Your job contains 1 sequence.
>020737
MAPATTSSAEARRLIGSRRRTEAPRRMLSPSPPPKKVKSMEEILAKAHYAVVERGDYGDV
GCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRKI
IDFFKIKKPNLTEEKCDSPQDTRKRRRRSASLVLQKKRRRLLPFTPSEDRSQRLSQMGSL
AHALTALQMEFSDDLTYMPGMAPRSANQAEFEEGGMQVLSKEDTETLEQCRAMCKRGECP
PLVVVYDSCEGFTVEADGQIKDMTFIAEYIGDVDFIRNREHDDCDSMMTLLLATDPSKSL
VICPDKRGNIARFINGINNYTP
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020737
(322 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2144841 - symbol:ATXR5 "AT5G09790" species:370... 1030 5.3e-104 1
TAIR|locus:2169779 - symbol:ATXR6 "AT5G24330" species:370... 824 3.6e-82 1
ZFIN|ZDB-GENE-041010-202 - symbol:baz2a "bromodomain adja... 193 4.0e-12 1
ZFIN|ZDB-GENE-030131-624 - symbol:phrf1 "PHD and ring fin... 172 1.5e-09 1
UNIPROTKB|F1NRS9 - symbol:BAZ2B "Bromodomain adjacent to ... 169 3.9e-09 1
UNIPROTKB|F1P2F7 - symbol:BAZ2B "Bromodomain adjacent to ... 169 4.2e-09 1
UNIPROTKB|E1C3I8 - symbol:BAZ2B "Bromodomain adjacent to ... 169 4.2e-09 1
UNIPROTKB|Q9DE13 - symbol:BAZ2B "Bromodomain adjacent to ... 169 4.2e-09 1
UNIPROTKB|H0YDG9 - symbol:RSF1 "Remodeling and spacing fa... 146 8.6e-09 2
UNIPROTKB|I3LU11 - symbol:PHRF1 "Uncharacterized protein"... 162 1.1e-08 2
UNIPROTKB|Q9UIF8 - symbol:BAZ2B "Bromodomain adjacent to ... 162 2.7e-08 1
UNIPROTKB|F1MG25 - symbol:BAZ2B "Uncharacterized protein"... 159 3.7e-08 1
MGI|MGI:1309478 - symbol:Baz1a "bromodomain adjacent to z... 147 3.8e-08 2
ZFIN|ZDB-GENE-010328-16 - symbol:baz1b "bromodomain adjac... 159 4.7e-08 1
MGI|MGI:2141847 - symbol:Phrf1 "PHD and ring finger domai... 160 5.1e-08 2
UNIPROTKB|P58267 - symbol:DPF1 "Zinc finger protein neuro... 150 5.3e-08 1
UNIPROTKB|E2RP59 - symbol:BAZ2B "Uncharacterized protein"... 158 7.1e-08 1
UNIPROTKB|E2RP61 - symbol:BAZ2B "Uncharacterized protein"... 158 7.5e-08 1
UNIPROTKB|F1NRC4 - symbol:KDM5B "Lysine-specific demethyl... 135 7.7e-08 2
UNIPROTKB|F1NUR9 - symbol:KDM5B "Lysine-specific demethyl... 135 7.8e-08 2
UNIPROTKB|Q5F3R2 - symbol:KDM5B "Lysine-specific demethyl... 135 7.9e-08 2
UNIPROTKB|A5PLL3 - symbol:MYST3 "MYST3 protein" species:9... 152 1.1e-07 1
UNIPROTKB|F1SE29 - symbol:KAT6A "Uncharacterized protein"... 155 1.1e-07 1
RGD|1311245 - symbol:Rsf1 "remodeling and spacing factor ... 148 1.3e-07 3
RGD|708360 - symbol:Phrf1 "PHD and ring finger domains 1"... 160 1.7e-07 2
UNIPROTKB|Q63625 - symbol:Phrf1 "PHD and RING finger doma... 160 1.7e-07 2
MGI|MGI:2151152 - symbol:Baz2a "bromodomain adjacent to z... 154 1.8e-07 1
MGI|MGI:2136980 - symbol:Kdm5a "lysine (K)-specific demet... 136 2.5e-07 2
UNIPROTKB|J9P712 - symbol:PHRF1 "Uncharacterized protein"... 160 2.5e-07 2
UNIPROTKB|F1PXY6 - symbol:PHRF1 "Uncharacterized protein"... 160 2.5e-07 2
UNIPROTKB|E9PJ24 - symbol:PHRF1 "PHD and RING finger doma... 160 2.6e-07 2
UNIPROTKB|F8WEF5 - symbol:PHRF1 "PHD and RING finger doma... 160 2.6e-07 2
UNIPROTKB|Q9P1Y6 - symbol:PHRF1 "PHD and RING finger doma... 160 2.6e-07 2
UNIPROTKB|F1MCP3 - symbol:BAZ2B "Uncharacterized protein"... 153 2.7e-07 1
UNIPROTKB|E1BNJ5 - symbol:BAZ2B "Uncharacterized protein"... 153 2.7e-07 1
UNIPROTKB|H0YCN2 - symbol:RSF1 "Remodeling and spacing fa... 148 3.0e-07 1
RGD|1304892 - symbol:Kat6a "K(lysine) acetyltransferase 6... 152 3.2e-07 1
MGI|MGI:2442415 - symbol:Kat6a "K(lysine) acetyltransfera... 152 3.2e-07 1
UNIPROTKB|Q92794 - symbol:KAT6A "Histone acetyltransferas... 152 3.2e-07 1
UNIPROTKB|E2R922 - symbol:KAT6A "Uncharacterized protein"... 152 3.3e-07 1
UNIPROTKB|F1P0N4 - symbol:DPF3 "Zinc finger protein DPF3"... 143 3.4e-07 1
UNIPROTKB|A8DZJ1 - symbol:baz1b "Tyrosine-protein kinase ... 150 3.7e-07 1
UNIPROTKB|F1NFV8 - symbol:BAZ1A "Uncharacterized protein"... 150 4.0e-07 1
UNIPROTKB|F1P0N5 - symbol:DPF3 "Zinc finger protein DPF3"... 143 4.0e-07 1
UNIPROTKB|F1P8R2 - symbol:RSF1 "Uncharacterized protein" ... 148 4.0e-07 3
UNIPROTKB|P58270 - symbol:DPF3 "Zinc finger protein DPF3"... 143 4.2e-07 1
FB|FBgn0037344 - symbol:CG2926 species:7227 "Drosophila m... 141 4.6e-07 3
ZFIN|ZDB-GENE-041014-190 - symbol:dpf3 "D4, zinc and doub... 142 4.6e-07 1
UNIPROTKB|F1MLK1 - symbol:RSF1 "Uncharacterized protein" ... 148 4.7e-07 2
UNIPROTKB|E9PSM3 - symbol:Jarid1a "Protein Jarid1a" speci... 136 5.0e-07 2
ZFIN|ZDB-GENE-091204-206 - symbol:si:dkey-21n12.3 "si:dke... 146 5.1e-07 2
UNIPROTKB|I3LNG0 - symbol:I3LNG0 "Uncharacterized protein... 139 6.3e-07 1
UNIPROTKB|E1BN25 - symbol:BAZ1A "Uncharacterized protein"... 147 8.0e-07 1
UNIPROTKB|F1STY8 - symbol:RSF1 "Uncharacterized protein" ... 148 8.2e-07 3
UNIPROTKB|Q96T23 - symbol:RSF1 "Remodeling and spacing fa... 148 8.2e-07 3
RGD|1306199 - symbol:Baz1a "bromodomain adjacent to zinc ... 147 8.6e-07 1
UNIPROTKB|E2RE69 - symbol:BAZ1A "Uncharacterized protein"... 147 8.6e-07 1
UNIPROTKB|Q9NRL2 - symbol:BAZ1A "Bromodomain adjacent to ... 147 8.8e-07 1
UNIPROTKB|J9P748 - symbol:BAZ1A "Uncharacterized protein"... 147 8.8e-07 1
UNIPROTKB|F1SHI5 - symbol:BAZ1A "Uncharacterized protein"... 147 8.8e-07 1
RGD|1309052 - symbol:Dpf3 "D4, zinc and double PHD finger... 139 9.1e-07 1
UNIPROTKB|F1N0V2 - symbol:DPF3 "Uncharacterized protein" ... 139 9.5e-07 1
UNIPROTKB|Q92784 - symbol:DPF3 "Zinc finger protein DPF3"... 139 9.5e-07 1
MGI|MGI:1917377 - symbol:Dpf3 "D4, zinc and double PHD fi... 139 9.5e-07 1
RGD|1565602 - symbol:Kdm5b "lysine (K)-specific demethyla... 140 9.7e-07 2
UNIPROTKB|F5H1F7 - symbol:KDM5A "Lysine-specific demethyl... 135 9.8e-07 2
UNIPROTKB|F1Q4J4 - symbol:KDM5A "Uncharacterized protein"... 135 1.0e-06 2
UNIPROTKB|P29375 - symbol:KDM5A "Lysine-specific demethyl... 135 1.0e-06 2
UNIPROTKB|F1MWC1 - symbol:DPF1 "Uncharacterized protein" ... 138 1.3e-06 1
MGI|MGI:1352748 - symbol:Dpf1 "D4, zinc and double PHD fi... 138 1.3e-06 1
UNIPROTKB|F1MED1 - symbol:DPF1 "Uncharacterized protein" ... 138 1.3e-06 1
UNIPROTKB|J3KQY6 - symbol:DPF1 "Zinc finger protein neuro... 138 1.3e-06 1
UNIPROTKB|F1MQ59 - symbol:KDM5A "Uncharacterized protein"... 135 1.3e-06 2
UNIPROTKB|E1BS85 - symbol:E1BS85 "Uncharacterized protein... 142 1.5e-06 1
UNIPROTKB|I3L6G5 - symbol:DPF1 "Uncharacterized protein" ... 138 1.5e-06 1
ASPGD|ASPL0000010243 - symbol:AN8211 species:162425 "Emer... 145 1.7e-06 1
MGI|MGI:109529 - symbol:Dpf2 "D4, zinc and double PHD fin... 137 1.7e-06 1
RGD|1311699 - symbol:Dpf2 "D4, zinc and double PHD finger... 137 1.7e-06 1
UNIPROTKB|I3LN35 - symbol:BAZ2B "Uncharacterized protein"... 145 1.9e-06 1
UNIPROTKB|F1RPS1 - symbol:BAZ2B "Uncharacterized protein"... 145 1.9e-06 1
FB|FBgn0033015 - symbol:d4 "d4" species:7227 "Drosophila ... 138 2.0e-06 1
UNIPROTKB|A6QQS0 - symbol:DPF2 "D4, zinc and double PHD f... 136 2.2e-06 1
UNIPROTKB|E2R3L8 - symbol:DPF2 "Uncharacterized protein" ... 136 2.2e-06 1
UNIPROTKB|Q92785 - symbol:DPF2 "Zinc finger protein ubi-d... 136 2.2e-06 1
UNIPROTKB|F1PXH9 - symbol:DPF2 "Uncharacterized protein" ... 136 2.4e-06 1
UNIPROTKB|J3KMZ8 - symbol:DPF2 "Zinc finger protein ubi-d... 136 2.4e-06 1
UNIPROTKB|F1RRH9 - symbol:DPF2 "Uncharacterized protein" ... 136 2.4e-06 1
UNIPROTKB|F1P989 - symbol:BAZ2A "Uncharacterized protein"... 144 2.4e-06 1
UNIPROTKB|J9NSC0 - symbol:BAZ2A "Uncharacterized protein"... 144 2.4e-06 1
UNIPROTKB|B7ZS37 - symbol:baz2a "Bromodomain adjacent to ... 143 2.7e-06 1
UNIPROTKB|P58268 - symbol:REQ "Zinc finger protein ubi-d4... 135 3.1e-06 1
MGI|MGI:1922855 - symbol:Kdm5b "lysine (K)-specific demet... 139 3.2e-06 2
UNIPROTKB|E1BEB3 - symbol:KAT6A "Uncharacterized protein"... 152 3.2e-06 2
UNIPROTKB|B3KV94 - symbol:JARID1B "cDNA FLJ16281 fis, clo... 139 3.4e-06 2
UNIPROTKB|C9JGA3 - symbol:KDM5D "Lysine-specific demethyl... 135 3.4e-06 1
UNIPROTKB|F1MFX5 - symbol:F1MFX5 "Uncharacterized protein... 142 3.6e-06 1
UNIPROTKB|H0YEK2 - symbol:PHF21A "PHD finger protein 21A"... 113 3.7e-06 1
MGI|MGI:1858746 - symbol:Kat6b "K(lysine) acetyltransfera... 142 3.9e-06 1
ZFIN|ZDB-GENE-030131-5132 - symbol:dpf2l "D4, zinc and do... 134 4.0e-06 1
MGI|MGI:99781 - symbol:Kdm5c "lysine (K)-specific demethy... 140 4.0e-06 2
WARNING: Descriptions of 132 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2144841 [details] [associations]
symbol:ATXR5 "AT5G09790" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009555 "pollen
development" evidence=IMP] [GO:0051726 "regulation of cell cycle"
evidence=IEP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0046976 "histone methyltransferase activity
(H3-K27 specific)" evidence=IDA] [GO:0070734 "histone H3-K27
methylation" evidence=IDA] [GO:0006275 "regulation of DNA
replication" evidence=IGI] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 SMART:SM00249 SMART:SM00317 GO:GO:0005634
EMBL:CP002688 GO:GO:0009507 GO:GO:0006275 GO:GO:0009555
GO:GO:0046872 GO:GO:0008270 GO:GO:0051726 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0009294 GO:GO:0046976
IPI:IPI00775647 RefSeq:NP_001078559.1 UniGene:At.27076
ProteinModelPortal:F4KFB9 SMR:F4KFB9 PRIDE:F4KFB9
EnsemblPlants:AT5G09790.2 GeneID:830839 KEGG:ath:AT5G09790
OMA:TFIAEYT ArrayExpress:F4KFB9 Uniprot:F4KFB9
Length = 379
Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
Identities = 202/323 (62%), Positives = 249/323 (77%)
Query: 7 SSAEARRLIGSRRRTEAP-RRMLXXXXXXXXXXXMEEILAKAHYAVVERGD------YGD 59
+S+ A SRRRT+AP RR M EI+AK+ VVE+ + Y +
Sbjct: 6 ASSPAASPCSSRRRTKAPARRPSSESPPPRKMKSMAEIMAKS-VPVVEQEEEEDEDSYSN 64
Query: 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
V CE+CGSGE +ELLLCDKCD+GFHMKCLRPIVVRVPIGTWLC CS QR VR SQ+K
Sbjct: 65 VTCEKCGSGEGDDELLLCDKCDRGFHMKCLRPIVVRVPIGTWLCVDCSDQRPVRRLSQKK 124
Query: 120 IIDFFKIKKPNLTEEKCDSPQDTRKRRRRSASLVLQKKRRRLLPFTPSEDRSQRLSQMGS 179
I+ FF+I+K +K + Q+ ++RRRS SL ++K+RR+LLP PSED QRL+QMG+
Sbjct: 125 ILHFFRIEKHTHQTDKLELSQEETRKRRRSCSLTVKKRRRKLLPLVPSEDPDQRLAQMGT 184
Query: 180 LAHALTALQMEFSDDLTYMPGMAPRSANQAEFEEGGMQVLSKEDTETLEQCRAMCKRGEC 239
LA ALTAL +++SD L Y+PGMAPRSANQ++ E+GGMQVL KED ETLEQC++M +RGEC
Sbjct: 185 LASALTALGIKYSDGLNYVPGMAPRSANQSKLEKGGMQVLCKEDLETLEQCQSMYRRGEC 244
Query: 240 PPLVVVYDSCEGFTVEADGQIKDMTFIAEYIGDVDFIRNREHDDCDSMMTLLLATDPSKS 299
PPLVVV+D EG+TVEADG IKD+TFIAEY GDVD+++NRE DDCDS+MTLLL+ DPSK+
Sbjct: 245 PPLVVVFDPLEGYTVEADGPIKDLTFIAEYTGDVDYLKNREKDDCDSIMTLLLSEDPSKT 304
Query: 300 LVICPDKRGNIARFINGINNYTP 322
LVICPDK GNI+RFINGINN+ P
Sbjct: 305 LVICPDKFGNISRFINGINNHNP 327
>TAIR|locus:2169779 [details] [associations]
symbol:ATXR6 "AT5G24330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009901 "anther dehiscence" evidence=IMP] [GO:0051726
"regulation of cell cycle" evidence=IEP] [GO:0046976 "histone
methyltransferase activity (H3-K27 specific)" evidence=IDA]
[GO:0070734 "histone H3-K27 methylation" evidence=IDA] [GO:0006275
"regulation of DNA replication" evidence=IGI;RCA] [GO:0000280
"nuclear division" evidence=RCA] [GO:0000911 "cytokinesis by cell
plate formation" evidence=RCA] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] [GO:0010389 "regulation of G2/M
transition of mitotic cell cycle" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051225 "spindle assembly"
evidence=RCA] Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
SMART:SM00249 SMART:SM00317 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006275 GO:GO:0046872 EMBL:AB016884
GO:GO:0008270 EMBL:AB006701 GO:GO:0051726 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0009901
InterPro:IPR019786 PROSITE:PS01359 EMBL:BT012223 EMBL:BT012421
IPI:IPI00543408 RefSeq:NP_197821.1 UniGene:At.30965
ProteinModelPortal:Q9FNE9 SMR:Q9FNE9 DIP:DIP-48530N STRING:Q9FNE9
PRIDE:Q9FNE9 EnsemblPlants:AT5G24330.1 GeneID:832503
KEGG:ath:AT5G24330 TAIR:At5g24330 eggNOG:NOG305320
HOGENOM:HOG000238747 InParanoid:Q9FNE9 OMA:VICPDRR PhylomeDB:Q9FNE9
ProtClustDB:CLSN2686326 Genevestigator:Q9FNE9 GermOnline:AT5G24330
GO:GO:0046976 Uniprot:Q9FNE9
Length = 349
Score = 824 (295.1 bits), Expect = 3.6e-82, P = 3.6e-82
Identities = 161/267 (60%), Positives = 199/267 (74%)
Query: 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFS-- 116
D CE+C SG++ +LLLCDKCDKGFH+ CLRPI+V VP G+W CP CS + +SF
Sbjct: 32 DTVCEECSSGKQPAKLLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCSKHQIPKSFPLI 91
Query: 117 QRKIIDFFKIKKPNLTEEKCDSPQDTRKRRRRSASLVLQKKRRRLLPFTPSEDRSQRLSQ 176
Q KIIDFF+IK+ + + S D+ ++R+ SLV+ KK+RRLLP+ PS D +RL Q
Sbjct: 92 QTKIIDFFRIKR-SPDSSQISSSSDSIGKKRKKTSLVMSKKKRRLLPYNPSNDPQRRLEQ 150
Query: 177 MGSLAHALTALQMEFSDDLTYMPGMAPRSANQAEFEEGGMQVLSKEDTETLEQCRAMCKR 236
M SLA AL A +FS++LTY+ G APRSANQA FE+GGMQVLSKE ETL C+ M
Sbjct: 151 MASLATALRASNTKFSNELTYVSGKAPRSANQAAFEKGGMQVLSKEGVETLALCKKMMDL 210
Query: 237 GECPPLVVVYDSCEGFTVEADGQIKDMTFIAEYIGDVDFIRNREHD-DCDSMMTLLLATD 295
GECPPL+VV+D EGFTVEAD IKD T I EY+GDVD++ NRE D D DSMMTLL A+D
Sbjct: 211 GECPPLMVVFDPYEGFTVEADRFIKDWTIITEYVGDVDYLSNREDDYDGDSMMTLLHASD 270
Query: 296 PSKSLVICPDKRGNIARFINGINNYTP 322
PS+ LVICPD+R NIARFI+GINN++P
Sbjct: 271 PSQCLVICPDRRSNIARFISGINNHSP 297
>ZFIN|ZDB-GENE-041010-202 [details] [associations]
symbol:baz2a "bromodomain adjacent to zinc finger
domain, 2A" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01429
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982
SMART:SM00249 SMART:SM00297 SMART:SM00384 SMART:SM00391
ZFIN:ZDB-GENE-041010-202 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018501 Pfam:PF02791 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:CR450824
IPI:IPI00928777 Ensembl:ENSDART00000081773 ArrayExpress:F1QRW7
Bgee:F1QRW7 Uniprot:F1QRW7
Length = 1305
Score = 193 (73.0 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 56/198 (28%), Positives = 86/198 (43%)
Query: 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRS-FSQR 118
V C+ C G+ E LLLCD CD+G HM CLRP V++VP G W CP C ++ S SQR
Sbjct: 1079 VTCQVCRKGDDDEYLLLCDGCDRGCHMFCLRPKVLQVPDGDWFCPNCVAKKTGESPRSQR 1138
Query: 119 KIIDFFKIKKPNLTEEKCDSPQDTRKRRR-RSASLVLQKKRRRLLPFTPSEDRSQRLSQM 177
K++K L E+ D + R+ R +PS+ R
Sbjct: 1139 SSRQRSKVRKRRLGEDSSDEEEGFRRSMTTRQKETPAPSSSSSSTSISPSKRRRMTTRNQ 1198
Query: 178 GSLAHA-LTALQME-FSDDLTYMPGMAPRSA-NQAEFEEGGMQVLSKEDTETLEQCRAMC 234
L + + ++ME SD ++ + PR + M L+ + L+ C
Sbjct: 1199 PDLTYCEIILMEMEAHSDAWPFLEPVNPRMVPGYRRIIKNPMDFLTMRE-RLLQGGYCSC 1257
Query: 235 KRGECPPLVVVYDSCEGF 252
+ +V +++CE F
Sbjct: 1258 EEFAADAQLV-FNNCELF 1274
>ZFIN|ZDB-GENE-030131-624 [details] [associations]
symbol:phrf1 "PHD and ring finger domains 1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518
ZFIN:ZDB-GENE-030131-624 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 GeneTree:ENSGT00530000063661 EMBL:AL928892
Ensembl:ENSDART00000150719 Bgee:H0WEE0 Uniprot:H0WEE0
Length = 1670
Score = 172 (65.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 43/151 (28%), Positives = 66/151 (43%)
Query: 56 DYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSF 115
D CE CG +R + LLLCD CD G+HM+CL P + VP+ W CP+C R
Sbjct: 179 DLDQTSCEICGGRDREDRLLLCDGCDAGYHMECLTPPLDAVPVEEWFCPECIANNRTSGS 238
Query: 116 SQRKIIDFFKIKKPNLTEEKCDSPQDTRKRRRRSASLVLQKKRRRLLPFTPSEDRSQR-L 174
Q I + P + + P R ++S + R R+ +E + R +
Sbjct: 239 EQ--ISEEESSSLPTTSHSR-SRPTRAIARTQQSERVRASVNRHRITQARTAEQLAPRYM 295
Query: 175 SQMGSLAHALTALQMEFSDDLTYMPGMAPRS 205
Q L + A+ + + Y+ + PRS
Sbjct: 296 MQSTWLDETINAVVAGLNTAV-YVRDLTPRS 325
>UNIPROTKB|F1NRS9 [details] [associations]
symbol:BAZ2B "Bromodomain adjacent to zinc finger domain
protein 2B" species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 SMART:SM00391 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 SUPFAM:SSF54171 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:AADN02017093
EMBL:AADN02017094 EMBL:AADN02017095 EMBL:AADN02017096
IPI:IPI00821034 Ensembl:ENSGALT00000037696 ArrayExpress:F1NRS9
Uniprot:F1NRS9
Length = 1981
Score = 169 (64.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 46/135 (34%), Positives = 62/135 (45%)
Query: 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
V C+ C G+ E LLLCD CDKG H C RP + +P G W CP C + ++ +K
Sbjct: 1747 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACIAKASGQTLKLKK 1806
Query: 120 IIDFFKIKKPNLTEEKCDSPQDTRKRRRRSASLVLQKKRRRLLPFTPSEDRSQRLSQMGS 179
+ K KK N + P DT + S L KR + P D S +SQ G
Sbjct: 1807 LQ--IKGKKSNEQKRGRKLPGDTEDEDSATTSTSL--KRGKTEPKKRKMDESVSVSQ-GK 1861
Query: 180 LAHALTALQMEFSDD 194
+ TA++ DD
Sbjct: 1862 QEN-FTAIKKPKRDD 1875
>UNIPROTKB|F1P2F7 [details] [associations]
symbol:BAZ2B "Bromodomain adjacent to zinc finger domain
protein 2B" species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 IPI:IPI00572336
EMBL:AADN02017093 EMBL:AADN02017094 EMBL:AADN02017095
EMBL:AADN02017096 Ensembl:ENSGALT00000020542 ArrayExpress:F1P2F7
Uniprot:F1P2F7
Length = 2125
Score = 169 (64.5 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 46/135 (34%), Positives = 62/135 (45%)
Query: 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
V C+ C G+ E LLLCD CDKG H C RP + +P G W CP C + ++ +K
Sbjct: 1891 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACIAKASGQTLKLKK 1950
Query: 120 IIDFFKIKKPNLTEEKCDSPQDTRKRRRRSASLVLQKKRRRLLPFTPSEDRSQRLSQMGS 179
+ K KK N + P DT + S L KR + P D S +SQ G
Sbjct: 1951 LQ--IKGKKSNEQKRGRKLPGDTEDEDSATTSTSL--KRGKTEPKKRKMDESVSVSQ-GK 2005
Query: 180 LAHALTALQMEFSDD 194
+ TA++ DD
Sbjct: 2006 QEN-FTAIKKPKRDD 2019
>UNIPROTKB|E1C3I8 [details] [associations]
symbol:BAZ2B "Bromodomain adjacent to zinc finger domain
protein 2B" species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 OMA:DSDDQAD
EMBL:AADN02017093 EMBL:AADN02017094 EMBL:AADN02017095
EMBL:AADN02017096 IPI:IPI00821728 Ensembl:ENSGALT00000037699
ArrayExpress:E1C3I8 Uniprot:E1C3I8
Length = 2126
Score = 169 (64.5 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 46/135 (34%), Positives = 62/135 (45%)
Query: 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
V C+ C G+ E LLLCD CDKG H C RP + +P G W CP C + ++ +K
Sbjct: 1892 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACIAKASGQTLKLKK 1951
Query: 120 IIDFFKIKKPNLTEEKCDSPQDTRKRRRRSASLVLQKKRRRLLPFTPSEDRSQRLSQMGS 179
+ K KK N + P DT + S L KR + P D S +SQ G
Sbjct: 1952 LQ--IKGKKSNEQKRGRKLPGDTEDEDSATTSTSL--KRGKTEPKKRKMDESVSVSQ-GK 2006
Query: 180 LAHALTALQMEFSDD 194
+ TA++ DD
Sbjct: 2007 QEN-FTAIKKPKRDD 2020
>UNIPROTKB|Q9DE13 [details] [associations]
symbol:BAZ2B "Bromodomain adjacent to zinc finger domain
protein 2B" species:9031 "Gallus gallus" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01429 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00297 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
Gene3D:3.30.890.10 EMBL:AF224275 IPI:IPI00572336 RefSeq:NP_990008.1
UniGene:Gga.9252 ProteinModelPortal:Q9DE13 SMR:Q9DE13 PRIDE:Q9DE13
GeneID:395400 KEGG:gga:395400 CTD:29994 HOGENOM:HOG000231981
HOVERGEN:HBG050670 NextBio:20815484 Uniprot:Q9DE13
Length = 2130
Score = 169 (64.5 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 46/135 (34%), Positives = 62/135 (45%)
Query: 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
V C+ C G+ E LLLCD CDKG H C RP + +P G W CP C + ++ +K
Sbjct: 1896 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACIAKASGQTLKLKK 1955
Query: 120 IIDFFKIKKPNLTEEKCDSPQDTRKRRRRSASLVLQKKRRRLLPFTPSEDRSQRLSQMGS 179
+ K KK N + P DT + S L KR + P D S +SQ G
Sbjct: 1956 LQ--IKGKKSNEQKRGRKLPGDTEDEDSATTSTSL--KRGKTEPKKRKMDESVSVSQ-GK 2010
Query: 180 LAHALTALQMEFSDD 194
+ TA++ DD
Sbjct: 2011 QEN-FTAIKKPKRDD 2024
>UNIPROTKB|H0YDG9 [details] [associations]
symbol:RSF1 "Remodeling and spacing factor 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:AP000580
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:AP000609
EMBL:AP002343 HGNC:HGNC:18118 ChiTaRS:RSF1 Ensembl:ENST00000531026
Bgee:H0YDG9 Uniprot:H0YDG9
Length = 276
Score = 146 (56.5 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C++CG E +LLCD CD G+H CLRP ++ +P G W CP C
Sbjct: 3 CKKCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPC 47
Score = 43 (20.2 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 137 DSPQDTRKRRRRSASLVLQKKRRRL 161
D + KR +R+A+ +KKRRRL
Sbjct: 177 DEERKENKRPQRAAA-ARRKKRRRL 200
>UNIPROTKB|I3LU11 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00109 SMART:SM00184 SMART:SM00249
Prosite:PS00518 GO:GO:0035556 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 OMA:YMKKLHM
GeneTree:ENSGT00530000063661 EMBL:FP015900
Ensembl:ENSSSCT00000024857 Uniprot:I3LU11
Length = 1643
Score = 162 (62.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107
CE CG +R + LLLCD CD G+HM+CL P + VP+ W CP+C+
Sbjct: 185 CEVCGRSDREDRLLLCDGCDAGYHMECLEPPLQEVPVDEWFCPECT 230
Score = 48 (22.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 107 SGQRRVRSFSQRKIIDFFKIKKPNLTEEKCDSPQDT-RKRRRRSASLVLQKKRRR 160
SG R RS S D K +P + S + + +R +R + ++RRR
Sbjct: 1014 SGDRSSRSVSPAGAEDQAKRHRPKARSRRSSSDRSSSHERAKRKKAKAKSRERRR 1068
Score = 44 (20.5 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 25/85 (29%), Positives = 33/85 (38%)
Query: 165 TPSEDRSQRLSQMGSLAHALTALQMEFSDDLTYMPGMAPRSANQAEFE----EGGMQVLS 220
T SEDR Q L G AL A + T +P + +A + + G +Q LS
Sbjct: 566 TQSEDRPQSLGATGPGRAALGAAPAPPTP--TCVPALTSGAAVKLDSSVTPRSGQVQTLS 623
Query: 221 KEDTETLEQCRAMCKRGEC---PPL 242
+L Q GE PPL
Sbjct: 624 SASRPSLRQDDGPQMNGEVRHSPPL 648
Score = 39 (18.8 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 140 QDTRKRRRRSASLVLQKKRRR 160
++ RKRR RS SL + + R
Sbjct: 1149 RERRKRRSRSPSLEHRPREHR 1169
>UNIPROTKB|Q9UIF8 [details] [associations]
symbol:BAZ2B "Bromodomain adjacent to zinc finger domain
protein 2B" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0006351 "transcription,
DNA-dependent" evidence=NAS] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 SMART:SM00391 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
SUPFAM:SSF54171 EMBL:CH471058 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
Gene3D:3.30.890.10 CTD:29994 HOGENOM:HOG000231981
HOVERGEN:HBG050670 EMBL:AB032255 EMBL:AB040909 EMBL:AL080173
EMBL:AL834381 EMBL:BC012576 EMBL:AK027612 IPI:IPI00061354
IPI:IPI00220295 IPI:IPI00873703 IPI:IPI00916292 IPI:IPI00929198
PIR:T12495 RefSeq:NP_038478.2 UniGene:Hs.470369 PDB:2E7O PDB:3G0L
PDB:3Q2F PDBsum:2E7O PDBsum:3G0L PDBsum:3Q2F
ProteinModelPortal:Q9UIF8 SMR:Q9UIF8 IntAct:Q9UIF8
MINT:MINT-1483920 STRING:Q9UIF8 PhosphoSite:Q9UIF8 DMDM:229462995
PaxDb:Q9UIF8 PRIDE:Q9UIF8 Ensembl:ENST00000343439
Ensembl:ENST00000355831 Ensembl:ENST00000392782
Ensembl:ENST00000392783 GeneID:29994 KEGG:hsa:29994 UCSC:uc002uao.3
UCSC:uc002uap.3 GeneCards:GC02M160139 H-InvDB:HIX0002531
HGNC:HGNC:963 HPA:HPA019819 MIM:605683 neXtProt:NX_Q9UIF8
PharmGKB:PA25273 InParanoid:Q9UIF8 OMA:DSDDQAD OrthoDB:EOG4WH8JW
BindingDB:Q9UIF8 ChEMBL:CHEMBL1741220 ChiTaRS:BAZ2B
EvolutionaryTrace:Q9UIF8 GenomeRNAi:29994 NextBio:52792
ArrayExpress:Q9UIF8 Bgee:Q9UIF8 CleanEx:HS_BAZ2B
Genevestigator:Q9UIF8 GermOnline:ENSG00000123636 Uniprot:Q9UIF8
Length = 2168
Score = 162 (62.1 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 41/122 (33%), Positives = 58/122 (47%)
Query: 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
V C+ C G+ E LLLCD CDKG H C RP + +P G W CP C + ++ +K
Sbjct: 1932 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACIAKASGQTLKIKK 1991
Query: 120 IIDFFKIKKPNLTEE--KCDSPQDTRKRRRRSASLVLQKKRRRLLPFTPSEDRSQRLSQM 177
+ K KK N +++ K DT S S L++ + L E+ S LS+
Sbjct: 1992 L--HVKGKKTNESKKGKKVTLTGDTEDEDSASTSSSLKRGNKDLKKRKMEENTSINLSKQ 2049
Query: 178 GS 179
S
Sbjct: 2050 ES 2051
>UNIPROTKB|F1MG25 [details] [associations]
symbol:BAZ2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01429 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00297 SMART:SM00391
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:DAAA02004468
EMBL:DAAA02004469 EMBL:DAAA02004470 IPI:IPI00906306
Ensembl:ENSBTAT00000027534 Uniprot:F1MG25
Length = 1456
Score = 159 (61.0 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 66/225 (29%), Positives = 98/225 (43%)
Query: 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
V C+ C G+ E LLLCD CDKG H C RP + +P G W CP C + +Q+
Sbjct: 1221 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACIAKSLKSQITQKH 1280
Query: 120 II----DFFKIKKPNLTEEKCDSPQ--------DTRKRRRRSASLVLQKK----RRRLLP 163
+ KIKK ++ +K +S + DT S S L++ ++R +
Sbjct: 1281 QLKASGQTLKIKKLHVKGKKSESKKGKKVTLTGDTEDEDSASTSSSLKRGVKDLKKRKME 1340
Query: 164 FTPSEDRSQRLSQMGSLAHALTALQMEFSDDLTYMPGMAPRSANQAEFEEGGMQVLSKE- 222
P D S+ L+ + LT +ME +D P + P N + G +V+ K
Sbjct: 1341 -KPKRDDSKDLALCSMI---LT--EMETHEDA--WPFLLP--VN-LKLVPGYKKVIKKPM 1389
Query: 223 DTETLEQCRAMCKRGECPPLV-------VVYDSCEGFTVEADGQI 260
D T+ R G+ P L +V+D+CE F E D I
Sbjct: 1390 DFSTI---REKLSSGQYPNLETFALDVRLVFDNCETFN-EDDSDI 1430
>MGI|MGI:1309478 [details] [associations]
symbol:Baz1a "bromodomain adjacent to zinc finger domain 1A"
species:10090 "Mus musculus" [GO:0000228 "nuclear chromosome"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008623 "CHRAC" evidence=ISO] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00297 MGI:MGI:1309478 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0006261
GO:GO:0006338 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 InterPro:IPR018359 GO:GO:0000228
HOGENOM:HOG000095179 HOVERGEN:HBG080889 OMA:SSFQNNV
OrthoDB:EOG49GKFR GO:GO:0008623 InterPro:IPR004022
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537
PROSITE:PS50827 PROSITE:PS51136 EMBL:AC138767 EMBL:AC154732
EMBL:CT030142 EMBL:AK135668 EMBL:AK166955 EMBL:AF033664
IPI:IPI00896695 UniGene:Mm.479583 IntAct:O88379 STRING:O88379
PhosphoSite:O88379 PaxDb:O88379 PRIDE:O88379
Ensembl:ENSMUST00000038926 UCSC:uc007nnz.2
GeneTree:ENSGT00660000095335 InParanoid:O88379 Bgee:O88379
CleanEx:MM_BAZ1A Genevestigator:O88379
GermOnline:ENSMUSG00000035021 Uniprot:O88379
Length = 1555
Score = 147 (56.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
C+ C AE ++LCD CD+G H C+RP + VP G W CP+C ++R R S R+
Sbjct: 1152 CKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKAVPDGDWFCPECRPKQRSRRLSSRQ 1209
Score = 59 (25.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 138 SPQDTRKRRRRSASLVLQKKRRRLLPFTPSEDRSQRLSQMGSLAHALTALQMEFSDDLT 196
S Q T K +SAS L+K R P P+E RS R+ S H+ +ALQ F + L+
Sbjct: 1299 SQQSTPKNTAKSASKNLRKTRSA--P--PTETRSLRVGSR-STRHSPSALQDVFVELLS 1352
>ZFIN|ZDB-GENE-010328-16 [details] [associations]
symbol:baz1b "bromodomain adjacent to zinc finger
domain, 1B" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004715 "non-membrane spanning protein
tyrosine kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA;ISS] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA;ISS] [GO:0016572 "histone
phosphorylation" evidence=ISS] [GO:0035173 "histone kinase
activity" evidence=ISS] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 SMART:SM00297 ZFIN:ZDB-GENE-010328-16 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF10537 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 EMBL:BX950182
EMBL:CU326349 IPI:IPI00998609 Ensembl:ENSDART00000128582
Uniprot:E7EYG7
Length = 1802
Score = 159 (61.0 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 29/98 (29%), Positives = 54/98 (55%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRKII 121
C+ C ++L+LCD+C+K FH+ CLRP + R+P G WLCP C RS R
Sbjct: 1205 CKVCRRKGEDDKLILCDECNKAFHLFCLRPALYRIPAGEWLCPACQPTIARRSSRGRNYK 1264
Query: 122 DFFKIKKPNLTEEKCDSPQDTRKRRRRSASLVLQKKRR 159
+ + ++ + E++ +S ++ + R+ L+ +++
Sbjct: 1265 EDSEEEEDSEEEDEEESEEEDSEEEHRNTGHSLRSRKK 1302
>MGI|MGI:2141847 [details] [associations]
symbol:Phrf1 "PHD and ring finger domains 1" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070063 "RNA polymerase binding" evidence=ISO]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00109 SMART:SM00184 SMART:SM00249
MGI:MGI:2141847 Prosite:PS00518 GO:GO:0005634 GO:GO:0035556
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0006366
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 InterPro:IPR017907 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM ChiTaRS:PHRF1
GO:GO:0070063 EMBL:AC108908 EMBL:AC163434 EMBL:BC094566
EMBL:BC138446 EMBL:BC145719 EMBL:AK129387 IPI:IPI00881116
IPI:IPI00881246 RefSeq:NP_001074587.1 UniGene:Mm.248656
ProteinModelPortal:A6H619 SMR:A6H619 STRING:A6H619 PRIDE:A6H619
Ensembl:ENSMUST00000106027 Ensembl:ENSMUST00000122143 GeneID:101471
KEGG:mmu:101471 UCSC:uc009kkb.1 UCSC:uc009kkc.1
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 InParanoid:Q505G1
NextBio:354944 Bgee:A6H619 Genevestigator:A6H619 Uniprot:A6H619
Length = 1682
Score = 160 (61.4 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107
CE CG +R + LLLCD CD G+HM+CL P + VP+ W CP+C+
Sbjct: 188 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECT 233
Score = 44 (20.5 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 142 TRKRRRRSASLVLQKKRRRLLPFTPS-EDRSQRLSQMGSLAHA 183
+R+R + S+ ++RRR +PS E R +R AH+
Sbjct: 1148 SRERMDKQESVTRSRERRRWRSRSPSLEHRPRRPPSREKRAHS 1190
Score = 37 (18.1 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 119 KIIDFFKIKKPNLTEEKCDSPQDTRKRRRRSASLVLQKKRRRLLPFTPSEDRSQR 173
+I++F + T S + T+K++++ A + +R R + S DR+ R
Sbjct: 992 RIVEFRASSRSRSTSSS-RSRKKTKKKKKKVAR---EHQRTRSSTRSGSRDRTSR 1042
>UNIPROTKB|P58267 [details] [associations]
symbol:DPF1 "Zinc finger protein neuro-d4" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=ISS] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0005634 GO:GO:0005737 GO:GO:0007399 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0003676
Gene3D:3.30.160.60 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 EMBL:AF362752
IPI:IPI00597142 RefSeq:NP_989971.1 UniGene:Gga.47
ProteinModelPortal:P58267 GeneID:395352 KEGG:gga:395352 CTD:8193
HOVERGEN:HBG004475 NextBio:20815437 InterPro:IPR025750 Pfam:PF14051
Uniprot:P58267
Length = 380
Score = 150 (57.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 25/48 (52%), Positives = 29/48 (60%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
C CGS E E+LL CD CD+G+HM C+ P V P GTW C C Q
Sbjct: 321 CSLCGSAENDEQLLFCDDCDRGYHMYCISPPVAEPPEGTWSCHLCLRQ 368
>UNIPROTKB|E2RP59 [details] [associations]
symbol:BAZ2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 SMART:SM00391 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 SUPFAM:SSF54171 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:AAEX03017693
Ensembl:ENSCAFT00000015012 Uniprot:E2RP59
Length = 2073
Score = 158 (60.7 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 40/122 (32%), Positives = 58/122 (47%)
Query: 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
V C+ C G+ E LLLCD CDKG H C RP + +P G W CP C + ++ +K
Sbjct: 1837 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACIAKASGQTLKIKK 1896
Query: 120 IIDFFKIKKPNLTEE--KCDSPQDTRKRRRRSASLVLQKKRRRLLPFTPSEDRSQRLSQM 177
+ K KK N +++ K DT S + L++ + L E+ S LS+
Sbjct: 1897 LQ--VKGKKTNESKKGKKVTLTGDTEDEDSASTNSSLKRGNKDLKKRKMEENTSVNLSKQ 1954
Query: 178 GS 179
S
Sbjct: 1955 ES 1956
>UNIPROTKB|E2RP61 [details] [associations]
symbol:BAZ2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 SMART:SM00391 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 SUPFAM:SSF54171 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 CTD:29994
OMA:DSDDQAD EMBL:AAEX03017693 RefSeq:XP_856450.2
Ensembl:ENSCAFT00000015011 GeneID:478762 KEGG:cfa:478762
Uniprot:E2RP61
Length = 2169
Score = 158 (60.7 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 40/122 (32%), Positives = 58/122 (47%)
Query: 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
V C+ C G+ E LLLCD CDKG H C RP + +P G W CP C + ++ +K
Sbjct: 1933 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACIAKASGQTLKIKK 1992
Query: 120 IIDFFKIKKPNLTEE--KCDSPQDTRKRRRRSASLVLQKKRRRLLPFTPSEDRSQRLSQM 177
+ K KK N +++ K DT S + L++ + L E+ S LS+
Sbjct: 1993 LQ--VKGKKTNESKKGKKVTLTGDTEDEDSASTNSSLKRGNKDLKKRKMEENTSVNLSKQ 2050
Query: 178 GS 179
S
Sbjct: 2051 ES 2052
>UNIPROTKB|F1NRC4 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 IPI:IPI00578699 EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 Ensembl:ENSGALT00000000582
ArrayExpress:F1NRC4 Uniprot:F1NRC4
Length = 1510
Score = 135 (52.6 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 24/48 (50%), Positives = 28/48 (58%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
C CGSG + LLLCD CD +H CL P + VP G W CP+C Q
