Your job contains 1 sequence.
>020733
MEEEMLSIISNGETNVIPELSDSISSTPLIPATKRLRHASAVSKFKGVVPQQNGHWGAQI
YANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPWTKITIEEPNFQSHYSTEAVI
NMIRDGSYSSRQLFQKELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQ
LVFHDKSMKLWKFRYCYWKSSQSFVFTRGWNRFVKENQLKANDTICFYLCELRDIAKGTK
TFGMIDAKKGENSGASAEVSGPYVDMKVDLQLQLGQNKKENKVEEDDNGNEIEATEEVEL
KAPSSTSDSERKLFKLFGVEIF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020733
(322 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2026058 - symbol:AT1G51120 species:3702 "Arabi... 411 8.5e-75 2
TAIR|locus:2015832 - symbol:AT1G50680 species:3702 "Arabi... 413 3.7e-74 2
TAIR|locus:2031185 - symbol:TEM1 "TEMPRANILLO 1" species:... 270 4.7e-44 2
TAIR|locus:2164215 - symbol:DPA4 "DEVELOPMENT-RELATED PcG... 284 5.9e-25 1
TAIR|locus:2012438 - symbol:RAV2 "related to ABI3/VP1 2" ... 251 7.9e-24 2
TAIR|locus:2080782 - symbol:AT3G11580 species:3702 "Arabi... 269 2.3e-23 1
TAIR|locus:2117007 - symbol:NGA4 "NGATHA4" species:3702 "... 267 3.8e-23 1
TAIR|locus:2205319 - symbol:RAV1 "related to ABI3/VP1 1" ... 265 6.1e-23 1
TAIR|locus:2079537 - symbol:NGA2 "NGATHA2" species:3702 "... 262 1.3e-22 1
TAIR|locus:2039165 - symbol:ABS2 "ABNORMAL SHOOT 2" speci... 261 1.6e-22 1
TAIR|locus:2041404 - symbol:NGA1 "NGATHA1" species:3702 "... 254 9.0e-22 1
TAIR|locus:2200950 - symbol:NGA3 "NGATHA3" species:3702 "... 253 1.1e-21 1
TAIR|locus:2085969 - symbol:EDF3 "ethylene response DNA b... 250 2.4e-21 1
TAIR|locus:1005716457 - symbol:RAP2.9 "related to AP2 9" ... 117 9.2e-09 2
TAIR|locus:505006142 - symbol:CRF7 "AT1G22985" species:37... 134 2.0e-08 1
TAIR|locus:2061956 - symbol:ERF71 "ethylene response fact... 134 2.0e-08 1
TAIR|locus:2154272 - symbol:CRF3 "AT5G53290" species:3702... 152 2.9e-08 1
TAIR|locus:2136078 - symbol:CRF1 "AT4G11140" species:3702... 149 3.7e-08 1
TAIR|locus:2018635 - symbol:RAP2.6 "related to AP2 6" spe... 136 8.2e-08 1
UNIPROTKB|Q7XKC5 - symbol:LOC_Os04g58000 "B3 domain-conta... 148 1.3e-07 1
UNIPROTKB|Q8VXC3 - symbol:ebp-89 "Ethylene responsive pro... 145 1.5e-07 1
TAIR|locus:2128429 - symbol:CRF2 "AT4G23750" species:3702... 144 2.3e-07 1
TAIR|locus:2060385 - symbol:AT2G22200 species:3702 "Arabi... 141 2.3e-07 1
TAIR|locus:2204730 - symbol:AT1G77640 species:3702 "Arabi... 140 2.3e-07 1
TAIR|locus:2135282 - symbol:AT4G39780 species:3702 "Arabi... 141 2.6e-07 1
TAIR|locus:2119555 - symbol:AT4G13620 species:3702 "Arabi... 143 3.9e-07 1
TAIR|locus:2201103 - symbol:DREB26 "dehydration response ... 137 4.0e-07 1
TAIR|locus:2051359 - symbol:ERF53 "ERF domain 53" species... 141 4.7e-07 1
TAIR|locus:2086203 - symbol:ESE1 "ethylene and salt induc... 119 8.7e-07 1
TAIR|locus:2176511 - symbol:AT5G43410 species:3702 "Arabi... 119 8.7e-07 1
TAIR|locus:2027171 - symbol:ORA47 species:3702 "Arabidops... 130 9.7e-07 1
TAIR|locus:2018289 - symbol:ERF14 "Ethylene-responsive el... 118 1.1e-06 1
TAIR|locus:2055002 - symbol:ERF13 "ethylene-responsive el... 133 1.1e-06 1
TAIR|locus:2171840 - symbol:AT5G65130 species:3702 "Arabi... 135 1.4e-06 1
TAIR|locus:2057517 - symbol:ARF10 "auxin response factor ... 141 1.6e-06 1
UNIPROTKB|A4LBC0 - symbol:LFL1 "B3 domain-containing prot... 137 2.0e-06 1
UNIPROTKB|Q6Z1Z3 - symbol:IDEF1 "B3 domain-containing pro... 136 2.1e-06 1
TAIR|locus:2005704 - symbol:AT1G75490 species:3702 "Arabi... 129 2.2e-06 1
TAIR|locus:2123708 - symbol:AT4G28140 species:3702 "Arabi... 133 2.8e-06 1
TAIR|locus:2026301 - symbol:CRF8 "AT1G71130" species:3702... 117 2.9e-06 1
TAIR|locus:2132962 - symbol:CRF4 "AT4G27950" species:3702... 134 3.0e-06 1
TAIR|locus:2124504 - symbol:AT4G18450 species:3702 "Arabi... 133 3.1e-06 1
TAIR|locus:2170101 - symbol:ERF110 "ethylene response fa... 128 4.1e-06 1
TAIR|locus:2015061 - symbol:AT1G22190 species:3702 "Arabi... 130 4.5e-06 1
TAIR|locus:2086213 - symbol:TDR1 "Transcriptional Regulat... 112 5.1e-06 1
TAIR|locus:2129116 - symbol:ERF-1 "ethylene responsive el... 129 6.5e-06 1
TAIR|locus:2173063 - symbol:AT5G52020 species:3702 "Arabi... 127 6.8e-06 1
TAIR|locus:2148022 - symbol:SHN2 "shine2" species:3702 "A... 123 7.0e-06 1
TAIR|locus:2076621 - symbol:AT3G57600 species:3702 "Arabi... 129 7.1e-06 1
TAIR|locus:2064417 - symbol:HSI2 "high-level expression o... 136 7.1e-06 1
TAIR|locus:2129111 - symbol:AT4G16750 species:3702 "Arabi... 121 7.3e-06 1
TAIR|locus:2032170 - symbol:LEC2 "LEAFY COTYLEDON 2" spec... 131 7.7e-06 1
TAIR|locus:2171514 - symbol:ERF2 "ethylene responsive ele... 127 8.0e-06 1
TAIR|locus:2034295 - symbol:AT1G36060 species:3702 "Arabi... 129 9.7e-06 1
TAIR|locus:2037698 - symbol:SHN1 "SHINE 1" species:3702 "... 123 1.0e-05 1
TAIR|locus:2145477 - symbol:SHN3 "shine3" species:3702 "A... 121 1.3e-05 1
TAIR|locus:2197076 - symbol:RAP2.12 "related to AP2 12" s... 129 1.3e-05 1
TAIR|locus:2008021 - symbol:ERF3 "ethylene responsive ele... 124 1.4e-05 1
TAIR|locus:2009655 - symbol:ERF8 "ethylene response facto... 120 1.5e-05 1
TAIR|locus:2183174 - symbol:RAP2.11 "related to AP2 11" s... 125 1.6e-05 1
TAIR|locus:2093166 - symbol:ABI3 "AT3G24650" species:3702... 132 1.8e-05 1
TAIR|locus:2183861 - symbol:Rap2.6L "related to AP2 6l" s... 122 1.9e-05 1
TAIR|locus:2151576 - symbol:AT5G61590 species:3702 "Arabi... 121 1.9e-05 1
TAIR|locus:2087065 - symbol:ERF4 "ethylene responsive ele... 122 2.3e-05 1
TAIR|locus:2029491 - symbol:RAP2.4 "related to AP2 4" spe... 126 2.4e-05 1
TAIR|locus:2058764 - symbol:ERF38 "ERF family protein 38"... 119 2.8e-05 1
TAIR|locus:2825329 - symbol:AT1G71450 species:3702 "Arabi... 117 3.5e-05 1
TAIR|locus:2086223 - symbol:ERF1 "ethylene response facto... 120 3.7e-05 1
TAIR|locus:2031890 - symbol:ESR1 "ENHANCER OF SHOOT REGEN... 124 3.9e-05 1
TAIR|locus:2194007 - symbol:ERF73 "ethylene response fact... 122 3.9e-05 1
TAIR|locus:2195985 - symbol:AT1G77200 species:3702 "Arabi... 121 4.1e-05 1
TAIR|locus:2024249 - symbol:ERF10 "ERF domain protein 10"... 121 4.2e-05 1
TAIR|locus:2116592 - symbol:HSL1 "HSI2-like 1" species:37... 128 5.4e-05 1
TAIR|locus:2089368 - symbol:EBP "ethylene-responsive elem... 120 5.7e-05 1
TAIR|locus:2156171 - symbol:AT5G61890 species:3702 "Arabi... 120 5.7e-05 1
TAIR|locus:2155680 - symbol:AIL7 "AINTEGUMENTA-like 7" sp... 125 6.3e-05 1
TAIR|locus:2131849 - symbol:DREB1A "dehydration response ... 118 6.3e-05 1
TAIR|locus:2044845 - symbol:HRD "HARDY" species:3702 "Ara... 115 6.7e-05 1
TAIR|locus:2032500 - symbol:ERF11 "ERF domain protein 11"... 112 7.1e-05 1
TAIR|locus:2825842 - symbol:RAP2.1 "related to AP2 1" spe... 108 8.3e-05 1
TAIR|locus:2074765 - symbol:CEJ1 "cooperatively regulated... 108 8.3e-05 1
TAIR|locus:2144296 - symbol:TINY2 "AT5G11590" species:370... 118 8.5e-05 1
TAIR|locus:2183304 - symbol:AT5G07310 species:3702 "Arabi... 119 8.8e-05 1
TAIR|locus:2062954 - symbol:CRF5 "AT2G46310" species:3702... 120 8.9e-05 1
TAIR|locus:2176095 - symbol:ABR1 "ABA REPRESSOR1" species... 122 9.2e-05 1
TAIR|locus:2202200 - symbol:AT1G19210 species:3702 "Arabi... 114 9.2e-05 1
TAIR|locus:2032510 - symbol:ERF12 "ERF domain protein 12"... 114 0.00010 1
TAIR|locus:2014185 - symbol:AT1G64380 species:3702 "Arabi... 120 0.00012 1
TAIR|locus:2126460 - symbol:ARF16 "auxin response factor ... 129 0.00012 2
UNIPROTKB|Q5MFV1 - symbol:BIERF3 "BTH-induced ERF transcr... 119 0.00012 1
TAIR|locus:2092339 - symbol:ERF7 "ethylene response facto... 117 0.00012 1
TAIR|locus:2167659 - symbol:ERF9 "erf domain protein 9" s... 114 0.00014 1
TAIR|locus:2035454 - symbol:MP "MONOPTEROS" species:3702 ... 125 0.00014 1
TAIR|locus:2146985 - symbol:ESE3 "ethylene and salt induc... 112 0.00015 1
UNIPROTKB|Q5MFV3 - symbol:BIERF1 "BTH-induced ERF transcr... 120 0.00016 1
TAIR|locus:2155598 - symbol:TOE3 "target of early activat... 119 0.00017 1
UNIPROTKB|P37398 - symbol:VP1 "B3 domain-containing prote... 123 0.00018 1
TAIR|locus:2009298 - symbol:ARF21 "auxin response factor ... 122 0.00018 1
TAIR|locus:2200477 - symbol:ADAP "ARIA-interacting double... 118 0.00021 1
TAIR|locus:2012653 - symbol:AT1G33760 species:3702 "Arabi... 111 0.00022 1
WARNING: Descriptions of 28 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2026058 [details] [associations]
symbol:AT1G51120 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC079828
HSSP:Q9ZWM9 KO:K09287 HOGENOM:HOG000090522 ProtClustDB:CLSN2682911
EMBL:AY560883 IPI:IPI00548594 PIR:F96548 RefSeq:NP_175524.1
UniGene:At.50656 ProteinModelPortal:Q9C688 SMR:Q9C688 PRIDE:Q9C688
DNASU:841535 EnsemblPlants:AT1G51120.1 GeneID:841535
KEGG:ath:AT1G51120 TAIR:At1g51120 eggNOG:NOG252474
InParanoid:Q9C688 OMA:EEMKTET PhylomeDB:Q9C688
Genevestigator:Q9C688 Uniprot:Q9C688
Length = 352
Score = 411 (149.7 bits), Expect = 8.5e-75, Sum P(2) = 8.5e-75
Identities = 96/198 (48%), Positives = 125/198 (63%)
Query: 128 YSSRQLFQKELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQLVFHDKS 187
+S QLFQKELTPSDVGKLNRLVIPKKYAVKY P IS+ E ++ +DV++VF+D++
Sbjct: 172 FSCTQLFQKELTPSDVGKLNRLVIPKKYAVKYMPFISDDQSEKETSEGVEDVEVVFYDRA 231
Query: 188 MKLWKFRYCYWKSSQSFVFTRGWNRFVKENQLKANDTICFYLCELRDIAK---G-TKTFG 243
M+ WKFRYCYW+SSQSFVFTRGWN FVKE LK D I FY C++ + K G +KTF
Sbjct: 232 MRQWKFRYCYWRSSQSFVFTRGWNGFVKEKNLKEKDIIVFYTCDVPNNVKTLEGQSKTFL 291
Query: 244 MIDAKKGENSGASAEVSGPYVDMKVDLQLQLGQNKKENKVEEDDNGNEIEATEEVELKAP 303
MID SG +G V +V NK +++ +++ E T +VE
Sbjct: 292 MIDVH--HFSG-----NGFVVPEEV--------NKTVHEISDEEMKTETLFTSKVE---E 333
Query: 304 SSTSDSERKLFKLFGVEI 321
+ S+ ++ F LFGV I
Sbjct: 334 ETKSEEKKGGFMLFGVRI 351
Score = 362 (132.5 bits), Expect = 8.5e-75, Sum P(2) = 8.5e-75
Identities = 71/124 (57%), Positives = 90/124 (72%)
Query: 10 SNGETNVIPELSDSISSTPLIPATKRLRHASAVSKFKGVVPQQNGHWGAQIYANHQRIWL 69
++G T+ + L+ + T + TK S +KFKGVV QQNGHWGAQIYA+H+RIWL
Sbjct: 14 TSGLTDSVLSLTKRMKPTEVTTTTKPA--LSNTTKFKGVVQQQNGHWGAQIYADHRRIWL 71
Query: 70 GTFKSEKDAAMAYDSAAIRLRGVD--SHRNFPWTKITIEEPNFQSHYSTEAVINMIRDGS 127
GTFKS +AA AYDSA+I+LR D SHRNFPW+ T+ EP+FQ Y+TEAV+NMIRDGS
Sbjct: 72 GTFKSAHEAAAAYDSASIKLRSFDANSHRNFPWSDFTLHEPDFQECYTTEAVLNMIRDGS 131
Query: 128 YSSR 131
Y +
Sbjct: 132 YQHK 135
>TAIR|locus:2015832 [details] [associations]
symbol:AT1G50680 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PRINTS:PR00367
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AC079279 HSSP:Q9ZWM9 KO:K09287 EMBL:AY560882
IPI:IPI00527323 PIR:E96543 RefSeq:NP_175483.1 UniGene:At.50579
ProteinModelPortal:Q9C6P5 SMR:Q9C6P5 PaxDb:Q9C6P5 PRIDE:Q9C6P5
EnsemblPlants:AT1G50680.1 GeneID:841490 KEGG:ath:AT1G50680
TAIR:At1g50680 eggNOG:NOG331833 HOGENOM:HOG000090522
InParanoid:Q9C6P5 OMA:GEVNQES PhylomeDB:Q9C6P5
ProtClustDB:CLSN2682911 Genevestigator:Q9C6P5 Uniprot:Q9C6P5
Length = 337
Score = 413 (150.4 bits), Expect = 3.7e-74, Sum P(2) = 3.7e-74
Identities = 91/181 (50%), Positives = 116/181 (64%)
Query: 120 INMIRDGSYSSRQLFQKELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHAEND---KA 176
+N D +S QLFQKELTPSDVGKLNRLVIPKKYAVKY P IS E E +
Sbjct: 143 VNQESDKCFSCTQLFQKELTPSDVGKLNRLVIPKKYAVKYMPFISADQSEKEEGEIVGSV 202
Query: 177 DDVQLVFHDKSMKLWKFRYCYWKSSQSFVFTRGWNRFVKENQLKANDTICFYLCELRDIA 236
+DV++VF+D++M+ WKFRYCYWKSSQSFVFTRGWN FVKE LK D I FY C++ +
Sbjct: 203 EDVEVVFYDRAMRQWKFRYCYWKSSQSFVFTRGWNSFVKEKNLKEKDVIAFYTCDVPNNV 262
Query: 237 K---GT-KTFGMIDAKKGENSGA--SAEVSGPYVDMKVDLQLQLGQNKKENKVEEDDNGN 290
K G K F MID ++G+ + EVS D V Q++ +N + +E+ + +
Sbjct: 263 KTLEGQRKNFLMIDVHCFSDNGSVVAEEVSMTVHDSSV--QVKKTENLVSSMLEDKETKS 320
Query: 291 E 291
E
Sbjct: 321 E 321
Score = 354 (129.7 bits), Expect = 3.7e-74, Sum P(2) = 3.7e-74
Identities = 67/114 (58%), Positives = 86/114 (75%)
Query: 20 LSDSISSTPLIPATKRLRHASAVSKFKGVVPQQNGHWGAQIYANHQRIWLGTFKSEKDAA 79
L D + ++ ++ + AS K+KGVV QQNGHWGAQIYA+H+RIWLGTFKS +AA
Sbjct: 3 LDDEPENALVVSSSPKTVVASGNVKYKGVVQQQNGHWGAQIYADHKRIWLGTFKSADEAA 62
Query: 80 MAYDSAAIRLRGVD--SHRNFPWTKITIEEPNFQSHYSTEAVINMIRDGSYSSR 131
AYDSA+I+LR D SHRNFPW+ IT+ EP+FQ+ Y+TE V+NMIRDGSY +
Sbjct: 63 TAYDSASIKLRSFDANSHRNFPWSTITLNEPDFQNCYTTETVLNMIRDGSYQHK 116
>TAIR|locus:2031185 [details] [associations]
symbol:TEM1 "TEMPRANILLO 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=NAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0048573 HSSP:Q9ZWM9
HOGENOM:HOG000237484 KO:K09287 ProtClustDB:CLSN2682511
EMBL:AY091069 EMBL:AY122941 IPI:IPI00518546 PIR:A86386
RefSeq:NP_173927.1 UniGene:At.17318 ProteinModelPortal:Q9C6M5
SMR:Q9C6M5 DIP:DIP-59693N PaxDb:Q9C6M5 PRIDE:Q9C6M5
EnsemblPlants:AT1G25560.1 GeneID:839143 KEGG:ath:AT1G25560
TAIR:At1g25560 eggNOG:NOG250438 InParanoid:Q9C6M5 OMA:NDVAVEC
PhylomeDB:Q9C6M5 Genevestigator:Q9C6M5 Uniprot:Q9C6M5
Length = 361
Score = 270 (100.1 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 51/104 (49%), Positives = 69/104 (66%)
Query: 125 DGSYSSRQ-LFQKELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQLVF 183
D +R+ LF+K +TPSDVGKLNRLVIPK++A K+FP + V +
Sbjct: 185 DAVLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINL 244
Query: 184 HDKSMKLWKFRYCYWKSSQSFVFTRGWNRFVKENQLKANDTICF 227
D++ K+W+FRY YW SSQS+V T+GW+RFVKE L+A D +CF
Sbjct: 245 EDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCF 288
Score = 211 (79.3 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 42/89 (47%), Positives = 58/89 (65%)
Query: 43 SKFKGVVPQQNGHWGAQIYANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPWTK 102
SK+KGVVPQ NG WGAQIY HQR+WLGTF E++AA +YD A R RG D+ NF ++
Sbjct: 70 SKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRDAVTNFK-SQ 128
Query: 103 I--TIEEPNFQSHYSTEAVINMIRDGSYS 129
+ E F +S +++M+R +Y+
Sbjct: 129 VDGNDAESAFLDAHSKAEIVDMLRKHTYA 157
>TAIR|locus:2164215 [details] [associations]
symbol:DPA4 "DEVELOPMENT-RELATED PcG TARGET IN THE APEX
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=IMP] [GO:0010358 "leaf shaping" evidence=IGI] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048366 "leaf development" evidence=IGI] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010073 EMBL:AB006700 GO:GO:0010358
HSSP:Q9ZWM9 HOGENOM:HOG000239355 IPI:IPI00517655 IPI:IPI00891280
RefSeq:NP_001119177.1 RefSeq:NP_196243.2 UniGene:At.54745
ProteinModelPortal:Q9FNI3 SMR:Q9FNI3 EnsemblPlants:AT5G06250.2
GeneID:830512 KEGG:ath:AT5G06250 TAIR:At5g06250 eggNOG:NOG256843
InParanoid:Q9FNI3 OMA:LECQMDE PhylomeDB:Q9FNI3
ProtClustDB:CLSN2702250 Genevestigator:Q9FNI3 Uniprot:Q9FNI3
Length = 282
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 75/233 (32%), Positives = 109/233 (46%)
Query: 93 DSHRNFPWTKITIEEPNFQSHYSTEAVINMIRDGSYSSRQLFQKELTPSDVGKLNRLVIP 152
D H W + S +T A + D S LF+K LTPSDVGKLNRLVIP
Sbjct: 9 DHHHTLLWQQQQHRHTTDTSETTTTAT--WLHDDLKES--LFEKSLTPSDVGKLNRLVIP 64
Query: 153 KKYAVKYFPQISERVEEHAENDKADD--VQLVFHDKSMKLWKFRYCYWKSSQSFVFTRGW 210
K++A KYFP + V A + + + + L F D+S K W+FRY YW SSQS+V T+GW
Sbjct: 65 KQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKSWRFRYSYWNSSQSYVLTKGW 124
Query: 211 NRFVKENQLKANDTICF--YLCELRDIAKGTKTFGMIDAKKGENSGASAEVSGPYVDMKV 268
+RFVK+ QL D + F + + R + G + G + + ++ S
Sbjct: 125 SRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRRRGQGSSSSVAATNSAVNTSSMGALSYH 184
Query: 269 DLQLQLGQNKKENKVEEDDNGNEIEATEEVELKAPSSTSDSERKLFKLFGVEI 321
+ + + E G + E PSS+ + +LFGV +
Sbjct: 185 QIHATSNYSNPPSHSEYSHYGAAVATAAETH-STPSSSVVGSSRTVRLFGVNL 236
>TAIR|locus:2012438 [details] [associations]
symbol:RAV2 "related to ABI3/VP1 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC011914 EMBL:AC011665
HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484 KO:K09287
ProtClustDB:CLSN2682511 EMBL:AB013887 EMBL:AF360312 EMBL:AY056361
EMBL:AY085908 EMBL:AF003101 IPI:IPI00548727 PIR:T51330
RefSeq:NP_001185352.1 RefSeq:NP_564947.1 UniGene:At.25344
ProteinModelPortal:P82280 SMR:P82280 DIP:DIP-59694N STRING:P82280
PaxDb:P82280 PRIDE:P82280 EnsemblPlants:AT1G68840.1
EnsemblPlants:AT1G68840.2 GeneID:843216 KEGG:ath:AT1G68840
TAIR:At1g68840 InParanoid:P82280 OMA:MDSSCID PhylomeDB:P82280
Genevestigator:P82280 Uniprot:P82280
Length = 352
Score = 251 (93.4 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 66/167 (39%), Positives = 95/167 (56%)
Query: 72 FKSE-KDAAMAYDSAAIRLRGVDSHRNFPWTKITIEEPNFQSHY-STEAVINMIRDGSYS 129
FK+ +D +A+ A + VD R + +E+ N + + S +A N R+GS +
Sbjct: 118 FKNVLEDGDLAFLEAHSKAEIVDMLRKHTYAD-ELEQNNKRQLFLSVDA--NGKRNGSST 174
Query: 130 SRQ---------LFQKELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQ 180
++ LF+K +TPSDVGKLNRLVIPK++A K+FP S V
Sbjct: 175 TQNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAV------TKGVL 228
Query: 181 LVFHDKSMKLWKFRYCYWKSSQSFVFTRGWNRFVKENQLKANDTICF 227
+ F D + K+W+FRY YW SSQS+V T+GW+RFVKE L+A D + F
Sbjct: 229 INFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTF 275
Score = 216 (81.1 bits), Expect = 8.2e-17, Sum P(2) = 8.2e-17
Identities = 43/89 (48%), Positives = 60/89 (67%)
Query: 43 SKFKGVVPQQNGHWGAQIYANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPWTK 102
SK+KGVVPQ NG WGAQIY HQR+WLGTF +++AA +YD AA R RG D+ NF K
Sbjct: 63 SKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVNF---K 119
Query: 103 ITIEEPN--FQSHYSTEAVINMIRDGSYS 129
+E+ + F +S +++M+R +Y+
Sbjct: 120 NVLEDGDLAFLEAHSKAEIVDMLRKHTYA 148
Score = 37 (18.1 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 11/48 (22%), Positives = 23/48 (47%)
Query: 276 QNKKENKVEEDDNGNEIEATEEVELKAPSSTSDSE-RKLFKLFGVEIF 322
+N + V + +E ++ K S ++ + + +LFGV+IF
Sbjct: 265 KNLRAGDVVTFERSTGLERQLYIDWKVRSGPRENPVQVVVRLFGVDIF 312
>TAIR|locus:2080782 [details] [associations]
symbol:AT3G11580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009062
"fatty acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC008153 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:AJ441076 EMBL:AK175281 EMBL:BT029371 IPI:IPI00539345
IPI:IPI00547561 RefSeq:NP_187765.2 RefSeq:NP_850559.1
UniGene:At.39724 ProteinModelPortal:Q8RYD3 SMR:Q8RYD3
EnsemblPlants:AT3G11580.1 GeneID:820331 KEGG:ath:AT3G11580
TAIR:At3g11580 eggNOG:NOG285931 InParanoid:Q8RYD3 OMA:CHGDAVE
PhylomeDB:Q8RYD3 ProtClustDB:CLSN2918062 Genevestigator:Q8RYD3
Uniprot:Q8RYD3
Length = 267
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 55/107 (51%), Positives = 72/107 (67%)
Query: 125 DGSYSSRQ-LFQKELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQ--- 180
D + + R+ LF+K LTPSDVGKLNRLVIPK++A KYFP + + +D A +
Sbjct: 19 DVAIAQRESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGML 78
Query: 181 LVFHDKSMKLWKFRYCYWKSSQSFVFTRGWNRFVKENQLKANDTICF 227
L F D+S K WKFRY YW SSQS+V T+GW+R+VK+ L A D + F
Sbjct: 79 LSFEDESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFF 125
>TAIR|locus:2117007 [details] [associations]
symbol:NGA4 "NGATHA4" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AF096370 EMBL:AL161492 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:FJ873734 EMBL:BT029520 EMBL:AB493670 IPI:IPI00543194
PIR:T01944 RefSeq:NP_192059.4 UniGene:At.34418
ProteinModelPortal:O82595 SMR:O82595 STRING:O82595 PRIDE:O82595
EnsemblPlants:AT4G01500.1 GeneID:826750 KEGG:ath:AT4G01500
TAIR:At4g01500 eggNOG:NOG287578 InParanoid:O82595 OMA:YSSERRE
Genevestigator:O82595 Uniprot:O82595
Length = 333
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 55/104 (52%), Positives = 71/104 (68%)
Query: 128 YSSRQ---LFQKELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQLVFH 184
YSS + +F K LTPSDVGKLNRLVIPK++A +FP +E++ D F
Sbjct: 27 YSSERREHMFDKVLTPSDVGKLNRLVIPKQHAENFFP-----LEDNQNGTVLD-----FQ 76
Query: 185 DKSMKLWKFRYCYWKSSQSFVFTRGWNRFVKENQLKANDTICFY 228
DK+ K+W+FRY YW SSQS+V T+GW+RFVKE +L A DT+ FY
Sbjct: 77 DKNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLFAGDTVSFY 120
>TAIR|locus:2205319 [details] [associations]
symbol:RAV1 "related to ABI3/VP1 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=IEP] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR003340 InterPro:IPR016177
Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863 PROSITE:PS51032
SMART:SM00380 SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045892 EMBL:AC011810 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009910 GO:GO:0048366
GO:GO:0009741 EMBL:AB013886 EMBL:AY063855 EMBL:AY091291
IPI:IPI00544013 PIR:T51329 RefSeq:NP_172784.1 UniGene:At.20558
PDB:1WID PDBsum:1WID ProteinModelPortal:Q9ZWM9 SMR:Q9ZWM9
STRING:Q9ZWM9 EnsemblPlants:AT1G13260.1 GeneID:837886
KEGG:ath:AT1G13260 TAIR:At1g13260 eggNOG:NOG266118
HOGENOM:HOG000237484 InParanoid:Q9ZWM9 KO:K09287 OMA:ICETPAI
PhylomeDB:Q9ZWM9 ProtClustDB:CLSN2682511 EvolutionaryTrace:Q9ZWM9
Genevestigator:Q9ZWM9 GermOnline:AT1G13260 Uniprot:Q9ZWM9
Length = 344
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 54/102 (52%), Positives = 67/102 (65%)
Query: 126 GSYSSRQLFQKELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQLVFHD 185
G S+ LF+K +TPSDVGKLNRLVIPK +A K+FP S V V L F D
Sbjct: 180 GFRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVS-------VKGVLLNFED 232
Query: 186 KSMKLWKFRYCYWKSSQSFVFTRGWNRFVKENQLKANDTICF 227
+ K+W+FRY YW SSQS+V T+GW+RFVKE L+A D + F
Sbjct: 233 VNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSF 274
Score = 235 (87.8 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 47/109 (43%), Positives = 68/109 (62%)
