Query 020735
Match_columns 322
No_of_seqs 267 out of 2113
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 07:25:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020735.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020735hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ro3_A PINS homolog, G-protein 99.6 2.5E-14 8.4E-19 115.2 20.3 139 173-321 23-161 (164)
2 4gco_A Protein STI-1; structur 99.6 4.8E-15 1.7E-19 118.7 14.0 103 207-321 11-113 (126)
3 3gyz_A Chaperone protein IPGC; 99.6 1.8E-15 6.2E-20 125.6 10.8 104 206-321 33-136 (151)
4 1qqe_A Vesicular transport pro 99.6 7.9E-14 2.7E-18 126.9 20.9 139 172-320 50-189 (292)
5 4gcn_A Protein STI-1; structur 99.6 1.8E-14 6.1E-19 115.3 14.5 108 207-320 6-114 (127)
6 3u3w_A Transcriptional activat 99.6 6.8E-14 2.3E-18 127.0 19.1 137 174-320 130-268 (293)
7 4ga2_A E3 SUMO-protein ligase 99.6 8.1E-15 2.8E-19 120.6 11.7 120 174-321 12-132 (150)
8 3gw4_A Uncharacterized protein 99.6 2E-13 6.9E-18 115.3 20.5 139 173-321 40-179 (203)
9 3ulq_A Response regulator aspa 99.6 2.9E-13 1E-17 126.9 21.8 140 171-320 155-295 (383)
10 3ulq_A Response regulator aspa 99.6 2.6E-13 8.8E-18 127.3 21.2 139 172-320 116-255 (383)
11 4gyw_A UDP-N-acetylglucosamine 99.6 4.3E-14 1.5E-18 144.9 16.2 99 209-319 77-175 (723)
12 2ifu_A Gamma-SNAP; membrane fu 99.6 1.7E-13 5.8E-18 125.5 18.5 131 175-316 92-222 (307)
13 2qfc_A PLCR protein; TPR, HTH, 99.5 2.5E-13 8.4E-18 123.3 18.6 137 174-320 130-268 (293)
14 2vgx_A Chaperone SYCD; alterna 99.5 8.1E-14 2.8E-18 114.5 13.5 102 208-321 20-121 (148)
15 3q15_A PSP28, response regulat 99.5 3.9E-13 1.3E-17 126.1 19.9 136 174-319 116-252 (378)
16 3q15_A PSP28, response regulat 99.5 8.8E-13 3E-17 123.7 20.7 137 173-320 155-292 (378)
17 3ro3_A PINS homolog, G-protein 99.5 5.8E-13 2E-17 107.0 16.7 118 203-320 3-120 (164)
18 2xcb_A PCRH, regulatory protei 99.5 1.4E-13 4.7E-18 111.6 12.5 103 207-321 16-118 (142)
19 2hr2_A Hypothetical protein; a 99.5 6.8E-13 2.3E-17 110.8 16.8 115 208-322 10-135 (159)
20 2qfc_A PLCR protein; TPR, HTH, 99.5 8.2E-13 2.8E-17 119.8 18.2 152 159-320 75-227 (293)
21 3upv_A Heat shock protein STI1 99.5 3.2E-13 1.1E-17 106.5 13.2 100 208-319 3-102 (126)
22 3sz7_A HSC70 cochaperone (SGT) 99.5 3.1E-13 1.1E-17 111.8 13.6 105 205-321 7-111 (164)
23 2pl2_A Hypothetical conserved 99.5 3.2E-13 1.1E-17 117.5 14.0 122 170-319 16-148 (217)
24 2ifu_A Gamma-SNAP; membrane fu 99.5 1.1E-12 3.9E-17 120.0 17.6 141 169-320 46-186 (307)
25 1qqe_A Vesicular transport pro 99.5 1.1E-12 3.9E-17 119.1 17.3 149 162-320 80-230 (292)
26 3u3w_A Transcriptional activat 99.5 9.1E-13 3.1E-17 119.5 16.7 149 161-320 77-227 (293)
27 3vtx_A MAMA; tetratricopeptide 99.5 1.6E-12 5.5E-17 108.8 16.9 120 174-321 54-173 (184)
28 3urz_A Uncharacterized protein 99.5 4.9E-13 1.7E-17 115.5 13.9 130 163-320 8-188 (208)
29 3rkv_A Putative peptidylprolyl 99.5 1.1E-12 3.7E-17 108.3 15.2 109 207-321 9-129 (162)
30 2pl2_A Hypothetical conserved 99.5 5.2E-13 1.8E-17 116.1 13.3 123 170-321 50-183 (217)
31 3sf4_A G-protein-signaling mod 99.5 5.8E-12 2E-16 116.9 21.0 138 173-320 201-338 (406)
32 3ro2_A PINS homolog, G-protein 99.5 5.9E-12 2E-16 112.9 20.0 138 174-321 198-335 (338)
33 4i17_A Hypothetical protein; T 99.4 1.3E-12 4.5E-17 113.3 14.7 131 162-320 10-148 (228)
34 3sf4_A G-protein-signaling mod 99.4 1.3E-11 4.6E-16 114.4 22.2 136 175-320 163-298 (406)
35 4a1s_A PINS, partner of inscut 99.4 5.8E-12 2E-16 118.0 19.7 137 174-320 238-374 (411)
36 4gyw_A UDP-N-acetylglucosamine 99.4 6.3E-13 2.2E-17 136.3 13.8 133 161-321 11-143 (723)
37 3gw4_A Uncharacterized protein 99.4 8.9E-12 3E-16 105.0 18.5 113 208-320 25-138 (203)
38 4a1s_A PINS, partner of inscut 99.4 1.3E-11 4.3E-16 115.7 21.1 136 175-320 199-334 (411)
39 3vtx_A MAMA; tetratricopeptide 99.4 3.9E-12 1.3E-16 106.4 15.7 128 166-321 12-139 (184)
40 1hh8_A P67PHOX, NCF-2, neutrop 99.4 1.5E-12 5.1E-17 111.2 13.4 130 166-320 13-152 (213)
41 3ro2_A PINS homolog, G-protein 99.4 1.8E-11 6.3E-16 109.6 21.2 136 175-320 159-294 (338)
42 3edt_B KLC 2, kinesin light ch 99.4 1.1E-11 3.6E-16 109.0 18.6 143 170-320 54-200 (283)
43 3q49_B STIP1 homology and U bo 99.4 4.2E-12 1.4E-16 100.7 13.3 102 208-321 8-109 (137)
44 3edt_B KLC 2, kinesin light ch 99.4 9.3E-12 3.2E-16 109.3 16.8 136 176-319 18-157 (283)
45 1hxi_A PEX5, peroxisome target 99.4 1.6E-12 5.3E-17 103.1 10.4 99 211-321 19-117 (121)
46 4i17_A Hypothetical protein; T 99.4 3.7E-12 1.3E-16 110.4 13.5 129 171-321 54-212 (228)
47 4gco_A Protein STI-1; structur 99.4 4E-12 1.4E-16 101.5 12.6 112 160-299 14-125 (126)
48 3nf1_A KLC 1, kinesin light ch 99.4 1.8E-11 6.2E-16 109.3 18.1 140 172-319 40-183 (311)
49 2h6f_A Protein farnesyltransfe 99.4 1.7E-12 5.9E-17 123.4 11.2 128 166-321 138-272 (382)
50 3nf1_A KLC 1, kinesin light ch 99.4 3.6E-11 1.2E-15 107.4 18.7 140 173-320 83-226 (311)
51 2e2e_A Formate-dependent nitri 99.4 4.1E-12 1.4E-16 105.9 11.3 120 174-321 25-147 (177)
52 3uq3_A Heat shock protein STI1 99.4 4.6E-11 1.6E-15 103.7 18.3 132 174-320 53-204 (258)
53 1elw_A TPR1-domain of HOP; HOP 99.4 1.4E-11 4.8E-16 93.9 13.0 102 208-321 3-104 (118)
54 2fo7_A Synthetic consensus TPR 99.3 3E-11 1E-15 93.7 15.1 121 173-321 15-135 (136)
55 1xnf_A Lipoprotein NLPI; TPR, 99.3 1.7E-11 5.8E-16 107.9 15.3 124 174-321 20-143 (275)
56 1a17_A Serine/threonine protei 99.3 2.7E-11 9.4E-16 98.5 15.3 132 161-320 15-148 (166)
57 3as5_A MAMA; tetratricopeptide 99.3 2.8E-11 9.5E-16 99.4 15.4 120 174-321 57-176 (186)
58 2vyi_A SGTA protein; chaperone 99.3 2.6E-11 8.7E-16 94.0 14.0 105 205-321 8-112 (131)
59 3uq3_A Heat shock protein STI1 99.3 3E-11 1E-15 104.9 16.0 118 174-319 120-237 (258)
60 2xev_A YBGF; tetratricopeptide 99.3 1.2E-11 4.3E-16 96.9 12.3 105 211-321 4-108 (129)
61 4ga2_A E3 SUMO-protein ligase 99.3 1.1E-12 3.7E-17 107.8 6.2 96 214-321 2-97 (150)
62 1elr_A TPR2A-domain of HOP; HO 99.3 4.1E-11 1.4E-15 93.0 14.7 107 208-320 3-110 (131)
63 3as5_A MAMA; tetratricopeptide 99.3 4E-11 1.4E-15 98.5 15.4 123 170-320 19-141 (186)
64 1a17_A Serine/threonine protei 99.3 2.6E-11 9E-16 98.6 14.1 104 206-321 10-113 (166)
65 3urz_A Uncharacterized protein 99.3 2E-11 6.8E-16 105.3 14.0 101 209-321 4-120 (208)
66 3qky_A Outer membrane assembly 99.3 2.1E-11 7.2E-16 108.1 14.4 142 161-321 17-180 (261)
67 1p5q_A FKBP52, FK506-binding p 99.3 2.9E-11 9.8E-16 112.5 15.7 147 161-320 149-296 (336)
68 2lni_A Stress-induced-phosphop 99.3 1E-11 3.5E-16 97.1 10.7 103 207-321 14-116 (133)
69 3n71_A Histone lysine methyltr 99.3 8.8E-11 3E-15 115.2 19.5 145 166-319 316-465 (490)
70 1p5q_A FKBP52, FK506-binding p 99.3 1.5E-11 5.2E-16 114.4 12.7 108 208-321 146-262 (336)
71 2fbn_A 70 kDa peptidylprolyl i 99.3 2.8E-11 9.5E-16 103.0 12.8 110 206-321 35-154 (198)
72 2dba_A Smooth muscle cell asso 99.3 2.6E-11 9E-16 96.7 11.6 105 208-321 27-131 (148)
73 1hz4_A MALT regulatory protein 99.3 5.5E-10 1.9E-14 103.6 22.2 136 174-320 29-166 (373)
74 1na0_A Designed protein CTPR3; 99.3 8.4E-11 2.9E-15 90.2 13.6 102 208-321 8-109 (125)
75 2vq2_A PILW, putative fimbrial 99.3 1.3E-10 4.5E-15 98.7 16.1 121 174-320 57-178 (225)
76 3k9i_A BH0479 protein; putativ 99.3 1E-11 3.6E-16 97.0 8.4 89 221-321 2-93 (117)
77 2q7f_A YRRB protein; TPR, prot 99.3 5.2E-11 1.8E-15 102.8 13.5 121 173-321 105-225 (243)
78 2kck_A TPR repeat; tetratricop 99.3 1.1E-11 3.6E-16 93.9 7.5 99 211-321 8-109 (112)
79 2q7f_A YRRB protein; TPR, prot 99.3 1.1E-10 3.8E-15 100.7 14.9 119 174-320 72-190 (243)
80 3upv_A Heat shock protein STI1 99.3 1.6E-10 5.5E-15 90.7 14.4 120 161-302 6-125 (126)
81 4eqf_A PEX5-related protein; a 99.3 7.5E-11 2.6E-15 108.9 14.4 127 173-321 113-279 (365)
82 2h6f_A Protein farnesyltransfe 99.3 1.5E-11 5.3E-16 116.9 9.9 120 174-321 112-232 (382)
83 3u4t_A TPR repeat-containing p 99.2 1.3E-11 4.4E-16 108.9 8.5 97 211-319 76-172 (272)
84 3hym_B Cell division cycle pro 99.2 3.9E-11 1.3E-15 108.1 11.9 126 174-321 174-302 (330)
85 4eqf_A PEX5-related protein; a 99.2 1.3E-10 4.4E-15 107.3 15.5 130 170-321 76-245 (365)
86 4abn_A Tetratricopeptide repea 99.2 4.8E-11 1.6E-15 116.2 13.1 127 166-321 144-290 (474)
87 2vsy_A XCC0866; transferase, g 99.2 1.1E-10 3.8E-15 115.4 15.9 124 170-321 34-160 (568)
88 1fch_A Peroxisomal targeting s 99.2 1.6E-10 5.6E-15 106.1 15.9 128 168-321 190-317 (368)
89 1hz4_A MALT regulatory protein 99.2 4E-10 1.4E-14 104.6 18.7 139 171-320 65-205 (373)
90 1kt0_A FKBP51, 51 kDa FK506-bi 99.2 5.2E-11 1.8E-15 115.5 13.0 109 207-321 266-383 (457)
91 2ho1_A Type 4 fimbrial biogene 99.2 9.8E-11 3.3E-15 102.1 13.5 119 174-320 86-206 (252)
92 2pzi_A Probable serine/threoni 99.2 1.2E-11 4.2E-16 125.8 8.5 126 166-320 440-565 (681)
93 3hym_B Cell division cycle pro 99.2 9.6E-11 3.3E-15 105.5 13.5 130 170-321 136-268 (330)
94 2vsy_A XCC0866; transferase, g 99.2 3.7E-11 1.3E-15 118.9 11.7 120 174-321 4-123 (568)
95 3n71_A Histone lysine methyltr 99.2 2.3E-10 7.8E-15 112.2 16.7 110 211-320 311-424 (490)
96 1ihg_A Cyclophilin 40; ppiase 99.2 1.3E-10 4.5E-15 109.8 14.2 109 207-321 221-339 (370)
97 3cv0_A Peroxisome targeting si 99.2 2.7E-10 9.3E-15 102.4 15.6 121 173-321 152-272 (327)
98 2vq2_A PILW, putative fimbrial 99.2 2.2E-10 7.5E-15 97.3 14.2 102 208-321 112-214 (225)
99 2ho1_A Type 4 fimbrial biogene 99.2 1.9E-10 6.5E-15 100.3 14.1 120 174-321 120-241 (252)
100 2c2l_A CHIP, carboxy terminus 99.2 6.8E-11 2.3E-15 107.1 11.5 101 209-321 4-104 (281)
101 1xnf_A Lipoprotein NLPI; TPR, 99.2 4.1E-10 1.4E-14 99.0 15.5 124 174-320 92-246 (275)
102 1w3b_A UDP-N-acetylglucosamine 99.2 1.1E-10 3.8E-15 108.8 12.4 100 209-320 237-336 (388)
103 3qky_A Outer membrane assembly 99.2 1.9E-10 6.5E-15 101.8 13.3 136 170-321 63-227 (261)
104 3rkv_A Putative peptidylprolyl 99.2 1.6E-10 5.6E-15 95.0 11.8 138 157-306 9-149 (162)
105 3ieg_A DNAJ homolog subfamily 99.2 3.7E-10 1.3E-14 102.5 15.3 132 162-321 6-152 (359)
106 3qww_A SET and MYND domain-con 99.2 3.8E-10 1.3E-14 109.0 16.1 101 220-320 309-413 (433)
107 1w3b_A UDP-N-acetylglucosamine 99.2 1.7E-10 5.7E-15 107.6 13.2 120 174-321 116-235 (388)
108 3cv0_A Peroxisome targeting si 99.2 1.5E-10 5E-15 104.1 11.8 126 174-321 187-318 (327)
109 4gcn_A Protein STI-1; structur 99.2 1.6E-09 5.3E-14 86.2 16.5 101 162-278 11-112 (127)
110 1fch_A Peroxisomal targeting s 99.2 1.1E-10 3.8E-15 107.3 11.2 127 173-321 231-362 (368)
111 2xpi_A Anaphase-promoting comp 99.2 5.5E-10 1.9E-14 109.7 16.8 107 209-321 475-582 (597)
112 2fbn_A 70 kDa peptidylprolyl i 99.2 2E-10 6.8E-15 97.7 11.9 147 157-315 36-183 (198)
113 4abn_A Tetratricopeptide repea 99.2 4.7E-11 1.6E-15 116.2 8.6 120 172-320 115-252 (474)
114 3u4t_A TPR repeat-containing p 99.2 1.9E-10 6.3E-15 101.4 11.8 128 172-321 121-253 (272)
115 1hh8_A P67PHOX, NCF-2, neutrop 99.2 2.8E-10 9.7E-15 96.9 12.1 98 208-320 5-102 (213)
116 2vyi_A SGTA protein; chaperone 99.2 4.7E-10 1.6E-14 86.7 12.3 111 167-305 20-130 (131)
117 2fo7_A Synthetic consensus TPR 99.1 4.3E-10 1.5E-14 87.0 11.7 98 211-320 3-100 (136)
118 2lni_A Stress-induced-phosphop 99.1 3.9E-10 1.3E-14 87.9 11.5 109 168-304 25-133 (133)
119 3ieg_A DNAJ homolog subfamily 99.1 1.4E-09 4.7E-14 98.7 16.6 136 174-321 203-338 (359)
120 2yhc_A BAMD, UPF0169 lipoprote 99.1 4.6E-10 1.6E-14 97.6 12.6 140 163-321 8-179 (225)
121 1kt0_A FKBP51, 51 kDa FK506-bi 99.1 4.3E-10 1.5E-14 109.1 12.9 144 159-315 268-412 (457)
122 2pzi_A Probable serine/threoni 99.1 1E-10 3.6E-15 118.9 8.9 119 174-321 406-532 (681)
123 4b4t_Q 26S proteasome regulato 99.1 1.9E-09 6.4E-14 101.7 17.0 142 169-320 65-206 (434)
124 2hr2_A Hypothetical protein; a 99.1 2.1E-09 7.1E-14 89.6 14.8 115 158-282 10-135 (159)
125 2xpi_A Anaphase-promoting comp 99.1 1.5E-09 5E-14 106.6 16.4 125 174-320 422-547 (597)
126 4g1t_A Interferon-induced prot 99.1 6.4E-10 2.2E-14 106.1 13.4 114 208-321 50-170 (472)
127 2l6j_A TPR repeat-containing p 99.1 2.9E-11 9.9E-16 92.0 2.9 101 208-314 3-103 (111)
128 3sz7_A HSC70 cochaperone (SGT) 99.1 6.7E-10 2.3E-14 91.4 11.5 97 161-279 13-109 (164)
129 1zu2_A Mitochondrial import re 99.1 8E-11 2.7E-15 98.1 5.5 89 221-321 14-123 (158)
130 2if4_A ATFKBP42; FKBP-like, al 99.1 1.6E-10 5.3E-15 107.7 8.1 108 207-320 177-295 (338)
131 4b4t_Q 26S proteasome regulato 99.1 3E-09 1E-13 100.2 17.1 155 166-320 11-166 (434)
132 3qwp_A SET and MYND domain-con 99.1 1.3E-09 4.6E-14 105.1 14.8 110 211-320 289-402 (429)
133 1ihg_A Cyclophilin 40; ppiase 99.1 9E-10 3.1E-14 104.1 13.2 140 160-311 224-363 (370)
134 3gyz_A Chaperone protein IPGC; 99.1 1.6E-09 5.5E-14 89.4 13.1 97 160-278 37-133 (151)
135 3qou_A Protein YBBN; thioredox 99.1 5.4E-10 1.8E-14 101.4 11.0 135 162-318 120-284 (287)
136 2y4t_A DNAJ homolog subfamily 99.1 2E-09 6.8E-14 101.7 15.2 136 174-321 226-361 (450)
137 3mkr_A Coatomer subunit epsilo 99.1 1.1E-09 3.8E-14 99.7 12.8 126 168-321 139-267 (291)
138 3fp2_A TPR repeat-containing p 99.1 1E-09 3.5E-14 106.0 13.2 126 174-321 359-494 (537)
139 2y4t_A DNAJ homolog subfamily 99.1 2.4E-09 8.3E-14 101.1 15.4 132 161-320 28-174 (450)
140 1wao_1 Serine/threonine protei 99.1 9E-11 3.1E-15 114.6 5.6 102 208-321 5-106 (477)
141 2r5s_A Uncharacterized protein 99.1 1E-09 3.6E-14 91.6 11.4 65 248-318 107-173 (176)
142 3fp2_A TPR repeat-containing p 99.0 1.6E-09 5.6E-14 104.5 13.7 102 208-321 309-410 (537)
143 1wao_1 Serine/threonine protei 99.0 1E-10 3.5E-15 114.1 4.6 113 173-313 20-134 (477)
144 2gw1_A Mitochondrial precursor 99.0 9.1E-10 3.1E-14 105.4 10.6 107 209-321 372-481 (514)
145 1na3_A Designed protein CTPR2; 99.0 2E-09 7E-14 78.7 10.2 84 208-303 8-91 (91)
146 2if4_A ATFKBP42; FKBP-like, al 99.0 2.4E-10 8.1E-15 106.5 5.9 149 161-321 181-331 (338)
147 2xcb_A PCRH, regulatory protei 99.0 1.9E-09 6.5E-14 86.8 10.4 96 163-280 22-117 (142)
148 1na0_A Designed protein CTPR3; 99.0 8.3E-09 2.8E-13 78.8 13.2 103 173-303 23-125 (125)
149 2kat_A Uncharacterized protein 99.0 1.5E-09 5.1E-14 83.9 8.8 82 227-320 3-84 (115)
150 2vgx_A Chaperone SYCD; alterna 99.0 1.7E-09 5.8E-14 88.4 9.5 97 162-280 24-120 (148)
151 1ouv_A Conserved hypothetical 99.0 1.1E-08 3.8E-13 90.7 15.3 111 174-318 57-179 (273)
152 2yhc_A BAMD, UPF0169 lipoprote 99.0 4.5E-09 1.5E-13 91.3 12.4 107 209-321 4-128 (225)
153 1elw_A TPR1-domain of HOP; HOP 99.0 7.9E-09 2.7E-13 78.3 11.9 108 164-299 9-116 (118)
154 3q49_B STIP1 homology and U bo 99.0 5.4E-09 1.9E-13 82.4 11.0 114 166-302 16-129 (137)
155 1elr_A TPR2A-domain of HOP; HO 98.9 1.8E-08 6.1E-13 77.7 13.7 113 168-303 13-126 (131)
156 3qwp_A SET and MYND domain-con 98.9 1.8E-08 6.3E-13 97.1 16.6 133 162-303 290-427 (429)
157 4g1t_A Interferon-induced prot 98.9 4.9E-09 1.7E-13 99.9 12.2 138 171-321 63-207 (472)
158 3k9i_A BH0479 protein; putativ 98.9 1.8E-09 6E-14 84.1 7.4 86 174-278 5-90 (117)
159 2gw1_A Mitochondrial precursor 98.9 9.4E-09 3.2E-13 98.3 13.1 101 207-320 4-104 (514)
160 2dba_A Smooth muscle cell asso 98.9 1.3E-08 4.4E-13 80.8 11.7 107 170-301 39-145 (148)
161 3mkr_A Coatomer subunit epsilo 98.9 1.3E-08 4.5E-13 92.5 13.1 102 208-321 129-232 (291)
162 2xev_A YBGF; tetratricopeptide 98.9 2.2E-08 7.5E-13 78.0 12.5 114 168-303 11-124 (129)
163 1zu2_A Mitochondrial import re 98.9 4.6E-09 1.6E-13 87.4 8.7 84 173-278 16-120 (158)
164 3qou_A Protein YBBN; thioredox 98.9 7.9E-09 2.7E-13 93.6 11.0 65 208-278 218-284 (287)
165 2c2l_A CHIP, carboxy terminus 98.9 2.5E-09 8.7E-14 96.6 7.4 98 163-282 8-105 (281)
166 1hxi_A PEX5, peroxisome target 98.9 5.4E-09 1.8E-13 82.4 8.2 87 170-278 28-114 (121)
167 2kat_A Uncharacterized protein 98.9 2.6E-08 9E-13 76.7 11.7 85 178-284 4-88 (115)
168 3rjv_A Putative SEL1 repeat pr 98.9 2.3E-08 8E-13 86.3 12.3 98 210-318 86-197 (212)
169 3ma5_A Tetratricopeptide repea 98.8 1.2E-08 3.9E-13 77.5 9.0 67 248-320 6-72 (100)
170 1ouv_A Conserved hypothetical 98.8 2.3E-08 8E-13 88.6 12.5 93 210-318 39-143 (273)
171 2r5s_A Uncharacterized protein 98.8 1.5E-08 5.1E-13 84.4 10.3 104 211-320 8-139 (176)
172 2kc7_A BFR218_protein; tetratr 98.8 6.8E-09 2.3E-13 77.7 6.7 88 213-320 4-92 (99)
173 3qww_A SET and MYND domain-con 98.8 1E-07 3.5E-12 91.9 16.7 114 174-296 313-431 (433)
174 1klx_A Cysteine rich protein B 98.8 5.3E-08 1.8E-12 78.6 12.0 109 174-318 10-126 (138)
175 3ma5_A Tetratricopeptide repea 98.8 4.8E-08 1.6E-12 74.0 10.5 71 208-284 6-76 (100)
176 2ond_A Cleavage stimulation fa 98.8 3.4E-08 1.2E-12 89.9 10.6 96 211-318 136-232 (308)
177 2ond_A Cleavage stimulation fa 98.8 2.6E-08 9.1E-13 90.6 9.7 114 176-317 33-162 (308)
178 4f3v_A ESX-1 secretion system 98.7 1.2E-07 4.3E-12 86.1 13.8 123 173-320 116-239 (282)
179 2e2e_A Formate-dependent nitri 98.7 1.2E-08 4.2E-13 84.5 6.0 91 219-321 20-113 (177)
180 1na3_A Designed protein CTPR2; 98.7 7E-08 2.4E-12 70.3 9.4 68 248-321 8-75 (91)
181 2l6j_A TPR repeat-containing p 98.7 4.7E-08 1.6E-12 73.9 8.6 68 248-321 3-70 (111)
182 3rjv_A Putative SEL1 repeat pr 98.7 7.2E-08 2.5E-12 83.2 10.7 114 172-318 31-158 (212)
183 1dce_A Protein (RAB geranylger 98.6 4.7E-07 1.6E-11 90.2 12.8 118 175-320 45-175 (567)
184 2v5f_A Prolyl 4-hydroxylase su 98.5 1.1E-06 3.8E-11 67.3 11.1 83 209-297 5-88 (104)
185 2xm6_A Protein corresponding t 98.5 8.8E-07 3E-11 85.6 12.9 94 210-319 329-433 (490)
186 2kc7_A BFR218_protein; tetratr 98.5 5.5E-07 1.9E-11 67.0 8.5 64 252-321 3-67 (99)
187 2v5f_A Prolyl 4-hydroxylase su 98.5 1.6E-06 5.3E-11 66.4 10.8 73 249-321 5-78 (104)
188 1dce_A Protein (RAB geranylger 98.4 9.9E-07 3.4E-11 87.9 11.5 121 174-322 88-225 (567)
189 2xm6_A Protein corresponding t 98.4 2.8E-06 9.6E-11 82.0 13.5 91 211-317 113-215 (490)
190 3dra_A Protein farnesyltransfe 98.4 3.4E-06 1.1E-10 77.6 12.8 119 174-320 48-177 (306)
191 2kck_A TPR repeat; tetratricop 98.3 9.4E-07 3.2E-11 66.0 6.7 67 249-321 6-72 (112)
192 2ooe_A Cleavage stimulation fa 98.3 1.9E-06 6.6E-11 84.0 10.6 115 177-318 304-454 (530)
193 3e4b_A ALGK; tetratricopeptide 98.3 2.7E-06 9.4E-11 81.9 9.8 90 210-317 249-350 (452)
194 2ooe_A Cleavage stimulation fa 98.2 3.1E-06 1.1E-10 82.6 9.5 114 177-318 256-385 (530)
195 3dss_A Geranylgeranyl transfer 98.2 2.9E-05 9.8E-10 72.1 14.4 118 176-321 47-177 (331)
196 4f3v_A ESX-1 secretion system 98.2 2.5E-06 8.6E-11 77.5 7.0 132 174-317 62-199 (282)
197 3dss_A Geranylgeranyl transfer 98.2 4.3E-05 1.5E-09 70.9 15.2 120 175-322 90-226 (331)
198 3dra_A Protein farnesyltransfe 98.1 1.4E-05 4.8E-10 73.4 11.3 120 174-321 84-218 (306)
199 3q7a_A Farnesyltransferase alp 98.1 9.9E-06 3.4E-10 75.7 9.4 119 174-320 69-198 (349)
200 3e4b_A ALGK; tetratricopeptide 98.1 1.2E-05 4E-10 77.5 10.1 86 213-316 217-314 (452)
201 3ly7_A Transcriptional activat 98.1 4.2E-05 1.5E-09 71.8 13.1 124 174-320 214-341 (372)
202 3ffl_A Anaphase-promoting comp 98.0 0.00012 4.2E-09 60.7 14.1 107 208-314 19-147 (167)
203 1xi4_A Clathrin heavy chain; a 98.0 7.1E-05 2.4E-09 80.6 15.0 96 209-316 1105-1222(1630)
204 1pc2_A Mitochondria fission pr 98.0 3.1E-05 1.1E-09 63.6 9.7 67 248-320 31-102 (152)
205 3bee_A Putative YFRE protein; 98.0 2.5E-05 8.6E-10 58.7 8.0 67 248-320 5-74 (93)
206 3q7a_A Farnesyltransferase alp 97.9 3E-05 1E-09 72.5 8.3 120 175-322 105-241 (349)
207 1pc2_A Mitochondria fission pr 97.9 0.00014 4.7E-09 59.7 11.2 77 208-295 31-111 (152)
208 1klx_A Cysteine rich protein B 97.8 3.1E-05 1.1E-09 62.0 6.5 78 223-318 9-90 (138)
209 3bee_A Putative YFRE protein; 97.7 8E-05 2.7E-09 55.9 7.3 64 209-278 6-72 (93)
210 3txn_A 26S proteasome regulato 97.7 0.0027 9.2E-08 60.1 19.4 108 212-319 102-211 (394)
211 1xi4_A Clathrin heavy chain; a 97.7 0.00099 3.4E-08 71.9 16.6 95 209-317 1134-1249(1630)
212 3mv2_B Coatomer subunit epsilo 97.7 0.00064 2.2E-08 62.4 13.4 121 173-318 114-240 (310)
213 3u64_A Protein TP_0956; tetrat 97.6 0.00021 7.2E-09 64.8 9.2 102 208-319 151-270 (301)
214 3mv2_B Coatomer subunit epsilo 97.5 0.0031 1.1E-07 57.7 15.8 105 208-321 175-285 (310)
215 1b89_A Protein (clathrin heavy 97.3 0.00014 4.6E-09 70.0 4.6 94 211-318 124-236 (449)
216 3ffl_A Anaphase-promoting comp 97.1 0.0097 3.3E-07 49.2 12.5 124 162-299 23-165 (167)
217 1b89_A Protein (clathrin heavy 97.0 0.00014 4.7E-09 70.0 1.0 81 211-317 96-176 (449)
218 3u64_A Protein TP_0956; tetrat 96.9 0.003 1E-07 57.2 8.4 74 201-280 191-271 (301)
219 3ly7_A Transcriptional activat 96.8 0.0033 1.1E-07 59.0 8.7 106 208-319 195-307 (372)
220 4b4t_P 26S proteasome regulato 96.8 0.05 1.7E-06 52.2 16.5 113 207-319 135-248 (445)
221 1nzn_A CGI-135 protein, fissio 96.5 0.012 3.9E-07 46.6 8.6 68 248-320 34-105 (126)
222 1nzn_A CGI-135 protein, fissio 96.5 0.043 1.5E-06 43.3 11.6 75 209-293 35-112 (126)
223 3txn_A 26S proteasome regulato 96.5 0.26 8.8E-06 46.5 19.0 98 222-319 72-169 (394)
224 4b4t_R RPN7, 26S proteasome re 96.3 0.022 7.5E-07 54.4 11.0 105 211-318 133-237 (429)
225 4e6h_A MRNA 3'-END-processing 95.4 0.11 3.8E-06 52.5 11.9 104 209-318 343-463 (679)
226 2ff4_A Probable regulatory pro 94.6 0.6 2.1E-05 43.6 13.9 106 209-320 115-236 (388)
227 4e6h_A MRNA 3'-END-processing 94.5 0.3 1E-05 49.3 12.3 101 213-322 473-574 (679)
228 3o48_A Mitochondria fission 1 94.5 0.32 1.1E-05 38.6 9.8 66 249-319 40-108 (134)
229 1ya0_A SMG-7 transcript varian 94.4 0.11 3.6E-06 50.7 8.3 79 211-301 154-232 (497)
230 1y8m_A FIS1; mitochondria, unk 94.3 0.46 1.6E-05 38.2 10.4 68 248-320 38-108 (144)
231 4g26_A Pentatricopeptide repea 94.1 0.37 1.3E-05 46.7 11.6 99 209-317 105-203 (501)
232 3o48_A Mitochondria fission 1 93.8 0.54 1.8E-05 37.3 9.8 74 209-293 40-116 (134)
233 1ya0_A SMG-7 transcript varian 93.7 0.17 5.9E-06 49.2 8.3 64 249-318 152-215 (497)
234 4h7y_A Dual specificity protei 93.6 0.7 2.4E-05 37.6 10.2 103 211-320 15-125 (161)
235 4gns_B Protein CSD3, chitin bi 93.4 0.6 2.1E-05 47.6 12.0 58 251-314 339-396 (754)
236 2wpv_A GET4, UPF0363 protein Y 93.3 2.4 8.4E-05 38.4 14.8 102 211-313 55-158 (312)
237 1y8m_A FIS1; mitochondria, unk 93.3 0.61 2.1E-05 37.4 9.5 65 209-278 39-106 (144)
238 3lpz_A GET4 (YOR164C homolog); 93.1 2.6 8.9E-05 38.6 14.6 101 211-312 57-159 (336)
239 3kae_A CDC27, possible protein 92.6 2.5 8.4E-05 35.2 12.3 95 213-318 37-143 (242)
240 4b4t_P 26S proteasome regulato 92.4 7.6 0.00026 36.8 18.7 85 202-286 170-255 (445)
241 2uy1_A Cleavage stimulation fa 92.0 1.8 6.3E-05 41.6 12.9 104 209-320 213-351 (493)
242 3mkq_A Coatomer beta'-subunit; 91.3 6.6 0.00023 39.1 16.6 96 210-306 682-800 (814)
243 2ff4_A Probable regulatory pro 89.3 2.7 9.3E-05 39.1 11.0 107 174-287 130-244 (388)
244 4g26_A Pentatricopeptide repea 88.8 3 0.0001 40.2 11.3 84 224-317 85-168 (501)
245 4b4t_S RPN3, 26S proteasome re 88.2 0.45 1.6E-05 46.3 4.8 110 210-320 182-301 (523)
246 4gns_B Protein CSD3, chitin bi 84.0 2.7 9.2E-05 42.9 8.2 59 211-275 339-397 (754)
247 4b4t_R RPN7, 26S proteasome re 83.7 14 0.00049 34.6 12.8 92 174-278 146-237 (429)
248 4h7y_A Dual specificity protei 83.5 4.9 0.00017 32.6 7.9 87 178-279 38-124 (161)
249 3kae_A CDC27, possible protein 83.3 18 0.0006 30.1 11.3 70 209-278 62-143 (242)
250 3mkq_A Coatomer beta'-subunit; 82.6 13 0.00046 36.8 12.8 45 220-275 663-707 (814)
251 3spa_A Mtrpol, DNA-directed RN 82.2 9.7 0.00033 40.3 11.6 100 210-317 128-229 (1134)
252 3mkq_B Coatomer subunit alpha; 80.5 23 0.00078 29.2 11.7 26 250-275 35-60 (177)
253 2uy1_A Cleavage stimulation fa 80.1 3.9 0.00013 39.3 7.5 91 212-315 289-380 (493)
254 4fhn_B Nucleoporin NUP120; pro 79.2 5.5 0.00019 42.4 8.9 101 211-312 844-961 (1139)
255 4b4t_S RPN3, 26S proteasome re 75.4 5.1 0.00017 39.0 6.6 73 205-279 227-300 (523)
256 4b4t_O 26S proteasome regulato 75.3 36 0.0012 31.5 12.4 102 217-318 84-198 (393)
257 4gq2_M Nucleoporin NUP120; bet 74.5 21 0.00072 37.2 11.6 71 251-321 842-929 (950)
258 4a5x_A MITD1, MIT domain-conta 72.7 8.3 0.00028 27.8 5.7 38 203-240 10-47 (86)
259 1zbp_A Hypothetical protein VP 70.1 37 0.0013 30.0 10.4 97 218-320 6-131 (273)
260 2rpa_A Katanin P60 ATPase-cont 70.1 3.9 0.00013 29.1 3.3 27 252-278 15-41 (78)
261 4fhn_B Nucleoporin NUP120; pro 67.6 21 0.00071 38.0 9.9 71 251-321 844-931 (1139)
262 2crb_A Nuclear receptor bindin 67.3 20 0.00067 26.3 6.6 30 249-278 15-44 (97)
263 3re2_A Predicted protein; meni 66.7 31 0.0011 31.9 9.3 85 234-319 240-326 (472)
264 2w2u_A Hypothetical P60 katani 65.9 12 0.00039 26.9 5.2 28 251-278 21-48 (83)
265 4gq2_M Nucleoporin NUP120; bet 65.1 36 0.0012 35.4 10.9 87 211-298 842-945 (950)
266 2w2u_A Hypothetical P60 katani 63.9 16 0.00055 26.1 5.7 34 207-240 17-50 (83)
267 2ijq_A Hypothetical protein; s 63.4 21 0.00073 28.9 7.0 77 208-284 31-110 (161)
268 2v6y_A AAA family ATPase, P60 63.2 14 0.00047 26.4 5.2 27 252-278 14-40 (83)
269 1rij_A E6APN1 peptide; Trp-CAG 62.6 2.1 7E-05 22.8 0.5 12 12-23 13-24 (26)
270 2crb_A Nuclear receptor bindin 61.5 16 0.00055 26.8 5.2 34 287-320 13-46 (97)
271 3u84_A Menin; MLL, JUND, ledgf 61.2 42 0.0015 31.6 9.2 50 268-318 298-347 (550)
272 1qsa_A Protein (soluble lytic 60.7 19 0.00066 35.7 7.5 92 213-317 256-347 (618)
273 2v6y_A AAA family ATPase, P60 60.7 20 0.00068 25.5 5.7 33 208-240 10-42 (83)
274 1zbp_A Hypothetical protein VP 60.5 17 0.00059 32.1 6.4 57 258-320 6-62 (273)
275 4gq4_A Menin; tumor suppressor 60.4 37 0.0013 31.9 8.8 71 248-319 261-333 (489)
276 2rpa_A Katanin P60 ATPase-cont 60.0 14 0.00048 26.2 4.6 34 208-241 11-44 (78)
277 2cwy_A Hypothetical protein TT 59.1 21 0.00073 26.0 5.8 69 214-284 6-74 (94)
278 4a5x_A MITD1, MIT domain-conta 58.3 16 0.00056 26.2 4.9 31 248-278 15-45 (86)
279 1wfd_A Hypothetical protein 15 56.7 26 0.0009 25.4 5.9 37 204-240 10-46 (93)
280 3re2_A Predicted protein; meni 56.3 23 0.0008 32.7 6.5 66 227-294 275-341 (472)
281 1wfd_A Hypothetical protein 15 55.0 22 0.00076 25.8 5.2 31 248-278 14-44 (93)
282 3u84_A Menin; MLL, JUND, ledgf 54.7 25 0.00085 33.2 6.5 66 227-294 297-363 (550)
283 2v6x_A Vacuolar protein sortin 53.8 33 0.0011 24.3 5.9 35 206-240 10-44 (85)
284 2v6x_A Vacuolar protein sortin 52.2 27 0.00092 24.7 5.2 33 246-278 10-42 (85)
285 2dl1_A Spartin; SPG20, MIT, st 50.8 37 0.0013 25.9 5.9 17 224-240 18-34 (116)
286 2cpt_A SKD1 protein, vacuolar 50.7 36 0.0012 25.9 6.0 35 206-240 15-49 (117)
287 3t5x_A PCI domain-containing p 50.1 67 0.0023 26.7 8.2 61 204-265 9-69 (203)
288 2cpt_A SKD1 protein, vacuolar 49.4 25 0.00084 26.9 4.9 32 247-278 16-47 (117)
289 3mkq_B Coatomer subunit alpha; 48.9 40 0.0014 27.7 6.4 47 259-316 15-61 (177)
290 2vkj_A TM1634; membrane protei 47.6 78 0.0027 23.0 6.8 50 207-259 51-100 (106)
291 3t5v_B Nuclear mRNA export pro 46.7 1.2E+02 0.0041 28.7 10.2 70 211-281 178-253 (455)
292 2o8p_A 14-3-3 domain containin 46.5 87 0.003 26.8 8.3 58 262-319 138-198 (227)
293 2cwy_A Hypothetical protein TT 45.8 34 0.0012 24.9 5.0 65 254-320 6-70 (94)
294 2wpv_A GET4, UPF0363 protein Y 45.5 1.7E+02 0.0057 26.2 11.2 91 229-319 113-218 (312)
295 4gq4_A Menin; tumor suppressor 44.6 37 0.0013 32.0 6.0 67 227-295 282-349 (489)
296 4b4t_O 26S proteasome regulato 43.7 1.5E+02 0.0051 27.2 10.3 72 208-279 126-199 (393)
297 2wm9_A Dedicator of cytokinesi 42.8 1.8E+02 0.006 27.2 10.7 91 211-301 13-140 (428)
298 2dl1_A Spartin; SPG20, MIT, st 42.7 34 0.0012 26.1 4.6 16 303-318 36-51 (116)
299 3t5v_B Nuclear mRNA export pro 42.3 95 0.0032 29.4 8.8 67 251-318 178-249 (455)
300 2ijq_A Hypothetical protein; s 41.4 35 0.0012 27.6 4.8 68 253-320 36-106 (161)
301 2yin_A DOCK2, dedicator of cyt 39.8 2.4E+02 0.0082 26.4 12.1 91 211-301 37-145 (436)
302 3snx_A SUSD homolog, putative 38.1 50 0.0017 31.2 6.1 33 285-317 187-219 (460)
303 3lew_A SUSD-like carbohydrate 36.9 60 0.002 30.9 6.5 33 285-317 199-231 (495)
304 3t5x_A PCI domain-containing p 36.8 90 0.0031 25.9 6.9 33 248-280 13-45 (203)
305 3ax2_A Mitochondrial import re 35.1 51 0.0017 22.9 4.2 31 211-241 19-49 (73)
306 3spa_A Mtrpol, DNA-directed RN 34.1 1.5E+02 0.0051 31.5 9.2 68 248-317 126-193 (1134)
307 1wy6_A Hypothetical protein ST 33.8 1.2E+02 0.004 24.3 6.5 33 285-317 121-153 (172)
308 1zb1_A BRO1 protein; AIP1, BRO 33.6 1.9E+02 0.0067 26.4 9.3 115 207-321 121-289 (392)
309 3myv_A SUSD superfamily protei 33.0 69 0.0024 30.0 6.2 33 285-317 186-218 (454)
310 2br9_A 14-3-3E, 14-3-3 protein 32.9 2.3E+02 0.0079 24.2 10.7 53 265-317 146-201 (234)
311 1om2_A Protein (mitochondrial 32.6 82 0.0028 23.1 5.2 31 211-241 22-52 (95)
312 2vkj_A TM1634; membrane protei 32.5 1.4E+02 0.0049 21.6 6.5 49 248-300 52-101 (106)
313 3ubw_A 14-3-3E, 14-3-3 protein 32.0 2.5E+02 0.0087 24.4 10.6 53 265-317 172-227 (261)
314 2r17_C Vacuolar protein sortin 31.7 2.7E+02 0.0094 24.6 15.1 110 211-320 101-226 (298)
315 3ax2_A Mitochondrial import re 31.3 55 0.0019 22.7 3.9 24 254-277 22-45 (73)
316 3kez_A Putative sugar binding 31.1 70 0.0024 30.0 5.9 33 285-317 192-224 (461)
317 1om2_A Protein (mitochondrial 28.7 67 0.0023 23.5 4.1 28 253-280 24-51 (95)
318 1qsa_A Protein (soluble lytic 28.5 75 0.0026 31.4 5.8 94 218-317 294-409 (618)
319 3uzd_A 14-3-3 protein gamma; s 27.5 3E+02 0.01 23.7 10.6 53 265-317 147-202 (248)
320 3eab_A Spastin; spastin, MIT, 27.2 43 0.0015 24.3 2.7 17 264-280 12-28 (89)
321 2wvi_A Mitotic checkpoint seri 26.9 1.4E+02 0.0048 24.0 6.2 80 229-318 43-125 (164)
322 4a1g_A Mitotic checkpoint seri 26.3 1.3E+02 0.0046 23.9 5.9 80 229-318 48-130 (152)
323 1h7d_A Aminolevulinic acid syn 26.1 24 0.00081 22.7 1.0 15 1-15 4-18 (49)
324 3hdx_A SUSD homolog, SUSD supe 26.0 1.1E+02 0.0038 28.8 6.3 34 285-318 193-226 (478)
325 1o9d_A 14-3-3-like protein C; 25.8 3.3E+02 0.011 23.6 10.7 53 265-317 151-206 (260)
326 3mcx_A SUSD superfamily protei 25.2 79 0.0027 29.8 5.1 33 285-317 198-230 (477)
327 3iqu_A 14-3-3 protein sigma; s 24.1 3.4E+02 0.012 23.2 9.7 53 265-317 149-204 (236)
328 3qnk_A Putative lipoprotein; a 23.7 1.2E+02 0.004 29.0 6.1 31 287-317 180-210 (517)
329 3r9m_A BRO1 domain-containing 23.4 2.4E+02 0.0082 25.7 7.9 33 248-280 252-284 (376)
330 4aez_C MAD3, mitotic spindle c 23.4 1.7E+02 0.0057 24.9 6.2 80 229-318 97-179 (223)
331 3i4g_A SUSD-like carbohydrate 21.2 1.6E+02 0.0054 28.2 6.4 33 285-317 194-226 (528)
332 3lew_A SUSD-like carbohydrate 20.4 1.4E+02 0.0048 28.2 5.9 31 248-278 202-232 (495)
333 3myv_A SUSD superfamily protei 20.4 1.5E+02 0.0053 27.5 6.1 33 248-280 189-221 (454)
334 2wb7_A PT26-6P; extra chromoso 20.3 88 0.003 30.0 4.2 40 266-305 449-490 (526)
No 1
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.65 E-value=2.5e-14 Score=115.15 Aligned_cols=139 Identities=23% Similarity=0.298 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHH
Q 020735 173 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAA 252 (322)
Q Consensus 173 l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~ 252 (322)
.+.+.++..+++++...+. .++....+.++..+|.+|...|++++|+.++++++++.+..++......++
T Consensus 23 ~~~~~A~~~~~~al~~~~~----------~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 92 (164)
T 3ro3_A 23 GNFRDAVIAHEQRLLIAKE----------FGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSC 92 (164)
T ss_dssp TCHHHHHHHHHHHHHHHHH----------HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHH----------hCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHH
Confidence 3677888888888888765 445555677899999999999999999999999999999999998889999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 253 RGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 253 ~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
.++|.++...|++++|++++++++++.+..++.+..+.++.++|.+|...|++++|.+++++++++.++
T Consensus 93 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 93 YSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998888888999999999999999999999999999998764
No 2
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.63 E-value=4.8e-15 Score=118.65 Aligned_cols=103 Identities=16% Similarity=0.252 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCc
Q 020735 207 EELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYS 286 (322)
Q Consensus 207 ~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~ 286 (322)
..+..+.++|..|+..|+|++|++.|++++++.|. ...+++++|.+|..+|++++|+..|++++++ +|
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p 78 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE------NAILYSNRAACLTKLMEFQRALDDCDTCIRL------DS 78 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHhhHHHhhccHHHHHHHHHHHHHh------hh
Confidence 46788899999999999999999999999999988 7889999999999999999999999999999 88
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 287 GSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 287 ~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
..+.+|+++|.+|..+|++++|+++|++++++.++
T Consensus 79 ~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~ 113 (126)
T 4gco_A 79 KFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPS 113 (126)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcC
Confidence 88999999999999999999999999999998765
No 3
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.62 E-value=1.8e-15 Score=125.59 Aligned_cols=104 Identities=13% Similarity=0.120 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCC
Q 020735 206 KEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEY 285 (322)
Q Consensus 206 ~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~ 285 (322)
.....+++.+|..++..|++++|+..|++++++.|. ...+++++|.++..+|+|++|+++|++++++ +
T Consensus 33 p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~------~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l------~ 100 (151)
T 3gyz_A 33 DDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY------NVDYIMGLAAIYQIKEQFQQAADLYAVAFAL------G 100 (151)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------S
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHHccHHHHHHHHHHHHhh------C
Confidence 337889999999999999999999999999999998 8889999999999999999999999999999 8
Q ss_pred chHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 286 SGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 286 ~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
|..+.+++++|.+|..+|++++|+.+|++++++.++
T Consensus 101 P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~ 136 (151)
T 3gyz_A 101 KNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSND 136 (151)
T ss_dssp SSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 888899999999999999999999999999987653
No 4
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.60 E-value=7.9e-14 Score=126.88 Aligned_cols=139 Identities=15% Similarity=0.119 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHH
Q 020735 172 ALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKA 251 (322)
Q Consensus 172 ~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a 251 (322)
..+.+.+++.|.+++...+. .++....+.++.++|.+|...|++++|+.+|++++++.+..++....+.+
T Consensus 50 ~g~~~~A~~~~~~al~~~~~----------~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~ 119 (292)
T 1qqe_A 50 RKELNLAGDSFLKAADYQKK----------AGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANF 119 (292)
T ss_dssp TTCTHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHH----------hCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 34778999999999998766 45555668899999999999999999999999999999999999888999
Q ss_pred HHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 252 ARGLGASLQRQ-GKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 252 ~~~LG~~~~~~-gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
+.++|.+|... |++++|+.+|++++++.+..++....+.++.++|.+|..+|++++|+.+|++++++.+
T Consensus 120 ~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~ 189 (292)
T 1qqe_A 120 KFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSM 189 (292)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 99999999996 9999999999999999887776666678899999999999999999999999998764
No 5
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.60 E-value=1.8e-14 Score=115.28 Aligned_cols=108 Identities=16% Similarity=0.342 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC-CC
Q 020735 207 EELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREG-EY 285 (322)
Q Consensus 207 ~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~-d~ 285 (322)
..+.++.++|..++..|+|++|+.+|++++++.|. ...+++++|.+|..+|+|++|++++++++++.+... +.