Sbjct: 275 CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLAQ 322
Score = 69 (29.3 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 151 SLVLQKKRRRLLPFTPS-EDRSQRLSQMGSLAHAL-----TALQMEFSDDLTYMPGMAPR 204
+L L++K+++L PS + RS +L + L AL TA M + A R
Sbjct: 1061 TLGLKRKQKKLKEPMPSGKKRSTKLESLSDLERALSESKDTASAMATLGEARLKEMEALR 1120
Query: 205 SANQAEFEEGGMQVLSKEDTETLEQCRAMCKRGECPPLVVVYDSCEGF 252
S A EG + + S+ED E L+ C +C++ P++ + C GF
Sbjct: 1121 SLRAAN--EGKV-LCSEEDAE-LKVC--VCQKEPAAPMIQC-ELCRGF 1161
Score = 49 (22.3 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 19/67 (28%), Positives = 27/67 (40%)
Query: 125 KIKKPNLTEEKCDSPQDTRKRRRRSASLVLQKKRR-RLLPFTPSEDRSQRLSQMGSLAHA 183
K KK L+ K D +R R R L Q+ L+P S + ++ A
Sbjct: 1397 KKKKLKLSHTK-DVSSSSRMERERERLLEAQRSSESHLVPSDTSFSEQEDSEDEDAICPA 1455
Query: 184 LTALQME 190
+T LQ E
Sbjct: 1456 VTCLQPE 1462
>UNIPROTKB|F1NUR9 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 IPI:IPI00823098
Ensembl:ENSGALT00000040834 ArrayExpress:F1NUR9 Uniprot:F1NUR9
Length = 1521
Score = 135 (52.6 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 24/48 (50%), Positives = 28/48 (58%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
C CGSG + LLLCD CD +H CL P + VP G W CP+C Q
Sbjct: 286 CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLAQ 333
Score = 69 (29.3 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 151 SLVLQKKRRRLLPFTPS-EDRSQRLSQMGSLAHAL-----TALQMEFSDDLTYMPGMAPR 204
+L L++K+++L PS + RS +L + L AL TA M + A R
Sbjct: 1072 TLGLKRKQKKLKEPMPSGKKRSTKLESLSDLERALSESKDTASAMATLGEARLKEMEALR 1131
Query: 205 SANQAEFEEGGMQVLSKEDTETLEQCRAMCKRGECPPLVVVYDSCEGF 252
S A EG + + S+ED E L+ C +C++ P++ + C GF
Sbjct: 1132 SLRAAN--EGKV-LCSEEDAE-LKVC--VCQKEPAAPMIQC-ELCRGF 1172
Score = 49 (22.3 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 19/67 (28%), Positives = 27/67 (40%)
Query: 125 KIKKPNLTEEKCDSPQDTRKRRRRSASLVLQKKRR-RLLPFTPSEDRSQRLSQMGSLAHA 183
K KK L+ K D +R R R L Q+ L+P S + ++ A
Sbjct: 1408 KKKKLKLSHTK-DVSSSSRMERERERLLEAQRSSESHLVPSDTSFSEQEDSEDEDAICPA 1466
Query: 184 LTALQME 190
+T LQ E
Sbjct: 1467 VTCLQPE 1473
>UNIPROTKB|Q5F3R2 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0034721 "histone H3-K4 demethylation,
trimethyl-H3-K4-specific" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=ISS] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 EMBL:AJ851588
IPI:IPI00578699 RefSeq:NP_001026200.1 UniGene:Gga.7752 HSSP:Q14839
ProteinModelPortal:Q5F3R2 SMR:Q5F3R2 GeneID:421168 KEGG:gga:421168
CTD:10765 InParanoid:Q5F3R2 OrthoDB:EOG4HT8RC NextBio:20823981
Uniprot:Q5F3R2
Length = 1522
Score = 135 (52.6 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 24/48 (50%), Positives = 28/48 (58%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
C CGSG + LLLCD CD +H CL P + VP G W CP+C Q
Sbjct: 287 CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLAQ 334
Score = 69 (29.3 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 151 SLVLQKKRRRLLPFTPS-EDRSQRLSQMGSLAHAL-----TALQMEFSDDLTYMPGMAPR 204
+L L++K+++L PS + RS +L + L AL TA M + A R
Sbjct: 1073 TLGLKRKQKKLKEPMPSGKKRSTKLESLSDLERALSESKDTASAMATLGEARLKEMEALR 1132
Query: 205 SANQAEFEEGGMQVLSKEDTETLEQCRAMCKRGECPPLVVVYDSCEGF 252
S A EG + + S+ED E L+ C +C++ P++ + C GF
Sbjct: 1133 SLRAAN--EGKV-LCSEEDAE-LKVC--VCQKEPAAPMIQC-ELCRGF 1173
Score = 49 (22.3 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 19/67 (28%), Positives = 27/67 (40%)
Query: 125 KIKKPNLTEEKCDSPQDTRKRRRRSASLVLQKKRR-RLLPFTPSEDRSQRLSQMGSLAHA 183
K KK L+ K D +R R R L Q+ L+P S + ++ A
Sbjct: 1409 KKKKLKLSHTK-DVSSSSRMERERERLLEAQRSSESHLVPSDTSFSEQEDSEDEDAICPA 1467
Query: 184 LTALQME 190
+T LQ E
Sbjct: 1468 VTCLQPE 1474
>UNIPROTKB|A5PLL3 [details] [associations]
symbol:MYST3 "MYST3 protein" species:9606 "Homo sapiens"
[GO:0000786 "nucleosome" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006334
"nucleosome assembly" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016747 "transferase activity,
transferring acyl groups other than amino-acyl groups"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR002717 InterPro:IPR005818 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01853 PROSITE:PS50016 PROSITE:PS51504
SMART:SM00184 SMART:SM00249 SMART:SM00526 GO:GO:0005634
GO:GO:0006355 GO:GO:0016747 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006334
GO:GO:0000786 EMBL:AC090571 UniGene:Hs.491577 HGNC:HGNC:13013
ChiTaRS:KAT6A EMBL:BC142959 IPI:IPI00980404 SMR:A5PLL3
STRING:A5PLL3 Ensembl:ENST00000485568 UCSC:uc010lxd.3
HOVERGEN:HBG099141 Uniprot:A5PLL3
Length = 815
Score = 152 (58.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 62 CEQC-GSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
C C G+ A+ +L CD CD+GFHM+C P + R+P G W+C C +++ R Q+K
Sbjct: 265 CSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRPRKKGRKLLQKK 323
>UNIPROTKB|F1SE29 [details] [associations]
symbol:KAT6A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070776 "MOZ/MORF histone acetyltransferase complex"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0035162 "embryonic hemopoiesis"
evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0030099 "myeloid cell differentiation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0004402 "histone acetyltransferase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR002717 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01853
PROSITE:PS50016 SMART:SM00249 GO:GO:0045892 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.40.630.30
InterPro:IPR016181 SUPFAM:SSF55729 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035019 GO:GO:0035162
GO:GO:0070776 GO:GO:0043966 GO:GO:0004402 GO:GO:0030099
GeneTree:ENSGT00550000074503 OMA:GAYQDCE EMBL:CU627979
Ensembl:ENSSSCT00000007692 Uniprot:F1SE29
Length = 1580
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 39/149 (26%), Positives = 66/149 (44%)
Query: 62 CEQC-GSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRKI 120
C C G+ A+ +L CD CD+GFHM+C P + R+P G W+C C +++ R Q+K
Sbjct: 29 CSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRPRKKGRKLLQKKA 88
Query: 121 IDFFKIKKPNLTEEKCDSPQDTRKRRRRSASLVLQKKRRRLLPFTPSEDRSQRLSQMGSL 180
K + N P++ K++ +L K + P R ++++
Sbjct: 89 AQI-KRRYAN----PIGRPKNRLKKQNTVVLSILSKCPFSKVRTGPGRGRKRKITLSSQS 143
Query: 181 AHALTALQMEFSDDLTYM-PGMAPRSANQ 208
A + +E D L + G P N+
Sbjct: 144 ASSSEEGYLEQIDGLDFCRDGSIPLKFNK 172
>RGD|1311245 [details] [associations]
symbol:Rsf1 "remodeling and spacing factor 1" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006334
"nucleosome assembly" evidence=IEA;ISO] [GO:0006338 "chromatin
remodeling" evidence=IEA;ISO] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA;ISO] [GO:0031213 "RSF complex" evidence=IEA;ISO]
[GO:0042393 "histone binding" evidence=IEA;ISO] [GO:0043392
"negative regulation of DNA binding" evidence=IEA;ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0050434
"positive regulation of viral transcription" evidence=IEA;ISO]
[GO:0016887 "ATPase activity" evidence=ISO] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
RGD:1311245 GO:GO:0045892 GO:GO:0045893 GO:GO:0046872 GO:GO:0008270
GO:GO:0006352 GO:GO:0006338 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016584 GO:GO:0006334 GO:GO:0050434
GO:GO:0043392 GO:GO:0031213 OrthoDB:EOG441QBQ
GeneTree:ENSGT00530000064411 IPI:IPI00368441
Ensembl:ENSRNOT00000037050 UCSC:RGD:1311245 Uniprot:D3ZGQ8
Length = 1444
Score = 148 (57.2 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
D C++CG E +LLCD CD G+H CLRP ++ +P G W CP C
Sbjct: 895 DEPCKKCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPC 942
Score = 49 (22.3 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 204 RSANQAEFEEGGMQVLSKEDTETLEQCRAMCKRG 237
R + +E EE M S++D T E R++ KRG
Sbjct: 1247 RRLSSSESEESYMSKNSEDDELTKESKRSIRKRG 1280
Score = 43 (20.2 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 137 DSPQDTRKRRRRSASLVLQKKRRRL 161
D + KR +R+A+ +KKRRRL
Sbjct: 1072 DEERKENKRPQRAAA-ARRKKRRRL 1095
>RGD|708360 [details] [associations]
symbol:Phrf1 "PHD and ring finger domains 1" species:10116
"Rattus norvegicus" [GO:0006366 "transcription from RNA polymerase
II promoter" evidence=IMP] [GO:0006397 "mRNA processing"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IMP]
[GO:0070063 "RNA polymerase binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 RGD:708360 Prosite:PS00518
GO:GO:0019904 GO:GO:0046872 GO:GO:0008270 GO:GO:0006397
GO:GO:0006366 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AC118351 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM OrthoDB:EOG4MSD0F
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 EMBL:U49057
IPI:IPI00211009 IPI:IPI00915115 PIR:T31422 RefSeq:NP_620793.1
UniGene:Rn.10530 ProteinModelPortal:Q63625 STRING:Q63625
PRIDE:Q63625 Ensembl:ENSRNOT00000023376 Ensembl:ENSRNOT00000051755
GeneID:245925 KEGG:rno:245925 UCSC:RGD:708360 InParanoid:Q63625
NextBio:623186 ArrayExpress:Q63625 Genevestigator:Q63625
Uniprot:Q63625
Length = 1685
Score = 160 (61.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107
CE CG +R + LLLCD CD G+HM+CL P + VP+ W CP+C+
Sbjct: 191 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECA 236
Score = 39 (18.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 9/42 (21%), Positives = 20/42 (47%)
Query: 132 TEEKCDSPQDTRKRRRRSASLVLQKKRRRLLPFTPSEDRSQR 173
+ + S +RK+ ++ + + +R R + S DR+ R
Sbjct: 1002 SRSRSTSSSRSRKKTKKKKKVAREHQRTRSSTRSGSRDRTSR 1043
>UNIPROTKB|Q63625 [details] [associations]
symbol:Phrf1 "PHD and RING finger domain-containing protein
1" species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 RGD:708360
Prosite:PS00518 GO:GO:0019904 GO:GO:0046872 GO:GO:0008270
GO:GO:0006397 GO:GO:0006366 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AC118351 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM OrthoDB:EOG4MSD0F
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 EMBL:U49057
IPI:IPI00211009 IPI:IPI00915115 PIR:T31422 RefSeq:NP_620793.1
UniGene:Rn.10530 ProteinModelPortal:Q63625 STRING:Q63625
PRIDE:Q63625 Ensembl:ENSRNOT00000023376 Ensembl:ENSRNOT00000051755
GeneID:245925 KEGG:rno:245925 UCSC:RGD:708360 InParanoid:Q63625
NextBio:623186 ArrayExpress:Q63625 Genevestigator:Q63625
Uniprot:Q63625
Length = 1685
Score = 160 (61.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107
CE CG +R + LLLCD CD G+HM+CL P + VP+ W CP+C+
Sbjct: 191 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECA 236
Score = 39 (18.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 9/42 (21%), Positives = 20/42 (47%)
Query: 132 TEEKCDSPQDTRKRRRRSASLVLQKKRRRLLPFTPSEDRSQR 173
+ + S +RK+ ++ + + +R R + S DR+ R
Sbjct: 1002 SRSRSTSSSRSRKKTKKKKKVAREHQRTRSSTRSGSRDRTSR 1043
>MGI|MGI:2151152 [details] [associations]
symbol:Baz2a "bromodomain adjacent to zinc finger domain,
2A" species:10090 "Mus musculus" [GO:0000183 "chromatin silencing
at rDNA" evidence=IMP;IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006306 "DNA methylation"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IGI]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016575
"histone deacetylation" evidence=IDA] [GO:0033553 "rDNA
heterochromatin" evidence=IDA] [GO:0034770 "histone H4-K20
methylation" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051567 "histone H3-K9 methylation" evidence=IDA]
[GO:0070577 "histone acetyl-lysine binding" evidence=IDA]
[GO:0070869 "heterochromatin assembly involved in chromatin
silencing" evidence=IMP;IDA] [GO:0070933 "histone H4 deacetylation"
evidence=IDA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01429
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982
SMART:SM00249 SMART:SM00297 SMART:SM00384 SMART:SM00391
MGI:MGI:2151152 GO:GO:0005730 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0003723 SUPFAM:SSF54171
GO:GO:0000183 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0006306
GO:GO:0051567 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359 GO:GO:0005677
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 HOGENOM:HOG000169644
HOVERGEN:HBG107494 OrthoDB:EOG44QT05 ChiTaRS:BAZ2A GO:GO:0033553
GO:GO:0070869 GO:GO:0070933 GO:GO:0034770 Gene3D:3.30.890.10
EMBL:AK155523 EMBL:AJ309544 EMBL:AK122243 IPI:IPI00130157
IPI:IPI00944144 IPI:IPI00944160 UniGene:Mm.252213
ProteinModelPortal:Q91YE5 SMR:Q91YE5 STRING:Q91YE5
PhosphoSite:Q91YE5 PaxDb:Q91YE5 PRIDE:Q91YE5 UCSC:uc007hlj.1
InParanoid:Q80U42 CleanEx:MM_BAZ2A Genevestigator:Q91YE5
GermOnline:ENSMUSG00000040054 Uniprot:Q91YE5
Length = 1889
Score = 154 (59.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 60/211 (28%), Positives = 90/211 (42%)
Query: 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
V C C G+ E LLLCD CD+G H+ C RP + VP G W C C Q+ ++QR
Sbjct: 1663 VTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCAVCLSQQVEEEYTQRP 1722
Query: 120 IIDFFKIKKPNLTEEKCDSPQ-DTRKR---RRRSASLVLQKKRRRLLPFTPSEDRSQRLS 175
F K + + P+ D+R+R R R + V + L P P R S
Sbjct: 1723 --GFPKRGQKRKSSFPLTFPEGDSRRRMLSRSRDSPAVPRYPEDGLSP--PKRRRHSMRS 1778
Query: 176 QMGSLAHA-LTALQMEFSDDLTYMPGMAPRSANQAEFEEGGMQVLSKE-DTETLEQ--CR 231
L + ++ME S D + P + P N G +V+ D T+ + R
Sbjct: 1779 HHSDLTFCEIILMEME-SHDAAW-PFLEP--VNP-RLVSGYRRVIKNPMDFSTMRERLLR 1833
Query: 232 AMCKRGE--CPPLVVVYDSCEGFTVEADGQI 260
E ++V+D+C+ F E D ++
Sbjct: 1834 GGYTSSEEFAADALLVFDNCQTFN-EDDSEV 1863
>MGI|MGI:2136980 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:2136980 GO:GO:0007275 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927
HOGENOM:HOG000290719 OMA:ECSKPRE ChiTaRS:KDM5A EMBL:AC155720
EMBL:AC078896 EMBL:AK135085 EMBL:AK144877 EMBL:AK166055
EMBL:BC080691 IPI:IPI00849089 RefSeq:NP_666109.2 UniGene:Mm.404761
UniGene:Mm.463658 ProteinModelPortal:Q3UXZ9 SMR:Q3UXZ9
IntAct:Q3UXZ9 STRING:Q3UXZ9 PhosphoSite:Q3UXZ9 PaxDb:Q3UXZ9
PRIDE:Q3UXZ9 Ensembl:ENSMUST00000100996 GeneID:214899
KEGG:mmu:214899 UCSC:uc009dne.2 InParanoid:Q3UXZ9 NextBio:374501
Bgee:Q3UXZ9 CleanEx:MM_RBP2 Genevestigator:Q3UXZ9 Uniprot:Q3UXZ9
Length = 1690
Score = 136 (52.9 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 23/45 (51%), Positives = 27/45 (60%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG G ++LLLCD CD +H CL P + VP G W CPKC
Sbjct: 296 CMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGDWRCPKC 340
Score = 64 (27.6 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 44/193 (22%), Positives = 77/193 (39%)
Query: 90 RPIVVRVPIGTWLCPKCSGQ-RRVRSFSQRKIIDFFKIKKPNLTEEKCDSPQD------T 142
RPI VR+ P+ Q R++ +R F K K + T + SP+ +
Sbjct: 1031 RPIPVRLDA----LPQVESQVAAARAWRERTGRTFLK-KNSSHTLLQVLSPRTDIGVYGS 1085
Query: 143 RKRRRRSASLVLQKKRRRLLPFTPSEDRSQRLSQMGSLAHALTALQMEFSDDLTYMPGMA 202
K RR+ +++K++ + L P D + L + A + + ++ M +
Sbjct: 1086 GKNRRKKVKEIIEKEKEKDLDLEPLSDLEEGLEESRDTAMVVAVFKEREQKEIEAMHSL- 1144
Query: 203 PRSANQAEF------EEGGMQVLSKEDTETLEQCRAMCK---RGECPPLVVVYDSCEGFT 253
R+AN A+ EE + K + + QC +CK C PL +G
Sbjct: 1145 -RAANLAKMTIVERIEEVKFCICRKTASGFMLQCE-LCKDWFHNSCVPLPKSSSQKKG-- 1200
Query: 254 VEADGQIKDMTFI 266
+ Q KD+ F+
Sbjct: 1201 --SSWQAKDVKFL 1211
>UNIPROTKB|J9P712 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907
GeneTree:ENSGT00530000063661 EMBL:AAEX03011329
Ensembl:ENSCAFT00000046673 Uniprot:J9P712
Length = 1626
Score = 160 (61.4 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107
CE CG +R + LLLCD CD G+HM+CL P + VP+ W CP+C+
Sbjct: 182 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECA 227
Score = 37 (18.1 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 144 KRRRRSASLVLQKKRRRLLPFTPSEDRS 171
KRRRR+ RR+ P + + RS
Sbjct: 331 KRRRRTGRRKKASGRRKAQPRSSVKSRS 358
>UNIPROTKB|F1PXY6 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 OMA:YMKKLHM
GeneTree:ENSGT00530000063661 EMBL:AAEX03011329
Ensembl:ENSCAFT00000010559 Uniprot:F1PXY6
Length = 1637
Score = 160 (61.4 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107
CE CG +R + LLLCD CD G+HM+CL P + VP+ W CP+C+
Sbjct: 191 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECA 236
Score = 37 (18.1 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 144 KRRRRSASLVLQKKRRRLLPFTPSEDRS 171
KRRRR+ RR+ P + + RS
Sbjct: 340 KRRRRTGRRKKASGRRKAQPRSSVKSRS 367
>UNIPROTKB|E9PJ24 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AP006284 HGNC:HGNC:24351
ChiTaRS:PHRF1 IPI:IPI00978364 Ensembl:ENST00000533464
UCSC:uc010qwe.2 ArrayExpress:E9PJ24 Bgee:E9PJ24 Uniprot:E9PJ24
Length = 1645
Score = 160 (61.4 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107
CE CG +R + LLLCD CD G+HM+CL P + VP+ W CP+C+
Sbjct: 182 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECA 227
Score = 37 (18.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 20/68 (29%), Positives = 26/68 (38%)
Query: 164 FTPSEDRSQRLSQMGSLAHALTALQM--EFSD--DLTYMPGMAPRSANQAEFEEGGMQVL 219
F P +D+ QR L Q+ E D D T AP S+ E G +L
Sbjct: 796 FRPVDDKEQRKENPSPLFSIKKTKQLRSEVYDPSDPTGSDSSAPGSSP----ERSGPGLL 851
Query: 220 SKEDTETL 227
E T T+
Sbjct: 852 PSEITRTI 859
>UNIPROTKB|F8WEF5 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 EMBL:AP006284
HGNC:HGNC:24351 ChiTaRS:PHRF1 IPI:IPI01013297
Ensembl:ENST00000413872 UCSC:uc009ybz.1 ArrayExpress:F8WEF5
Bgee:F8WEF5 Uniprot:F8WEF5
Length = 1647
Score = 160 (61.4 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107
CE CG +R + LLLCD CD G+HM+CL P + VP+ W CP+C+
Sbjct: 185 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECA 230
Score = 37 (18.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 20/68 (29%), Positives = 26/68 (38%)
Query: 164 FTPSEDRSQRLSQMGSLAHALTALQM--EFSD--DLTYMPGMAPRSANQAEFEEGGMQVL 219
F P +D+ QR L Q+ E D D T AP S+ E G +L
Sbjct: 798 FRPVDDKEQRKENPSPLFSIKKTKQLRSEVYDPSDPTGSDSSAPGSSP----ERSGPGLL 853
Query: 220 SKEDTETL 227
E T T+
Sbjct: 854 PSEITRTI 861
>UNIPROTKB|Q9P1Y6 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0070063 "RNA polymerase binding" evidence=ISS]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0006366
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 InterPro:IPR017907 EMBL:AP006284
PharmGKB:PA164718737 HSSP:Q9UIG0 EMBL:AB040975 EMBL:BC004950
EMBL:BC013381 EMBL:BC029651 EMBL:BC041631 EMBL:BC136615
EMBL:BC144293 EMBL:BC146771 IPI:IPI00001813 IPI:IPI00827706
IPI:IPI00942878 RefSeq:NP_065952.2 UniGene:Hs.325838
ProteinModelPortal:Q9P1Y6 SMR:Q9P1Y6 IntAct:Q9P1Y6 STRING:Q9P1Y6
PhosphoSite:Q9P1Y6 DMDM:296439275 PaxDb:Q9P1Y6 PRIDE:Q9P1Y6
Ensembl:ENST00000264555 Ensembl:ENST00000416188
Ensembl:ENST00000534320 GeneID:57661 KEGG:hsa:57661 UCSC:uc001lqe.3
UCSC:uc010qwc.2 CTD:57661 GeneCards:GC11P000567 H-InvDB:HIX0201594
HGNC:HGNC:24351 HPA:HPA019867 MIM:611780 neXtProt:NX_Q9P1Y6
PharmGKB:PA164724459 eggNOG:NOG300312 HOVERGEN:HBG108250
InParanoid:Q9P1Y6 OMA:YMKKLHM OrthoDB:EOG4MSD0F ChiTaRS:PHRF1
GenomeRNAi:57661 NextBio:64425 ArrayExpress:Q9P1Y6 Bgee:Q9P1Y6
CleanEx:HS_PHRF1 Genevestigator:Q9P1Y6 GO:GO:0070063 Uniprot:Q9P1Y6
Length = 1649
Score = 160 (61.4 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107
CE CG +R + LLLCD CD G+HM+CL P + VP+ W CP+C+
Sbjct: 186 CEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECA 231
Score = 37 (18.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 20/68 (29%), Positives = 26/68 (38%)
Query: 164 FTPSEDRSQRLSQMGSLAHALTALQM--EFSD--DLTYMPGMAPRSANQAEFEEGGMQVL 219
F P +D+ QR L Q+ E D D T AP S+ E G +L
Sbjct: 800 FRPVDDKEQRKENPSPLFSIKKTKQLRSEVYDPSDPTGSDSSAPGSSP----ERSGPGLL 855
Query: 220 SKEDTETL 227
E T T+
Sbjct: 856 PSEITRTI 863
>UNIPROTKB|F1MCP3 [details] [associations]
symbol:BAZ2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01429 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00297 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 SUPFAM:SSF54171
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:DAAA02004468
EMBL:DAAA02004469 EMBL:DAAA02004470 IPI:IPI00733463
Ensembl:ENSBTAT00000046021 Uniprot:F1MCP3
Length = 2110
Score = 153 (58.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 65/223 (29%), Positives = 96/223 (43%)
Query: 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC----SGQR-RVRS 114
V C+ C G+ E LLLCD CDKG H C RP + +P G W CP C SGQ +++
Sbjct: 1875 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACIAKASGQTLKIKK 1934
Query: 115 FSQR-KIIDFFKIKKPNLTEEKCDSPQ-DTRKRRRRSASLVLQKKRRRLLPFTPSEDRS- 171
+ K + K KK LT + D T +R + ++K S+ S
Sbjct: 1935 LHVKGKKSESKKGKKVTLTGDTEDEDSASTSSSLKRGVKDLKKRKMEENSSINISKQESF 1994
Query: 172 ---QRLSQMGSLAHALTAL---QMEFSDDLTYMPGMAPRSANQAEFEEGGMQVLSKE-DT 224
++ + S AL ++ +ME +D P + P N + G +V+ K D
Sbjct: 1995 TSVKKPKRDDSKDLALCSMILTEMETHEDA--WPFLLP--VN-LKLVPGYKKVIKKPMDF 2049
Query: 225 ETLEQCRAMCKRGECPPLV-------VVYDSCEGFTVEADGQI 260
T+ R G+ P L +V+D+CE F E D I
Sbjct: 2050 STI---REKLSSGQYPNLETFALDVRLVFDNCETFN-EDDSDI 2088
>UNIPROTKB|E1BNJ5 [details] [associations]
symbol:BAZ2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01429 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00297 SMART:SM00391
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 OMA:DSDDQAD
EMBL:DAAA02004468 EMBL:DAAA02004469 EMBL:DAAA02004470
IPI:IPI00924289 Ensembl:ENSBTAT00000061234 Uniprot:E1BNJ5
Length = 2169
Score = 153 (58.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 65/223 (29%), Positives = 96/223 (43%)
Query: 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC----SGQR-RVRS 114
V C+ C G+ E LLLCD CDKG H C RP + +P G W CP C SGQ +++
Sbjct: 1934 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACIAKASGQTLKIKK 1993
Query: 115 FSQR-KIIDFFKIKKPNLTEEKCDSPQ-DTRKRRRRSASLVLQKKRRRLLPFTPSEDRS- 171
+ K + K KK LT + D T +R + ++K S+ S
Sbjct: 1994 LHVKGKKSESKKGKKVTLTGDTEDEDSASTSSSLKRGVKDLKKRKMEENSSINISKQESF 2053
Query: 172 ---QRLSQMGSLAHALTAL---QMEFSDDLTYMPGMAPRSANQAEFEEGGMQVLSKE-DT 224
++ + S AL ++ +ME +D P + P N + G +V+ K D
Sbjct: 2054 TSVKKPKRDDSKDLALCSMILTEMETHEDA--WPFLLP--VN-LKLVPGYKKVIKKPMDF 2108
Query: 225 ETLEQCRAMCKRGECPPLV-------VVYDSCEGFTVEADGQI 260
T+ R G+ P L +V+D+CE F E D I
Sbjct: 2109 STI---REKLSSGQYPNLETFALDVRLVFDNCETFN-EDDSDI 2147
>UNIPROTKB|H0YCN2 [details] [associations]
symbol:RSF1 "Remodeling and spacing factor 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:AP000580
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 EMBL:AP000609
EMBL:AP002343 HGNC:HGNC:18118 ChiTaRS:RSF1 Ensembl:ENST00000526324
Bgee:H0YCN2 Uniprot:H0YCN2
Length = 803
Score = 148 (57.2 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
D C++CG E +LLCD CD G+H CLRP ++ +P G W CP C
Sbjct: 692 DEPCKKCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPC 739
>RGD|1304892 [details] [associations]
symbol:Kat6a "K(lysine) acetyltransferase 6A" species:10116
"Rattus norvegicus" [GO:0000786 "nucleosome" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO;ISS] [GO:0003682 "chromatin binding"
evidence=ISO] [GO:0004402 "histone acetyltransferase activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS]
[GO:0006334 "nucleosome assembly" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006473 "protein
acetylation" evidence=ISO] [GO:0008134 "transcription factor
binding" evidence=ISO;ISS] [GO:0008270 "zinc ion binding"
evidence=ISO;ISS] [GO:0016407 "acetyltransferase activity"
evidence=ISO;ISS] [GO:0016573 "histone acetylation"
evidence=ISO;ISS] [GO:0016605 "PML body" evidence=ISO] [GO:0030099
"myeloid cell differentiation" evidence=ISO;ISS] [GO:0035019
"somatic stem cell maintenance" evidence=IEA;ISO] [GO:0035162
"embryonic hemopoiesis" evidence=IEA;ISO] [GO:0035909 "aorta
morphogenesis" evidence=ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO;ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0060325 "face morphogenesis" evidence=ISO]
[GO:0070776 "MOZ/MORF histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0090398 "cellular senescence" evidence=ISO]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002717
InterPro:IPR005818 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01853
PROSITE:PS50016 PROSITE:PS51504 SMART:SM00184 SMART:SM00249
SMART:SM00526 RGD:1304892 GO:GO:0045892 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0035019
GO:GO:0008134 GO:GO:0006334 GO:GO:0035162 GO:GO:0000786
GO:GO:0070776 GO:GO:0043966 GO:GO:0004402 GO:GO:0030099
eggNOG:COG5027 GeneTree:ENSGT00550000074503 CTD:7994
HOGENOM:HOG000234365 HOVERGEN:HBG052563 KO:K11305 OMA:GAYQDCE
OrthoDB:EOG48KR9D EMBL:AABR03100194 EMBL:AB195309 IPI:IPI00365320
RefSeq:NP_001094040.1 UniGene:Rn.33802 ProteinModelPortal:Q5TKR9
SMR:Q5TKR9 STRING:Q5TKR9 PhosphoSite:Q5TKR9 PRIDE:Q5TKR9
Ensembl:ENSRNOT00000037389 GeneID:306571 KEGG:rno:306571
UCSC:RGD:1304892 InParanoid:Q5TKR9 NextBio:656228
Genevestigator:Q5TKR9 GermOnline:ENSRNOG00000025174 Uniprot:Q5TKR9
Length = 1998
Score = 152 (58.6 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 62 CEQC-GSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
C C G+ A+ +L CD CD+GFHM+C P + R+P G W+C C +++ R Q+K
Sbjct: 265 CSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRPRKKGRKLLQKK 323
>MGI|MGI:2442415 [details] [associations]
symbol:Kat6a "K(lysine) acetyltransferase 6A" species:10090
"Mus musculus" [GO:0000786 "nucleosome" evidence=IEA] [GO:0003007
"heart morphogenesis" evidence=IGI;IMP] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=IGI]
[GO:0004402 "histone acetyltransferase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0016407
"acetyltransferase activity" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0016605 "PML body" evidence=ISO] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016746 "transferase
activity, transferring acyl groups" evidence=IEA] [GO:0016747
"transferase activity, transferring acyl groups other than
amino-acyl groups" evidence=IEA] [GO:0030099 "myeloid cell
differentiation" evidence=ISO] [GO:0035019 "somatic stem cell
maintenance" evidence=IMP] [GO:0035162 "embryonic hemopoiesis"
evidence=IMP] [GO:0035909 "aorta morphogenesis" evidence=IGI;IMP]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IMP] [GO:0043966 "histone
H3 acetylation" evidence=ISO;IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0060325 "face
morphogenesis" evidence=IGI;IMP] [GO:0070776 "MOZ/MORF histone
acetyltransferase complex" evidence=ISO] [GO:0090398 "cellular
senescence" evidence=ISO] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR002717 InterPro:IPR005818 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01853 PROSITE:PS50016 PROSITE:PS51504
SMART:SM00184 SMART:SM00249 SMART:SM00526 MGI:MGI:2442415
GO:GO:0045892 GO:GO:0045893 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0035019
GO:GO:0008134 GO:GO:0006334 GO:GO:0035162 GO:GO:0000786
GO:GO:0070776 GO:GO:0043966 GO:GO:0004402 GO:GO:0030099
eggNOG:COG5027 HOGENOM:HOG000234365 HOVERGEN:HBG052563
OrthoDB:EOG48KR9D ChiTaRS:KAT6A EMBL:AC115361 EMBL:AK028058
EMBL:AK036885 EMBL:AK039615 EMBL:AK054322 IPI:IPI00380122
UniGene:Mm.182776 ProteinModelPortal:Q8BZ21 SMR:Q8BZ21
STRING:Q8BZ21 PhosphoSite:Q8BZ21 PRIDE:Q8BZ21 UCSC:uc009lec.1
InParanoid:Q8BZ21 Genevestigator:Q8BZ21
GermOnline:ENSMUSG00000031540 Uniprot:Q8BZ21
Length = 2003
Score = 152 (58.6 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 62 CEQC-GSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
C C G+ A+ +L CD CD+GFHM+C P + R+P G W+C C +++ R Q+K
Sbjct: 265 CSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRPRKKGRKLLQKK 323
>UNIPROTKB|Q92794 [details] [associations]
symbol:KAT6A "Histone acetyltransferase KAT6A" species:9606
"Homo sapiens" [GO:0000786 "nucleosome" evidence=IEA] [GO:0006334
"nucleosome assembly" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0035019 "somatic stem cell
maintenance" evidence=IEA] [GO:0035162 "embryonic hemopoiesis"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IDA]
[GO:0016407 "acetyltransferase activity" evidence=IDA] [GO:0016573
"histone acetylation" evidence=IDA] [GO:0030099 "myeloid cell
differentiation" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070776 "MOZ/MORF histone acetyltransferase
complex" evidence=IDA] [GO:0043966 "histone H3 acetylation"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0006473 "protein
acetylation" evidence=IDA] [GO:0090398 "cellular senescence"
evidence=IMP] [GO:0016605 "PML body" evidence=IDA] [GO:0006323 "DNA
packaging" evidence=TAS] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR002717 InterPro:IPR005818 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01853 PROSITE:PS50016 PROSITE:PS51504
SMART:SM00184 SMART:SM00249 SMART:SM00526 GO:GO:0045892
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0006351
GO:GO:0003713 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0035019
GO:GO:0008134 GO:GO:0006334 GO:GO:0006323 EMBL:AB084281
GO:GO:0035162 GO:GO:0000786 GO:GO:0070776 GO:GO:0043966
GO:GO:0004402 GO:GO:0030099 eggNOG:COG5027 PDB:3V43 PDBsum:3V43
EMBL:U47742 EMBL:AC090571 IPI:IPI00023340 RefSeq:NP_001092882.1
RefSeq:NP_001092883.1 RefSeq:NP_006757.2 UniGene:Hs.491577 PDB:1M36
PDB:2LN0 PDB:2OZU PDB:2RC4 PDBsum:1M36 PDBsum:2LN0 PDBsum:2OZU
PDBsum:2RC4 ProteinModelPortal:Q92794 SMR:Q92794 IntAct:Q92794
STRING:Q92794 PhosphoSite:Q92794 DMDM:215274095 PaxDb:Q92794
PRIDE:Q92794 DNASU:7994 Ensembl:ENST00000265713
Ensembl:ENST00000396930 Ensembl:ENST00000406337 GeneID:7994
KEGG:hsa:7994 UCSC:uc003xon.4 CTD:7994 GeneCards:GC08M041786
HGNC:HGNC:13013 HPA:CAB017023 MIM:601408 neXtProt:NX_Q92794
PharmGKB:PA37592 HOGENOM:HOG000234365 HOVERGEN:HBG052563
InParanoid:Q92794 KO:K11305 OMA:GAYQDCE OrthoDB:EOG48KR9D
PhylomeDB:Q92794 ChiTaRS:KAT6A EvolutionaryTrace:Q92794
GenomeRNAi:7994 NextBio:30540 ArrayExpress:Q92794 Bgee:Q92794
CleanEx:HS_MYST3 Genevestigator:Q92794 GermOnline:ENSG00000083168
Uniprot:Q92794
Length = 2004
Score = 152 (58.6 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 62 CEQC-GSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
C C G+ A+ +L CD CD+GFHM+C P + R+P G W+C C +++ R Q+K
Sbjct: 265 CSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRPRKKGRKLLQKK 323
>UNIPROTKB|E2R922 [details] [associations]
symbol:KAT6A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016747 "transferase activity, transferring
acyl groups other than amino-acyl groups" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000786 "nucleosome"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR002717 InterPro:IPR005818 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01853 PROSITE:PS50016 PROSITE:PS51504
SMART:SM00184 SMART:SM00249 SMART:SM00526 GO:GO:0005634
GO:GO:0006355 GO:GO:0016747 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006334
GO:GO:0000786 GeneTree:ENSGT00550000074503 OMA:GAYQDCE
EMBL:AAEX03010372 EMBL:AAEX03010373 EMBL:AAEX03010374
EMBL:AAEX03010375 EMBL:AAEX03010376 Ensembl:ENSCAFT00000009115
Uniprot:E2R922
Length = 2027
Score = 152 (58.6 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 62 CEQC-GSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
C C G+ A+ +L CD CD+GFHM+C P + R+P G W+C C +++ R Q+K
Sbjct: 265 CSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRPRKKGRKLLQKK 323
>UNIPROTKB|F1P0N4 [details] [associations]
symbol:DPF3 "Zinc finger protein DPF3" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00184 SMART:SM00249 SMART:SM00355 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 IPI:IPI00589005 EMBL:AADN02033575
EMBL:AADN02033576 Ensembl:ENSGALT00000015230 ArrayExpress:F1P0N4
Uniprot:F1P0N4
Length = 379
Score = 143 (55.4 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 24/53 (45%), Positives = 31/53 (58%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRS 114
C CG+ E ++LL CD CD+G+HM CL P V P G+W C C R R+
Sbjct: 320 CSLCGTSENDDQLLFCDDCDRGYHMYCLNPPVFEPPEGSWSCHLCRELLRERA 372
>UNIPROTKB|A8DZJ1 [details] [associations]
symbol:baz1b "Tyrosine-protein kinase BAZ1B" species:8355
"Xenopus laevis" [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0004713 "protein tyrosine kinase activity" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0016572 "histone phosphorylation" evidence=ISS] [GO:0035173
"histone kinase activity" evidence=ISS] [GO:0070577 "histone
acetyl-lysine binding" evidence=ISS] InterPro:IPR001841
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00297