Query: 43 SKFKGVVPQQNGHWGAQIYANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPWTK 102
SK+KGVVPQ NG WGAQIY HQR+WLGTF E +AA AYD A R R D+ NF K
Sbjct: 60 SKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRDAVTNFKDVK 119
Query: 103 ITIEEPNFQSHYSTEAVINMIRDGSYSSRQLFQKELTPSDVGKLNRLVI 151
+ +E +F + +S +++M+R +Y+ +L Q + + G + R ++
Sbjct: 120 MDEDEVDFLNSHSKSEIVDMLRKHTYNE-ELEQSKRRRNGNGNMTRTLL 167
>TAIR|locus:2079537 [details] [associations]
symbol:NGA2 "NGATHA2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AL138642 HSSP:Q9ZWM9 HOGENOM:HOG000239355
ProtClustDB:CLSN2682823 EMBL:AK117646 EMBL:BT025866 EMBL:AY085197
IPI:IPI00523321 PIR:T47989 RefSeq:NP_191756.1 UniGene:At.34201
ProteinModelPortal:Q9M268 SMR:Q9M268 EnsemblPlants:AT3G61970.1
GeneID:825370 KEGG:ath:AT3G61970 TAIR:At3g61970 eggNOG:NOG273145
InParanoid:Q9M268 OMA:SSSMERE PhylomeDB:Q9M268
Genevestigator:Q9M268 Uniprot:Q9M268
Length = 299
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 50/101 (49%), Positives = 66/101 (65%)
Query: 127 SYSSRQLFQKELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQLVFHDK 186
S +F K +TPSDVGKLNRLVIPK++A +YFP ++ ND + L F D+
Sbjct: 16 SMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-----LDNSTTNDSNKGLLLNFEDR 70
Query: 187 SMKLWKFRYCYWKSSQSFVFTRGWNRFVKENQLKANDTICF 227
S W+FRY YW SSQS+V T+GW+RFVK+ +L A D + F
Sbjct: 71 SGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSF 111
>TAIR|locus:2039165 [details] [associations]
symbol:ABS2 "ABNORMAL SHOOT 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0080167 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC007017 EMBL:AC007135
HSSP:Q9ZWM9 HOGENOM:HOG000239355 EMBL:AK117587 EMBL:AJ441075
IPI:IPI00522172 IPI:IPI00531123 PIR:F84776 RefSeq:NP_181152.2
RefSeq:NP_850260.1 UniGene:At.23308 ProteinModelPortal:Q8GYJ2
SMR:Q8GYJ2 PaxDb:Q8GYJ2 EnsemblPlants:AT2G36080.1 GeneID:818181
KEGG:ath:AT2G36080 TAIR:At2g36080 eggNOG:NOG253490
InParanoid:Q8GYJ2 OMA:AQAVESQ PhylomeDB:Q8GYJ2
ProtClustDB:CLSN2680069 Genevestigator:Q8GYJ2 Uniprot:Q8GYJ2
Length = 244
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 57/125 (45%), Positives = 80/125 (64%)
Query: 133 LFQKELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQLVFHDKSMKLWK 192
LF+K LTPSDVGKLNRLVIPK++A +YFP ++ + E + L F D+ K W+
Sbjct: 37 LFEKPLTPSDVGKLNRLVIPKQHAERYFP-LAAAAADAVEKG----LLLCFEDEEGKPWR 91
Query: 193 FRYCYWKSSQSFVFTRGWNRFVKENQLKANDTICFYLCELRDIAKGTKTF-GMIDAKKGE 251
FRY YW SSQS+V T+GW+R+VKE L A D + F+ R + G + F G ++G+
Sbjct: 92 FRYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFH----RHRSDGGRFFIGW--RRRGD 145
Query: 252 NSGAS 256
+S +S
Sbjct: 146 SSSSS 150
>TAIR|locus:2041404 [details] [associations]
symbol:NGA1 "NGATHA1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC004411
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 GO:GO:0048366 EMBL:AC005310 HSSP:Q9ZWM9 EMBL:AK118045
EMBL:BT008534 IPI:IPI00537675 PIR:T02200 RefSeq:NP_566089.1
UniGene:At.36441 ProteinModelPortal:O82799 SMR:O82799 IntAct:O82799
STRING:O82799 EnsemblPlants:AT2G46870.1 GeneID:819300
KEGG:ath:AT2G46870 TAIR:At2g46870 eggNOG:NOG237610
HOGENOM:HOG000239355 InParanoid:O82799 OMA:MECGESG PhylomeDB:O82799
ProtClustDB:CLSN2682823 Genevestigator:O82799 Uniprot:O82799
Length = 310
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 52/110 (47%), Positives = 73/110 (66%)
Query: 133 LFQKELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQLVFHDKSMKLWK 192
+F K +TPSDVGKLNRLVIPK++A ++FP S + N+K + L F D + K W+
Sbjct: 34 MFDKVVTPSDVGKLNRLVIPKQHAERFFPLDS------SSNEKG--LLLNFEDLTGKSWR 85
Query: 193 FRYCYWKSSQSFVFTRGWNRFVKENQLKANDTICFYLCELRDIAKGTKTF 242
FRY YW SSQS+V T+GW+RFVK+ +L A D + F C + D + ++ F
Sbjct: 86 FRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRC-VGDSGRDSRLF 134
>TAIR|locus:2200950 [details] [associations]
symbol:NGA3 "NGATHA3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
HSSP:Q9ZWM9 EMBL:AC007323 eggNOG:NOG237610 HOGENOM:HOG000239355
EMBL:BX814729 IPI:IPI00536920 PIR:B86141 RefSeq:NP_171611.1
UniGene:At.49492 ProteinModelPortal:Q9MAN1 SMR:Q9MAN1 STRING:Q9MAN1
PRIDE:Q9MAN1 EnsemblPlants:AT1G01030.1 GeneID:839321
KEGG:ath:AT1G01030 TAIR:At1g01030 InParanoid:Q9MAN1 OMA:RNIVGSE
PhylomeDB:Q9MAN1 ProtClustDB:CLSN2912766 Genevestigator:Q9MAN1
Uniprot:Q9MAN1
Length = 358
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 50/95 (52%), Positives = 67/95 (70%)
Query: 133 LFQKELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQLVFHDKSMKLWK 192
+F K +TPSDVGKLNRLVIPK++A +YFP S N++ + L F D++ K+W+
Sbjct: 55 MFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSS-------NNQ-NGTLLNFQDRNGKMWR 106
Query: 193 FRYCYWKSSQSFVFTRGWNRFVKENQLKANDTICF 227
FRY YW SSQS+V T+GW+RFVKE +L A D + F
Sbjct: 107 FRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSF 141
>TAIR|locus:2085969 [details] [associations]
symbol:EDF3 "ethylene response DNA binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 EMBL:AB028607
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484
KO:K09287 ProtClustDB:CLSN2682511 EMBL:AJ441073 EMBL:AK229415
EMBL:AY087951 IPI:IPI00523797 RefSeq:NP_189201.1 UniGene:At.37331
ProteinModelPortal:Q9LS06 SMR:Q9LS06 EnsemblPlants:AT3G25730.1
GeneID:822164 KEGG:ath:AT3G25730 TAIR:At3g25730 InParanoid:Q9LS06
OMA:NAHSKSE Genevestigator:Q9LS06 Uniprot:Q9LS06
Length = 333
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 52/106 (49%), Positives = 68/106 (64%)
Query: 122 MIRDGSYSSRQLFQKELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQL 181
++ G ++ LF+K +TPSDVGKLNRLVIPK A K+FP + N + L
Sbjct: 171 VVMTGFKTAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFP-----LPLGNNNVSVKGMLL 225
Query: 182 VFHDKSMKLWKFRYCYWKSSQSFVFTRGWNRFVKENQLKANDTICF 227
F D + K+W+FRY YW SSQS+V T+GW+RFVKE +L A D I F
Sbjct: 226 NFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISF 271
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 50/103 (48%), Positives = 64/103 (62%)
Query: 43 SKFKGVVPQQNGHWGAQIYANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPWTK 102
S+FKGVVPQ NG WGAQIY HQR+WLGTF E +AA AYD AA R RG D+ NF T
Sbjct: 60 SRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKDTT 119
Query: 103 ITIEEPNFQSHYSTEAVINMIRDGSYSSRQLFQKELTPSDVGK 145
EE F + +S +++M+R +Y +L Q++ GK
Sbjct: 120 FE-EEVEFLNAHSKSEIVDMLRKHTYKE-ELDQRKRNRDGNGK 160
>TAIR|locus:1005716457 [details] [associations]
symbol:RAP2.9 "related to AP2 9" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624
EMBL:AB073166 EMBL:AY560869 EMBL:BT024689 EMBL:AF003102 EMBL:Z37270
IPI:IPI00535753 RefSeq:NP_849340.1 UniGene:At.47204
ProteinModelPortal:Q8W3M3 SMR:Q8W3M3 EnsemblPlants:AT4G06746.1
GeneID:826148 KEGG:ath:AT4G06746 TAIR:At4g06746 eggNOG:NOG320996
InParanoid:Q8W3M3 OMA:NKLPEAY PhylomeDB:Q8W3M3
ProtClustDB:CLSN2918026 Genevestigator:Q8W3M3 Uniprot:Q8W3M3
Length = 150
Score = 117 (46.2 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 34 KRLRHASAVSKFKGVVPQQNGHWGAQIYANHQR--IWLGTFKSEKDAAMAYDSAAIRLRG 91
KR +S ++KG+ ++ G W A+I ++R IWLG++K+ AA AYD+A LRG
Sbjct: 25 KRNLISSNEKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFYLRG 84
Query: 92 VDSHRNFP 99
+ NFP
Sbjct: 85 PSARLNFP 92
Score = 39 (18.8 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 256 SAEVSGPYVDMKVDLQLQLGQNKKENKVEE 285
+AEV G VD ++ L+ ++ +N NK+ E
Sbjct: 118 AAEV-GARVDAELRLENRMVENLDMNKLPE 146
>TAIR|locus:505006142 [details] [associations]
symbol:CRF7 "AT1G22985" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AF000657 EMBL:AY062541 EMBL:AY093336 EMBL:AY087064
IPI:IPI00540393 RefSeq:NP_564186.1 UniGene:At.27304
ProteinModelPortal:Q8W4I5 SMR:Q8W4I5 IntAct:Q8W4I5
EnsemblPlants:AT1G22985.1 GeneID:838906 KEGG:ath:AT1G22985
TAIR:At1g22985 eggNOG:NOG242741 HOGENOM:HOG000112390
InParanoid:Q8W4I5 OMA:SDPPEVG PhylomeDB:Q8W4I5
ProtClustDB:CLSN2687921 Genevestigator:Q8W4I5 Uniprot:Q8W4I5
Length = 159
Score = 134 (52.2 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 33/76 (43%), Positives = 48/76 (63%)
Query: 30 IPATK-RLRHASA-VSKFKGVVPQQNGHWGAQIYANH-----QRIWLGTFKSEKDAAMAY 82
IPA+ R+ +A KF+GV + G W A+I +RIWLGTF++ ++AA+AY
Sbjct: 58 IPASLLAARNTTANKKKFRGVRQRPWGKWAAEIRCGRVKGRPERIWLGTFETAEEAALAY 117
Query: 83 DSAAIRLRGVDSHRNF 98
D+AAI+L G D+ NF
Sbjct: 118 DNAAIQLIGPDAPTNF 133
>TAIR|locus:2061956 [details] [associations]
symbol:ERF71 "ethylene response factor 71" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0034059 "response to anoxia"
evidence=IGI] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC002535 GO:GO:0034059 HOGENOM:HOG000237624
EMBL:AY074645 IPI:IPI00523940 PIR:T00432 RefSeq:NP_182274.1
UniGene:At.37019 ProteinModelPortal:O22259 SMR:O22259
EnsemblPlants:AT2G47520.1 GeneID:819365 KEGG:ath:AT2G47520
TAIR:At2g47520 eggNOG:NOG247457 InParanoid:O22259 OMA:MALEDYM
PhylomeDB:O22259 ProtClustDB:CLSN2913160 Genevestigator:O22259
Uniprot:O22259
Length = 171
Score = 134 (52.2 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 10 SNGETNVIPELSDSISSTPLIPATKRLRHASAVSKFKGVVPQQNGHWGAQIY--ANHQRI 67
S E + + +S P+ + +R + ++G+ + G W A+I + R+
Sbjct: 15 SESEPSQLGSVSSRKKRKPVSVSEERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRV 74
Query: 68 WLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPWTKITIE 106
WLGTFK+ +AA AYD AAI++RG + NFP T++ E
Sbjct: 75 WLGTFKTADEAARAYDVAAIKIRGRKAKLNFPNTQVEEE 113
>TAIR|locus:2154272 [details] [associations]
symbol:CRF3 "AT5G53290" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0042991 "transcription factor import into nucleus"
evidence=IDA] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048825 "cotyledon development" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0006606 "protein import into
nucleus" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736
GO:GO:0048366 EMBL:AB013388 GO:GO:0048825 GO:GO:0042991
HOGENOM:HOG000237664 EMBL:AY560878 EMBL:BT020244 EMBL:BT021136
IPI:IPI00543130 RefSeq:NP_200141.1 UniGene:At.49792
ProteinModelPortal:Q9FK12 SMR:Q9FK12 IntAct:Q9FK12 PRIDE:Q9FK12
EnsemblPlants:AT5G53290.1 GeneID:835410 KEGG:ath:AT5G53290
TAIR:At5g53290 eggNOG:NOG331684 InParanoid:Q9FK12 OMA:NEITVEP
PhylomeDB:Q9FK12 ProtClustDB:CLSN2686526 Genevestigator:Q9FK12
Uniprot:Q9FK12
Length = 354
Score = 152 (58.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 44/100 (44%), Positives = 57/100 (57%)
Query: 20 LSDSISSTPLIPATKRLRHASAVS------KFKGVVPQQNGHWGAQIYANHQR--IWLGT 71
LS S T PA+ R R + VS KF+GV + G W A+I QR IWLGT
Sbjct: 95 LSSSSDETQS-PASSRQRPNNKVSVSGQIKKFRGVRQRPWGKWAAEIRDPEQRRRIWLGT 153
Query: 72 FKSEKDAAMAYDSAAIRLRGVDSHRNF---PWTKITIEEP 108
F++ ++AA+ YD+AAIRLRG D+ NF P + EEP
Sbjct: 154 FETAEEAAVVYDNAAIRLRGPDALTNFSIPPQEEEEEEEP 193
>TAIR|locus:2136078 [details] [associations]
symbol:CRF1 "AT4G11140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0042991 "transcription factor import into nucleus"
evidence=RCA;IDA] [GO:0048366 "leaf development" evidence=RCA;IMP]
[GO:0048825 "cotyledon development" evidence=RCA;IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0006406 "mRNA export from
nucleus" evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161531
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736
GO:GO:0048366 GO:GO:0048825 GO:GO:0042991 EMBL:AY560849
EMBL:AF080120 EMBL:AL049876 EMBL:BT025176 IPI:IPI00542737
PIR:T01919 RefSeq:NP_192852.1 UniGene:At.33584
ProteinModelPortal:O82503 SMR:O82503 IntAct:O82503 PRIDE:O82503
EnsemblPlants:AT4G11140.1 GeneID:826715 KEGG:ath:AT4G11140
TAIR:At4g11140 eggNOG:NOG254393 HOGENOM:HOG000237664
InParanoid:O82503 OMA:SSWHVED PhylomeDB:O82503
ProtClustDB:CLSN2685996 Genevestigator:O82503 Uniprot:O82503
Length = 287
Score = 149 (57.5 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 38/112 (33%), Positives = 65/112 (58%)
Query: 1 MEEEML-SIISNGETNVIPELSDSISSTPLIPATKRLRHASAVSKFKGVVPQQNGHWGAQ 59
++E +L S++S+ E + + + + P++ T A KF+GV + G W A+
Sbjct: 49 VKEVVLDSVVSDKEKPMKKKRKKRVVTVPVVVTT-------ATRKFRGVRQRPWGKWAAE 101
Query: 60 IY--ANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPWTKIT--IEE 107
I + R+WLGTF + ++AA+ YD+AAI+LRG ++ NFP +T +EE
Sbjct: 102 IRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPPPPVTENVEE 153
>TAIR|locus:2018635 [details] [associations]
symbol:RAP2.6 "related to AP2 6" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009611
"response to wounding" evidence=IEP;RCA] [GO:0006970 "response to
osmotic stress" evidence=IEP] [GO:0009409 "response to cold"
evidence=IEP] [GO:0009651 "response to salt stress"
evidence=IEP;IMP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP;RCA] [GO:0034605 "cellular response to heat"
evidence=IEP] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0009620 "response to fungus" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0045893
GO:GO:0034605 GO:GO:0009753 GO:GO:0009611 GO:GO:0009873
GO:GO:0003677 GO:GO:0009651 GO:GO:0009409 GO:GO:0009414
GO:GO:0003700 GO:GO:0006351 GO:GO:0009658 GO:GO:0009751 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AC005687
EMBL:AY062847 EMBL:AY114582 EMBL:AF003099 IPI:IPI00532143
PIR:D96498 RefSeq:NP_175008.1 UniGene:At.10778
ProteinModelPortal:Q7G1L2 SMR:Q7G1L2 EnsemblPlants:AT1G43160.1
GeneID:840915 KEGG:ath:AT1G43160 TAIR:At1g43160 InParanoid:Q7G1L2
PhylomeDB:Q7G1L2 Genevestigator:Q7G1L2 Uniprot:Q7G1L2
Length = 192
Score = 136 (52.9 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 33/85 (38%), Positives = 49/85 (57%)
Query: 23 SISSTPLIPA---TKRLRHASAVS---KFKGVVPQQNGHWGAQIYANHQ--RIWLGTFKS 74
S+ PLI TK + ++ K++GV + G W A+I H+ R+WLGTF++
Sbjct: 33 SLPPQPLITGSAVTKECESSMSLERPKKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFET 92
Query: 75 EKDAAMAYDSAAIRLRGVDSHRNFP 99
+ AA AYD+AA+R RG + NFP
Sbjct: 93 AEAAARAYDAAALRFRGSKAKLNFP 117
>UNIPROTKB|Q7XKC5 [details] [associations]
symbol:LOC_Os04g58000 "B3 domain-containing protein
Os04g0676600" species:39947 "Oryza sativa Japonica Group"
[GO:0003677 "DNA binding" evidence=IDA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AP008210 EMBL:CM000141
HSSP:Q9ZWM9 ProtClustDB:CLSN2695240 EMBL:AL606668 EMBL:AK072874
EMBL:BR000655 RefSeq:NP_001054257.1 UniGene:Os.53477 PRIDE:Q7XKC5
EnsemblPlants:LOC_Os04g58000.1 GeneID:4337398 KEGG:osa:4337398
Gramene:Q7XKC5 eggNOG:NOG257628 HOGENOM:HOG000241121 OMA:HEKESGA
Uniprot:Q7XKC5
Length = 433
Score = 148 (57.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 43/157 (27%), Positives = 71/157 (45%)
Query: 73 KSEKDAAMAYDSAAIRLRGVDSHRNFPWTKITIEEPNFQSHYSTEAVINMIRDGSYSSRQ 132
K K + + +R +S +N + EP+ SH S + I R R
Sbjct: 239 KKAKKSDIKDQPIVLRRSDTESEKNDELDQTPASEPSSMSHNSANSTI---RFNCREYRV 295
Query: 133 LFQKELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQLVFHDKSMKLWK 192
+ +KELT SDVG + R+V+PK+ A + P + +R K DD +L W
Sbjct: 296 ILRKELTNSDVGNIGRIVMPKRDAEAHLPALHQR---EGVMLKMDDFKLE------TTWN 346
Query: 193 FRYCYWKSSQSFVFT-RGWNRFVKENQLKANDTICFY 228
F+Y +W +++S ++ FVK++ L+ D Y
Sbjct: 347 FKYRFWPNNKSRMYVLESTGGFVKQHVLQTGDIFIIY 383
>UNIPROTKB|Q8VXC3 [details] [associations]
symbol:ebp-89 "Ethylene responsive protein" species:4530
"Oryza sativa" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
EMBL:AJ304840 ProteinModelPortal:Q8VXC3 SMR:Q8VXC3
KEGG:dosa:Os03t0182800-01 Gramene:Q8VXC3 Genevestigator:Q8VXC3
Uniprot:Q8VXC3
Length = 326
Score = 145 (56.1 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 40/107 (37%), Positives = 60/107 (56%)
Query: 2 EEEMLSIISNGETNVIPELS---D-SISSTP---LIPATKRLRHASAVSKFKGVVPQQNG 54
E +S +S+ ++ +P S D S SS P + A R AS SK++GV + +G
Sbjct: 72 ESLAVSCVSSPKSKAVPSFSFSSDVSSSSRPRRRVAAAAAGRRKASKKSKYRGVRLRPSG 131
Query: 55 HWGAQIY--ANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
+ A+I +R+WLGT+ S ++AAMAYD A R+RG + NFP
Sbjct: 132 RFAAEIRDPKKGRRVWLGTYGSAEEAAMAYDREARRIRGKGARLNFP 178
>TAIR|locus:2128429 [details] [associations]
symbol:CRF2 "AT4G23750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0042991 "transcription factor import into
nucleus" evidence=RCA;IDA] [GO:0048825 "cotyledon development"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048364 "root development" evidence=IEP] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0006606 "protein import into
nucleus" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
GO:GO:0009736 EMBL:AL161560 GO:GO:0048825 GO:GO:0042991
EMBL:AL035394 HOGENOM:HOG000237664 ProtClustDB:CLSN2685996
EMBL:AY057475 EMBL:AY140049 EMBL:BT015038 IPI:IPI00549106
PIR:T05607 RefSeq:NP_194106.1 RefSeq:NP_974599.1 UniGene:At.26323
UniGene:At.67317 ProteinModelPortal:Q9SUQ2 SMR:Q9SUQ2 IntAct:Q9SUQ2
EnsemblPlants:AT4G23750.1 EnsemblPlants:AT4G23750.2 GeneID:828475
KEGG:ath:AT4G23750 TAIR:At4g23750 eggNOG:NOG263971
InParanoid:Q9SUQ2 OMA:PRIKFTE PhylomeDB:Q9SUQ2
Genevestigator:Q9SUQ2 Uniprot:Q9SUQ2
Length = 343
Score = 144 (55.7 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 36/89 (40%), Positives = 51/89 (57%)
Query: 21 SDSISSTPLIPATKRLRHASAVSKFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEKDA 78
S+S S P++ AT + KF+GV + G W A+I R+WLGT+ + ++A
Sbjct: 102 SESTVS-PVVSATTT---TTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEA 157
Query: 79 AMAYDSAAIRLRGVDSHRNFPWTKITIEE 107
AM YD+AAI+LRG D+ NF T T E
Sbjct: 158 AMVYDNAAIQLRGPDALTNFSVTPTTATE 186
>TAIR|locus:2060385 [details] [associations]
symbol:AT2G22200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC007168 HOGENOM:HOG000239817
EMBL:AY090378 EMBL:AY143836 IPI:IPI00527119 PIR:B84610
RefSeq:NP_179810.1 UniGene:At.39467 ProteinModelPortal:Q9SIE4
SMR:Q9SIE4 EnsemblPlants:AT2G22200.1 GeneID:816754
KEGG:ath:AT2G22200 TAIR:At2g22200 eggNOG:euNOG21323
InParanoid:Q9SIE4 OMA:EFEEIGS PhylomeDB:Q9SIE4
ProtClustDB:CLSN2683732 Genevestigator:Q9SIE4 Uniprot:Q9SIE4
Length = 261
Score = 141 (54.7 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 54/182 (29%), Positives = 87/182 (47%)
Query: 11 NGETNVIPELSDS-ISSTPLIPATKRLRHASAVSKFKGVVPQQNGHWGAQIYA--NHQRI 67
N + I LS + I L P+T + ++ ++GV + G W A+I N R+
Sbjct: 41 NHRRSTISNLSPNRIRMKNLTPSTSKTKNL-----YRGVRQRHWGKWVAEIRLPKNRTRL 95
Query: 68 WLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPWTKITIEEPN-FQSHYST--EAVINMIR 124
WLGTF++ + AA+AYD AA +LRG + NFP + E+ N S T +A+ +R
Sbjct: 96 WLGTFETAEKAALAYDQAAFQLRGDIAKLNFP--NLIHEDMNPLPSSVDTKLQAICKSLR 153
Query: 125 DGSYSSRQLFQ-KELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHA---ENDKADDVQ 180
Q KE + V L +PK A + P+ E +E + E+ ++D+
Sbjct: 154 KTEEICSVSDQTKEYSVYSVSDKTELFLPK--AELFLPK-REHLETNELSNESPRSDETS 210
Query: 181 LV 182
L+
Sbjct: 211 LL 212
>TAIR|locus:2204730 [details] [associations]
symbol:AT1G77640 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009741 "response to brassinosteroid
stimulus" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC010704 HOGENOM:HOG000237624
ProtClustDB:CLSN2714459 EMBL:AY560843 EMBL:BT012629 EMBL:AK176224
IPI:IPI00519885 PIR:A96806 RefSeq:NP_177887.1 UniGene:At.17793
ProteinModelPortal:Q9CAP4 SMR:Q9CAP4 PRIDE:Q9CAP4
EnsemblPlants:AT1G77640.1 GeneID:844099 KEGG:ath:AT1G77640
TAIR:At1g77640 eggNOG:NOG281332 InParanoid:Q9CAP4 OMA:FLMNIDE
PhylomeDB:Q9CAP4 Genevestigator:Q9CAP4 Uniprot:Q9CAP4
Length = 244
Score = 140 (54.3 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 38/94 (40%), Positives = 54/94 (57%)
Query: 20 LSDSISSTPLIPATKRLRHASA---VSKFKGVVPQQNGHWGAQIYANHQ--RIWLGTFKS 74
LS S SS+ +T LRH S + K+KGV + G W +I A +Q RIWLG++ +
Sbjct: 17 LSHSSSSSS--SSTSALRHQSCKNKIKKYKGVRMRSWGSWVTEIRAPNQKTRIWLGSYST 74
Query: 75 EKDAAMAYDSAAIRLRGVDSHRNFPWTKITIEEP 108
+ AA AYD+A + L+G ++ NFP IT P
Sbjct: 75 AEAAARAYDAALLCLKGPKANLNFP--NITTTSP 106
>TAIR|locus:2135282 [details] [associations]
symbol:AT4G39780 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL022605 EMBL:AL161595
HOGENOM:HOG000239817 EMBL:AY560850 EMBL:BT025719 IPI:IPI00529599
PIR:T05015 RefSeq:NP_195688.1 UniGene:At.2297
ProteinModelPortal:O65665 SMR:O65665 MINT:MINT-7263056 PRIDE:O65665
EnsemblPlants:AT4G39780.1 GeneID:830136 KEGG:ath:AT4G39780
TAIR:At4g39780 eggNOG:NOG292506 InParanoid:O65665 OMA:TEYQESE
PhylomeDB:O65665 ProtClustDB:CLSN2916086 Genevestigator:O65665
Uniprot:O65665
Length = 272
Score = 141 (54.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 32/79 (40%), Positives = 47/79 (59%)
Query: 23 SISSTPLIPATKRLRHASAVSKFKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEKDAAM 80
+I S L P +++ +A ++GV + G W A+I N R+WLGTF + ++AAM
Sbjct: 71 NIISPNLAPKPVPMKNMTAQKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAAM 130
Query: 81 AYDSAAIRLRGVDSHRNFP 99
AYD AA +LRG + NFP
Sbjct: 131 AYDLAAYKLRGEFARLNFP 149
>TAIR|locus:2119555 [details] [associations]
symbol:AT4G13620 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL035528 EMBL:AL161537
EMBL:AY560871 EMBL:BT029729 IPI:IPI00527648 PIR:G85147 PIR:T05231
RefSeq:NP_193098.1 UniGene:At.33355 ProteinModelPortal:Q9SVQ0
SMR:Q9SVQ0 MINT:MINT-7263031 PaxDb:Q9SVQ0 EnsemblPlants:AT4G13620.1
GeneID:826996 KEGG:ath:AT4G13620 TAIR:At4g13620 eggNOG:NOG330371
HOGENOM:HOG000112389 InParanoid:Q9SVQ0 OMA:NEWVEIN PhylomeDB:Q9SVQ0
ProtClustDB:CLSN2713732 Genevestigator:Q9SVQ0 Uniprot:Q9SVQ0
Length = 388
Score = 143 (55.4 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 36/108 (33%), Positives = 60/108 (55%)
