Query 020737
Match_columns 322
No_of_seqs 349 out of 1473
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 07:27:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020737.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020737hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ooi_A Histone-lysine N-methyl 99.8 5.6E-20 1.9E-24 166.9 6.4 147 157-315 13-170 (232)
2 1mvh_A Cryptic LOCI regulator 99.7 5E-19 1.7E-23 166.3 4.8 86 231-316 128-219 (299)
3 3ope_A Probable histone-lysine 99.7 7.5E-19 2.6E-23 158.5 4.1 107 200-315 37-151 (222)
4 3hna_A Histone-lysine N-methyl 99.7 8.5E-19 2.9E-23 163.8 4.2 84 231-315 138-221 (287)
5 1ml9_A Histone H3 methyltransf 99.7 9.8E-19 3.3E-23 164.6 3.8 85 231-315 124-225 (302)
6 3f9x_A Histone-lysine N-methyl 99.7 5.4E-18 1.9E-22 145.7 7.8 90 224-315 14-112 (166)
7 3bo5_A Histone-lysine N-methyl 99.7 1E-18 3.4E-23 163.6 3.3 86 231-316 117-211 (290)
8 3h6l_A Histone-lysine N-methyl 99.7 7.1E-18 2.4E-22 156.8 5.6 102 204-315 86-195 (278)
9 2r3a_A Histone-lysine N-methyl 99.7 5.9E-18 2E-22 159.0 2.8 83 231-315 131-220 (300)
10 2w5y_A Histone-lysine N-methyl 99.6 2.4E-16 8.2E-21 139.1 3.7 79 232-315 44-129 (192)
11 1mm2_A MI2-beta; PHD, zinc fin 99.5 4.1E-15 1.4E-19 107.3 4.4 52 55-109 5-56 (61)
12 1f62_A Transcription factor WS 99.5 2.6E-15 8.8E-20 104.5 3.1 48 61-108 2-49 (51)
13 1xwh_A Autoimmune regulator; P 99.5 3.3E-15 1.1E-19 109.6 3.1 52 57-111 6-57 (66)
14 2yql_A PHD finger protein 21A; 99.5 4.4E-15 1.5E-19 105.4 3.0 50 56-108 6-55 (56)
15 2lri_C Autoimmune regulator; Z 99.5 8.7E-15 3E-19 107.2 3.8 50 58-110 11-60 (66)
16 2l5u_A Chromodomain-helicase-D 99.5 7.1E-15 2.4E-19 106.1 3.1 51 56-109 8-58 (61)
17 1fp0_A KAP-1 corepressor; PHD 99.5 1.6E-14 5.4E-19 111.2 5.0 52 56-110 22-73 (88)
18 2e6r_A Jumonji/ARID domain-con 99.5 7.8E-15 2.7E-19 114.5 2.1 53 57-109 14-66 (92)
19 2puy_A PHD finger protein 21A; 99.5 1.1E-14 3.9E-19 104.6 2.6 50 57-109 3-52 (60)
20 2qpw_A PR domain zinc finger p 99.4 3.9E-14 1.3E-18 120.1 3.4 83 230-316 19-105 (149)
21 3asl_A E3 ubiquitin-protein li 99.4 4.6E-14 1.6E-18 104.6 3.2 48 61-108 20-68 (70)
22 2e6s_A E3 ubiquitin-protein li 99.4 7.4E-14 2.5E-18 105.3 3.9 49 60-108 27-76 (77)
23 2yt5_A Metal-response element- 99.4 4.6E-14 1.6E-18 103.3 1.6 55 57-111 4-63 (66)
24 2k16_A Transcription initiatio 99.4 1E-13 3.5E-18 104.0 2.9 57 53-109 12-68 (75)
25 1wev_A Riken cDNA 1110020M19; 99.4 7.3E-14 2.5E-18 108.1 1.8 52 58-109 15-72 (88)
26 3u5n_A E3 ubiquitin-protein li 99.4 1.7E-13 5.8E-18 122.1 3.7 55 54-111 2-56 (207)
27 2ku3_A Bromodomain-containing 99.4 1E-13 3.4E-18 103.0 1.5 52 56-109 13-66 (71)
28 3shb_A E3 ubiquitin-protein li 99.4 1.9E-13 6.6E-18 102.9 3.0 49 60-108 27-76 (77)
29 2l43_A N-teminal domain from h 99.4 9.2E-14 3.2E-18 107.5 1.0 54 57-112 23-78 (88)
30 3o36_A Transcription intermedi 99.3 7E-13 2.4E-17 115.9 4.4 51 58-111 3-53 (184)
31 1weu_A Inhibitor of growth fam 99.3 1.6E-12 5.3E-17 100.9 4.6 51 57-111 34-87 (91)
32 1wen_A Inhibitor of growth fam 99.3 2.4E-12 8.3E-17 95.5 4.9 50 57-110 14-66 (71)
33 3ask_A E3 ubiquitin-protein li 99.3 1.5E-12 5.2E-17 116.6 3.4 50 59-108 174-224 (226)
34 2f69_A Histone-lysine N-methyl 99.3 3.9E-12 1.3E-16 117.2 5.7 70 240-315 109-191 (261)
35 2kwj_A Zinc finger protein DPF 99.3 1.5E-12 5.1E-17 105.5 2.5 50 60-109 59-108 (114)
36 2lv9_A Histone-lysine N-methyl 99.2 4.4E-12 1.5E-16 100.0 4.5 51 57-109 26-76 (98)
37 2vnf_A ING 4, P29ING4, inhibit 99.2 2.1E-12 7.2E-17 92.7 1.7 49 57-109 8-59 (60)
38 3c6w_A P28ING5, inhibitor of g 99.2 2.3E-12 8E-17 92.2 1.8 49 57-109 7-58 (59)
39 3v43_A Histone acetyltransfera 99.2 6.1E-12 2.1E-16 101.5 4.2 49 60-108 62-111 (112)
40 2ro1_A Transcription intermedi 99.2 5.8E-12 2E-16 110.7 4.1 49 59-110 2-50 (189)
41 1n3j_A A612L, histone H3 lysin 99.2 2.6E-12 8.8E-17 104.5 1.6 68 239-316 3-70 (119)
42 2g6q_A Inhibitor of growth pro 99.2 3.6E-12 1.2E-16 92.1 1.9 49 57-109 9-60 (62)
43 1h3i_A Histone H3 lysine 4 spe 99.2 1.3E-11 4.4E-16 115.3 5.5 71 239-315 162-245 (293)
44 2jmi_A Protein YNG1, ING1 homo 99.2 9.8E-12 3.4E-16 96.2 2.6 50 55-108 22-75 (90)
45 4gne_A Histone-lysine N-methyl 99.1 1.3E-11 4.5E-16 98.5 3.2 49 56-109 12-62 (107)
46 2ysm_A Myeloid/lymphoid or mix 99.1 1.3E-11 4.4E-16 99.3 2.7 51 60-110 55-105 (111)
47 3o70_A PHD finger protein 13; 99.0 1.3E-10 4.6E-15 85.4 3.1 52 56-109 16-67 (68)
48 3ep0_A PR domain zinc finger p 99.0 5E-10 1.7E-14 96.6 6.1 80 239-318 26-109 (170)
49 1x4i_A Inhibitor of growth pro 99.0 1.1E-10 3.9E-15 86.2 1.5 48 57-108 4-54 (70)
50 1wee_A PHD finger family prote 99.0 1.7E-10 5.7E-15 85.7 2.0 56 55-111 12-68 (72)
51 1we9_A PHD finger family prote 98.9 3.1E-10 1.1E-14 82.2 2.0 55 56-110 3-59 (64)
52 2lbm_A Transcriptional regulat 98.9 2.8E-10 9.5E-15 95.1 0.5 52 55-109 59-117 (142)
53 3o7a_A PHD finger protein 13 v 98.9 6.1E-10 2.1E-14 77.5 2.1 49 58-108 3-51 (52)
54 1wew_A DNA-binding family prot 98.9 6.8E-10 2.3E-14 83.7 2.2 52 57-111 14-74 (78)
55 1wem_A Death associated transc 98.8 2.5E-10 8.4E-15 85.7 -0.6 56 56-112 13-73 (76)
56 2ysm_A Myeloid/lymphoid or mix 98.8 2E-09 6.8E-14 86.4 4.5 52 56-107 4-55 (111)
57 3s8p_A Histone-lysine N-methyl 98.8 1.6E-09 5.3E-14 100.0 4.1 72 239-315 130-210 (273)
58 2rsd_A E3 SUMO-protein ligase 98.8 1.8E-09 6.2E-14 79.3 2.5 51 58-109 9-65 (68)
59 2vpb_A Hpygo1, pygopus homolog 98.8 5.8E-10 2E-14 81.2 -0.2 50 57-108 6-65 (65)
60 1wep_A PHF8; structural genomi 98.7 1.6E-09 5.5E-14 81.8 0.6 54 57-111 10-65 (79)
61 3dal_A PR domain zinc finger p 98.7 7.3E-09 2.5E-13 91.2 4.7 81 238-319 56-140 (196)
62 3kqi_A GRC5, PHD finger protei 98.7 2E-09 6.9E-14 80.5 0.5 54 56-110 7-62 (75)
63 2xb1_A Pygopus homolog 2, B-ce 98.7 2.5E-09 8.5E-14 85.2 1.0 50 59-110 3-62 (105)
64 3db5_A PR domain zinc finger p 98.6 2.4E-08 8.1E-13 84.5 5.0 80 238-318 21-105 (151)
65 3ql9_A Transcriptional regulat 98.6 2.4E-09 8.3E-14 88.0 -1.9 53 54-109 52-111 (129)
66 2ri7_A Nucleosome-remodeling f 98.6 3.6E-09 1.2E-13 91.3 -1.0 52 57-109 6-59 (174)
67 2kgg_A Histone demethylase jar 98.6 5.5E-09 1.9E-13 72.6 -0.2 47 61-107 4-52 (52)
68 3rq4_A Histone-lysine N-methyl 98.6 1.7E-08 6E-13 91.9 2.2 74 237-315 100-181 (247)
69 2kwj_A Zinc finger protein DPF 98.3 9.6E-08 3.3E-12 77.0 -0.0 48 60-107 2-59 (114)
70 3kv5_D JMJC domain-containing 98.3 6.9E-08 2.4E-12 96.0 -1.4 53 56-111 34-90 (488)
71 3lqh_A Histone-lysine N-methyl 98.2 2.3E-07 7.9E-12 80.8 1.5 52 60-111 3-65 (183)
72 3v43_A Histone acetyltransfera 98.1 2.8E-07 9.6E-12 74.0 -0.8 49 59-107 5-62 (112)
73 3kv4_A PHD finger protein 8; e 98.0 2.6E-07 9E-12 90.7 -2.8 54 59-113 5-60 (447)
74 3ray_A PR domain-containing pr 98.0 7.8E-06 2.7E-10 73.6 5.8 76 239-319 71-149 (237)
75 3pur_A Lysine-specific demethy 97.9 2.8E-06 9.7E-11 84.3 1.1 43 70-112 54-97 (528)
76 3ihx_A PR domain zinc finger p 97.6 2.4E-05 8.2E-10 66.1 3.4 70 248-319 28-105 (152)
77 1wil_A KIAA1045 protein; ring 97.6 1.3E-05 4.4E-10 60.2 1.3 50 58-108 14-75 (89)
78 4bbq_A Lysine-specific demethy 97.1 0.00017 5.7E-09 57.8 1.8 40 71-110 72-115 (117)
79 2ku7_A MLL1 PHD3-CYP33 RRM chi 96.9 0.00026 9E-09 57.3 1.2 37 73-109 1-44 (140)
80 3rsn_A SET1/ASH2 histone methy 95.9 0.0057 2E-07 52.5 3.9 51 59-110 5-60 (177)
81 3a1b_A DNA (cytosine-5)-methyl 95.5 0.0027 9.4E-08 53.5 0.6 49 59-110 79-135 (159)
82 4gne_A Histone-lysine N-methyl 93.6 0.025 8.5E-07 44.6 1.7 38 62-103 61-98 (107)
83 2pv0_B DNA (cytosine-5)-methyl 93.6 0.014 4.9E-07 55.9 0.4 64 58-125 92-169 (386)
84 1vyx_A ORF K3, K3RING; zinc-bi 91.6 0.02 6.8E-07 40.3 -1.2 51 57-109 4-56 (60)
85 1iym_A EL5; ring-H2 finger, ub 90.3 0.12 4.3E-06 34.5 2.0 46 59-108 5-51 (55)
86 2kiz_A E3 ubiquitin-protein li 90.2 0.04 1.4E-06 38.9 -0.7 49 57-109 12-60 (69)
87 2d8s_A Cellular modulator of i 90.1 0.05 1.7E-06 40.4 -0.3 50 58-109 14-67 (80)
88 2l0b_A E3 ubiquitin-protein li 88.8 0.12 4.3E-06 38.8 1.1 49 57-109 38-86 (91)
89 1x4j_A Ring finger protein 38; 87.8 0.059 2E-06 38.8 -1.3 48 58-109 22-69 (75)
90 2ect_A Ring finger protein 126 87.4 0.27 9.2E-06 35.4 2.1 48 58-109 14-61 (78)
91 1weq_A PHD finger protein 7; s 87.1 0.55 1.9E-05 35.3 3.7 45 60-108 27-78 (85)
92 3k1l_B Fancl; UBC, ring, RWD, 86.2 0.26 9E-06 46.6 1.8 52 57-108 306-369 (381)
93 2ecl_A Ring-box protein 2; RNF 86.0 0.22 7.4E-06 36.6 1.0 48 58-109 14-73 (81)
94 2ecm_A Ring finger and CHY zin 84.4 0.18 6E-06 33.7 -0.2 47 58-108 4-51 (55)
95 1v87_A Deltex protein 2; ring- 82.7 0.43 1.5E-05 37.0 1.4 51 59-109 25-91 (114)
96 2ct0_A Non-SMC element 1 homol 81.7 0.48 1.6E-05 34.6 1.2 47 59-109 15-61 (74)
97 2ep4_A Ring finger protein 24; 80.8 0.21 7.1E-06 35.6 -1.0 47 59-109 15-61 (74)
98 4bbq_A Lysine-specific demethy 76.8 0.45 1.5E-05 37.4 -0.3 36 60-109 8-43 (117)
99 1bor_A Transcription factor PM 76.2 2.8 9.6E-05 28.1 3.8 44 56-109 3-46 (56)
100 3dpl_R Ring-box protein 1; ubi 74.9 0.7 2.4E-05 36.0 0.4 48 58-109 36-98 (106)
101 4a0k_B E3 ubiquitin-protein li 74.8 0.66 2.3E-05 36.9 0.2 49 57-109 46-109 (117)
102 2ecj_A Tripartite motif-contai 71.2 1.9 6.4E-05 28.7 1.8 45 58-106 14-58 (58)
103 2egp_A Tripartite motif-contai 70.5 5 0.00017 28.3 4.2 49 59-110 12-63 (79)
104 3n71_A Histone lysine methyltr 70.3 4 0.00014 40.0 4.7 32 237-268 4-35 (490)
105 2ecy_A TNF receptor-associated 70.2 1.5 5.2E-05 30.2 1.2 45 59-109 15-59 (66)
106 2kn9_A Rubredoxin; metalloprot 70.1 3 0.0001 30.9 2.9 21 89-110 50-70 (81)
107 2k1p_A Zinc finger RAN-binding 69.2 1.8 6.2E-05 26.4 1.2 12 97-108 3-14 (33)
108 3qww_A SET and MYND domain-con 68.7 4.4 0.00015 39.0 4.6 31 238-268 5-35 (433)
109 2d8t_A Dactylidin, ring finger 68.0 1.1 3.8E-05 31.5 0.1 45 58-109 14-58 (71)
110 1e8j_A Rubredoxin; iron-sulfur 67.9 5.1 0.00018 27.0 3.4 18 92-110 29-46 (52)
111 2ysl_A Tripartite motif-contai 65.4 2.1 7.2E-05 29.9 1.1 47 59-109 20-66 (73)
112 1yk4_A Rubredoxin, RD; electro 63.9 4.2 0.00014 27.5 2.4 17 93-110 29-45 (52)
113 3l11_A E3 ubiquitin-protein li 63.6 2.7 9.2E-05 32.4 1.6 45 59-109 15-59 (115)
114 2lk0_A RNA-binding protein 5; 63.0 1.8 6E-05 26.3 0.3 11 98-108 3-13 (32)
115 1dx8_A Rubredoxin; electron tr 62.9 3.9 0.00014 29.4 2.2 18 92-110 33-50 (70)
116 3nw0_A Non-structural maintena 62.3 2.1 7.3E-05 38.1 0.8 47 59-109 180-226 (238)
117 2ecn_A Ring finger protein 141 62.2 1.4 4.6E-05 30.8 -0.4 44 58-109 14-57 (70)