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0006974 GO:GO:0004715
GO:GO:0004713 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016585 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 GO:GO:0070577 InterPro:IPR018501 InterPro:IPR013136
Pfam:PF10537 PROSITE:PS50827 PROSITE:PS51136 CTD:9031 KO:K11658
GO:GO:0035173 EMBL:AM084226 EMBL:BC072944 EMBL:BC126047
RefSeq:NP_001136259.1 UniGene:Xl.16009 IntAct:A8DZJ1 PRIDE:A8DZJ1
GeneID:443594 KEGG:xla:443594 Xenbase:XB-GENE-866493 Uniprot:A8DZJ1
Length = 1441
Score = 150 (57.9 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 29/102 (28%), Positives = 56/102 (54%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC---SGQR--RVRSFS 116
C+ C ++L+LCD+C+K FH+ CLRP++ +P G WLCP C + +R R R+++
Sbjct: 1154 CKVCRKKGEDDKLILCDECNKAFHLFCLRPVLFNIPDGEWLCPACQPATARRSSRGRNYA 1213
Query: 117 QRKIIDFFKIKKPNLTEEKCDSPQDTRKRRRRSASLVLQKKR 158
+ D + ++ +EE+ + D + + L+ ++
Sbjct: 1214 EDSTQDEDEEEEEEESEEEEEEESDEEEEEQEMMGQRLRSRK 1255
>UNIPROTKB|F1NFV8 [details] [associations]
symbol:BAZ1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000228
"nuclear chromosome" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0008623 "CHRAC" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0046872 GO:GO:0008270 GO:GO:0006261
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000228 OMA:SSFQNNV GO:GO:0008623
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537 SMART:SM00571
PROSITE:PS50827 PROSITE:PS51136 GeneTree:ENSGT00660000095335
EMBL:AADN02003387 EMBL:AADN02003388 EMBL:AADN02003389
IPI:IPI00585200 Ensembl:ENSGALT00000016289 Uniprot:F1NFV8
Length = 1522
Score = 150 (57.9 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
C+ C AE ++LCD CD+G+H C+RP + +P G W CP+C ++R R S R+
Sbjct: 1114 CKVCRKKGDAESMVLCDGCDRGYHTYCIRPKLKIIPEGDWFCPECRPKQRSRRLSSRQ 1171
>UNIPROTKB|F1P0N5 [details] [associations]
symbol:DPF3 "Zinc finger protein DPF3" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00184 SMART:SM00249 SMART:SM00355 GO:GO:0046872
GO:GO:0008270 GO:GO:0071565 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 IPI:IPI00598666 OMA:TNMTEAV
EMBL:AADN02033575 EMBL:AADN02033576 Ensembl:ENSGALT00000015229
ArrayExpress:F1P0N5 Uniprot:F1P0N5
Length = 416
Score = 143 (55.4 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 24/53 (45%), Positives = 31/53 (58%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRS 114
C CG+ E ++LL CD CD+G+HM CL P V P G+W C C R R+
Sbjct: 357 CSLCGTSENDDQLLFCDDCDRGYHMYCLNPPVFEPPEGSWSCHLCRELLRERA 409
>UNIPROTKB|F1P8R2 [details] [associations]
symbol:RSF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050434 "positive regulation of viral
transcription" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043392 "negative regulation of DNA binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006334 "nucleosome assembly" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0045892
GO:GO:0045893 GO:GO:0046872 GO:GO:0008270 GO:GO:0006352
GO:GO:0006338 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016584 GO:GO:0006334 GO:GO:0050434
GO:GO:0043392 GO:GO:0031213 CTD:51773 KO:K11657 OMA:QPRVLPS
EMBL:AAEX03012787 GeneTree:ENSGT00530000064411 EMBL:AAEX03012788
RefSeq:XP_534002.2 Ensembl:ENSCAFT00000007880 GeneID:476797
KEGG:cfa:476797 Uniprot:F1P8R2
Length = 1434
Score = 148 (57.2 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
D C++CG E +LLCD CD G+H CLRP ++ +P G W CP C
Sbjct: 888 DEPCKKCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPC 935
Score = 44 (20.5 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 204 RSANQAEFEEGGMQVLSKEDTETLEQCRAMCKRG 237
R + +E EE M S++D E R++ KRG
Sbjct: 1239 RRLSSSESEESYMSKNSEDDELAKESKRSVRKRG 1272
Score = 43 (20.2 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 137 DSPQDTRKRRRRSASLVLQKKRRRL 161
D + KR +R+A+ +KKRRRL
Sbjct: 1065 DEERKENKRPQRAAA-ARRKKRRRL 1088
>UNIPROTKB|P58270 [details] [associations]
symbol:DPF3 "Zinc finger protein DPF3" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00184 SMART:SM00249 SMART:SM00355 GO:GO:0005634
GO:GO:0007399 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359
HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 OrthoDB:EOG4T4CX1 EMBL:AF362754 EMBL:AF362753
EMBL:AF362756 EMBL:AF362755 IPI:IPI00575057 IPI:IPI00589005
IPI:IPI00598666 IPI:IPI00600182 RefSeq:NP_989970.1 UniGene:Gga.46
ProteinModelPortal:P58270 GeneID:395351 KEGG:gga:395351 CTD:8110
InParanoid:P58270 NextBio:20815436 Uniprot:P58270
Length = 427
Score = 143 (55.4 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 24/53 (45%), Positives = 31/53 (58%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRS 114
C CG+ E ++LL CD CD+G+HM CL P V P G+W C C R R+
Sbjct: 368 CSLCGTSENDDQLLFCDDCDRGYHMYCLNPPVFEPPEGSWSCHLCRELLRERA 420
>FB|FBgn0037344 [details] [associations]
symbol:CG2926 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639
PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184 SMART:SM00249
Prosite:PS00518 EMBL:AE014297 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 GO:GO:0000381 HSSP:Q9UIG0
GeneTree:ENSGT00530000063661 FlyBase:FBgn0037344 RefSeq:NP_649554.1
ProteinModelPortal:Q9VNE0 SMR:Q9VNE0 IntAct:Q9VNE0 MINT:MINT-746219
STRING:Q9VNE0 PRIDE:Q9VNE0 EnsemblMetazoa:FBtr0078752 GeneID:40676
KEGG:dme:Dmel_CG2926 UCSC:CG2926-RA InParanoid:Q9VNE0 OMA:YEDLFEP
PhylomeDB:Q9VNE0 GenomeRNAi:40676 NextBio:819988
ArrayExpress:Q9VNE0 Bgee:Q9VNE0 Uniprot:Q9VNE0
Length = 2296
Score = 141 (54.7 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
CE C S +R + +LLCD C++G+HM CL P + +P G+W C C
Sbjct: 247 CEICESPDREDVMLLCDSCNQGYHMDCLDPPLYEIPAGSWYCDNC 291
Score = 53 (23.7 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 25/80 (31%), Positives = 35/80 (43%)
Query: 102 LCPKC-SGQRRV-RSFSQRKIIDFFKIKKPNLTEEKCDSPQDTRKRRRR-SASLVLQKKR 158
L PK S RV +S S+ + + K + + + SP +R RRRR S S +
Sbjct: 1167 LTPKMRSKSPRVSKSISRSRSGSRSRCKSKSFSRSRSRSPSRSRNRRRRNSRSKSYSRSH 1226
Query: 159 RRLLPFTPSEDRSQRLSQMG 178
R + S R QR S G
Sbjct: 1227 SRSRSRSNSHSR-QRFSFRG 1245
Score = 48 (22.0 bits), Expect = 4.6e-07, Sum P(3) = 4.6e-07
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 294 TDPSKSLVICPDKRGNIARFINGINN 319
T PSK L P G++A +G+ N
Sbjct: 2039 TPPSKKLTPLPKAGGSVASSSSGVGN 2064
Score = 45 (20.9 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 11/46 (23%), Positives = 27/46 (58%)
Query: 132 TEEKCDSPQDTRKRRRRSASLVLQKKRRRLLPFTPSED-RSQRLSQ 176
+ + SP+D K++++ + +K+R+R +P+ R +R+S+
Sbjct: 1472 SRSRSKSPKDMHKKKKKKSDK--KKRRKRTGSSSPTTAARMRRISR 1515
Score = 45 (20.9 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 127 KKPNLTEEKCDSPQDTRKRRRR--SASLVLQKKRRRLL----PFTPSED 169
K P +K D +KRR+R S+S + RR+ PF ++D
Sbjct: 1477 KSPKDMHKKKKKKSDKKKRRKRTGSSSPTTAARMRRISRQRDPFEDADD 1525
Score = 40 (19.1 bits), Expect = 9.0e-06, Sum P(3) = 9.0e-06
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 132 TEEKCDSPQDTRKRRRRSASLVLQKKRRRLLPFTPSEDRSQRLSQMGSLAHA 183
+ +C S +R R R + + RRR + S RS S+ S +H+
Sbjct: 1189 SRSRCKSKSFSRSRSRSPSR---SRNRRRRNSRSKSYSRSHSRSRSRSNSHS 1237
Score = 38 (18.4 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 129 PNLTEEKCDSPQDTRKRRRRSASLVLQKKRRR 160
P T+ K D + RK+ + +K++RR
Sbjct: 1587 PKKTKRKRDKSKKKRKQHQLEKPRKEKKRKRR 1618
Score = 38 (18.4 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 102 LCPKCSGQRRVRSFSQRKIIDFFKIKKPNLTEEKCDSPQ 140
L PK + ++R +S +RK K +K + + +P+
Sbjct: 1585 LTPKKTKRKRDKSKKKRKQHQLEKPRKEKKRKRRTQTPE 1623
Score = 37 (18.1 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 125 KIKKPNLTEEKCDSPQDTRKRRRRS 149
K KK + + + P+ +KR+RR+
Sbjct: 1596 KSKKKR-KQHQLEKPRKEKKRKRRT 1619
Score = 37 (18.1 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 155 QKKRRRLLPFTPSEDRSQRLSQMGSLAHAL 184
+++RRR + SE +RLS LA +
Sbjct: 435 RRRRRRGVATASSEGPGRRLSASKRLAEQM 464
>ZFIN|ZDB-GENE-041014-190 [details] [associations]
symbol:dpf3 "D4, zinc and double PHD fingers,
family 3" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0042393 "histone binding" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;IMP] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0048644 "muscle organ morphogenesis" evidence=IMP] [GO:0016568
"chromatin modification" evidence=IEA;ISS] [GO:0055008 "cardiac
muscle tissue morphogenesis" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028
PROSITE:PS50016 PROSITE:PS50157 SMART:SM00184 SMART:SM00249
ZFIN:ZDB-GENE-041014-190 GO:GO:0007399 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016514
GO:GO:0055008 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0042393
HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 GeneTree:ENSGT00530000063194 CTD:8110
EMBL:EU245032 EMBL:BX255881 IPI:IPI00488271 RefSeq:NP_001104639.1
UniGene:Dr.81131 ProteinModelPortal:A9LMC0 STRING:A9LMC0
Ensembl:ENSDART00000123387 GeneID:562738 KEGG:dre:562738
InParanoid:Q5RIJ2 OMA:AEVEPRS OrthoDB:EOG49KFR1 NextBio:20884558
Bgee:A9LMC0 Uniprot:A9LMC0
Length = 391
Score = 142 (55.0 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ E ++LL CD CD+G+HM CL+P + + P G+W C C
Sbjct: 333 CSLCGTSENDDQLLFCDDCDRGYHMYCLKPPMTQPPEGSWSCHLC 377
>UNIPROTKB|F1MLK1 [details] [associations]
symbol:RSF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050434 "positive regulation of viral transcription"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043392 "negative
regulation of DNA binding" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0031213 "RSF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0045892 GO:GO:0045893
GO:GO:0046872 GO:GO:0008270 GO:GO:0006352 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016584
GO:GO:0006334 GO:GO:0050434 GO:GO:0043392 GO:GO:0031213 OMA:QPRVLPS
EMBL:DAAA02062726 EMBL:DAAA02062727 IPI:IPI00924309
Ensembl:ENSBTAT00000061202 GeneTree:ENSGT00530000064411
Uniprot:F1MLK1
Length = 1355
Score = 148 (57.2 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
D C++CG E +LLCD CD G+H CLRP ++ +P G W CP C
Sbjct: 807 DEPCKKCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPC 854
Score = 46 (21.3 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 32/126 (25%), Positives = 55/126 (43%)
Query: 122 DFFKIKKPNLTEEKCDSPQ----DT---RKRRRRSASLVLQKKRRRLLPFTPSEDRSQRL 174
D F + N E + D P DT +R RR S +++ RR L TP S
Sbjct: 1033 DEFVVSDENPDESEEDPPSNDDSDTDFCSRRLRRHPSRPMRQSRR-LRRKTPKRKCSDDD 1091
Query: 175 SQMGSLAHALTALQMEFSDDLT--YMPGMAPRSANQAEFEEGGMQVLSKEDTETLEQCRA 232
+ S ++ + + +FSDD + ++ RS + Q+ KED+E+ + +
Sbjct: 1092 EEEESEENSRDS-ESDFSDDFSDDFVETRRRRSRRNQK-----RQINYKEDSES-DGSQK 1144
Query: 233 MCKRGE 238
+RG+
Sbjct: 1145 SLRRGK 1150
Score = 43 (20.2 bits), Expect = 6.7e-07, Sum P(3) = 6.7e-07
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 137 DSPQDTRKRRRRSASLVLQKKRRRL 161
D + KR +R+A+ +KKRRRL
Sbjct: 984 DEERKENKRPQRAAA-ARRKKRRRL 1007
Score = 41 (19.5 bits), Expect = 6.7e-07, Sum P(3) = 6.7e-07
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 204 RSANQAEFEEGGMQVLSKEDTETLEQCRAMCKRG 237
R + ++ EE M S++D E R++ KRG
Sbjct: 1158 RRLSSSDSEESYMSKNSEDDELAKESKRSVRKRG 1191
>UNIPROTKB|E9PSM3 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005737 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 IPI:IPI00365351
Ensembl:ENSRNOT00000034548 NextBio:665124 ArrayExpress:E9PSM3
Uniprot:E9PSM3
Length = 1690
Score = 136 (52.9 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 23/45 (51%), Positives = 27/45 (60%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG G ++LLLCD CD +H CL P + VP G W CPKC
Sbjct: 296 CMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGDWRCPKC 340
Score = 61 (26.5 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 44/193 (22%), Positives = 77/193 (39%)
Query: 90 RPIVVRVPIGTWLCPKCSGQ-RRVRSFSQRKIIDFFKIKKPNLTEEKCDSPQD------T 142
RPI VR+ P+ Q R++ +R F K K + T + SP+ +
Sbjct: 1031 RPIPVRLDA----LPQVESQVAAARAWRERTGRTFLK-KNSSHTLLQVLSPRTDIGVYGS 1085
Query: 143 RKRRRRSASLVLQKKRRRLLPFTPSEDRSQRLSQMGSLAHALTALQMEFSDDLTYMPGMA 202
K RR+ +++K++ + L P D + L + A + + ++ M +
Sbjct: 1086 GKNRRKKVKEIIEKEKEKDLDLEPLSDLEEGLEETRDAAMVVAVFKEREQKEIEAMHSL- 1144
Query: 203 PRSANQAEF------EEGGMQVLSKEDTETLEQCRAMCK---RGECPPLVVVYDSCEGFT 253
R+AN A+ EE + K + + QC +CK C PL +G
Sbjct: 1145 -RAANLAKMTIVDRIEEVKFCICRKTASGFMLQCE-LCKDWFHNGCVPLPKSGSQKKG-- 1200
Query: 254 VEADGQIKDMTFI 266
+ Q KD+ F+
Sbjct: 1201 --SSWQAKDVKFL 1211
>ZFIN|ZDB-GENE-091204-206 [details] [associations]
symbol:si:dkey-21n12.3 "si:dkey-21n12.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 SMART:SM00384 ZFIN:ZDB-GENE-091204-206 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR018501 PROSITE:PS50827 EMBL:AL929053
GeneTree:ENSGT00530000064411 IPI:IPI00497346
Ensembl:ENSDART00000077161 Bgee:F1Q6Y6 Uniprot:F1Q6Y6
Length = 1369
Score = 146 (56.5 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
D C+ CG E +LLCD CD G+H CLRP ++ +P G W CP C
Sbjct: 853 DDPCKHCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPC 900
Score = 48 (22.0 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 32/147 (21%), Positives = 56/147 (38%)
Query: 127 KKPNLTEEKCDSPQDTRKRRRRSASLVLQKKRRRLLPFTPSEDRSQRLSQMGSLAHALTA 186
+KP +++RKRRRR SL K+RR +D + + + +
Sbjct: 1227 RKPKKIRADSSEEEESRKRRRR-LSL---KRRRESEDDDDDDDSDESEEEERPVRKRVNR 1282
Query: 187 LQMEFSDDLTYMPGMAPRSANQAE--FEEGGMQVLSKEDTETLEQCRAMCKRGECPPLVV 244
+ SD+ + G +P + N AE G + E A K G P +
Sbjct: 1283 ID---SDE-SASKGPSPINDNTAEPPSTNGQSPIKGLEGVAPRPGAGATPKNGNTPSIAP 1338
Query: 245 VYDSCE-GFTVEADGQIKDMTFIAEYI 270
+ E G E + + +T + +Y+
Sbjct: 1339 --NGLEAGAQEEDEDDLLGVTDLVDYV 1363
>UNIPROTKB|I3LNG0 [details] [associations]
symbol:I3LNG0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001965 InterPro:IPR007087
InterPro:IPR015880 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028
PROSITE:PS50016 PROSITE:PS50157 SMART:SM00249 SMART:SM00355
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
GeneTree:ENSGT00530000063194 Ensembl:ENSSSCT00000027540
Uniprot:I3LNG0
Length = 314
Score = 139 (54.0 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ E ++LL CD CD+G+HM CL P V P G+W C C
Sbjct: 255 CILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLC 299
>UNIPROTKB|E1BN25 [details] [associations]
symbol:BAZ1A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008623 "CHRAC" evidence=IEA] [GO:0006261
"DNA-dependent DNA replication" evidence=IEA] [GO:0000228 "nuclear
chromosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0008270
GO:GO:0006261 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000228 OMA:SSFQNNV GO:GO:0008623
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 EMBL:DAAA02052733 EMBL:DAAA02052734
IPI:IPI00713138 Ensembl:ENSBTAT00000026857 Uniprot:E1BN25
Length = 1427
Score = 147 (56.8 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
C+ C AE ++LCD CD+G H C+RP + VP G W CP+C ++R R S R+
Sbjct: 1021 CKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVPEGDWFCPECRPKQRSRRLSSRQ 1078
>UNIPROTKB|F1STY8 [details] [associations]
symbol:RSF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050434 "positive regulation of viral transcription"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043392 "negative
regulation of DNA binding" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0031213 "RSF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0045892 GO:GO:0045893
GO:GO:0046872 GO:GO:0008270 GO:GO:0006352 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016584
GO:GO:0006334 GO:GO:0050434 GO:GO:0043392 GO:GO:0031213 OMA:QPRVLPS
GeneTree:ENSGT00530000064411 EMBL:CU633553 EMBL:CU915366
Ensembl:ENSSSCT00000016236 Uniprot:F1STY8
Length = 1344
Score = 148 (57.2 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
D C++CG E +LLCD CD G+H CLRP ++ +P G W CP C
Sbjct: 795 DEPCKKCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPC 842
Score = 43 (20.2 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 137 DSPQDTRKRRRRSASLVLQKKRRRL 161
D + KR +R+A+ +KKRRRL
Sbjct: 972 DEERKENKRPQRAAA-ARRKKRRRL 995
Score = 40 (19.1 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 204 RSANQAEFEEGGMQVLSKEDTETLEQCRAMCKRG 237
R + +E EE M S++D + R++ KRG
Sbjct: 1146 RRLSSSESEESYMSKNSEDDELAKKSKRSVRKRG 1179
>UNIPROTKB|Q96T23 [details] [associations]
symbol:RSF1 "Remodeling and spacing factor 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0050434
"positive regulation of viral transcription" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0006334 "nucleosome assembly" evidence=IDA;TAS]
[GO:0042393 "histone binding" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0043392 "negative regulation of DNA
binding" evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031213 "RSF
complex" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0045892 Reactome:REACT_115566
GO:GO:0045893 GO:GO:0005654 GO:GO:0046872 GO:GO:0008270
GO:GO:0006352 EMBL:AP000580 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0042393 GO:GO:0034080 GO:GO:0016584
PROSITE:PS50827 GO:GO:0050434 GO:GO:0043392 eggNOG:NOG79337
GO:GO:0031213 EMBL:AF380176 EMBL:AF227948 EMBL:AP000609
EMBL:AP002343 EMBL:AF059317 EMBL:BC046124 EMBL:AK001268
IPI:IPI00290652 IPI:IPI00514411 IPI:IPI00982445 RefSeq:NP_057662.3
UniGene:Hs.420229 ProteinModelPortal:Q96T23 SMR:Q96T23
IntAct:Q96T23 STRING:Q96T23 PhosphoSite:Q96T23 DMDM:251757329
PaxDb:Q96T23 PRIDE:Q96T23 DNASU:51773 Ensembl:ENST00000308488
Ensembl:ENST00000360355 Ensembl:ENST00000480887 GeneID:51773
KEGG:hsa:51773 UCSC:uc001oym.3 CTD:51773 GeneCards:GC11M077371
H-InvDB:HIX0022742 HGNC:HGNC:18118 HPA:CAB022626 MIM:608522
neXtProt:NX_Q96T23 PharmGKB:PA29210 HOGENOM:HOG000154205
HOVERGEN:HBG105728 InParanoid:Q96T23 KO:K11657 OMA:QPRVLPS
OrthoDB:EOG441QBQ PhylomeDB:Q96T23 ChiTaRS:RSF1 GenomeRNAi:51773
NextBio:55899 Bgee:Q96T23 CleanEx:HS_RSF1 Genevestigator:Q96T23
GermOnline:ENSG00000048649 Uniprot:Q96T23
Length = 1441
Score = 148 (57.2 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
D C++CG E +LLCD CD G+H CLRP ++ +P G W CP C
Sbjct: 891 DEPCKKCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPC 938
Score = 43 (20.2 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 137 DSPQDTRKRRRRSASLVLQKKRRRL 161
D + KR +R+A+ +KKRRRL
Sbjct: 1068 DEERKENKRPQRAAA-ARRKKRRRL 1091
Score = 41 (19.5 bits), Expect = 8.2e-07, Sum P(3) = 8.2e-07
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 204 RSANQAEFEEGGMQVLSKEDTETLEQCRAMCKRG 237
R + +E EE + S++D E R++ KRG
Sbjct: 1242 RRLSSSESEESYLSKNSEDDELAKESKRSVRKRG 1275
>RGD|1306199 [details] [associations]
symbol:Baz1a "bromodomain adjacent to zinc finger domain, 1A"
species:10116 "Rattus norvegicus" [GO:0000228 "nuclear chromosome"
evidence=ISO] [GO:0006261 "DNA-dependent DNA replication"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008623 "CHRAC" evidence=ISO] InterPro:IPR001841
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00297
RGD:1306199 GO:GO:0046872 GO:GO:0008270 GO:GO:0006261
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000228 GO:GO:0008623 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 InterPro:IPR013136
Pfam:PF02791 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 IPI:IPI00959691
Ensembl:ENSRNOT00000009080 Uniprot:F1M4U9
Length = 1516
Score = 147 (56.8 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
C+ C AE ++LCD CD+G H C+RP + VP G W CP+C ++R R S R+
Sbjct: 1111 CKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVPDGDWFCPECRPKQRSRRLSSRQ 1168
>UNIPROTKB|E2RE69 [details] [associations]
symbol:BAZ1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537 SMART:SM00571
PROSITE:PS50827 PROSITE:PS51136 GeneTree:ENSGT00660000095335
EMBL:AAEX03005669 EMBL:AAEX03005670 Ensembl:ENSCAFT00000021125
NextBio:20855328 Uniprot:E2RE69
Length = 1525
Score = 147 (56.8 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
C+ C AE ++LCD CD+G H C+RP + VP G W CP+C ++R R S R+
Sbjct: 1119 CKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVPEGDWFCPECRPKQRSRRLSSRQ 1176
>UNIPROTKB|Q9NRL2 [details] [associations]
symbol:BAZ1A "Bromodomain adjacent to zinc finger domain
protein 1A" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008623 "CHRAC" evidence=IDA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0016590 "ACF complex" evidence=TAS] [GO:0004402
"histone acetyltransferase activity" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0006351 "transcription, DNA-dependent" evidence=NAS]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0006261 GO:GO:0006338 EMBL:CH471078
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 GO:GO:0000228 EMBL:AF213467 EMBL:AF221130
EMBL:AB032252 EMBL:AL121603 EMBL:AL355885 EMBL:AF161435
EMBL:AL050089 IPI:IPI00383565 IPI:IPI00412415 PIR:T08738
RefSeq:NP_038476.2 RefSeq:NP_872589.1 UniGene:Hs.509140
ProteinModelPortal:Q9NRL2 SMR:Q9NRL2 IntAct:Q9NRL2
MINT:MINT-1183777 STRING:Q9NRL2 PhosphoSite:Q9NRL2 DMDM:116241266
PaxDb:Q9NRL2 PRIDE:Q9NRL2 Ensembl:ENST00000358716
Ensembl:ENST00000360310 Ensembl:ENST00000382422 GeneID:11177
KEGG:hsa:11177 UCSC:uc001wsk.3 UCSC:uc001wsl.3 CTD:11177
GeneCards:GC14M035221 H-InvDB:HIX0037904 HGNC:HGNC:960
HPA:HPA002730 MIM:605680 neXtProt:NX_Q9NRL2 PharmGKB:PA25270
HOGENOM:HOG000095179 HOVERGEN:HBG080889 InParanoid:Q9NRL2 KO:K11655
OMA:SSFQNNV OrthoDB:EOG49GKFR PhylomeDB:Q9NRL2 ChiTaRS:BAZ1A
GenomeRNAi:11177 NextBio:42529 ArrayExpress:Q9NRL2 Bgee:Q9NRL2
CleanEx:HS_BAZ1A Genevestigator:Q9NRL2 GermOnline:ENSG00000198604
GO:GO:0016590 GO:GO:0008623 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537
SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136 Uniprot:Q9NRL2
Length = 1556
Score = 147 (56.8 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
C+ C AE ++LCD CD+G H C+RP + VP G W CP+C ++R R S R+
Sbjct: 1151 CKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVPEGDWFCPECRPKQRSRRLSSRQ 1208
>UNIPROTKB|J9P748 [details] [associations]
symbol:BAZ1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 CTD:11177
KO:K11655 OMA:SSFQNNV InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537
SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136
GeneTree:ENSGT00660000095335 EMBL:AAEX03005669 EMBL:AAEX03005670
RefSeq:XP_537409.2 Ensembl:ENSCAFT00000046060 GeneID:480287
KEGG:cfa:480287 Uniprot:J9P748
Length = 1557
Score = 147 (56.8 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
C+ C AE ++LCD CD+G H C+RP + VP G W CP+C ++R R S R+
Sbjct: 1151 CKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVPEGDWFCPECRPKQRSRRLSSRQ 1208
>UNIPROTKB|F1SHI5 [details] [associations]
symbol:BAZ1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008623 "CHRAC" evidence=IEA] [GO:0006261
"DNA-dependent DNA replication" evidence=IEA] [GO:0000228 "nuclear
chromosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0008270
GO:GO:0006261 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000228 CTD:11177 KO:K11655 OMA:SSFQNNV
GO:GO:0008623 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537
SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136
GeneTree:ENSGT00660000095335 EMBL:CT842119 EMBL:CU469145
RefSeq:NP_001231088.1 UniGene:Ssc.6274 Ensembl:ENSSSCT00000002190
GeneID:100151954 KEGG:ssc:100151954 ArrayExpress:F1SHI5
Uniprot:F1SHI5
Length = 1557
Score = 147 (56.8 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
C+ C AE ++LCD CD+G H C+RP + VP G W CP+C ++R R S R+
Sbjct: 1151 CKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVPEGDWFCPECRPKQRSRRLSSRQ 1208
>RGD|1309052 [details] [associations]
symbol:Dpf3 "D4, zinc and double PHD fingers, family 3"
species:10116 "Rattus norvegicus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=ISO] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
RGD:1309052 GO:GO:0007399 GO:GO:0046872 GO:GO:0008270 GO:GO:0071565
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051 OrthoDB:EOG4T4CX1
IPI:IPI00958271 Ensembl:ENSRNOT00000010703 UCSC:RGD:1309052
ArrayExpress:D3ZMB5 Uniprot:D3ZMB5
Length = 369
Score = 139 (54.0 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ E ++LL CD CD+G+HM CL P V P G+W C C
Sbjct: 310 CILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLC 354
>UNIPROTKB|F1N0V2 [details] [associations]
symbol:DPF3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00184 SMART:SM00249 SMART:SM00355 GO:GO:0007399
GO:GO:0046872 GO:GO:0008270 GO:GO:0071565 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR025750 Pfam:PF14051 GeneTree:ENSGT00530000063194
OMA:TNMTEAV EMBL:DAAA02029576 EMBL:DAAA02029577 EMBL:DAAA02029578
EMBL:DAAA02029579 IPI:IPI00699040 Ensembl:ENSBTAT00000035798
Uniprot:F1N0V2
Length = 378
Score = 139 (54.0 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ E ++LL CD CD+G+HM CL P V P G+W C C
Sbjct: 319 CILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLC 363
>UNIPROTKB|Q92784 [details] [associations]
symbol:DPF3 "Zinc finger protein DPF3" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0005634
"nucleus" evidence=NAS] [GO:0008270 "zinc ion binding"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0071565 "nBAF complex" evidence=ISS] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0007399 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0071565 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051
eggNOG:NOG271547 HOGENOM:HOG000217918 OrthoDB:EOG4T4CX1 CTD:8110
EMBL:AY803021 EMBL:AK024141 EMBL:AK126933 EMBL:AC004828
EMBL:AC006360 EMBL:AL392024 EMBL:BC060801 EMBL:U43919
IPI:IPI00425378 IPI:IPI00915028 IPI:IPI00915029 IPI:IPI01012933
RefSeq:NP_036206.3 UniGene:Hs.162868 PDB:2KWJ PDB:2KWK PDB:2KWN
PDB:2KWO PDBsum:2KWJ PDBsum:2KWK PDBsum:2KWN PDBsum:2KWO
ProteinModelPortal:Q92784 SMR:Q92784 DIP:DIP-59245N STRING:Q92784
PhosphoSite:Q92784 DMDM:215274167 PRIDE:Q92784 DNASU:8110
Ensembl:ENST00000381216 Ensembl:ENST00000541685
Ensembl:ENST00000556509 GeneID:8110 KEGG:hsa:8110 UCSC:uc001xnc.2
UCSC:uc010ari.1 GeneCards:GC14M073086 HGNC:HGNC:17427 MIM:601672
neXtProt:NX_Q92784 PharmGKB:PA134888535 OMA:TNMTEAV
EvolutionaryTrace:Q92784 GenomeRNAi:8110 NextBio:30759
ArrayExpress:Q92784 Bgee:Q92784 CleanEx:HS_DPF3
Genevestigator:Q92784 GermOnline:ENSG00000205683 Uniprot:Q92784
Length = 378
Score = 139 (54.0 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ E ++LL CD CD+G+HM CL P V P G+W C C
Sbjct: 319 CILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLC 363
>MGI|MGI:1917377 [details] [associations]
symbol:Dpf3 "D4, zinc and double PHD fingers, family 3"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IDA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00184 SMART:SM00249 SMART:SM00355 MGI:MGI:1917377
GO:GO:0007399 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0071565 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051
eggNOG:NOG271547 HOGENOM:HOG000217918 GeneTree:ENSGT00530000063194
CTD:8110 OMA:TNMTEAV EMBL:AF362750 EMBL:AK039011 EMBL:BC048572
IPI:IPI00117604 IPI:IPI00406793 IPI:IPI00915037 IPI:IPI00915048
RefSeq:NP_001254554.1 RefSeq:NP_478119.1 UniGene:Mm.151308
UniGene:Mm.403230 ProteinModelPortal:P58269 SMR:P58269
STRING:P58269 PhosphoSite:P58269 PaxDb:P58269 PRIDE:P58269
Ensembl:ENSMUST00000177801 Ensembl:ENSMUST00000177959
Ensembl:ENSMUST00000178756 GeneID:70127 KEGG:mmu:70127
UCSC:uc007odc.1 UCSC:uc007odd.1 InParanoid:Q8CAD8 ChiTaRS:DPF3
NextBio:331050 Bgee:P58269 CleanEx:MM_DPF3 Genevestigator:P58269
Uniprot:P58269
Length = 378
Score = 139 (54.0 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ E ++LL CD CD+G+HM CL P V P G+W C C
Sbjct: 319 CILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLC 363
>RGD|1565602 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA;ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IEA;ISO] [GO:0034720 "histone
H3-K4 demethylation" evidence=ISO] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
RGD:1565602 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 GO:GO:0034647
OrthoDB:EOG4HT8RC IPI:IPI00554242 Ensembl:ENSRNOT00000006290
UCSC:RGD:1565602 Uniprot:D3ZUT4
Length = 1546
Score = 140 (54.3 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 25/48 (52%), Positives = 28/48 (58%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
C CGSG + LLLCD CD +H CL P + VP G W CPKC Q
Sbjct: 314 CLLCGSGNDEDRLLLCDGCDDSYHTFCLLPPLHDVPKGDWRCPKCLAQ 361
Score = 53 (23.7 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 26/95 (27%), Positives = 45/95 (47%)
Query: 152 LVLQKKRRRLLPFTPS-EDRSQRLSQMGSLAHALTALQMEFSDDLTYMPG-MAPRSANQA 209
L L++K+R+L PS + RS +L + L ALT + S T + A Q+
Sbjct: 1101 LGLKRKQRKLKDPLPSGKKRSTKLESLSDLERALTESKETASAMATLGEARLREMEALQS 1160
Query: 210 EFEEGGMQVLSK-EDTETLEQCRAMCKRGECPPLV 243
++LS +D ET + C +C++ P++
Sbjct: 1161 LRFANEEKLLSPAQDVET-KVC--LCQKTPATPMI 1192
Score = 37 (18.1 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 35/147 (23%), Positives = 52/147 (35%)
Query: 102 LCPKCS-GQRRVRSFSQRKIIDFFKIKKPNLTEEKCDSPQD-----TRKRRRRSASLVLQ 155
LCP+C G ++ QRK+ D K T K +S D T + SA L
Sbjct: 1092 LCPRCDIGLLGLKR-KQRKLKDPLPSGKKRST--KLESLSDLERALTESKETASAMATLG 1148
Query: 156 KKRRRLLPFTPSEDRSQRLSQMGSLAHALTALQMEFSDDLTYMPGMAPRSANQAEFEEGG 215
+ R R + S + + T + + T P + A F
Sbjct: 1149 EARLREMEALQSLRFANEEKLLSPAQDVETKVCLCQKTPAT--PMIQCELCRDA-FHTSC 1205
Query: 216 MQVLSKEDTETLEQCRAMCKRGECPPL 242
+ V S + + C C+R E PPL
Sbjct: 1206 VAVSSISQSSRIWLC-PHCRRSEKPPL 1231
>UNIPROTKB|F5H1F7 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A IPI:IPI01018722
ProteinModelPortal:F5H1F7 SMR:F5H1F7 Ensembl:ENST00000382815
ArrayExpress:F5H1F7 Bgee:F5H1F7 Uniprot:F5H1F7
Length = 1636
Score = 135 (52.6 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 23/45 (51%), Positives = 27/45 (60%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG G ++LLLCD CD +H CL P + VP G W CPKC
Sbjct: 296 CMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKC 340
Score = 59 (25.8 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 39/169 (23%), Positives = 68/169 (40%)
Query: 90 RPIVVRVPIGTWLCPKCSGQ-RRVRSFSQRKIIDFFKIKKPNLTEEKCDSPQD------T 142
RPI VR+ P+ Q R++ +R F K K + T + SP+ +
Sbjct: 1031 RPIPVRLEA----LPQVESQVAAARAWRERTGRTFLK-KNSSHTLLQVLSPRTDIGVYGS 1085
Query: 143 RKRRRRSASLVLQKKRRRLLPFTPSEDRSQRLSQMGSLAHALTALQMEFSDDLTYMPGMA 202
K RR+ +++K++ + L P D + L + A + + ++ M +
Sbjct: 1086 GKNRRKKVKELIEKEKEKDLDLEPLSDLEEGLEETRDTAMVVAVFKEREQKEIEAMHSL- 1144
Query: 203 PRSANQAEF------EEGGMQVLSKEDTETLEQCRAMCK---RGECPPL 242
R+AN A+ EE + K + + QC +CK C PL
Sbjct: 1145 -RAANLAKMTMVDRIEEVKFCICRKTASGFMLQCE-LCKDWFHNSCVPL 1191
>UNIPROTKB|F1Q4J4 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927 OMA:ECSKPRE
EMBL:AAEX03015319 EMBL:AAEX03015320 RefSeq:XP_854690.3
Ensembl:ENSCAFT00000025008 GeneID:477727 KEGG:cfa:477727
Uniprot:F1Q4J4
Length = 1688
Score = 135 (52.6 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 23/45 (51%), Positives = 27/45 (60%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG G ++LLLCD CD +H CL P + VP G W CPKC
Sbjct: 296 CMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKC 340
Score = 59 (25.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 39/169 (23%), Positives = 68/169 (40%)
Query: 90 RPIVVRVPIGTWLCPKCSGQ-RRVRSFSQRKIIDFFKIKKPNLTEEKCDSPQD------T 142
RPI VR+ P+ Q R++ +R F K K + T + SP+ +
Sbjct: 1029 RPIPVRLDA----LPQVESQVAAARAWRERTGRTFLK-KNSSHTLLQVLSPRTDIGIYGS 1083
Query: 143 RKRRRRSASLVLQKKRRRLLPFTPSEDRSQRLSQMGSLAHALTALQMEFSDDLTYMPGMA 202
K RR+ +++K++ + L P D + L + A + + ++ M +
Sbjct: 1084 GKNRRKKVKELIEKEKEKDLDLEPLSDLEEGLEETRDTAMVVAVFKEREQKEIEAMHSL- 1142
Query: 203 PRSANQAEF------EEGGMQVLSKEDTETLEQCRAMCK---RGECPPL 242
R+AN A+ EE + K + + QC +CK C PL
Sbjct: 1143 -RAANLAKMTMVDRIEEVKFCICRKTASGFMLQCE-LCKDWFHNSCVPL 1189
>UNIPROTKB|P29375 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0003682 GO:GO:0016568 GO:GO:0006366
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 eggNOG:NOG327026 KO:K11446 EMBL:S66431 EMBL:AB209999
EMBL:BC048307 EMBL:BC053893 EMBL:BC110916 IPI:IPI00021363
IPI:IPI01014284 PIR:I78879 RefSeq:NP_001036068.1 UniGene:Hs.76272
PDB:2JXJ PDB:2KGG PDB:2KGI PDB:3GL6 PDBsum:2JXJ PDBsum:2KGG
PDBsum:2KGI PDBsum:3GL6 ProteinModelPortal:P29375 SMR:P29375
DIP:DIP-472N IntAct:P29375 STRING:P29375 PhosphoSite:P29375
DMDM:215274124 PaxDb:P29375 PRIDE:P29375 Ensembl:ENST00000399788