Query: 28 PLIPATKRLRHASAVSK-FKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEKDAAMAYDS 84
P+ T+++ + +K ++GV + G W A+I N R+WLGTF++ + AAMAYD+
Sbjct: 214 PMKSKTRKVVQTTTPTKLYRGVRQRHWGKWVAEIRLPRNRTRVWLGTFETAEQAAMAYDT 273
Query: 85 AAIRLRGVDSHRNFPWTKITIEEPNFQSHYST--EAVINMIRDGSYSS 130
AA LRG +H NFP K ++ + + ++ E+ I I S+
Sbjct: 274 AAYILRGEFAHLNFPDLKHQLKSGSLRCMIASLLESKIQQISSSQVSN 321
>TAIR|locus:2201103 [details] [associations]
symbol:DREB26 "dehydration response element-binding
protein 26" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP] [GO:0034605
"cellular response to heat" evidence=IEP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0071497 "cellular response to freezing" evidence=IEP]
[GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0034605
GO:GO:0009753 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009751 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 HOGENOM:HOG000237624 GO:GO:0071497 EMBL:AC013482
EMBL:AK176679 EMBL:BT024616 EMBL:AY085925 IPI:IPI00521591
PIR:D86352 RefSeq:NP_173609.1 UniGene:At.41636
ProteinModelPortal:Q9SFE4 SMR:Q9SFE4 STRING:Q9SFE4 PaxDb:Q9SFE4
PRIDE:Q9SFE4 EnsemblPlants:AT1G21910.1 GeneID:838793
KEGG:ath:AT1G21910 TAIR:At1g21910 eggNOG:NOG318827
InParanoid:Q9SFE4 OMA:YEDADIP PhylomeDB:Q9SFE4
ProtClustDB:CLSN2714459 Genevestigator:Q9SFE4 Uniprot:Q9SFE4
Length = 230
Score = 137 (53.3 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 32/84 (38%), Positives = 48/84 (57%)
Query: 18 PELSDSISSTPLIPATKRLRHASAVSKFKGVVPQQNGHWGAQIYANHQ--RIWLGTFKSE 75
P S S SS+ + K S + K+KGV + G W ++I A +Q RIWLG++ +
Sbjct: 23 PSSSSSSSSSSSSSSCKNKNKKSKIKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTA 82
Query: 76 KDAAMAYDSAAIRLRGVDSHRNFP 99
+ AA AYD A + L+G ++ NFP
Sbjct: 83 EAAARAYDVALLCLKGPQANLNFP 106
>TAIR|locus:2051359 [details] [associations]
symbol:ERF53 "ERF domain 53" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009651
"response to salt stress" evidence=IEP] [GO:2000070 "regulation of
response to water deprivation" evidence=IEP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0003677 GO:GO:0009651
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC006234 EMBL:AY062843 EMBL:AY081659
IPI:IPI00525064 PIR:E84594 RefSeq:NP_179685.1 UniGene:At.27216
ProteinModelPortal:Q9SKT1 SMR:Q9SKT1 STRING:Q9SKT1
EnsemblPlants:AT2G20880.1 GeneID:816622 KEGG:ath:AT2G20880
TAIR:At2g20880 eggNOG:NOG272542 HOGENOM:HOG000112388
InParanoid:Q9SKT1 OMA:SEETGWA PhylomeDB:Q9SKT1
ProtClustDB:CLSN2683557 Genevestigator:Q9SKT1 GO:GO:2000070
Uniprot:Q9SKT1
Length = 336
Score = 141 (54.7 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 32/82 (39%), Positives = 48/82 (58%)
Query: 30 IPATKR-LRHASAVSKFKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEKDAAMAYDSAA 86
+P T+ ++ SA ++GV + G W A+I N R+WLGTF + ++AAMAYD A
Sbjct: 171 LPLTRPPVQPFSATKLYRGVRQRHWGKWVAEIRKPRNRTRLWLGTFDTAEEAAMAYDREA 230
Query: 87 IRLRGVDSHRNFPWTKITIEEP 108
+LRG + NFP + +EP
Sbjct: 231 FKLRGETARLNFPELFLNKQEP 252
>TAIR|locus:2086203 [details] [associations]
symbol:ESE1 "ethylene and salt inducible 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;ISS;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009873 "ethylene mediated
signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AB025608
HOGENOM:HOG000237624 EMBL:AY974196 EMBL:AY560847 EMBL:BT028890
IPI:IPI00539423 RefSeq:NP_188963.2 UniGene:At.50677
ProteinModelPortal:Q9LTC6 SMR:Q9LTC6 EnsemblPlants:AT3G23220.1
GeneID:821900 KEGG:ath:AT3G23220 TAIR:At3g23220 eggNOG:NOG265349
InParanoid:Q9LTC6 OMA:NFPAEAR PhylomeDB:Q9LTC6
ProtClustDB:CLSN2920270 Genevestigator:Q9LTC6 Uniprot:Q9LTC6
Length = 139
Score = 119 (46.9 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 44 KFKGVVPQQNGHWGAQIY--ANH-QRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPW 100
K++GV + G + A+I A H R+WLGTF + +DAA AYD AA +RG + NFP
Sbjct: 13 KYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFPH 72
Query: 101 TKITIEE-PNFQSHYSTEA 118
+++ PN SH + A
Sbjct: 73 EYQMMKDGPN-GSHENAVA 90
>TAIR|locus:2176511 [details] [associations]
symbol:AT5G43410 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB025638 HOGENOM:HOG000237624
EMBL:AY560864 EMBL:DQ447034 EMBL:DQ653344 IPI:IPI00538759
RefSeq:NP_199154.1 UniGene:At.50627 ProteinModelPortal:Q9LSX0
SMR:Q9LSX0 EnsemblPlants:AT5G43410.1 GeneID:834360
KEGG:ath:AT5G43410 TAIR:At5g43410 eggNOG:NOG244602
InParanoid:Q9LSX0 OMA:HEYNMGS PhylomeDB:Q9LSX0
ProtClustDB:CLSN2681785 Genevestigator:Q9LSX0 Uniprot:Q9LSX0
Length = 131
Score = 119 (46.9 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 37/107 (34%), Positives = 55/107 (51%)
Query: 44 KFKGVVPQQNGHWGAQIYAN--H-QRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPW 100
K++GV + G + A+I + H +R+WLGTF + ++AA AYD AA +RG + NFP
Sbjct: 14 KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFP- 72
Query: 101 TKITIEEPNFQSHYSTEAVI----NMIRDGSYSSRQLFQKELTPSDV 143
E N S S+ + + S SSRQ+F+ E V
Sbjct: 73 -----HEYNMGSGVSSSTAMAGSSSASASASSSSRQVFEFEYLDDSV 114
>TAIR|locus:2027171 [details] [associations]
symbol:ORA47 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0002213 "defense response to insect"
evidence=IEP] [GO:0009611 "response to wounding" evidence=IEP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009611 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009607
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AC008263
EMBL:AC013258 HOGENOM:HOG000237624 EMBL:AY128309 EMBL:BT003348
IPI:IPI00547563 PIR:A96779 RefSeq:NP_177631.1 UniGene:At.34825
ProteinModelPortal:Q9S7L5 SMR:Q9S7L5 STRING:Q9S7L5
EnsemblPlants:AT1G74930.1 GeneID:843832 KEGG:ath:AT1G74930
TAIR:At1g74930 eggNOG:NOG268869 InParanoid:Q9S7L5 OMA:HSRERIW
PhylomeDB:Q9S7L5 ProtClustDB:CLSN2914217 Genevestigator:Q9S7L5
Uniprot:Q9S7L5
Length = 195
Score = 130 (50.8 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 27/68 (39%), Positives = 45/68 (66%)
Query: 34 KRLRHASAVSKFKGVVPQQNGHWGAQIYANH--QRIWLGTFKSEKDAAMAYDSAAIRLRG 91
++ R+ + SK+KGV ++ G W ++I H +RIWLG++ + + AA A+D+A LRG
Sbjct: 10 EKKRNTAMQSKYKGVRKRKWGKWVSEIRLPHSRERIWLGSYDTPEKAARAFDAAQFCLRG 69
Query: 92 VDSHRNFP 99
D++ NFP
Sbjct: 70 GDANFNFP 77
>TAIR|locus:2018289 [details] [associations]
symbol:ERF14 "Ethylene-responsive element binding factor
14" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009873
"ethylene mediated signaling pathway" evidence=TAS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006952 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AC000104 HOGENOM:HOG000237624
ProtClustDB:CLSN2681785 EMBL:AY560880 EMBL:BT026421 IPI:IPI00531659
PIR:D86175 RefSeq:NP_171932.1 UniGene:At.50643
ProteinModelPortal:P93822 SMR:P93822 STRING:P93822 PRIDE:P93822
EnsemblPlants:AT1G04370.1 GeneID:839539 KEGG:ath:AT1G04370
TAIR:At1g04370 eggNOG:NOG309663 InParanoid:P93822 OMA:NKTHNIN
PhylomeDB:P93822 Genevestigator:P93822 Uniprot:P93822
Length = 133
Score = 118 (46.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/103 (35%), Positives = 55/103 (53%)
Query: 44 KFKGVVPQQNGHWGAQIYAN--H-QRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPW 100
K++GV + G + A+I + H +R+WLGTF + +DAA AYD AA +RG + NFP
Sbjct: 19 KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFP- 77
Query: 101 TKITIEEPNFQSHYSTEAVINMIRDGSYSSRQLFQKELTPSDV 143
E N + S+ A + S SS+Q+F+ E V
Sbjct: 78 -----HEYNMGTGSSSTAA-----NSSSSSQQVFEFEYLDDSV 110
>TAIR|locus:2055002 [details] [associations]
symbol:ERF13 "ethylene-responsive element binding factor
13" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0002679 "respiratory
burst involved in defense response" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0007165 "signal
transduction" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009873 "ethylene
mediated signaling pathway" evidence=RCA;TAS] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=RCA]
[GO:0043069 "negative regulation of programmed cell death"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0010200 EMBL:AC002388 HOGENOM:HOG000239314
EMBL:AF325089 EMBL:AF370540 EMBL:AY072471 EMBL:AY088387
IPI:IPI00525442 PIR:T00409 RefSeq:NP_182011.1 UniGene:At.29014
ProteinModelPortal:Q8L9K1 SMR:Q8L9K1 STRING:Q8L9K1
EnsemblPlants:AT2G44840.1 GeneID:819093 KEGG:ath:AT2G44840
TAIR:At2g44840 eggNOG:NOG314595 InParanoid:Q8L9K1 OMA:EQKRESH
PhylomeDB:Q8L9K1 ProtClustDB:CLSN2913027 Genevestigator:Q8L9K1
GermOnline:AT2G44840 Uniprot:Q8L9K1
Length = 226
Score = 133 (51.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/98 (37%), Positives = 57/98 (58%)
Query: 9 ISNGETNVIPEL-SDSISSTPLIPATKRL-RHASAVS--KFKGVVPQQNGHWGAQIY--- 61
+S+G T +P + S + + P PATK HA +++GV + G + A+I
Sbjct: 54 VSSGWTPSVPPVTSPAEENKP--PATKASGSHAPRQKGMQYRGVRRRPWGKFAAEIRDPK 111
Query: 62 ANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
N R+WLGT+++ +DAA+AYD AA +LRG + NFP
Sbjct: 112 KNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFP 149
>TAIR|locus:2171840 [details] [associations]
symbol:AT5G65130 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB013395 HOGENOM:HOG000239817
EMBL:AY560858 EMBL:DQ447109 EMBL:DQ653392 EMBL:BT025723
IPI:IPI00516764 RefSeq:NP_201318.1 UniGene:At.50719
ProteinModelPortal:Q9FJQ2 SMR:Q9FJQ2 IntAct:Q9FJQ2 PaxDb:Q9FJQ2
PRIDE:Q9FJQ2 EnsemblPlants:AT5G65130.1 GeneID:836637
KEGG:ath:AT5G65130 TAIR:At5g65130 eggNOG:NOG331618
InParanoid:Q9FJQ2 OMA:ILQIQTE PhylomeDB:Q9FJQ2
ProtClustDB:CLSN2916268 Genevestigator:Q9FJQ2 Uniprot:Q9FJQ2
Length = 277
Score = 135 (52.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 42 VSKFKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
V ++GV +Q G W A+I N R+WLGTF++ ++AA+AYD AA ++RG ++ NFP
Sbjct: 108 VKLYRGVRQRQWGKWVAEIRLPKNRTRLWLGTFETAQEAALAYDQAAHKIRGDNARLNFP 167
>TAIR|locus:2057517 [details] [associations]
symbol:ARF10 "auxin response factor 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0048829 "root cap
development" evidence=IGI;IMP] [GO:0051301 "cell division"
evidence=IGI] [GO:0009734 "auxin mediated signaling pathway"
evidence=IMP] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=IMP] [GO:0009743 "response to carbohydrate
stimulus" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0031540 "regulation of anthocyanin biosynthetic
process" evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048441 "petal development" evidence=IMP] [GO:0048442 "sepal
development" evidence=IMP] [GO:0048589 "developmental growth"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009734 GO:GO:0051301 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0048589 GO:GO:0009743
GO:GO:0048441 GO:GO:0048442 GO:GO:0010154 GO:GO:0035198
GO:GO:0048366 GO:GO:0007389 EMBL:AF099735 EMBL:AC006283
EMBL:AF325073 EMBL:AF336919 EMBL:EU550097 EMBL:EU550098
EMBL:EU550099 EMBL:EU550100 EMBL:EU550101 EMBL:EU550102
EMBL:EU550103 EMBL:EU550104 EMBL:EU550105 EMBL:EU550106
EMBL:EU550107 EMBL:EU550108 EMBL:EU550109 EMBL:EU550110
EMBL:EU550111 EMBL:EU550112 EMBL:EU550113 EMBL:EU550114
EMBL:EU550115 EMBL:EU550116 EMBL:EU550117 EMBL:EU550118
EMBL:EU550119 EMBL:AK228534 IPI:IPI00530405 PIR:G84683
RefSeq:NP_180402.1 UniGene:At.13730 ProteinModelPortal:Q9SKN5
SMR:Q9SKN5 IntAct:Q9SKN5 STRING:Q9SKN5 PRIDE:Q9SKN5
EnsemblPlants:AT2G28350.1 GeneID:817382 KEGG:ath:AT2G28350
GeneFarm:3383 TAIR:At2g28350 eggNOG:NOG315592 InParanoid:Q9SKN5
OMA:ERESGRC PhylomeDB:Q9SKN5 ProtClustDB:CLSN2913131
ArrayExpress:Q9SKN5 Genevestigator:Q9SKN5 GermOnline:AT2G28350
GO:GO:0031540 Uniprot:Q9SKN5
Length = 693
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 48/178 (26%), Positives = 80/178 (44%)
Query: 93 DSHRNFPWTKITIEE-PNFQSHYSTEAVINMI---RDGSYSSRQL---FQKELTPSDVGK 145
D+ + + KIT+ P +AV+ + DG+ + ++ F K LT SD
Sbjct: 67 DAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAKTLTQSDANN 126
Query: 146 LNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQLVFHDKSMKLWKFRYCYWKSSQSFV 205
+P+ A FP++ E + A D+ H ++ WKFR+ Y + + +
Sbjct: 127 GGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDI----HGET---WKFRHIYRGTPRRHL 179
Query: 206 FTRGWNRFVKENQLKANDTICFYLCELRDIAKGTKTFGMIDAKKGENSGASAEVSGPY 263
T GW+ FV + +L A D+I F E D+ G + AK+G G++A PY
Sbjct: 180 LTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRR-----AKRG-GLGSNAGSDNPY 231
>UNIPROTKB|A4LBC0 [details] [associations]
symbol:LFL1 "B3 domain-containing protein LFL1"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908
GO:GO:0048573 EMBL:AP008207 eggNOG:NOG309510 EMBL:EF521182
EMBL:AP003410 EMBL:AK109920 RefSeq:NP_001044053.1 UniGene:Os.8988
GeneID:4325939 KEGG:dosa:Os01t0713600-01 KEGG:osa:4325939
Gramene:A4LBC0 OMA:YKDDENN ProtClustDB:CLSN2691771 Uniprot:A4LBC0
Length = 402
Score = 137 (53.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 33/100 (33%), Positives = 56/100 (56%)
Query: 131 RQLFQKELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQLVFHD-KSMK 189
R + QKEL SDV +L R+V+PKK A Y P ++ + + K+ L HD ++ +
Sbjct: 178 RVILQKELRYSDVSQLGRIVLPKKEAEAYLPILTSK-----DGKKS----LCMHDLQNAQ 228
Query: 190 LWKFRYCYWKSSQSFVFT-RGWNRFVKENQLKANDTICFY 228
LW F+Y YW +++S ++ +V+ + L+ D+I Y
Sbjct: 229 LWTFKYRYWPNNKSRMYVLENTGDYVRTHDLQLGDSIVIY 268
>UNIPROTKB|Q6Z1Z3 [details] [associations]
symbol:IDEF1 "B3 domain-containing protein IDEF1"
species:39947 "Oryza sativa Japonica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
GO:GO:0005634 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0044212 EMBL:AP008214
EMBL:CM000145 EMBL:AP005406 EMBL:AK107456 EMBL:BR000654
RefSeq:NP_001060757.1 UniGene:Os.13809 STRING:Q6Z1Z3
EnsemblPlants:LOC_Os08g01090.1 GeneID:4344415
KEGG:dosa:Os08t0101000-01 KEGG:osa:4344415 Gramene:Q6Z1Z3
eggNOG:NOG307468 HOGENOM:HOG000070867 OMA:KFIIRGE
ProtClustDB:CLSN2695240 Uniprot:Q6Z1Z3
Length = 362
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 49/162 (30%), Positives = 75/162 (46%)
Query: 83 DSAAIRLRGVDSHRNFPWTKITIEEPNFQSHYSTEAVINMIRDGSYSSRQLFQKELTPSD 142
D R V+ H T T+ E Q H S ++ G Y + + +KELT SD
Sbjct: 210 DELETRNSNVEFHSE---TVGTLPESK-QGHDSRAT--KLLNSGEY--QVILRKELTKSD 261
Query: 143 VGKLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQLVFHDKSMKL-WKFRYCYWKSS 201
VG + R+V+PKK A P + +R D + L D + + WKF+Y YW ++
Sbjct: 262 VGNVGRIVLPKKDAEASLPPLLQR----------DPLILHMDDMVLPVTWKFKYRYWPNN 311
Query: 202 QSFVFTR-GWNRFVKENQLKANDTICFY--LCELRDIAKGTK 240
+S ++ F+K + L+A D I Y L + I +G K
Sbjct: 312 KSRMYILDSAGEFLKTHGLQAGDVIIIYKNLAPGKFIIRGEK 353
>TAIR|locus:2005704 [details] [associations]
symbol:AT1G75490 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=IEP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006950 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010200 EMBL:AC006434 EMBL:AK175902 IPI:IPI00536836
RefSeq:NP_177681.2 UniGene:At.34770 UniGene:At.74106
ProteinModelPortal:Q9LQZ2 SMR:Q9LQZ2 PaxDb:Q9LQZ2 PRIDE:Q9LQZ2
EnsemblPlants:AT1G75490.1 GeneID:843885 KEGG:ath:AT1G75490
GeneFarm:3662 TAIR:At1g75490 eggNOG:NOG311950 HOGENOM:HOG000033697
InParanoid:Q9LQZ2 OMA:ISWEHIN PhylomeDB:Q9LQZ2
ProtClustDB:CLSN2714736 Genevestigator:Q9LQZ2 GermOnline:AT1G75490
Uniprot:Q9LQZ2
Length = 206
Score = 129 (50.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 40 SAVSKFKGVVPQQNGHWGAQIYANHQ--RIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRN 97
+A +KGV + G W A+I ++ R+WLGTF + ++AA+AYDSAA +L G ++H N
Sbjct: 37 NASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSREAALAYDSAARKLYGPEAHLN 96
Query: 98 FP 99
P
Sbjct: 97 LP 98
>TAIR|locus:2123708 [details] [associations]
symbol:AT4G28140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=IEP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010200 HSSP:O80337 EMBL:AL161572 HOGENOM:HOG000112388
EMBL:DQ011579 EMBL:AY074574 EMBL:AY097394 IPI:IPI00520768
PIR:T09030 RefSeq:NP_194543.1 UniGene:At.32043 UniGene:At.72101
ProteinModelPortal:Q9M0J3 SMR:Q9M0J3 PRIDE:Q9M0J3
EnsemblPlants:AT4G28140.1 GeneID:828929 KEGG:ath:AT4G28140
TAIR:At4g28140 eggNOG:NOG269342 InParanoid:Q9M0J3 OMA:DQKEPET
PhylomeDB:Q9M0J3 ProtClustDB:CLSN2915905 Genevestigator:Q9M0J3
Uniprot:Q9M0J3
Length = 292
Score = 133 (51.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 38/107 (35%), Positives = 54/107 (50%)
Query: 41 AVSKFKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNF 98
A ++GV +Q G W A+I + R+WLGTF + ++AAMAYD A +LRG + NF
Sbjct: 139 ATKLYRGVRQRQWGKWVAEIRKPRSRARLWLGTFDTAEEAAMAYDRQAFKLRGHSATLNF 198
Query: 99 PWTKITIEEPNFQSHYSTEAVINMIRDGSYSSRQLFQKELTPSDVGK 145
P + E S+ S + + S L KEL DVG+
Sbjct: 199 PEHFVNKESELHDSNSSDQKEPETPQP---SEVNLESKELPVIDVGR 242
>TAIR|locus:2026301 [details] [associations]
symbol:CRF8 "AT1G71130" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016036 "cellular
response to phosphate starvation" evidence=RCA] [GO:0019375
"galactolipid biosynthetic process" evidence=RCA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 EMBL:AC016972
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000112390
ProtClustDB:CLSN2687921 EMBL:AK175578 EMBL:AK175683 EMBL:AK175740
EMBL:AK175774 EMBL:AK175931 EMBL:AK176043 EMBL:AK176144
EMBL:AK176280 EMBL:BT025618 EMBL:AY085910 IPI:IPI00531448
PIR:H96735 RefSeq:NP_565012.1 UniGene:At.35227 UniGene:At.74176
ProteinModelPortal:Q9C995 SMR:Q9C995 IntAct:Q9C995
EnsemblPlants:AT1G71130.1 GeneID:843453 KEGG:ath:AT1G71130
TAIR:At1g71130 eggNOG:NOG245226 InParanoid:Q9C995 OMA:RIIRISF
PhylomeDB:Q9C995 Genevestigator:Q9C995 Uniprot:Q9C995
Length = 161
Score = 117 (46.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 30 IPATKRLRHASAVSKFKGVVPQQNGHWGAQIYANH-------QRIWLGTFKSEKDAAMAY 82
IPA + L+ A K++GV + G W A+I R+WLGTF + ++AA+AY
Sbjct: 65 IPA-EFLKTAKTEKKYRGVRQRPWGKWVAEIRCGRGACKGRRDRLWLGTFNTAEEAALAY 123
Query: 83 DSAAIRLRGVDSHRNF 98
D+A+I+L G + NF
Sbjct: 124 DNASIKLIGPHAPTNF 139
>TAIR|locus:2132962 [details] [associations]
symbol:CRF4 "AT4G27950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0042991 "transcription factor import into nucleus"
evidence=IDA] [GO:0048366 "leaf development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 GO:GO:0005737 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
GO:GO:0009736 EMBL:AL161572 GO:GO:0048366 EMBL:AL035524
GO:GO:0042991 HOGENOM:HOG000237664 ProtClustDB:CLSN2686526
EMBL:BT033088 EMBL:AY560872 IPI:IPI00529666 PIR:T02896
RefSeq:NP_194524.2 UniGene:At.49716 ProteinModelPortal:Q9SUE3
SMR:Q9SUE3 IntAct:Q9SUE3 EnsemblPlants:AT4G27950.1 GeneID:828908
KEGG:ath:AT4G27950 TAIR:At4g27950 eggNOG:NOG284469
InParanoid:Q9SUE3 OMA:FLEPEQE Genevestigator:Q9SUE3 Uniprot:Q9SUE3
Length = 335
Score = 134 (52.2 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 44 KFKGVVPQQNGHWGAQIYANHQR--IWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNF 98
K++GV + G W A+I QR IWLGTF + ++AA+ YD+AAI+LRG D+ NF
Sbjct: 117 KYRGVRQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNF 173
>TAIR|locus:2124504 [details] [associations]
symbol:AT4G18450 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0010200 "response to chitin" evidence=IEP]
[GO:0006457 "protein folding" evidence=RCA] [GO:0009408 "response
to heat" evidence=RCA] [GO:0009644 "response to high light
intensity" evidence=RCA] [GO:0042542 "response to hydrogen
peroxide" evidence=RCA] [GO:0009873 "ethylene mediated signaling
pathway" evidence=TAS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0010200 HSSP:O80337 EMBL:AL161548
EMBL:AL021710 EMBL:AY560868 IPI:IPI00543138 PIR:T04541
RefSeq:NP_193580.1 UniGene:At.32901 ProteinModelPortal:O49515
SMR:O49515 EnsemblPlants:AT4G18450.1 GeneID:827576
KEGG:ath:AT4G18450 TAIR:At4g18450 eggNOG:NOG286829
HOGENOM:HOG000241588 OMA:EWTEILD PhylomeDB:O49515
ProtClustDB:CLSN2915846 Genevestigator:O49515 Uniprot:O49515
Length = 303
Score = 133 (51.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 37/101 (36%), Positives = 59/101 (58%)
Query: 4 EMLSIISN--GETNVIPELSDSISSTPLIPATKRLRHASAVSKFKGVVPQQNGHWGAQIY 61
E+L I++ +TN P + +I S L + R+ + K++GV + G + A+I
Sbjct: 72 EILDAIASFPNKTNHDPLTNPTIDSCSL---SSRV--SCKTRKYRGVRKRPWGKFAAEIR 126
Query: 62 ---ANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVD-SHRNF 98
N R+WLGTF++ ++AAMAYD AA+R+RG +H NF
Sbjct: 127 DSTRNGVRVWLGTFQTAEEAAMAYDKAAVRIRGTQKAHTNF 167
>TAIR|locus:2170101 [details] [associations]
symbol:ERF110 "ethylene response factor 110"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048510 "regulation of timing of transition from vegetative to
reproductive phase" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AB026650
EMBL:AJ580378 IPI:IPI00543457 RefSeq:NP_199819.3 UniGene:At.29751
ProteinModelPortal:Q70II3 SMR:Q70II3 STRING:Q70II3
EnsemblPlants:AT5G50080.1 GeneID:835072 KEGG:ath:AT5G50080
TAIR:At5g50080 eggNOG:NOG295694 HOGENOM:HOG000210042
InParanoid:Q70II3 OMA:EDLINYW PhylomeDB:Q70II3
ProtClustDB:CLSN2920550 Genevestigator:Q70II3 Uniprot:Q70II3
Length = 220
Score = 128 (50.1 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 44 KFKGVVPQQNGHWGAQIYANHQ--RIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
+++GV + G W A+I H+ R+WLGTF + + AA AYD AA+R RG + NFP
Sbjct: 76 RYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFP 133
