 136 ALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLP 195
+ GP P+N Y+ AK AY +Y S +P N++GP+DN++PE SHV+P
Sbjct: 123 MVHNGPPHPSNYGYSYAKRLIDVQNHAYHDKYGRVYTSVIPCNIFGPHDNYNPEVSHVIP 182
Query: 196 ALMRRFHEA---KVN---GAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEH--L 247
++ R H+ K + K V+G+G PLR+F++ DLA+ +++++ Y+ +E L
Sbjct: 183 GMIYRMHQLVTEKTDVPENDKVFTVFGSGMPLRQFVYSRDLAELMIWVLRNYESVEPIIL 242
Query: 248 NVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLAR-LGWRAKIELR 306
+ +EV+I E+A+ V +A F G LV D+SK DG +K ++KL L A +L
Sbjct: 243 SADEVQEVTIFEVAQAVAKAFNFNGRLVCDTSKSDGQYKKTASNAKLRSFLPDYAFTDLE 302
Query: 307 DGLADTYKWYLENVKQ 322
+ + KWY+EN Q
Sbjct: 303 TAINASVKWYIENYDQ 318
>ZFIN|ZDB-GENE-050417-317 [details] [associations]
symbol:zgc:110348 "zgc:110348" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 ZFIN:ZDB-GENE-050417-317
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168011 GeneTree:ENSGT00390000004681
HOVERGEN:HBG000059 OMA:KNTHINI EMBL:BX663521 IPI:IPI00851573
Ensembl:ENSDART00000100262 Uniprot:B0S7C9
Length = 354
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 107/324 (33%), Positives = 179/324 (55%)
Query: 2 GDSNKDSCSFLSEKSAKIFVAGHRGLVGSAIVR--KLLSLGFTNLLLRTHAELDLTRQSD 59
G+ +++ + E ++ V G GLVG AI R K G + E +L +
Sbjct: 28 GEQSREKMNGTVEPM-RVLVTGGSGLVGRAIERVVKEEGRGGEEWTFLSSKEANLLSAKE 86
Query: 60 VESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLG 119
+ F +P++VI AA VGG+ N +F N+ I NV+ +A +GV K++
Sbjct: 87 TRAIFEKYRPTHVIHLAAMVGGLFRNMRQNLDFWRNNVFINDNVLQTANEFGVVKVVSCL 146
Query: 120 SSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAK-IAGIKMCQAYQIQYKFNAISGMPTN 178
S+CI+P PI E + GP +N YA AK + ++ ++ QY +G+ TN
Sbjct: 147 STCIFPDKTTYPIDETMIHNGPPHDSNFGYAFAKRMIDVQNRTCFK-QYGRRYTAGILTN 205
Query: 179 LYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMM 238
++G +DNF+ E+ HVLP L+ + + AK G K + VWG+G PLR+F++ DLA ++++
Sbjct: 206 VFGAHDNFNIEDGHVLPGLIHKTYLAKKEG-KPLQVWGSGKPLRQFIYSLDLARLFLWVL 264
Query: 239 DEYDGLEH--LNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLAR 296
EYD ++ L+VG E+SIK+ A+ V +A+GF G++++D+SK DG +K ++KL +
Sbjct: 265 REYDEVDPIILSVGEEDELSIKDCADAVVDALGFNGDVIYDTSKADGQFKKTASNAKLRQ 324
Query: 297 -LGWRAKIELRDGLADTYKWYLEN 319
L R+ + +T W++ N
Sbjct: 325 YLPDFQFTPFREAIKETCDWFVAN 348
>ZFIN|ZDB-GENE-071004-107 [details] [associations]
symbol:zgc:173683 "zgc:173683" species:7955 "Danio
rerio" [GO:0044237 "cellular metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-071004-107 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:BC153420 IPI:IPI00997417
RefSeq:NP_001103317.1 UniGene:Dr.92565 ProteinModelPortal:A8E513
GeneID:100126119 KEGG:dre:100126119 NextBio:20788981 Uniprot:A8E513
Length = 320
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 104/308 (33%), Positives = 172/308 (55%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFTN--LLLRTHAELDLTRQSDVESFFAAEKPSYVIVA 75
++ V G GLVG AI R + G + E +L + + F +P++VI
Sbjct: 9 RVLVTGGSGLVGRAIERVVKEEGREGEEWTFLSSKEANLLSAKETRAIFEKYRPTHVIHL 68
Query: 76 AAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIPEN 135
AA VGG+ N +F N+ I NV+ +A +GV K++ S+CI+P PI E
Sbjct: 69 AAMVGGLFRNMRQNLDFWRNNVFINDNVLQTANEFGVVKVVSCLSTCIFPDKTTYPIDET 128
Query: 136 ALLTGPLEPTNEWYAIAK-IAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVL 194
+ GP +N YA AK + ++ ++ QY + +PTN++G +DNF+ E+ HVL
Sbjct: 129 MIHNGPPHDSNFGYAFAKRMIDVQNRTCFK-QYGRRYTAVIPTNVFGAHDNFNIEDGHVL 187
Query: 195 PALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEH--LNVGSG 252
P L+ + + AK G K + VWG+G PLR+F++ DLA ++++ EYD ++ L+VG
Sbjct: 188 PGLIHKTYLAKKEG-KPLQVWGSGKPLRQFIYSLDLARLFLWVLREYDEVDPIILSVGEE 246
Query: 253 KEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLAR-LGWRAKIELRDGLAD 311
E+SIK+ A+ V +A+GF G++++D+SK DG +K ++KL + L R+ + +
Sbjct: 247 DELSIKDCADAVVDALGFNGDVIYDTSKADGQFKKTASNAKLRQYLPDFQFTPFREAIKE 306
Query: 312 TYKWYLEN 319
T W++ N
Sbjct: 307 TCDWFVAN 314
>ZFIN|ZDB-GENE-061013-348 [details] [associations]
symbol:zgc:153776 "zgc:153776" species:7955 "Danio
rerio" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-061013-348 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOVERGEN:HBG000059
UniGene:Dr.92565 EMBL:BC124732 IPI:IPI00805523
RefSeq:NP_001070752.1 ProteinModelPortal:Q08BG6 PRIDE:Q08BG6
GeneID:768139 KEGG:dre:768139 InParanoid:Q08BG6 NextBio:20918459
Bgee:Q08BG6 Uniprot:Q08BG6
Length = 320
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 103/308 (33%), Positives = 173/308 (56%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFTN--LLLRTHAELDLTRQSDVESFFAAEKPSYVIVA 75
++ V G GLVG AI R + G + + +L + + F +P++VI
Sbjct: 9 RVLVTGGSGLVGRAIERVVKDEGREGEEWTFLSSKDANLLSAEETRAIFQKYRPTHVIHL 68
Query: 76 AAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIPEN 135
AA VGG+ N +F N+ I NV+ +A +GV K++ S+CI+P PI E
Sbjct: 69 AAMVGGLFRNMRQNLDFWRNNVFINDNVLQTANEFGVVKVVSCLSTCIFPDKTTYPIDET 128
Query: 136 ALLTGPLEPTNEWYAIAK-IAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVL 194
+ GP +N YA AK + ++ ++ QY S +PTN++G +DNF+ ++ HVL
Sbjct: 129 MIHNGPPHDSNFGYAFAKRMIDVQNRTCFK-QYGRRYTSVIPTNVFGAHDNFNIDDGHVL 187
Query: 195 PALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEH--LNVGSG 252
P L+ + + AK G K + VWG+G PLR+F++ DLA ++++ EYD ++ L+VG
Sbjct: 188 PGLIHKTYLAKKEG-KPLQVWGSGKPLRQFIYSLDLARLFLWVLREYDEVDPIILSVGEE 246
Query: 253 KEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLAR-LGWRAKIELRDGLAD 311
E+SIK+ A+ V +A+GF+G++++D+SK DG +K ++KL + L R+ + +
Sbjct: 247 DELSIKDCADAVVDALGFKGDVIYDTSKADGQFKKTASNAKLRQYLPDFQFTPFREAIKE 306
Query: 312 TYKWYLEN 319
T W++ N
Sbjct: 307 TCDWFVAN 314
>ZFIN|ZDB-GENE-040722-1 [details] [associations]
symbol:tsta3 "tissue specific transplantation antigen
P35B" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-040722-1 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168011
KO:K02377 GeneTree:ENSGT00390000004681 CTD:7264 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:AL929003 OMA:IRETCEW EMBL:BC086741
IPI:IPI00509474 RefSeq:NP_001008620.1 UniGene:Dr.83537
STRING:Q5SPD5 Ensembl:ENSDART00000057980 GeneID:494077
KEGG:dre:494077 InParanoid:Q5SPD5 NextBio:20865585 Uniprot:Q5SPD5
Length = 318
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 106/309 (34%), Positives = 172/309 (55%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGF----TNLLLRTHAELDLTRQSDVESFFAAEKPSYVI 73
++ V G GLVG AI R ++ G + + + +L + ++ F +P++VI
Sbjct: 6 RVLVTGGSGLVGRAIER-VVKEGEGREGEEWIFLSSKDANLLSPEETKAVFEKHRPTHVI 64
Query: 74 VAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIP 133
AA VGG+ N +F N+ I NV+ +A GV K++ S+CI+P PI
Sbjct: 65 HLAAMVGGLFRNMRQNLDFWRSNVFINDNVLQAAHDSGVVKVVSCLSTCIFPDKTTYPID 124
Query: 134 ENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHV 193
E + GP +N YA AK +A+ Q+ + +PTN++G +DNF+ E+ HV
Sbjct: 125 ETMIHNGPPHESNFGYAYAKRMIDVQNRAFFQQFNRRYTAVIPTNVFGCHDNFNIEDGHV 184
Query: 194 LPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEH--LNVGS 251
LP L+ + + AK G K +VVWG+G PLR+F++ DLA V+++ EYD +E L+VG
Sbjct: 185 LPGLIHKTYIAKKEG-KPLVVWGSGRPLRQFIYSLDLARLFVWVLREYDEVEPIILSVGE 243
Query: 252 GKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWRAKIE-LRDGLA 310
E+SIK+ A+ V EA+ F G++++D+SK DG +K ++KL + K R+ +
Sbjct: 244 EDELSIKDAADAVVEALEFTGDVIYDTSKADGQFKKTASNAKLRKYLPDFKFTPFREAIK 303
Query: 311 DTYKWYLEN 319
+T W++ N
Sbjct: 304 ETCDWFVAN 312
>UNIPROTKB|E9PKL9 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019835 "cytolysis" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0044237
EMBL:AC067930 HGNC:HGNC:12390 IPI:IPI00981359
ProteinModelPortal:E9PKL9 SMR:E9PKL9 Ensembl:ENST00000529048
ArrayExpress:E9PKL9 Bgee:E9PKL9 Uniprot:E9PKL9
Length = 268
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 101/264 (38%), Positives = 153/264 (57%)
Query: 16 SAKIFVAGHRGLVGSAIVRKLLSLGF----TNLLLRTHAELDLTRQSDVESFFAAEKPSY 71
S +I V G GLVG AI +K+++ G + + + + DLT + + F +P++
Sbjct: 7 SMRILVTGGSGLVGKAI-QKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQPTH 65
Query: 72 VIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQP 131
VI AA VGG+ N Y +F N+ + NV+ SAF G +K++ S+CI+P P
Sbjct: 66 VIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYP 125
Query: 132 IPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENS 191
I E + GP +N Y+ AK +AY QY + +PTN++GP+DNF+ E+
Sbjct: 126 IDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDG 185
Query: 192 HVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEH--LNV 249
HVLP L+ + H AK +G+ + VWGTG+P R+F++ DLA ++++ EY+ +E L+V
Sbjct: 186 HVLPGLIHKVHLAKSSGSA-LTVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPIILSV 244
Query: 250 GSGKEVSIKELAEWVKEAVGFEGE 273
G EVSIKE AE V EA+ F GE
Sbjct: 245 GEEDEVSIKEAAEAVVEAMDFHGE 268
>UNIPROTKB|F1NYB5 [details] [associations]
symbol:TSTA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0019673 "GDP-mannose metabolic
process" evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0019673
GO:GO:0050577 GeneTree:ENSGT00390000004681 OMA:ASVHVMN
GO:GO:0042350 EMBL:AADN02037342 IPI:IPI00585390
Ensembl:ENSGALT00000025982 Uniprot:F1NYB5
Length = 260
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 97/257 (37%), Positives = 150/257 (58%)
Query: 68 KPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKF 127
KP++VI AA VGG+ N +F N+ I NV+ SA+ GV+K++ S+CI+P
Sbjct: 1 KPTHVIHLAAMVGGLFKNIRCNLDFWRRNIHINDNVLHSAYECGVQKVVSCLSTCIFPDK 60
Query: 128 APQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQY--KFNAISGMPTNLYGPNDN 185
PI E + GP +N Y+ AK + Y Q+ +F A+ +PTN++GP+DN
Sbjct: 61 TTYPIDETMIHNGPPHSSNFGYSYAKRMIDVQNRGYFEQHGCRFTAV--IPTNVFGPHDN 118
Query: 186 FHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLE 245
F+ E+ HVLP L+ + + AK NG+ + VWGTG P R+F++ DLA V+++ EY+ +E
Sbjct: 119 FNIEDGHVLPGLIHKVYLAKQNGSA-LTVWGTGKPRRQFIYSLDLARLFVWVLREYEEVE 177
Query: 246 H--LNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWRAKI 303
L+VG EVSI+E AE + EA+ F GEL++D++K DG +K ++KL +
Sbjct: 178 PIILSVGEEDEVSIREAAEAIVEAMDFRGELIFDTTKADGQFKKTASNAKLRHYLPNFQF 237
Query: 304 E-LRDGLADTYKWYLEN 319
R + +T W+ N
Sbjct: 238 TPFRQAVKETCTWFSTN 254
>WB|WBGene00019813 [details] [associations]
symbol:ger-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose
reductase activity" evidence=IEA] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IEA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 KO:K02377 GO:GO:0050577 OMA:IHCAGRV HSSP:P32055
GeneTree:ENSGT00390000004681 EMBL:FO081121 EMBL:AM231686 PIR:T16645
RefSeq:NP_498540.1 UniGene:Cel.10235 ProteinModelPortal:G5EER4
SMR:G5EER4 EnsemblMetazoa:R01H2.5 GeneID:187512
KEGG:cel:CELE_R01H2.5 CTD:187512 WormBase:R01H2.5 NextBio:935530
Uniprot:G5EER4
Length = 315
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 94/308 (30%), Positives = 164/308 (53%)
Query: 19 IFVAGHRGLVGSAIVRKLLSL----GFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIV 74
I V G GLVGSAI +K++ + + DL + F + KP++VI
Sbjct: 4 ILVTGGTGLVGSAI-KKVVETTEKRDDEKWVFIGSKDCDLENLEETRELFESVKPTHVIH 62
Query: 75 AAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIPE 134
AA VGG+ N + +F N+ I NV+ + V K + S+CI+P PI E
Sbjct: 63 LAAMVGGLFHNLAHNLQFFRKNMAINDNVLALCHEFDVIKCVSCLSTCIFPDKTSYPIDE 122
Query: 135 NALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVL 194
+ GP +N Y+ AK + + Y ++ S +P N++GP+DN++ ++ HVL
Sbjct: 123 TMVHLGPPHDSNFGYSYAKRMIDVLNKGYAQEHGRKYTSVVPCNVFGPHDNYNLQSGHVL 182
Query: 195 PALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEH--LNVGSG 252
PAL+ + + A+ +G + V+G+G+PLR+F++ DLA + ++ EY+ +E L+V
Sbjct: 183 PALIHKAYVAQRDGTP-LQVYGSGTPLRQFIYSIDLARLFIRVVREYEDVEPIILSVNES 241
Query: 253 KEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWRAKIE-LRDGLAD 311
EVSI++ V +A+ F G++ +D+SK DG +K + KL +L + + +
Sbjct: 242 DEVSIRDAVSAVVKAIDFTGDVEYDTSKADGQFKKTASNEKLLKLFPDFQFTPFEQAIQE 301
Query: 312 TYKWYLEN 319
+ +W+++N
Sbjct: 302 SVQWFVDN 309
>UNIPROTKB|I3LGP6 [details] [associations]
symbol:TSTA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
[GO:0019835 "cytolysis" evidence=IEA] [GO:0019673 "GDP-mannose
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0019673
GO:GO:0050577 GeneTree:ENSGT00390000004681 GO:GO:0042350
Ensembl:ENSSSCT00000029895 OMA:KNTHINI Uniprot:I3LGP6
Length = 318
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 100/320 (31%), Positives = 170/320 (53%)
Query: 14 EKSAKIFVAGHRGLVGSAIVRKLLSLGFT----NLLLRTHAELDLTRQSDVESFFAAEKP 69
++S +I V G GLVG AI +K+++ G + + + + DLT + + F +P
Sbjct: 7 QRSTRILVTGGSGLVGRAI-QKVVADGARLPGEDWVFVSSKDADLTNAAQTRALFEKVQP 65
Query: 70 SYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAP 129
++VI AA VGG+ N Y +F N+ I +V+ SAF G +K++ S+CI+P
Sbjct: 66 THVIHLAAMVGGLFRNMKYNLDFWRKNVHINDSVLHSAFEVGARKVVSCLSTCIFPDKTT 125
Query: 130 QPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPE 189
PI E+ + + A A +G + A+Q Q P L+GP+DNF+ E
Sbjct: 126 YPIDES--MVREIGRAXRGRARAACSG-RPGPAFQTQ-------APPGRLFGPHDNFNIE 175
Query: 190 NSHVLPALMRRFHEAKV---NG-AKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLE 245
+ HVLP L+ + H A + G ++VWGTG P R+F++ DLA ++++ EYD +E
Sbjct: 176 DGHVLPGLIHKVHLAALPLPTGRGSALMVWGTGRPRRQFIYSLDLARLFLWVLREYDQVE 235
Query: 246 HLNVGSGK--EVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWRAKI 303
+ + G SI+E AE V EA+ F GE+++D++K DG +K + ++ R ++
Sbjct: 236 PIILSGGTLGPXSIREAAEAVVEAMDFHGEVIFDTTKSDGQFKKTAXPWESSQPLPRPQL 295
Query: 304 ELRDG-LADTYKWYLENVKQ 322
+ +T W+ +N ++
Sbjct: 296 PPASAAVKETCAWFTDNYEE 315
>GENEDB_PFALCIPARUM|PF10_0137 [details] [associations]
symbol:PF10_0137 "GDP-fucose synthase,
putative" species:5833 "Plasmodium falciparum" [GO:0016491
"oxidoreductase activity" evidence=ISS] [GO:0016857 "racemase and
epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=ISS]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0016491 GO:GO:0006486
EMBL:AE014185 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:CLSZ2431446 GO:GO:0016857 RefSeq:XP_001347422.1
ProteinModelPortal:Q8IJQ5 GeneID:810295 KEGG:pfa:PF10_0137
EuPathDB:PlasmoDB:PF3D7_1014000 OMA:IRETCEW Uniprot:Q8IJQ5
Length = 329
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 74/239 (30%), Positives = 136/239 (56%)
Query: 72 VIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQP 131
+I AA VGG++AN +F+ NL+I NVI +Y + + +F S+CI+P P
Sbjct: 78 IIHFAAHVGGLYANKNNNLDFLINNLEISMNVIKLCHKYSISRGIFTLSTCIFPVNCSLP 137
Query: 132 IPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENS 191
+ E + G +NE Y+++K + + Y+ +Y + I +PTN+YG DNF+ EN+
Sbjct: 138 LTEEKIHDGKCHQSNEGYSVSKRVLEVLVRFYREKYNYEWICIIPTNIYGKYDNFNLENA 197
Query: 192 HVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEY---------D 242
HV+P+++ + + AKVN V + G GS +R+F++ D+ + ++++ Y D
Sbjct: 198 HVIPSIIHKMYLAKVNNTN-VYLLGDGSAVRQFIYNIDVNKILYYILNHYYSKNLTIIKD 256
Query: 243 GLEHL----NVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARL 297
+ ++ N+ S E+SIKELA+ +K + F ++++D++K +G +K + L +L
Sbjct: 257 NIYNIIFSTNLPSN-ELSIKELADKIKYYLKFNNKILFDTTKDNGIHKKTSSNDTLMKL 314
>UNIPROTKB|Q8IJQ5 [details] [associations]
symbol:PF10_0137 "GDP-fucose synthase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0006486 "protein
glycosylation" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0016491
GO:GO:0006486 EMBL:AE014185 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:CLSZ2431446 GO:GO:0016857 RefSeq:XP_001347422.1
ProteinModelPortal:Q8IJQ5 GeneID:810295 KEGG:pfa:PF10_0137
EuPathDB:PlasmoDB:PF3D7_1014000 OMA:IRETCEW Uniprot:Q8IJQ5
Length = 329
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 74/239 (30%), Positives = 136/239 (56%)
Query: 72 VIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQP 131
+I AA VGG++AN +F+ NL+I NVI +Y + + +F S+CI+P P
Sbjct: 78 IIHFAAHVGGLYANKNNNLDFLINNLEISMNVIKLCHKYSISRGIFTLSTCIFPVNCSLP 137
Query: 132 IPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENS 191
+ E + G +NE Y+++K + + Y+ +Y + I +PTN+YG DNF+ EN+
Sbjct: 138 LTEEKIHDGKCHQSNEGYSVSKRVLEVLVRFYREKYNYEWICIIPTNIYGKYDNFNLENA 197
Query: 192 HVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEY---------D 242
HV+P+++ + + AKVN V + G GS +R+F++ D+ + ++++ Y D
Sbjct: 198 HVIPSIIHKMYLAKVNNTN-VYLLGDGSAVRQFIYNIDVNKILYYILNHYYSKNLTIIKD 256
Query: 243 GLEHL----NVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARL 297
+ ++ N+ S E+SIKELA+ +K + F ++++D++K +G +K + L +L
Sbjct: 257 NIYNIIFSTNLPSN-ELSIKELADKIKYYLKFNNKILFDTTKDNGIHKKTSSNDTLMKL 314
>UNIPROTKB|E9PP14 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019835 "cytolysis" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0044237
EMBL:AC067930 HGNC:HGNC:12390 IPI:IPI01012947
ProteinModelPortal:E9PP14 SMR:E9PP14 Ensembl:ENST00000533817
ArrayExpress:E9PP14 Bgee:E9PP14 Uniprot:E9PP14
Length = 198
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 68/193 (35%), Positives = 105/193 (54%)
Query: 16 SAKIFVAGHRGLVGSAIVRKLLSLGF----TNLLLRTHAELDLTRQSDVESFFAAEKPSY 71
S +I V G GLVG AI +K+++ G + + + + DLT + + F +P++
Sbjct: 7 SMRILVTGGSGLVGKAI-QKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQPTH 65
Query: 72 VIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQP 131
VI AA VGG+ N Y +F N+ + NV+ SAF G +K++ S+CI+P P
Sbjct: 66 VIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYP 125
Query: 132 IPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENS 191
I E + GP +N Y+ AK +AY QY + +PTN++GP+DNF+ E+
Sbjct: 126 IDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDG 185
Query: 192 HVLPALMRRFHEA 204
HVLP L+ + H A
Sbjct: 186 HVLPGLIHKVHLA 198
>TIGR_CMR|BA_0507 [details] [associations]
symbol:BA_0507 "NAD-dependent epimerase/dehydratase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000168004 HSSP:P32054 RefSeq:NP_843043.1
RefSeq:YP_017126.1 RefSeq:YP_026759.1 ProteinModelPortal:Q81YX3
DNASU:1087740 EnsemblBacteria:EBBACT00000010883
EnsemblBacteria:EBBACT00000018378 EnsemblBacteria:EBBACT00000021242
GeneID:1087740 GeneID:2816749 GeneID:2850006 KEGG:ban:BA_0507
KEGG:bar:GBAA_0507 KEGG:bat:BAS0479 OMA:IRWSYAV
ProtClustDB:CLSK915839 BioCyc:BANT260799:GJAJ-522-MONOMER
BioCyc:BANT261594:GJ7F-544-MONOMER Uniprot:Q81YX3
Length = 321
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 92/330 (27%), Positives = 146/330 (44%)
Query: 16 SAKIFVAGHRGLVGSAIVRKLLSLGFTNLLL--------RTHAEL--DLT----RQSDVE 61
S K + G G +GS + +L+ G+ ++ + H EL ++ D
Sbjct: 2 SKKCLITGGAGFIGSHLAEELVGRGYNVTIVDNFYKGKNKYHDELMKEIRVIPISVLDKN 61
Query: 62 SFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSS 121
S + V+ A + G+ E I N N++ +A + G KK++F +S
Sbjct: 62 SIYELVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALK-GKKKVVFASTS 120
Query: 122 CIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPT---- 177
+Y K P E L G YAI K +C Y A+ G+P
Sbjct: 121 EVYGKAKPPFSEEGDRLYGATSKIRWSYAICKTLEETLCLGY-------ALEGLPVTIVR 173
Query: 178 --NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVV 235
N+YGP P + V+P RF A + G ++++V+G G R F +V D +A +
Sbjct: 174 YFNIYGPRAKDGPY-AGVIP----RFISAALQG-EDILVYGDGEQTRCFTYVSDAVEATI 227
Query: 236 FMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELV---WDSSKPDG---TPRKLM 289
MDE E +N+GS E SIKE+AE +K+ ++V ++ P G P +
Sbjct: 228 RAMDEKVNGEIINIGSENEKSIKEVAEVIKKLTDSSSKIVQVPFEEVYPHGFEEIPNRRP 287
Query: 290 DSSKLARL-GWRAKIELRDGLADTYKWYLE 318
D +KL L ++AK+ DGL +T KW+ E
Sbjct: 288 DVTKLKDLVQFQAKVTWEDGLKETIKWFRE 317
>ZFIN|ZDB-GENE-030131-5718 [details] [associations]
symbol:tgds "TDP-glucose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-030131-5718 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0008460 PANTHER:PTHR10366:SF41
HOVERGEN:HBG007741 HSSP:P26391 EMBL:BC066615 IPI:IPI00496965
UniGene:Dr.80538 ProteinModelPortal:Q6NYF5 Uniprot:Q6NYF5
Length = 347
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 73/269 (27%), Positives = 130/269 (48%)
Query: 60 VESFFAAEKPSYVIVAAAKVGGIHANNTY--PAEFIAINLQIQTNVIDSAFRYGVKKLLF 117
++ F+ E V AA+ H N++ P+ F+ +N+ ++ ++ V++ ++
Sbjct: 72 IKHLFSTEHIDVVFHCAAET---HVENSFVCPSRFMRVNVDGTAVLVRASLEASVQRFIY 128
Query: 118 LGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPT 177
+ + +Y QP E P PTN Y+ +K A + +Y +++KF A+ +
Sbjct: 129 ISTDEVYGDSVDQPFDE----LSPKRPTNP-YSRSKAAAESIVTSYWLKHKFPAVITRSS 183
Query: 178 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFM 237
N+YGP H E V+P + + + + + G+G R FL+V D+ DA + +
Sbjct: 184 NVYGPRQ--HHEK--VIPRFLSLLQQQQ-----KCTIQGSGLQSRHFLYVSDVTDAFLTV 234
Query: 238 MDEYDGLEHLNVGSGKEVSI----KELAEWVKEAVGFEGELVW---DSSKPDGTPRKLMD 290
M++ E N+G+G E+ I +EL + ++V E W +P R M+
Sbjct: 235 MEKGILGEIYNIGTGFEIPIIQLARELVQMTVKSVSAESLDDWLEFVEDRPVTELRYPMN 294
Query: 291 SSKLARLGWRAKIELRDGLADTYKWYLEN 319
S KL RLGWR K+ +G+ T +WY EN
Sbjct: 295 SVKLHRLGWRPKVAWTEGIRRTVQWYEEN 323
>TIGR_CMR|CHY_0979 [details] [associations]
symbol:CHY_0979 "dTDP-glucose 4,6-dehydratase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009225 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:YP_359826.1 ProteinModelPortal:Q3ADF8
SMR:Q3ADF8 STRING:Q3ADF8 GeneID:3726804 KEGG:chy:CHY_0979
PATRIC:21275091 OMA:AEFRPEA ProtClustDB:CLSK2310403
BioCyc:CHYD246194:GJCN-978-MONOMER Uniprot:Q3ADF8
Length = 309
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 83/319 (26%), Positives = 150/319 (47%)
Query: 18 KIFVAGHRGLVGSAIVRK------LL---SLGFTNLLLRTHA--------ELDLTRQSDV 60
KI V G G +GSA VRK L+ L + L R + D+ ++ +
Sbjct: 2 KILVTGGAGFIGSAFVRKYAYDHELIIVDKLTYAGDLRRIEEVRDRIKFYKADVADKTAI 61
Query: 61 ESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGS 120
E F EKP V+ AA+ + + P FI N++ ++D++ +YG++K + + +
Sbjct: 62 EEIFDKEKPEAVVHFAAE-SHVDRSIQDPTPFIETNVKGTQVMLDASRKYGIEKFVHIST 120
Query: 121 SCIYPKFAPQ-PIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNL 179
+Y + + E + PL P N Y+++K A + +AY Y I P N
Sbjct: 121 DEVYGELGKEGQFTEES----PLRP-NSPYSVSKAAADMLARAYHRTYGLPVIVARPCNN 175
Query: 180 YGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMD 239
YGP +PE ++P ++++ +N + + V+G G +RE+L+VDD +AV ++
Sbjct: 176 YGPWQ--YPEK--LIPVVIKK----ALNN-EPIPVYGQGLNVREWLYVDDCIEAVYLLLQ 226
Query: 240 EYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELV-WDSSKPDGTPRKLMDSSKLA-RL 297
+ E N+GSG+E E+ + + +G L+ + +P R ++S K+
Sbjct: 227 KGKPGEAYNIGSGEEKGNIEVVKEILRILGKPESLITFVEDRPGHDFRYSLNSKKIKMNY 286
Query: 298 GWRAKIELRDGLADTYKWY 316
W+ K+ +G+ WY
Sbjct: 287 AWKHKVNFNEGIRFVIDWY 305
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 91/320 (28%), Positives = 147/320 (45%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGF-------------TNL--LLRTHA----ELDLTRQS 58
+ V G G +GS +V +LL+ G TNL L A E D+ +
Sbjct: 2 RALVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLADNSAHVFVEADIVT-A 60
Query: 59 DVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFL 118
D+ + +P V AA++ + + P A+N+ + ++A + GV+K++
Sbjct: 61 DLHAILEQHRPEVVFHLAAQID-VRRSVADPQFDAAVNVIGTVRLAEAARQTGVRKIVHT 119
Query: 119 GSS-CIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPT 177
S IY P PE T P +P + YA K+AG ++ Y + P
Sbjct: 120 SSGGSIYGTPPEYPTPE----TAPTDPASP-YAAGKVAGEIYLNTFRHLYGLDCSHIAPA 174
Query: 178 NLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFM 237
N+YGP + H E V A+ F +A ++G K V+G G+ R+++ VDD+ DA V +
Sbjct: 175 NVYGPRQDPHGEAGVV--AI---FAQALLSG-KPTRVFGDGTNTRDYVFVDDVVDAFVRV 228
Query: 238 MDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLAR- 296
+ G N+G+GKE S ++L V AVG + + + R +D R
Sbjct: 229 SADVGGGLRFNIGTGKETSDRQLHSAVAAAVGGPDDPEFHPPRLGDLKRSCLDIGLAERV 288
Query: 297 LGWRAKIELRDGLADTYKWY 316
LGWR +IEL DG+ T +++
Sbjct: 289 LGWRPQIELADGVRRTVEYF 308
>MGI|MGI:1923605 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 MGI:MGI:1923605 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GeneTree:ENSGT00530000063128
GO:GO:0008460 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 HOVERGEN:HBG007741
OrthoDB:EOG4PVP08 EMBL:AK154341 EMBL:BC021419 IPI:IPI00405383
RefSeq:NP_083854.3 UniGene:Mm.251537 ProteinModelPortal:Q8VDR7
SMR:Q8VDR7 STRING:Q8VDR7 PhosphoSite:Q8VDR7 PRIDE:Q8VDR7
Ensembl:ENSMUST00000022727 GeneID:76355 KEGG:mmu:76355
InParanoid:Q3U4A6 NextBio:344957 Bgee:Q8VDR7 CleanEx:MM_TGDS
Genevestigator:Q8VDR7 GermOnline:ENSMUSG00000022130 Uniprot:Q8VDR7
Length = 355
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 76/275 (27%), Positives = 134/275 (48%)
Query: 53 DLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGV 112
D+ V+ F EK V+ AA+ + + EF +N+ ++++A+ GV
Sbjct: 76 DICDSHFVKLLFEVEKIDIVLHFAAQTH-VDLSFVRAFEFTYVNVYGTHVLVNAAYEAGV 134
Query: 113 KKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAI 172
+K +++ + +Y Q E++ P +PTN YA +K A Q+Y +YKF +
Sbjct: 135 EKFIYVSTDEVYGGSLDQEFDESS----PKQPTNP-YASSKAAAECFVQSYWERYKFPVV 189
Query: 173 SGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLAD 232
+N+YGP+ +PE V+P + N ++ + G+G R FL+ D+ +
Sbjct: 190 ITRSSNVYGPHQ--YPEK--VIPKFISLLQH---N--RKCCIHGSGLQRRNFLYAADVVE 240
Query: 233 AVVFMMDEYDGLEHLNVGSGKEVSI----KELAEWVKEAVGFEGELV-W-D--SSKPDGT 284
A + ++ + + E N+G+ E+S+ KEL + +KE E E W D S +P
Sbjct: 241 AFLTVLTKGEPGEIYNIGTNFEMSVVQLAKELIQLIKET-NSESETESWVDYVSDRPHND 299
Query: 285 PRKLMDSSKLARLGWRAKIELRDGLADTYKWYLEN 319
R M S K+ LGW+ K+ +G+ T +WY +N
Sbjct: 300 MRYPMKSEKIHSLGWKPKVPWEEGIKKTVEWYRKN 334
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 77/275 (28%), Positives = 131/275 (47%)
Query: 53 DLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGV 112
D+ V+ F EK V+ AA+ + + EF +N+ ++ +A V
Sbjct: 76 DICDSHFVKLLFETEKIDIVLHFAAQTH-VDLSFVRAFEFTYVNVYGTHVLVSAAHEARV 134
Query: 113 KKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAI 172
+K +++ + +Y + E++ P +PTN YA +K A Q+Y QYKF +
Sbjct: 135 EKFIYVSTDEVYGGSLDKEFDESS----PKQPTNP-YASSKAAAECFVQSYWEQYKFPVV 189
Query: 173 SGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLAD 232