118 1e4u_A Transcriptional repress 62.0 3.4 0.00012 30.0 1.8 49 58-110 10-60 (78)
119 1s24_A Rubredoxin 2; electron 61.5 3.9 0.00013 30.8 2.0 22 88-110 57-78 (87)
120 2csy_A Zinc finger protein 183 60.7 2.2 7.5E-05 30.7 0.5 46 58-110 14-59 (81)
121 2ea6_A Ring finger protein 4; 60.3 0.77 2.6E-05 31.8 -2.0 48 58-109 14-65 (69)
122 2v3b_B Rubredoxin 2, rubredoxi 60.2 4.7 0.00016 27.6 2.1 17 93-110 30-46 (55)
123 2ct2_A Tripartite motif protei 59.8 1.8 6E-05 31.5 -0.2 51 58-109 14-65 (88)
124 2lq6_A Bromodomain-containing 59.4 2.8 9.5E-05 31.4 0.9 31 59-90 17-49 (87)
125 2ysj_A Tripartite motif-contai 58.4 1.2 4.3E-05 30.4 -1.2 44 59-106 20-63 (63)
126 2ckl_B Ubiquitin ligase protei 58.2 1.5 5.2E-05 36.2 -0.8 46 59-109 54-99 (165)
127 4b2u_A S67; toxin, ICK; NMR {S 57.8 2.5 8.5E-05 25.4 0.3 13 98-110 16-28 (36)
128 3lrq_A E3 ubiquitin-protein li 57.5 1.5 5E-05 33.3 -1.0 47 59-110 22-68 (100)
129 6rxn_A Rubredoxin; electron tr 57.4 5.9 0.0002 26.1 2.1 34 76-110 6-40 (46)
130 3qwp_A SET and MYND domain-con 56.3 9.5 0.00033 36.5 4.4 30 239-268 4-33 (429)
131 3smt_A Histone-lysine N-methyl 56.0 13 0.00043 36.6 5.2 35 235-269 87-122 (497)
132 3ng2_A RNF4, snurf, ring finge 55.4 1.2 4.1E-05 31.0 -1.7 48 58-109 9-60 (71)
133 4ayc_A E3 ubiquitin-protein li 53.6 2.6 8.9E-05 33.8 -0.1 44 59-109 53-96 (138)
134 1weo_A Cellulose synthase, cat 53.5 2 6.8E-05 32.5 -0.8 48 58-108 15-66 (93)
135 2ecv_A Tripartite motif-contai 52.0 3.7 0.00013 29.3 0.5 49 59-110 19-69 (85)
136 1vtp_A Na-propi, vacuolar targ 50.9 0.82 2.8E-05 25.9 -2.4 11 265-275 6-16 (26)
137 1jm7_A BRCA1, breast cancer ty 50.4 4.2 0.00014 30.8 0.6 47 59-109 21-67 (112)
138 1flt_X FLT-1, VGR1, FMS-like t 50.4 7.9 0.00027 29.3 2.2 29 241-269 50-78 (95)
139 2xeu_A Ring finger protein 4; 49.3 0.99 3.4E-05 30.7 -2.9 47 59-109 3-53 (64)
140 1chc_A Equine herpes virus-1 r 49.2 2.4 8.1E-05 29.3 -1.0 45 59-109 5-49 (68)
141 2yur_A Retinoblastoma-binding 48.7 3.9 0.00013 28.9 0.1 48 58-109 14-61 (74)
142 3fl2_A E3 ubiquitin-protein li 48.5 1.7 6E-05 34.1 -2.0 46 59-110 52-97 (124)
143 4rxn_A Rubredoxin; electron tr 46.7 9.7 0.00033 25.9 1.9 34 76-110 5-46 (54)
144 1t1h_A Gspef-atpub14, armadill 46.7 5.9 0.0002 28.0 0.9 47 58-110 7-53 (78)
145 2djb_A Polycomb group ring fin 46.6 3.3 0.00011 29.0 -0.5 46 58-109 14-59 (72)
146 2ecw_A Tripartite motif-contai 46.4 3.6 0.00012 29.3 -0.3 49 59-110 19-69 (85)
147 1g25_A CDK-activating kinase a 44.2 4.7 0.00016 27.5 -0.0 49 59-110 3-53 (65)
148 1kvd_B SMK toxin; halotolerant 43.4 10 0.00035 26.4 1.6 15 252-266 7-21 (77)
149 1jm7_B BARD1, BRCA1-associated 40.0 16 0.00055 28.0 2.6 44 59-110 22-65 (117)
150 1faq_A RAF-1; transferase, ser 39.8 14 0.00049 24.1 1.9 30 59-90 14-43 (52)
151 2d8v_A Zinc finger FYVE domain 39.3 12 0.00041 26.5 1.5 23 55-81 4-26 (67)
152 4ap4_A E3 ubiquitin ligase RNF 38.9 2.2 7.5E-05 33.3 -2.8 48 58-109 71-122 (133)
153 2ckl_A Polycomb group ring fin 38.1 8 0.00027 29.3 0.4 45 59-109 15-59 (108)
154 3qxy_A N-lysine methyltransfer 37.7 22 0.00074 34.3 3.6 52 219-270 14-69 (449)
155 2h21_A Ribulose-1,5 bisphospha 37.1 31 0.0011 32.9 4.5 36 235-270 15-52 (440)
156 1n0z_A ZNF265; zinc finger, RN 35.8 20 0.00069 23.2 2.1 14 95-108 9-24 (45)
157 2y43_A E3 ubiquitin-protein li 34.8 7.3 0.00025 29.0 -0.3 46 59-110 22-67 (99)
158 3ztg_A E3 ubiquitin-protein li 34.5 4.3 0.00015 29.7 -1.6 48 58-109 12-59 (92)
159 1v5n_A PDI-like hypothetical p 32.7 15 0.00052 27.3 1.2 32 60-92 48-79 (89)
160 1kbe_A Kinase suppressor of RA 32.0 16 0.00055 24.2 1.1 29 60-90 15-43 (49)
161 1zfo_A LAsp-1; LIM domain, zin 30.6 18 0.00063 21.2 1.1 28 60-89 4-31 (31)
162 1z6u_A NP95-like ring finger p 30.2 8.1 0.00028 31.5 -0.8 46 59-110 78-123 (150)
163 2enn_A NPKC-theta, protein kin 30.1 21 0.00072 25.6 1.6 33 59-91 34-68 (77)
164 2a20_A Regulating synaptic mem 29.7 7.5 0.00026 27.0 -0.9 52 58-109 8-60 (62)
165 1pju_A Wound-induced proteinas 29.4 20 0.00068 28.4 1.4 20 249-274 94-113 (123)
166 1fyb_A Na-propi, proteinase in 29.1 18 0.00063 28.1 1.1 20 249-274 69-88 (111)
167 2k0a_A PRE-mRNA-splicing facto 28.6 10 0.00035 29.3 -0.4 50 59-108 29-80 (109)
168 2fnf_X Putative RAS effector N 28.4 27 0.00091 24.9 1.9 31 59-90 35-65 (72)
169 1ce3_A Protein (API); protease 27.4 21 0.00071 24.3 1.0 8 261-268 44-51 (54)
170 2y1n_A E3 ubiquitin-protein li 26.3 8.8 0.0003 36.7 -1.4 45 59-109 332-376 (389)
171 2enz_A NPKC-theta, protein kin 24.7 42 0.0014 23.0 2.3 32 59-90 23-56 (65)
172 2yuu_A NPKC-delta, protein kin 24.7 36 0.0012 24.7 2.0 32 59-90 28-61 (83)
173 1ptq_A Protein kinase C delta 24.3 26 0.0009 22.5 1.1 32 59-90 11-44 (50)
174 2zet_C Melanophilin; complex, 23.4 29 0.001 28.5 1.5 51 57-110 66-118 (153)
175 1yuz_A Nigerythrin; rubrythrin 23.0 40 0.0014 28.9 2.3 27 73-110 170-196 (202)
176 2hfr_A Fowlicidin-3, cathelici 22.2 25 0.00084 19.9 0.5 11 159-169 1-11 (27)
177 2eli_A Protein kinase C alpha 22.2 44 0.0015 24.3 2.1 32 59-90 28-61 (85)
178 4b2v_A S64; toxin, ICK; NMR {S 22.0 41 0.0014 19.6 1.4 12 98-109 16-27 (32)
179 4sgb_I Potato inhibitor, PCI-1 21.8 35 0.0012 22.6 1.3 12 261-274 18-29 (51)
180 2pk7_A Uncharacterized protein 20.8 37 0.0013 24.1 1.4 26 59-84 8-36 (69)
181 1rfh_A RAS association (ralgds 20.4 26 0.00088 23.8 0.4 31 59-90 22-52 (59)
182 2l7p_A Histone-lysine N-methyl 20.3 20 0.00068 27.5 -0.2 32 72-105 26-58 (100)
183 2js4_A UPF0434 protein BB2007; 20.2 35 0.0012 24.3 1.1 26 59-84 8-36 (70)
184 2hf1_A Tetraacyldisaccharide-1 20.1 33 0.0011 24.3 1.0 26 59-84 8-36 (68)
185 2jr6_A UPF0434 protein NMA0874 20.0 36 0.0012 24.1 1.1 27 59-85 8-37 (68)
No 1
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=99.79 E-value=5.6e-20 Score=166.94 Aligned_cols=147 Identities=19% Similarity=0.275 Sum_probs=105.4
Q ss_pred HhhhcCCCCCCCcchh--hhhh-hhhhhhhhhccCccCCCCCCCCCCCCccccChhhhhccCccccChhhhHHHHHHHHH
Q 020737 157 KRRRLLPFTPSEDRSQ--RLSQ-MGSLAHALTALQMEFSDDLTYMPGMAPRSANQAEFEEGGMQVLSKEDTETLEQCRAM 233 (322)
Q Consensus 157 ~~r~~lp~vp~~d~~~--~le~-~asl~tal~~~g~~fs~~l~y~pg~a~~~~N~~~~e~~~~~v~~~ed~~~~~~~~r~ 233 (322)
..++..||++...+.. ++.. .+++ +....+....+++..+ |....+.|++...+|+...++-.+.|. +|+
T Consensus 13 ~~~~pp~y~~i~~n~~~~~~~~~~~~~-~~~~~C~C~~~~~~~C--~~~~~C~nr~~~~EC~~~~C~c~~~C~----Nr~ 85 (232)
T 3ooi_A 13 NDKKPPPYKHIKVNRPIGRVQIFTADL-SEIPRCNCKATDENPC--GIDSECINRMLLYECHPTVCPAGGRCQ----NQC 85 (232)
T ss_dssp HCCSCCCCEECSSCEECTTCCCCCCCG-GGSCCCSCCTTSSSTT--CTTSCCHHHHTTBCCCTTTCTTGGGCC----CCH
T ss_pred cCCCCCCceEeeccccccccccccCCc-ccCCcccccCCCCCCC--CCCCCCcCcCceeEeCCCCCCCCCCcC----Ccc
Confidence 3356666765554321 1111 1222 3455677777766666 666789999999999998887766544 466
Q ss_pred HHhCCCCCeEEEEeCCCceeeeecccCCCCceeEEeeeeehhhhhhh--------ccCCCceeeeeccCCCCCcEEEcCC
Q 020737 234 CKRGECPPLVVVYDSCEGFTVEADGQIKDMTFIAEYIGDVDFIRNRE--------HDDCDSMMTLLLATDPSKSLVICPD 305 (322)
Q Consensus 234 ~q~g~~~~l~v~~~~~kG~gv~a~~~I~~g~fv~EY~Gev~~~~~~~--------~~~~~~~~~~~~~~~~~~~~vIda~ 305 (322)
+|+|.+++|+||++..+||||+|.++|++|+||+||+|||+...+.. .+..+.++..+. ..++|||+
T Consensus 86 ~q~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~l~-----~~~~IDa~ 160 (232)
T 3ooi_A 86 FSKRQYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRYAQEHDITNFYMLTLD-----KDRIIDAG 160 (232)
T ss_dssp HHHTCCCCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHHHHHHTTCCCCCEEEEE-----TTEEEEEE
T ss_pred ccCCCCccEEEEEcCCceeEEEECceecCCceeeEeeeeccCHHHHHHHHHHHhhcCCCceeeeecC-----cceEEecc
Confidence 79999999999999999999999999999999999999995433211 122223333332 35899999
Q ss_pred CCCCeeeecc
Q 020737 306 KRGNIARFIN 315 (322)
Q Consensus 306 ~~GNiaRFiN 315 (322)
.+||+|||||
T Consensus 161 ~~Gn~aRfiN 170 (232)
T 3ooi_A 161 PKGNYARFMN 170 (232)
T ss_dssp EEECGGGGCE
T ss_pred cccccccccc
Confidence 9999999997
No 2
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=99.74 E-value=5e-19 Score=166.29 Aligned_cols=86 Identities=23% Similarity=0.308 Sum_probs=67.9
Q ss_pred HHHHHhCCCCCeEEEEeCCCceeeeecccCCCCceeEEeeeeehhhhhh-----hcc-CCCceeeeeccCCCCCcEEEcC
Q 020737 231 RAMCKRGECPPLVVVYDSCEGFTVEADGQIKDMTFIAEYIGDVDFIRNR-----EHD-DCDSMMTLLLATDPSKSLVICP 304 (322)
Q Consensus 231 ~r~~q~g~~~~l~v~~~~~kG~gv~a~~~I~~g~fv~EY~Gev~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~vIda 304 (322)
+|++|+|...+|+||++..+||||+|.++|++|+||+||+|||+...+. .++ .++.++..|........++|||
T Consensus 128 Nr~~q~g~~~~l~v~~t~~~G~Gv~A~~~I~kG~~I~EY~Gevi~~~ea~~R~~~y~~~~~~Y~f~l~~~~~~~~~~IDa 207 (299)
T 1mvh_A 128 NRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNYDDDGITYLFDLDMFDDASEYTVDA 207 (299)
T ss_dssp TCTGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTTCCSCSCCCEEEECSSCSSSCEEEEC
T ss_pred CccccccccccEEEEEcCCCcceEeeCceeCCCCEEEEeeeEECcHHHHHHHHHhhhccCceEEEEecCCCCCccEEEeC
Confidence 5778999999999999999999999999999999999999999654332 232 2333444444333345799999
Q ss_pred CCCCCeeeeccC
Q 020737 305 DKRGNIARFING 316 (322)
Q Consensus 305 ~~~GNiaRFiN~ 316 (322)
+++||+|||||-
T Consensus 208 ~~~GN~aRfiNH 219 (299)
T 1mvh_A 208 QNYGDVSRFFNH 219 (299)
T ss_dssp SSEECGGGGCEE
T ss_pred cccCChhheEee
Confidence 999999999983
No 3
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=99.73 E-value=7.5e-19 Score=158.50 Aligned_cols=107 Identities=25% Similarity=0.314 Sum_probs=82.5
Q ss_pred CCCccccChhhhhccCccccChhhhHHHHHHHHHHHhCCCCC-eEEEEeCCCceeeeecccCCCCceeEEeeeeehhhhh
Q 020737 200 GMAPRSANQAEFEEGGMQVLSKEDTETLEQCRAMCKRGECPP-LVVVYDSCEGFTVEADGQIKDMTFIAEYIGDVDFIRN 278 (322)
Q Consensus 200 g~a~~~~N~~~~e~~~~~v~~~ed~~~~~~~~r~~q~g~~~~-l~v~~~~~kG~gv~a~~~I~~g~fv~EY~Gev~~~~~ 278 (322)
+....+.|++...+|+...++=.+. ..+|++|+|.+.+ |+||+++.+||||+|.++|++|+||+||+|||+...+
T Consensus 37 ~c~~~C~nr~~~~EC~~~~C~C~~~----C~Nr~~q~~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e 112 (222)
T 3ope_A 37 GCVDDCLNRMIFAECSPNTCPCGEQ----CCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQE 112 (222)
T ss_dssp SSCSCCTTGGGTBCCCTTTCTTTTS----CSSCTTTTTCCCSCCEEEECTTSSEEEECSSCBCTTCEEEECCSEEECHHH
T ss_pred CCcccCcCcCeEeEeCCCCCcCCCC----CCCceEeCCCccccEEEEEcCCCceEEEECceECCCCEEEEecceecCHHH
Confidence 4556899999999999877765443 3467889998875 9999999999999999999999999999999954433
Q ss_pred hh------cc-CCCceeeeeccCCCCCcEEEcCCCCCCeeeecc
Q 020737 279 RE------HD-DCDSMMTLLLATDPSKSLVICPDKRGNIARFIN 315 (322)
Q Consensus 279 ~~------~~-~~~~~~~~~~~~~~~~~~vIda~~~GNiaRFiN 315 (322)
