Citrus Sinensis ID: 020730

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320--
MGDSNKDSCSFLSEKSAKIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWRAKIELRDGLADTYKWYLENVKQ
cccccccccccccccccEEEEEccccccHHHHHHHHHHccccEEEEccccccccccHHHHHHHHHHccccEEEEEHHHcccccHHccccHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccccccccccccccccHHHHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHHHHHcccccccEEEcccccccHHHHHHHHHHHHccccEEEEcccccccccccccccHHHHcccccccccHHHHHHHHHHHHHHHHcc
***************SAKIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWRAKIELRDGLADTYKWYLENV**
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MGDSNKDSCSFLSEKSAKIFVAGHRGLVGSAIVRKLLSLGFTNLLLRTHAELDLTRQSDVESFFAAEKPSYVIVAAAKVGGIHANNTYPAEFIAINLQIQTNVIDSAFRYGVKKLLFLGSSCIYPKFAPQPIPENALLTGPLEPTNEWYAIAKIAGIKMCQAYQIQYKFNAISGMPTNLYGPNDNFHPENSHVLPALMRRFHEAKVNGAKEVVVWGTGSPLREFLHVDDLADAVVFMMDEYDGLEHLNVGSGKEVSIKELAEWVKEAVGFEGELVWDSSKPDGTPRKLMDSSKLARLGWRAKIELRDGLADTYKWYLENVKQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable GDP-L-fucose synthase 1 Two step NADP-dependent conversion of GDP-4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.confidentQ67WR2
Putative GDP-L-fucose synthase 2 Two step NADP-dependent conversion of GDP-4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.confidentQ9LMU0
Uncharacterized protein y4aF Putative nucleotide sugar epimerase/dehydrogenase.probableP55353

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.1.-.-Acting on the CH-OH group of donors.probable
1.1.1.-15-hydroxyprostaglandin dehydrogenase (NAD(+)).probable
1.1.1.271GDP-L-fucose synthase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1E6U, chain A
Confidence level:very confident
Coverage over the Query: 16-320
View the alignment between query and template
View the model in PyMOL