GeneID:5927 KEGG:hsa:5927 UCSC:uc001qif.1 CTD:5927
GeneCards:GC12M000389 H-InvDB:HIX0010308 HGNC:HGNC:9886
HPA:HPA006201 MIM:180202 neXtProt:NX_P29375 PharmGKB:PA34250
HOGENOM:HOG000290719 OMA:ECSKPRE OrthoDB:EOG4GB758 ChiTaRS:KDM5A
EvolutionaryTrace:P29375 GenomeRNAi:5927 NextBio:23088
ArrayExpress:P29375 Bgee:P29375 CleanEx:HS_JARID1A CleanEx:HS_RBP2
Genevestigator:P29375 GermOnline:ENSG00000073614 Uniprot:P29375
Length = 1690
Score = 135 (52.6 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 23/45 (51%), Positives = 27/45 (60%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG G ++LLLCD CD +H CL P + VP G W CPKC
Sbjct: 296 CMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKC 340
Score = 59 (25.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 39/169 (23%), Positives = 68/169 (40%)
Query: 90 RPIVVRVPIGTWLCPKCSGQ-RRVRSFSQRKIIDFFKIKKPNLTEEKCDSPQD------T 142
RPI VR+ P+ Q R++ +R F K K + T + SP+ +
Sbjct: 1031 RPIPVRLEA----LPQVESQVAAARAWRERTGRTFLK-KNSSHTLLQVLSPRTDIGVYGS 1085
Query: 143 RKRRRRSASLVLQKKRRRLLPFTPSEDRSQRLSQMGSLAHALTALQMEFSDDLTYMPGMA 202
K RR+ +++K++ + L P D + L + A + + ++ M +
Sbjct: 1086 GKNRRKKVKELIEKEKEKDLDLEPLSDLEEGLEETRDTAMVVAVFKEREQKEIEAMHSL- 1144
Query: 203 PRSANQAEF------EEGGMQVLSKEDTETLEQCRAMCK---RGECPPL 242
R+AN A+ EE + K + + QC +CK C PL
Sbjct: 1145 -RAANLAKMTMVDRIEEVKFCICRKTASGFMLQCE-LCKDWFHNSCVPL 1191
>UNIPROTKB|F1MWC1 [details] [associations]
symbol:DPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
Gene3D:3.30.160.60 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 EMBL:DAAA02046989 EMBL:DAAA02046990
EMBL:DAAA02046991 EMBL:DAAA02046992 IPI:IPI01024694
Ensembl:ENSBTAT00000009493 ArrayExpress:F1MWC1 Uniprot:F1MWC1
Length = 387
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ E ++LL CD CD+G+HM CL P + P G+W C C
Sbjct: 328 CSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLC 372
>MGI|MGI:1352748 [details] [associations]
symbol:Dpf1 "D4, zinc and double PHD fingers family 1"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=ISO;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IDA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
MGI:MGI:1352748 GO:GO:0005737 GO:GO:0007399 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0003676
Gene3D:3.30.160.60 GO:GO:0071565 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 CTD:8193 HOVERGEN:HBG004475 InterPro:IPR025750
Pfam:PF14051 eggNOG:NOG271547 HOGENOM:HOG000217918
OrthoDB:EOG4T4CX1 EMBL:U48238 EMBL:U48239 EMBL:AF108133
IPI:IPI00134511 IPI:IPI00227453 IPI:IPI00227454 RefSeq:NP_038902.1
UniGene:Mm.101885 UniGene:Mm.453136 UniGene:Mm.453137
ProteinModelPortal:Q9QX66 SMR:Q9QX66 STRING:Q9QX66
PhosphoSite:Q9QX66 PRIDE:Q9QX66 Ensembl:ENSMUST00000049977
Ensembl:ENSMUST00000065181 GeneID:29861 KEGG:mmu:29861
GeneTree:ENSGT00530000063194 NextBio:307066 Bgee:Q9QX66
CleanEx:MM_DPF1 Genevestigator:Q9QX66 GermOnline:ENSMUSG00000030584
Uniprot:Q9QX66
Length = 387
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ E ++LL CD CD+G+HM CL P + P G+W C C
Sbjct: 328 CSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLC 372
>UNIPROTKB|F1MED1 [details] [associations]
symbol:DPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0007399 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.160.60 GO:GO:0071565 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR025750 Pfam:PF14051 OMA:HAPGQLY
GeneTree:ENSGT00530000063194 EMBL:DAAA02046989 EMBL:DAAA02046990
EMBL:DAAA02046991 EMBL:DAAA02046992 IPI:IPI01024694
Ensembl:ENSBTAT00000054713 ArrayExpress:F1MED1 Uniprot:F1MED1
Length = 388
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ E ++LL CD CD+G+HM CL P + P G+W C C
Sbjct: 329 CSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLC 373
>UNIPROTKB|J3KQY6 [details] [associations]
symbol:DPF1 "Zinc finger protein neuro-d4" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
Gene3D:3.30.160.60 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
EMBL:AC011479 HGNC:HGNC:20225 ProteinModelPortal:J3KQY6
Ensembl:ENST00000456296 Uniprot:J3KQY6
Length = 388
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ E ++LL CD CD+G+HM CL P + P G+W C C
Sbjct: 329 CSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLC 373
>UNIPROTKB|F1MQ59 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019907 "cyclin-dependent protein kinase activating kinase
holoenzyme complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:DAAA02014587
IPI:IPI00715082 Ensembl:ENSBTAT00000027280 Uniprot:F1MQ59
Length = 1693
Score = 135 (52.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 23/45 (51%), Positives = 27/45 (60%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG G ++LLLCD CD +H CL P + VP G W CPKC
Sbjct: 296 CMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKC 340
Score = 58 (25.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 39/169 (23%), Positives = 68/169 (40%)
Query: 90 RPIVVRVPIGTWLCPKCSGQ-RRVRSFSQRKIIDFFKIKKPNLTEEKCDSPQD------T 142
RPI VR+ P+ Q R++ +R F K K + T + SP+ +
Sbjct: 1032 RPIPVRLDA----LPQVESQVAAARAWRERTGRTFLK-KNSSHTLLQVLSPRTDIGIYGS 1086
Query: 143 RKRRRRSASLVLQKKRRRLLPFTPSEDRSQRLSQMGSLAHALTALQMEFSDDLTYMPGMA 202
K RR+ +++K++ + L P D + L + A + + +L M +
Sbjct: 1087 GKNRRKKVKELIEKEKEKDLDLEPLSDLEEGLEETRDAATVVAVFKEREQKELEAMHSL- 1145
Query: 203 PRSANQAEF------EEGGMQVLSKEDTETLEQCRAMCK---RGECPPL 242
R+AN A+ E+ + K + + QC +CK C PL
Sbjct: 1146 -RAANLAKMSMVDRIEDVKFCICRKTASGFMLQCE-LCKDWFHNSCVPL 1192
>UNIPROTKB|E1BS85 [details] [associations]
symbol:E1BS85 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000786 "nucleosome" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016747 "transferase activity, transferring acyl
groups other than amino-acyl groups" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001965 InterPro:IPR002717
InterPro:IPR005818 InterPro:IPR019787 Pfam:PF00538 Pfam:PF00628
Pfam:PF01853 PROSITE:PS50016 PROSITE:PS51504 SMART:SM00249
SMART:SM00526 GO:GO:0045892 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0006334 GO:GO:0000786 GO:GO:0070776
GO:GO:0043966 GO:GO:0004402 GeneTree:ENSGT00550000074503
EMBL:AADN02027871 EMBL:AADN02027872 EMBL:AADN02027873
EMBL:AADN02027874 IPI:IPI00582485 Ensembl:ENSGALT00000008074
OMA:DERICNI Uniprot:E1BS85
Length = 813
Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 62 CEQCG-SGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
C C G+ A+ +L CD CD+GFHM+C P + R+P G W+C C +++ R K
Sbjct: 272 CSACRIQGKNADNMLFCDSCDRGFHMECCDPPLSRMPKGMWICQVCRPKKKGRKLLHEK 330
>UNIPROTKB|I3L6G5 [details] [associations]
symbol:DPF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0007399 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.160.60 GO:GO:0071565 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR025750 Pfam:PF14051 OMA:HAPGQLY
GeneTree:ENSGT00530000063194 EMBL:FP565378
Ensembl:ENSSSCT00000025066 Uniprot:I3L6G5
Length = 417
Score = 138 (53.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ E ++LL CD CD+G+HM CL P + P G+W C C
Sbjct: 358 CSLCGTSENDDQLLFCDDCDRGYHMYCLSPPMAEPPEGSWSCHLC 402
>ASPGD|ASPL0000010243 [details] [associations]
symbol:AN8211 species:162425 "Emericella nidulans"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0048189 "Lid2 complex"
evidence=IEA] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=IEA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IEA] [GO:0034630
"RITS complex localization" evidence=IEA] [GO:0031507
"heterochromatin assembly" evidence=IEA] [GO:0051572 "negative
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 EMBL:BN001302 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 OrthoDB:EOG44N21B KO:K11446
EMBL:AACD01000143 RefSeq:XP_681480.1 ProteinModelPortal:Q5AU19
EnsemblFungi:CADANIAT00004258 GeneID:2869040 KEGG:ani:AN8211.2
HOGENOM:HOG000160061 OMA:HFGATKT Uniprot:Q5AU19
Length = 1717
Score = 145 (56.1 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 41/140 (29%), Positives = 66/140 (47%)
Query: 57 YGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFS 116
+GD CE CG E +L+CD CD+GFH CL P + +P W CPKC F
Sbjct: 453 FGDK-CETCGKSEDRSSILVCDSCDQGFHRYCLDPPLHHIPEFDWHCPKCLVGTGEFGFE 511
Query: 117 QRKIIDFFKIKKPNLTEEKCDSPQDTRKRRRRSASLVLQKKRRRLLPFTPSEDRSQRLSQ 176
+ + + +K+ +EK ++ + + VL +RR SED +R +
Sbjct: 512 EGGV---YSLKQ---FQEKANNFKKNYFASKMPFDPVLNTRRRE------SEDDVER--E 557
Query: 177 MGSLAHALT-ALQMEFSDDL 195
L +LT +++E+ D+
Sbjct: 558 FWRLVESLTETVEVEYGADI 577
>MGI|MGI:109529 [details] [associations]
symbol:Dpf2 "D4, zinc and double PHD fingers family 2"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00184 SMART:SM00249 SMART:SM00355 MGI:MGI:109529
GO:GO:0005634 GO:GO:0005737 GO:GO:0005813 GO:GO:0006915
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 HOVERGEN:HBG004475
InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
GeneTree:ENSGT00530000063194 CTD:5977 KO:K13196 ChiTaRS:DPF2
EMBL:U43921 EMBL:AF108134 EMBL:AK004812 EMBL:AK138047 EMBL:AK144106
EMBL:AK144848 EMBL:AK144954 EMBL:BC007188 EMBL:BC012709 EMBL:U10435
IPI:IPI00117727 RefSeq:NP_035392.1 UniGene:Mm.2651
ProteinModelPortal:Q61103 SMR:Q61103 DIP:DIP-59247N IntAct:Q61103
STRING:Q61103 PhosphoSite:Q61103 PaxDb:Q61103 PRIDE:Q61103
Ensembl:ENSMUST00000136983 GeneID:19708 KEGG:mmu:19708
UCSC:uc008gfw.2 NextBio:297086 Bgee:Q61103 CleanEx:MM_DPF2
Genevestigator:Q61103 GermOnline:ENSMUSG00000024826 Uniprot:Q61103
Length = 391
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ E ++LL CD CD+G+HM CL P + P G+W C C
Sbjct: 330 CNLCGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLC 374
>RGD|1311699 [details] [associations]
symbol:Dpf2 "D4, zinc and double PHD fingers family 2"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR007087
InterPro:IPR015880 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028
PROSITE:PS50016 PROSITE:PS50157 SMART:SM00184 SMART:SM00249
SMART:SM00355 RGD:1311699 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 EMBL:CH473953 CTD:5977 KO:K13196
RefSeq:NP_001101986.1 UniGene:Rn.17281 PRIDE:G3V8U3
Ensembl:ENSRNOT00000028363 GeneID:361711 KEGG:rno:361711
NextBio:677357 Uniprot:G3V8U3
Length = 391
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ E ++LL CD CD+G+HM CL P + P G+W C C
Sbjct: 330 CNLCGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLC 374
>UNIPROTKB|I3LN35 [details] [associations]
symbol:BAZ2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001739 InterPro:IPR001965 InterPro:IPR016177
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01429 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 SUPFAM:SSF54171 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:CU915672
Ensembl:ENSSSCT00000024565 Uniprot:I3LN35
Length = 1929
Score = 145 (56.1 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 25/53 (47%), Positives = 31/53 (58%)
Query: 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRV 112
V C+ C G+ E LLLCD CDKG H C RP + +P G W CP C + R+
Sbjct: 1876 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACIAKVRL 1928
>UNIPROTKB|F1RPS1 [details] [associations]
symbol:BAZ2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001739 InterPro:IPR001965 InterPro:IPR016177
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01429 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00391 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 SUPFAM:SSF54171
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 OMA:DSDDQAD
EMBL:CU915672 Ensembl:ENSSSCT00000017294 Uniprot:F1RPS1
Length = 1988
Score = 145 (56.1 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 25/53 (47%), Positives = 31/53 (58%)
Query: 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRV 112
V C+ C G+ E LLLCD CDKG H C RP + +P G W CP C + R+
Sbjct: 1935 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPACIAKVRL 1987
>FB|FBgn0033015 [details] [associations]
symbol:d4 "d4" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 EMBL:AE013599 GO:GO:0046872 GO:GO:0008270
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 HSSP:Q14839 KO:K13196 UniGene:Dm.487
GeneID:35485 KEGG:dme:Dmel_CG2682 CTD:35485 FlyBase:FBgn0033015
GenomeRNAi:35485 NextBio:793658 EMBL:AY058600 EMBL:AF427473
RefSeq:NP_610163.1 SMR:Q7K3G5 DIP:DIP-18634N IntAct:Q7K3G5
STRING:Q7K3G5 EnsemblMetazoa:FBtr0086082 UCSC:CG2682-RA
InParanoid:Q7K3G5 OMA:SYDKTSS Uniprot:Q7K3G5
Length = 497
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ + ++LL CD CD+G+HM CL P +V P G+W C C
Sbjct: 445 CSICGTSDNDDQLLFCDDCDRGYHMYCLSPPLVTPPEGSWSCKLC 489
>UNIPROTKB|A6QQS0 [details] [associations]
symbol:DPF2 "D4, zinc and double PHD fingers family 2"
species:9913 "Bos taurus" [GO:0005813 "centrosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR007087
InterPro:IPR015880 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028
PROSITE:PS50016 PROSITE:PS50157 SMART:SM00184 SMART:SM00249
SMART:SM00355 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 HOVERGEN:HBG004475
InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 GeneTree:ENSGT00530000063194 CTD:5977
KO:K13196 OrthoDB:EOG41JZD4 OMA:FPPVKSE EMBL:DAAA02063562
EMBL:BC149969 EMBL:BT030730 IPI:IPI00690122 RefSeq:NP_001093826.1
UniGene:Bt.18954 Ensembl:ENSBTAT00000030078 GeneID:513235
KEGG:bta:513235 InParanoid:A6QQS0 NextBio:20870765 Uniprot:A6QQS0
Length = 391
Score = 136 (52.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ E ++LL CD CD+G+HM CL P + P G+W C C
Sbjct: 330 CNICGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLC 374
>UNIPROTKB|E2R3L8 [details] [associations]
symbol:DPF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR025750 Pfam:PF14051 GeneTree:ENSGT00530000063194
CTD:5977 KO:K13196 EMBL:AAEX03011641 RefSeq:XP_866588.1
ProteinModelPortal:E2R3L8 Ensembl:ENSCAFT00000021663 GeneID:483743
KEGG:cfa:483743 Uniprot:E2R3L8
Length = 391
Score = 136 (52.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ E ++LL CD CD+G+HM CL P + P G+W C C
Sbjct: 330 CNICGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLC 374
>UNIPROTKB|Q92785 [details] [associations]
symbol:DPF2 "Zinc finger protein ubi-d4" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=TAS] [GO:0097190
"apoptotic signaling pathway" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR007087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00184 SMART:SM00249 SMART:SM00355 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 GO:GO:0006917 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 EMBL:CH471076 GO:GO:0097190
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359
HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 CTD:5977 KO:K13196 OrthoDB:EOG41JZD4
EMBL:AF001433 EMBL:U94585 EMBL:BT006718 EMBL:AY220877 EMBL:AK291944
EMBL:BC014889 EMBL:U43920 IPI:IPI00983171 RefSeq:NP_006259.1
UniGene:Hs.13495 PDB:3IUF PDBsum:3IUF ProteinModelPortal:Q92785
SMR:Q92785 DIP:DIP-27575N IntAct:Q92785 MINT:MINT-1160145
STRING:Q92785 PhosphoSite:Q92785 DMDM:2842711 PaxDb:Q92785
PeptideAtlas:Q92785 PRIDE:Q92785 DNASU:5977 Ensembl:ENST00000528416
GeneID:5977 KEGG:hsa:5977 UCSC:uc001odm.3 GeneCards:GC11P065103
HGNC:HGNC:9964 HPA:HPA020880 MIM:601671 neXtProt:NX_Q92785
PharmGKB:PA34331 InParanoid:Q92785 ChiTaRS:DPF2
EvolutionaryTrace:Q92785 GenomeRNAi:5977 NextBio:23263
PMAP-CutDB:Q92785 ArrayExpress:Q92785 Bgee:Q92785 CleanEx:HS_DPF2
Genevestigator:Q92785 GermOnline:ENSG00000133884 Uniprot:Q92785
Length = 391
Score = 136 (52.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ E ++LL CD CD+G+HM CL P + P G+W C C
Sbjct: 330 CNICGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLC 374
>UNIPROTKB|F1PXH9 [details] [associations]
symbol:DPF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 OMA:FPPVKSE EMBL:AAEX03011641
ProteinModelPortal:F1PXH9 Ensembl:ENSCAFT00000021664 Uniprot:F1PXH9
Length = 405
Score = 136 (52.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ E ++LL CD CD+G+HM CL P + P G+W C C
Sbjct: 344 CNICGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLC 388
>UNIPROTKB|J3KMZ8 [details] [associations]
symbol:DPF2 "Zinc finger protein ubi-d4" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
HGNC:HGNC:9964 ChiTaRS:DPF2 EMBL:AP000944 ProteinModelPortal:J3KMZ8
Ensembl:ENST00000252268 OMA:FPPVKSE Uniprot:J3KMZ8
Length = 405
Score = 136 (52.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ E ++LL CD CD+G+HM CL P + P G+W C C
Sbjct: 344 CNICGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLC 388
>UNIPROTKB|F1RRH9 [details] [associations]
symbol:DPF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005813 "centrosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00184 SMART:SM00249 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR025750 Pfam:PF14051 GeneTree:ENSGT00530000063194
OMA:FPPVKSE EMBL:CU856029 Ensembl:ENSSSCT00000014205 Uniprot:F1RRH9
Length = 405
Score = 136 (52.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ E ++LL CD CD+G+HM CL P + P G+W C C
Sbjct: 344 CNICGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLC 388
>UNIPROTKB|F1P989 [details] [associations]
symbol:BAZ2A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01429
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982
SMART:SM00249 SMART:SM00297 SMART:SM00384 SMART:SM00391
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:AAEX03006927
EMBL:AAEX03006928 Ensembl:ENSCAFT00000000220 Uniprot:F1P989
Length = 1911
Score = 144 (55.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 32/88 (36%), Positives = 45/88 (51%)
Query: 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
V C C G+ E LLLCD CD+G H+ C RP + VP G W C C Q+ F+Q+
Sbjct: 1684 VTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCAVCLAQQVEGGFAQKP 1743
Query: 120 IIDFFKIKKPNLTEEKCDSPQDTRKRRR 147
F K + + + + P+ +RRR
Sbjct: 1744 --GFPKRGQKRKSSYELNFPEGDGRRRR 1769
>UNIPROTKB|J9NSC0 [details] [associations]
symbol:BAZ2A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01429
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982
SMART:SM00249 SMART:SM00297 SMART:SM00384 SMART:SM00391
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 OMA:WIVEGRL Gene3D:3.30.890.10
EMBL:AAEX03006927 EMBL:AAEX03006928 Ensembl:ENSCAFT00000049267
Uniprot:J9NSC0
Length = 1921
Score = 144 (55.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 32/88 (36%), Positives = 45/88 (51%)
Query: 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
V C C G+ E LLLCD CD+G H+ C RP + VP G W C C Q+ F+Q+
Sbjct: 1694 VTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCAVCLAQQVEGGFAQKP 1753
Query: 120 IIDFFKIKKPNLTEEKCDSPQDTRKRRR 147
F K + + + + P+ +RRR
Sbjct: 1754 --GFPKRGQKRKSSYELNFPEGDGRRRR 1779
>UNIPROTKB|B7ZS37 [details] [associations]
symbol:baz2a "Bromodomain adjacent to zinc finger domain
protein 2A" species:8355 "Xenopus laevis" [GO:0000183 "chromatin
silencing at rDNA" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0005677 "chromatin silencing complex"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0006306
"DNA methylation" evidence=ISS] [GO:0016575 "histone deacetylation"
evidence=ISS] [GO:0033553 "rDNA heterochromatin" evidence=ISS]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISS]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 SMART:SM00384 SMART:SM00391 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0003723 SUPFAM:SSF54171 GO:GO:0000183 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 GO:GO:0006306 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 GO:GO:0070577 InterPro:IPR018359 GO:GO:0005677
InterPro:IPR004022 InterPro:IPR018501 Pfam:PF02791 PROSITE:PS50827
CTD:11176 KO:K15224 GO:GO:0033553 GO:GO:0016575 Gene3D:3.30.890.10
EMBL:AY145834 EMBL:BC170384 EMBL:BC170386 RefSeq:NP_001082767.1
UniGene:Xl.5323 GeneID:398712 KEGG:xla:398712
Xenbase:XB-GENE-965905 Uniprot:B7ZS37
Length = 1698
Score = 143 (55.4 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 34/93 (36%), Positives = 47/93 (50%)
Query: 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
V C C G+ E LLLCD CD+G H C RP + +P G W CP C + F R
Sbjct: 1477 VTCLYCRKGDNDELLLLCDSCDRGCHTYCHRPRMNEIPEGDWFCPTCISLQSESEFL-RS 1535
Query: 120 IIDFFKIKKPNLTEEKCDSP-QDTRKRRRRSAS 151
+I+K + + DSP + +R+R +AS
Sbjct: 1536 SGSSKRIRKCTVRFTE-DSPSKPSRRREHPTAS 1567
>UNIPROTKB|P58268 [details] [associations]
symbol:REQ "Zinc finger protein ubi-d4" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 GO:GO:0005634
GO:GO:0005737 GO:GO:0006915 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359
HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 EMBL:AF362751 IPI:IPI00591152
RefSeq:NP_989662.1 UniGene:Gga.48 ProteinModelPortal:P58268
GeneID:374236 KEGG:gga:374236 CTD:5977 InParanoid:P58268 KO:K13196
OrthoDB:EOG41JZD4 NextBio:20813734 Uniprot:P58268
Length = 405
Score = 135 (52.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ E ++LL CD CD+G+HM CL P + P G+W C C
Sbjct: 344 CNICGTSENDDQLLFCDDCDRGYHMYCLTPPMSEPPEGSWSCHLC 388
>MGI|MGI:1922855 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IDA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISO] [GO:0034720 "histone H3-K4
demethylation" evidence=ISO;IDA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 MGI:MGI:1922855 GO:GO:0003714 GO:GO:0045892
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 CTD:10765
OrthoDB:EOG4HT8RC OMA:CENEKEM EMBL:AY082429 EMBL:AY082430
EMBL:AK220451 EMBL:BC048180 EMBL:BC057318 EMBL:AK041304
IPI:IPI00330824 IPI:IPI00776332 RefSeq:NP_690855.2 UniGene:Mm.28995
UniGene:Mm.391994 PDB:2EQY PDBsum:2EQY ProteinModelPortal:Q80Y84
SMR:Q80Y84 IntAct:Q80Y84 STRING:Q80Y84 PhosphoSite:Q80Y84
PRIDE:Q80Y84 Ensembl:ENSMUST00000047714 Ensembl:ENSMUST00000112198
GeneID:75605 KEGG:mmu:75605 UCSC:uc007csg.2 UCSC:uc011wsg.1
InParanoid:Q80Y84 EvolutionaryTrace:Q80Y84 NextBio:343484
Bgee:Q80Y84 Genevestigator:Q80Y84 Uniprot:Q80Y84
Length = 1544
Score = 139 (54.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 25/48 (52%), Positives = 28/48 (58%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
C CGSG + LLLCD CD +H CL P + VP G W CPKC Q
Sbjct: 312 CLLCGSGNDEDRLLLCDGCDDSYHTFCLVPPLHDVPKGDWRCPKCLAQ 359
Score = 49 (22.3 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 22/97 (22%), Positives = 43/97 (44%)
Query: 152 LVLQKKRRRLLPFTPS-EDRSQRLSQMGSLAHALTALQMEFSDDLTYMPGMAPRSANQAE 210
L L++K+R+L PS + RS +L + L AL ME + M + + E
Sbjct: 1099 LGLKRKQRKLKEPLPSGKKRSTKLESLSDLERAL----MESKETAAAMATLGEARLREME 1154
Query: 211 FEEGGMQVLSKED----TETLEQCRAMCKRGECPPLV 243
+ ++ ++E + LE +C++ P++
Sbjct: 1155 ALQS-LRFANEEKLLSPVQDLEMKVCLCQKTPATPMI 1190
>UNIPROTKB|E1BEB3 [details] [associations]
symbol:KAT6A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070776 "MOZ/MORF histone acetyltransferase complex"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0035162 "embryonic hemopoiesis"
evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0030099 "myeloid cell differentiation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0004402 "histone acetyltransferase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0000786 "nucleosome" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002717
InterPro:IPR005818 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01853
PROSITE:PS50016 PROSITE:PS51504 SMART:SM00184 SMART:SM00249
SMART:SM00526 GO:GO:0045892 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0035019 GO:GO:0006334
GO:GO:0035162 GO:GO:0000786 GO:GO:0070776 GO:GO:0043966
GO:GO:0004402 GO:GO:0030099 GeneTree:ENSGT00550000074503
OMA:GAYQDCE EMBL:DAAA02060948 EMBL:DAAA02060949 IPI:IPI00687949
Ensembl:ENSBTAT00000005242 Uniprot:E1BEB3
Length = 2009
Score = 152 (58.6 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 62 CEQC-GSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
C C G+ A+ +L CD CD+GFHM+C P + R+P G W+C C +++ R Q+K
Sbjct: 265 CSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRPRKKGRKLLQKK 323
Score = 37 (18.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 118 RKIIDFFKIKKPNLTEEKCDSPQD 141
RK + F K P L E+ +PQ+
Sbjct: 873 RKAQERFGDKDPKLLLEETSAPQE 896
>UNIPROTKB|B3KV94 [details] [associations]
symbol:JARID1B "cDNA FLJ16281 fis, clone NT2RI3003104,
highly similar to Homo sapiens Jumonji, AT rich interactive domain
1B (RBP2-like) (JARID1B), mRNA" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:CH471067 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0032453
HOGENOM:HOG000290719 EMBL:AC098934 EMBL:AC104463 UniGene:Hs.443650
HGNC:HGNC:18039 ChiTaRS:KDM5B HOVERGEN:HBG068574 EMBL:AK122752
IPI:IPI00877939 SMR:B3KV94 STRING:B3KV94 Ensembl:ENST00000235790
Uniprot:B3KV94
Length = 1275
Score = 139 (54.0 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 25/48 (52%), Positives = 28/48 (58%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
C CGSG + LLLCD CD +H CL P + VP G W CPKC Q
Sbjct: 154 CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQ 201
Score = 47 (21.6 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 152 LVLQKKRRRLL-PFTPSEDRSQRLSQMGSLAHALT 185
L L++K+R+L P + +S +L + L ALT
Sbjct: 941 LGLKRKQRKLKEPLPNGKKKSTKLESLSDLERALT 975
>UNIPROTKB|C9JGA3 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 PROSITE:PS50016
PROSITE:PS51011 SMART:SM00249 SMART:SM00501 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AC010889 HGNC:HGNC:11115 ChiTaRS:KDM5D
IPI:IPI00644852 ProteinModelPortal:C9JGA3 SMR:C9JGA3 STRING:C9JGA3
Ensembl:ENST00000447300 HOGENOM:HOG000174636 ArrayExpress:C9JGA3
Bgee:C9JGA3 Uniprot:C9JGA3
Length = 425
Score = 135 (52.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C+ C G+ ++LL CD CD +H+ CL P + +P G W CPKC
Sbjct: 272 CQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKC 316
>UNIPROTKB|F1MFX5 [details] [associations]
symbol:F1MFX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070776 "MOZ/MORF histone acetyltransferase complex"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000786 "nucleosome"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR002717 InterPro:IPR005818 InterPro:IPR019787
Pfam:PF00538 Pfam:PF00628 Pfam:PF01853 PROSITE:PS50016
PROSITE:PS51504 SMART:SM00184 SMART:SM00249 SMART:SM00526
GO:GO:0045892 GO:GO:0045893 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006334
GO:GO:0000786 GO:GO:0070776 GO:GO:0043966 GO:GO:0004402
GeneTree:ENSGT00550000074503 OMA:KRKRPFV EMBL:DAAA02061914
IPI:IPI00706319 Ensembl:ENSBTAT00000003798 Uniprot:F1MFX5
Length = 1751
Score = 142 (55.0 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 62 CEQCG-SGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
C C G+ A+ +L CD CD+GFHM+C P + R+P G W+C C +++ R K
Sbjct: 261 CSACRIQGKNADNMLFCDSCDRGFHMECCDPPLSRMPKGMWICQVCRPKKKGRKLLHEK 319
>UNIPROTKB|H0YEK2 [details] [associations]
symbol:PHF21A "PHD finger protein 21A" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC068385
HGNC:HGNC:24156 EMBL:AC024475 EMBL:AC129913 Ensembl:ENST00000530587
Bgee:H0YEK2 Uniprot:H0YEK2
Length = 116
Score = 113 (44.8 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 74 LLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
LL+CD C + +H+ CL P + +P G W+CP+C Q
Sbjct: 1 LLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 36
>MGI|MGI:1858746 [details] [associations]
symbol:Kat6b "K(lysine) acetyltransferase 6B" species:10090
"Mus musculus" [GO:0000786 "nucleosome" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=ISO;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016407 "acetyltransferase activity" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=ISO;IDA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016746 "transferase activity, transferring acyl
groups" evidence=IEA] [GO:0016747 "transferase activity,
transferring acyl groups other than amino-acyl groups"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070776 "MOZ/MORF histone acetyltransferase
complex" evidence=ISO] InterPro:IPR001965 InterPro:IPR002717
InterPro:IPR005818 InterPro:IPR019787 Pfam:PF00538 Pfam:PF00628
Pfam:PF01853 PROSITE:PS50016 PROSITE:PS51504 SMART:SM00249
SMART:SM00526 MGI:MGI:1858746 GO:GO:0045892 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.40.630.30
InterPro:IPR016181 SUPFAM:SSF55729 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 GO:GO:0008134 GO:GO:0006334 GO:GO:0000786
GO:GO:0070776 GO:GO:0043966 GO:GO:0004402 EMBL:AY294423
eggNOG:COG5027 GeneTree:ENSGT00550000074503 HOGENOM:HOG000234365
HOVERGEN:HBG052563 CTD:23522 KO:K11306 OMA:KRKRPFV EMBL:AF222800
EMBL:AK045188 EMBL:AK048336 EMBL:AK052307 EMBL:AK083123
EMBL:AC115122 EMBL:AC148978 IPI:IPI00123569 IPI:IPI00457388
IPI:IPI00608081 IPI:IPI00667176 RefSeq:NP_059507.2
UniGene:Mm.248967 ProteinModelPortal:Q8BRB7 SMR:Q8BRB7
STRING:Q8BRB7 PhosphoSite:Q8BRB7 PRIDE:Q8BRB7
Ensembl:ENSMUST00000069648 GeneID:54169 KEGG:mmu:54169
UCSC:uc007slf.1 UCSC:uc007slj.1 UCSC:uc007slk.1 InParanoid:Q8BRB7
OrthoDB:EOG4PZJ5S NextBio:311014 Bgee:Q8BRB7 Genevestigator:Q8BRB7
GermOnline:ENSMUSG00000021767 Uniprot:Q8BRB7
Length = 1872
Score = 142 (55.0 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 62 CEQCG-SGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
C C G+ A+ +L CD CD+GFHM+C P + R+P G W+C C +++ R K
Sbjct: 273 CSACRVQGKNADNMLFCDSCDRGFHMECCDPPLSRMPKGMWICQVCRPKKKGRKLLHEK 331
>ZFIN|ZDB-GENE-030131-5132 [details] [associations]
symbol:dpf2l "D4, zinc and double PHD fingers
family 2, like" species:7955 "Danio rerio" [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR007087
InterPro:IPR015880 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028
PROSITE:PS50016 PROSITE:PS50157 SMART:SM00184 SMART:SM00249
SMART:SM00355 ZFIN:ZDB-GENE-030131-5132 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 HOVERGEN:HBG004475
InterPro:IPR025750 Pfam:PF14051 eggNOG:NOG271547
HOGENOM:HOG000217918 GeneTree:ENSGT00530000063194 EMBL:BX005228
EMBL:BC092130 IPI:IPI00490729 RefSeq:NP_997861.2 UniGene:Dr.75185
STRING:Q58E00 Ensembl:ENSDART00000054243 GeneID:326933
KEGG:dre:326933 CTD:326933 InParanoid:Q58E00 OMA:ERSILMP
OrthoDB:EOG40CHH8 NextBio:20809799 Uniprot:Q58E00
Length = 405
Score = 134 (52.2 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ E ++LL CD CD+G+HM CL P + P G+W C C
Sbjct: 342 CNVCGTSENDDQLLFCDDCDRGYHMYCLSPPMSDPPEGSWSCHLC 386
>MGI|MGI:99781 [details] [associations]
symbol:Kdm5c "lysine (K)-specific demethylase 5C"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0042802 "identical
protein binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99781 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0032453
KO:K11446 CTD:8242 OrthoDB:EOG4894KP ChiTaRS:KDM5C EMBL:AF127245
EMBL:AK008105 EMBL:AK155279 EMBL:AK155427 EMBL:AK155651
EMBL:AK158340 EMBL:AK011577 EMBL:BC043096 EMBL:BC054550 EMBL:Z29651
EMBL:AK129096 EMBL:L29563 EMBL:AF039894 IPI:IPI00112611
IPI:IPI00221399 IPI:IPI00776021 PIR:I48775 PIR:I84689
RefSeq:NP_038696.2 UniGene:Mm.142655 ProteinModelPortal:P41230
SMR:P41230 STRING:P41230 PhosphoSite:P41230 PaxDb:P41230
PRIDE:P41230 Ensembl:ENSMUST00000082177 Ensembl:ENSMUST00000112584
Ensembl:ENSMUST00000112588 GeneID:20591 KEGG:mmu:20591
UCSC:uc009uqc.2 UCSC:uc009uqd.2 UCSC:uc009uqe.2 InParanoid:P41230
NextBio:298901 Bgee:P41230 Genevestigator:P41230
GermOnline:ENSMUSG00000025332 Uniprot:P41230
Length = 1554
Score = 140 (54.3 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C C G+ ++LLLCD CD +H+ CL P + +P G W CPKC
Sbjct: 327 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKC 371
Score = 47 (21.6 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 208 QAEFEEGGMQVLSKEDTETLEQCRAMCKRGECPP--LVVVYDSCEGFTVEADG--QIKDM 263
QAE +E + +++ E C + R + PP L + E V +K+
Sbjct: 970 QAELQE--LLTIAERWEEKAHLC--LEARQKHPPATLEAIIHEAENIPVHLPNIQSLKEA 1025
Query: 264 TFIAE-YIGDVDFIRNREHDDC 284
A +I DVD I+N +H C
Sbjct: 1026 LAKARAWIADVDEIQNGDHYPC 1047
>FB|FBgn0026577 [details] [associations]
symbol:CG8677 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0005705 "polytene
chromosome interband" evidence=IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0031213 "RSF complex" evidence=IPI]
[GO:0070868 "heterochromatin organization involved in chromatin
silencing" evidence=IMP] InterPro:IPR001965 InterPro:IPR019787