+N+YGP+ +PE V+P + N ++ + GTG R FL+ D+ +
Sbjct: 190 ITRSSNVYGPHQ--YPEK--VIPKFISLLQH---N--RKCCIHGTGLQTRNFLYATDVVE 240
Query: 233 AVVFMMDEYDGLEHLNVGSGKEVSI----KELAEWVKEAVGFEGELV-W-D--SSKPDGT 284
A + ++ + E N+G+ E+S+ KEL + +KE E E+ W D +P
Sbjct: 241 AFLTVLKKGKPGEIYNIGTNFEMSVLQLAKELIQLIKET-NSESEMENWVDYVDDRPTND 299
Query: 285 PRKLMDSSKLARLGWRAKIELRDGLADTYKWYLEN 319
R M S K+ LGWR K+ ++G+ T +WY EN
Sbjct: 300 MRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWYREN 334
>UNIPROTKB|E2QWQ8 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 EMBL:AAEX03013308
RefSeq:XP_542640.3 Ensembl:ENSCAFT00000008577 GeneID:485521
KEGG:cfa:485521 Uniprot:E2QWQ8
Length = 355
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 76/275 (27%), Positives = 132/275 (48%)
Query: 53 DLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGV 112
D+ V+ F EK V+ AA+ + + EF +N+ ++ +A V
Sbjct: 76 DICNSHFVKLLFETEKIDIVLHFAAQTH-VDLSFVRAFEFTYVNVYGTHVLVSAAHEARV 134
Query: 113 KKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAI 172
+K +++ + +Y + E++ P +PTN YA +K A Q+Y +YKF A+
Sbjct: 135 EKFIYVSTDEVYGGSLDKEFDESS----PKQPTNP-YASSKAAAECFVQSYWERYKFPAV 189
Query: 173 SGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLAD 232
+N+YGP+ +PE V+P + N ++ + G+G R FL+ D+ +
Sbjct: 190 ITRSSNVYGPHQ--YPEK--VIPKFISLLQH---N--RKCCIHGSGLQTRNFLYATDVVE 240
Query: 233 AVVFMMDEYDGLEHLNVGSGKEVSI----KELAEWVKEAVGFEGEL-VW-D--SSKPDGT 284
A + ++ + E N+G+ E+S+ KEL + +KE E E+ W D + +P
Sbjct: 241 AFLTVLKKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETSS-ESEMETWVDYVNDRPTND 299
Query: 285 PRKLMDSSKLARLGWRAKIELRDGLADTYKWYLEN 319
R M S K+ LGWR K+ ++G+ T WY EN
Sbjct: 300 MRYPMKSEKIQGLGWRPKVPWKEGIKKTIDWYREN 334
>RGD|1306544 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 RGD:1306544
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0008460 PANTHER:PTHR10366:SF41 OMA:GFIASHM IPI:IPI00373689
Ensembl:ENSRNOT00000012925 UCSC:RGD:1306544 Uniprot:F1M7R7
Length = 355
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 75/275 (27%), Positives = 132/275 (48%)
Query: 53 DLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGV 112
D+ V+ F +EK V+ AA+ + + EF +N+ ++++A+ V
Sbjct: 76 DICDSHFVKRLFESEKIDIVLHFAAQTH-VDLSFVRAFEFTYVNVYGTHVLVNTAYEARV 134
Query: 113 KKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAI 172
+K +++ + +Y Q E++ P +PTN YA +K A Q+Y +YKF +
Sbjct: 135 EKFIYVSTDEVYGGSLDQEFDESS----PKQPTNP-YASSKAAAECFVQSYWERYKFPVV 189
Query: 173 SGMPTNLYGPNDNFHPENSHVLPALMRRF-HEAKVNGAKEVVVWGTGSPLREFLHVDDLA 231
+N+YGP+ +PE V+P + H+ K + G+G R FL+ D+
Sbjct: 190 ITRSSNVYGPHQ--YPEK--VIPKFISLLQHDRKC------CIHGSGLQRRNFLYAADVV 239
Query: 232 DAVVFMMDEYDGLEHLNVGSGKEVSI----KELAEWVKEAVGFEGELVW-D--SSKPDGT 284
+A + ++ + + E N+G+ E+S+ KEL + +KE W D S +P
Sbjct: 240 EAFLTVLTKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSDSETERWVDYVSDRPHND 299
Query: 285 PRKLMDSSKLARLGWRAKIELRDGLADTYKWYLEN 319
R M S K+ LGW+ K+ +G+ T +WY EN
Sbjct: 300 MRYPMKSEKIHSLGWKPKVPWEEGIKKTVEWYREN 334
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 235 (87.8 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 76/275 (27%), Positives = 132/275 (48%)
Query: 53 DLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGV 112
D+ V+ F EK V+ AA+ + + EF +N+ ++ +A V
Sbjct: 76 DICDSHFVKLLFETEKIDIVLHFAAQTH-VDLSFVRAFEFTYVNVYGTHVLVSAAHEARV 134
Query: 113 KKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAI 172
+K +++ + +Y + E++ P +PTN YA +K A Q+Y QYKF +
Sbjct: 135 EKFIYVSTDEVYGGSLDKEFDESS----PKQPTNP-YASSKAAAECFVQSYWEQYKFPVV 189
Query: 173 SGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLAD 232
+N+YGP+ +PE V+P + N ++ + G+G R FL+ D+ +
Sbjct: 190 ITRSSNVYGPHQ--YPEK--VIPKFISLLQH---N--RKCCIHGSGLQTRNFLYATDVVE 240
Query: 233 AVVFMMDEYDGLEHLNVGSGKEVSI----KELAEWVKEAVGFEGELV-W-D--SSKPDGT 284
A + ++ + E N+G+ E+S+ KEL + +KE E E+ W D + +P
Sbjct: 241 AFLTVLKKGKPGEIYNIGTNFEMSVVQLAKELIQLIKET-NSESEMENWVDYVNDRPTND 299
Query: 285 PRKLMDSSKLARLGWRAKIELRDGLADTYKWYLEN 319
R M S K+ LGWR K+ ++G+ T +WY EN
Sbjct: 300 MRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWYREN 334
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 235 (87.8 bits), Expect = 3.8e-19, P = 3.8e-19
Identities = 78/276 (28%), Positives = 133/276 (48%)
Query: 53 DLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNV-IDSAFRYG 111
D+ ++ F EK V+ AA+ + + + EF +N+ TNV + +A
Sbjct: 81 DICEPHFIKQLFETEKIDIVLHFAAQTH-VDLSFWHALEFTYVNVY-GTNVLVAAAHEAN 138
Query: 112 VKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNA 171
V+K +++ + +Y Q E++ P PTN YA +K A Q+Y +Y+F
Sbjct: 139 VEKFVYVSTDEVYGGSTDQEFDESS----PKCPTNP-YASSKAAAECFVQSYWERYQFPV 193
Query: 172 ISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLA 231
+ +N+YGP+ +PE V+P + + N ++ + G+G R FL+ D+
Sbjct: 194 VITRSSNVYGPHQ--YPEK--VIPKFISLLQQ---N--RKCCIHGSGLQRRNFLYATDVV 244
Query: 232 DAVVFMMDEYDGLEHLNVGSGKEVSI----KELAEWVKEAVGFEGELV-W-D--SSKPDG 283
+A + ++ E E N+G+ E+SI KEL +K+ E E+ W D +P
Sbjct: 245 EAFLTVLKEGKPGEIYNIGTNFEMSIVQLAKELIHLIKKTSS-ESEMEHWMDYVKDRPTN 303
Query: 284 TPRKLMDSSKLARLGWRAKIELRDGLADTYKWYLEN 319
R M S K+ LGWR K+ ++G+ T +WY EN
Sbjct: 304 DLRYPMSSEKMHNLGWRPKVPWKEGIKKTIEWYKEN 339
>TAIR|locus:2150441 [details] [associations]
symbol:GME ""GDP-D-mannose 3',5'-epimerase"" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0047918 "GDP-mannose 3,5-epimerase activity" evidence=ISS;IDA]
[GO:0019853 "L-ascorbic acid biosynthetic process" evidence=TAS]
[GO:0051287 "NAD binding" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] UniPathway:UPA00990 InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0451 Gene3D:3.40.50.720
GO:GO:0051287 GO:GO:0019853 EMBL:AF272706 EMBL:AY057660
EMBL:AY057694 EMBL:AY116953 IPI:IPI00536932 RefSeq:NP_001190417.1
RefSeq:NP_198236.1 UniGene:At.21733 PDB:2C54 PDB:2C59 PDB:2C5A
PDB:2C5E PDBsum:2C54 PDBsum:2C59 PDBsum:2C5A PDBsum:2C5E
ProteinModelPortal:Q93VR3 SMR:Q93VR3 STRING:Q93VR3 PaxDb:Q93VR3
PRIDE:Q93VR3 EnsemblPlants:AT5G28840.1 EnsemblPlants:AT5G28840.2
GeneID:833002 KEGG:ath:AT5G28840 TAIR:At5g28840
HOGENOM:HOG000168017 InParanoid:Q93VR3 KO:K10046 OMA:RKAQTST
PhylomeDB:Q93VR3 ProtClustDB:PLN02695 BioCyc:ARA:AT5G28840-MONOMER
BioCyc:MetaCyc:AT5G28840-MONOMER EvolutionaryTrace:Q93VR3
Genevestigator:Q93VR3 GermOnline:AT5G28840 GO:GO:0047918
Uniprot:Q93VR3
Length = 377
Score = 234 (87.4 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 69/262 (26%), Positives = 123/262 (46%)
Query: 67 EKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPK 126
E +V AA +GG+ + + + N I N+I++A G+K+ + S+CIYP+
Sbjct: 90 EGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPE 149
Query: 127 FAPQPIPENALLTG---PLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPN 183
F +L P EP + Y + K+A ++C+ Y + G N+YGP
Sbjct: 150 FKQLETTNVSLKESDAWPAEPQDA-YGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPF 208
Query: 184 DNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDG 243
+ A R+ A+ + +WG G R F +D+ + V+ + + D
Sbjct: 209 GTWKGGREKAPAAFCRK---AQTS-TDRFEMWGDGLQTRSFTFIDECVEGVL-RLTKSDF 263
Query: 244 LEHLNVGSGKEVSIKELAEWVKEAVGFEGEL--VWDSSKPDGTPRKLMDSSKLA-RLGWR 300
E +N+GS + VS+ E+AE V + FE + + P+G + D++ + +LGW
Sbjct: 264 REPVNIGSDEMVSMNEMAEMV---LSFEEKKLPIHHIPGPEGVRGRNSDNNLIKEKLGWA 320
Query: 301 AKIELRDGLADTYKWYLENVKQ 322
+ L++GL TY W E +++
Sbjct: 321 PNMRLKEGLRITYFWIKEQIEK 342
>TIGR_CMR|CBU_0829 [details] [associations]
symbol:CBU_0829 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000167994 RefSeq:NP_819849.2 ProteinModelPortal:Q83DA9
PRIDE:Q83DA9 GeneID:1208722 KEGG:cbu:CBU_0829 PATRIC:17930355
OMA:ANICAMK ProtClustDB:CLSK914342
BioCyc:CBUR227377:GJ7S-824-MONOMER Uniprot:Q83DA9
Length = 331
Score = 220 (82.5 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 66/241 (27%), Positives = 120/241 (49%)
Query: 88 YPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNE 147
YP N+Q NV+++ GVK+L+F S+ +Y +P+ E P +
Sbjct: 96 YPRSAFQTNIQGTFNVLETCVAQGVKRLVFSSSASVYGDALEEPMTE----AHPFN-SRT 150
Query: 148 WYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVN 207
+Y KIAG M AY +Y + N+YGP ++ +++ A++ + +A
Sbjct: 151 FYGATKIAGEAMATAYHHRYGLPFVGLRYMNVYGPRQDYR--GAYI--AVIMKMLDALDK 206
Query: 208 GAKEVVVWGTGSPLREFLHVDDLADAVVFMM--DEYDGLEHLNVGSGKEVSIKELAEWVK 265
G + + ++G GS +F++V+D A A + M D D E+ NVG+GK SI ELA+ ++
Sbjct: 207 G-QPMTLYGDGSQAYDFVYVEDCAAANICAMKADTVD--EYYNVGTGKRTSILELAKEIQ 263
Query: 266 EAVGFEGELVWDSSKPDGTP--RKLMDSSKLA--RLGWRAKIELRDGLADTYKWYLENVK 321
+ G + + P GT + + K A ++G++A++ L +GL +W ++
Sbjct: 264 KITGTSDNIQF---LPQGTTFVKNRIGCPKKAAEQIGFKAEVGLTEGLQRLIEWRRSHIA 320
Query: 322 Q 322
+
Sbjct: 321 E 321
Score = 43 (20.2 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 15 KSAKIFVAGHRGLVGSAIVRKLL 37
+ K V G GL+GS V +LL
Sbjct: 5 RGKKFVVIGGAGLIGSHTVDRLL 27
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 230 (86.0 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 75/275 (27%), Positives = 132/275 (48%)
Query: 53 DLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGV 112
D+ V+ F EK V+ AA+ + + EF +N+ ++ +A V
Sbjct: 76 DICDSHFVKLLFETEKIDIVLHFAAQTH-VDLSFVRAFEFTYVNVYGTHVLLSAAHEARV 134
Query: 113 KKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAI 172
+K +++ + +Y + E++ P +PTN YA +K A Q+Y +YKF +
Sbjct: 135 EKFIYVSTDEVYGGSLDKEFDESS----PKQPTNP-YASSKAAAECFVQSYWERYKFPVV 189
Query: 173 SGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLAD 232
+N+YGP+ +PE V+P + N ++ + G+G R FL+ D+ +
Sbjct: 190 ITRSSNVYGPHQ--YPEK--VIPKFISLLQH---N--RKCCIHGSGLQTRNFLYATDVVE 240
Query: 233 AVVFMMDEYDGLEHLNVGSGKEVSI----KELAEWVKEAVGFEGELV-W-D--SSKPDGT 284
A + ++ + E N+G+ E+S+ KEL + +KE E E+ W D + +P
Sbjct: 241 AFLTVLKKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETKS-ESEMENWVDYVNDRPTND 299
Query: 285 PRKLMDSSKLARLGWRAKIELRDGLADTYKWYLEN 319
R M S K+ LGWR K+ ++G+ T +WY EN
Sbjct: 300 MRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWYREN 334
>TIGR_CMR|CJE_1513 [details] [associations]
symbol:CJE_1513 "NAD-dependent epimerase/dehydratase
family protein" species:195099 "Campylobacter jejuni RM1221"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
RefSeq:YP_179498.1 ProteinModelPortal:Q5HT87 STRING:Q5HT87
GeneID:3232144 KEGG:cjr:CJE1513 PATRIC:20044818 OMA:EVFRLCC
ProtClustDB:CLSK864552 BioCyc:CJEJ195099:GJC0-1541-MONOMER
Uniprot:Q5HT87
Length = 323
Score = 211 (79.3 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 81/326 (24%), Positives = 152/326 (46%)
Query: 19 IFVAGHRGLVGSAIVRKLLSLGFTNLLLRT--------HAEL-----DLTRQS-DVESFF 64
I V G G +GS + L+ GF L H E D+ S D+ F
Sbjct: 4 ILVTGADGFIGSHLCESLVKKGFKVRALSQYNSFNFWGHLEKSPFLKDMEVVSGDLRDSF 63
Query: 65 AAEKPSYVIVAAAKVGGIHA---NNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSS 121
EK + I A +G + A + T P ++ N+ N++++A + + + +S
Sbjct: 64 FCEKITKNIDAIFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAKKNEISHFIHTSTS 123
Query: 122 CIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYG 181
+Y PI E PL+P + Y+ +KIA M +Y + N P N YG
Sbjct: 124 EVYGTAFYVPIDEKH----PLQPQSP-YSASKIAADMMALSYYNSFNLNVNIARPFNTYG 178
Query: 182 PNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMD-E 240
P + ++P ++ + ++GAKE+ + G SP R+ V D + + +++ +
Sbjct: 179 PRQSARA----IIPTIITQI----LSGAKEIKL-GDLSPKRDLNFVLDTCEGFISLLNLK 229
Query: 241 YDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSK--PDGTP--RKLMDSSKLAR 296
+ G E N+GSG E S++E+ +++ + + +++ D + P + R D++KL +
Sbjct: 230 HFG-EVYNIGSGVEYSMQEVLNLIQKILDSKVKIIQDEQRLRPKNSEVFRLCCDANKLKK 288
Query: 297 L-GWRAKIELRDGLADTYKWYLENVK 321
W++KI L +GL + +++ EN++
Sbjct: 289 ATNWQSKISLEEGLRQSIEYFKENLE 314
>UNIPROTKB|Q9ZAE8 [details] [associations]
symbol:acbB "dTDP-glucose 4,6-dehydratase" species:134676
"Actinoplanes sp. SE50/110" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0045226 GO:GO:0008460 TIGRFAMs:TIGR01181
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:Y18523 EMBL:CP003170
RefSeq:YP_006266644.1 ProteinModelPortal:Q9ZAE8 SMR:Q9ZAE8
GeneID:12821023 KEGG:ase:ACPL_3681 Uniprot:Q9ZAE8
Length = 320
Score = 195 (73.7 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 66/232 (28%), Positives = 110/232 (47%)
Query: 92 FIAINLQIQTNVI-DSAFRYGVKKLLFLGSSCIYPKFAPQPIPENALLTG-PLEPTNEWY 149
F+A NL + T V+ D+A R+ + + L + + +Y I + G PL P N Y
Sbjct: 100 FVASNL-VGTQVLLDAALRHHIGRFLHVSTDEVYGS-----IDTGSWAEGHPLAP-NSPY 152
Query: 150 AIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGA 209
A +K + AY + + + +N YGP PE ++P + R ++G
Sbjct: 153 AASKAGSDLLALAYHQTHGMDVVVTRCSNNYGPRQ--FPEK--MIPLFVTRL----LDGL 204
Query: 210 KEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVG 269
+V V+G G +R++LHV D + + E ++G G E + EL E + EA G
Sbjct: 205 -DVPVYGDGRNIRDWLHVSDHCRGLALALGAGRAGEVYHIGGGWEATNLELTEILLEACG 263
Query: 270 FEGELVWDSSKPDGTPRKL-MDSSKLA-RLGWRAKIELRDGLADTYKWYLEN 319
+ + G R+ +D SK+A LG+R +++ DG+A+T WY N
Sbjct: 264 APASRISFVTDRKGHDRRYSLDYSKIAGELGYRPRVDFTDGIAETVAWYRAN 315
Score = 46 (21.3 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 18 KIFVAGHRGLVGSAIVRKLLS 38
KI V G G +GS V L+S
Sbjct: 2 KILVTGGAGFIGSHFVTSLIS 22
>UNIPROTKB|P29782 [details] [associations]
symbol:strE "dTDP-glucose 4,6-dehydratase" species:1911
"Streptomyces griseus" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0019872 "streptomycin biosynthetic
process" evidence=IGI] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00066
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0019872 GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 PANTHER:PTHR10366:SF41 EMBL:X62567 PIR:S18617
ProteinModelPortal:P29782 SMR:P29782 Uniprot:P29782
Length = 328
Score = 190 (71.9 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 62/227 (27%), Positives = 106/227 (46%)
Query: 92 FIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAI 151
F+ N+ ++D+A R+GV + + + +Y E+ PL P N Y+
Sbjct: 98 FVRTNVHGTQTLLDAATRHGVASFVQVSTDEVYGSLEHGSWTEDE----PLRP-NSPYSA 152
Query: 152 AKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKE 211
+K +G + A+ + + + +N YGP PE L+ RF ++G +
Sbjct: 153 SKASGDLLALAHHVSHGLDVRVTRCSNNYGPRQ--FPEK------LIPRFITLLMDGHR- 203
Query: 212 VVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFE 271
V ++G G +RE+LHVDD + + N+G G +S KEL + EA G +
Sbjct: 204 VPLYGDGLNVREWLHVDDHVRGIEAVRTRGRAGRVYNIGGGATLSNKELVGLLLEAAGAD 263
Query: 272 -GELVWDSSKPDGTPRKLMDSSKLAR-LGWRAKIELRDGLADTYKWY 316
G + + + R +DS+++ R LG+ ++L DGLA T WY
Sbjct: 264 WGSVEYVEDRKGHDRRYAVDSTRIQRELGFAPAVDLADGLAATVAWY 310
Score = 45 (20.9 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 19 IFVAGHRGLVGSAIVRKLLSLG 40
+ V G G +GS VR LL G
Sbjct: 5 LLVTGAAGFIGSQYVRTLLGPG 26
>WB|WBGene00008132 [details] [associations]
symbol:gale-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0042335
"cuticle development" evidence=IGI;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0042335 GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:THAPIDA EMBL:Z99709 GeneID:173171
KEGG:cel:CELE_C47B2.6 UCSC:C47B2.6b CTD:173171 NextBio:878565
RefSeq:NP_001021052.1 ProteinModelPortal:Q564Q1 SMR:Q564Q1
STRING:Q564Q1 PRIDE:Q564Q1 EnsemblMetazoa:C47B2.6b
WormBase:C47B2.6b InParanoid:Q564Q1 ArrayExpress:Q564Q1
Uniprot:Q564Q1
Length = 349
Score = 178 (67.7 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 74/288 (25%), Positives = 129/288 (44%)
Query: 52 LDLTRQSDVESFFAAEKPSYVI-VAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRY 110
+D+ ++ +E F+ K +I +AA K G + P ++ + NL N+I +Y
Sbjct: 65 VDVCDEAALEKVFSENKFDGIIHLAALKAVG--ESVAKPLQYYSNNLVASLNLIQMCLKY 122
Query: 111 GVKKLLFLGSSCIYPKFAPQPIPENAL----LTGPLEPTNEWYAIAKIAGIKMCQAYQ-- 164
VK +F S+ +Y + PI E + +T P T Y + +I I + +A
Sbjct: 123 NVKNFVFSSSATVYGPPSELPITEKSQTGQGITNPYGQTK--YMMEQIL-IDVGKANPEW 179
Query: 165 ----IQYKFNAISGMPTNLYGPNDNFHPEN--SHVLPALMRRFHEAKVNGAKEVVVWGTG 218
++Y FN + + L G + P N +V + + + G + V GTG
Sbjct: 180 NVVLLRY-FNPVGAHKSGLIGEDPKGVPNNLMPYVSQVAIGKLPVLTIYGDQFDTVDGTG 238
Query: 219 SPLREFLHVDDLADAVVFMMDEYD-----GLEHLNVGSGKEVSIKELAEWVKEAVGFEGE 273
+R+++HV DLA V D G E N+G+G S++++ + +K+ G +
Sbjct: 239 --VRDYIHVVDLAKGHVKAFDRIKTVGNIGTEIYNLGTGVGYSVRQMVDALKKVSGRDIP 296
Query: 274 LVWDSSKPDGTPRKLMDSSKLA--RLGWRAKIELRDGLADTYKWYLEN 319
+ +P D S LA +LGWRA+ L + AD + W +N
Sbjct: 297 VKIGVPRPGDVASVYCDPS-LAQEKLGWRAETGLEEMCADLWNWQTKN 343
Score = 54 (24.1 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 19 IFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHA 50
I V G G +GS V +LL+ G+T L + A
Sbjct: 3 ILVTGAAGFIGSHTVLELLNSGYTVLCIDNFA 34
>TIGR_CMR|CHY_0545 [details] [associations]
symbol:CHY_0545 "UDP-glucose 4-epimerase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_359403.1 ProteinModelPortal:Q3AEN1 SMR:Q3AEN1
STRING:Q3AEN1 GeneID:3728483 KEGG:chy:CHY_0545 PATRIC:21274237
OMA:DTEDGSC BioCyc:CHYD246194:GJCN-546-MONOMER Uniprot:Q3AEN1
Length = 327
Score = 186 (70.5 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 79/331 (23%), Positives = 156/331 (47%)
Query: 19 IFVAGHRGLVGSAIVRKLL----SLGFTNLLLRTHAELDLTRQSDVESFFAAEK------ 68
I V G G +GS IVR+L + + L + H + TR + F E
Sbjct: 2 ILVTGGAGYIGSHIVRQLCLKNEKVLVVDNLSKGHKKAVDTRAKLIVGDFGDENLLLEIF 61
Query: 69 PSYVIVAAAKVGG---IHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYP 125
Y I A + + + + P ++ N+ +++ + VKK++F ++ +Y
Sbjct: 62 KKYDIKAVIHMAAQSLVGESMSQPEKYFEENISKTLSLLKVMLKANVKKMVFSSTAAVYG 121
Query: 126 KFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMC-QAYQIQYKFNAISGMPTNLYG--P 182
+ PI E+ P +PTN Y +K+ I+ C + Y+ + FN +S N G P
Sbjct: 122 EPEKWPITEDF----PQKPTNV-YGYSKLV-IEQCLEWYRQIHGFNYVSLRYFNAAGADP 175
Query: 183 NDNF---HPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSP------LREFLHVDDLADA 233
+ + H +H++P + + + +E+ V+GT P +R+++HV+DLA+A
Sbjct: 176 SGDIGEDHNPETHLIPLIFKVI----LGEQEELTVFGTDYPTPDGTCIRDYIHVNDLAEA 231
Query: 234 VVFMMDEYDGLEH--LNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDS 291
+ +++ + E N+G+ K S+KE+ + +E G + ++ + +P G P L+ S
Sbjct: 232 HILALNKLNKDESGVYNLGNQKGFSVKEIIKVAEEVTGVKVKVRYGQRRP-GDPAVLVAS 290
Query: 292 S-KLAR-LGWRAKI-ELRDGLADTYKWYLEN 319
S K+ + L + K +++ + ++W+ N
Sbjct: 291 SEKIQKELNFTPKFGDIKTIVQTAWEWHKNN 321
>TAIR|locus:2099372 [details] [associations]
symbol:RHM3 "rhamnose biosynthesis 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=ISS;IDA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005913 Pfam:PF01370 Pfam:PF04321
InterPro:IPR016040 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016829 EMBL:AP002061 GO:GO:0008831
GO:GO:0045226 HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260
GO:GO:0010280 GO:GO:0010253 eggNOG:COG1088 EMBL:AY078958
EMBL:AY142060 IPI:IPI00525100 RefSeq:NP_188097.1 UniGene:At.27812
ProteinModelPortal:Q9LH76 SMR:Q9LH76 IntAct:Q9LH76 STRING:Q9LH76
PaxDb:Q9LH76 PRIDE:Q9LH76 EnsemblPlants:AT3G14790.1 GeneID:820707
KEGG:ath:AT3G14790 TAIR:At3g14790 InParanoid:Q9LH76 OMA:TARMNNI
PhylomeDB:Q9LH76 Genevestigator:Q9LH76 GermOnline:AT3G14790
Uniprot:Q9LH76
Length = 664
Score = 190 (71.9 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 51/181 (28%), Positives = 91/181 (50%)
Query: 142 LEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRF 201
L PTN Y+ K + AY Y I+ N+YGPN PE L+ +F
Sbjct: 153 LLPTNP-YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ--FPEK------LIPKF 203
Query: 202 HEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHL-NVGSGKEVSIKEL 260
+NG K + + G GS +R +L+ +D+A+A ++ + + + H+ N+G+ +E + ++
Sbjct: 204 ILLAMNG-KPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE-VNHVYNIGTTRERRVIDV 261
Query: 261 AEWVKEAVGFEGE--LVWDSSKPDGTPRKLMDSSKLARLGWRAKIELRDGLADTYKWYLE 318
A + + G + + + + ++P R +D KL +LGW + +GL T +WY E
Sbjct: 262 ANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKLKKLGWCERTNWEEGLRKTMEWYTE 321
Query: 319 N 319
N
Sbjct: 322 N 322
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 184 (69.8 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 85/330 (25%), Positives = 135/330 (40%)
Query: 11 FLSEKSAK-IFVAGHRGLVGSAIVRKLLSLG---------FTNLLLRT-----HAELDLT 55
FLSEK K I + G G VGS + KL+ G FT H +L
Sbjct: 25 FLSEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELI 84
Query: 56 RQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKL 115
VE + Y + + A N P + + N N++ A R G + L
Sbjct: 85 NHDVVEPLYIEVDQIYHLASPASPPNYMYN---PIKTLKTNTIGTLNMLGLAKRVGAR-L 140
Query: 116 LFLGSSCIYPKFAPQPIPENALLTGPLEPTNE--WYAIAKIAGIKMCQAYQIQYKFNAIS 173
L +S +Y P+ P++ G + P Y K MC AY Q
Sbjct: 141 LLASTSEVYGD--PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRV 198
Query: 174 GMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADA 233
N +GP H + V+ F + G + + V+G+GS R F +V DL +
Sbjct: 199 ARIFNTFGPR--MHMNDGRVVS----NFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNG 251
Query: 234 VVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSK 293
+V +M+ + +N+G+ +E +I E A+ +K VG E+ + S D P+K K
Sbjct: 252 LVALMNS-NVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDD-PQKRKPDIK 309
Query: 294 LARL--GWRAKIELRDGLADTYKWYLENVK 321
A+L GW + L +GL ++ + ++
Sbjct: 310 KAKLMLGWEPVVPLEEGLNKAIHYFRKELE 339
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 184 (69.8 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 85/330 (25%), Positives = 134/330 (40%)
Query: 11 FLSEKSAK-IFVAGHRGLVGSAIVRKLLSLG---------FTNLLLRT-----HAELDLT 55
FLSEK K I + G G VGS + KL+ G FT H +L
Sbjct: 59 FLSEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELI 118
Query: 56 RQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKL 115
VE + Y + + A N P + + N N++ A R G + L
Sbjct: 119 NHDVVEPLYIEVDQIYHLASPASPPNYMYN---PIKTLKTNTIGTLNMLGLAKRVGAR-L 174
Query: 116 LFLGSSCIYPKFAPQPIPENALLTGPLEPTNE--WYAIAKIAGIKMCQAYQIQYKFNAIS 173
L +S +Y P+ P+ G + P Y K MC AY Q
Sbjct: 175 LLASTSEVYGD--PEVHPQTEDYWGHVNPVGPRACYDEGKRVAETMCYAYMKQEGVEVRV 232
Query: 174 GMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADA 233
N +GP H + V+ F + G + + V+G+GS R F +V DL +
Sbjct: 233 ARIFNTFGPR--MHMNDGRVVS----NFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNG 285
Query: 234 VVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSK 293
+V +M+ + +N+G+ +E +I E A+ +K VG E+ + S D P+K K
Sbjct: 286 LVALMNS-NVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDD-PQKRKPDIK 343
Query: 294 LARL--GWRAKIELRDGLADTYKWYLENVK 321
A+L GW + L +GL ++ + ++
Sbjct: 344 KAKLMLGWEPVVPLEEGLNKAIHYFRKELE 373
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 184 (69.8 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 86/330 (26%), Positives = 134/330 (40%)
Query: 11 FLSEKSAK-IFVAGHRGLVGSAIVRKLLSLG---------FTNLLLRT-----HAELDLT 55
FLSEK K I V G G VGS + KL+ G FT H +L
Sbjct: 82 FLSEKDRKRILVTGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELI 141
Query: 56 RQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKL 115
VE + Y + + A N P + + N N++ A R G + L
Sbjct: 142 NHDVVEPLYIEVDQIYHLASPASPPNYMYN---PIKTLKTNTIGTLNMLGLAKRVGAR-L 197
Query: 116 LFLGSSCIYPKFAPQPIPENALLTGPLEPTNE--WYAIAKIAGIKMCQAYQIQYKFNAIS 173
L +S +Y P+ P+ G + P Y K MC AY Q
Sbjct: 198 LLASTSEVYGD--PEVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRV 255
Query: 174 GMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADA 233
N +GP H + V+ F + G + + V+G+GS R F +V DL +
Sbjct: 256 ARIFNTFGPR--MHMNDGRVVS----NFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNG 308
Query: 234 VVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSK 293
+V +M+ + +N+G+ +E +I E A+ +K VG E+ + S D P+K K
Sbjct: 309 LVALMNS-NVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDD-PQKRKPDIK 366
Query: 294 LARL--GWRAKIELRDGLADTYKWYLENVK 321
A+L GW + L +GL ++ + ++
Sbjct: 367 KAKLMLGWEPVVPLEEGLNKAIHYFRKELE 396
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 184 (69.8 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 85/330 (25%), Positives = 135/330 (40%)
Query: 11 FLSEKSAK-IFVAGHRGLVGSAIVRKLLSLG---------FTNLLLRT-----HAELDLT 55
FLSEK K I + G G VGS + KL+ G FT H +L
Sbjct: 82 FLSEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELI 141
Query: 56 RQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKL 115
VE + Y + + A N P + + N N++ A R G + L
Sbjct: 142 NHDVVEPLYIEVDQIYHLASPASPPNYMYN---PIKTLKTNTIGTLNMLGLAKRVGAR-L 197
Query: 116 LFLGSSCIYPKFAPQPIPENALLTGPLEPTNE--WYAIAKIAGIKMCQAYQIQYKFNAIS 173
L +S +Y P+ P++ G + P Y K MC AY Q
Sbjct: 198 LLASTSEVYGD--PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRV 255
Query: 174 GMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADA 233
N +GP H + V+ F + G + + V+G+GS R F +V DL +
Sbjct: 256 ARIFNTFGPR--MHMNDGRVVS----NFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNG 308
Query: 234 VVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSK 293
+V +M+ + +N+G+ +E +I E A+ +K VG E+ + S D P+K K
Sbjct: 309 LVALMNS-NVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDD-PQKRKPDIK 366
Query: 294 LARL--GWRAKIELRDGLADTYKWYLENVK 321
A+L GW + L +GL ++ + ++
Sbjct: 367 KAKLMLGWEPVVPLEEGLNKAIHYFRKELE 396
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 184 (69.8 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 85/330 (25%), Positives = 135/330 (40%)
Query: 11 FLSEKSAK-IFVAGHRGLVGSAIVRKLLSLG---------FTNLLLRT-----HAELDLT 55
FLSEK K I + G G VGS + KL+ G FT H +L
Sbjct: 82 FLSEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELI 141
Query: 56 RQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKL 115
VE + Y + + A N P + + N N++ A R G + L
Sbjct: 142 NHDVVEPLYIEVDQIYHLASPASPPNYMYN---PIKTLKTNTIGTLNMLGLAKRVGAR-L 197
Query: 116 LFLGSSCIYPKFAPQPIPENALLTGPLEPTNE--WYAIAKIAGIKMCQAYQIQYKFNAIS 173
L +S +Y P+ P++ G + P Y K MC AY Q
Sbjct: 198 LLASTSEVYGD--PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRV 255
Query: 174 GMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADA 233