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~------~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 79 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS------NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADY 79 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhh
Confidence 45678889999999999999999999999999988 788999999999999999999999999999977654 33
Q ss_pred chHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 286 SGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 286 ~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
...+.++.++|.+|..+|++++|+++|+++++..+
T Consensus 80 ~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~ 114 (127)
T 4gcn_A 80 KLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFR 114 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCc
Confidence 45678999999999999999999999999998643
No 6
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.59 E-value=6.8e-14 Score=126.99 Aligned_cols=137 Identities=15% Similarity=0.110 Sum_probs=122.0
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC-CChHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV-KDPIEEKKAA 252 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~-~d~~~~~~a~ 252 (322)
+.+.++..|++++..... ..+....+.++.++|.+|...|++++|+.+|+++++..+.. .+......++
T Consensus 130 ~~~~Ai~~~~~al~~~~~----------~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 199 (293)
T 3u3w_A 130 DYEYCILELKKLLNQQLT----------GIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVR 199 (293)
T ss_dssp CHHHHHHHHHHHHHTCCC----------CSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcc----------cccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHH
Confidence 558888899999986544 22333466789999999999999999999999999999887 6777788899
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhhh
Q 020735 253 RGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELG-DLERAARFYDKYISRLE 320 (322)
Q Consensus 253 ~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~g-d~e~A~~~~~kAl~i~e 320 (322)
+++|.+|..+|+|++|++++++++++.+..++....+.+++++|.+|..+| ++++|.++|++|+.+++
T Consensus 200 ~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~ 268 (293)
T 3u3w_A 200 YNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFD 268 (293)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999888889999999999999999 57999999999999875
No 7
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.59 E-value=8.1e-15 Score=120.61 Aligned_cols=120 Identities=12% Similarity=0.102 Sum_probs=107.8
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 253 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~ 253 (322)
+.+.+++.+++++...|. ....++.+|.+|+..|+|++|+++|++++++.|. ...+++
T Consensus 12 ~~e~ai~~~~~a~~~~p~----------------~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~------~~~a~~ 69 (150)
T 4ga2_A 12 DVERYIASVQGSTPSPRQ----------------KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQER------DPKAHR 69 (150)
T ss_dssp HHHHHHHHHHHHSCSHHH----------------HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHH
T ss_pred hHHHHHHHHHHhcccCcc----------------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHH
Confidence 556777788888776655 6667889999999999999999999999999998 889999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHH-HHHHHHhhhc
Q 020735 254 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARF-YDKYISRLES 321 (322)
Q Consensus 254 ~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~-~~kAl~i~e~ 321 (322)
++|.+|...|++++|+.+|++++++ +|..+.+++++|.+|...|++++|.+. +++++++.++
T Consensus 70 ~lg~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~ 132 (150)
T 4ga2_A 70 FLGLLYELEENTDKAVECYRRSVEL------NPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPG 132 (150)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHcCchHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcC
Confidence 9999999999999999999999999 888899999999999999999887765 5999988764
No 8
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.59 E-value=2e-13 Score=115.26 Aligned_cols=139 Identities=13% Similarity=0.067 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCC-hHHHHHH
Q 020735 173 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKD-PIEEKKA 251 (322)
Q Consensus 173 l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d-~~~~~~a 251 (322)
.+.+.++..+++++..... .++....+.++.++|.+|...|++++|+.++++++++.+..++ ......+
T Consensus 40 g~~~~A~~~~~~al~~~~~----------~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 109 (203)
T 3gw4_A 40 DRFDEARASFQALQQQAQK----------SGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASAN 109 (203)
T ss_dssp TCHHHHHHHHHHHHHHHHT----------TCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHH----------cCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHH
Confidence 3677888889999988766 4566667889999999999999999999999999999999884 4578889
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 252 ARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 252 ~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
+.++|.++...|++++|+.++++++++.+..++....+.++.++|.+|...|++++|..++++++++.++
T Consensus 110 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 179 (203)
T 3gw4_A 110 AYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAE 179 (203)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988888788889999999999999999999999999998753
No 9
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.57 E-value=2.9e-13 Score=126.90 Aligned_cols=140 Identities=18% Similarity=0.232 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHHhHhhhcccCCCCCccccccCC-cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHH
Q 020735 171 AALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDP-KKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEK 249 (322)
Q Consensus 171 ~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~-~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~ 249 (322)
...+.+.++..+.+++...+. .++ ....+.++.++|.+|...|++++|+++|++++++.+..++....+
T Consensus 155 ~~~~~~~A~~~~~~al~~~~~----------~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 224 (383)
T 3ulq_A 155 YMKQTYFSMDYARQAYEIYKE----------HEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMG 224 (383)
T ss_dssp HTTCHHHHHHHHHHHHHHHHT----------CSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHh----------CccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHH
Confidence 333778999999999998876 333 556788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 250 KAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 250 ~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
.++.++|.+|..+|++++|++++++++++.+..++.+..+.++.++|.+|..+|++++|..++++++++.+
T Consensus 225 ~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 225 RTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998887688899999999999999999999999999998864
No 10
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.57 E-value=2.6e-13 Score=127.28 Aligned_cols=139 Identities=14% Similarity=0.124 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCC-hHHHHH
Q 020735 172 ALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKD-PIEEKK 250 (322)
Q Consensus 172 ~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d-~~~~~~ 250 (322)
..+.+.++..|++++..... .++....+.+++.+|.+|...|++++|+.++++++++.+..++ ....+.
T Consensus 116 ~g~~~~A~~~~~~al~~~~~----------~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 185 (383)
T 3ulq_A 116 QREYLSAIKFFKKAESKLIF----------VKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQ 185 (383)
T ss_dssp TTCHHHHHHHHHHHHTTGGG----------CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHhh----------CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHH
Confidence 34678889999999988765 4556668889999999999999999999999999999999887 777889
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 251 AARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 251 a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
++.++|.+|...|++++|+++|++++++.++.++.+..+.++.++|.+|..+|++++|+.+|++++++.+
T Consensus 186 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 255 (383)
T 3ulq_A 186 CHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFE 255 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998888999999999999999999999999999999754
No 11
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.56 E-value=4.3e-14 Score=144.89 Aligned_cols=99 Identities=19% Similarity=0.238 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchH
Q 020735 209 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGS 288 (322)
Q Consensus 209 a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~ 288 (322)
+.+++++|.+|..+|++++|++.|++++++.++ ...+++++|.+|..+|++++|+++|++++++ +|..
T Consensus 77 ~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~------~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l------~P~~ 144 (723)
T 4gyw_A 77 ADAYSNMGNTLKEMQDVQGALQCYTRAIQINPA------FADAHSNLASIHKDSGNIPEAIASYRTALKL------KPDF 144 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CSCC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCC
Confidence 344444555555555555555555555554444 4444555555555555555555555555544 4444
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 020735 289 TEAYGAIADCYTELGDLERAARFYDKYISRL 319 (322)
Q Consensus 289 a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~ 319 (322)
+.++.++|.+|..+|++++|.+.|++++++.
T Consensus 145 ~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~ 175 (723)
T 4gyw_A 145 PDAYCNLAHCLQIVCDWTDYDERMKKLVSIV 175 (723)
T ss_dssp HHHHHHHHHHHHHTTCCTTHHHHHHHHHHHH
T ss_pred hHHHhhhhhHHHhcccHHHHHHHHHHHHHhC
Confidence 4455555555555555555555555554443
No 12
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.56 E-value=1.7e-13 Score=125.55 Aligned_cols=131 Identities=14% Similarity=0.041 Sum_probs=89.2
Q ss_pred HHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHH
Q 020735 175 RQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARG 254 (322)
Q Consensus 175 ~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~ 254 (322)
.+.++..|++++...+. .++....+.++.++|.+|.. |++++|+.+|++++++.+..++......++.+
T Consensus 92 ~~~A~~~~~~Al~l~~~----------~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~ 160 (307)
T 2ifu_A 92 MPEAVQYIEKASVMYVE----------NGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGK 160 (307)
T ss_dssp GGGGHHHHHHHHHHHHT----------TTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH----------cCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHH
Confidence 35555666666665554 55555556666777777766 77777777777777777776666666667777
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 020735 255 LGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYI 316 (322)
Q Consensus 255 LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl 316 (322)
+|.+|..+|+|++|+.+|++++++.++.++.+....++.++|.++..+|++++|..+|++++
T Consensus 161 lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 161 ASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 77777777777777777777777766666555555667777777777777777777777776
No 13
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.55 E-value=2.5e-13 Score=123.27 Aligned_cols=137 Identities=17% Similarity=0.128 Sum_probs=118.4
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHH-HHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIE-EKKAA 252 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~-~~~a~ 252 (322)
+.+.++..+++++...+. ..+....+.++.++|.+|...|++++|+.+|++++++.+...+... ...++
T Consensus 130 ~~~~A~~~~~~al~~~~~----------~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~ 199 (293)
T 2qfc_A 130 DYEYCILELKKLLNQQLT----------GIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVR 199 (293)
T ss_dssp CHHHHHHHHHHHHTTCCC----------SSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhc----------CCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHH
Confidence 567888888888877654 2233335778999999999999999999999999999887765544 34899
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHhhh
Q 020735 253 RGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERA-ARFYDKYISRLE 320 (322)
Q Consensus 253 ~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A-~~~~~kAl~i~e 320 (322)
+++|.+|..+|+|++|++++++++++.+..++....+.+++++|.+|..+|++++| ..+|++|+.+++
T Consensus 200 ~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~ 268 (293)
T 2qfc_A 200 YNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFD 268 (293)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999987777777899999999999999999999 888999998875
No 14
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.54 E-value=8.1e-14 Score=114.51 Aligned_cols=102 Identities=22% Similarity=0.139 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCch
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 287 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~ 287 (322)
....++.+|..++..|++++|+..|++++++.|. ...+++++|.++...|++++|+.+|++++++ .|.
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l------~p~ 87 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY------DSRFFLGLGACRQAMGQYDLAIHSYSYGAVM------DIX 87 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------STT
T ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc------cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc------CCC
Confidence 7778999999999999999999999999999988 7889999999999999999999999999999 788
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 288 STEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 288 ~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
.+.+++++|.+|..+|++++|+.+|++++++.++
T Consensus 88 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 121 (148)
T 2vgx_A 88 EPRFPFHAAECLLQXGELAEAESGLFLAQELIAN 121 (148)
T ss_dssp CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred CchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC
Confidence 8899999999999999999999999999987653
No 15
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.54 E-value=3.9e-13 Score=126.08 Aligned_cols=136 Identities=15% Similarity=0.127 Sum_probs=75.7
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCC-hHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKD-PIEEKKAA 252 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d-~~~~~~a~ 252 (322)
+.+.++..|++++...+. .++....+.+++++|.+|...|++++|+.++++++++.+..++ ....+.++
T Consensus 116 ~~~~A~~~~~~al~~~~~----------~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 185 (378)
T 3q15_A 116 EYVEAIGYYREAEKELPF----------VSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSL 185 (378)
T ss_dssp CHHHHHHHHHHHHTTGGG----------CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhh----------CCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHH
Confidence 445555566666555443 2333444555555555555555555555555555555555444 33445555
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 020735 253 RGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRL 319 (322)
Q Consensus 253 ~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~ 319 (322)
.++|.+|...|++++|+++|++++++.++.++....+.++.++|.+|..+|++++|+.+|++++++.
T Consensus 186 ~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~ 252 (378)
T 3q15_A 186 FVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVS 252 (378)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 5555555555555555555555555555555555555555555555555555555555555555543
No 16
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.52 E-value=8.8e-13 Score=123.66 Aligned_cols=137 Identities=14% Similarity=0.134 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHhHhhhcccCCCCCccccccCC-cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHH
Q 020735 173 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDP-KKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKA 251 (322)
Q Consensus 173 l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~-~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a 251 (322)
.+.+.++..+.+++...+. .++ ....+.++.++|.+|...|++++|+++|++++++.+..++....+.+
T Consensus 155 ~~~~~A~~~~~~al~~~~~----------~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 224 (378)
T 3q15_A 155 KQTHVSMYHILQALDIYQN----------HPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAIS 224 (378)
T ss_dssp TCHHHHHHHHHHHHHHHHT----------STTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHh----------CCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 3778899999999998876 222 44578889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 252 ARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 252 ~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
+.++|.+|..+|++++|++++++++++.+..+++.. +.++.++|.+|..+|++++|..++++++++.+
T Consensus 225 ~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 292 (378)
T 3q15_A 225 LLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLL-PKVLFGLSWTLCKAGQTQKAFQFIEEGLDHIT 292 (378)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGH-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888776555 89999999999999999999999999999864
No 17
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.52 E-value=5.8e-13 Score=106.96 Aligned_cols=118 Identities=17% Similarity=0.206 Sum_probs=109.6
Q ss_pred CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Q 020735 203 DPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISERE 282 (322)
Q Consensus 203 ~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~ 282 (322)
++....+.++..+|.++...|++++|+.++++++++.+..++......++.++|.++...|++++|++++++++++.+..
T Consensus 3 ~d~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 82 (164)
T 3ro3_A 3 GSRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQL 82 (164)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 34556778899999999999999999999999999999988888888999999999999999999999999999999998
Q ss_pred CCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 283 GEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 283 ~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
++.+....++.++|.++...|++++|.+++++++++.+
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 120 (164)
T 3ro3_A 83 KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 120 (164)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 88888889999999999999999999999999998764
No 18
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.51 E-value=1.4e-13 Score=111.58 Aligned_cols=103 Identities=22% Similarity=0.198 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCc
Q 020735 207 EELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYS 286 (322)
Q Consensus 207 ~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~ 286 (322)
.....++.+|..++..|++++|+..|++++.+.|. ...+++++|.++...|++++|+.+|++++++ .|
T Consensus 16 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~p 83 (142)
T 2xcb_A 16 DTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY------DARYFLGLGACRQSLGLYEQALQSYSYGALM------DI 83 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CT
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc------cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc------CC
Confidence 36778899999999999999999999999999888 7889999999999999999999999999999 78
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 287 GSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 287 ~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
..+.+++++|.+|..+|++++|+.+|++++++.+.
T Consensus 84 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 118 (142)
T 2xcb_A 84 NEPRFPFHAAECHLQLGDLDGAESGFYSARALAAA 118 (142)
T ss_dssp TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 88889999999999999999999999999988653
No 19
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.51 E-value=6.8e-13 Score=110.79 Aligned_cols=115 Identities=16% Similarity=0.161 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCC------ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVK------DPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISER 281 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~------d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~ 281 (322)
.+..+...|..++..|+|++|+..|++++++.|... .....+.+|.|+|.++..+|+|++|+.+|+++|++..+
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 566788999999999999999999999999999832 12235569999999999999999999999999998444
Q ss_pred -cCCCchHHHHH----HHHHHHHHHcCCHHHHHHHHHHHHHhhhcC
Q 020735 282 -EGEYSGSTEAY----GAIADCYTELGDLERAARFYDKYISRLESD 322 (322)
Q Consensus 282 -~~d~~~~a~a~----~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~d 322 (322)
..-+|..+.+| +++|.++..+|++++|+..|++++++.++|
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d 135 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEER 135 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred cccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 33466788888 999999999999999999999999998765
No 20
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.50 E-value=8.2e-13 Score=119.81 Aligned_cols=152 Identities=13% Similarity=0.025 Sum_probs=124.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 020735 159 LQRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALEL 238 (322)
Q Consensus 159 ~~~l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l 238 (322)
...+.+++.......+.+.+++.+.+++...+. ...........+.+|..+...|++++|+.++++++++
T Consensus 75 ~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 144 (293)
T 2qfc_A 75 KKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEY----------HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQ 144 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCC----------CHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHhccccC----------ChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 334455555555566788888888888876543 1122234455677999999999999999999999998
Q ss_pred HHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020735 239 AQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGST-EAYGAIADCYTELGDLERAARFYDKYIS 317 (322)
Q Consensus 239 ~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a-~a~~~Lg~~y~~~gd~e~A~~~~~kAl~ 317 (322)
.+...+......+++++|.+|..+|+|++|+.+|++++++.+..++.+... .+++++|.+|..+|++++|+++++++++
T Consensus 145 ~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~ 224 (293)
T 2qfc_A 145 QLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIE 224 (293)
T ss_dssp CCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHH
Confidence 887777777788999999999999999999999999999988876655433 7999999999999999999999999998
Q ss_pred hhh
Q 020735 318 RLE 320 (322)
Q Consensus 318 i~e 320 (322)
+.+
T Consensus 225 ~~~ 227 (293)
T 2qfc_A 225 ISC 227 (293)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 21
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.50 E-value=3.2e-13 Score=106.47 Aligned_cols=100 Identities=15% Similarity=0.160 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCch
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 287 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~ 287 (322)
.+..+..+|..++..|++++|+..|++++++.+. ...+++++|.++...|++++|+.+|++++++ +|.
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~ 70 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE------DARGYSNRAAALAKLMSFPEAIADCNKAIEK------DPN 70 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTT
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC------ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHh------CCC
Confidence 5667889999999999999999999999999888 7889999999999999999999999999999 788
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 020735 288 STEAYGAIADCYTELGDLERAARFYDKYISRL 319 (322)
Q Consensus 288 ~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~ 319 (322)
...+++++|.+|..+|++++|+.+|++++++.
T Consensus 71 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 71 FVRAYIRKATAQIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhC
Confidence 88999999999999999999999999999887
No 22
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.50 E-value=3.1e-13 Score=111.80 Aligned_cols=105 Identities=15% Similarity=0.166 Sum_probs=98.2
Q ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC
Q 020735 205 KKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGE 284 (322)
Q Consensus 205 ~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d 284 (322)
....+..++.+|.+++..|++++|+.+|++++++.+. ...+++++|.+|...|++++|+.+|++++++
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~------ 74 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA------NPIYLSNRAAAYSASGQHEKAAEDAELATVV------ 74 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHh------
Confidence 3457888999999999999999999999999999988 7889999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 285 YSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 285 ~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
++....+++++|.+|..+|++++|+.+|++++++.++
T Consensus 75 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 111 (164)
T 3sz7_A 75 DPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGN 111 (164)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 7888999999999999999999999999999988754
No 23
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.49 E-value=3.2e-13 Score=117.49 Aligned_cols=122 Identities=12% Similarity=0.030 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHH
Q 020735 170 NAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEK 249 (322)
Q Consensus 170 ~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~ 249 (322)
....+.+.++..|++++...|. ...+++.+|.++...|++++|+..|++++++.|. ..
T Consensus 16 ~~~g~~~~A~~~~~~al~~~p~----------------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~------~~ 73 (217)
T 2pl2_A 16 YALGRYDAALTLFERALKENPQ----------------DPEALYWLARTQLKLGLVNPALENGKTLVARTPR------YL 73 (217)
T ss_dssp HHTTCHHHHHHHHHHHHTTSSS----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CH
T ss_pred HHcCCHHHHHHHHHHHHHhCCC----------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------cH
Confidence 3334566677777777776666 4566777777777777777777777777777776 56
Q ss_pred HHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020735 250 KAARGLGASLQRQ-----------GKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISR 318 (322)
Q Consensus 250 ~a~~~LG~~~~~~-----------gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i 318 (322)
.+++++|.++... |++++|+..|++++++ .|..+.++.++|.+|..+|++++|+..|++++++
T Consensus 74 ~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~------~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 147 (217)
T 2pl2_A 74 GGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERV------NPRYAPLHLQRGLVYALLGERDKAEASLKQALAL 147 (217)
T ss_dssp HHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHh------CcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhc
Confidence 6677777777777 7777777777777777 6666667777777777777777777777777665
Q ss_pred h
Q 020735 319 L 319 (322)
Q Consensus 319 ~ 319 (322)
.
T Consensus 148 ~ 148 (217)
T 2pl2_A 148 E 148 (217)
T ss_dssp C
T ss_pred c
Confidence 3
No 24
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.48 E-value=1.1e-12 Score=119.98 Aligned_cols=141 Identities=13% Similarity=0.052 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHH
Q 020735 169 INAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEE 248 (322)
Q Consensus 169 ~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~ 248 (322)
.....+.+.+++.|.+++...+. .++....+.++.++|.+|...|++++|+.+|++++++.+..++....
T Consensus 46 ~~~~g~~~~A~~~~~~al~~~~~----------~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~ 115 (307)
T 2ifu_A 46 FKNAKQLEQAKDAYLQEAEAHAN----------NRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTA 115 (307)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHH----------cCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 33445677788888888888887 56677789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 249 KKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 249 ~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
..++.++|.+|.. |++++|+++|++++++.+..++....+.++.++|.+|..+|++++|+.+|++++++.+
T Consensus 116 a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~ 186 (307)
T 2ifu_A 116 AMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYK 186 (307)
T ss_dssp HHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999999999999999999999999999999999999999999999865
No 25
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.48 E-value=1.1e-12 Score=119.14 Aligned_cols=149 Identities=14% Similarity=0.043 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHH
Q 020735 162 VNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRN-QDLEKAFTEFKAALELAQ 240 (322)
Q Consensus 162 l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~-g~~~~Al~~~~kAl~l~~ 240 (322)
+.+.+.......+.+.++..|++++...+. .++....+.++.++|.+|... |++++|+.+|++++++.+
T Consensus 80 ~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~----------~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~ 149 (292)
T 1qqe_A 80 YVEAYKCFKSGGNSVNAVDSLENAIQIFTH----------RGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYA 149 (292)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHH----------cCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 333333333444889999999999998876 455555677899999999996 999999999999999999
Q ss_pred hCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCC-chHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 020735 241 NVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEY-SGSTEAYGAIADCYTELGDLERAARFYDKYISRL 319 (322)
Q Consensus 241 ~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~-~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~ 319 (322)
..++......++.++|.++..+|+|++|+.+|++++++....... .....++.++|.+|..+|++++|+.+|++++++.
T Consensus 150 ~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~ 229 (292)
T 1qqe_A 150 QDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSED 229 (292)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-
T ss_pred hCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 888777778899999999999999999999999999885543332 2345689999999999999999999999998765
Q ss_pred h
Q 020735 320 E 320 (322)
Q Consensus 320 e 320 (322)
+
T Consensus 230 p 230 (292)
T 1qqe_A 230 P 230 (292)
T ss_dssp -
T ss_pred C
Confidence 4
No 26
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.48 E-value=9.1e-13 Score=119.49 Aligned_cols=149 Identities=13% Similarity=0.058 Sum_probs=121.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 020735 161 RVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEE-LLSRLKTGKNFLRNQDLEKAFTEFKAALELA 239 (322)
Q Consensus 161 ~l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~-a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~ 239 (322)
.+.+++.......+.+.++..+++++...+. .+.... +..+..+|..+...+++++|+.+|++++++.
T Consensus 77 ~l~~~i~~~~~~~~y~~a~~~~~~~l~~~~~-----------~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~ 145 (293)
T 3u3w_A 77 QFKDQVIMLCKQKRYKEIYNKVWNELKKEEY-----------HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQ 145 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCC-----------CHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhccccC-----------ChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHh
Confidence 4444455555555778888888888875433 111112 3344568999999999999999999999987
Q ss_pred HhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc-CCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020735 240 QNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISERE-GEYSGSTEAYGAIADCYTELGDLERAARFYDKYISR 318 (322)
Q Consensus 240 ~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~-~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i 318 (322)
....+......++.++|.+|..+|+|++|+.+|++++++.+.. .+.+..+.+++++|.+|..+|++++|++++++++++
T Consensus 146 ~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~ 225 (293)
T 3u3w_A 146 LTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEI 225 (293)
T ss_dssp CCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 7777777778889999999999999999999999999999887 566678889999999999999999999999999998
Q ss_pred hh
Q 020735 319 LE 320 (322)
Q Consensus 319 ~e 320 (322)
.+
T Consensus 226 ~~ 227 (293)
T 3u3w_A 226 SC 227 (293)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 27
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.48 E-value=1.6e-12 Score=108.77 Aligned_cols=120 Identities=19% Similarity=0.212 Sum_probs=103.3
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 253 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~ 253 (322)
+.+.++..+.+++...+. ...++..+|..+...++++.|...+.+++++.+. ...++.
T Consensus 54 ~~~~a~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~------~~~~~~ 111 (184)
T 3vtx_A 54 LPNDAIESLKKFVVLDTT----------------SAEAYYILGSANFMIDEKQAAIDALQRAIALNTV------YADAYY 111 (184)
T ss_dssp CHHHHHHHHHHHHHHCCC----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHH
T ss_pred CHHHHHHHHHHHHhcCch----------------hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc------chHHHH
Confidence 556666666666666555 4556777888888888888888888888888777 678899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 254 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 254 ~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
.+|.++..+|++++|++.|++++++ +|..+.+++++|.+|..+|++++|+.+|++++++.++
T Consensus 112 ~lg~~~~~~g~~~~A~~~~~~~l~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 173 (184)
T 3vtx_A 112 KLGLVYDSMGEHDKAIEAYEKTISI------KPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEK 173 (184)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHhCCchhHHHHHHHHHHh------cchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCcc
Confidence 9999999999999999999999999 8888999999999999999999999999999987654
No 28
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.48 E-value=4.9e-13 Score=115.55 Aligned_cols=130 Identities=15% Similarity=0.158 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHH----------------HHHHHHHcCCHH
Q 020735 163 NEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLK----------------TGKNFLRNQDLE 226 (322)
Q Consensus 163 ~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~----------------la~~y~~~g~~~ 226 (322)
..++.......+.+.++..|++++...|. ...+++. +|.+|...|+++
T Consensus 8 ~~~g~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~ 71 (208)
T 3urz_A 8 LQKVSAAIEAGQNGQAVSYFRQTIALNID----------------RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYD 71 (208)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCHH----------------HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHhCCC----------------ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHH
Confidence 33444445555778888899999888776 4455555 999999999999
Q ss_pred HHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH------
Q 020735 227 KAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYT------ 300 (322)
Q Consensus 227 ~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~------ 300 (322)
+|+..|++++++.|. ...+++++|.++...|++++|+.+|++++++ +|..+.+++++|.+|.
T Consensus 72 ~A~~~~~~al~~~p~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~P~~~~a~~~lg~~~~~~~~~~ 139 (208)
T 3urz_A 72 KAYLFYKELLQKAPN------NVDCLEACAEMQVCRGQEKDALRMYEKILQL------EADNLAANIFLGNYYYLTAEQE 139 (208)
T ss_dssp HHHHHHHHHHHHCTT------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc------CCCCHHHHHHHHHHHHHHhHHH
Confidence 999999999999998 7899999999999999999999999999998 6666666666666553
Q ss_pred -----------------------------HcCCHHHHHHHHHHHHHhhh
Q 020735 301 -----------------------------ELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 301 -----------------------------~~gd~e~A~~~~~kAl~i~e 320 (322)
..|++++|+.+|++++++.+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P 188 (208)
T 3urz_A 140 KKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFP 188 (208)
T ss_dssp HHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 34578899999999988765
No 29
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.47 E-value=1.1e-12 Score=108.26 Aligned_cols=109 Identities=14% Similarity=0.103 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCC------------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 020735 207 EELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKD------------PIEEKKAARGLGASLQRQGKYREAIKYHSM 274 (322)
Q Consensus 207 ~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d------------~~~~~~a~~~LG~~~~~~gd~~eAi~~~~k 274 (322)
..+..+...|..++..|+|++|+..|.+++++.+...+ ......+++++|.+|...|+|++|+.++++
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 36778889999999999999999999999999433110 222678899999999999999999999999
Q ss_pred HHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 275 VLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 275 aL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
++++ +|..+.+++.+|.+|..+|++++|+.+|++++++.++
T Consensus 89 al~~------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~ 129 (162)
T 3rkv_A 89 VLKR------EETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPA 129 (162)
T ss_dssp HHHH------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGG
T ss_pred HHhc------CCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCC
Confidence 9999 8888999999999999999999999999999988764
No 30
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.46 E-value=5.2e-13 Score=116.13 Aligned_cols=123 Identities=17% Similarity=0.138 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHH
Q 020735 170 NAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRN-----------QDLEKAFTEFKAALEL 238 (322)
Q Consensus 170 ~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~-----------g~~~~Al~~~~kAl~l 238 (322)
....+.+.++..|++++...|. ...+++.+|.++... |++++|+..|++++++
T Consensus 50 ~~~g~~~~A~~~~~~al~~~P~----------------~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 113 (217)
T 2pl2_A 50 LKLGLVNPALENGKTLVARTPR----------------YLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERV 113 (217)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCC----------------cHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHh
Confidence 3344778899999999998887 567888999999999 9999999999999999
Q ss_pred HHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020735 239 AQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISR 318 (322)
Q Consensus 239 ~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i 318 (322)
.|. ...++.++|.++...|++++|+..|++++++ . ..+.+++++|.+|...|++++|+..|++++++
T Consensus 114 ~P~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 180 (217)
T 2pl2_A 114 NPR------YAPLHLQRGLVYALLGERDKAEASLKQALAL------E-DTPEIRSALAELYLSMGRLDEALAQYAKALEQ 180 (217)
T ss_dssp CTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------C-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred Ccc------cHHHHHHHHHHHHHcCChHHHHHHHHHHHhc------c-cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 888 7889999999999999999999999999999 4 56788999999999999999999999999987
Q ss_pred hhc
Q 020735 319 LES 321 (322)
Q Consensus 319 ~e~ 321 (322)
.++
T Consensus 181 ~P~ 183 (217)
T 2pl2_A 181 APK 183 (217)
T ss_dssp STT
T ss_pred CCC
Confidence 654
No 31
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.46 E-value=5.8e-12 Score=116.93 Aligned_cols=138 Identities=23% Similarity=0.291 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHH
Q 020735 173 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAA 252 (322)
Q Consensus 173 l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~ 252 (322)
.+.+.++..+++++...+. .++....+.++..+|.+|...|++++|+.++++++++.+..++......++
T Consensus 201 g~~~~A~~~~~~al~~~~~----------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 270 (406)
T 3sf4_A 201 GNFRDAVIAHEQRLLIAKE----------FGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSC 270 (406)
T ss_dssp TBHHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHh----------cCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHH
Confidence 3778899999999988776 445555677899999999999999999999999999999999988889999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 253 RGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 253 ~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
.++|.++...|++++|+.++++++++.+..++.+....++..+|.+|...|++++|..+|++++++.+
T Consensus 271 ~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 338 (406)
T 3sf4_A 271 YSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISR 338 (406)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988888899999999999999999999999999998864
No 32
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.46 E-value=5.9e-12 Score=112.88 Aligned_cols=138 Identities=23% Similarity=0.299 Sum_probs=124.3
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 253 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~ 253 (322)
+.+.++..+++++...+. .++....+.++..+|.++...|++++|+.++++++++.+..++......++.
T Consensus 198 ~~~~A~~~~~~a~~~~~~----------~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 267 (338)
T 3ro2_A 198 NFRDAVIAHEQRLLIAKE----------FGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCY 267 (338)
T ss_dssp CHHHHHHHHHHHHHHHHH----------HTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHh----------cCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHH
Confidence 668888889998888765 3455556778999999999999999999999999999999999988899999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 254 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 254 ~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
.+|.++...|++++|+.++++++++.+..++.+....++..+|.+|...|++++|..++++++++.++
T Consensus 268 ~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 335 (338)
T 3ro2_A 268 SLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 335 (338)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998888888899999999999999999999999999998753
No 33
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.45 E-value=1.3e-12 Score=113.25 Aligned_cols=131 Identities=15% Similarity=0.142 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhhcc-cCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 020735 162 VNEQLRQINAALRRQAKIESYAPSLSYAP-VGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 240 (322)
Q Consensus 162 l~~~l~~~~~~l~~e~al~~y~~al~~~~-~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~ 240 (322)
+...+.......+.+.++..|++++...+ . ....++++|.++...|++++|+.+|++++++.|
T Consensus 10 ~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~----------------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p 73 (228)
T 4i17_A 10 LKNEGNDALNAKNYAVAFEKYSEYLKLTNNQ----------------DSVTAYNCGVCADNIKKYKEAADYFDIAIKKNY 73 (228)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhccCCC----------------CcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCc
Confidence 33444455555678899999999999886 3 345777799999999999999999999999888
Q ss_pred hCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHH-------HHHHHHHHHHHHcCCHHHHHHHHH
Q 020735 241 NVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGST-------EAYGAIADCYTELGDLERAARFYD 313 (322)
Q Consensus 241 ~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a-------~a~~~Lg~~y~~~gd~e~A~~~~~ 313 (322)
. ...++.++|.+|..+|++++|+.++++++++ .|... .++.++|.++...|++++|+++|+
T Consensus 74 ~------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~ 141 (228)
T 4i17_A 74 N------LANAYIGKSAAYRDMKNNQEYIATLTEGIKA------VPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYK 141 (228)
T ss_dssp S------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------STTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred c------hHHHHHHHHHHHHHcccHHHHHHHHHHHHHH------CCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHH
Confidence 8 8899999999999999999999999999998 45434 679999999999999999999999
Q ss_pred HHHHhhh
Q 020735 314 KYISRLE 320 (322)
Q Consensus 314 kAl~i~e 320 (322)
+++++.+
T Consensus 142 ~al~~~p 148 (228)
T 4i17_A 142 HATDVTS 148 (228)
T ss_dssp HHTTSSC
T ss_pred HHHhcCC
Confidence 9998654
No 34
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.44 E-value=1.3e-11 Score=114.43 Aligned_cols=136 Identities=18% Similarity=0.242 Sum_probs=124.3
Q ss_pred HHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHH
Q 020735 175 RQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARG 254 (322)
Q Consensus 175 ~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~ 254 (322)
.+.++..+.+++..... .++....+.++..+|.+|...|++++|+.++++++++.+..++......++.+
T Consensus 163 ~~~A~~~~~~al~~~~~----------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 232 (406)
T 3sf4_A 163 LQAAVDFYEENLSLVTA----------LGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSN 232 (406)
T ss_dssp HHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh----------ccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 77888888888887665 44556677889999999999999999999999999999999999889999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 255 LGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 255 LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
+|.++...|++++|+.++++++++.+..++....+.++.++|.+|...|++++|..+|++++++.+
T Consensus 233 la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 298 (406)
T 3sf4_A 233 LGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 298 (406)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888888899999999999999999999999999998764
No 35
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.44 E-value=5.8e-12 Score=118.04 Aligned_cols=137 Identities=22% Similarity=0.300 Sum_probs=125.2
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 253 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~ 253 (322)
+.+.++..+++++...+. .++....+.++..+|.+|...|++++|+.++++++++.+..++......++.
T Consensus 238 ~~~~A~~~~~~al~~~~~----------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 307 (411)
T 4a1s_A 238 DFQAAIEHHQERLRIARE----------FGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCY 307 (411)
T ss_dssp CHHHHHHHHHHHHHHHHH----------HTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHh----------cCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 668888889998888765 3444556678899999999999999999999999999999999888999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 254 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 254 ~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
++|.++...|++++|+.++++++++.+..++......++..+|.+|..+|++++|..+|++++++.+
T Consensus 308 ~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 374 (411)
T 4a1s_A 308 SLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALKYAEQHLQLAX 374 (411)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999988888899999999999999999999999999999875
No 36
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.44 E-value=6.3e-13 Score=136.28 Aligned_cols=133 Identities=14% Similarity=0.189 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 020735 161 RVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 240 (322)
Q Consensus 161 ~l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~ 240 (322)
.+++.+......++.++|+..|++++...|. ...+++++|.+|..+|++++|+.+|++++++.+
T Consensus 11 al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~----------------~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P 74 (723)
T 4gyw_A 11 SLNNLANIKREQGNIEEAVRLYRKALEVFPE----------------FAAAHSNLASVLQQQGKLQEALMHYKEAIRISP 74 (723)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC----------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 4455455555666899999999999999987 677999999999999999999999999999999
Q ss_pred hCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 241 NVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 241 ~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
+ ...+++++|.++..+|++++|+++|++++++ +|..+.+++++|.+|..+|++++|+++|++++++.+
T Consensus 75 ~------~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l------~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P 142 (723)
T 4gyw_A 75 T------FADAYSNMGNTLKEMQDVQGALQCYTRAIQI------NPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKP 142 (723)
T ss_dssp T------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS
T ss_pred C------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 8 8899999999999999999999999999999 888899999999999999999999999999998765
Q ss_pred c
Q 020735 321 S 321 (322)
Q Consensus 321 ~ 321 (322)
+
T Consensus 143 ~ 143 (723)
T 4gyw_A 143 D 143 (723)
T ss_dssp C
T ss_pred C
Confidence 4
No 37
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.43 E-value=8.9e-12 Score=105.03 Aligned_cols=113 Identities=19% Similarity=0.188 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCc-
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYS- 286 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~- 286 (322)
.+.++..+|.++...|++++|+.++++++++.+..++......++.++|.++...|++++|++++++++++.+..++++
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 104 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPL 104 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHH
Confidence 5778899999999999999999999999999999999999999999999999999999999999999999999888555
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 287 GSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 287 ~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
..+.++.++|.+|...|++++|..++++++++.+
T Consensus 105 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~ 138 (203)
T 3gw4_A 105 AASANAYEVATVALHFGDLAGARQEYEKSLVYAQ 138 (203)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 7888999999999999999999999999998764
No 38
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.43 E-value=1.3e-11 Score=115.73 Aligned_cols=136 Identities=17% Similarity=0.249 Sum_probs=123.0
Q ss_pred HHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHH
Q 020735 175 RQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARG 254 (322)
Q Consensus 175 ~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~ 254 (322)
.+.++..+++++...+. .++....+.++..+|.+|...|++++|+.++++++++.+..++......++.+
T Consensus 199 ~~~A~~~~~~al~~~~~----------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 268 (411)
T 4a1s_A 199 LTRAVEFYQENLKLMRD----------LGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSN 268 (411)
T ss_dssp HHHHHHHHHHHHHHHHH----------HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH----------cCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 67788888888877655 34455577789999999999999999999999999999998888888889999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 255 LGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 255 LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
+|.+|...|++++|+.++++++++....++......++..+|.+|...|++++|..++++++++.+
T Consensus 269 la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 334 (411)
T 4a1s_A 269 LGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQ 334 (411)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998888878889999999999999999999999999998764
No 39
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.43 E-value=3.9e-12 Score=106.38 Aligned_cols=128 Identities=20% Similarity=0.202 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCh
Q 020735 166 LRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDP 245 (322)
Q Consensus 166 l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~ 245 (322)
+......++.+.++..|++++...|. ...++..+|.+|...|++++|+..+.+++...+.
T Consensus 12 G~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~---- 71 (184)
T 3vtx_A 12 GDKKRTKGDFDGAIRAYKKVLKADPN----------------NVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT---- 71 (184)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC----
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCC----------------CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCch----
Confidence 33444555889999999999999887 5778999999999999999999999999998887
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 246 IEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 246 ~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
...++..+|.++...+++++|++.+.+++++ .|....++..+|.+|..+|++++|+++|++++++.+.
T Consensus 72 --~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~ 139 (184)
T 3vtx_A 72 --SAEAYYILGSANFMIDEKQAAIDALQRAIAL------NTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPG 139 (184)
T ss_dssp --CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred --hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcch
Confidence 7888999999999999999999999999999 7888899999999999999999999999999987654
No 40
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.43 E-value=1.5e-12 Score=111.24 Aligned_cols=130 Identities=13% Similarity=0.007 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCh
Q 020735 166 LRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDP 245 (322)
Q Consensus 166 l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~ 245 (322)
........+.+.++..|++++.. ...+++.+|.+|...|++++|+.+|++++++.+.
T Consensus 13 g~~~~~~~~~~~A~~~~~~a~~~-------------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~---- 69 (213)
T 1hh8_A 13 GVLAADKKDWKGALDAFSAVQDP-------------------HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKH---- 69 (213)
T ss_dssp HHHHHHTTCHHHHHHHHHTSSSC-------------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----
T ss_pred HHHHHHhCCHHHHHHHHHHHcCC-------------------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc----
Confidence 33334444666777777766421 2458899999999999999999999999999877
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC----------CCchHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 020735 246 IEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREG----------EYSGSTEAYGAIADCYTELGDLERAARFYDKY 315 (322)
Q Consensus 246 ~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~----------d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kA 315 (322)
...+++++|.++...|++++|+++|++++++.+... ..+....+++++|.+|..+|++++|..+|+++
T Consensus 70 --~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 147 (213)
T 1hh8_A 70 --LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALA 147 (213)
T ss_dssp --CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred --chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 678999999999999999999999999999755433 45567799999999999999999999999999
Q ss_pred HHhhh
Q 020735 316 ISRLE 320 (322)
Q Consensus 316 l~i~e 320 (322)
+++.+
T Consensus 148 l~~~p 152 (213)
T 1hh8_A 148 TSMKS 152 (213)
T ss_dssp HTTCC
T ss_pred HHcCc
Confidence 98764
No 41
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.43 E-value=1.8e-11 Score=109.63 Aligned_cols=136 Identities=18% Similarity=0.244 Sum_probs=122.6
Q ss_pred HHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHH
Q 020735 175 RQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARG 254 (322)
Q Consensus 175 ~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~ 254 (322)
.+.++..+++++...+. .++....+..+..+|.++...|++++|+.++++++++.+..++......++.+
T Consensus 159 ~~~A~~~~~~a~~~~~~----------~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~ 228 (338)
T 3ro2_A 159 LQAAVDLYEENLSLVTA----------LGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSN 228 (338)
T ss_dssp HHHHHHHHHHHHHHHHH----------HTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh----------cCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Confidence 67777888888777655 34455567789999999999999999999999999999998888888999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 255 LGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 255 LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
+|.++...|++++|+.++++++++.+..++......++..+|.+|...|++++|..++++++++.+
T Consensus 229 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 294 (338)
T 3ro2_A 229 LGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 294 (338)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888888899999999999999999999999999998764
No 42
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.42 E-value=1.1e-11 Score=108.98 Aligned_cols=143 Identities=17% Similarity=0.184 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC--CChHH
Q 020735 170 NAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV--KDPIE 247 (322)
Q Consensus 170 ~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~--~d~~~ 247 (322)
....+.+.++..|++++...... ...+......++..+|.+|...|++++|+.++++++++.+.. .+...
T Consensus 54 ~~~g~~~~A~~~~~~al~~~~~~--------~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 125 (283)
T 3edt_B 54 RDQNKYKEAAHLLNDALAIREKT--------LGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD 125 (283)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHH--------TCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHcccHHHHHHHHHHHHHHHHHH--------cCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH
Confidence 33346778888888888876430 012344577889999999999999999999999999998664 33456
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc--CCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 248 EKKAARGLGASLQRQGKYREAIKYHSMVLQISERE--GEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 248 ~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~--~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
...++.++|.++...|++++|+.++++++++.+.. ++.+....++.++|.+|...|++++|..++++++++.+
T Consensus 126 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~ 200 (283)
T 3edt_B 126 VAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAH 200 (283)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999998775 44677889999999999999999999999999998754
No 43
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.40 E-value=4.2e-12 Score=100.71 Aligned_cols=102 Identities=11% Similarity=0.059 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCch
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 287 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~ 287 (322)
.+..++.+|..++..|++++|+..|++++++.+. ...+++++|.++...|++++|+.++++++++ .+.
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~------~p~ 75 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL------VAVYYTNRALCYLKMQQPEQALADCRRALEL------DGQ 75 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTT
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh------Cch
Confidence 4567889999999999999999999999999887 6789999999999999999999999999999 777
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 288 STEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 288 ~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
.+.+++++|.+|...|++++|+.+|++++++.++
T Consensus 76 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 76 SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 8899999999999999999999999999988754
No 44
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.40 E-value=9.3e-12 Score=109.32 Aligned_cols=136 Identities=14% Similarity=0.123 Sum_probs=114.8
Q ss_pred HHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC--CChHHHHHHHH
Q 020735 176 QAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV--KDPIEEKKAAR 253 (322)
Q Consensus 176 e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~--~d~~~~~~a~~ 253 (322)
+.++..|++++...... ...+....+.++..+|.+|...|++++|+.++++++++.... .+......++.
T Consensus 18 ~~A~~~~~~al~~~~~~--------~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 89 (283)
T 3edt_B 18 GSAVPLCKQALEDLEKT--------SGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLN 89 (283)
T ss_dssp SSHHHHHHHHHHHHHHH--------HCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh--------cCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHH
Confidence 45666677777665430 011234577889999999999999999999999999998776 66677889999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHc--CCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 020735 254 GLGASLQRQGKYREAIKYHSMVLQISERE--GEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRL 319 (322)
Q Consensus 254 ~LG~~~~~~gd~~eAi~~~~kaL~l~~~~--~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~ 319 (322)
++|.++...|++++|+++|++++++.++. .+++....++.++|.+|...|++++|..++++++++.
T Consensus 90 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 157 (283)
T 3edt_B 90 NLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIY 157 (283)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998876 4457789999999999999999999999999999884
No 45
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.39 E-value=1.6e-12 Score=103.05 Aligned_cols=99 Identities=17% Similarity=0.137 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHH
Q 020735 211 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTE 290 (322)
Q Consensus 211 ~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~ 290 (322)
.++.+|..+...|++++|+..|++++++.|. ...+++++|.++...|++++|+..|++++++ +|....
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l------~P~~~~ 86 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPE------REEAWRSLGLTQAENEKDGLAIIALNHARML------DPKDIA 86 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHH
Confidence 4678999999999999999999999999998 7899999999999999999999999999999 888889
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 291 AYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 291 a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
+++++|.+|...|++++|+.+|++++++.+.
T Consensus 87 ~~~~la~~~~~~g~~~~A~~~~~~al~~~P~ 117 (121)
T 1hxi_A 87 VHAALAVSHTNEHNANAALASLRAWLLSQPQ 117 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC
Confidence 9999999999999999999999999987653
No 46
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.39 E-value=3.7e-12 Score=110.39 Aligned_cols=129 Identities=7% Similarity=0.032 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCh-HHHH
Q 020735 171 AALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDP-IEEK 249 (322)
Q Consensus 171 ~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~-~~~~ 249 (322)
...+.+.++..|++++...|. ...+++.+|.+|...|++++|+..+++++++.|..... ....
T Consensus 54 ~~~~~~~A~~~~~~al~~~p~----------------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~ 117 (228)
T 4i17_A 54 NIKKYKEAADYFDIAIKKNYN----------------LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYA 117 (228)
T ss_dssp HTTCHHHHHHHHHHHHHTTCS----------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HhhcHHHHHHHHHHHHHhCcc----------------hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHH
Confidence 334678899999999988777 77889999999999999999999999999988862211 1133
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCch--HHHHHHHHHHHHHHcCCH----------------------
Q 020735 250 KAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG--STEAYGAIADCYTELGDL---------------------- 305 (322)
Q Consensus 250 ~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~--~a~a~~~Lg~~y~~~gd~---------------------- 305 (322)
.++.++|.++...|++++|+++|++++++ .|. .+.+++++|.+|...|+.
T Consensus 118 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 191 (228)
T 4i17_A 118 IYYLKEGQKFQQAGNIEKAEENYKHATDV------TSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAK 191 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTTS------SCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHH
T ss_pred HHHHHHhHHHHHhccHHHHHHHHHHHHhc------CCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHH
Confidence 67999999999999999999999999998 888 889999999999999999
Q ss_pred -----HHHHHHHHHHHHhhhc
Q 020735 306 -----ERAARFYDKYISRLES 321 (322)
Q Consensus 306 -----e~A~~~~~kAl~i~e~ 321 (322)
++|+.+|++++++.++
T Consensus 192 ~~~~~~~A~~~~~~a~~l~p~ 212 (228)
T 4i17_A 192 ADAAFKKAVDYLGEAVTLSPN 212 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999988765
No 47
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.39 E-value=4e-12 Score=101.45 Aligned_cols=112 Identities=13% Similarity=0.153 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 020735 160 QRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELA 239 (322)
Q Consensus 160 ~~l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~ 239 (322)
+...+++.......+.+.+++.|++++...|. ...+++++|.+|...|++++|+..|++++++.
T Consensus 14 ~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 77 (126)
T 4gco_A 14 QEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE----------------NAILYSNRAACLTKLMEFQRALDDCDTCIRLD 77 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC----------------CHHHHHHHhhHHHhhccHHHHHHHHHHHHHhh
Confidence 35566777788888999999999999999887 67789999999999999999999999999998
Q ss_pred HhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 020735 240 QNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCY 299 (322)
Q Consensus 240 ~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y 299 (322)
+. ...+++++|.++..+|++++|++.|++++++ +|....++.+|+.++
T Consensus 78 p~------~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l------~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 78 SK------FIKGYIRKAACLVAMREWSKAQRAYEDALQV------DPSNEEAREGVRNCL 125 (126)
T ss_dssp TT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHC
T ss_pred hh------hhHHHHHHHHHHHHCCCHHHHHHHHHHHHHH------CcCCHHHHHHHHHhc
Confidence 88 7889999999999999999999999999999 888889999998764
No 48
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.38 E-value=1.8e-11 Score=109.33 Aligned_cols=140 Identities=14% Similarity=0.142 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC--CChHHHH
Q 020735 172 ALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV--KDPIEEK 249 (322)
Q Consensus 172 ~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~--~d~~~~~ 249 (322)
..+.+.++..+++++...... ...+......++..+|.+|...|++++|+.++++++++.+.. .+.....
T Consensus 40 ~g~~~~A~~~~~~a~~~~~~~--------~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 111 (311)
T 3nf1_A 40 QGRYEVAVPLCKQALEDLEKT--------SGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVA 111 (311)
T ss_dssp TTCHHHHHHHHHHHHHHHHHH--------HCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHH--------cCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHH
Confidence 346677778888888765430 001234467788999999999999999999999999998776 6667788
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc--CCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 020735 250 KAARGLGASLQRQGKYREAIKYHSMVLQISERE--GEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRL 319 (322)
Q Consensus 250 ~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~--~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~ 319 (322)
.++.++|.++...|++++|+.++++++++.++. ++.+....++.++|.+|...|++++|++++++++++.
T Consensus 112 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~ 183 (311)
T 3nf1_A 112 ATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIY 183 (311)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998876 6678889999999999999999999999999999874
No 49
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.37 E-value=1.7e-12 Score=123.44 Aligned_cols=128 Identities=9% Similarity=0.032 Sum_probs=99.4
Q ss_pred HHHHHHHHH-HHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCC
Q 020735 166 LRQINAALR-RQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKD 244 (322)
Q Consensus 166 l~~~~~~l~-~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d 244 (322)
...+....+ .+.++..|++++...|. ...+++++|.++...|++++|+..|++++++.++
T Consensus 138 g~~l~~~g~d~~eAl~~~~~al~l~P~----------------~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~--- 198 (382)
T 2h6f_A 138 RVLLKSLQKDLHEEMNYITAIIEEQPK----------------NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAK--- 198 (382)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTT---
T ss_pred HHHHHHcccCHHHHHHHHHHHHHHCCC----------------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc---
Confidence 333333344 78888888888887776 5667888888888888888888888888888887
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH-cCCHHHH-----HHHHHHHHHh
Q 020735 245 PIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTE-LGDLERA-----ARFYDKYISR 318 (322)
Q Consensus 245 ~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~-~gd~e~A-----~~~~~kAl~i 318 (322)
...+++++|.++..+|++++|+.+|+++|++ +|....+|+++|.++.. .|.+++| +.+|++++++
T Consensus 199 ---~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l------~P~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l 269 (382)
T 2h6f_A 199 ---NYHAWQHRQWVIQEFKLWDNELQYVDQLLKE------DVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKL 269 (382)
T ss_dssp ---CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHcCChHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHH
Confidence 7778888888888888888888888888888 77778888888888888 4444677 4888888877
Q ss_pred hhc
Q 020735 319 LES 321 (322)
Q Consensus 319 ~e~ 321 (322)
.++
T Consensus 270 ~P~ 272 (382)
T 2h6f_A 270 VPH 272 (382)
T ss_dssp STT
T ss_pred CCC
Confidence 654
No 50
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.36 E-value=3.6e-11 Score=107.39 Aligned_cols=140 Identities=19% Similarity=0.250 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC--CChHHHHH
Q 020735 173 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV--KDPIEEKK 250 (322)
Q Consensus 173 l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~--~d~~~~~~ 250 (322)
.+.+.++..+++++...... ...+......++..+|.+|...|++++|+.++++++++.... ++......