PROSITE:PS50016 SMART:SM00249 EMBL:AE014134 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0070868 InterPro:IPR018501 PROSITE:PS50827
GO:GO:0005705 GO:GO:0031213 HSSP:Q9UIG0 KO:K11657
FlyBase:FBgn0026577 ChiTaRS:CG8677 RefSeq:NP_610101.2
UniGene:Dm.5226 ProteinModelPortal:Q9VID9 SMR:Q9VID9
MINT:MINT-984807 GeneID:35397 KEGG:dme:Dmel_CG8677 UCSC:CG8677-RA
InParanoid:Q9VID9 OMA:DYTETET PhylomeDB:Q9VID9 GenomeRNAi:35397
NextBio:793312 ArrayExpress:Q9VID9 Bgee:Q9VID9 Uniprot:Q9VID9
Length = 2759
Score = 151 (58.2 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 30/107 (28%), Positives = 54/107 (50%)
Query: 52 VERGDYGDVGCEQCGSGERAEELLLCDK--CDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
+E D + C++CG + E +LLCD C+KG+H CL P++ +P G W CP C +
Sbjct: 1364 LEEED-AEEACQKCGKSDHPEWILLCDTPTCNKGYHCSCLSPVLFYIPEGDWHCPPCQQE 1422
Query: 110 RRVRSFSQRKIIDFFKIKKPNLTEEKCDSPQDTRKRRRRSASLVLQK 156
+ + + +R++ + + E Q R+R+ A+ + K
Sbjct: 1423 QLIAAL-ERQLEQYDTLVAQKQQERILAEEQAERERQELEAATLAAK 1468
Score = 40 (19.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 253 TVEADGQIKDMTFI---AEYIGDVDFIRNREHDDCD 285
+V ++ D+ ++ E IGD+D + E DD +
Sbjct: 2019 SVIRQAKVLDIDYLQRKGETIGDLDDVDESELDDAE 2054
Score = 39 (18.8 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 274 DFIRNREHDDCDSMMTLLLATDPSKSLVICPDKRGN 309
D + N+E + D + + PS S P KR N
Sbjct: 1621 DEVGNKEDGEKDKQKSKSSGSSPSSSEDEVPLKRSN 1656
>ZFIN|ZDB-GENE-000607-52 [details] [associations]
symbol:kat6b "K(lysine) acetyltransferase 6B"
species:7955 "Danio rerio" [GO:0016747 "transferase activity,
transferring acyl groups other than amino-acyl groups"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000786
"nucleosome" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006334 "nucleosome assembly" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR002717
InterPro:IPR005818 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01853
PROSITE:PS50016 PROSITE:PS51504 SMART:SM00249 SMART:SM00526
ZFIN:ZDB-GENE-000607-52 GO:GO:0005634 GO:GO:0006355 GO:GO:0016747
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.40.630.30
InterPro:IPR016181 SUPFAM:SSF55729 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006334
GO:GO:0000786 GeneTree:ENSGT00550000074503 EMBL:AL929334
IPI:IPI00613346 Ensembl:ENSDART00000077775 Bgee:F1R4F8
Uniprot:F1R4F8
Length = 2043
Score = 142 (55.0 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 60 VGCEQCGS----GERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
+ C+ C S G+ A+E+L CD CD+GFHM+C P + R+P G W+C C
Sbjct: 267 IECKTCSSCQIQGKNADEMLFCDSCDRGFHMECCDPPLSRMPKGMWICQVC 317
>UNIPROTKB|F1S2G4 [details] [associations]
symbol:KAT6B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070776 "MOZ/MORF histone acetyltransferase complex"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000786 "nucleosome"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR002717 InterPro:IPR005818 InterPro:IPR019787
Pfam:PF00538 Pfam:PF00628 Pfam:PF01853 PROSITE:PS50016
PROSITE:PS51504 SMART:SM00184 SMART:SM00249 SMART:SM00526
GO:GO:0045892 GO:GO:0045893 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006334
GO:GO:0000786 GO:GO:0070776 GO:GO:0043966 GO:GO:0004402
EMBL:CT737343 GeneTree:ENSGT00550000074503 OMA:KRKRPFV
EMBL:CT737367 EMBL:CU606998 Ensembl:ENSSSCT00000011293
Uniprot:F1S2G4
Length = 2054
Score = 142 (55.0 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 62 CEQCG-SGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
C C G+ A+ +L CD CD+GFHM+C P + R+P G W+C C +++ R K
Sbjct: 261 CSACRIQGKNADNMLFCDSCDRGFHMECCDPPLSRMPKGMWICQVCRPKKKGRKLLHEK 319
>UNIPROTKB|A1YVX4 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
KO:K11446 CTD:8242 EMBL:EF139241 RefSeq:NP_001090902.1
UniGene:Ssc.25162 ProteinModelPortal:A1YVX4 SMR:A1YVX4
GeneID:100037295 KEGG:ssc:100037295 Uniprot:A1YVX4
Length = 1516
Score = 140 (54.3 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C C G+ ++LLLCD CD +H+ CL P + +P G W CPKC
Sbjct: 286 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKC 330
Score = 46 (21.3 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 208 QAEFEEGGMQVLSKEDTETLEQCRAMCKRGECPP--LVVVYDSCEGFTVEADG--QIKDM 263
QAE +E + +++ E C + R + PP L + E V +K+
Sbjct: 929 QAELQE--LLTIAERWEEKAHLC--LEARQKHPPATLEAIIHEAENIPVHLPNIQALKEA 984
Query: 264 TFIAE-YIGDVDFIRNREHDDC 284
A +I DVD I+N +H C
Sbjct: 985 LAKARAWIADVDEIQNGDHYPC 1006
>UNIPROTKB|F1RUI7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 OMA:ISWQGRA
EMBL:FP102491 Ensembl:ENSSSCT00000013473 ArrayExpress:F1RUI7
Uniprot:F1RUI7
Length = 1516
Score = 140 (54.3 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C C G+ ++LLLCD CD +H+ CL P + +P G W CPKC
Sbjct: 286 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKC 330
Score = 46 (21.3 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 208 QAEFEEGGMQVLSKEDTETLEQCRAMCKRGECPP--LVVVYDSCEGFTVEADG--QIKDM 263
QAE +E + +++ E C + R + PP L + E V +K+
Sbjct: 929 QAELQE--LLTIAERWEEKAHLC--LEARQKHPPATLEAIIHEAENIPVHLPNIQALKEA 984
Query: 264 TFIAE-YIGDVDFIRNREHDDC 284
A +I DVD I+N +H C
Sbjct: 985 LAKARAWIADVDEIQNGDHYPC 1006
>UNIPROTKB|D4A3B4 [details] [associations]
symbol:D4A3B4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00949627
Ensembl:ENSRNOT00000067288 ArrayExpress:D4A3B4 Uniprot:D4A3B4
Length = 1490
Score = 140 (54.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C C G+ ++LLLCD CD +H+ CL P + +P G W CPKC
Sbjct: 286 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKC 330
>UNIPROTKB|F1MYV2 [details] [associations]
symbol:KDM5C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 KO:K11446 CTD:8242
OMA:ISWQGRA EMBL:DAAA02073278 IPI:IPI00703369 RefSeq:NP_776610.2
UniGene:Bt.8145 PRIDE:F1MYV2 Ensembl:ENSBTAT00000019893
GeneID:281490 KEGG:bta:281490 NextBio:20805465 ArrayExpress:F1MYV2
Uniprot:F1MYV2
Length = 1555
Score = 140 (54.3 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C C G+ ++LLLCD CD +H+ CL P + +P G W CPKC
Sbjct: 327 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKC 371
Score = 46 (21.3 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 208 QAEFEEGGMQVLSKEDTETLEQCRAMCKRGECPP--LVVVYDSCEGFTVEADG--QIKDM 263
QAE +E + +++ E C + R + PP L + E V +K+
Sbjct: 970 QAELQE--LLTIAERWEEKAHLC--LEARQKHPPATLEAIIHEAENIPVHLPNIQALKEA 1025
Query: 264 TFIAE-YIGDVDFIRNREHDDC 284
A +I DVD I+N +H C
Sbjct: 1026 LAKARAWIADVDEIQNGDHYPC 1047
>UNIPROTKB|Q9UGL1 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IDA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone H3-K4
demethylation" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0034721 "histone
H3-K4 demethylation, trimethyl-H3-K4-specific" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GO:GO:0034647 KO:K11446
HOGENOM:HOG000290719 HSSP:Q14839 CTD:10765 OrthoDB:EOG4HT8RC
EMBL:AJ132440 EMBL:AF087481 EMBL:AJ243706 EMBL:AC098934
EMBL:AC104463 IPI:IPI00847436 IPI:IPI00873956 RefSeq:NP_006609.3
UniGene:Hs.443650 ProteinModelPortal:Q9UGL1 SMR:Q9UGL1
DIP:DIP-53652N IntAct:Q9UGL1 STRING:Q9UGL1 PhosphoSite:Q9UGL1
DMDM:296439317 PaxDb:Q9UGL1 PRIDE:Q9UGL1 Ensembl:ENST00000367264
Ensembl:ENST00000367265 GeneID:10765 KEGG:hsa:10765 UCSC:uc001gyf.3
UCSC:uc009xag.3 GeneCards:GC01M202696 H-InvDB:HIX0001478
HGNC:HGNC:18039 HPA:HPA027179 MIM:605393 neXtProt:NX_Q9UGL1
PharmGKB:PA164721626 InParanoid:Q9UGL1 OMA:CENEKEM ChiTaRS:KDM5B
GenomeRNAi:10765 NextBio:40877 ArrayExpress:Q9UGL1 Bgee:Q9UGL1
CleanEx:HS_JARID1B Genevestigator:Q9UGL1 Uniprot:Q9UGL1
Length = 1544
Score = 139 (54.0 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 25/48 (52%), Positives = 28/48 (58%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
C CGSG + LLLCD CD +H CL P + VP G W CPKC Q
Sbjct: 312 CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQ 359
Score = 47 (21.6 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 152 LVLQKKRRRLL-PFTPSEDRSQRLSQMGSLAHALT 185
L L++K+R+L P + +S +L + L ALT
Sbjct: 1099 LGLKRKQRKLKEPLPNGKKKSTKLESLSDLERALT 1133
>UNIPROTKB|K7GNM7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:FP102491
Ensembl:ENSSSCT00000032687 Uniprot:K7GNM7
Length = 1560
Score = 140 (54.3 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C C G+ ++LLLCD CD +H+ CL P + +P G W CPKC
Sbjct: 327 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKC 371
Score = 46 (21.3 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 208 QAEFEEGGMQVLSKEDTETLEQCRAMCKRGECPP--LVVVYDSCEGFTVEADG--QIKDM 263
QAE +E + +++ E C + R + PP L + E V +K+
Sbjct: 970 QAELQE--LLTIAERWEEKAHLC--LEARQKHPPATLEAIIHEAENIPVHLPNIQALKEA 1025
Query: 264 TFIAE-YIGDVDFIRNREHDDC 284
A +I DVD I+N +H C
Sbjct: 1026 LAKARAWIADVDEIQNGDHYPC 1047
>UNIPROTKB|F1N6I8 [details] [associations]
symbol:BAZ2A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070869 "heterochromatin assembly involved in chromatin
silencing" evidence=IEA] [GO:0051567 "histone H3-K9 methylation"
evidence=IEA] [GO:0034770 "histone H4-K20 methylation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001739 InterPro:IPR001965 InterPro:IPR016177
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01429 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00297 SMART:SM00384
SMART:SM00391 GO:GO:0005730 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 SUPFAM:SSF54171 GO:GO:0000183
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0051567 GO:GO:0016585 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 OMA:WIVEGRL GO:GO:0070869
GO:GO:0070933 GO:GO:0034770 Gene3D:3.30.890.10 EMBL:DAAA02013527
IPI:IPI01000629 UniGene:Bt.64668 Ensembl:ENSBTAT00000038215
NextBio:20869136 Uniprot:F1N6I8
Length = 2013
Score = 141 (54.7 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 32/88 (36%), Positives = 43/88 (48%)
Query: 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
V C C G+ E LLLCD CD+G H+ CLRP + VP G W C C Q+ +Q+
Sbjct: 1786 VTCLVCRKGDNDEFLLLCDGCDRGCHIYCLRPKMEAVPEGDWFCAVCLAQQVEGELTQKS 1845
Query: 120 IIDFFKIKKPNLTEEKCDSPQDTRKRRR 147
F K + + P+ +RRR
Sbjct: 1846 --GFPKRGQKRKSGYVLTFPEGDNRRRR 1871
>UNIPROTKB|Q8WYB5 [details] [associations]
symbol:KAT6B "Histone acetyltransferase KAT6B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0070776 "MOZ/MORF histone
acetyltransferase complex" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0004402 "histone acetyltransferase activity" evidence=IDA]
[GO:0000786 "nucleosome" evidence=NAS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006334
"nucleosome assembly" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016407 "acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=IDA]
InterPro:IPR001965 InterPro:IPR002717 InterPro:IPR005818
InterPro:IPR019787 Pfam:PF00538 Pfam:PF00628 Pfam:PF01853
PROSITE:PS50016 PROSITE:PS51504 SMART:SM00249 SMART:SM00526
GO:GO:0045892 GO:GO:0045893 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 BRENDA:2.3.1.48 GO:GO:0008134
GO:GO:0006334 GO:GO:0000786 Orphanet:648 GO:GO:0070776
GO:GO:0043966 GO:GO:0004402 eggNOG:COG5027 HOVERGEN:HBG052563
EMBL:AF113514 EMBL:AF119230 EMBL:AF119231 EMBL:AF217500
EMBL:AB002381 EMBL:BC014143 EMBL:BC021128 EMBL:BC048199
IPI:IPI00099433 IPI:IPI00384388 IPI:IPI00607795
RefSeq:NP_001243397.1 RefSeq:NP_001243398.1 RefSeq:NP_036462.2
UniGene:Hs.35758 UniGene:Hs.599543 UniGene:Hs.740873
ProteinModelPortal:Q8WYB5 SMR:Q8WYB5 IntAct:Q8WYB5
MINT:MINT-2871056 STRING:Q8WYB5 PhosphoSite:Q8WYB5 DMDM:143811424
PaxDb:Q8WYB5 PRIDE:Q8WYB5 Ensembl:ENST00000287239
Ensembl:ENST00000372711 Ensembl:ENST00000372714
Ensembl:ENST00000372724 Ensembl:ENST00000372725 GeneID:23522
KEGG:hsa:23522 UCSC:uc001jwn.1 UCSC:uc001jwo.1 UCSC:uc001jwp.1
CTD:23522 GeneCards:GC10P076586 HGNC:HGNC:17582 HPA:HPA006104
MIM:603736 MIM:605880 MIM:606170 neXtProt:NX_Q8WYB5 Orphanet:3047
Orphanet:85201 PharmGKB:PA134880712 InParanoid:Q8WYB5 KO:K11306
OMA:KRKRPFV PhylomeDB:Q8WYB5 ChiTaRS:KAT6B GenomeRNAi:23522
NextBio:45977 ArrayExpress:Q8WYB5 Bgee:Q8WYB5 CleanEx:HS_MYST4
Genevestigator:Q8WYB5 GermOnline:ENSG00000156650 Uniprot:Q8WYB5
Length = 2073
Score = 141 (54.7 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 62 CEQCG-SGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
C C G A+ +L CD CD+GFHM+C P + R+P G W+C C +++ R K
Sbjct: 272 CSACRVQGRNADNMLFCDSCDRGFHMECCDPPLSRMPKGMWICQVCRPKKKGRKLLHEK 330
>ZFIN|ZDB-GENE-120215-90 [details] [associations]
symbol:si:ch73-39g20.1 "si:ch73-39g20.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 ZFIN:ZDB-GENE-120215-90 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
GeneTree:ENSGT00530000064411 EMBL:CU570791 IPI:IPI00897032
Ensembl:ENSDART00000112648 Bgee:E7FCR1 Uniprot:E7FCR1
Length = 1263
Score = 145 (56.1 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C+ CG E +LLCD CD G+H CLRP ++ +P G W CP C
Sbjct: 774 CKHCGLANHPELILLCDLCDSGYHTACLRPPLMIIPDGEWFCPPC 818
Score = 38 (18.4 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 204 RSANQAEFEEGGMQVLSKEDTETLEQCRAMCKR 236
RS+++ E E+GG E E+ E+ R M KR
Sbjct: 1171 RSSSEDEEEDGG------ETEESEEEERPMRKR 1197
>UNIPROTKB|H0YEI1 [details] [associations]
symbol:DPF2 "Zinc finger protein ubi-d4" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
HGNC:HGNC:9964 ChiTaRS:DPF2 EMBL:AP000944 Ensembl:ENST00000531989
Bgee:H0YEI1 Uniprot:H0YEI1
Length = 116
Score = 111 (44.1 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 72 EELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
++LL CD CD+G+HM CL P + P G+W C C
Sbjct: 65 DQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLC 99
>UNIPROTKB|B0QZ44 [details] [associations]
symbol:KDM5C "Smcy homolog, X-linked (Mouse), isoform
CRA_a" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:CH471154 EMBL:AL139396 HOGENOM:HOG000290719
UniGene:Hs.631768 HGNC:HGNC:11114 ChiTaRS:KDM5C IPI:IPI00879547
SMR:B0QZ44 Ensembl:ENST00000404049 UCSC:uc004dsa.3
HOVERGEN:HBG068574 Uniprot:B0QZ44
Length = 1559
Score = 140 (54.3 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C C G+ ++LLLCD CD +H+ CL P + +P G W CPKC
Sbjct: 326 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKC 370
Score = 45 (20.9 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 208 QAEFEEGGMQVLSKEDTETLEQCRAMCKRGECPP--LVVVYDSCEGFTVEADG--QIKDM 263
QAE +E + +++ E C + R + PP L + E V +K+
Sbjct: 969 QAELQE--LLTIAERWEEKAHLC--LEARQKHPPATLEAIIREAENIPVHLPNIQALKEA 1024
Query: 264 TFIAE-YIGDVDFIRNREHDDC 284
A +I DVD I+N +H C
Sbjct: 1025 LAKARAWIADVDEIQNGDHYPC 1046
>UNIPROTKB|P41229 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AL139396
eggNOG:NOG327026 GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719
CTD:8242 OrthoDB:EOG4894KP EMBL:L25270 EMBL:AK304732 EMBL:BC054499
EMBL:Z29650 IPI:IPI00013185 IPI:IPI00219412 IPI:IPI00640875
IPI:IPI01012687 PIR:I54361 RefSeq:NP_001140174.1 RefSeq:NP_004178.2
UniGene:Hs.631768 PDB:2JRZ PDBsum:2JRZ ProteinModelPortal:P41229
SMR:P41229 DIP:DIP-39663N IntAct:P41229 STRING:P41229
PhosphoSite:P41229 DMDM:117949812 PaxDb:P41229 PRIDE:P41229
DNASU:8242 Ensembl:ENST00000375379 Ensembl:ENST00000375383
Ensembl:ENST00000375401 Ensembl:ENST00000452825 GeneID:8242
KEGG:hsa:8242 UCSC:uc004drz.3 GeneCards:GC0XM053237 HGNC:HGNC:11114
MIM:300534 MIM:314690 neXtProt:NX_P41229 Orphanet:85279
PharmGKB:PA35964 InParanoid:P41229 OMA:ISWQGRA PhylomeDB:P41229
ChiTaRS:KDM5C EvolutionaryTrace:P41229 GenomeRNAi:8242
NextBio:31002 ArrayExpress:P41229 Bgee:P41229 CleanEx:HS_JARID1C
Genevestigator:P41229 GermOnline:ENSG00000126012 Uniprot:P41229
Length = 1560
Score = 140 (54.3 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C C G+ ++LLLCD CD +H+ CL P + +P G W CPKC
Sbjct: 327 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKC 371
Score = 45 (20.9 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 208 QAEFEEGGMQVLSKEDTETLEQCRAMCKRGECPP--LVVVYDSCEGFTVEADG--QIKDM 263
QAE +E + +++ E C + R + PP L + E V +K+
Sbjct: 970 QAELQE--LLTIAERWEEKAHLC--LEARQKHPPATLEAIIREAENIPVHLPNIQALKEA 1025
Query: 264 TFIAE-YIGDVDFIRNREHDDC 284
A +I DVD I+N +H C
Sbjct: 1026 LAKARAWIADVDEIQNGDHYPC 1047
>ZFIN|ZDB-GENE-030131-6456 [details] [associations]
symbol:phf21ab "PHD finger protein 21Ab"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0060324
"face development" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
ZFIN:ZDB-GENE-030131-6456 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060324
GeneTree:ENSGT00530000063984 EMBL:BX088562 IPI:IPI00499307
UniGene:Dr.80349 Ensembl:ENSDART00000021577 NextBio:20885937
Bgee:E7F750 Uniprot:E7F750
Length = 796
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 55 GDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
GD GD+ + C R+ +LL+CD C + +H+ CL P + +P G W+CPKC Q
Sbjct: 455 GD-GDIHEDFCTVCRRSGQLLMCDTCSRVYHLDCLDPPLKNIPKGMWICPKCQDQ 508
>ZFIN|ZDB-GENE-041024-2 [details] [associations]
symbol:dpf2 "D4, zinc and double PHD fingers family
2" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
ZFIN:ZDB-GENE-041024-2 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051
CTD:5977 KO:K13196 EMBL:BC083281 IPI:IPI00483161
RefSeq:NP_001007153.1 UniGene:Dr.37136 ProteinModelPortal:Q5XJL8
PRIDE:Q5XJL8 GeneID:474324 KEGG:dre:474324 InParanoid:Q5XJL8
NextBio:20850390 ArrayExpress:Q5XJL8 Bgee:Q5XJL8 Uniprot:Q5XJL8
Length = 400
Score = 132 (51.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ E ++LL CD CD+G+HM CL P + P G+W C C
Sbjct: 337 CNICGTSENDDQLLFCDDCDRGYHMYCLSPPMSVPPEGSWSCHLC 381
>FB|FBgn0033636 [details] [associations]
symbol:tou "toutatis" species:7227 "Drosophila melanogaster"
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0003682
"chromatin binding" evidence=NAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001876 InterPro:IPR001965 InterPro:IPR016177
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01429
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982
SMART:SM00249 SMART:SM00297 SMART:SM00547 EMBL:AE013599
GO:GO:0005634 GO:GO:0007399 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0045944 SUPFAM:SSF54171 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018501
Pfam:PF02791 PROSITE:PS50827 GeneTree:ENSGT00660000095335
Gene3D:3.30.890.10 UniGene:Dm.2658 GeneID:36241
KEGG:dme:Dmel_CG10897 CTD:36241 FlyBase:FBgn0033636
GenomeRNAi:36241 NextBio:797507 RefSeq:NP_001097270.1
ProteinModelPortal:A8DYA3 SMR:A8DYA3 STRING:A8DYA3
EnsemblMetazoa:FBtr0113066 UCSC:CG10897-RE OMA:GRHTTLL
PhylomeDB:A8DYA3 Bgee:A8DYA3 Uniprot:A8DYA3
Length = 3131
Score = 142 (55.0 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C+ C SGE ++LLLCD CDKG+H C +P + +P G W C +C
Sbjct: 2641 CQFCTSGENEDKLLLCDGCDKGYHTYCFKPKMDNIPDGDWYCYEC 2685
>ZFIN|ZDB-GENE-060810-94 [details] [associations]
symbol:kdm5c "lysine (K)-specific demethylase 5C"
species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
ZFIN:ZDB-GENE-060810-94 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0043524 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 KO:K11446
HOGENOM:HOG000290719 CTD:8242 OMA:ISWQGRA HOVERGEN:HBG068574
EMBL:BX537348 IPI:IPI00611775 RefSeq:NP_001116706.1
UniGene:Dr.75967 SMR:B0S6L0 Ensembl:ENSDART00000098657
Ensembl:ENSDART00000127053 GeneID:553406 KEGG:dre:553406
NextBio:20880164 Uniprot:B0S6L0
Length = 1578
Score = 139 (54.0 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 22/45 (48%), Positives = 27/45 (60%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG G+ E+L+LCD CD +H CL P + P G W CPKC
Sbjct: 361 CRMCGRGDEDEKLMLCDGCDDNYHTFCLIPPLTDPPKGNWRCPKC 405
>CGD|CAL0000662 [details] [associations]
symbol:orf19.5651 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0000662
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACQ01000129 EMBL:AACQ01000128 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 RefSeq:XP_713332.1
RefSeq:XP_713379.1 ProteinModelPortal:Q59UR9 STRING:Q59UR9
GeneID:3644970 GeneID:3645037 KEGG:cal:CaO19.13096
KEGG:cal:CaO19.5651 Uniprot:Q59UR9
Length = 723
Score = 135 (52.6 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 22/45 (48%), Positives = 26/45 (57%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG + E LLCD CD +HMKCL P + VP +W C KC
Sbjct: 180 CLVCGQHDHPSETLLCDNCDNPYHMKCLNPPLESVPATSWYCDKC 224
>UNIPROTKB|J3QQU3 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
ChiTaRS:PHF12 ProteinModelPortal:J3QQU3 Ensembl:ENST00000583524
Uniprot:J3QQU3
Length = 129
Score = 110 (43.8 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 63 EQCGSGERAEELLLCDKCDKGFHMKCLRPIVVR--VPIGTWLCPKCSGQRRV--RSFSQR 118
+ C S + +LL CD C FH++C P + +P G W+C +C+ +R+V R +R
Sbjct: 57 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRRKVLARGEERR 116
Query: 119 K 119
K
Sbjct: 117 K 117
>UNIPROTKB|E1B6X6 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071884 "vitamin D receptor activator activity"
evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA] [GO:0070577
"histone acetyl-lysine binding" evidence=IEA] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=IEA]
[GO:0043596 "nuclear replication fork" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0042809
"vitamin D receptor binding" evidence=IEA] [GO:0035173 "histone
kinase activity" evidence=IEA] [GO:0034725 "DNA
replication-dependent nucleosome disassembly" evidence=IEA]
[GO:0032947 "protein complex scaffold" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0003007 GO:GO:0008270 GO:GO:0003682 GO:GO:0004713
GO:GO:0043596 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006302 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005721 GO:GO:0000793 GO:GO:0048096
GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 OMA:CNKAFHL
GO:GO:0071778 GO:GO:0035173 GO:GO:0071884 GO:GO:0034725
EMBL:DAAA02058197 IPI:IPI00704240 UniGene:Bt.32325
Ensembl:ENSBTAT00000006848 NextBio:20868520 Uniprot:E1B6X6
Length = 1482
Score = 138 (53.6 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 27/85 (31%), Positives = 48/85 (56%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC---SGQR--RVRSFS 116
C+ C ++L+LCD+C+K FH+ CLRP + VP G W CP C + +R R R+++
Sbjct: 1187 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPATARRNSRGRNYT 1246
Query: 117 QRKIIDFFKIKKPNLTEEKCDSPQD 141
+ + + + N EE+ + ++
Sbjct: 1247 EESASEDSEDDESNEEEEEEEEEEE 1271
>UNIPROTKB|F1P5W9 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000793
"condensed chromosome" evidence=IEA] [GO:0003007 "heart
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004713 "protein tyrosine kinase activity"
evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0032947 "protein complex scaffold" evidence=IEA]
[GO:0034725 "DNA replication-dependent nucleosome disassembly"
evidence=IEA] [GO:0035173 "histone kinase activity" evidence=IEA]
[GO:0042809 "vitamin D receptor binding" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=IEA]
[GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071884 "vitamin D
receptor activator activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0004713 GO:GO:0043596 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006302 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005721 GO:GO:0000793 GO:GO:0048096
GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018500
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF10537 SMART:SM00571
PROSITE:PS50827 PROSITE:PS51136 GeneTree:ENSGT00660000095335
OMA:CNKAFHL GO:GO:0071778 GO:GO:0035173 GO:GO:0071884 GO:GO:0034725
EMBL:AADN02026113 EMBL:AADN02026114 IPI:IPI00820657
Ensembl:ENSGALT00000040681 ArrayExpress:F1P5W9 Uniprot:F1P5W9
Length = 1488
Score = 138 (53.6 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 28/83 (33%), Positives = 40/83 (48%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRKII 121
C+ C ++L+LCD+C+K FH+ CLRP + +P G W CP C RS R
Sbjct: 1186 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEIPDGEWQCPACQPSTARRSSRGRNYT 1245
Query: 122 DFFKIKKPNLTEEKCDSPQDTRK 144
+ + EE D QD +
Sbjct: 1246 EDSAEDEGEEGEEASDE-QDAEE 1267
>UNIPROTKB|F1PWC5 [details] [associations]
symbol:KAT6B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016747 "transferase activity, transferring
acyl groups other than amino-acyl groups" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000786 "nucleosome"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR002717 InterPro:IPR005818 InterPro:IPR019787
Pfam:PF00538 Pfam:PF00628 Pfam:PF01853 PROSITE:PS50016
PROSITE:PS51504 SMART:SM00184 SMART:SM00249 SMART:SM00526
GO:GO:0005634 GO:GO:0006355 GO:GO:0016747 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0006334 GO:GO:0000786
GeneTree:ENSGT00550000074503 OMA:KRKRPFV EMBL:AAEX03002837
EMBL:AAEX03002838 Ensembl:ENSCAFT00000024383 Uniprot:F1PWC5
Length = 2063
Score = 142 (55.0 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 62 CEQCG-SGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
C C G+ A+ +L CD CD+GFHM+C P + R+P G W+C C +++ R K
Sbjct: 261 CSACRIQGKNADNMLFCDSCDRGFHMECCDPPLSRMPKGMWICQVCRPKKKGRKLLHEK 319
Score = 44 (20.5 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 206 ANQAEFEEGGMQVLSKED-TETLEQCRAM---CKRGECPPLVVVYDSCE 250
A Q+ +E Q + +D TET E CR++ + P + D C+
Sbjct: 1534 AVQSLTQENSEQDDTFQDCTETQEACRSLQNYTHADQSPQIATTLDDCQ 1582
>RGD|1305429 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A" species:10116
"Rattus norvegicus" [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=ISO]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 RGD:1305429 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 HOGENOM:HOG000290719 HOVERGEN:HBG068574
IPI:IPI00781814 EMBL:BC099835 UniGene:Rn.206273 UniGene:Rn.224608
ProteinModelPortal:Q499M6 UCSC:RGD:1305429 InParanoid:Q499M6
Genevestigator:Q499M6 Uniprot:Q499M6
Length = 1099
Score = 136 (52.9 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 23/45 (51%), Positives = 27/45 (60%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG G ++LLLCD CD +H CL P + VP G W CPKC
Sbjct: 296 CMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGDWRCPKC 340
>UNIPROTKB|E9PSW7 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00781814
Ensembl:ENSRNOT00000056198 OMA:IRTRTRN ArrayExpress:E9PSW7
Uniprot:E9PSW7
Length = 1099
Score = 136 (52.9 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 23/45 (51%), Positives = 27/45 (60%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG G ++LLLCD CD +H CL P + VP G W CPKC
Sbjct: 296 CMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGDWRCPKC 340
>UNIPROTKB|B4E1Y0 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 UniGene:Hs.80358 HGNC:HGNC:11115 ChiTaRS:KDM5D
HOVERGEN:HBG068574 EMBL:AK304027 IPI:IPI01013623 SMR:B4E1Y0
STRING:B4E1Y0 Ensembl:ENST00000535647 UCSC:uc004fuh.2
Uniprot:B4E1Y0
Length = 888
Score = 135 (52.6 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C+ C G+ ++LL CD CD +H+ CL P + +P G W CPKC
Sbjct: 317 CQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKC 361
>UNIPROTKB|E2R0S2 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ISWQGRA EMBL:AAEX03026384
Ensembl:ENSCAFT00000025665 Uniprot:E2R0S2
Length = 1520
Score = 140 (54.3 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C C G+ ++LLLCD CD +H+ CL P + +P G W CPKC
Sbjct: 327 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKC 371
Score = 43 (20.2 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 269 YIGDVDFIRNREHDDC 284
+I DVD I+N +H C
Sbjct: 1032 WIADVDEIQNGDHYPC 1047
>UNIPROTKB|Q38JA7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 KO:K11446 EMBL:DQ223016 RefSeq:NP_001041497.1
UniGene:Cfa.46487 ProteinModelPortal:Q38JA7 SMR:Q38JA7 PRIDE:Q38JA7
GeneID:491894 KEGG:cfa:491894 CTD:8242 InParanoid:Q38JA7
OrthoDB:EOG4894KP NextBio:20864597 Uniprot:Q38JA7
Length = 1556
Score = 140 (54.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C C G+ ++LLLCD CD +H+ CL P + +P G W CPKC
Sbjct: 327 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKC 371
Score = 43 (20.2 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 269 YIGDVDFIRNREHDDC 284
+I DVD I+N +H C
Sbjct: 1032 WIADVDEIQNGDHYPC 1047
>WB|WBGene00011729 [details] [associations]
symbol:set-16 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0016246
"RNA interference" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0006479 "protein methylation"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0040028
"regulation of vulval development" evidence=IGI] Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR015722 InterPro:IPR019787
Pfam:PF00628 Pfam:PF05964 Pfam:PF05965 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543 SMART:SM00249
SMART:SM00317 SMART:SM00541 SMART:SM00542 GO:GO:0005634
GO:GO:0009792 GO:GO:0006898 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0016246 GO:GO:0046872
GO:GO:0008270 GO:GO:0010171 GO:GO:0040017 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0040027
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868 GO:GO:0042800
GeneTree:ENSGT00690000101661 PANTHER:PTHR22884:SF10 EMBL:Z81120
EMBL:Z82094 RefSeq:NP_499819.3 ProteinModelPortal:G5EGI1 SMR:G5EGI1
EnsemblMetazoa:T12D8.1 GeneID:176802 KEGG:cel:CELE_T12D8.1
CTD:176802 WormBase:T12D8.1 OMA:QLEDAYP Uniprot:G5EGI1
Length = 2475
Score = 147 (56.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 46 KAHYAVVERG--DYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLC 103
K + AVV RG CE CG+G LLLCD+CD +H+ C++P++ ++P G W C
Sbjct: 462 KLNSAVVGRGWRCLDCTVCEGCGTGGDEANLLLCDECDVSYHIYCMKPLLDKIPQGPWRC 521
Query: 104 PKCSGQRR 111
CS RR
Sbjct: 522 QWCSRCRR 529
Score = 39 (18.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 29/103 (28%), Positives = 43/103 (41%)
Query: 203 PRSANQAEFEEGGMQVLSKEDTETLEQCRAMCKRGEC----PPLVVV----YDSCEGFTV 254
PR QA EE S ED++ ++ R +R + PP + + EG V
Sbjct: 710 PRHRIQALTEEAAAAAASSEDSKQAKRPRKS-RRSQLEDAYPPQIQEAFFGIKAVEG-KV 767
Query: 255 EADGQIKDMTFIAEYIGDVDFIRNREHDDCDSMMTL--LLATD 295
D + D F+AE+ G + R R + MT +L TD
Sbjct: 768 LVDTPV-DEPFLAEFNGW--YKRTRSTKAFELCMTASEMLRTD 807
>TAIR|locus:2096672 [details] [associations]
symbol:MBD9 "methyl-CPG-binding domain 9" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008327 "methyl-CpG binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0010223 "secondary shoot
formation" evidence=IMP] [GO:0043966 "histone H3 acetylation"
evidence=IMP] [GO:0043967 "histone H4 acetylation" evidence=IMP]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0004402
"histone acetyltransferase activity" evidence=IDA] [GO:0016573
"histone acetylation" evidence=IDA] [GO:0042393 "histone binding"
evidence=IPI] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0007155
"cell adhesion" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0071555 "cell wall
organization" evidence=RCA] InterPro:IPR001841 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR016177 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01429
Pfam:PF05964 Pfam:PF05965 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50302 PROSITE:PS50982 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0009506 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
SUPFAM:SSF54171 GO:GO:0043967 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0048573 EMBL:AC009325 PROSITE:PS00633
GO:GO:0010223 GO:GO:0043966 GO:GO:0004402 GO:GO:0008327
EMBL:AC010870 eggNOG:NOG79337 UniGene:At.41275 UniGene:At.47815
HSSP:Q14839 IPI:IPI00538023 RefSeq:NP_186795.1
ProteinModelPortal:Q9SGH2 SMR:Q9SGH2 PaxDb:Q9SGH2 PRIDE:Q9SGH2
EnsemblPlants:AT3G01460.1 GeneID:821132 KEGG:ath:AT3G01460
TAIR:At3g01460 HOGENOM:HOG000153462 InParanoid:Q9SGH2 OMA:GTRIRKC
PhylomeDB:Q9SGH2 ProtClustDB:CLSN2684998 Genevestigator:Q9SGH2
Uniprot:Q9SGH2
Length = 2176
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 59 DVG-CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRV 112
D G C+ CG + + +LLCD CD +H CL P ++R+P G W CP C +R+
Sbjct: 1286 DEGVCKVCGVDKDDDSVLLCDTCDAEYHTYCLNPPLIRIPDGNWYCPSCVIAKRM 1340
Score = 132 (51.5 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 30/100 (30%), Positives = 47/100 (47%)
Query: 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC-SGQRRVRSFS- 116
D C CG E E +++CD C++GFHM C+ V P W+C C +G R + +
Sbjct: 83 DASCGACGRPESIELVVVCDACERGFHMSCVNDGVEAAPSADWMCSDCRTGGERSKLWPL 142
Query: 117 --QRKIIDFFKIKKPNLTEEK-CDSPQDTRKRRRRSASLV 153
+ K+I P+ E + D+RK S+S +