.. +. ..+.++..+ ...++|||+.+||+|||||
T Consensus 113 ~~~r~~~~~~~~~~~y~~~l-----~~~~~IDa~~~Gn~aRfiN 151 (222)
T 3ope_A 113 FRNRMIEQYHNHSDHYCLNL-----DSGMVIDSYRMGNEARFIN 151 (222)
T ss_dssp HHHHHHHTSTTCCSCCEEEE-----ETTEEEECSSEECGGGGCE
T ss_pred HHHHHHHHhcccCCeEEEec-----CCCEEEeCccccccceeec
Confidence 21 11 122222222 2358999999999999996
No 4
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=99.73 E-value=8.5e-19 Score=163.80 Aligned_cols=84 Identities=25% Similarity=0.303 Sum_probs=69.9
Q ss_pred HHHHHhCCCCCeEEEEeCCCceeeeecccCCCCceeEEeeeeehhhhhhhccCCCceeeeeccCCCCCcEEEcCCCCCCe
Q 020737 231 RAMCKRGECPPLVVVYDSCEGFTVEADGQIKDMTFIAEYIGDVDFIRNREHDDCDSMMTLLLATDPSKSLVICPDKRGNI 310 (322)
Q Consensus 231 ~r~~q~g~~~~l~v~~~~~kG~gv~a~~~I~~g~fv~EY~Gev~~~~~~~~~~~~~~~~~~~~~~~~~~~vIda~~~GNi 310 (322)
+|++|+|..++|+||++..+||||+|.++|++|+||+||+|||+...+.+.+..+.++..+...+ ...++|||+++||+
T Consensus 138 Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~eY~Gevi~~~e~~~r~~~~Y~f~l~~~~-~~~~~IDa~~~GN~ 216 (287)
T 3hna_A 138 NRVVQNGLRARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELISDSEADVREEDSYLFDLDNKD-GEVYCIDARFYGNV 216 (287)
T ss_dssp SCSGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEEECEEEEEHHHHHTCSCCTTEEESCCSS-SSCEEEEEEEEECG
T ss_pred CcccCcCCcccEEEEEcCCCceEEEeCcccCCCCEEEEeeeEEccHHHHhhhcccceEEEeccCC-CceEEEeccccCCc
Confidence 56789999999999999999999999999999999999999998776665555555554443322 24589999999999
Q ss_pred eeecc
Q 020737 311 ARFIN 315 (322)
Q Consensus 311 aRFiN 315 (322)
|||||
T Consensus 217 aRFiN 221 (287)
T 3hna_A 217 SRFIN 221 (287)
T ss_dssp GGGCE
T ss_pred hheee
Confidence 99998
No 5
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=99.73 E-value=9.8e-19 Score=164.59 Aligned_cols=85 Identities=24% Similarity=0.382 Sum_probs=65.7
Q ss_pred HHHHHhCCCCCeEEEEeCCCceeeeecccCCCCceeEEeeeeehhhhhhhc--------cCCCceeeeecc-CCC-----
Q 020737 231 RAMCKRGECPPLVVVYDSCEGFTVEADGQIKDMTFIAEYIGDVDFIRNREH--------DDCDSMMTLLLA-TDP----- 296 (322)
Q Consensus 231 ~r~~q~g~~~~l~v~~~~~kG~gv~a~~~I~~g~fv~EY~Gev~~~~~~~~--------~~~~~~~~~~~~-~~~----- 296 (322)
+|++|+|...+|+||++..+||||+|.++|++|+||+||+|||+...+.+. ...+.++..|.. .++
T Consensus 124 Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~~~~~~~~~~Y~f~l~~~~~~~~~d~ 203 (302)
T 1ml9_A 124 NRVVERGRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEIITSEEADRRRAESTIARRKDVYLFALDKFSDPDSLDP 203 (302)
T ss_dssp TCHHHHCCCSCEEEEECSSSCEEEECSSCBCTTCEEEECCCEEECHHHHHHHHHHSCGGGCHHHHEEECCSSCCSSSSCH
T ss_pred CcccccCCccceEEEEcCCCceEEEECCeeCCCCEEEEEeeEEeCHHHHHHHHHHHhhhcCCceEEEEeccccCcccccc
Confidence 567899999999999999999999999999999999999999965443221 112233333332 111
Q ss_pred ---CCcEEEcCCCCCCeeeecc
Q 020737 297 ---SKSLVICPDKRGNIARFIN 315 (322)
Q Consensus 297 ---~~~~vIda~~~GNiaRFiN 315 (322)
...++|||+++||+|||||
T Consensus 204 ~~~~~~~~IDa~~~GN~arfiN 225 (302)
T 1ml9_A 204 LLAGQPLEVDGEYMSGPTRFIN 225 (302)
T ss_dssp HHHSCCCEEECSSEECGGGGCE
T ss_pred cccCCcEEEeCcccCCHHHhcc
Confidence 1368999999999999998
No 6
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=99.72 E-value=5.4e-18 Score=145.74 Aligned_cols=90 Identities=20% Similarity=0.238 Sum_probs=71.4
Q ss_pred hHHHHHHHHHHHhCCCCCeEEEEeCCCceeeeecccCCCCceeEEeeeeehhhhhh-----hcc---CCCceeeeeccCC
Q 020737 224 TETLEQCRAMCKRGECPPLVVVYDSCEGFTVEADGQIKDMTFIAEYIGDVDFIRNR-----EHD---DCDSMMTLLLATD 295 (322)
Q Consensus 224 ~~~~~~~~r~~q~g~~~~l~v~~~~~kG~gv~a~~~I~~g~fv~EY~Gev~~~~~~-----~~~---~~~~~~~~~~~~~ 295 (322)
.|.....+|++|+|...+|+|+.++.+||||+|.++|++|+||+||+|||+...+. .++ ....+++.+...
T Consensus 14 ~e~~~~~~~~~q~g~~~~l~v~~~~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~y~~~~~~~- 92 (166)
T 3f9x_A 14 SEERKRIDELIESGKEEGMKIDLIDGKGRGVIATKQFSRGDFVVEYHGDLIEITDAKKREALYAQDPSTGCYMYYFQYL- 92 (166)
T ss_dssp HHHHHHHHHHHHHTCCTTEEEEEETTTEEEEEESSCBCTTCEEEECCSEEEEHHHHHHHHHHHTTCTTSCCCEEEEEET-
T ss_pred HHHHHHHHHHHHcCCccCeEEEECCCceeEEEECCCcCCCCEEEEeeceEcCHHHHHHHHHHHhhccCCCceEEEEecC-
Confidence 46678899999999999999999999999999999999999999999999543221 122 123334443322
Q ss_pred CCCcEEEcCCCC-CCeeeecc
Q 020737 296 PSKSLVICPDKR-GNIARFIN 315 (322)
Q Consensus 296 ~~~~~vIda~~~-GNiaRFiN 315 (322)
...++|||+.+ ||+|||||
T Consensus 93 -~~~~~iDa~~~~Gn~aRfiN 112 (166)
T 3f9x_A 93 -SKTYCVDATRETNRLGRLIN 112 (166)
T ss_dssp -TEEEEEECCSCCSCSGGGCE
T ss_pred -CCCeEEechhcCCChhheee
Confidence 34689999997 99999997
No 7
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=99.72 E-value=1e-18 Score=163.58 Aligned_cols=86 Identities=20% Similarity=0.285 Sum_probs=66.3
Q ss_pred HHHHHhCCCCCeEEEEeCCCceeeeecccCCCCceeEEeeeeehhhhhhh-----cc--CCCceeeeeccC--CCCCcEE
Q 020737 231 RAMCKRGECPPLVVVYDSCEGFTVEADGQIKDMTFIAEYIGDVDFIRNRE-----HD--DCDSMMTLLLAT--DPSKSLV 301 (322)
Q Consensus 231 ~r~~q~g~~~~l~v~~~~~kG~gv~a~~~I~~g~fv~EY~Gev~~~~~~~-----~~--~~~~~~~~~~~~--~~~~~~v 301 (322)
+|++|+|++++|+||++..+||||+|.++|++|+||+||+|||+...+.+ ++ ..+|++.+..+. +....++
T Consensus 117 Nr~~q~g~~~~l~V~~s~~~G~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~~~~~~~~Y~~~l~~~~~~~~~~~~~ 196 (290)
T 3bo5_A 117 NRVVQKGLQFHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEVLGFSEVQRRIHLQTKSDSNYIIAIREHVYNGQVMETF 196 (290)
T ss_dssp TCCGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHTTCCSSCCCCCEEEEECC-----EEEE
T ss_pred CeEcccCCcccEEEEEcCCCcceEeECCccCCCCEEEEEeeEEeCHHHHHHHHHhhcccCCcceeeecccccCCccceeE
Confidence 56779999999999999999999999999999999999999996543322 11 334555443321 1223578
Q ss_pred EcCCCCCCeeeeccC
Q 020737 302 ICPDKRGNIARFING 316 (322)
Q Consensus 302 Ida~~~GNiaRFiN~ 316 (322)
|||+++||+|||||-
T Consensus 197 IDa~~~GN~arfiNH 211 (290)
T 3bo5_A 197 VDPTYIGNIGRFLNH 211 (290)
T ss_dssp EEEEEEECGGGGCEE
T ss_pred EeeeecCCchheeee
Confidence 999999999999973
No 8
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=99.70 E-value=7.1e-18 Score=156.83 Aligned_cols=102 Identities=21% Similarity=0.258 Sum_probs=79.3
Q ss_pred cccChhhhhccCccccChhhhHHHHHHHHHHHhCCCCCeEEEEeCCCceeeeecccCCCCceeEEeeeeehhhhhh----
Q 020737 204 RSANQAEFEEGGMQVLSKEDTETLEQCRAMCKRGECPPLVVVYDSCEGFTVEADGQIKDMTFIAEYIGDVDFIRNR---- 279 (322)
Q Consensus 204 ~~~N~~~~e~~~~~v~~~ed~~~~~~~~r~~q~g~~~~l~v~~~~~kG~gv~a~~~I~~g~fv~EY~Gev~~~~~~---- 279 (322)
.+.|++...+|+. .++-.+.|. +|++|+|.+++|+||++..+||||+|.++|++|+||+||+|||+...+.
T Consensus 86 ~C~nr~~~~EC~~-~C~C~~~C~----Nr~~q~g~~~~leV~~t~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~ 160 (278)
T 3h6l_A 86 DCLNRLLMIECSS-RCPNGDYCS----NRRFQRKQHADVEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVLDHKEFKARV 160 (278)
T ss_dssp TCTTGGGTBCCCT-TCTTGGGCS----SCTTTTTCCCCEEEEECSSSCEEEEESSCBCTTCEEEECCCEEECHHHHHHHH
T ss_pred CCCCcceEeccCC-CCCcCCCCC----CccccCCCccCEEEEEcCCCceEEEeCCccCCCCEeEEeeeeecCHHHHHHHH
Confidence 7999999999884 566544333 5779999999999999999999999999999999999999999544332
Q ss_pred -hcc--C-CCceeeeeccCCCCCcEEEcCCCCCCeeeecc
Q 020737 280 -EHD--D-CDSMMTLLLATDPSKSLVICPDKRGNIARFIN 315 (322)
Q Consensus 280 -~~~--~-~~~~~~~~~~~~~~~~~vIda~~~GNiaRFiN 315 (322)
.++ . ..+++..+. ..++|||+.+||+|||||
T Consensus 161 ~~y~~~~~~~~y~~~l~-----~~~~IDa~~~GN~aRFiN 195 (278)
T 3h6l_A 161 KEYARNKNIHYYFMALK-----NDEIIDATQKGNCSRFMN 195 (278)
T ss_dssp HHHHHTTCCCCCEEEEE-----TTEEEECSSEECGGGGCE
T ss_pred HHHHhccCccceeeccc-----CCeEEeCcccCChhhhcc
Confidence 221 1 122222221 358999999999999997
No 9
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=99.68 E-value=5.9e-18 Score=158.98 Aligned_cols=83 Identities=25% Similarity=0.391 Sum_probs=64.5
Q ss_pred HHHHHhCCCCCeEEEEeC-CCceeeeecccCCCCceeEEeeeeehhhhhhh-----ccC-CCceeeeeccCCCCCcEEEc
Q 020737 231 RAMCKRGECPPLVVVYDS-CEGFTVEADGQIKDMTFIAEYIGDVDFIRNRE-----HDD-CDSMMTLLLATDPSKSLVIC 303 (322)
Q Consensus 231 ~r~~q~g~~~~l~v~~~~-~kG~gv~a~~~I~~g~fv~EY~Gev~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~vId 303 (322)
+|++|+|...+|+||++. .+||||+|.++|++|+||+||+|||+...+.+ |+. +..++..|.. ....++||
T Consensus 131 Nr~~q~g~~~~l~vfrt~~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~ea~~R~~~y~~~~~~Y~f~l~~--~~~~~~ID 208 (300)
T 2r3a_A 131 NRIVQKGTQYSLCIFRTSNGRGWGVKTLVKIKRMSFVMEYVGEVITSEEAERRGQFYDNKGITYLFDLDY--ESDEFTVD 208 (300)
T ss_dssp TCSGGGCCCSCEEEEECSSSCCEEEEESSCBCTTCEEEEECCEEEEHHHHHHHHHTCCHHHHHTEEECCS--SCSSEEEE
T ss_pred CccccccccccEEEEEeCCCceEEEEeCccccCCCEeEEEeeEEecHHHHHHHHHHhhhccccEEEEeec--CCceEEEe
Confidence 567899999999999997 69999999999999999999999996544322 221 2223333322 23468999
Q ss_pred CCCCCCeeeecc
Q 020737 304 PDKRGNIARFIN 315 (322)
Q Consensus 304 a~~~GNiaRFiN 315 (322)
|+++||+|||||
T Consensus 209 a~~~GN~aRfiN 220 (300)
T 2r3a_A 209 AARYGNVSHFVN 220 (300)
T ss_dssp CSSEECGGGGCE
T ss_pred cccccChHHhee
Confidence 999999999998
No 10
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=99.60 E-value=2.4e-16 Score=139.06 Aligned_cols=79 Identities=24% Similarity=0.221 Sum_probs=61.0
Q ss_pred HHHHhCCCCCeEEEEeCCCceeeeecccCCCCceeEEeeeeehhhhhh-----hccC--CCceeeeeccCCCCCcEEEcC
Q 020737 232 AMCKRGECPPLVVVYDSCEGFTVEADGQIKDMTFIAEYIGDVDFIRNR-----EHDD--CDSMMTLLLATDPSKSLVICP 304 (322)
Q Consensus 232 r~~q~g~~~~l~v~~~~~kG~gv~a~~~I~~g~fv~EY~Gev~~~~~~-----~~~~--~~~~~~~~~~~~~~~~~vIda 304 (322)
+.+|+|...+|+|+++..+||||+|.++|++|+||+||+|||+...+. .++. ...++..+ ...++|||
T Consensus 44 ~~l~~~~~~~l~V~~s~~~G~GlfA~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y~~~~~~~Y~f~l-----~~~~~IDa 118 (192)
T 2w5y_A 44 RHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKREKYYDSKGIGCYMFRI-----DDSEVVDA 118 (192)
T ss_dssp TTHHHHHHHHEEEEECSSSSEEEEESSCBCTTCEEEECCSEEEEGGGHHHHHHHHHHHTCCCCEEEC-----SSSEEEEC
T ss_pred HHHhccCCCcEEEEEcCCceeEEEECcccCCCCEEEEeeeeEechHHHHHHHHHHhhcCCceeeeee-----cCceEEEC
Confidence 445777888999999999999999999999999999999999644321 1221 12222222 23589999
Q ss_pred CCCCCeeeecc
Q 020737 305 DKRGNIARFIN 315 (322)
Q Consensus 305 ~~~GNiaRFiN 315 (322)
+.+||+|||||
T Consensus 119 ~~~Gn~arfiN 129 (192)
T 2w5y_A 119 TMHGNAARFIN 129 (192)
T ss_dssp TTTCCGGGGCE
T ss_pred ccccChhHhhc
Confidence 99999999997
No 11
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=99.53 E-value=4.1e-15 Score=107.34 Aligned_cols=52 Identities=40% Similarity=1.004 Sum_probs=47.2
Q ss_pred cccccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 55 GDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 55 ~~~~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
++.++.+|.+|+.+ +.||+||.|+++||+.|++|++..+|+|+|+|+.|...