T Consensus 83 g~~~~A~~~~~~al~~~~~~--------~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 154 (311)
T 3nf1_A 83 NKYKDAANLLNDALAIREKT--------LGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAK 154 (311)
T ss_dssp TCHHHHHHHHHHHHHHHHHH--------HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHH--------hCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHH
Confidence 36677888888888775430 012334567789999999999999999999999999998665 55666888
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc--CCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 251 AARGLGASLQRQGKYREAIKYHSMVLQISERE--GEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 251 a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~--~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
++.++|.++...|++++|++++++++++.++. ++.+....++..+|.+|...|++++|..++++++++.+
T Consensus 155 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 226 (311)
T 3nf1_A 155 QLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAH 226 (311)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998876 55777888999999999999999999999999998653
No 51
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.36 E-value=4.1e-12 Score=105.86 Aligned_cols=120 Identities=13% Similarity=0.160 Sum_probs=105.3
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 253 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~ 253 (322)
+.+.++..+++++...+. ....++.+|.+|...|++++|+.+|++++++.+. ...++.
T Consensus 25 ~~~~A~~~~~~al~~~p~----------------~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~ 82 (177)
T 2e2e_A 25 NPEAQLQALQDKIRANPQ----------------NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE------NAELYA 82 (177)
T ss_dssp --CCCCHHHHHHHHHCCS----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS------CHHHHH
T ss_pred CHHHHHHHHHHHHHhCCC----------------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC------CHHHHH
Confidence 445566677777776665 4568899999999999999999999999999987 678899
Q ss_pred HHHHH-HHHcCCH--HHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 254 GLGAS-LQRQGKY--REAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 254 ~LG~~-~~~~gd~--~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
++|.+ +...|++ ++|+.++++++++ .|....+++++|.+|...|++++|..+|++++++.++
T Consensus 83 ~la~~l~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 147 (177)
T 2e2e_A 83 ALATVLYYQASQHMTAQTRAMIDKALAL------DSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSP 147 (177)
T ss_dssp HHHHHHHHHTTTCCCHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCT
T ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCC
Confidence 99999 8899999 9999999999999 7777889999999999999999999999999987654
No 52
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.36 E-value=4.6e-11 Score=103.74 Aligned_cols=132 Identities=15% Similarity=0.140 Sum_probs=95.6
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh------------
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQN------------ 241 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~------------ 241 (322)
+.+.++..+++++...+. ...+.......+..+|.+|...|++++|+.+|++++++.+.
T Consensus 53 ~~~~A~~~~~~a~~~~~~---------~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 123 (258)
T 3uq3_A 53 EYETAISTLNDAVEQGRE---------MRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEK 123 (258)
T ss_dssp CHHHHHHHHHHHHHHHHH---------TTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcc---------cccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHH
Confidence 567777777777776665 11122333677778888888888888888888888885332
Q ss_pred --------CCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 020735 242 --------VKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYD 313 (322)
Q Consensus 242 --------~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~ 313 (322)
....+....++..+|.++...|++++|+.+|++++++ .+....++.++|.+|...|++++|..+++
T Consensus 124 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 197 (258)
T 3uq3_A 124 ELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKR------APEDARGYSNRAAALAKLMSFPEAIADCN 197 (258)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc------CcccHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 1135556677888888888888888888888888877 56666778888888888888888888888
Q ss_pred HHHHhhh
Q 020735 314 KYISRLE 320 (322)
Q Consensus 314 kAl~i~e 320 (322)
+++++.+
T Consensus 198 ~al~~~~ 204 (258)
T 3uq3_A 198 KAIEKDP 204 (258)
T ss_dssp HHHHHCT
T ss_pred HHHHhCH
Confidence 8877654
No 53
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.35 E-value=1.4e-11 Score=93.91 Aligned_cols=102 Identities=16% Similarity=0.252 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCch
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 287 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~ 287 (322)
.+..++.+|..+...|++++|+..|+++++..+. ...++.++|.++...|++++|+.++++++++ .+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~------~~~ 70 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH------NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDL------KPD 70 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------CTT
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC------cHHHHHHHHHHHHhhccHHHHHHHHHHHHHh------Ccc
Confidence 4567888999999999999999999999998876 6778999999999999999999999999998 677
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 288 STEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 288 ~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
...++.++|.+|...|++++|..++++++++.++
T Consensus 71 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~ 104 (118)
T 1elw_A 71 WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEAN 104 (118)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCC
Confidence 7889999999999999999999999999987543
No 54
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.35 E-value=3e-11 Score=93.68 Aligned_cols=121 Identities=26% Similarity=0.421 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHH
Q 020735 173 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAA 252 (322)
Q Consensus 173 l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~ 252 (322)
.+.+.++..+++++...+. ....+..+|.++...|++++|+..++++++..+. ...++
T Consensus 15 ~~~~~A~~~~~~~~~~~~~----------------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~ 72 (136)
T 2fo7_A 15 GDYDEAIEYYQKALELDPR----------------SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR------SAEAW 72 (136)
T ss_dssp TCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT------CHHHH
T ss_pred CcHHHHHHHHHHHHHcCCc----------------chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC------chHHH
Confidence 3566777888888776554 3457788999999999999999999999998776 56788
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 253 RGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 253 ~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
..+|.++...|++++|+.+++++++. .+....++..+|.+|...|++++|..++++++++.++
T Consensus 73 ~~l~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 73 YNLGNAYYKQGDYDEAIEYYQKALEL------DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR 135 (136)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHh------CCCChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCC
Confidence 99999999999999999999999988 5666788999999999999999999999999987654
No 55
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.35 E-value=1.7e-11 Score=107.95 Aligned_cols=124 Identities=14% Similarity=0.044 Sum_probs=108.2
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 253 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~ 253 (322)
+.+.++..|++++...+. +......+++.+|.++...|++++|+..|++++++.+. ...++.
T Consensus 20 ~~~~A~~~~~~~~~~~~~------------~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~------~~~~~~ 81 (275)
T 1xnf_A 20 QQEVILARMEQILASRAL------------TDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD------MPEVFN 81 (275)
T ss_dssp HHHHHHHHHHHHHTSSCC------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC------CHHHHH
T ss_pred hHHHHHHHHHHHHhcccc------------cCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC------cHHHHH
Confidence 566778888888775322 23446788999999999999999999999999999877 678899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 254 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 254 ~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
++|.++...|++++|+.+|++++++ .|....++.++|.+|...|++++|..+|++++++.++
T Consensus 82 ~la~~~~~~~~~~~A~~~~~~al~~------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 143 (275)
T 1xnf_A 82 YLGIYLTQAGNFDAAYEAFDSVLEL------DPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPN 143 (275)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH------CTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHccCHHHHHHHHHHHHhc------CccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999998 6767889999999999999999999999999987653
No 56
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.34 E-value=2.7e-11 Score=98.48 Aligned_cols=132 Identities=18% Similarity=0.162 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 020735 161 RVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 240 (322)
Q Consensus 161 ~l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~ 240 (322)
.+...........+.+.++..|++++...+. ....++.+|.++...|++++|+..+++++++.+
T Consensus 15 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~----------------~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~ 78 (166)
T 1a17_A 15 ELKTQANDYFKAKDYENAIKFYSQAIELNPS----------------NAIYYGNRSLAYLRTECYGYALGDATRAIELDK 78 (166)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCC----------------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 4444444555555788899999999988766 466888999999999999999999999999987
Q ss_pred hCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHH--HHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020735 241 NVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAY--GAIADCYTELGDLERAARFYDKYISR 318 (322)
Q Consensus 241 ~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~--~~Lg~~y~~~gd~e~A~~~~~kAl~i 318 (322)
. ...+++++|.++...|++++|+.+|++++++ .+....++ ..++..+...|++++|+..++++..+
T Consensus 79 ~------~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~------~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 79 K------YIKGYYRRAASNMALGKFRAALRDYETVVKV------KPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp T------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------STTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c------cHHHHHHHHHHHHHhccHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 7 6788999999999999999999999999988 55545555 55555688999999999999998877
Q ss_pred hh
Q 020735 319 LE 320 (322)
Q Consensus 319 ~e 320 (322)
.+
T Consensus 147 ~~ 148 (166)
T 1a17_A 147 VD 148 (166)
T ss_dssp HH
T ss_pred hc
Confidence 64
No 57
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.34 E-value=2.8e-11 Score=99.44 Aligned_cols=120 Identities=22% Similarity=0.220 Sum_probs=106.2
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 253 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~ 253 (322)
+.+.++..+++++...+. ....+..+|.++...|++++|+.+++++++..+. ...++.
T Consensus 57 ~~~~A~~~~~~~~~~~~~----------------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~ 114 (186)
T 3as5_A 57 AVDRGTELLERSLADAPD----------------NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPI------NFNVRF 114 (186)
T ss_dssp CHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT------CHHHHH
T ss_pred CHHHHHHHHHHHHhcCCC----------------CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcH------hHHHHH
Confidence 567778888888877655 4567888999999999999999999999998776 567899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 254 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 254 ~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
.+|.++...|++++|+++++++++. .+....++..+|.+|...|++++|..++++++++.++
T Consensus 115 ~~a~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 176 (186)
T 3as5_A 115 RLGVALDNLGRFDEAIDSFKIALGL------RPNEGKVHRAIAFSYEQMGRHEEALPHFKKANELDEG 176 (186)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCcHHHHHHHHHHHHhc------CccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999988 6666889999999999999999999999999987654
No 58
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.34 E-value=2.6e-11 Score=94.00 Aligned_cols=105 Identities=18% Similarity=0.236 Sum_probs=95.7
Q ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC
Q 020735 205 KKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGE 284 (322)
Q Consensus 205 ~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d 284 (322)
.......++.+|..+...|++++|+..++++++..+. ...++.++|.++...|++++|+.+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~------ 75 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPA------NAVYFCNRAAAYSKLGNYAGAVQDCERAICI------ 75 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC------CHHHHHHHHHHHHHhhchHHHHHHHHHHHhc------
Confidence 4456778899999999999999999999999998776 5778999999999999999999999999998
Q ss_pred CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 285 YSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 285 ~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
.+....+++.+|.+|...|++++|..+|++++++.++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~ 112 (131)
T 2vyi_A 76 DPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPD 112 (131)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred CccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCcc
Confidence 6667889999999999999999999999999987653
No 59
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.34 E-value=3e-11 Score=104.91 Aligned_cols=118 Identities=14% Similarity=0.153 Sum_probs=104.3
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 253 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~ 253 (322)
+.+.++..+++++...+. ....+..+|.++...|++++|+..|++++++.+. ...++.
T Consensus 120 ~~~~a~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~ 177 (258)
T 3uq3_A 120 NAEKELKKAEAEAYVNPE----------------KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE------DARGYS 177 (258)
T ss_dssp HHHHHHHHHHHHHHCCHH----------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHH
T ss_pred HHHHHHHHHHHHHHcCcc----------------hHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc------cHHHHH
Confidence 455555566665555444 6778899999999999999999999999999887 678899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 020735 254 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRL 319 (322)
Q Consensus 254 ~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~ 319 (322)
++|.++...|++++|+.++++++++ .+..+.++..+|.+|...|++++|..+|++++++.
T Consensus 178 ~l~~~~~~~~~~~~A~~~~~~al~~------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 178 NRAAALAKLMSFPEAIADCNKAIEK------DPNFVRAYIRKATAQIAVKEYASALETLDAARTKD 237 (258)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHh------CHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC
Confidence 9999999999999999999999998 77778999999999999999999999999999987
No 60
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.34 E-value=1.2e-11 Score=96.88 Aligned_cols=105 Identities=14% Similarity=0.073 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHH
Q 020735 211 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTE 290 (322)
Q Consensus 211 ~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~ 290 (322)
.++.+|..++..|++++|+..|+++++..+. ......+++++|.++...|++++|+.+|+++++..+ +.+..+.
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~---~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p---~~~~~~~ 77 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPN---GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYP---THDKAAG 77 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS---STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---TSTTHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCC---CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCC---CCcccHH
Confidence 4678899999999999999999999998775 222347899999999999999999999999998821 2222388
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 291 AYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 291 a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
+++.+|.+|..+|++++|+.+|+++++..++
T Consensus 78 ~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~ 108 (129)
T 2xev_A 78 GLLKLGLSQYGEGKNTEAQQTLQQVATQYPG 108 (129)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC
Confidence 9999999999999999999999999987654
No 61
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.33 E-value=1.1e-12 Score=107.76 Aligned_cols=96 Identities=11% Similarity=0.115 Sum_probs=86.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHH
Q 020735 214 KTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYG 293 (322)
Q Consensus 214 ~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~ 293 (322)
.+|.++...|++++|+..+++++...++ ...+++++|.+|+..|+|++|+++|++++++ +|..+.+++
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~~p~------~~~~~~~la~~y~~~~~~~~A~~~~~~al~~------~p~~~~a~~ 69 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPSPRQ------KSIKGFYFAKLYYEAKEYDLAKKYICTYINV------QERDPKAHR 69 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCSHHH------HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHH
T ss_pred HhHHHHHHcChHHHHHHHHHHhcccCcc------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHH
Confidence 3788888999999999999999998887 8888999999999999999999999999999 888899999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 294 AIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 294 ~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
++|.+|...|++++|+.+|++++++.++
T Consensus 70 ~lg~~~~~~~~~~~A~~~~~~al~~~p~ 97 (150)
T 4ga2_A 70 FLGLLYELEENTDKAVECYRRSVELNPT 97 (150)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHcCchHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999998764
No 62
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.33 E-value=4.1e-11 Score=93.01 Aligned_cols=107 Identities=18% Similarity=0.361 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc-CCCc
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISERE-GEYS 286 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~-~d~~ 286 (322)
.+..++.+|..+...|++++|+.+|+++++..+. ...+++++|.++...|++++|+.++++++++.+.. .+..
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 76 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPT------NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYR 76 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc------cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHH
Confidence 4567889999999999999999999999998876 57889999999999999999999999999997654 2233
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 287 GSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 287 ~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
....+++++|.+|...|++++|..+|++++++.+
T Consensus 77 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 110 (131)
T 1elr_A 77 QIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR 110 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 3478999999999999999999999999998654
No 63
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.33 E-value=4e-11 Score=98.46 Aligned_cols=123 Identities=14% Similarity=0.122 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHH
Q 020735 170 NAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEK 249 (322)
Q Consensus 170 ~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~ 249 (322)
....+.+.++..+++++...+. ....+..+|.++...|++++|+.+++++++..+. ..
T Consensus 19 ~~~~~~~~A~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~------~~ 76 (186)
T 3as5_A 19 AKAGRYSQAVMLLEQVYDADAF----------------DVDVALHLGIAYVKTGAVDRGTELLERSLADAPD------NV 76 (186)
T ss_dssp HHHTCHHHHHHHHTTTCCTTSC----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CH
T ss_pred HHhcCHHHHHHHHHHHHHhCcc----------------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC------CH
Confidence 3334667777778777766554 3567889999999999999999999999998776 67
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 250 KAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 250 ~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
.++..+|.++...|++++|+++++++++. .+....++..+|.+|...|++++|..+++++++..+
T Consensus 77 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~ 141 (186)
T 3as5_A 77 KVATVLGLTYVQVQKYDLAVPLLIKVAEA------NPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRP 141 (186)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhc------CcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCc
Confidence 78999999999999999999999999998 666778999999999999999999999999998754
No 64
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.33 E-value=2.6e-11 Score=98.59 Aligned_cols=104 Identities=15% Similarity=0.176 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCC
Q 020735 206 KEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEY 285 (322)
Q Consensus 206 ~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~ 285 (322)
...+..++.+|..++..|++++|+..|++++++.+. ...++.++|.++...|++++|+.++++++++ .
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~------~ 77 (166)
T 1a17_A 10 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS------NAIYYGNRSLAYLRTECYGYALGDATRAIEL------D 77 (166)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------C
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------C
Confidence 346778899999999999999999999999998887 6788999999999999999999999999999 7
Q ss_pred chHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 286 SGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 286 ~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
+....+++++|.+|...|++++|..+|++++++.++
T Consensus 78 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~ 113 (166)
T 1a17_A 78 KKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPH 113 (166)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred cccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 777889999999999999999999999999987654
No 65
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.33 E-value=2e-11 Score=105.33 Aligned_cols=101 Identities=16% Similarity=0.192 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHH----------------HHHHHHHcCCHHHHHHHH
Q 020735 209 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARG----------------LGASLQRQGKYREAIKYH 272 (322)
Q Consensus 209 a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~----------------LG~~~~~~gd~~eAi~~~ 272 (322)
+..++..|..++..|++++|+..|++++++.|. ...++++ +|.+|...|++++|+..|
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~ 77 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNID------RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFY 77 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH------HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC------ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 446778999999999999999999999999988 7888888 999999999999999999
Q ss_pred HHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 273 SMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 273 ~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
++++++ +|..+.+++++|.+|...|++++|+.+|++++++.++
T Consensus 78 ~~al~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~ 120 (208)
T 3urz_A 78 KELLQK------APNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEAD 120 (208)
T ss_dssp HHHHHH------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHH------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 999999 8888999999999999999999999999999987654
No 66
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.32 E-value=2.1e-11 Score=108.06 Aligned_cols=142 Identities=14% Similarity=0.119 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 020735 161 RVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 240 (322)
Q Consensus 161 ~l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~ 240 (322)
.+...........+.+.++..|++++...|.. .....+++.+|.+|+..|++++|+..|++++++.|
T Consensus 17 ~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~-------------~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p 83 (261)
T 3qky_A 17 EAFERAMEFYNQGKYDRAIEYFKAVFTYGRTH-------------EWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQ 83 (261)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCS-------------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCC-------------cchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCC
Confidence 34444555555668889999999999987650 01366889999999999999999999999999877
Q ss_pred hCCChHHHHHHHHHHHHHHHH--------cCCHHHHHHHHHHHHHHHHHcCCCchHHHHH--------------HHHHHH
Q 020735 241 NVKDPIEEKKAARGLGASLQR--------QGKYREAIKYHSMVLQISEREGEYSGSTEAY--------------GAIADC 298 (322)
Q Consensus 241 ~~~d~~~~~~a~~~LG~~~~~--------~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~--------------~~Lg~~ 298 (322)
... ....+++.+|.++.. .|++++|+..|+++++..+ +.+....+. +.+|.+
T Consensus 84 ~~~---~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p---~~~~~~~a~~~~~~~~~~~~~~~~~la~~ 157 (261)
T 3qky_A 84 IDP---RVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYP---NHELVDDATQKIRELRAKLARKQYEAARL 157 (261)
T ss_dssp TCT---THHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCT---TCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCc---hhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCc---CchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 532 256789999999999 9999999999999998832 222333444 899999
Q ss_pred HHHcCCHHHHHHHHHHHHHhhhc
Q 020735 299 YTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 299 y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
|...|++++|+..|+++++..++
T Consensus 158 ~~~~g~~~~A~~~~~~~l~~~p~ 180 (261)
T 3qky_A 158 YERRELYEAAAVTYEAVFDAYPD 180 (261)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHccCHHHHHHHHHHHHHHCCC
Confidence 99999999999999999987653
No 67
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.32 E-value=2.9e-11 Score=112.54 Aligned_cols=147 Identities=20% Similarity=0.221 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 020735 161 RVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 240 (322)
Q Consensus 161 ~l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~ 240 (322)
.+.+.........+.+.++..|++++...+....... +.........+.+++++|.+|...|++++|+.+|++++++.+
T Consensus 149 ~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~-~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p 227 (336)
T 1p5q_A 149 IVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSN-EEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDS 227 (336)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCS-HHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCCh-HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 4455555666666889999999999998876211000 000001122357889999999999999999999999999988
Q ss_pred hCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHhh
Q 020735 241 NVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERA-ARFYDKYISRL 319 (322)
Q Consensus 241 ~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A-~~~~~kAl~i~ 319 (322)
. ...+++++|.+|..+|++++|+.+|++++++ .|....++.++|.++..+|++++| ...|++.++.+
T Consensus 228 ~------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l------~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~~ 295 (336)
T 1p5q_A 228 N------NEKGLSRRGEAHLAVNDFELARADFQKVLQL------YPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERL 295 (336)
T ss_dssp T------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C------cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7 7889999999999999999999999999999 788889999999999999999999 66788887654
Q ss_pred h
Q 020735 320 E 320 (322)
Q Consensus 320 e 320 (322)
.
T Consensus 296 ~ 296 (336)
T 1p5q_A 296 A 296 (336)
T ss_dssp H
T ss_pred h
Confidence 3
No 68
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.32 E-value=1e-11 Score=97.12 Aligned_cols=103 Identities=17% Similarity=0.214 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCc
Q 020735 207 EELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYS 286 (322)
Q Consensus 207 ~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~ 286 (322)
....+++.+|..+...|++++|+..|+++++..+. ...+++++|.++...|++++|+.++++++++ .+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~------~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~------~~ 81 (133)
T 2lni_A 14 DLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK------DAKLYSNRAACYTKLLEFQLALKDCEECIQL------EP 81 (133)
T ss_dssp CHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT------CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHH------CT
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC------cHHHHHHHHHHHHHhccHHHHHHHHHHHHHh------CC
Confidence 36778899999999999999999999999998776 5788999999999999999999999999998 67
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 287 GSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 287 ~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
....+++++|.+|...|++++|..+|++++++.+.
T Consensus 82 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~ 116 (133)
T 2lni_A 82 TFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSS 116 (133)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGG
T ss_pred CchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCC
Confidence 77889999999999999999999999999987543
No 69
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.31 E-value=8.8e-11 Score=115.17 Aligned_cols=145 Identities=9% Similarity=-0.054 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCC-cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC--
Q 020735 166 LRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDP-KKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV-- 242 (322)
Q Consensus 166 l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~-~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~-- 242 (322)
......++++++++..|++++..... ..++ ....+.++.++|.+|..+|+|++|+.++++++++....
T Consensus 316 a~~~~~qg~~~eA~~l~~~aL~~~~~---------~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG 386 (490)
T 3n71_A 316 IDKARSEGLYHEVVKLCRECLEKQEP---------VFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYH 386 (490)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHTT---------TBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcC
Confidence 33334444678899999999987655 2333 34567789999999999999999999999999998764
Q ss_pred CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc--CCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 020735 243 KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISERE--GEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRL 319 (322)
Q Consensus 243 ~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~--~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~ 319 (322)
.+.+..+.++++||.+|..+|+|++|+.+|++|+++.+.. .++|.......+++.++.+++.+++|...|.++.+.+
T Consensus 387 ~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 387 HNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667789999999999999999999999999999999985 5788899999999999999999999999999997755
No 70
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.30 E-value=1.5e-11 Score=114.44 Aligned_cols=108 Identities=11% Similarity=0.150 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCC---------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKD---------PIEEKKAARGLGASLQRQGKYREAIKYHSMVLQI 278 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d---------~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l 278 (322)
.+..+..+|.+|+..|++++|+..|++++++.+...+ ......+++++|.+|..+|+|++|+.+|++++++
T Consensus 146 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 225 (336)
T 1p5q_A 146 QSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALEL 225 (336)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 6778899999999999999999999999999887431 1223678999999999999999999999999999
Q ss_pred HHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 279 SEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 279 ~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
.|..+.+++++|.+|..+|++++|+.+|++++++.++
T Consensus 226 ------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~ 262 (336)
T 1p5q_A 226 ------DSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPN 262 (336)
T ss_dssp ------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS
T ss_pred ------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
Confidence 7888999999999999999999999999999987653
No 71
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.29 E-value=2.8e-11 Score=103.01 Aligned_cols=110 Identities=20% Similarity=0.233 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCh----------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 020735 206 KEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDP----------IEEKKAARGLGASLQRQGKYREAIKYHSMV 275 (322)
Q Consensus 206 ~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~----------~~~~~a~~~LG~~~~~~gd~~eAi~~~~ka 275 (322)
...+..+..+|..++..|+|++|+..|++++++.+...+. .....++.++|.++...|++++|+.+++++
T Consensus 35 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 114 (198)
T 2fbn_A 35 VQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKV 114 (198)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 3466788899999999999999999999999987764321 112478999999999999999999999999
Q ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 276 LQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 276 L~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
+++ .+....+++++|.+|..+|++++|+.+|++++++.++
T Consensus 115 l~~------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 154 (198)
T 2fbn_A 115 LKI------DKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPN 154 (198)
T ss_dssp HHH------STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred HHh------CcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC
Confidence 999 7778899999999999999999999999999987653
No 72
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=2.6e-11 Score=96.67 Aligned_cols=105 Identities=19% Similarity=0.232 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCch
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 287 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~ 287 (322)
.+..++.+|..++..|++++|+.+|++++++.+. ......++.++|.++...|++++|+.++++++++ .+.
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~---~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~------~~~ 97 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDAT---PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEK------DGG 97 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC---HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------TSC
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc---chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh------Ccc
Confidence 5678889999999999999999999999987654 2334788999999999999999999999999998 666
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 288 STEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 288 ~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
...+++++|.+|...|++++|..+|++++++.++
T Consensus 98 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~ 131 (148)
T 2dba_A 98 DVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPK 131 (148)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSS
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 7889999999999999999999999999987654
No 73
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.28 E-value=5.5e-10 Score=103.64 Aligned_cols=136 Identities=11% Similarity=-0.033 Sum_probs=91.0
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 253 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~ 253 (322)
+.+.++..+++++...+. ++....+.++..+|.++...|++++|...+++++++.+..++......++.
T Consensus 29 ~~~~A~~~~~~al~~~~~-----------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 97 (373)
T 1hz4_A 29 NPDEAERLAKLALEELPP-----------GWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLI 97 (373)
T ss_dssp CHHHHHHHHHHHHHTCCT-----------TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCC-----------CchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 445566666666655432 122234445666777777777777777777777777777766666666677
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCC--chHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 254 GLGASLQRQGKYREAIKYHSMVLQISEREGEY--SGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 254 ~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~--~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
++|.++...|++++|+.++++++++.++.++. +....++.++|.+|...|++++|..++++++++.+
T Consensus 98 ~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 166 (373)
T 1hz4_A 98 QQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLS 166 (373)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Confidence 77777777777777777777777776665543 45566677777777777777777777777776543
No 74
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.28 E-value=8.4e-11 Score=90.25 Aligned_cols=102 Identities=26% Similarity=0.461 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCch
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 287 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~ 287 (322)
....++.+|..+...|++++|+..++++++..+. ...++..+|.++...|++++|+.+++++++. .+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~------~~~ 75 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN------NAEAWYNLGNAYYKQGDYDEAIEYYQKALEL------DPN 75 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTT
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC------cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh------CCc
Confidence 3567888999999999999999999999998775 5678999999999999999999999999988 666
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 288 STEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 288 ~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
...++..+|.+|...|++++|..++++++++.++
T Consensus 76 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 109 (125)
T 1na0_A 76 NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN 109 (125)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC
Confidence 6788999999999999999999999999987653
No 75
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.27 E-value=1.3e-10 Score=98.67 Aligned_cols=121 Identities=21% Similarity=0.205 Sum_probs=102.3
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRN-QDLEKAFTEFKAALELAQNVKDPIEEKKAA 252 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~-g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~ 252 (322)
+.+.++..+++++...+. ....+..+|.++... |++++|+..++++++ .+ .......++
T Consensus 57 ~~~~A~~~~~~a~~~~~~----------------~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~-~~---~~~~~~~~~ 116 (225)
T 2vq2_A 57 VNDKAQESFRQALSIKPD----------------SAEINNNYGWFLCGRLNRPAESMAYFDKALA-DP---TYPTPYIAN 116 (225)
T ss_dssp CHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHT-ST---TCSCHHHHH
T ss_pred ChHHHHHHHHHHHHhCCC----------------ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHc-Cc---CCcchHHHH
Confidence 667888888888887665 455788899999999 999999999999988 21 122256788
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 253 RGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 253 ~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
.++|.++...|++++|+.+++++++. .+....++..+|.+|...|++++|..+++++++..+
T Consensus 117 ~~l~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 178 (225)
T 2vq2_A 117 LNKGICSAKQGQFGLAEAYLKRSLAA------QPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVE 178 (225)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH------STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999988 666678899999999999999999999999988765
No 76
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.27 E-value=1e-11 Score=96.95 Aligned_cols=89 Identities=17% Similarity=0.185 Sum_probs=78.0
Q ss_pred HcCCHHHHHHHHHHHHHH---HHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHH
Q 020735 221 RNQDLEKAFTEFKAALEL---AQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIAD 297 (322)
Q Consensus 221 ~~g~~~~Al~~~~kAl~l---~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~ 297 (322)
..|++++|+.+|++++++ .+. ...++.++|.+|...|++++|+.+|++++++ .|..+.+++++|.
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~------~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~l~~ 69 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD------LAECYLGLGSTFRTLGEYRKAEAVLANGVKQ------FPNHQALRVFYAM 69 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCchHHHHHHHH
Confidence 368999999999999998 566 8899999999999999999999999999999 7778899999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 298 CYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 298 ~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
+|..+|++++|+.+++++++..++
T Consensus 70 ~~~~~g~~~~A~~~~~~al~~~p~ 93 (117)
T 3k9i_A 70 VLYNLGRYEQGVELLLKIIAETSD 93 (117)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHCC
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCC
Confidence 999999999999999999987654
No 77
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.27 E-value=5.2e-11 Score=102.82 Aligned_cols=121 Identities=18% Similarity=0.184 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHH
Q 020735 173 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAA 252 (322)
Q Consensus 173 l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~ 252 (322)
.+.+.++..+++++...+. ....+..+|.++...|++++|+.+++++++..+. ...++
T Consensus 105 ~~~~~A~~~~~~~~~~~~~----------------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~ 162 (243)
T 2q7f_A 105 EMYKEAKDMFEKALRAGME----------------NGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN------DTEAR 162 (243)
T ss_dssp TCHHHHHHHHHHHHHHTCC----------------SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT------CHHHH
T ss_pred ccHHHHHHHHHHHHHhCCC----------------CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc------cHHHH
Confidence 3677888889998887765 3557888999999999999999999999998876 67789
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 253 RGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 253 ~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
..+|.++...|++++|+.+++++++. .+....++..+|.+|...|++++|..+|++++++.++
T Consensus 163 ~~l~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~ 225 (243)
T 2q7f_A 163 FQFGMCLANEGMLDEALSQFAAVTEQ------DPGHADAFYNAGVTYAYKENREKALEMLDKAIDIQPD 225 (243)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh------CcccHHHHHHHHHHHHHccCHHHHHHHHHHHHccCcc
Confidence 99999999999999999999999988 6667789999999999999999999999999987654
No 78
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.26 E-value=1.1e-11 Score=93.86 Aligned_cols=99 Identities=17% Similarity=0.181 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCch--H
Q 020735 211 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG--S 288 (322)
Q Consensus 211 ~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~--~ 288 (322)
.++.+|.++...|++++|+..|++++++.+. ...+++++|.++...|++++|+.++++++++ .+. .
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~------~~~~~~ 75 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQLDPE------ESKYWLMKGKALYNLERYEEAVDCYNYVINV------IEDEYN 75 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHHCCC------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT------SCCTTC
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCcC------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHh------Ccccch
Confidence 5667899999999999999999999998876 5778999999999999999999999999988 666 7
Q ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhhhc
Q 020735 289 TEAYGAIADCYTEL-GDLERAARFYDKYISRLES 321 (322)
Q Consensus 289 a~a~~~Lg~~y~~~-gd~e~A~~~~~kAl~i~e~ 321 (322)
..++.++|.+|... |++++|.+++++++...+.
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~ 109 (112)
T 2kck_A 76 KDVWAAKADALRYIEGKEVEAEIAEARAKLEHHH 109 (112)
T ss_dssp HHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCC
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccC
Confidence 88999999999999 9999999999999877653
No 79
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.26 E-value=1.1e-10 Score=100.68 Aligned_cols=119 Identities=16% Similarity=0.188 Sum_probs=106.1
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 253 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~ 253 (322)
+.+.++..+++++...+. ...++..+|.++...|++++|+..++++++..+. ...++.
T Consensus 72 ~~~~A~~~~~~~~~~~~~----------------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~ 129 (243)
T 2q7f_A 72 ELERALAFYDKALELDSS----------------AATAYYGAGNVYVVKEMYKEAKDMFEKALRAGME------NGDLFY 129 (243)
T ss_dssp CHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCC------SHHHHH
T ss_pred CHHHHHHHHHHHHHcCCc----------------chHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC------CHHHHH
Confidence 566778888888887665 4667888999999999999999999999998876 577899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 254 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 254 ~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
.+|.++...|++++|+.+++++++. .+....++..+|.+|...|++++|+.+++++++..+
T Consensus 130 ~~a~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~ 190 (243)
T 2q7f_A 130 MLGTVLVKLEQPKLALPYLQRAVEL------NENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDP 190 (243)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHh------CCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 9999999999999999999999988 666778999999999999999999999999998754
No 80
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.25 E-value=1.6e-10 Score=90.70 Aligned_cols=120 Identities=10% Similarity=0.044 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 020735 161 RVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 240 (322)
Q Consensus 161 ~l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~ 240 (322)
.+.+.+.......+.+.++..|++++...|. ....+.++|.+|...|++++|+..+++++++.+
T Consensus 6 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~----------------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p 69 (126)
T 3upv_A 6 EARLEGKEYFTKSDWPNAVKAYTEMIKRAPE----------------DARGYSNRAAALAKLMSFPEAIADCNKAIEKDP 69 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC----------------ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC
Confidence 4455555666666889999999999998877 567899999999999999999999999999988
Q ss_pred hCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHc
Q 020735 241 NVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTEL 302 (322)
Q Consensus 241 ~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~ 302 (322)
. ...+++++|.++...|++++|+.+|++++++.+...+.|....++..++.+...+
T Consensus 70 ~------~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 70 N------FVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp T------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred C------cHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 7 7889999999999999999999999999999665555588888888888877654
No 81
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.25 E-value=7.5e-11 Score=108.92 Aligned_cols=127 Identities=15% Similarity=0.214 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHH-----
Q 020735 173 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIE----- 247 (322)
Q Consensus 173 l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~----- 247 (322)
.+.+.++..|++++...|. ...++..+|.+|...|++++|+..|++++++.+...+...
T Consensus 113 g~~~~A~~~~~~al~~~p~----------------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 176 (365)
T 4eqf_A 113 ENEQAAIVALQRCLELQPN----------------NLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGS 176 (365)
T ss_dssp TCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------
T ss_pred CCHHHHHHHHHHHHhcCCC----------------CHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccc
Confidence 3566777777777776655 3556677777777777777777777777776554221110
Q ss_pred -----------------------------------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHH
Q 020735 248 -----------------------------------EKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAY 292 (322)
Q Consensus 248 -----------------------------------~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~ 292 (322)
...++.++|.++...|++++|+++|++++++ .|..+.++
T Consensus 177 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~ 250 (365)
T 4eqf_A 177 PGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTV------RPEDYSLW 250 (365)
T ss_dssp ------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------CTTCHHHH
T ss_pred hHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh------CCCCHHHH
Confidence 3457888899999999999999999999888 66677888
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 293 GAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 293 ~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
.++|.+|...|++++|+.+|++++++.++
T Consensus 251 ~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 279 (365)
T 4eqf_A 251 NRLGATLANGDRSEEAVEAYTRALEIQPG 279 (365)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 88999999999999999999988876543
No 82
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.25 E-value=1.5e-11 Score=116.85 Aligned_cols=120 Identities=8% Similarity=0.022 Sum_probs=112.2
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCChHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQD-LEKAFTEFKAALELAQNVKDPIEEKKAA 252 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~-~~~Al~~~~kAl~l~~~~~d~~~~~~a~ 252 (322)
+.+.++..|++++...|. ...+++++|.++...|+ +++|+..|++++++.++ ...++
T Consensus 112 ~~~~Al~~~~~al~l~P~----------------~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~------~~~a~ 169 (382)
T 2h6f_A 112 RSERAFKLTRDAIELNAA----------------NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK------NYQVW 169 (382)
T ss_dssp CCHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT------CHHHH
T ss_pred ChHHHHHHHHHHHHhCcc----------------CHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCC------CHHHH
Confidence 567799999999999988 67799999999999997 99999999999999998 88999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 253 RGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 253 ~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
+++|.++..+|++++|+.+|++++++ +|....+|+++|.++..+|++++|+.+|++++++.+.
T Consensus 170 ~~~g~~~~~~g~~~eAl~~~~kal~l------dP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~ 232 (382)
T 2h6f_A 170 HHRRVLVEWLRDPSQELEFIADILNQ------DAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVR 232 (382)
T ss_dssp HHHHHHHHHHTCCTTHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHh------CccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999 8889999999999999999999999999999988654
No 83
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.25 E-value=1.3e-11 Score=108.87 Aligned_cols=97 Identities=13% Similarity=0.196 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHH
Q 020735 211 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTE 290 (322)
Q Consensus 211 ~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~ 290 (322)
++..+|.+|...|++++|+.+|++++++.+. ...++.++|.+|...|++++|+.+|++++++ .+....
T Consensus 76 ~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~------~~~~~~ 143 (272)
T 3u4t_A 76 DFEYYGKILMKKGQDSLAIQQYQAAVDRDTT------RLDMYGQIGSYFYNKGNFPLAIQYMEKQIRP------TTTDPK 143 (272)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CTHHHHHHHHHHHHTTCHHHHHHHHGGGCCS------SCCCHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhcCcc------cHHHHHHHHHHHHHccCHHHHHHHHHHHhhc------CCCcHH
Confidence 4455555555555555555555555555444 3345555555555555555555555555544 444445
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 020735 291 AYGAIADCYTELGDLERAARFYDKYISRL 319 (322)
Q Consensus 291 a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~ 319 (322)
+++++|......+++++|+.+|++++++.
T Consensus 144 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 172 (272)
T 3u4t_A 144 VFYELGQAYYYNKEYVKADSSFVKVLELK 172 (272)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 55555522222335555555555555544
No 84
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.25 E-value=3.9e-11 Score=108.07 Aligned_cols=126 Identities=21% Similarity=0.294 Sum_probs=103.8
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCh---HHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDP---IEEKK 250 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~---~~~~~ 250 (322)
+.+.++..+++++...+. ....+..+|.++...|++++|+..+++++++.+..++. .....
T Consensus 174 ~~~~A~~~~~~al~~~~~----------------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 237 (330)
T 3hym_B 174 NSKLAERFFSQALSIAPE----------------DPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEP 237 (330)
T ss_dssp CHHHHHHHHHHHHTTCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCH
T ss_pred hHHHHHHHHHHHHHhCCC----------------ChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHH
Confidence 556677777777776655 45678889999999999999999999999988665443 22456
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 251 AARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 251 a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
++.++|.++...|++++|+.++++++++ .+....++.++|.+|...|++++|.++|++++++.++
T Consensus 238 ~~~~la~~~~~~g~~~~A~~~~~~a~~~------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 302 (330)
T 3hym_B 238 LLNNLGHVCRKLKKYAEALDYHRQALVL------IPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRD 302 (330)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH------STTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhh------CccchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCC
Confidence 8889999999999999999999999988 6667788999999999999999999999999876653
No 85
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.24 E-value=1.3e-10 Score=107.35 Aligned_cols=130 Identities=13% Similarity=0.101 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHH
Q 020735 170 NAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEK 249 (322)
Q Consensus 170 ~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~ 249 (322)
....+.+.++..|++++...|. ...+++.+|.+|...|++++|+..|++++++.+. ..
T Consensus 76 ~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~------~~ 133 (365)
T 4eqf_A 76 LKEGDLPVTILFMEAAILQDPG----------------DAEAWQFLGITQAENENEQAAIVALQRCLELQPN------NL 133 (365)
T ss_dssp HHHTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CH
T ss_pred HHCCCHHHHHHHHHHHHHhCcC----------------CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC------CH
Confidence 3344677788899999988776 5678899999999999999999999999999887 67
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCC--------------------------------------ch--HH
Q 020735 250 KAARGLGASLQRQGKYREAIKYHSMVLQISEREGEY--------------------------------------SG--ST 289 (322)
Q Consensus 250 ~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~--------------------------------------~~--~a 289 (322)
.++.++|.+|...|++++|+.+|++++++.+..... |. .+
T Consensus 134 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 213 (365)
T 4eqf_A 134 KALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDP 213 (365)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCCH
T ss_pred HHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCH
Confidence 889999999999999999999999999875442211 11 46
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 290 EAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 290 ~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
.++.++|.+|...|++++|+.+|++++++.++
T Consensus 214 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 245 (365)
T 4eqf_A 214 DLQTGLGVLFHLSGEFNRAIDAFNAALTVRPE 245 (365)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC
Confidence 78889999999999999999999999887543
No 86
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.24 E-value=4.8e-11 Score=116.17 Aligned_cols=127 Identities=7% Similarity=-0.069 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHc---------CCHHHHHHHHHHHH
Q 020735 166 LRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRN---------QDLEKAFTEFKAAL 236 (322)
Q Consensus 166 l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~---------g~~~~Al~~~~kAl 236 (322)
........+.+.++..|++++...|. ..++..+|.+|... |++++|+..|++++
T Consensus 144 g~~~~~~g~~~~A~~~~~~al~~~p~-----------------~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al 206 (474)
T 4abn_A 144 GEVYWKKGDVTSAHTCFSGALTHCKN-----------------KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAV 206 (474)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHTTCCC-----------------HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhhCCC-----------------HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHH
Confidence 33344444778888889988876643 36888999999999 99999999999999
Q ss_pred HHHHhCCChHHHHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHHHHHHcCCCc---hHHHHHHHHHHHHHHcCCH
Q 020735 237 ELAQNVKDPIEEKKAARGLGASLQRQ--------GKYREAIKYHSMVLQISEREGEYS---GSTEAYGAIADCYTELGDL 305 (322)
Q Consensus 237 ~l~~~~~d~~~~~~a~~~LG~~~~~~--------gd~~eAi~~~~kaL~l~~~~~d~~---~~a~a~~~Lg~~y~~~gd~ 305 (322)
++.+. ...+++++|.+|... |++++|+.+|++++++ .| ..+.+++++|.+|..+|++
T Consensus 207 ~~~p~------~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~~~~lg~~~~~~g~~ 274 (474)
T 4abn_A 207 QMDVL------DGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKV------DRKASSNPDLHLNRATLHKYEESY 274 (474)
T ss_dssp HHCTT------CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH------CGGGGGCHHHHHHHHHHHHHTTCH
T ss_pred HhCCC------CHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHh------CCCcccCHHHHHHHHHHHHHcCCH
Confidence 99988 788999999999999 9999999999999999 77 8899999999999999999
Q ss_pred HHHHHHHHHHHHhhhc
Q 020735 306 ERAARFYDKYISRLES 321 (322)
Q Consensus 306 e~A~~~~~kAl~i~e~ 321 (322)
++|.++|++++++.++
T Consensus 275 ~~A~~~~~~al~l~p~ 290 (474)
T 4abn_A 275 GEALEGFSQAAALDPA 290 (474)
T ss_dssp HHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHhCCC
Confidence 9999999999987654
No 87
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.24 E-value=1.1e-10 Score=115.44 Aligned_cols=124 Identities=14% Similarity=0.042 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHH
Q 020735 170 NAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEK 249 (322)
Q Consensus 170 ~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~ 249 (322)
....+.+++++.|++++...+. ...+++.+|.+|...|++++|+.+|++++++.+. ..
T Consensus 34 ~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~------~~ 91 (568)
T 2vsy_A 34 LGMGDTTAGEMAVQRGLALHPG----------------HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPE------HP 91 (568)
T ss_dssp HHHTCHHHHHHHHHHHHTTSTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CH
T ss_pred HHcCCHHHHHHHHHHHHHhCCC----------------CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC------CH
Confidence 3344778899999999998776 5678899999999999999999999999999887 68
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHhhhc
Q 020735 250 KAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTEL---GDLERAARFYDKYISRLES 321 (322)
Q Consensus 250 ~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~---gd~e~A~~~~~kAl~i~e~ 321 (322)
.+++++|.+|...|++++|+++|++++++ .+....++.++|.+|..+ |++++|.++|+++++..++
T Consensus 92 ~~~~~la~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~ 160 (568)
T 2vsy_A 92 GIALWLGHALEDAGQAEAAAAAYTRAHQL------LPEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVG 160 (568)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCc
Confidence 89999999999999999999999999999 777789999999999999 9999999999999987653
No 88
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.24 E-value=1.6e-10 Score=106.10 Aligned_cols=128 Identities=17% Similarity=0.150 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHH
Q 020735 168 QINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIE 247 (322)
Q Consensus 168 ~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~ 247 (322)
......+.+.++..|++++...+. .. ....+..+|.+|...|++++|+..|++++++.+.
T Consensus 190 ~~~~~~~~~~A~~~~~~a~~~~p~----------~~----~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~------ 249 (368)
T 1fch_A 190 SLLSDSLFLEVKELFLAAVRLDPT----------SI----DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN------ 249 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTT----------SC----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------
T ss_pred HHhhcccHHHHHHHHHHHHHhCcC----------cc----cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC------
Confidence 334445778888899999887765 10 3557888999999999999999999999999877
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 248 EKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 248 ~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
...++.++|.++...|++++|+.+|++++++ .|....+++++|.+|...|++++|..+|++++++.++
T Consensus 250 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 317 (368)
T 1fch_A 250 DYLLWNKLGATLANGNQSEEAVAAYRRALEL------QPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRK 317 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC
Confidence 6788999999999999999999999999998 7777899999999999999999999999999988654
No 89
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.24 E-value=4e-10 Score=104.57 Aligned_cols=139 Identities=13% Similarity=0.060 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCh--HHH
Q 020735 171 AALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDP--IEE 248 (322)
Q Consensus 171 ~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~--~~~ 248 (322)
...+.+.+...+++++...+. .++....+.++.++|.++...|++++|+.++++++++.+..++. ...
T Consensus 65 ~~g~~~~A~~~~~~al~~~~~----------~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~ 134 (373)
T 1hz4_A 65 CKGELTRSLALMQQTEQMARQ----------HDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMH 134 (373)
T ss_dssp HHTCHHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHH
T ss_pred hcCcHHHHHHHHHHHHHHHHh----------cCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHH
Confidence 334677788888888888776 44555567788999999999999999999999999999887765 557
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 249 KKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 249 ~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
..++.++|.++...|++++|+.++++++++.+..++.. ...++.++|.++...|++++|..++++++++.+
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~ 205 (373)
T 1hz4_A 135 EFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQ-QLQCLAMLIQCSLARGDLDNARSQLNRLENLLG 205 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGG-GHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh
Confidence 77899999999999999999999999999977655433 567899999999999999999999999998753
No 90
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.24 E-value=5.2e-11 Score=115.50 Aligned_cols=109 Identities=11% Similarity=0.100 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCC---------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020735 207 EELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKD---------PIEEKKAARGLGASLQRQGKYREAIKYHSMVLQ 277 (322)
Q Consensus 207 ~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d---------~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~ 277 (322)
..+..+..+|..++..|+|++|+..|++++++.+...+ ......+++++|.+|..+|+|++|+.+|+++++
T Consensus 266 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 266 EQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 46778899999999999999999999999999987431 222367899999999999999999999999999
Q ss_pred HHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 278 ISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 278 l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
+ ++..+.+++++|.+|..+|++++|+.+|++++++.++
T Consensus 346 ~------~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~ 383 (457)
T 1kt0_A 346 L------DSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQ 383 (457)
T ss_dssp H------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC--
T ss_pred c------CCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 9 7888999999999999999999999999999987543
No 91
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.23 E-value=9.8e-11 Score=102.14 Aligned_cols=119 Identities=16% Similarity=0.165 Sum_probs=102.3
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--HHHhCCChHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALE--LAQNVKDPIEEKKA 251 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~--l~~~~~d~~~~~~a 251 (322)
+.+.+++.+++++...+. ....+..+|.+|...|++++|+++++++++ ..+. ...+
T Consensus 86 ~~~~A~~~~~~a~~~~~~----------------~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~------~~~~ 143 (252)
T 2ho1_A 86 EPKLADEEYRKALASDSR----------------NARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPE------RSRV 143 (252)
T ss_dssp CHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTT------HHHH
T ss_pred CHHHHHHHHHHHHHHCcC----------------cHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcc------cHHH
Confidence 678888888888887665 456788899999999999999999999988 3333 6778
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 252 ARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 252 ~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
+.++|.++...|++++|+.+++++++. .+....++..+|.+|...|++++|..+++++++..+
T Consensus 144 ~~~la~~~~~~g~~~~A~~~~~~~~~~------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~ 206 (252)
T 2ho1_A 144 FENLGLVSLQMKKPAQAKEYFEKSLRL------NRNQPSVALEMADLLYKEREYVPARQYYDLFAQGGG 206 (252)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhc------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 999999999999999999999999988 666678899999999999999999999999987654
No 92
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.23 E-value=1.2e-11 Score=125.82 Aligned_cols=126 Identities=17% Similarity=0.072 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCh
Q 020735 166 LRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDP 245 (322)
Q Consensus 166 l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~ 245 (322)
........+.++++..|++++...+. ...+++++|.+|...|++++|+..|++++++.+.
T Consensus 440 a~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~---- 499 (681)
T 2pzi_A 440 VRALLDLGDVAKATRKLDDLAERVGW----------------RWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPG---- 499 (681)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHCC----------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT----
T ss_pred HHHHHhcCCHHHHHHHHHHHhccCcc----------------hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC----
Confidence 33444444788999999999998887 6778999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 246 IEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 246 ~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
...+++++|.++..+|++++ +++|++++++ +|..+.+++++|.+|..+|++++|+.+|++++++.+
T Consensus 500 --~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~------~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P 565 (681)
T 2pzi_A 500 --ELAPKLALAATAELAGNTDE-HKFYQTVWST------NDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSR 565 (681)
T ss_dssp --CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTST
T ss_pred --ChHHHHHHHHHHHHcCChHH-HHHHHHHHHh------CCchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCc
Confidence 78899999999999999999 9999999999 888899999999999999999999999999987654
No 93
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.23 E-value=9.6e-11 Score=105.50 Aligned_cols=130 Identities=13% Similarity=0.138 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHH
Q 020735 170 NAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEK 249 (322)
Q Consensus 170 ~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~ 249 (322)
....+.+.++..|++++...+. ....+..+|.+|...|++++|+..++++++..+. ..