Sbjct: 143 GVKSKLILDMNASPPSDAEGYGAEETSDSRKHMLASSSCI 182
>UNIPROTKB|J9P3J2 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136
GeneTree:ENSGT00660000095335 EMBL:AAEX03004244 EMBL:AAEX03004243
Ensembl:ENSCAFT00000046112 Uniprot:J9P3J2
Length = 1392
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C+ C ++L+LCD+C+K FH+ CLRP + VP G W CP C
Sbjct: 1096 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1140
>UNIPROTKB|I3L9M6 [details] [associations]
symbol:BAZ2A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 SMART:SM00384 SMART:SM00391 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 SUPFAM:SSF54171
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:CU468457
Ensembl:ENSSSCT00000032195 Uniprot:I3L9M6
Length = 1750
Score = 137 (53.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 33/104 (31%), Positives = 47/104 (45%)
Query: 44 LAKAHYAVVERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLC 103
LA+ ++ V C C G+ E LLLCD CD+G H+ C RP + VP G W C
Sbjct: 1507 LAQLERSIAWEKSVNKVTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFC 1566
Query: 104 PKCSGQRRVRSFSQRKIIDFFKIKKPNLTEEKCDSPQDTRKRRR 147
C Q+ +Q+ F K + + P+ +RRR
Sbjct: 1567 AVCLSQQVEGELTQKP--GFPKRGQKRKSSYMLTFPEGDGRRRR 1608
>UNIPROTKB|G3V661 [details] [associations]
symbol:Baz1b "Bromodomain adjacent to zinc finger domain
protein 1B" species:10116 "Rattus norvegicus" [GO:0000793
"condensed chromosome" evidence=IEA] [GO:0003007 "heart
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004713 "protein tyrosine kinase activity"
evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0032947 "protein complex scaffold" evidence=IEA] [GO:0034725
"DNA replication-dependent nucleosome disassembly" evidence=IEA]
[GO:0035173 "histone kinase activity" evidence=IEA] [GO:0042809
"vitamin D receptor binding" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=IEA]
[GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071884 "vitamin D
receptor activator activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184 SMART:SM00249
SMART:SM00297 RGD:1597089 GO:GO:0046872 GO:GO:0008270 EMBL:CH473973
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 CTD:9031 KO:K11658
OMA:CNKAFHL EMBL:AC090529 RefSeq:NP_001178845.1 UniGene:Rn.7043
Ensembl:ENSRNOT00000001975 GeneID:368002 KEGG:rno:368002
NextBio:691979 Uniprot:G3V661
Length = 1476
Score = 136 (52.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C+ C ++L+LCD+C+K FH+ CLRP + VP G W CP C
Sbjct: 1184 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1228
>MGI|MGI:1353499 [details] [associations]
symbol:Baz1b "bromodomain adjacent to zinc finger domain,
1B" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000793 "condensed chromosome" evidence=IDA]
[GO:0003007 "heart morphogenesis" evidence=IMP] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0004713 "protein tyrosine
kinase activity" evidence=ISO] [GO:0004715 "non-membrane spanning
protein tyrosine kinase activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005721
"centromeric heterochromatin" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0006333 "chromatin
assembly or disassembly" evidence=IDA] [GO:0006337 "nucleosome
disassembly" evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016572 "histone
phosphorylation" evidence=ISO] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0032947 "protein complex scaffold" evidence=ISO]
[GO:0034725 "DNA replication-dependent nucleosome disassembly"
evidence=ISO] [GO:0035173 "histone kinase activity" evidence=ISO]
[GO:0042393 "histone binding" evidence=IPI] [GO:0042809 "vitamin D
receptor binding" evidence=ISO] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048096 "chromatin-mediated maintenance of
transcription" evidence=IMP] [GO:0070577 "histone acetyl-lysine
binding" evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
[GO:0071884 "vitamin D receptor activator activity"
evidence=ISO;IMP] InterPro:IPR001841 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00297 MGI:MGI:1353499 GO:GO:0005524
GO:GO:0046872 GO:GO:0003007 GO:GO:0008270 EMBL:CH466529
GO:GO:0006351 GO:GO:0003682 GO:GO:0004715 GO:GO:0004713
GO:GO:0043596 GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006302 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005721 GO:GO:0000793 GO:GO:0048096
GO:GO:0016585 GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
InterPro:IPR018500 InterPro:IPR018501 InterPro:IPR013136
Pfam:PF10537 SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136
GeneTree:ENSGT00660000095335 CTD:9031 HOVERGEN:HBG050668 KO:K11658
OMA:CNKAFHL OrthoDB:EOG4MKNFK ChiTaRS:BAZ1B GO:GO:0071778
GO:GO:0035173 GO:GO:0071884 GO:GO:0034725 EMBL:AF084480
EMBL:BC141399 EMBL:AK017894 EMBL:AK037737 EMBL:AK137139
EMBL:AK140172 EMBL:AK141305 IPI:IPI00923656 IPI:IPI00930843
PIR:T17401 RefSeq:NP_035844.2 UniGene:Mm.40331
ProteinModelPortal:Q9Z277 SMR:Q9Z277 DIP:DIP-36072N IntAct:Q9Z277
STRING:Q9Z277 PhosphoSite:Q9Z277 PaxDb:Q9Z277 PRIDE:Q9Z277
Ensembl:ENSMUST00000002825 GeneID:22385 KEGG:mmu:22385
UCSC:uc008zxz.2 InParanoid:Q3USR7 NextBio:302753 Bgee:Q9Z277
CleanEx:MM_BAZ1B Genevestigator:Q9Z277
GermOnline:ENSMUSG00000002748 Uniprot:Q9Z277
Length = 1479
Score = 136 (52.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C+ C ++L+LCD+C+K FH+ CLRP + VP G W CP C
Sbjct: 1187 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1231
>UNIPROTKB|E2RED7 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 EMBL:AAEX03004244
EMBL:AAEX03004243 Ensembl:ENSCAFT00000020881 Uniprot:E2RED7
Length = 1482
Score = 136 (52.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C+ C ++L+LCD+C+K FH+ CLRP + VP G W CP C
Sbjct: 1186 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1230
>UNIPROTKB|Q9UIG0 [details] [associations]
symbol:BAZ1B "Tyrosine-protein kinase BAZ1B" species:9606
"Homo sapiens" [GO:0004715 "non-membrane spanning protein tyrosine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000793 "condensed chromosome" evidence=IEA]
[GO:0005721 "centromeric heterochromatin" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0035173 "histone kinase activity" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IDA] [GO:0016572
"histone phosphorylation" evidence=IDA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IDA] [GO:0032947 "protein
complex scaffold" evidence=IDA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IDA] [GO:0071778 "WINAC complex"
evidence=IDA] [GO:0042809 "vitamin D receptor binding"
evidence=IPI] [GO:0006337 "nucleosome disassembly" evidence=IDA]
[GO:0034725 "DNA replication-dependent nucleosome disassembly"
evidence=IMP] [GO:0071884 "vitamin D receptor activator activity"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=NAS] [GO:0043596 "nuclear replication fork" evidence=IDA]
[GO:0003007 "heart morphogenesis" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=ISS]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0005524 GO:GO:0046872 GO:GO:0003007
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 GO:GO:0004715
GO:GO:0004713 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006302 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005721 GO:GO:0032947 GO:GO:0000793
GO:GO:0048096 GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
InterPro:IPR018500 InterPro:IPR018501 InterPro:IPR013136
Pfam:PF10537 SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136
EMBL:AF084479 EMBL:AF072810 EMBL:AB032253 EMBL:AC005074
EMBL:AC005089 EMBL:CH471200 EMBL:BC065029 EMBL:BC136520
IPI:IPI00069817 IPI:IPI00216695 RefSeq:NP_115784.1
UniGene:Hs.647016 PDB:1F62 PDBsum:1F62 ProteinModelPortal:Q9UIG0
SMR:Q9UIG0 DIP:DIP-35642N IntAct:Q9UIG0 MINT:MINT-1894324
STRING:Q9UIG0 PhosphoSite:Q9UIG0 DMDM:22653670 PaxDb:Q9UIG0
PRIDE:Q9UIG0 Ensembl:ENST00000339594 Ensembl:ENST00000404251
Ensembl:ENST00000573731 Ensembl:ENST00000575505 GeneID:9031
KEGG:hsa:9031 UCSC:uc003tyc.3 CTD:9031 GeneCards:GC07M072854
HGNC:HGNC:961 HPA:CAB037158 MIM:605681 neXtProt:NX_Q9UIG0
Orphanet:904 PharmGKB:PA25271 HOVERGEN:HBG050668 InParanoid:Q9UIG0
KO:K11658 OMA:CNKAFHL OrthoDB:EOG4MKNFK PhylomeDB:Q9UIG0
ChiTaRS:BAZ1B EvolutionaryTrace:Q9UIG0 GenomeRNAi:9031
NextBio:33835 Bgee:Q9UIG0 CleanEx:HS_BAZ1B Genevestigator:Q9UIG0
GermOnline:ENSG00000009954 GO:GO:0071778 GO:GO:0035173
GO:GO:0071884 GO:GO:0034725 Uniprot:Q9UIG0
Length = 1483
Score = 136 (52.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C+ C ++L+LCD+C+K FH+ CLRP + VP G W CP C
Sbjct: 1187 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1231
>UNIPROTKB|J9PAU7 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 OMA:CNKAFHL
EMBL:AAEX03004244 EMBL:AAEX03004243 Ensembl:ENSCAFT00000046458
Uniprot:J9PAU7
Length = 1485
Score = 136 (52.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C+ C ++L+LCD+C+K FH+ CLRP + VP G W CP C
Sbjct: 1189 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1233
>UNIPROTKB|J3QK86 [details] [associations]
symbol:BAZ2A "Bromodomain adjacent to zinc finger domain
protein 2A" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01429
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982
SMART:SM00249 SMART:SM00297 SMART:SM00384 SMART:SM00391
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
EMBL:CH471054 SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 EMBL:AC090681
UniGene:Hs.314263 HGNC:HGNC:962 ChiTaRS:BAZ2A Gene3D:3.30.890.10
ProteinModelPortal:J3QK86 Ensembl:ENST00000179765 PhylomeDB:J3QK86
Uniprot:J3QK86
Length = 1873
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/59 (44%), Positives = 33/59 (55%)
Query: 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQR 118
V C C G+ E LLLCD CD+G H+ C RP + VP G W C C Q+ F+Q+
Sbjct: 1645 VTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCTVCLAQQVEGEFTQK 1703
>MGI|MGI:1338889 [details] [associations]
symbol:Uhrf1 "ubiquitin-like, containing PHD and RING finger
domains, 1" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0000790 "nuclear chromatin" evidence=ISO;IDA]
[GO:0000791 "euchromatin" evidence=ISO] [GO:0000792
"heterochromatin" evidence=ISO;IDA] [GO:0000987 "core promoter
proximal region sequence-specific DNA binding" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA;TAS] [GO:0005657 "replication fork"
evidence=ISO;IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0008283 "cell proliferation"
evidence=TAS] [GO:0008327 "methyl-CpG binding" evidence=ISO]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO;IMP]
[GO:0010390 "histone monoubiquitination" evidence=IDA] [GO:0016363
"nuclear matrix" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031493
"nucleosomal histone binding" evidence=IDA] [GO:0032270 "positive
regulation of cellular protein metabolic process" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO;IDA]
[GO:0042393 "histone binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISO;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051865 "protein autoubiquitination" evidence=ISO]
InterPro:IPR001841 InterPro:IPR000626 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628
Pfam:PF02182 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015
SMART:SM00184 SMART:SM00213 SMART:SM00249 SMART:SM00466
UniPathway:UPA00143 MGI:MGI:1338889 Prosite:PS00299 Prosite:PS00518
GO:GO:0046872 GO:GO:0008283 GO:GO:0008270 GO:GO:0006281
GO:GO:0006351 GO:GO:0000122 GO:GO:0007049 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842 GO:GO:0016363
GO:GO:0035064 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907
GO:GO:0042787 GO:GO:0051865 GO:GO:0000792 GO:GO:0005657
GO:GO:0010390 GO:GO:0031493 GO:GO:0010216 Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0000791 eggNOG:COG3440 KO:K10638
Gene3D:2.30.280.10 CTD:29128 GeneTree:ENSGT00390000008296
HOGENOM:HOG000124662 HOVERGEN:HBG059298 OMA:HVEPGLQ GO:GO:0044729
InterPro:IPR021991 Pfam:PF12148 OrthoDB:EOG408N7M EMBL:D87908
EMBL:AF274046 EMBL:AK075819 EMBL:AK143688 EMBL:AK145376
EMBL:AK145543 EMBL:AK146951 EMBL:AK147046 EMBL:AK150489
EMBL:AK151701 EMBL:AK151837 EMBL:AK152930 EMBL:AK153083
EMBL:AC026385 EMBL:BC022167 EMBL:AB066246 IPI:IPI00130200
RefSeq:NP_001104548.1 RefSeq:NP_001104549.1 RefSeq:NP_001104550.1
RefSeq:NP_035061.3 UniGene:Mm.42196 PDB:2ZKD PDB:2ZKE PDB:2ZKF
PDB:2ZKG PDB:2ZO0 PDB:2ZO1 PDB:2ZO2 PDB:3F8I PDB:3F8J PDB:3FDE
PDBsum:2ZKD PDBsum:2ZKE PDBsum:2ZKF PDBsum:2ZKG PDBsum:2ZO0
PDBsum:2ZO1 PDBsum:2ZO2 PDBsum:3F8I PDBsum:3F8J PDBsum:3FDE
ProteinModelPortal:Q8VDF2 SMR:Q8VDF2 MINT:MINT-1172910
STRING:Q8VDF2 PhosphoSite:Q8VDF2 REPRODUCTION-2DPAGE:Q8VDF2
PRIDE:Q8VDF2 Ensembl:ENSMUST00000001258 Ensembl:ENSMUST00000113035
Ensembl:ENSMUST00000113038 Ensembl:ENSMUST00000113039 GeneID:18140
KEGG:mmu:18140 InParanoid:Q8VDF2 EvolutionaryTrace:Q8VDF2
NextBio:293384 Bgee:Q8VDF2 Genevestigator:Q8VDF2
GermOnline:ENSMUSG00000001228 Uniprot:Q8VDF2
Length = 782
Score = 129 (50.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGT-WLCPKC 106
C CG E E+ LLCD+CD FH+ CL+P + VP W CP C
Sbjct: 323 CHVCGGREAPEKQLLCDECDMAFHLYCLKPPLTSVPPEPEWYCPSC 368
Score = 47 (21.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 127 KKPNLTEEKCDSPQDTRKRRRRSASLVLQK----KRRRLLPFTPSEDRSQRLSQ 176
K+P E+ S T K +++S L K+ +L P+T SE ++ + +
Sbjct: 627 KRPAKALEQGPSSSKTGKSKQKSTGPTLSSPRASKKSKLEPYTLSEQQANLIKE 680
>UNIPROTKB|J3KPG5 [details] [associations]
symbol:BAZ2A "Bromodomain adjacent to zinc finger domain
protein 2A" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01429
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982
SMART:SM00249 SMART:SM00297 SMART:SM00384 SMART:SM00391
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 EMBL:AC090681
HGNC:HGNC:962 ChiTaRS:BAZ2A Gene3D:3.30.890.10
Ensembl:ENST00000379441 Uniprot:J3KPG5
Length = 1875
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/59 (44%), Positives = 33/59 (55%)
Query: 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQR 118
V C C G+ E LLLCD CD+G H+ C RP + VP G W C C Q+ F+Q+
Sbjct: 1647 VTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCTVCLAQQVEGEFTQK 1705
>UNIPROTKB|F8VU39 [details] [associations]
symbol:BAZ2A "Bromodomain adjacent to zinc finger domain
protein 2A" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0034770 "histone H4-K20 methylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0070869
"heterochromatin assembly involved in chromatin silencing"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 SMART:SM00384 SMART:SM00391 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003723
SUPFAM:SSF54171 GO:GO:0000183 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0051567 GO:GO:0016585
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
EMBL:AC090681 IPI:IPI00759742 HGNC:HGNC:962 ChiTaRS:BAZ2A
GO:GO:0070869 GO:GO:0070933 GO:GO:0034770 Gene3D:3.30.890.10
PRIDE:F8VU39 Ensembl:ENST00000549884 ArrayExpress:F8VU39
Bgee:F8VU39 Uniprot:F8VU39
Length = 1903
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/59 (44%), Positives = 33/59 (55%)
Query: 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQR 118
V C C G+ E LLLCD CD+G H+ C RP + VP G W C C Q+ F+Q+
Sbjct: 1675 VTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCTVCLAQQVEGEFTQK 1733
>UNIPROTKB|Q9UIF9 [details] [associations]
symbol:BAZ2A "Bromodomain adjacent to zinc finger domain
protein 2A" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0034770 "histone H4-K20 methylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0070869
"heterochromatin assembly involved in chromatin silencing"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006351 "transcription, DNA-dependent"
evidence=NAS] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0016575 "histone deacetylation" evidence=ISS] [GO:0070577
"histone acetyl-lysine binding" evidence=ISS] [GO:0005677
"chromatin silencing complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0006306 "DNA methylation" evidence=ISS]
[GO:0033553 "rDNA heterochromatin" evidence=ISS] [GO:0003723 "RNA
binding" evidence=ISS] [GO:0000183 "chromatin silencing at rDNA"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016922 "ligand-dependent nuclear receptor binding"
evidence=NAS] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01429
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982
SMART:SM00249 SMART:SM00297 SMART:SM00384 SMART:SM00391
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0003723 GO:GO:0006338 SUPFAM:SSF54171
GO:GO:0000183 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0006306
GO:GO:0051567 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359 GO:GO:0005677
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 EMBL:AB032254
EMBL:CR749379 EMBL:AC090681 EMBL:AB002312 EMBL:AK023830
EMBL:AF000422 EMBL:BC008965 IPI:IPI00296388 IPI:IPI00759742
IPI:IPI00943770 RefSeq:NP_038477.2 UniGene:Hs.314263
ProteinModelPortal:Q9UIF9 SMR:Q9UIF9 IntAct:Q9UIF9
MINT:MINT-7240976 STRING:Q9UIF9 PhosphoSite:Q9UIF9 DMDM:257051081
PaxDb:Q9UIF9 PRIDE:Q9UIF9 DNASU:11176 Ensembl:ENST00000549787
Ensembl:ENST00000551812 GeneID:11176 KEGG:hsa:11176 UCSC:uc001slp.1
UCSC:uc009zow.1 CTD:11176 GeneCards:GC12M056954 H-InvDB:HIX0010736
HGNC:HGNC:962 HPA:HPA005782 MIM:605682 neXtProt:NX_Q9UIF9
PharmGKB:PA25272 HOGENOM:HOG000169644 HOVERGEN:HBG107494 KO:K15224
OMA:WIVEGRL OrthoDB:EOG44QT05 ChiTaRS:BAZ2A GenomeRNAi:11176
NextBio:42525 ArrayExpress:Q9UIF9 Bgee:Q9UIF9 CleanEx:HS_BAZ2A
Genevestigator:Q9UIF9 GermOnline:ENSG00000076108 GO:GO:0033553
GO:GO:0016922 GO:GO:0070869 GO:GO:0016575 GO:GO:0070933
GO:GO:0034770 Gene3D:3.30.890.10 Uniprot:Q9UIF9
Length = 1905
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/59 (44%), Positives = 33/59 (55%)
Query: 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQR 118
V C C G+ E LLLCD CD+G H+ C RP + VP G W C C Q+ F+Q+
Sbjct: 1677 VTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCTVCLAQQVEGEFTQK 1735
>UNIPROTKB|F1S4N3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0034647 OMA:CENEKEM
EMBL:CU986276 Ensembl:ENSSSCT00000011960 Uniprot:F1S4N3
Length = 1304
Score = 139 (54.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 25/48 (52%), Positives = 28/48 (58%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
C CGSG + LLLCD CD +H CL P + VP G W CPKC Q
Sbjct: 311 CLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQ 358
Score = 41 (19.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 33/145 (22%), Positives = 52/145 (35%)
Query: 102 LCPKCS-GQRRVRSFSQRKIIDFFKI-KKPNLTEEKCDSPQDTRKRRRRSASLVLQKKRR 159
LCP+C G ++ QRK+ + +K + E + R +AS +
Sbjct: 1089 LCPRCDVGLLGLKR-KQRKLKEPLPSGRKKSPRVESLSDLERALMESRETASAMATLGEA 1147
Query: 160 RLLPFTPSEDRSQRLSQMGSLAHALTALQME--FSDDLTYMPGMAPRSANQAEFEEGGMQ 217
RL + S RL+ G L + + M+ P + A F +
Sbjct: 1148 RLREMEALQ--SLRLANEGKLLSPVQDVDMKVCLCQKAPAAPMIQCELCRDA-FHTSCVA 1204
Query: 218 VLSKEDTETLEQCRAMCKRGECPPL 242
V S + C C+R E PPL
Sbjct: 1205 VPSISQGPRIWLC-PHCRRSEKPPL 1228
>UNIPROTKB|F1SLA2 [details] [associations]
symbol:BAZ2A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070869 "heterochromatin assembly involved in chromatin
silencing" evidence=IEA] [GO:0051567 "histone H3-K9 methylation"
evidence=IEA] [GO:0034770 "histone H4-K20 methylation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001739 InterPro:IPR001965 InterPro:IPR016177
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01429 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00297 SMART:SM00384
SMART:SM00391 GO:GO:0005730 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 SUPFAM:SSF54171 GO:GO:0000183
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0051567 GO:GO:0016585 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 OMA:WIVEGRL GO:GO:0070869
GO:GO:0070933 GO:GO:0034770 Gene3D:3.30.890.10 EMBL:CU468457
Ensembl:ENSSSCT00000000436 Uniprot:F1SLA2
Length = 1923
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 33/104 (31%), Positives = 47/104 (45%)
Query: 44 LAKAHYAVVERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLC 103
LA+ ++ V C C G+ E LLLCD CD+G H+ C RP + VP G W C
Sbjct: 1680 LAQLERSIAWEKSVNKVTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFC 1739
Query: 104 PKCSGQRRVRSFSQRKIIDFFKIKKPNLTEEKCDSPQDTRKRRR 147
C Q+ +Q+ F K + + P+ +RRR
Sbjct: 1740 AVCLSQQVEGELTQKP--GFPKRGQKRKSSYMLTFPEGDGRRRR 1781
>UNIPROTKB|Q30DN6 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 EMBL:DQ156494 RefSeq:NP_001106929.1 UniGene:Cfa.38975
ProteinModelPortal:Q30DN6 SMR:Q30DN6 GeneID:100134936
KEGG:cfa:100134936 CTD:8284 NextBio:20789320 Uniprot:Q30DN6
Length = 1545
Score = 134 (52.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C C G+ ++LLLCD CD +H+ CL P + +P G W CPKC
Sbjct: 320 CRICSRGDEDDKLLLCDGCDDTYHIFCLIPPLPEIPRGVWRCPKC 364
Score = 48 (22.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 260 IKDMTFIAE-YIGDVDFIRNREHDDCDSMMTLLLA 293
+KD A+ +I DVD I+N +H C + L+A
Sbjct: 1012 LKDALAKAQAWIADVDEIQNGDHYPCLDDLECLVA 1046
>UNIPROTKB|F1NP02 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00530000063984 EMBL:AADN02033506
EMBL:AADN02033505 IPI:IPI00680686 Ensembl:ENSGALT00000030514
ArrayExpress:F1NP02 Uniprot:F1NP02
Length = 603
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 58 GDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
GD+ + C ++ +LL+CD C + +H+ CL P + +P G W+CPKC Q
Sbjct: 408 GDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPKCQDQ 459
>FB|FBgn0031759 [details] [associations]
symbol:lid "little imaginal discs" species:7227 "Drosophila
melanogaster" [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IMP] [GO:0043992
"histone acetyltransferase activity (H3-K9 specific)" evidence=IMP]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IMP] [GO:0034720 "histone H3-K4 demethylation"
evidence=IMP] [GO:0043970 "histone H3-K9 acetylation" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0045475 "locomotor rhythm" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0007275 GO:GO:0045893 EMBL:AE014134
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 GO:GO:0045475 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0070822 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 OMA:TEMVERE
EMBL:AY095051 RefSeq:NP_001245908.1 RefSeq:NP_001245909.1
RefSeq:NP_001245910.1 RefSeq:NP_523486.1 RefSeq:NP_723140.1
UniGene:Dm.2779 PDB:2LM1 PDBsum:2LM1 ProteinModelPortal:Q9VMJ7
SMR:Q9VMJ7 DIP:DIP-29330N IntAct:Q9VMJ7 MINT:MINT-1672742
STRING:Q9VMJ7 PaxDb:Q9VMJ7 PRIDE:Q9VMJ7 EnsemblMetazoa:FBtr0079231
EnsemblMetazoa:FBtr0079232 EnsemblMetazoa:FBtr0307069
EnsemblMetazoa:FBtr0307070 EnsemblMetazoa:FBtr0307071 GeneID:33837
KEGG:dme:Dmel_CG9088 CTD:33837 FlyBase:FBgn0031759
InParanoid:Q9VMJ7 OrthoDB:EOG408KPT PhylomeDB:Q9VMJ7
GenomeRNAi:33837 NextBio:785524 Bgee:Q9VMJ7 GO:GO:0043992
Uniprot:Q9VMJ7
Length = 1838
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C C G+ E +LLCD CD +H CL P + +P G WLCP+C
Sbjct: 451 CHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRC 495
>UNIPROTKB|F1NRM1 [details] [associations]
symbol:F1NRM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0045182 "translation regulator
activity" evidence=IEA] InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS51414 SMART:SM00249
GO:GO:0005634 GO:GO:0005737 GO:GO:0006417 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045182 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0006959
GeneTree:ENSGT00440000034278 EMBL:AADN02024441 EMBL:AADN02024442
IPI:IPI01017196 Ensembl:ENSGALT00000041318 ArrayExpress:F1NRM1
Uniprot:F1NRM1
Length = 537
Score = 130 (50.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSG 108
C CG G EL+ CD C + FH+ CL P + RVP G WLC C+G
Sbjct: 427 CAVCGDGG---ELICCDGCPRAFHLPCLVPPLPRVPRGLWLCSSCTG 470
>UNIPROTKB|I3LCE6 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071884 "vitamin D receptor activator activity"
evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA] [GO:0070577
"histone acetyl-lysine binding" evidence=IEA] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=IEA]
[GO:0043596 "nuclear replication fork" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0042809
"vitamin D receptor binding" evidence=IEA] [GO:0035173 "histone
kinase activity" evidence=IEA] [GO:0034725 "DNA
replication-dependent nucleosome disassembly" evidence=IEA]
[GO:0032947 "protein complex scaffold" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0003007 GO:GO:0008270 GO:GO:0003682 GO:GO:0004713
GO:GO:0043596 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006302 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005721 GO:GO:0000793 GO:GO:0048096
GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 OMA:CNKAFHL
GO:GO:0071778 GO:GO:0035173 GO:GO:0071884 GO:GO:0034725
EMBL:FP312931 Ensembl:ENSSSCT00000030732 Uniprot:I3LCE6
Length = 1483
Score = 135 (52.6 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C+ C ++L+LCD+C+K FH+ CLRP + VP G W CP C
Sbjct: 1187 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYAVPDGEWQCPAC 1231
>UNIPROTKB|F1P5P6 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0000122 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0000118
GeneTree:ENSGT00530000063984 EMBL:AADN02033506 EMBL:AADN02033505
IPI:IPI00574652 Ensembl:ENSGALT00000013689 ArrayExpress:F1P5P6
Uniprot:F1P5P6
Length = 651
Score = 131 (51.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 58 GDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
GD+ + C ++ +LL+CD C + +H+ CL P + +P G W+CPKC Q
Sbjct: 456 GDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPKCQDQ 507
>UNIPROTKB|F1M5S0 [details] [associations]
symbol:RGD1560612 "Protein RGD1560612" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00530000063984 IPI:IPI00947688
Ensembl:ENSRNOT00000066219 ArrayExpress:F1M5S0 Uniprot:F1M5S0
Length = 573
Score = 130 (50.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 58 GDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
GD+ + C ++ +LL+CD C + +H+ CL P + +P G W+CP+C Q
Sbjct: 378 GDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRCQDQ 429
>RGD|1560612 [details] [associations]
symbol:Phf21a "PHD finger protein 21A" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0001967
"suckling behavior" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
RGD:1560612 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
GeneTree:ENSGT00530000063984 IPI:IPI00952132
Ensembl:ENSRNOT00000067664 UCSC:RGD:1560612 ArrayExpress:F1M6K4
Uniprot:F1M6K4
Length = 639
Score = 130 (50.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 58 GDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
GD+ + C ++ +LL+CD C + +H+ CL P + +P G W+CP+C Q
Sbjct: 444 GDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRCQDQ 495
>MGI|MGI:2384756 [details] [associations]
symbol:Phf21a "PHD finger protein 21A" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001967 "suckling
behavior" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 MGI:MGI:2384756 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0001967 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 CTD:51317
eggNOG:NOG310379 HOVERGEN:HBG080293 EMBL:AB105178 EMBL:AK129424
EMBL:AK037174 EMBL:BC019181 EMBL:AY206982 IPI:IPI00124469
IPI:IPI00228265 IPI:IPI00453806 IPI:IPI00742280 IPI:IPI00742299
IPI:IPI00742330 IPI:IPI00742344 IPI:IPI00742352 IPI:IPI00742439
RefSeq:NP_001103161.1 RefSeq:NP_620094.2 UniGene:Mm.330408
ProteinModelPortal:Q6ZPK0 SMR:Q6ZPK0 STRING:Q6ZPK0
PhosphoSite:Q6ZPK0 PRIDE:Q6ZPK0 GeneID:192285 KEGG:mmu:192285
UCSC:uc008kxi.2 HOGENOM:HOG000231466 ChiTaRS:PHF21A NextBio:371282
CleanEx:MM_PHF21A Genevestigator:Q6ZPK0
GermOnline:ENSMUSG00000058318 Uniprot:Q6ZPK0
Length = 659
Score = 130 (50.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 58 GDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
GD+ + C ++ +LL+CD C + +H+ CL P + +P G W+CP+C Q
Sbjct: 464 GDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRCQDQ 515
>UNIPROTKB|H7C2H0 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 HGNC:HGNC:1918 ChiTaRS:CHD3 EMBL:AC104581
GO:GO:0016818 Ensembl:ENST00000452447 Uniprot:H7C2H0
Length = 525
Score = 120 (47.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 56 DYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
D+ D CE C G E++LCD C + +H+ CL P + R P G W CP C
Sbjct: 248 DHQDY-CEVCQQGG---EIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 294
Score = 118 (46.6 bits), Expect = 0.00038, P = 0.00038
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 53 ERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107
E D+ + C C G ELL CD C +H+ CL P + +P G WLCP+C+
Sbjct: 322 EEDDHMEY-CRVCKDGG---ELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 372
Score = 50 (22.7 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 208 QAEFEEGGMQVLSKEDTET-LEQCRAMCKRG 237
+ E+EE G + KE+ + +E CR +CK G
Sbjct: 307 EEEYEEEGEEEGEKEEEDDHMEYCR-VCKDG 336
>UNIPROTKB|E9PFH2 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 HGNC:HGNC:11115 ChiTaRS:KDM5D IPI:IPI00644955
ProteinModelPortal:E9PFH2 SMR:E9PFH2 PRIDE:E9PFH2
Ensembl:ENST00000440077 ArrayExpress:E9PFH2 Bgee:E9PFH2
Uniprot:E9PFH2
Length = 1476
Score = 135 (52.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C+ C G+ ++LL CD CD +H+ CL P + +P G W CPKC
Sbjct: 276 CQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKC 320
Score = 44 (20.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 263 MTFIAEYIGDVDFIRNREHDDC 284
+T +I DVD I+N +H C
Sbjct: 972 LTKAQAWIADVDEIQNGDHYPC 993
>UNIPROTKB|F1NN75 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:AADN02006480
IPI:IPI00571489 Ensembl:ENSGALT00000021199 Uniprot:F1NN75
Length = 1696
Score = 134 (52.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 23/45 (51%), Positives = 27/45 (60%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG G ++LLLCD CD +H CL P + VP G W CPKC
Sbjct: 299 CLFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKC 343
>UNIPROTKB|Q9BY66 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0007283 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 DrugBank:DB00126
Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:CH471202 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:U52191 EMBL:D87072 EMBL:AF273841 EMBL:AC010889
EMBL:BC132721 EMBL:BC144102 EMBL:BC146767 EMBL:U52365 EMBL:AF134849
IPI:IPI00219940 IPI:IPI00329577 IPI:IPI00922879
RefSeq:NP_001140177.1 RefSeq:NP_001140178.1 RefSeq:NP_004644.2
UniGene:Hs.80358 PDB:2E6R PDB:2YQE PDBsum:2E6R PDBsum:2YQE
ProteinModelPortal:Q9BY66 SMR:Q9BY66 IntAct:Q9BY66 STRING:Q9BY66
PhosphoSite:Q9BY66 DMDM:17368706 PaxDb:Q9BY66 PRIDE:Q9BY66
Ensembl:ENST00000317961 Ensembl:ENST00000382806
Ensembl:ENST00000541639 GeneID:8284 KEGG:hsa:8284 UCSC:uc004fug.3
UCSC:uc010nwy.3 GeneCards:GC0YM021865 HGNC:HGNC:11115 MIM:426000
neXtProt:NX_Q9BY66 PharmGKB:PA35965 InParanoid:Q9BY66 OMA:TEMVERE
PhylomeDB:Q9BY66 ChiTaRS:KDM5D EvolutionaryTrace:Q9BY66
GenomeRNAi:8284 NextBio:31049 ArrayExpress:Q9BY66 Bgee:Q9BY66
CleanEx:HS_JARID1D Genevestigator:Q9BY66 GermOnline:ENSG00000012817
Uniprot:Q9BY66
Length = 1539
Score = 135 (52.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C+ C G+ ++LL CD CD +H+ CL P + +P G W CPKC
Sbjct: 317 CQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKC 361
Score = 44 (20.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 263 MTFIAEYIGDVDFIRNREHDDC 284
+T +I DVD I+N +H C
Sbjct: 1013 LTKAQAWIADVDEIQNGDHYPC 1034
>UNIPROTKB|F1MUR2 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:DAAA02043305 IPI:IPI01001710
Ensembl:ENSBTAT00000028871 Uniprot:F1MUR2
Length = 1484
Score = 139 (54.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 25/48 (52%), Positives = 28/48 (58%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
C CGSG + LLLCD CD +H CL P + VP G W CPKC Q
Sbjct: 252 CLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQ 299
Score = 39 (18.8 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 24/106 (22%), Positives = 46/106 (43%)
Query: 141 DTRKRRRRSASLVLQKKRRRLLPFTPSEDRSQRLSQMGS-------LAHALTALQMEFSD 193
D + +R AS + K +RRL S +R R+++M + L+H ++
Sbjct: 1334 DGCRGKRDGASSLESKLKRRLEREGLSSERWDRITKMRAPKKKRIKLSHPKDTDSLKLER 1393