N +GP H + V+ F + G + + V+G+GS R F +V DL +
Sbjct: 256 ARIFNTFGPR--MHMNDGRVVS----NFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNG 308
Query: 234 VVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSK 293
+V +M+ + +N+G+ +E +I E A+ +K VG E+ + S D P+K K
Sbjct: 309 LVALMNS-NVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDD-PQKRKPDIK 366
Query: 294 LARL--GWRAKIELRDGLADTYKWYLENVK 321
A+L GW + L +GL ++ + ++
Sbjct: 367 KAKLMLGWEPVVPLEEGLNKAIHYFRKELE 396
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 184 (69.8 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 85/330 (25%), Positives = 135/330 (40%)
Query: 11 FLSEKSAK-IFVAGHRGLVGSAIVRKLLSLG---------FTNLLLRT-----HAELDLT 55
FLSEK K I + G G VGS + KL+ G FT H +L
Sbjct: 82 FLSEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELI 141
Query: 56 RQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKL 115
VE + Y + + A N P + + N N++ A R G + L
Sbjct: 142 NHDVVEPLYIEVDQIYHLASPASPPNYMYN---PIKTLKTNTIGTLNMLGLAKRVGAR-L 197
Query: 116 LFLGSSCIYPKFAPQPIPENALLTGPLEPTNE--WYAIAKIAGIKMCQAYQIQYKFNAIS 173
L +S +Y P+ P++ G + P Y K MC AY Q
Sbjct: 198 LLASTSEVYGD--PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRV 255
Query: 174 GMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADA 233
N +GP H + V+ F + G + + V+G+GS R F +V DL +
Sbjct: 256 ARIFNTFGPR--MHMNDGRVVS----NFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNG 308
Query: 234 VVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSK 293
+V +M+ + +N+G+ +E +I E A+ +K VG E+ + S D P+K K
Sbjct: 309 LVALMNS-NVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDD-PQKRKPDIK 366
Query: 294 LARL--GWRAKIELRDGLADTYKWYLENVK 321
A+L GW + L +GL ++ + ++
Sbjct: 367 KAKLMLGWEPVVPLEEGLNKAIHYFRKELE 396
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 184 (69.8 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 85/330 (25%), Positives = 135/330 (40%)
Query: 11 FLSEKSAK-IFVAGHRGLVGSAIVRKLLSLG---------FTNLLLRT-----HAELDLT 55
FLSEK K I + G G VGS + KL+ G FT H +L
Sbjct: 82 FLSEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELI 141
Query: 56 RQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKL 115
VE + Y + + A N P + + N N++ A R G + L
Sbjct: 142 NHDVVEPLYIEVDQIYHLASPASPPNYMYN---PIKTLKTNTIGTLNMLGLAKRVGAR-L 197
Query: 116 LFLGSSCIYPKFAPQPIPENALLTGPLEPTNE--WYAIAKIAGIKMCQAYQIQYKFNAIS 173
L +S +Y P+ P++ G + P Y K MC AY Q
Sbjct: 198 LLASTSEVYGD--PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRV 255
Query: 174 GMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADA 233
N +GP H + V+ F + G + + V+G+GS R F +V DL +
Sbjct: 256 ARIFNTFGPR--MHMNDGRVVS----NFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNG 308
Query: 234 VVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSK 293
+V +M+ + +N+G+ +E +I E A+ +K VG E+ + S D P+K K
Sbjct: 309 LVALMNS-NVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDD-PQKRKPDIK 366
Query: 294 LARL--GWRAKIELRDGLADTYKWYLENVK 321
A+L GW + L +GL ++ + ++
Sbjct: 367 KAKLMLGWEPVVPLEEGLNKAIHYFRKELE 396
>TAIR|locus:2014235 [details] [associations]
symbol:RHD1 "ROOT HAIR DEFECTIVE 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0010053 "root epidermal cell differentiation" evidence=IMP]
[GO:0009832 "plant-type cell wall biogenesis" evidence=TAS]
[GO:0009969 "xyloglucan biosynthetic process" evidence=IMP]
[GO:0010246 "rhamnogalacturonan I biosynthetic process"
evidence=IMP] [GO:0010306 "rhamnogalacturonan II biosynthetic
process" evidence=IMP] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005795 GO:GO:0009832 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GO:GO:0010053 EMBL:AC066689 GO:GO:0009969 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:BT011226 EMBL:BT012154 IPI:IPI00537209
RefSeq:NP_176625.1 UniGene:At.25758 ProteinModelPortal:Q9C7W7
SMR:Q9C7W7 STRING:Q9C7W7 PaxDb:Q9C7W7 PRIDE:Q9C7W7
EnsemblPlants:AT1G64440.1 GeneID:842752 KEGG:ath:AT1G64440
TAIR:At1g64440 InParanoid:Q9C7W7 OMA:HVAGYKY PhylomeDB:Q9C7W7
Genevestigator:Q9C7W7 Uniprot:Q9C7W7
Length = 348
Score = 174 (66.3 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 70/291 (24%), Positives = 124/291 (42%)
Query: 46 LRTHAELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVID 105
L H ++DL + +E F+ K V+ A + + + P + NL +++
Sbjct: 57 LTVH-QVDLRDKPALEKVFSETKFDAVMHFAG-LKAVGESVAKPLLYYNNNLIATITLLE 114
Query: 106 SAFRYGVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQ- 164
+G KKL+F S+ +Y P E + L+G + P Y K+ +C+ Q
Sbjct: 115 VMAAHGCKKLVFSSSATVYGWPKEVPCTEESPLSG-MSP----YGRTKLFIEDICRDVQR 169
Query: 165 ---------IQYKFNAISGMPTNLYGPNDNFHPEN--SHVLPALMRRFHEAKVNGAKEVV 213
++Y FN + P+ G + P N +V ++ R K+ G
Sbjct: 170 GDPEWRIIMLRY-FNPVGAHPSGRIGEDPCGTPNNLMPYVQQVVVGRLPNLKIYGTDYTT 228
Query: 214 VWGTGSPLREFLHVDDLADAVVFMMDEYD----GLEHLNVGSGKEVSIKELAEWVKEAVG 269
GTG +R+++HV DLAD + + + D G E N+G+GK ++ E+ + ++A G
Sbjct: 229 KDGTG--VRDYIHVVDLADGHICALQKLDDTEIGCEVYNLGTGKGTTVLEMVDAFEKASG 286
Query: 270 FEGELVWDSSKPDGTPRKLMDSSKLAR-LGWRAKIELRDGLADTYKWYLEN 319
+ LV +P + K R L W+A + + D + W N
Sbjct: 287 MKIPLVKVGRRPGDAETVYASTEKAERELNWKANFGIEEMCRDQWNWASNN 337
Score = 44 (20.5 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 19 IFVAGHRGLVGSAIVRKLLSLGFTNLLL 46
I V G G +GS V +LL G+ +++
Sbjct: 5 ILVTGGAGYIGSHTVLQLLLGGYNTVVI 32
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 182 (69.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 83/329 (25%), Positives = 133/329 (40%)
Query: 11 FLSEKSAK-IFVAGHRGLVGSAIVRKLLSLG---------FTNLLLRT-----HAELDLT 55
FLSEK K I + G G VGS + KL+ G FT H +L
Sbjct: 83 FLSEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELI 142
Query: 56 RQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKL 115
VE + Y + + A N P + + N N++ A R G + L
Sbjct: 143 NHDVVEPLYIEVDQIYHLASPASPPNYMYN---PIKTLKTNTIGTLNMLGLAKRVGAR-L 198
Query: 116 LFLGSSCIYPKFAPQPIPENALLTGPLEPTNE--WYAIAKIAGIKMCQAYQIQYKFNAIS 173
L +S +Y P+ P+N G + P Y K MC AY Q
Sbjct: 199 LLASTSEVYGD--PEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRV 256
Query: 174 GMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADA 233
N +GP H + V+ F + G + + V+G G+ R F +V DL +
Sbjct: 257 ARIFNTFGPR--MHMNDGRVVS----NFILQALQG-EPLTVYGPGTQTRAFQYVSDLVNG 309
Query: 234 VVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSK 293
+V +M+ + +N+G+ +E +I E A+ +K+ VG E+ + S D ++ D K
Sbjct: 310 LVALMNS-NVSSPVNLGNPEEHTILEFAQLIKKLVGSGSEIQFLSEAQDDPQKRKPDIRK 368
Query: 294 LARL-GWRAKIELRDGLADTYKWYLENVK 321
L GW + L +GL ++ + ++
Sbjct: 369 AKLLLGWEPVVPLEEGLNKAIHYFRKELE 397
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 185 (70.2 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 63/244 (25%), Positives = 119/244 (48%)
Query: 83 HANNTY--PAEFIAINLQIQTNVIDSAFRY-G-VKKLLFLGSSCIYPKFAPQPIPENALL 138
H +N++ EF N+ T+V+ A + G +++ + + + +Y + N
Sbjct: 94 HVDNSFGNSFEFTKNNIY-GTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAAVGNHEA 152
Query: 139 TGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALM 198
+ L PTN Y+ K + AY Y I+ N+YGPN PE ++P
Sbjct: 153 S-QLLPTNP-YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ--FPEK--MIP--- 203
Query: 199 RRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHL-NVGSGKEVSI 257
+F ++G K + + G GS +R +L+ +D+A+A ++ + + + H+ NVG+ +E +
Sbjct: 204 -KFILLAMSG-KPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE-IGHVYNVGTKRERRV 260
Query: 258 KELAEWVKEAVGFEGE--LVWDSSKPDGTPRKLMDSSKLARLGWRAKIELRDGLADTYKW 315
++A + + G + E + + ++P R +D KL +LGW+ + DGL T W
Sbjct: 261 IDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKLKKLGWQERTNWEDGLKKTMDW 320
Query: 316 YLEN 319
Y +N
Sbjct: 321 YTQN 324
>TIGR_CMR|GSU_1975 [details] [associations]
symbol:GSU_1975 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
HSSP:P95780 ProtClustDB:CLSK864552 RefSeq:NP_953024.1
ProteinModelPortal:Q74BR6 GeneID:2685764 KEGG:gsu:GSU1975
PATRIC:22026813 OMA:AMKGCDV BioCyc:GSUL243231:GH27-1926-MONOMER
InterPro:IPR026390 TIGRFAMs:TIGR04180 Uniprot:Q74BR6
Length = 336
Score = 179 (68.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 85/338 (25%), Positives = 145/338 (42%)
Query: 15 KSAKIFVAGHRGLVGSAIVRKLLSLGF-TNLLLR----------THAELDLTRQSDV--- 60
K KI V G G +GS + LL G+ T + H + +L + DV
Sbjct: 4 KGKKILVTGADGFIGSHLTEALLMRGYDTRAFVYYNSFNSWGWLDHLDPELLKSLDVFAG 63
Query: 61 -----ESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKL 115
A K V++ A + I + P ++ N++ NV+ +A GV K+
Sbjct: 64 DIRDPHGVREAMKGCDVVLHLAALIAIPYSYHSPDTYVDTNVKGTLNVVQAARELGVAKV 123
Query: 116 LFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGM 175
+ +S +Y PI E L G P Y+ +KI ++ ++ +
Sbjct: 124 VHTSTSEVYGTARFVPITEEHPLQGQ-SP----YSASKIGADQIAMSFYSSFDTPVAIIR 178
Query: 176 PTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHV-DDLADAV 234
P N YGP + +P ++ + +GA+ + + G P R+ +V D +A +
Sbjct: 179 PFNTYGPRQSARA----FIPTVITQI----ASGARTLRL-GALHPTRDLNYVADTVAGFI 229
Query: 235 VFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSK--PDGTP--RKLMD 290
E E +N+GS E+S+ E A + + +G + E+V D+ + PD + R D
Sbjct: 230 AVAESEKSVGEVINIGSNFEISMGETARMIADVMGADVEIVTDAERLRPDKSEVERLWAD 289
Query: 291 SSKLARL-----GWRAKIELRDGLADTYKWYL--ENVK 321
+SK RL + K LR GL +T +W++ EN+K
Sbjct: 290 TSKAKRLLDHGQNYGGKDGLRRGLVETVEWFVRPENLK 327
>UNIPROTKB|P37759 [details] [associations]
symbol:rfbB "RmlB" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;ISS] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;ISS] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 OMA:KWWSRVL EMBL:U09876
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PIR:H64969 RefSeq:NP_416545.1 RefSeq:YP_490283.1
ProteinModelPortal:P37759 SMR:P37759 DIP:DIP-10680N IntAct:P37759
MINT:MINT-1302103 PRIDE:P37759 EnsemblBacteria:EBESCT00000003521
EnsemblBacteria:EBESCT00000014484 GeneID:12930685 GeneID:945276
KEGG:ecj:Y75_p2004 KEGG:eco:b2041 PATRIC:32119415 EchoBASE:EB2311
EcoGene:EG12412 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT-MONOMER
BioCyc:ECOL316407:JW2026-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT-MONOMER Genevestigator:P37759
PANTHER:PTHR10366:SF41 Uniprot:P37759
Length = 361
Score = 161 (61.7 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 77/299 (25%), Positives = 135/299 (45%)
Query: 49 HAELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVI-DSA 107
HA D+ + FA +P V+ AA+ + + T PA FI N+ + T V+ ++A
Sbjct: 56 HA--DICDAPAMARIFAQHQPDAVMHLAAE-SHVDRSITGPAAFIETNI-VGTYVLLEAA 111
Query: 108 FRY-----GVKKLLF----LGSSCIYPKFAPQPIPENALLTGPL--EPT----NEWYAIA 152
Y KK F + + +Y P P N PL E T + Y+ +
Sbjct: 112 RNYWSALDSDKKNSFRFHHISTDEVYGDL-PHPDEVNNTEELPLFTETTAYAPSSPYSAS 170
Query: 153 KIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFH-PENSHVLPALMRRFHEAKVNGAKE 211
K + + +A++ Y I +N YGP +H PE ++P ++ E K
Sbjct: 171 KASSDHLVRAWKRTYGLPTIVTNCSNNYGP---YHFPEK--LIPLVILNALEGKA----- 220
Query: 212 VVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKE-------VSIKELA-EW 263
+ ++G G +R++L+V+D A A+ ++ E E N+G E ++I +L E
Sbjct: 221 LPIYGKGDQIRDWLYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDEI 280
Query: 264 VKEAVGFEGELVWDSSKPDGTPRKLMDSSKLAR-LGWRAKIELRDGLADTYKWYLENVK 321
V + + ++ + + +P R +D+ K+ R LGW+ + G+ T +WYL N K
Sbjct: 281 VPKEKSYREQITYVADRPGHDRRYAIDAEKIGRALGWKPQETFESGIRKTVEWYLSNTK 339
Score = 55 (24.4 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 18 KIFVAGHRGLVGSAIVRKLLS 38
KI V G G +GSA+VR +++
Sbjct: 2 KILVTGGAGFIGSAVVRHIIN 22
>ZFIN|ZDB-GENE-060421-6479 [details] [associations]
symbol:gale "UDP-galactose-4-epimerase"
species:7955 "Danio rerio" [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 ZFIN:ZDB-GENE-060421-6479 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GeneTree:ENSGT00530000063128
EMBL:CR391986 IPI:IPI00758807 Ensembl:ENSDART00000135569
ArrayExpress:F1Q5H4 Bgee:F1Q5H4 Uniprot:F1Q5H4
Length = 350
Score = 163 (62.4 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 73/296 (24%), Positives = 129/296 (43%)
Query: 41 FTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQ 100
F + + H ELDL + +E F Y ++ A + + + P + +NL
Sbjct: 55 FMDTQIEFH-ELDLLDKPGLEKIFKMHS-FYAVMHFAGLKAVGESVEQPLRYYRVNLTGT 112
Query: 101 TNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEW-YAIAKI----- 154
N+++ +GV+ L+F S+ +Y PI E + G P + Y I ++
Sbjct: 113 INLLEVMQSHGVRNLVFSSSATVYGDPQKLPIDEQHPVGGCTNPYGKTKYFIEEMIRDQC 172
Query: 155 AGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLP-----ALMRRFHEAKVNGA 209
K A ++Y FN I + G + P N +LP A+ RR H V G
Sbjct: 173 TAEKDWNAVLLRY-FNPIGAHISGQIGEDPQGIPNN--LLPYVAQVAIGRRKH-LNVFGN 228
Query: 210 KEVVVWGTGSPLREFLHVDDLAD---AVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKE 266
GTG +R+++HV DLA A V + + G + N+G+G S+ ++ +++
Sbjct: 229 DYSTPDGTG--VRDYIHVVDLAKGHIAAVRKLKDSCGCKVYNLGTGTGYSVLQMVSAMEK 286
Query: 267 AVGFEGELVWD-SSKPDGTPRKLMDSSKLAR--LGWRAKIELRDGLADTYKWYLEN 319
A G ++ + + + G + LA LGW+A+ +L D ++W +N
Sbjct: 287 ASG--RKIAYQIAPRRSGDVASCYADASLAEKELGWKAEFDLERMCEDLWRWQSQN 340
Score = 52 (23.4 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDV-ESFFAAEK 68
KI V G G +GS V +L+ GF +++ + + + DV ES EK
Sbjct: 4 KILVTGGGGYIGSHCVVELIEAGFHPVVIDNFSNA-VRGEGDVPESLRRIEK 54
>UNIPROTKB|Q9HTB6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:208964
"Pseudomonas aeruginosa PAO1" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 PseudoCAP:PA5454
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AE004091 GenomeReviews:AE004091_GR GO:GO:0033705 EMBL:AF009955
PIR:H82964 RefSeq:NP_254141.1 HSSP:P27830 ProteinModelPortal:Q9HTB6
SMR:Q9HTB6 GeneID:883037 KEGG:pae:PA5454 PATRIC:19845791
HOGENOM:HOG000167992 OMA:NLLEACA ProtClustDB:CLSK869364
Uniprot:Q9HTB6
Length = 304
Score = 174 (66.3 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 74/298 (24%), Positives = 124/298 (41%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAA 77
++FV G G VG + L + LL DL + + E P VI A
Sbjct: 4 RLFVTGLSGFVGKHLQAYLAAAHTPWALLPVPHRYDLLEPDSLGDLWP-ELPDAVIHLAG 62
Query: 78 KVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVK-KLLFLGSSCIYPKFAPQPIP-EN 135
+ A PA + INL N++ + G L++ S +Y + A +P
Sbjct: 63 QTYVPEAFRD-PARTLQINLLGTLNLLQALKARGFSGTFLYISSGDVYGQVAEAALPIHE 121
Query: 136 ALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLP 195
L+ P P YA++K+A +C + I + + P N GP ++S V+
Sbjct: 122 ELIPHPRNP----YAVSKLAAESLCLQWGITEGWRVLVARPFNHIGPGQ----KDSFVIA 173
Query: 196 ALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEV 255
+ R+ K + G R+FL V D+ A + ++ + NV SG+E
Sbjct: 174 SAARQIARMKQGLQANRLEVGDIDVSRDFLDVQDVLSAYLRLLSHGEAGAVYNVCSGQEQ 233
Query: 256 SIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARL----GWRAKIELRDGL 309
I+EL E + + E E+V D ++ ++ + S ARL GW+ +I ++ L
Sbjct: 234 KIRELIELLADIAQVELEIVQDPARMRRAEQRRVRGSH-ARLHDTTGWKPEITIKQSL 290
>UNIPROTKB|P26391 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0070404 "NADH binding" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
Gene3D:3.40.50.720 EMBL:AE006468 EMBL:X56793
GenomeReviews:AE006468_GR GO:GO:0009103 GO:GO:0070404 GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF PIR:S15299 RefSeq:NP_461042.1
PDB:1G1A PDB:1KEU PDB:1KEW PDBsum:1G1A PDBsum:1KEU PDBsum:1KEW
ProteinModelPortal:P26391 SMR:P26391 PRIDE:P26391 GeneID:1253618
KEGG:stm:STM2097 PATRIC:32382777 EvolutionaryTrace:P26391
Uniprot:P26391
Length = 361
Score = 161 (61.7 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 75/298 (25%), Positives = 136/298 (45%)
Query: 49 HAELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAF 108
HA D+ +++ F +P V+ AA+ + + T PA FI N+ +++ A
Sbjct: 56 HA--DICDSAEITRIFEQYQPDAVMHLAAE-SHVDRSITGPAAFIETNIVGTYALLEVAR 112
Query: 109 RY----GV-KKLLF----LGSSCIYPKFAPQPIPENALLTGPL--EPT----NEWYAIAK 153
+Y G KK F + + +Y P P +T PL E T + Y+ +K
Sbjct: 113 KYWSALGEDKKNNFRFHHISTDEVYGDL-PHPDEVENSVTLPLFTETTAYAPSSPYSASK 171
Query: 154 IAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFH-PENSHVLPALMRRFHEAKVNGAKEV 212
+ + +A++ Y I +N YGP +H PE ++P ++ E K +
Sbjct: 172 ASSDHLVRAWRRTYGLPTIVTNCSNNYGP---YHFPEK--LIPLVILNALEGK-----PL 221
Query: 213 VVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKE-------VSIKELA-EWV 264
++G G +R++L+V+D A A+ ++ E E N+G E +I +L E V
Sbjct: 222 PIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIV 281
Query: 265 KEAVGFEGELVWDSSKPDGTPRKLMDSSKLAR-LGWRAKIELRDGLADTYKWYLENVK 321
+A + ++ + + +P R +D+ K++R LGW+ G+ T +WYL N +
Sbjct: 282 PKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQ 339
Score = 53 (23.7 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 18 KIFVAGHRGLVGSAIVRKLL 37
KI + G G +GSA+VR ++
Sbjct: 2 KILITGGAGFIGSAVVRHII 21
>UNIPROTKB|P37777 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:623
"Shigella flexneri" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:X71970
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF EMBL:L14842 PIR:S41534
RefSeq:NP_707936.1 RefSeq:NP_837663.1 ProteinModelPortal:P37777
SMR:P37777 EnsemblBacteria:EBESCT00000086479
EnsemblBacteria:EBESCT00000092444 GeneID:1025931 GeneID:1078528
KEGG:sfl:SF2104 KEGG:sfx:S2227 PATRIC:18705961 Uniprot:P37777
Length = 361
Score = 159 (61.0 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 77/298 (25%), Positives = 137/298 (45%)
Query: 49 HAEL-DLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVI-DS 106
HA++ D S + FA +P V+ AA+ + + T PA FI N+ + T V+ ++
Sbjct: 56 HADICDAVAMSRI---FAQHQPDAVMHLAAE-SHVDRSITGPAAFIETNI-VGTYVLLEA 110
Query: 107 AFRY-----GVKKLLF----LGSSCIYPKFAPQPIPENALLTGPL--EPT----NEWYAI 151
A Y KK F + + +Y P P N PL E T + Y+
Sbjct: 111 ARNYWSALNDEKKKSFRFHHISTDEVYGDL-PHPDEANNNEALPLFTETTAYAPSSPYSA 169
Query: 152 AKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFH-PENSHVLPALMRRFHEAKVNGAK 210
+K + + +A++ Y I +N YGP +H PE ++P ++ E K
Sbjct: 170 SKASSDHLVRAWKRTYGLPTIVTNCSNNYGP---YHFPEK--LIPLVILNALEGKA---- 220
Query: 211 EVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKE-------VSIKELA-E 262
+ ++G G +R++L+V+D A A+ ++ E E N+G E ++I +L E
Sbjct: 221 -LPIYGKGDQIRDWLYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDLLDE 279
Query: 263 WVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLAR-LGWRAKIELRDGLADTYKWYLEN 319
V + + ++ + + +P R +D+ K++R LGW+ + G+ T +WYL N
Sbjct: 280 IVPKEKSYREQITYVADRPGHDRRYAIDADKISRELGWKPQETFESGIRKTVEWYLAN 337
Score = 55 (24.4 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 18 KIFVAGHRGLVGSAIVRKLLS 38
KI V G G +GSA+VR +++
Sbjct: 2 KILVTGGAGFIGSAVVRHIIN 22
>UNIPROTKB|F1PU61 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR021761
Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:AAEX03007410 Ensembl:ENSCAFT00000003315 Uniprot:F1PU61
Length = 414
Score = 176 (67.0 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 82/329 (24%), Positives = 132/329 (40%)
Query: 11 FLSEKSAK-IFVAGHRGLVGSAIVRKLLSLG---------FTNLLLRT-----HAELDLT 55
FLSEK K I + G G VGS + KL+ G FT H +L
Sbjct: 76 FLSEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELI 135
Query: 56 RQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKL 115
VE + Y + + A N P + + N N++ A R G + L
Sbjct: 136 NHDVVEPLYIEVDQIYHLASPASPPNYMYN---PIKTLKTNTIGTLNMLGLAKRVGAR-L 191
Query: 116 LFLGSSCIYPKFAPQPIPENALLTGPLEPTNE--WYAIAKIAGIKMCQAYQIQYKFNAIS 173
L +S +Y P+ P++ G + P Y K MC AY Q
Sbjct: 192 LLASTSEVYGD--PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRV 249
Query: 174 GMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADA 233
N +GP H + V+ F + G + + V+G+GS R F +V DL +
Sbjct: 250 ARIFNTFGPR--MHMNDGRVVS----NFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNG 302
Query: 234 VVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSK 293
+V +M+ + +N+G+ +E +I E A+ +K VG E+ + S D ++ D K
Sbjct: 303 LVALMNS-NVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIRK 361
Query: 294 LAR-LGWRAKIELRDGLADTYKWYLENVK 321
L W + L +GL ++ + ++
Sbjct: 362 AKMMLAWEPVVPLEEGLNKAIHYFRKELE 390
>TIGR_CMR|GSU_1815 [details] [associations]
symbol:GSU_1815 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 KO:K01710
HOGENOM:HOG000168004 OMA:LGHENFE RefSeq:NP_952865.1
ProteinModelPortal:Q74C60 GeneID:2686299 KEGG:gsu:GSU1815
PATRIC:22026487 ProtClustDB:CLSK828578
BioCyc:GSUL243231:GH27-1866-MONOMER Uniprot:Q74C60
Length = 311
Score = 172 (65.6 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 78/315 (24%), Positives = 130/315 (41%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFTNLLLR---THAELDLTRQSDVESFFAAEKPSYVIV 74
+I V G G +GS + +LL G L L T ++ ++ R D F + +
Sbjct: 2 RILVTGGAGFIGSHLCERLLEQGHDVLCLDNFFTGSKRNIDRLMDFHRFEVI-RHDIIEP 60
Query: 75 AAAKVGGIHANNTYPAEFIAINLQ----IQTNVIDSAFRYGVKK-----LLFLGSSCIYP 125
+V I+ N PA + I+T+V+ + G+ K +L +S +Y
Sbjct: 61 ILLEVDRIY-NLACPASPVHYQYNPVKTIKTSVMGTINMLGLAKRVRARILQASTSEVYG 119
Query: 126 KFAPQPIPENALLTGPLEPTN--EWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPN 183
P PE+ G + P Y K + Y Q + N YGP
Sbjct: 120 DPTIHPQPES--YWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRIARIFNTYGPR 177
Query: 184 DNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDG 243
H ++ F + G +++ V+G GS R F +VDDL D +V +M+
Sbjct: 178 MAEHDGR------VVSNFVVQALRG-EDLTVYGDGSQTRSFCYVDDLLDGLVTLMEHDQF 230
Query: 244 LEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLAR--LGWRA 301
+N+G+ +E I E A + G ++++ P PR+ LAR LGW
Sbjct: 231 CGPVNLGNPEETPIIEFARRIIAMTGSSSQIIY-RPLPSDDPRQRQPDITLARTILGWEP 289
Query: 302 KIELRDGLADTYKWY 316
++ L +GLA T +++
Sbjct: 290 RVSLDEGLAKTIEYF 304
>TAIR|locus:2202960 [details] [associations]
symbol:RHM1 "rhamnose biosynthesis 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA;IMP] [GO:0050377
"UDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=IDA] [GO:0010315 "auxin
efflux" evidence=IMP] [GO:0051555 "flavonol biosynthetic process"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009813 "flavonoid biosynthetic
process" evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010315 EMBL:AC007260
GO:GO:0051555 eggNOG:COG1091 GO:GO:0008831 GO:GO:0045226
EMBL:AY042833 EMBL:AY081471 IPI:IPI00543019 PIR:C96814
RefSeq:NP_177978.1 UniGene:At.198 UniGene:At.71030
ProteinModelPortal:Q9SYM5 SMR:Q9SYM5 IntAct:Q9SYM5 STRING:Q9SYM5
PaxDb:Q9SYM5 PRIDE:Q9SYM5 EnsemblPlants:AT1G78570.1 GeneID:844193
KEGG:ath:AT1G78570 TAIR:At1g78570 HOGENOM:HOG000167988
InParanoid:Q9SYM5 KO:K12450 OMA:IKFVDNR PhylomeDB:Q9SYM5
ProtClustDB:PLN02260 BioCyc:ARA:AT1G78570-MONOMER
BioCyc:MetaCyc:AT1G78570-MONOMER Genevestigator:Q9SYM5
GO:GO:0008460 GO:GO:0050377 GO:GO:0010280 GO:GO:0010253
TIGRFAMs:TIGR01181 Uniprot:Q9SYM5
Length = 669
Score = 177 (67.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 60/244 (24%), Positives = 117/244 (47%)
Query: 83 HANNTY--PAEFIAINLQIQTNVIDSAFRY-G-VKKLLFLGSSCIYPKFAPQPIPENALL 138
H +N++ EF N+ T+V+ A + G +++ + + + +Y + + N
Sbjct: 92 HVDNSFGNSFEFTKNNIY-GTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDALVGNHEA 150
Query: 139 TGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALM 198
+ L PTN Y+ K + AY Y I+ N+YGPN PE L+
Sbjct: 151 S-QLLPTNP-YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ--FPEK------LI 200
Query: 199 RRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHL-NVGSGKEVSI 257
+F + G + + + G GS +R +L+ +D+A+A ++ + + + H+ N+G+ KE +
Sbjct: 201 PKFILLAMRG-QVLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE-VGHVYNIGTKKERRV 258
Query: 258 KELAEWVKEAVGFEGE--LVWDSSKPDGTPRKLMDSSKLARLGWRAKIELRDGLADTYKW 315
++A+ + + + E + + ++P R +D KL +LGW + +GL T W
Sbjct: 259 NDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLKKLGWSERTTWEEGLKKTMDW 318
Query: 316 YLEN 319
Y +N
Sbjct: 319 YTQN 322
>UNIPROTKB|F1PI88 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
EMBL:AAEX03001747 RefSeq:XP_003638951.1 ProteinModelPortal:F1PI88
Ensembl:ENSCAFT00000020920 GeneID:100855555 KEGG:cfa:100855555
Uniprot:F1PI88
Length = 348
Score = 158 (60.7 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 75/287 (26%), Positives = 127/287 (44%)
Query: 51 ELDLTRQSDVESFFAAEKPSYV-IVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFR 109
E+D+ Q+ ++ F EK S+ ++ A + + + P ++ +NL +++
Sbjct: 64 EMDILDQAALQRLF--EKHSFTAVIHFAGLKAVGESVQKPLDYYRVNLTGSIQLLEIMRA 121
Query: 110 YGVKKLLFLGSSCIYPKFAPQPIP-ENALLTGPLEPTNEW----YAIAKIAGIKMCQAYQ 164
+GVK L+F S+ +Y PQ +P + A TG TN + Y I ++ +CQA +
Sbjct: 122 HGVKNLVFSSSATVYGN--PQYLPLDEAHPTGGC--TNPYGKSKYFIEEMIR-DLCQADK 176
Query: 165 ------IQYKFNAISGMPTNLYGPNDNFHPEN--SHVLPALMRRFHEAKVNGAKEVVVWG 216
++Y FN I + G + P N +V + R V G G
Sbjct: 177 AWNAVLLRY-FNPIGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREVLNVFGNDYDTEDG 235
Query: 217 TGSPLREFLHVDDLAD---AVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGE 273
TG +R+++HV DLA A + + E G N+G+G S+ ++ E +K+A G E
Sbjct: 236 TG--VRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVEAMKKASGQEIP 293
Query: 274 L-VWDSSKPDGTPRKLMDSSKLARLGWRAKIELRDGLADTYKWYLEN 319
V + D S L LGW A + L D ++W +N
Sbjct: 294 YKVVARREGDVAACYANPSLALKELGWTAVLGLDRMCEDLWRWQKQN 340
Score = 52 (23.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFTNLLL 46
K+ V G G +GS V +LL G++ +++
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPVVI 32
>UNIPROTKB|E9PLH9 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019835 "cytolysis" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0044237
EMBL:AC067930 HGNC:HGNC:12390 IPI:IPI00909958
ProteinModelPortal:E9PLH9 SMR:E9PLH9 Ensembl:ENST00000526290
ArrayExpress:E9PLH9 Bgee:E9PLH9 Uniprot:E9PLH9
Length = 119
Score = 153 (58.9 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 39/114 (34%), Positives = 63/114 (55%)
Query: 16 SAKIFVAGHRGLVGSAIVRKLLSLGF----TNLLLRTHAELDLTRQSDVESFFAAEKPSY 71
S +I V G GLVG AI +K+++ G + + + + DLT + + F +P++