T Consensus 5 ~d~~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 5 SDHHMEFCRVCKDG---GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SCSSCSSCTTTCCC---SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred ccCCCCcCCCCCCC---CCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCc
Confidence 34557889999986 89999999999999999999999999999999999864
No 12
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.53 E-value=2.6e-15 Score=104.48 Aligned_cols=48 Identities=44% Similarity=1.139 Sum_probs=45.4
Q ss_pred cccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCccccc
Q 020737 61 GCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSG 108 (322)
Q Consensus 61 ~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~ 108 (322)
.|.+|+++.+.+.||+||.|+++||+.|++|++..+|+|+|+|+.|..
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 599999988888999999999999999999999999999999999975
No 13
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=99.52 E-value=3.3e-15 Score=109.55 Aligned_cols=52 Identities=37% Similarity=0.935 Sum_probs=47.5
Q ss_pred cccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccCCc
Q 020737 57 YGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRR 111 (322)
Q Consensus 57 ~~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~~~ 111 (322)
.++.+|.+|+.+ +.||+||.|+++||+.|++|||..+|.|+|+|+.|..++.
T Consensus 6 ~~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~~ 57 (66)
T 1xwh_A 6 KNEDECAVCRDG---GELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATV 57 (66)
T ss_dssp SCCCSBSSSSCC---SSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHTCC
T ss_pred CCCCCCccCCCC---CCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCccc
Confidence 457889999987 8999999999999999999999999999999999987654
No 14
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.51 E-value=4.4e-15 Score=105.36 Aligned_cols=50 Identities=34% Similarity=0.999 Sum_probs=45.9
Q ss_pred ccccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCccccc
Q 020737 56 DYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSG 108 (322)
Q Consensus 56 ~~~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~ 108 (322)
+.++.+|.+|+.+ +.||+||.|+++||+.|++|||..+|+|+|+|+.|..
T Consensus 6 ~~~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 6 SGHEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp CSSCCSCSSSCCS---SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCCCccCCCC---CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 3447889999987 7999999999999999999999999999999999975
No 15
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=99.50 E-value=8.7e-15 Score=107.19 Aligned_cols=50 Identities=32% Similarity=0.746 Sum_probs=45.5
Q ss_pred ccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccCC
Q 020737 58 GDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 58 ~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~~ 110 (322)
....|.+|+++ +.||+||.|+++||++|++|+|..+|.|+|||+.|....
T Consensus 11 ~~~~C~vC~~~---~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 11 PGARCGVCGDG---TDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDV 60 (66)
T ss_dssp TTCCCTTTSCC---TTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCC
T ss_pred CCCCcCCCCCC---CeEEECCCCCCceecccCCCccCcCCCCCEECccccCCC
Confidence 35679999976 789999999999999999999999999999999998654
No 16
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=99.50 E-value=7.1e-15 Score=106.11 Aligned_cols=51 Identities=39% Similarity=1.008 Sum_probs=46.6
Q ss_pred ccccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 56 DYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 56 ~~~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
+.++.+|.+|+.+ +.||+||.|+++||+.|++|++..+|+|+|+|+.|..+
T Consensus 8 ~~~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 8 TDHQDYCEVCQQG---GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp SCCCSSCTTTSCC---SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred CCCCCCCccCCCC---CcEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 4457889999986 89999999999999999999999999999999999864
No 17
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.49 E-value=1.6e-14 Score=111.23 Aligned_cols=52 Identities=29% Similarity=0.737 Sum_probs=47.4
Q ss_pred ccccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccCC
Q 020737 56 DYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 56 ~~~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~~ 110 (322)
+.++.+|.+|+.+ +.||+||.|+++||+.|+.|++..+|+|+|+|+.|....
T Consensus 22 d~n~~~C~vC~~~---g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 22 DDSATICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 73 (88)
T ss_dssp SSSSSCCSSSCSS---SCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred CCCCCcCcCcCCC---CCEEECCCCCCceecccCCCCCCCCcCCCcCCccccCCC
Confidence 4457899999987 789999999999999999999999999999999998643
No 18
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=7.8e-15 Score=114.49 Aligned_cols=53 Identities=38% Similarity=0.980 Sum_probs=48.7
Q ss_pred cccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 57 YGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 57 ~~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
.++..|.+|+.+.+.+.||+||.|+++||+.|++|||..+|+|+|+|+.|...
T Consensus 14 ~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 14 IDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred cCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCc
Confidence 44678999999877789999999999999999999999999999999999864
No 19
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=99.47 E-value=1.1e-14 Score=104.64 Aligned_cols=50 Identities=36% Similarity=1.036 Sum_probs=46.0
Q ss_pred cccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 57 YGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 57 ~~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
.++..|.+|+.+ +.||+||.|+++||+.|++||+..+|.|+|+|+.|...
T Consensus 3 ~~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 52 (60)
T 2puy_A 3 IHEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 52 (60)
T ss_dssp CCCSSCTTTCCC---SSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHH
T ss_pred CCCCCCcCCCCC---CcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccCh
Confidence 346889999987 89999999999999999999999999999999999763
No 20
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=99.43 E-value=3.9e-14 Score=120.06 Aligned_cols=83 Identities=16% Similarity=0.107 Sum_probs=62.5
Q ss_pred HHHHHHhCCCCCeEEEEeC--CCceeeeecccCCCCceeEEeeeeehhhhhhhccCCCceeeeeccCCCCCcEEEcCCC-
Q 020737 230 CRAMCKRGECPPLVVVYDS--CEGFTVEADGQIKDMTFIAEYIGDVDFIRNREHDDCDSMMTLLLATDPSKSLVICPDK- 306 (322)
Q Consensus 230 ~~r~~q~g~~~~l~v~~~~--~kG~gv~a~~~I~~g~fv~EY~Gev~~~~~~~~~~~~~~~~~~~~~~~~~~~vIda~~- 306 (322)
+-..+++++-..|+|.... .+||||.|.++|++|+||+||+||++...+. .++.+++.+. ..+ ...++|||+.
T Consensus 19 ~~~~~~~~lp~~l~l~~S~i~~~G~GVfA~~~I~kG~~~gey~Ge~i~~~e~--~~~~Y~f~i~-~~~-~~~~~IDa~~~ 94 (149)
T 2qpw_A 19 VPEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVGDKKKRSQV--KNNVYMWEVY-YPN-LGWMCIDATDP 94 (149)
T ss_dssp SCHHHHHTCCTTEEEEECSSCTTSEEEEESSCBCTTCEECCCCCEEECGGGC--CCSSSEEEEE-ETT-TEEEEEECSSG
T ss_pred hhHHHHhCCCCCeEEEEcCCCCCceEEEECCccCCCCEEEEEeCEEcCHHHh--ccCceEEEEe-cCC-CeeEEEeCCCC
Confidence 3344667888999998874 6799999999999999999999999764433 2344444443 211 1246899998
Q ss_pred -CCCeeeeccC
Q 020737 307 -RGNIARFING 316 (322)
Q Consensus 307 -~GNiaRFiN~ 316 (322)
.||++||||-
T Consensus 95 ~~gn~~RfINh 105 (149)
T 2qpw_A 95 EKGNWLRYVNW 105 (149)
T ss_dssp GGSCGGGGCEE
T ss_pred CCCcceeeeec
Confidence 9999999984
No 21
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=99.43 E-value=4.6e-14 Score=104.61 Aligned_cols=48 Identities=40% Similarity=1.113 Sum_probs=44.9
Q ss_pred cccccccccCCCCceeecccCCCccccccCCCCCCCCCC-CccCccccc
Q 020737 61 GCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIG-TWLCPKCSG 108 (322)
Q Consensus 61 ~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g-~W~C~~C~~ 108 (322)
.|.+|++.++.+.||+||.|+++||++||+|||..+|+| +|+|+.|..
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccC
Confidence 577889887889999999999999999999999999999 999999985
No 22
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.42 E-value=7.4e-14 Score=105.30 Aligned_cols=49 Identities=37% Similarity=1.005 Sum_probs=46.1
Q ss_pred ccccccccccCCCCceeecccCCCccccccCCCCCCCCCC-CccCccccc
Q 020737 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIG-TWLCPKCSG 108 (322)
Q Consensus 60 ~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g-~W~C~~C~~ 108 (322)
..|.+|+..++.+.||+||.|+++||++||+|||..+|+| +|+|+.|..
T Consensus 27 c~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 27 CSCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 4799999988889999999999999999999999999999 999999974
No 23
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=99.40 E-value=4.6e-14 Score=103.27 Aligned_cols=55 Identities=27% Similarity=0.694 Sum_probs=47.5
Q ss_pred ccccccccccccc--CCCCceeecccCCCccccccCCCCCC--C-CCCCccCcccccCCc
Q 020737 57 YGDVGCEQCGSGE--RAEELLLCDKCDKGFHMKCLRPIVVR--V-PIGTWLCPKCSGQRR 111 (322)
Q Consensus 57 ~~~~~C~~C~~~~--~~~~ll~Cd~C~~~~H~~Cl~Ppl~~--~-p~g~W~C~~C~~~~~ 111 (322)
.++..|.+|+.++ +.+.||+||.|+++||+.|++|++.. + |+|+|+|+.|.....
T Consensus 4 ~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~~ 63 (66)
T 2yt5_A 4 GSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATT 63 (66)
T ss_dssp CCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTTS
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCccc
Confidence 3468899999874 45899999999999999999999887 4 899999999987543
No 24
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=99.39 E-value=1e-13 Score=103.98 Aligned_cols=57 Identities=23% Similarity=0.614 Sum_probs=49.5
Q ss_pred cccccccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 53 ERGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 53 ~~~~~~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
++++.+..+|.+|++.++.+.||+||.|+.|||+.|+++++..+|.++|+|+.|...
T Consensus 12 ~~~~~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~ 68 (75)
T 2k16_A 12 DEWGNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANK 68 (75)
T ss_dssp CSSSCEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHH
T ss_pred cccCCCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCc
Confidence 334455788999999887778999999999999999999988888899999999863
No 25
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.38 E-value=7.3e-14 Score=108.10 Aligned_cols=52 Identities=27% Similarity=0.725 Sum_probs=46.6
Q ss_pred ccccccccccccC--CCCceeecccCCCccccccCCCCCC----CCCCCccCcccccC
Q 020737 58 GDVGCEQCGSGER--AEELLLCDKCDKGFHMKCLRPIVVR----VPIGTWLCPKCSGQ 109 (322)
Q Consensus 58 ~~~~C~~C~~~~~--~~~ll~Cd~C~~~~H~~Cl~Ppl~~----~p~g~W~C~~C~~~ 109 (322)
++.+|.+|+.+++ .+.||+||.|+++||++|++|||.. +|+|+|+|+.|...
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~ 72 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQ 72 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHH
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccch
Confidence 4678999999865 4789999999999999999999985 89999999999864
No 26
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=99.37 E-value=1.7e-13 Score=122.09 Aligned_cols=55 Identities=35% Similarity=0.878 Sum_probs=48.7
Q ss_pred ccccccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccCCc
Q 020737 54 RGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRR 111 (322)
Q Consensus 54 ~~~~~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~~~ 111 (322)
+++.++.+|.+|+++ |.||+||+|+++||+.|++|++..+|.|+|+|+.|.....
T Consensus 2 ~~d~~~~~C~~C~~~---g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 56 (207)
T 3u5n_A 2 DDDPNEDWCAVCQNG---GDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGK 56 (207)
T ss_dssp -CCSSCSSBTTTCCC---EEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCCCCCCCCCCCCCC---CceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCccc
Confidence 345567889999987 7899999999999999999999999999999999997654
No 27
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=99.36 E-value=1e-13 Score=102.96 Aligned_cols=52 Identities=33% Similarity=0.781 Sum_probs=45.6
Q ss_pred cccccccccccccc--CCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 56 DYGDVGCEQCGSGE--RAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 56 ~~~~~~C~~C~~~~--~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
..++..|.+|++++ +.+.||+||.|+++||++|++|+ .+|+|+|||+.|...
T Consensus 13 ~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~--~vP~g~W~C~~C~~~ 66 (71)
T 2ku3_A 13 IDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVP--YIPEGQWLCRHCLQS 66 (71)
T ss_dssp CCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCS--SCCSSCCCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCC--cCCCCCcCCccCcCc
Confidence 44578899999875 67899999999999999999987 489999999999863
No 28
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=99.36 E-value=1.9e-13 Score=102.95 Aligned_cols=49 Identities=39% Similarity=1.091 Sum_probs=45.0
Q ss_pred ccccccccccCCCCceeecccCCCccccccCCCCCCCCCCC-ccCccccc
Q 020737 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGT-WLCPKCSG 108 (322)
Q Consensus 60 ~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~-W~C~~C~~ 108 (322)
-.|.+|++.++.+.||+||.|+++||++|++|||..+|+|+ |+|+.|+.
T Consensus 27 C~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 27 CACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp TSBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred CcCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 36888998888899999999999999999999999999998 99999975
No 29
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=99.36 E-value=9.2e-14 Score=107.49 Aligned_cols=54 Identities=33% Similarity=0.793 Sum_probs=46.3
Q ss_pred ccccccccccccc--CCCCceeecccCCCccccccCCCCCCCCCCCccCcccccCCcc
Q 020737 57 YGDVGCEQCGSGE--RAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRRV 112 (322)
Q Consensus 57 ~~~~~C~~C~~~~--~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~~~~ 112 (322)
.++..|.+|+.+. +.+.||+||.|+.+||+.|++|++ +|+|+|||+.|......
T Consensus 23 ~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~--vP~g~W~C~~C~~~~~~ 78 (88)
T 2l43_A 23 DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCLQSRAR 78 (88)
T ss_dssp CCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSS--CCSSCCCCHHHHHHTTS
T ss_pred CCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCc--cCCCceECccccCccch
Confidence 3468899999875 567999999999999999999874 89999999999875543
No 30
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=99.32 E-value=7e-13 Score=115.94 Aligned_cols=51 Identities=37% Similarity=0.942 Sum_probs=46.8
Q ss_pred ccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccCCc
Q 020737 58 GDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRR 111 (322)
Q Consensus 58 ~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~~~ 111 (322)
++.+|.+|+++ |.||+||.|+++||+.|++|++..+|.|+|+|+.|.....
T Consensus 3 ~~~~C~~C~~~---g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~~ 53 (184)
T 3o36_A 3 NEDWCAVCQNG---GELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLSK 53 (184)
T ss_dssp SCSSCTTTCCC---SSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCCccccCCCC---CeeeecCCCCcccCccccCCCCCCCCCCCEECccccCccc
Confidence 46789999987 8899999999999999999999999999999999997543
No 31
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.29 E-value=1.6e-12 Score=100.87 Aligned_cols=51 Identities=31% Similarity=0.837 Sum_probs=43.4
Q ss_pred cccccccccccccCCCCceeecc--cC-CCccccccCCCCCCCCCCCccCcccccCCc
Q 020737 57 YGDVGCEQCGSGERAEELLLCDK--CD-KGFHMKCLRPIVVRVPIGTWLCPKCSGQRR 111 (322)
Q Consensus 57 ~~~~~C~~C~~~~~~~~ll~Cd~--C~-~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~~~ 111 (322)
.+..+| +|++... +.||+||. |+ .|||+.|++ |...|.+.||||.|.....
T Consensus 34 ~e~~yC-iC~~~~~-g~MI~CD~~dC~~~WfH~~CVg--l~~~p~g~W~Cp~C~~~~~ 87 (91)
T 1weu_A 34 NEPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQESG 87 (91)
T ss_dssp CCCBCS-TTCCBCC-SCCCCCSCSSCSCCCCCSTTTT--CSSCCCSSCCCTTTCCCCS
T ss_pred CCCcEE-ECCCCCC-CCEeEecCCCCCCCCEecccCC--cCcCCCCCEECcCccCcCC
Confidence 446788 9998754 78999999 77 699999999 8889999999999987543
No 32
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=99.28 E-value=2.4e-12 Score=95.49 Aligned_cols=50 Identities=32% Similarity=0.860 Sum_probs=43.0
Q ss_pred cccccccccccccCCCCceeecc--cC-CCccccccCCCCCCCCCCCccCcccccCC
Q 020737 57 YGDVGCEQCGSGERAEELLLCDK--CD-KGFHMKCLRPIVVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 57 ~~~~~C~~C~~~~~~~~ll~Cd~--C~-~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~~ 110 (322)
.+..+| +|++... +.||+||. |+ .|||+.|++ |..+|.|.||||.|....