T Consensus 136 ~~~~~~~~A~~~~~~a~~~~~~----------------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~------~~ 193 (330)
T 3hym_B 136 AVESEHDQAMAAYFTAAQLMKG----------------CHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPE------DP 193 (330)
T ss_dssp HHHTCHHHHHHHHHHHHHHTTT----------------CSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT------CH
T ss_pred HHccCHHHHHHHHHHHHHhccc----------------cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCC------Ch
Confidence 3334778888889999888765 3446777999999999999999999999998877 67
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCC---chHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 250 KAARGLGASLQRQGKYREAIKYHSMVLQISEREGEY---SGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 250 ~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~---~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
.++.++|.++...|++++|+.++++++++.+..++. +..+.++.++|.+|...|++++|..+|++++++.++
T Consensus 194 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 268 (330)
T 3hym_B 194 FVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQ 268 (330)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCcc
Confidence 889999999999999999999999999997665543 445678999999999999999999999999987653
No 94
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.23 E-value=3.7e-11 Score=118.91 Aligned_cols=120 Identities=15% Similarity=0.094 Sum_probs=95.9
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 253 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~ 253 (322)
+.++++..|++++...+. ...+++.+|.+|...|++++|+++|++++++.+. ...+++
T Consensus 4 ~~~~A~~~~~~al~~~p~----------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~ 61 (568)
T 2vsy_A 4 DGPRELLQLRAAVRHRPQ----------------DFVAWLMLADAELGMGDTTAGEMAVQRGLALHPG------HPEAVA 61 (568)
T ss_dssp -----------------C----------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT------CHHHHH
T ss_pred cHHHHHHHHHHHHHhCCC----------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHH
Confidence 445677777777776665 5678899999999999999999999999999887 688999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 254 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 254 ~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
++|.+|..+|++++|+++|++++++ .+....+++++|.+|...|++++|.++|++++++.++
T Consensus 62 ~lg~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~ 123 (568)
T 2vsy_A 62 RLGRVRWTQQRHAEAAVLLQQASDA------APEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPE 123 (568)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999 7777899999999999999999999999999987653
No 95
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.22 E-value=2.3e-10 Score=112.23 Aligned_cols=110 Identities=13% Similarity=-0.012 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC--CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc--CCCc
Q 020735 211 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNV--KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISERE--GEYS 286 (322)
Q Consensus 211 ~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~--~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~--~d~~ 286 (322)
..+..+..+..+|+|++|+..+++++++.... .+....+.++.+||.+|..+|+|++|+.++++++++.++. .++|
T Consensus 311 ~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp 390 (490)
T 3n71_A 311 DTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNA 390 (490)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCH
Confidence 44556677889999999999999999998875 4567789999999999999999999999999999999885 5788
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 287 GSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 287 ~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
..+..+++||.+|..+|++++|..+|++|+++.+
T Consensus 391 ~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~ 424 (490)
T 3n71_A 391 QLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILL 424 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999875
No 96
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.21 E-value=1.3e-10 Score=109.82 Aligned_cols=109 Identities=16% Similarity=0.147 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCC----------ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 020735 207 EELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVK----------DPIEEKKAARGLGASLQRQGKYREAIKYHSMVL 276 (322)
Q Consensus 207 ~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~----------d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL 276 (322)
..+..+..+|..++..|+|++|+..|++++++.+... .......++.++|.+|..+|+|++|++++++++
T Consensus 221 ~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al 300 (370)
T 1ihg_A 221 LISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEAL 300 (370)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 3456788999999999999999999999999655421 233467889999999999999999999999999
Q ss_pred HHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 277 QISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 277 ~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
++ .+..+.+++++|.+|..+|++++|+.+|++++++.++
T Consensus 301 ~~------~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~ 339 (370)
T 1ihg_A 301 EI------DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPE 339 (370)
T ss_dssp TT------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred Hh------CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 98 7788999999999999999999999999999988654
No 97
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.21 E-value=2.7e-10 Score=102.37 Aligned_cols=121 Identities=17% Similarity=0.193 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHH
Q 020735 173 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAA 252 (322)
Q Consensus 173 l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~ 252 (322)
.+.+.++..+++++...+. ....+..+|.+|...|++++|+..++++++..+. ...++
T Consensus 152 ~~~~~A~~~~~~~~~~~~~----------------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~ 209 (327)
T 3cv0_A 152 NEYRECRTLLHAALEMNPN----------------DAQLHASLGVLYNLSNNYDSAAANLRRAVELRPD------DAQLW 209 (327)
T ss_dssp HHHHHHHHHHHHHHHHSTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHH
T ss_pred ccHHHHHHHHHHHHhhCCC----------------CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC------cHHHH
Confidence 3667888888888887765 4568889999999999999999999999998876 67789
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 253 RGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 253 ~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
..+|.++...|++++|+.++++++++ .+....++..+|.+|...|++++|..+|++++++.++
T Consensus 210 ~~l~~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 210 NKLGATLANGNRPQEALDAYNRALDI------NPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHc------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 99999999999999999999999998 6777889999999999999999999999999987654
No 98
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.21 E-value=2.2e-10 Score=97.29 Aligned_cols=102 Identities=13% Similarity=0.058 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCc-
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYS- 286 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~- 286 (322)
....+..+|.++...|++++|+.+++++++..+. ...++..+|.++...|++++|+.+++++++. .+
T Consensus 112 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~------~~~ 179 (225)
T 2vq2_A 112 PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQ------FPPAFKELARTKMLAGQLGDADYYFKKYQSR------VEV 179 (225)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------HCS
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CchHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCC
Confidence 4668889999999999999999999999998876 5778999999999999999999999999988 55
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 287 GSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 287 ~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
....++..++.++...|++++|..+++.+++..++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~p~ 214 (225)
T 2vq2_A 180 LQADDLLLGWKIAKALGNAQAAYEYEAQLQANFPY 214 (225)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred CCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCC
Confidence 56677889999999999999999999998876654
No 99
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.21 E-value=1.9e-10 Score=100.28 Aligned_cols=120 Identities=15% Similarity=0.072 Sum_probs=103.1
Q ss_pred HHHHHHHHHHhHhh--hcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHH
Q 020735 174 RRQAKIESYAPSLS--YAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKA 251 (322)
Q Consensus 174 ~~e~al~~y~~al~--~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a 251 (322)
+.+.++..+++++. ..+. ....+..+|.++...|++++|+.+++++++..+. ...+
T Consensus 120 ~~~~A~~~~~~~~~~~~~~~----------------~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~------~~~~ 177 (252)
T 2ho1_A 120 RYEEAYQRLLEASQDTLYPE----------------RSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRN------QPSV 177 (252)
T ss_dssp CHHHHHHHHHHHTTCTTCTT----------------HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC------CHHH
T ss_pred HHHHHHHHHHHHHhCccCcc----------------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc------cHHH
Confidence 44666666666665 2222 5678889999999999999999999999998876 5778
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 252 ARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 252 ~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
+..+|.++...|++++|+.+++++++. .+....++..++.+|...|++++|..++++++++.++
T Consensus 178 ~~~la~~~~~~g~~~~A~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~p~ 241 (252)
T 2ho1_A 178 ALEMADLLYKEREYVPARQYYDLFAQG------GGQNARSLLLGIRLAKVFEDRDTAASYGLQLKRLYPG 241 (252)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTT------SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh------CcCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC
Confidence 999999999999999999999999887 6666788999999999999999999999999988764
No 100
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.21 E-value=6.8e-11 Score=107.09 Aligned_cols=101 Identities=11% Similarity=0.058 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchH
Q 020735 209 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGS 288 (322)
Q Consensus 209 a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~ 288 (322)
+..+..+|..++..|++++|+..|++++++.+. ...+++++|.+|...|++++|+..+++++++ .+..
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~~la~~~~~~~~~~~A~~~~~~al~~------~p~~ 71 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPL------VAVYYTNRALCYLKMQQPEQALADCRRALEL------DGQS 71 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC------CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS------CTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh------CCCC
Confidence 457788999999999999999999999999887 7889999999999999999999999999988 7888
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 289 TEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 289 a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
..+++++|.+|..+|++++|+.+|++++++.++
T Consensus 72 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~ 104 (281)
T 2c2l_A 72 VKAHFFLGQCQLEMESYDEAIANLQRAYSLAKE 104 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc
Confidence 899999999999999999999999999987653
No 101
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.19 E-value=4.1e-10 Score=98.97 Aligned_cols=124 Identities=15% Similarity=0.124 Sum_probs=76.8
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 253 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~ 253 (322)
+.+.++..|++++...+. ...+++.+|.+|...|++++|+..|++++++.+. ......
T Consensus 92 ~~~~A~~~~~~al~~~~~----------------~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~------~~~~~~ 149 (275)
T 1xnf_A 92 NFDAAYEAFDSVLELDPT----------------YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPN------DPFRSL 149 (275)
T ss_dssp CHHHHHHHHHHHHHHCTT----------------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHH
T ss_pred CHHHHHHHHHHHHhcCcc----------------ccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC------ChHHHH
Confidence 556666666666665544 2345666667777777777777777776666554 222222
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHH--------------------------HHHc-CCCc----hHHHHHHHHHHHHHHc
Q 020735 254 GLGASLQRQGKYREAIKYHSMVLQI--------------------------SERE-GEYS----GSTEAYGAIADCYTEL 302 (322)
Q Consensus 254 ~LG~~~~~~gd~~eAi~~~~kaL~l--------------------------~~~~-~d~~----~~a~a~~~Lg~~y~~~ 302 (322)
.++ .....|++++|+..+++++.. ..+. ...+ ..+.++..+|.+|...
T Consensus 150 ~~~-~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 228 (275)
T 1xnf_A 150 WLY-LAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSL 228 (275)
T ss_dssp HHH-HHHHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHH-HHHHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHc
Confidence 222 224446666666666554432 1110 1111 2267899999999999
Q ss_pred CCHHHHHHHHHHHHHhhh
Q 020735 303 GDLERAARFYDKYISRLE 320 (322)
Q Consensus 303 gd~e~A~~~~~kAl~i~e 320 (322)
|++++|..+|++++++.+
T Consensus 229 g~~~~A~~~~~~al~~~p 246 (275)
T 1xnf_A 229 GDLDSATALFKLAVANNV 246 (275)
T ss_dssp TCHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHhCCc
Confidence 999999999999998754
No 102
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.19 E-value=1.1e-10 Score=108.83 Aligned_cols=100 Identities=19% Similarity=0.289 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchH
Q 020735 209 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGS 288 (322)
Q Consensus 209 a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~ 288 (322)
...+..+|.+|...|++++|+..|++++++.|. ...++.++|.++...|++++|+++|++++++ .|..
T Consensus 237 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~------~p~~ 304 (388)
T 1w3b_A 237 AVVHGNLACVYYEQGLIDLAIDTYRRAIELQPH------FPDAYCNLANALKEKGSVAEAEDCYNTALRL------CPTH 304 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS------CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH------CTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------Cccc
Confidence 345566777777777777777777777776555 4556777777777777777777777777776 5555
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 289 TEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 289 a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
+.++.++|.+|...|++++|..+|++++++.+
T Consensus 305 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p 336 (388)
T 1w3b_A 305 ADSLNNLANIKREQGNIEEAVRLYRKALEVFP 336 (388)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 66777777777777777777777777766543
No 103
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.19 E-value=1.9e-10 Score=101.82 Aligned_cols=136 Identities=12% Similarity=0.148 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHH--------cCCHHHHHHHHHHHHHHHHh
Q 020735 170 NAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLR--------NQDLEKAFTEFKAALELAQN 241 (322)
Q Consensus 170 ~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~--------~g~~~~Al~~~~kAl~l~~~ 241 (322)
....+.+.++..|++++...|.. + ....+++.+|.+++. .|++++|+..|+++++..|.
T Consensus 63 ~~~~~~~~A~~~~~~~l~~~p~~-----------~--~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~ 129 (261)
T 3qky_A 63 YQNKEYLLAASEYERFIQIYQID-----------P--RVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPN 129 (261)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTC-----------T--THHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTT
T ss_pred HHhCcHHHHHHHHHHHHHHCCCC-----------c--hhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcC
Confidence 33447788999999999987751 1 145688999999999 99999999999999998886
Q ss_pred CCChHHH-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHc--------
Q 020735 242 VKDPIEE-----------KKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTEL-------- 302 (322)
Q Consensus 242 ~~d~~~~-----------~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~-------- 302 (322)
....... ...++++|.+|...|++++|+..|+++++..+ +.+....+++.+|.+|..+
T Consensus 130 ~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p---~~~~~~~a~~~l~~~~~~~g~~~~~~~ 206 (261)
T 3qky_A 130 HELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYP---DTPWADDALVGAMRAYIAYAEQSVRAR 206 (261)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---TSTTHHHHHHHHHHHHHHHHHTSCGGG
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCC---CCchHHHHHHHHHHHHHHhcccchhhc
Confidence 4332211 11238999999999999999999999998722 2333788999999999987
Q ss_pred --CCHHHHHHHHHHHHHhhhc
Q 020735 303 --GDLERAARFYDKYISRLES 321 (322)
Q Consensus 303 --gd~e~A~~~~~kAl~i~e~ 321 (322)
|++++|+.+|+++++..++
T Consensus 207 ~~~~~~~A~~~~~~~~~~~p~ 227 (261)
T 3qky_A 207 QPERYRRAVELYERLLQIFPD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT
T ss_pred ccchHHHHHHHHHHHHHHCCC
Confidence 9999999999999987654
No 104
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.19 E-value=1.6e-10 Score=95.00 Aligned_cols=138 Identities=12% Similarity=0.074 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCC--CCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 020735 157 GELQRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSR--IPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKA 234 (322)
Q Consensus 157 ~e~~~l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~--~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~k 234 (322)
.....+.+.+.......+.+.++..|.+++...+.... .................++++|.+|...|++++|+..+++
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 34456677777777777899999999999988432000 0000000000223567889999999999999999999999
Q ss_pred HHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHH-HHHHHHHHHHHHcCCHH
Q 020735 235 ALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGST-EAYGAIADCYTELGDLE 306 (322)
Q Consensus 235 Al~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a-~a~~~Lg~~y~~~gd~e 306 (322)
++++.|. ...+++.+|.+|..+|++++|+.+|++++++ .|... .+...++.+....++++
T Consensus 89 al~~~p~------~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l------~p~~~~~~~~~l~~~~~~~~~~~ 149 (162)
T 3rkv_A 89 VLKREET------NEKALFRRAKARIAAWKLDEAEEDLKLLLRN------HPAAASVVAREMKIVTERRAEKK 149 (162)
T ss_dssp HHHHSTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CGGGHHHHHHHHHHHHHHHHHHT
T ss_pred HHhcCCc------chHHHHHHHHHHHHHhcHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999888 7889999999999999999999999999999 77666 66777887777665544
No 105
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.19 E-value=3.7e-10 Score=102.48 Aligned_cols=132 Identities=20% Similarity=0.159 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Q 020735 162 VNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQN 241 (322)
Q Consensus 162 l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~ 241 (322)
+...+.......+.+.++..|++++...|. ...+++.+|.++...|++++|+..+++++++.+.
T Consensus 6 ~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~----------------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~ 69 (359)
T 3ieg_A 6 HLELGKKLLAAGQLADALSQFHAAVDGDPD----------------NYIAYYRRATVFLAMGKSKAALPDLTKVIALKMD 69 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCcc----------------cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 334444455555788899999999988776 4668899999999999999999999999999877
Q ss_pred CCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCc---hHHHHHHHH------------HHHHHHcCCHH
Q 020735 242 VKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYS---GSTEAYGAI------------ADCYTELGDLE 306 (322)
Q Consensus 242 ~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~---~~a~a~~~L------------g~~y~~~gd~e 306 (322)
...++..+|.++...|++++|+..|++++++ .+ ....++..+ |.++...|+++
T Consensus 70 ------~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~ 137 (359)
T 3ieg_A 70 ------FTAARLQRGHLLLKQGKLDEAEDDFKKVLKS------NPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYT 137 (359)
T ss_dssp ------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred ------cchHHHHHHHHHHHcCChHHHHHHHHHHHhc------CCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHH
Confidence 6688999999999999999999999999988 66 667777666 79999999999
Q ss_pred HHHHHHHHHHHhhhc
Q 020735 307 RAARFYDKYISRLES 321 (322)
Q Consensus 307 ~A~~~~~kAl~i~e~ 321 (322)
+|++.++++++..+.
T Consensus 138 ~A~~~~~~~~~~~~~ 152 (359)
T 3ieg_A 138 AAITFLDKILEVCVW 152 (359)
T ss_dssp HHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999999987553
No 106
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.18 E-value=3.8e-10 Score=108.99 Aligned_cols=101 Identities=10% Similarity=0.054 Sum_probs=92.6
Q ss_pred HHcCCHHHHHHHHHHHHHHHHhC--CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc--CCCchHHHHHHHH
Q 020735 220 LRNQDLEKAFTEFKAALELAQNV--KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISERE--GEYSGSTEAYGAI 295 (322)
Q Consensus 220 ~~~g~~~~Al~~~~kAl~l~~~~--~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~--~d~~~~a~a~~~L 295 (322)
...|+|++|+..+++++++..+. .+....+.++.+||.+|..+|+|++|+.++++++++.++. .++|..+..+++|
T Consensus 309 ~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nL 388 (433)
T 3qww_A 309 KHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKL 388 (433)
T ss_dssp TTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHH
T ss_pred hhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 34689999999999999998874 4567788999999999999999999999999999999985 5688899999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 296 ADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 296 g~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
|.+|..+|++++|..+|++|+++.+
T Consensus 389 a~~~~~qg~~~eA~~~~~~Al~i~~ 413 (433)
T 3qww_A 389 GRLYMGLENKAAGEKALKKAIAIME 413 (433)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999875
No 107
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.18 E-value=1.7e-10 Score=107.61 Aligned_cols=120 Identities=22% Similarity=0.237 Sum_probs=88.7
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 253 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~ 253 (322)
+.+.++..|++++...|. ....+..+|.++...|++++|+..|+++++..|. ...++.
T Consensus 116 ~~~~A~~~~~~al~~~p~----------------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~ 173 (388)
T 1w3b_A 116 DMEGAVQAYVSALQYNPD----------------LYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN------FAVAWS 173 (388)
T ss_dssp CSSHHHHHHHHHHHHCTT----------------CTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTT------CHHHHH
T ss_pred CHHHHHHHHHHHHHhCCC----------------cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC------CHHHHH
Confidence 345555555555555444 3445667778888888888888888888777666 567778
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 254 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 254 ~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
++|.++...|++++|+.+|++++++ .|....++.++|.++...|++++|+..|++++++.++
T Consensus 174 ~l~~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 235 (388)
T 1w3b_A 174 NLGCVFNAQGEIWLAIHHFEKAVTL------DPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPN 235 (388)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhc------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC
Confidence 8888888888888888888888877 6667778888888888888888888888888776543
No 108
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.17 E-value=1.5e-10 Score=104.15 Aligned_cols=126 Identities=10% Similarity=0.130 Sum_probs=107.9
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 253 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~ 253 (322)
+.+.++..+++++...+. ....+..+|.++...|++++|+..++++++..+. ...++.
T Consensus 187 ~~~~A~~~~~~~~~~~~~----------------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~ 244 (327)
T 3cv0_A 187 NYDSAAANLRRAVELRPD----------------DAQLWNKLGATLANGNRPQEALDAYNRALDINPG------YVRVMY 244 (327)
T ss_dssp CHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHH
T ss_pred cHHHHHHHHHHHHHhCCC----------------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC------CHHHHH
Confidence 668888888888887765 4567889999999999999999999999998876 677899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCch------HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 254 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSG------STEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 254 ~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~------~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
++|.++...|++++|+.++++++++.+...+... ...++..+|.++..+|++++|...++++++.+++
T Consensus 245 ~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~~~ 318 (327)
T 3cv0_A 245 NMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVELTYAQNVEPFAK 318 (327)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHHHHTTCCSHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcch
Confidence 9999999999999999999999998443222111 7889999999999999999999999999887754
No 109
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.17 E-value=1.6e-09 Score=86.20 Aligned_cols=101 Identities=12% Similarity=0.139 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Q 020735 162 VNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQN 241 (322)
Q Consensus 162 l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~ 241 (322)
..+.+.......+.+.+++.|++++...|. .+.++.++|.+|..+|++++|+..+++++++.+.
T Consensus 11 ~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~----------------~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~ 74 (127)
T 4gcn_A 11 EKDLGNAAYKQKDFEKAHVHYDKAIELDPS----------------NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRE 74 (127)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC----------------CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcc
Confidence 344556666677899999999999999887 5778999999999999999999999999999987
Q ss_pred CC-ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 020735 242 VK-DPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQI 278 (322)
Q Consensus 242 ~~-d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l 278 (322)
.. +....+.++.++|.++..+|++++|+++|+++++.
T Consensus 75 ~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 75 TRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSE 112 (127)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 64 44557789999999999999999999999999987
No 110
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.17 E-value=1.1e-10 Score=107.26 Aligned_cols=127 Identities=20% Similarity=0.246 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHH
Q 020735 173 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAA 252 (322)
Q Consensus 173 l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~ 252 (322)
.+.+.++..|++++...+. ...+++.+|.++...|++++|+..|++++++.+. ...++
T Consensus 231 g~~~~A~~~~~~al~~~~~----------------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~------~~~~~ 288 (368)
T 1fch_A 231 GEYDKAVDCFTAALSVRPN----------------DYLLWNKLGATLANGNQSEEAVAAYRRALELQPG------YIRSR 288 (368)
T ss_dssp TCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHH
T ss_pred CCHHHHHHHHHHHHHhCcC----------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------cHHHH
Confidence 3678888889998887765 4568889999999999999999999999999876 67889
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCC-----chHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 253 RGLGASLQRQGKYREAIKYHSMVLQISEREGEY-----SGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 253 ~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~-----~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
+++|.++...|++++|+.+|++++++.+...+. +....++..+|.+|..+|++++|...++++++.+++
T Consensus 289 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~~~ 362 (368)
T 1fch_A 289 YNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAYGAADARDLSTLLT 362 (368)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGGHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHhHHHhHHHHHHHHHH
Confidence 999999999999999999999999996654221 223789999999999999999999999999987754
No 111
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.17 E-value=5.5e-10 Score=109.66 Aligned_cols=107 Identities=18% Similarity=0.137 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCch
Q 020735 209 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIE-EKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 287 (322)
Q Consensus 209 a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~-~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~ 287 (322)
...+..+|.+|...|++++|++.|++++++.++.+.... ...++..+|.++...|++++|++.|++++++ .|.
T Consensus 475 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~------~p~ 548 (597)
T 2xpi_A 475 PLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLL------STN 548 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------SSC
T ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh------CCC
Confidence 456778889999999999999999999988776543333 3678889999999999999999999998888 666
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 288 STEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 288 ~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
.+.++..+|.+|...|++++|.++|++++++.++
T Consensus 549 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~ 582 (597)
T 2xpi_A 549 DANVHTAIALVYLHKKIPGLAITHLHESLAISPN 582 (597)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Confidence 7788999999999999999999999999887654
No 112
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.17 E-value=2e-10 Score=97.66 Aligned_cols=147 Identities=15% Similarity=0.159 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 020735 157 GELQRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAAL 236 (322)
Q Consensus 157 ~e~~~l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl 236 (322)
.....+...........+.+.++..|++++...+....................++.++|.+|...|++++|+.++++++
T Consensus 36 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al 115 (198)
T 2fbn_A 36 QSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVL 115 (198)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 34445556566666666889999999999987765110000000000011124678899999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHH-HHHHHH
Q 020735 237 ELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAA-RFYDKY 315 (322)
Q Consensus 237 ~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~-~~~~kA 315 (322)
++.+. ...+++++|.++...|++++|+.+|++++++ .|....++..++.++..+++.+++. ..|.+.
T Consensus 116 ~~~p~------~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 183 (198)
T 2fbn_A 116 KIDKN------NVKALYKLGVANMYFGFLEEAKENLYKAASL------NPNNLDIRNSYELCVNKLKEARKKDKLTFGGM 183 (198)
T ss_dssp HHSTT------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------STTCHHHHHHHHHHHHHHHHHHC---------
T ss_pred HhCcc------cHHHHHHHHHHHHHcccHHHHHHHHHHHHHH------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99887 7889999999999999999999999999999 7778899999999999999998887 444443
No 113
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.16 E-value=4.7e-11 Score=116.21 Aligned_cols=120 Identities=14% Similarity=0.161 Sum_probs=109.5
Q ss_pred HHHH-HHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHH
Q 020735 172 ALRR-QAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKK 250 (322)
Q Consensus 172 ~l~~-e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~ 250 (322)
..+. +.++..|++++...+. ...+++.+|.+|...|++++|+.+|++++++.+. ..
T Consensus 115 ~g~~~~~A~~~~~~al~~~p~----------------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-------~~ 171 (474)
T 4abn_A 115 TPDYSPEAEVLLSKAVKLEPE----------------LVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-------KV 171 (474)
T ss_dssp SSSCCHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-------HH
T ss_pred ccccHHHHHHHHHHHHhhCCC----------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-------HH
Confidence 3377 8899999999998877 5678999999999999999999999999998654 37
Q ss_pred HHHHHHHHHHHc---------CCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHc--------CCHHHHHHHHH
Q 020735 251 AARGLGASLQRQ---------GKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTEL--------GDLERAARFYD 313 (322)
Q Consensus 251 a~~~LG~~~~~~---------gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~--------gd~e~A~~~~~ 313 (322)
++.++|.++... |++++|+++|++++++ .|..+.+++++|.+|..+ |++++|+.+|+
T Consensus 172 ~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~ 245 (474)
T 4abn_A 172 SLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM------DVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYA 245 (474)
T ss_dssp HHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHH
Confidence 899999999999 9999999999999999 788889999999999999 99999999999
Q ss_pred HHHHhhh
Q 020735 314 KYISRLE 320 (322)
Q Consensus 314 kAl~i~e 320 (322)
+++++.+
T Consensus 246 ~al~~~p 252 (474)
T 4abn_A 246 QAEKVDR 252 (474)
T ss_dssp HHHHHCG
T ss_pred HHHHhCC
Confidence 9998765
No 114
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.16 E-value=1.9e-10 Score=101.36 Aligned_cols=128 Identities=17% Similarity=0.086 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHH
Q 020735 172 ALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKA 251 (322)
Q Consensus 172 ~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a 251 (322)
..+.+.++..|++++...+. ...+++.+|...+..+++++|+..|++++++.+. ...+
T Consensus 121 ~~~~~~A~~~~~~al~~~~~----------------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~------~~~~ 178 (272)
T 3u4t_A 121 KGNFPLAIQYMEKQIRPTTT----------------DPKVFYELGQAYYYNKEYVKADSSFVKVLELKPN------IYIG 178 (272)
T ss_dssp TTCHHHHHHHHGGGCCSSCC----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CHHH
T ss_pred ccCHHHHHHHHHHHhhcCCC----------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc------chHH
Confidence 33677788888888877655 4668888995556667999999999999999887 6788
Q ss_pred HHHHHHHHHHcCC---HHHHHHHHHHHHHHHHHcCC--CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 252 ARGLGASLQRQGK---YREAIKYHSMVLQISEREGE--YSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 252 ~~~LG~~~~~~gd---~~eAi~~~~kaL~l~~~~~d--~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
+..+|.++...++ +++|+.+|++++++.+..++ ......++..+|.+|...|++++|.++|++++++.++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~ 253 (272)
T 3u4t_A 179 YLWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRDKVKADAAWKNILALDPT 253 (272)
T ss_dssp HHHHHHHHHHHSTTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCcchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc
Confidence 9999999999999 99999999999999765544 2335678999999999999999999999999998765
No 115
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.15 E-value=2.8e-10 Score=96.89 Aligned_cols=98 Identities=16% Similarity=0.123 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCch
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 287 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~ 287 (322)
.+..++.+|..++..|++++|+..|++++. . ...+++++|.++...|++++|+++|++++++ .+.
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~---~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~~~ 69 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQD---P------HSRICFNIGCMYTILKNMTEAEKAFTRSINR------DKH 69 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSSS---C------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTT
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHcC---C------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------Ccc
Confidence 556788899999999999999999999851 1 3568999999999999999999999999999 777
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 288 STEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 288 ~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
.+.+++++|.+|...|++++|+.+|++++++.+
T Consensus 70 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~ 102 (213)
T 1hh8_A 70 LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLR 102 (213)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTT
T ss_pred chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCC
Confidence 889999999999999999999999999998654
No 116
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.15 E-value=4.7e-10 Score=86.69 Aligned_cols=111 Identities=14% Similarity=0.150 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChH
Q 020735 167 RQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPI 246 (322)
Q Consensus 167 ~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~ 246 (322)
.......+.+.++..|++++...+. ....+..+|.++...|++++|+..++++++..+.
T Consensus 20 ~~~~~~~~~~~A~~~~~~~~~~~~~----------------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~----- 78 (131)
T 2vyi_A 20 NEQMKVENFEAAVHFYGKAIELNPA----------------NAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA----- 78 (131)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-----
T ss_pred HHHHHccCHHHHHHHHHHHHHcCCC----------------CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc-----
Confidence 3334444678888899999987765 4567889999999999999999999999998776
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCH
Q 020735 247 EEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDL 305 (322)
Q Consensus 247 ~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~ 305 (322)
...+++.+|.++...|++++|+.++++++++ .+....++..+|.++..+|++
T Consensus 79 -~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~------~p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 79 -YSKAYGRMGLALSSLNKHVEAVAYYKKALEL------DPDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp -CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------STTCHHHHHHHHHHHHHHTTC
T ss_pred -CHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc------CccchHHHHHHHHHHHHHhcC
Confidence 5778999999999999999999999999999 677778999999999999875
No 117
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.14 E-value=4.3e-10 Score=86.98 Aligned_cols=98 Identities=28% Similarity=0.475 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHH
Q 020735 211 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTE 290 (322)
Q Consensus 211 ~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~ 290 (322)
+++.+|..+...|++++|+..++++++..+. ...++..+|.++...|++++|+.+++++++. .+....
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~------~~~~~~ 70 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELDPR------SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL------DPRSAE 70 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------CTTCHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcCCc------chhHHHHHHHHHHHhcCHHHHHHHHHHHHHH------CCCchH
Confidence 5678899999999999999999999988765 5678899999999999999999999999988 566678
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 291 AYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 291 a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
++..+|.++...|++++|..+++++++..+
T Consensus 71 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~ 100 (136)
T 2fo7_A 71 AWYNLGNAYYKQGDYDEAIEYYQKALELDP 100 (136)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCC
Confidence 899999999999999999999999998654
No 118
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.14 E-value=3.9e-10 Score=87.88 Aligned_cols=109 Identities=13% Similarity=0.161 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHH
Q 020735 168 QINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIE 247 (322)
Q Consensus 168 ~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~ 247 (322)
......+.+.++..|++++...+. ....++.+|.+|...|++++|+.++++++++.+.
T Consensus 25 ~~~~~~~~~~A~~~~~~al~~~~~----------------~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~------ 82 (133)
T 2lni_A 25 ECFQKGDYPQAMKHYTEAIKRNPK----------------DAKLYSNRAACYTKLLEFQLALKDCEECIQLEPT------ 82 (133)
T ss_dssp HHHHTTCSHHHHHHHHHHHTTCTT----------------CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT------
T ss_pred HHHHcCCHHHHHHHHHHHHHcCCC----------------cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC------
Confidence 334444677888899999887765 4668889999999999999999999999998877
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCC
Q 020735 248 EKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGD 304 (322)
Q Consensus 248 ~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd 304 (322)
...+++++|.++...|++++|+.++++++++ .+....++..++.++..+|+
T Consensus 83 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~------~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 83 FIKGYTRKAAALEAMKDYTKAMDVYQKALDL------DSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CGGGTHHHHHHHHHHHHHTC
T ss_pred chHHHHHHHHHHHHHhhHHHHHHHHHHHHHh------CCCchHHHHHHHHHHHHhcC
Confidence 6788999999999999999999999999998 77778899999999988774
No 119
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.14 E-value=1.4e-09 Score=98.70 Aligned_cols=136 Identities=14% Similarity=0.148 Sum_probs=105.9
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 253 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~ 253 (322)
+.+.++..+++++...+...... ..-...........+|..+...|++++|+..++++++..+. +......++.
T Consensus 203 ~~~~A~~~~~~a~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~~~~~ 276 (359)
T 3ieg_A 203 DHELSLSEVRECLKLDQDHKRCF----AHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS--VAEYTVRSKE 276 (359)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHH----HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS--SHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCccchHHH----HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC--chHHHHHHHH
Confidence 66777777888777665400000 00000001223456699999999999999999999998765 4455567788
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 254 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 254 ~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
.+|.++...|++++|+.++++++++ .|..+.+++.+|.+|...|++++|..+|++++++.++
T Consensus 277 ~la~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~ 338 (359)
T 3ieg_A 277 RICHCFSKDEKPVEAIRICSEVLQM------EPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNEN 338 (359)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHh------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999998 7777889999999999999999999999999987654
No 120
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.13 E-value=4.6e-10 Score=97.64 Aligned_cols=140 Identities=15% Similarity=0.072 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC
Q 020735 163 NEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV 242 (322)
Q Consensus 163 ~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~ 242 (322)
.+.........+.+.++..|++++...|.. + ....+++.+|.+|+..|++++|+..|+++++..|+.
T Consensus 8 ~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~-----------~--~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~ 74 (225)
T 2yhc_A 8 YATAQQKLQDGNWRQAITQLEALDNRYPFG-----------P--YSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTH 74 (225)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTS-----------T--THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----------h--HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCC
Confidence 334445555668888999999999877651 0 134578899999999999999999999999988863
Q ss_pred CChHHHHHHHHHHHHHHHH------------------cCCHHHHHHHHHHHHHHHHHcCCCchHH--------------H
Q 020735 243 KDPIEEKKAARGLGASLQR------------------QGKYREAIKYHSMVLQISEREGEYSGST--------------E 290 (322)
Q Consensus 243 ~d~~~~~~a~~~LG~~~~~------------------~gd~~eAi~~~~kaL~l~~~~~d~~~~a--------------~ 290 (322)
.. ...+++.+|.++.. .|++++|+..|+++++..+. .+... .
T Consensus 75 ~~---~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~---~~~a~~a~~~l~~~~~~~~~ 148 (225)
T 2yhc_A 75 PN---IDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPN---SQYTTDATKRLVFLKDRLAK 148 (225)
T ss_dssp TT---HHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTT---CTTHHHHHHHHHHHHHHHHH
T ss_pred Cc---HHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcC---ChhHHHHHHHHHHHHHHHHH
Confidence 22 34578888988876 57999999999999887332 22111 2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 291 AYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 291 a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
....+|.+|...|++++|+..|+++++..++
T Consensus 149 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~ 179 (225)
T 2yhc_A 149 YEYSVAEYYTERGAWVAVVNRVEGMLRDYPD 179 (225)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHHCcC
Confidence 2367899999999999999999999987653
No 121
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.11 E-value=4.3e-10 Score=109.06 Aligned_cols=144 Identities=16% Similarity=0.133 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 020735 159 LQRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALEL 238 (322)
Q Consensus 159 ~~~l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l 238 (322)
...+.+.........+.+.|+..|++++...+....... +.........+.+++++|.+|..+|+|++|+.+|++++++
T Consensus 268 a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~-~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 346 (457)
T 1kt0_A 268 AAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSE-KESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGL 346 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCH-HHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCh-HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 335556566666667889999999999998876110000 0000011223678899999999999999999999999999
Q ss_pred HHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHH-HHHH
Q 020735 239 AQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARF-YDKY 315 (322)
Q Consensus 239 ~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~-~~kA 315 (322)
.+. ...+++++|.+|..+|+|++|+.+|++++++ .|....++.+++.++..++++++|... |++.
T Consensus 347 ~p~------~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l------~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~ 412 (457)
T 1kt0_A 347 DSA------NEKGLYRRGEAQLLMNEFESAKGDFEKVLEV------NPQNKAARLQISMCQKKAKEHNERDRRIYANM 412 (457)
T ss_dssp STT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT------C----CHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCc------cHHHHHHHHHHHHHccCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988 7889999999999999999999999999999 788889999999999999999988753 4433
No 122
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.11 E-value=1e-10 Score=118.94 Aligned_cols=119 Identities=17% Similarity=0.137 Sum_probs=107.1
Q ss_pred HHHHHHHHHHhHh--------hhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCh
Q 020735 174 RRQAKIESYAPSL--------SYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDP 245 (322)
Q Consensus 174 ~~e~al~~y~~al--------~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~ 245 (322)
+.+++++.+++++ ...+. ...+++.+|.+|...|++++|+..|++++++.+.
T Consensus 406 ~~~~A~~~~~~al~~~~~~~~~~~p~----------------~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~---- 465 (681)
T 2pzi_A 406 QPVQTLDSLRAARHGALDADGVDFSE----------------SVELPLMEVRALLDLGDVAKATRKLDDLAERVGW---- 465 (681)
T ss_dssp CHHHHHHHHHHHHTC-------CCTT----------------CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCC----
T ss_pred CHHHHHHHHHHhhhhccccccccccc----------------chhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcc----
Confidence 6678888888888 33333 4557889999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 246 IEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 246 ~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
...+++++|.++...|++++|++.|++++++ +|..+.+++++|.+|..+|++++ +++|++++++.++
T Consensus 466 --~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l------~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~ 532 (681)
T 2pzi_A 466 --RWRLVWYRAVAELLTGDYDSATKHFTEVLDT------FPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDG 532 (681)
T ss_dssp --CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------STTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTT
T ss_pred --hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCc
Confidence 7889999999999999999999999999999 88888999999999999999999 9999999987653
No 123
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.11 E-value=1.9e-09 Score=101.70 Aligned_cols=142 Identities=11% Similarity=0.053 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHH
Q 020735 169 INAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEE 248 (322)
Q Consensus 169 ~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~ 248 (322)
.....+.+.+++.+.+++...+. .+...........+|.++...|++++|+.++++++...+..++....
T Consensus 65 y~~~~~~~~a~~~~~~~~~~~~~----------~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 134 (434)
T 4b4t_Q 65 YVTMGAKDKLREFIPHSTEYMMQ----------FAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLK 134 (434)
T ss_dssp HHHHTCHHHHHHHHHHTHHHHHT----------SCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSH
T ss_pred HHHCCCHHHHHHHHHHHHHHHHH----------ccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHH
Confidence 33444778888888888887765 33333345567778999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 249 KKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 249 ~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
..++.+||.+|...|+|++|+.++++++......++.+..+.++.++|.+|..+|++++|..+|++++.+..
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 135 HSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999998754
No 124
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.10 E-value=2.1e-09 Score=89.60 Aligned_cols=115 Identities=14% Similarity=0.087 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020735 158 ELQRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALE 237 (322)
Q Consensus 158 e~~~l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~ 237 (322)
+...+.+.+.......++++++..|++++.+.|.-.. . + ........+.++.++|.++..+|+|++|+..|.++++
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~--~-~-a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~ 85 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPP--E-E-AFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALH 85 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCT--T-S-CCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcc--h-h-hhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4446667777777778999999999999999886111 0 0 1122223566999999999999999999999999999
Q ss_pred H-------HHhCCChHHHHHHH----HHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Q 020735 238 L-------AQNVKDPIEEKKAA----RGLGASLQRQGKYREAIKYHSMVLQISERE 282 (322)
Q Consensus 238 l-------~~~~~d~~~~~~a~----~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~ 282 (322)
+ .|+ ...+| +++|.++..+|++++|+..|++++++.++.
T Consensus 86 l~n~~~e~~pd------~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d 135 (159)
T 2hr2_A 86 YFNRRGELNQD------EGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEER 135 (159)
T ss_dssp HHHHHCCTTST------HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred hhhccccCCCc------hHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 9 776 77888 999999999999999999999999996653
No 125
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.10 E-value=1.5e-09 Score=106.58 Aligned_cols=125 Identities=13% Similarity=0.138 Sum_probs=102.7
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 253 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~ 253 (322)
+.+++++.|++++...+. ....+..+|..|...|++++|++.|++++++.+. ...++.
T Consensus 422 ~~~~A~~~~~~~~~~~~~----------------~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~------~~~~~~ 479 (597)
T 2xpi_A 422 EHDQAISAYTTAARLFQG----------------THLPYLFLGMQHMQLGNILLANEYLQSSYALFQY------DPLLLN 479 (597)
T ss_dssp CHHHHHHHHHHHHHTTTT----------------CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC------CHHHHH
T ss_pred CHHHHHHHHHHHHHhCcc----------------chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------ChHHHH
Confidence 445555566655554433 3456778899999999999999999999988776 567899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 254 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGS-TEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 254 ~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~-a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
.+|.++...|++++|+++|++++++.++.+..+.. ..++..+|.+|...|++++|.++|++++++.+
T Consensus 480 ~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p 547 (597)
T 2xpi_A 480 ELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLST 547 (597)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999998776656653 78999999999999999999999999988754
No 126
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.10 E-value=6.4e-10 Score=106.09 Aligned_cols=114 Identities=15% Similarity=0.018 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCC---hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKD---PIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGE 284 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d---~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d 284 (322)
.+..+..+|.+|..+|++++|+++|++|+++.+.... ......++.++|.+|..+|++++|+.++++++++.+...+
T Consensus 50 ~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~ 129 (472)
T 4g1t_A 50 KATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSS 129 (472)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhccc
Confidence 4557788999999999999999999999999775432 2234567999999999999999999999999999988654
Q ss_pred --CchHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHhhhc
Q 020735 285 --YSGSTEAYGAIADCYTEL--GDLERAARFYDKYISRLES 321 (322)
Q Consensus 285 --~~~~a~a~~~Lg~~y~~~--gd~e~A~~~~~kAl~i~e~ 321 (322)
.+..+.++.++|+++... ++|++|+++|++++++-++
T Consensus 130 ~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~ 170 (472)
T 4g1t_A 130 PYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPK 170 (472)
T ss_dssp SSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTT
T ss_pred ccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCC
Confidence 334677888898887765 4799999999999987654
No 127
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.09 E-value=2.9e-11 Score=92.03 Aligned_cols=101 Identities=10% Similarity=0.133 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCch
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 287 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~ 287 (322)
.+..++.+|.+++..|++++|+..|++++++.+. ...+++++|.++...|++++|++++++++++.+..++...
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 76 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ------NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAI 76 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC------CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHH
Confidence 4567889999999999999999999999999887 6788999999999999999999999999988222111112
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 020735 288 STEAYGAIADCYTELGDLERAARFYDK 314 (322)
Q Consensus 288 ~a~a~~~Lg~~y~~~gd~e~A~~~~~k 314 (322)
...+++.+|.++..+|++++|+..+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 77 RSKLQYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHHHHHHHHhHhhhHhHHHH
Confidence 388999999999999988887766544
No 128
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.09 E-value=6.7e-10 Score=91.43 Aligned_cols=97 Identities=18% Similarity=0.147 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 020735 161 RVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 240 (322)
Q Consensus 161 ~l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~ 240 (322)
.+...........+.+.++..|++++...+. ....++++|.+|...|++++|+..|++++++.+
T Consensus 13 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p 76 (164)
T 3sz7_A 13 KLKSEGNAAMARKEYSKAIDLYTQALSIAPA----------------NPIYLSNRAAAYSASGQHEKAAEDAELATVVDP 76 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc----------------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 3444444555556888999999999998877 567899999999999999999999999999998
Q ss_pred hCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 020735 241 NVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQIS 279 (322)
Q Consensus 241 ~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~ 279 (322)
. ...+++++|.+|..+|++++|+.+|++++++.
T Consensus 77 ~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 77 K------YSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109 (164)
T ss_dssp T------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred C------CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 8 78899999999999999999999999999993
No 129
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.09 E-value=8e-11 Score=98.06 Aligned_cols=89 Identities=18% Similarity=0.252 Sum_probs=81.7
Q ss_pred HcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHHHHHcCCCchHHH
Q 020735 221 RNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKY----------REAIKYHSMVLQISEREGEYSGSTE 290 (322)
Q Consensus 221 ~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~----------~eAi~~~~kaL~l~~~~~d~~~~a~ 290 (322)
+.+.|++|+..+++++++.|. .+.+++++|.++...+++ ++|+..|+++|++ +|....
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~------~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l------dP~~~~ 81 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPL------DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLI------DPKKDE 81 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH------CTTCHH
T ss_pred HHhHHHHHHHHHHHHHHHCCC------CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh------CcCcHH
Confidence 446789999999999999999 899999999999999875 5999999999999 999999
Q ss_pred HHHHHHHHHHHcC-----------CHHHHHHHHHHHHHhhhc
Q 020735 291 AYGAIADCYTELG-----------DLERAARFYDKYISRLES 321 (322)
Q Consensus 291 a~~~Lg~~y~~~g-----------d~e~A~~~~~kAl~i~e~ 321 (322)
+|+++|.+|..+| ++++|+++|++|+++-++
T Consensus 82 A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~ 123 (158)
T 1zu2_A 82 AVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPD 123 (158)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCC
Confidence 9999999999885 899999999999998654
No 130
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.09 E-value=1.6e-10 Score=107.69 Aligned_cols=108 Identities=19% Similarity=0.206 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCC-----------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 020735 207 EELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKD-----------PIEEKKAARGLGASLQRQGKYREAIKYHSMV 275 (322)
Q Consensus 207 ~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d-----------~~~~~~a~~~LG~~~~~~gd~~eAi~~~~ka 275 (322)
..+..+..+|..++..|+|++|+..|++++++.+.... ......+++++|.+|..+|+|++|+.+|+++
T Consensus 177 ~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~a 256 (338)
T 2if4_A 177 GAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIV 256 (338)
T ss_dssp HHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 45667889999999999999999999999998765100 0001138999999999999999999999999
Q ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 276 LQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 276 L~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
+++ ++....+++++|.+|..+|++++|+.+|++++++.+
T Consensus 257 l~~------~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p 295 (338)
T 2if4_A 257 LTE------EEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAP 295 (338)
T ss_dssp HHH------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC---
T ss_pred HHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCC
Confidence 999 788889999999999999999999999999987754
No 131
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.08 E-value=3e-09 Score=100.24 Aligned_cols=155 Identities=11% Similarity=0.047 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccC-CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCC
Q 020735 166 LRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVD-PKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKD 244 (322)
Q Consensus 166 l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~-~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d 244 (322)
.+......+.++|++.|.+++...+............. .......++..+|.+|...|++++|.+++.+++++.+..++
T Consensus 11 a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~ 90 (434)
T 4b4t_Q 11 ARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAK 90 (434)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCH
T ss_pred HHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccc
Confidence 34445555788899999999988776433222211111 12234457888999999999999999999999999999888
Q ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 245 PIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 245 ~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
......+...+|.++...|++++|+.++++++.+.+..++....+.++.++|.+|...|+|++|..++++++....
T Consensus 91 ~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~ 166 (434)
T 4b4t_Q 91 SKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFK 166 (434)
T ss_dssp HHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHH
Confidence 7777788899999999999999999999999999999998888999999999999999999999999999987643
No 132
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.08 E-value=1.3e-09 Score=105.07 Aligned_cols=110 Identities=12% Similarity=0.021 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC--CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc--CCCc
Q 020735 211 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNV--KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISERE--GEYS 286 (322)
Q Consensus 211 ~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~--~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~--~d~~ 286 (322)
........+..+|+|++|+..+++++++..+. .+......++.+||.+|..+|+|++|+.++++++++.++. .++|
T Consensus 289 ~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp 368 (429)
T 3qwp_A 289 ESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHP 368 (429)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCH
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCCh
Confidence 34445566778999999999999999987654 3556788999999999999999999999999999999885 6788
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 287 GSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 287 ~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
..+..+++||.+|..+|++++|..+|++|+++.+
T Consensus 369 ~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~ 402 (429)
T 3qwp_A 369 VRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMR 402 (429)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999875
No 133
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.08 E-value=9e-10 Score=104.06 Aligned_cols=140 Identities=15% Similarity=0.123 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 020735 160 QRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELA 239 (322)
Q Consensus 160 ~~l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~ 239 (322)
..+.+.........+.+.++..|++++...+........+...........+++++|.+|+.+|++++|+.++++++++.
T Consensus 224 ~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 303 (370)
T 1ihg_A 224 EDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEID 303 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhC
Confidence 34555555566666888899999999985433000000000011233467789999999999999999999999999988
Q ss_pred HhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHH
Q 020735 240 QNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARF 311 (322)
Q Consensus 240 ~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~ 311 (322)
+. ...+++++|.+|..+|++++|+++|++++++ .|....++..++.++..+++++++.+.
T Consensus 304 p~------~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l------~P~~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 304 PS------NTKALYRRAQGWQGLKEYDQALADLKKAQEI------APEDKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp TT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ch------hHHHHHHHHHHHHHccCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87 7889999999999999999999999999999 777788999999999999999888654
No 134
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.08 E-value=1.6e-09 Score=89.44 Aligned_cols=97 Identities=11% Similarity=0.044 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 020735 160 QRVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELA 239 (322)
Q Consensus 160 ~~l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~ 239 (322)
..+...........+.+.++..|++++...|. ....++++|.+|...|+|++|+..|++++++.
T Consensus 37 ~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~----------------~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~ 100 (151)
T 3gyz_A 37 DDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY----------------NVDYIMGLAAIYQIKEQFQQAADLYAVAFALG 100 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC----------------CHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC
Confidence 34455555556666889999999999999887 67789999999999999999999999999999
Q ss_pred HhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 020735 240 QNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQI 278 (322)
Q Consensus 240 ~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l 278 (322)
|. .+.+++++|.+|..+|++++|+.+|++++++
T Consensus 101 P~------~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 101 KN------DYTPVFHTGQCQLRLKAPLKAKECFELVIQH 133 (151)
T ss_dssp SS------CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CC------CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 98 7889999999999999999999999999999
No 135
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.08 E-value=5.4e-10 Score=101.36 Aligned_cols=135 Identities=14% Similarity=0.089 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Q 020735 162 VNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQN 241 (322)
Q Consensus 162 l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~ 241 (322)
+...........+.+.++..|++++...|. ...+++.+|.++...|++++|+..+++++...+.
T Consensus 120 ~~~~a~~~~~~g~~~~A~~~~~~al~~~P~----------------~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~ 183 (287)
T 3qou_A 120 XAQQAMQLMQESNYTDALPLLXDAWQLSNQ----------------NGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQD 183 (287)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHTTS----------------CHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCS
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhCCc----------------chhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcc
Confidence 334444445555778888999999988877 5567788888888888888887766665432221
Q ss_pred ---------------CCC-------------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchH--HHH
Q 020735 242 ---------------VKD-------------PIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGS--TEA 291 (322)
Q Consensus 242 ---------------~~d-------------~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~--a~a 291 (322)
... .+....+++++|.++...|++++|+..|+++++. +|.. ..+
T Consensus 184 ~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~------~p~~~~~~a 257 (287)
T 3qou_A 184 TRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRX------DLTAADGQT 257 (287)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTGGGGHH
T ss_pred hHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhc------ccccccchH
Confidence 000 0014566777888888888888888888887777 5554 667
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020735 292 YGAIADCYTELGDLERAARFYDKYISR 318 (322)
Q Consensus 292 ~~~Lg~~y~~~gd~e~A~~~~~kAl~i 318 (322)
+.+++.++..+|+.++|...|++++..
T Consensus 258 ~~~l~~~~~~~g~~~~a~~~~r~al~~ 284 (287)
T 3qou_A 258 RXTFQEILAALGTGDALASXYRRQLYA 284 (287)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 778888888888888888888777754
No 136
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.07 E-value=2e-09 Score=101.74 Aligned_cols=136 Identities=14% Similarity=0.146 Sum_probs=104.6
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 253 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~ 253 (322)
+.+.++..|++++...+...... ..-...........+|..+...|++++|+..|++++++.+. +......++.