Sbjct: 7 SMRILVTGGSGLVGKAI-QKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQPTH 65
Query: 72 VIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYP 125
VI AA VGG+ N Y +F N+ + NV+ SAF G +K++ S+CI+P
Sbjct: 66 VIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFP 119
>ZFIN|ZDB-GENE-020419-37 [details] [associations]
symbol:uxs1 "UDP-glucuronic acid decarboxylase 1"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
[GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
[GO:0030206 "chondroitin sulfate biosynthetic process"
evidence=IMP] [GO:0015012 "heparan sulfate proteoglycan
biosynthetic process" evidence=IGI;IMP] [GO:0030198 "extracellular
matrix organization" evidence=IGI;IMP] [GO:0050650 "chondroitin
sulfate proteoglycan biosynthetic process" evidence=IGI;IMP]
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 ZFIN:ZDB-GENE-020419-37 GO:GO:0016021
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030198 GO:GO:0032580 GO:GO:0051216 GO:GO:0001503
GO:GO:0015012 GO:GO:0030206 GeneTree:ENSGT00530000063128
EMBL:AF506235 EMBL:BC074058 IPI:IPI00494152 RefSeq:NP_775349.1
UniGene:Dr.79684 ProteinModelPortal:Q6GMI9 SMR:Q6GMI9 STRING:Q6GMI9
Ensembl:ENSDART00000078525 GeneID:192315 KEGG:dre:192315 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 InParanoid:Q6GMI9 KO:K08678
OrthoDB:EOG4ZW5B0 NextBio:20797152 ArrayExpress:Q6GMI9 Bgee:Q6GMI9
GO:GO:0048040 GO:GO:0033320 Uniprot:Q6GMI9
Length = 418
Score = 173 (66.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 82/324 (25%), Positives = 127/324 (39%)
Query: 11 FLSEKSAK-IFVAGHRGLVGSAIVRKLLSLG---------FTNLLLRT-----HAELDLT 55
FLSEK K I + G G VGS + KL+ G FT H +L
Sbjct: 80 FLSEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELI 139
Query: 56 RQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKL 115
VE + Y + + A N P + + N N++ A R G + L
Sbjct: 140 NHDVVEPLYIEVDQIYHLASPASPPNYMYN---PIKTLKTNTIGTLNMLGLAKRVGAR-L 195
Query: 116 LFLGSSCIYPKFAPQPIPENALLTGPLEPTNE--WYAIAKIAGIKMCQAYQIQYKFNAIS 173
L +S +Y P+ P+N G + P Y K MC AY Q
Sbjct: 196 LLASTSEVYGD--PEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRV 253
Query: 174 GMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADA 233
N +G H + V+ F + G + + V+G+GS R F +V DL +
Sbjct: 254 ARIFNTFG--SRMHMNDGRVVS----NFILQALQG-EALTVYGSGSQTRAFQYVSDLVNG 306
Query: 234 VVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSK 293
+V +M+ +N+G+ +E +I E A+ +K V + + D R+ D K
Sbjct: 307 LVSLMNSNIS-SPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRK 365
Query: 294 LARL-GWRAKIELRDGLADTYKWY 316
L GW + L +GL T +++
Sbjct: 366 AKLLLGWEPVVPLEEGLNKTIQYF 389
>DICTYBASE|DDB_G0275295 [details] [associations]
symbol:galE "UDP-glucose 4-epimerase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 dictyBase:DDB_G0275295
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0044237
eggNOG:COG1087 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P04397 OMA:ADKAWNA RefSeq:XP_643834.1
ProteinModelPortal:Q553X7 SMR:Q553X7 STRING:Q553X7
EnsemblProtists:DDB0231575 GeneID:8619881 KEGG:ddi:DDB_G0275295
ProtClustDB:CLSZ2729193 Uniprot:Q553X7
Length = 344
Score = 153 (58.9 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 70/281 (24%), Positives = 118/281 (41%)
Query: 52 LDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYG 111
+D+ + ++ F VI A + + +N P ++ N+ +++ ++
Sbjct: 62 VDIMNEKALDEIFETGNIRSVIHFAG-LKAVGESNKLPLKYYNNNIAGTLTLLNLMDKHR 120
Query: 112 VKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAK--IAGI--KMCQA----- 162
VKKL+F S+ +Y PI E+ PL TN Y K + GI +C +
Sbjct: 121 VKKLVFSSSATVYGDPHTVPITEDF----PLSATNP-YGRTKLYVEGILQDLCASDPEWN 175
Query: 163 -YQIQYKFNAISGMPTNLYGPNDNFHPEN--SHVLPALMRRFHEAKVNGAKEVVVWGTGS 219
++Y FN + P+ L G + P N +V + + + G GTG
Sbjct: 176 CIMLRY-FNPVGAHPSGLIGEDPKDIPNNLMPYVTQTAIGKRPILSIFGNDYNTPDGTG- 233
Query: 220 PLREFLHVDDLA----DAVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELV 275
+R+F+HV DLA A+ + + G N+G+G+ S+ E+ +K+A E
Sbjct: 234 -VRDFIHVVDLAKGHISALSSLHSKKQGCVAYNLGTGRGYSVLEMVGALKQASHKEIPYQ 292
Query: 276 WDSSKPDGTPRKLMDSSK-LARLGWRAKIELRDGLADTYKW 315
S + D SK L LGW+A D D +KW
Sbjct: 293 IVSRRKGDVASSFADPSKALKELGWKATHNQDDMCRDAWKW 333
Score = 57 (25.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAE 67
+I V G G +GS V +L+ G+T +++ + L VES E
Sbjct: 7 RIMVTGGAGYIGSHTVIELIEAGYTPVIVDNLSNSSLEAIKRVESITGKE 56
>UNIPROTKB|F1NWE5 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GO:GO:0019388
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AADN02043722
EMBL:AADN02043721 IPI:IPI00604262 Ensembl:ENSGALT00000006441
Uniprot:F1NWE5
Length = 351
Score = 163 (62.4 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 70/286 (24%), Positives = 130/286 (45%)
Query: 51 ELDLTRQSDVESFFAAEKPSYVI-VAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFR 109
ELD+T + + F+ + S V+ A K G P E+ +NL ++++
Sbjct: 68 ELDITDGAALRKLFSTHRFSGVMHFAGLKAVGESVRR--PLEYYNVNLTGTIRLLEAMEA 125
Query: 110 YGVKKLLFLGSSCIY--PKFAPQPIPENALLTGPLEPTNEW-YAIAKIAGIKMCQAYQ-- 164
Y V+ ++F S+ +Y P++ P + E + G P + Y I ++ +C+A +
Sbjct: 126 YSVRNIVFSSSATVYGDPQYLP--LDEKHPVGGCTNPYGKSKYFIEEMIQ-DLCKAEKGW 182
Query: 165 ----IQYKFNAISGMPTNLYGPNDNFHPEN--SHVLPALMRRFHEAKVNGAKEVVVWGTG 218
++Y FN I + + G + P N +V + R V G GTG
Sbjct: 183 NAILLRY-FNPIGAHESGMIGEDPQGIPNNLMPYVAQVAVGRQEFLSVFGNDYETADGTG 241
Query: 219 SPLREFLHVDDLAD---AVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELV 275
+R+++HV DLA A + + E G + N+G+G S+ ++ + +++A G E +
Sbjct: 242 --IRDYIHVVDLAKGHIAALKKLKENCGCKIYNLGTGTGYSVLQMVQAMEKASGREIKYK 299
Query: 276 WDSSKPDGTPRKLMDSSKLAR--LGWRAKIELRDGLADTYKWYLEN 319
+ + +G + +LA LGW+A L D ++W L+N
Sbjct: 300 I-TGRREGDVAACYANPELAERELGWKAAFGLDKMCEDLWRWQLQN 344
Score = 43 (20.2 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFTNLLL 46
+I V G G +GS V +L G+ +++
Sbjct: 8 RILVTGGAGYIGSHCVLQLAEAGYEPVVI 36
>WB|WBGene00015298 [details] [associations]
symbol:C01F1.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0040011 GeneTree:ENSGT00530000063128 KO:K12450 GO:GO:0008460
eggNOG:COG1088 OMA:TARMNNI PANTHER:PTHR10366:SF41 HSSP:P26391
EMBL:FO080258 PIR:T15370 RefSeq:NP_001040727.1
ProteinModelPortal:Q17556 SMR:Q17556 STRING:Q17556
World-2DPAGE:0020:Q17556 PaxDb:Q17556 EnsemblMetazoa:C01F1.3a
GeneID:173762 KEGG:cel:CELE_C01F1.3 UCSC:C01F1.3a CTD:173762
WormBase:C01F1.3a HOGENOM:HOG000017218 InParanoid:Q17556
NextBio:880983 ArrayExpress:Q17556 Uniprot:Q17556
Length = 631
Score = 173 (66.0 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 70/270 (25%), Positives = 116/270 (42%)
Query: 53 DLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYG- 111
D+ ++ + + F + VI AA N AE + N+ +++ YG
Sbjct: 65 DIKNEAAILNVFEQNEIDTVIHFAADCTSTRCYNE-TAEAVQNNVLSFIQFLETVRTYGK 123
Query: 112 VKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNA 171
+K+ + + + +Y + + L P N YA KIAG +AYQ QY
Sbjct: 124 IKRFVHISTDEVYGDSDLSENEQGKVEFSRLVPGNP-YAATKIAGEAYVRAYQTQYNLPI 182
Query: 172 ISGMPTNLYGPNDNFHPENSHVLPALMRRFHE-AKVNGAKEVVVWGTGSPLREFLHVDDL 230
++ N+YGPN + V+P RF E AKV G E + G+G LR +L VDD
Sbjct: 183 VTARMNNIYGPNQ----WDVKVVP----RFIEIAKVRG--EYTIQGSGKQLRSWLFVDDA 232
Query: 231 ADAVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTP----- 285
+ + + ++ + E N+G+ E ++ +LA+ ++E V + + K P
Sbjct: 233 SAGLKAVCEKGELHEIYNLGTYYEKNVADLAKTIQEEVDLQLGRAHEPPKYKSIPDRPYN 292
Query: 286 --RKLMDSSKLAR-LGWRAKIELRDGLADT 312
R L+ K LGW DG+ T
Sbjct: 293 DLRYLISIEKAKNDLGWEPTTSFDDGMRHT 322
>TIGR_CMR|GSU_2240 [details] [associations]
symbol:GSU_2240 "UDP-glucose 4-epimerase" species:243231
"Geobacter sulfurreducens PCA" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_953289.1 ProteinModelPortal:Q74AW0
GeneID:2687202 KEGG:gsu:GSU2240 PATRIC:22027335 OMA:VEHARQG
ProtClustDB:CLSK828777 BioCyc:GSUL243231:GH27-2212-MONOMER
Uniprot:Q74AW0
Length = 326
Score = 167 (63.8 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 71/308 (23%), Positives = 139/308 (45%)
Query: 30 SAIVRKLLSLGFTNLLLRTHAEL----DLTRQSDVESFFAAEKPSYVIVAAAKVGGIHAN 85
+ +V LS GF + L+ H E DL+ + +++ F S V+ AA + +
Sbjct: 26 TVVVYDNLSTGFPDALV--HGERLVTGDLSDTARLDALFVEYGFSTVLHFAASIIAPESV 83
Query: 86 NTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEP- 144
T P ++ N + N++ + ++GV++ +F ++ +Y + T P+ P
Sbjct: 84 -TAPLKYYGNNTRNTLNLLGACVKHGVERFIFSSTAAVYG-IPDSGVAAEESATVPINPY 141
Query: 145 -----TNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMR 199
+EW + + ++ ++Y FN P G PE +H++
Sbjct: 142 GTSKLMSEWM-LRDVCAAHGMRSVALRY-FNVAGADPQARMGQRT---PEATHLIKVSC- 195
Query: 200 RFHEAKVNGAKEVVVWGT------GSPLREFLHVDDLADAVVFMMDEYD-GLE--HLNVG 250
+A + +V ++GT G+ +R+++HV+DLA A + + + G E +NVG
Sbjct: 196 ---QAALGLRDKVCIFGTDYPTPDGTGIRDYIHVEDLASAHLAALSYLEKGGESTRINVG 252
Query: 251 SGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLAR--LGWRAKIE-LRD 307
G S++E+ + V+ G L ++ + G P L+ + AR LGW + + L
Sbjct: 253 YGSGSSVREVIDMVRRVSGVHF-LAEEAPRRPGDPPSLVARADRARTLLGWTPRYDNLET 311
Query: 308 GLADTYKW 315
+AD ++W
Sbjct: 312 IVADAWRW 319
Score = 112 (44.5 bits), Expect = 0.00089, P = 0.00089
Identities = 53/239 (22%), Positives = 105/239 (43%)
Query: 19 IFVAGHRGLVGSAIVRKLLSLGFTNLL---LRT-------HAEL----DLTRQSDVESFF 64
+ V G G +GS +VR+L G+T ++ L T H E DL+ + +++ F
Sbjct: 3 VLVTGGAGYIGSHVVRQLSEAGYTVVVYDNLSTGFPDALVHGERLVTGDLSDTARLDALF 62
Query: 65 AAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIY 124
S V+ AA + + T P ++ N + N++ + ++GV++ +F ++ +Y
Sbjct: 63 VEYGFSTVLHFAASIIAPESV-TAPLKYYGNNTRNTLNLLGACVKHGVERFIFSSTAAVY 121
Query: 125 PKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYK----FNAISGMPTNLY 180
+ T P+ P +++ +C A+ ++ FN P
Sbjct: 122 G-IPDSGVAAEESATVPINPYGTSKLMSEWMLRDVCAAHGMRSVALRYFNVAGADPQARM 180
Query: 181 GPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGT------GSPLREFLHVDDLADA 233
G PE +H++ +A + +V ++GT G+ +R+++HV+DLA A
Sbjct: 181 GQRT---PEATHLIKVSC----QAALGLRDKVCIFGTDYPTPDGTGIRDYIHVEDLASA 232
>DICTYBASE|DDB_G0279465 [details] [associations]
symbol:tgds "putative dTDP-D-glucose 4,6-dehydratase"
species:44689 "Dictyostelium discoideum" [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 dictyBase:DDB_G0279465 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:CM000152_GR GO:GO:0050662
GO:GO:0009225 EMBL:AAFI02000031 GO:GO:0008460 eggNOG:COG1088
HSSP:P27830 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
RefSeq:XP_641641.1 ProteinModelPortal:Q54WS6 STRING:Q54WS6
EnsemblProtists:DDB0231748 GeneID:8622047 KEGG:ddi:DDB_G0279465
ProtClustDB:CLSZ2430684 Uniprot:Q54WS6
Length = 434
Score = 136 (52.9 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 50/212 (23%), Positives = 98/212 (46%)
Query: 60 VESFFAAEKPSYVIVAAAKVGGIHANNTYPA--EFIAINLQIQTNVIDSAFRYGVKKLLF 117
+E+ F EK VI AA H +N++ +F N+ ++++ Y +KK ++
Sbjct: 75 LENIFEKEKIDIVIHLAAYT---HVDNSFKQSIKFTENNILGTHYLLETCKNYKLKKFIY 131
Query: 118 LGSSCIYPKFAPQP-------IPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFN 170
+ + +Y + I +++ L PTN Y+ +K + Q+Y +K
Sbjct: 132 VSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNP-YSASKAGAEHLVQSYYKSFKLP 190
Query: 171 AISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDL 230
I N+YGP +PE ++P +F +N K+ + GTG R +L++DD+
Sbjct: 191 VIITRANNIYGPKQ--YPEK--IIP----KFINLLLNN-KKCTIHGTGKNTRNYLYIDDI 241
Query: 231 ADAVVFMMDEYDGLEHLNVGSGKEVSIKELAE 262
A ++ + + N+G+ E+S ++A+
Sbjct: 242 VSAFDIILRKGEIGNVYNIGTDFEISNLDVAK 273
Score = 76 (31.8 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 280 KPDGTPRKLMDSSKLARLGWRAKIELRDGLADTYKWYLEN 319
+P R ++ SKL+ LGW+ I +G+ T+ WY N
Sbjct: 326 RPFNDHRYNINYSKLSNLGWKKSISWEEGIEKTFIWYKNN 365
>UNIPROTKB|P37761 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:485
"Neisseria gonorrhoeae" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PANTHER:PTHR10366:SF41 EMBL:Z32742 EMBL:Z21508
PIR:S47045 ProteinModelPortal:P37761 SMR:P37761 Uniprot:P37761
Length = 346
Score = 150 (57.9 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 70/291 (24%), Positives = 133/291 (45%)
Query: 51 ELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRY 110
++D+ +++++ FA +P V+ AA+ A + EFI N+ +++++A Y
Sbjct: 62 QVDICDRAELDRVFAQYRPDAVMHLAAESHVDRAIGS-AGEFIRTNIVGTFDLLEAARAY 120
Query: 111 -----GVKKLLF----LGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQ 161
K+ F + + +Y + T P P++ Y+ +K A + +
Sbjct: 121 WQQMPSEKREAFRFHHISTDEVYGDL--HGTDDLFTETTPYAPSSP-YSASKAAADHLVR 177
Query: 162 AYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPL 221
A+Q Y+ +I +N YGP PE ++P ++ ++G K + V+G G+ +
Sbjct: 178 AWQRTYRLPSIVSNCSNNYGPRQ--FPEK--LIPLMILN----ALSG-KPLPVYGDGAQI 228
Query: 222 REFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVS-----------IKELAEWVKEAVG- 269
R++L V+D A A+ ++ E E N+G E + ++ELA V
Sbjct: 229 RDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKTNLEVVKTICALLEELAPEKPAGVAR 288
Query: 270 FEGELVWDSSKPDGTPRKLMDSSKLAR-LGWRAKIELRDGLADTYKWYLEN 319
+E + + +P R +D++K+ R LGW GL T +WYL+N
Sbjct: 289 YEDLITFVQDRPGHDARYAVDAAKIRRDLGWLPLETFESGLRKTVQWYLDN 339
Score = 54 (24.1 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 13 SEKSAKIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELD-LTRQSDVESFF-AAEKPS 70
+E I V G G +GSA+VR ++ +++ LD LT ++ES A+ P
Sbjct: 3 TEGKKNILVTGGAGFIGSAVVRHIIQNTRDSVV-----NLDKLTYAGNLESLTDIADNPR 57
Query: 71 Y 71
Y
Sbjct: 58 Y 58
>TAIR|locus:2053275 [details] [associations]
symbol:UXS6 "UDP-XYL synthase 6" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC005727 HSSP:P27830 HOGENOM:HOG000168004 OMA:LGHENFE
ProtClustDB:CLSN2683686 EMBL:AY099703 EMBL:AY128899 IPI:IPI00536112
PIR:F84688 RefSeq:NP_001077972.1 RefSeq:NP_180443.1
RefSeq:NP_973555.1 UniGene:At.38572 ProteinModelPortal:Q9ZV36
SMR:Q9ZV36 STRING:Q9ZV36 PRIDE:Q9ZV36 EnsemblPlants:AT2G28760.1
EnsemblPlants:AT2G28760.2 EnsemblPlants:AT2G28760.3 GeneID:817426
KEGG:ath:AT2G28760 TAIR:At2g28760 InParanoid:Q9ZV36
PhylomeDB:Q9ZV36 ArrayExpress:Q9ZV36 Genevestigator:Q9ZV36
Uniprot:Q9ZV36
Length = 343
Score = 164 (62.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 78/314 (24%), Positives = 127/314 (40%)
Query: 14 EKSAKIFVAGHRGLVGSAIVRKLLS-------------LGFTNLLLRT--HAELDLTRQS 58
+ + +I V G G +GS +V KL+ G + L + H +L R
Sbjct: 28 QSNMRILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 87
Query: 59 DVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFL 118
E F Y + A N P + I N+ N++ A R G + +L
Sbjct: 88 VTEPLFVEVDQIYHLACPASPIFYKYN---PVKTIKTNVIGTLNMLGLAKRVGAR-ILLT 143
Query: 119 GSSCIYPKFAPQPIPENALLTGPLEP--TNEWYAIAKIAGIKMCQAYQIQYKFNAISGMP 176
+S +Y P P+ G + P Y K + Y Q+
Sbjct: 144 STSEVYGD--PLVHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 201
Query: 177 TNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVF 236
N YGP N ++ V+ F + G + + V G+ R F +V D+ + ++
Sbjct: 202 FNTYGPRMNI--DDGRVVS----NFIAQALRG-EALTVQKPGTQTRSFCYVSDMVEGLMR 254
Query: 237 MMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLAR 296
+M E D +N+G+ E ++ ELAE VKE + + E+ + PD ++ D SK
Sbjct: 255 LM-EGDQTGPINIGNPGEFTMVELAETVKELIKPDVEIKMVENTPDDPRQRKPDISKAKE 313
Query: 297 -LGWRAKIELRDGL 309
LGW K++LR+GL
Sbjct: 314 VLGWEPKVKLREGL 327
>UNIPROTKB|P55293 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:562
"Escherichia coli" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AF125322
GO:GO:0009103 GO:GO:0045226 GO:GO:0009243 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
PANTHER:PTHR10366:SF41 PIR:S78542 ProteinModelPortal:P55293
SMR:P55293 PRIDE:P55293 SABIO-RK:P55293 Uniprot:P55293
Length = 361
Score = 149 (57.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 70/283 (24%), Positives = 130/283 (45%)
Query: 63 FFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVI-DSAFRY--GV---KKLL 116
+F + V+ AA+ + + T PA FI N+ + T V+ ++A Y G+ KK
Sbjct: 68 YFGQHQLDAVMHLAAE-SHVDRSITGPAAFIETNI-VGTYVLLEAARNYWSGLDDEKKKN 125
Query: 117 F----LGSSCIYPKFA-PQPIPENALL-----TGPLEPTNEWYAIAKIAGIKMCQAYQIQ 166
F + + +Y P + N L T P++ Y+ +K + + +A++
Sbjct: 126 FRFHHISTDEVYGDLPHPDEVNSNETLQLFTETTAYAPSSP-YSASKASSDHLVRAWKRT 184
Query: 167 YKFNAISGMPTNLYGPNDNFH-PENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFL 225
Y I +N YGP +H PE ++P ++ E K + ++G G +R++L
Sbjct: 185 YGLPTIVSNCSNNYGP---YHFPEK--LIPLVILNALEGKA-----LPIYGKGDQIRDWL 234
Query: 226 HVDDLADAVVFMMDEYDGLEHLNVGSGKE-------VSIKELA-EWVKEAVGFEGELVWD 277
+V+D A A+ ++ E E N+G E +I +L E V + + ++ +
Sbjct: 235 YVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVFTICDLLDEIVPKEKSYREQITYV 294
Query: 278 SSKPDGTPRKLMDSSKLAR-LGWRAKIELRDGLADTYKWYLEN 319
+ +P R +D+ K++R LGW+ + G+ T +WYL N
Sbjct: 295 ADRPGHDRRYAIDADKISRELGWKPQETFESGIRKTVEWYLAN 337
Score = 55 (24.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 18 KIFVAGHRGLVGSAIVRKLLS 38
KI V G G +GSA+VR +++
Sbjct: 2 KILVTGGAGFIGSAVVRHIIN 22
>FB|FBgn0035848 [details] [associations]
symbol:CG7979 species:7227 "Drosophila melanogaster"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K08678 OMA:LGHENFE
EMBL:AY051913 RefSeq:NP_648182.1 UniGene:Dm.20044 HSSP:P93031
SMR:Q9VSE8 STRING:Q9VSE8 EnsemblMetazoa:FBtr0076690 GeneID:38911
KEGG:dme:Dmel_CG7979 UCSC:CG7979-RA FlyBase:FBgn0035848
InParanoid:Q9VSE8 OrthoDB:EOG45HQCS GenomeRNAi:38911 NextBio:810971
Uniprot:Q9VSE8
Length = 441
Score = 166 (63.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 81/323 (25%), Positives = 126/323 (39%)
Query: 11 FLSEKSAK-IFVAGHRGLVGSAIVRKLLSLG---------FTNLLLRT-----HAELDLT 55
+L+ K+ K I + G G VGS +V L+ G FT H +L
Sbjct: 109 YLNYKNRKRILITGGAGFVGSHLVDDLMVQGHEVIVVDNFFTGRKRNVEHWLGHENFELI 168
Query: 56 RQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKL 115
V F Y + + A N P + I N NV+ A R + K+
Sbjct: 169 HHDIVNPLFIEIDEIYHLASPASPPHYMYN---PVKTIKTNTMGTINVLGLAKRV-MAKV 224
Query: 116 LFLGSSCIYPKFAPQPIPENAL-LTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISG 174
L +S +Y P PE P+ P Y K + AY Q K
Sbjct: 225 LIASTSEVYGDPTVHPQPETYWGHVNPIGP-RACYDEGKRVSETLSYAYAKQEKVQVRVA 283
Query: 175 MPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAV 234
N YGP H + V+ + +A N + + V+G G R F +V DL D +
Sbjct: 284 RIFNTYGPR--MHMNDGRVVSNFIL---QALRN--ETITVYGNGKQTRSFQYVSDLVDGM 336
Query: 235 VFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKL 294
+ +M + + +N+G+ E +I E AE +K+ VG + + D R+ D ++
Sbjct: 337 IALMAS-NYTQPVNLGNPVEQTIGEFAEIIKKLVGGPSVIKQSKAMEDDPQRRKPDITRA 395
Query: 295 ARL-GWRAKIELRDGLADTYKWY 316
+L W K+ L GL T ++
Sbjct: 396 RQLLHWEPKVPLETGLQRTISYF 418
>TAIR|locus:2138121 [details] [associations]
symbol:UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AL078468 EMBL:AL161560 KO:K01784 GO:GO:0042546
ProtClustDB:PLN02240 EMBL:BT008539 IPI:IPI00516246 PIR:T08911
RefSeq:NP_194123.1 UniGene:At.3390 ProteinModelPortal:Q9T0A7
SMR:Q9T0A7 IntAct:Q9T0A7 STRING:Q9T0A7 PaxDb:Q9T0A7 PRIDE:Q9T0A7
EnsemblPlants:AT4G23920.1 GeneID:828492 KEGG:ath:AT4G23920
TAIR:At4g23920 InParanoid:Q9T0A7 OMA:THAPIDA PhylomeDB:Q9T0A7
Genevestigator:Q9T0A7 GermOnline:AT4G23920 Uniprot:Q9T0A7
Length = 350
Score = 156 (60.0 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 76/308 (24%), Positives = 127/308 (41%)
Query: 33 VRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVI-VAAAKVGGIHANNTYPAE 91
V+KL G L H ++DL + +E F+ K VI A K G P
Sbjct: 46 VKKLA--GENGNRLSFH-QVDLRDRPALEKIFSETKFDAVIHFAGLKAVGESVEK--PLL 100
Query: 92 FIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAI 151
+ N+ +++ +YG K L+F S+ +Y P+ +P P+ TN Y
Sbjct: 101 YYNNNIVGTVTLLEVMAQYGCKNLVFSSSATVYGW--PKEVP--CTEESPISATNP-YGR 155
Query: 152 AKIAGIKMCQAYQ---IQYK------FNAISGMPTNLYGPNDNFHPENSHVLPALMRRFH 202
K+ ++C+ ++K FN + P+ G + P N LM
Sbjct: 156 TKLFIEEICRDVHRSDSEWKIILLRYFNPVGAHPSGYIGEDPLGVPNN------LMPYVQ 209
Query: 203 EAKVNGAKEVVVWGT------GSPLREFLHVDDLADAVVFMMDEYDGL----EHLNVGSG 252
+ V + V+GT G+ +R+++HV DLAD + + + D L E N+G+G
Sbjct: 210 QVAVGRRPHLTVFGTDYKTKDGTGVRDYIHVMDLADGHIAALRKLDDLKISCEVYNLGTG 269
Query: 253 KEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLAR-LGWRAKIELRDGLAD 311
S+ E+ ++A G + LV +P + K R L W+AK + + D
Sbjct: 270 NGTSVLEMVAAFEKASGKKIPLVMAGRRPGDAEVVYASTEKAERELNWKAKNGIEEMCRD 329
Query: 312 TYKWYLEN 319
+ W N
Sbjct: 330 LWNWASNN 337
Score = 43 (20.2 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 19 IFVAGHRGLVGSAIVRKLLSLGFTNLLL 46
+ V G G +GS V +LL G++ +++
Sbjct: 5 VLVTGGAGYIGSHTVLQLLEGGYSAVVV 32
>TAIR|locus:2078206 [details] [associations]
symbol:UXS5 "UDP-XYL synthase 5" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;TAS] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
EMBL:AL133298 HSSP:P27830 HOGENOM:HOG000168004 EMBL:AY072098
EMBL:AY096586 EMBL:AY087118 EMBL:AK228600 EMBL:AK317497
IPI:IPI00534151 PIR:T45701 RefSeq:NP_001030820.1 RefSeq:NP_190228.1
UniGene:At.43598 ProteinModelPortal:Q9SN95 SMR:Q9SN95 STRING:Q9SN95
PRIDE:Q9SN95 EnsemblPlants:AT3G46440.1 EnsemblPlants:AT3G46440.2
GeneID:823794 KEGG:ath:AT3G46440 TAIR:At3g46440 InParanoid:Q9SN95
OMA:QISTQNR PhylomeDB:Q9SN95 ProtClustDB:CLSN2683686
ArrayExpress:Q9SN95 Genevestigator:Q9SN95 Uniprot:Q9SN95
Length = 341
Score = 161 (61.7 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 77/314 (24%), Positives = 127/314 (40%)
Query: 14 EKSAKIFVAGHRGLVGSAIVRKLLS-------------LGFTNLLLRT--HAELDLTRQS 58
+ + +I ++G G +GS +V KL+ G + L + H +L R
Sbjct: 26 QSNMRILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHD 85
Query: 59 DVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFL 118
E Y + A N P + I N+ N++ A R G + +L
Sbjct: 86 VTEPLLIEVDQIYHLACPASPIFYKYN---PVKTIKTNVIGTLNMLGLAKRVGAR-ILLT 141
Query: 119 GSSCIYPKFAPQPIPENALLTGPLEP--TNEWYAIAKIAGIKMCQAYQIQYKFNAISGMP 176
+S +Y P PE+ G + P Y K + Y Q+
Sbjct: 142 STSEVYGDPLIHPQPES--YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 199
Query: 177 TNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVF 236
N YGP N ++ V+ F + G + + V G+ R F +V D+ D ++
Sbjct: 200 FNTYGPRMNI--DDGRVVS----NFIAQALRG-EALTVQKPGTQTRSFCYVSDMVDGLMR 252
Query: 237 MMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLAR 296
+M E D +N+G+ E ++ ELAE VKE + E+ + PD ++ D +K
Sbjct: 253 LM-EGDDTGPINIGNPGEFTMVELAETVKELINPSIEIKMVENTPDDPRQRKPDITKAKE 311
Query: 297 -LGWRAKIELRDGL 309
LGW K++LR+GL
Sbjct: 312 VLGWEPKVKLREGL 325
>TIGR_CMR|BA_5505 [details] [associations]
symbol:BA_5505 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000168001
OMA:SHPNGYN GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:NP_847665.1 RefSeq:YP_022172.1 RefSeq:YP_031353.1 PDB:2C20
PDBsum:2C20 ProteinModelPortal:Q81K34 SMR:Q81K34 DNASU:1085150
EnsemblBacteria:EBBACT00000011015 EnsemblBacteria:EBBACT00000018769
EnsemblBacteria:EBBACT00000021224 GeneID:1085150 GeneID:2819098
GeneID:2850681 KEGG:ban:BA_5505 KEGG:bar:GBAA_5505 KEGG:bat:BAS5114
ProtClustDB:CLSK917664 BioCyc:BANT260799:GJAJ-5189-MONOMER
BioCyc:BANT261594:GJ7F-5367-MONOMER EvolutionaryTrace:Q81K34
Uniprot:Q81K34
Length = 330
Score = 160 (61.4 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 79/301 (26%), Positives = 142/301 (47%)
Query: 41 FTNLLLRTHAEL-DLTRQSDVESF--FAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINL 97
F N LR A L D+ Q ++E+ FAA+ S V V+ K + NN Y A +
Sbjct: 48 FYNGDLRDKAFLRDVFTQENIEAVMHFAAD--SLVGVSMEKPLQYYNNNVYGALCLL--- 102
Query: 98 QIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGI 157
V+D + V K +F ++ Y + I E + PTN Y K+A
Sbjct: 103 ----EVMDE---FKVDKFIFSSTAATYGEVDVDLITEETMTN----PTNT-YGETKLAIE 150
Query: 158 KMC----QAYQIQYK----FNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGA 209
KM QA ++YK FN P + G ++ PE +H++P ++ + +
Sbjct: 151 KMLHWYSQASNLRYKIFRYFNVAGATPNGIIG--EDHRPE-THLIPLVL----QVALGQR 203
Query: 210 KEVVVWGT------GSPLREFLHVDDLADA-VVFMMDEYDGLEH--LNVGSGKEVSIKEL 260
++++++G G+ +R+++HV+DL A + + D +G E N+G+G S+KE+
Sbjct: 204 EKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEI 263
Query: 261 AEWVKEAVGFE--GELVWDSSKPDGTPRKLMDSSKLAR--LGWRAK-IELRDGLADTYKW 315
+ V+E E E+ + + G P +L+ SS+ A+ LGW + + ++ + + W
Sbjct: 264 VDAVREVTNHEIPAEV---APRRAGDPARLVASSQKAKEKLGWDPRYVNVKTIIEHAWNW 320
Query: 316 Y 316
+
Sbjct: 321 H 321
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 75/320 (23%), Positives = 137/320 (42%)
Query: 19 IFVAGHRGLVGSAIVRKLLSLGFTNLL---LRT-HAEL----------DLTRQSDVESFF 64
I + G G +GS V+KL+ G + ++ L+T H + DL ++ + F
Sbjct: 4 ILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVF 63
Query: 65 AAEKPSYVI-VAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCI 123
E V+ AA + G+ P ++ N+ +++ + V K +F ++
Sbjct: 64 TQENIEAVMHFAADSLVGVSMEK--PLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAAT 121
Query: 124 YPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMC----QAYQIQYK----FNAISGM 175
Y + I E + PTN Y K+A KM QA ++YK FN
Sbjct: 122 YGEVDVDLITEETMTN----PTNT-YGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGAT 176
Query: 176 PTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGT------GSPLREFLHVDD 229
P + G ++ PE +H++P ++ + + ++++++G G+ +R+++HV+D
Sbjct: 177 PNGIIG--EDHRPE-THLIPLVL----QVALGQREKIMMFGDDYNTPDGTCIRDYIHVED 229
Query: 230 LADAVVFMMDEYDGLEHLNVGSGKEVSIKELAEW----VKEAVGFEGELVWDSSKPDGTP 285
L A F+ GL+ L +G E L VKE V E+ + P
Sbjct: 230 LV-AAHFL-----GLKDLQ--NGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAP 281
Query: 286 RKLMDSSKLARLGWRAKIEL 305
R+ D ++L +AK +L
Sbjct: 282 RRAGDPARLVASSQKAKEKL 301
>TAIR|locus:2168539 [details] [associations]
symbol:UXS3 "UDP-glucuronic acid decarboxylase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;IDA] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
GO:GO:0048040 IPI:IPI00846930 RefSeq:NP_001078768.1
UniGene:At.24136 ProteinModelPortal:F4KHU8 SMR:F4KHU8 PRIDE:F4KHU8
EnsemblPlants:AT5G59290.2 GeneID:836047 KEGG:ath:AT5G59290
OMA:EINMVEN ArrayExpress:F4KHU8 Uniprot:F4KHU8
Length = 357