Query: 194 DLTYMPGMAPRSANQAEFEEGGMQVLSKEDTETLEQCRAMCKRGEC 239
+ +Y +AP + Q+ + +ED+E + A+C C
Sbjct: 1394 ECSYE--LAPSADTQSLPSDSSSS--EQEDSEDED---AICPAVSC 1432
>UNIPROTKB|I3LDB0 [details] [associations]
symbol:I3LDB0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0001967
"suckling behavior" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:SCTVNCN
GeneTree:ENSGT00530000063984 EMBL:FP101987
Ensembl:ENSSSCT00000023373 Uniprot:I3LDB0
Length = 563
Score = 128 (50.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 58 GDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
GD+ + C ++ +LL+CD C + +H+ CL P + +P G W+CP+C Q
Sbjct: 364 GDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 415
>UNIPROTKB|Q8WML3 [details] [associations]
symbol:KAT6B "Histone acetyltransferase KAT6B" species:9541
"Macaca fascicularis" [GO:0004402 "histone acetyltransferase
activity" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0016407 "acetyltransferase activity"
evidence=ISS] [GO:0016573 "histone acetylation" evidence=ISS]
[GO:0043966 "histone H3 acetylation" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0070776 "MOZ/MORF histone acetyltransferase
complex" evidence=ISS] InterPro:IPR001965 InterPro:IPR002717
InterPro:IPR005818 InterPro:IPR019787 Pfam:PF00538 Pfam:PF00628
Pfam:PF01853 PROSITE:PS50016 PROSITE:PS51504 SMART:SM00249
SMART:SM00526 GO:GO:0045892 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0008134 GO:GO:0006334
GO:GO:0000786 GO:GO:0070776 GO:GO:0043966 GO:GO:0004402
HOVERGEN:HBG052563 EMBL:AB061870 ProteinModelPortal:Q8WML3
SMR:Q8WML3 Uniprot:Q8WML3
Length = 1784
Score = 141 (54.7 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 62 CEQCG-SGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
C C G A+ +L CD CD+GFHM+C P + R+P G W+C C +++ R K
Sbjct: 272 CSACRVQGRNADNMLFCDSCDRGFHMECCDPPLSRMPKGMWICQVCRPKKKGRKLLHEK 330
Score = 38 (18.4 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 30/111 (27%), Positives = 44/111 (39%)
Query: 130 NLTEEKCDSPQDTR------KRRRRSASLVLQKKRRR----LLPFTPSEDRSQRLSQMGS 179
NL E D+P+ + K +R S Q K R+ L +TP E + Q+
Sbjct: 944 NLKEGSKDNPEPLKCKQAWPKGTKRGLSKWRQNKERKTGFKLNLYTPPETPLEPDEQV-- 1001
Query: 180 LAHALTALQMEFSDDLTYMPGMAPRSANQAEFEEGGMQVLSKEDTETLEQC 230
Q E S+ T P P S + E +E G +L +E+ E C
Sbjct: 1002 ----TVEEQKETSEGKT-SP--TPISIEE-EAKEAGEALLPQEENRRQETC 1044
>UNIPROTKB|F1MS13 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0001967
"suckling behavior" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0001967
GO:GO:0003682 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0000118 OMA:SCTVNCN
GeneTree:ENSGT00530000063984 EMBL:DAAA02041566 EMBL:DAAA02041567
IPI:IPI00716921 Ensembl:ENSBTAT00000012652 Uniprot:F1MS13
Length = 631
Score = 128 (50.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 58 GDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
GD+ + C ++ +LL+CD C + +H+ CL P + +P G W+CP+C Q
Sbjct: 432 GDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 483
>UNIPROTKB|F1PJS3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00530000063118 OMA:CENEKEM EMBL:AAEX03004965
Ensembl:ENSCAFT00000016655 Uniprot:F1PJS3
Length = 1476
Score = 139 (54.0 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 25/48 (52%), Positives = 28/48 (58%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
C CGSG + LLLCD CD +H CL P + VP G W CPKC Q
Sbjct: 244 CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQ 291
Score = 38 (18.4 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 32/145 (22%), Positives = 52/145 (35%)
Query: 102 LCPKCS-GQRRVRSFSQRKIIDFFKIKKPNLTE-EKCDSPQDTRKRRRRSASLVLQKKRR 159
LCP+C G ++ QRK + K T+ E + + +AS +
Sbjct: 1022 LCPRCDIGLWGLKR-KQRKFKEPLPSGKKKSTKLESLSDLERALSESKETASAMATLGEA 1080
Query: 160 RLLPFTPSEDRSQRLSQMGSLAHALTALQME--FSDDLTYMPGMAPRSANQAEFEEGGMQ 217
RL + S RL+ G L + ++++ P + A F +
Sbjct: 1081 RLREMEALQ--SFRLANEGKLLSPVQDVELKVCLCQKAPAAPMIQCELCRDA-FHTSCVV 1137
Query: 218 VLSKEDTETLEQCRAMCKRGECPPL 242
V S + C C+R E PPL
Sbjct: 1138 VPSISQGPRIWLC-PHCRRSEKPPL 1161
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 133 (51.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 26/67 (38%), Positives = 35/67 (52%)
Query: 41 EEILAKAHYAVVERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGT 100
EEIL + + E D+ C C G ELL CD C +H+ CL P + +P G
Sbjct: 424 EEILEEVGGDLEEEDDHHMEFCRVCKDGG---ELLCCDTCPSSYHIHCLNPPLPEIPNGE 480
Query: 101 WLCPKCS 107
WLCP+C+
Sbjct: 481 WLCPRCT 487
Score = 127 (49.8 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 31/91 (34%), Positives = 41/91 (45%)
Query: 16 GSRRRTEAPRRMLXXXXXXXXXXXMEEILAKAHYAVVERGDYGDVGCEQCGSGERAEELL 75
GS R+ R+ L EE+ A Y + DY CE C G E++
Sbjct: 327 GSTSRSSRSRKKLRTTKKKKKGE--EEVTAVDGYET-DHQDY----CEVCQQGG---EII 376
Query: 76 LCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
LCD C + +HM CL P + + P G W CP C
Sbjct: 377 LCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 407
Score = 43 (20.2 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 205 SANQAEFEEGGMQVLSKEDTETLEQCRAMCKRG 237
S + EE G L +ED +E CR +CK G
Sbjct: 421 SEGEEILEEVGGD-LEEEDDHHMEFCR-VCKDG 451
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 133 (51.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 26/67 (38%), Positives = 35/67 (52%)
Query: 41 EEILAKAHYAVVERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGT 100
EEIL + + E D+ C C G ELL CD C +H+ CL P + +P G
Sbjct: 431 EEILEEVGGDLEEEDDHHMEFCRVCKDGG---ELLCCDTCPSSYHIHCLNPPLPEIPNGE 487
Query: 101 WLCPKCS 107
WLCP+C+
Sbjct: 488 WLCPRCT 494
Score = 127 (49.8 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 31/91 (34%), Positives = 41/91 (45%)
Query: 16 GSRRRTEAPRRMLXXXXXXXXXXXMEEILAKAHYAVVERGDYGDVGCEQCGSGERAEELL 75
GS R+ R+ L EE+ A Y + DY CE C G E++
Sbjct: 334 GSTSRSSRSRKKLRTTKKKKKGE--EEVTAVDGYET-DHQDY----CEVCQQGG---EII 383
Query: 76 LCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
LCD C + +HM CL P + + P G W CP C
Sbjct: 384 LCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 414
Score = 43 (20.2 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 205 SANQAEFEEGGMQVLSKEDTETLEQCRAMCKRG 237
S + EE G L +ED +E CR +CK G
Sbjct: 428 SEGEEILEEVGGD-LEEEDDHHMEFCR-VCKDG 458
>UNIPROTKB|F1PQV6 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:SCTVNCN GeneTree:ENSGT00530000063984
EMBL:AAEX03011503 EMBL:AAEX03011502 Ensembl:ENSCAFT00000014853
Uniprot:F1PQV6
Length = 680
Score = 128 (50.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 58 GDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
GD+ + C ++ +LL+CD C + +H+ CL P + +P G W+CP+C Q
Sbjct: 484 GDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 535
>UNIPROTKB|Q96BD5 [details] [associations]
symbol:PHF21A "PHD finger protein 21A" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] Reactome:REACT_604
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016
SMART:SM00184 SMART:SM00249 SMART:SM00384 EMBL:CH471064
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0007596
GO:GO:0008270 GO:GO:0001967 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0000118 EMBL:AY090777 EMBL:AB051483
EMBL:AK021530 EMBL:AK023258 EMBL:BC015714 EMBL:BX648236
EMBL:AF208848 IPI:IPI00041959 IPI:IPI00054460 IPI:IPI00737174
RefSeq:NP_001095272.1 RefSeq:NP_057705.3 UniGene:Hs.502458 PDB:2PUY
PDB:2YQL PDBsum:2PUY PDBsum:2YQL ProteinModelPortal:Q96BD5
SMR:Q96BD5 IntAct:Q96BD5 MINT:MINT-1469147 STRING:Q96BD5
PhosphoSite:Q96BD5 DMDM:74731224 PaxDb:Q96BD5 PRIDE:Q96BD5
DNASU:51317 Ensembl:ENST00000257821 Ensembl:ENST00000323180
Ensembl:ENST00000418153 GeneID:51317 KEGG:hsa:51317 UCSC:uc001ncb.4
UCSC:uc001ncc.4 UCSC:uc001nce.2 CTD:51317 GeneCards:GC11M045950
HGNC:HGNC:24156 HPA:HPA023580 MIM:608325 neXtProt:NX_Q96BD5
PharmGKB:PA134977844 eggNOG:NOG310379 HOVERGEN:HBG080293
InParanoid:Q96BD5 OMA:SCTVNCN OrthoDB:EOG4KWJSH PhylomeDB:Q96BD5
EvolutionaryTrace:Q96BD5 GenomeRNAi:51317 NextBio:54681
ArrayExpress:Q96BD5 Bgee:Q96BD5 CleanEx:HS_PHF21A
Genevestigator:Q96BD5 GermOnline:ENSG00000135365 Uniprot:Q96BD5
Length = 680
Score = 128 (50.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 58 GDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
GD+ + C ++ +LL+CD C + +H+ CL P + +P G W+CP+C Q
Sbjct: 484 GDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 535
>UNIPROTKB|F1LPP8 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 RGD:1311923 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 GO:GO:0016818 IPI:IPI00779114
Ensembl:ENSRNOT00000057058 ArrayExpress:F1LPP8 Uniprot:F1LPP8
Length = 710
Score = 120 (47.3 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 56 DYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
D+ D CE C G E++LCD C + +H+ CL P + R P G W CP C
Sbjct: 391 DHQDY-CEVCQQGG---EIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 437
Score = 118 (46.6 bits), Expect = 0.00058, P = 0.00058
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 53 ERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107
E D+ + C C G ELL CD C +H+ CL P + +P G WLCP+C+
Sbjct: 464 EEDDHMEY-CRVCKDGG---ELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 514
Score = 51 (23.0 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 208 QAEFEEGGMQVLSKEDTETLEQCRAMCKRG 237
+ ++EE G + +E+ + +E CR +CK G
Sbjct: 450 EEDYEEEGEEGEKEEEDDHMEYCR-VCKDG 478
>WB|WBGene00001470 [details] [associations]
symbol:flt-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01429 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00297 SMART:SM00391
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:FO080623
RefSeq:NP_498673.3 ProteinModelPortal:Q23590 SMR:Q23590
PaxDb:Q23590 EnsemblMetazoa:ZK783.4 GeneID:176078
KEGG:cel:CELE_ZK783.4 UCSC:ZK783.4 CTD:176078 WormBase:ZK783.4
HOGENOM:HOG000015886 NextBio:891018 Uniprot:Q23590
Length = 1390
Score = 131 (51.2 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVR 113
C+ C S + +E+L+CD C+ G HM+C RP + +VP G W C +C ++ R
Sbjct: 1103 CQICKSMD-GDEMLVCDGCESGCHMECFRPRMTKVPEGDWFCQRCREEKSGR 1153
>DICTYBASE|DDB_G0282427 [details] [associations]
symbol:DDB_G0282427 "HMG1/2 (high mobility group)
box-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00184 SMART:SM00249 dictyBase:DDB_G0282427 Pfam:PF00505
EMBL:AAFI02000047 GO:GO:0046872 GO:GO:0008270 eggNOG:COG5648
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 RefSeq:XP_640043.1 ProteinModelPortal:Q54SJ6
EnsemblProtists:DDB0220651 GeneID:8623570 KEGG:ddi:DDB_G0282427
InParanoid:Q54SJ6 OMA:YMNINRE Uniprot:Q54SJ6
Length = 795
Score = 127 (49.8 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 30/78 (38%), Positives = 39/78 (50%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRKII 121
CE C E++L CD CDKG+H CL P + + P G W C C+ + +S+
Sbjct: 618 CELCDDSGHDEKMLFCDVCDKGYHTFCLTPPLSQTPEGGWRCNDCAFC--IHCYSRVDKN 675
Query: 122 DFFKIK-KPNLTEEKCDS 138
KIK K N T CDS
Sbjct: 676 SLNKIKWKENYT--CCDS 691
>UNIPROTKB|F1NMG7 [details] [associations]
symbol:F1NMG7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR008087 InterPro:IPR019787
Pfam:PF00628 Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016
PROSITE:PS51414 SMART:SM00249 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0045944 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959
GeneTree:ENSGT00440000034278 EMBL:AADN02024441 EMBL:AADN02024442
IPI:IPI00575755 Ensembl:ENSGALT00000002020 ArrayExpress:F1NMG7
Uniprot:F1NMG7
Length = 584
Score = 125 (49.1 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 23/53 (43%), Positives = 28/53 (52%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRS 114
C CG G EL+ CD C + FH+ CL P + RVP GTW C C + S
Sbjct: 459 CAVCGDGG---ELICCDGCPRAFHLPCLVPPLPRVPSGTWQCSSCVAKEEEHS 508
>UNIPROTKB|B4DT58 [details] [associations]
symbol:DPF2 "cDNA FLJ54147, highly similar to Zinc-finger
protein ubi-d4" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051 OrthoDB:EOG41JZD4
UniGene:Hs.13495 HGNC:HGNC:9964 ChiTaRS:DPF2 EMBL:AP000944
EMBL:AK300061 IPI:IPI00908945 SMR:B4DT58 STRING:B4DT58
Ensembl:ENST00000415073 UCSC:uc010roe.2 Uniprot:B4DT58
Length = 207
Score = 116 (45.9 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 67 SGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
S R ++LL CD CD+G+HM CL P + P G+W C C
Sbjct: 151 SRARKDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLC 190
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 130 (50.8 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 41 EEILAKAHYAVVERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGT 100
EEIL + E D+ C C G ELL CD C +H+ CL P + +P G
Sbjct: 431 EEILEEVGGDPEEEDDHHMEFCRVCKDGG---ELLCCDTCPSSYHIHCLNPPLPEIPNGE 487
Query: 101 WLCPKCS 107
WLCP+C+
Sbjct: 488 WLCPRCT 494
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 31/91 (34%), Positives = 41/91 (45%)
Query: 16 GSRRRTEAPRRMLXXXXXXXXXXXMEEILAKAHYAVVERGDYGDVGCEQCGSGERAEELL 75
GS R+ R+ L EE+ A Y + DY CE C G E++
Sbjct: 334 GSTSRSSRSRKKLRTTKKKKKGE--EEVTAVDGYET-DHQDY----CEVCQQGG---EII 383
Query: 76 LCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
LCD C + +HM CL P + + P G W CP C
Sbjct: 384 LCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 414
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 130 (50.8 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 41 EEILAKAHYAVVERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGT 100
EEIL + E D+ C C G ELL CD C +H+ CL P + +P G
Sbjct: 431 EEILEEVGGDPEEEDDHHMEFCRVCKDGG---ELLCCDTCPSSYHIHCLNPPLPEIPNGE 487
Query: 101 WLCPKCS 107
WLCP+C+
Sbjct: 488 WLCPRCT 494
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 31/91 (34%), Positives = 41/91 (45%)
Query: 16 GSRRRTEAPRRMLXXXXXXXXXXXMEEILAKAHYAVVERGDYGDVGCEQCGSGERAEELL 75
GS R+ R+ L EE+ A Y + DY CE C G E++
Sbjct: 334 GSTSRSSRSRKKLRTTKKKKKGE--EEVTAVDGYET-DHQDY----CEVCQQGG---EII 383
Query: 76 LCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
LCD C + +HM CL P + + P G W CP C
Sbjct: 384 LCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 414
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 130 (50.8 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 41 EEILAKAHYAVVERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGT 100
EEIL + E D+ C C G ELL CD C +H+ CL P + +P G
Sbjct: 424 EEILEEVGGDPEEEDDHHMEFCRVCKDGG---ELLCCDTCPSSYHIHCLNPPLPEIPNGE 480
Query: 101 WLCPKCS 107
WLCP+C+
Sbjct: 481 WLCPRCT 487
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 31/91 (34%), Positives = 41/91 (45%)
Query: 16 GSRRRTEAPRRMLXXXXXXXXXXXMEEILAKAHYAVVERGDYGDVGCEQCGSGERAEELL 75
GS R+ R+ L EE+ A Y + DY CE C G E++
Sbjct: 327 GSTSRSSRSRKKLRTAKKKKKGE--EEVTAVDGYET-DHQDY----CEVCQQGG---EII 376
Query: 76 LCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
LCD C + +HM CL P + + P G W CP C
Sbjct: 377 LCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 407
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 130 (50.8 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 41 EEILAKAHYAVVERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGT 100
EEIL + E D+ C C G ELL CD C +H+ CL P + +P G
Sbjct: 424 EEILEEVGGDPEEEDDHHMEFCRVCKDGG---ELLCCDTCPSSYHIHCLNPPLPEIPNGE 480
Query: 101 WLCPKCS 107
WLCP+C+
Sbjct: 481 WLCPRCT 487
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 31/91 (34%), Positives = 41/91 (45%)
Query: 16 GSRRRTEAPRRMLXXXXXXXXXXXMEEILAKAHYAVVERGDYGDVGCEQCGSGERAEELL 75
GS R+ R+ L EE+ A Y + DY CE C G E++
Sbjct: 327 GSTSRSSRSRKKLRTAKKKKKGE--EEVTAVDGYET-DHQDY----CEVCQQGG---EII 376
Query: 76 LCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
LCD C + +HM CL P + + P G W CP C
Sbjct: 377 LCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 407
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 130 (50.8 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 41 EEILAKAHYAVVERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGT 100
EEIL + E D+ C C G ELL CD C +H+ CL P + +P G
Sbjct: 451 EEILEEVGGDPEEEDDHHMEFCRVCKDGG---ELLCCDTCPSSYHIHCLNPPLPEIPNGE 507
Query: 101 WLCPKCS 107
WLCP+C+
Sbjct: 508 WLCPRCT 514
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 31/91 (34%), Positives = 41/91 (45%)
Query: 16 GSRRRTEAPRRMLXXXXXXXXXXXMEEILAKAHYAVVERGDYGDVGCEQCGSGERAEELL 75
GS R+ R+ L EE+ A Y + DY CE C G E++
Sbjct: 354 GSTSRSSRSRKKLRTTKKKKKGE--EEVTAVDGYET-DHQDY----CEVCQQGG---EII 403
Query: 76 LCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
LCD C + +HM CL P + + P G W CP C
Sbjct: 404 LCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 434
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 130 (50.8 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 41 EEILAKAHYAVVERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGT 100
EEIL + E D+ C C G ELL CD C +H+ CL P + +P G
Sbjct: 453 EEILEEVGGDPEEEDDHHMEFCRVCKDGG---ELLCCDTCPSSYHIHCLNPPLPEIPNGE 509
Query: 101 WLCPKCS 107
WLCP+C+
Sbjct: 510 WLCPRCT 516
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 31/91 (34%), Positives = 41/91 (45%)
Query: 16 GSRRRTEAPRRMLXXXXXXXXXXXMEEILAKAHYAVVERGDYGDVGCEQCGSGERAEELL 75
GS R+ R+ L EE+ A Y + DY CE C G E++
Sbjct: 356 GSTSRSSRSRKKLRTTKKKKKGE--EEVTAVDGYET-DHQDY----CEVCQQGG---EII 405
Query: 76 LCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
LCD C + +HM CL P + + P G W CP C
Sbjct: 406 LCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 436
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 130 (50.8 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 41 EEILAKAHYAVVERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGT 100
EEIL + E D+ C C G ELL CD C +H+ CL P + +P G
Sbjct: 452 EEILEEVGGDPEEEDDHHMEFCRVCKDGG---ELLCCDTCPSSYHIHCLNPPLPEIPNGE 508
Query: 101 WLCPKCS 107
WLCP+C+
Sbjct: 509 WLCPRCT 515
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 31/91 (34%), Positives = 41/91 (45%)
Query: 16 GSRRRTEAPRRMLXXXXXXXXXXXMEEILAKAHYAVVERGDYGDVGCEQCGSGERAEELL 75
GS R+ R+ L EE+ A Y + DY CE C G E++
Sbjct: 355 GSTSRSSRSRKKLRTAKKKKKGE--EEVTAVDGYET-DHQDY----CEVCQQGG---EII 404
Query: 76 LCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
LCD C + +HM CL P + + P G W CP C
Sbjct: 405 LCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 435
>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
symbol:chd4b "chromodomain helicase DNA binding
protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
Length = 1953
Score = 130 (50.8 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 24/51 (47%), Positives = 30/51 (58%)
Query: 56 DYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
D+ D CE C G E++LCD C + +HM CL P + R P GTW CP C
Sbjct: 373 DHQDY-CEVCQQGG---EIILCDTCPRAYHMVCLDPDMERAPEGTWSCPHC 419
Score = 121 (47.7 bits), Expect = 0.00087, P = 0.00087
Identities = 22/56 (39%), Positives = 29/56 (51%)
Query: 51 VVERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
V E D+ C C G ELL CD C +H+ CL P + +P G W+CP+C
Sbjct: 449 VEEEDDHHMEFCRVCKDGG---ELLCCDTCPSSYHLHCLNPPLPDIPNGEWICPRC 501
>ZFIN|ZDB-GENE-030424-1 [details] [associations]
symbol:kdm5bb "lysine (K)-specific demethylase 5Bb"
species:7955 "Danio rerio" [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030424-1 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CABZ01042196 EMBL:BX664742
Ensembl:ENSDART00000005583 Bgee:G1K2I1 Uniprot:G1K2I1
Length = 1522
Score = 136 (52.9 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 24/48 (50%), Positives = 27/48 (56%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
C CG G + LLLCD CD +H CL P + VP G W CPKC Q
Sbjct: 317 CLVCGKGNDEDRLLLCDGCDDSYHTFCLIPPLTDVPKGDWRCPKCLTQ 364
Score = 38 (18.4 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 216 MQVLSKEDTETLEQCRAM 233
MQ++ KE+ E E+ R M
Sbjct: 660 MQLMIKEERELREKVRKM 677
Score = 38 (18.4 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 10/49 (20%), Positives = 23/49 (46%)
Query: 125 KIKKPNLTEEKCD-SPQDTRKRRRRSASLVLQKKRRRLLPFTPSEDRSQ 172
K K + ++ D + T+ + ++ + ++K+R R + D SQ
Sbjct: 1407 KKAKRRMNRDEVDIRERGTKLKSKKQRMMGVEKRRERKAASVSASDMSQ 1455
>ZFIN|ZDB-GENE-030131-5379 [details] [associations]
symbol:kdm5ba "lysine (K)-specific demethylase
5Ba" species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030131-5379 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CR628365 IPI:IPI00636517
Ensembl:ENSDART00000058729 ArrayExpress:F1R3Y4 Bgee:F1R3Y4
Uniprot:F1R3Y4
Length = 1483
Score = 133 (51.9 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 24/48 (50%), Positives = 27/48 (56%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
C CG G + LLLCD CD +H CL P + VP G W CPKC Q
Sbjct: 280 CLVCGGGGDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQ 327
Score = 41 (19.5 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 233 MCKRGECPPL 242
+CKR E PPL
Sbjct: 1186 LCKRSEKPPL 1195
>ZFIN|ZDB-GENE-021022-3 [details] [associations]
symbol:kat6a "K(lysine) acetyltransferase 6A"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IC] [GO:0000786 "nucleosome"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016747
"transferase activity, transferring acyl groups other than
amino-acyl groups" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI]
[GO:0004402 "histone acetyltransferase activity" evidence=IMP;IDA]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0001502
"cartilage condensation" evidence=IMP] [GO:0016573 "histone
acetylation" evidence=ISS] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=IGI;IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0009880 "embryonic pattern specification" evidence=IMP]
[GO:0051216 "cartilage development" evidence=IGI;IMP] [GO:0048706
"embryonic skeletal system development" evidence=IMP] [GO:0014036
"neural crest cell fate specification" evidence=IMP]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002717
InterPro:IPR005818 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01853 PROSITE:PS50016 PROSITE:PS51504
SMART:SM00184 SMART:SM00249 SMART:SM00384 SMART:SM00526
ZFIN:ZDB-GENE-021022-3 GO:GO:0006355 GO:GO:0009952 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0001502 GO:GO:0009880
GO:GO:0010172 GO:GO:0006334 GO:GO:0000786 GO:GO:0004402
GO:GO:0048703 GO:GO:0014036 HOVERGEN:HBG052563 EMBL:BC163678
IPI:IPI00914465 UniGene:Dr.133871 STRING:B3DK07 Uniprot:B3DK07
Length = 2247
Score = 142 (55.0 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 62 CEQC-GSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRK 119
C C G+ A+ +L CD CD+GFHM+C P ++R+P G W+C C + + R K
Sbjct: 287 CSSCQDQGKNADNMLFCDSCDRGFHMECCDPPLMRMPKGMWICQICRPREKGRKLLHDK 345
Score = 39 (18.8 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 270 IGDVDFIRNREHDDCDSMMTLLLATDP 296
+ D + R+ +DC++ ++ AT P
Sbjct: 1400 MADAEEDEERDDEDCNNRVSRKTATTP 1426
Score = 37 (18.1 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 234 CKRGECPPLVVVYDSCEGF 252
C +G P SCEG+
Sbjct: 389 CSQGSSSPHSSSSSSCEGY 407
>MGI|MGI:99780 [details] [associations]
symbol:Kdm5d "lysine (K)-specific demethylase 5D"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99780 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:AF127244 EMBL:AK140971 EMBL:BC059077 EMBL:Z29652
IPI:IPI00123375 IPI:IPI00848809 IPI:IPI00848997 IPI:IPI00850747
PIR:I48776 RefSeq:NP_035549.1 UniGene:Mm.262676
ProteinModelPortal:Q62240 SMR:Q62240 STRING:Q62240
PhosphoSite:Q62240 PRIDE:Q62240 Ensembl:ENSMUST00000055032
GeneID:20592 KEGG:mmu:20592 UCSC:uc009uyz.1 UCSC:uc009uzb.1
InParanoid:Q62240 NextBio:298905 Bgee:Q62240 Genevestigator:Q62240
GermOnline:ENSMUSG00000056673 Uniprot:Q62240
Length = 1548
Score = 130 (50.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C C G+ ++ LLCD C +H+ CL P + VP G W CPKC
Sbjct: 326 CRICSRGDEVDKFLLCDGCSDNYHIFCLLPPLSEVPKGVWRCPKC 370
Score = 44 (20.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 120 IIDFFKIKKP-NLTEEKCDSPQDTRKRRRRSASLVLQKKRRRLLPFTPSEDRSQRL 174
+++ K + P N +EE+ +P+ R+RR++ +VL +K FT E S+R+
Sbjct: 1433 LLELEKPENPGNWSEEQ--TPERRRQRRQK---VVLSRKGE---DFTQKELESKRV 1480
Score = 44 (20.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 205 SANQAEFEEGGMQVLSKEDTETLEQCRAMCKRGECPPLVVVYDSCEGFTVEADG--QIKD 262
S N+A E + +++ E C ++ L V+ E V +K+
Sbjct: 961 SVNKARAELQELLTIAECWEEKAHFCLKASQKHSPATLEVIIREAENIPVYLPNIQSLKE 1020
Query: 263 -MTFIAEYIGDVDFIRNREHDDC 284
+T +I DV+ I+N +H C
Sbjct: 1021 ALTKAQAWIADVNEIQNGDHYPC 1043
>UNIPROTKB|H0YMU7 [details] [associations]
symbol:MLL3 "Histone-lysine N-methyltransferase MLL3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016571 "histone methylation" evidence=IEA] InterPro:IPR001841
InterPro:IPR000637 InterPro:IPR001594 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00354
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50216 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0016571 EMBL:AC005631
EMBL:AC006017 EMBL:AC104692 HGNC:HGNC:13726 ChiTaRS:MLL3
EMBL:AC006474 ProteinModelPortal:H0YMU7 SMR:H0YMU7
Ensembl:ENST00000558084 Bgee:H0YMU7 Uniprot:H0YMU7
Length = 826
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C+ C ++L+CD CDKG+H CL+P++ VP W C C
Sbjct: 391 CQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNC 435
>FB|FBgn0027620 [details] [associations]
symbol:Acf1 "ATP-dependent chromatin assembly factor large
subunit" species:7227 "Drosophila melanogaster" [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0016590 "ACF
complex" evidence=IDA;IPI] [GO:0006334 "nucleosome assembly"
evidence=IDA] [GO:0006333 "chromatin assembly or disassembly"
evidence=NAS;TAS] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016589 "NURF complex" evidence=IDA] [GO:0008623
"CHRAC" evidence=IDA;NAS] [GO:0042766 "nucleosome mobilization"
evidence=IDA;TAS] [GO:0003677 "DNA binding" evidence=IDA;TAS]
[GO:0031497 "chromatin assembly" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0043462 "regulation of ATPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048666 "neuron development" evidence=IMP] [GO:0008544
"epidermis development" evidence=IMP] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0045892 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0048813 GO:GO:0007517 GO:GO:0043462 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0008544 GO:GO:0042766
GO:GO:0016584 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
GO:GO:0016590 GO:GO:0008623 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 HSSP:Q9UIG0 FlyBase:FBgn0027620 EMBL:AJ238397
ProteinModelPortal:Q9NG24 STRING:Q9NG24 PRIDE:Q9NG24
InParanoid:Q9NG24 ArrayExpress:Q9NG24 Bgee:Q9NG24 Uniprot:Q9NG24
Length = 1476
Score = 132 (51.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 28/88 (31%), Positives = 43/88 (48%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRKII 121
C+ C G E++LLCD+C+ G HM CL+P + VP G W C C + + K
Sbjct: 1065 CKVCRRGSDPEKMLLCDECNAGTHMFCLKPKLRSVPPGNWYCNDCVKSLGLSNGQNEKDK 1124
Query: 122 -DFFKIKKPNLTEEKCDSPQDTRKRRRR 148
K K+ + EE+ D D + ++
Sbjct: 1125 KQATKKKRKFIVEEEDDEATDEEEEEKK 1152
Score = 41 (19.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 293 ATDPSKSLVICPDKRGNIARFINGINN 319
A P SL +C DK AR NG NN
Sbjct: 1311 AKRPRNSLRLCIDKT---ARPSNGNNN 1334
>UNIPROTKB|H7C212 [details] [associations]
symbol:MLL3 "Histone-lysine N-methyltransferase MLL3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 EMBL:AC005631 EMBL:AC006017 EMBL:AC104692
HGNC:HGNC:13726 ChiTaRS:MLL3 EMBL:AC006474
ProteinModelPortal:H7C212 Ensembl:ENST00000418673 Uniprot:H7C212
Length = 228
Score = 116 (45.9 bits), Expect = 0.00012, P = 0.00012
Identities = 21/45 (46%), Positives = 23/45 (51%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
CE CG LLLCD CD +H CL P + VP G W C C
Sbjct: 166 CEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWC 210
>TAIR|locus:2099321 [details] [associations]
symbol:AL3 "AT3G42790" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0035064 "methylated histone residue
binding" evidence=ISS] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR021998 Pfam:PF12165
HOGENOM:HOG000238550 EMBL:AL138639 EMBL:AY062851 EMBL:AY114574
IPI:IPI00524054 PIR:T47337 RefSeq:NP_189865.1 UniGene:At.27212
ProteinModelPortal:Q9M2B4 SMR:Q9M2B4 PaxDb:Q9M2B4 PRIDE:Q9M2B4
EnsemblPlants:AT3G42790.1 GeneID:823316 KEGG:ath:AT3G42790
TAIR:At3g42790 eggNOG:NOG243978 InParanoid:Q9M2B4 OMA:NEEWEVN
PhylomeDB:Q9M2B4 ProtClustDB:CLSN2686751 Genevestigator:Q9M2B4
Uniprot:Q9M2B4
Length = 250
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 53 ERGDYGDVGCEQCGSGERAEEL-LLCDKCDKGFHMKCLRPIVVRVP-IGTWLCPKCSGQR 110
+ D+G+ C CG + A+E + CD C+K FH KC++ R I + CP CS +R
Sbjct: 188 DEDDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCVKITPARAEHIKQYKCPSCSNKR 247
>POMBASE|SPBP19A11.06 [details] [associations]
symbol:lid2 "Lid2 complex subunit, predicted histone
demethylase Lid2" species:4896 "Schizosaccharomyces pombe"
[GO:0000070 "mitotic sister chromatid segregation" evidence=IMP]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0019787 "small conjugating protein ligase
activity" evidence=ISM] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0031507 "heterochromatin
assembly" evidence=IMP] [GO:0031618 "nuclear centromeric
heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
heterochromatin" evidence=IDA] [GO:0034630 "RITS complex
localization" evidence=IMP] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=IDA] [GO:0048189
"Lid2 complex" evidence=IDA] [GO:0051567 "histone H3-K9
methylation" evidence=IMP] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=IMP] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00184 SMART:SM00249 SMART:SM00558 PomBase:SPBP19A11.06
Prosite:PS00518 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0030466
GO:GO:0030702 GO:GO:0000070 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0031934 GO:GO:0051567
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0048189 GO:GO:0019787
GO:GO:0031507 GO:GO:0051572 GO:GO:0031618 PROSITE:PS51183
GO:GO:0034630 eggNOG:NOG327026 GO:GO:0034647 OrthoDB:EOG44N21B
KO:K11446 PIR:T50313 RefSeq:NP_596174.1 ProteinModelPortal:Q9HDV4
IntAct:Q9HDV4 STRING:Q9HDV4 EnsemblFungi:SPBP19A11.06.1
GeneID:2541299 KEGG:spo:SPBP19A11.06 OMA:LPCVIRE NextBio:20802409
Uniprot:Q9HDV4
Length = 1513
Score = 130 (50.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 32/102 (31%), Positives = 48/102 (47%)
Query: 51 VVERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQR 110
++ERG+ CE CG + E +LLCD C+ +H CL P + +P W C C +
Sbjct: 264 LIERGEQ----CEYCGLDKNPETILLCDGCEAAYHTSCLDPPLTSIPKEDWYCDAC--KF 317
Query: 111 RVRSFSQRKIIDFFKIKKPNLTEEKCDSPQDTRKRRRRSASL 152
+ + RK FK K +L E + +T R S+ L
Sbjct: 318 NISDYDPRK---GFKWKLSSLKERSAEI-FNTLGERNSSSKL 355
Score = 42 (19.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 23/87 (26%), Positives = 38/87 (43%)
Query: 160 RLLPFTPSEDRSQRLSQMGSLAHALTALQMEFSDDLTYMP-GMAPRSANQAEF---EEGG 215
+LLPF P E ++ L ++ LA + + E L + P G+ A F + G
Sbjct: 1168 KLLPFQPKE--TETLRKVVDLA---SKFRQEMQA-LAHNPFGLTMAEVPLARFYLRKMEG 1221
Query: 216 MQVLSKEDTETLEQCRAMCKRGECPPL 242
++L ++T Q K EC P+
Sbjct: 1222 AEILLVDETNLFRQ-----KLHECVPI 1243
>DICTYBASE|DDB_G0282711 [details] [associations]
symbol:DDB_G0282711 "PHD zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 dictyBase:DDB_G0282711 EMBL:AAFI02000047
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 eggNOG:NOG79337 RefSeq:XP_640220.1
ProteinModelPortal:Q54S19 EnsemblProtists:DDB0216408 GeneID:8623760
KEGG:ddi:DDB_G0282711 InParanoid:Q54S19 OMA:EREYNDE Uniprot:Q54S19
Length = 1361
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 30/102 (29%), Positives = 46/102 (45%)
Query: 62 CEQCGSGERAEELLLCD--KCDKGFHMKCLRPIVVRVPIGTWLCPKCS-GQRRVRSFSQR 118
C C +G+ +++LLCD C +G+HM CLR + VP G W+C C G S
Sbjct: 323 CSSCNTGKDEDKILLCDTDNCSRGYHMYCLRYPITSVPKGDWICDFCRFGDISADLHSAD 382
Query: 119 KIIDFFKIKKPNLTEEKCDSPQDTRKRRRRSASLVLQKKRRR 160
D I E++ ++ K R R +K++ R
Sbjct: 383 DDEDG-AINSQKEIEKQKQKQKEKEKEREREREREKEKEKER 423
>SGD|S000003880 [details] [associations]
symbol:JHD2 "JmjC domain family histone demethylase specific
for H3-K4" species:4932 "Saccharomyces cerevisiae" [GO:0032453
"histone demethylase activity (H3-K4 specific)" evidence=IDA;IMP]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0016577 "histone demethylation" evidence=IDA;IMP] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 SGD:S000003880