>TAIR|locus:2015061 [details] [associations]
symbol:AT1G22190 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006970 "response to osmotic stress" evidence=IEP] [GO:0009409
"response to cold" evidence=IEP] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0009409 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0006970 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 HOGENOM:HOG000239817 EMBL:AC073942 EMBL:BT000907
IPI:IPI00529569 PIR:E86354 RefSeq:NP_173638.1 UniGene:At.25524
UniGene:At.26676 UniGene:At.70046 ProteinModelPortal:Q9LM15
SMR:Q9LM15 MINT:MINT-7262777 STRING:Q9LM15 PaxDb:Q9LM15
PRIDE:Q9LM15 EnsemblPlants:AT1G22190.1 GeneID:838824
KEGG:ath:AT1G22190 TAIR:At1g22190 eggNOG:NOG261785
InParanoid:Q9LM15 OMA:QAICATI PhylomeDB:Q9LM15
ProtClustDB:CLSN2914396 Genevestigator:Q9LM15 Uniprot:Q9LM15
Length = 261
Score = 130 (50.8 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 36/105 (34%), Positives = 52/105 (49%)
Query: 21 SDSISSTPLIPATKRLRHASAVSKFKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEKDA 78
S +S P+ A ++GV + G W A+I N R+WLGTF + ++A
Sbjct: 59 SHHLSPKPVSMKQTGTSAAKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEA 118
Query: 79 AMAYDSAAIRLRGVDSHRNFPWTKITIEEPNFQSHYSTEAVINMI 123
A+AYD AA +LRG + NFP + E QS S +A + I
Sbjct: 119 ALAYDKAAYKLRGDFARLNFPDLRHNDEYQPLQS--SVDAKLEAI 161
>TAIR|locus:2086213 [details] [associations]
symbol:TDR1 "Transcriptional Regulator of Defense
Response 1" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS;TAS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0009873 "ethylene
mediated signaling pathway" evidence=RCA;TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200 HSSP:O80337
EMBL:AB025608 HOGENOM:HOG000237624 EMBL:AJ580377 IPI:IPI00538070
RefSeq:NP_188964.2 UniGene:At.37741 ProteinModelPortal:Q9LTC5
SMR:Q9LTC5 STRING:Q9LTC5 EnsemblPlants:AT3G23230.1 GeneID:821901
KEGG:ath:AT3G23230 TAIR:At3g23230 eggNOG:NOG239208
InParanoid:Q9LTC5 OMA:DKQARFR PhylomeDB:Q9LTC5
ProtClustDB:CLSN2918542 Genevestigator:Q9LTC5 Uniprot:Q9LTC5
Length = 139
Score = 112 (44.5 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 43 SKFKGVVPQQNGHWGAQIY---ANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
++F+GV + G + A+I N R+WLGTF++ ++AA AYD AA LRG + NFP
Sbjct: 18 ARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNFP 77
>TAIR|locus:2129116 [details] [associations]
symbol:ERF-1 "ethylene responsive element binding factor
1" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IDA] [GO:0005643 "nuclear pore"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009738 "abscisic acid mediated
signaling pathway" evidence=RCA] [GO:0009873 "ethylene mediated
signaling pathway" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006952
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200 EMBL:Z97343
EMBL:AL161546 EMBL:AY058174 EMBL:AY062533 EMBL:BT002578
EMBL:AB008103 IPI:IPI00518702 PIR:A85196 PIR:T51988
RefSeq:NP_567530.4 UniGene:At.23185 UniGene:At.68141 PDB:1GCC
PDB:2GCC PDB:3GCC PDBsum:1GCC PDBsum:2GCC PDBsum:3GCC
ProteinModelPortal:O80337 SMR:O80337 STRING:O80337
EnsemblPlants:AT4G17500.1 GeneID:827464 KEGG:ath:AT4G17500
TAIR:At4g17500 eggNOG:NOG246525 HOGENOM:HOG000239314
InParanoid:O80337 OMA:PVYCRST PhylomeDB:O80337
ProtClustDB:CLSN2715394 EvolutionaryTrace:O80337
Genevestigator:O80337 GermOnline:AT4G17500 Uniprot:O80337
Length = 268
Score = 129 (50.5 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 35/99 (35%), Positives = 55/99 (55%)
Query: 18 PELSDSISSTPLIPA-TKRLRHASAVSK---FKGVVPQQNGHWGAQIY---ANHQRIWLG 70
PE ++ S P+ T + A +K ++GV + G + A+I N R+WLG
Sbjct: 117 PESFAAVDSVPVKKEKTSPVSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLG 176
Query: 71 TFKSEKDAAMAYDSAAIRLRGVDSHRNFPWTKITIEEPN 109
TF++ +DAA+AYD AA R+RG + NFP ++ EP+
Sbjct: 177 TFETAEDAALAYDRAAFRMRGSRALLNFP-LRVNSGEPD 214
>TAIR|locus:2173063 [details] [associations]
symbol:AT5G52020 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0050832 "defense response to fungus"
evidence=IEP] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0050832
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB015478 HOGENOM:HOG000237624
EMBL:AK176464 EMBL:AY086443 IPI:IPI00519238 RefSeq:NP_200015.1
UniGene:At.58041 ProteinModelPortal:Q9FJ90 SMR:Q9FJ90
EnsemblPlants:AT5G52020.1 GeneID:835277 KEGG:ath:AT5G52020
TAIR:At5g52020 eggNOG:NOG256892 InParanoid:Q9FJ90 OMA:SPENHEG
PhylomeDB:Q9FJ90 ProtClustDB:CLSN2916850 Genevestigator:Q9FJ90
Uniprot:Q9FJ90
Length = 232
Score = 127 (49.8 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 45/145 (31%), Positives = 65/145 (44%)
Query: 14 TNVIPELSDSISSTPL------IPATKRLRHASAV-SKFKGVVPQQNGHWGAQIYANHQ- 65
T+ P+ S SS+P PA + S S F+G+ +NG W ++I +
Sbjct: 27 TDQSPQTSPGSSSSPSPRPSGGSPARRTATGLSGKHSIFRGI-RLRNGKWVSEIREPRKT 85
Query: 66 -RIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPWTKITIEEPNFQSHYSTEAVINMIR 124
RIWLGT+ + AA AYD AA+ L+G D+ NFP +T P S A +
Sbjct: 86 TRIWLGTYPVPEMAAAAYDVAALALKGPDAVLNFPGLALTYVAPVSNSAADIRAAASRAA 145
Query: 125 DGSYSSRQLFQKELTPSDVGKLNRL 149
+ + +K L P GK L
Sbjct: 146 EMKQPDQGGDEKVLEPVQPGKEEEL 170
>TAIR|locus:2148022 [details] [associations]
symbol:SHN2 "shine2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL360314 HOGENOM:HOG000237624
EMBL:AY560865 IPI:IPI00534793 RefSeq:NP_196680.1 UniGene:At.70314
ProteinModelPortal:Q9LFN7 SMR:Q9LFN7 PRIDE:Q9LFN7
EnsemblPlants:AT5G11190.1 GeneID:830989 KEGG:ath:AT5G11190
TAIR:At5g11190 eggNOG:NOG292617 InParanoid:Q9LFN7 OMA:DQLAMEM
PhylomeDB:Q9LFN7 ProtClustDB:CLSN2692546 Genevestigator:Q9LFN7
Uniprot:Q9LFN7
Length = 189
Score = 123 (48.4 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 44 KFKGVVPQQNGHWGAQIYAN--HQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPWT 101
KF+GV +Q G W ++I +R+WLGTF++ + AA AYD AA+ + G ++ NFP
Sbjct: 6 KFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPVV 65
Query: 102 K 102
K
Sbjct: 66 K 66
>TAIR|locus:2076621 [details] [associations]
symbol:AT3G57600 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010093 "specification of floral organ
identity" evidence=RCA] [GO:0048440 "carpel development"
evidence=RCA] [GO:0048507 "meristem development" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006950 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AL049660
EMBL:AY087243 EMBL:AK227217 EMBL:BT028945 IPI:IPI00530394
PIR:T06760 RefSeq:NP_191319.1 UniGene:At.34819
ProteinModelPortal:Q9SVX5 SMR:Q9SVX5 EnsemblPlants:AT3G57600.1
GeneID:824929 KEGG:ath:AT3G57600 GeneFarm:3672 TAIR:At3g57600
eggNOG:NOG289602 HOGENOM:HOG000239781 InParanoid:Q9SVX5 OMA:ARLWLGS
PhylomeDB:Q9SVX5 ProtClustDB:CLSN2684573 Genevestigator:Q9SVX5
GermOnline:AT3G57600 Uniprot:Q9SVX5
Length = 277
Score = 129 (50.5 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 30/83 (36%), Positives = 48/83 (57%)
Query: 19 ELSDSISSTPLIPATKRLRHASAVSKFKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEK 76
E S S+ PA + +A+ +++GV + G W A+I R+WLG+F + +
Sbjct: 2 EKSSSMKQWKKGPARGKGGPQNALCQYRGVRQRTWGKWVAEIREPKKRARLWLGSFATAE 61
Query: 77 DAAMAYDSAAIRLRGVDSHRNFP 99
+AAMAYD AA++L G D++ N P
Sbjct: 62 EAAMAYDEAALKLYGHDAYLNLP 84
>TAIR|locus:2064417 [details] [associations]
symbol:HSI2 "high-level expression of sugar-inducible
gene 2" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009737 "response to abscisic acid stimulus" evidence=TAS]
[GO:0009744 "response to sucrose stimulus" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0010030 "positive regulation of seed germination"
evidence=IGI] [GO:2000034 "regulation of seed maturation"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005739
GO:GO:0009737 GO:GO:0005634 GO:GO:0045892 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0010030
GO:GO:0009744 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936 EMBL:U93215
HSSP:Q9ZWM9 EMBL:AB206553 EMBL:AY062492 IPI:IPI00532565 PIR:G84708
RefSeq:NP_850146.1 UniGene:At.27438 ProteinModelPortal:Q8W4L5
SMR:Q8W4L5 IntAct:Q8W4L5 STRING:Q8W4L5 PaxDb:Q8W4L5 PRIDE:Q8W4L5
EnsemblPlants:AT2G30470.1 GeneID:817597 KEGG:ath:AT2G30470
TAIR:At2g30470 eggNOG:NOG244543 HOGENOM:HOG000084353
InParanoid:Q8W4L5 OMA:CMNASCG PhylomeDB:Q8W4L5
ProtClustDB:CLSN2918136 Genevestigator:Q8W4L5 GO:GO:2000034
Uniprot:Q8W4L5
Length = 790
Score = 136 (52.9 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 34/121 (28%), Positives = 61/121 (50%)
Query: 108 PNFQSHYSTEAVINMIRDGSYSSRQLFQKELTPSDVGKLNRLVIPKKYAVKYFPQISERV 167
P + Y+ + V + + + + LF+K L+ SD G++ RLV+PK A YFP IS+
Sbjct: 269 PRYWPKYTDKEVQQISGNLNLNIVPLFEKTLSASDAGRIGRLVLPKACAEAYFPPISQ-- 326
Query: 168 EEHAENDKADDVQLVFHDKSMKLWKFRYCYWKSSQSFVFT-RGWNRFVKENQLKANDTIC 226
++ + L D + W F++ YW ++ S ++ G ++ L+A DT+
Sbjct: 327 --------SEGIPLKIQDVRGREWTFQFRYWPNNNSRMYVLEGVTPCIQSMMLQAGDTVT 378
Query: 227 F 227
F
Sbjct: 379 F 379
>TAIR|locus:2129111 [details] [associations]
symbol:AT4G16750 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=ISS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:Z97341 EMBL:AL161544 HOGENOM:HOG000237624
ProtClustDB:CLSN2683800 EMBL:AY560874 EMBL:BT011576 EMBL:BT020592
IPI:IPI00533818 PIR:F85186 RefSeq:NP_193408.1 UniGene:At.33050
ProteinModelPortal:Q9SUK8 SMR:Q9SUK8 EnsemblPlants:AT4G16750.1
GeneID:827379 KEGG:ath:AT4G16750 TAIR:At4g16750 eggNOG:NOG310275
InParanoid:Q9SUK8 OMA:MQDSSSH PhylomeDB:Q9SUK8
Genevestigator:Q9SUK8 Uniprot:Q9SUK8
Length = 179
Score = 121 (47.7 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 32 ATKRLRHASAVSK---FKGVVPQQNGHWGAQIYANHQ--RIWLGTFKSEKDAAMAYDSAA 86
++K VSK F+GV +Q G W ++I + RIWLGTF + + AA A+D AA
Sbjct: 24 SSKTKNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAA 83
Query: 87 IRLRGVDSHRNFP 99
+ ++G +H NFP
Sbjct: 84 LAIKGGSAHLNFP 96
>TAIR|locus:2032170 [details] [associations]
symbol:LEC2 "LEAFY COTYLEDON 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0010262 "somatic embryogenesis" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0010344 "seed
oilbody biogenesis" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0010601 "positive regulation of auxin
biosynthetic process" evidence=IMP] InterPro:IPR003340 Pfam:PF02362
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010262 GO:GO:0010431 EMBL:AC021044
EMBL:AF400123 EMBL:AF400124 EMBL:AJ630496 EMBL:AY568668
EMBL:DQ446296 EMBL:DQ652865 IPI:IPI00516936 PIR:C86409
RefSeq:NP_564304.1 UniGene:At.26290 ProteinModelPortal:Q1PFR7
SMR:Q1PFR7 STRING:Q1PFR7 EnsemblPlants:AT1G28300.1 GeneID:839724
KEGG:ath:AT1G28300 TAIR:At1g28300 eggNOG:NOG295110
HOGENOM:HOG000113311 OMA:NEGRENE PhylomeDB:Q1PFR7
ProtClustDB:CLSN2688053 Genevestigator:Q1PFR7 GO:GO:0010601
GO:GO:0010344 Uniprot:Q1PFR7
Length = 363
Score = 131 (51.2 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 35/106 (33%), Positives = 57/106 (53%)
Query: 131 RQLFQKELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQLVFHDKSMKL 190
R L +KEL SDVG L R+V+PK+ A P++S++ E D VF SM+
Sbjct: 168 RVLCEKELKNSDVGSLGRIVLPKRDAEANLPKLSDK--EGIVVQMRD----VF---SMQS 218
Query: 191 WKFRYCYWKSSQSFVFT-RGWNRFVKENQLKANDTICFYLCELRDI 235
W F+Y +W +++S ++ FVK+N + D + Y E +++
Sbjct: 219 WSFKYKFWSNNKSRMYVLENTGEFVKQNGAEIGDFLTIYEDESKNL 264
>TAIR|locus:2171514 [details] [associations]
symbol:ERF2 "ethylene responsive element binding factor
2" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IDA] [GO:0009873
"ethylene mediated signaling pathway" evidence=RCA;TAS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0009864 "induced systemic resistance,
jasmonic acid mediated signaling pathway" evidence=IMP] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0002679 "respiratory
burst involved in defense response" evidence=RCA] [GO:0009693
"ethylene biosynthetic process" evidence=RCA] [GO:0009723 "response
to ethylene stimulus" evidence=RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=RCA] [GO:0035556 "intracellular
signal transduction" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200
EMBL:AB018117 HOGENOM:HOG000239314 EMBL:AB008104 EMBL:AK175151
EMBL:AK175229 EMBL:AK176532 EMBL:AK176606 EMBL:AK176825
EMBL:BT024470 EMBL:AY086983 IPI:IPI00521608 PIR:T51989
RefSeq:NP_199533.1 UniGene:At.19731 ProteinModelPortal:O80338
SMR:O80338 STRING:O80338 PRIDE:O80338 EnsemblPlants:AT5G47220.1
GeneID:834768 KEGG:ath:AT5G47220 TAIR:At5g47220 eggNOG:NOG285540
InParanoid:O80338 KO:K14517 OMA:TPSSCFT PhylomeDB:O80338
ProtClustDB:CLSN2914897 Genevestigator:O80338 GermOnline:AT5G47220
GO:GO:0009864 Uniprot:O80338
Length = 243
Score = 127 (49.8 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 32/83 (38%), Positives = 48/83 (57%)
Query: 30 IPATKRLRHASAVSKFKGVVPQQNGHWGAQIY---ANHQRIWLGTFKSEKDAAMAYDSAA 86
IP T+ A ++GV + G + A+I N R+WLGTF++ +DAA+AYD AA
Sbjct: 105 IPVTET---AVKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAA 161
Query: 87 IRLRGVDSHRNFPWTKITIEEPN 109
R+RG + NFP ++ EP+
Sbjct: 162 FRMRGSRALLNFP-LRVNSGEPD 183
>TAIR|locus:2034295 [details] [associations]
symbol:AT1G36060 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC006228 EMBL:AC021666
EMBL:BT005758 EMBL:BT006078 EMBL:AK228415 IPI:IPI00549083
PIR:E86482 RefSeq:NP_564468.1 UniGene:At.39425
ProteinModelPortal:Q9SKW5 SMR:Q9SKW5 STRING:Q9SKW5
EnsemblPlants:AT1G36060.1 GeneID:840510 KEGG:ath:AT1G36060
TAIR:At1g36060 eggNOG:NOG329700 HOGENOM:HOG000239817
InParanoid:Q9SKW5 OMA:YKSASTS PhylomeDB:Q9SKW5
ProtClustDB:CLSN2914986 Genevestigator:Q9SKW5 Uniprot:Q9SKW5
Length = 314
Score = 129 (50.5 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 45 FKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
++GV + G W A+I N R+WLGTF + ++AA+AYD AA +LRG + NFP
Sbjct: 143 YRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDRAAFKLRGDSARLNFP 199
>TAIR|locus:2037698 [details] [associations]
symbol:SHN1 "SHINE 1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0010166 "wax metabolic process" evidence=IMP]
[GO:0010143 "cutin biosynthetic process" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IPI] [GO:0009873 "ethylene
mediated signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009873 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:AC007591 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 GO:GO:0010143 HOGENOM:HOG000237624
ProtClustDB:CLSN2692546 EMBL:AY378101 EMBL:AK117941 EMBL:BT005220
EMBL:AY085720 IPI:IPI00534091 PIR:B86288 RefSeq:NP_172988.1
UniGene:At.11422 ProteinModelPortal:Q9XI33 SMR:Q9XI33 STRING:Q9XI33
EnsemblPlants:AT1G15360.1 GeneID:838105 KEGG:ath:AT1G15360
TAIR:At1g15360 eggNOG:NOG290838 InParanoid:Q9XI33 OMA:DTASSHI
Genevestigator:Q9XI33 GO:GO:0010166 Uniprot:Q9XI33
Length = 199
Score = 123 (48.4 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 44 KFKGVVPQQNGHWGAQIYAN--HQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
KF+GV + G W A+I +RIWLGTF++ ++AA AYD AA+ + G ++ NFP
Sbjct: 6 KFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFP 63
>TAIR|locus:2145477 [details] [associations]
symbol:SHN3 "shine3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006950
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC006258
HOGENOM:HOG000237624 ProtClustDB:CLSN2692546 EMBL:AK118780
EMBL:BT005461 EMBL:BX834028 IPI:IPI00539200 IPI:IPI00541689
RefSeq:NP_197921.1 RefSeq:NP_851073.1 UniGene:At.19636
ProteinModelPortal:Q3E958 SMR:Q3E958 IntAct:Q3E958
EnsemblPlants:AT5G25390.2 GeneID:832611 KEGG:ath:AT5G25390
TAIR:At5g25390 eggNOG:NOG243679 InParanoid:Q3E958 OMA:LDNDSSH
PhylomeDB:Q3E958 Genevestigator:Q3E958 Uniprot:Q3E958
Length = 189
Score = 121 (47.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 26/61 (42%), Positives = 37/61 (60%)
Query: 44 KFKGVVPQQNGHWGAQIYAN--HQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPWT 101
KF+GV +Q G W ++I +R+WLGTF + + AA AYD AA+ + G + NFP
Sbjct: 6 KFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPVI 65
Query: 102 K 102
K
Sbjct: 66 K 66
>TAIR|locus:2197076 [details] [associations]
symbol:RAP2.12 "related to AP2 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0001666 "response to hypoxia"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070483 "detection of hypoxia" evidence=IEP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005634 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC009324 GO:GO:0070483 HOGENOM:HOG000237624
EMBL:AY037260 EMBL:AY057545 EMBL:AY113051 EMBL:AY088204
EMBL:AF003105 IPI:IPI00535772 PIR:D96579 RefSeq:NP_001031185.1
RefSeq:NP_175794.1 UniGene:At.20952 UniGene:At.21295
ProteinModelPortal:Q9SSA8 SMR:Q9SSA8 IntAct:Q9SSA8 STRING:Q9SSA8
EnsemblPlants:AT1G53910.1 EnsemblPlants:AT1G53910.2 GeneID:841829
KEGG:ath:AT1G53910 TAIR:At1g53910 eggNOG:NOG262386
InParanoid:Q9SSA8 OMA:NEDAVTT PhylomeDB:Q9SSA8
ProtClustDB:CLSN2682146 Genevestigator:Q9SSA8 Uniprot:Q9SSA8
Length = 358
Score = 129 (50.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 43 SKFKGVVPQQNGHWGAQIYANHQ--RIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
++++G+ + G W A+I + RIWLGTFK+ ++AA AYD+AA R+RG + NFP
Sbjct: 123 NQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFP 181
>TAIR|locus:2008021 [details] [associations]
symbol:ERF3 "ethylene responsive element binding factor
3" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IDA] [GO:0010105
"negative regulation of ethylene mediated signaling pathway"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009414 "response to water deprivation"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0042538 "hyperosmotic salinity response"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006952 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010105 EMBL:AC079279
HOGENOM:HOG000237624 EMBL:AB008105 EMBL:AC012561 EMBL:BT025295
EMBL:AK228091 IPI:IPI00534661 IPI:IPI00837459 PIR:T52011
RefSeq:NP_175479.1 UniGene:At.1645 UniGene:At.71718
ProteinModelPortal:O80339 SMR:O80339 IntAct:O80339 STRING:O80339
EnsemblPlants:AT1G50640.1 GeneID:841486 KEGG:ath:AT1G50640
TAIR:At1g50640 eggNOG:NOG251938 InParanoid:O80339 OMA:TKRYPRT
PhylomeDB:O80339 ProtClustDB:CLSN2682907 Genevestigator:O80339
GermOnline:AT1G50640 Uniprot:O80339
Length = 225
Score = 124 (48.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 29/70 (41%), Positives = 40/70 (57%)
Query: 44 KFKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPWT 101
+F+GV + G + A+I R+WLGTF S ++AA AYDSAA LRG + NFP
Sbjct: 27 RFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFPID 86
Query: 102 KITIEEPNFQ 111
+ PN +
Sbjct: 87 SSSPPPPNLR 96
>TAIR|locus:2009655 [details] [associations]
symbol:ERF8 "ethylene response factor 8" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009873 "ethylene mediated
signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC008007 Gene3D:3.30.730.10 SUPFAM:SSF54171
HOGENOM:HOG000237624 ProtClustDB:CLSN2679790 EMBL:AB036884
EMBL:AK117541 EMBL:BT005401 IPI:IPI00546471 PIR:D96572
RefSeq:NP_175725.1 UniGene:At.4604 ProteinModelPortal:Q9MAI5
SMR:Q9MAI5 IntAct:Q9MAI5 EnsemblPlants:AT1G53170.1 GeneID:841751
KEGG:ath:AT1G53170 TAIR:At1g53170 eggNOG:NOG271218
InParanoid:Q9MAI5 OMA:HESNAAK PhylomeDB:Q9MAI5
Genevestigator:Q9MAI5 GermOnline:AT1G53170 Uniprot:Q9MAI5
Length = 185
Score = 120 (47.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 30/87 (34%), Positives = 46/87 (52%)
Query: 17 IPELSDSISSTPLIPATKRLRHASAVSK---FKGVVPQQNGHWGAQIY--ANHQRIWLGT 71
+P ++ + P+ P T H S +K ++GV + G + A+I R+WLGT
Sbjct: 1 MPNITMGLKPDPVAP-TNPTHHESNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGT 59
Query: 72 FKSEKDAAMAYDSAAIRLRGVDSHRNF 98
F + + AA AYD+AA RGV + NF
Sbjct: 60 FDTAQQAARAYDAAARDFRGVKAKTNF 86
>TAIR|locus:2183174 [details] [associations]
symbol:RAP2.11 "related to AP2 11" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0000302 "response to reactive
oxygen species" evidence=IEP] [GO:0009723 "response to ethylene
stimulus" evidence=IEP] [GO:0035865 "cellular response to potassium
ion" evidence=IEP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0048528 "post-embryonic root development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=TAS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0009723 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0000302 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 GO:GO:0035865
EMBL:AF296838 GO:GO:0048528 EMBL:AF003104 EMBL:AY560854
IPI:IPI00543417 RefSeq:NP_197480.1 UniGene:At.49039
UniGene:At.71012 ProteinModelPortal:Q6J9S1 SMR:Q6J9S1 STRING:Q6J9S1
EnsemblPlants:AT5G19790.1 GeneID:832099 KEGG:ath:AT5G19790
TAIR:At5g19790 eggNOG:NOG268154 HOGENOM:HOG000242199
InParanoid:Q6J9S1 OMA:IERQISA PhylomeDB:Q6J9S1
ProtClustDB:CLSN2713867 Genevestigator:Q6J9S1 Uniprot:Q6J9S1
Length = 253
Score = 125 (49.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 43 SKFKGVVPQQNGHWGAQIYANHQRI--WLGTFKSEKDAAMAYDSAAIRLRGVDSHRNF 98
+KF GV + +G W A+I Q+I WLGTF++ ++AA AYD AA LRG ++ NF
Sbjct: 20 TKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNF 77
>TAIR|locus:2093166 [details] [associations]
symbol:ABI3 "AT3G24650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0009657 "plastid organization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009790 "embryo