T Consensus 14 ~~~~~C-~C~~~~~-g~MI~CD~~~C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~~ 66 (71)
T 1wen_A 14 NEPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQES 66 (71)
T ss_dssp TSCCCS-TTCCCSC-SSEECCSCSSCSCCCEETTTTT--CSSCCSSCCCCTTTSSCS
T ss_pred CCCCEE-ECCCCCC-CCEeEeeCCCCCCccEecccCC--cCcCCCCCEECCCCCccc
Confidence 446788 8998654 78999999 87 699999999 889999999999998754
No 33
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=99.26 E-value=1.5e-12 Score=116.55 Aligned_cols=50 Identities=38% Similarity=1.050 Sum_probs=42.4
Q ss_pred cccccccccccCCCCceeecccCCCccccccCCCCCCCCCC-CccCccccc
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIG-TWLCPKCSG 108 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g-~W~C~~C~~ 108 (322)
+..|.+|+..++.+.||+||.|+++||+.|++|||..+|+| +|+|+.|..
T Consensus 174 ~c~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 174 VCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp TTSCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CCCCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 45799999988889999999999999999999999999999 999999975
No 34
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=99.25 E-value=3.9e-12 Score=117.16 Aligned_cols=70 Identities=13% Similarity=0.019 Sum_probs=51.9
Q ss_pred CCeEEEEeCC--CceeeeecccCCCCceeEEeeeeehhhhhhhc---cCCCceeeeeccCCCCCcEEEcCC--------C
Q 020737 240 PPLVVVYDSC--EGFTVEADGQIKDMTFIAEYIGDVDFIRNREH---DDCDSMMTLLLATDPSKSLVICPD--------K 306 (322)
Q Consensus 240 ~~l~v~~~~~--kG~gv~a~~~I~~g~fv~EY~Gev~~~~~~~~---~~~~~~~~~~~~~~~~~~~vIda~--------~ 306 (322)
..|+|..... +||||+|.++|++|+|||||+|||+...+.+. ....+.+.+ ...++|||+ .
T Consensus 109 ~~~~v~~S~i~~kG~GvfA~~~I~~G~~I~eY~Gevi~~~e~~~R~~~~~~~~f~l------~~~~~IDa~~~~~~~~~~ 182 (261)
T 2f69_A 109 ERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALNGNTLSL------DEETVIDVPEPYNHVSKY 182 (261)
T ss_dssp TTEEEEECSSTTCCEEEEESSCBCTTCEEEEECCEEECHHHHHTSCGGGCSSCEEC------SSSCEEECCTTTTSTTTC
T ss_pred ceEEEEecCCCCCceEEEECcccCCCCEEEEEeeEEeCHHHHHHHhhhhccceeee------cCCeEEEccccccccccc
Confidence 4678887764 59999999999999999999999965444322 122232221 245899995 4
Q ss_pred CCCeeeecc
Q 020737 307 RGNIARFIN 315 (322)
Q Consensus 307 ~GNiaRFiN 315 (322)
+||+|||||
T Consensus 183 ~Gn~aRfiN 191 (261)
T 2f69_A 183 CASLGHKAN 191 (261)
T ss_dssp CSCCGGGCE
T ss_pred cccceeeEe
Confidence 999999998
No 35
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=99.25 E-value=1.5e-12 Score=105.45 Aligned_cols=50 Identities=44% Similarity=1.076 Sum_probs=46.1
Q ss_pred ccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 60 ~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
..|.+|+..++.+.||+||.|+++||++|++|||..+|+|+|||+.|...
T Consensus 59 ~~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~ 108 (114)
T 2kwj_A 59 KSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWEL 108 (114)
T ss_dssp CCCTTTTCCTTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHHH
T ss_pred CccCcccccCCCCceEEcCCCCccccccccCCCccCCCCCCeECccccch
Confidence 36888998888899999999999999999999999999999999999753
No 36
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=99.24 E-value=4.4e-12 Score=99.99 Aligned_cols=51 Identities=27% Similarity=0.637 Sum_probs=44.6
Q ss_pred cccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 57 YGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 57 ~~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
.+...| +|+...+.+.||+||.|+.|||+.|++|++..+|+ .|+|+.|...
T Consensus 26 ~d~vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~-~w~C~~C~~~ 76 (98)
T 2lv9_A 26 TDVTRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPD-TYLCERCQPR 76 (98)
T ss_dssp CCBCCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCS-SBCCTTTSSS
T ss_pred CCCEEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCC-CEECCCCcCC
Confidence 335668 89998888999999999999999999999888875 8999999864
No 37
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=99.22 E-value=2.1e-12 Score=92.74 Aligned_cols=49 Identities=33% Similarity=0.879 Sum_probs=41.1
Q ss_pred cccccccccccccCCCCceeecc--cC-CCccccccCCCCCCCCCCCccCcccccC
Q 020737 57 YGDVGCEQCGSGERAEELLLCDK--CD-KGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 57 ~~~~~C~~C~~~~~~~~ll~Cd~--C~-~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
.+..+| +|++... +.||+||. |+ .|||+.|++ |..+|.|.|+||.|..+
T Consensus 8 ~e~~~C-~C~~~~~-g~mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~~ 59 (60)
T 2vnf_A 8 NEPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQE 59 (60)
T ss_dssp -CCEET-TTTEECC-SEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC-
T ss_pred CCCCEE-ECCCcCC-CCEEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCccCc
Confidence 346778 9999754 78999999 66 799999999 88999999999999753
No 38
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=99.22 E-value=2.3e-12 Score=92.17 Aligned_cols=49 Identities=31% Similarity=0.853 Sum_probs=41.7
Q ss_pred cccccccccccccCCCCceeecc--cC-CCccccccCCCCCCCCCCCccCcccccC
Q 020737 57 YGDVGCEQCGSGERAEELLLCDK--CD-KGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 57 ~~~~~C~~C~~~~~~~~ll~Cd~--C~-~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
.+..+| +|++.. .+.||+||. |+ .|||+.|++ |+..|.|+|+||.|..+
T Consensus 7 ~e~~yC-~C~~~~-~g~mi~CD~~~C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~~~ 58 (59)
T 3c6w_A 7 NEPTYC-LCHQVS-YGEMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQE 58 (59)
T ss_dssp -CCEET-TTTEEC-CSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHCC
T ss_pred CCCcEE-ECCCCC-CCCeeEeeCCCCCCCCEecccCC--cccCCCCCEECcCccCc
Confidence 346778 999875 478999999 77 699999999 88999999999999763
No 39
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=99.21 E-value=6.1e-12 Score=101.51 Aligned_cols=49 Identities=41% Similarity=1.127 Sum_probs=44.1
Q ss_pred ccccccccc-cCCCCceeecccCCCccccccCCCCCCCCCCCccCccccc
Q 020737 60 VGCEQCGSG-ERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSG 108 (322)
Q Consensus 60 ~~C~~C~~~-~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~ 108 (322)
..|.+|+.. .+.+.||+||.|+++||++|++|+|..+|+|+|+|+.|+.
T Consensus 62 ~~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 62 KTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CCBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred CccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 468888874 4667999999999999999999999999999999999985
No 40
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=99.20 E-value=5.8e-12 Score=110.67 Aligned_cols=49 Identities=29% Similarity=0.767 Sum_probs=45.3
Q ss_pred cccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccCC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~~ 110 (322)
+..|.+|+.+ |.|++||.|+++||+.|+.|++..+|.|+|+|+.|....
T Consensus 2 ~~~C~~C~~~---g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~ 50 (189)
T 2ro1_A 2 ATICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 50 (189)
T ss_dssp CCCBTTTCCC---SSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSC
T ss_pred CCcCccCCCC---CceeECCCCCchhccccCCCCcccCCCCCCCCcCccCCC
Confidence 4679999987 789999999999999999999999999999999998753
No 41
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=99.20 E-value=2.6e-12 Score=104.50 Aligned_cols=68 Identities=12% Similarity=0.074 Sum_probs=54.3
Q ss_pred CCCeEEEEeCCCceeeeecccCCCCceeEEeeeeehhhhhhhccCCCceeeeeccCCCCCcEEEcCCCCCCeeeeccC
Q 020737 239 CPPLVVVYDSCEGFTVEADGQIKDMTFIAEYIGDVDFIRNREHDDCDSMMTLLLATDPSKSLVICPDKRGNIARFING 316 (322)
Q Consensus 239 ~~~l~v~~~~~kG~gv~a~~~I~~g~fv~EY~Gev~~~~~~~~~~~~~~~~~~~~~~~~~~~vIda~~~GNiaRFiN~ 316 (322)
.++|+|+.+..+||||+|.++|++|+||+||+|||....+.+....++++.+ .+ |+...||++||||-
T Consensus 3 ~~~~~v~~s~~~G~GvfA~~~I~~G~~I~ey~g~vi~~~e~~~~~~~y~f~~---~~-------d~~~~~~~~~~~NH 70 (119)
T 1n3j_A 3 NDRVIVKKSPLGGYGVFARKSFEKGELVEECLCIVRHNDDWGTALEDYLFSR---KN-------MSAMALGFGAIFNH 70 (119)
T ss_dssp CSSEEEECSCSSCCEEEECCCBCSCEEECCCCCEEECSHHHHHHSCSEEEEE---TT-------EEEEESSSHHHHHS
T ss_pred CCCEEEEECCCceeEEEECCcCCCCCEEEEeeEEEECHHHHhhccCCeEEEe---CC-------ccccccCceeeecc
Confidence 5789999999999999999999999999999999976555444334443322 11 78899999999984
No 42
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=99.20 E-value=3.6e-12 Score=92.11 Aligned_cols=49 Identities=35% Similarity=0.900 Sum_probs=41.2
Q ss_pred cccccccccccccCCCCceeecc--cC-CCccccccCCCCCCCCCCCccCcccccC
Q 020737 57 YGDVGCEQCGSGERAEELLLCDK--CD-KGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 57 ~~~~~C~~C~~~~~~~~ll~Cd~--C~-~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
.+..+| +|++.. .+.||+||. |+ .|||+.|++ |+..|.|.|+||.|..+
T Consensus 9 ~e~~yC-~C~~~~-~g~MI~CD~c~C~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~~ 60 (62)
T 2g6q_A 9 NEPTYC-LCNQVS-YGEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRGD 60 (62)
T ss_dssp -CCEET-TTTEEC-CSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHTC
T ss_pred CCCcEE-ECCCCC-CCCeeeeeCCCCCcccEecccCC--cCcCCCCCEECcCcccC
Confidence 346778 999964 478999999 55 899999999 78889999999999864
No 43
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=99.18 E-value=1.3e-11 Score=115.25 Aligned_cols=71 Identities=11% Similarity=-0.004 Sum_probs=52.8
Q ss_pred CCCeEEEEeCCCc--eeeeecccCCCCceeEEeeeeehhhhhhhc---cCCCceeeeeccCCCCCcEEEcC--------C
Q 020737 239 CPPLVVVYDSCEG--FTVEADGQIKDMTFIAEYIGDVDFIRNREH---DDCDSMMTLLLATDPSKSLVICP--------D 305 (322)
Q Consensus 239 ~~~l~v~~~~~kG--~gv~a~~~I~~g~fv~EY~Gev~~~~~~~~---~~~~~~~~~~~~~~~~~~~vIda--------~ 305 (322)
.+.|+|......| |||+|.++|++|+|||||+|||+...+.+. ....+.+. | ...++||| +
T Consensus 162 ~~~~~v~~S~i~GkG~Gvfa~~~I~~G~~I~ey~Ge~i~~~~~~~r~~~~~~~~~~-l-----~~~~~iDa~~~~~~~~~ 235 (293)
T 1h3i_A 162 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALNGNTLS-L-----DEETVIDVPEPYNHVSK 235 (293)
T ss_dssp HTTEEEEECSSSSSSEEEEESSCBCTTCEEEEECCEEECHHHHHHSCGGGCTTEEE-C-----SSSCEEECCTTTTSTTT
T ss_pred ceeEEEeeeecCCCcceEEECCcCCCCCEEEEeccEEcCHHHHhHHhhhcccCEEe-c-----CCCEEEeCcccccccce
Confidence 3578888876655 999999999999999999999965444322 22233322 2 23589999 7
Q ss_pred CCCCeeeecc
Q 020737 306 KRGNIARFIN 315 (322)
Q Consensus 306 ~~GNiaRFiN 315 (322)
..||+|||||
T Consensus 236 ~~gn~ar~iN 245 (293)
T 1h3i_A 236 YCASLGHKAN 245 (293)
T ss_dssp CCSCCGGGSE
T ss_pred eeccceeeec
Confidence 7999999997
No 44
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=99.15 E-value=9.8e-12 Score=96.17 Aligned_cols=50 Identities=28% Similarity=0.723 Sum_probs=41.3
Q ss_pred cccccccccccccccCCCCceeecccC---CCccccccCCCCCCCCCCCccCcc-ccc
Q 020737 55 GDYGDVGCEQCGSGERAEELLLCDKCD---KGFHMKCLRPIVVRVPIGTWLCPK-CSG 108 (322)
Q Consensus 55 ~~~~~~~C~~C~~~~~~~~ll~Cd~C~---~~~H~~Cl~Ppl~~~p~g~W~C~~-C~~ 108 (322)
++++..+| +|++... +.||+||.|+ .|||+.||+ |...|.|.||||. |..
T Consensus 22 ~~~~~~yC-iC~~~~~-g~MI~CD~c~C~~eWfH~~CVg--l~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 22 NNQEEVYC-FCRNVSY-GPMVACDNPACPFEWFHYGCVG--LKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp --CCSCCS-TTTCCCS-SSEECCCSSSCSCSCEETTTSS--CSSCTTSCCCSSHHHHH
T ss_pred CCCCCcEE-EeCCCCC-CCEEEecCCCCccccCcCccCC--CCcCCCCCccCChhhcc
Confidence 34456788 9998644 6899999966 899999999 8889999999999 974
No 45
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=99.15 E-value=1.3e-11 Score=98.55 Aligned_cols=49 Identities=39% Similarity=0.956 Sum_probs=43.8
Q ss_pred ccccccccccccccCCCCceeec--ccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 56 DYGDVGCEQCGSGERAEELLLCD--KCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 56 ~~~~~~C~~C~~~~~~~~ll~Cd--~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
..++.+|.+|+++ |+||+|| .|++|||+.|++ |..+|+|+|+||.|...
T Consensus 12 ~~~~~~C~~C~~~---G~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C~ 62 (107)
T 4gne_A 12 QMHEDYCFQCGDG---GELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQCD 62 (107)
T ss_dssp CSSCSSCTTTCCC---SEEEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBCT
T ss_pred CCCCCCCCcCCCC---CcEeEECCCCCCcccccccCc--CCcCCCCCEECCCCCCC
Confidence 4457889999976 8999999 899999999999 89999999999998753
No 46
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=99.14 E-value=1.3e-11 Score=99.29 Aligned_cols=51 Identities=35% Similarity=0.925 Sum_probs=46.3
Q ss_pred ccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccCC
Q 020737 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 60 ~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~~ 110 (322)
..|.+|++..++..||.||.|+++||+.|++||+..+|+|+|+|+.|....
T Consensus 55 ~~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~c~ 105 (111)
T 2ysm_A 55 KVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRICI 105 (111)
T ss_dssp CCCTTTCCCSCCTTEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHHCCS
T ss_pred CcccccCccCCCCCeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCcCcC
Confidence 368889988777889999999999999999999999999999999997643
No 47
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=99.01 E-value=1.3e-10 Score=85.37 Aligned_cols=52 Identities=25% Similarity=0.596 Sum_probs=43.1
Q ss_pred ccccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 56 DYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 56 ~~~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
+.+..+| +|++..+.+.||.||.|..|||..|++.....+| +.|+|+.|...
T Consensus 16 ~~~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~-~~~~C~~C~~s 67 (68)
T 3o70_A 16 FQGLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCRDS 67 (68)
T ss_dssp TTTCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCC-SSCCCHHHHTC
T ss_pred CCCceEe-ECCCcCCCCCEEECCCCCccccccccCcCcccCC-CcEECCCCCCC
Confidence 3456788 9999887778999999999999999996654454 68999999753
No 48
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=98.98 E-value=5e-10 Score=96.61 Aligned_cols=80 Identities=14% Similarity=0.144 Sum_probs=50.7
Q ss_pred CCCeEEEEe--CCCceeeeecccCCCCceeEEeeeeehhhhhhhccCCCceeeeeccCCCCCcEEEcCCC--CCCeeeec
Q 020737 239 CPPLVVVYD--SCEGFTVEADGQIKDMTFIAEYIGDVDFIRNREHDDCDSMMTLLLATDPSKSLVICPDK--RGNIARFI 314 (322)
Q Consensus 239 ~~~l~v~~~--~~kG~gv~a~~~I~~g~fv~EY~Gev~~~~~~~~~~~~~~~~~~~~~~~~~~~vIda~~--~GNiaRFi 314 (322)
-+.|.|... ..+||||.|.++|++|++|+||+||++...+...+....+|..+...+....++||++. .||..|||
T Consensus 26 P~~l~l~~S~i~~~G~GVfA~~~IpkGt~fGpY~Ge~i~~~ea~~~~~~~y~w~i~~~~G~~~~~IDa~~e~~~NWmR~V 105 (170)
T 3ep0_A 26 PAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDICKNNNLMWEVFNEDGTVRYFIDASQEDHRSWMTYI 105 (170)
T ss_dssp CTTEEEEECSSSSCSEEEEESSCBCTTCEEEEECCEEECC----------CEEEEECTTSSEEEEEECC------GGGGC
T ss_pred CCCeEEEEcCCCCCceEEEECcccCCCCEEEecCceecCHHHhccccCCceEEEEecCCCcEEEEEECCCCCCcceeeeE
Confidence 456777664 45799999999999999999999999776554333334444444433333457999998 89999999
Q ss_pred cCCC
Q 020737 315 NGIN 318 (322)
Q Consensus 315 N~~~ 318 (322)
|--.