T Consensus 226 ~~~~A~~~~~~~~~~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~--~~~~~~~~~~ 299 (450)
T 2y4t_A 226 DHELSLSEVRECLKLDQDHKRCF----AHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPS--IAEYTVRSKE 299 (450)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHH----HHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCS--SHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCChHHHH----HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--chHHHHHHHH
Confidence 56777777777776655400000 00000001122345599999999999999999999997665 4444567899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 254 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 254 ~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
.+|.++...|++++|+.++++++++ .|..+.++..+|.+|...|++++|..+|++++++.++
T Consensus 300 ~l~~~~~~~g~~~~A~~~~~~a~~~------~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~ 361 (450)
T 2y4t_A 300 RICHCFSKDEKPVEAIRVCSEVLQM------EPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNEN 361 (450)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSS
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHh------CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc
Confidence 9999999999999999999999998 7777899999999999999999999999999987654
No 137
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.07 E-value=1.1e-09 Score=99.71 Aligned_cols=126 Identities=16% Similarity=0.110 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHH--HHHHHcCCHHHHHHHHHHHHHHHHhCCCh
Q 020735 168 QINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTG--KNFLRNQDLEKAFTEFKAALELAQNVKDP 245 (322)
Q Consensus 168 ~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la--~~y~~~g~~~~Al~~~~kAl~l~~~~~d~ 245 (322)
......+.+.++..+++++...|. .....+..+ ..+...|++++|+..|+++++..|.
T Consensus 139 ~~~~~g~~~~A~~~l~~~~~~~p~----------------~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~---- 198 (291)
T 3mkr_A 139 ILLKLDRLDLARKELKKMQDQDED----------------ATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSP---- 198 (291)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCC----
T ss_pred HHHHCCCHHHHHHHHHHHHhhCcC----------------cHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCC----
Confidence 333344788899999999887755 121222222 2233458999999999999998877
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHhhhc
Q 020735 246 IEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLER-AARFYDKYISRLES 321 (322)
Q Consensus 246 ~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~-A~~~~~kAl~i~e~ 321 (322)
...+++++|.++...|++++|++.|++++++ +|..+.++.++|.++..+|++++ +.+++++++++.++
T Consensus 199 --~~~~~~~la~~~~~~g~~~eA~~~l~~al~~------~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~ 267 (291)
T 3mkr_A 199 --TLLLLNGQAACHMAQGRWEAAEGVLQEALDK------DSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRS 267 (291)
T ss_dssp --CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT
T ss_pred --cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCC
Confidence 7889999999999999999999999999999 88889999999999999999976 56899999987654
No 138
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.07 E-value=1e-09 Score=106.00 Aligned_cols=126 Identities=13% Similarity=0.105 Sum_probs=97.5
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 253 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~ 253 (322)
+.+.++..+++++...+. ....+..+|.++...|++++|+..|++++++.+...+.......++
T Consensus 359 ~~~~A~~~~~~~~~~~~~----------------~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 422 (537)
T 3fp2_A 359 KFTESEAFFNETKLKFPT----------------LPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLI 422 (537)
T ss_dssp CHHHHHHHHHHHHHHCTT----------------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHH
T ss_pred CHHHHHHHHHHHHHhCCC----------------ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHH
Confidence 445555555555555443 3346677888888888888888888888888887665555555567
Q ss_pred HHHHHHHHc----------CCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 254 GLGASLQRQ----------GKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 254 ~LG~~~~~~----------gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
.+|.++... |++++|+.+|++++++ .|....++..+|.+|...|++++|.++|++++++.++
T Consensus 423 ~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 494 (537)
T 3fp2_A 423 GKATILARQSSQDPTQLDEEKFNAAIKLLTKACEL------DPRSEQAKIGLAQLKLQMEKIDEAIELFEDSAILART 494 (537)
T ss_dssp HHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 778888888 8888888888888888 6777789999999999999999999999999987653
No 139
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.06 E-value=2.4e-09 Score=101.11 Aligned_cols=132 Identities=20% Similarity=0.187 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 020735 161 RVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 240 (322)
Q Consensus 161 ~l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~ 240 (322)
.+...+.......+.+.++..|++++...+. ...+++.+|.+|...|++++|+..|++++++.+
T Consensus 28 ~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~----------------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p 91 (450)
T 2y4t_A 28 KHLELGKKLLAAGQLADALSQFHAAVDGDPD----------------NYIAYYRRATVFLAMGKSKAALPDLTKVIQLKM 91 (450)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc----------------cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC
Confidence 3344444455555788899999999987766 467889999999999999999999999999988
Q ss_pred hCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHH---HHH------------HHHHHHHHHcCCH
Q 020735 241 NVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGST---EAY------------GAIADCYTELGDL 305 (322)
Q Consensus 241 ~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a---~a~------------~~Lg~~y~~~gd~ 305 (322)
. ...++..+|.+|...|++++|+.+|++++++ .+... .++ +.+|.++...|++
T Consensus 92 ~------~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~ 159 (450)
T 2y4t_A 92 D------FTAARLQRGHLLLKQGKLDEAEDDFKKVLKS------NPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDY 159 (450)
T ss_dssp T------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred C------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc------CCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 7 6788999999999999999999999999887 55444 444 4457789999999
Q ss_pred HHHHHHHHHHHHhhh
Q 020735 306 ERAARFYDKYISRLE 320 (322)
Q Consensus 306 e~A~~~~~kAl~i~e 320 (322)
++|+.+|++++++.+
T Consensus 160 ~~A~~~~~~~~~~~~ 174 (450)
T 2y4t_A 160 TAAIAFLDKILEVCV 174 (450)
T ss_dssp HHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhCC
Confidence 999999999988654
No 140
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.06 E-value=9e-11 Score=114.58 Aligned_cols=102 Identities=16% Similarity=0.182 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCch
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 287 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~ 287 (322)
.+..+..+|..++..|++++|+++|++++++.+. ...+++++|.+|..+|++++|+++|++++++ ++.
T Consensus 5 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l------~p~ 72 (477)
T 1wao_1 5 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPS------NAIYYGNRSLAYLRTECYGYALGDATRAIEL------DKK 72 (477)
T ss_dssp HHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS------CTT
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh------CCC
Confidence 3445566788899999999999999999999887 6889999999999999999999999999998 777
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 288 STEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 288 ~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
.+.+++++|.+|..+|++++|+++|++++++.++
T Consensus 73 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~ 106 (477)
T 1wao_1 73 YIKGYYRRAASNMALGKFRAALRDYETVVKVKPH 106 (477)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 8889999999999999999999999999987653
No 141
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.06 E-value=1e-09 Score=91.58 Aligned_cols=65 Identities=20% Similarity=0.248 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchH--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020735 248 EKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGS--TEAYGAIADCYTELGDLERAARFYDKYISR 318 (322)
Q Consensus 248 ~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~--a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i 318 (322)
...+++++|.++...|++++|+..|++++++ .|.. ..++.++|.++..+|+.++|...|++++..
T Consensus 107 ~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~------~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~~ 173 (176)
T 2r5s_A 107 NFELACELAVQYNQVGRDEEALELLWNILKV------NLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLYS 173 (176)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT------CTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcccHHHHHHHHHHHHHh------CcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 4567888999999999999999999998877 4433 558888999999999999999999988764
No 142
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.05 E-value=1.6e-09 Score=104.53 Aligned_cols=102 Identities=22% Similarity=0.232 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCch
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 287 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~ 287 (322)
...++..+|.++...|++++|+..|++++++.+. ...++.++|.++...|++++|+.+++++++. .+.
T Consensus 309 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~------~~~ 376 (537)
T 3fp2_A 309 YPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPE------NVYPYIQLACLLYKQGKFTESEAFFNETKLK------FPT 376 (537)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTT
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCC
Confidence 3557888999999999999999999999998877 5678899999999999999999999999988 666
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 288 STEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 288 ~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
...++.++|.+|...|++++|..+|++++++.++
T Consensus 377 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 410 (537)
T 3fp2_A 377 LPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEV 410 (537)
T ss_dssp CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCc
Confidence 7788999999999999999999999999987653
No 143
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.03 E-value=1e-10 Score=114.15 Aligned_cols=113 Identities=19% Similarity=0.223 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHH
Q 020735 173 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAA 252 (322)
Q Consensus 173 l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~ 252 (322)
.+.+++++.|++++...+. ...++.++|.+|..+|++++|+..+++++++.+. ...++
T Consensus 20 g~~~~A~~~~~~Al~~~p~----------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~------~~~~~ 77 (477)
T 1wao_1 20 KDYENAIKFYSQAIELNPS----------------NAIYYGNRSLAYLRTECYGYALGDATRAIELDKK------YIKGY 77 (477)
T ss_dssp TCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT------CHHHH
T ss_pred CCHHHHHHHHHHHHHhCCc----------------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC------CHHHH
Confidence 3677899999999998877 5778999999999999999999999999999887 78899
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH--HHHcCCHHHHHHHHH
Q 020735 253 RGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADC--YTELGDLERAARFYD 313 (322)
Q Consensus 253 ~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~--y~~~gd~e~A~~~~~ 313 (322)
+++|.+|..+|++++|+++|++++++ .|....++.+++.+ +..+|++++|++.++
T Consensus 78 ~~lg~~~~~~g~~~eA~~~~~~al~~------~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 78 YRRAASNMALGKFRAALRDYETVVKV------KPHDKDAKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH------STTCTTHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999999 66666788888888 889999999999998
No 144
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.02 E-value=9.1e-10 Score=105.44 Aligned_cols=107 Identities=15% Similarity=0.157 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH---cCCHHHHHHHHHHHHHHHHHcCCC
Q 020735 209 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQR---QGKYREAIKYHSMVLQISEREGEY 285 (322)
Q Consensus 209 a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~---~gd~~eAi~~~~kaL~l~~~~~d~ 285 (322)
...+..+|.++...|++++|+..+++++++.+...+......++.++|.++.. .|++++|+.++++++++ .
T Consensus 372 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~------~ 445 (514)
T 2gw1_A 372 PEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKL------D 445 (514)
T ss_dssp SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHH------C
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHh------C
Confidence 34678899999999999999999999999998754433334589999999999 99999999999999998 6
Q ss_pred chHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 286 SGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 286 ~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
+....++..+|.+|...|++++|..+|++++++.++
T Consensus 446 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 481 (514)
T 2gw1_A 446 PRSEQAKIGLAQMKLQQEDIDEAITLFEESADLART 481 (514)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS
T ss_pred cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccc
Confidence 777889999999999999999999999999987653
No 145
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.02 E-value=2e-09 Score=78.66 Aligned_cols=84 Identities=26% Similarity=0.428 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCch
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 287 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~ 287 (322)
....++.+|.++...|++++|+.+|++++++.+. ...+++++|.++...|++++|+.++++++++ .|.
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~------~p~ 75 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN------NAEAWYNLGNAYYKQGDYDEAIEYYQKALEL------DPN 75 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTT
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC------CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc------CCC
Confidence 5667889999999999999999999999998876 6778999999999999999999999999998 777
Q ss_pred HHHHHHHHHHHHHHcC
Q 020735 288 STEAYGAIADCYTELG 303 (322)
Q Consensus 288 ~a~a~~~Lg~~y~~~g 303 (322)
...++.++|.++...|
T Consensus 76 ~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 76 NAEAKQNLGNAKQKQG 91 (91)
T ss_dssp CHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhcC
Confidence 7889999999998764
No 146
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.01 E-value=2.4e-10 Score=106.45 Aligned_cols=149 Identities=9% Similarity=0.047 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCc-cccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 020735 161 RVNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPE-DEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELA 239 (322)
Q Consensus 161 ~l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~-~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~ 239 (322)
.+.+.........+.+.++..|++++...+....... .............+++++|.+|...|+|++|+.++++++++.
T Consensus 181 ~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 260 (338)
T 2if4_A 181 RRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEE 260 (338)
T ss_dssp HHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 4444444444445778899999999987765100000 000000000011378899999999999999999999999998
Q ss_pred HhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH-HHHcCCHHHHHHHHHHHHHh
Q 020735 240 QNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADC-YTELGDLERAARFYDKYISR 318 (322)
Q Consensus 240 ~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~-y~~~gd~e~A~~~~~kAl~i 318 (322)
+. ...+++++|.+|..+|++++|+.+|++++++ .|....++.+++.+ ....++.+++...|.+++..
T Consensus 261 p~------~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l------~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~ 328 (338)
T 2if4_A 261 EK------NPKALFRRGKAKAELGQMDSARDDFRKAQKY------APDDKAIRRELRALAEQEKALYQKQKEMYKGIFKG 328 (338)
T ss_dssp TT------CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------------------------------------------
T ss_pred CC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 87 7889999999999999999999999999998 77778889999988 45567788899999999876
Q ss_pred hhc
Q 020735 319 LES 321 (322)
Q Consensus 319 ~e~ 321 (322)
.++
T Consensus 329 ~p~ 331 (338)
T 2if4_A 329 KDE 331 (338)
T ss_dssp ---
T ss_pred CCC
Confidence 653
No 147
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.01 E-value=1.9e-09 Score=86.85 Aligned_cols=96 Identities=9% Similarity=-0.078 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC
Q 020735 163 NEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV 242 (322)
Q Consensus 163 ~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~ 242 (322)
...........+.+.++..|++++...|. ....++.+|.+|...|++++|+..|++++++.|.
T Consensus 22 ~~~a~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~- 84 (142)
T 2xcb_A 22 YALGFNQYQAGKWDDAQKIFQALCMLDHY----------------DARYFLGLGACRQSLGLYEQALQSYSYGALMDIN- 84 (142)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHHhCCc----------------cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC-
Confidence 33344445555788899999999998877 5678899999999999999999999999999988
Q ss_pred CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 020735 243 KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISE 280 (322)
Q Consensus 243 ~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~ 280 (322)
...+++++|.++...|++++|+.+|++++++.+
T Consensus 85 -----~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 117 (142)
T 2xcb_A 85 -----EPRFPFHAAECHLQLGDLDGAESGFYSARALAA 117 (142)
T ss_dssp -----CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred -----CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 778899999999999999999999999999955
No 148
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.99 E-value=8.3e-09 Score=78.83 Aligned_cols=103 Identities=26% Similarity=0.407 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHH
Q 020735 173 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAA 252 (322)
Q Consensus 173 l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~ 252 (322)
.+.+.++..+++++...+. ....+..+|.++...|++++|+..++++++..+. ...++
T Consensus 23 ~~~~~A~~~~~~~~~~~~~----------------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~------~~~~~ 80 (125)
T 1na0_A 23 GDYDEAIEYYQKALELDPN----------------NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN------NAEAW 80 (125)
T ss_dssp TCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHH
T ss_pred CCHHHHHHHHHHHHHHCcC----------------cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc------cHHHH
Confidence 3667788888888877655 3557888999999999999999999999998776 56788
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcC
Q 020735 253 RGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELG 303 (322)
Q Consensus 253 ~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~g 303 (322)
..+|.++...|++++|+.++++++++ .|....++.++|.++...|
T Consensus 81 ~~la~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 81 YNLGNAYYKQGDYDEAIEYYQKALEL------DPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHhcc
Confidence 99999999999999999999999998 7777889999999987654
No 149
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.99 E-value=1.5e-09 Score=83.91 Aligned_cols=82 Identities=12% Similarity=0.145 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHH
Q 020735 227 KAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLE 306 (322)
Q Consensus 227 ~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e 306 (322)
+|+..|+++++..+. ...+++++|.++...|++++|+.+|++++++ .|....+++++|.+|...|+++
T Consensus 3 ~a~~~~~~al~~~p~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~la~~~~~~g~~~ 70 (115)
T 2kat_A 3 AITERLEAMLAQGTD------NMLLRFTLGKTYAEHEQFDAALPHLRAALDF------DPTYSVAWKWLGKTLQGQGDRA 70 (115)
T ss_dssp CHHHHHHHHHTTTCC------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHhCCC------cHHHHHHHHHHHHHccCHHHHHHHHHHHHHH------CCCcHHHHHHHHHHHHHcCCHH
Confidence 466677777776665 5667777788888888888888888887777 6666677777788888888888
Q ss_pred HHHHHHHHHHHhhh
Q 020735 307 RAARFYDKYISRLE 320 (322)
Q Consensus 307 ~A~~~~~kAl~i~e 320 (322)
+|..+|++++++.+
T Consensus 71 ~A~~~~~~al~~~~ 84 (115)
T 2kat_A 71 GARQAWESGLAAAQ 84 (115)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcc
Confidence 88888877776653
No 150
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.99 E-value=1.7e-09 Score=88.41 Aligned_cols=97 Identities=8% Similarity=-0.044 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Q 020735 162 VNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQN 241 (322)
Q Consensus 162 l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~ 241 (322)
+...........+.+.++..|++++...|. ....++.+|.+|...|++++|+..|++++++.|.
T Consensus 24 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~ 87 (148)
T 2vgx_A 24 LYSLAFNQYQSGXYEDAHXVFQALCVLDHY----------------DSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIX 87 (148)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHcCcc----------------cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 334444455556788999999999998877 5678899999999999999999999999999988
Q ss_pred CCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 020735 242 VKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISE 280 (322)
Q Consensus 242 ~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~ 280 (322)
...+++++|.+|...|++++|+.+|++++++.+
T Consensus 88 ------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 120 (148)
T 2vgx_A 88 ------EPRFPFHAAECLLQXGELAEAESGLFLAQELIA 120 (148)
T ss_dssp ------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred ------CchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCc
Confidence 778899999999999999999999999999854
No 151
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.98 E-value=1.1e-08 Score=90.72 Aligned_cols=111 Identities=17% Similarity=0.253 Sum_probs=85.9
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHhCCChHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLR----NQDLEKAFTEFKAALELAQNVKDPIEEK 249 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~----~g~~~~Al~~~~kAl~l~~~~~d~~~~~ 249 (322)
+.+.++..|++++... ...+++.+|.+|.. .+++++|+.+|+++++. . ..
T Consensus 57 ~~~~A~~~~~~a~~~~------------------~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--~------~~ 110 (273)
T 1ouv_A 57 NLKKAASFYAKACDLN------------------YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--K------YA 110 (273)
T ss_dssp CHHHHHHHHHHHHHTT------------------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T------CH
T ss_pred CHHHHHHHHHHHHHCC------------------CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc--C------Cc
Confidence 4456666666665432 34577888888888 88888888888888875 2 46
Q ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Q 020735 250 KAARGLGASLQR----QGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTE----LGDLERAARFYDKYISR 318 (322)
Q Consensus 250 ~a~~~LG~~~~~----~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~----~gd~e~A~~~~~kAl~i 318 (322)
.+++++|.+|.. .+++++|+++|+++++. . ...+++++|.+|.. .+++++|+.+|+++++.
T Consensus 111 ~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~------~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~ 179 (273)
T 1ouv_A 111 EGCASLGGIYHDGKVVTRDFKKAVEYFTKACDL------N--DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL 179 (273)
T ss_dssp HHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT------T--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhc------C--cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 678888888888 88888888888888865 2 35678888888888 88899999988888765
No 152
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.98 E-value=4.5e-09 Score=91.30 Aligned_cols=107 Identities=8% Similarity=-0.052 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchH
Q 020735 209 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGS 288 (322)
Q Consensus 209 a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~ 288 (322)
...++.+|..++..|++++|+..|+++++..|. ......+++++|.+|+..|++++|+..|+++++..+ +.+..
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~---~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P---~~~~~ 77 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPF---GPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNP---THPNI 77 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT---STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---TCTTH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCc---CCCcH
Confidence 446888999999999999999999999997764 222457899999999999999999999999998732 23445
Q ss_pred HHHHHHHHHHHHH------------------cCCHHHHHHHHHHHHHhhhc
Q 020735 289 TEAYGAIADCYTE------------------LGDLERAARFYDKYISRLES 321 (322)
Q Consensus 289 a~a~~~Lg~~y~~------------------~gd~e~A~~~~~kAl~i~e~ 321 (322)
..+++.+|.+|.. .|++++|+..|+++++..++
T Consensus 78 ~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~ 128 (225)
T 2yhc_A 78 DYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPN 128 (225)
T ss_dssp HHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcC
Confidence 6789999999986 67999999999999987654
No 153
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.96 E-value=7.9e-09 Score=78.26 Aligned_cols=108 Identities=12% Similarity=0.143 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCC
Q 020735 164 EQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVK 243 (322)
Q Consensus 164 ~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~ 243 (322)
..........+.+.++..|++++...+. ....+..+|.++...|++++|+..++++++..+.
T Consensus 9 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~----------------~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-- 70 (118)
T 1elw_A 9 EKGNKALSVGNIDDALQCYSEAIKLDPH----------------NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-- 70 (118)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT--
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHHCCC----------------cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc--
Confidence 3333444445778889999999988766 4568889999999999999999999999999876
Q ss_pred ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 020735 244 DPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCY 299 (322)
Q Consensus 244 d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y 299 (322)
...+++++|.++...|++++|++++++++++ .|....++..++.+.
T Consensus 71 ----~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 71 ----WGKGYSRKAAALEFLNRFEEAKRTYEEGLKH------EANNPQLKEGLQNME 116 (118)
T ss_dssp ----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT------CTTCHHHHHHHHHHH
T ss_pred ----cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHc------CCCCHHHHHHHHHhh
Confidence 6788999999999999999999999999988 677777888887765
No 154
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.95 E-value=5.4e-09 Score=82.41 Aligned_cols=114 Identities=17% Similarity=0.156 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCh
Q 020735 166 LRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDP 245 (322)
Q Consensus 166 l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~ 245 (322)
........+.+.++..|++++...+. ....++.+|.++...|++++|+..+++++++.+.
T Consensus 16 g~~~~~~~~~~~A~~~~~~al~~~~~----------------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~---- 75 (137)
T 3q49_B 16 GNRLFVGRKYPEAAACYGRAITRNPL----------------VAVYYTNRALCYLKMQQPEQALADCRRALELDGQ---- 75 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT----
T ss_pred HHHHHHhCcHHHHHHHHHHHHhhCcC----------------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCch----
Confidence 33444455778899999999998876 4668899999999999999999999999999887
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHc
Q 020735 246 IEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTEL 302 (322)
Q Consensus 246 ~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~ 302 (322)
...+++++|.++...|++++|+.+|++++++.+..... ....+...+..+....
T Consensus 76 --~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~-~~~~~~~~l~~~~~~~ 129 (137)
T 3q49_B 76 --SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLN-FGDDIPSALRIAKKKR 129 (137)
T ss_dssp --CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCC-CTTHHHHHHHHHHHHH
T ss_pred --hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHH-HHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999997653211 1334455555555443
No 155
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.95 E-value=1.8e-08 Score=77.74 Aligned_cols=113 Identities=15% Similarity=0.186 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC-CChH
Q 020735 168 QINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV-KDPI 246 (322)
Q Consensus 168 ~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~-~d~~ 246 (322)
......+.+.++..|.+++...+. ....++.+|.+|...|++++|+.++++++++.+.. .+..
T Consensus 13 ~~~~~~~~~~A~~~~~~a~~~~~~----------------~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 76 (131)
T 1elr_A 13 DAYKKKDFDTALKHYDKAKELDPT----------------NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYR 76 (131)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHH
T ss_pred HHHHhcCHHHHHHHHHHHHhcCCc----------------cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHH
Confidence 333444778888999999988765 45678899999999999999999999999999874 3444
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcC
Q 020735 247 EEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELG 303 (322)
Q Consensus 247 ~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~g 303 (322)
....+++++|.++...|++++|+++|++++++ .+. ......++.++...+
T Consensus 77 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~------~~~-~~~~~~l~~~~~~~~ 126 (131)
T 1elr_A 77 QIAKAYARIGNSYFKEEKYKDAIHFYNKSLAE------HRT-PDVLKKCQQAEKILK 126 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CCC-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh------CCC-HHHHHHHHHHHHHHH
Confidence 44889999999999999999999999999988 442 566777777766544
No 156
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.95 E-value=1.8e-08 Score=97.07 Aligned_cols=133 Identities=12% Similarity=0.044 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccC-CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 020735 162 VNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVD-PKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 240 (322)
Q Consensus 162 l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~-~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~ 240 (322)
+.+.+.....+++.+++++.+++++..... ..+ +....+.++.++|.+|..+|+|++|+.++++++++..
T Consensus 290 ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~---------~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~ 360 (429)
T 3qwp_A 290 SLKKIEELKAHWKWEQVLAMCQAIISSNSE---------RLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYR 360 (429)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTCSSC---------CCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHhccC---------cCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHH
Confidence 334444444455667788888888876543 233 3345677899999999999999999999999999988
Q ss_pred hC--CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc--CCCchHHHHHHHHHHHHHHcC
Q 020735 241 NV--KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISERE--GEYSGSTEAYGAIADCYTELG 303 (322)
Q Consensus 241 ~~--~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~--~d~~~~a~a~~~Lg~~y~~~g 303 (322)
.. .+.+..+..+++||.+|..+|+|++|+.+|++|+++.+.. .++|.....+.+|+.+..+++
T Consensus 361 ~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~ 427 (429)
T 3qwp_A 361 IFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANIR 427 (429)
T ss_dssp HHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHh
Confidence 64 5667789999999999999999999999999999999986 567888899999999887653
No 157
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.94 E-value=4.9e-09 Score=99.92 Aligned_cols=138 Identities=10% Similarity=-0.000 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCh--HHH
Q 020735 171 AALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDP--IEE 248 (322)
Q Consensus 171 ~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~--~~~ 248 (322)
..++.++|++.|++++...+.. . ........+.++.++|.+|+.+|++++|+.++++++++.+...+. ...
T Consensus 63 ~~G~~~eAl~~~~kAl~~~~~~-----~--~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~ 135 (472)
T 4g1t_A 63 LKGQNEAALECLRKAEELIQQE-----H--ADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIES 135 (472)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHH-----S--GGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCC
T ss_pred HCCCHHHHHHHHHHHHHHHHhc-----C--ccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhh
Confidence 3347788999999998875430 0 000111245678899999999999999999999999999876543 224
Q ss_pred HHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH---HcCCHHHHHHHHHHHHHhhhc
Q 020735 249 KKAARGLGASLQRQ--GKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYT---ELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 249 ~~a~~~LG~~~~~~--gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~---~~gd~e~A~~~~~kAl~i~e~ 321 (322)
+.++.++|.++... ++|++|+++|++++++ +|..+.++..+|.++. ..+++++|++.|++++++.++
T Consensus 136 ~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~------~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~ 207 (472)
T 4g1t_A 136 PELDCEEGWTRLKCGGNQNERAKVCFEKALEK------KPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPD 207 (472)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH------STTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHHHccccHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCc
Confidence 56777888777664 5799999999999999 7777888888887754 567778999999999887543
No 158
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.94 E-value=1.8e-09 Score=84.06 Aligned_cols=86 Identities=13% Similarity=0.134 Sum_probs=72.8
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 253 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~ 253 (322)
+.+.++..|++++...+ +......+++.+|.+|...|++++|+..|++++++.|. ...+++
T Consensus 5 ~~~~A~~~~~~al~~~~-------------~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~ 65 (117)
T 3k9i_A 5 LEAQAVPYYEKAIASGL-------------QGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN------HQALRV 65 (117)
T ss_dssp --CCCHHHHHHHHSSCC-------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHH
T ss_pred cHHHHHHHHHHHHHcCC-------------CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------chHHHH
Confidence 44567777888877620 01226788999999999999999999999999999888 688999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHH
Q 020735 254 GLGASLQRQGKYREAIKYHSMVLQI 278 (322)
Q Consensus 254 ~LG~~~~~~gd~~eAi~~~~kaL~l 278 (322)
++|.++...|++++|+.+++++++.
T Consensus 66 ~l~~~~~~~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 66 FYAMVLYNLGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 9999999999999999999999988
No 159
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.91 E-value=9.4e-09 Score=98.30 Aligned_cols=101 Identities=18% Similarity=0.214 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCc
Q 020735 207 EELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYS 286 (322)
Q Consensus 207 ~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~ 286 (322)
..+..++.+|..++..|++++|+..|+++++..|+ ..++.++|.++...|++++|+..+++++++ .|
T Consensus 4 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-------~~~~~~la~~~~~~g~~~~A~~~~~~al~~------~p 70 (514)
T 2gw1_A 4 KYALALKDKGNQFFRNKKYDDAIKYYNWALELKED-------PVFYSNLSACYVSVGDLKKVVEMSTKALEL------KP 70 (514)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------CS
T ss_pred hhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc-------HHHHHhHHHHHHHHhhHHHHHHHHHHHhcc------Ch
Confidence 46778999999999999999999999999998752 678999999999999999999999999998 78
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 287 GSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 287 ~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
....+++.+|.+|..+|++++|...|+++++..+
T Consensus 71 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~ 104 (514)
T 2gw1_A 71 DYSKVLLRRASANEGLGKFADAMFDLSVLSLNGD 104 (514)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 8889999999999999999999999999987643
No 160
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.91 E-value=1.3e-08 Score=80.77 Aligned_cols=107 Identities=15% Similarity=0.146 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHH
Q 020735 170 NAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEK 249 (322)
Q Consensus 170 ~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~ 249 (322)
....+.+.++..|++++...+. .......++.+|.+|...|++++|+..+++++++.+. ..
T Consensus 39 ~~~~~~~~A~~~~~~a~~~~~~-------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~------~~ 99 (148)
T 2dba_A 39 FKCGDYGGALAAYTQALGLDAT-------------PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGG------DV 99 (148)
T ss_dssp HTTTCHHHHHHHHHHHHTSCCC-------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC------CH
T ss_pred HHhCCHHHHHHHHHHHHHHccc-------------chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc------CH
Confidence 3344677788889988887654 1123678899999999999999999999999999876 67
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Q 020735 250 KAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTE 301 (322)
Q Consensus 250 ~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~ 301 (322)
.+++++|.++...|++++|+.+|++++++ .+....++..++.+...
T Consensus 100 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~l~~~~~~ 145 (148)
T 2dba_A 100 KALYRRSQALEKLGRLDQAVLDLQRCVSL------EPKNKVFQEALRNISGP 145 (148)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH------CSSCHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHc------CCCcHHHHHHHHHHHhh
Confidence 88999999999999999999999999998 67667777777776543
No 161
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.90 E-value=1.3e-08 Score=92.50 Aligned_cols=102 Identities=15% Similarity=0.092 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHH--HHHHHcCCHHHHHHHHHHHHHHHHHcCCC
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLG--ASLQRQGKYREAIKYHSMVLQISEREGEY 285 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG--~~~~~~gd~~eAi~~~~kaL~l~~~~~d~ 285 (322)
...++..+|.+|...|++++|+..++++++..++ ........+ ..+...|++++|+..|+++++. .
T Consensus 129 ~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~------~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~------~ 196 (291)
T 3mkr_A 129 SLECMAMTVQILLKLDRLDLARKELKKMQDQDED------ATLTQLATAWVSLAAGGEKLQDAYYIFQEMADK------C 196 (291)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH------S
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC------cHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHh------C
Confidence 3457888999999999999999999999998654 221111112 2233458999999999999988 7
Q ss_pred chHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 286 SGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 286 ~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
|..+.+++++|.++..+|++++|...|++++++.++
T Consensus 197 p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~ 232 (291)
T 3mkr_A 197 SPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSG 232 (291)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 777899999999999999999999999999987654
No 162
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.90 E-value=2.2e-08 Score=77.98 Aligned_cols=114 Identities=17% Similarity=0.098 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHH
Q 020735 168 QINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIE 247 (322)
Q Consensus 168 ~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~ 247 (322)
......+.+.++..|++++...|.. .....+++.+|.+++..|++++|+..|+++++..+... .
T Consensus 11 ~~~~~~~~~~A~~~~~~~~~~~p~~-------------~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~---~ 74 (129)
T 2xev_A 11 DALKNGKYDDASQLFLSFLELYPNG-------------VYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHD---K 74 (129)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCSSS-------------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTST---T
T ss_pred HHHHhCCHHHHHHHHHHHHHHCCCC-------------cccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCc---c
Confidence 3344447788888999998877651 01235788999999999999999999999999887621 1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcC
Q 020735 248 EKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELG 303 (322)
Q Consensus 248 ~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~g 303 (322)
...+++++|.++...|++++|+.+|+++++. .|....+......+....+
T Consensus 75 ~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~------~p~~~~~~~a~~~l~~l~~ 124 (129)
T 2xev_A 75 AAGGLLKLGLSQYGEGKNTEAQQTLQQVATQ------YPGSDAARVAQERLQSIRL 124 (129)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------STTSHHHHHHHHHHHHHC-
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH------CCCChHHHHHHHHHHHHHh
Confidence 3778999999999999999999999999988 5554444444444444333
No 163
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.89 E-value=4.6e-09 Score=87.36 Aligned_cols=84 Identities=14% Similarity=0.210 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHHHHhC
Q 020735 173 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDL----------EKAFTEFKAALELAQNV 242 (322)
Q Consensus 173 l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~----------~~Al~~~~kAl~l~~~~ 242 (322)
...++++..+++++...|. .+.++.++|.++...+++ ++|+..|++|+++.|+
T Consensus 16 ~~feeA~~~~~~Ai~l~P~----------------~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~- 78 (158)
T 1zu2_A 16 LLFEQIRQDAENTYKSNPL----------------DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK- 78 (158)
T ss_dssp HHHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-
T ss_pred hHHHHHHHHHHHHHHHCCC----------------CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-
Confidence 3678899999999999988 778899999999988775 5999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHH
Q 020735 243 KDPIEEKKAARGLGASLQRQG-----------KYREAIKYHSMVLQI 278 (322)
Q Consensus 243 ~d~~~~~~a~~~LG~~~~~~g-----------d~~eAi~~~~kaL~l 278 (322)
...+++++|.+|..+| ++++|+.+|++|+++
T Consensus 79 -----~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l 120 (158)
T 1zu2_A 79 -----KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDE 120 (158)
T ss_dssp -----CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----cHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHh
Confidence 8999999999999885 899999999999999
No 164
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.89 E-value=7.9e-09 Score=93.58 Aligned_cols=65 Identities=9% Similarity=-0.027 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHH--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEE--KKAARGLGASLQRQGKYREAIKYHSMVLQI 278 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~--~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l 278 (322)
...+++.+|.++...|++++|+..|+++++..|. . ..++.++|.++...|+.++|+..|++++..
T Consensus 218 ~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~------~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~~ 284 (287)
T 3qou_A 218 DAALATQLALQLHQVGRNEEALELLFGHLRXDLT------AADGQTRXTFQEILAALGTGDALASXYRRQLYA 284 (287)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------GGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccc------cccchHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 5668899999999999999999999999999887 4 778999999999999999999999999865
No 165
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.88 E-value=2.5e-09 Score=96.64 Aligned_cols=98 Identities=20% Similarity=0.248 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC
Q 020735 163 NEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV 242 (322)
Q Consensus 163 ~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~ 242 (322)
...+.......+.+.++..|++++...+. ....++++|.+|...|++++|+..+++++++.+.
T Consensus 8 ~~~g~~~~~~g~~~~A~~~~~~al~~~p~----------------~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~- 70 (281)
T 2c2l_A 8 KEQGNRLFVGRKYPEAAACYGRAITRNPL----------------VAVYYTNRALCYLKMQQPEQALADCRRALELDGQ- 70 (281)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCSC----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCc----------------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-
Confidence 33444455556788999999999998876 5678899999999999999999999999998887
Q ss_pred CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Q 020735 243 KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISERE 282 (322)
Q Consensus 243 ~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~ 282 (322)
...+++++|.+|..+|++++|+.+|++++++.+..
T Consensus 71 -----~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 71 -----SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp -----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred -----CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 78899999999999999999999999999997654
No 166
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.87 E-value=5.4e-09 Score=82.37 Aligned_cols=87 Identities=11% Similarity=-0.010 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHH
Q 020735 170 NAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEK 249 (322)
Q Consensus 170 ~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~ 249 (322)
....+.+.++..|++++...|. ...+++.+|.++...|++++|+..|++++++.|. ..
T Consensus 28 ~~~g~~~~A~~~~~~al~~~P~----------------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~------~~ 85 (121)
T 1hxi_A 28 LKLANLAEAALAFEAVCQKEPE----------------REEAWRSLGLTQAENEKDGLAIIALNHARMLDPK------DI 85 (121)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTT----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CH
T ss_pred HHcCCHHHHHHHHHHHHHHCCC----------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CH
Confidence 3444678899999999998887 6778999999999999999999999999999998 78
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 020735 250 KAARGLGASLQRQGKYREAIKYHSMVLQI 278 (322)
Q Consensus 250 ~a~~~LG~~~~~~gd~~eAi~~~~kaL~l 278 (322)
.+++++|.++...|++++|+..|++++++
T Consensus 86 ~~~~~la~~~~~~g~~~~A~~~~~~al~~ 114 (121)
T 1hxi_A 86 AVHAALAVSHTNEHNANAALASLRAWLLS 114 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 89999999999999999999999999988
No 167
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.86 E-value=2.6e-08 Score=76.72 Aligned_cols=85 Identities=24% Similarity=0.331 Sum_probs=74.7
Q ss_pred HHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHH
Q 020735 178 KIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGA 257 (322)
Q Consensus 178 al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~ 257 (322)
+++.|++++...|. ....++.+|.+|...|++++|+..|++++++.+. ...+++++|.
T Consensus 4 a~~~~~~al~~~p~----------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~~la~ 61 (115)
T 2kat_A 4 ITERLEAMLAQGTD----------------NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPT------YSVAWKWLGK 61 (115)
T ss_dssp HHHHHHHHHTTTCC----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------CHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC----------------cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC------cHHHHHHHHH
Confidence 56677888877766 5668899999999999999999999999999887 6788999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHcCC
Q 020735 258 SLQRQGKYREAIKYHSMVLQISEREGE 284 (322)
Q Consensus 258 ~~~~~gd~~eAi~~~~kaL~l~~~~~d 284 (322)
++...|++++|+.+|++++++.+..++
T Consensus 62 ~~~~~g~~~~A~~~~~~al~~~~~~~~ 88 (115)
T 2kat_A 62 TLQGQGDRAGARQAWESGLAAAQSRGD 88 (115)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCHHHHHHHHHHHHHhcccccc
Confidence 999999999999999999999765443
No 168
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.85 E-value=2.3e-08 Score=86.27 Aligned_cols=98 Identities=12% Similarity=0.042 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHH
Q 020735 210 LSRLKTGKNFLR----NQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQR----QGKYREAIKYHSMVLQISER 281 (322)
Q Consensus 210 ~~~~~la~~y~~----~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~----~gd~~eAi~~~~kaL~l~~~ 281 (322)
.+++++|.+|.. .+++++|+.+|+++.+..+ ....+.++++||.+|.. .+++++|+.+|+++++.
T Consensus 86 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~----~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~--- 158 (212)
T 3rjv_A 86 SGEIVLARVLVNRQAGATDVAHAITLLQDAARDSE----SDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL--- 158 (212)
T ss_dssp HHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTT----SHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT---
T ss_pred HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCC----CcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc---
Confidence 345555666555 5566666666665554322 11245666666666666 55666666666665432
Q ss_pred cCCCchHHHHHHHHHHHHHHc-C-----CHHHHHHHHHHHHHh
Q 020735 282 EGEYSGSTEAYGAIADCYTEL-G-----DLERAARFYDKYISR 318 (322)
Q Consensus 282 ~~d~~~~a~a~~~Lg~~y~~~-g-----d~e~A~~~~~kAl~i 318 (322)
+..+.++++||.+|..- | ++++|..+|+++.+.
T Consensus 159 ----~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~ 197 (212)
T 3rjv_A 159 ----SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLE 197 (212)
T ss_dssp ----SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHH
T ss_pred ----CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHc
Confidence 23445566666666553 2 566666666666543
No 169
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.85 E-value=1.2e-08 Score=77.49 Aligned_cols=67 Identities=12% Similarity=0.143 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 248 EKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 248 ~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
...+++++|.+|...|++++|+.+|++++++ .|..+.+++++|.+|..+|++++|+.+|++++++.+
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~ 72 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVET------DPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAR 72 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhh
Confidence 4567888888888888888888888888888 676777888888888888888888888888887654
No 170
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.85 E-value=2.3e-08 Score=88.56 Aligned_cols=93 Identities=17% Similarity=0.285 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHH
Q 020735 210 LSRLKTGKNFLR----NQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQR----QGKYREAIKYHSMVLQISER 281 (322)
Q Consensus 210 ~~~~~la~~y~~----~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~----~gd~~eAi~~~~kaL~l~~~ 281 (322)
.+++.+|.+|.. .+++++|+.+|+++++.. ...+++++|.+|.. .+++++|+++|+++++.
T Consensus 39 ~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--------~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--- 107 (273)
T 1ouv_A 39 SGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--------YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--- 107 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT---
T ss_pred HHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--------CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc---
Confidence 456667777777 777777777777776641 35567777777777 77777777777777654
Q ss_pred cCCCchHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Q 020735 282 EGEYSGSTEAYGAIADCYTE----LGDLERAARFYDKYISR 318 (322)
Q Consensus 282 ~~d~~~~a~a~~~Lg~~y~~----~gd~e~A~~~~~kAl~i 318 (322)
. .+.+++++|.+|.. .+++++|+++|+++++.
T Consensus 108 ---~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~ 143 (273)
T 1ouv_A 108 ---K--YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDL 143 (273)
T ss_dssp ---T--CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT
T ss_pred ---C--CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhc
Confidence 1 35667777777777 77777777777777654
No 171
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.84 E-value=1.5e-08 Score=84.44 Aligned_cols=104 Identities=13% Similarity=0.090 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH------------
Q 020735 211 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQI------------ 278 (322)
Q Consensus 211 ~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l------------ 278 (322)
..+.+|..+...|++++|+..|+++++..|. ...+++++|.++...|++++|+..++++++.
T Consensus 8 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~------~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~ 81 (176)
T 2r5s_A 8 QLLKQVSELLQQGEHAQALNVIQTLSDELQS------RGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAK 81 (176)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHTSCHHHHT------SHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC------cHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHH
Confidence 4566788888888888888888888888887 7778888888888888888888777665322
Q ss_pred ---HHHcC-------------CCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 279 ---SEREG-------------EYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 279 ---~~~~~-------------d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
..... ..|..+.+++++|.++...|++++|+..|++++++.+
T Consensus 82 ~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p 139 (176)
T 2r5s_A 82 LELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNL 139 (176)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCT
T ss_pred HHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCc
Confidence 11111 1456678999999999999999999999999998754
No 172
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.82 E-value=6.8e-09 Score=77.67 Aligned_cols=88 Identities=19% Similarity=0.272 Sum_probs=74.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHH
Q 020735 213 LKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKK-AARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEA 291 (322)
Q Consensus 213 ~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~-a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a 291 (322)
+..|..+...|++++|+..|+++++..+. ... +++++|.++...|++++|+++|++++++ .|....+
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~------~p~~~~~ 71 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPV------GKDEAYYLMGNAYRKLGDWQKALNNYQSAIEL------NPDSPAL 71 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSS------THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------CTTSTHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCC------cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc------CCCcHHH
Confidence 56899999999999999999999998887 667 9999999999999999999999999999 6665555
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 292 YGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 292 ~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
+.+ +.+.+|..+|++++...+
T Consensus 72 ~~~--------~~~~~a~~~~~~~~~~~p 92 (99)
T 2kc7_A 72 QAR--------KMVMDILNFYNKDMYNQL 92 (99)
T ss_dssp HHH--------HHHHHHHHHHCCTTHHHH
T ss_pred HHH--------HHHHHHHHHHHHHhccCc
Confidence 533 566777777777665543
No 173
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.82 E-value=1e-07 Score=91.91 Aligned_cols=114 Identities=13% Similarity=-0.035 Sum_probs=94.8
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCC-cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC--CChHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDP-KKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV--KDPIEEKK 250 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~-~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~--~d~~~~~~ 250 (322)
++++++..|++++..... ..++ ....+.++.++|.+|..+|+|++|+.++++++++.... .+.+..+.
T Consensus 313 ~~~eA~~~~~~~L~i~~~---------~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~ 383 (433)
T 3qww_A 313 SPSELLEICELSQEKMSS---------VFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVAS 383 (433)
T ss_dssp CHHHHHHHHHHHHHHHTT---------TBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHH
T ss_pred CHHHHHHHHHHHHHHhhC---------ccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHH
Confidence 457788889999887654 2333 34567788999999999999999999999999998874 46778899
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc--CCCchHHHHHHHHH
Q 020735 251 AARGLGASLQRQGKYREAIKYHSMVLQISERE--GEYSGSTEAYGAIA 296 (322)
Q Consensus 251 a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~--~d~~~~a~a~~~Lg 296 (322)
++++||.+|..+|+|++|+.+|++|+++.+.. .++|.......+|.
T Consensus 384 ~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l~ 431 (433)
T 3qww_A 384 MWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEIE 431 (433)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHh
Confidence 99999999999999999999999999999885 45666666666553
No 174
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.80 E-value=5.3e-08 Score=78.58 Aligned_cols=109 Identities=16% Similarity=0.137 Sum_probs=91.8
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 253 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~ 253 (322)
+.+.++..|+++...... . +. +|..|...+..++|+++|+++.+. . .+.+++
T Consensus 10 d~~~A~~~~~~aa~~g~~----------------~--a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g------~~~a~~ 61 (138)
T 1klx_A 10 DLKKAIQYYVKACELNEM----------------F--GC--LSLVSNSQINKQKLFQYLSKACEL--N------SGNGCR 61 (138)
T ss_dssp HHHHHHHHHHHHHHTTCT----------------T--HH--HHHHTCTTSCHHHHHHHHHHHHHT--T------CHHHHH
T ss_pred CHHHHHHHHHHHHcCCCH----------------h--hh--HHHHHHcCCCHHHHHHHHHHHHcC--C------CHHHHH
Confidence 456677778887765422 1 22 899999999999999999999885 2 578899
Q ss_pred HHHHHHHH----cCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHh
Q 020735 254 GLGASLQR----QGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTE----LGDLERAARFYDKYISR 318 (322)
Q Consensus 254 ~LG~~~~~----~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~----~gd~e~A~~~~~kAl~i 318 (322)
+||.+|.. .+|+++|+++|+++.+. +.+.++++||.+|.. .+|+++|.++|++|.+.
T Consensus 62 ~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--------g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 62 FLGDFYENGKYVKKDLRKAAQYYSKACGL--------NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp HHHHHHHHCSSSCCCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCCCccHHHHHHHHHHHHcC--------CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC
Confidence 99999999 89999999999999754 347889999999999 99999999999999875
No 175
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.78 E-value=4.8e-08 Score=74.00 Aligned_cols=71 Identities=17% Similarity=0.295 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGE 284 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d 284 (322)
...+++.+|.+|+..|++++|+.+|++++++.|. ...+++++|.+|...|++++|++.|++++++.+..++
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~------~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~ 76 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPD------YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGT 76 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT------CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCc
Confidence 4567889999999999999999999999999988 6779999999999999999999999999999776554
No 176
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.76 E-value=3.4e-08 Score=89.86 Aligned_cols=96 Identities=16% Similarity=0.101 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHcCCCchHH
Q 020735 211 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQR-QGKYREAIKYHSMVLQISEREGEYSGST 289 (322)
Q Consensus 211 ~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~-~gd~~eAi~~~~kaL~l~~~~~d~~~~a 289 (322)
++..+|..+...|++++|...|+++++..+. ....+...+..... .|++++|+..|+++++. .|..+
T Consensus 136 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~------~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~------~p~~~ 203 (308)
T 2ond_A 136 VYIQYMKFARRAEGIKSGRMIFKKAREDART------RHHVYVTAALMEYYCSKDKSVAFKIFELGLKK------YGDIP 203 (308)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC------CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH------HTTCH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCcH
Confidence 4455555555556666666666666554443 12233333333222 56777777777777666 45556
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020735 290 EAYGAIADCYTELGDLERAARFYDKYISR 318 (322)
Q Consensus 290 ~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i 318 (322)
.++.++|..+...|++++|...|+++++.
T Consensus 204 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 204 EYVLAYIDYLSHLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 77888888888888888888888888874
No 177
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.75 E-value=2.6e-08 Score=90.58 Aligned_cols=114 Identities=11% Similarity=0.067 Sum_probs=62.0
Q ss_pred HHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHH-------HcCCH-------HHHHHHHHHHHH-HHH
Q 020735 176 QAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFL-------RNQDL-------EKAFTEFKAALE-LAQ 240 (322)
Q Consensus 176 e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~-------~~g~~-------~~Al~~~~kAl~-l~~ 240 (322)
+.++..|++++...|. ....++.+|..+. ..|++ ++|...|++|++ +.|
T Consensus 33 ~~a~~~~~~al~~~p~----------------~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p 96 (308)
T 2ond_A 33 KRVMFAYEQCLLVLGH----------------HPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLK 96 (308)
T ss_dssp HHHHHHHHHHHHHHTT----------------CHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHcCC----------------CHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCc
Confidence 3455566666666555 3444455555443 23553 566666666665 444
Q ss_pred hCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHH-HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020735 241 NVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTE-AYGAIADCYTELGDLERAARFYDKYIS 317 (322)
Q Consensus 241 ~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~-a~~~Lg~~y~~~gd~e~A~~~~~kAl~ 317 (322)
. ...++.++|..+...|++++|++.|++++++ .|.... ++.++|.++...|++++|...|+++++
T Consensus 97 ~------~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 162 (308)
T 2ond_A 97 K------NMLLYFAYADYEESRMKYEKVHSIYNRLLAI------EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARE 162 (308)
T ss_dssp T------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS------SSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHT
T ss_pred c------cHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc------cccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 4 4445555666666666666666666666554 333232 555555555555555555555555554
No 178
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.74 E-value=1.2e-07 Score=86.09 Aligned_cols=123 Identities=10% Similarity=-0.005 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHH
Q 020735 173 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAA 252 (322)
Q Consensus 173 l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~ 252 (322)
.+++++.+.|...+...+. .. ..+.+|.+++..+++++|+.+|+++... .+......++
T Consensus 116 g~y~eA~~~l~~~~~~~p~----------------~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~----~d~~~~~~a~ 174 (282)
T 4f3v_A 116 GNYADAMEALEAAPVAGSE----------------HL-VAWMKAVVYGAAERWTDVIDQVKSAGKW----PDKFLAGAAG 174 (282)
T ss_dssp TCHHHHHHHHTSSCCTTCH----------------HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGC----SCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCc----------------hH-HHHHHHHHHHHcCCHHHHHHHHHHhhcc----CCcccHHHHH
Confidence 3556666666555543332 45 8899999999999999999999866442 2344446689
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCch-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 253 RGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG-STEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 253 ~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~-~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
+++|.++..+|++++|+.+|++++.- ...|. ...+.+++|.++..+|+.++|...|+++++..+
T Consensus 175 ~~LG~al~~LG~~~eAl~~l~~a~~g----~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P 239 (282)
T 4f3v_A 175 VAHGVAAANLALFTEAERRLTEANDS----PAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHP 239 (282)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTS----TTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHhcC----CCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 99999999999999999999998732 11144 778999999999999999999999999987643
No 179
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.72 E-value=1.2e-08 Score=84.47 Aligned_cols=91 Identities=18% Similarity=0.241 Sum_probs=78.2
Q ss_pred HHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Q 020735 219 FLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADC 298 (322)
Q Consensus 219 y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~ 298 (322)
+...|++++|+..++++++..+. ...+++.+|.+|...|++++|+.+|++++++ .|..+.++.++|.+
T Consensus 20 ~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~la~~ 87 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRANPQ------NSEQWALLGEYYLWQNDYSNSLLAYRQALQL------RGENAELYAALATV 87 (177)
T ss_dssp CC-----CCCCHHHHHHHHHCCS------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------HCSCHHHHHHHHHH
T ss_pred hhhccCHHHHHHHHHHHHHhCCC------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc------CCCCHHHHHHHHHH
Confidence 45678999999999999998887 6789999999999999999999999999999 66668899999999
Q ss_pred -HHHcCCH--HHHHHHHHHHHHhhhc
Q 020735 299 -YTELGDL--ERAARFYDKYISRLES 321 (322)
Q Consensus 299 -y~~~gd~--e~A~~~~~kAl~i~e~ 321 (322)
|...|++ ++|+.++++++++.++
T Consensus 88 l~~~~~~~~~~~A~~~~~~al~~~p~ 113 (177)
T 2e2e_A 88 LYYQASQHMTAQTRAMIDKALALDSN 113 (177)
T ss_dssp HHHHTTTCCCHHHHHHHHHHHHHCTT
T ss_pred HHHhcCCcchHHHHHHHHHHHHhCCC
Confidence 8899999 9999999999987653
No 180
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.72 E-value=7e-08 Score=70.26 Aligned_cols=68 Identities=28% Similarity=0.479 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 248 EKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 248 ~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
...+++.+|.++...|++++|+.+|++++++ .+....+++++|.+|...|++++|+.+|++++++.++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 75 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN 75 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 5678999999999999999999999999998 6777889999999999999999999999999987653
No 181
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.72 E-value=4.7e-08 Score=73.87 Aligned_cols=68 Identities=21% Similarity=0.315 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 248 EKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 248 ~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
.+.+++++|.++...|++++|+++|++++++ .|..+.+++++|.+|..+|++++|+++|++++++.++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 70 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITA------QPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTST 70 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSS
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC
Confidence 4567899999999999999999999999999 7777899999999999999999999999999987654
No 182
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.71 E-value=7.2e-08 Score=83.17 Aligned_cols=114 Identities=14% Similarity=0.001 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcC----CHHHHHHHHHHHHHHHHhCCChHH
Q 020735 172 ALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQ----DLEKAFTEFKAALELAQNVKDPIE 247 (322)
Q Consensus 172 ~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g----~~~~Al~~~~kAl~l~~~~~d~~~ 247 (322)
..+.+.++..|+++.... ...+++++|.+|.. + ++++|+.+|+++.+ +.