Score = 160 (61.4 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 79/314 (25%), Positives = 127/314 (40%)
Query: 14 EKSAKIFVAGHRGLVGSAIVRKLLSLG----------FT----NLLLRT-HAELDLTRQS 58
+ + +I ++G G +GS +V KL+ FT NL H +L R
Sbjct: 42 QPNMRILISGGAGFIGSHLVDKLMENEKNEVVVADNYFTGSKENLKKWIGHPRFELIRHD 101
Query: 59 DVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFL 118
E Y + A N P + I N+ N++ A R G + +L
Sbjct: 102 VTEPLLIEVDRIYHLACPASPIFYKYN---PVKTIKTNVIGTLNMLGLAKRVGAR-ILLT 157
Query: 119 GSSCIYPKFAPQPIPENALLTGPLEP--TNEWYAIAKIAGIKMCQAYQIQYKFNAISGMP 176
+S +Y P PE+ G + P Y K + Y Q+
Sbjct: 158 STSEVYGDPLIHPQPES--YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 215
Query: 177 TNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVF 236
N YGP N ++ V+ F + G + + V G+ R F +V D+ D ++
Sbjct: 216 FNTYGPRMNI--DDGRVVS----NFIAQALRG-EALTVQKPGTQTRSFCYVSDMVDGLIR 268
Query: 237 MMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLAR 296
+M+ D +N+G+ E ++ ELAE VKE + E+ + PD ++ D SK
Sbjct: 269 LMEGND-TGPINIGNPGEFTMVELAETVKELINPSIEIKMVENTPDDPRQRKPDISKAKE 327
Query: 297 -LGWRAKIELRDGL 309
LGW K++LR+GL
Sbjct: 328 VLGWEPKVKLREGL 341
>TIGR_CMR|CJE_1273 [details] [associations]
symbol:CJE_1273 "UDP-glucose 4-epimerase" species:195099
"Campylobacter jejuni RM1221" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0044237
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 RefSeq:YP_179261.1
ProteinModelPortal:Q5HTX4 STRING:Q5HTX4 GeneID:3231780
KEGG:cjr:CJE1273 PATRIC:20044342 OMA:MMSERIL ProtClustDB:CLSK879103
BioCyc:CJEJ195099:GJC0-1299-MONOMER Uniprot:Q5HTX4
Length = 328
Score = 154 (59.3 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 68/269 (25%), Positives = 124/269 (46%)
Query: 51 ELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRY 110
E DL+ V++ F EK ++ AA + + + P ++ N TN+I++ +
Sbjct: 54 EQDLSDFQGVKALFEREKFDAIVHFAASIE-VFESMQNPLKYYMNNTVNTTNLIETCLQT 112
Query: 111 GVKKLLFLGSSCIYPKFAPQ-PIPENALLTGPLEPTNEWYAIAKIAGIKMCQ-AYQIQYK 168
GV K +F ++ Y + PQ P+ T PL P N Y +K+ ++ + A +
Sbjct: 113 GVNKFIFSSTAATYGE--PQTPVVSE---TSPLAPINP-YGRSKLMSEEVLRDASMANPE 166
Query: 169 FNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKE-VVVWGT------GSPL 221
F N+ G ++ + L+ + G ++ + ++G G+ +
Sbjct: 167 FKHCILRYFNVAGACMDYTLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDYDTKDGTCI 226
Query: 222 REFLHVDDLADAVVFMMDEYDGLEH--LNVGSGKEVSIKELAEWVKEAVG--FEGELVWD 277
R+F+HVDD++ A + +D E NVG G S+KE+ E +K+ G F+ EL
Sbjct: 227 RDFIHVDDISSAHLATLDYLQENESNVFNVGYGHGFSVKEVIEAMKKVSGVDFKVEL--- 283
Query: 278 SSKPDGTPRKLM-DSSKLARL-GWRAKIE 304
+ + G P L+ D+SK+ L W+ K +
Sbjct: 284 APRRAGDPSVLISDASKIRNLTSWQPKYD 312
Score = 42 (19.8 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 18 KIFVAGHRGLVGSAIVRKLL 37
KI ++G G +GS +R+ L
Sbjct: 2 KILISGGAGYIGSHTLRQFL 21
>UNIPROTKB|P44914 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase" species:71421
"Haemophilus influenzae Rd KW20" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:L42023
GenomeReviews:L42023_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 PIR:C64099 RefSeq:NP_439034.2
ProteinModelPortal:P44914 SMR:P44914 GeneID:949510 KEGG:hin:HI0873
PATRIC:20190401 OMA:AKKAFRF ProtClustDB:CLSK824762 Uniprot:P44914
Length = 338
Score = 150 (57.9 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 68/292 (23%), Positives = 128/292 (43%)
Query: 51 ELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRY 110
++D+ + +E+ F +P V+ AA+ + + + A+F+ N+ +++ A Y
Sbjct: 57 KVDICDLNVIENIFEKYQPDAVMHLAAE-SHVDRSISGAADFVQTNIVGTYTLLEVAKNY 115
Query: 111 G-----VKKLLF----LGSSCIYPKFAPQPIPENALLT-GPLEPTNEWYAIAKIAGIKMC 160
KK F + + +Y + + E A P P++ Y+ +K A +
Sbjct: 116 WHTLDEAKKTTFRFHHISTDEVYGDLS---LSEPAFTEQSPYHPSSP-YSASKAASNHLV 171
Query: 161 QAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSP 220
QA+ Y I +N YG H E ++P ++ V G K + ++G G
Sbjct: 172 QAWHRTYGLPVIITNSSNNYGAYQ--HAEK--LIPLMISN----AVMG-KPLPIYGDGQQ 222
Query: 221 LREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVS----IKELAEWVKEAVG------- 269
+R++L V+D A ++ + E+ N+G E + +K + + ++E
Sbjct: 223 IRDWLFVEDHVQASYLVLTKGRVGENYNIGGNCEKTNLEVVKRICQLLEELAPSKPNHIK 282
Query: 270 -FEGELVWDSSKPDGTPRKLMDSSKL-ARLGWRAKIELRDGLADTYKWYLEN 319
+E + + +P R +D SK+ A LGW+ +I GL T KWYL N
Sbjct: 283 YYEDLMTFVKDRPGHDVRYSLDCSKIHAELGWQPQITFEQGLRQTVKWYLFN 334
Score = 47 (21.6 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 19 IFVAGHRGLVGSAIVRKLLS 38
I V G G +GSA++R +++
Sbjct: 4 ILVTGGSGFIGSALIRYIIN 23
>UNIPROTKB|Q9S642 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122587
"Neisseria meningitidis Z2491" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
OMA:RAYRQQM EMBL:AL157959 GenomeReviews:AL157959_GR GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
EMBL:AF083467 PIR:G82014 RefSeq:YP_002341735.1
RefSeq:YP_002341747.1 ProteinModelPortal:Q9S642 SMR:Q9S642
EnsemblBacteria:EBNEIT00000000158 EnsemblBacteria:EBNEIT00000001121
GeneID:906204 GeneID:906218 KEGG:nma:NMA0189 KEGG:nma:NMA0204
PATRIC:20360960 ProtClustDB:CLSK877380
BioCyc:NMEN122587:GI3Q-220-MONOMER
BioCyc:NMEN122587:GI3Q-233-MONOMER Uniprot:Q9S642
Length = 341
Score = 143 (55.4 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 69/292 (23%), Positives = 132/292 (45%)
Query: 51 ELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRY 110
++D+ +++++ FA +P V+ AA+ + + EFI N+ N++++A Y
Sbjct: 57 QVDICDRAELDRVFAQHRPDAVMHLAAE-SHVDRSIGSAGEFIQTNIVGTFNLLEAARAY 115
Query: 111 -----GVKKLLF----LGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQ 161
K F + + +Y + + T P P++ Y+ +K + + +
Sbjct: 116 RQQMPSEKHEAFRFHHISTDEVYGDLSGTD--DLFTETAPYAPSSP-YSASKASSDHLVR 172
Query: 162 AYQIQYKFNAISGMPTNLYGPNDNFH-PENSHVLPALMRRFHEAKVNGAKEVVVWGTGSP 220
A+ Y I +N YGP +H PE ++P ++ ++G K + V+G G
Sbjct: 173 AWLRTYGLPTIVTNCSNNYGP---YHFPEK--LIPLMILN----ALDG-KPLPVYGDGMQ 222
Query: 221 LREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVS-----------IKELAEWVKEAVG 269
+R++L V+D A A+ ++ E E N+G E + ++ELA V
Sbjct: 223 IRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVA 282
Query: 270 -FEGELVWDSSKPDGTPRKLMDSSKLAR-LGWRAKIELRDGLADTYKWYLEN 319
+E + + +P R +D++K+ R LGW+ GL T +WYL+N
Sbjct: 283 RYEDLITFVQDRPGHDARYAVDTAKIRRDLGWQPLETFESGLRKTVQWYLDN 334
Score = 55 (24.4 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELD-LTRQSDVESFF-AAEKPSY 71
KI V G G +GSA+VR ++ +++ LD LT ++ES A+ P Y
Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVV-----NLDKLTYAGNLESLTDIADNPRY 53
>UNIPROTKB|Q0BYW6 [details] [associations]
symbol:HNE_2639 "UDP-glucuronate 5'-epimerase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0050379
"UDP-glucuronate 5'-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009103 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000168000 KO:K08679 GO:GO:0050379 RefSeq:YP_761327.1
ProteinModelPortal:Q0BYW6 STRING:Q0BYW6 GeneID:4289771
KEGG:hne:HNE_2639 PATRIC:32218139 OMA:NSAYSAN
BioCyc:HNEP228405:GI69-2655-MONOMER Uniprot:Q0BYW6
Length = 334
Score = 148 (57.2 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 67/279 (24%), Positives = 118/279 (42%)
Query: 60 VESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLG 119
+E+ F + P V+ AA+ G + + +P +FI N+ N+ID + R+G + L+
Sbjct: 68 MEAVFQRDTPEMVLHFAAQAG-VRYSLDHPRDFIDANIVGSFNIIDLSRRHGTQHLVMAS 126
Query: 120 SSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNL 179
+S Y A Q P + P T YA K+A + ++ Y ++
Sbjct: 127 TSSAYG--ANQKFPFEERDSAPYPLTI--YAATKLASELIAHSHAHLYGVPTTVLRFFSV 182
Query: 180 YGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMD 239
YGP P+ + L F + K+ + + V+ G LR+F ++DDL +A+ +MD
Sbjct: 183 YGPWGR--PDMAFFL------FTD-KIFKGQPIDVFNHGDLLRDFTYIDDLVEAIRRLMD 233
Query: 240 ----------EYDGLEHL------NVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDG 283
D L + N+G+ V + + E ++ A+G + E +P
Sbjct: 234 TPPVVGNHIIRGDSLSPVAPYRLVNIGNASPVRLMDYIEAIEGAIGRKAEKNMIDMQPGD 293
Query: 284 TPRKLMDSSKLARL-GWRAKIELRDGLADTYKWYLENVK 321
+ D L L G+ + R G+A WY + K
Sbjct: 294 VKQTFADVRLLDALTGYTPDTDYRTGIARFVDWYRDYFK 332
Score = 46 (21.3 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLG 40
KI V G G +GS + +LL G
Sbjct: 2 KILVTGAAGFIGSEMALRLLKEG 24
>CGD|CAL0000450 [details] [associations]
symbol:GAL102 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 155 (59.6 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 63/262 (24%), Positives = 115/262 (43%)
Query: 52 LDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDS-AFRY 110
LDL+ ++E K + I+ A + + P F N+ N+++
Sbjct: 64 LDLS--DNLEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLECHRLNP 121
Query: 111 GVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFN 170
+ L + + +Y ENA++ PTN Y+ +K A + ++YQ YK
Sbjct: 122 SIGYFLHISTDEVYGDVYEGDNKENAVMN----PTNP-YSASKAAIDLIIKSYQYSYKLP 176
Query: 171 AISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDL 230
P N+YGP +PE ++P ++ +N K + V G G+ R++L+V D+
Sbjct: 177 ITILRPNNVYGPLQ--YPEK--IIPLTIQC-----INEKKPIPVHGKGTNKRKYLYVLDI 227
Query: 231 ADAV--VFMMDEYDGLEHL-NVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRK 287
A+ V++ + + + N+G E+ L + + E G GE+ + +
Sbjct: 228 VLAIETVWIKNPMTTVNQIYNIGGTDELDNLSLIKLIMEIFG-RGEIQFIKDRNYNDTNY 286
Query: 288 LMDSSKLARLGWRAKIELRDGL 309
+D++K+ LGW KI L GL
Sbjct: 287 SIDTTKIHNLGWSPKISLVQGL 308
>UNIPROTKB|Q59VY4 [details] [associations]
symbol:TGD99 "Putative uncharacterized protein TGD99"
species:237561 "Candida albicans SC5314" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 155 (59.6 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 63/262 (24%), Positives = 115/262 (43%)
Query: 52 LDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDS-AFRY 110
LDL+ ++E K + I+ A + + P F N+ N+++
Sbjct: 64 LDLS--DNLEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLECHRLNP 121
Query: 111 GVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFN 170
+ L + + +Y ENA++ PTN Y+ +K A + ++YQ YK
Sbjct: 122 SIGYFLHISTDEVYGDVYEGDNKENAVMN----PTNP-YSASKAAIDLIIKSYQYSYKLP 176
Query: 171 AISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDL 230
P N+YGP +PE ++P ++ +N K + V G G+ R++L+V D+
Sbjct: 177 ITILRPNNVYGPLQ--YPEK--IIPLTIQC-----INEKKPIPVHGKGTNKRKYLYVLDI 227
Query: 231 ADAV--VFMMDEYDGLEHL-NVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRK 287
A+ V++ + + + N+G E+ L + + E G GE+ + +
Sbjct: 228 VLAIETVWIKNPMTTVNQIYNIGGTDELDNLSLIKLIMEIFG-RGEIQFIKDRNYNDTNY 286
Query: 288 LMDSSKLARLGWRAKIELRDGL 309
+D++K+ LGW KI L GL
Sbjct: 287 SIDTTKIHNLGWSPKISLVQGL 308
>UNIPROTKB|Q3T105 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA CTD:2582
HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:DAAA02006426
EMBL:BC102185 IPI:IPI00686007 RefSeq:NP_001193137.1
UniGene:Bt.12474 SMR:Q3T105 STRING:Q3T105
Ensembl:ENSBTAT00000006586 GeneID:523154 KEGG:bta:523154
InParanoid:Q3T105 NextBio:20873677 Uniprot:Q3T105
Length = 348
Score = 141 (54.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 72/287 (25%), Positives = 127/287 (44%)
Query: 51 ELDLTRQSDVESFFAAEKPSYV-IVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFR 109
E+D+ Q+ ++ F +K S++ ++ A + + + P ++ +NL +++
Sbjct: 64 EMDILDQAALQRLF--KKHSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRA 121
Query: 110 YGVKKLLFLGSSCIYPKFAPQPIP-ENALLTGPLEPTNEWYAIAKIAGIKM----CQAYQ 164
+GVK L+F S+ +Y PQ +P + A TG TN Y +K +M CQA +
Sbjct: 122 HGVKNLVFSSSATVYGN--PQYLPLDEAHPTGGC--TNP-YGKSKFFIEEMIRDLCQADK 176
Query: 165 ------IQYKFNAISGMPTNLYGPNDNFHPEN--SHVLPALMRRFHEAKVNGAKEVVVWG 216
++Y FN I + G + P N +V + R V G G
Sbjct: 177 AWNAVLLRY-FNPIGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREVLNVFGNDYDTEDG 235
Query: 217 TGSPLREFLHVDDLAD---AVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGE 273
TG +R+++HV DLA A + + E G N+G+G S+ ++ + +++A G +
Sbjct: 236 TG--VRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP 293
Query: 274 L-VWDSSKPDGTPRKLMDSSKLARLGWRAKIELRDGLADTYKWYLEN 319
V + D S L LGW A + L D ++W +N
Sbjct: 294 YKVVARREGDVAACYANPSLALKELGWSAALGLDRMCEDLWRWQKQN 340
Score = 53 (23.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFTNLLL 46
K+ V G G +GS V +LL G++ +++
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPMVI 32
>TIGR_CMR|CPS_2147 [details] [associations]
symbol:CPS_2147 "UDP-glucose 4-epimerase" species:167879
"Colwellia psychrerythraea 34H" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_268872.1 ProteinModelPortal:Q482Z5 SMR:Q482Z5
STRING:Q482Z5 GeneID:3518989 KEGG:cps:CPS_2147 PATRIC:21467411
OMA:QTAMGIR BioCyc:CPSY167879:GI48-2217-MONOMER Uniprot:Q482Z5
Length = 340
Score = 154 (59.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 73/324 (22%), Positives = 135/324 (41%)
Query: 13 SEKSAKIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYV 72
S K +I + + + ++ ++ + TN + T + D+ ++ +E F K V
Sbjct: 23 STKEQEIVIVDNLSNSSTKVLERIKQI--TNKTV-TFIKADVCDENALEQVFNEHKIEAV 79
Query: 73 IVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPI 132
I A + + +N P + N+ ++ +Y VK L+F S+ +Y P+
Sbjct: 80 IHFAG-LKAVGESNEIPLAYYQNNVSGTITLLRVMAKYQVKNLVFSSSATVYGNNV-SPL 137
Query: 133 PENALL--TGPLEPTNEWYAIAKIAGIKMCQAYQI---QYKFNAISGMPTNLYGPNDNFH 187
E T P T K ++ I +Y FN I + L G N N
Sbjct: 138 NETMATSATNPYGQTKLMVEHVLFDLAKSDASWSIACLRY-FNPIGAHQSGLIGENPNGI 196
Query: 188 PEN--SHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYD--- 242
P N +V + R + ++ G GTG +R+++HV DLA V ++
Sbjct: 197 PNNLLPYVAQVAVGRLEQLQIFGDDYDTQDGTG--VRDYIHVVDLAQGHVKALESLGHAK 254
Query: 243 ----GLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDS-SKPDGTPRKLMDSSKLAR- 296
G + +N+G+G S+ E+ K+ + ++ + + G + + LA
Sbjct: 255 GTVKGCQAINLGTGNGTSVLEIVNTFKDIS--KQDIPYQVVPRRAGDLATVYADASLANE 312
Query: 297 -LGWRAKIELRDGLADTYKWYLEN 319
L W+AK++L + DT++W EN
Sbjct: 313 LLDWQAKLDLTAMIQDTWRWQSEN 336
>TIGR_CMR|CBU_0677 [details] [associations]
symbol:CBU_0677 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HSSP:P09147
EMBL:AF387640 ProteinModelPortal:Q93N66 Uniprot:Q93N66
Length = 344
Score = 154 (59.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 86/309 (27%), Positives = 129/309 (41%)
Query: 21 VAGHRGLVGSAIVRKLLSLGFTNLLL-------RTHAEL-----DLTRQ-SDVESFFAA- 66
V G G +GS +V LL GF ++ R + E DLT + D+ A
Sbjct: 8 VTGGAGFIGSHMVDLLLDCGFQVRVIDNLKGGHRRNLEHRANNPDLTFEIKDICELSAPH 67
Query: 67 ---EKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCI 123
E YV A +G I + P +++ N+ V++ A VKKL++ SS
Sbjct: 68 PLFENVDYVFHFAG-IGDIVPSIENPIDYLQTNVMGTVRVLECARAANVKKLVYAASSSC 126
Query: 124 YPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMC-QAYQIQYKFNAISGMPTNLYGP 182
Y A P E+ P+ P YA++K G + +Q+ Y S N YG
Sbjct: 127 YG-LADVPTREDH----PIAPQYP-YALSKYLGEEAAFHWFQV-YGLPVNSIRIFNAYGT 179
Query: 183 NDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYD 242
+ V A+ F + K+ K V G G+ R+FL+V D+A A + +
Sbjct: 180 R----VRTTGVYGAVFGVFFKQKL-ADKPFTVVGDGTQRRDFLYVTDVARAFLKAAETRK 234
Query: 243 GLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLAR-LGWRA 301
E N+G+G SI L E +G GE+ + +P D SK+ R LGW
Sbjct: 235 VGETWNLGAGNPQSINRLVE----LIG--GEVEYIPKRPGEPDCTWADISKIKRDLGWEP 288
Query: 302 KIELRDGLA 310
I DG++
Sbjct: 289 TITFADGVS 297
>UNIPROTKB|G4MX57 [details] [associations]
symbol:MGG_08012 "UDP-glucose 4-epimerase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:CM001232 KO:K01784 RefSeq:XP_003714962.1
ProteinModelPortal:G4MX57 SMR:G4MX57 EnsemblFungi:MGG_08012T0
GeneID:2678278 KEGG:mgr:MGG_08012 Uniprot:G4MX57
Length = 369
Score = 121 (47.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 43/168 (25%), Positives = 80/168 (47%)
Query: 165 IQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGT------G 218
++Y FN P+ L G + P N +LP L + ++++V+G G
Sbjct: 193 LRY-FNPCGAHPSGLMGEDPQGVPFN--LLPLL----GQVATGQREKLLVFGDDYSSRDG 245
Query: 219 SPLREFLHVDDLAD----AVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGEL 274
+ +R+++HV DLA A+ ++ D G++ N+GSG+ ++ E+ + VG +L
Sbjct: 246 TAIRDYIHVLDLAKGHLAALNYLRDNKPGVKAWNLGSGRGSTVFEMIKAFSSVVG--RDL 303
Query: 275 VWDS-SKPDGTPRKLMDSSKLAR--LGWRAKIELRDGLADTYKWYLEN 319
++ + G L + LA LGW+ ++ + D D +KW N
Sbjct: 304 PYEVVPRRQGDVLDLTANPALANKELGWKTELRMEDACQDLWKWVKNN 351
Score = 75 (31.5 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 22/101 (21%), Positives = 48/101 (47%)
Query: 52 LDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYG 111
+D+T ++ ++ F A ++ A + + + P E+ +N+ +++ S ++
Sbjct: 60 VDITDEAALDKVFDAHPEIDSVIHFAALKAVGESGEIPLEYYRVNVGGSISLLRSMQKHN 119
Query: 112 VKKLLFLGSSCIYPKFA--PQ--PIPENALLTGPLEPTNEW 148
V ++F S+ +Y P PIPE+ P+ PTN +
Sbjct: 120 VCNIVFSSSATVYGDATRVPNMIPIPEHC----PIGPTNTY 156
>ASPGD|ASPL0000073187 [details] [associations]
symbol:ugeA species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=RCA;IDA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0042125 "protein
galactosylation" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:BN001303
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 OMA:ADKAWNA
ProteinModelPortal:C8VAU8 EnsemblFungi:CADANIAT00005702
Uniprot:C8VAU8
Length = 371
Score = 104 (41.7 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 42/169 (24%), Positives = 79/169 (46%)
Query: 165 IQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKE-VVVWGT------ 217
++Y FN P+ + G + P N +LP L + G +E ++V+G
Sbjct: 195 LRY-FNPAGAHPSGIMGEDPQGVPYN--LLPLLAQ-----VATGKREKLLVFGDDYASHD 246
Query: 218 GSPLREFLHVDDLAD----AVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGE 273
G+ +R+++H+ DLAD A+ ++ G+ N+G+G+ ++ E+ +AVG +
Sbjct: 247 GTAIRDYIHILDLADGHLKALNYLRANNPGVRAWNLGTGRGSTVYEMIRAFSKAVG--RD 304
Query: 274 LVWD-SSKPDGTPRKLMDSSKLAR--LGWRAKIELRDGLADTYKWYLEN 319
L ++ + + G L + A LGW+A+ L D + W N
Sbjct: 305 LPYEVAPRRAGDVLNLTSNPTRANTELGWKAQRTLEQACEDLWLWTKNN 353
Score = 87 (35.7 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 28/110 (25%), Positives = 51/110 (46%)
Query: 50 AELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFR 109
A+LD+T ++ + F A ++ A + + + P ++ +N+ ++ S R
Sbjct: 58 AQLDVTDEAAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLDYYHVNVYGTICLLRSMVR 117
Query: 110 YGVKKLLFLGSSCIY---PKFAPQ-PIPENALLTGPLEPTNEWYAIAKIA 155
+ V ++F S+ +Y +F PIPE+ PL PTN Y K A
Sbjct: 118 HNVTNIVFSSSATVYGDATRFPDMIPIPEHC----PLGPTNP-YGNTKFA 162
Score = 42 (19.8 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 16 SAKIFVAGHRGLVGSAIVRKLLSLGF 41
S + V G G +GS LL G+
Sbjct: 3 SGSVLVTGGTGYIGSFTTLALLEAGY 28
>TAIR|locus:2123466 [details] [associations]
symbol:UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214 InterPro:IPR016040
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
EMBL:AL161518 ProtClustDB:PLN02240 EMBL:AF080118 EMBL:AL049525
EMBL:AY065354 EMBL:AY117180 EMBL:AY140073 EMBL:AY085528
IPI:IPI00540537 PIR:T01881 PIR:T04291 RefSeq:NP_192834.1
UniGene:At.48845 ProteinModelPortal:Q9SN58 SMR:Q9SN58 IntAct:Q9SN58
STRING:Q9SN58 PaxDb:Q9SN58 PRIDE:Q9SN58 EnsemblPlants:AT4G10960.1
GeneID:826696 KEGG:ath:AT4G10960 TAIR:At4g10960 InParanoid:Q9SN58
OMA:ADKAWNA PhylomeDB:Q9SN58 Genevestigator:Q9SN58 Uniprot:Q9SN58
Length = 351
Score = 149 (57.5 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 74/290 (25%), Positives = 128/290 (44%)
Query: 51 ELDLTRQSDVESFFAAEKPSYVI-VAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFR 109
++DL +S +E F+ K VI A K G P + NL +++ +
Sbjct: 62 QVDLRDRSALEKIFSETKFDAVIHFAGLKAVGESVEK--PLLYYNNNLVGTITLLEVMAQ 119
Query: 110 YGVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQ-AY--QIQ 166
+G K L+F S+ +Y +P+ +P P+ N Y K+ ++C+ Y +
Sbjct: 120 HGCKNLVFSSSATVYG--SPKEVPCTEEF--PISALNP-YGRTKLFIEEICRDVYGSDPE 174
Query: 167 YK------FNAISGMPTNLYGPNDNFHPENSHVLP-----ALMRRFHEAKVNGAKEVVVW 215
+K FN + P+ G + P N ++P A+ RR H V G
Sbjct: 175 WKIILLRYFNPVGAHPSGDIGEDPRGIPNN--LMPFVQQVAVGRRPH-LTVFGNDYNTKD 231
Query: 216 GTGSPLREFLHVDDLADAVVFMMDEYD----GLEHLNVGSGKEVSIKELAEWVKEAVGFE 271
GTG +R+++HV DLAD + + + + G E N+G+G S+ E+ + ++A G +
Sbjct: 232 GTG--VRDYIHVIDLADGHIAALRKLEDCKIGCEVYNLGTGNGTSVLEMVDAFEKASGKK 289
Query: 272 GELVWDSSKPDGTPRKLMDSSKLAR--LGWRAKIELRDGLADTYKWYLEN 319
LV +P G + S++ A L W+AK + + D + W N
Sbjct: 290 IPLVIAGRRP-GDAEVVYASTERAESELNWKAKYGIEEMCRDLWNWASNN 338
Score = 41 (19.5 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 19 IFVAGHRGLVGSAIVRKLLSLGFT 42
+ V+G G +GS V +LL G++
Sbjct: 6 VLVSGGAGYIGSHTVLQLLLGGYS 29
>TIGR_CMR|SO_3188 [details] [associations]
symbol:SO_3188 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 HSSP:P26391 RefSeq:NP_718744.1
ProteinModelPortal:Q8ECF4 SMR:Q8ECF4 GeneID:1170881
KEGG:son:SO_3188 PATRIC:23526058 OMA:NAARATW Uniprot:Q8ECF4
Length = 375
Score = 134 (52.2 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 48/191 (25%), Positives = 90/191 (47%)
Query: 139 TGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFH-PENSHVLPAL 197
T P P++ Y+ +K + + +A+ Y F I +N YGP +H PE ++P +
Sbjct: 176 TTPYTPSSP-YSASKASSDHLVRAWLRTYGFPTIVTNCSNNYGP---YHFPEK--LIPLV 229
Query: 198 MRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVSI 257
+ E K + ++G G +R++L+V+D A A+ ++ E E N+G E
Sbjct: 230 ILNALEGK-----PLPIYGKGDQIRDWLYVEDHARALFKVVTEGKVGETYNIGGHNEKRN 284
Query: 258 KELAEW--------VKEAVGFEGELVWDSSKPDGTPRKLMDSSKL-ARLGWRAKIELRDG 308
E+ + V + + ++ + + +P R +D++K+ A L W+ + G
Sbjct: 285 LEVVQTICSILDSLVPKNTPYAEQIAYVADRPGHDRRYAIDATKMSAELDWQPQETFETG 344
Query: 309 LADTYKWYLEN 319
L T +WYL N
Sbjct: 345 LRKTVEWYLAN 355
Score = 58 (25.5 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELD-LTRQSDVESFFA-AEKPSY 71
KI V G G +GSA+VR ++ G T + +D LT ++ES + A+ P Y
Sbjct: 2 KILVTGGAGFIGSAVVRHII--GNTQDCV---VNVDKLTYAGNLESLTSVADSPRY 52
>MGI|MGI:1921496 [details] [associations]
symbol:Gale "galactose-4-epimerase, UDP" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISO;IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IDA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0019388
"galactose catabolic process" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 MGI:MGI:1921496 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:BC027438
IPI:IPI00153129 RefSeq:NP_848476.1 UniGene:Mm.247946
ProteinModelPortal:Q8R059 SMR:Q8R059 STRING:Q8R059
PhosphoSite:Q8R059 PaxDb:Q8R059 PRIDE:Q8R059
Ensembl:ENSMUST00000102540 Ensembl:ENSMUST00000102541 GeneID:74246
KEGG:mmu:74246 InParanoid:Q8R059 ChiTaRS:GALE NextBio:340230
Bgee:Q8R059 CleanEx:MM_GALE Genevestigator:Q8R059
GermOnline:ENSMUSG00000028671 Uniprot:Q8R059
Length = 347
Score = 138 (53.6 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 70/289 (24%), Positives = 129/289 (44%)
Query: 51 ELDLTRQSDVESFFAAEKPSY-VIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFR 109
E+D+ Q+ ++ F +K S+ ++ A + + + P ++ +NL +++
Sbjct: 63 EMDILDQAALQHLF--KKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRA 120
Query: 110 YGVKKLLFLGSSCIYPKFAPQPIP-ENALLTGPLEPTNEWYAIAKIAGIKM----CQA-- 162
+GVK L+F S+ +Y PQ +P + A TG TN Y +K +M C+A
Sbjct: 121 HGVKNLVFSSSATVYGN--PQYLPLDEAHPTGGC--TNP-YGKSKFFIEEMIRDLCRADT 175
Query: 163 ----YQIQYKFNAISGMPTNLYGPNDNFHPEN--SHVLPALMRRFHEAKVNGAKEVVVWG 216
++Y FN I + G + P N +V + R V G G
Sbjct: 176 AWNAVLLRY-FNPIGAHASGRIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDG 234
Query: 217 TGSPLREFLHVDDLAD---AVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGE 273
TG +R+++HV DLA A + + E G N+G+G S+ ++ + +++A G +
Sbjct: 235 TG--VRDYIHVVDLAKGHIAALKKLKEQCGCRTYNLGTGTGYSVLQMVQAMEKASG--KK 290
Query: 274 LVWDS-SKPDGTPRKLMDSSKLAR--LGWRAKIELRDGLADTYKWYLEN 319
+ + ++ +G + LA LGW A + L D ++W +N
Sbjct: 291 IPYKVVARREGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRWQKQN 339
Score = 52 (23.4 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFTNLLL 46
K+ V G G +GS V +LL G++ +++
Sbjct: 3 KVLVTGGAGYIGSHTVLELLEAGYSPVVI 31
>WB|WBGene00005019 [details] [associations]
symbol:sqv-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060465 "pharynx development" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0009792
GO:GO:0002009 GO:GO:0005737 GO:GO:0018991 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0040025
GeneTree:ENSGT00530000063128 KO:K08678 GO:GO:0048040 EMBL:FO081016
EMBL:AY147933 PIR:T15892 RefSeq:NP_501418.1 UniGene:Cel.19768
ProteinModelPortal:G5EF65 SMR:G5EF65 EnsemblMetazoa:D2096.4.1
EnsemblMetazoa:D2096.4.2 GeneID:177631 KEGG:cel:CELE_D2096.4
CTD:177631 WormBase:D2096.4 OMA:FSEALIM NextBio:897688
Uniprot:G5EF65
Length = 467
Score = 153 (58.9 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 76/329 (23%), Positives = 147/329 (44%)
Query: 8 SCSFLSEKSAK-IFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAA 66
S + +E++ K I + G G VGS +V KL+ G + L + R+ +VE +
Sbjct: 127 SVRYRNEETRKRILITGGAGFVGSHLVDKLMLDGHEVIALDNYFT---GRKKNVEHWIGH 183
Query: 67 ---EKPSYVIVAA--AKVGGIH--ANNTYPAEFIAINLQ-IQTNVIDSAFRYGVKK---- 114
E + +V +V I+ A+ P ++ ++ I+TN + + G+ K
Sbjct: 184 PNFEMVHHDVVNPYFVEVDQIYHLASPASPPHYMYNPVKTIKTNTLGTINMLGLAKRVKA 243
Query: 115 -LLFLGSSCIY--PKFAPQPIPE--NALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKF 169
+L +S +Y P+ PQP + GP +E +A+ + AY Q
Sbjct: 244 TVLLASTSEVYGDPEVHPQPETYWGHVNTIGPRACYDEGKRVAE----SLMVAYNKQENI 299
Query: 170 NAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDD 229
N +GP H + V+ + + + K + ++G G+ R F +V D
Sbjct: 300 KIRIARIFNTFGPR--MHMNDGRVVSNFIIQALQDK-----PITIYGNGTQTRSFQYVTD 352
Query: 230 LADAVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAV-GFEGELVWDSSKPDGTPRKL 288
L D ++ +M+ L +N+G+ +E +I + A +++ V G E+V S+ D ++
Sbjct: 353 LVDGLIKLMNSNYSLP-VNIGNPEEHTIGQFATIIRDLVPGSTSEIVNLESQQDDPQQRR 411
Query: 289 MDSSKLA-RLGWRAKIELRDGLADTYKWY 316
D + A ++ W ++ ++DGL T ++
Sbjct: 412 PDIRRAAEQISWAPQVHMKDGLLKTVDYF 440
>TAIR|locus:2010371 [details] [associations]
symbol:UGE1 "UDP-D-glucose/UDP-D-galactose 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0046983 "protein