T Consensus 106 n~A~ 109 (170)
T 3ep0_A 106 KCAR 109 (170)
T ss_dssp EECS
T ss_pred EecC
Confidence 9543
No 49
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.97 E-value=1.1e-10 Score=86.21 Aligned_cols=48 Identities=31% Similarity=0.780 Sum_probs=40.7
Q ss_pred cccccccccccccCCCCceeecccC---CCccccccCCCCCCCCCCCccCccccc
Q 020737 57 YGDVGCEQCGSGERAEELLLCDKCD---KGFHMKCLRPIVVRVPIGTWLCPKCSG 108 (322)
Q Consensus 57 ~~~~~C~~C~~~~~~~~ll~Cd~C~---~~~H~~Cl~Ppl~~~p~g~W~C~~C~~ 108 (322)
.+..+| +|++.. .+.||.||.|+ .|||+.|++ |...|.+.|+||.|..
T Consensus 4 ~~~~yC-~C~~~~-~g~MI~CD~cdC~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~ 54 (70)
T 1x4i_A 4 GSSGYC-ICNQVS-YGEMVGCDNQDCPIEWFHYGCVG--LTEAPKGKWYCPQCTA 54 (70)
T ss_dssp SCCCCS-TTSCCC-CSSEECCSCTTCSCCCEEHHHHT--CSSCCSSCCCCHHHHH
T ss_pred CCCeEE-EcCCCC-CCCEeEeCCCCCCccCCcccccc--cCcCCCCCEECCCCCc
Confidence 345778 799874 56999999975 799999999 7788999999999986
No 50
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.96 E-value=1.7e-10 Score=85.74 Aligned_cols=56 Identities=25% Similarity=0.555 Sum_probs=43.5
Q ss_pred cccccccccccccccCCC-CceeecccCCCccccccCCCCCCCCCCCccCcccccCCc
Q 020737 55 GDYGDVGCEQCGSGERAE-ELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQRR 111 (322)
Q Consensus 55 ~~~~~~~C~~C~~~~~~~-~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~~~ 111 (322)
++.+..+| +|+...+.+ .||+||.|..|||..|++........+.|+|+.|.....
T Consensus 12 ~~~~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~~~ 68 (72)
T 1wee_A 12 VDNWKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELSG 68 (72)
T ss_dssp SCSSEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHHCS
T ss_pred CCCcceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCCCC
Confidence 34456889 899986555 799999999999999999654333347899999987543
No 51
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.91 E-value=3.1e-10 Score=82.23 Aligned_cols=55 Identities=31% Similarity=0.664 Sum_probs=43.2
Q ss_pred ccccccccccccccC-CCCceeecccCCCccccccCCCCCCCC-CCCccCcccccCC
Q 020737 56 DYGDVGCEQCGSGER-AEELLLCDKCDKGFHMKCLRPIVVRVP-IGTWLCPKCSGQR 110 (322)
Q Consensus 56 ~~~~~~C~~C~~~~~-~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p-~g~W~C~~C~~~~ 110 (322)
+.+..+|.+|++..+ .+.||.||.|+.|||..|++....... .+.|+|+.|..+.
T Consensus 3 ~~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~ 59 (64)
T 1we9_A 3 SGSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKS 59 (64)
T ss_dssp CSSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTT
T ss_pred CCCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCcC
Confidence 345688999999864 578999999999999999995433222 3689999998753
No 52
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=98.87 E-value=2.8e-10 Score=95.12 Aligned_cols=52 Identities=31% Similarity=0.668 Sum_probs=45.9
Q ss_pred cccccccccccccccCCCCceeecccCCCccccccCCCCCC-------CCCCCccCcccccC
Q 020737 55 GDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVR-------VPIGTWLCPKCSGQ 109 (322)
Q Consensus 55 ~~~~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~-------~p~g~W~C~~C~~~ 109 (322)
+|..+.+|.+|+.+ |+|++||.|++.||..|+.|++.. .|.|+|.|+.|...
T Consensus 59 ~Dg~~d~C~vC~~G---G~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 59 SDGMDEQCRWCAEG---GNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp TTSCBCSCSSSCCC---SSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred CCCCCCeecccCCC---CcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 34457899999998 999999999999999999999863 58999999999863
No 53
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=98.86 E-value=6.1e-10 Score=77.47 Aligned_cols=49 Identities=24% Similarity=0.629 Sum_probs=40.4
Q ss_pred ccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCccccc
Q 020737 58 GDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSG 108 (322)
Q Consensus 58 ~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~ 108 (322)
+..+| +|++..+.+.||.||.|..|||..|++.....+| +.|+|+.|..
T Consensus 3 d~~~C-~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~-~~~~C~~C~~ 51 (52)
T 3o7a_A 3 DLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCRD 51 (52)
T ss_dssp TCBCS-TTCCBCTTCCEEECTTTCCEEETTTTTCCGGGCC-SSCCCHHHHT
T ss_pred cCeEE-EeCCcCCCCCEEEcCCCCccccccccCCCcccCC-CcEECcCCCC
Confidence 34667 8999877779999999999999999996544344 6899999974
No 54
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.85 E-value=6.8e-10 Score=83.73 Aligned_cols=52 Identities=21% Similarity=0.577 Sum_probs=42.4
Q ss_pred cccccccccccccCCCCceeec--ccCCCccccccCCCCCCCC-------CCCccCcccccCCc
Q 020737 57 YGDVGCEQCGSGERAEELLLCD--KCDKGFHMKCLRPIVVRVP-------IGTWLCPKCSGQRR 111 (322)
Q Consensus 57 ~~~~~C~~C~~~~~~~~ll~Cd--~C~~~~H~~Cl~Ppl~~~p-------~g~W~C~~C~~~~~ 111 (322)
.+..+| +|+..++.+.||.|| .|..|||..|++ |...+ ...|+|+.|.....
T Consensus 14 ~~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVg--i~~~~~~~~~~~~~~~~C~~C~~~~~ 74 (78)
T 1wew_A 14 EIKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVI--LPDKPMDGNPPLPESFYCEICRLTSG 74 (78)
T ss_dssp CCCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHS--CCCTTTCSCSCSCSSCCCHHHHHCCS
T ss_pred CCCEEe-ECCCcCCCCCEEEECCccCCccccCEEEc--cccccccccccCCCCEECCCCCcccC
Confidence 346788 899988889999999 999999999999 44433 25899999987543
No 55
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.84 E-value=2.5e-10 Score=85.68 Aligned_cols=56 Identities=23% Similarity=0.545 Sum_probs=43.1
Q ss_pred ccccccccccccccCCCCceeecccCCCccccccCCCCCCC-----CCCCccCcccccCCcc
Q 020737 56 DYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRV-----PIGTWLCPKCSGQRRV 112 (322)
Q Consensus 56 ~~~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~-----p~g~W~C~~C~~~~~~ 112 (322)
+.+..+| +|++..+.+.||+||.|+.|||..|++...... +...|+|+.|.....+
T Consensus 13 d~~~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~~p 73 (76)
T 1wem_A 13 DPNALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILSGP 73 (76)
T ss_dssp CTTCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHSCS
T ss_pred CCCCCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCccCc
Confidence 3346788 999988778999999999999999999432210 2468999999875543
No 56
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.83 E-value=2e-09 Score=86.41 Aligned_cols=52 Identities=25% Similarity=0.692 Sum_probs=45.8
Q ss_pred ccccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccc
Q 020737 56 DYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107 (322)
Q Consensus 56 ~~~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~ 107 (322)
+.++.+|.+|+.+.+...||.|+.|++.||+.|+++++..++.+.|+|+.|.
T Consensus 4 ~~~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 4 GSSGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp CCCCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCCCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCC
Confidence 3457899999998666677999999999999999999888888999999996
No 57
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=98.83 E-value=1.6e-09 Score=99.98 Aligned_cols=72 Identities=17% Similarity=0.136 Sum_probs=47.0
Q ss_pred CCCeEEEEe-----CCCceeeeecccCCCCceeEEeeeeehhhhhhh---c-cCCCceeeeeccCCCCCcEEEcCCCCCC
Q 020737 239 CPPLVVVYD-----SCEGFTVEADGQIKDMTFIAEYIGDVDFIRNRE---H-DDCDSMMTLLLATDPSKSLVICPDKRGN 309 (322)
Q Consensus 239 ~~~l~v~~~-----~~kG~gv~a~~~I~~g~fv~EY~Gev~~~~~~~---~-~~~~~~~~~~~~~~~~~~~vIda~~~GN 309 (322)
..+++|..+ +.+||||+|.++|++|+||+||+|||..+...+ + ........++... ..++++.+||
T Consensus 130 ~~gfeV~~~~ry~~e~~G~GlfA~~~I~kGe~I~EY~Geii~~~e~ee~~~~~~~~~dF~i~~s~-----~~~~a~~~g~ 204 (273)
T 3s8p_A 130 DSGFEILPCNRYSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEENMLLRHGENDFSVMYST-----RKNCAQLWLG 204 (273)
T ss_dssp GGCEEEEEECCCTTCSSEEEEEESSCBCTTCEEEEEEEEEEEECHHHHHHHCCTTTSCTTEEEET-----TTTEEEEEES
T ss_pred CCCceEEeccceeecCCCceEEECCccCCCCEEEEEEEEEccccHHHHHHHhhhcccccceeccc-----cccccceecc
Confidence 445677554 459999999999999999999999995433321 1 1111111111111 1245788999
Q ss_pred eeeecc
Q 020737 310 IARFIN 315 (322)
Q Consensus 310 iaRFiN 315 (322)
+|||||
T Consensus 205 ~arfiN 210 (273)
T 3s8p_A 205 PAAFIN 210 (273)
T ss_dssp GGGGCE
T ss_pred hHHhhC
Confidence 999998
No 58
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=98.79 E-value=1.8e-09 Score=79.26 Aligned_cols=51 Identities=20% Similarity=0.444 Sum_probs=38.9
Q ss_pred ccccccccccccCCCCceeecc--cCCCccccccCCCCCCC----CCCCccCcccccC
Q 020737 58 GDVGCEQCGSGERAEELLLCDK--CDKGFHMKCLRPIVVRV----PIGTWLCPKCSGQ 109 (322)
Q Consensus 58 ~~~~C~~C~~~~~~~~ll~Cd~--C~~~~H~~Cl~Ppl~~~----p~g~W~C~~C~~~ 109 (322)
+..+| +|+..++.+.||.||. |..|||..|++...... ....|+|+.|+..
T Consensus 9 ~~v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~ 65 (68)
T 2rsd_A 9 AKVRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRLS 65 (68)
T ss_dssp CEECC-TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHHH
T ss_pred CCEEe-ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccCc
Confidence 35778 8999888899999995 99999999998432111 1136999999753
No 59
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=98.78 E-value=5.8e-10 Score=81.17 Aligned_cols=50 Identities=24% Similarity=0.610 Sum_probs=40.0
Q ss_pred ccccccccccccc-CCCCceeec-ccCCCccccccCCCCCC--------CCCCCccCccccc
Q 020737 57 YGDVGCEQCGSGE-RAEELLLCD-KCDKGFHMKCLRPIVVR--------VPIGTWLCPKCSG 108 (322)
Q Consensus 57 ~~~~~C~~C~~~~-~~~~ll~Cd-~C~~~~H~~Cl~Ppl~~--------~p~g~W~C~~C~~ 108 (322)
.....|.+|+++. +...||.|| .|..|||..|++ |+. .|.+.|+|+.|..
T Consensus 6 ~~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvg--lt~~~~~~l~~e~~~~w~C~~C~~ 65 (65)
T 2vpb_A 6 DPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTG--MTETAYGLLTAEASAVWGCDTCMA 65 (65)
T ss_dssp ---CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHT--CCHHHHHHHHHCTTEEECCHHHHC
T ss_pred CCcCcCccCCCccCCCCCeEecccCccccCchhccC--CCHHHHHHhhccCCCcEECcCccC
Confidence 3457899999985 456899999 999999999999 544 4777999999963
No 60
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.73 E-value=1.6e-09 Score=81.82 Aligned_cols=54 Identities=22% Similarity=0.456 Sum_probs=41.9
Q ss_pred cccccccccccccC-CCCceeecccCCCccccccCCCCCCC-CCCCccCcccccCCc
Q 020737 57 YGDVGCEQCGSGER-AEELLLCDKCDKGFHMKCLRPIVVRV-PIGTWLCPKCSGQRR 111 (322)
Q Consensus 57 ~~~~~C~~C~~~~~-~~~ll~Cd~C~~~~H~~Cl~Ppl~~~-p~g~W~C~~C~~~~~ 111 (322)
.+..+| +|++..+ .+.||.||.|..|||..|++...... ..+.|+|+.|.....
T Consensus 10 ~~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~~ 65 (79)
T 1wep_A 10 LVPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVFG 65 (79)
T ss_dssp CCCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTSC
T ss_pred CCccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCcccccC
Confidence 345778 9999864 68999999999999999999432222 236899999997554
No 61
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=98.72 E-value=7.3e-09 Score=91.19 Aligned_cols=81 Identities=16% Similarity=0.091 Sum_probs=56.4
Q ss_pred CCCCeEEEEe--CCCceeeeecccCCCCceeEEeeeeehhhhhhhccCCCceeeeeccCCCCCcEEEcCCC--CCCeeee
Q 020737 238 ECPPLVVVYD--SCEGFTVEADGQIKDMTFIAEYIGDVDFIRNREHDDCDSMMTLLLATDPSKSLVICPDK--RGNIARF 313 (322)
Q Consensus 238 ~~~~l~v~~~--~~kG~gv~a~~~I~~g~fv~EY~Gev~~~~~~~~~~~~~~~~~~~~~~~~~~~vIda~~--~GNiaRF 313 (322)
+-+.|.|... ...|+||.|.++|++|+++.||+||++...+...+.+..++..+... .....+|||+. .||..||
T Consensus 56 LP~~L~lr~S~i~~~G~GVfa~~~IpkGt~fGPY~Ge~~~~~e~~~~~~~~y~w~i~~~-g~~~~~IDas~e~~gNWmRf 134 (196)
T 3dal_A 56 LPRNLLFKYATNSEEVIGVMSKEYIPKGTRFGPLIGEIYTNDTVPKNANRKYFWRIYSR-GELHHFIDGFNEEKSNWMRY 134 (196)
T ss_dssp CCTTEEEEECTTSCCEEEEEESSCBCTTEEECCCCCEEECTTTCC---CCTTEEEEEET-TEEEEEEECCCTTSSCGGGG
T ss_pred CCCCeEEEECCCCCceeEEEEccccCCCCEEEeccceEcCHHHhhhccCCcceeeeccC-CCEEEEEECCCCCCCceEEe
Confidence 3556766655 44899999999999999999999999776554333333333333221 12347899987 8999999
Q ss_pred ccCCCC
Q 020737 314 INGINN 319 (322)
Q Consensus 314 iN~~~~ 319 (322)
||--.+
T Consensus 135 Vn~A~~ 140 (196)
T 3dal_A 135 VNPAHS 140 (196)
T ss_dssp CEECSS
T ss_pred EEecCC
Confidence 996543
No 62
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=98.70 E-value=2e-09 Score=80.49 Aligned_cols=54 Identities=24% Similarity=0.506 Sum_probs=41.4
Q ss_pred ccccccccccccccC-CCCceeecccCCCccccccCCCCCCCCC-CCccCcccccCC
Q 020737 56 DYGDVGCEQCGSGER-AEELLLCDKCDKGFHMKCLRPIVVRVPI-GTWLCPKCSGQR 110 (322)
Q Consensus 56 ~~~~~~C~~C~~~~~-~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~-g~W~C~~C~~~~ 110 (322)
+.+..+| +|+.+.+ .+.||.||.|..|||..|++......+. +.|+|+.|....