T Consensus 31 ~~~~~~A~~~~~~a~~~g------------------~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g------ 83 (212)
T 3rjv_A 31 SGDYQKAEYWAQKAAAQG------------------DGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AG------ 83 (212)
T ss_dssp HTCHHHHHHHHHHHHHTT------------------CHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TT------
T ss_pred CCCHHHHHHHHHHHHHcC------------------CHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CC------
Confidence 347778888999987642 34588899999998 7 99999999999976 45
Q ss_pred HHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHcCCCc--hHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Q 020735 248 EKKAARGLGASLQR----QGKYREAIKYHSMVLQISEREGEYS--GSTEAYGAIADCYTE----LGDLERAARFYDKYIS 317 (322)
Q Consensus 248 ~~~a~~~LG~~~~~----~gd~~eAi~~~~kaL~l~~~~~d~~--~~a~a~~~Lg~~y~~----~gd~e~A~~~~~kAl~ 317 (322)
.+.++++||.+|.. .+++++|+++|+++++. .+ ..+.++++||.+|.. .+++++|..+|+++++
T Consensus 84 ~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~------~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~ 157 (212)
T 3rjv_A 84 SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARD------SESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSS 157 (212)
T ss_dssp CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSS------TTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHc------CCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 67899999999998 99999999999999999 55 568899999999999 9999999999999998
Q ss_pred h
Q 020735 318 R 318 (322)
Q Consensus 318 i 318 (322)
.
T Consensus 158 ~ 158 (212)
T 3rjv_A 158 L 158 (212)
T ss_dssp T
T ss_pred c
Confidence 6
No 183
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.55 E-value=4.7e-07 Score=90.20 Aligned_cols=118 Identities=9% Similarity=0.006 Sum_probs=108.8
Q ss_pred HHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHhCCC
Q 020735 175 RQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQD----------LEKAFTEFKAALELAQNVKD 244 (322)
Q Consensus 175 ~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~----------~~~Al~~~~kAl~l~~~~~d 244 (322)
.+++++.+.+++...|. ...+++..+.++...++ ++++++.+.++++..++
T Consensus 45 ~eeal~~~~~~l~~nP~----------------~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK--- 105 (567)
T 1dce_A 45 DESVLELTSQILGANPD----------------FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK--- 105 (567)
T ss_dssp SHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT---
T ss_pred CHHHHHHHHHHHHHCch----------------hHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCC---
Confidence 46789999999999988 67789999999999888 99999999999999998
Q ss_pred hHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhhh
Q 020735 245 PIEEKKAARGLGASLQRQG--KYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELG-DLERAARFYDKYISRLE 320 (322)
Q Consensus 245 ~~~~~~a~~~LG~~~~~~g--d~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~g-d~e~A~~~~~kAl~i~e 320 (322)
...+|++.+.++...+ ++++|++++++++++ ++....+|++.+++....| .+++++++++++++...
T Consensus 106 ---~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~------d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p 175 (567)
T 1dce_A 106 ---SYGTWHHRCWLLSRLPEPNWARELELCARFLEA------DERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNF 175 (567)
T ss_dssp ---CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTC
T ss_pred ---CHHHHHHHHHHHHHcccccHHHHHHHHHHHHhh------ccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCC
Confidence 8889999999999999 779999999999999 8888999999999999999 99999999999987654
No 184
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.51 E-value=1.1e-06 Score=67.26 Aligned_cols=83 Identities=16% Similarity=0.125 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCch
Q 020735 209 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKD-PIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG 287 (322)
Q Consensus 209 a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d-~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~ 287 (322)
+..++.+|..++..++|+.|+..|++|++..+.-.. ......++.+||.+++++|++++|+.++++++++ .|.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l------~P~ 78 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL------DPE 78 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTT
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc------CCC
Confidence 446788999999999999999999999998764321 2335678899999999999999999999999999 777
Q ss_pred HHHHHHHHHH
Q 020735 288 STEAYGAIAD 297 (322)
Q Consensus 288 ~a~a~~~Lg~ 297 (322)
...+..+++.
T Consensus 79 ~~~~~~n~~~ 88 (104)
T 2v5f_A 79 HQRANGNLKY 88 (104)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHhhHHH
Confidence 7778888773
No 185
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.50 E-value=8.8e-07 Score=85.62 Aligned_cols=94 Identities=20% Similarity=0.222 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHc
Q 020735 210 LSRLKTGKNFLRNQ---DLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQR----QGKYREAIKYHSMVLQISERE 282 (322)
Q Consensus 210 ~~~~~la~~y~~~g---~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~----~gd~~eAi~~~~kaL~l~~~~ 282 (322)
.+++++|.+|...| ++++|+.+|+++++. . ...++++||.+|.. .+++++|+.+|+++++.
T Consensus 329 ~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~------~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~---- 396 (490)
T 2xm6_A 329 TAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--G------EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ---- 396 (490)
T ss_dssp HHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--T------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----
T ss_pred HHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--C------CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC----
Confidence 35677888888766 788888888888774 2 46788999999998 89999999999998764
Q ss_pred CCCchHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhh
Q 020735 283 GEYSGSTEAYGAIADCYTE----LGDLERAARFYDKYISRL 319 (322)
Q Consensus 283 ~d~~~~a~a~~~Lg~~y~~----~gd~e~A~~~~~kAl~i~ 319 (322)
+.+.++++||.+|.. .+|+++|..+|+++++.-
T Consensus 397 ----~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~ 433 (490)
T 2xm6_A 397 ----GLSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTND 433 (490)
T ss_dssp ----TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 236789999999998 899999999999998765
No 186
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.48 E-value=5.5e-07 Score=66.99 Aligned_cols=64 Identities=23% Similarity=0.264 Sum_probs=58.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 252 ARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTE-AYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 252 ~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~-a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
.+..|..+...|++++|+..|+++++. .|.... +++++|.+|...|++++|+++|++++++.++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 67 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQT------EPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPD 67 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHH------CSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH------CCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 357899999999999999999999998 777788 9999999999999999999999999987654
No 187
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.46 E-value=1.6e-06 Score=66.40 Aligned_cols=73 Identities=12% Similarity=0.111 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC-CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 249 KKAARGLGASLQRQGKYREAIKYHSMVLQISEREGE-YSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 249 ~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d-~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
+.-++.+|..++..++|..|+.+|++|++....... ....+.++.++|.+|..+|++++|+.++++++++.++
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~ 78 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPE 78 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC
Confidence 345789999999999999999999999998764332 2457889999999999999999999999999987654
No 188
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.43 E-value=9.9e-07 Score=87.86 Aligned_cols=121 Identities=8% Similarity=-0.017 Sum_probs=109.4
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHhCCChHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQ--DLEKAFTEFKAALELAQNVKDPIEEKKA 251 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g--~~~~Al~~~~kAl~l~~~~~d~~~~~~a 251 (322)
..+++++.+.+++...|+ ...+++..+.+....+ ++++|++++.+++++.++ ...+
T Consensus 88 ~~~~eL~~~~~~l~~~pK----------------~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~------N~~a 145 (567)
T 1dce_A 88 LVKAELGFLESCLRVNPK----------------SYGTWHHRCWLLSRLPEPNWARELELCARFLEADER------NFHC 145 (567)
T ss_dssp HHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT------CHHH
T ss_pred hHHHHHHHHHHHHHhCCC----------------CHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccc------cccH
Confidence 367788899999998887 6789999999999999 779999999999999998 8899
Q ss_pred HHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHH
Q 020735 252 ARGLGASLQRQG-KYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTEL--------------GDLERAARFYDKYI 316 (322)
Q Consensus 252 ~~~LG~~~~~~g-d~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~--------------gd~e~A~~~~~kAl 316 (322)
|++.+.+....| .+++++++++++|+. ++....+|++.+.++..+ +.+++|++++++|+
T Consensus 146 W~~R~~~l~~l~~~~~~el~~~~~~I~~------~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai 219 (567)
T 1dce_A 146 WDYRRFVAAQAAVAPAEELAFTDSLITR------NFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAF 219 (567)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHTTTTT------TCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHH------CCCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHH
Confidence 999999999999 999999999999988 888899999999999885 66899999999999
Q ss_pred HhhhcC
Q 020735 317 SRLESD 322 (322)
Q Consensus 317 ~i~e~d 322 (322)
.+.++|
T Consensus 220 ~~~P~~ 225 (567)
T 1dce_A 220 FTDPND 225 (567)
T ss_dssp HHCSSC
T ss_pred hhCCCC
Confidence 877653
No 189
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.40 E-value=2.8e-06 Score=82.04 Aligned_cols=91 Identities=15% Similarity=0.220 Sum_probs=52.4
Q ss_pred HHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHHHHHc
Q 020735 211 SRLKTGKNFLR----NQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQR----QGKYREAIKYHSMVLQISERE 282 (322)
Q Consensus 211 ~~~~la~~y~~----~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~----~gd~~eAi~~~~kaL~l~~~~ 282 (322)
+++.+|..|.. .+++++|+.+|+++.+. . ...++++||.+|.. .+++++|+++|+++++.
T Consensus 113 a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~------~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~---- 180 (490)
T 2xm6_A 113 AQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--G------RDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ---- 180 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--C------CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC----
Confidence 44555555555 55666666666655442 1 24455666666665 55666666666665543
Q ss_pred CCCchHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Q 020735 283 GEYSGSTEAYGAIADCYTE----LGDLERAARFYDKYIS 317 (322)
Q Consensus 283 ~d~~~~a~a~~~Lg~~y~~----~gd~e~A~~~~~kAl~ 317 (322)
+.+.++++||.+|.. .+++++|.++|+++++
T Consensus 181 ----~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~ 215 (490)
T 2xm6_A 181 ----GNVWSCNQLGYMYSRGLGVERNDAISAQWYRKSAT 215 (490)
T ss_dssp ----TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence 124566666666666 6666666666666654
No 190
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.38 E-value=3.4e-06 Score=77.60 Aligned_cols=119 Identities=5% Similarity=-0.118 Sum_probs=107.5
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHhCCChHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQ--DLEKAFTEFKAALELAQNVKDPIEEKKA 251 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g--~~~~Al~~~~kAl~l~~~~~d~~~~~~a 251 (322)
..+.++..+.+++...|. ...+++..+.+....+ ++++++.++.+++...|+ ...+
T Consensus 48 ~s~~aL~~t~~~L~~nP~----------------~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk------~y~a 105 (306)
T 3dra_A 48 YSERALHITELGINELAS----------------HYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEK------NYQI 105 (306)
T ss_dssp CSHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTT------CCHH
T ss_pred CCHHHHHHHHHHHHHCcH----------------HHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcc------cHHH
Confidence 346789999999999988 6779999999999999 999999999999999998 7778
Q ss_pred HHHHHHHH----HHc---CCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHhhh
Q 020735 252 ARGLGASL----QRQ---GKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLE--RAARFYDKYISRLE 320 (322)
Q Consensus 252 ~~~LG~~~----~~~---gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e--~A~~~~~kAl~i~e 320 (322)
+++.+.++ ... +++++++++++++++. +|.+..++++.+++....|+++ ++++++++++++-.
T Consensus 106 W~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~------~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~ 177 (306)
T 3dra_A 106 WNYRQLIIGQIMELNNNDFDPYREFDILEAMLSS------DPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDL 177 (306)
T ss_dssp HHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCC
Confidence 88888888 666 8999999999999999 8889999999999999999999 99999999997644
No 191
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.33 E-value=9.4e-07 Score=65.96 Aligned_cols=67 Identities=18% Similarity=0.207 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 249 KKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 249 ~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
..+++.+|.++...|++++|+.+|++++++ .+....++.++|.+|...|++++|+.++++++++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQL------DPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHH------CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHh------CcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 446788999999999999999999999998 6667889999999999999999999999999987543
No 192
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.33 E-value=1.9e-06 Score=84.04 Aligned_cols=115 Identities=14% Similarity=0.131 Sum_probs=66.6
Q ss_pred HHHHHHHhHhh-hcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHH
Q 020735 177 AKIESYAPSLS-YAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGL 255 (322)
Q Consensus 177 ~al~~y~~al~-~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~L 255 (322)
.+...|++++. ..|. ....++.+|..+...|++++|...|++++++.+. + ...++.++
T Consensus 304 ~A~~~~~~Al~~~~p~----------------~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~--~---~~~~~~~~ 362 (530)
T 2ooe_A 304 EAANIYERAISTLLKK----------------NMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDI--D---PTLVYIQY 362 (530)
T ss_dssp HHHHHHHHHTTTTCSS----------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSS--C---HHHHHHHH
T ss_pred HHHHHHHHHHHHhCcc----------------cHHHHHHHHHHHHhcCCHHHHHHHHHHHhCcccc--C---chHHHHHH
Confidence 66777777775 4554 3456666777777777777777777777775443 1 01244445
Q ss_pred HHHHHHcC-----------------------------------CHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Q 020735 256 GASLQRQG-----------------------------------KYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYT 300 (322)
Q Consensus 256 G~~~~~~g-----------------------------------d~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~ 300 (322)
|..+.+.| ++++|...|+++++. .|..+.++..++..+.
T Consensus 363 ~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~------~p~~~~~~~~~~~~~~ 436 (530)
T 2ooe_A 363 MKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKK------YGDIPEYVLAYIDYLS 436 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH------HTTCHHHHHHHHHHHT
T ss_pred HHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHH------CCCCHHHHHHHHHHHH
Confidence 54444444 444555555554444 3333455555555555
Q ss_pred HcCCHHHHHHHHHHHHHh
Q 020735 301 ELGDLERAARFYDKYISR 318 (322)
Q Consensus 301 ~~gd~e~A~~~~~kAl~i 318 (322)
..|++++|...|++++..
T Consensus 437 ~~g~~~~Ar~~~~~al~~ 454 (530)
T 2ooe_A 437 HLNEDNNTRVLFERVLTS 454 (530)
T ss_dssp TTTCHHHHHHHHHHHHHS
T ss_pred hCCCHhhHHHHHHHHHhc
Confidence 556666666666665543
No 193
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.26 E-value=2.7e-06 Score=81.88 Aligned_cols=90 Identities=12% Similarity=0.055 Sum_probs=56.9
Q ss_pred HHHHHHHHH-H--HHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHHHHH
Q 020735 210 LSRLKTGKN-F--LRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQG-----KYREAIKYHSMVLQISER 281 (322)
Q Consensus 210 ~~~~~la~~-y--~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~g-----d~~eAi~~~~kaL~l~~~ 281 (322)
.+++++|.+ | ...+++++|+.+|+++.+. . .+.++++||.+|. .| ++++|+.+|+++.
T Consensus 249 ~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g------~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa----- 314 (452)
T 3e4b_A 249 ASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--D------QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV----- 314 (452)
T ss_dssp HHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--T------CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT-----
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--C------CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh-----
Confidence 345566666 3 3456777777777766642 1 3556677777666 44 7777777777764
Q ss_pred cCCCchHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Q 020735 282 EGEYSGSTEAYGAIADCYTE----LGDLERAARFYDKYIS 317 (322)
Q Consensus 282 ~~d~~~~a~a~~~Lg~~y~~----~gd~e~A~~~~~kAl~ 317 (322)
++.+.++++||.+|.. ..|+++|..+|+++.+
T Consensus 315 ----~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~ 350 (452)
T 3e4b_A 315 ----GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAAR 350 (452)
T ss_dssp ----TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHT
T ss_pred ----CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHh
Confidence 2235667777777765 3377777777777764
No 194
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.23 E-value=3.1e-06 Score=82.57 Aligned_cols=114 Identities=11% Similarity=0.059 Sum_probs=92.2
Q ss_pred HHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHH-------cCCHH-------HHHHHHHHHHH-HHHh
Q 020735 177 AKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLR-------NQDLE-------KAFTEFKAALE-LAQN 241 (322)
Q Consensus 177 ~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~-------~g~~~-------~Al~~~~kAl~-l~~~ 241 (322)
.++..|++++...|. ....++..|..+.. .|+++ +|...|+++++ +.|+
T Consensus 256 ~a~~~y~~al~~~p~----------------~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~ 319 (530)
T 2ooe_A 256 RVMFAYEQCLLVLGH----------------HPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK 319 (530)
T ss_dssp HHHHHHHHHHHHHTT----------------CHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS
T ss_pred HHHHHHHHHHHhCCC----------------CHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc
Confidence 445677788877665 45678888888876 79987 89999999997 6665
Q ss_pred CCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020735 242 VKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGS-TEAYGAIADCYTELGDLERAARFYDKYISR 318 (322)
Q Consensus 242 ~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~-a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i 318 (322)
....+..+|..+...|++++|...|++++++ .+.. ..+|.++|..+...|++++|...|++|++.
T Consensus 320 ------~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~ 385 (530)
T 2ooe_A 320 ------NMLLYFAYADYEESRMKYEKVHSIYNRLLAI------EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARED 385 (530)
T ss_dssp ------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS------SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ------cHHHHHHHHHHHHhcCCHHHHHHHHHHHhCc------cccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 6778999999999999999999999999987 4443 457888888888888888888888888764
No 195
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.18 E-value=2.9e-05 Score=72.12 Aligned_cols=118 Identities=10% Similarity=0.006 Sum_probs=103.3
Q ss_pred HHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHhCCCh
Q 020735 176 QAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQD----------LEKAFTEFKAALELAQNVKDP 245 (322)
Q Consensus 176 e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~----------~~~Al~~~~kAl~l~~~~~d~ 245 (322)
+.++..+.+++...|. ...+++..+.+....+. +++++.++.+++...|+
T Consensus 47 ~eaL~~t~~~L~~nP~----------------~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PK---- 106 (331)
T 3dss_A 47 ESVLELTSQILGANPD----------------FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK---- 106 (331)
T ss_dssp HHHHHHHHHHHTTCTT----------------CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT----
T ss_pred HHHHHHHHHHHHHCch----------------hHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCC----
Confidence 5678888888888877 56678888888776665 68999999999999888
Q ss_pred HHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhhhc
Q 020735 246 IEEKKAARGLGASLQRQG--KYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGD-LERAARFYDKYISRLES 321 (322)
Q Consensus 246 ~~~~~a~~~LG~~~~~~g--d~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd-~e~A~~~~~kAl~i~e~ 321 (322)
...++++.+.++...+ +++++++++.+++++ ++.+..++.+.+++....|. +++++++++++++....
T Consensus 107 --ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~------dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~ 177 (331)
T 3dss_A 107 --SYGTWHHRCWLLSRLPEPNWARELELCARFLEA------DERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFS 177 (331)
T ss_dssp --CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSC
T ss_pred --CHHHHHHHHHHHhccCcccHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCC
Confidence 8889999999999999 499999999999999 88889999999999999999 69999999999986543
No 196
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.17 E-value=2.5e-06 Score=77.45 Aligned_cols=132 Identities=10% Similarity=-0.039 Sum_probs=94.4
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCcc--ccc---cCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPED--EVI---VDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEE 248 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~--~~~---~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~ 248 (322)
+...++..+++.+...+....-... ... .-+-..--...+..|..+...|+|++|.+.|...+...+. .
T Consensus 62 r~~~a~~~~~~~l~l~p~~l~a~~~~~g~y~~~~~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~------~ 135 (282)
T 4f3v_A 62 YSRRNFGQLSGSVQISMSTLNARIAIGGLYGDITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAGSE------H 135 (282)
T ss_dssp HTGGGTTHHHHTTTCCGGGGCCEEECCTTTCCCEEECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCH------H
T ss_pred HHHHHHHHHHHHhcCChhhhhhhhccCCcccccccccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCc------h
Confidence 4556666777777766652111111 000 0000012234556689999999999999999887765444 5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCch-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020735 249 KKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSG-STEAYGAIADCYTELGDLERAARFYDKYIS 317 (322)
Q Consensus 249 ~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~-~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~ 317 (322)
. +.+.+|.++++.++|++|+.+|++++... ++. ...+++++|.++..+|++++|+.+|++++.
T Consensus 136 ~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~-----d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~ 199 (282)
T 4f3v_A 136 L-VAWMKAVVYGAAERWTDVIDQVKSAGKWP-----DKFLAGAAGVAHGVAAANLALFTEAERRLTEAND 199 (282)
T ss_dssp H-HHHHHHHHHHHTTCHHHHHHHHTTGGGCS-----CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred H-HHHHHHHHHHHcCCHHHHHHHHHHhhccC-----CcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 5 88999999999999999999999765441 222 356899999999999999999999999973
No 197
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.16 E-value=4.3e-05 Score=70.89 Aligned_cols=120 Identities=8% Similarity=-0.015 Sum_probs=106.7
Q ss_pred HHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHhCCChHHHHHHH
Q 020735 175 RQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQ--DLEKAFTEFKAALELAQNVKDPIEEKKAA 252 (322)
Q Consensus 175 ~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g--~~~~Al~~~~kAl~l~~~~~d~~~~~~a~ 252 (322)
.+.++..+..++...|. ...++...+.+....+ ++++++.++.+++++.++ ...++
T Consensus 90 l~~EL~~~~~~L~~~PK----------------ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr------Ny~AW 147 (331)
T 3dss_A 90 VKAELGFLESCLRVNPK----------------SYGTWHHRCWLLSRLPEPNWARELELCARFLEADER------NFHCW 147 (331)
T ss_dssp HHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT------CHHHH
T ss_pred HHHHHHHHHHHHHhCCC----------------CHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCC------CHHHH
Confidence 45677778888888877 6778999999999988 499999999999999998 88899
Q ss_pred HHHHHHHHHcCC-HHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHH
Q 020735 253 RGLGASLQRQGK-YREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTEL--------------GDLERAARFYDKYIS 317 (322)
Q Consensus 253 ~~LG~~~~~~gd-~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~--------------gd~e~A~~~~~kAl~ 317 (322)
.+.+.+....|. +++++++++++++. ++.+..++++.+.+.... +.++++++++++++.
T Consensus 148 ~~R~~vl~~l~~~~~eel~~~~~~I~~------~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~ 221 (331)
T 3dss_A 148 DYRRFVAAQAAVAPAEELAFTDSLITR------NFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFF 221 (331)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHH------CSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHH------CCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHH
Confidence 999999999999 69999999999999 888899999999999887 568999999999998
Q ss_pred hhhcC
Q 020735 318 RLESD 322 (322)
Q Consensus 318 i~e~d 322 (322)
+.++|
T Consensus 222 ~~P~d 226 (331)
T 3dss_A 222 TDPND 226 (331)
T ss_dssp HSTTC
T ss_pred hCCCC
Confidence 87654
No 198
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.14 E-value=1.4e-05 Score=73.43 Aligned_cols=120 Identities=7% Similarity=-0.063 Sum_probs=104.0
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHH----HHc---CCHHHHHHHHHHHHHHHHhCCChH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNF----LRN---QDLEKAFTEFKAALELAQNVKDPI 246 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y----~~~---g~~~~Al~~~~kAl~l~~~~~d~~ 246 (322)
..++++..+.+++...|+ ...+++..+.+. ... +++++++.++.++++..++
T Consensus 84 ~~~eeL~~~~~~L~~nPk----------------~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pk----- 142 (306)
T 3dra_A 84 NLYDELDWCEEIALDNEK----------------NYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPK----- 142 (306)
T ss_dssp CHHHHHHHHHHHHHHCTT----------------CCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTT-----
T ss_pred cHHHHHHHHHHHHHHCcc----------------cHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCC-----
Confidence 456677788888888877 455777778877 666 7899999999999999988
Q ss_pred HHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCC------HHHHHHHHHHHHHh
Q 020735 247 EEKKAARGLGASLQRQGKYR--EAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGD------LERAARFYDKYISR 318 (322)
Q Consensus 247 ~~~~a~~~LG~~~~~~gd~~--eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd------~e~A~~~~~kAl~i 318 (322)
...++++.+.+....|+++ +++++++++++. ++.+..++.+.+.+....++ ++++++++++++.+
T Consensus 143 -ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~------d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~ 215 (306)
T 3dra_A 143 -NHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDT------DLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVK 215 (306)
T ss_dssp -CHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHhcccChHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHh
Confidence 8889999999999999998 999999999998 88888999999999999988 99999999999987
Q ss_pred hhc
Q 020735 319 LES 321 (322)
Q Consensus 319 ~e~ 321 (322)
.+.
T Consensus 216 ~p~ 218 (306)
T 3dra_A 216 CPQ 218 (306)
T ss_dssp CSS
T ss_pred CCC
Confidence 654
No 199
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.09 E-value=9.9e-06 Score=75.75 Aligned_cols=119 Identities=9% Similarity=-0.004 Sum_probs=107.1
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHhCCChHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQ-DLEKAFTEFKAALELAQNVKDPIEEKKAA 252 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g-~~~~Al~~~~kAl~l~~~~~d~~~~~~a~ 252 (322)
..+.+++.+.+++...|. ...+++..+.+....+ ++++++.++.+++...++ ...++
T Consensus 69 ~se~AL~lt~~~L~~nP~----------------~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK------ny~aW 126 (349)
T 3q7a_A 69 KSERALELTEIIVRMNPA----------------HYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK------SYQVW 126 (349)
T ss_dssp CSHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC------CHHHH
T ss_pred CCHHHHHHHHHHHHhCch----------------hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC------cHHHH
Confidence 345688899999999988 6778999999999999 599999999999999998 88899
Q ss_pred HHHHHHHHHc-C-CHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHH--------HHHHHHHHHHHhhh
Q 020735 253 RGLGASLQRQ-G-KYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLE--------RAARFYDKYISRLE 320 (322)
Q Consensus 253 ~~LG~~~~~~-g-d~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e--------~A~~~~~kAl~i~e 320 (322)
++.+.++... + ++++++++++++++. ++.+..+++..+++....|.++ ++++++++++++-.
T Consensus 127 ~hR~wlL~~l~~~~~~~EL~~~~k~L~~------dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp 198 (349)
T 3q7a_A 127 HHRLLLLDRISPQDPVSEIEYIHGSLLP------DPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDG 198 (349)
T ss_dssp HHHHHHHHHHCCSCCHHHHHHHHHHTSS------CTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCC
Confidence 9999999988 8 999999999999988 8888999999999999999888 99999999998654
No 200
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.09 E-value=1.2e-05 Score=77.48 Aligned_cols=86 Identities=14% Similarity=0.096 Sum_probs=45.9
Q ss_pred HHHHHHHHHc----CCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHH-H--HHcCCHHHHHHHHHHHHHHHHHcCCC
Q 020735 213 LKTGKNFLRN----QDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGAS-L--QRQGKYREAIKYHSMVLQISEREGEY 285 (322)
Q Consensus 213 ~~la~~y~~~----g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~-~--~~~gd~~eAi~~~~kaL~l~~~~~d~ 285 (322)
+++|.+|... +++++|+.+|+++. +. .+.++++||.+ + ...+++++|+++|+++.+.
T Consensus 217 ~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g------~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~------- 280 (452)
T 3e4b_A 217 DSVARVLGDATLGTPDEKTAQALLEKIA---PG------YPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA------- 280 (452)
T ss_dssp HHHHHHHTCGGGSSCCHHHHHHHHHHHG---GG------STHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT-------
T ss_pred HHHHHHHhCCCCCCCCHHHHHHHHHHHc---CC------CHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC-------
Confidence 4444444333 34555555555444 32 34555666665 2 3456666666666665532
Q ss_pred chHHHHHHHHHHHHHHcC-----CHHHHHHHHHHHH
Q 020735 286 SGSTEAYGAIADCYTELG-----DLERAARFYDKYI 316 (322)
Q Consensus 286 ~~~a~a~~~Lg~~y~~~g-----d~e~A~~~~~kAl 316 (322)
+.+.++++||.+|. .| |+++|..+|+++.
T Consensus 281 -g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa 314 (452)
T 3e4b_A 281 -DQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV 314 (452)
T ss_dssp -TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT
T ss_pred -CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh
Confidence 23456666666665 44 6666666666654
No 201
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.06 E-value=4.2e-05 Score=71.76 Aligned_cols=124 Identities=12% Similarity=0.011 Sum_probs=88.3
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHc---C-CHHHHHHHHHHHHHHHHhCCChHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRN---Q-DLEKAFTEFKAALELAQNVKDPIEEK 249 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~---g-~~~~Al~~~~kAl~l~~~~~d~~~~~ 249 (322)
....+++.|++++...|. .+.++-.++.+|... + ...........+++...........+
T Consensus 214 ~~~~A~~l~e~Al~lDP~----------------~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a 277 (372)
T 3ly7_A 214 SLNRASELLGEIVQSSPE----------------FTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLS 277 (372)
T ss_dssp HHHHHHHHHHHHHHHCTT----------------CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCH
T ss_pred HHHHHHHHHHHHHHhCCC----------------CHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCH
Confidence 346678889999998887 445555555555421 1 11222233344444333333333367
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 250 KAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 250 ~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
.++..++..+...|++++|+.++++++++ ++. ..+|..+|.++...|++++|++.|++|+.+-+
T Consensus 278 ~~~~alal~~l~~gd~d~A~~~l~rAl~L------n~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P 341 (372)
T 3ly7_A 278 IIYQIKAVSALVKGKTDESYQAINTGIDL------EMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRP 341 (372)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH------CCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhc------CCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC
Confidence 78888888888899999999999999999 444 56788999999999999999999999998754
No 202
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.05 E-value=0.00012 Score=60.68 Aligned_cols=107 Identities=19% Similarity=0.184 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCC---hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKD---PIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGE 284 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d---~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d 284 (322)
..++++.-....+..+.|+.|+.....++.+.....+ ......++..+|.+++..++|..|..+|++||+..+....
T Consensus 19 ~~~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k 98 (167)
T 3ffl_A 19 SHMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSK 98 (167)
T ss_dssp --CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--
T ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhc
Confidence 3445666677888999999999999998888876444 5667888999999999999999999999999988774321
Q ss_pred -------------------CchHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 020735 285 -------------------YSGSTEAYGAIADCYTELGDLERAARFYDK 314 (322)
Q Consensus 285 -------------------~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~k 314 (322)
.+...+..+.++.||.+++++++|+...+.
T Consensus 99 ~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 99 TSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 122447889999999999999999988764
No 203
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.01 E-value=7.1e-05 Score=80.61 Aligned_cols=96 Identities=13% Similarity=0.128 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-------
Q 020735 209 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISER------- 281 (322)
Q Consensus 209 a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~------- 281 (322)
..+++.+|..+...|++++|++.|.++ + ....+..+|.++.+.|+|++|+++|..+++..+.
T Consensus 1105 p~vWsqLAKAql~~G~~kEAIdsYiKA-----d------D~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~L 1173 (1630)
T 1xi4_A 1105 PAVWSQLAKAQLQKGMVKEAIDSYIKA-----D------DPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETEL 1173 (1630)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHhc-----C------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHH
Confidence 457889999999999999999999886 2 5667888999999999999999999887754311
Q ss_pred ---------------cCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 020735 282 ---------------EGEYSGSTEAYGAIADCYTELGDLERAARFYDKYI 316 (322)
Q Consensus 282 ---------------~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl 316 (322)
.-..+. ...+..+|..+...|+|++|..+|+++-
T Consensus 1174 afaYAKl~rleele~fI~~~n-~ad~~~iGd~le~eg~YeeA~~~Y~kA~ 1222 (1630)
T 1xi4_A 1174 IFALAKTNRLAELEEFINGPN-NAHIQQVGDRCYDEKMYDAAKLLYNNVS 1222 (1630)
T ss_pred HHHHHhhcCHHHHHHHHhCCC-HHHHHHHHHHHHhcCCHHHHHHHHHhhh
Confidence 001111 2356679999999999999999998874
No 204
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.00 E-value=3.1e-05 Score=63.63 Aligned_cols=67 Identities=15% Similarity=0.072 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHcCCC-c-hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 248 EKKAARGLGASLQRQG---KYREAIKYHSMVLQISEREGEY-S-GSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 248 ~~~a~~~LG~~~~~~g---d~~eAi~~~~kaL~l~~~~~d~-~-~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
...+.+++|+++.+.+ +.++++..+++.++. . | ...+++|+||..|..+|+|++|.+++++++++-+
T Consensus 31 ~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~------~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP 102 (152)
T 1pc2_A 31 SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPK------GSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEP 102 (152)
T ss_dssp CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHH------SCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCT
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc------CCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCC
Confidence 4456667777777666 555777777776665 3 3 4566777777777777777777777777776544
No 205
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.98 E-value=2.5e-05 Score=58.68 Aligned_cols=67 Identities=13% Similarity=-0.019 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 248 EKKAARGLGASLQRQGK---YREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 248 ~~~a~~~LG~~~~~~gd---~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
.+..+..+|.+++..++ .++|...+++++++ +|..+.+.+.+|..+...|+|++|+.+|+++++..+
T Consensus 5 ~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~------dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p 74 (93)
T 3bee_A 5 TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQL------EPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSND 74 (93)
T ss_dssp CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Confidence 35677888888876666 79999999999999 999999999999999999999999999999987543
No 206
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=97.88 E-value=3e-05 Score=72.47 Aligned_cols=120 Identities=8% Similarity=-0.056 Sum_probs=106.4
Q ss_pred HHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHHHHhCCChHHHHHHH
Q 020735 175 RQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRN-Q-DLEKAFTEFKAALELAQNVKDPIEEKKAA 252 (322)
Q Consensus 175 ~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~-g-~~~~Al~~~~kAl~l~~~~~d~~~~~~a~ 252 (322)
.+.++..+.+++...|+ ...+++..+.+.... + +++++++++.++++..++ ...++
T Consensus 105 l~eEL~~~~~~L~~nPK----------------ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpk------Ny~AW 162 (349)
T 3q7a_A 105 LEDELRLMNEFAVQNLK----------------SYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPK------NYHTW 162 (349)
T ss_dssp HHHHHHHHHHHHHTTCC----------------CHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTT------CHHHH
T ss_pred HHHHHHHHHHHHHhCCC----------------cHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCC------CHHHH
Confidence 56778888888888877 677889999999887 7 899999999999998887 78889
Q ss_pred HHHHHHHHHcCCHH--------HHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHH
Q 020735 253 RGLGASLQRQGKYR--------EAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGD-------LERAARFYDKYIS 317 (322)
Q Consensus 253 ~~LG~~~~~~gd~~--------eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd-------~e~A~~~~~kAl~ 317 (322)
.+.+.+....+.++ +++++++++++. ++.+..++++.+.+....++ ++++++++++++.
T Consensus 163 ~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~------dp~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~ 236 (349)
T 3q7a_A 163 AYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRV------DGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIH 236 (349)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccchhhHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHH
Confidence 99999999888887 999999999999 88889999999999999997 7999999999998
Q ss_pred hhhcC
Q 020735 318 RLESD 322 (322)
Q Consensus 318 i~e~d 322 (322)
+.++|
T Consensus 237 ~~P~n 241 (349)
T 3q7a_A 237 LIPHN 241 (349)
T ss_dssp HCTTC
T ss_pred hCCCC
Confidence 76643
No 207
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.87 E-value=0.00014 Score=59.75 Aligned_cols=77 Identities=18% Similarity=0.196 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHH-HhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Q 020735 208 ELLSRLKTGKNFLRNQ---DLEKAFTEFKAALELA-QNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREG 283 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g---~~~~Al~~~~kAl~l~-~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~ 283 (322)
...+.++.|.++.+.. +.++++..+++.++.. | ....+++|+||..+++.|+|++|..++++++++
T Consensus 31 ~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p-----~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~i----- 100 (152)
T 1pc2_A 31 SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSK-----EEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT----- 100 (152)
T ss_dssp CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCH-----HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH-----
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCc-----cchHHHHHHHHHHHHHccCHHHHHHHHHHHHhc-----
Confidence 4568888999999988 6679999999998865 3 236789999999999999999999999999999
Q ss_pred CCchHHHHHHHH
Q 020735 284 EYSGSTEAYGAI 295 (322)
Q Consensus 284 d~~~~a~a~~~L 295 (322)
.|.+..+....
T Consensus 101 -eP~n~QA~~Lk 111 (152)
T 1pc2_A 101 -EPQNNQAKELE 111 (152)
T ss_dssp -CTTCHHHHHHH
T ss_pred -CCCCHHHHHHH
Confidence 77655554443
No 208
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.82 E-value=3.1e-05 Score=62.02 Aligned_cols=78 Identities=26% Similarity=0.327 Sum_probs=66.3
Q ss_pred CCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH-
Q 020735 223 QDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTE- 301 (322)
Q Consensus 223 g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~- 301 (322)
+++++|+.+|+++.+.... .+. ||.+|...+.+++|+++|+++.+. +.+.++++||.+|..
T Consensus 9 ~d~~~A~~~~~~aa~~g~~--------~a~--lg~~y~~g~~~~~A~~~~~~Aa~~--------g~~~a~~~Lg~~y~~G 70 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEM--------FGC--LSLVSNSQINKQKLFQYLSKACEL--------NSGNGCRFLGDFYENG 70 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCT--------THH--HHHHTCTTSCHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHcCCCH--------hhh--HHHHHHcCCCHHHHHHHHHHHHcC--------CCHHHHHHHHHHHHcC
Confidence 4789999999999875322 233 999999999999999999999765 346899999999999
Q ss_pred ---cCCHHHHHHHHHHHHHh
Q 020735 302 ---LGDLERAARFYDKYISR 318 (322)
Q Consensus 302 ---~gd~e~A~~~~~kAl~i 318 (322)
.+|+++|.++|+++.+.
T Consensus 71 ~g~~~d~~~A~~~~~~Aa~~ 90 (138)
T 1klx_A 71 KYVKKDLRKAAQYYSKACGL 90 (138)
T ss_dssp SSSCCCHHHHHHHHHHHHHT
T ss_pred CCCCccHHHHHHHHHHHHcC
Confidence 99999999999999864
No 209
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.74 E-value=8e-05 Score=55.88 Aligned_cols=64 Identities=13% Similarity=0.091 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 020735 209 LLSRLKTGKNFLRNQD---LEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQI 278 (322)
Q Consensus 209 a~~~~~la~~y~~~g~---~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l 278 (322)
...+..+|.+++..++ .++|...+++++++.|+ ...++..+|..++..|+|++|+.+|+++++.
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~------~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~ 72 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY------NEAALSLIANDHFISFRFQEAIDTWVLLLDS 72 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 4566778888876666 79999999999999999 8999999999999999999999999999877
No 210
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=97.74 E-value=0.0027 Score=60.11 Aligned_cols=108 Identities=6% Similarity=-0.111 Sum_probs=94.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC-CCchHHH
Q 020735 212 RLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREG-EYSGSTE 290 (322)
Q Consensus 212 ~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~-d~~~~a~ 290 (322)
...+|..|+..|+|.+|...+.+.++-.....|+......+..-..+|...+++.++...+.++........ ++...+.
T Consensus 102 ~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~ 181 (394)
T 3txn_A 102 EARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGA 181 (394)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHH
Confidence 347899999999999999999999999999999999999999999999999999999999999999887763 3334666
Q ss_pred HHHHHHHHHH-HcCCHHHHHHHHHHHHHhh
Q 020735 291 AYGAIADCYT-ELGDLERAARFYDKYISRL 319 (322)
Q Consensus 291 a~~~Lg~~y~-~~gd~e~A~~~~~kAl~i~ 319 (322)
....-|..+. ..++|++|..+|-++.+-+
T Consensus 182 i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f 211 (394)
T 3txn_A 182 LDLQSGILHAADERDFKTAFSYFYEAFEGF 211 (394)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHhccCHHHHHHHHHHHHhcc
Confidence 7777799999 8999999999998887544
No 211
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.66 E-value=0.00099 Score=71.94 Aligned_cols=95 Identities=17% Similarity=0.132 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC-------------CChHH--------HHHHHHHHHHHHHHcCCHHH
Q 020735 209 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV-------------KDPIE--------EKKAARGLGASLQRQGKYRE 267 (322)
Q Consensus 209 a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~-------------~d~~~--------~~~a~~~LG~~~~~~gd~~e 267 (322)
...+...|.++.+.|+|++|+++|..|++..+.. +.... ....+.++|..+...|+|++
T Consensus 1134 ~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~n~ad~~~iGd~le~eg~Yee 1213 (1630)
T 1xi4_A 1134 PSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDA 1213 (1630)
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHH
Confidence 4467779999999999999999998877544221 11111 11246789999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020735 268 AIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYIS 317 (322)
Q Consensus 268 Ai~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~ 317 (322)
|+.+|.++ ..|..+|.+|..+|++++|++.+++|..
T Consensus 1214 A~~~Y~kA--------------~ny~rLA~tLvkLge~q~AIEaarKA~n 1249 (1630)
T 1xi4_A 1214 AKLLYNNV--------------SNFGRLASTLVHLGEYQAAVDGARKANS 1249 (1630)
T ss_pred HHHHHHhh--------------hHHHHHHHHHHHhCCHHHHHHHHHHhCC
Confidence 99999985 3588899999999999999999998854
No 212
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.66 E-value=0.00064 Score=62.38 Aligned_cols=121 Identities=10% Similarity=0.016 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHH
Q 020735 173 LRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAA 252 (322)
Q Consensus 173 l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~ 252 (322)
.+.++++..+.+.+...+. .....+....+.++...|+.+.|.+.+++..+..++ ..+......
T Consensus 114 g~~eeAL~~l~~~i~~~~~--------------~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d--~~~~~d~~l 177 (310)
T 3mv2_B 114 GDLDKSLETCVEGIDNDEA--------------EGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIED--TVSGDNEMI 177 (310)
T ss_dssp TCHHHHHHHHHHHHTSSCS--------------TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCH--HHHHHHHHH
T ss_pred CCHHHHHHHHHHHhccCCC--------------cCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCcc--ccccchHHH
Confidence 3667777777777654431 126678888999999999999999999998776541 001112233
Q ss_pred HHH--HHHHHHcC--CHHHHHHHHHHHHHHHHHcCCCch--HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020735 253 RGL--GASLQRQG--KYREAIKYHSMVLQISEREGEYSG--STEAYGAIADCYTELGDLERAARFYDKYISR 318 (322)
Q Consensus 253 ~~L--G~~~~~~g--d~~eAi~~~~kaL~l~~~~~d~~~--~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i 318 (322)
..| +++....| ++.+|...|++..+. .+. ....+++ ++..+|++++|...+++.++.
T Consensus 178 ~~Laea~v~l~~g~~~~q~A~~~f~El~~~------~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~ 240 (310)
T 3mv2_B 178 LNLAESYIKFATNKETATSNFYYYEELSQT------FPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSD 240 (310)
T ss_dssp HHHHHHHHHHHHTCSTTTHHHHHHHHHHTT------SCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSH
T ss_pred HHHHHHHHHHHhCCccHHHHHHHHHHHHHh------CCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHh
Confidence 444 44466666 999999999996544 443 3444554 899999999999999977655
No 213
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.61 E-value=0.00021 Score=64.81 Aligned_cols=102 Identities=13% Similarity=0.059 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHH---c--C------CHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHc-----CCHHHHHHH
Q 020735 208 ELLSRLKTGKNFLR---N--Q------DLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQ-----GKYREAIKY 271 (322)
Q Consensus 208 ~a~~~~~la~~y~~---~--g------~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~-----gd~~eAi~~ 271 (322)
.+..+++.|.+... . + ...+|...+++++++.|+ .....++..||..|... |+.++|.++
T Consensus 151 dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~----~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ 226 (301)
T 3u64_A 151 DVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPS----YQEGAVWNVLTKFYAAAPESFGGGMEKAHTA 226 (301)
T ss_dssp GHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTT----HHHHHHHHHHHHHHHHSCTTTTCCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCC----cccCHHHHHHHHHHHhCCCccCCCHHHHHHH
Confidence 55666666666533 1 2 256777788888888875 33466899999999995 999999999
Q ss_pred HHHHHHHHHHcCCCchH-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhh
Q 020735 272 HSMVLQISEREGEYSGS-TEAYGAIADCYTE-LGDLERAARFYDKYISRL 319 (322)
Q Consensus 272 ~~kaL~l~~~~~d~~~~-a~a~~~Lg~~y~~-~gd~e~A~~~~~kAl~i~ 319 (322)
|++++++ .|+. ..+++..|..+.. .|++++|..+++++++.-
T Consensus 227 ferAL~L------nP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~ 270 (301)
T 3u64_A 227 FEHLTRY------CSAHDPDHHITYADALCIPLNNRAGFDEALDRALAID 270 (301)
T ss_dssp HHHHHHH------CCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCC
T ss_pred HHHHHHh------CCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCC
Confidence 9999999 7754 8889999999988 599999999999999754
No 214
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.51 E-value=0.0031 Score=57.73 Aligned_cols=105 Identities=8% Similarity=-0.048 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC-
Q 020735 208 ELLSRLKTGKNFLRNQ--DLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGE- 284 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g--~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d- 284 (322)
.....+..|++....| ++.+|...|+++.+..+ + +.....+++ ++..+|++++|.+.+++.++.....+.
T Consensus 175 ~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p---~-~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k 247 (310)
T 3mv2_B 175 EMILNLAESYIKFATNKETATSNFYYYEELSQTFP---T-WKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQK 247 (310)
T ss_dssp HHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSC---S-HHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTC
T ss_pred HHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCC---C-cccHHHHHH---HHHHcCCHHHHHHHHHHHHHhccccccc
Confidence 4445555566677777 99999999999765433 2 222334444 899999999999999988777544322
Q ss_pred ---CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhc
Q 020735 285 ---YSGSTEAYGAIADCYTELGDLERAARFYDKYISRLES 321 (322)
Q Consensus 285 ---~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~ 321 (322)
++..+.++.|+..+...+|+ +|.++++++.+..++
T Consensus 248 ~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~ 285 (310)
T 3mv2_B 248 ENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLDHE 285 (310)
T ss_dssp HHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCC
T ss_pred ccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCC
Confidence 26688999999999999998 899999998876654
No 215
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.34 E-value=0.00014 Score=70.04 Aligned_cols=94 Identities=12% Similarity=0.159 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH---------H
Q 020735 211 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISE---------R 281 (322)
Q Consensus 211 ~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~---------~ 281 (322)
++..+|..++..|+|++|..+|.++ ..+..++.++.++|+|++|++.++++..... .
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a--------------~n~~~LA~~L~~Lg~yq~AVea~~KA~~~~~Wk~v~~aCv~ 189 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV--------------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVD 189 (449)
T ss_dssp -------------CTTTHHHHHHHT--------------TCHHHHHHHHHTTTCHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh--------------hhHHHHHHHHHHhccHHHHHHHHHHcCCchhHHHHHHHHHH
Confidence 7788899999999999999998866 2477888999999999999999988732200 0
Q ss_pred cCC----------CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020735 282 EGE----------YSGSTEAYGAIADCYTELGDLERAARFYDKYISR 318 (322)
Q Consensus 282 ~~d----------~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i 318 (322)
.++ -...++-...+..+|...|++++|+.++++++.+
T Consensus 190 ~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~l 236 (449)
T 1b89_A 190 GKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGL 236 (449)
T ss_dssp TTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred cCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCC
Confidence 000 0001111223558899999999999999999754
No 216
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.08 E-value=0.0097 Score=49.25 Aligned_cols=124 Identities=11% Similarity=0.099 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Q 020735 162 VNEQLRQINAALRRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQN 241 (322)
Q Consensus 162 l~~~l~~~~~~l~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~ 241 (322)
+.+++..+.....++.++-.....+..... ....-.....+.++...|..++..++|.+|...|++|+++.+.
T Consensus 23 l~dqik~L~d~~LY~sA~~La~lLlSl~~~-------~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~ 95 (167)
T 3ffl_A 23 VIDHVRDMAAAGLHSNVRLLSSLLLTLSNN-------NPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKA 95 (167)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-------STTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhcC-------CcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH
Confidence 334444444444444454444444443321 0012234557888999999999999999999999999998875
Q ss_pred CCChH-------------------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHH
Q 020735 242 VKDPI-------------------EEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCY 299 (322)
Q Consensus 242 ~~d~~-------------------~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y 299 (322)
+.... .+.+..|.++.+|...+++++|+..++.. ....-.+.....||..|
T Consensus 96 l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~I-------p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 96 LSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGI-------PSRQRTPKINMLLANLY 165 (167)
T ss_dssp C--------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTS-------CGGGCCHHHHHHHHHHC
T ss_pred HhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcC-------CchhcCHHHHHHHHHHh
Confidence 42211 12367789999999999999999987652 11222344555566655
No 217
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.02 E-value=0.00014 Score=69.96 Aligned_cols=81 Identities=15% Similarity=0.117 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHH
Q 020735 211 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTE 290 (322)
Q Consensus 211 ~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~ 290 (322)
....++.+|.+.|+++++.++++. + ...++.++|..+...|+|++|+.+|.++ .
T Consensus 96 i~~~Li~~Y~Klg~l~e~e~f~~~-----p-------n~~a~~~IGd~~~~~g~yeeA~~~Y~~a--------------~ 149 (449)
T 1b89_A 96 VETELIFALAKTNRLAELEEFING-----P-------NNAHIQQVGDRCYDEKMYDAAKLLYNNV--------------S 149 (449)
T ss_dssp -------------CHHHHTTTTTC-----C-----------------------CTTTHHHHHHHT--------------T
T ss_pred hHHHHHHHHHHhCCHHHHHHHHcC-----C-------cHHHHHHHHHHHHHcCCHHHHHHHHHHh--------------h
Confidence 445578888889999998877753 1 2248999999999999999999999975 2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020735 291 AYGAIADCYTELGDLERAARFYDKYIS 317 (322)
Q Consensus 291 a~~~Lg~~y~~~gd~e~A~~~~~kAl~ 317 (322)
.|..+|.++..+|+|++|.+.|+++..