development" evidence=IEP] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0031930 "mitochondria-nucleus signaling
pathway" evidence=IDA] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA] [GO:0016114 "terpenoid
biosynthetic process" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005829 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0009733
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:X68141
EMBL:AJ002473 EMBL:AP000740 EMBL:AK220739 EMBL:AK220879
EMBL:AB253328 EMBL:EF597723 EMBL:EF597724 EMBL:EF597725
EMBL:EF597726 EMBL:EF597727 EMBL:EF597728 EMBL:EF597729
EMBL:EF597730 EMBL:EF597731 EMBL:EF597732 EMBL:EF597733
EMBL:EF597734 EMBL:EF597735 EMBL:EF597736 EMBL:EF597737
EMBL:EF597738 EMBL:EF597739 EMBL:EF597740 EMBL:EF597741
EMBL:EF597743 EMBL:EF597744 IPI:IPI00527803 PIR:JQ1676
RefSeq:NP_189108.1 UniGene:At.19959 ProteinModelPortal:Q01593
SMR:Q01593 IntAct:Q01593 STRING:Q01593 EnsemblPlants:AT3G24650.1
GeneID:822061 KEGG:ath:AT3G24650 TAIR:At3g24650 eggNOG:NOG318581
InParanoid:Q01593 OMA:VWNMRYR PhylomeDB:Q01593
ProtClustDB:CLSN2684517 Genevestigator:Q01593 GermOnline:AT3G24650
GO:GO:0009790 GO:GO:0031930 GO:GO:0009657 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Uniprot:Q01593
Length = 720
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 34/100 (34%), Positives = 50/100 (50%)
Query: 131 RQLFQKELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQLVFHD-KSMK 189
R L QK L SDVG L R+V+PKK A + P++ R D + L D + +
Sbjct: 569 RFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEAR----------DGISLAMEDIGTSR 618
Query: 190 LWKFRYCYWKSSQSFVFT-RGWNRFVKENQLKANDTICFY 228
+W RY +W +++S ++ FVK N L+ D I Y
Sbjct: 619 VWNMRYRFWPNNKSRMYLLENTGDFVKTNGLQEGDFIVIY 658
>TAIR|locus:2183861 [details] [associations]
symbol:Rap2.6L "related to AP2 6l" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0009723 "response to ethylene stimulus" evidence=IEP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP]
[GO:0009751 "response to salicylic acid stimulus" evidence=IEP]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0071497 "cellular response to freezing"
evidence=IEP] [GO:0009407 "toxin catabolic process" evidence=RCA]
[GO:0010260 "organ senescence" evidence=RCA] [GO:0010583 "response
to cyclopentenone" evidence=RCA] [GO:0046482 "para-aminobenzoic
acid metabolic process" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0009737 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0009753 GO:GO:0009873
GO:GO:0009723 GO:GO:0003677 GO:GO:0009651 GO:GO:0009414
GO:GO:0003700 GO:GO:0006351 GO:GO:0009751 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL163491 EMBL:AY560861
EMBL:BT011609 EMBL:BT012250 IPI:IPI00516288 PIR:T48580
RefSeq:NP_196837.1 UniGene:At.32083 UniGene:At.67565
UniGene:At.75194 ProteinModelPortal:Q9LYU3 SMR:Q9LYU3 IntAct:Q9LYU3
STRING:Q9LYU3 PaxDb:Q9LYU3 PRIDE:Q9LYU3 EnsemblPlants:AT5G13330.1
GeneID:831174 KEGG:ath:AT5G13330 TAIR:At5g13330 eggNOG:NOG270575
HOGENOM:HOG000112331 InParanoid:Q9LYU3 OMA:PRRRHYR PhylomeDB:Q9LYU3
ProtClustDB:CLSN2916600 Genevestigator:Q9LYU3 GO:GO:0071497
Uniprot:Q9LYU3
Length = 212
Score = 122 (48.0 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 45 FKGVVPQQNGHWGAQIYANHQ--RIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
++GV + G W A+I + R+WLGTF++ ++AA+AYD AA++ +G + NFP
Sbjct: 39 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFP 95
>TAIR|locus:2151576 [details] [associations]
symbol:AT5G61590 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009414 "response to water deprivation"
evidence=IEP] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB012239 HOGENOM:HOG000272710
EMBL:AY045968 EMBL:AY079321 EMBL:AY085939 IPI:IPI00538118
RefSeq:NP_200967.1 UniGene:At.24138 ProteinModelPortal:Q9FKG2
SMR:Q9FKG2 STRING:Q9FKG2 EnsemblPlants:AT5G61590.1 GeneID:836280
KEGG:ath:AT5G61590 TAIR:At5g61590 eggNOG:NOG268094
InParanoid:Q9FKG2 OMA:TSPEVET PhylomeDB:Q9FKG2
ProtClustDB:CLSN2686928 Genevestigator:Q9FKG2 Uniprot:Q9FKG2
Length = 201
Score = 121 (47.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 34/93 (36%), Positives = 50/93 (53%)
Query: 10 SNGETNVIPELSDSISSTPLIPATKRLRHASAVSKFKGVVPQQNGHWGAQIY---ANHQR 66
S+ T PE+ +++S+ + RH ++GV + G + A+I R
Sbjct: 79 SSSSTTTSPEV-ETVSNRKKTKRFEETRH------YRGVRRRPWGKFAAEIRDPAKKGSR 131
Query: 67 IWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
IWLGTF+S+ DAA AYD AA +LRG + NFP
Sbjct: 132 IWLGTFESDIDAARAYDYAAFKLRGRKAVLNFP 164
>TAIR|locus:2087065 [details] [associations]
symbol:ERF4 "ethylene responsive element binding factor
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IDA] [GO:0010105
"negative regulation of ethylene mediated signaling pathway"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0009723 "response to ethylene
stimulus" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0009864 "induced systemic resistance, jasmonic acid mediated
signaling pathway" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0009737
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045892 GO:GO:0009873
GO:GO:0009723 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200 GO:GO:0010105
GO:GO:0016604 HOGENOM:HOG000237624 GO:GO:0009864 EMBL:AF003098
EMBL:AB008106 EMBL:AP000413 EMBL:AY140030 EMBL:BT010325
EMBL:AY086232 IPI:IPI00539614 PIR:T52019 RefSeq:NP_188139.1
UniGene:At.47551 ProteinModelPortal:O80340 SMR:O80340 IntAct:O80340
STRING:O80340 EnsemblPlants:AT3G15210.1 GeneID:820752
KEGG:ath:AT3G15210 TAIR:At3g15210 eggNOG:NOG298559
InParanoid:O80340 OMA:DCASPPT PhylomeDB:O80340
ProtClustDB:CLSN2679790 Genevestigator:O80340 GermOnline:AT3G15210
Uniprot:O80340
Length = 222
Score = 122 (48.0 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 31 PATKRLRHASAVS-KFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEKDAAMAYDSAAI 87
PAT H +A +++GV + G + A+I R+WLGTF + ++AA AYD+AA
Sbjct: 10 PATTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAR 69
Query: 88 RLRGVDSHRNFP 99
RG + NFP
Sbjct: 70 DFRGAKAKTNFP 81
>TAIR|locus:2029491 [details] [associations]
symbol:RAP2.4 "related to AP2 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IC;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006970 "response to osmotic
stress" evidence=IEP] [GO:0071472 "cellular response to salt
stress" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IEP;IMP] [GO:0009416 "response to light stimulus"
evidence=IEP] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0009873 "ethylene mediated signaling pathway" evidence=IMP]
[GO:0010017 "red or far-red light signaling pathway" evidence=IGI]
[GO:0009611 "response to wounding" evidence=IEP] [GO:0009736
"cytokinin mediated signaling pathway" evidence=IMP] [GO:0045595
"regulation of cell differentiation" evidence=IMP] [GO:0009409
"response to cold" evidence=IEP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009611
GO:GO:0009873 GO:GO:0045595 GO:GO:0009409 GO:GO:0009414
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736
GO:GO:0071472 GO:GO:0010017 EMBL:AC009243 EMBL:AC012680
HOGENOM:HOG000239817 UniGene:At.25524 EMBL:AF370152 EMBL:AY150468
EMBL:AF003097 IPI:IPI00519366 RefSeq:NP_177931.1 UniGene:At.71798
ProteinModelPortal:Q8H1E4 SMR:Q8H1E4 MINT:MINT-7262714
STRING:Q8H1E4 EnsemblPlants:AT1G78080.1 GeneID:844143
KEGG:ath:AT1G78080 TAIR:At1g78080 eggNOG:NOG306355
InParanoid:Q8H1E4 OMA:KLEAICK PhylomeDB:Q8H1E4
ProtClustDB:CLSN2679481 Genevestigator:Q8H1E4 Uniprot:Q8H1E4
Length = 334
Score = 126 (49.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 45 FKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
++GV + G W A+I N R+WLGTF + ++AA+AYD AA +LRG + NFP
Sbjct: 152 YRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFP 208
>TAIR|locus:2058764 [details] [associations]
symbol:ERF38 "ERF family protein 38" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IGI] [GO:0009834 "secondary cell wall
biogenesis" evidence=TAS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC006068 GO:GO:0009834
HOGENOM:HOG000237624 EMBL:AY560845 EMBL:DQ446600 EMBL:DQ653042
EMBL:BT025754 IPI:IPI00524895 PIR:H84771 RefSeq:NP_181113.1
UniGene:At.50671 ProteinModelPortal:Q9ZQP3 SMR:Q9ZQP3
EnsemblPlants:AT2G35700.1 GeneID:818139 KEGG:ath:AT2G35700
TAIR:At2g35700 eggNOG:NOG276561 InParanoid:Q9ZQP3 OMA:MDVETSS
PhylomeDB:Q9ZQP3 ProtClustDB:CLSN2683800 Genevestigator:Q9ZQP3
Uniprot:Q9ZQP3
Length = 194
Score = 119 (46.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 31/77 (40%), Positives = 43/77 (55%)
Query: 31 PATKRLRH---ASAVSK---FKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEKDAAMAY 82
P KR + VSK F+GV +Q G W ++I RIWLGTF + + AA A+
Sbjct: 25 PKKKRAKDDDDEKVVSKHPNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAH 84
Query: 83 DSAAIRLRGVDSHRNFP 99
D AA+ ++G +H NFP
Sbjct: 85 DVAALAIKGGSAHLNFP 101
>TAIR|locus:2825329 [details] [associations]
symbol:AT1G71450 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC016163 HOGENOM:HOG000237624
EMBL:BT010764 EMBL:BT011790 IPI:IPI00540458 RefSeq:NP_177301.1
UniGene:At.43565 UniGene:At.66830 ProteinModelPortal:Q9C9I2
SMR:Q9C9I2 EnsemblPlants:AT1G71450.1 GeneID:843486
KEGG:ath:AT1G71450 TAIR:At1g71450 eggNOG:NOG312881
InParanoid:Q9C9I2 OMA:DSIRMAV PhylomeDB:Q9C9I2
ProtClustDB:CLSN2914602 Genevestigator:Q9C9I2 Uniprot:Q9C9I2
Length = 183
Score = 117 (46.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 32/98 (32%), Positives = 51/98 (52%)
Query: 43 SKFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPW 100
S ++GV ++ G W ++I RIWLG+F++ + AA AYD AA RG ++ NFP
Sbjct: 22 SAYRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAATAYDVAAFHFRGREARLNFPE 81
Query: 101 TKITIEEPNFQSHYST-----EAVINMIRDGSYSSRQL 133
++ P S S EA + +G+ S+ Q+
Sbjct: 82 LASSLPRPADSSSDSIRMAVHEATLCRTTEGTESAMQV 119
>TAIR|locus:2086223 [details] [associations]
symbol:ERF1 "ethylene response factor 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0006952
"defense response" evidence=IMP] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=TAS] [GO:0009873 "ethylene
mediated signaling pathway" evidence=IGI;TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006952 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB025608
GO:GO:0009867 HOGENOM:HOG000237624 EMBL:AF076277 EMBL:AF076278
EMBL:AF428390 EMBL:AY133629 EMBL:AY086078 IPI:IPI00537111
RefSeq:NP_188965.1 UniGene:At.6341 UniGene:At.74125
ProteinModelPortal:Q8LDC8 SMR:Q8LDC8 PaxDb:Q8LDC8 PRIDE:Q8LDC8
EnsemblPlants:AT3G23240.1 GeneID:821902 KEGG:ath:AT3G23240
GeneFarm:4728 TAIR:At3g23240 eggNOG:NOG331104 InParanoid:Q8LDC8
KO:K14516 OMA:NDSEEMF PhylomeDB:Q8LDC8 ProtClustDB:CLSN2914712
Genevestigator:Q8LDC8 GermOnline:AT3G23240 Uniprot:Q8LDC8
Length = 218
Score = 120 (47.3 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 37/139 (26%), Positives = 68/139 (48%)
Query: 34 KRLRHASAVSKFKGVVPQQNGHWGAQIY---ANHQRIWLGTFKSEKDAAMAYDSAAIRLR 90
K + + ++GV + G + A+I N R+WLGTF+S ++AA+AYD AA +R
Sbjct: 71 KSVSSRKSEKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMR 130
Query: 91 GVDSHRNFPWTKI--TIEEPNFQSHYSTEAVINMIRDGSYSSRQLFQKELTPSDVG---- 144
G + NF ++ ++ E + V+ + R S R++ K+ SD
Sbjct: 131 GSSAILNFSAERVQESLSEIKYTYEDGCSPVVALKRKHSMR-RRMTNKKTKDSDFDHRSV 189
Query: 145 KLNRLVIPKKYAVKYFPQI 163
KL+ +V+ + +Y ++
Sbjct: 190 KLDNVVVFEDLGEQYLEEL 208
>TAIR|locus:2031890 [details] [associations]
symbol:ESR1 "ENHANCER OF SHOOT REGENERATION 1"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009735
"response to cytokinin stimulus" evidence=IEP] [GO:0009887 "organ
morphogenesis" evidence=IMP] [GO:0010084 "specification of organ
axis polarity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009880 "embryonic pattern specification"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005634 GO:GO:0009735 GO:GO:0009734 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736 EMBL:AC007357
GO:GO:0009880 GO:GO:0048825 GO:GO:0010084 EMBL:AF353577
IPI:IPI00546326 PIR:G86263 RefSeq:NP_172758.1 UniGene:At.28308
ProteinModelPortal:Q9SAD4 SMR:Q9SAD4 IntAct:Q9SAD4 STRING:Q9SAD4
EnsemblPlants:AT1G12980.1 GeneID:837856 KEGG:ath:AT1G12980
TAIR:At1g12980 eggNOG:NOG305471 HOGENOM:HOG000112399
InParanoid:Q9SAD4 OMA:CAYDSAA ProtClustDB:CLSN2914228
Genevestigator:Q9SAD4 Uniprot:Q9SAD4
Length = 328
Score = 124 (48.7 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 28/74 (37%), Positives = 44/74 (59%)
Query: 40 SAVSKFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRN 97
S+ ++++GV + G + A+I + +R WLGTF + + AA AYDSAA RG + N
Sbjct: 52 SSTTRYRGVRRRPWGRYAAEIRDPMSKERRWLGTFDTAEQAACAYDSAARAFRGAKARTN 111
Query: 98 FPW-TKITIEEPNF 110
F + T + + EP F
Sbjct: 112 FTYPTAVIMPEPRF 125
>TAIR|locus:2194007 [details] [associations]
symbol:ERF73 "ethylene response factor 73" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;IDA] [GO:0034059 "response to
anoxia" evidence=IGI] [GO:0009873 "ethylene mediated signaling
pathway" evidence=IMP;TAS] [GO:0071369 "cellular response to
ethylene stimulus" evidence=IMP] [GO:0071456 "cellular response to
hypoxia" evidence=IEP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0071456 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0034059 UniGene:At.35111 IPI:IPI00541631
RefSeq:NP_001077812.1 UniGene:At.68119 ProteinModelPortal:F4IDA7
SMR:F4IDA7 EnsemblPlants:AT1G72360.2 GeneID:843568
KEGG:ath:AT1G72360 OMA:KKHEPND Uniprot:F4IDA7
Length = 262
Score = 122 (48.0 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 43 SKFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
S++KG+ + G W A+I R+WLGTF + ++AA AYD A R+RG + NFP
Sbjct: 74 SRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFP 132
>TAIR|locus:2195985 [details] [associations]
symbol:AT1G77200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 EMBL:AC004260 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624
EMBL:AY560875 EMBL:DQ446437 EMBL:DQ652938 IPI:IPI00531080
PIR:T00449 RefSeq:NP_177844.1 UniGene:At.50584
ProteinModelPortal:O80654 SMR:O80654 EnsemblPlants:AT1G77200.1
GeneID:844056 KEGG:ath:AT1G77200 TAIR:At1g77200 eggNOG:NOG297347
InParanoid:O80654 OMA:DENGISM PhylomeDB:O80654
ProtClustDB:CLSN2912844 Genevestigator:O80654 Uniprot:O80654
Length = 244
Score = 121 (47.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 39/137 (28%), Positives = 63/137 (45%)
Query: 7 SIISNGETNVIPELSDSISSTPLIPATKRLRHASAVSKFKGVVPQQNGHWGAQIYANHQ- 65
SIIS +++ +PE D T + + ++GV + G W ++I +
Sbjct: 5 SIISVKQSSPVPEEEDHHHHQQDSHRTNTKKRVRSDPGYRGVRMRTWGKWVSEIREPRKK 64
Query: 66 -RIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPWTKITIEEPNFQSHYSTEAV--INM 122
RIWLGTF + + AA A+D+AA+ ++G + NFP + P S +A +
Sbjct: 65 SRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAAAVAA 124
Query: 123 IRDGSYSSRQLFQKELT 139
D S SS L + T
Sbjct: 125 AMDFSPSSSSLVVSDPT 141
>TAIR|locus:2024249 [details] [associations]
symbol:ERF10 "ERF domain protein 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009873 "ethylene mediated signaling pathway"
evidence=TAS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 EMBL:AC003027
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HOGENOM:HOG000237624
EMBL:AB047649 EMBL:AY560879 IPI:IPI00526738 PIR:E86168
RefSeq:NP_171876.1 UniGene:At.50567 ProteinModelPortal:Q9ZWA2
SMR:Q9ZWA2 STRING:Q9ZWA2 EnsemblPlants:AT1G03800.1 GeneID:839173
KEGG:ath:AT1G03800 TAIR:At1g03800 eggNOG:NOG291029 OMA:QTAVEEP
PhylomeDB:Q9ZWA2 ProtClustDB:CLSN2914355 Genevestigator:Q9ZWA2
Uniprot:Q9ZWA2
Length = 245
Score = 121 (47.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 44 KFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
+++GV + G + A+I +R+WLG+F + ++AA AYDSAAIR RG + NFP
Sbjct: 52 RYRGVRRRPWGRYAAEIRDPVKKKRVWLGSFNTGEEAARAYDSAAIRFRGSKATTNFP 109
>TAIR|locus:2116592 [details] [associations]
symbol:HSL1 "HSI2-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;RCA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0010030 "positive regulation of seed
germination" evidence=IGI] [GO:2000034 "regulation of seed
maturation" evidence=IGI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048316 "seed development" evidence=RCA]
[GO:0048366 "leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0010030 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AL021636 EMBL:AL161580 HSSP:Q9ZWM9 eggNOG:NOG244543
HOGENOM:HOG000084353 GO:GO:2000034 EMBL:AB206554 EMBL:AK228013
IPI:IPI00541402 IPI:IPI00931064 PIR:T04644 RefSeq:NP_194929.2
UniGene:At.1885 ProteinModelPortal:Q5CCK4 SMR:Q5CCK4 STRING:Q5CCK4
PaxDb:Q5CCK4 PRIDE:Q5CCK4 EnsemblPlants:AT4G32010.1 GeneID:829332
KEGG:ath:AT4G32010 TAIR:At4g32010 InParanoid:Q5CCK4 OMA:MNALCGA
PhylomeDB:Q5CCK4 ProtClustDB:CLSN2918602 Genevestigator:Q5CCK4
Uniprot:Q5CCK4
Length = 780
Score = 128 (50.1 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 40/130 (30%), Positives = 61/130 (46%)
Query: 133 LFQKELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQLVFHDKSMKLWK 192
LF+K L+ SD G++ RLV+PK A YFP IS + + L D K W
Sbjct: 285 LFEKVLSASDAGRIGRLVLPKACAEAYFPPIS----------LPEGLPLKIQDIKGKEWV 334
Query: 193 FRYCYWKSSQSFVFT-RGWNRFVKENQLKANDTICFYLCELRDIAKGTKTFGMIDAKKGE 251
F++ +W ++ S ++ G ++ QL+A DT+ F E +G G +K
Sbjct: 335 FQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRTE----PEGKLVMGY---RKAT 387
Query: 252 NSGASAEVSG 261
NS A+ G
Sbjct: 388 NSTATQMFKG 397
>TAIR|locus:2089368 [details] [associations]
symbol:EBP "ethylene-responsive element binding protein"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity"
evidence=IEA;ISS;IDA;IMP;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0051707 "response to other
organism" evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0008219 "cell
death" evidence=IMP] [GO:0010286 "heat acclimation" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009753 "response
to jasmonic acid stimulus" evidence=IEP] [GO:0009873 "ethylene
mediated signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0009735
GO:GO:0009753 GO:GO:0006950 GO:GO:0009873 GO:GO:0003677
GO:GO:0008219 GO:GO:0003700 GO:GO:0006351 GO:GO:0051707 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB022217
HOGENOM:HOG000237624 EMBL:Y09942 EMBL:Z37504 EMBL:AF003096
EMBL:AY059917 EMBL:AY035100 EMBL:AY142562 EMBL:AY087488
IPI:IPI00516463 RefSeq:NP_188299.1 UniGene:At.24773
ProteinModelPortal:P42736 SMR:P42736 IntAct:P42736 STRING:P42736
EnsemblPlants:AT3G16770.1 GeneID:820929 KEGG:ath:AT3G16770
TAIR:At3g16770 eggNOG:NOG300006 InParanoid:P42736 OMA:WSELDAS
PhylomeDB:P42736 ProtClustDB:CLSN2684019 Genevestigator:P42736
GermOnline:AT3G16770 Uniprot:P42736
Length = 248
Score = 120 (47.3 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 32 ATKRLRHASAVSKFKGVVPQQNGHWGAQIYANHQ--RIWLGTFKSEKDAAMAYDSAAIRL 89
AT+ + + ++G+ + G W A+I + R+WLGTF + ++AAMAYD AA ++
Sbjct: 66 ATEPGKRRKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDVAAKQI 125
Query: 90 RGVDSHRNFP 99
RG + NFP
Sbjct: 126 RGDKAKLNFP 135
>TAIR|locus:2156171 [details] [associations]
symbol:AT5G61890 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0050832 "defense response to fungus"
evidence=IEP] [GO:0006865 "amino acid transport" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0050832 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AB022212 EMBL:AY560862 IPI:IPI00539427
RefSeq:NP_200995.1 UniGene:At.29079 ProteinModelPortal:Q9FH54
SMR:Q9FH54 PaxDb:Q9FH54 PRIDE:Q9FH54 EnsemblPlants:AT5G61890.1
GeneID:836310 KEGG:ath:AT5G61890 TAIR:At5g61890 eggNOG:NOG273323
HOGENOM:HOG000057294 InParanoid:Q9FH54 OMA:FSARSQH PhylomeDB:Q9FH54
ProtClustDB:CLSN2686950 ArrayExpress:Q9FH54 Genevestigator:Q9FH54
Uniprot:Q9FH54
Length = 248
Score = 120 (47.3 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 26/80 (32%), Positives = 48/80 (60%)
Query: 45 FKGVVPQQNGHWGAQIYANHQ--RIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPWTK 102
++GV + G W A+I + R+WLGTF++ + AA+AYD AA++ +G + NFP +
Sbjct: 90 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFP-ER 148
Query: 103 ITIEEPNFQSHYSTEAVINM 122
+ + + ++YS+ + M
Sbjct: 149 VQLGSNS--TYYSSNQIPQM 166
>TAIR|locus:2155680 [details] [associations]
symbol:AIL7 "AINTEGUMENTA-like 7" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0060771 "phyllotactic
patterning" evidence=IGI] [GO:0010492 "maintenance of shoot apical
meristem identity" evidence=IGI] [GO:0009887 "organ morphogenesis"
evidence=ISS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010492 HOGENOM:HOG000239258 KO:K09285 GO:GO:0060771
EMBL:AB026639 EMBL:AY560887 IPI:IPI00522908 RefSeq:NP_201354.5
UniGene:At.50720 ProteinModelPortal:Q6J9N8 SMR:Q6J9N8
EnsemblPlants:AT5G65510.1 GeneID:836677 KEGG:ath:AT5G65510
TAIR:At5g65510 eggNOG:NOG295896 InParanoid:Q6J9N8 OMA:HVVESST
Genevestigator:Q6J9N8 Uniprot:Q6J9N8
Length = 498
Score = 125 (49.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 28/67 (41%), Positives = 43/67 (64%)
Query: 43 SKFKGVVPQ-QNGHWGAQI--YANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
S ++GV Q G W A+I A ++ ++LGTF +E++AA AYD AAI+ RG+++ NF
Sbjct: 332 SIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGINAVTNFE 391