dimerization activity" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0046369 "galactose biosynthetic process"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AC012187
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 EMBL:Z54214 EMBL:AF334724
EMBL:AY054207 EMBL:AY120709 EMBL:BT000032 IPI:IPI00533120
PIR:B86261 PIR:S62783 RefSeq:NP_172738.1 UniGene:At.20506
UniGene:At.27284 ProteinModelPortal:Q42605 SMR:Q42605 IntAct:Q42605
STRING:Q42605 PaxDb:Q42605 PRIDE:Q42605 EnsemblPlants:AT1G12780.1
GeneID:837834 KEGG:ath:AT1G12780 TAIR:At1g12780 InParanoid:Q42605
OMA:CEAILAD PhylomeDB:Q42605 ProtClustDB:PLN02240
BioCyc:ARA:AT1G12780-MONOMER BioCyc:MetaCyc:AT1G12780-MONOMER
Genevestigator:Q42605 GermOnline:AT1G12780 Uniprot:Q42605
Length = 351
Score = 145 (56.1 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 72/289 (24%), Positives = 126/289 (43%)
Query: 53 DLTRQSDVESFFAAEKPSYVI-VAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYG 111
DL + D+E F+ ++ VI A K G N P + NL N+ ++ +Y
Sbjct: 68 DLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVEN--PRRYFDNNLVGTINLYETMAKYN 125
Query: 112 VKKLLFLGSSCIYPKFAPQPIP--ENALLTGPLEPTNEWYA-IAKIA-GIKMCQA-YQI- 165
K ++F S+ +Y + P+ IP E+ L + P + +IA I+ + ++I
Sbjct: 126 CKMMVFSSSATVYGQ--PEKIPCMEDFELKA-MNPYGRTKLFLEEIARDIQKAEPEWRII 182
Query: 166 --QYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWG------T 217
+Y FN + + G + P N LM + V E+ V+G
Sbjct: 183 LLRY-FNPVGAHESGSIGEDPKGIPNN------LMPYIQQVAVGRLPELNVYGHDYPTED 235
Query: 218 GSPLREFLHVDDLADAVVFMM-----DEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEG 272
GS +R+++HV DLAD + + D G N+G+G+ S+ E+ ++A G +
Sbjct: 236 GSAVRDYIHVMDLADGHIAALRKLFADPKIGCTAYNLGTGQGTSVLEMVAAFEKASGKKI 295
Query: 273 ELVWDSSKPDGTPRKLMDSSKLAR--LGWRAKIELRDGLADTYKWYLEN 319
+ + G + S++ A LGW+AK + + D +KW N
Sbjct: 296 PIKL-CPRRSGDATAVYASTEKAEKELGWKAKYGVDEMCRDQWKWANNN 343
Score = 43 (20.2 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 13 SEKSAKIFVAGHRGLVGSAIVRKLLSLGF 41
S I V G G +G+ V +LL GF
Sbjct: 3 SSVEQNILVTGGAGFIGTHTVVQLLKDGF 31
>UNIPROTKB|I3LL84 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 EMBL:FP475977 RefSeq:XP_003356250.1
Ensembl:ENSSSCT00000028713 GeneID:100621392 KEGG:ssc:100621392
Uniprot:I3LL84
Length = 348
Score = 137 (53.3 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 72/287 (25%), Positives = 125/287 (43%)
Query: 51 ELDLTRQSDVESFFAAEKPSYV-IVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFR 109
E+D+ Q+ ++ F +K +V ++ A + + + P ++ +NL +++
Sbjct: 64 EMDILDQAALQRLF--KKYHFVAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA 121
Query: 110 YGVKKLLFLGSSCIYPKFAPQPIP-ENALLTGPLEPTNEWYAIAKIAGIKM----CQAYQ 164
+GVK L+F S+ +Y PQ +P + A TG TN Y +K +M CQA +
Sbjct: 122 HGVKNLVFSSSATVYGN--PQYLPLDEAHPTGGC--TNP-YGKSKFFIEEMIRDLCQADK 176
Query: 165 ------IQYKFNAISGMPTNLYGPNDNFHPEN--SHVLPALMRRFHEAKVNGAKEVVVWG 216
++Y FN I + G + P N +V + R V G G
Sbjct: 177 AWNAVLLRY-FNPIGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDG 235
Query: 217 TGSPLREFLHVDDLAD---AVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGE 273
TG +R+++HV DLA A + + E G N+G+G S+ ++ +++A G +
Sbjct: 236 TG--VRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVRAMEKASGKKIP 293
Query: 274 L-VWDSSKPDGTPRKLMDSSKLARLGWRAKIELRDGLADTYKWYLEN 319
V + D S L LGW A + L D ++W +N
Sbjct: 294 YKVVARREGDVAACYANPSLALKELGWTAALGLDRMCEDLWRWQKQN 340
Score = 52 (23.4 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFTNLLL 46
K+ V G G +GS V +LL G++ +++
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPVVI 32
>TAIR|locus:2015253 [details] [associations]
symbol:UGE3 "UDP-D-glucose/UDP-D-galactose 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IPI] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 EMBL:CP002684 GO:GO:0009555 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:AY085887 EMBL:BT024882 EMBL:AK117913
IPI:IPI00534992 RefSeq:NP_564811.1 UniGene:At.36168
ProteinModelPortal:Q8LDN8 SMR:Q8LDN8 STRING:Q8LDN8 PRIDE:Q8LDN8
EnsemblPlants:AT1G63180.1 GeneID:842622 KEGG:ath:AT1G63180
TAIR:At1g63180 InParanoid:Q8LDN8 OMA:FWADASL PhylomeDB:Q8LDN8
Genevestigator:Q8LDN8 Uniprot:Q8LDN8
Length = 351
Score = 142 (55.0 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 65/281 (23%), Positives = 114/281 (40%)
Query: 53 DLTRQSDVESFFAAEKPSYVI-VAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYG 111
DL + D+E F+ ++ VI A K G N P + NL N+ ++ +Y
Sbjct: 68 DLRNKGDIEKLFSNQRFDAVIHFAGLKAVGESVGN--PRRYFDNNLVGTINLYETMAKYN 125
Query: 112 VKKLLFLGSSCIY--PKFAPQPIPENALLTGPLEPTNEWYA-IAKI--AGIKMCQAYQIQ 166
K ++F S+ +Y P+ P P T + IA+ A + ++
Sbjct: 126 CKMMVFSSSATVYGQPEIVPCVEDFELQAMNPYGRTKLFLEEIARDIHAAEPEWKIILLR 185
Query: 167 YKFNAISGMPTNLYGPNDNFHPEN--SHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREF 224
Y FN + + G + P N ++ + R E V G + GS +R++
Sbjct: 186 Y-FNPVGAHESGRIGEDPKGIPNNLMPYIQQVAVGRLPELNVFGHDYPTM--DGSAVRDY 242
Query: 225 LHVDDLADAVVFMM-----DEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSS 279
+HV DLAD V + D G N+G+G+ S+ E+ ++A G + +
Sbjct: 243 IHVMDLADGHVAALNKLFSDSKIGCTAYNLGTGQGTSVLEMVSSFEKASGKKIPIKLCPR 302
Query: 280 KPDGTPRKLMDSSKLAR-LGWRAKIELRDGLADTYKWYLEN 319
+ + K + LGW+AK + + D + W +N
Sbjct: 303 RAGDATAVYASTQKAEKELGWKAKYGVDEMCRDQWNWANKN 343
Score = 46 (21.3 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 13 SEKSAKIFVAGHRGLVGSAIVRKLLSLGF 41
S I V G G +G+ V +LL+ GF
Sbjct: 3 SSVEQNILVTGGAGFIGTHTVVQLLNQGF 31
>TAIR|locus:2163401 [details] [associations]
symbol:DUR "DEFECTIVE UGE IN ROOT" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580 GO:GO:0045227
eggNOG:COG1087 HOGENOM:HOG000168001 KO:K12448
ProtClustDB:CLSN2686084 GO:GO:0050373 GO:GO:0003978 GO:GO:0006012
GO:GO:0033358 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AB017065 IPI:IPI00546765
RefSeq:NP_199261.1 UniGene:At.55356 ProteinModelPortal:Q9FI17
SMR:Q9FI17 STRING:Q9FI17 PaxDb:Q9FI17 PRIDE:Q9FI17
EnsemblPlants:AT5G44480.1 GeneID:834475 KEGG:ath:AT5G44480
TAIR:At5g44480 InParanoid:Q9FI17 OMA:VRWGPLE PhylomeDB:Q9FI17
Genevestigator:Q9FI17 GermOnline:AT5G44480 Uniprot:Q9FI17
Length = 436
Score = 150 (57.9 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 70/278 (25%), Positives = 118/278 (42%)
Query: 53 DLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQT-NVIDSAFRYG 111
DL VE F+ E ++ A V + + YP ++ N+ T V+++ R+
Sbjct: 154 DLGDPLAVEKIFS-ENAFDAVMHFAAVAYVGESTLYPLKYYH-NITSNTLGVLEAMARHK 211
Query: 112 VKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQ----AYQIQY 167
VKKL++ + Y + PI E+ P+ P + +A+ + + A I
Sbjct: 212 VKKLIYSSTCATYGEPEKMPITEDTPQV-PINPYGKAKKMAEDMILDFSKNSDMAVMILR 270
Query: 168 KFNAISGMPTNLYG--PNDNFHPENSHVLPALM---RRFHEA-KVNGAKEVVVWGTGSPL 221
FN I P G P E + A R F +V G G+ +
Sbjct: 271 YFNVIGSDPGGRLGEAPRPELR-EQGRISGACFDAARGFIPGLQVKGTDYKT--SDGTCI 327
Query: 222 REFLHVDDLADAVVFMMDEYDGLEH--LNVGSGKEVSIKELAEWVKEAVGFEGELVWDSS 279
R+++ V DL DA V +++ + NVG+GK S+KE E K+A G E ++ +
Sbjct: 328 RDYIDVTDLVDAHVKALEKAQPRKVGIYNVGTGKGRSVKEFVEACKKATGVEIKVDFLPR 387
Query: 280 KPDGTPRKLMDSSKLAR-LGWRAKI-ELRDGLADTYKW 315
+P D +K+ + L W A+ L+D L ++W
Sbjct: 388 RPGDYAEVYSDPTKILKDLNWTARFTNLQDSLQVAWRW 425
>UNIPROTKB|P55294 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122586
"Neisseria meningitidis MC58" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE002098 GenomeReviews:AE002098_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
ProtClustDB:CLSK877380 EMBL:L09188 PIR:G81242 PIR:S42431
RefSeq:NP_273127.1 RefSeq:NP_273142.1 ProteinModelPortal:P55294
SMR:P55294 EnsemblBacteria:EBNEIT00000009034
EnsemblBacteria:EBNEIT00000009474 GeneID:902170 GeneID:902183
KEGG:nme:NMB0063 KEGG:nme:NMB0079 PATRIC:20355131 OMA:ARSWWNT
BioCyc:NMEN122586:GHGG-64-MONOMER BioCyc:NMEN122586:GHGG-80-MONOMER
Uniprot:P55294
Length = 355
Score = 134 (52.2 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 66/290 (22%), Positives = 130/290 (44%)
Query: 51 ELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRY 110
++D+ +++++ FA +P V+ AA+ + + EFI N+ N++++A Y
Sbjct: 57 QVDICDRAELDRVFAQYRPDAVMHLAAE-SHVDRSIGSAGEFIQTNIVGTFNLLEAARAY 115
Query: 111 GVKKLLFLGSSCIYPKFAPQPI------PENALL-TGPLEPTNEWYAIAKIAGIKMCQAY 163
+ + + + + ++ T P P++ Y+ +K + + +A+
Sbjct: 116 WQQMPSEQHEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSP-YSASKASSDHLVRAW 174
Query: 164 QIQYKFNAISGMPTNLYGPNDNFH-PENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLR 222
Y I +N YGP +H PE ++P ++ ++G K + V+G G +R
Sbjct: 175 LRTYGLPTIVTNCSNNYGP---YHFPEK--LIPLMILN----ALDG-KPLPVYGDGMQIR 224
Query: 223 EFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVS-----------IKELAEWVKEAVG-F 270
++L V+D A A+ ++ E E N+G E + ++ELA V +
Sbjct: 225 DWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARY 284
Query: 271 EGELVWDSSKPDGTPRKLMDSSKLAR-LGWRAKIELRDGLADTYKWYLEN 319
E + + +P R +D++K+ R LGW GL T +WYL+N
Sbjct: 285 EDLITFVQDRPGHDVRYAVDAAKIRRDLGWLPLETFESGLRKTVQWYLDN 334
Score = 54 (24.1 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 18 KIFVAGHRGLVGSAIVRKLL 37
KI V G G +GSA+VR ++
Sbjct: 3 KILVTGGAGFIGSAVVRHII 22
>UNIPROTKB|Q4QRB0 [details] [associations]
symbol:Gale "Gale protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784 EMBL:CH473968
GeneTree:ENSGT00530000063128 CTD:2582 HOVERGEN:HBG001396
UniGene:Rn.29908 EMBL:BC097293 IPI:IPI00882523 RefSeq:NP_542961.2
SMR:Q4QRB0 STRING:Q4QRB0 Ensembl:ENSRNOT00000013322 GeneID:114860
KEGG:rno:114860 InParanoid:Q4QRB0 NextBio:618919
Genevestigator:Q4QRB0 Uniprot:Q4QRB0
Length = 348
Score = 135 (52.6 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 72/289 (24%), Positives = 123/289 (42%)
Query: 51 ELDLTRQSDVESFFAAEKPSYVI-VAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFR 109
E+D+ Q+ ++ F VI A K G P ++ +NL +++
Sbjct: 64 EMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQK--PLDYYRVNLTGTIQLLEIMRA 121
Query: 110 YGVKKLLFLGSSCIYPKFAPQPIP-ENALLTGPLEPTNEWYAIAKIAGIKMCQ------- 161
+GVK L+F S+ +Y PQ +P + A TG TN Y +K +M Q
Sbjct: 122 HGVKSLVFSSSATVYGN--PQYLPLDEAHPTGGC--TNP-YGKSKFFIEEMIQDLCRADT 176
Query: 162 ---AYQIQYKFNAISGMPTNLYGPNDNFHPEN--SHVLPALMRRFHEAKVNGAKEVVVWG 216
A ++Y FN I + G + P N +V + R V G G
Sbjct: 177 AWNAVLLRY-FNPIGAHASGRIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDG 235
Query: 217 TGSPLREFLHVDDLAD---AVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGE 273
TG +R+++HV DLA A + + E G N+G+G S+ ++ + +++A G +
Sbjct: 236 TG--VRDYIHVVDLAKGHIAALKKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASG--KK 291
Query: 274 LVWDS-SKPDGTPRKLMDSSKLAR--LGWRAKIELRDGLADTYKWYLEN 319
+ + ++ +G + LA LGW A + L D ++W +N
Sbjct: 292 IPYKVVARREGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRWQKQN 340
Score = 52 (23.4 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFTNLLL 46
K+ V G G +GS V +LL G++ +++
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPVVI 32
>TIGR_CMR|CBU_0676 [details] [associations]
symbol:CBU_0676 "NAD dependent epimerase/dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GenomeReviews:AE016828_GR GO:GO:0044237 EMBL:AF387640
ProteinModelPortal:Q93N67 PRIDE:Q93N67 PATRIC:17930035
HOGENOM:HOG000168002 ProtClustDB:CLSK905415
BioCyc:CBUR227377:GJ7S-674-MONOMER Uniprot:Q93N67
Length = 337
Score = 147 (56.8 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 86/327 (26%), Positives = 139/327 (42%)
Query: 12 LSEKSAKIFVAGHRGLVGSAIVRKLLSLGFT-----------NLLLRTHAELDLTRQS-- 58
++++ +I V G G VGSA+V +LL LG+ + L + + L++
Sbjct: 1 MTKRFDRILVTGGAGYVGSALVPQLLELGYRVTVYDTLFFGDDFLPKENPYLNIVEGDIR 60
Query: 59 DVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFL 118
D E K + +++ A + + +INL+ ++ +A GVK+ ++
Sbjct: 61 DTERLKQCFKDADAVISLACISNDASFELDETLSTSINLEAFEPMVKAAKAAGVKRFIYA 120
Query: 119 GSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYK---FNAISGM 175
SS +Y + + E L PL N K G MC+ +++ F ++
Sbjct: 121 SSSSVYGVSETKDVTEEHPLV-PLTLYN------KYKG--MCEPLLFKHQSPEFVCVTIR 171
Query: 176 PTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVV 235
P L G + P L + H VN K + V+G GS LR LHV D+ D
Sbjct: 172 PATLCG----YAPRQRLDLSVNILTNHA--VNNNK-ITVFG-GSQLRPNLHVQDMCDLYK 223
Query: 236 FMM---DEYDGLEHLNVGSGKEVSIKELAEWVKEAVG--FEGELVWDS-SKPDGTPRKL- 288
++ DE E NVG + SI E+A VK V F + D + P R
Sbjct: 224 LLLVVPDEKIAGETFNVGYENK-SIMEIAHIVKNIVEEEFPEKAPIDIVTAPTDDIRSYH 282
Query: 289 MDSSKLAR-LGWRAKIELRDGLADTYK 314
++S K+ R LG+ AK + D + D K
Sbjct: 283 INSDKIKRCLGFEAKYSIEDAVRDLCK 309
>TIGR_CMR|BA_5700 [details] [associations]
symbol:BA_5700 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:Q14376 RefSeq:NP_847846.1 RefSeq:YP_022385.1
RefSeq:YP_031541.1 ProteinModelPortal:Q81JK4 SMR:Q81JK4
DNASU:1085447 EnsemblBacteria:EBBACT00000009571
EnsemblBacteria:EBBACT00000018180 EnsemblBacteria:EBBACT00000022977
GeneID:1085447 GeneID:2816576 GeneID:2853003 KEGG:ban:BA_5700
KEGG:bar:GBAA_5700 KEGG:bat:BAS5304 OMA:TENNIDW
ProtClustDB:CLSK888129 BioCyc:BANT260799:GJAJ-5377-MONOMER
BioCyc:BANT261594:GJ7F-5553-MONOMER Uniprot:Q81JK4
Length = 338
Score = 147 (56.8 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 77/323 (23%), Positives = 125/323 (38%)
Query: 8 SCSFLSEKSAKIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAE 67
+C L + KI V + L S+I T + E L R+ E F
Sbjct: 16 TCVELLNNNYKIIVVDN--LSNSSIESLNRVKEITGKQFEFYKENVLNREKMNEIFLENN 73
Query: 68 KPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKF 127
+ + A K G + T P + N+ + D ++ VK +F S+ +Y
Sbjct: 74 IEAVIHFAGFKAVG--ESTTTPLAYYYNNIISAIVLCDVMQKHNVKNFIFSSSATVYGIP 131
Query: 128 APQPIPENALL--TGPLEPTNEWYAIAKIAGIKMCQAYQI---QYKFNAISGMPTNLYGP 182
PI E L T P T K + I +Y FN + G
Sbjct: 132 KTLPITEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEWSIALLRY-FNPFGAHQSGRIGE 190
Query: 183 NDNFHPEN--SHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDE 240
+ N P N +V + + E + G GTG +R+++HV DLA V +++
Sbjct: 191 DPNGIPNNLMPYVTQVAVGKLKELNIFGNDYPTKDGTG--VRDYIHVVDLAKGHVKALEK 248
Query: 241 Y---DGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLAR- 296
G+E N+G+GK S+ E+ + ++ G + +P D SK R
Sbjct: 249 VLKTKGIEAYNLGTGKGYSVLEMVKAFEKVSGKKIPYKVIGRRPGDVAICFADVSKAKRE 308
Query: 297 LGWRAKIELRDGLADTYKWYLEN 319
LGW A+ L + D+++W + N
Sbjct: 309 LGWEAEYGLEEMCVDSWRWQVNN 331
>UNIPROTKB|Q9KLH0 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 136 (52.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 65/249 (26%), Positives = 106/249 (42%)
Query: 89 PAEFIAINLQIQTNVIDSAFRY-GVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNE 147
P E+ N+ T V+ +A R GVK L+F S+ +Y + PI E+ P + N
Sbjct: 93 PLEYYDNNVN-GTLVLVAAMREAGVKSLVFSSSATVYGEPTSVPITESF----PTKAANP 147
Query: 148 WYAIAKIAGIKMCQA-YQ----------IQYKFNAISGMPTNLYGPNDNFHPEN--SHVL 194
Y +K+ ++ C +Q ++Y FN + P+ G + P N V
Sbjct: 148 -YGRSKLM-VEECLTDFQKANPDWSITLLRY-FNPVGSHPSGELGEDPQGIPNNLMPFVT 204
Query: 195 PALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYD---GLEHLNVGS 251
+ R V G+ GTG +R+++HV DLAD + + + GL N+G+
Sbjct: 205 QVAVGRREYLSVFGSDYPTKDGTG--VRDYIHVMDLADGHIAALKKVGTCAGLHIYNLGT 262
Query: 252 GKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLAR-LGWRAKIELRDGLA 310
GK S+ ++ + + A G +P D +K A+ LGW+A L
Sbjct: 263 GKGYSVLDVVKAFETASGRTVPYKLVDRRPGDIAEYWADPTKAAQDLGWKATRNLHTMAQ 322
Query: 311 DTYKWYLEN 319
D + W N
Sbjct: 323 DAWCWQSNN 331
Score = 49 (22.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYV 72
K+ V G G +GS +++ G T ++L +T +E +P +V
Sbjct: 2 KVLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGV-RPQFV 55
>TIGR_CMR|VC_A0774 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 136 (52.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 65/249 (26%), Positives = 106/249 (42%)
Query: 89 PAEFIAINLQIQTNVIDSAFRY-GVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNE 147
P E+ N+ T V+ +A R GVK L+F S+ +Y + PI E+ P + N
Sbjct: 93 PLEYYDNNVN-GTLVLVAAMREAGVKSLVFSSSATVYGEPTSVPITESF----PTKAANP 147
Query: 148 WYAIAKIAGIKMCQA-YQ----------IQYKFNAISGMPTNLYGPNDNFHPEN--SHVL 194
Y +K+ ++ C +Q ++Y FN + P+ G + P N V
Sbjct: 148 -YGRSKLM-VEECLTDFQKANPDWSITLLRY-FNPVGSHPSGELGEDPQGIPNNLMPFVT 204
Query: 195 PALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYD---GLEHLNVGS 251
+ R V G+ GTG +R+++HV DLAD + + + GL N+G+
Sbjct: 205 QVAVGRREYLSVFGSDYPTKDGTG--VRDYIHVMDLADGHIAALKKVGTCAGLHIYNLGT 262
Query: 252 GKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLAR-LGWRAKIELRDGLA 310
GK S+ ++ + + A G +P D +K A+ LGW+A L
Sbjct: 263 GKGYSVLDVVKAFETASGRTVPYKLVDRRPGDIAEYWADPTKAAQDLGWKATRNLHTMAQ 322
Query: 311 DTYKWYLEN 319
D + W N
Sbjct: 323 DAWCWQSNN 331
Score = 49 (22.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 13/55 (23%), Positives = 24/55 (43%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYV 72
K+ V G G +GS +++ G T ++L +T +E +P +V
Sbjct: 2 KVLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGV-RPQFV 55
>POMBASE|SPBPB2B2.12c [details] [associations]
symbol:gal10 species:4896 "Schizosaccharomyces pombe"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IDA]
[GO:0004034 "aldose 1-epimerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=ISS]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0042125
"protein galactosylation" evidence=IMP] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 PomBase:SPBPB2B2.12c GO:GO:0005829 GO:GO:0005634
GO:GO:0033554 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030246 EMBL:CU329671 GenomeReviews:CU329671_GR
SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 RefSeq:NP_596858.1 ProteinModelPortal:Q9HDU3
STRING:Q9HDU3 EnsemblFungi:SPBPB2B2.12c.1 GeneID:2541411
KEGG:spo:SPBPB2B2.12c eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T BRENDA:5.1.3.2 NextBio:20802517
GO:GO:0004034 GO:GO:0033499 GO:GO:0042125 InterPro:IPR018052
PROSITE:PS00545 Uniprot:Q9HDU3
Length = 713
Score = 151 (58.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 75/298 (25%), Positives = 136/298 (45%)
Query: 51 ELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRY 110
+LDL + + F K VI AA + + + P E+ N+ +++ +
Sbjct: 61 KLDLRDKEGLAQIFDTFKIKGVIHFAA-LKAVGESMKLPLEYYDNNICGTITLLNVMREH 119
Query: 111 GVKKLLFLGSSCIY---PKFAPQ-PIPENALLTGPLEPTNEW----YAIAKI-----AGI 157
VK ++F S+ +Y +F PIPE+ P +PTN + YAI I
Sbjct: 120 RVKTVVFSSSATVYGDATRFDNMIPIPESC----PNDPTNPYGKTKYAIENIIKDLHTSD 175
Query: 158 KMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGT 217
+ ++Y FN I P+ L G + P N +LP L + + ++++V+G
Sbjct: 176 NTWRGAILRY-FNPIGAHPSGLLGEDPLGIPNN--LLPFLA----QVAIGRREKLLVFGD 228
Query: 218 ------GSPLREFLHVDDLAD----AVVFM--MDEYDGL-EHLNVGSGKEVSIKELAEWV 264
G+P+R+++HV DLA A+ ++ ++ +G+ N+G+GK S+ ++
Sbjct: 229 DYDSHDGTPIRDYIHVVDLAKGHIAALNYLNKINNSEGMYREWNLGTGKGSSVFDIYHAF 288
Query: 265 KEAVGFEGELVWDS-SKPDGTPRKLMDSSKLAR--LGWRAKIELRDGLADTYKWYLEN 319
+ VG +L ++ + G L S A L W+A++ + D D +KW +EN
Sbjct: 289 CKEVG--KDLPYEVVGRRTGDVLNLTASPNRANSELKWKAELSITDACRDLWKWTIEN 344
Score = 42 (19.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 19 IFVAGHRGLVGSAIVRKLLSLGFTNLLL 46
I V G G +GS V +L++ G+ +++
Sbjct: 8 ILVTGGAGYIGSHTVIELINHGYKVIIV 35
>UNIPROTKB|Q14376 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=EXP;IDA] [GO:0019388 "galactose catabolic
process" evidence=IDA;TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 GO:GO:0000166 GO:GO:0044281
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 EMBL:AL031295 OMA:ADKAWNA CTD:2582
EMBL:L41668 EMBL:AF022382 EMBL:BC001273 EMBL:BC050685
IPI:IPI00553131 RefSeq:NP_000394.2 RefSeq:NP_001008217.1
RefSeq:NP_001121093.1 UniGene:Hs.632380 PDB:1EK5 PDB:1EK6 PDB:1HZJ
PDB:1I3K PDB:1I3L PDB:1I3M PDB:1I3N PDBsum:1EK5 PDBsum:1EK6
PDBsum:1HZJ PDBsum:1I3K PDBsum:1I3L PDBsum:1I3M PDBsum:1I3N
ProteinModelPortal:Q14376 SMR:Q14376 IntAct:Q14376 STRING:Q14376
PhosphoSite:Q14376 DMDM:68056598 PaxDb:Q14376 PRIDE:Q14376
DNASU:2582 Ensembl:ENST00000374497 GeneID:2582 KEGG:hsa:2582
UCSC:uc001bhv.1 GeneCards:GC01M024122 HGNC:HGNC:4116 HPA:HPA007340
MIM:230350 MIM:606953 neXtProt:NX_Q14376 Orphanet:79238
PharmGKB:PA28531 HOVERGEN:HBG001396 InParanoid:Q14376
OrthoDB:EOG4B5P5D PhylomeDB:Q14376 BioCyc:MetaCyc:HS04117-MONOMER
SABIO-RK:Q14376 BindingDB:Q14376 ChEMBL:CHEMBL5843
EvolutionaryTrace:Q14376 GenomeRNAi:2582 NextBio:10213
ArrayExpress:Q14376 Bgee:Q14376 CleanEx:HS_GALE
Genevestigator:Q14376 GermOnline:ENSG00000117308 Uniprot:Q14376
Length = 348
Score = 135 (52.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 70/289 (24%), Positives = 130/289 (44%)
Query: 51 ELDLTRQSDVESFFAAEKPSYV-IVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFR 109
E+D+ Q ++ F +K S++ ++ A + + + P ++ +NL +++
Sbjct: 64 EMDILDQGALQRLF--KKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA 121
Query: 110 YGVKKLLFLGSSCIYPKFAPQPIP-ENALLTGPLEPTNEWYAIAKIAGIKM----CQAYQ 164
+GVK L+F S+ +Y PQ +P + A TG TN Y +K +M CQA +
Sbjct: 122 HGVKNLVFSSSATVYGN--PQYLPLDEAHPTGGC--TNP-YGKSKFFIEEMIRDLCQADK 176
Query: 165 ------IQYKFNAISGMPTNLYGPNDNFHPEN--SHVLPALMRRFHEAKVNGAKEVVVWG 216
++Y FN + G + P N +V + R V G G
Sbjct: 177 TWNAVLLRY-FNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDG 235
Query: 217 TGSPLREFLHVDDLAD---AVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGE 273
TG +R+++HV DLA A + + E G N+G+G S+ ++ + +++A G +
Sbjct: 236 TG--VRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASG--KK 291
Query: 274 LVWDS-SKPDGTPRKLMDSSKLAR--LGWRAKIELRDGLADTYKWYLEN 319
+ + ++ +G + LA+ LGW A + L D ++W +N
Sbjct: 292 IPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQN 340
Score = 50 (22.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFTNLLL 46
K+ V G G +GS V +LL G+ +++
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYLPVVI 32
>TIGR_CMR|DET_0204 [details] [associations]
symbol:DET_0204 "NAD-dependent epimerase/dehydratase
family protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016491 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0044237
GO:GO:0055114 KO:K01784 HOGENOM:HOG000167994 RefSeq:YP_180952.1
ProteinModelPortal:Q3Z9Z7 STRING:Q3Z9Z7 GeneID:3230493
KEGG:det:DET0204 PATRIC:21607483 OMA:NTLATHN ProtClustDB:CLSK837597
BioCyc:DETH243164:GJNF-204-MONOMER Uniprot:Q3Z9Z7
Length = 312
Score = 144 (55.7 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 73/306 (23%), Positives = 130/306 (42%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFT-----NLLLRTHAELDLTRQSDVESFFAAEKPSYV 72
++ V G G +GS +V LLS GF NL + L ++ +E ++
Sbjct: 3 EVLVTGGCGFIGSHLVDALLSQGFKVRVMDNLSNGSLENLKCGQRDKLEIINGNLTDKFL 62
Query: 73 IVAAAKVG-------GIHANNTYPAEFIAINLQIQT----NVIDSAFRYGVKKLLFLGSS 121
+ +A K G HAN A+ I+L+ T N++++ R V +L+F S+
Sbjct: 63 LDSAVK-GCETVFHLAAHANVQNSAKDTGIDLENNTLATHNLLEAMRRNRVDRLVFASSA 121
Query: 122 CIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYG 181
+Y + + E+ GPL P + Y +K+AG + AY Y A N+ G
Sbjct: 122 AVYGESGLTVLDEDY---GPLLPIS-LYGASKLAGEGLISAYSHLYGLKATMFRFANIVG 177
Query: 182 PNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEY 241
+S V+ + R + ++V G GS + +LHV D ++ ++
Sbjct: 178 SR-----RHSGVIYDFVSRLRQ----NPSSLLVLGDGSQSKPYLHVSDCVAGMLLGFEKS 228
Query: 242 D-GLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDG----TPRKLMDSSKLAR 296
L N+G+ V+++++A V +G + S G P+ D S++
Sbjct: 229 TKNLGLYNLGTPDSVAVRDIACLVASEMGLKNVCYSYSGGERGWQGDAPQVRFDISRIRT 288
Query: 297 LGWRAK 302
LG++ K
Sbjct: 289 LGFKPK 294
>UNIPROTKB|P27830 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase 2" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IDA] [GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;IDA] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;IDA] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 EMBL:M87049 OMA:RAYRQQM
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
eggNOG:COG1088 GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 PIR:G65182 RefSeq:YP_026255.1
RefSeq:YP_491651.1 PDB:1BXK PDBsum:1BXK ProteinModelPortal:P27830
SMR:P27830 PRIDE:P27830 EnsemblBacteria:EBESCT00000002573
EnsemblBacteria:EBESCT00000015511 GeneID:12933083 GeneID:948300
KEGG:ecj:Y75_p3387 KEGG:eco:b3788 PATRIC:32123069 EchoBASE:EB1422
EcoGene:EG11453 ProtClustDB:PRK10217
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT2-MONOMER
BioCyc:ECOL316407:JW5598-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT2-MONOMER EvolutionaryTrace:P27830
Genevestigator:P27830 Uniprot:P27830
Length = 355
Score = 131 (51.2 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 66/292 (22%), Positives = 128/292 (43%)
Query: 51 ELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRY 110
++D+ ++++ F +P V+ AA+ + + PA FI N+ ++++A Y
Sbjct: 57 KVDICDRAELARVFTEHQPDCVMHLAAE-SHVDRSIDGPAAFIETNIVGTYTLLEAARAY 115
Query: 111 GV-----KKLLF----LGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQ 161
KK F + + +Y + T P P++ Y+ +K + + +
Sbjct: 116 WNALTEDKKSAFRFHHISTDEVYGDL--HSTDDFFTETTPYAPSSP-YSASKASSDHLVR 172
Query: 162 AYQIQYKFNAISGMPTNLYGPNDNFH-PENSHVLPALMRRFHEAKVNGAKEVVVWGTGSP 220
A+ Y + +N YGP +H PE ++P ++ K + V+G G
Sbjct: 173 AWLRTYGLPTLITNCSNNYGP---YHFPEK--LIPLMI-----LNALAGKSLPVYGNGQQ 222
Query: 221 LREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVS----IKELAEWVKE-------AVG 269
+R++L+V+D A A+ + E N+G E ++ + E ++E V
Sbjct: 223 IRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVA 282
Query: 270 FEGELV-WDSSKPDGTPRKLMDSSKLAR-LGWRAKIELRDGLADTYKWYLEN 319
+L+ + + +P R +D+SK+AR LGW + G+ T +WYL N
Sbjct: 283 HYRDLITFVADRPGHDLRYAIDASKIARELGWLPQETFESGMRKTVQWYLAN 334
Score = 52 (23.4 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 18 KIFVAGHRGLVGSAIVRKLLS 38
KI + G G +GSA+VR +++
Sbjct: 3 KILITGGAGFIGSALVRYIIN 23
>SGD|S000000223 [details] [associations]
symbol:GAL10 "UDP-glucose-4-epimerase" species:4932