T Consensus 150 n~~~LA~~L~~Lg~yq~AVea~~KA~~ 176 (449)
T 1b89_A 150 NFGRLASTLVHLGEYQAAVDGARKANS 176 (449)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHhccHHHHHHHHHHcCC
Confidence 588899999999999999999999843
No 218
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=96.87 E-value=0.003 Score=57.21 Aligned_cols=74 Identities=15% Similarity=0.005 Sum_probs=63.7
Q ss_pred ccCCcHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHhCCChHHH-HHHHHHHHHHHHH-cCCHHHHHHHHH
Q 020735 201 IVDPKKEELLSRLKTGKNFLRN-----QDLEKAFTEFKAALELAQNVKDPIEE-KKAARGLGASLQR-QGKYREAIKYHS 273 (322)
Q Consensus 201 ~~~~~~~~a~~~~~la~~y~~~-----g~~~~Al~~~~kAl~l~~~~~d~~~~-~~a~~~LG~~~~~-~gd~~eAi~~~~ 273 (322)
..+++.....++..+|..|... |+.++|..+|++|+++.|. . ..+++..|..+.. .|++++|..+++
T Consensus 191 eLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~------~~id~~v~YA~~l~~~~gd~~~a~~~L~ 264 (301)
T 3u64_A 191 DLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSA------HDPDHHITYADALCIPLNNRAGFDEALD 264 (301)
T ss_dssp HHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCT------TCSHHHHHHHHHTTTTTTCHHHHHHHHH
T ss_pred HhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCC------CCchHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 4556666778899999999995 9999999999999999996 4 6778888988887 599999999999
Q ss_pred HHHHHHH
Q 020735 274 MVLQISE 280 (322)
Q Consensus 274 kaL~l~~ 280 (322)
++++...
T Consensus 265 kAL~a~p 271 (301)
T 3u64_A 265 RALAIDP 271 (301)
T ss_dssp HHHHCCG
T ss_pred HHHcCCC
Confidence 9998833
No 219
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=96.85 E-value=0.0033 Score=58.95 Aligned_cols=106 Identities=11% Similarity=0.009 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcC----CHHHHHHHHHHHHHHHH
Q 020735 208 ELLSRLKTGKNFLRNQD---LEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQG----KYREAIKYHSMVLQISE 280 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~---~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~g----d~~eAi~~~~kaL~l~~ 280 (322)
.++.++..|..+...++ +.+|+.+|++|+++.|. .+.++-.++.+|.... ..........++++...
T Consensus 195 ~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~------~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~ 268 (372)
T 3ly7_A 195 ALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPE------FTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIV 268 (372)
T ss_dssp GGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHH
Confidence 45666677777776654 58999999999999998 7777777777765321 11233344445555434
Q ss_pred HcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 020735 281 REGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRL 319 (322)
Q Consensus 281 ~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~ 319 (322)
.....+..+.++..+|..+...|++++|..++++|+++-
T Consensus 269 a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln 307 (372)
T 3ly7_A 269 TLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLE 307 (372)
T ss_dssp TCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred hcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC
Confidence 444456678889999999999999999999999999874
No 220
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.75 E-value=0.05 Score=52.19 Aligned_cols=113 Identities=10% Similarity=0.002 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCc
Q 020735 207 EELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYS 286 (322)
Q Consensus 207 ~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~ 286 (322)
..+.....++..|...|++.+|.+.......-.....+.......+......|...+|+.+|...++++.........++
T Consensus 135 erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~ 214 (445)
T 4b4t_P 135 ERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYE 214 (445)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcH
Confidence 45667788999999999999999999988766656677777888888899999999999999999999865544444444
Q ss_pred -hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 020735 287 -GSTEAYGAIADCYTELGDLERAARFYDKYISRL 319 (322)
Q Consensus 287 -~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~ 319 (322)
.....+...|..+...++|.+|..+|..+.+..
T Consensus 215 ~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~~ 248 (445)
T 4b4t_P 215 SLKLEYYNLLVKISLHKREYLEVAQYLQEIYQTD 248 (445)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcc
Confidence 355667788999999999999999999887643
No 221
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.55 E-value=0.012 Score=46.62 Aligned_cols=68 Identities=13% Similarity=0.044 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHcCCHHH---HHHHHHHHHHHHHHcCCCc-hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 248 EKKAARGLGASLQRQGKYRE---AIKYHSMVLQISEREGEYS-GSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 248 ~~~a~~~LG~~~~~~gd~~e---Ai~~~~kaL~l~~~~~d~~-~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
...+.+++++++....+..+ +|..++..+.. +.| ..-+++|.||..+.++|+|++|..+.+..|++-+
T Consensus 34 s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~-----~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP 105 (126)
T 1nzn_A 34 SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPK-----GSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEP 105 (126)
T ss_dssp CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTT-----SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-----CCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCC
Confidence 34556666666666655554 55555554332 112 4556777777777777777777777777766543
No 222
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.49 E-value=0.043 Score=43.33 Aligned_cols=75 Identities=16% Similarity=0.141 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHcCCHHH---HHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCC
Q 020735 209 LLSRLKTGKNFLRNQDLEK---AFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEY 285 (322)
Q Consensus 209 a~~~~~la~~y~~~g~~~~---Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~ 285 (322)
..+.++.|+++.+..+... ++..++..+.. .++...-..+|.||..+++.|+|++|..+++..|++ .
T Consensus 35 ~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~----~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~------e 104 (126)
T 1nzn_A 35 KSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPK----GSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT------E 104 (126)
T ss_dssp HHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTT----SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------C
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc----CCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh------C
Confidence 4577888999888777666 66666665542 223356788999999999999999999999999999 6
Q ss_pred chHHHHHH
Q 020735 286 SGSTEAYG 293 (322)
Q Consensus 286 ~~~a~a~~ 293 (322)
|.+..+..
T Consensus 105 P~n~QA~~ 112 (126)
T 1nzn_A 105 PQNNQAKE 112 (126)
T ss_dssp TTCHHHHH
T ss_pred CCCHHHHH
Confidence 75554443
No 223
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=96.46 E-value=0.26 Score=46.46 Aligned_cols=98 Identities=15% Similarity=0.087 Sum_probs=84.3
Q ss_pred cCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Q 020735 222 NQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTE 301 (322)
Q Consensus 222 ~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~ 301 (322)
.+..+.-++...++++.+..-+-.+.....-..||..|+..|+|.+|.+.+.+.++-++..++.....+.+..-..+|..
T Consensus 72 ~~~~~~~~~~~~~~~~~a~~~~r~flr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~ 151 (394)
T 3txn_A 72 DAGTGIEVQLCKDCIEWAKQEKRTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHA 151 (394)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH
Confidence 35667777788888888887555555555667999999999999999999999999998888888888999999999999
Q ss_pred cCCHHHHHHHHHHHHHhh
Q 020735 302 LGDLERAARFYDKYISRL 319 (322)
Q Consensus 302 ~gd~e~A~~~~~kAl~i~ 319 (322)
++++.++..+|.+|..+.
T Consensus 152 ~~n~~k~k~~l~~a~~~~ 169 (394)
T 3txn_A 152 LSNLPKARAALTSARTTA 169 (394)
T ss_dssp TTCHHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHhhh
Confidence 999999999999998765
No 224
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.34 E-value=0.022 Score=54.36 Aligned_cols=105 Identities=10% Similarity=0.042 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHH
Q 020735 211 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTE 290 (322)
Q Consensus 211 ~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~ 290 (322)
+...+|..|+..|++++|.+.|.++.......+. ....+..+-.++...+|+..+..++.++-.+....++......
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~---kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~ 209 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGA---KIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNR 209 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCS---HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHH---HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHH
Confidence 4567999999999999999999999887765544 3456677778888999999999999999888777666555666
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020735 291 AYGAIADCYTELGDLERAARFYDKYISR 318 (322)
Q Consensus 291 a~~~Lg~~y~~~gd~e~A~~~~~kAl~i 318 (322)
....-|..+...++|.+|..+|-.+..-
T Consensus 210 lk~~~gl~~l~~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 210 YKTYYGIHCLAVRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp HHHHHHHGGGGTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHhcc
Confidence 6677788999999999999999887654
No 225
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=95.40 E-value=0.11 Score=52.52 Aligned_cols=104 Identities=11% Similarity=-0.001 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHH-HHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH------
Q 020735 209 LLSRLKTGKNFLRNQDLEKAF-TEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISER------ 281 (322)
Q Consensus 209 a~~~~~la~~y~~~g~~~~Al-~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~------ 281 (322)
...++..|......|+.++|. ..|++|+...|. ....+..++......|++++|.+.|++++.....
T Consensus 343 ~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~------s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~ 416 (679)
T 4e6h_A 343 PEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPN------SAVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALM 416 (679)
T ss_dssp HHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhh
Confidence 446677788888889999997 999999987775 4455677888888999999999999999986321
Q ss_pred --cCCC--------chHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020735 282 --EGEY--------SGSTEAYGAIADCYTELGDLERAARFYDKYISR 318 (322)
Q Consensus 282 --~~d~--------~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i 318 (322)
.+.. .....+|...+......|+.+.|...|.+|++.
T Consensus 417 ~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~ 463 (679)
T 4e6h_A 417 EDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRL 463 (679)
T ss_dssp HHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHT
T ss_pred hccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 1100 024556777788888888999999999999865
No 226
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=94.61 E-value=0.6 Score=43.63 Aligned_cols=106 Identities=12% Similarity=0.044 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----C-CChHH----------HHHHHHHHHHHHHHcCCHHHHHHHH
Q 020735 209 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQN-----V-KDPIE----------EKKAARGLGASLQRQGKYREAIKYH 272 (322)
Q Consensus 209 a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~-----~-~d~~~----------~~~a~~~LG~~~~~~gd~~eAi~~~ 272 (322)
.......|......++.+.|.+.+.+|+.++.. . ...+. ...+...++..+...|++.+|+..+
T Consensus 115 f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l 194 (388)
T 2ff4_A 115 FVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAEL 194 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 344455566666779999999999999987632 1 11111 2234567788888999999999999
Q ss_pred HHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 273 SMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 273 ~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
.+.+.. +|..-.++..+-.++...|+..+|+..|+++-+.+.
T Consensus 195 ~~~~~~------~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~ 236 (388)
T 2ff4_A 195 EALTFE------HPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLA 236 (388)
T ss_dssp HHHHHH------STTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 999888 888788999999999999999999999999877653
No 227
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=94.52 E-value=0.3 Score=49.35 Aligned_cols=101 Identities=7% Similarity=0.031 Sum_probs=75.1
Q ss_pred HHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHH
Q 020735 213 LKTGKNFLRN-QDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEA 291 (322)
Q Consensus 213 ~~la~~y~~~-g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a 291 (322)
...|..-+.. ++++.|...|+++++..+. ....+...+......|+.+.|...|++++.... +.......
T Consensus 473 i~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~------~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~---~~~~~~~l 543 (679)
T 4e6h_A 473 LENAYIEYHISKDTKTACKVLELGLKYFAT------DGEYINKYLDFLIYVNEESQVKSLFESSIDKIS---DSHLLKMI 543 (679)
T ss_dssp HHHHHHHHTTTSCCHHHHHHHHHHHHHHTT------CHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSS---STTHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHCCC------chHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcC---CHHHHHHH
Confidence 3345544444 4589999999999998886 344444556667778999999999999987622 11145567
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhhhcC
Q 020735 292 YGAIADCYTELGDLERAARFYDKYISRLESD 322 (322)
Q Consensus 292 ~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e~d 322 (322)
+......-...|+.+.+...++++.+.++++
T Consensus 544 w~~~~~fE~~~G~~~~~~~v~~R~~~~~P~~ 574 (679)
T 4e6h_A 544 FQKVIFFESKVGSLNSVRTLEKRFFEKFPEV 574 (679)
T ss_dssp HHHHHHHHHHTCCSHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 7777888888999999999999999887653
No 228
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=94.49 E-value=0.32 Score=38.62 Aligned_cols=66 Identities=15% Similarity=0.118 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHcCCH---HHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 020735 249 KKAARGLGASLQRQGKY---REAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRL 319 (322)
Q Consensus 249 ~~a~~~LG~~~~~~gd~---~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~ 319 (322)
..+.+++++++.+..+. .++|..++..++. ++...-+++|.||..+.++|+|++|..+.+..+++-
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~-----~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~e 108 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKE-----AESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHE 108 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHH-----CGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTC
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-----CcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhC
Confidence 34555666666555443 3456666554443 122456667777777777777777777777666544
No 229
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.39 E-value=0.11 Score=50.69 Aligned_cols=79 Identities=11% Similarity=0.090 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHH
Q 020735 211 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTE 290 (322)
Q Consensus 211 ~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~ 290 (322)
.+..+|........++.|..+|.+|..+.|. .+..++.||.+....|+.-+|+-+|.+++.. ....+.
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~------~G~~~nqLavla~~~~~~l~a~y~y~rsl~~------~~Pf~~ 221 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPS------NGQPYNQLAILASSKGDHLTTIFYYCRSIAV------KFPFPA 221 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT------BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSS------SBCCHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCC------CCchHHHHHHHHhcccccHHHHHHHHHHHhc------CCCChh
Confidence 5678999999999999999999999999999 7888999999999999999999999998854 333455
Q ss_pred HHHHHHHHHHH
Q 020735 291 AYGAIADCYTE 301 (322)
Q Consensus 291 a~~~Lg~~y~~ 301 (322)
+..||...+..
T Consensus 222 a~~nL~~~f~~ 232 (497)
T 1ya0_A 222 ASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55565555543
No 230
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=94.30 E-value=0.46 Score=38.17 Aligned_cols=68 Identities=13% Similarity=0.094 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHcCCHH---HHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 248 EKKAARGLGASLQRQGKYR---EAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 248 ~~~a~~~LG~~~~~~gd~~---eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
...+.+++++++....+.. ++|..++..+.. ++...-+++|.||..+.++|+|++|..+.+..|++-+
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~-----~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP 108 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKE-----AESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHER 108 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHH-----CCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCC
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-----CccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence 4556777777777766544 566677665553 2225677888889999999999999998888887644
No 231
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=94.11 E-value=0.37 Score=46.68 Aligned_cols=99 Identities=9% Similarity=0.084 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchH
Q 020735 209 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGS 288 (322)
Q Consensus 209 a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~ 288 (322)
..++..+-..|.+.|++++|.+.|++..+.. +.. ...+|..+=..|.+.|+.++|.+.|++-.+. +-.| .
T Consensus 105 ~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g--~~P---d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~----G~~P-d 174 (501)
T 4g26_A 105 EATFTNGARLAVAKDDPEMAFDMVKQMKAFG--IQP---RLRSYGPALFGFCRKGDADKAYEVDAHMVES----EVVP-E 174 (501)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT--CCC---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT----TCCC-C
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcC--CCC---ccceehHHHHHHHHCCCHHHHHHHHHHHHhc----CCCC-C
Confidence 3356667788889999999999999876521 111 3456777778899999999999999886532 3233 3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020735 289 TEAYGAIADCYTELGDLERAARFYDKYIS 317 (322)
Q Consensus 289 a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~ 317 (322)
...|..+-..|...|+.++|.+.+++.-+
T Consensus 175 ~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~ 203 (501)
T 4g26_A 175 EPELAALLKVSMDTKNADKVYKTLQRLRD 203 (501)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCHHHHHHHHHHHHH
Confidence 56788899999999999999999988654
No 232
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=93.81 E-value=0.54 Score=37.28 Aligned_cols=74 Identities=12% Similarity=0.183 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHcCCH---HHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCC
Q 020735 209 LLSRLKTGKNFLRNQDL---EKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEY 285 (322)
Q Consensus 209 a~~~~~la~~y~~~g~~---~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~ 285 (322)
..+.++.|.+..+..+. .+++..++..+...+ ...-..+|.|+..+++.|+|++|..+.+..+++ .
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~-----~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~------e 108 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAE-----SRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH------E 108 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCG-----GGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT------C
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCc-----chhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh------C
Confidence 45778888888877654 467777777665433 226778999999999999999999999999988 6
Q ss_pred chHHHHHH
Q 020735 286 SGSTEAYG 293 (322)
Q Consensus 286 ~~~a~a~~ 293 (322)
|.+..+..
T Consensus 109 P~N~QA~~ 116 (134)
T 3o48_A 109 RNNKQVGA 116 (134)
T ss_dssp TTCHHHHH
T ss_pred CCCHHHHH
Confidence 65444433
No 233
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=93.73 E-value=0.17 Score=49.17 Aligned_cols=64 Identities=17% Similarity=0.209 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020735 249 KKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISR 318 (322)
Q Consensus 249 ~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i 318 (322)
...+..||.+.+....+..|..+|.+|+.+ .|.....|+.||.++...|+.-+|..+|-+++..
T Consensus 152 hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~------~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~ 215 (497)
T 1ya0_A 152 QHCLVHLGDIARYRNQTSQAESYYRHAAQL------VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAV 215 (497)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSS
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHHHh------CCCCCchHHHHHHHHhcccccHHHHHHHHHHHhc
Confidence 346789999999999999999999999999 8888899999999999999999999999999853
No 234
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=93.57 E-value=0.7 Score=37.57 Aligned_cols=103 Identities=13% Similarity=0.061 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHcCCH------HHHHHHHHHHHHHHHhCC--ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Q 020735 211 SRLKTGKNFLRNQDL------EKAFTEFKAALELAQNVK--DPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISERE 282 (322)
Q Consensus 211 ~~~~la~~y~~~g~~------~~Al~~~~kAl~l~~~~~--d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~ 282 (322)
.+.......-..|+. ++-.+.|++|+...|... ........+...+.. ...+|.++|.+.|+.++.+
T Consensus 15 ~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~---- 89 (161)
T 4h7y_A 15 DWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARAN---- 89 (161)
T ss_dssp HHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHH----
T ss_pred HHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHH----
Confidence 333333444444787 888889999988776432 223344455555533 5669999999999999997
Q ss_pred CCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 283 GEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 283 ~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
....+..+...|.--..+|+..+|.+.+.+|+.+..
T Consensus 90 --hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~ 125 (161)
T 4h7y_A 90 --CKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGA 125 (161)
T ss_dssp --CTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred --hHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCC
Confidence 222388888889999999999999999999997654
No 235
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=93.43 E-value=0.6 Score=47.65 Aligned_cols=58 Identities=17% Similarity=0.163 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 020735 251 AARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDK 314 (322)
Q Consensus 251 a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~k 314 (322)
.+.--+..+..+|+|+-|++..++|+.. .|....+|+.|+.+|..+|||+.|+-.++.
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~------aPseF~tW~~La~vYi~l~d~e~ALLtLNS 396 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTEL------ALDSFESWYNLARCHIKKEEYEKALFAINS 396 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH------CSSCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhc------CchhhHHHHHHHHHHHHhccHHHHHHHHhc
Confidence 4555577778899999999999999999 888889999999999999999999976654
No 236
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=93.32 E-value=2.4 Score=38.43 Aligned_cols=102 Identities=12% Similarity=-0.007 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHcCC-CchH
Q 020735 211 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYR-EAIKYHSMVLQISEREGE-YSGS 288 (322)
Q Consensus 211 ~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~-eAi~~~~kaL~l~~~~~d-~~~~ 288 (322)
.++.-+..+.+.|++..|.+...-.++.+.+.+.+.. ......+..++.....-+ +=.++.+++++.+.+.++ ..+.
T Consensus 55 lL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~-~~~~~rl~~l~~~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gd 133 (312)
T 2wpv_A 55 LISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVD-DISVARLVRLIAELDPSEPNLKDVITGMNNWSIKFSEYKFGD 133 (312)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCS-HHHHHHHHHHHTTCCTTCTTHHHHHHHHHHHHHHTSSCTTCC
T ss_pred HHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCC-HHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHhhcCCCCCCC
Confidence 4455566677778888887765555555554332221 223445555554433222 346778899999998765 5578
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHH
Q 020735 289 TEAYGAIADCYTELGDLERAARFYD 313 (322)
Q Consensus 289 a~a~~~Lg~~y~~~gd~e~A~~~~~ 313 (322)
+..+..+|..|.+.|++.+|..+|-
T Consensus 134 p~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 134 PYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 8899999999999999999999884
No 237
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=93.31 E-value=0.61 Score=37.44 Aligned_cols=65 Identities=14% Similarity=0.226 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHcCCHH---HHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 020735 209 LLSRLKTGKNFLRNQDLE---KAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQI 278 (322)
Q Consensus 209 a~~~~~la~~y~~~g~~~---~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l 278 (322)
..+.++.|.++.+..+.+ +++..++..+.-.+ ...-..+|.|+..+++.|+|++|..+.+..|++
T Consensus 39 ~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~-----~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~ 106 (144)
T 1y8m_A 39 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAE-----SRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH 106 (144)
T ss_dssp HHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCC-----STHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCc-----cchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 457788888888876654 56777777666322 125667999999999999999999999999998
No 238
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=93.07 E-value=2.6 Score=38.64 Aligned_cols=101 Identities=13% Similarity=0.126 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHcCC-CchH
Q 020735 211 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKY-REAIKYHSMVLQISEREGE-YSGS 288 (322)
Q Consensus 211 ~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~-~eAi~~~~kaL~l~~~~~d-~~~~ 288 (322)
.++.-+..+.+.|++..|.+...-.++.+.+.+-+. .......+..++.....- .+=.++.+++++.+.+.++ ..+.
T Consensus 57 LL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~~-~~~~~~rL~~L~~~~~~~~p~r~~fi~~ai~WS~~~g~~~~Gd 135 (336)
T 3lpz_A 57 ILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQRV-DGASRGKLLGCLRLFQPGEPVRKRFVKEMIDWSKKFGDYPAGD 135 (336)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCC-CHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred HHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCC-CHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHhhcCCCCCCC
Confidence 344445556666666666665443333333321111 012333444444443321 2346677889999888654 5568
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHH
Q 020735 289 TEAYGAIADCYTELGDLERAARFY 312 (322)
Q Consensus 289 a~a~~~Lg~~y~~~gd~e~A~~~~ 312 (322)
+..+..+|..|.+.+++.+|..+|
T Consensus 136 p~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 136 PELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCHHHHHHHH
Confidence 889999999999999999999887
No 239
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=92.64 E-value=2.5 Score=35.23 Aligned_cols=95 Identities=14% Similarity=0.123 Sum_probs=69.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--HHHH---------
Q 020735 213 LKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQ--ISER--------- 281 (322)
Q Consensus 213 ~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~--l~~~--------- 281 (322)
+-++...+-.|+|..|+-.+.+. . .+.+.+.-..+|....||..|+..++..++ +-+.
T Consensus 37 lL~~I~LyyngEY~R~Lf~L~~l-----N------T~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ 105 (242)
T 3kae_A 37 MLMSIVLYLNGEYTRALFHLHKL-----N------TCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQE 105 (242)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTC-----C------BHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHT
T ss_pred hhhhhhhhhcchHhHHHHHHHhc-----c------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccce
Confidence 34677888899999988765431 1 345567778899999999999999999872 1100
Q ss_pred -cCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020735 282 -EGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISR 318 (322)
Q Consensus 282 -~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i 318 (322)
.-|+.+..-.+..+|.+....|+.++|+.+|.....+
T Consensus 106 ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~ 143 (242)
T 3kae_A 106 MFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGK 143 (242)
T ss_dssp TSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred eeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCC
Confidence 1122233445777899999999999999999887653
No 240
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=92.36 E-value=7.6 Score=36.77 Aligned_cols=85 Identities=14% Similarity=0.028 Sum_probs=67.7
Q ss_pred cCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 020735 202 VDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELA-QNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISE 280 (322)
Q Consensus 202 ~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~-~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~ 280 (322)
..+.......++.....|...+|+.+|...++++.... .....+......+...|..+...++|.+|-.+|..+.+...
T Consensus 170 ~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~~~ 249 (445)
T 4b4t_P 170 SMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQTDA 249 (445)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhccc
Confidence 34555677788888999999999999999999986544 44455566777788889999999999999999999988766
Q ss_pred HcCCCc
Q 020735 281 REGEYS 286 (322)
Q Consensus 281 ~~~d~~ 286 (322)
..++..
T Consensus 250 ~~~d~~ 255 (445)
T 4b4t_P 250 IKSDEA 255 (445)
T ss_dssp HHSCHH
T ss_pred ccCCHH
Confidence 555443
No 241
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=92.00 E-value=1.8 Score=41.59 Aligned_cols=104 Identities=6% Similarity=-0.176 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHH----------------------------------HHHHHHH
Q 020735 209 LLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIE----------------------------------EKKAARG 254 (322)
Q Consensus 209 a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~----------------------------------~~~a~~~ 254 (322)
...++..+..+...|+.++|...|++|+.. |....-+. ....+..
T Consensus 213 ~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~ 291 (493)
T 2uy1_A 213 EEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRIN 291 (493)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHH
Confidence 446666788888899999999999999987 54221110 0112223
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhhh
Q 020735 255 LGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELG-DLERAARFYDKYISRLE 320 (322)
Q Consensus 255 LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~g-d~e~A~~~~~kAl~i~e 320 (322)
.+....+.++.+.|...|+++ .. +......|...|......+ +++.|...|+++++.+.
T Consensus 292 y~~~~~r~~~~~~AR~i~~~A-~~------~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~ 351 (493)
T 2uy1_A 292 HLNYVLKKRGLELFRKLFIEL-GN------EGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHP 351 (493)
T ss_dssp HHHHHHHHHCHHHHHHHHHHH-TT------SCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCT
T ss_pred HHHHHHHcCCHHHHHHHHHHh-hC------CCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCC
Confidence 333333566778888888877 21 1112344554555555445 68999999999887654
No 242
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=91.27 E-value=6.6 Score=39.06 Aligned_cols=96 Identities=10% Similarity=-0.003 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHH------HHHHHhCCChHHHHHH---------HHHHHHHHHHcCCHHHHHHHHH-
Q 020735 210 LSRLKTGKNFLRNQDLEKAFTEFKAA------LELAQNVKDPIEEKKA---------ARGLGASLQRQGKYREAIKYHS- 273 (322)
Q Consensus 210 ~~~~~la~~y~~~g~~~~Al~~~~kA------l~l~~~~~d~~~~~~a---------~~~LG~~~~~~gd~~eAi~~~~- 273 (322)
..+..+|..+...++++.|+++|.++ ..++...++....... +.....+|...|++++|++.|.
T Consensus 682 ~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~~~~~ 761 (814)
T 3mkq_A 682 MKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLIK 761 (814)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHHHHHHHH
Confidence 36678999999999999999988774 3333444444332211 1112335666788888887775
Q ss_pred -----HHHHHHHHcCCCch--HHHHHHHHHHHHHHcCCHH
Q 020735 274 -----MVLQISEREGEYSG--STEAYGAIADCYTELGDLE 306 (322)
Q Consensus 274 -----kaL~l~~~~~d~~~--~a~a~~~Lg~~y~~~gd~e 306 (322)
+|+.+++..+. +. ........+.-....|+++
T Consensus 762 ~~~~~~A~~lA~~~~~-~~~~i~~~~~~~~~~L~~~~~~~ 800 (814)
T 3mkq_A 762 SQRFSEAAFLGSTYGL-GDNEVNDIVTKWKENLILNGKNT 800 (814)
T ss_dssp TTCHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHTTTCHH
T ss_pred cCChHHHHHHHHHhCC-ChHHHHHHHHHHHHHHHhccchh
Confidence 35566665443 22 4444555555556666543
No 243
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=89.26 E-value=2.7 Score=39.10 Aligned_cols=107 Identities=11% Similarity=0.045 Sum_probs=74.2
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccc--cccCC-----cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDE--VIVDP-----KKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPI 246 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~--~~~~~-----~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~ 246 (322)
+.+.+.+.+.+++..+.. ..+.... ..... ......+...++..+...|++++|+....+++...|-
T Consensus 130 ~~~~a~~~l~~Al~L~rG-~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~----- 203 (388)
T 2ff4_A 130 RFEQASRHLSAALREWRG-PVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEHPY----- 203 (388)
T ss_dssp CHHHHHHHHHHHHTTCCS-STTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-----
T ss_pred CHHHHHHHHHHHHHhcCC-CCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-----
Confidence 456677888888888743 1111110 00000 1122334556788889999999999999999988875
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HHcCCCch
Q 020735 247 EEKKAARGLGASLQRQGKYREAIKYHSMVLQIS-EREGEYSG 287 (322)
Q Consensus 247 ~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~-~~~~d~~~ 287 (322)
...++..+-.+++..|+..+|++.|++.-+.. ++.+-.|.
T Consensus 204 -~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~ 244 (388)
T 2ff4_A 204 -REPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPG 244 (388)
T ss_dssp -CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred -CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 55677888889999999999999999987754 44555554
No 244
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=88.81 E-value=3 Score=40.22 Aligned_cols=84 Identities=14% Similarity=0.149 Sum_probs=62.8
Q ss_pred CHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcC
Q 020735 224 DLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELG 303 (322)
Q Consensus 224 ~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~g 303 (322)
+.++|.+.|++..+. .+.. ...+|..+-..|.+.|++++|.+.|++..+. +-.| ....|..+=..|...|
T Consensus 85 ~l~~A~~lf~~M~~~--G~~P---d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~----g~~P-d~~tyn~lI~~~~~~g 154 (501)
T 4g26_A 85 GLSRGFDIFKQMIVD--KVVP---NEATFTNGARLAVAKDDPEMAFDMVKQMKAF----GIQP-RLRSYGPALFGFCRKG 154 (501)
T ss_dssp HHHHHHHHHHHHHHT--TCCC---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT----TCCC-CHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHh--CCCC---CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCCC-ccceehHHHHHHHHCC
Confidence 367888888776542 1111 3456788888999999999999999885432 3233 3567888889999999
Q ss_pred CHHHHHHHHHHHHH
Q 020735 304 DLERAARFYDKYIS 317 (322)
Q Consensus 304 d~e~A~~~~~kAl~ 317 (322)
+.++|.+.|++..+
T Consensus 155 ~~~~A~~l~~~M~~ 168 (501)
T 4g26_A 155 DADKAYEVDAHMVE 168 (501)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999998764
No 245
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=88.15 E-value=0.45 Score=46.30 Aligned_cols=110 Identities=9% Similarity=-0.035 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHcCCHHHHH----------HHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 020735 210 LSRLKTGKNFLRNQDLEKAF----------TEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQIS 279 (322)
Q Consensus 210 ~~~~~la~~y~~~g~~~~Al----------~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~ 279 (322)
..+++.+..+-..|+..... ..+..++..+--..|....+..++.+-..|...+.|++|..+..++. ..
T Consensus 182 k~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr~D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~-fP 260 (523)
T 4b4t_S 182 KLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLKHDNETKAMLINLILRDFLNNGEVDSASDFISKLE-YP 260 (523)
T ss_dssp ---------------------CHHHHHHHHTHHHHHHHHCCSCSSSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC-SC
T ss_pred HHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHhcccCcchhHHHHHHHHHHHHccCcHHHHHHHHhcCc-CC
Confidence 34555556665566555432 13334444333345666677778888899999999999999999873 11
Q ss_pred HHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 280 EREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 280 ~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
+....+...+.-+|.+|.++.-+++|.+|.+++..|++..+
T Consensus 261 ~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap 301 (523)
T 4b4t_S 261 HTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAP 301 (523)
T ss_dssp TTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCS
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 11112233566788899999999999999999999986543
No 246
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=83.99 E-value=2.7 Score=42.88 Aligned_cols=59 Identities=17% Similarity=0.095 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 020735 211 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMV 275 (322)
Q Consensus 211 ~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~ka 275 (322)
.+..-+.-+...|+|+-|+...++|...+|. .-.+|+.|+.+|..+|||+.|+-.+..+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPs------eF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALD------SFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS------CHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCch------hhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 3344567777899999999999999999998 8889999999999999999999877654
No 247
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=83.70 E-value=14 Score=34.61 Aligned_cols=92 Identities=14% Similarity=0.031 Sum_probs=74.1
Q ss_pred HHHHHHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHH
Q 020735 174 RRQAKIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAAR 253 (322)
Q Consensus 174 ~~e~al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~ 253 (322)
+.+.|.+.|.+....... .+ ..+..++..-.++...+|+..+..++.++..+....+++........
T Consensus 146 d~~~A~~~~~~~~~~~~~----------~~---~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~ 212 (429)
T 4b4t_R 146 DKDNAEKTLGKSLSKAIS----------TG---AKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKT 212 (429)
T ss_dssp CCTTHHHHHHHHHHHHTC----------CC---SHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCC----------hH---HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHH
Confidence 667777777777765533 11 25567777788888899999999999999999888888888777777
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHH
Q 020735 254 GLGASLQRQGKYREAIKYHSMVLQI 278 (322)
Q Consensus 254 ~LG~~~~~~gd~~eAi~~~~kaL~l 278 (322)
..|..+...++|.+|-.+|..+...
T Consensus 213 ~~gl~~l~~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 213 YYGIHCLAVRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp HHHHGGGGTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhChHHHHHHHHHHHhcc
Confidence 8888899999999999999887654
No 248
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=83.51 E-value=4.9 Score=32.59 Aligned_cols=87 Identities=10% Similarity=0.051 Sum_probs=65.3
Q ss_pred HHHHHHhHhhhcccCCCCCccccccCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHH
Q 020735 178 KIESYAPSLSYAPVGSRIPEDEVIVDPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGA 257 (322)
Q Consensus 178 al~~y~~al~~~~~~~~~~~~~~~~~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~ 257 (322)
-.+.|.+++...|.. . .......+..+...|.. ...+|.++|.+.|+.++++.+. .+..+...+.
T Consensus 38 lrd~YerAia~~Pp~-----k---~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKk------FAKiwi~~Aq 102 (161)
T 4h7y_A 38 LIGRYSQAIEALPPD-----K---YGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKK------FAFVHISFAQ 102 (161)
T ss_dssp HHHHHHHHHHHSCGG-----G---GTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTT------BHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcc-----c---cccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHH------HHHHHHHHHH
Confidence 345677788777652 1 22344566666666644 5668999999999999997444 3777888888
Q ss_pred HHHHcCCHHHHHHHHHHHHHHH
Q 020735 258 SLQRQGKYREAIKYHSMVLQIS 279 (322)
Q Consensus 258 ~~~~~gd~~eAi~~~~kaL~l~ 279 (322)
.-.++|+..+|.+.+.+|+.++
T Consensus 103 FEiRqgnl~kARkILg~AiG~~ 124 (161)
T 4h7y_A 103 FELSQGNVKKSKQLLQKAVERG 124 (161)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHcccHHHHHHHHHHHhccC
Confidence 8889999999999999999873
No 249
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=83.35 E-value=18 Score=30.14 Aligned_cols=70 Identities=20% Similarity=0.206 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--HHHh----------CCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 020735 209 LLSRLKTGKNFLRNQDLEKAFTEFKAALE--LAQN----------VKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVL 276 (322)
Q Consensus 209 a~~~~~la~~y~~~g~~~~Al~~~~kAl~--l~~~----------~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL 276 (322)
+.+.+..+.+|....+|.+|+...++.++ ..++ .-|+.....-+..+|.+....|+-+|||.++..+.
T Consensus 62 ~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf 141 (242)
T 3kae_A 62 CTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSF 141 (242)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhc
Confidence 55778889999999999999999999883 1111 11222233456778999999999999999999887
Q ss_pred HH
Q 020735 277 QI 278 (322)
Q Consensus 277 ~l 278 (322)
..
T Consensus 142 ~~ 143 (242)
T 3kae_A 142 GK 143 (242)
T ss_dssp HH
T ss_pred CC
Confidence 65
No 250
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=82.55 E-value=13 Score=36.78 Aligned_cols=45 Identities=20% Similarity=0.177 Sum_probs=32.5
Q ss_pred HHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 020735 220 LRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMV 275 (322)
Q Consensus 220 ~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~ka 275 (322)
...|++++|.+ +++.+.++ ..+..+|..+.+.++++.|+.+|.++
T Consensus 663 l~~~~~~~A~~-------~~~~~~~~----~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 663 LKVGQLTLARD-------LLTDESAE----MKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHTCHHHHHH-------HHTTCCCH----HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhcCCHHHHHH-------HHHhhCcH----hHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 44455555544 44544433 46789999999999999999999875
No 251
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=82.21 E-value=9.7 Score=40.26 Aligned_cols=100 Identities=17% Similarity=0.097 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-hCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchH
Q 020735 210 LSRLKTGKNFLRNQDLEKAFTEFKAALELAQ-NVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGS 288 (322)
Q Consensus 210 ~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~-~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~ 288 (322)
..+..+-..|.+.|+.++|...|.+..+... .... ...+|+-|-..|.+.|+.++|.+.|++-.+ .+-.| +
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~P---dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~----~G~~P-D 199 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLL---TLDMYNAVMLGWARQGAFKELVYVLFMVKD----AGLTP-D 199 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTC---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHH----TTCCC-C
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCC---CHhHHHHHHHHHHhCCCHHHHHHHHHHHHH----cCCCC-c
Confidence 3556677888999999999999977654321 1111 355788888899999999999999988543 34344 3
Q ss_pred HHHHHHHHHHHHHcCC-HHHHHHHHHHHHH
Q 020735 289 TEAYGAIADCYTELGD-LERAARFYDKYIS 317 (322)
Q Consensus 289 a~a~~~Lg~~y~~~gd-~e~A~~~~~kAl~ 317 (322)
...|..+=.++...|+ .++|.+.+++..+
T Consensus 200 vvTYntLI~glcK~G~~~e~A~~Ll~EM~~ 229 (1134)
T 3spa_A 200 LLSYAAALQCMGRQDQDAGTIERCLEQMSQ 229 (1134)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 5567777778888887 4788898887764
No 252
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=80.53 E-value=23 Score=29.19 Aligned_cols=26 Identities=15% Similarity=-0.141 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHH
Q 020735 250 KAARGLGASLQRQGKYREAIKYHSMV 275 (322)
Q Consensus 250 ~a~~~LG~~~~~~gd~~eAi~~~~ka 275 (322)
..|..||......|+++-|+++|.++
T Consensus 35 ~~Wk~Lg~~AL~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 35 ITWERLIQEALAQGNASLAEMIYQTQ 60 (177)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHh
Confidence 34666666666666666666666653
No 253
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=80.08 E-value=3.9 Score=39.26 Aligned_cols=91 Identities=15% Similarity=0.033 Sum_probs=54.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHcCCCchHHH
Q 020735 212 RLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQG-KYREAIKYHSMVLQISEREGEYSGSTE 290 (322)
Q Consensus 212 ~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~g-d~~eAi~~~~kaL~l~~~~~d~~~~a~ 290 (322)
+...+....+.++.+.|...|++| . .+.. ....+...+..-+..+ +++.|...|+.+++.. +..+.
T Consensus 289 w~~y~~~~~r~~~~~~AR~i~~~A-~-~~~~-----~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~------~~~~~ 355 (493)
T 2uy1_A 289 RINHLNYVLKKRGLELFRKLFIEL-G-NEGV-----GPHVFIYCAFIEYYATGSRATPYNIFSSGLLKH------PDSTL 355 (493)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHH-T-TSCC-----CHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHC------TTCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHh-h-CCCC-----ChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHC------CCCHH
Confidence 333444445677899999999988 2 2221 1223333444444444 6999999999998862 22223
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHH
Q 020735 291 AYGAIADCYTELGDLERAARFYDKY 315 (322)
Q Consensus 291 a~~~Lg~~y~~~gd~e~A~~~~~kA 315 (322)
.+...+......|+.++|...|+++
T Consensus 356 ~~~~yid~e~~~~~~~~aR~l~er~ 380 (493)
T 2uy1_A 356 LKEEFFLFLLRIGDEENARALFKRL 380 (493)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3333455556677777777777664
No 254
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=79.17 E-value=5.5 Score=42.44 Aligned_cols=101 Identities=14% Similarity=0.083 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH-----------------HHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 020735 211 SRLKTGKNFLRNQDLEKAFTEFKAALEL-----------------AQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHS 273 (322)
Q Consensus 211 ~~~~la~~y~~~g~~~~Al~~~~kAl~l-----------------~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~ 273 (322)
..+.+|.+|...|++++|.++|+++-.- .+...........|+.+...+-+.+.++.+++..+
T Consensus 844 ~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~ 923 (1139)
T 4fhn_B 844 AVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSL 923 (1139)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4578999999999999999999876321 11111111123456778888889999999999999
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHH
Q 020735 274 MVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFY 312 (322)
Q Consensus 274 kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~ 312 (322)
.||+.... ++.......|.++=..+...|+|++|....
T Consensus 924 lAi~~~~~-~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL 961 (1139)
T 4fhn_B 924 LADASKET-DDEDLSIAITHETLKTACAAGKFDAAHVAL 961 (1139)
T ss_dssp HHHHHCCS-CCHHHHHHHHHHHHHHHHHHCCSGGGGHHH
T ss_pred HHHHhccC-CChhhHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 99876321 222223446778888889999999997665
No 255
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=75.44 E-value=5.1 Score=38.95 Aligned_cols=73 Identities=14% Similarity=0.033 Sum_probs=57.6
Q ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC-CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 020735 205 KKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNV-KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQIS 279 (322)
Q Consensus 205 ~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~-~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~ 279 (322)
...++..+.-+-..|...+.|+.|..+..++. .|.. ......+..+|.+|.++..+++|.+|.+++..|+..+
T Consensus 227 ~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rka 300 (523)
T 4b4t_S 227 NETKAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKA 300 (523)
T ss_dssp SCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSC
T ss_pred cchhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 33466677778889999999999999998874 3332 2334457778899999999999999999999988654
No 256
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=75.32 E-value=36 Score=31.51 Aligned_cols=102 Identities=7% Similarity=0.018 Sum_probs=70.9
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHHH----hC-------CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCC
Q 020735 217 KNFLRNQDLEKAFTEFKAALELAQ----NV-------KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEY 285 (322)
Q Consensus 217 ~~y~~~g~~~~Al~~~~kAl~l~~----~~-------~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~ 285 (322)
.+.....+.++|+++.++...... +. ............++..|...|+.++|..+.+++-......++.
T Consensus 84 ~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~ 163 (393)
T 4b4t_O 84 ASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSI 163 (393)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCS
T ss_pred HHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCc
Confidence 345566788999988876533221 10 0011234456677888999999999999999998888777654
Q ss_pred c--hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020735 286 S--GSTEAYGAIADCYTELGDLERAARFYDKYISR 318 (322)
Q Consensus 286 ~--~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i 318 (322)
. .....|...+..|...+++..+..+.-.++..
T Consensus 164 ~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~ 198 (393)
T 4b4t_O 164 PLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLST 198 (393)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 4 34555666788889999998887777666653
No 257
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=74.49 E-value=21 Score=37.21 Aligned_cols=71 Identities=13% Similarity=-0.051 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH-----------------HHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 020735 251 AARGLGASLQRQGKYREAIKYHSMVLQ-----------------ISEREGEYSGSTEAYGAIADCYTELGDLERAARFYD 313 (322)
Q Consensus 251 a~~~LG~~~~~~gd~~eAi~~~~kaL~-----------------l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~ 313 (322)
.-|-+|.+|...|++++|..+|++|-. +.............|..+..++...+-++.+++..+
T Consensus 842 ~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~ 921 (950)
T 4gq2_M 842 AVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSL 921 (950)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 347899999999999999999987531 111111122344567889999999999999999999
Q ss_pred HHHHhhhc
Q 020735 314 KYISRLES 321 (322)
Q Consensus 314 kAl~i~e~ 321 (322)
.||+.++.
T Consensus 922 lAI~~~~~ 929 (950)
T 4gq2_M 922 LADASKET 929 (950)
T ss_dssp HHHHTCCS
T ss_pred HHHhhccc
Confidence 99987654
No 258
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=72.67 E-value=8.3 Score=27.82 Aligned_cols=38 Identities=16% Similarity=0.286 Sum_probs=27.5
Q ss_pred CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 020735 203 DPKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 240 (322)
Q Consensus 203 ~~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~ 240 (322)
+|....+..+...|.-.-..|+|++|+.+|..+++..-
T Consensus 10 ~~~~~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll 47 (86)
T 4a5x_A 10 DPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLL 47 (86)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 45555666677777777888888888888888887643
No 259
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=70.10 E-value=37 Score=29.99 Aligned_cols=97 Identities=10% Similarity=0.010 Sum_probs=64.0
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH----------------
Q 020735 218 NFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISER---------------- 281 (322)
Q Consensus 218 ~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~---------------- 281 (322)
..++.|+.++|+......++-.|. .+.....|-..+.-.|+++.|.+.++.+.++..+
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~------da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~aE~ 79 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPK------DASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQ 79 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTT------CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCc------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHHHHH
Confidence 455678888888888888887776 6666667777788888888888888777666111
Q ss_pred -------------cCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 282 -------------EGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 282 -------------~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
.-..+........-+......|+.++|...-++|++..+
T Consensus 80 ~R~~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ap 131 (273)
T 1zbp_A 80 ARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQ 131 (273)
T ss_dssp HHHHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhcCc
Confidence 000111111222235556667888999888888877653
No 260
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=70.07 E-value=3.9 Score=29.14 Aligned_cols=27 Identities=26% Similarity=0.294 Sum_probs=13.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 020735 252 ARGLGASLQRQGKYREAIKYHSMVLQI 278 (322)
Q Consensus 252 ~~~LG~~~~~~gd~~eAi~~~~kaL~l 278 (322)
...+|.-|...|+|+.|+.+|+.+++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 334455555555555555555555443
No 261
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=67.57 E-value=21 Score=37.98 Aligned_cols=71 Identities=13% Similarity=-0.051 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH-----------------HHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 020735 251 AARGLGASLQRQGKYREAIKYHSMVLQ-----------------ISEREGEYSGSTEAYGAIADCYTELGDLERAARFYD 313 (322)
Q Consensus 251 a~~~LG~~~~~~gd~~eAi~~~~kaL~-----------------l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~ 313 (322)
..+-+|.++...|++++|..+|+++-. +..........+..|+.+..++.+.+-++.++++.+
T Consensus 844 ~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~ 923 (1139)
T 4fhn_B 844 AVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSL 923 (1139)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 458899999999999999999988631 111111122334567788899999999999999999
Q ss_pred HHHHhhhc
Q 020735 314 KYISRLES 321 (322)
Q Consensus 314 kAl~i~e~ 321 (322)
.|++...+
T Consensus 924 lAi~~~~~ 931 (1139)
T 4fhn_B 924 LADASKET 931 (1139)
T ss_dssp HHHHHCCS
T ss_pred HHHHhccC
Confidence 99987643
No 262
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=67.31 E-value=20 Score=26.32 Aligned_cols=30 Identities=27% Similarity=0.314 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 020735 249 KKAARGLGASLQRQGKYREAIKYHSMVLQI 278 (322)
Q Consensus 249 ~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l 278 (322)
+..+...+..+...|+|++||++.+++...
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa~y 44 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKATTY 44 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 334445555566666666666666665544
No 263
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=66.69 E-value=31 Score=31.91 Aligned_cols=85 Identities=13% Similarity=-0.013 Sum_probs=52.2
Q ss_pred HHHHHHHhCCChHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHH
Q 020735 234 AALELAQNVKDPIEEKKAARGLGASLQRQG--KYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARF 311 (322)
Q Consensus 234 kAl~l~~~~~d~~~~~~a~~~LG~~~~~~g--d~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~ 311 (322)
+.+=+.=+.+.-...+.++.+||..--..- ....++..|.+++..++..-.+. ....|..+|-.+...+++.+|..+
T Consensus 240 ~LLWLLyD~GhL~rYPmALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~-HvYPYtylgGy~yR~~~~reAl~~ 318 (472)
T 3re2_A 240 ELLWLLYDMGHIKTYPMAIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDH-HIYPYTYLGGYYYRKKKYYEAIAS 318 (472)
T ss_dssp HHHHHHHHTTTTTTCHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTC-CSHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHhccchhhCchhhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccC-CccchhhhhhhhhhcchHHHHHHH
Confidence 333333344444445666666666544322 22237888888888777654332 234566777788888888888888
Q ss_pred HHHHHHhh
Q 020735 312 YDKYISRL 319 (322)
Q Consensus 312 ~~kAl~i~ 319 (322)
+-.|-...
T Consensus 319 WA~Aa~Vi 326 (472)
T 3re2_A 319 WVDAGYVA 326 (472)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 87776544
No 264
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=65.94 E-value=12 Score=26.86 Aligned_cols=28 Identities=14% Similarity=0.152 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 020735 251 AARGLGASLQRQGKYREAIKYHSMVLQI 278 (322)
Q Consensus 251 a~~~LG~~~~~~gd~~eAi~~~~kaL~l 278 (322)
.+...|.-.-+.|+|++|+.+|.++++.
T Consensus 21 ~lv~~Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 21 KYAINAVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 3555565566666777777777666554
No 265
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=65.08 E-value=36 Score=35.43 Aligned_cols=87 Identities=14% Similarity=0.083 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH-----------------HHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 020735 211 SRLKTGKNFLRNQDLEKAFTEFKAALE-----------------LAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHS 273 (322)
Q Consensus 211 ~~~~la~~y~~~g~~~~Al~~~~kAl~-----------------l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~ 273 (322)
..+.+|.+|...|++++|..+|++|-. +.............|.+....+-..+-++.++...+
T Consensus 842 ~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~ 921 (950)
T 4gq2_M 842 AVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSL 921 (950)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 457899999999999999999987542 111111112233457788888889999999999999
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHHH
Q 020735 274 MVLQISEREGEYSGSTEAYGAIADC 298 (322)
Q Consensus 274 kaL~l~~~~~d~~~~a~a~~~Lg~~ 298 (322)
.||+.... +|.......+..+=..
T Consensus 922 lAI~~~~~-dd~~l~~~l~~r~f~~ 945 (950)
T 4gq2_M 922 LADASKET-DDEDLSIAITHETLKT 945 (950)
T ss_dssp HHHHTCCS-CCHHHHHHHHHHHHHH
T ss_pred HHHhhccc-CCccchHHHHHHHHHH
Confidence 99876431 2222333444444333
No 266
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=63.89 E-value=16 Score=26.06 Aligned_cols=34 Identities=21% Similarity=0.191 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 020735 207 EELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 240 (322)
Q Consensus 207 ~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~ 240 (322)
..+..+...|...-..|+|++|+.+|.++++...
T Consensus 17 ~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~ 50 (83)
T 2w2u_A 17 EMARKYAINAVKADKEGNAEEAITNYKKAIEVLA 50 (83)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 3555666778888889999999999999888654
No 267
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=63.41 E-value=21 Score=28.90 Aligned_cols=77 Identities=6% Similarity=-0.078 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCh--HHHHHHH-HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDP--IEEKKAA-RGLGASLQRQGKYREAIKYHSMVLQISEREGE 284 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~--~~~~~a~-~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d 284 (322)
.....+..|..+++.|+|=+|-+.++..-...+.-.+. .....+. ...|..+.+.|+...|...+.+++........