Query: 100 WTKITIE 106
+ IE
Sbjct: 392 MNRYDIE 398
>TAIR|locus:2131849 [details] [associations]
symbol:DREB1A "dehydration response element B1A"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009409
"response to cold" evidence=IEP;RCA;IDA;IMP;TAS] [GO:0009414
"response to water deprivation" evidence=RCA;IMP;IDA] [GO:0009631
"cold acclimation" evidence=IMP] [GO:0005982 "starch metabolic
process" evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 GO:GO:0009631 EMBL:AL022197 EMBL:AL161563 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB007787 EMBL:AB013815
EMBL:AF074602 EMBL:AF076155 EMBL:AF062924 EMBL:AY667247
EMBL:AY691904 EMBL:DQ372533 EMBL:DQ415923 EMBL:BT024594
IPI:IPI00534240 PIR:D85294 PIR:JE0297 PIR:T05799 PIR:T51830
RefSeq:NP_567720.1 UniGene:At.231 ProteinModelPortal:Q9M0L0
SMR:Q9M0L0 STRING:Q9M0L0 PRIDE:Q9M0L0 EnsemblPlants:AT4G25480.1
GeneID:828652 KEGG:ath:AT4G25480 GeneFarm:3593 TAIR:At4g25480
eggNOG:NOG303203 InParanoid:Q9M0L0 PhylomeDB:Q9M0L0
ProtClustDB:CLSN2687445 Genevestigator:Q9M0L0 GermOnline:AT4G25480
Uniprot:Q9M0L0
Length = 216
Score = 118 (46.6 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 33/94 (35%), Positives = 53/94 (56%)
Query: 7 SIISNGETNVIPELSDSISSTPLIPATKRLRHASAVSKFKGVVPQQNGHWGAQIYANHQ- 65
S+ S G+ IP L+ SS P PA ++ + ++GV + +G W ++ ++
Sbjct: 18 SVSSGGD--YIPTLA---SSCPKKPAGRKKFRETRHPIYRGVRRRNSGKWVCEVREPNKK 72
Query: 66 -RIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNF 98
RIWLGTF++ + AA A+D AA+ LRG + NF
Sbjct: 73 TRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 106
>TAIR|locus:2044845 [details] [associations]
symbol:HRD "HARDY" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0050832 "defense
response to fungus" evidence=IEP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009873 GO:GO:0050832 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC006919 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 HOGENOM:HOG000237624 EMBL:AY560867 EMBL:DQ446604
EMBL:DQ653045 IPI:IPI00534962 PIR:H84780 RefSeq:NP_181186.1
UniGene:At.64963 ProteinModelPortal:Q9SJR0 SMR:Q9SJR0
EnsemblPlants:AT2G36450.1 GeneID:818219 KEGG:ath:AT2G36450
TAIR:At2g36450 eggNOG:NOG251289 InParanoid:Q9SJR0 OMA:REPRKPN
PhylomeDB:Q9SJR0 ProtClustDB:CLSN2716339 Genevestigator:Q9SJR0
Uniprot:Q9SJR0
Length = 184
Score = 115 (45.5 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 45 FKGVVPQQNGH-WGAQIYANHQ--RIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPWT 101
++GV ++N + W ++I + RIWLGTF + + AA+AYD AA+ L+G + NFP +
Sbjct: 15 YRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAELNFPNS 74
Query: 102 KITIEEPNFQSHYSTEA 118
++ P S +A
Sbjct: 75 VSSLPAPTSMSPADIQA 91
>TAIR|locus:2032500 [details] [associations]
symbol:ERF11 "ERF domain protein 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0007154 "cell communication" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009863 "salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0009873 "ethylene mediated signaling
pathway" evidence=RCA;TAS] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=RCA] [GO:0043069 "negative regulation of
programmed cell death" evidence=RCA] [GO:0050832 "defense response
to fungus" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HOGENOM:HOG000237624 EMBL:AB055882 EMBL:AC010155
EMBL:AF360232 EMBL:AY040032 EMBL:AY086783 IPI:IPI00529285
PIR:B86410 RefSeq:NP_174159.1 UniGene:At.11834
ProteinModelPortal:Q9C5I3 SMR:Q9C5I3 STRING:Q9C5I3 PRIDE:Q9C5I3
EnsemblPlants:AT1G28370.1 GeneID:839733 KEGG:ath:AT1G28370
TAIR:At1g28370 eggNOG:NOG305458 InParanoid:Q9C5I3 OMA:RAIEFRG
PhylomeDB:Q9C5I3 ProtClustDB:CLSN2912737 Genevestigator:Q9C5I3
GermOnline:AT1G28370 Uniprot:Q9C5I3
Length = 166
Score = 112 (44.5 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 44 KFKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
+++GV + G + A+I R+WLGTF + ++AA AYD AI RG + NFP
Sbjct: 19 RYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFP 76
>TAIR|locus:2825842 [details] [associations]
symbol:RAP2.1 "related to AP2 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009873
GO:GO:0003677 GO:GO:0009409 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC083835 HOGENOM:HOG000237624 EMBL:BT024691
EMBL:AY086838 EMBL:Z27045 EMBL:AF003094 IPI:IPI00543804 PIR:H96511
RefSeq:NP_564496.1 UniGene:At.28676 ProteinModelPortal:Q8LC30
SMR:Q8LC30 PaxDb:Q8LC30 PRIDE:Q8LC30 EnsemblPlants:AT1G46768.1
GeneID:841117 KEGG:ath:AT1G46768 TAIR:At1g46768 eggNOG:NOG284485
InParanoid:Q8LC30 OMA:QEESTMR PhylomeDB:Q8LC30
ProtClustDB:CLSN2917164 Genevestigator:Q8LC30 Uniprot:Q8LC30
Length = 153
Score = 108 (43.1 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 26/90 (28%), Positives = 48/90 (53%)
Query: 38 HASAVSKFKGVVPQQNGHWGAQIYANHQR--IWLGTFKSEKDAAMAYDSAAIRLRGVDSH 95
H + ++G+ ++ G W A+I ++R +WLG++ ++ AA AYD A LRG +
Sbjct: 24 HVATRKPYRGIRRRKWGKWVAEIREPNKRSRLWLGSYTTDIAAARAYDVAVFYLRGPSAR 83
Query: 96 RNFPWTKITIEEPNFQSHYSTEAVINMIRD 125
NFP + EE + + + + +IR+
Sbjct: 84 LNFP-DLLLQEEDHLSAATTADMPAALIRE 112
>TAIR|locus:2074765 [details] [associations]
symbol:CEJ1 "cooperatively regulated by ethylene and
jasmonate 1" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009617 "response to bacterium"
evidence=IEP] [GO:0010941 "regulation of cell death" evidence=IMP]
[GO:0042742 "defense response to bacterium" evidence=IMP]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0009414 "response to water deprivation"
evidence=RCA] [GO:0009611 "response to wounding" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0042538 "hyperosmotic salinity response"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0010941 GO:GO:0009873
GO:GO:0003677 GO:GO:0009409 GO:GO:0042742 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200
HSSP:O80337 EMBL:AL132976 HOGENOM:HOG000237624
ProtClustDB:CLSN2914757 EMBL:AY045579 EMBL:AY093792 IPI:IPI00543652
PIR:T45572 RefSeq:NP_190595.1 UniGene:At.1423
ProteinModelPortal:Q9SNE1 SMR:Q9SNE1 STRING:Q9SNE1
EnsemblPlants:AT3G50260.1 GeneID:824188 KEGG:ath:AT3G50260
TAIR:At3g50260 eggNOG:NOG306351 InParanoid:Q9SNE1 OMA:PELLPCT
PhylomeDB:Q9SNE1 Genevestigator:Q9SNE1 Uniprot:Q9SNE1
Length = 153
Score = 108 (43.1 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 45 FKGVVPQQNGHWGAQIYANHQR--IWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
FKG+ ++ G W A+I ++R +WLG++ + + AA AYD+A LRG + NFP
Sbjct: 21 FKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLNFP 77
>TAIR|locus:2144296 [details] [associations]
symbol:TINY2 "AT5G11590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0009873
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AL163815 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624
EMBL:AY940160 EMBL:AY560851 IPI:IPI00526417 PIR:T48518
RefSeq:NP_196720.1 UniGene:At.50619 ProteinModelPortal:Q9LYD3
SMR:Q9LYD3 EnsemblPlants:AT5G11590.1 GeneID:831031
KEGG:ath:AT5G11590 TAIR:At5g11590 eggNOG:NOG295419
InParanoid:Q9LYD3 OMA:SSEDNYG PhylomeDB:Q9LYD3
ProtClustDB:CLSN2686631 Genevestigator:Q9LYD3 Uniprot:Q9LYD3
Length = 236
Score = 118 (46.6 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 37/107 (34%), Positives = 55/107 (51%)
Query: 1 MEEEMLSIISNGETNV-IPEL-SDSISSTPLIPA----TKRLRHASAVSKFKGVVPQQNG 54
M EE S+ S T + +P SDS+S TKR R + ++GV + G
Sbjct: 1 MAEEYYSLRSERVTQLLVPNSESDSVSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWG 60
Query: 55 HWGAQIYANHQ--RIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
W ++I + RIWLGTF + + AA A+D AA+ ++G + NFP
Sbjct: 61 KWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFP 107
>TAIR|locus:2183304 [details] [associations]
symbol:AT5G07310 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL163912 HOGENOM:HOG000057294
ProtClustDB:CLSN2686950 EMBL:AY560885 EMBL:DQ653268 EMBL:BT025717
IPI:IPI00548342 PIR:T49870 RefSeq:NP_196348.1 UniGene:At.50703
ProteinModelPortal:Q9LY29 SMR:Q9LY29 IntAct:Q9LY29 STRING:Q9LY29
EnsemblPlants:AT5G07310.1 GeneID:830622 KEGG:ath:AT5G07310
TAIR:At5g07310 eggNOG:NOG290249 InParanoid:Q9LY29 OMA:GNQSSSH
PhylomeDB:Q9LY29 ArrayExpress:Q9LY29 Genevestigator:Q9LY29
Uniprot:Q9LY29
Length = 263
Score = 119 (46.9 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 45 FKGVVPQQNGHWGAQIYANHQ--RIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
++GV + G W A+I + R+WLGTF++ + AA+AYD+AA++ +G + NFP
Sbjct: 92 YRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFP 148
>TAIR|locus:2062954 [details] [associations]
symbol:CRF5 "AT2G46310" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IGI] [GO:0042991 "transcription factor import into
nucleus" evidence=RCA;IDA] [GO:0048366 "leaf development"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
GO:GO:0009736 GO:GO:0048366 EMBL:AC005397 GO:GO:0048825
GO:GO:0042991 HOGENOM:HOG000237664 EMBL:AY074638 EMBL:BT003121
EMBL:AK227661 IPI:IPI00528508 PIR:C84901 RefSeq:NP_182154.1
UniGene:At.37025 ProteinModelPortal:O82339 SMR:O82339 IntAct:O82339
EnsemblPlants:AT2G46310.1 GeneID:819239 KEGG:ath:AT2G46310
TAIR:At2g46310 eggNOG:NOG253877 InParanoid:O82339 OMA:SHNDETE
PhylomeDB:O82339 ProtClustDB:CLSN2683458 Genevestigator:O82339
Uniprot:O82339
Length = 294
Score = 120 (47.3 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 41 AVSKFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNF 98
+V K++GV + G + A+I ++ R+WLGTF + ++AA+ YD AAIR++G ++ NF
Sbjct: 95 SVVKYRGVRQRPWGKFAAEIRDPSSRTRLWLGTFATAEEAAIGYDRAAIRIKGHNAQTNF 154
Query: 99 ------PWTKITIEEP 108
P T++ E P
Sbjct: 155 LTPPPSPTTEVLPETP 170
>TAIR|locus:2176095 [details] [associations]
symbol:ABR1 "ABA REPRESSOR1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0006970 "response to osmotic stress"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009749 "response to glucose stimulus"
evidence=IEP] [GO:0009788 "negative regulation of abscisic acid
mediated signaling pathway" evidence=IMP] [GO:0050832 "defense
response to fungus" evidence=IEP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0009737 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009738 GO:GO:0009873 GO:GO:0050832
GO:GO:0003677 GO:GO:0009749 GO:GO:0003700 GO:GO:0006351
GO:GO:0006970 Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB025637
EMBL:AY140092 EMBL:BT008480 IPI:IPI00536757 RefSeq:NP_201280.1
UniGene:At.27199 UniGene:At.71233 HSSP:O80337
ProteinModelPortal:Q9FGF8 SMR:Q9FGF8 STRING:Q9FGF8
EnsemblPlants:AT5G64750.1 GeneID:836596 KEGG:ath:AT5G64750
TAIR:At5g64750 eggNOG:NOG310508 HOGENOM:HOG000006008
InParanoid:Q9FGF8 OMA:SYSEMAR PhylomeDB:Q9FGF8
ProtClustDB:CLSN2914923 Genevestigator:Q9FGF8 GO:GO:0009788
Uniprot:Q9FGF8
Length = 391
Score = 122 (48.0 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 36/103 (34%), Positives = 50/103 (48%)
Query: 10 SNGE-TNVIPELSDSISST-PLIPATKRLRHASAVSKFKGVVPQQN---------GHWGA 58
S G T+ + E S ++S P T +S S F G P++ G W A
Sbjct: 139 SGGSSTSKVREASSNMSGPGPTYEYTTTATASSETSSFSGDQPRRRYRGVRQRPWGKWAA 198
Query: 59 QIYANHQ--RIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
+I + R+WLGTF + + AA AYD AA+R RG + NFP
Sbjct: 199 EIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFP 241
>TAIR|locus:2202200 [details] [associations]
symbol:AT1G19210 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC069143 HOGENOM:HOG000237624 EMBL:AF332422
EMBL:BT006191 IPI:IPI00523703 PIR:F86325 RefSeq:NP_173355.3
UniGene:At.17044 ProteinModelPortal:Q84QC2 SMR:Q84QC2
EnsemblPlants:AT1G19210.1 GeneID:838504 KEGG:ath:AT1G19210
TAIR:At1g19210 eggNOG:NOG276412 InParanoid:Q84QC2 OMA:YEIRQES
PhylomeDB:Q84QC2 ProtClustDB:CLSN2918479 Genevestigator:Q84QC2
Uniprot:Q84QC2
Length = 185
Score = 114 (45.2 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 25/63 (39%), Positives = 41/63 (65%)
Query: 39 ASAVSKFKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHR 96
+S SK+KGV ++ G W ++I + +RIWLG++ + + AA A+D+A LRG ++
Sbjct: 6 SSMQSKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTPEKAARAFDAALYCLRGNNAKF 65
Query: 97 NFP 99
NFP
Sbjct: 66 NFP 68
>TAIR|locus:2032510 [details] [associations]
symbol:ERF12 "ERF domain protein 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009873 "ethylene mediated signaling pathway"
evidence=TAS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006952 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HOGENOM:HOG000237624 EMBL:AC010155 EMBL:AB055883
EMBL:AY099798 EMBL:BT002604 IPI:IPI00525007 RefSeq:NP_174158.1
UniGene:At.40906 ProteinModelPortal:Q94ID6 SMR:Q94ID6 IntAct:Q94ID6
STRING:Q94ID6 EnsemblPlants:AT1G28360.1 GeneID:839732
KEGG:ath:AT1G28360 TAIR:At1g28360 eggNOG:NOG295943
InParanoid:Q94ID6 OMA:CAREVHY PhylomeDB:Q94ID6
ProtClustDB:CLSN2679392 Genevestigator:Q94ID6 GermOnline:AT1G28360
Uniprot:Q94ID6
Length = 189
Score = 114 (45.2 bits), Expect = 0.00010, P = 0.00010
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 45 FKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
++GV + G + A+I R+WLGTF + ++AA+AYD AA LRG+ + NFP
Sbjct: 12 YRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNFP 68
>TAIR|locus:2014185 [details] [associations]
symbol:AT1G64380 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=IEP]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200 HSSP:O80337
EMBL:AY560876 EMBL:AC066689 EMBL:AK228763 IPI:IPI00537541
PIR:H96667 RefSeq:NP_176620.1 UniGene:At.36008 UniGene:At.67835
ProteinModelPortal:Q9C7W2 SMR:Q9C7W2 EnsemblPlants:AT1G64380.1
GeneID:842745 KEGG:ath:AT1G64380 TAIR:At1g64380 eggNOG:NOG272521
HOGENOM:HOG000241606 InParanoid:Q9C7W2 OMA:CPLERMP PhylomeDB:Q9C7W2
ProtClustDB:CLSN2679299 Genevestigator:Q9C7W2 Uniprot:Q9C7W2
Length = 335
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 36/102 (35%), Positives = 49/102 (48%)
Query: 45 FKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPWTK 102
++GV + G W A+I N R+WLGT+ + + AA AYD AA +LRG + NFP K
Sbjct: 136 YRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNFPNLK 195
Query: 103 ITIEEPNFQSHYSTEAVINMIRDGSYSSR-QLFQKELTPSDV 143
E A+ N + DG S Q +KE V
Sbjct: 196 DPSELLGLGDSSKLIALKNAV-DGKIQSICQRVRKERAKKSV 236
>TAIR|locus:2126460 [details] [associations]
symbol:ARF16 "auxin response factor 16" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0048829 "root cap development"
evidence=IGI;IMP] [GO:0051301 "cell division" evidence=IGI]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0051301 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL161576 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0035198 GO:GO:0007389
HOGENOM:HOG000241141 eggNOG:NOG315592 EMBL:AL078464 EMBL:AY059792
EMBL:AY091198 EMBL:EU550120 EMBL:EU550121 EMBL:EU550122
EMBL:EU550123 EMBL:EU550124 EMBL:EU550125 EMBL:EU550126
EMBL:EU550127 EMBL:EU550128 EMBL:EU550129 EMBL:EU550130
EMBL:EU550131 EMBL:EU550132 EMBL:EU550133 EMBL:EU550134
EMBL:EU550135 EMBL:EU550136 EMBL:EU550137 EMBL:EU550138
EMBL:EU550139 EMBL:EU550140 EMBL:EU550141 EMBL:EU550142
EMBL:EU550143 IPI:IPI00528149 PIR:T08984 RefSeq:NP_567841.1
UniGene:At.3365 ProteinModelPortal:Q93YR9 SMR:Q93YR9 IntAct:Q93YR9
STRING:Q93YR9 EnsemblPlants:AT4G30080.1 GeneID:829131
KEGG:ath:AT4G30080 GeneFarm:3406 TAIR:At4g30080 InParanoid:Q93YR9
OMA:GHAENAY PhylomeDB:Q93YR9 ProtClustDB:CLSN2917636
Genevestigator:Q93YR9 GermOnline:AT4G30080 Uniprot:Q93YR9
Length = 670
Score = 129 (50.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 33/107 (30%), Positives = 49/107 (45%)
Query: 134 FQKELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQLVFHDKSMKLWKF 193
F K LT SD +P+ A FP++ E + A DV H +WKF
Sbjct: 120 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDV----HGD---VWKF 172
Query: 194 RYCYWKSSQSFVFTRGWNRFVKENQLKANDTICFYLCELRDIAKGTK 240
R+ Y + + + T GW+ FV + +L A D+I F E D+ G +
Sbjct: 173 RHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIR 219
Score = 37 (18.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 283 VEEDDNGNEIEATEEVELKAPSSTSDSERKLFKLFGVE 320
+E DD G ++ L S + RKL +FG++
Sbjct: 591 MESDDVGRTLD------LSVLGSYEELSRKLSDMFGIK 622
>UNIPROTKB|Q5MFV1 [details] [associations]
symbol:BIERF3 "BTH-induced ERF transcriptional factor 3"
species:39946 "Oryza sativa Indica Group" [GO:0009620 "response to
fungus" evidence=IC] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009620 EMBL:AY831394
ProteinModelPortal:Q5MFV1 KEGG:dosa:Os02t0654700-01 Gramene:Q5MFV1
Uniprot:Q5MFV1
Length = 303
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 39 ASAVSKFKGVVPQQNGHWGAQIY---ANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSH 95
AS ++GV + G + A+I N R+WLGTF S ++AA+AYD AA R+RG +
Sbjct: 143 ASRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFDSAEEAAVAYDRAAYRMRGSRAL 202
Query: 96 RNFP 99
NFP
Sbjct: 203 LNFP 206
>TAIR|locus:2092339 [details] [associations]
symbol:ERF7 "ethylene response factor 7" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0009873 "ethylene mediated
signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0009737 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045892 GO:GO:0006952 GO:GO:0009873
GO:GO:0009414 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB024036
HOGENOM:HOG000237624 ProtClustDB:CLSN2682907 EMBL:AB032201
EMBL:AY037254 EMBL:AY094001 EMBL:AY085023 EMBL:AK228460
IPI:IPI00537654 RefSeq:NP_188666.1 UniGene:At.20161
ProteinModelPortal:Q9LDE4 SMR:Q9LDE4 IntAct:Q9LDE4 STRING:Q9LDE4
PaxDb:Q9LDE4 PRIDE:Q9LDE4 EnsemblPlants:AT3G20310.1 GeneID:821575
KEGG:ath:AT3G20310 TAIR:At3g20310 eggNOG:NOG322216
InParanoid:Q9LDE4 OMA:VAPEDCH PhylomeDB:Q9LDE4
Genevestigator:Q9LDE4 GermOnline:AT3G20310 Uniprot:Q9LDE4
Length = 244
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 44 KFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
+++GV + G + A+I R+WLGTF S DAA AYD+AA LRG + NFP
Sbjct: 26 RYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNFP 83
>TAIR|locus:2167659 [details] [associations]
symbol:ERF9 "erf domain protein 9" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0016020 "membrane" evidence=IDA]
[GO:0006857 "oligopeptide transport" evidence=RCA] [GO:0009873
"ethylene mediated signaling pathway" evidence=TAS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006952 GO:GO:0009873 GO:GO:0016020
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB005239 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HOGENOM:HOG000237624
EMBL:AB047648 EMBL:AY560856 EMBL:BT015876 EMBL:BT020188
IPI:IPI00535860 RefSeq:NP_199234.1 UniGene:At.30087
ProteinModelPortal:Q9FE67 SMR:Q9FE67 IntAct:Q9FE67 STRING:Q9FE67
EnsemblPlants:AT5G44210.1 GeneID:834444 KEGG:ath:AT5G44210
TAIR:At5g44210 eggNOG:NOG249494 InParanoid:Q9FE67 OMA:FACHRER
PhylomeDB:Q9FE67 ProtClustDB:CLSN2916712 Genevestigator:Q9FE67
GermOnline:AT5G44210 Uniprot:Q9FE67
Length = 200
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 30/94 (31%), Positives = 45/94 (47%)
Query: 45 FKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPWT- 101
F+GV + G + A+I R+WLGTF + ++AA AYD+AA RG + NFP
Sbjct: 33 FRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFPLPG 92
Query: 102 -KITIEEPNFQSHYSTEAVINMIRDGSYSSRQLF 134
T+ + Y + R+ +RQ F
Sbjct: 93 ESTTVNDGGENDSYVNRTTVTTARE---MTRQRF 123
>TAIR|locus:2035454 [details] [associations]
symbol:MP "MONOPTEROS" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IEP]
[GO:0009725 "response to hormone stimulus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0016020 "membrane" evidence=IDA] [GO:0009790 "embryo
development" evidence=IGI] [GO:0009908 "flower development"
evidence=IGI] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IGI] [GO:0048364 "root development" evidence=IGI]
[GO:0048507 "meristem development" evidence=IGI;RCA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=IMP;RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0009942 "longitudinal axis specification"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0016020 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908 GO:GO:0048507
EMBL:AC007797 KO:K14486 EMBL:AF037228 EMBL:AF037229 EMBL:AF334716
EMBL:BT002050 EMBL:BT008805 EMBL:AB199792 EMBL:U79557 EMBL:EF598523
EMBL:EF598524 EMBL:EF598525 EMBL:EF598526 EMBL:EF598527
EMBL:EF598528 EMBL:EF598529 EMBL:EF598530 EMBL:EF598531
EMBL:EF598532 EMBL:EF598533 EMBL:EF598534 EMBL:EF598535
EMBL:EF598536 EMBL:EF598537 EMBL:EF598538 EMBL:EF598539
EMBL:EF598540 EMBL:EF598541 EMBL:EF598542 EMBL:EF598543
EMBL:EF598544 EMBL:EF598545 EMBL:EF598546 IPI:IPI00538603
PIR:G86331 PIR:T51807 RefSeq:NP_173414.1 UniGene:At.10494
UniGene:At.41731 ProteinModelPortal:P93024 SMR:P93024 IntAct:P93024
STRING:P93024 PaxDb:P93024 PRIDE:P93024 EnsemblPlants:AT1G19850.1
GeneID:838573 KEGG:ath:AT1G19850 GeneFarm:3368 TAIR:At1g19850
eggNOG:NOG291711 InParanoid:P93024 OMA:ARYNKAT PhylomeDB:P93024
ProtClustDB:CLSN2682929 Genevestigator:P93024 GermOnline:AT1G19850
GO:GO:0010305 GO:GO:0009942 Uniprot:P93024
Length = 902
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 33/119 (27%), Positives = 52/119 (43%)
Query: 122 MIRDGSYSSRQLFQKELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQL 181
M+R GS + F K LT SD +P++ A K FP + + + +L
Sbjct: 147 MLR-GSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQ-------EL 198