"Saccharomyces cerevisiae" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IMP;IDA] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IMP;IDA] [GO:0019318 "hexose metabolic
process" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 SGD:S000000223 GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030246 EMBL:BK006936
GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T GO:GO:0004034 GO:GO:0033499
InterPro:IPR018052 PROSITE:PS00545 EMBL:Z35888 EMBL:X81324
EMBL:K02115 EMBL:M12348 EMBL:K01609 PIR:S45875 RefSeq:NP_009575.1
PDB:1Z45 PDBsum:1Z45 ProteinModelPortal:P04397 SMR:P04397
DIP:DIP-4891N MINT:MINT-526001 STRING:P04397 PeptideAtlas:P04397
PRIDE:P04397 EnsemblFungi:YBR019C GeneID:852307 KEGG:sce:YBR019C
CYGD:YBR019c GeneTree:ENSGT00530000063128 EvolutionaryTrace:P04397
NextBio:970981 Genevestigator:P04397 GermOnline:YBR019C
Uniprot:P04397
Length = 699
Score = 143 (55.4 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 78/299 (26%), Positives = 127/299 (42%)
Query: 51 ELDLTRQSDVESFFAAEKPSYVI-VAAAKVGGI-------HANNTYPAEFIAINLQIQTN 102
E+DL + +E F K VI A K G + +N + + L Q N
Sbjct: 67 EVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN 126
Query: 103 VIDSAFRYGVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEW-YAIAKIAGI---- 157
V S F + ++ G + +P P IPE L GP P YAI I
Sbjct: 127 V--SKFVFSSSATVY-GDATRFPNMIP--IPEECPL-GPTNPYGHTKYAIENILNDLYNS 180
Query: 158 -KMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWG 216
K + I FN I P+ L G + P N +LP + + V +++ ++G
Sbjct: 181 DKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNN--LLPYMA----QVAVGRREKLYIFG 234
Query: 217 T------GSPLREFLHVDDLAD----AVVFM--MDEYDGL-EHLNVGSGKEVSIKELAEW 263
G+P+R+++HV DLA A+ ++ +E +GL N+GSGK ++ E+
Sbjct: 235 DDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHA 294
Query: 264 VKEAVGFEGELVWD-SSKPDGTPRKLMDSSKLAR--LGWRAKIELRDGLADTYKWYLEN 319
+A G + L + + + G L A+ L W+ ++++ D D +KW EN
Sbjct: 295 FCKASGID--LPYKVTGRRAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTEN 351
Score = 47 (21.6 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 13 SEKSAKI-FVAGHRGLVGSAIVRKLLSLGF 41
SE ++KI V G G +GS V +L+ G+
Sbjct: 7 SESTSKIVLVTGGAGYIGSHTVVELIENGY 36
>UNIPROTKB|P0C7J0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:190485
"Xanthomonas campestris pv. campestris str. ATCC 33913" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE008922 GenomeReviews:AE008922_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
ProtClustDB:CLSK445958 RefSeq:NP_636013.1 ProteinModelPortal:P0C7J0
SMR:P0C7J0 GeneID:1001158 KEGG:xcc:XCC0621 PATRIC:24071892
Uniprot:P0C7J0
Length = 351
Score = 141 (54.7 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 50/193 (25%), Positives = 87/193 (45%)
Query: 139 TGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFH-PENSHVLPAL 197
T P P N Y+ +K A + +A+ Y ++ +N YGP +H PE ++P +
Sbjct: 149 TTPYAP-NSPYSASKAASDHLVRAFHHTYGLPVLTTNCSNNYGP---YHFPEK--LIPLV 202
Query: 198 MRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVSI 257
+ AK + + V+G G +R++L V D +A+ ++ + E NVG E
Sbjct: 203 I-----AKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGRVGETYNVGGNSERQN 257
Query: 258 KELAEWV----------KEAVGFEGELVWDSSKPDGTPRKLMDSSKLA-RLGWRAKIELR 306
E+ + + ++ E ++ + + +P R +D+SKL LGW
Sbjct: 258 IEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYAIDASKLKDELGWEPAYTFE 317
Query: 307 DGLADTYKWYLEN 319
G+A T WYL N
Sbjct: 318 QGIAQTVDWYLTN 330
>UNIPROTKB|Q8ECF3 [details] [associations]
symbol:wbpP "UDP-GlkcNAc C4 epimerase WbpP" species:211586
"Shewanella oneidensis MR-1" [GO:0000271 "polysaccharide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 132 (51.5 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 58/259 (22%), Positives = 111/259 (42%)
Query: 71 YVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQ 130
YV+ AA +G + + P A N+ N++ +A VK + SS Y
Sbjct: 93 YVLHQAA-LGSVPRSIADPITTNAANITGFLNMLQAAKEAEVKSFTYAASSSTYGDHPAL 151
Query: 131 P-IPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPE 189
P + +N + PL P YA+ K Y Y F I N++G + P
Sbjct: 152 PKVEQN--IGNPLSP----YAVTKYVNELYASVYARTYGFETIGLRYFNVFGRRQD--PN 203
Query: 190 NSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEH--L 247
++ A++ ++ + + G ++V + G G R+F ++D++ + ++
Sbjct: 204 GAYA--AVIPKWTSSMIKG-EDVFINGDGETSRDFCYIDNVVQMNILAATAASEAKNEVY 260
Query: 248 NVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPD------GTPRKLM-DSSK-LARLGW 299
NV G ++ +L +K+++ G V + P+ G R D SK + RLG+
Sbjct: 261 NVAVGDRTTLNDLYFAIKDSLNANGINV--NQNPNYRDFRAGDVRHSQADVSKAVTRLGY 318
Query: 300 RAKIELRDGLADTYKWYLE 318
+ ++ +G+++ WY E
Sbjct: 319 QYTHKILEGISEAMPWYKE 337
Score = 45 (20.9 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 21 VAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEK 68
+ G G +GS ++ +LL L T + L A +V+S +E+
Sbjct: 20 ITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQ 67
>TIGR_CMR|SO_3189 [details] [associations]
symbol:SO_3189 "polysaccharide biosynthesis protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 132 (51.5 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 58/259 (22%), Positives = 111/259 (42%)
Query: 71 YVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQ 130
YV+ AA +G + + P A N+ N++ +A VK + SS Y
Sbjct: 93 YVLHQAA-LGSVPRSIADPITTNAANITGFLNMLQAAKEAEVKSFTYAASSSTYGDHPAL 151
Query: 131 P-IPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPE 189
P + +N + PL P YA+ K Y Y F I N++G + P
Sbjct: 152 PKVEQN--IGNPLSP----YAVTKYVNELYASVYARTYGFETIGLRYFNVFGRRQD--PN 203
Query: 190 NSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEH--L 247
++ A++ ++ + + G ++V + G G R+F ++D++ + ++
Sbjct: 204 GAYA--AVIPKWTSSMIKG-EDVFINGDGETSRDFCYIDNVVQMNILAATAASEAKNEVY 260
Query: 248 NVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPD------GTPRKLM-DSSK-LARLGW 299
NV G ++ +L +K+++ G V + P+ G R D SK + RLG+
Sbjct: 261 NVAVGDRTTLNDLYFAIKDSLNANGINV--NQNPNYRDFRAGDVRHSQADVSKAVTRLGY 318
Query: 300 RAKIELRDGLADTYKWYLE 318
+ ++ +G+++ WY E
Sbjct: 319 QYTHKILEGISEAMPWYKE 337
Score = 45 (20.9 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 21 VAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEK 68
+ G G +GS ++ +LL L T + L A +V+S +E+
Sbjct: 20 ITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQ 67
>WB|WBGene00018737 [details] [associations]
symbol:F53B1.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0040017
GeneTree:ENSGT00530000063128 EMBL:FO081052 GO:GO:0008460
eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:AYNDARY HSSP:P26391 PIR:T16444
RefSeq:NP_508390.1 UniGene:Cel.908 ProteinModelPortal:Q20697
SMR:Q20697 STRING:Q20697 PaxDb:Q20697 EnsemblMetazoa:F53B1.4
GeneID:180525 KEGG:cel:CELE_F53B1.4 UCSC:F53B1.4 CTD:180525
WormBase:F53B1.4 InParanoid:Q20697 NextBio:909738 Uniprot:Q20697
Length = 342
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 55/225 (24%), Positives = 104/225 (46%)
Query: 102 NVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQ 161
++++S ++ GVKKL+ + + +Y P++ + P PTN YA +K A + +
Sbjct: 120 SIVNSPYK-GVKKLVHISTDEVYGDSFEDTTPKSESASLP-NPTNP-YAASKAACEMVIR 176
Query: 162 AYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPL 221
+Y YK + N+YGP H + L+ +F + ++G K + G G
Sbjct: 177 SYWHSYKLPYVMVRMNNVYGPRQ-IHTK-------LIPKFTKLALDG-KPYPLMGDGLHT 227
Query: 222 REFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVG--FEGELVWDSS 279
R +++V+D ++A+ + E E N+G+ E++ EL + + V E +
Sbjct: 228 RSWMYVEDCSEAITRVALEGTLGEIYNIGTDFEMTNIELTKMIHFTVSKLLNREPTAPTF 287
Query: 280 KP-DGTP----RKLMDSSKLAR-LGWRAKIELRDGLADTYKWYLE 318
P P R +D SK+ +GW+ +GL T +Y++
Sbjct: 288 APIPDRPYHDRRYYIDFSKIRNAMGWQCTTPFSEGLMKTIDYYVK 332
>TIGR_CMR|BA_1230 [details] [associations]
symbol:BA_1230 "dTDP-glucose 4,6-dehydratase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009243
"O antigen biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0009225
GO:GO:0008460 TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006
KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM RefSeq:NP_843702.1
RefSeq:YP_017844.1 RefSeq:YP_027409.1 PDB:4EGB PDBsum:4EGB
ProteinModelPortal:Q81TP0 SMR:Q81TP0 DNASU:1085406
EnsemblBacteria:EBBACT00000011863 EnsemblBacteria:EBBACT00000016310
EnsemblBacteria:EBBACT00000023983 GeneID:1085406 GeneID:2815086
GeneID:2848339 KEGG:ban:BA_1230 KEGG:bar:GBAA_1230 KEGG:bat:BAS1137
ProtClustDB:CLSK916141 BioCyc:BANT260799:GJAJ-1213-MONOMER
BioCyc:BANT261594:GJ7F-1267-MONOMER Uniprot:Q81TP0
Length = 322
Score = 135 (52.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 57/256 (22%), Positives = 109/256 (42%)
Query: 67 EKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPK 126
E+ VIV A + + P F N+ +++ +Y KL+ + + +Y
Sbjct: 72 ERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGS 131
Query: 127 FAPQP-IPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDN 185
E PL P N Y+ +K + + AY Y+ I +N YGP
Sbjct: 132 LGKTGRFTEET----PLAP-NSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQ- 185
Query: 186 FHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLE 245
+PE ++P ++ E K ++ ++G G +R++LHV D A+ ++ + E
Sbjct: 186 -YPEK--LIPLMVTNALEGK-----KLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGRVGE 237
Query: 246 HLNVGSGKEVSIKELAEWVKEAVG-FEGELVWDSSKPDGTPRKLMDSSKLAR-LGWRAKI 303
N+G E + E+ E + +G + ++ + + + R +++ K+ W K
Sbjct: 238 VYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRYAINAEKMKNEFDWEPKY 297
Query: 304 ELRDGLADTYKWYLEN 319
GL +T +WY +N
Sbjct: 298 TFEQGLQETVQWYEKN 313
Score = 39 (18.8 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 19 IFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIV 74
I V G G +GS V +L T ++ A ++V+S + P+Y V
Sbjct: 3 ILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSI--QDHPNYYFV 56
>TAIR|locus:2081675 [details] [associations]
symbol:AUD1 "AT3G62830" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0042732 "D-xylose metabolic process"
evidence=IDA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IDA] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005886 EMBL:CP002686 GO:GO:0000139
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005768
EMBL:AL162651 GO:GO:0005802 GO:GO:0042732 GO:GO:0008460
GO:GO:0019305 GO:GO:0048040 OMA:FSEALIM UniGene:At.23561
UniGene:At.27002 UniGene:At.63633 EMBL:AY143897 IPI:IPI00539694
PIR:T48072 RefSeq:NP_001118893.1 RefSeq:NP_191842.1
ProteinModelPortal:Q9LZI2 SMR:Q9LZI2 PRIDE:Q9LZI2
EnsemblPlants:AT3G62830.1 EnsemblPlants:AT3G62830.2 GeneID:825458
KEGG:ath:AT3G62830 TAIR:At3g62830 InParanoid:Q9LZI2
PhylomeDB:Q9LZI2 ProtClustDB:PLN02206 Genevestigator:Q9LZI2
Uniprot:Q9LZI2
Length = 445
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 78/330 (23%), Positives = 131/330 (39%)
Query: 12 LSEKSAKIFVAGHRGLVGSAIVRKLLSLG---------FT----NLLLR-THAELDLTRQ 57
L K ++ V G G VGS +V +L++ G FT N++ ++ ++ R
Sbjct: 114 LKRKGLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRH 173
Query: 58 SDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLF 117
VE Y + A +H P + I N+ N++ A R G + LL
Sbjct: 174 DVVEPILLEVDQIYHLACPASP--VHYKFN-PVKTIKTNVVGTLNMLGLAKRVGARFLL- 229
Query: 118 LGSSCIYPKFAPQPIPENALLTGPLEP--TNEWYAIAKIAGIKMCQAYQIQYKFNAISGM 175
+S +Y P P+ G + P Y K + Y
Sbjct: 230 TSTSEVYGD--PLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIAR 287
Query: 176 PTNLYGPN---DNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLAD 232
N YGP D+ ++ V AL + + + V+G G R F V DL +
Sbjct: 288 IFNTYGPRMCIDDGRVVSNFVAQALRK----------EPLTVYGDGKQTRSFQFVSDLVE 337
Query: 233 AVVFMMD-EYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDS 291
++ +M+ E+ G N+G+ E ++ ELA+ V+E + + + + D ++ D
Sbjct: 338 GLMRLMEGEHVG--PFNLGNPGEFTMLELAKVVQETIDPNANIEFRPNTEDDPHKRKPDI 395
Query: 292 SKLARL-GWRAKIELRDGLADTYKWYLENV 320
+K L GW K+ LR GL K + + V
Sbjct: 396 TKAKELLGWEPKVSLRQGLPLMVKDFRQRV 425
>UNIPROTKB|B0RVL0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:509169
"Xanthomonas campestris pv. campestris str. B100" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AM920689 GenomeReviews:AM920689_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:AF204145
RefSeq:YP_001905139.1 ProteinModelPortal:B0RVL0 SMR:B0RVL0
STRING:B0RVL0 GeneID:6324993 KEGG:xca:xccb100_3734 PATRIC:24087420
OMA:GFIASHM ProtClustDB:CLSK445958 Uniprot:B0RVL0
Length = 351
Score = 137 (53.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 50/193 (25%), Positives = 87/193 (45%)
Query: 139 TGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFH-PENSHVLPAL 197
T P P N Y+ +K A + +A+ Y ++ +N YGP +H PE ++P +
Sbjct: 149 TTPYAP-NSPYSASKAASDHLVRAFHHTYGLPVLTTNCSNNYGP---YHFPEK--LIPLV 202
Query: 198 MRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVSI 257
+ AK + + V+G G +R++L V D +A+ ++ + E NVG E
Sbjct: 203 I-----AKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGRVGETYNVGGNSERQN 257
Query: 258 KELAEWV----------KEAVGFEGELVWDSSKPDGTPRKLMDSSKLA-RLGWRAKIELR 306
E+ + + ++ E ++ + + +P R +D+SKL LGW
Sbjct: 258 IEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHDRRYAIDASKLKDELGWEPAYTFE 317
Query: 307 DGLADTYKWYLEN 319
G+A T WYL N
Sbjct: 318 QGIALTVDWYLTN 330
>UNIPROTKB|Q8E8H8 [details] [associations]
symbol:wcvA "UDP-glucuronate 4-epimerase WcvA"
species:211586 "Shewanella oneidensis MR-1" [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 105 (42.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 47/210 (22%), Positives = 85/210 (40%)
Query: 32 IVRKLLSLGFTNLLLRTH-AELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPA 90
+ KL L L H +LDL + + FA + VI AA+ G + + P
Sbjct: 39 VALKLARLAPLEALSNFHFIKLDLADREGIAKLFAQQGFQRVIHLAAQAG-VRYSLDNPL 97
Query: 91 EFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYA 150
+ NL +++ + ++ L++ SS +Y P + P+ YA
Sbjct: 98 AYADSNLVGHLTILEGCRHHKIEHLVYASSSSVYGLNQKMPFSTEDSVDHPIS----LYA 153
Query: 151 IAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAK 210
K A M Y Y+ +YGP P+ AL + F +A + G +
Sbjct: 154 ATKKANELMSHTYSHLYQLPTTGLRFFTVYGPWGR--PDM-----ALFK-FTKAILAG-E 204
Query: 211 EVVVWGTGSPLREFLHVDDLADAVVFMMDE 240
+ V+ G R+F ++DD+ + ++ + D+
Sbjct: 205 TIDVYNHGDLSRDFTYIDDIVEGIIRVQDK 234
Score = 73 (30.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 15/70 (21%), Positives = 36/70 (51%)
Query: 248 NVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLAR-LGWRAKIELR 306
N+G+G V + + ++ A+G E + + +P D+ L + +G+++++++
Sbjct: 260 NIGNGSPVQLLDFITALERALGIEAKKQFLPMQPGDVHATWADTEDLFKAVGYKSQVDID 319
Query: 307 DGLADTYKWY 316
G+A WY
Sbjct: 320 TGVAKFVDWY 329
>TIGR_CMR|SO_4686 [details] [associations]
symbol:SO_4686 "NAD dependent epimerase/dehydratase family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 105 (42.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 47/210 (22%), Positives = 85/210 (40%)
Query: 32 IVRKLLSLGFTNLLLRTH-AELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPA 90
+ KL L L H +LDL + + FA + VI AA+ G + + P
Sbjct: 39 VALKLARLAPLEALSNFHFIKLDLADREGIAKLFAQQGFQRVIHLAAQAG-VRYSLDNPL 97
Query: 91 EFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYA 150
+ NL +++ + ++ L++ SS +Y P + P+ YA
Sbjct: 98 AYADSNLVGHLTILEGCRHHKIEHLVYASSSSVYGLNQKMPFSTEDSVDHPIS----LYA 153
Query: 151 IAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAK 210
K A M Y Y+ +YGP P+ AL + F +A + G +
Sbjct: 154 ATKKANELMSHTYSHLYQLPTTGLRFFTVYGPWGR--PDM-----ALFK-FTKAILAG-E 204
Query: 211 EVVVWGTGSPLREFLHVDDLADAVVFMMDE 240
+ V+ G R+F ++DD+ + ++ + D+
Sbjct: 205 TIDVYNHGDLSRDFTYIDDIVEGIIRVQDK 234
Score = 73 (30.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 15/70 (21%), Positives = 36/70 (51%)
Query: 248 NVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLAR-LGWRAKIELR 306
N+G+G V + + ++ A+G E + + +P D+ L + +G+++++++
Sbjct: 260 NIGNGSPVQLLDFITALERALGIEAKKQFLPMQPGDVHATWADTEDLFKAVGYKSQVDID 319
Query: 307 DGLADTYKWY 316
G+A WY
Sbjct: 320 TGVAKFVDWY 329
>FB|FBgn0035147 [details] [associations]
symbol:Gale "UDP-galactose 4'-epimerase" species:7227
"Drosophila melanogaster" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS;IMP;NAS] [GO:0006012 "galactose metabolic
process" evidence=IMP;NAS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 EMBL:AE014296 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AY058582
RefSeq:NP_001246537.1 RefSeq:NP_612044.1 UniGene:Dm.4155
ProteinModelPortal:Q9W0P5 SMR:Q9W0P5 DIP:DIP-20343N IntAct:Q9W0P5
MINT:MINT-914196 STRING:Q9W0P5 PaxDb:Q9W0P5 PRIDE:Q9W0P5
EnsemblMetazoa:FBtr0072556 EnsemblMetazoa:FBtr0306917 GeneID:38076
KEGG:dme:Dmel_CG12030 UCSC:CG12030-RA CTD:2582 FlyBase:FBgn0035147
InParanoid:Q9W0P5 OrthoDB:EOG473N6Z PhylomeDB:Q9W0P5
GenomeRNAi:38076 NextBio:806870 Bgee:Q9W0P5 GermOnline:CG12030
Uniprot:Q9W0P5
Length = 350
Score = 131 (51.2 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 68/285 (23%), Positives = 120/285 (42%)
Query: 52 LDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFR-Y 110
+D+T + V S F K V AA + + + P ++ N+ TNV+ A
Sbjct: 66 VDITDREQVRSVFQEHKIDMVAHFAA-LKAVGESCRIPLQYYHNNMT-GTNVLLEAMADN 123
Query: 111 GVKKLLFLGSSCIY--PKFAP--QPIPENALLTGPLEPTNEWYA-IAK--IAGIKMCQAY 163
V K ++ S+ +Y PKF P + P T P T + I K K
Sbjct: 124 NVFKFVYSSSATVYGEPKFLPVTEEHPTGNC-TSPYGKTKYFTEEILKDLCKSDKRWAVV 182
Query: 164 QIQYKFNAISGMPTNLYGPNDNFHPEN--SHVLPALMRRFHEAKVNGAKEVVVWGTGSPL 221
++Y FN + + G + N P N ++ + R V G+ GTG +
Sbjct: 183 SLRY-FNPVGAHISGRIGEDPNGEPNNLMPYIAQVAVGRRPSLSVYGSDFPTHDGTG--V 239
Query: 222 REFLHVDDLADAVVFMMDEY-----DGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVW 276
R+++H+ DLA+ V +D+ G N+G+G S+ ++ + ++A G +
Sbjct: 240 RDYIHIVDLAEGHVKALDKLRNIAETGFFAYNLGTGVGYSVLDMVKAFEKASGKKVNYTL 299
Query: 277 DSSKPDGTPRKLMDSSKLA--RLGWRAKIELRDGLADTYKWYLEN 319
+ D++ LA +LGW+A+ + DT++W +N
Sbjct: 300 VDRRSGDVATCYADAT-LADKKLGWKAERGIDKMCEDTWRWQSQN 343
Score = 43 (20.2 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 19 IFVAGHRGLVGSAIVRKLLSLGF 41
+ V G G +GS V ++L+ G+
Sbjct: 6 VLVTGGAGYIGSHTVLEMLNAGY 28
>UNIPROTKB|Q489C2 [details] [associations]
symbol:CPS_0592 "Capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 100 (40.3 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 57/245 (23%), Positives = 98/245 (40%)
Query: 18 KIFVAGHRGLVGSAIVRKLLS-----LGFTNL------------LLRT-HA-----ELDL 54
K V G G +GSA+V +L + +G N+ L R HA ++D+
Sbjct: 2 KYLVTGAAGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMDI 61
Query: 55 TRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKK 114
++ + F A++ V+ AA+ G + + P + NL NV++ VK
Sbjct: 62 ADRNVMAELFTAQQFDKVVHLAAQAG-VRYSIENPMAYADSNLIGHLNVLEGCRNNQVKH 120
Query: 115 LLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISG 174
L++ SS +Y P + P+ YA K + M +Y Y
Sbjct: 121 LIYASSSSVYGLNNKVPFSTKDTVDHPVS----LYAATKKSNELMAHSYSHLYNIPTTGL 176
Query: 175 MPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAV 234
+YG P+ + P + F + +NG + + G R+F HVDD+ + V
Sbjct: 177 RFFTVYGSWGR--PD---MAPYI---FTKKILNG-DTIDINNNGDMWRDFTHVDDIVEGV 227
Query: 235 VFMMD 239
+ + D
Sbjct: 228 IRIAD 232
Score = 75 (31.5 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 15/75 (20%), Positives = 38/75 (50%)
Query: 248 NVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARL-GWRAKIELR 306
N+G G +S+ + + +++ +G E + + +P + D+ L + + KI ++
Sbjct: 259 NIGHGSPISLMDFVKAIEDELGIEAKKNFREMQPGDVYQTYADTQDLFKATNYVPKISVK 318
Query: 307 DGLADTYKWYLENVK 321
+G+A+ W+ + K
Sbjct: 319 EGVAELVVWFKDFYK 333
>TIGR_CMR|CPS_0592 [details] [associations]
symbol:CPS_0592 "capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 100 (40.3 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 57/245 (23%), Positives = 98/245 (40%)
Query: 18 KIFVAGHRGLVGSAIVRKLLS-----LGFTNL------------LLRT-HA-----ELDL 54
K V G G +GSA+V +L + +G N+ L R HA ++D+
Sbjct: 2 KYLVTGAAGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMDI 61
Query: 55 TRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKK 114
++ + F A++ V+ AA+ G + + P + NL NV++ VK
Sbjct: 62 ADRNVMAELFTAQQFDKVVHLAAQAG-VRYSIENPMAYADSNLIGHLNVLEGCRNNQVKH 120
Query: 115 LLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISG 174
L++ SS +Y P + P+ YA K + M +Y Y
Sbjct: 121 LIYASSSSVYGLNNKVPFSTKDTVDHPVS----LYAATKKSNELMAHSYSHLYNIPTTGL 176
Query: 175 MPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAV 234
+YG P+ + P + F + +NG + + G R+F HVDD+ + V
Sbjct: 177 RFFTVYGSWGR--PD---MAPYI---FTKKILNG-DTIDINNNGDMWRDFTHVDDIVEGV 227
Query: 235 VFMMD 239
+ + D
Sbjct: 228 IRIAD 232
Score = 75 (31.5 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 15/75 (20%), Positives = 38/75 (50%)
Query: 248 NVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARL-GWRAKIELR 306
N+G G +S+ + + +++ +G E + + +P + D+ L + + KI ++
Sbjct: 259 NIGHGSPISLMDFVKAIEDELGIEAKKNFREMQPGDVYQTYADTQDLFKATNYVPKISVK 318
Query: 307 DGLADTYKWYLENVK 321
+G+A+ W+ + K
Sbjct: 319 EGVAELVVWFKDFYK 333
>TIGR_CMR|SO_4174 [details] [associations]
symbol:SO_4174 "NAD dependent epimerase/dehydratase family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR005913 Pfam:PF04321
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000227713 OMA:MTKYQML
GO:GO:0008831 GO:GO:0045226 RefSeq:NP_719703.1
ProteinModelPortal:Q8E9T9 GeneID:1171780 KEGG:son:SO_4174
PATRIC:23527976 ProtClustDB:CLSK907528 Uniprot:Q8E9T9
Length = 306
Score = 132 (51.5 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 50/172 (29%), Positives = 85/172 (49%)
Query: 17 AKIFVAGHRGLVGSAIVRKL-------LSLGFTNLLLRTHAELDLTRQSDVESFFAAEKP 69
A I V G GL+G A+V++L ++ GF+ H +LDLT+ VE+F A E+P
Sbjct: 2 ANIMVTGATGLLGRAVVKQLTAAGHRVIATGFSCAEANIH-KLDLTQAIAVEAFIARERP 60
Query: 70 SYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAP 129
++ AA+ + P + +A+NL + +A ++G LL++ + ++ P
Sbjct: 61 EVIVHCAAERRP-DVSEQSPEQALALNLSASQTLAKAAKQHGAW-LLYISTDYVFDGTTP 118
Query: 130 QPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYG 181
P E+A P P N +Y +K+ G + C +F A+ +P LYG
Sbjct: 119 -PYAEDA---AP-NPVN-FYGESKLQG-ETC-VLNTDSRF-AVLRLPI-LYG 160
>UNIPROTKB|O53634 [details] [associations]
symbol:gca "POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA
(GDP-D-MANNOSE DEHYDRATASE)" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR001509 InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061
InterPro:IPR016040 GO:GO:0040007 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
GO:GO:0055114 KO:K01711 GO:GO:0008446 HOGENOM:HOG000167992
HSSP:P32054 EMBL:CP003248 PIR:C70840 RefSeq:NP_214626.1
RefSeq:NP_334530.1 RefSeq:YP_006513430.1 SMR:O53634 DNASU:886907
EnsemblBacteria:EBMYCT00000003264 EnsemblBacteria:EBMYCT00000070103
GeneID:13316094 GeneID:886907 GeneID:922974 KEGG:mtc:MT0121
KEGG:mtu:Rv0112 KEGG:mtv:RVBD_0112 PATRIC:18121990
TubercuList:Rv0112 OMA:CSGVATR ProtClustDB:CLSK790272
Uniprot:O53634
Length = 318
Score = 130 (50.8 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 76/320 (23%), Positives = 132/320 (41%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLG---FTNLLLRT---------HAELDLTRQSDVESFFA 65
K+++ G G++GS + LL+ G + T AE+D+T V A
Sbjct: 2 KVWITGAGGMMGSHLAEMLLAAGHDVYATYCRPTIDPSDLQFNGAEVDITDWCSVYDSIA 61
Query: 66 AEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVK---KLLFLGSSC 122
+P V AA+ + P E + N+ + T ++ A R V+ K++ GSS
Sbjct: 62 TFRPDAVFHLAAQSYPA-VSWARPVETLTTNM-VGTAIVFEALRR-VRPHAKIIVAGSSA 118
Query: 123 IYPKFAPQPIPENALLT-GPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYG 181
Y P +P N PL P Y ++K A + Y Y + + N G
Sbjct: 119 EYGFVDPSEVPINERRELRPLHP----YGVSKAATDMLAYQYHKSYGMHTVVARIFNCTG 174
Query: 182 PNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEY 241
P + L +RR + + + + G R + V DL A++ M+D+
Sbjct: 175 PR-----KVGDALSDFVRRCTWLEHHPEQSAIRVGNLKTKRTIVDVRDLNRALMLMLDKG 229
Query: 242 DGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELV--WDSSKPDGTPRKLM--DSSKLARL 297
+ NVG + ++ + V A + ++V D + T K++ D SKLA +
Sbjct: 230 EAGADYNVGGSIAYEMGDVLKQVIAACKRD-DIVPEVDPALLRPTDEKIIYGDCSKLAAI 288
Query: 298 -GWRAKIELRDGLADTYKWY 316
GW+ +I L +AD + ++
Sbjct: 289 TGWQQEICLTQTIADMFDYW 308
>TIGR_CMR|GSU_2366 [details] [associations]
symbol:GSU_2366 "dTDP-glucose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 HSSP:P26391 OMA:IQYVKDR RefSeq:NP_953413.1
ProteinModelPortal:Q74AI8 SMR:Q74AI8 GeneID:2686639
KEGG:gsu:GSU2366 PATRIC:22027581 ProtClustDB:CLSK828808
BioCyc:GSUL243231:GH27-2368-MONOMER Uniprot:Q74AI8
Length = 358
Score = 130 (50.8 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 51/189 (26%), Positives = 85/189 (44%)
Query: 141 PLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRR 200
PL P N Y+ +K + +AY + ++ +N YGP F PE ++P ++
Sbjct: 156 PLAP-NSPYSASKAGSDLLVRAYNETFGLPVLTTRCSNNYGPFQ-F-PEK--LIPLMIHN 210
Query: 201 FHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKE---VSI 257
V G K + V+G G +R++LHV D + A+ ++ E NVG E + I
Sbjct: 211 I----VAG-KPLPVYGDGRNVRDWLHVKDHSTAIETVLKGGKPGEVFNVGGNNEWFNIDI 265
Query: 258 KEL-AEWVKEAVG-----FEGELVWDSSKPDGTPRKLMDSSKLAR-LGWRAKIELRDGLA 310
L + + E +G G + + + R + ++K+ R LGW G+A
Sbjct: 266 VHLLCDLLDERLGRPGGESRGLITFVKDRLGHDRRYAISAAKIKRELGWEPSYTFERGIA 325
Query: 311 DTYKWYLEN 319
+T WYL N
Sbjct: 326 ETVDWYLAN 334
>RGD|621493 [details] [associations]
symbol:Gale "UDP-galactose-4-epimerase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;ISO]
[GO:0006012 "galactose metabolic process" evidence=IEA;ISO]
[GO:0019388 "galactose catabolic process" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 HOVERGEN:HBG001396
OrthoDB:EOG4B5P5D EMBL:X53949 IPI:IPI00193573 PIR:S11223
UniGene:Rn.29908 ProteinModelPortal:P18645 SMR:P18645 STRING:P18645
PRIDE:P18645 InParanoid:P18645 ArrayExpress:P18645
Genevestigator:P18645 GermOnline:ENSRNOG00000009712 Uniprot:P18645
Length = 347
Score = 114 (45.2 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 65/283 (22%), Positives = 115/283 (40%)
Query: 51 ELDLTRQSDVESFFAAEKPSYVI-VAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFR 109