T Consensus 31 ~~~~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~L~~~~~ 110 (161)
T 2ijq_A 31 TLRRAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQYFRGVPN 110 (161)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTSCT
T ss_pred CccHHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCC
Confidence 34455677889999999999999998876644322112 2234444 55566677899999999999999987765543
No 268
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=63.17 E-value=14 Score=26.36 Aligned_cols=27 Identities=22% Similarity=0.394 Sum_probs=14.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 020735 252 ARGLGASLQRQGKYREAIKYHSMVLQI 278 (322)
Q Consensus 252 ~~~LG~~~~~~gd~~eAi~~~~kaL~l 278 (322)
+...|.-.-+.|+|++|+.+|.++++.
T Consensus 14 lv~~Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 14 YAILAVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 444454555556666666666655544
No 269
>1rij_A E6APN1 peptide; Trp-CAGE, E6-binding domain, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.32.1.1
Probab=62.61 E-value=2.1 Score=22.82 Aligned_cols=12 Identities=50% Similarity=0.772 Sum_probs=9.2
Q ss_pred cCCCCCCCCCCC
Q 020735 12 TRPSSVRSPPPD 23 (322)
Q Consensus 12 ~~~~~~~~~~~~ 23 (322)
..|+||+|+++.
T Consensus 13 ggpssgrppps~ 24 (26)
T 1rij_A 13 GGPSSGRPPPSX 24 (26)
T ss_dssp TGGGSSSCCCC-
T ss_pred CCCCCCCCCCCC
Confidence 368999999864
No 270
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=61.49 E-value=16 Score=26.78 Aligned_cols=34 Identities=21% Similarity=0.107 Sum_probs=28.7
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 287 GSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 287 ~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
+.+..+...+..+...|+|++|+++.++|...+.
T Consensus 13 n~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~ 46 (97)
T 2crb_A 13 NLAHQQSRRADRLLAAGKYEEAISCHRKATTYLS 46 (97)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 3566788899999999999999999999987653
No 271
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=61.16 E-value=42 Score=31.63 Aligned_cols=50 Identities=6% Similarity=-0.039 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020735 268 AIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISR 318 (322)
Q Consensus 268 Ai~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i 318 (322)
++..|.+++..++..-.+. ...-|..+|-.|...+++.+|..++-.|-..
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~-HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~V 347 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDE-HIYPYMYLAGYHCRNRNVREALQAWADTATV 347 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTC-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccC-CccceeecchhhhhcchHHHHHHHHHHHHHH
Confidence 5555555555555433222 1233445555566666666666655555443
No 272
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=60.70 E-value=19 Score=35.65 Aligned_cols=92 Identities=13% Similarity=0.016 Sum_probs=56.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHH
Q 020735 213 LKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAY 292 (322)
Q Consensus 213 ~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~ 292 (322)
..+|......+...++...+.+... ...+... .-...+.. .+.||++.|..++++.-. +........
T Consensus 256 ~~ia~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~e~~~r~A-lr~~d~~~a~~~~~~l~~------~~~~~~r~~ 322 (618)
T 1qsa_A 256 DIVAWRLMGNDVTDEQAKWRDDAIM---RSQSTSL---IERRVRMA-LGTGDRRGLNTWLARLPM------EAKEKDEWR 322 (618)
T ss_dssp HHHHHTSCSTTCCHHHHHHHHHHHH---TCCCHHH---HHHHHHHH-HHHTCHHHHHHHHHHSCT------TGGGSHHHH
T ss_pred HHHHHHHHHcCCChHHHHHHHhccc---cCCChHH---HHHHHHHH-HHCCCHHHHHHHHHHccc------cccccHhHH
Confidence 3344444545535566666665332 2233222 22333443 456999999888865322 122356678
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH
Q 020735 293 GAIADCYTELGDLERAARFYDKYIS 317 (322)
Q Consensus 293 ~~Lg~~y~~~gd~e~A~~~~~kAl~ 317 (322)
|-+|.++..+|+.++|..+|+++.+
T Consensus 323 YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 323 YWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 8899999999999999999888753
No 273
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=60.69 E-value=20 Score=25.51 Aligned_cols=33 Identities=18% Similarity=0.116 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 240 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~ 240 (322)
.+..+...|...-..|+|++|+.+|.++++..-
T Consensus 10 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~ 42 (83)
T 2v6y_A 10 MARKYAILAVKADKEGKVEDAITYYKKAIEVLS 42 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 455566678888888999999999999888654
No 274
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=60.49 E-value=17 Score=32.09 Aligned_cols=57 Identities=14% Similarity=0.166 Sum_probs=49.9
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 258 SLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 258 ~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
...+.|+.++|++.....++- .|.++..-..+-..+.-.|+|++|.+-++.+.++.+
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~------~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p 62 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKA------SPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFP 62 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHT------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCG
T ss_pred HHHhCCCHHHHHHHHHHHHHh------CCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCc
Confidence 356789999999999998888 888889999999999999999999999888876654
No 275
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=60.43 E-value=37 Score=31.94 Aligned_cols=71 Identities=7% Similarity=-0.043 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 020735 248 EKKAARGLGASLQRQG--KYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRL 319 (322)
Q Consensus 248 ~~~a~~~LG~~~~~~g--d~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~ 319 (322)
.+.++.+||..--..- ....+++.|++||..++..-.+. ....|..+|-.+...+++.+|..++-++-+..
T Consensus 261 YPmALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~~-hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi 333 (489)
T 4gq4_A 261 YPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDE-HIYPYMYLAGYHCRNRNVREALQAWADTATVI 333 (489)
T ss_dssp CHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTC-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cchhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhcccC-cccceeecchHHHHhhhHHHHHHHhhhhhhhh
Confidence 4444555554433221 12246778888888877654332 24567778888888888888888887776544
No 276
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=60.03 E-value=14 Score=26.19 Aligned_cols=34 Identities=9% Similarity=0.276 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQN 241 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~ 241 (322)
.+.....+|.-|...|+|+.|+.+|+.+++...+
T Consensus 11 ~i~e~~k~ARe~Al~GnYdta~~yY~g~~~qI~k 44 (78)
T 2rpa_A 11 MIVENVKLAREYALLGNYDSAMVYYQGVLDQMNK 44 (78)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 4556678899999999999999999999986654
No 277
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=59.13 E-value=21 Score=26.04 Aligned_cols=69 Identities=7% Similarity=-0.071 Sum_probs=47.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCC
Q 020735 214 KTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGE 284 (322)
Q Consensus 214 ~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d 284 (322)
..|..+++.|+|=+|-+.++..-.-.+..........+....|......|+. |...+.+++......++
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~~L~~~~~ 74 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEARLEGLPC 74 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHHHHHhCCC
Confidence 4577888899999999988887665432111122344455556666678888 99999999987766554
No 278
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=58.26 E-value=16 Score=26.19 Aligned_cols=31 Identities=10% Similarity=0.169 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 020735 248 EKKAARGLGASLQRQGKYREAIKYHSMVLQI 278 (322)
Q Consensus 248 ~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l 278 (322)
.+..+...+.-.-..|+|++|+.+|..+++.
T Consensus 15 ~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 15 AAATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4445666676677788888888888888766
No 279
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=56.67 E-value=26 Score=25.43 Aligned_cols=37 Identities=8% Similarity=0.206 Sum_probs=28.5
Q ss_pred CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 020735 204 PKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 240 (322)
Q Consensus 204 ~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~ 240 (322)
+....+..+...|...-..|+|++|+.+|..+++..-
T Consensus 10 ~~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~ 46 (93)
T 1wfd_A 10 SDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLL 46 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 3344666777788888888999999999888888654
No 280
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=56.26 E-value=23 Score=32.73 Aligned_cols=66 Identities=24% Similarity=0.172 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHhC-CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHH
Q 020735 227 KAFTEFKAALELAQNV-KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGA 294 (322)
Q Consensus 227 ~Al~~~~kAl~l~~~~-~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~ 294 (322)
.++..|.+|+..++.. ++.. .+-|..+|-.+++.+++.+|+.++-.+-......+......+.|-.
T Consensus 275 ~~l~L~~~AI~sa~~yY~n~H--vYPYtylgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKE 341 (472)
T 3re2_A 275 PAEELFKEAITVAKREYSDHH--IYPYTYLGGYYYRKKKYYEAIASWVDAGYVAGKYNYSKDDEEMYKE 341 (472)
T ss_dssp CHHHHHHHHHHHHHHHSTTCC--SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccCC--ccchhhhhhhhhhcchHHHHHHHHHHHHHHHHHcCCCccHHHHHHH
Confidence 3788888888887753 3332 3346678889999999999999999988887776655554455444
No 281
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=54.98 E-value=22 Score=25.84 Aligned_cols=31 Identities=13% Similarity=0.192 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 020735 248 EKKAARGLGASLQRQGKYREAIKYHSMVLQI 278 (322)
Q Consensus 248 ~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l 278 (322)
.+..+...+.-.-..|+|++|+.+|..+++.
T Consensus 14 ~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 14 AAVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 3444566666677777777777777777655
No 282
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=54.68 E-value=25 Score=33.16 Aligned_cols=66 Identities=15% Similarity=0.132 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHhC-CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHH
Q 020735 227 KAFTEFKAALELAQNV-KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGA 294 (322)
Q Consensus 227 ~Al~~~~kAl~l~~~~-~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~ 294 (322)
.++..|.+|+..++.. .+. ..+-|..+|-.+++.+++.+|+.++-.+-......+......+.|-.
T Consensus 297 ~~~~L~~~AI~sa~~~Y~n~--HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKE 363 (550)
T 3u84_A 297 DPLTLYHKGIASAKTYYRDE--HIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKE 363 (550)
T ss_dssp CHHHHHHHHHHHHHHHSTTC--CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccC--CccceeecchhhhhcchHHHHHHHHHHHHHHHHHcCCCcchHHHHHH
Confidence 3677888888877752 233 23346678889999999999999999998887776655555555544
No 283
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=53.84 E-value=33 Score=24.26 Aligned_cols=35 Identities=11% Similarity=0.195 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 020735 206 KEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 240 (322)
Q Consensus 206 ~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~ 240 (322)
...+..+...|.-.-..|+|++|+.+|..+++..-
T Consensus 10 l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~ 44 (85)
T 2v6x_A 10 LTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLM 44 (85)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 34566666677777777888888888888877543
No 284
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=52.16 E-value=27 Score=24.74 Aligned_cols=33 Identities=15% Similarity=0.058 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 020735 246 IEEKKAARGLGASLQRQGKYREAIKYHSMVLQI 278 (322)
Q Consensus 246 ~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l 278 (322)
...+..+...+.-.-..|+|++|+.+|..+++.
T Consensus 10 l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 10 LTKGIELVQKAIDLDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 344555666666666778888888888887655
No 285
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.83 E-value=37 Score=25.91 Aligned_cols=17 Identities=24% Similarity=0.282 Sum_probs=9.9
Q ss_pred CHHHHHHHHHHHHHHHH
Q 020735 224 DLEKAFTEFKAALELAQ 240 (322)
Q Consensus 224 ~~~~Al~~~~kAl~l~~ 240 (322)
.|++|..+..++|++.+
T Consensus 18 ~h~~AF~~Is~AL~~DE 34 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDE 34 (116)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhh
Confidence 34566666666666544
No 286
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=50.67 E-value=36 Score=25.94 Aligned_cols=35 Identities=9% Similarity=0.101 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 020735 206 KEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQ 240 (322)
Q Consensus 206 ~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~ 240 (322)
...+..+...|...-..++|++|+.+|..++++.-
T Consensus 15 l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~ 49 (117)
T 2cpt_A 15 LQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFL 49 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 44566667777777778888888888888888654
No 287
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=50.10 E-value=67 Score=26.70 Aligned_cols=61 Identities=11% Similarity=0.084 Sum_probs=43.1
Q ss_pred CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCH
Q 020735 204 PKKEELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKY 265 (322)
Q Consensus 204 ~~~~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~ 265 (322)
+..+.+.-.+.+|..+..+++|.+|.+.+..|+..++... ......++..|--+-...|+.
T Consensus 9 ~~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~-~~~k~~IL~yLIp~~Ll~G~i 69 (203)
T 3t5x_A 9 STAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSS-QKNKRMILIYLLPVKMLLGHM 69 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTC-HHHHHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhH-HHHHHHHHHHHHHHHHHcCCC
Confidence 3445677788999999999999999999999999877533 222333444554445555663
No 288
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=49.40 E-value=25 Score=26.86 Aligned_cols=32 Identities=19% Similarity=0.281 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 020735 247 EEKKAARGLGASLQRQGKYREAIKYHSMVLQI 278 (322)
Q Consensus 247 ~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l 278 (322)
..+..+...+.-.-..|+|++|+.+|..++++
T Consensus 16 ~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 16 QKAIDLASKAAQEDKAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 34445666677677788888888888888766
No 289
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=48.89 E-value=40 Score=27.70 Aligned_cols=47 Identities=11% Similarity=0.114 Sum_probs=36.9
Q ss_pred HHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 020735 259 LQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYI 316 (322)
Q Consensus 259 ~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl 316 (322)
....|+++.|.+..++. + ....|..||......|+++-|.+.|+++-
T Consensus 15 AL~lg~l~~A~e~a~~l-------~----~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 15 ALEYGNLDAALDEAKKL-------N----DSITWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp HHHTTCHHHHHHHHHHH-------C----CHHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred HHhcCCHHHHHHHHHHh-------C----CHHHHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 45678998888876542 1 24578999999999999999999998763
No 290
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=47.64 E-value=78 Score=23.02 Aligned_cols=50 Identities=24% Similarity=0.267 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHH
Q 020735 207 EELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASL 259 (322)
Q Consensus 207 ~~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~ 259 (322)
..+.+.+.-|.-+++.++|.+|..+|+++..+.+. .+....+-+.++.+-
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten---~~i~ki~~fyl~ec~ 100 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLSDN---EEIKKIASFYLEECR 100 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHccccC---HHHHHHHHHHHHHHH
Confidence 46778888899999999999999999998875432 333222225555543
No 291
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=46.66 E-value=1.2e+02 Score=28.72 Aligned_cols=70 Identities=11% Similarity=-0.044 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH-HHH
Q 020735 211 SRLKTGKNFLRNQDLEKAFTEFKAALELAQN-----VKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQI-SER 281 (322)
Q Consensus 211 ~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~-----~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l-~~~ 281 (322)
....+=.+|++.++..-+...++..-. ... .-.....+.-+|.+|..+...++|.+|.+++.+|+.. +..
T Consensus 178 l~n~L~kiYFkl~~~~lckni~k~i~~-~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~ 253 (455)
T 3t5v_B 178 LVNKLNNIYFRIESPQLCSNIFKNFQP-KSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNL 253 (455)
T ss_dssp HHHHHHHHHHHSSCCTTHHHHHHTHHH-HCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhcc-CCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCc
Confidence 334566889999999999888754333 211 1123346677899999999999999999999999988 663
No 292
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=46.52 E-value=87 Score=26.76 Aligned_cols=58 Identities=7% Similarity=-0.074 Sum_probs=34.3
Q ss_pred cCCHHHHHHHHHHHHHHHHHc--CCCc-hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Q 020735 262 QGKYREAIKYHSMVLQISERE--GEYS-GSTEAYGAIADCYTELGDLERAARFYDKYISRL 319 (322)
Q Consensus 262 ~gd~~eAi~~~~kaL~l~~~~--~d~~-~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~ 319 (322)
.|+-+.|...|++|.++++.. +.+| ....+++.--..|.-++++++|....++|++++
T Consensus 138 ~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~ 198 (227)
T 2o8p_A 138 LCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKIL 198 (227)
T ss_dssp SSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 455667777777777776642 1122 233344444445566777777777777776654
No 293
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=45.83 E-value=34 Score=24.92 Aligned_cols=65 Identities=23% Similarity=0.053 Sum_probs=42.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 254 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 254 ~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
.-|..++..|+|=+|-+.++..-.-............+....|......|+. |...+.+++..++
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~~L~ 70 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEARLE 70 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHT
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHHHHH
Confidence 3466788889999999999987655311000111223334445556677887 9999999998764
No 294
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=45.48 E-value=1.7e+02 Score=26.17 Aligned_cols=91 Identities=10% Similarity=0.073 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHcCCHHHHHHHHHH------------HHHHHHHc-CCCchHHHHHHH
Q 020735 229 FTEFKAALELAQNVKD-PIEEKKAARGLGASLQRQGKYREAIKYHSM------------VLQISERE-GEYSGSTEAYGA 294 (322)
Q Consensus 229 l~~~~kAl~l~~~~~d-~~~~~~a~~~LG~~~~~~gd~~eAi~~~~k------------aL~l~~~~-~d~~~~a~a~~~ 294 (322)
.++.++++....+.++ +...+..+..+|..|++.+++.+|..+|-- ..+..++. .+.+.....+..
T Consensus 113 ~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~ 192 (312)
T 2wpv_A 113 KDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFS 192 (312)
T ss_dssp HHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHHHH
Confidence 4566777777766544 334566788899999999999999987741 12233222 133444444444
Q ss_pred HH-HHHHHcCCHHHHHHHHHHHHHhh
Q 020735 295 IA-DCYTELGDLERAARFYDKYISRL 319 (322)
Q Consensus 295 Lg-~~y~~~gd~e~A~~~~~kAl~i~ 319 (322)
.| ..|...|+...|...++...+..
T Consensus 193 RaVL~yL~l~n~~~A~~~~~~f~~~~ 218 (312)
T 2wpv_A 193 RLVFNYLFISNISFAHESKDIFLERF 218 (312)
T ss_dssp HHHHHHHHTTBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 44 35678999999999988876654
No 295
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=44.59 E-value=37 Score=31.96 Aligned_cols=67 Identities=15% Similarity=0.135 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHhC-CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHH
Q 020735 227 KAFTEFKAALELAQNV-KDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAI 295 (322)
Q Consensus 227 ~Al~~~~kAl~l~~~~-~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~L 295 (322)
.+++.|++|+..++.. .+. ...-|..+|-.+++.++|.+|+.++-.+-......+......+.|-.+
T Consensus 282 ~~~~Lf~~AI~~ar~~Y~~~--hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~ 349 (489)
T 4gq4_A 282 DPLTLYHKGIASAKTYYRDE--HIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEF 349 (489)
T ss_dssp CHHHHHHHHHHHHHHHSTTC--CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccC--cccceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHH
Confidence 4567888888888753 222 234577788899999999999999999888777765444444444443
No 296
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=43.74 E-value=1.5e+02 Score=27.18 Aligned_cols=72 Identities=11% Similarity=0.015 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChH--HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 020735 208 ELLSRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKDPI--EEKKAARGLGASLQRQGKYREAIKYHSMVLQIS 279 (322)
Q Consensus 208 ~a~~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d~~--~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~ 279 (322)
.......++..|...++.++|..+.+++-......++.. .....+...+..|...++|.++..+.-..+...
T Consensus 126 ~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~~ 199 (393)
T 4b4t_O 126 ILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLSTL 199 (393)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhc
Confidence 456677789999999999999999999988877776543 455556666777788899888777766666543
No 297
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=42.78 E-value=1.8e+02 Score=27.17 Aligned_cols=91 Identities=12% Similarity=0.160 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-------C--CC---------------------------hH-HHHHHHH
Q 020735 211 SRLKTGKNFLRNQDLEKAFTEFKAALELAQN-------V--KD---------------------------PI-EEKKAAR 253 (322)
Q Consensus 211 ~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~-------~--~d---------------------------~~-~~~~a~~ 253 (322)
-+..++..+...++|.+|...+..+..+.-+ . +. +. .....+.
T Consensus 13 wl~~La~~h~~~~n~~EAa~cl~~~aaliae~L~~~~~~~~~~~~f~~i~p~~~ee~~~~~d~g~~~~~fte~~l~~ll~ 92 (428)
T 2wm9_A 13 WLDSMARIHVKNGDLSEAAMCYVHVTALVAEYLTRKGVFRQGCTAFRVITPNIDEEASMMEDVGMQDVHFNEDVLMELLE 92 (428)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHTTSSSCCGGGGTTTCGGGGGGC---------CCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhcCCCccchhccccccCCCccccCHHHHHHHHH
Confidence 4457899999999999998877533321111 0 00 00 0111233
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Q 020735 254 GLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTE 301 (322)
Q Consensus 254 ~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~ 301 (322)
.....+.+.+.|+.|+..++..+...+...|....+.++..++..|..
T Consensus 93 ~ai~~f~kg~~~E~ai~~~k~L~~~ye~~~dy~~Ls~~~~~~a~~y~~ 140 (428)
T 2wm9_A 93 QCADGLWKAERYELIADIYKLIIPIYEKRRDFERLAHLYDTLHRAYSK 140 (428)
T ss_dssp HHHHHHHHTTCGGGHHHHHTTTHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 334444455666777777777777777665544455555555555543
No 298
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.70 E-value=34 Score=26.10 Aligned_cols=16 Identities=31% Similarity=0.576 Sum_probs=8.0
Q ss_pred CCHHHHHHHHHHHHHh
Q 020735 303 GDLERAARFYDKYISR 318 (322)
Q Consensus 303 gd~e~A~~~~~kAl~i 318 (322)
|+.++|+++|++.+.-
T Consensus 36 g~k~~Al~lYk~GI~e 51 (116)
T 2dl1_A 36 GQKEEAKNYYKQGIGH 51 (116)
T ss_dssp TCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 5555555555555443
No 299
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=42.30 E-value=95 Score=29.41 Aligned_cols=67 Identities=12% Similarity=0.021 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH---cCCCc--hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020735 251 AARGLGASLQRQGKYREAIKYHSMVLQISER---EGEYS--GSTEAYGAIADCYTELGDLERAARFYDKYISR 318 (322)
Q Consensus 251 a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~---~~d~~--~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i 318 (322)
...+|-.+|++.++..-+...++. ++-..- .+..+ ..+.-+|.+|..+...++|.+|.+++..|++.
T Consensus 178 l~n~L~kiYFkl~~~~lckni~k~-i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~ 249 (455)
T 3t5v_B 178 LVNKLNNIYFRIESPQLCSNIFKN-FQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQS 249 (455)
T ss_dssp HHHHHHHHHHHSSCCTTHHHHHHT-HHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHH-hccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHh
Confidence 345666889999999988887744 333211 11111 35567889999999999999999999999987
No 300
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=41.37 E-value=35 Score=27.59 Aligned_cols=68 Identities=13% Similarity=0.046 Sum_probs=46.8
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHH---HHHHHHHHHcCCHHHHHHHHHHHHHhhh
Q 020735 253 RGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAY---GAIADCYTELGDLERAARFYDKYISRLE 320 (322)
Q Consensus 253 ~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~---~~Lg~~y~~~gd~e~A~~~~~kAl~i~e 320 (322)
+.-|..+++.|+|=+|-+.++..-.-....++.......+ ...|..+...|+..-|...+.+++..++
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~L~ 106 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQYFR 106 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 4567778888999999999998765422110011222333 3455666778999999999999998764
No 301
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=39.77 E-value=2.4e+02 Score=26.36 Aligned_cols=91 Identities=14% Similarity=0.042 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCC----------------hHHHHHH-HHHHHHHHHHcCCHHHHHHHHH
Q 020735 211 SRLKTGKNFLRNQDLEKAFTEFKAALELAQNVKD----------------PIEEKKA-ARGLGASLQRQGKYREAIKYHS 273 (322)
Q Consensus 211 ~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~~~d----------------~~~~~~a-~~~LG~~~~~~gd~~eAi~~~~ 273 (322)
-...++..+...++|.+|.-.+.-..++..-..+ ....... +......+.+-+.|+.|+..|+
T Consensus 37 ~l~~L~~~h~~~~ny~EAa~~l~lhA~l~~w~~~~~~~~~~~~~~~~~qt~~~~ke~L~~~~i~~f~kg~~~E~ai~l~k 116 (436)
T 2yin_A 37 YLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTHRQLKETLYETIIGYFDKGKMWEEAISLCK 116 (436)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSCCC--------------CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHCcCHHHHHHHHHHHHHHhCCCccccCcccccCCCCccccHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 4456899999999999998876332222111000 0111222 3333444446677888888888
Q ss_pred HHHHHHHHc-CCCchHHHHHHHHHHHHHH
Q 020735 274 MVLQISERE-GEYSGSTEAYGAIADCYTE 301 (322)
Q Consensus 274 kaL~l~~~~-~d~~~~a~a~~~Lg~~y~~ 301 (322)
..+...+.. -|....+.++..++.+|..
T Consensus 117 ~L~~~yE~~~~Dy~~Ls~~~~~~a~~y~~ 145 (436)
T 2yin_A 117 ELAEQYEMEIFDYELLSQNLIQQAKFYES 145 (436)
T ss_dssp HHHHHHHHTSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888887774 5655566666666666654
No 302
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=38.09 E-value=50 Score=31.18 Aligned_cols=33 Identities=18% Similarity=0.175 Sum_probs=27.1
Q ss_pred CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020735 285 YSGSTEAYGAIADCYTELGDLERAARFYDKYIS 317 (322)
Q Consensus 285 ~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~ 317 (322)
......++..+|.+|.-.++|++|+.+.++++.
T Consensus 187 r~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 187 KPNTDVVNGLMARAYLLTGQWGEAAKAAEAARK 219 (460)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred ccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 345667888889999999999999999888874
No 303
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=36.89 E-value=60 Score=30.90 Aligned_cols=33 Identities=15% Similarity=0.221 Sum_probs=27.3
Q ss_pred CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020735 285 YSGSTEAYGAIADCYTELGDLERAARFYDKYIS 317 (322)
Q Consensus 285 ~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~ 317 (322)
......++..+|.+|.-.++|++|+.+.++++.
T Consensus 199 r~tk~aA~allArvyL~~~~~~~A~~~a~~vi~ 231 (495)
T 3lew_A 199 KIDNEVVLGILSRACLYARQWEKAKTYSDKLLA 231 (495)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 345667788889999999999999999988875
No 304
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=36.80 E-value=90 Score=25.89 Aligned_cols=33 Identities=12% Similarity=0.173 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 020735 248 EKKAARGLGASLQRQGKYREAIKYHSMVLQISE 280 (322)
Q Consensus 248 ~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~ 280 (322)
.+.-.|.+|..+...++|.+|.+++.+|+..+.
T Consensus 13 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~ 45 (203)
T 3t5x_A 13 RVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCH 45 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCC
Confidence 556688999999999999999999999998754
No 305
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=35.07 E-value=51 Score=22.93 Aligned_cols=31 Identities=19% Similarity=0.419 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Q 020735 211 SRLKTGKNFLRNQDLEKAFTEFKAALELAQN 241 (322)
Q Consensus 211 ~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~ 241 (322)
....+|..+...|++++|+.+|-+|+..++.
T Consensus 19 ~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 19 EEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 3456788888888888888888888887765
No 306
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=34.12 E-value=1.5e+02 Score=31.47 Aligned_cols=68 Identities=6% Similarity=-0.015 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020735 248 EKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDLERAARFYDKYIS 317 (322)
Q Consensus 248 ~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~ 317 (322)
....|..|=..|.+.|+.++|.+.|.+..+...+ +-.| ....|+.|=..|.+.|+.++|.+.|++..+
T Consensus 126 ~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~k-G~~P-dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~ 193 (1134)
T 3spa_A 126 QQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQK-RKLL-TLDMYNAVMLGWARQGAFKELVYVLFMVKD 193 (1134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHH-HTTC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhc-CCCC-CHhHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 4456778888999999999999999775433221 1122 356799999999999999999999998754
No 307
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=33.77 E-value=1.2e+02 Score=24.29 Aligned_cols=33 Identities=21% Similarity=0.159 Sum_probs=24.6
Q ss_pred CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020735 285 YSGSTEAYGAIADCYTELGDLERAARFYDKYIS 317 (322)
Q Consensus 285 ~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~ 317 (322)
.+..+..++.+|.+|.+.|+..+|.+...+|-+
T Consensus 121 ~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 121 NEVSASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 444467777888888888888888888777654
No 308
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=33.60 E-value=1.9e+02 Score=26.39 Aligned_cols=115 Identities=10% Similarity=0.007 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHcCC------HHHHHHHHHHHHHH----------HHhCCChHHHHHHHHHHHHHHHHcCCHHHHH-
Q 020735 207 EELLSRLKTGKNFLRNQD------LEKAFTEFKAALEL----------AQNVKDPIEEKKAARGLGASLQRQGKYREAI- 269 (322)
Q Consensus 207 ~~a~~~~~la~~y~~~g~------~~~Al~~~~kAl~l----------~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi- 269 (322)
+.+.+++++|.+|...+. ...|..+|++|-.+ .+...-......++..+.....+.=-+.+|+
T Consensus 121 E~a~vLfNlaal~s~~A~~~~r~~lk~A~~~fq~AAG~f~~l~~~~~~~~~~Dls~~~l~~L~~l~LAQAQE~~~~Kai~ 200 (392)
T 1zb1_A 121 EKSCTLFNIAVIFTQIARENINEDYKNSIANLTKAFSCFEYLSENFLNSPSVDLQSENTRFLANICHAEAQELFVLKLLN 200 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSSSHHHHHHHHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q ss_pred -------------------HHHHHHHHHHHHcCCC------------------chHHHHHHHHHHHHHHcCCHHHHHHHH
Q 020735 270 -------------------KYHSMVLQISEREGEY------------------SGSTEAYGAIADCYTELGDLERAARFY 312 (322)
Q Consensus 270 -------------------~~~~kaL~l~~~~~d~------------------~~~a~a~~~Lg~~y~~~gd~e~A~~~~ 312 (322)
++|++|.+.....+.. ...+.+++..|....+.+++-+|+.++
T Consensus 201 ~~~~~~k~~liAkLa~~~~~~Y~~a~~~l~~~~~~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L 280 (392)
T 1zb1_A 201 DQISSKQYTLISKLSRATCNLFQKCHDFMKEIDDDVAIYGEPKWKTTVTCKLHFYKSLSAYYHGLHLEEENRVGEAIAFL 280 (392)
T ss_dssp STTGGGCHHHHHHHHHHHHHHHHHHHHHHHSCCCTTTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHH
T ss_pred ccccCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHH
Q ss_pred HHHHHhhhc
Q 020735 313 DKYISRLES 321 (322)
Q Consensus 313 ~kAl~i~e~ 321 (322)
+.|.+.+++
T Consensus 281 ~~A~~~l~~ 289 (392)
T 1zb1_A 281 DFSMQQLIS 289 (392)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
No 309
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=32.98 E-value=69 Score=30.01 Aligned_cols=33 Identities=21% Similarity=0.162 Sum_probs=26.5
Q ss_pred CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020735 285 YSGSTEAYGAIADCYTELGDLERAARFYDKYIS 317 (322)
Q Consensus 285 ~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~ 317 (322)
......++..+|.+|.-.|+|++|+.+.++++.
T Consensus 186 r~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 186 RMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred eecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 445566788888888888999999888888875
No 310
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=32.91 E-value=2.3e+02 Score=24.15 Aligned_cols=53 Identities=13% Similarity=0.010 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHc--CCCchHHHHHHHH-HHHHHHcCCHHHHHHHHHHHHH
Q 020735 265 YREAIKYHSMVLQISERE--GEYSGSTEAYGAI-ADCYTELGDLERAARFYDKYIS 317 (322)
Q Consensus 265 ~~eAi~~~~kaL~l~~~~--~d~~~~a~a~~~L-g~~y~~~gd~e~A~~~~~kAl~ 317 (322)
-+.|...|++|.++++.. +.+|..-....|. ...|.-+++.++|....++|.+
T Consensus 146 ~e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 146 AENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 456889999999998752 3344333333344 4445558999999887777664
No 311
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=32.65 E-value=82 Score=23.06 Aligned_cols=31 Identities=19% Similarity=0.419 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Q 020735 211 SRLKTGKNFLRNQDLEKAFTEFKAALELAQN 241 (322)
Q Consensus 211 ~~~~la~~y~~~g~~~~Al~~~~kAl~l~~~ 241 (322)
....+|..+...|+++.|+.+|-+|+..++.
T Consensus 22 ~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 22 EEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 4456899999999999999999999998876
No 312
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=32.50 E-value=1.4e+02 Score=21.62 Aligned_cols=49 Identities=16% Similarity=0.281 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHH-HHHHHHHH
Q 020735 248 EKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAY-GAIADCYT 300 (322)
Q Consensus 248 ~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~-~~Lg~~y~ 300 (322)
.+..+..-|.-+++.++|.+|...|+++..+.+ ++..-..+ +.++.|-.
T Consensus 52 ~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~te----n~~i~ki~~fyl~ec~k 101 (106)
T 2vkj_A 52 KARSLIAEGKDLFETANYGEALVFFEKALNLSD----NEEIKKIASFYLEECRK 101 (106)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHcccc----CHHHHHHHHHHHHHHHH
Confidence 344555666778899999999999999887633 45444444 66776654
No 313
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=32.01 E-value=2.5e+02 Score=24.37 Aligned_cols=53 Identities=13% Similarity=0.016 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHc--CCCchHHHHHHHHH-HHHHHcCCHHHHHHHHHHHHH
Q 020735 265 YREAIKYHSMVLQISERE--GEYSGSTEAYGAIA-DCYTELGDLERAARFYDKYIS 317 (322)
Q Consensus 265 ~~eAi~~~~kaL~l~~~~--~d~~~~a~a~~~Lg-~~y~~~gd~e~A~~~~~kAl~ 317 (322)
-+.|...|++|.+++... +.+|-.-....|.+ ..|.-++++++|....++|.+
T Consensus 172 ~e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 172 AENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 456889999999988653 22333333334444 445558999998887766654
No 314
>2r17_C Vacuolar protein sorting-associated protein 35; protein transport, membrane, phosphorylation; 2.80A {Homo sapiens}
Probab=31.73 E-value=2.7e+02 Score=24.65 Aligned_cols=110 Identities=11% Similarity=0.016 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHh-CCChHHHHHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHHHHcCC
Q 020735 211 SRLKTGKNFLRNQD---LEKAFTEFKAALELAQN-VKDPIEEKKAARGLGASLQRQGKY--REAIKYHSMVLQISEREGE 284 (322)
Q Consensus 211 ~~~~la~~y~~~g~---~~~Al~~~~kAl~l~~~-~~d~~~~~~a~~~LG~~~~~~gd~--~eAi~~~~kaL~l~~~~~d 284 (322)
.++.-|.+--..+- -+-|-++|.+|+.++++ +.|+.....+...+...+.+..-+ +.-...-.++-..+.+.-.
T Consensus 101 L~Lq~A~~ad~~~~~~~e~iaYEFf~qAf~iYEe~IsdSk~Q~~al~~ii~tL~~~~~f~~enye~L~tk~t~~askLLK 180 (298)
T 2r17_C 101 LFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKLLK 180 (298)
T ss_dssp HHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHccCCCHhhHHHHHHHHHHHHHhccC
Confidence 33444444444444 56778899999999987 888888888877776666665553 2233333455445555666
Q ss_pred CchHHHHHHHHHHHHHH----------cCCHHHHHHHHHHHHHhhh
Q 020735 285 YSGSTEAYGAIADCYTE----------LGDLERAARFYDKYISRLE 320 (322)
Q Consensus 285 ~~~~a~a~~~Lg~~y~~----------~gd~e~A~~~~~kAl~i~e 320 (322)
.++...+.+.-+..+.. ..|.++..+.+++++++++
T Consensus 181 K~dQcraV~~cshLfW~~~~~~~~~~~~rd~krVleCLqkaLkiA~ 226 (298)
T 2r17_C 181 KPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIAN 226 (298)
T ss_dssp HHHHHHHHHHTHHHHHTCBCTTTTTCBCCCHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCCCccccchhhccchHHHHHHHHHHHHHHH
Confidence 78888888888888874 2588899999999999875
No 315
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=31.34 E-value=55 Score=22.72 Aligned_cols=24 Identities=25% Similarity=0.457 Sum_probs=11.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHH
Q 020735 254 GLGASLQRQGKYREAIKYHSMVLQ 277 (322)
Q Consensus 254 ~LG~~~~~~gd~~eAi~~~~kaL~ 277 (322)
.+|..+...|++++|+.+|-+|+.
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~ 45 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIA 45 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHH
Confidence 445555555555555555544443
No 316
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=31.07 E-value=70 Score=30.03 Aligned_cols=33 Identities=15% Similarity=0.156 Sum_probs=24.2
Q ss_pred CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020735 285 YSGSTEAYGAIADCYTELGDLERAARFYDKYIS 317 (322)
Q Consensus 285 ~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~ 317 (322)
......++..+|.+|.-.|+|++|+.+.++++.
T Consensus 192 r~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 192 KVNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp SCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred eeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 344556777778888888888888888777765
No 317
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=28.69 E-value=67 Score=23.53 Aligned_cols=28 Identities=21% Similarity=0.392 Sum_probs=23.8
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 020735 253 RGLGASLQRQGKYREAIKYHSMVLQISE 280 (322)
Q Consensus 253 ~~LG~~~~~~gd~~eAi~~~~kaL~l~~ 280 (322)
..+|..+...|+++.|+.+|-+|+..+.
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~ 51 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCG 51 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 4678888889999999999999988855
No 318
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=28.50 E-value=75 Score=31.37 Aligned_cols=94 Identities=16% Similarity=-0.003 Sum_probs=61.4
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--------HHHHcCCCc---
Q 020735 218 NFLRNQDLEKAFTEFKAALELAQNVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQ--------ISEREGEYS--- 286 (322)
Q Consensus 218 ~y~~~g~~~~Al~~~~kAl~l~~~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~--------l~~~~~d~~--- 286 (322)
.....++++.|..+|...-.-.. ......|.+|.++...|+.++|..+|+++.+ -.++.+...
T Consensus 294 ~Alr~~d~~~a~~~~~~l~~~~~------~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~~~~fYg~lAa~~Lg~~~~~~ 367 (618)
T 1qsa_A 294 MALGTGDRRGLNTWLARLPMEAK------EKDEWRYWQADLLLERGREAEAKEILHQLMQQRGFYPMVAAQRIGEEYELK 367 (618)
T ss_dssp HHHHHTCHHHHHHHHHHSCTTGG------GSHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSHHHHHHHHHTTCCCCCC
T ss_pred HHHHCCCHHHHHHHHHHcccccc------ccHhHHHHHHHHHHHcCCHHHHHHHHHHHhcCCChHHHHHHHHcCCCCCCC
Confidence 34466999999998865433211 2567789999999999999999999998754 111222110
Q ss_pred ---------h--HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020735 287 ---------G--STEAYGAIADCYTELGDLERAARFYDKYIS 317 (322)
Q Consensus 287 ---------~--~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~ 317 (322)
. ........+..+...|....|...+...++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~r~~~L~~~g~~~~a~~ew~~~~~ 409 (618)
T 1qsa_A 368 IDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVK 409 (618)
T ss_dssp CCCCCSCCCCHHHHSHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred CCCCChhHHhhhccChHHHHHHHHHHCCChhhHHHHHHHHHh
Confidence 0 111233456667788888888777666543
No 319
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=27.52 E-value=3e+02 Score=23.72 Aligned_cols=53 Identities=15% Similarity=-0.033 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHHc--CCCch-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020735 265 YREAIKYHSMVLQISERE--GEYSG-STEAYGAIADCYTELGDLERAARFYDKYIS 317 (322)
Q Consensus 265 ~~eAi~~~~kaL~l~~~~--~d~~~-~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~ 317 (322)
-+.|...|++|.+++... +.+|- ...+++.--..|.-++++++|....++|.+
T Consensus 147 ~~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 467889999999988753 22333 333344334455668999998887766654
No 320
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=27.22 E-value=43 Score=24.30 Aligned_cols=17 Identities=35% Similarity=0.540 Sum_probs=8.6
Q ss_pred CHHHHHHHHHHHHHHHH
Q 020735 264 KYREAIKYHSMVLQISE 280 (322)
Q Consensus 264 d~~eAi~~~~kaL~l~~ 280 (322)
.|++|..+..++|.+-+
T Consensus 12 ~h~~AF~~Is~aL~~DE 28 (89)
T 3eab_A 12 FHKQAFEYISIALRIDE 28 (89)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 34555555555555533
No 321
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=26.87 E-value=1.4e+02 Score=24.02 Aligned_cols=80 Identities=16% Similarity=0.113 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHH---hCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCH
Q 020735 229 FTEFKAALELAQ---NVKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDL 305 (322)
Q Consensus 229 l~~~~kAl~l~~---~~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~ 305 (322)
...+++++.... ...+.......+...+.. .++ +.+.|.... ..+--...+..|...|..+...|++
T Consensus 43 ~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~---~~~---p~~if~~L~----~~~IG~~~AlfY~~wA~~lE~~~~~ 112 (164)
T 2wvi_A 43 STLLERAVEALQGEKRYYSDPRFLNLWLKLGRL---CNE---PLDMYSYLH----NQGIGVSLAQFYISWAEEYEARENF 112 (164)
T ss_dssp HHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHHH---CSC---HHHHHHHHH----HTTSSTTBHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHhhhhhhhccCHHHHHHHHHHHHh---cCC---HHHHHHHHH----HCCcchhhHHHHHHHHHHHHHcCCH
Confidence 345666665443 233444444444444433 244 334443322 1222334677788889999999999
Q ss_pred HHHHHHHHHHHHh
Q 020735 306 ERAARFYDKYISR 318 (322)
Q Consensus 306 e~A~~~~~kAl~i 318 (322)
.+|.+.|+.+++.
T Consensus 113 ~~A~~Iy~~Gi~~ 125 (164)
T 2wvi_A 113 RKADAIFQEGIQQ 125 (164)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 9999999999864
No 322
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=26.33 E-value=1.3e+02 Score=23.86 Aligned_cols=80 Identities=13% Similarity=0.104 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHh---CCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCH
Q 020735 229 FTEFKAALELAQN---VKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDL 305 (322)
Q Consensus 229 l~~~~kAl~l~~~---~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~ 305 (322)
...+++++....+ ..+.......+...+.. ..+ +.+.|.-... .+--...+..|...|..+...|++
T Consensus 48 ~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~---~~d---p~~if~~L~~----~~IG~~~AlfYe~wA~~lE~~g~~ 117 (152)
T 4a1g_A 48 ITLLEHLMKEFLDKKKYHNDPRFISYCLKFAEY---NSD---LHQFFEFLYN----HGIGTLSSPLYIAWAGHLEAQGEL 117 (152)
T ss_dssp HHHHHHHHHHHTTCGGGTTCHHHHHHHHHHHTT---BSC---HHHHHHHHHT----TTTTTTBHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHhcccccccCCHHHHHHHHHHHHh---cCC---HHHHHHHHHH----CCCcHHHHHHHHHHHHHHHHcCCH
Confidence 3456666665533 23333444444433322 122 5555544321 122334677788899999999999
Q ss_pred HHHHHHHHHHHHh
Q 020735 306 ERAARFYDKYISR 318 (322)
Q Consensus 306 e~A~~~~~kAl~i 318 (322)
++|.+.|+.+++.
T Consensus 118 ~~A~~Vy~~Gi~~ 130 (152)
T 4a1g_A 118 QHASAVLQRGIQN 130 (152)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 9999999999874
No 323
>1h7d_A Aminolevulinic acid synthase 2, erythroid; acyltransferase, ALAS, presequence, structure; NMR {Mus musculus} SCOP: j.88.1.1 PDB: 1h7j_A
Probab=26.12 E-value=24 Score=22.65 Aligned_cols=15 Identities=27% Similarity=0.541 Sum_probs=13.0
Q ss_pred CceeeeccccccCCC
Q 020735 1 MAVMLRCSSILTRPS 15 (322)
Q Consensus 1 ~~~~~~~~~~~~~~~ 15 (322)
||.++|+|-|++|-+
T Consensus 4 ma~~l~~CPFL~R~p 18 (49)
T 1h7d_A 4 AAMLLRSCPVLSQGP 18 (49)
T ss_dssp SSCSCCSCCCCSSCS
T ss_pred HhhhhccCCchhcCC
Confidence 789999999999854
No 324
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=25.96 E-value=1.1e+02 Score=28.78 Aligned_cols=34 Identities=18% Similarity=0.212 Sum_probs=27.9
Q ss_pred CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 020735 285 YSGSTEAYGAIADCYTELGDLERAARFYDKYISR 318 (322)
Q Consensus 285 ~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~i 318 (322)
......++..+|.+|.-.|+|++|+.+.++++.-
T Consensus 193 r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 193 LFNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 4446678888899999999999999999988853
No 325
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=25.82 E-value=3.3e+02 Score=23.63 Aligned_cols=53 Identities=11% Similarity=0.019 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHHc--CCCchHHHHHHHHH-HHHHHcCCHHHHHHHHHHHHH
Q 020735 265 YREAIKYHSMVLQISERE--GEYSGSTEAYGAIA-DCYTELGDLERAARFYDKYIS 317 (322)
Q Consensus 265 ~~eAi~~~~kaL~l~~~~--~d~~~~a~a~~~Lg-~~y~~~gd~e~A~~~~~kAl~ 317 (322)
-+.|...|++|.++++.. +.+|..-....|.+ ..|.-+++.++|....++|.+
T Consensus 151 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 151 AESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 356888999999998752 33443333334444 445558999999887776654
No 326
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=25.19 E-value=79 Score=29.78 Aligned_cols=33 Identities=18% Similarity=0.278 Sum_probs=26.0
Q ss_pred CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020735 285 YSGSTEAYGAIADCYTELGDLERAARFYDKYIS 317 (322)
Q Consensus 285 ~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~ 317 (322)
......++..+|.+|.-.|+|++|+.+.++++.
T Consensus 198 r~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 230 (477)
T 3mcx_A 198 YINYWAAQALLSRVYLNMGEYQKAYDAATDVIK 230 (477)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 445566777888888888888888888888875
No 327
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=24.07 E-value=3.4e+02 Score=23.18 Aligned_cols=53 Identities=15% Similarity=-0.009 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHHc--CCCch-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020735 265 YREAIKYHSMVLQISERE--GEYSG-STEAYGAIADCYTELGDLERAARFYDKYIS 317 (322)
Q Consensus 265 ~~eAi~~~~kaL~l~~~~--~d~~~-~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~ 317 (322)
-+.|...|++|.++++.. +.+|- ...+++.--..|.-++++++|....++|.+
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 467888999999988753 22333 333444334455677999998887666653
No 328
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=23.70 E-value=1.2e+02 Score=28.96 Aligned_cols=31 Identities=10% Similarity=-0.049 Sum_probs=19.2
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020735 287 GSTEAYGAIADCYTELGDLERAARFYDKYIS 317 (322)
Q Consensus 287 ~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~ 317 (322)
....|+..+|.+|.-.++|++|+.+.+++++
T Consensus 180 tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 210 (517)
T 3qnk_A 180 TKGAAYALKSRVELYDKRYEDVIKSCAEVYK 210 (517)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566666666666666666666666653
No 329
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=23.45 E-value=2.4e+02 Score=25.67 Aligned_cols=33 Identities=21% Similarity=0.085 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 020735 248 EKKAARGLGASLQRQGKYREAIKYHSMVLQISE 280 (322)
Q Consensus 248 ~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~ 280 (322)
.+.+++..|......+++.+|+..++.|.+..+
T Consensus 252 ~A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~l~ 284 (376)
T 3r9m_A 252 TAYAYCYHGETLLASDKCGEAIRSLQEAEKLYA 284 (376)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence 356778888888888999999999988877654
No 330
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=23.44 E-value=1.7e+02 Score=24.91 Aligned_cols=80 Identities=15% Similarity=0.091 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHh---CCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCH
Q 020735 229 FTEFKAALELAQN---VKDPIEEKKAARGLGASLQRQGKYREAIKYHSMVLQISEREGEYSGSTEAYGAIADCYTELGDL 305 (322)
Q Consensus 229 l~~~~kAl~l~~~---~~d~~~~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~~~~d~~~~a~a~~~Lg~~y~~~gd~ 305 (322)
...+++++....+ ..+.......+...+.. . +++.+.|.-... .+--...+..|...|..+...|++
T Consensus 97 ~~lLErc~~~F~~~~rYknD~RyLklWl~Ya~~---~---~~p~~if~~L~~----~~IG~~~AlfYe~wA~~lE~~g~~ 166 (223)
T 4aez_C 97 VTLLERCTREFVRNPLYKDDVRYLRIWMQYVNY---I---DEPVELFSFLAH----HHIGQESSIFYEEYANYFESRGLF 166 (223)
T ss_dssp HHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHTT---C---SCHHHHHHHHHH----TTCSTTBHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHhcccccccCCHHHHHHHHHHHHc---c---CCHHHHHHHHHH----CCcchhHHHHHHHHHHHHHHcCCH
Confidence 3456666655433 23334444444443331 2 244445544321 122334677788899999999999
Q ss_pred HHHHHHHHHHHHh
Q 020735 306 ERAARFYDKYISR 318 (322)
Q Consensus 306 e~A~~~~~kAl~i 318 (322)
++|.+.|+.+++.
T Consensus 167 ~~A~~Vy~~Gi~~ 179 (223)
T 4aez_C 167 QKADEVYQKGKRM 179 (223)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc
Confidence 9999999999874
No 331
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=21.20 E-value=1.6e+02 Score=28.22 Aligned_cols=33 Identities=9% Similarity=0.105 Sum_probs=24.2
Q ss_pred CchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 020735 285 YSGSTEAYGAIADCYTELGDLERAARFYDKYIS 317 (322)
Q Consensus 285 ~~~~a~a~~~Lg~~y~~~gd~e~A~~~~~kAl~ 317 (322)
......|+-.+|.+|.-.++|++|+++.++++.
T Consensus 194 r~tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 226 (528)
T 3i4g_A 194 RACKQAALAFLGRTCMLQKDWKSGAKAFHDIME 226 (528)
T ss_dssp SCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 344556777778888888888888888877765
No 332
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=20.41 E-value=1.4e+02 Score=28.23 Aligned_cols=31 Identities=13% Similarity=0.114 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 020735 248 EKKAARGLGASLQRQGKYREAIKYHSMVLQI 278 (322)
Q Consensus 248 ~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l 278 (322)
...++..++.+|...++|++|+++.+++|..
T Consensus 202 k~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 202 NEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 4457778999999999999999999999864
No 333
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=20.40 E-value=1.5e+02 Score=27.53 Aligned_cols=33 Identities=12% Similarity=0.095 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 020735 248 EKKAARGLGASLQRQGKYREAIKYHSMVLQISE 280 (322)
Q Consensus 248 ~~~a~~~LG~~~~~~gd~~eAi~~~~kaL~l~~ 280 (322)
...++..++.+|...++|++|+++.+++|....
T Consensus 189 k~aa~allarvyL~~~~~~~A~~~a~~vi~~~~ 221 (454)
T 3myv_A 189 KYAARALLARIYLYHDDNRKAFDLADQLIKDAD 221 (454)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHhCCC
Confidence 445677899999999999999999999997543
No 334
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=20.34 E-value=88 Score=30.03 Aligned_cols=40 Identities=15% Similarity=0.029 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHcC--CCchHHHHHHHHHHHHHHcCCH
Q 020735 266 REAIKYHSMVLQISEREG--EYSGSTEAYGAIADCYTELGDL 305 (322)
Q Consensus 266 ~eAi~~~~kaL~l~~~~~--d~~~~a~a~~~Lg~~y~~~gd~ 305 (322)
++|+++|++|++..++.. +++....-+.+++..|.-.|||
T Consensus 449 ~kAi~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak~yE~aGDy 490 (526)
T 2wb7_A 449 QGAIDEYKAAINDLQKAAQQDDYQMFLNYLNAAKKHEMAGDY 490 (526)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHhhhhhhccHH
Done!