Query: 182 VFHDKSMKLWKFRYCYWKSSQSFVFTRGWNRFVKENQLKANDTICFYLCELRDIAKGTK 240
V D W FR+ Y + + T GW+ FV +L+A D++ F E + G +
Sbjct: 199 VVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVR 257
>TAIR|locus:2146985 [details] [associations]
symbol:ESE3 "ethylene and salt inducible 3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009740 "gibberellic acid
mediated signaling pathway" evidence=RCA] [GO:0010162 "seed
dormancy process" evidence=RCA] [GO:0009873 "ethylene mediated
signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AC006259
HOGENOM:HOG000237624 EMBL:AY045659 EMBL:AY059664 IPI:IPI00523095
RefSeq:NP_197901.1 UniGene:At.26169 ProteinModelPortal:Q94AW5
SMR:Q94AW5 EnsemblPlants:AT5G25190.1 GeneID:832590
KEGG:ath:AT5G25190 TAIR:At5g25190 eggNOG:NOG283264
InParanoid:Q94AW5 OMA:IMCGPRA PhylomeDB:Q94AW5
ProtClustDB:CLSN2686531 Genevestigator:Q94AW5 Uniprot:Q94AW5
Length = 181
Score = 112 (44.5 bits), Expect = 0.00015, P = 0.00015
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 44 KFKGVVPQQNGHWGAQIYAN--HQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPW 100
+F+GV + G W ++I RIWLGTF++ +DAA AYD AA + G + NFP+
Sbjct: 7 RFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
>UNIPROTKB|Q5MFV3 [details] [associations]
symbol:BIERF1 "BTH-induced ERF transcriptional factor 1"
species:39946 "Oryza sativa Indica Group" [GO:0009620 "response to
fungus" evidence=IEP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009620 EMBL:AY831392
ProteinModelPortal:Q5MFV3 SMR:Q5MFV3 Gramene:Q5MFV3 Uniprot:Q5MFV3
Length = 399
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 27/87 (31%), Positives = 48/87 (55%)
Query: 18 PELSDSISSTPLIP---ATKRLRHASAVSKFKGVVPQQNGHWGAQIY--ANHQRIWLGTF 72
P +D + +T L+ T R ++++G+ + G W A+I + R+WLGT+
Sbjct: 109 PPTADGMLTTKLVQHDGPTARSAKRKRKNQYRGIRQRPWGKWAAEIRDPSKGVRVWLGTY 168
Query: 73 KSEKDAAMAYDSAAIRLRGVDSHRNFP 99
+ ++AA AYD+ A ++RG + NFP
Sbjct: 169 NTAEEAARAYDAEARKIRGKKAKVNFP 195
>TAIR|locus:2155598 [details] [associations]
symbol:TOE3 "target of early activation tagged (EAT) 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009408
"response to heat" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB020742
HOGENOM:HOG000033977 KO:K09284 EMBL:AK176145 EMBL:BT029206
EMBL:AY088238 IPI:IPI00536061 RefSeq:NP_201519.1 UniGene:At.28821
UniGene:At.28822 ProteinModelPortal:Q9FH95 SMR:Q9FH95 PRIDE:Q9FH95
EnsemblPlants:AT5G67180.1 GeneID:836853 KEGG:ath:AT5G67180
TAIR:At5g67180 eggNOG:NOG326403 InParanoid:Q9FH95 OMA:PDHHEES
PhylomeDB:Q9FH95 ProtClustDB:CLSN2916545 Genevestigator:Q9FH95
Uniprot:Q9FH95
Length = 352
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 43 SKFKGVVPQQNGHWGAQI--YANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPW 100
SK++GV + G W +++ + N + ++LG F +E +AA AYD AAI+ G D+ NF
Sbjct: 187 SKYRGVTLHKCGRWESRLGQFLNKKYVYLGLFDTEIEAARAYDKAAIKCNGKDAVTNFD- 245
Query: 101 TKITIEEPNFQS 112
K+ EE + S
Sbjct: 246 PKVYEEEEDLSS 257
Score = 114 (45.2 bits), Expect = 0.00060, P = 0.00060
Identities = 27/71 (38%), Positives = 42/71 (59%)
Query: 31 PATKRLRHA--SAVSKFKGVV-PQQNGHWGAQIYANHQRIWLGTFKSEKDAAMAYDSAAI 87
P K+ R S S+++GV ++ G W + I+ ++++LG F + AA AYD AAI
Sbjct: 81 PPIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAI 140
Query: 88 RLRGVDSHRNF 98
+ RGVD+ NF
Sbjct: 141 KFRGVDADINF 151
>UNIPROTKB|P37398 [details] [associations]
symbol:VP1 "B3 domain-containing protein VP1" species:39947
"Oryza sativa Japonica Group" [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP] [GO:0009790 "embryo development"
evidence=IEP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0009737 GO:GO:0005634 GO:GO:0009738
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 eggNOG:NOG318581
OMA:VWNMRYR ProtClustDB:CLSN2684517 GO:GO:0009790
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AP008207 EMBL:D16640 EMBL:AP003436 EMBL:AK073805 EMBL:AK105441
RefSeq:NP_001045162.2 UniGene:Os.7360 ProteinModelPortal:P37398
STRING:P37398 PRIDE:P37398 EnsemblPlants:LOC_Os01g68370.1
GeneID:4324314 KEGG:osa:4324314 Gramene:P37398 HOGENOM:HOG000238595
Uniprot:P37398
Length = 727
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 38/130 (29%), Positives = 65/130 (50%)
Query: 131 RQLFQKELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQLVFHD-KSMK 189
R L QK L SDVG L R+V+PK+ V + P++ R D V + D + +
Sbjct: 534 RFLLQKVLKQSDVGSLGRIVLPKEAEV-HLPELKTR----------DGVSIPMEDIGTSQ 582
Query: 190 LWKFRYCYWKSSQSFVFT-RGWNRFVKENQLKANDTICFYLCELRD---IAKGTKTFGMI 245
+W RY +W +++S ++ FV+ N+L+ D I Y +++ + +G K
Sbjct: 583 VWNMRYRFWPNNKSRMYLLENTGDFVRSNELQEGDFIVIY-SDIKSGKYLIRGVKVRRAA 641
Query: 246 DAKKGENSGA 255
++G +SGA
Sbjct: 642 Q-EQGNSSGA 650
>TAIR|locus:2009298 [details] [associations]
symbol:ARF21 "auxin response factor 21" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC023279 EMBL:AC023913 IPI:IPI00539451
PIR:E86468 RefSeq:NP_174701.2 UniGene:At.51930
ProteinModelPortal:Q9C8N9 SMR:Q9C8N9 EnsemblPlants:AT1G34410.1
GeneID:840344 KEGG:ath:AT1G34410 GeneFarm:3425 TAIR:At1g34410
PhylomeDB:Q9C8N9 Genevestigator:Q9C8N9 GermOnline:AT1G34410
Uniprot:Q9C8N9
Length = 606
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 32/107 (29%), Positives = 47/107 (43%)
Query: 134 FQKELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQLVFHDKSMKLWKF 193
F K LT SD +PKK+A++ P + A+ A D+ HD W+F
Sbjct: 126 FTKVLTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDL----HDNQ---WRF 178
Query: 194 RYCYWKSSQSFVFTRGWNRFVKENQLKANDTICFYLCELRDIAKGTK 240
R+ Y + Q T GWN F+ +L D I F E ++ G +
Sbjct: 179 RHNYRGTPQRHSLTTGWNEFITSKKLVKGDVIVFVRGETGELRVGIR 225
>TAIR|locus:2200477 [details] [associations]
symbol:ADAP "ARIA-interacting double AP2 domain protein"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IMP] [GO:0009737
"response to abscisic acid stimulus" evidence=IMP] [GO:0010187
"negative regulation of seed germination" evidence=IMP] [GO:0040008
"regulation of growth" evidence=IMP] [GO:0000981 "sequence-specific
DNA binding RNA polymerase II transcription factor activity"
evidence=IPI] [GO:0045723 "positive regulation of fatty acid
biosynthetic process" evidence=IGI;IMP] [GO:1901959 "positive
regulation of cutin biosynthetic process" evidence=IGI] [GO:0009887
"organ morphogenesis" evidence=ISS] [GO:0003677 "DNA binding"
evidence=TAS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010187
GO:GO:0040008 KO:K09285 EMBL:AC010924 EMBL:AY045915 EMBL:AY133880
IPI:IPI00524024 IPI:IPI00535618 PIR:D86295 RefSeq:NP_563990.1
RefSeq:NP_973839.1 UniGene:At.11854 ProteinModelPortal:Q94AN4
SMR:Q94AN4 IntAct:Q94AN4 PRIDE:Q94AN4 EnsemblPlants:AT1G16060.1
GeneID:838176 KEGG:ath:AT1G16060 TAIR:At1g16060 eggNOG:NOG326907
HOGENOM:HOG000238389 InParanoid:Q94AN4 OMA:MESQSKE PhylomeDB:Q94AN4
ProtClustDB:CLSN2917011 Genevestigator:Q94AN4 Uniprot:Q94AN4
Length = 345
Score = 118 (46.6 bits), Expect = 0.00021, P = 0.00021
Identities = 26/61 (42%), Positives = 42/61 (68%)
Query: 42 VSKFKGVVPQQ-NGHWGAQI---YANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRN 97
VSK++GV NG W A+I + N + ++LGT+ ++++AA+AYD AAI RG+++ N
Sbjct: 158 VSKYRGVAKHHHNGRWEARIGRVFGN-KYLYLGTYATQEEAAIAYDIAAIEYRGLNAVTN 216
Query: 98 F 98
F
Sbjct: 217 F 217
>TAIR|locus:2012653 [details] [associations]
symbol:AT1G33760 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624 EMBL:AY560838
EMBL:AC010164 EMBL:BT015928 EMBL:BT020566 IPI:IPI00520537
PIR:A86461 RefSeq:NP_174636.1 UniGene:At.39878
ProteinModelPortal:Q9LQ28 SMR:Q9LQ28 EnsemblPlants:AT1G33760.1
GeneID:840267 KEGG:ath:AT1G33760 TAIR:At1g33760 eggNOG:NOG312231
InParanoid:Q9LQ28 OMA:FPRPESS PhylomeDB:Q9LQ28
ProtClustDB:CLSN2914626 Genevestigator:Q9LQ28 Uniprot:Q9LQ28
Length = 184
Score = 111 (44.1 bits), Expect = 0.00022, P = 0.00022
Identities = 25/76 (32%), Positives = 43/76 (56%)
Query: 45 FKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPWTK 102
++G+ ++ G W ++I RIWLG++++ + AA AYD+AA+ LRG ++ NFP
Sbjct: 20 YRGIRRRKWGKWVSEIREPGKKTRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPELV 79
Query: 103 ITIEEPNFQSHYSTEA 118
+ P S +A
Sbjct: 80 DSFPRPESSSSEHIQA 95
>TAIR|locus:2017829 [details] [associations]
symbol:WRI4 "WRINKLED 4" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IC] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0000981 "sequence-specific DNA binding
RNA polymerase II transcription factor activity" evidence=IPI]
[GO:0045723 "positive regulation of fatty acid biosynthetic
process" evidence=IGI;IMP] [GO:1901959 "positive regulation of
cutin biosynthetic process" evidence=IGI] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0009887 "organ morphogenesis" evidence=ISS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 KO:K09285 HOGENOM:HOG000238389 EMBL:AC010793
UniGene:At.21701 UniGene:At.48398 IPI:IPI00846298
RefSeq:NP_001077849.1 ProteinModelPortal:A8MQS2 SMR:A8MQS2
STRING:A8MQS2 EnsemblPlants:AT1G79700.2 GeneID:844309
KEGG:ath:AT1G79700 OMA:GKLATEE ProtClustDB:CLSN2680813
Genevestigator:A8MQS2 Uniprot:A8MQS2
Length = 313
Score = 117 (46.2 bits), Expect = 0.00022, P = 0.00022
Identities = 26/61 (42%), Positives = 42/61 (68%)
Query: 42 VSKFKGVVPQQ-NGHWGAQI---YANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRN 97
VSK++GV NG W A+I + N + ++LGT+ ++++AA+AYD AAI RG+++ N
Sbjct: 152 VSKYRGVARHHHNGRWEARIGRVFGN-KYLYLGTYATQEEAAIAYDIAAIEYRGLNAVTN 210
Query: 98 F 98
F
Sbjct: 211 F 211
>TAIR|locus:2194819 [details] [associations]
symbol:AT1G44830 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:1900030 "regulation of pectin biosynthetic
process" evidence=IMP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624
ProtClustDB:CLSN2714459 EMBL:AY560839 EMBL:AC020576 EMBL:BT025270
EMBL:AK175503 IPI:IPI00520360 PIR:D96507 RefSeq:NP_175104.1
UniGene:At.50652 ProteinModelPortal:Q9LPE8 SMR:Q9LPE8
EnsemblPlants:AT1G44830.1 GeneID:841047 KEGG:ath:AT1G44830
TAIR:At1g44830 eggNOG:NOG243601 InParanoid:Q9LPE8 OMA:LSESSSW
PhylomeDB:Q9LPE8 Genevestigator:Q9LPE8 GO:GO:1900030 Uniprot:Q9LPE8
Length = 211
Score = 113 (44.8 bits), Expect = 0.00022, P = 0.00022
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 42 VSKFKGVVPQQNGHWGAQIYANHQ--RIWLGTFKSEKDAAMAYDSAAIRLRGVDSHR-NF 98
+ K+KGV + G W ++I A +Q RIWLG++ + + AA AYD+A + L+G ++ NF
Sbjct: 32 MKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANNLNF 91
Query: 99 P 99
P
Sbjct: 92 P 92
>UNIPROTKB|Q84ZA1 [details] [associations]
symbol:DREB2C "Dehydration-responsive element-binding
protein 2C" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0006950 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
EMBL:AP008214 EMBL:AY339375 EMBL:AP004623 EMBL:AP005411
EMBL:AK108143 RefSeq:NP_001062535.1 UniGene:Os.30907
ProteinModelPortal:Q84ZA1 GeneID:4346351 KEGG:dosa:Os08t0565200-01
KEGG:osa:4346351 Gramene:Q84ZA1 eggNOG:NOG242446 Uniprot:Q84ZA1
Length = 230
Score = 114 (45.2 bits), Expect = 0.00023, P = 0.00023
Identities = 34/97 (35%), Positives = 47/97 (48%)
Query: 45 FKGVVPQQNGHWGAQIYANHQ--RIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPWTK 102
F+GV + G W A+I ++ R+WLGTF + DAA AYDSAA L G + N
Sbjct: 55 FRGVRQRTWGKWVAEIREPNRGARLWLGTFNTALDAARAYDSAARALYGDCARLNLLLAA 114
Query: 103 ITIEEPNFQSHYSTEAVINMIRDGSYSSRQLFQKELT 139
T P + S + D + SS Q++LT
Sbjct: 115 ATAGAPPAAATPSVATPCSTNDDSNNSSSTTHQQQLT 151
>TAIR|locus:2090975 [details] [associations]
symbol:RAP2.2 "related to AP2 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0001666 "response to hypoxia"
evidence=IMP] [GO:0010468 "regulation of gene expression"
evidence=IEP] [GO:0006487 "protein N-linked glycosylation"
evidence=RCA] [GO:0046685 "response to arsenic-containing
substance" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0001666 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AB022220
HOGENOM:HOG000237624 ProtClustDB:CLSN2682146 EMBL:AY054539
EMBL:BT000374 EMBL:AY085580 EMBL:AF003095 IPI:IPI00519633
IPI:IPI00544839 RefSeq:NP_566482.1 RefSeq:NP_850582.1
UniGene:At.25146 ProteinModelPortal:Q9LUM4 SMR:Q9LUM4 STRING:Q9LUM4
EnsemblPlants:AT3G14230.1 GeneID:820643 KEGG:ath:AT3G14230
TAIR:At3g14230 eggNOG:NOG250271 InParanoid:Q9LUM4 OMA:SAFDCED
PhylomeDB:Q9LUM4 Genevestigator:Q9LUM4 Uniprot:Q9LUM4
Length = 379
Score = 118 (46.6 bits), Expect = 0.00025, P = 0.00025
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 43 SKFKGVVPQQNGHWGAQIYANHQ--RIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPW 100
++++G+ + G W A+I + R WLGTF + ++AA AYD+AA R+RG + NFP
Sbjct: 126 NQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPE 185
Query: 101 TK 102
K
Sbjct: 186 EK 187
>TAIR|locus:2116224 [details] [associations]
symbol:RRTF1 "redox responsive transcription factor 1"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0050832 "defense
response to fungus" evidence=IEP] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] [GO:0035556 "intracellular
signal transduction" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009873 GO:GO:0050832 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200
HSSP:O80337 EMBL:AL035521 EMBL:AL161585 EMBL:AY064151 EMBL:AY120700
EMBL:AF325091 IPI:IPI00529364 PIR:T04787 RefSeq:NP_195167.1
UniGene:At.48936 UniGene:At.66607 ProteinModelPortal:Q9SZ06
SMR:Q9SZ06 STRING:Q9SZ06 EnsemblPlants:AT4G34410.1 GeneID:829591
KEGG:ath:AT4G34410 TAIR:At4g34410 eggNOG:NOG290278
HOGENOM:HOG000243182 InParanoid:Q9SZ06 OMA:GNTIADM PhylomeDB:Q9SZ06
ProtClustDB:CLSN2718216 Genevestigator:Q9SZ06 Uniprot:Q9SZ06
Length = 268
Score = 115 (45.5 bits), Expect = 0.00027, P = 0.00027
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 45 FKGVVPQQNGHWGAQIYANHQ--RIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPWTK 102
++GV + G + A+I + R+WLGTF++ +DAA AYD AAI RG + NFP+
Sbjct: 136 YRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFPFVD 195
Query: 103 IT 104
T
Sbjct: 196 YT 197
>TAIR|locus:2008216 [details] [associations]
symbol:PLT2 "PLETHORA 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0007389 "pattern specification process"
evidence=IMP] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0048364 "root development" evidence=IGI;IMP] [GO:0051302
"regulation of cell division" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009734 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0048364 Gene3D:3.30.730.10 SUPFAM:SSF54171
HOGENOM:HOG000239258 KO:K09285 GO:GO:0007389 GO:GO:0019827
eggNOG:NOG311645 GO:GO:0051302 EMBL:AC006085
ProtClustDB:CLSN2680750 EMBL:AY506550 EMBL:AY585681 EMBL:BT020277
EMBL:BT020460 IPI:IPI00543980 PIR:F96549 RefSeq:NP_175530.2
UniGene:At.49968 ProteinModelPortal:Q5YGP7 SMR:Q5YGP7 IntAct:Q5YGP7
STRING:Q5YGP7 EnsemblPlants:AT1G51190.1 GeneID:841542
KEGG:ath:AT1G51190 TAIR:At1g51190 InParanoid:Q5YGP7 OMA:CASNAPN
PhylomeDB:Q5YGP7 Genevestigator:Q5YGP7 Uniprot:Q5YGP7
Length = 568
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 26/59 (44%), Positives = 41/59 (69%)
Query: 43 SKFKGVVPQ-QNGHWGAQI--YANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNF 98
S ++GV Q+G W A+I A ++ ++LGTF +E++AA AYD AAI+ RG+++ NF
Sbjct: 291 SMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNF 349
>TAIR|locus:2024076 [details] [associations]
symbol:DRNL "DORNROSCHEN-like" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS;IMP] [GO:0051726 "regulation of cell cycle"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0009880
"embryonic pattern specification" evidence=IMP] [GO:0048825
"cotyledon development" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009733 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0051726
HSSP:O80337 GO:GO:0009736 EMBL:AC000103 GO:GO:0009880 GO:GO:0048825
eggNOG:NOG305471 EMBL:AY560889 EMBL:BT026073 IPI:IPI00520168
RefSeq:NP_173864.1 UniGene:At.64842 ProteinModelPortal:Q9FYK5
SMR:Q9FYK5 IntAct:Q9FYK5 STRING:Q9FYK5 EnsemblPlants:AT1G24590.1
GeneID:839073 KEGG:ath:AT1G24590 TAIR:At1g24590
HOGENOM:HOG000112400 InParanoid:Q9FYK5 OMA:NDVVHES PhylomeDB:Q9FYK5
ProtClustDB:CLSN2914184 Genevestigator:Q9FYK5 GO:GO:0009740
Uniprot:Q9FYK5
Length = 306
Score = 116 (45.9 bits), Expect = 0.00027, P = 0.00027
Identities = 35/118 (29%), Positives = 62/118 (52%)
Query: 39 ASAVS--KFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDS 94
AS VS +++GV + G + A+I + +R WLGTF + ++AA AYD AA +RG+ +
Sbjct: 50 ASGVSTIRYRGVRRRPWGRYAAEIRDPLSKERRWLGTFDTAEEAACAYDCAARAMRGLKA 109
Query: 95 HRNFPWTKITIEEPNFQSHYSTEAVINMIRD--GSYSSRQLFQKELTPSDVGKLNRLV 150
NF + +++ + + S + ++RD S S L P ++ +N +V
Sbjct: 110 RTNFVYPMPSLDSYHHRIFSSPPMNMFLLRDVLNSQSLSPLTTFAYPPCNLSNVNDVV 167
>TAIR|locus:2091891 [details] [associations]
symbol:PLT1 "PLETHORA 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0007389 "pattern specification process"
evidence=IMP] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0048364 "root development" evidence=IGI;IMP] [GO:0051302
"regulation of cell division" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006950 GO:GO:0009734 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048364 Gene3D:3.30.730.10
SUPFAM:SSF54171 HOGENOM:HOG000239258 GO:GO:0007389 GO:GO:0019827
GO:GO:0051302 EMBL:AB025629 EMBL:AY506549 EMBL:AY585682
IPI:IPI00534725 RefSeq:NP_188720.2 UniGene:At.38171
ProteinModelPortal:Q5YGP8 SMR:Q5YGP8 EnsemblPlants:AT3G20840.1
GeneID:821632 KEGG:ath:AT3G20840 TAIR:At3g20840 eggNOG:NOG263958
InParanoid:Q5YGP8 OMA:NSSYHEL PhylomeDB:Q5YGP8
ProtClustDB:CLSN2680750 Genevestigator:Q5YGP8 Uniprot:Q5YGP8
Length = 574
Score = 120 (47.3 bits), Expect = 0.00028, P = 0.00028
Identities = 26/59 (44%), Positives = 41/59 (69%)
Query: 43 SKFKGVVPQ-QNGHWGAQI--YANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNF 98
S ++GV Q+G W A+I A ++ ++LGTF +E++AA AYD AAI+ RG+++ NF
Sbjct: 282 SMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNF 340
>TAIR|locus:2088439 [details] [associations]
symbol:FUS3 "FUSCA 3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009793 "embryo development ending
in seed dormancy" evidence=IGI;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IDA] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0010116 "positive regulation of abscisic acid
biosynthetic process" evidence=IMP] [GO:0010373 "negative
regulation of gibberellin biosynthetic process" evidence=IMP]
[GO:0010262 "somatic embryogenesis" evidence=IMP]
InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863 SMART:SM01019
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0003677 GO:GO:0008284 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
EMBL:AB016889 GO:GO:0010262 GO:GO:0010116 EMBL:AF016264
EMBL:AF016265 EMBL:AJ630497 EMBL:AY568669 IPI:IPI00540441
RefSeq:NP_566799.1 UniGene:At.6029 UniGene:At.66989 HSSP:Q9ZWM9
ProteinModelPortal:Q9LW31 SMR:Q9LW31 STRING:Q9LW31
EnsemblPlants:AT3G26790.1 GeneID:822293 KEGG:ath:AT3G26790
TAIR:At3g26790 eggNOG:NOG309510 HOGENOM:HOG000112670
InParanoid:O82411 OMA:GDFVNAH PhylomeDB:Q9LW31
ProtClustDB:CLSN2713723 Genevestigator:Q9LW31 GO:GO:0010373
Uniprot:Q9LW31
Length = 313
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 32/99 (32%), Positives = 47/99 (47%)
Query: 131 RQLFQKELTPSDVGKLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQLVFHDKSMKL 190
R LFQKEL SDV L R+++PKK A + P + + + D FH +
Sbjct: 89 RFLFQKELKNSDVSSLRRMILPKKAAEAHLPALECKEGIPIRMEDLDG----FH-----V 139
Query: 191 WKFRYCYWKSSQSFVFT-RGWNRFVKENQLKANDTICFY 228
W F+Y YW ++ S ++ FV + L+ D I Y
Sbjct: 140 WTFKYRYWPNNNSRMYVLENTGDFVNAHGLQLGDFIMVY 178
>TAIR|locus:2115005 [details] [associations]
symbol:RAP2.10 "related to AP2 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:Z99707 EMBL:AL161590
HOGENOM:HOG000237624 ProtClustDB:CLSN2683886 EMBL:AF003103
EMBL:AJ002598 EMBL:AY057683 EMBL:BT020317 EMBL:BT020302
EMBL:BT025757 IPI:IPI00532035 PIR:G85435 PIR:T52619
RefSeq:NP_195408.1 UniGene:At.461 ProteinModelPortal:Q9SW63
SMR:Q9SW63 EnsemblPlants:AT4G36900.1 GeneID:829843
KEGG:ath:AT4G36900 TAIR:At4g36900 eggNOG:NOG321299
InParanoid:Q9SW63 OMA:ECSSKEG PhylomeDB:Q9SW63
Genevestigator:Q9SW63 Uniprot:Q9SW63
Length = 196
Score = 111 (44.1 bits), Expect = 0.00029, P = 0.00029
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 23 SISSTPLIPATKRLRHASAVSKFKGVVPQQNGHWGAQIYANHQR--IWLGTFKSEKDAAM 80
++ STP + + +KG+ ++ G W A+I ++R IWLG++ + + AA
Sbjct: 9 TVVSTPAVTVAA-VATRKRDKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPEAAAR 67
Query: 81 AYDSAAIRLRGVDSHRNFP 99
AYD+A LRG + NFP
Sbjct: 68 AYDTAVFYLRGPSARLNFP 86
>TAIR|locus:2058641 [details] [associations]
symbol:DEAR3 "DREB and EAR motif protein 3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC002391 HOGENOM:HOG000237624
EMBL:AK118495 EMBL:BT003741 IPI:IPI00528876 PIR:T00498
RefSeq:NP_179915.1 UniGene:At.43320 ProteinModelPortal:O22174
SMR:O22174 EnsemblPlants:AT2G23340.1 GeneID:816866
KEGG:ath:AT2G23340 TAIR:At2g23340 eggNOG:NOG273209
InParanoid:O22174 OMA:LPDPENS PhylomeDB:O22174
ProtClustDB:CLSN2683886 Genevestigator:O22174 Uniprot:O22174
Length = 176
Score = 109 (43.4 bits), Expect = 0.00030, P = 0.00030
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 45 FKGVVPQQNGHWGAQIYANHQR--IWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