T Consensus 7 ~~~~~yC-iC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~ 62 (75)
T 3kqi_A 7 ATVPVYC-VCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTH 62 (75)
T ss_dssp CCCCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHHH
T ss_pred CCCeeEE-ECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcccC
Confidence 3446778 9999764 5799999999999999999944333332 579999998643
No 63
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=98.70 E-value=2.5e-09 Score=85.17 Aligned_cols=50 Identities=26% Similarity=0.692 Sum_probs=41.1
Q ss_pred ccccccccccc-CCCCceeec-ccCCCccccccCCCCCC--------CCCCCccCcccccCC
Q 020737 59 DVGCEQCGSGE-RAEELLLCD-KCDKGFHMKCLRPIVVR--------VPIGTWLCPKCSGQR 110 (322)
Q Consensus 59 ~~~C~~C~~~~-~~~~ll~Cd-~C~~~~H~~Cl~Ppl~~--------~p~g~W~C~~C~~~~ 110 (322)
...|.+|+++. +.+.||.|| .|+.|||..|++ |+. .|.+.|+||.|....
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVg--lt~~~~~~i~~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTG--MTESAYGLLTTEASAVWACDLCLKTK 62 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTT--CCHHHHHHHHHCTTEEECCHHHHHTT
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCC--cCHHHHHhhccCCCCCEECccccCcC
Confidence 35799999984 456899998 999999999999 443 466899999998754
No 64
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=98.63 E-value=2.4e-08 Score=84.52 Aligned_cols=80 Identities=14% Similarity=0.037 Sum_probs=50.9
Q ss_pred CCCCeEEEE-eCCCceeeeecccCCCCceeEEeeeeehhhhhhhc--cCCCceeeeeccCCCCCcEEEcCCC--CCCeee
Q 020737 238 ECPPLVVVY-DSCEGFTVEADGQIKDMTFIAEYIGDVDFIRNREH--DDCDSMMTLLLATDPSKSLVICPDK--RGNIAR 312 (322)
Q Consensus 238 ~~~~l~v~~-~~~kG~gv~a~~~I~~g~fv~EY~Gev~~~~~~~~--~~~~~~~~~~~~~~~~~~~vIda~~--~GNiaR 312 (322)
+-..|+|.. ....|+||.|.+.|++|+++.||+||+....+... +....++..+.. +.....+||++. .||..|
T Consensus 21 lP~~l~l~~S~~~~g~GVfa~~~Ip~G~~fGPy~Ge~~~~~e~~~~~~~~~~y~w~i~~-~~~~~~~iD~~~~~~~NWmR 99 (151)
T 3db5_A 21 LPKQLVLRQSIVGAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYH-NGVLEFCIITTDENECNWMM 99 (151)
T ss_dssp CCTTEEEEECC---CEEEEESSCBCTTCEECCCCCEEEC-----------CCSEEEEEE-TTEEEEEEECCCTTTSCGGG
T ss_pred CCCCeEEEEccCCCceEEEEecccCCCCEEEEeccEEeCHHHhhcccccCCCceEEEEe-CCCEEEEEECcCCCCCccee
Confidence 355677766 35689999999999999999999999976544321 222233333322 222346899998 699999
Q ss_pred eccCCC
Q 020737 313 FINGIN 318 (322)
Q Consensus 313 FiN~~~ 318 (322)
|||--.
T Consensus 100 ~Vn~A~ 105 (151)
T 3db5_A 100 FVRKAR 105 (151)
T ss_dssp GCEECS
T ss_pred EEEecC
Confidence 999654
No 65
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=98.60 E-value=2.4e-09 Score=87.96 Aligned_cols=53 Identities=28% Similarity=0.660 Sum_probs=44.8
Q ss_pred ccccccccccccccccCCCCceeecccCCCccccccCCCCC-----CC--CCCCccCcccccC
Q 020737 54 RGDYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVV-----RV--PIGTWLCPKCSGQ 109 (322)
Q Consensus 54 ~~~~~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~-----~~--p~g~W~C~~C~~~ 109 (322)
++|..+.+|.+|+.+ |++++||.|++.||..|+.|++. ++ |.+.|+|+.|...
T Consensus 52 d~Dg~~~~C~vC~dG---G~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 52 DSDGMDEQCRWCAEG---GNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp CTTSCBSSCTTTCCC---SEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred CCCCCCCcCeecCCC---CeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 334457889999998 99999999999999999998853 33 7899999999763
No 66
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=98.59 E-value=3.6e-09 Score=91.30 Aligned_cols=52 Identities=23% Similarity=0.652 Sum_probs=41.0
Q ss_pred cccccccccccccC-CCCceeecccCCCccccccCCCCCC-CCCCCccCcccccC
Q 020737 57 YGDVGCEQCGSGER-AEELLLCDKCDKGFHMKCLRPIVVR-VPIGTWLCPKCSGQ 109 (322)
Q Consensus 57 ~~~~~C~~C~~~~~-~~~ll~Cd~C~~~~H~~Cl~Ppl~~-~p~g~W~C~~C~~~ 109 (322)
.+..+| +|+++.+ .+.||+||.|+.|||..|++..... ...+.|+|+.|...
T Consensus 6 ~~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 6 DTKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp -CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHH
T ss_pred CCCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcch
Confidence 446889 9999754 6789999999999999999953222 23578999999864
No 67
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=98.58 E-value=5.5e-09 Score=72.61 Aligned_cols=47 Identities=21% Similarity=0.561 Sum_probs=35.9
Q ss_pred cccccccccC-CCCceeec-ccCCCccccccCCCCCCCCCCCccCcccc
Q 020737 61 GCEQCGSGER-AEELLLCD-KCDKGFHMKCLRPIVVRVPIGTWLCPKCS 107 (322)
Q Consensus 61 ~C~~C~~~~~-~~~ll~Cd-~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~ 107 (322)
-|.+|+++.+ .+.||.|| .|+.|||..|++........+.|+|+.|.
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 4678999874 56799999 89999999999943222223789999995
No 68
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=98.55 E-value=1.7e-08 Score=91.86 Aligned_cols=74 Identities=12% Similarity=0.101 Sum_probs=48.8
Q ss_pred CCCCCeEEEE-----eCCCceeeeecccCCCCceeEEeeeeehhhhhhhc---cCCCceeeeeccCCCCCcEEEcCCCCC
Q 020737 237 GECPPLVVVY-----DSCEGFTVEADGQIKDMTFIAEYIGDVDFIRNREH---DDCDSMMTLLLATDPSKSLVICPDKRG 308 (322)
Q Consensus 237 g~~~~l~v~~-----~~~kG~gv~a~~~I~~g~fv~EY~Gev~~~~~~~~---~~~~~~~~~~~~~~~~~~~vIda~~~G 308 (322)
....+.+|.. ...+||||.|.++|++|+||+||+|+|..+...+. ....+.+.++... ..++++.+|
T Consensus 100 ~~~~g~eV~~~~Ry~~~~~G~Gv~A~~~I~kGE~I~ey~Geli~~t~~e~~~~~~~~n~f~i~~~~-----~~~~~~l~~ 174 (247)
T 3rq4_A 100 LPESGFTILPCTRYSMETNGAKIVSTRAWKKNEKLELLVGCIAELREADEGLLRAGENDFSIMYST-----RKRSAQLWL 174 (247)
T ss_dssp SGGGCEEEEECCCCTTCSSCEEEEESSCBCTTCEEEEEEEEEEECCGGGGGGCCTTTSCTTEEEET-----TTTEEEEEE
T ss_pred CCCCCcEEEeeeeeeecCCcceEEeCCccCCCCEEEEEEeEEEeCcHHHHHhhhccCCcEEEEecC-----Ccccceeec
Confidence 3345667754 35689999999999999999999999964333221 1111111222111 125788889
Q ss_pred Ceeeecc
Q 020737 309 NIARFIN 315 (322)
Q Consensus 309 NiaRFiN 315 (322)
|+|||||
T Consensus 175 ~~ar~iN 181 (247)
T 3rq4_A 175 GPAAFIN 181 (247)
T ss_dssp SGGGGCE
T ss_pred chhhhcC
Confidence 9999998
No 69
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.28 E-value=9.6e-08 Score=76.99 Aligned_cols=48 Identities=33% Similarity=0.735 Sum_probs=39.7
Q ss_pred cccccccccc-------CCCCceeecccCCCccccccCCCCC---CCCCCCccCcccc
Q 020737 60 VGCEQCGSGE-------RAEELLLCDKCDKGFHMKCLRPIVV---RVPIGTWLCPKCS 107 (322)
Q Consensus 60 ~~C~~C~~~~-------~~~~ll~Cd~C~~~~H~~Cl~Ppl~---~~p~g~W~C~~C~ 107 (322)
.+|.+|..+. +.+.||.|+.|++.||..|+++++. .++.+.|+|+.|.
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 59 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECK 59 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccC
Confidence 5688997754 3579999999999999999997642 4778899999995
No 70
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=98.26 E-value=6.9e-08 Score=95.97 Aligned_cols=53 Identities=25% Similarity=0.498 Sum_probs=41.7
Q ss_pred ccccccccccccccC-CCCceeecccCCCccccccCCCCCCCCC---CCccCcccccCCc
Q 020737 56 DYGDVGCEQCGSGER-AEELLLCDKCDKGFHMKCLRPIVVRVPI---GTWLCPKCSGQRR 111 (322)
Q Consensus 56 ~~~~~~C~~C~~~~~-~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~---g~W~C~~C~~~~~ 111 (322)
+.+..+| +|++..+ .+.||+||.|+.|||..|++ +...+. +.|+|+.|.....
T Consensus 34 ~~~~~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvg--l~~~~~~~~~~~~C~~C~~~~~ 90 (488)
T 3kv5_D 34 PPPPVYC-VCRQPYDVNRFMIECDICKDWFHGSCVG--VEEHHAVDIDLYHCPNCAVLHG 90 (488)
T ss_dssp CCCCEET-TTTEECCTTSCEEEBTTTCCEEEHHHHT--CCGGGGGGEEEBCCHHHHHHHC
T ss_pred CCCCeEE-eCCCcCCCCCCeEEccCCCCceeeeecC--cCcccccCCCEEECCCCcCCcC
Confidence 3446778 9999854 78999999999999999999 444332 5799999987543
No 71
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=98.24 E-value=2.3e-07 Score=80.78 Aligned_cols=52 Identities=23% Similarity=0.555 Sum_probs=39.9
Q ss_pred ccccccccccCCCC----ceeecccCCCccccccCCCCC------CCCC-CCccCcccccCCc
Q 020737 60 VGCEQCGSGERAEE----LLLCDKCDKGFHMKCLRPIVV------RVPI-GTWLCPKCSGQRR 111 (322)
Q Consensus 60 ~~C~~C~~~~~~~~----ll~Cd~C~~~~H~~Cl~Ppl~------~~p~-g~W~C~~C~~~~~ 111 (322)
.+|.+|++..+++. ||+||.|+.|||..|++..-. .+|+ ..|+||.|.....
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~ 65 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHP 65 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSS
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCC
Confidence 56999999876554 999999999999999994311 1232 3799999998654
No 72
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.10 E-value=2.8e-07 Score=73.98 Aligned_cols=49 Identities=33% Similarity=0.672 Sum_probs=39.3
Q ss_pred ccccccccccc------CCCCceeecccCCCccccccCCC--C-CCCCCCCccCcccc
Q 020737 59 DVGCEQCGSGE------RAEELLLCDKCDKGFHMKCLRPI--V-VRVPIGTWLCPKCS 107 (322)
Q Consensus 59 ~~~C~~C~~~~------~~~~ll~Cd~C~~~~H~~Cl~Pp--l-~~~p~g~W~C~~C~ 107 (322)
..+|.+|.+.. ..++||.|+.|++.||.+|++.. + ..++.+.|+|++|.
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCC
Confidence 46799997653 45799999999999999999742 2 24678899999996
No 73
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=98.03 E-value=2.6e-07 Score=90.72 Aligned_cols=54 Identities=24% Similarity=0.507 Sum_probs=40.7
Q ss_pred cccccccccccC-CCCceeecccCCCccccccCCCCCCCC-CCCccCcccccCCccc
Q 020737 59 DVGCEQCGSGER-AEELLLCDKCDKGFHMKCLRPIVVRVP-IGTWLCPKCSGQRRVR 113 (322)
Q Consensus 59 ~~~C~~C~~~~~-~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p-~g~W~C~~C~~~~~~~ 113 (322)
..+| +|++..+ .+.||+||.|+.|||..|++......+ .+.|+|+.|.....+.
T Consensus 5 ~~yC-iC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~~~~~ 60 (447)
T 3kv4_A 5 PVYC-LCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHGPS 60 (447)
T ss_dssp CEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHHHCCC
T ss_pred CeEE-eCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCccccCCc
Confidence 4567 9999854 689999999999999999994322222 2579999998754433
No 74
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=97.96 E-value=7.8e-06 Score=73.62 Aligned_cols=76 Identities=14% Similarity=0.107 Sum_probs=54.0
Q ss_pred CCCeEEEEeCCCceeeeec-ccCCCCceeEEeeeeehhhhhhhccCCCceeeeeccCCCCCcEEEcCCC--CCCeeeecc
Q 020737 239 CPPLVVVYDSCEGFTVEAD-GQIKDMTFIAEYIGDVDFIRNREHDDCDSMMTLLLATDPSKSLVICPDK--RGNIARFIN 315 (322)
Q Consensus 239 ~~~l~v~~~~~kG~gv~a~-~~I~~g~fv~EY~Gev~~~~~~~~~~~~~~~~~~~~~~~~~~~vIda~~--~GNiaRFiN 315 (322)
-..|+|.....-|+||.+. +.|++||.+.+|+||+...... ++. ++..+...+. ...+||++. .||..||||
T Consensus 71 P~~L~vr~S~i~~~Gv~~~~~~IpkGt~fGPY~Ge~~s~~ea---~~~-y~wei~~~~g-~~~~IDgsde~~gNWmRfVn 145 (237)
T 3ray_A 71 PQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKS---AGF-FSWLIVDKNN-RYKSIDGSDETKANWMRYVV 145 (237)
T ss_dssp CTTEEEEECTTSCEEEEECSSCBCTTEEECCCCSEEECC--------C-CEEEEECTTS-CEEEEECCCTTTSCGGGGCE
T ss_pred CCCeEEEEcCCCCcceEEEeCcCCCCCEEEecccEEcChHHc---ccc-ceEEEEcCCC-cEEEEecCCCCCCcceeEEE
Confidence 4468888888889999887 8999999999999999754332 222 3333333221 246899997 799999999
Q ss_pred CCCC
Q 020737 316 GINN 319 (322)
Q Consensus 316 ~~~~ 319 (322)
--.+
T Consensus 146 ~Ar~ 149 (237)
T 3ray_A 146 ISRE 149 (237)
T ss_dssp ECCC
T ss_pred cCCC
Confidence 6543
No 75
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=97.86 E-value=2.8e-06 Score=84.30 Aligned_cols=43 Identities=21% Similarity=0.491 Sum_probs=32.7
Q ss_pred CCCCceeecccCCCccccccCCCCCC-CCCCCccCcccccCCcc
Q 020737 70 RAEELLLCDKCDKGFHMKCLRPIVVR-VPIGTWLCPKCSGQRRV 112 (322)
Q Consensus 70 ~~~~ll~Cd~C~~~~H~~Cl~Ppl~~-~p~g~W~C~~C~~~~~~ 112 (322)
....||+||.|+.|||..|++..... ...+.|+||.|....++
T Consensus 54 ~~~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~~~gp 97 (528)
T 3pur_A 54 NDFQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVPHTGH 97 (528)
T ss_dssp STTSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHHHHCS
T ss_pred cCCCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcCCCCC
Confidence 45689999999999999999943222 22368999999875443
No 76
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=97.65 E-value=2.4e-05 Score=66.05 Aligned_cols=70 Identities=16% Similarity=-0.003 Sum_probs=45.7
Q ss_pred CCCceeeeecccCCCCceeEEeeeeehhhhhhhccCCCceeeee-cc-----CCCCCcEEEcCCC--CCCeeeeccCCCC
Q 020737 248 SCEGFTVEADGQIKDMTFIAEYIGDVDFIRNREHDDCDSMMTLL-LA-----TDPSKSLVICPDK--RGNIARFINGINN 319 (322)
Q Consensus 248 ~~kG~gv~a~~~I~~g~fv~EY~Gev~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~vIda~~--~GNiaRFiN~~~~ 319 (322)
...|+||.|.+.|++||.+.+|+||+....+. .+..++..+. .. ++.....+||++. .||-.||||--.+
T Consensus 28 ~~~g~GVfA~~~IpkGt~fGPy~Ge~~~~~e~--~~~~~~~~v~~~d~~~~~~~~~~~~~iD~~~~~~~NWmr~vn~a~~ 105 (152)
T 3ihx_A 28 DRFLGGVFSKRRIPKRTQFGPVEGPLVRGSEL--KDCYIHLKVSLDKGDRKERDLHEDLWFELSDETLCNWMMFVRPAQN 105 (152)
T ss_dssp CTTTCSEEESSCBCSSCEECCCCSCEECSTTC--CSSSCCCBC---------------CEECCCCTTTSCGGGGCCBCCS
T ss_pred eecCCeEEECceecCCCEEEeeccEEcCHHHh--ccCcceEEEEccccccccccCCccEEEEccCCCCCcceeeeeccCC
Confidence 34699999999999999999999999765432 1222211211 11 1112357899987 6999999996543
No 77
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=97.63 E-value=1.3e-05 Score=60.24 Aligned_cols=50 Identities=32% Similarity=0.693 Sum_probs=40.5
Q ss_pred ccccccccccccCCCCceeecccCCCccccccCCC------------CCCCCCCCccCccccc
Q 020737 58 GDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPI------------VVRVPIGTWLCPKCSG 108 (322)
Q Consensus 58 ~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Pp------------l~~~p~g~W~C~~C~~ 108 (322)
.+..|.||... ..+.++.|..|.+.||..||.++ +...+..-|.|+.|..