GO:GO:0005634 GO:GO:0005737 EMBL:BK006943 GO:GO:0046872
GO:GO:0008270 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
EMBL:Z49619 EMBL:Z49620 PIR:S57142 RefSeq:NP_012653.1
ProteinModelPortal:P47156 SMR:P47156 DIP:DIP-4835N IntAct:P47156
MINT:MINT-537060 STRING:P47156 PaxDb:P47156 EnsemblFungi:YJR119C
GeneID:853583 KEGG:sce:YJR119C CYGD:YJR119c HOGENOM:HOG000113131
OMA:RNISGMT OrthoDB:EOG44N21B NextBio:974376 Genevestigator:P47156
GermOnline:YJR119C GO:GO:0032453 Uniprot:P47156
Length = 728
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
D C C + +LCD CDK FH+ CL P + RVP G W+C C
Sbjct: 235 DDACIVCRKTNDPKRTILCDSCDKPFHIYCLSPPLERVPSGDWICNTC 282
>ZFIN|ZDB-GENE-121031-4 [details] [associations]
symbol:chd3 "chromodomain helicase DNA binding
protein 3" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-121031-4
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016818 EMBL:BC127572
EMBL:BC127574 IPI:IPI00488488 UniGene:Dr.66871 eggNOG:NOG299768
InParanoid:A0PJQ7 OMA:DSTHEET Uniprot:A0PJQ7
Length = 430
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 56 DYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
D+ D CE C G E++LCD C + +H+ CL P + + P G W CP C
Sbjct: 381 DHQDY-CEVCQQGG---EIILCDTCPRAYHLVCLEPELEKAPEGKWSCPHC 427
>DICTYBASE|DDB_G0277341 [details] [associations]
symbol:DDB_G0277341 "PHD zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 dictyBase:DDB_G0277341 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AAFI02000019 eggNOG:NOG145066
RefSeq:XP_642746.2 ProteinModelPortal:Q86K47 SMR:Q86K47
EnsemblProtists:DDB0219998 GeneID:8620936 KEGG:ddi:DDB_G0277341
InParanoid:Q86K47 OMA:ASMPSEF Uniprot:Q86K47
Length = 914
Score = 124 (48.7 bits), Expect = 0.00017, P = 0.00017
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 53 ERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRR 111
+RG D C CG G +LL CD C FH+ CL P + +P G W C C+ +++
Sbjct: 55 KRGVINDDYCSGCGDGG---DLLCCDNCQASFHLICLNPPLNEIPSGDWFCDSCTYKKQ 110
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 127 (49.8 bits), Expect = 0.00019, P = 0.00019
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 56 DYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
D+ D CE C G E++LCD C + +HM CL P + + P GTW CP C
Sbjct: 351 DHQDY-CEVCQQGG---EIILCDTCPRAYHMVCLDPDMEKAPEGTWSCPHC 397
Score = 122 (48.0 bits), Expect = 0.00067, P = 0.00067
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 53 ERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107
E D+ C C G ELL CD C +H+ CL P + +P G W+CP+C+
Sbjct: 424 EEDDHHMEFCRVCKDGG---ELLCCDSCPSSYHIHCLNPPLPEIPNGEWICPRCT 475
>ZFIN|ZDB-GENE-091118-99 [details] [associations]
symbol:si:ch211-244o18.1 "si:ch211-244o18.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 ZFIN:ZDB-GENE-091118-99 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
GeneTree:ENSGT00690000101661 EMBL:BX294167 IPI:IPI00993170
Ensembl:ENSDART00000133525 Uniprot:F1R5P1
Length = 589
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 21/45 (46%), Positives = 24/45 (53%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
CE CG LLLCD CD +H CL P + VP G+W C C
Sbjct: 19 CEACGQASDPGRLLLCDDCDISYHTYCLDPPLQNVPKGSWKCKWC 63
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 126 (49.4 bits), Expect = 0.00022, P = 0.00022
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 53 ERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109
E D+ + C C G ELL CD C +H+ CL P + +P G WLCP+C+ Q
Sbjct: 340 EEDDHMEF-CRVCKDGG---ELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTPQ 392
>WB|WBGene00016200 [details] [associations]
symbol:dpff-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 EMBL:FO080703 InterPro:IPR025750 Pfam:PF14051
eggNOG:NOG271547 HOGENOM:HOG000217918 GeneTree:ENSGT00530000063194
PIR:F88469 RefSeq:NP_498281.2 ProteinModelPortal:Q09477 SMR:Q09477
IntAct:Q09477 MINT:MINT-1048693 STRING:Q09477 PaxDb:Q09477
PRIDE:Q09477 EnsemblMetazoa:C28H8.9a GeneID:175832
KEGG:cel:CELE_C28H8.9 CTD:175832 WormBase:C28H8.9a
InParanoid:Q09477 OMA:TQIKEEY NextBio:889856 ArrayExpress:Q09477
Uniprot:Q09477
Length = 372
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
C CG+ E ++LL CD CD+G+H+ CL P + + P + C C
Sbjct: 314 CTICGTSENDDKLLFCDDCDRGYHLYCLTPALEKAPDDEYSCRLC 358
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 120 (47.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 56 DYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
D+ D CE C G E++LCD C + +H+ CL P + R P G W CP C
Sbjct: 376 DHQDY-CEVCQQGG---EIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 422
Score = 54 (24.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 208 QAEFEEGGMQVLSKEDTETLEQCRAMCKRG 237
+ E+EEG + +E+ + +E CR +CK G
Sbjct: 435 EEEYEEGEEEGEKEEEDDHMEYCR-VCKDG 463
>RGD|1595855 [details] [associations]
symbol:Uhrf1 "ubiquitin-like with PHD and ring finger domains 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0000790 "nuclear chromatin" evidence=ISO;ISS] [GO:0000791
"euchromatin" evidence=ISO;ISS] [GO:0000792 "heterochromatin"
evidence=ISO;ISS] [GO:0000987 "core promoter proximal region
sequence-specific DNA binding" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0005634
"nucleus" evidence=ISO] [GO:0005657 "replication fork"
evidence=ISO;ISS] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=ISO;ISS] [GO:0008283 "cell proliferation"
evidence=ISO] [GO:0008327 "methyl-CpG binding" evidence=ISO]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO;ISS]
[GO:0010390 "histone monoubiquitination" evidence=IEA;ISO]
[GO:0016363 "nuclear matrix" evidence=IEA;ISO] [GO:0016574 "histone
ubiquitination" evidence=ISO;ISS] [GO:0031493 "nucleosomal histone
binding" evidence=IEA;ISO] [GO:0032270 "positive regulation of
cellular protein metabolic process" evidence=ISO] [GO:0035064
"methylated histone residue binding" evidence=ISO;ISS] [GO:0042393
"histone binding" evidence=ISO;ISS] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISO;ISS] [GO:0051865 "protein autoubiquitination"
evidence=ISO;ISS] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 RGD:1595855
Prosite:PS00299 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0006351 GO:GO:0000122 GO:GO:0007049
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842
GO:GO:0035064 InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907
GO:GO:0042787 GO:GO:0051865 GO:GO:0000792 GO:GO:0005657
GO:GO:0016574 GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722
GO:GO:0000791 KO:K10638 Gene3D:2.30.280.10 CTD:29128
HOVERGEN:HBG059298 GO:GO:0044729 InterPro:IPR021991 Pfam:PF12148
EMBL:AY321334 EMBL:BC099224 IPI:IPI00371346 RefSeq:NP_001008882.1
UniGene:Rn.54318 ProteinModelPortal:Q7TPK1 SMR:Q7TPK1 PRIDE:Q7TPK1
GeneID:316129 KEGG:rno:316129 NextBio:670462 Genevestigator:Q7TPK1
Uniprot:Q7TPK1
Length = 774
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGT-WLCPKC 106
C CG E E+ +LCD+CD FH+ CL+P + VP W CP C
Sbjct: 315 CHICGGREAPEKQVLCDECDMAFHLYCLQPPLTCVPPEPEWYCPSC 360
>UNIPROTKB|D4ADM0 [details] [associations]
symbol:LOC100362634 "Protein LOC100362634" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
IPI:IPI00968435 Ensembl:ENSRNOT00000055502 OMA:SPHPEEL
ArrayExpress:D4ADM0 Uniprot:D4ADM0
Length = 733
Score = 121 (47.7 bits), Expect = 0.00028, P = 0.00028
Identities = 21/45 (46%), Positives = 24/45 (53%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
CE CG LLLCD CD +H CL P ++ VP G W C C
Sbjct: 675 CEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWC 719
>ZFIN|ZDB-GENE-071008-4 [details] [associations]
symbol:aire "autoimmune regulator" species:7955
"Danio rerio" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006959
"humoral immune response" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-071008-4 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0045182 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 GeneTree:ENSGT00440000034278 EMBL:BX649390
IPI:IPI00876716 Ensembl:ENSDART00000079317 Bgee:F1Q623
Uniprot:F1Q623
Length = 513
Score = 119 (46.9 bits), Expect = 0.00028, P = 0.00028
Identities = 21/55 (38%), Positives = 28/55 (50%)
Query: 56 DYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQR 110
++ D C C G EL+ CD C + FH+ CL P + +P GTW C C R
Sbjct: 291 EHNDDECAVCKDGG---ELICCDGCPRAFHLSCLVPPLTSIPRGTWRCQLCQSNR 342
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 123 (48.4 bits), Expect = 0.00030, P = 0.00030
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 53 ERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107
E D+ + C C G ELL CD C +H+ CL P + +P G WLCP+C+
Sbjct: 385 EEDDHMEF-CRVCKDGG---ELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 435
>UNIPROTKB|F1PJN4 [details] [associations]
symbol:UHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042393 "histone binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000626 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628 Pfam:PF02182
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184
SMART:SM00213 SMART:SM00249 SMART:SM00466 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
OMA:HVEPGLQ InterPro:IPR021991 Pfam:PF12148 EMBL:AAEX03012542
EMBL:AAEX03012543 EMBL:AAEX03012544 EMBL:AAEX03012540
EMBL:AAEX03012541 Ensembl:ENSCAFT00000030070 Uniprot:F1PJN4
Length = 792
Score = 121 (47.7 bits), Expect = 0.00031, P = 0.00031
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPI-GTWLCPKC 106
C CG + ++ L+CD+CD FH+ CLRP + +P W CP+C
Sbjct: 321 CHLCGGKQDPDKQLMCDECDMAFHIYCLRPPLSSIPKEDEWYCPEC 366
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 123 (48.4 bits), Expect = 0.00031, P = 0.00031
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 53 ERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107
E D+ + C C G ELL CD C +H+ CL P + +P G WLCP+C+
Sbjct: 411 EEDDHMEF-CRVCKDGG---ELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 461
>UNIPROTKB|I3LTW3 [details] [associations]
symbol:I3LTW3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GeneTree:ENSGT00390000008296
EMBL:AEMK01185240 EMBL:CU928954 Ensembl:ENSSSCT00000025343
Uniprot:I3LTW3
Length = 113
Score = 95 (38.5 bits), Expect = 0.00035, P = 0.00035
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 75 LLCDKCDKGFHMKCLRPIVVRVPIGT-WLCPKC-SGQRRVRSFSQRKIIDFFKIKKPNL- 131
+LCD+C+ +H+ CL P + +VP W CP C + V +R + K K P+
Sbjct: 3 VLCDECNMAYHIYCLNPPLDKVPEEEYWYCPSCKTDSSEVVKAGERLKMSKKKAKMPSAS 62
Query: 132 TEEKCD 137
TE + D
Sbjct: 63 TESRRD 68
>ZFIN|ZDB-GENE-040426-1573 [details] [associations]
symbol:phf10 "PHD finger protein 10" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 ZFIN:ZDB-GENE-040426-1573 GO:GO:0005634 GO:GO:0007399
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 EMBL:BX629343
GeneTree:ENSGT00530000063194 CTD:55274 eggNOG:NOG279558
HOGENOM:HOG000286026 HOVERGEN:HBG053581 OrthoDB:EOG4BCDNG
EMBL:AY398397 EMBL:BC067626 IPI:IPI00635065 RefSeq:NP_956949.3
UniGene:Dr.78790 Ensembl:ENSDART00000102563 GeneID:393628
KEGG:dre:393628 InParanoid:Q6NWE1 NextBio:20814637
ArrayExpress:Q6NWE1 Bgee:Q6NWE1 Uniprot:Q6NWE1
Length = 490
Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107
C C EE++ CDKCD+GFH C+ + +P+G W+C CS
Sbjct: 428 CTVCQQPHHEEEMMFCDKCDRGFHTFCVG--MDSIPMGCWVCDLCS 471
>UNIPROTKB|C9J929 [details] [associations]
symbol:PHF15 "Protein Jade-2" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 PROSITE:PS50016 SMART:SM00249 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR019542 Pfam:PF10513
HOGENOM:HOG000220882 HGNC:HGNC:22984 ChiTaRS:PHF15
OrthoDB:EOG41NTKC EMBL:AC005355 EMBL:AC106763 IPI:IPI00879315
ProteinModelPortal:C9J929 SMR:C9J929 STRING:C9J929
Ensembl:ENST00000431355 ArrayExpress:C9J929 Bgee:C9J929
Uniprot:C9J929
Length = 255
Score = 113 (44.8 bits), Expect = 0.00037, P = 0.00037
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 59 DVGCEQCGS--GERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107
DV C+ C S GE E++ CDKC+ H C +++VP G+WLC C+
Sbjct: 199 DVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACYG--ILKVPTGSWLCRTCA 247
>UNIPROTKB|F6UA42 [details] [associations]
symbol:uhrf1 "E3 ubiquitin-protein ligase UHRF1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0000791 "euchromatin" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005657 "replication fork"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0016574 "histone ubiquitination" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISS] [GO:0051865 "protein autoubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0000122 GO:GO:0007049 GO:GO:0000790 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064 InterPro:IPR019955
PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787 GO:GO:0051865
GO:GO:0000792 GO:GO:0005657 GO:GO:0016574 GO:GO:0010216
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791 KO:K10638
Gene3D:2.30.280.10 CTD:29128 GO:GO:0044729 InterPro:IPR021991
Pfam:PF12148 EMBL:AAMC01100082 EMBL:AAMC01100083 EMBL:AAMC01100084
EMBL:AAMC01100085 EMBL:AAMC01100086 EMBL:AAMC01100087
RefSeq:XP_002940183.1 GeneID:100491405 KEGG:xtr:100491405
Xenbase:XB-GENE-5821474 Bgee:F6UA42 Uniprot:F6UA42
Length = 775
Score = 120 (47.3 bits), Expect = 0.00039, P = 0.00039
Identities = 26/84 (30%), Positives = 38/84 (45%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGT-WLCPKCSGQRRVRSFSQRKI 120
C CG + E+ LLCD+CD FH+ CL+P + +P W CP C + K+
Sbjct: 318 CYVCGGKQDPEKQLLCDECDMAFHIYCLKPPLSAIPQDEDWYCPDCRNDASEVVLAGEKL 377
Query: 121 IDFFKIKKPNLTEEKCDSPQDTRK 144
+ KK + S +D K
Sbjct: 378 KE--SKKKAKMASASSSSQRDWGK 399
>FB|FBgn0263667 [details] [associations]
symbol:Lpt "Lost PHDs of trr" species:7227 "Drosophila
melanogaster" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0006911 "phagocytosis, engulfment" evidence=IMP] [GO:0051568
"histone H3-K4 methylation" evidence=IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0044666 "MLL3/4 complex"
evidence=IDA] [GO:0035076 "ecdysone receptor-mediated signaling
pathway" evidence=IGI] [GO:0071390 "cellular response to ecdysone"
evidence=IMP] [GO:1900114 "positive regulation of histone H3-K9
trimethylation" evidence=IMP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=IDA] [GO:0008230
"ecdysone receptor holocomplex" evidence=IPI] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0007474 "imaginal
disc-derived wing vein specification" evidence=IMP] [GO:0018990
"ecdysis, chitin-based cuticle" evidence=IMP] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00109
SMART:SM00184 SMART:SM00249 EMBL:AE013599 GO:GO:0006911
GO:GO:0035556 GO:GO:0046872 GO:GO:0007474 GO:GO:0008270
GO:GO:0003682 SMART:SM00398 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0042393 GO:GO:0005700
GO:GO:0035076 GO:GO:0051568 GO:GO:0030374 GO:GO:0018990
GO:GO:0044666 HSSP:Q14839 GeneTree:ENSGT00690000101661
GO:GO:1900114 GO:GO:0008230 FlyBase:FBgn0263667 EMBL:BT024446
RefSeq:NP_611847.2 UniGene:Dm.4536 SMR:Q9W1H0 MINT:MINT-284602
EnsemblMetazoa:FBtr0072134 GeneID:37795 KEGG:dme:Dmel_CG5591
UCSC:CG5591-RA InParanoid:Q9W1H0 OMA:LYANTEH GenomeRNAi:37795
NextBio:805447 Uniprot:Q9W1H0
Length = 1482
Score = 123 (48.4 bits), Expect = 0.00039, P = 0.00039
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107
CE CG LLLCD+CD +H+ C+ P + VP G W C C+
Sbjct: 581 CEGCGKKNDEARLLLCDECDISYHIYCVNPPLETVPTGNWKCSFCT 626
>UNIPROTKB|F1S7K1 [details] [associations]
symbol:UHRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IEA]
[GO:0031493 "nucleosomal histone binding" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA] [GO:0010216 "maintenance of DNA
methylation" evidence=IEA] [GO:0005657 "replication fork"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000626 InterPro:IPR001965
InterPro:IPR003105 InterPro:IPR019787 Pfam:PF00240 Pfam:PF00628
Pfam:PF02182 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51015
SMART:SM00184 SMART:SM00213 SMART:SM00249 SMART:SM00466
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR017907 GO:GO:0000792 Gene3D:2.30.30.30
InterPro:IPR014722 Gene3D:2.30.280.10 GeneTree:ENSGT00390000008296
OMA:HVEPGLQ InterPro:IPR021991 Pfam:PF12148 EMBL:CU681848
Ensembl:ENSSSCT00000014764 Uniprot:F1S7K1
Length = 813
Score = 120 (47.3 bits), Expect = 0.00041, P = 0.00041
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPI-GTWLCPKC 106
C CG + ++ L+CD+CD FHM CL P + VP W CP+C
Sbjct: 334 CRLCGGKQDPDKQLMCDECDMAFHMYCLCPPLSSVPSEAEWYCPEC 379
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 120 (47.3 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 56 DYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
D+ D CE C G E++LCD C + +H+ CL P + R P G W CP C
Sbjct: 334 DHQDY-CEVCQQGG---EIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 380
Score = 51 (23.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 208 QAEFEEGGMQVLSKEDTETLEQCRAMCKRG 237
+ ++EE G + +E+ + +E CR +CK G
Sbjct: 393 EEDYEEEGEEGEKEEEDDHMEYCR-VCKDG 421
>UNIPROTKB|F1SSZ2 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
Length = 1667
Score = 123 (48.4 bits), Expect = 0.00044, P = 0.00044
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 53 ERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107
E D+ + C C G ELL CD C +H+ CL P + +P G WLCP+C+
Sbjct: 327 EEDDHMEF-CRVCKDGG---ELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 377
>UNIPROTKB|F1RIM3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
Length = 1723
Score = 123 (48.4 bits), Expect = 0.00046, P = 0.00046
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 53 ERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107
E D+ + C C G ELL CD C +H+ CL P + +P G WLCP+C+
Sbjct: 343 EEDDHMEF-CRVCKDGG---ELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 393
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 120 (47.3 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 56 DYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
D+ D CE C G E++LCD C + +H+ CL P + R P G W CP C
Sbjct: 429 DHQDY-CEVCQQGG---EIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 475
Score = 51 (23.0 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 208 QAEFEEGGMQVLSKEDTETLEQCRAMCKRG 237
+ ++EE G + +E+ + +E CR +CK G
Sbjct: 488 EEDYEEEGEEGEKEEEDDHMEYCR-VCKDG 516
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 120 (47.3 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 56 DYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
D+ D CE C G E++LCD C + +H+ CL P + R P G W CP C
Sbjct: 429 DHQDY-CEVCQQGG---EIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 475
Score = 51 (23.0 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 208 QAEFEEGGMQVLSKEDTETLEQCRAMCKRG 237
+ ++EE G + +E+ + +E CR +CK G
Sbjct: 488 EEDYEEEGEEGEKEEEDDHMEYCR-VCKDG 516
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 123 (48.4 bits), Expect = 0.00048, P = 0.00048
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 53 ERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107
E D+ + C C G ELL CD C +H+ CL P + +P G WLCP+C+
Sbjct: 274 EEDDHMEF-CRVCKDGG---ELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 324
>WB|WBGene00018013 [details] [associations]
symbol:phf-10 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GeneTree:ENSGT00530000063194
OMA:CETSSQD EMBL:FO081281 GeneID:3565141 KEGG:cel:CELE_F33E11.6
UCSC:F33E11.6b CTD:3565141 NextBio:955339 RefSeq:NP_001041113.1
ProteinModelPortal:Q2A950 SMR:Q2A950 STRING:Q2A950
EnsemblMetazoa:F33E11.6b WormBase:F33E11.6b InParanoid:Q2A950
ArrayExpress:Q2A950 Uniprot:Q2A950
Length = 447
Score = 116 (45.9 bits), Expect = 0.00050, P = 0.00050
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLC 103
C C E+ +E++ CD+CD+GFH C+ + ++P GTW+C
Sbjct: 383 CSICNKPEKEDEIVFCDRCDRGFHTYCVG--LKKLPQGTWIC 422
>UNIPROTKB|A7E320 [details] [associations]
symbol:UHRF1 "E3 ubiquitin-protein ligase UHRF1"
species:9913 "Bos taurus" [GO:0044729 "hemi-methylated DNA-binding"
evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0005657 "replication fork" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0000791 "euchromatin"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0035064 "methylated histone residue binding" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0051865
"protein autoubiquitination" evidence=ISS] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0016574 "histone ubiquitination"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0031493 "nucleosomal
histone binding" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0010390 "histone monoubiquitination"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR001841 InterPro:IPR000626
InterPro:IPR001965 InterPro:IPR003105 InterPro:IPR019787
Pfam:PF00240 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00213
SMART:SM00249 SMART:SM00466 UniPathway:UPA00143 Prosite:PS00299
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0006351 GO:GO:0000122 GO:GO:0007049 GO:GO:0000790
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 GO:GO:0004842 GO:GO:0035064
InterPro:IPR019955 PROSITE:PS50053 InterPro:IPR017907 GO:GO:0042787
GO:GO:0051865 GO:GO:0000792 GO:GO:0005657 GO:GO:0016574
GO:GO:0010216 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0000791
eggNOG:COG3440 KO:K10638 Gene3D:2.30.280.10 EMBL:DAAA02019593
EMBL:DAAA02019594 EMBL:BC151671 IPI:IPI00904793
RefSeq:NP_001096568.1 UniGene:Bt.64682 ProteinModelPortal:A7E320
SMR:A7E320 STRING:A7E320 Ensembl:ENSBTAT00000044908 GeneID:530411
KEGG:bta:530411 CTD:29128 GeneTree:ENSGT00390000008296
HOGENOM:HOG000124662 HOVERGEN:HBG059298 OMA:HVEPGLQ
NextBio:20875252 ArrayExpress:A7E320 GO:GO:0044729
InterPro:IPR021991 Pfam:PF12148 Uniprot:A7E320
Length = 786
Score = 119 (46.9 bits), Expect = 0.00050, P = 0.00050
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGT-WLCPKC 106
C CG + ++ L+CD+CD FH+ CLRP + VP W CP C
Sbjct: 322 CHVCGGKQDPDKQLMCDECDMAFHIYCLRPPLSSVPPEEEWYCPDC 367
>UNIPROTKB|E1BS98 [details] [associations]
symbol:PHF15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000123
"histone acetyltransferase complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] [GO:0043981 "histone H4-K5
acetylation" evidence=IEA] [GO:0043982 "histone H4-K8 acetylation"
evidence=IEA] [GO:0043983 "histone H4-K12 acetylation"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0043966 InterPro:IPR019542
Pfam:PF10513 GO:GO:0043983 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GeneTree:ENSGT00690000101689 EMBL:AADN02028342
EMBL:AADN02028343 EMBL:AADN02028344 EMBL:AADN02028345
EMBL:AADN02028346 EMBL:AADN02028347 EMBL:AADN02028348
EMBL:AADN02028349 EMBL:AADN02028350 IPI:IPI00583080
Ensembl:ENSGALT00000010368 Uniprot:E1BS98
Length = 656
Score = 118 (46.6 bits), Expect = 0.00052, P = 0.00052
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 59 DVGCEQCGS--GERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107
DV C+ C S GE E++ CDKC+ H C +++VPIG+WLC C+
Sbjct: 199 DVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACYG--ILKVPIGSWLCRTCA 247
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 123 (48.4 bits), Expect = 0.00052, P = 0.00052
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 53 ERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107
E D+ + C C G ELL CD C +H+ CL P + +P G WLCP+C+
Sbjct: 409 EEDDHMEF-CRVCKDGG---ELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 459
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 123 (48.4 bits), Expect = 0.00053, P = 0.00053
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 53 ERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107
E D+ + C C G ELL CD C +H+ CL P + +P G WLCP+C+
Sbjct: 411 EEDDHMEF-CRVCKDGG---ELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 461
>UNIPROTKB|E1BIC4 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR008087 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PRINTS:PR01711
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 GO:GO:0003682 GO:GO:0045182 GO:GO:0044212
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 OMA:NDDECAV
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
GeneTree:ENSGT00440000034278 EMBL:DAAA02003438 EMBL:DAAA02003439
IPI:IPI00693894 Ensembl:ENSBTAT00000031852 Uniprot:E1BIC4
Length = 561
Score = 117 (46.2 bits), Expect = 0.00054, P = 0.00054
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 63 EQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
++C + ELL CD C + FH+ CL P + +P GTW C C
Sbjct: 305 DECAACRDGGELLCCDGCPRAFHLACLTPPLSEIPSGTWRCSNC 348
>UNIPROTKB|C9JFR1 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 IPI:IPI00031188
HGNC:HGNC:360 ProteinModelPortal:C9JFR1 SMR:C9JFR1 STRING:C9JFR1
Ensembl:ENST00000329347 HOGENOM:HOG000207903 ArrayExpress:C9JFR1
Bgee:C9JFR1 Uniprot:C9JFR1
Length = 244
Score = 111 (44.1 bits), Expect = 0.00057, P = 0.00057
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 63 EQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
++C EL+ CD C + FH+ CL P + +P GTW C C
Sbjct: 90 DECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 133
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 120 (47.3 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 56 DYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
D+ D CE C G E++LCD C + +H+ CL P + R P G W CP C
Sbjct: 377 DHQDY-CEVCQQGG---EIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 423
Score = 50 (22.7 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 208 QAEFEEGGMQVLSKEDTET-LEQCRAMCKRG 237
+ E+EE G + KE+ + +E CR +CK G
Sbjct: 436 EEEYEEEGEEEGEKEEEDDHMEYCR-VCKDG 465
>UNIPROTKB|H9KZW6 [details] [associations]
symbol:H9KZW6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA] [GO:0035097
"histone methyltransferase complex" evidence=IEA] [GO:0043627
"response to estrogen stimulus" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GeneTree:ENSGT00690000101661
EMBL:AADN02067269 EMBL:AADN02067270 Ensembl:ENSGALT00000020812
OMA:ELLPCEL Uniprot:H9KZW6
Length = 725
Score = 118 (46.6 bits), Expect = 0.00059, P = 0.00059
Identities = 21/45 (46%), Positives = 23/45 (51%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
CE CG LLLCD CD +H CL P + VP G W C C
Sbjct: 667 CEVCGKASDPSRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWC 711
>UNIPROTKB|F1P4F7 [details] [associations]
symbol:UHRF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005657 "replication fork" evidence=IEA] [GO:0010216
"maintenance of DNA methylation" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0031493 "nucleosomal histone binding"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR003105
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02182 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51015 SMART:SM00184 SMART:SM00249
SMART:SM00466 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 GO:GO:0000792
Gene3D:2.30.30.30 InterPro:IPR014722 Gene3D:2.30.280.10
GeneTree:ENSGT00390000008296 OMA:HVEPGLQ InterPro:IPR021991
Pfam:PF12148 EMBL:AADN02062015 IPI:IPI00586414
Ensembl:ENSGALT00000006575 Uniprot:F1P4F7
Length = 733
Score = 118 (46.6 bits), Expect = 0.00060, P = 0.00060
Identities = 25/103 (24%), Positives = 50/103 (48%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGT-WLCPKCSGQRRVRSFSQRKI 120
C CG + ++ L+CD+CD FH+ CL P + +P W CP+C R+ + +
Sbjct: 274 CHICGGKQDPDKQLMCDECDMAFHIYCLNPPLSSIPDDEDWYCPEC------RNDASEVV 327
Query: 121 IDFFKIKKPNLTEEKCDSPQDTRKRRRRSASLVLQKKRRRLLP 163
+ K+K+ ++ + +R+ + + V + K ++P
Sbjct: 328 LAGEKLKESKKKQKMASANSSSRRDWGKGMACVGRTKECTIVP 370
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 120 (47.3 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 56 DYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106
D+ D CE C G E++LCD C + +H+ CL P + R P G W CP C
Sbjct: 436 DHQDY-CEVCQQGG---EIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 482
Score = 50 (22.7 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 208 QAEFEEGGMQVLSKEDTET-LEQCRAMCKRG 237
+ E+EE G + KE+ + +E CR +CK G
Sbjct: 495 EEEYEEEGEEEGEKEEEDDHMEYCR-VCKDG 524
>UNIPROTKB|F1NH79 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02061139 EMBL:AADN02061140 EMBL:AADN02061141
EMBL:AADN02061142 EMBL:AADN02061143 IPI:IPI00598956
Ensembl:ENSGALT00000023339 OMA:DGEHEHQ Uniprot:F1NH79
Length = 1895
Score = 129 (50.5 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 26/67 (38%), Positives = 33/67 (49%)
Query: 41 EEILAKAHYAVVERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGT 100
EEIL E D+ C C G ELL CD C +H+ CL P + +P G
Sbjct: 401 EEILEDVVGDAEEEDDHHMEFCRVCKDGG---ELLCCDACPSSYHIHCLNPPLPEIPNGE 457
Query: 101 WLCPKCS 107
WLCP+C+
Sbjct: 458 WLCPRCT 464
Score = 39 (18.8 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 16/81 (19%), Positives = 27/81 (33%)
Query: 108 GQRRVRSFSQRKIIDFFKIKKPNLTEEKCDSPQDTRKRRRRSASLVLQKKRRRLLPFTPS 167
G + S S++++ D K L +++ D ++ S K RLL
Sbjct: 1173 GGSKTGSMSKQELDDILKFGTEELFKDEATEGGDNKEGEDSSVIHYDDKAIERLLDRNQD 1232
Query: 168 EDRSQRLSQMGSLAHALTALQ 188
E L M + Q
Sbjct: 1233 ETEDTELQGMNEYLSSFKVAQ 1253
>ZFIN|ZDB-GENE-050913-31 [details] [associations]
symbol:dpf1 "D4, zinc and double PHD fingers family
1" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR007087
InterPro:IPR013087 InterPro:IPR015880 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016 PROSITE:PS50157
SMART:SM00249 SMART:SM00355 ZFIN:ZDB-GENE-050913-31 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 Gene3D:3.30.160.60
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR025750 Pfam:PF14051
GeneTree:ENSGT00530000063194 EMBL:BX957341 IPI:IPI00851900
Ensembl:ENSDART00000099148 Bgee:F1QG74 Uniprot:F1QG74
Length = 397
Score = 114 (45.2 bits), Expect = 0.00069, P = 0.00069
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 62 CEQCGSGER---------AEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRV 112
C CG+ E ++LL CD CD+G+HM CL P + P G+W C C Q +
Sbjct: 329 CSLCGTSENDKIQLALFLQDQLLFCDDCDRGYHMYCLSPPMSEPPEGSWSCHLCLRQLKE 388
Query: 113 RS 114
++
Sbjct: 389 KA 390
>UNIPROTKB|F1N7W5 [details] [associations]
symbol:LOC788840 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 OMA:SDKQALG
GeneTree:ENSGT00530000063984 EMBL:DAAA02014921 IPI:IPI00842008
Ensembl:ENSBTAT00000042589 Uniprot:F1N7W5
Length = 501
Score = 115 (45.5 bits), Expect = 0.00077, P = 0.00077
Identities = 31/113 (27%), Positives = 53/113 (46%)
Query: 63 EQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRVRSFSQRKIID 122
E C + +R L C C + +H+ CL P + P G W+CPKC Q+ ++
Sbjct: 323 ELCAACKRGTNLQPCGTCPRAYHLSCLDPPLKTAPKGVWVCPKCQ-QKALKKDGGVPWTG 381
Query: 123 FFKIKKPNLTEEKCDSPQDTRKRRRRSASLVLQKKRRRLLPFTPSEDRSQRLS 175
I +T K ++ +K +R + L Q +R++L E+R +RL+
Sbjct: 382 MLAIVHSYVTH-KTVKEEEKQKLLQRGSEL--QSERQQL------EERDRRLA 425
>ASPGD|ASPL0000065135 [details] [associations]
symbol:AN7294 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 GO:GO:0046872
GO:GO:0008270 EMBL:BN001304 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:RANSCPI EnsemblFungi:CADANIAT00000144
Uniprot:C8VCR2
Length = 614
Score = 116 (45.9 bits), Expect = 0.00079, P = 0.00079
Identities = 22/51 (43%), Positives = 27/51 (52%)
Query: 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRV 112
C CG E E LLLCD CD H+ C+ + VP G W C +C QR +
Sbjct: 132 CPICGDSENEEVLLLCDGCDVPTHIYCVG--LDEVPAGPWYCSRCETQRPI 180
>UNIPROTKB|K7EJ43 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
Ensembl:ENST00000584685 Uniprot:K7EJ43
Length = 215
Score = 108 (43.1 bits), Expect = 0.00089, P = 0.00089
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 63 EQCGSGERAEELLLCDKCDKGFHMKCLRPIVVR--VPIGTWLCPKCSGQRRVRSFSQRK 119
+ C S + +LL CD C FH++C P + +P G W+C +C+ +R+ R Q+K
Sbjct: 81 DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRRKKRE--QKK 137
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 322 311 0.00080 116 3 11 22 0.37 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 232
No. of states in DFA: 608 (65 KB)
Total size of DFA: 213 KB (2117 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.59u 0.12s 25.71t Elapsed: 00:00:01
Total cpu time: 25.61u 0.12s 25.73t Elapsed: 00:00:01
Start: Fri May 10 06:17:25 2013 End: Fri May 10 06:17:26 2013
WARNINGS ISSUED: 1