E+D+ Q+ ++ F VI A K G P ++ +NL +++
Sbjct: 64 EMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQK--PLDYYRVNLTGTIQLLEIMRA 121
Query: 110 YGVKKLLFLGSSCIYPKFAPQPI--PENALLTGPLEPTNEWYA--IAKIAGIKMC-QAYQ 164
GVK L+F S+ +Y K P P + T P + + I + A
Sbjct: 122 MGVKSLVFSSSATVYGKPVPASGRGPPHRGCTKPYGKSKFFIEEMIQDLCRADTAWNAVL 181
Query: 165 IQYKFNAISGMPTNLYGPNDNFHPEN--SHVLPALMRRFHEAKVNGAKEVVVWGTGSPLR 222
++Y F I + G + P N +V + R V G GTG +R
Sbjct: 182 LRY-FIPIGAHRSARIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTG--VR 238
Query: 223 EFLHVDDLAD---AVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDS- 278
+++HV DLA A + + E G N+G+G S+ ++ + +++A G ++ +
Sbjct: 239 DYIHVVDLAKGHIAALKKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASG--KKIPYKVV 296
Query: 279 SKPDGTPRKLMDSSKLAR--LGWRAKIELRDGLADTYKWYLEN 319
++ +G + LA LGW A + L D ++W +N
Sbjct: 297 ARREGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRWQKQN 339
Score = 52 (23.4 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFTNLLL 46
K+ V G G +GS V +LL G++ +++
Sbjct: 4 KVLVTGGAGYIGSHTVLELLEAGYSPVVI 32
>TIGR_CMR|GSU_2241 [details] [associations]
symbol:GSU_2241 "capsular polysaccharide biosynthesis
protein I" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:NP_953290.1
ProteinModelPortal:Q74AV9 GeneID:2687517 KEGG:gsu:GSU2241
PATRIC:22027337 ProtClustDB:CLSK746800
BioCyc:GSUL243231:GH27-2213-MONOMER Uniprot:Q74AV9
Length = 336
Score = 125 (49.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 46/180 (25%), Positives = 78/180 (43%)
Query: 60 VESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLG 119
+E FA ++ V+ AA+ G + + T P ++ NL N+++ +GVK L++
Sbjct: 69 LEDLFAGQRFDVVVNLAAQAG-VRYSITNPHAYVDSNLVGFINILEGCRHHGVKHLVYAS 127
Query: 120 SSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNL 179
SS +Y P + + P+ YA K A M Y Y +
Sbjct: 128 SSSVYGANTAMPFSIHHNVDHPVS----LYAATKKANELMAHTYSSLYGLPTTGLRFFTV 183
Query: 180 YGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMD 239
YGP P+ + L F +A + G + + V+ G R+F +VDD+ + V +MD
Sbjct: 184 YGPWGR--PDMALFL------FTKAILEG-RPIDVYNFGKMQRDFTYVDDIVEGVTRVMD 234
>UNIPROTKB|Q83DM2 [details] [associations]
symbol:CBU_0681 "NAD dependent epimerase/dehydratase
family" species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 RefSeq:NP_819711.1
ProteinModelPortal:Q83DM2 GeneID:1208570 KEGG:cbu:CBU_0681
PATRIC:17930045 HOGENOM:HOG000026895 OMA:VSKISHR
ProtClustDB:CLSK914235 BioCyc:CBUR227377:GJ7S-679-MONOMER
Uniprot:Q83DM2
Length = 301
Score = 122 (48.0 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 38/170 (22%), Positives = 85/170 (50%)
Query: 96 NLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIA 155
N+++ V + + +++++++ S +Y + QP+ E ++ PT+ + + +A
Sbjct: 85 NVRMMNVVCEVLQKQAIQQVIYISSDAVYAD-SDQPLTETSVTA----PTS-LHGVMHLA 138
Query: 156 GIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVW 215
M Q+ + + P+ LYG D P N + P RR + + ++++
Sbjct: 139 REMMLQSVCSENNISLAILRPSLLYGAED---PHNGYG-PNRFRRL----ADNHESIILF 190
Query: 216 GTGSPLREFLHVDDLADAVVFMMDEYD-GLEHLNVGSGKEVSIKELAEWV 264
G G R+ +++DD+A+ + ++ G+ LN+ +G+ +S K+LAE V
Sbjct: 191 GEGEEQRDHVYIDDVAEIITRVIQRCSRGV--LNIATGQVISFKQLAEKV 238
>TIGR_CMR|CBU_0681 [details] [associations]
symbol:CBU_0681 "conserved hypothetical protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 RefSeq:NP_819711.1
ProteinModelPortal:Q83DM2 GeneID:1208570 KEGG:cbu:CBU_0681
PATRIC:17930045 HOGENOM:HOG000026895 OMA:VSKISHR
ProtClustDB:CLSK914235 BioCyc:CBUR227377:GJ7S-679-MONOMER
Uniprot:Q83DM2
Length = 301
Score = 122 (48.0 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 38/170 (22%), Positives = 85/170 (50%)
Query: 96 NLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIA 155
N+++ V + + +++++++ S +Y + QP+ E ++ PT+ + + +A
Sbjct: 85 NVRMMNVVCEVLQKQAIQQVIYISSDAVYAD-SDQPLTETSVTA----PTS-LHGVMHLA 138
Query: 156 GIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVW 215
M Q+ + + P+ LYG D P N + P RR + + ++++
Sbjct: 139 REMMLQSVCSENNISLAILRPSLLYGAED---PHNGYG-PNRFRRL----ADNHESIILF 190
Query: 216 GTGSPLREFLHVDDLADAVVFMMDEYD-GLEHLNVGSGKEVSIKELAEWV 264
G G R+ +++DD+A+ + ++ G+ LN+ +G+ +S K+LAE V
Sbjct: 191 GEGEEQRDHVYIDDVAEIITRVIQRCSRGV--LNIATGQVISFKQLAEKV 238
>TAIR|locus:2204639 [details] [associations]
symbol:MUR4 "MURUS 4" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISM;IDA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019567 "arabinose biosynthetic process" evidence=IMP]
[GO:0050373 "UDP-arabinose 4-epimerase activity" evidence=IDA]
[GO:0009723 "response to ethylene stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0052542 "defense response by callose deposition"
evidence=RCA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
GO:GO:0045227 GO:GO:0009832 EMBL:AY195742 EMBL:AF083751
EMBL:AC007060 EMBL:AY064973 EMBL:BT002614 EMBL:AF325108
EMBL:AK220800 IPI:IPI00521995 PIR:E86431 RefSeq:NP_001031118.1
RefSeq:NP_174350.2 UniGene:At.20201 ProteinModelPortal:Q9SA77
SMR:Q9SA77 STRING:Q9SA77 PaxDb:Q9SA77 PRIDE:Q9SA77
EnsemblPlants:AT1G30620.1 EnsemblPlants:AT1G30620.2 GeneID:839942
KEGG:ath:AT1G30620 TAIR:At1g30620 eggNOG:COG1087
HOGENOM:HOG000168001 InParanoid:Q9SA77 KO:K12448 OMA:SHPNGYN
PhylomeDB:Q9SA77 ProtClustDB:CLSN2686084
BioCyc:MetaCyc:AT1G30620-MONOMER Genevestigator:Q9SA77
GermOnline:AT1G30620 GO:GO:0050373 GO:GO:0003978 GO:GO:0019567
GO:GO:0006012 GO:GO:0033358 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Uniprot:Q9SA77
Length = 419
Score = 124 (48.7 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 66/277 (23%), Positives = 110/277 (39%)
Query: 53 DLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVI-DSAFRYG 111
DL V F E ++ A V + + +P ++ N+ T V+ ++ +G
Sbjct: 130 DLGDAKAVNKIFT-ENAFDAVMHFAAVAYVGESTQFPLKYYH-NITSNTLVVLETMAAHG 187
Query: 112 VKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQ----AYQIQY 167
VK L++ + Y + PI E P+ P + +A+ + + A I
Sbjct: 188 VKTLIYSSTCATYGEPDIMPITEETPQV-PINPYGKAKKMAEDIILDFSKNSDMAVMILR 246
Query: 168 KFNAISGMPTNLYG----PNDNFHPENSHVLPALMRRFHEA-KVNGAKEVVVWGTGSPLR 222
FN I P G P H S R ++ G GT +R
Sbjct: 247 YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQIKGTDYKTADGTC--VR 304
Query: 223 EFLHVDDLADAVVFMMDEYDGLEH--LNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSK 280
+++ V DL DA V + + + NVG+GK S+KE E K+A G E ++ + +
Sbjct: 305 DYIDVTDLVDAHVKALQKAKPRKVGIYNVGTGKGSSVKEFVEACKKATGVEIKIDYLPRR 364
Query: 281 PDGTPRKLMDSSKLAR-LGWRAK-IELRDGLADTYKW 315
D SK+ + L W AK L++ L ++W
Sbjct: 365 AGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRW 401
>TIGR_CMR|SO_3167 [details] [associations]
symbol:SO_3167 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:NP_718723.1 ProteinModelPortal:Q8ECH5
SMR:Q8ECH5 GeneID:1170861 KEGG:son:SO_3167 PATRIC:23526018
OMA:IDLIIHK ProtClustDB:CLSK907039 Uniprot:Q8ECH5
Length = 343
Score = 93 (37.8 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 59/264 (22%), Positives = 109/264 (41%)
Query: 18 KIFVAGHRGLVGSAIVRKLLS------LGFTNLLLRTHAE-----LDLTR----QSDV-- 60
+I V G G +GSA+VR L+ L F L +H E D R Q+D+
Sbjct: 2 RILVTGGAGFIGSALVRMLIEQTESVVLNFDKLTYASHPESLAGVADNERYHFVQADICD 61
Query: 61 ----ESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRY----GV 112
E +P ++ AA+ + + PAEFI N+ ++++ Y G
Sbjct: 62 RARLEQVLQQFQPDLMMHLAAE-SHVDRSIDGPAEFIQTNIVGTYTLLEACRSYYQTLGQ 120
Query: 113 KKLLFLGSSCIYPKFAPQPIPENALL--TGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFN 170
+ I + E L T +P++ Y+ +K + + +A+ Y
Sbjct: 121 AQQRRFRLHHISTDEVFGSLTETGLFSETSAYDPSSP-YSASKASADHLVRAWHRTYALP 179
Query: 171 AISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDL 230
+ +N YGP +PE ++P ++ ++K + ++G G +R++L+VDD
Sbjct: 180 IVITNCSNNYGPFQ--YPEK--LIPLMVSNALQSK-----PLPIYGNGQQVRDWLYVDDH 230
Query: 231 ADAVVFMMDEYDGLEHLNVGSGKE 254
A+ + + + N+G E
Sbjct: 231 VKALYLVATQGQLGQTYNIGGSCE 254
Score = 71 (30.1 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 269 GFEGELVWDSSKPDGTPRKLMDSSKLAR-LGWRAKIELRDGLADTYKWYL 317
GF + + +P R +D+SK+ R LGWR + GL T +W +
Sbjct: 285 GFADLIQYVVDRPGHDVRYAIDASKIQRELGWRPQESFESGLRKTVEWII 334
>UNIPROTKB|P09147 [details] [associations]
symbol:galE species:83333 "Escherichia coli K-12"
[GO:0006012 "galactose metabolic process" evidence=IDA;IMP]
[GO:0005975 "carbohydrate metabolic process" evidence=IMP]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0070403 "NAD+ binding" evidence=IDA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA;IDA] [GO:0009242 "colanic acid
biosynthetic process" evidence=IEP;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 Gene3D:3.40.50.720 GO:GO:0070403
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 GO:GO:0009242
GO:GO:0033499 EMBL:X06226 OMA:THAPIDA EMBL:X51449 EMBL:U07867
EMBL:J01613 PIR:S02089 RefSeq:NP_415280.3 RefSeq:YP_489032.1
PDB:1A9Y PDB:1A9Z PDB:1KVQ PDB:1KVR PDB:1KVS PDB:1KVT PDB:1KVU
PDB:1LRJ PDB:1LRK PDB:1LRL PDB:1NAH PDB:1NAI PDB:1UDA PDB:1UDB
PDB:1UDC PDB:1XEL PDB:2UDP PDBsum:1A9Y PDBsum:1A9Z PDBsum:1KVQ
PDBsum:1KVR PDBsum:1KVS PDBsum:1KVT PDBsum:1KVU PDBsum:1LRJ
PDBsum:1LRK PDBsum:1LRL PDBsum:1NAH PDBsum:1NAI PDBsum:1UDA
PDBsum:1UDB PDBsum:1UDC PDBsum:1XEL PDBsum:2UDP
ProteinModelPortal:P09147 SMR:P09147 DIP:DIP-9728N IntAct:P09147
SWISS-2DPAGE:P09147 PRIDE:P09147 EnsemblBacteria:EBESCT00000004431
EnsemblBacteria:EBESCT00000004432 EnsemblBacteria:EBESCT00000004433
EnsemblBacteria:EBESCT00000014770 GeneID:12932906 GeneID:945354
KEGG:ecj:Y75_p0732 KEGG:eco:b0759 PATRIC:32116719 EchoBASE:EB0357
EcoGene:EG10362 ProtClustDB:PRK10675
BioCyc:EcoCyc:UDPGLUCEPIM-MONOMER BioCyc:ECOL316407:JW0742-MONOMER
BioCyc:MetaCyc:UDPGLUCEPIM-MONOMER SABIO-RK:P09147
EvolutionaryTrace:P09147 Genevestigator:P09147 Uniprot:P09147
Length = 338
Score = 121 (47.7 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 55/239 (23%), Positives = 96/239 (40%)
Query: 89 PAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEW 148
P E+ N+ +I + VK +F S+ +Y P E+ P P +
Sbjct: 93 PLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKS 152
Query: 149 YAIAK--IAGIKMCQA-YQI---QYKFNAISGMPTNLYGPNDNFHPEN--SHVLPALMRR 200
+ + + ++ Q + I +Y FN + P+ G + P N ++ + R
Sbjct: 153 KLMVEQILTDLQKAQPDWSIALLRY-FNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGR 211
Query: 201 FHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEY---DGLEHLNVGSGKEVSI 257
+ G GTG +R+++HV DLAD V M++ G+ N+G+G S+
Sbjct: 212 RDSLAIFGNDYPTEDGTG--VRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSV 269
Query: 258 KELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLAR-LGWRAKIELRDGLADTYKW 315
++ +A G + + P D+SK R L WR L + DT+ W
Sbjct: 270 LDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHW 328
Score = 38 (18.4 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 18 KIFVAGHRGLVGSAIVRKLLSLGFTNLLL 46
++ V G G +GS +LL G ++L
Sbjct: 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIIL 30
>POMBASE|SPBC365.14c [details] [associations]
symbol:uge1 "UDP-glucose 4-epimerase Uge1" species:4896
"Schizosaccharomyces pombe" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=ISS] [GO:0042125 "protein galactosylation"
evidence=IMP] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00214 InterPro:IPR016040 PomBase:SPBC365.14c
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CU329671
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 HSSP:P04397 OrthoDB:EOG4NKG3T
GO:GO:0033499 GO:GO:0042125 OMA:ADKAWNA PIR:T40321
RefSeq:NP_596043.1 ProteinModelPortal:Q9Y7X5 SMR:Q9Y7X5
STRING:Q9Y7X5 PRIDE:Q9Y7X5 EnsemblFungi:SPBC365.14c.1
GeneID:2540938 KEGG:spo:SPBC365.14c NextBio:20802053 Uniprot:Q9Y7X5
Length = 355
Score = 121 (47.7 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 74/328 (22%), Positives = 136/328 (41%)
Query: 8 SCSFLSEKSAKIFVAGHRGLVGSAI--VRKLLSLGFTNLLLRTHAELDLTRQSDVESFFA 65
+C L EK + + + L S + V ++ L ++ H ++DL + ++ FA
Sbjct: 22 TCVVLLEKGYDVVIVDN--LCNSRVEAVHRIEKLTGKKVIF--H-QVDLLDEPALDKVFA 76
Query: 66 AEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIY- 124
+ S VI A + + + P + N+ N+I+ +Y V+ +F S+ +Y
Sbjct: 77 NQNISAVIHFAG-LKAVGESVQVPLSYYKNNISGTINLIECMKKYNVRDFVFSSSATVYG 135
Query: 125 PKFAPQ---PIPENALLTG--PLEPTNEWYA--IAKIAGI-KMCQAYQIQYKFNAISGMP 176
P PIPE+ G P T + I + K A ++Y FN P
Sbjct: 136 DPTRPGGTIPIPESCPREGTSPYGRTKLFIENIIEDETKVNKSLNAALLRY-FNPGGAHP 194
Query: 177 TNLYGPNDNFHPEN--SHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAV 234
+ G + P N ++ + R V G + G+P+R+++HV DLA+A
Sbjct: 195 SGELGEDPLGIPNNLLPYIAQVAVGRLDHLNVFG--DDYPTSDGTPIRDYIHVCDLAEAH 252
Query: 235 VFMMD----EYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWD-SSKPDGTPRKLM 289
V +D + N+GSG ++ ++ +AVG +L + + + G L
Sbjct: 253 VAALDYLRQHFVSCRPWNLGSGTGSTVFQVLNAFSKAVG--RDLPYKVTPRRAGDVVNLT 310
Query: 290 DSSKLAR--LGWRAKIELRDGLADTYKW 315
+ A L W+ + + DT++W
Sbjct: 311 ANPTRANEELKWKTSRSIYEICVDTWRW 338
>TIGR_CMR|CBU_0844 [details] [associations]
symbol:CBU_0844 "capsular polysaccharide biosynthesis
protein I" species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 HOGENOM:HOG000168000
KO:K08679 OMA:NSAYSAN RefSeq:NP_819864.2 ProteinModelPortal:Q83D94
GeneID:1208737 KEGG:cbu:CBU_0844 PATRIC:17930385
ProtClustDB:CLSK914357 BioCyc:CBUR227377:GJ7S-839-MONOMER
GO:GO:0003974 Uniprot:Q83D94
Length = 339
Score = 115 (45.5 bits), Expect = 0.00044, P = 0.00044
Identities = 58/287 (20%), Positives = 113/287 (39%)
Query: 51 ELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRY 110
+LDL + + F V+ AA+ G + + T P ++ NL ++++
Sbjct: 64 KLDLADRQGMTDLFQKHLFDTVVHLAAQAG-VRYSLTNPYAYVDSNLVGFAHILEGCRHQ 122
Query: 111 GVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFN 170
VK L+F SS +Y P E+ + P+ YA +K A M +Y ++
Sbjct: 123 SVKHLVFASSSSVYGANEKYPFSESDNVDHPIA----LYAASKKANELMAHSYAHLFQLP 178
Query: 171 AISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDL 230
+YGP P+ AL + + K + V+ G R+F ++DD+
Sbjct: 179 CTGLRFFTVYGPWGR--PDM-----ALFKFTRNLLAD--KPIDVYNHGKMSRDFTYIDDI 229
Query: 231 ADAVVFMMDE-------YDGLEH-----------LNVGSGKEVSIKELAEWVKEAVGFEG 272
D ++ +D Y + N+GS + + +++ + +
Sbjct: 230 VDGILLTLDHPPEPNSAYSANQPNPAKSNAPYRIYNIGSNNPILLTNFIAILEKTLNKKA 289
Query: 273 ELVWDSSKPDGTPRKLMDSSKLAR-LGWRAKIELRDGLADTYKWYLE 318
+ +P P D S+L + +R + L+ G+ + +WYL+
Sbjct: 290 IKNFLPLQPGDVPETYADVSQLEKDFQYRPRTPLQKGVKNFVEWYLQ 336
>UNIPROTKB|Q5QPP3 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 TIGRFAMs:TIGR01179 EMBL:AL031295
UniGene:Hs.632380 HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644339
SMR:Q5QPP3 Ensembl:ENST00000418277 Uniprot:Q5QPP3
Length = 227
Score = 111 (44.1 bits), Expect = 0.00050, P = 0.00050
Identities = 58/235 (24%), Positives = 106/235 (45%)
Query: 52 LDLTRQSDVESFFAAEKPSYV-IVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRY 110
+D+ Q ++ F +K S++ ++ A + + + P ++ +NL +++ +
Sbjct: 1 MDILDQGALQRLF--KKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 58
Query: 111 GVKKLLFLGSSCIYPKFAPQPIP-ENALLTGPLEPTNEWYAIAKIAGIKM----CQAYQ- 164
GVK L+F S+ +Y PQ +P + A TG TN Y +K +M CQA +
Sbjct: 59 GVKNLVFSSSATVYGN--PQYLPLDEAHPTGGC--TNP-YGKSKFFIEEMIRDLCQADKT 113
Query: 165 -----IQYKFNAISGMPTNLYGPNDNFHPEN--SHVLPALMRRFHEAKVNGAKEVVVWGT 217
++Y FN + G + P N +V + R V G GT
Sbjct: 114 WNAVLLRY-FNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT 172
Query: 218 GSPLREFLHVDDLAD---AVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVG 269
G +R+++HV DLA A + + E G N+G+G S+ ++ + +++A G
Sbjct: 173 G--VRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASG 225
>CGD|CAL0000448 [details] [associations]
symbol:GAL10 species:5476 "Candida albicans" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0019388
"galactose catabolic process" evidence=IEP;IGI;IMP] [GO:0001403
"invasive growth in response to glucose limitation" evidence=IMP]
[GO:0009272 "fungal-type cell wall biogenesis" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0042149 "cellular response to glucose starvation" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0060257 "negative regulation of
flocculation" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IEA] [GO:0042125 "protein galactosylation"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000448
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0034599
GO:GO:0030246 GO:GO:0042149 GO:GO:0009272 GO:GO:0044237
SUPFAM:SSF74650 GO:GO:0001403 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AACQ01000118 EMBL:AACQ01000119 Gene3D:2.70.98.10 GO:GO:0019388
GO:GO:0060257 GO:GO:1900429 eggNOG:COG2017 KO:K15917
RefSeq:XP_713732.1 RefSeq:XP_713766.1 ProteinModelPortal:Q59VY6
SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583 GeneID:3644609
KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672 Uniprot:Q59VY6
Length = 675
Score = 116 (45.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 56/214 (26%), Positives = 98/214 (45%)
Query: 131 PIPENALLTGPLEPTNEW----YAIAKIAG--IKMCQAYQI---QYKFNAISGMPTNLYG 181
PIPE+ P++PTN + + I I A+++ +Y FN I P+ L G
Sbjct: 144 PIPEHC----PMDPTNPYGRTKFIIESILKDIYNSDDAWKVAILRY-FNPIGAHPSGLLG 198
Query: 182 PNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGT------GSPLREFLHVDDLAD--- 232
+ P N +LP L + + +++ ++G G+P+R+++HV DLA
Sbjct: 199 EDPLGIPNN--LLPYLA----QVAIGRREKLSIFGNDYNSRDGTPIRDYIHVVDLAKGHI 252
Query: 233 -AVVFMMD-EYDGL-EHLNVGSGKEVSIKELAEWVKEAVGFE--GELVWDSSKPDGTPRK 287
A+ ++ + + GL N+G+GK ++ E+ + VG E E+V + G
Sbjct: 253 AALAYLKNLQSKGLYREWNLGTGKGSTVFEVYHAFSKVVGRELPHEVV---GRRAGDVLD 309
Query: 288 LMDSSKLAR--LGWRAKIELRDGLADTYKWYLEN 319
L A L W+ ++ + D D +KW EN
Sbjct: 310 LTAKPDRANKELQWKTELTIDDACKDLWKWTTEN 343
Score = 45 (20.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 13/53 (24%), Positives = 23/53 (43%)
Query: 19 IFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSY 71
I V G G +GS V +L+S G+ +++ + + +E P Y
Sbjct: 6 ILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAVARIEFIVKQHVPFY 58
>UNIPROTKB|Q59VY6 [details] [associations]
symbol:GAL10 "Putative uncharacterized protein GAL10"
species:237561 "Candida albicans SC5314" [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0019388
"galactose catabolic process" evidence=IGI;IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0034599 "cellular response
to oxidative stress" evidence=IMP] [GO:0042149 "cellular response
to glucose starvation" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0060257 "negative regulation of flocculation" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008183
InterPro:IPR011013 InterPro:IPR014718 Pfam:PF01263 Pfam:PF01370
InterPro:IPR016040 CGD:CAL0000448 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0034599 GO:GO:0030246 GO:GO:0042149
GO:GO:0009272 GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0001403
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AACQ01000118 EMBL:AACQ01000119
Gene3D:2.70.98.10 GO:GO:0019388 GO:GO:0060257 GO:GO:1900429
eggNOG:COG2017 KO:K15917 RefSeq:XP_713732.1 RefSeq:XP_713766.1
ProteinModelPortal:Q59VY6 SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583
GeneID:3644609 KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672
Uniprot:Q59VY6
Length = 675
Score = 116 (45.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 56/214 (26%), Positives = 98/214 (45%)
Query: 131 PIPENALLTGPLEPTNEW----YAIAKIAG--IKMCQAYQI---QYKFNAISGMPTNLYG 181
PIPE+ P++PTN + + I I A+++ +Y FN I P+ L G
Sbjct: 144 PIPEHC----PMDPTNPYGRTKFIIESILKDIYNSDDAWKVAILRY-FNPIGAHPSGLLG 198
Query: 182 PNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGT------GSPLREFLHVDDLAD--- 232
+ P N +LP L + + +++ ++G G+P+R+++HV DLA
Sbjct: 199 EDPLGIPNN--LLPYLA----QVAIGRREKLSIFGNDYNSRDGTPIRDYIHVVDLAKGHI 252
Query: 233 -AVVFMMD-EYDGL-EHLNVGSGKEVSIKELAEWVKEAVGFE--GELVWDSSKPDGTPRK 287
A+ ++ + + GL N+G+GK ++ E+ + VG E E+V + G
Sbjct: 253 AALAYLKNLQSKGLYREWNLGTGKGSTVFEVYHAFSKVVGRELPHEVV---GRRAGDVLD 309
Query: 288 LMDSSKLAR--LGWRAKIELRDGLADTYKWYLEN 319
L A L W+ ++ + D D +KW EN
Sbjct: 310 LTAKPDRANKELQWKTELTIDDACKDLWKWTTEN 343
Score = 45 (20.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 13/53 (24%), Positives = 23/53 (43%)
Query: 19 IFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSY 71
I V G G +GS V +L+S G+ +++ + + +E P Y
Sbjct: 6 ILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAVARIEFIVKQHVPFY 58
>UNIPROTKB|P95780 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:210007
"Streptococcus mutans UA159" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103 EMBL:AE014133
GenomeReviews:AE014133_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305 KO:K01710
PANTHER:PTHR10366:SF41 EMBL:D78182 RefSeq:NP_721810.1 PDB:1KEP
PDB:1KET PDBsum:1KEP PDBsum:1KET ProteinModelPortal:P95780
SMR:P95780 EnsemblBacteria:EBSTRT00000013418 GeneID:1028708
KEGG:smu:SMU_1457 PATRIC:19664935 OMA:HEDWWKA
ProtClustDB:CLSK877134 EvolutionaryTrace:P95780 Uniprot:P95780
Length = 348
Score = 114 (45.2 bits), Expect = 0.00059, P = 0.00059
Identities = 37/150 (24%), Positives = 75/150 (50%)
Query: 174 GMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADA 233
G+ + ++N+ P H+ + R+ ++G K + +G G +R+++H +D +
Sbjct: 180 GVKATISNCSNNYGPYQ-HIEKFIPRQITNI-LSGIKPKL-YGEGKNVRDWIHTNDHSTG 236
Query: 234 VVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWD--SSKPDGTPRKLMDS 291
V ++ + E +G+ E + KE+ E + E + + + +D + + R +DS
Sbjct: 237 VWAILTKGRIGETYLIGADGEKNNKEVLELILEKMS-QPKNAYDHVTDRAGHDLRYAIDS 295
Query: 292 SKLAR-LGWRAKI-ELRDGLADTYKWYLEN 319
+KL LGW+ + +GL DT KWY E+
Sbjct: 296 TKLREELGWKPQFTNFEEGLEDTIKWYTEH 325
>UNIPROTKB|A0QSK6 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:246196
"Mycobacterium smegmatis str. MC2 155" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IGI] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IGI]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:YP_006566244.1 RefSeq:YP_885894.1 ProteinModelPortal:A0QSK6
SMR:A0QSK6 STRING:A0QSK6 EnsemblBacteria:EBMYCT00000041385
GeneID:13429291 GeneID:4531259 KEGG:msg:MSMEI_1476
KEGG:msm:MSMEG_1512 PATRIC:18075481 OMA:AYNDARY
BioCyc:MSME246196:GJ4Y-1512-MONOMER Uniprot:A0QSK6
Length = 331
Score = 113 (44.8 bits), Expect = 0.00070, P = 0.00070
Identities = 61/246 (24%), Positives = 104/246 (42%)
Query: 83 HANNTY--PAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFA-PQPIPENALLT 139
H +N P F+ N+ ++++ R+ V+ L + + +Y P N T
Sbjct: 82 HVDNALADPEPFLHSNVVGTYTILEAVRRHNVR-LHHVSTDEVYGDLELDNPARFNE--T 138
Query: 140 GPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMR 199
P P++ Y+ K A + +A+ Y A +N YGP HV + R
Sbjct: 139 TPYNPSSP-YSSTKAAADLLVRAWVRSYGVRATISNCSNNYGPYQ-------HVEKFIPR 190
Query: 200 RFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVV-FMMDEYDGLEHLNVGSGKEVSIK 258
+ V + ++G G+ +R+++HVDD AV + D G +L +G+ E +
Sbjct: 191 QI--TNVLTGRRPKLYGAGANVRDWIHVDDHNSAVWRILTDGTIGRTYL-IGAECERNNL 247
Query: 259 ELAEWVKEAVGFEGE---LVWDSSKPDGTPRKLMDSSKLA-RLGWRAK-IELRDGLADTY 313
+ + + +G + + V D + D R +D S L LGW K + GL DT
Sbjct: 248 TVMRTILKLMGRDPDDFDHVTDRAGHD--LRYAIDPSTLQDELGWAPKHTDFEAGLTDTI 305
Query: 314 KWYLEN 319
WY N
Sbjct: 306 DWYRAN 311
>UNIPROTKB|Q47Y09 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 112 (44.5 bits), Expect = 0.00098, P = 0.00098
Identities = 56/276 (20%), Positives = 111/276 (40%)
Query: 53 DLTRQSDVESFFAAEKPS--YVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRY 110
D+ + D ++ + K Y++ AA +G + + P + N+ ++ +A
Sbjct: 77 DIRQLEDCQTALSHYKSGVDYILHQAA-LGSVPRSIADPLLTNSANITGFLTMLTAAKET 135
Query: 111 GVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFN 170
VK ++ SS Y P E+A+ PL P YA+ K + Y N
Sbjct: 136 QVKSFVYAASSSTYGDHPALPKVEDAI-GKPLSP----YAVTKYVNELYADVFHKTYGLN 190
Query: 171 AISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDL 230
N++G + P+ ++ A++ ++ A + +E+++ G G R+F V++
Sbjct: 191 CTGLRYFNVFGKRQD--PDGAYA--AVIPKWTVAMIAN-EELLINGDGETSRDFCFVENA 245
Query: 231 ADAVVFMMDEYD-GLEHL-NVGSGKEVSIKELAEWVKEA-----VGFEGELVWDSSKPDG 283
A + D G + NV G S+ L +K A V ++ + +
Sbjct: 246 VQANILAATANDAGKNQVYNVALGDRTSLNTLFNSLKVALQANGVDYQKSPTYQDFRAGD 305
Query: 284 TPRKLMDSSKLARL-GWRAKIELRDGLADTYKWYLE 318
D SK L G+ + +++ G+ WY++
Sbjct: 306 VRHSQADISKAKSLIGFEPEFKIQQGIDKAMPWYIK 341
>TIGR_CMR|CPS_3643 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 112 (44.5 bits), Expect = 0.00098, P = 0.00098
Identities = 56/276 (20%), Positives = 111/276 (40%)
Query: 53 DLTRQSDVESFFAAEKPS--YVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRY 110
D+ + D ++ + K Y++ AA +G + + P + N+ ++ +A
Sbjct: 77 DIRQLEDCQTALSHYKSGVDYILHQAA-LGSVPRSIADPLLTNSANITGFLTMLTAAKET 135
Query: 111 GVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFN 170
VK ++ SS Y P E+A+ PL P YA+ K + Y N
Sbjct: 136 QVKSFVYAASSSTYGDHPALPKVEDAI-GKPLSP----YAVTKYVNELYADVFHKTYGLN 190
Query: 171 AISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDL 230
N++G + P+ ++ A++ ++ A + +E+++ G G R+F V++
Sbjct: 191 CTGLRYFNVFGKRQD--PDGAYA--AVIPKWTVAMIAN-EELLINGDGETSRDFCFVENA 245
Query: 231 ADAVVFMMDEYD-GLEHL-NVGSGKEVSIKELAEWVKEA-----VGFEGELVWDSSKPDG 283
A + D G + NV G S+ L +K A V ++ + +
Sbjct: 246 VQANILAATANDAGKNQVYNVALGDRTSLNTLFNSLKVALQANGVDYQKSPTYQDFRAGD 305
Query: 284 TPRKLMDSSKLARL-GWRAKIELRDGLADTYKWYLE 318
D SK L G+ + +++ G+ WY++
Sbjct: 306 VRHSQADISKAKSLIGFEPEFKIQQGIDKAMPWYIK 341
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 322 322 0.00085 116 3 11 22 0.40 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 141
No. of states in DFA: 609 (65 KB)
Total size of DFA: 233 KB (2127 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.76u 0.09s 24.85t Elapsed: 00:00:05
Total cpu time: 24.80u 0.09s 24.89t Elapsed: 00:00:05
Start: Fri May 10 05:58:00 2013 End: Fri May 10 05:58:05 2013
WARNINGS ISSUED: 1