+KG+ ++ G W A+I ++R IWLG++ + + AA AYD+A LRG + NFP
Sbjct: 28 YKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSARLNFP 84
>UNIPROTKB|Q5MFV2 [details] [associations]
symbol:BIERF2 "BTH-induced ERF transcriptional factor 2"
species:39946 "Oryza sativa Indica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AY831393 ProteinModelPortal:Q5MFV2 SMR:Q5MFV2
Gramene:Q5MFV2 Uniprot:Q5MFV2
Length = 235
Score = 113 (44.8 bits), Expect = 0.00032, P = 0.00032
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 45 FKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPW 100
++GV + G + A+I A R+WLGT+ + ++AA AYD+AA RG + NFP+
Sbjct: 34 YRGVRKRPWGRYAAEIRDPAKKSRVWLGTYDTAEEAARAYDAAAREFRGAKAKTNFPF 91
>TAIR|locus:2131834 [details] [associations]
symbol:CBF2 "C-repeat/DRE binding factor 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009631 "cold acclimation" evidence=IMP]
[GO:0009409 "response to cold" evidence=IEP;TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009631
EMBL:AL022197 EMBL:AL161563 KO:K09286 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AF076155 EMBL:AY667247 ProtClustDB:CLSN2687445
HOGENOM:HOG000237624 EMBL:AB007789 EMBL:AB013817 EMBL:AF074601
EMBL:AF062925 EMBL:BT028991 IPI:IPI00525791 PIR:JE0299
RefSeq:NP_567719.1 UniGene:At.233 ProteinModelPortal:Q9SYS6
SMR:Q9SYS6 STRING:Q9SYS6 PRIDE:Q9SYS6 EnsemblPlants:AT4G25470.1
GeneID:828651 KEGG:ath:AT4G25470 GeneFarm:3597 TAIR:At4g25470
eggNOG:NOG298542 InParanoid:Q9SYS6 OMA:ESTCAKE PhylomeDB:Q9SYS6
Genevestigator:Q9SYS6 GermOnline:AT4G25470 Uniprot:Q9SYS6
Length = 216
Score = 112 (44.5 bits), Expect = 0.00033, P = 0.00033
Identities = 32/94 (34%), Positives = 54/94 (57%)
Query: 7 SIISNGETNVIPELSDSISSTPLIPATKRLRHASAVSKFKGVVPQQNGHWGAQIYANHQ- 65
S +S+G + P+L+ +S P PA ++ + ++GV + +G W ++ ++
Sbjct: 17 SPVSSGG-DYSPKLA---TSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVCELREPNKK 72
Query: 66 -RIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNF 98
RIWLGTF++ + AA A+D AAI LRG + NF
Sbjct: 73 TRIWLGTFQTAEMAARAHDVAAIALRGRSACLNF 106
>TAIR|locus:2076720 [details] [associations]
symbol:CRF6 "AT3G61630" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IGI] [GO:0042991 "transcription factor import
into nucleus" evidence=RCA;IDA] [GO:0048366 "leaf development"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
GO:GO:0005737 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736 GO:GO:0048366
EMBL:AL132959 GO:GO:0048825 GO:GO:0042991 HOGENOM:HOG000237664
ProtClustDB:CLSN2683458 EMBL:BX822244 IPI:IPI00528170 PIR:T47955
RefSeq:NP_191722.1 UniGene:At.34258 ProteinModelPortal:Q9M374
SMR:Q9M374 IntAct:Q9M374 STRING:Q9M374 EnsemblPlants:AT3G61630.1
GeneID:825336 KEGG:ath:AT3G61630 TAIR:At3g61630 eggNOG:NOG296971
InParanoid:Q9M374 OMA:HINEIRI PhylomeDB:Q9M374
Genevestigator:Q9M374 Uniprot:Q9M374
Length = 315
Score = 115 (45.5 bits), Expect = 0.00038, P = 0.00038
Identities = 45/159 (28%), Positives = 74/159 (46%)
Query: 44 KFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPWT 101
K++GV + G + A+I ++ RIWLGTF + ++AA+AYD AAI L+G + NF
Sbjct: 104 KYRGVRQRPWGKFAAEIRDPSSRTRIWLGTFVTAEEAAIAYDRAAIHLKGPKALTNF--- 160
Query: 102 KITIEEPNFQSHYSTEAVINMIRDGSYSSRQLFQKELTPSDVGKLNRLVIPKKYAVKYFP 161
+T P T + + RD SRQ +P+ V + N + ++ ++
Sbjct: 161 -LTPPTPTPVIDLQTVSACDYGRD----SRQSLH---SPTSVLRFN-VNEETEHEIEAIE 211
Query: 162 QISERVEEHAENDKADDVQLVFHDKSM--KLWKFRYCYW 198
ER + ++ LVF D + L C+W
Sbjct: 212 LSPERKSTVIKEEEESSAGLVFPDPYLLPDLSLAGECFW 250
>TAIR|locus:2198978 [details] [associations]
symbol:AT1G80580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009873 "ethylene mediated signaling pathway"
evidence=TAS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC018849 EMBL:AY560844 EMBL:DQ446446 EMBL:BT026038
IPI:IPI00519694 PIR:H96837 RefSeq:NP_178173.1 UniGene:At.50665
ProteinModelPortal:Q9M8M5 SMR:Q9M8M5 EnsemblPlants:AT1G80580.1
GeneID:844397 KEGG:ath:AT1G80580 TAIR:At1g80580 eggNOG:NOG291220
HOGENOM:HOG000090320 InParanoid:Q9M8M5 OMA:KPEPENT PhylomeDB:Q9M8M5
ProtClustDB:CLSN2714206 Genevestigator:Q9M8M5 Uniprot:Q9M8M5
Length = 256
Score = 113 (44.8 bits), Expect = 0.00040, P = 0.00040
Identities = 26/56 (46%), Positives = 33/56 (58%)
Query: 45 FKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNF 98
F GV + G W A+I R WLGTF + ++AA AYD+AA RLRG + NF
Sbjct: 116 FMGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRLRGTKAKTNF 171
>TAIR|locus:2137559 [details] [associations]
symbol:ANT "AINTEGUMENTA" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0042127 "regulation of
cell proliferation" evidence=RCA;IMP] [GO:0010492 "maintenance of
shoot apical meristem identity" evidence=IGI] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=RCA] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=IMP;RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010089 "xylem development" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031047 "gene silencing by RNA"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0007276 "gamete generation"
evidence=IMP] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709 EMBL:AL161592
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0042127
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009908 GO:GO:0010492
HOGENOM:HOG000239258 KO:K09285 EMBL:U40256 EMBL:U41339 EMBL:U44028
EMBL:AR316367 EMBL:AY080706 EMBL:AY117207 IPI:IPI00532315
PIR:S71365 RefSeq:NP_195489.1 UniGene:At.1556
ProteinModelPortal:Q38914 SMR:Q38914 STRING:Q38914 PaxDb:Q38914
PRIDE:Q38914 EnsemblPlants:AT4G37750.1 GeneID:829931
KEGG:ath:AT4G37750 GeneFarm:5116 TAIR:At4g37750 eggNOG:NOG313785
InParanoid:Q38914 OMA:NTTHEPN PhylomeDB:Q38914
ProtClustDB:CLSN2916050 Genevestigator:Q38914 GermOnline:AT4G37750
Uniprot:Q38914
Length = 555
Score = 118 (46.6 bits), Expect = 0.00044, P = 0.00044
Identities = 26/67 (38%), Positives = 44/67 (65%)
Query: 43 SKFKGVVPQ-QNGHWGAQI--YANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
S ++GV Q+G W A+I A ++ ++LGTF ++++AA AYD AAI+ RG ++ NF
Sbjct: 384 SIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDVAAIKFRGTNAVTNFD 443
Query: 100 WTKITIE 106
T+ ++
Sbjct: 444 ITRYDVD 450
>TAIR|locus:2173009 [details] [associations]
symbol:AIL5 "AINTEGUMENTA-like 5" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0009845 "seed
germination" evidence=RCA;IMP] [GO:0040019 "positive regulation of
embryonic development" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] [GO:0060771 "phyllotactic patterning" evidence=IGI]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=ISS;IMP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009845
HOGENOM:HOG000239258 KO:K09285 EMBL:AY585685 EMBL:AB016891
IPI:IPI00518096 RefSeq:NP_200549.2 UniGene:At.29336
ProteinModelPortal:Q6PQQ3 SMR:Q6PQQ3 EnsemblPlants:AT5G57390.1
GeneID:835845 KEGG:ath:AT5G57390 GeneFarm:2582 TAIR:At5g57390
eggNOG:NOG258934 InParanoid:Q6PQQ3 OMA:WINNNIS PhylomeDB:Q6PQQ3
ProtClustDB:CLSN2681678 Genevestigator:Q6PQQ3 GO:GO:0060771
GO:GO:0040019 Uniprot:Q6PQQ3
Length = 558
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 25/67 (37%), Positives = 45/67 (67%)
Query: 43 SKFKGVVPQ-QNGHWGAQI--YANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
S ++GV Q+G W A+I A ++ ++LGTF ++++AA AYD AAI+ RG+++ NF
Sbjct: 304 SMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFD 363
Query: 100 WTKITIE 106
++ ++
Sbjct: 364 ISRYDVK 370
>TAIR|locus:2182993 [details] [associations]
symbol:PUCHI species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009908 "flower development" evidence=IMP]
[GO:0010102 "lateral root morphogenesis" evidence=IMP] [GO:0010432
"bract development" evidence=IGI;IMP] [GO:0010451 "floral meristem
growth" evidence=IMP] [GO:0010582 "floral meristem determinacy"
evidence=IGI;IMP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 GO:GO:0010582 EMBL:AC069328
EMBL:AY560873 IPI:IPI00532675 RefSeq:NP_197357.2 UniGene:At.49752
ProteinModelPortal:Q6J9Q2 SMR:Q6J9Q2 STRING:Q6J9Q2
EnsemblPlants:AT5G18560.1 GeneID:831974 KEGG:ath:AT5G18560
GeneFarm:2221 TAIR:At5g18560 eggNOG:NOG237521 HOGENOM:HOG000176627
InParanoid:Q6J9Q2 OMA:SAMITNY Genevestigator:Q6J9Q2 GO:GO:0010432
GO:GO:0010451 GO:GO:0010102 Uniprot:Q6J9Q2
Length = 348
Score = 115 (45.5 bits), Expect = 0.00046, P = 0.00046
Identities = 29/85 (34%), Positives = 44/85 (51%)
Query: 34 KRLRHASAVSKFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEKDAAMAYDSAAIRLRG 91
+R + A +F GV + G + A+I +R WLGTF + +AA+AYD AA+ +RG
Sbjct: 45 RRSKQAEP-GRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRG 103
Query: 92 VDSHRNFPWTKITIE----EPNFQS 112
+ NF +T + PN S
Sbjct: 104 TQARTNFVYTPTDVHTILTNPNLHS 128
>TAIR|locus:2030265 [details] [associations]
symbol:AT1G72570 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=ISS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
EMBL:AY603417 EMBL:AC010926 EMBL:DQ446422 EMBL:DQ652930
IPI:IPI00529030 PIR:B96750 RefSeq:NP_177401.2 UniGene:At.50661
ProteinModelPortal:Q1PFE1 SMR:Q1PFE1 EnsemblPlants:AT1G72570.1
GeneID:843589 KEGG:ath:AT1G72570 TAIR:At1g72570 eggNOG:NOG295761
HOGENOM:HOG000239258 InParanoid:Q1PFE1 KO:K09285 OMA:TPPLRIC
PhylomeDB:Q1PFE1 ProtClustDB:CLSN2920249 Genevestigator:Q1PFE1
Uniprot:Q1PFE1
Length = 415
Score = 116 (45.9 bits), Expect = 0.00048, P = 0.00048
Identities = 25/59 (42%), Positives = 41/59 (69%)
Query: 43 SKFKGVVPQ-QNGHWGAQI--YANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNF 98
S ++GV Q+G W A+I A ++ ++LGTF ++++AA AYD AAI+ RG+++ NF
Sbjct: 324 SVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNF 382
>TAIR|locus:2202205 [details] [associations]
symbol:ARF19 "auxin response factor 19" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0048366 "leaf
development" evidence=IGI] [GO:0048527 "lateral root development"
evidence=IGI;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0010311
"lateral root formation" evidence=IGI] [GO:0007155 "cell adhesion"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0010583 "response to cyclopentenone" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0009723 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0046983 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010311 GO:GO:0048366 HOGENOM:HOG000241141
EMBL:U53672 EMBL:AY008390 EMBL:AY669794 EMBL:AC069143 EMBL:AB493467
EMBL:AJ441312 IPI:IPI00534870 PIR:G86325 RefSeq:NP_173356.1
UniGene:At.10488 ProteinModelPortal:Q8RYC8 SMR:Q8RYC8 IntAct:Q8RYC8
STRING:Q8RYC8 EnsemblPlants:AT1G19220.1 GeneID:838505
KEGG:ath:AT1G19220 GeneFarm:3421 TAIR:At1g19220 eggNOG:NOG331338
InParanoid:Q8RYC8 OMA:WEIEPVI PhylomeDB:Q8RYC8
ProtClustDB:CLSN2914206 Genevestigator:Q8RYC8 GermOnline:AT1G19220
Uniprot:Q8RYC8
Length = 1086
Score = 121 (47.7 bits), Expect = 0.00048, P = 0.00048
Identities = 38/150 (25%), Positives = 68/150 (45%)
Query: 93 DSHRNFPWTKITIEEPNFQSHYSTEAVI--NMIRDGSYSSRQLFQKELTPSDVGKLNRLV 150
D+ + + ++T++ N Y EA++ +M + + F K LT SD
Sbjct: 86 DTETDEVYAQMTLQPVN---KYDREALLASDMGLKLNRQPTEFFCKTLTASDTSTHGGFS 142
Query: 151 IPKKYAVKYFPQISERVEEHAENDKADDVQLVFHDKSMKLWKFRYCYWKSSQSFVFTRGW 210
+P++ A K FP + ++ A+ A D+ HD + W FR+ Y + + T GW
Sbjct: 143 VPRRAAEKIFPPLDFSMQPPAQEIVAKDL----HDTT---WTFRHIYRGQPKRHLLTTGW 195
Query: 211 NRFVKENQLKANDTICFYLCELRDIAKGTK 240
+ FV +L A D++ F E + G +
Sbjct: 196 SVFVSTKRLFAGDSVLFVRDEKSQLMLGIR 225
>TAIR|locus:2131854 [details] [associations]
symbol:CBF1 "C-repeat/DRE binding factor 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009409 "response to cold" evidence=IEP;IMP;TAS]
[GO:0009631 "cold acclimation" evidence=IEP;IMP] [GO:0009414
"response to water deprivation" evidence=IEP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IGI;IDA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 GO:GO:0045893
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009631 EMBL:AL022197 EMBL:AL161563 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AF076155 EMBL:AY667247
eggNOG:NOG303203 ProtClustDB:CLSN2687445 EMBL:U77378 EMBL:AB007788
EMBL:AB013816 IPI:IPI00540988 PIR:JE0298 RefSeq:NP_567721.1
UniGene:At.232 ProteinModelPortal:P93835 SMR:P93835 IntAct:P93835
STRING:P93835 PRIDE:P93835 EnsemblPlants:AT4G25490.1 GeneID:828653
KEGG:ath:AT4G25490 GeneFarm:3595 TAIR:At4g25490
HOGENOM:HOG000237624 InParanoid:P93835 PhylomeDB:P93835
Genevestigator:P93835 GermOnline:AT4G25490 Uniprot:P93835
Length = 213
Score = 110 (43.8 bits), Expect = 0.00053, P = 0.00053
Identities = 26/76 (34%), Positives = 45/76 (59%)
Query: 25 SSTPLIPATKRLRHASAVSKFKGVVPQQNGHWGAQIYANHQ--RIWLGTFKSEKDAAMAY 82
+S P PA ++ + ++GV + +G W +++ ++ RIWLGTF++ + AA A+
Sbjct: 28 TSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAH 87
Query: 83 DSAAIRLRGVDSHRNF 98
D AA+ LRG + NF
Sbjct: 88 DVAALALRGRSACLNF 103
>TAIR|locus:504956445 [details] [associations]
symbol:AT5G21960 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC140977 EMBL:AL589883
HOGENOM:HOG000237624 EMBL:AY560866 EMBL:BT011577 EMBL:BT012243
IPI:IPI00534105 RefSeq:NP_680184.1 UniGene:At.45636
ProteinModelPortal:Q9C591 SMR:Q9C591 EnsemblPlants:AT5G21960.1
GeneID:832256 KEGG:ath:AT5G21960 TAIR:At5g21960 eggNOG:NOG289112
InParanoid:Q9C591 OMA:RFACEEE PhylomeDB:Q9C591
ProtClustDB:CLSN2917830 Genevestigator:Q9C591 Uniprot:Q9C591
Length = 216
Score = 110 (43.8 bits), Expect = 0.00055, P = 0.00055
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 41 AVSKFKGVVPQQNGHWGAQIYA--NHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNF 98
A K+ GV ++ G W A+I + RIWLG+F S + AA A+D+A LRG + NF
Sbjct: 3 ASPKYTGVRKRKWGKWVAEIRLPNSRDRIWLGSFDSAEKAARAFDAALYCLRGPGARFNF 62
Query: 99 P 99
P
Sbjct: 63 P 63
>TAIR|locus:2176187 [details] [associations]
symbol:AT5G51190 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009612 "response to mechanical stimulus"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010200 HSSP:O80337 EMBL:AB023044 HOGENOM:HOG000272710
EMBL:AY072345 EMBL:AY114590 EMBL:AY086290 IPI:IPI00545838
RefSeq:NP_568755.1 UniGene:At.19728 ProteinModelPortal:Q8VY90
SMR:Q8VY90 STRING:Q8VY90 PaxDb:Q8VY90 EnsemblPlants:AT5G51190.1
GeneID:835193 KEGG:ath:AT5G51190 TAIR:At5g51190 eggNOG:NOG301109
InParanoid:Q8VY90 OMA:PLEAGKH PhylomeDB:Q8VY90
ProtClustDB:CLSN2917752 Genevestigator:Q8VY90 Uniprot:Q8VY90
Length = 221
Score = 110 (43.8 bits), Expect = 0.00060, P = 0.00060
Identities = 29/96 (30%), Positives = 50/96 (52%)
Query: 7 SIISNGETNVIPELSDSISSTPLIPATKRLRHASAVSKFKGVVPQQNGHWGAQIYANHQ- 65
S I + T+ + + ++ T +P T + + ++GV + G + A+I ++
Sbjct: 35 STIHHCTTSTLSQRKPPLA-TIAVPTTAPVVQENDQRHYRGVRRRPWGKYAAEIRDPNKK 93
Query: 66 --RIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
R+WLGTF + +AA YD AA +LRG + NFP
Sbjct: 94 GVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFP 129
>TAIR|locus:2005493 [details] [associations]
symbol:AP2 "APETALA 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS;TAS]
[GO:0010093 "specification of floral organ identity" evidence=IMP]
[GO:0048316 "seed development" evidence=IMP] [GO:0010073 "meristem
maintenance" evidence=IMP] [GO:0009888 "tissue development"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA;TAS]
[GO:0048481 "ovule development" evidence=IGI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009908 "flower development" evidence=TAS] [GO:0019953 "sexual
reproduction" evidence=TAS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0030154 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048316
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010093 GO:GO:0048481
EMBL:Z99707 EMBL:AL161590 EMBL:U12546 EMBL:AY128328 IPI:IPI00523209
PIR:A85436 RefSeq:NP_001190938.1 RefSeq:NP_195410.1 UniGene:At.4638
ProteinModelPortal:P47927 SMR:P47927 STRING:P47927
EnsemblPlants:AT4G36920.1 EnsemblPlants:AT4G36920.2 GeneID:829845
KEGG:ath:AT4G36920 TAIR:At4g36920 eggNOG:NOG247476
HOGENOM:HOG000033977 InParanoid:P47927 KO:K09284 OMA:SIYDEEL
PhylomeDB:P47927 ProtClustDB:CLSN2915922 Genevestigator:P47927
GermOnline:AT4G36920 GO:GO:0010073 Uniprot:P47927
Length = 432
Score = 115 (45.5 bits), Expect = 0.00066, P = 0.00066
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 43 SKFKGVVPQQNGHWGAQI--YANHQRIWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFPW 100
SK++GV + G W A++ + + ++LG F +E +AA AYD AAI+ G D+ NF
Sbjct: 222 SKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDKAAIKCNGKDAVTNFD- 280
Query: 101 TKITIEEPNFQS 112
I EE N +S
Sbjct: 281 PSIYDEELNAES 292
>TAIR|locus:2155498 [details] [associations]
symbol:DEAR2 "DREB and EAR motif protein 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB020742 HOGENOM:HOG000237624
EMBL:AY560860 EMBL:DQ447114 EMBL:DQ653394 EMBL:BT025744
IPI:IPI00524496 RefSeq:NP_201520.1 UniGene:At.50633
ProteinModelPortal:Q9FH94 SMR:Q9FH94 EnsemblPlants:AT5G67190.1
GeneID:836854 KEGG:ath:AT5G67190 TAIR:At5g67190 eggNOG:NOG289312
InParanoid:Q9FH94 OMA:DEEWESK PhylomeDB:Q9FH94
ProtClustDB:CLSN2914757 Genevestigator:Q9FH94 Uniprot:Q9FH94
Length = 184
Score = 107 (42.7 bits), Expect = 0.00068, P = 0.00068
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 45 FKGVVPQQNGHWGAQIYANHQR--IWLGTFKSEKDAAMAYDSAAIRLRGVDSHRNFP 99
+KG+ ++ G W A+I ++R +WLG++ + + AA AYD+A LRG + NFP
Sbjct: 21 YKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARLNFP 77
>TAIR|locus:2010529 [details] [associations]
symbol:AT1G28160 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009873 "ethylene mediated signaling pathway"
evidence=TAS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC069471 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC021044 EMBL:AY560863
EMBL:DQ446295 EMBL:DQ652864 IPI:IPI00523290 PIR:E86407
RefSeq:NP_174138.1 UniGene:At.50650 ProteinModelPortal:Q9FZ90
SMR:Q9FZ90 EnsemblPlants:AT1G28160.1 GeneID:839710
KEGG:ath:AT1G28160 TAIR:At1g28160 eggNOG:NOG323238
HOGENOM:HOG000239107 InParanoid:Q9FZ90 OMA:TTKERYW PhylomeDB:Q9FZ90
ProtClustDB:CLSN2914663 Genevestigator:Q9FZ90 Uniprot:Q9FZ90
Length = 245
Score = 110 (43.8 bits), Expect = 0.00080, P = 0.00080
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 31 PATKRLRHASAVSKFKGVVPQQNGHWGAQIY--ANHQRIWLGTFKSEKDAAMAYDSAAIR 88
P + +H + K+ GV + G + A+I +R WLGTF + ++AA+AYD AA
Sbjct: 26 PQPQPQQHIEEI-KYVGVRRRPWGRYAAEIRNPTTKERYWLGTFDTAEEAALAYDRAARS 84
Query: 89 LRGVDSHRNFPWT 101
+RG+ + NF ++
Sbjct: 85 IRGLTARTNFVYS 97
>TAIR|locus:2026145 [details] [associations]
symbol:ARF12 "auxin response factor 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 EMBL:AY669792 EMBL:AC007454
IPI:IPI00544760 PIR:C86467 RefSeq:NP_174691.2 UniGene:At.51185
ProteinModelPortal:Q9XID4 SMR:Q9XID4 IntAct:Q9XID4
EnsemblPlants:AT1G34310.1 GeneID:840331 KEGG:ath:AT1G34310
GeneFarm:3390 TAIR:At1g34310 eggNOG:NOG264447 PhylomeDB:Q9XID4
ProtClustDB:CLSN2681760 ArrayExpress:Q9XID4 Genevestigator:Q9XID4
GermOnline:AT1G34310 Uniprot:Q9XID4
Length = 593
Score = 116 (45.9 bits), Expect = 0.00081, P = 0.00080
Identities = 41/156 (26%), Positives = 69/156 (44%)
Query: 86 AIRLRGVDSHRNFPWTKITIEEPNFQSHYSTEAVINMIRDGSYSSR-QLFQKELTPSDVG 144
AI L+ V+++ + + +IT+ P+ +T+ VI + + F K LT SD
Sbjct: 84 AIHLK-VENNSDETYAEITLM-PD-----TTQVVIPTQNENQFRPLVNSFTKVLTASDTS 136
Query: 145 KLNRLVIPKKYAVKYFPQISERVEEHAENDKADDVQLVFHDKSMKLWKFRYCYWKSSQSF 204
+PKK+A++ P + A+ A D+ H W+F + Y + Q
Sbjct: 137 AHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDL----HGNQ---WRFNHNYRGTPQRH 189
Query: 205 VFTRGWNRFVKENQLKANDTICFYLCELRDIAKGTK 240
+ T GWN F +L A D I F E ++ G +
Sbjct: 190 LLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIR 225
>TAIR|locus:2114668 [details] [associations]
symbol:AT3G49610 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003340 PROSITE:PS50863
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL132964 InterPro:IPR005508 Pfam:PF03754
HOGENOM:HOG000155000 EMBL:AB493642 IPI:IPI00537694 PIR:T46238
RefSeq:NP_190530.1 UniGene:At.65264 ProteinModelPortal:Q9SCJ8
EnsemblPlants:AT3G49610.1 GeneID:824123 KEGG:ath:AT3G49610
TAIR:At3g49610 eggNOG:NOG308761 InParanoid:Q9SCJ8 OMA:SSCVMEN
PhylomeDB:Q9SCJ8 ProtClustDB:CLSN2913498 Genevestigator:Q9SCJ8
Uniprot:Q9SCJ8
Length = 334
Score = 112 (44.5 bits), Expect = 0.00093, P = 0.00093
Identities = 36/112 (32%), Positives = 54/112 (48%)
Query: 133 LFQKELTPSDVGKL-NRLVIP-KKYAVKYF--PQISERV----EEHAENDKADDVQLVFH 184
+++K LT +DV +RL+IP K F P+ S + EE E+ K V+ +
Sbjct: 208 IYEKTLTATDVKPSESRLLIPFNKLLRNDFLTPEESRAIAIDKEEEEEDTKKIGVKTIIV 267
Query: 185 DKSMKLWKFRYCYW--KSSQS------FVFTRGWNRFVKENQLKANDTICFY 228
++ K W R+ W K +S + RGWN V N+LKAND I +
Sbjct: 268 NQFSKEWSLRFLIWVMKKKKSGNGTLYYTLNRGWNGVVSGNKLKANDNISLW 319
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.380 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 322 322 0.00085 116 3 11 23 0.43 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 128
No. of states in DFA: 607 (65 KB)
Total size of DFA: 228 KB (2126 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.47u 0.24s 29.71t Elapsed: 00:00:01
Total cpu time: 29.48u 0.24s 29.72t Elapsed: 00:00:01
Start: Fri May 10 06:07:13 2013 End: Fri May 10 06:07:14 2013
WARNINGS ISSUED: 1