T Consensus 14 ~D~~C~VC~~~-t~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Cen 75 (89)
T 1wil_A 14 NDEMCDVCEVW-TAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDN 75 (89)
T ss_dssp CSCCCTTTCCC-CSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCC
T ss_pred CCcccCccccc-cccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccch
Confidence 46889999964 35788899999999999999875 3344666899999965
No 78
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=97.07 E-value=0.00017 Score=57.79 Aligned_cols=40 Identities=28% Similarity=0.578 Sum_probs=30.2
Q ss_pred CCCceeecccCCCccccccCCCCCCCCCC----CccCcccccCC
Q 020737 71 AEELLLCDKCDKGFHMKCLRPIVVRVPIG----TWLCPKCSGQR 110 (322)
Q Consensus 71 ~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g----~W~C~~C~~~~ 110 (322)
...|+.|+.|+.|||..|+++....++.+ .|.||.|....
T Consensus 72 ~~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~~ 115 (117)
T 4bbq_A 72 EKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQED 115 (117)
T ss_dssp GGSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC---
T ss_pred CcceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCCC
Confidence 45688999999999999999876544333 49999998743
No 79
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=96.86 E-value=0.00026 Score=57.31 Aligned_cols=37 Identities=27% Similarity=0.701 Sum_probs=29.3
Q ss_pred CceeecccCCCccccccCCCC------CCCCCC-CccCcccccC
Q 020737 73 ELLLCDKCDKGFHMKCLRPIV------VRVPIG-TWLCPKCSGQ 109 (322)
Q Consensus 73 ~ll~Cd~C~~~~H~~Cl~Ppl------~~~p~g-~W~C~~C~~~ 109 (322)
.||.||.|..|||..|++..- ..+|+. .|.||.|...
T Consensus 1 ~mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~ 44 (140)
T 2ku7_A 1 SMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTER 44 (140)
T ss_dssp CCCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTT
T ss_pred CccccccCCCccCCcccccCHHHHHHHhhccccceeeCcccccc
Confidence 489999999999999998432 345644 7999999864
No 80
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=95.89 E-value=0.0057 Score=52.48 Aligned_cols=51 Identities=18% Similarity=0.212 Sum_probs=33.1
Q ss_pred ccccccccccc-CCCCceeecccCCCccccccCCCCCCCCCC----CccCcccccCC
Q 020737 59 DVGCEQCGSGE-RAEELLLCDKCDKGFHMKCLRPIVVRVPIG----TWLCPKCSGQR 110 (322)
Q Consensus 59 ~~~C~~C~~~~-~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g----~W~C~~C~~~~ 110 (322)
..+| .|+... ..-.|++|+.|.+|||..|+......+-.+ ...|..|....
T Consensus 5 ~~yC-YCG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~g 60 (177)
T 3rsn_A 5 AGSV-DEENGRQLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHSG 60 (177)
T ss_dssp -------CTTCCTTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTSTTS
T ss_pred eeEE-EcCCCCCCCceeEeeccccceecHHHhcccccCccccceeEEEEccccCCCC
Confidence 3567 788754 345799999999999999998655443333 35699998743
No 81
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=95.55 E-value=0.0027 Score=53.50 Aligned_cols=49 Identities=27% Similarity=0.723 Sum_probs=39.9
Q ss_pred cccccccccccCCCCceeec--ccCCCccccccCCCCCC------CCCCCccCcccccCC
Q 020737 59 DVGCEQCGSGERAEELLLCD--KCDKGFHMKCLRPIVVR------VPIGTWLCPKCSGQR 110 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd--~C~~~~H~~Cl~Ppl~~------~p~g~W~C~~C~~~~ 110 (322)
+.+|.+|+.+ +.+++|| .|.+.|-..|+.--+.. .....|.|--|....
T Consensus 79 ~~yC~wC~~G---g~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~ 135 (159)
T 3a1b_A 79 QSYCTICCGG---REVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKG 135 (159)
T ss_dssp BSSCTTTSCC---SEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSC
T ss_pred cceeeEecCC---CeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCcc
Confidence 7899999998 8999999 79999999998533322 445689999999753
No 82
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=93.61 E-value=0.025 Score=44.65 Aligned_cols=38 Identities=24% Similarity=0.652 Sum_probs=32.1
Q ss_pred ccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccC
Q 020737 62 CEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLC 103 (322)
Q Consensus 62 C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C 103 (322)
|.+|++. ..+.|..|+.+||..|+.+.|...+.+.|+|
T Consensus 61 C~~C~k~----~~~~C~~Cp~sfC~~c~~g~l~~~~~~~~~c 98 (107)
T 4gne_A 61 CDECSSA----AVSFCEFCPHSFCKDHEKGALVPSALEGRLC 98 (107)
T ss_dssp CTTTCSB----CCEECSSSSCEECTTTCTTSCEECTTTTCEE
T ss_pred CCcCCCC----CCcCcCCCCcchhhhccCCcceecCCCCcee
Confidence 5566664 2378999999999999999999888899997
No 83
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=93.60 E-value=0.014 Score=55.88 Aligned_cols=64 Identities=25% Similarity=0.693 Sum_probs=46.3
Q ss_pred ccccccccccccCCCCceeec--ccCCCccccccCCCCCC------CCCCCccCcccccCCcccccc------hhhhhhh
Q 020737 58 GDVGCEQCGSGERAEELLLCD--KCDKGFHMKCLRPIVVR------VPIGTWLCPKCSGQRRVRSFS------QRKIIDF 123 (322)
Q Consensus 58 ~~~~C~~C~~~~~~~~ll~Cd--~C~~~~H~~Cl~Ppl~~------~p~g~W~C~~C~~~~~~~~~~------~~~~~~f 123 (322)
-+.+|.+|+.+ +.+++|| .|.+.|-..|+.--+.. .....|.|--|..... ..+. ..++.+|
T Consensus 92 ~~~yCr~C~~G---g~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p~-~~ll~~r~~w~~~~~~f 167 (386)
T 2pv0_B 92 YQSYCSICCSG---ETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSSR-SGLLQRRRKWRSQLKAF 167 (386)
T ss_dssp SBCSCTTTCCC---SSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCCE-ETTEEBCSSHHHHHHHH
T ss_pred CcccceEcCCC---CeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCcch-HhhhhhhhhHHHHHHHH
Confidence 37899999998 8999999 99999999998643321 2235799999997532 2222 4566777
Q ss_pred hc
Q 020737 124 FK 125 (322)
Q Consensus 124 ~~ 125 (322)
|.
T Consensus 168 ~~ 169 (386)
T 2pv0_B 168 YD 169 (386)
T ss_dssp HH
T ss_pred Hh
Confidence 63
No 84
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=91.63 E-value=0.02 Score=40.26 Aligned_cols=51 Identities=18% Similarity=0.239 Sum_probs=34.3
Q ss_pred cccccccccccccCCCCceee--cccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 57 YGDVGCEQCGSGERAEELLLC--DKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 57 ~~~~~C~~C~~~~~~~~ll~C--d~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
.+...|.||....+...+.-| .+.-++||..|+...+.. .+.+.|+.|...
T Consensus 4 ~~~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~--~~~~~C~~C~~~ 56 (60)
T 1vyx_A 4 EDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTI--SRNTACQICGVV 56 (60)
T ss_dssp CSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHH--HTCSBCTTTCCB
T ss_pred CCCCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHh--CCCCccCCCCCe
Confidence 346789999876433333344 334459999999977653 246899999863
No 85
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=90.33 E-value=0.12 Score=34.50 Aligned_cols=46 Identities=26% Similarity=0.564 Sum_probs=32.9
Q ss_pred cccccccccccCCCC-ceeecccCCCccccccCCCCCCCCCCCccCccccc
Q 020737 59 DVGCEQCGSGERAEE-LLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSG 108 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~-ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~ 108 (322)
+..|.+|...-..+. .+....|...||..|+...+.. ...||.|+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~----~~~CP~Cr~ 51 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS----HSTCPLCRL 51 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT----CCSCSSSCC
T ss_pred CCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHc----CCcCcCCCC
Confidence 467999987644333 3334469999999999876544 457999985
No 86
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=90.20 E-value=0.04 Score=38.94 Aligned_cols=49 Identities=22% Similarity=0.347 Sum_probs=34.5
Q ss_pred cccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 57 YGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 57 ~~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
.+...|.||...-..+..+..-.|...||..|+...+.. ...||.|+..
T Consensus 12 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~ 60 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLIT----NKKCPICRVD 60 (69)
T ss_dssp TCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHH----CSBCTTTCSB
T ss_pred CCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHc----CCCCcCcCcc
Confidence 346779999875444444555579999999999865443 2369999864
No 87
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.10 E-value=0.05 Score=40.45 Aligned_cols=50 Identities=20% Similarity=0.375 Sum_probs=33.2
Q ss_pred ccccccccccccC-CCCcee-e--cccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 58 GDVGCEQCGSGER-AEELLL-C--DKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 58 ~~~~C~~C~~~~~-~~~ll~-C--d~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
+...|.||....+ .+.++. | .+...+||..|+...+.. .+...||.|...
T Consensus 14 ~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~--~~~~~CplCr~~ 67 (80)
T 2d8s_A 14 SQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKS--SDTRCCELCKYE 67 (80)
T ss_dssp TSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHH--HCCSBCSSSCCB
T ss_pred CCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhh--CCCCCCCCCCCe
Confidence 3567999986543 334442 2 233489999999977654 234689999874
No 88
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=88.82 E-value=0.12 Score=38.76 Aligned_cols=49 Identities=20% Similarity=0.402 Sum_probs=35.1
Q ss_pred cccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 57 YGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 57 ~~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
.++..|.||...-..+..+..-.|...||..|+...+.. .-.||.|+..
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~----~~~CP~Cr~~ 86 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQK----SGTCPVCRCM 86 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTT----TCBCTTTCCB
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHc----CCcCcCcCcc
Confidence 346789999876544444444459999999999876643 2489999864
No 89
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.84 E-value=0.059 Score=38.85 Aligned_cols=48 Identities=25% Similarity=0.551 Sum_probs=34.9
Q ss_pred ccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 58 GDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 58 ~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
+...|.||...-..+..+..-.|...||..|+...+.. ...||.|+..
T Consensus 22 ~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~----~~~CP~Cr~~ 69 (75)
T 1x4j_A 22 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKA----NRTCPICRAD 69 (75)
T ss_dssp SCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHH----CSSCTTTCCC
T ss_pred CCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHc----CCcCcCcCCc
Confidence 45779999976544555555569999999999865533 2479999864
No 90
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=87.38 E-value=0.27 Score=35.41 Aligned_cols=48 Identities=23% Similarity=0.488 Sum_probs=33.6
Q ss_pred ccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 58 GDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 58 ~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
+...|.||...-.....+.--.|...||..|+...+.. ...||.|+..
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~ 61 (78)
T 2ect_A 14 SGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQ----HDSCPVCRKS 61 (78)
T ss_dssp SSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTT----TCSCTTTCCC
T ss_pred CCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHc----CCcCcCcCCc
Confidence 35779999876443333333358899999999866543 3589999874
No 91
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=87.14 E-value=0.55 Score=35.30 Aligned_cols=45 Identities=27% Similarity=0.629 Sum_probs=33.6
Q ss_pred ccccccccccCC------CCceeecccCC-CccccccCCCCCCCCCCCccCccccc
Q 020737 60 VGCEQCGSGERA------EELLLCDKCDK-GFHMKCLRPIVVRVPIGTWLCPKCSG 108 (322)
Q Consensus 60 ~~C~~C~~~~~~------~~ll~Cd~C~~-~~H~~Cl~Ppl~~~p~g~W~C~~C~~ 108 (322)
..| +|.++.+. -.||+|..|.. +-|..|.. |.. ....|.|..|..
T Consensus 27 ~~C-lc~~GR~~~~~~~~W~L~lC~~Cgs~gtH~~Cs~--l~~-~~~~weC~~C~~ 78 (85)
T 1weq_A 27 PIC-LYEQGRDSFEDEGRWRLILCATCGSHGTHRDCSS--LRP-NSKKWECNECLP 78 (85)
T ss_dssp SCC-CSTTCSSCCBSSSTTBCEECSSSCCCEECSGGGT--CCT-TCSCCCCTTTSC
T ss_pred ccc-CCCCCcccccCCCCEEEEeCcccCCchhHHHHhC--CcC-CCCCEECCcCcc
Confidence 345 66665432 47899999997 99999998 433 345899999985
No 92
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=86.18 E-value=0.26 Score=46.58 Aligned_cols=52 Identities=27% Similarity=0.508 Sum_probs=35.4
Q ss_pred cccccccccccccCC-CCc--eeec--ccCCCccccccCCCCCCCCCC-------CccCccccc
Q 020737 57 YGDVGCEQCGSGERA-EEL--LLCD--KCDKGFHMKCLRPIVVRVPIG-------TWLCPKCSG 108 (322)
Q Consensus 57 ~~~~~C~~C~~~~~~-~~l--l~Cd--~C~~~~H~~Cl~Ppl~~~p~g-------~W~C~~C~~ 108 (322)
++...|.||-....+ +.+ ..|+ .|...||..|+..++...+.+ -=-||-|..
T Consensus 306 e~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~ 369 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKA 369 (381)
T ss_dssp CSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCC
T ss_pred cCCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCC
Confidence 346779999876544 333 4798 799999999998544332221 124999986
No 93
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.05 E-value=0.22 Score=36.64 Aligned_cols=48 Identities=23% Similarity=0.520 Sum_probs=32.0
Q ss_pred ccccccccccccC-----------CCC-ceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 58 GDVGCEQCGSGER-----------AEE-LLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 58 ~~~~C~~C~~~~~-----------~~~-ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
++..|.||...-. .+. .+.--.|.-.||..|+...+..- -.||.|+..
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~----~~CP~CR~~ 73 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQN----NRCPLCQQD 73 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTC----CBCTTTCCB
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhC----CCCCCcCCC
Confidence 3456777776432 222 33333699999999999776653 289999864
No 94
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=84.36 E-value=0.18 Score=33.67 Aligned_cols=47 Identities=26% Similarity=0.600 Sum_probs=33.2
Q ss_pred cccccccccccc-CCCCceeecccCCCccccccCCCCCCCCCCCccCccccc
Q 020737 58 GDVGCEQCGSGE-RAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSG 108 (322)
Q Consensus 58 ~~~~C~~C~~~~-~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~ 108 (322)
++..|.||...- +.+..+..-.|...||..|+...+..- ..||.|+.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~----~~CP~Cr~ 51 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG----YRCPLCSG 51 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHT----CCCTTSCC
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcC----CcCCCCCC
Confidence 356799998753 233445566799999999998554332 57999975
No 95
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=82.67 E-value=0.43 Score=36.97 Aligned_cols=51 Identities=24% Similarity=0.486 Sum_probs=32.9
Q ss_pred cccccccccccCCC---------------CceeecccCCCccccccCCCCCCCC-CCCccCcccccC
Q 020737 59 DVGCEQCGSGERAE---------------ELLLCDKCDKGFHMKCLRPIVVRVP-IGTWLCPKCSGQ 109 (322)
Q Consensus 59 ~~~C~~C~~~~~~~---------------~ll~Cd~C~~~~H~~Cl~Ppl~~~p-~g~W~C~~C~~~ 109 (322)
+..|.||...-... ..+..-.|.-.||..|+...+.... ...-.||.|+..
T Consensus 25 ~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~ 91 (114)
T 1v87_A 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTI 91 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCB
T ss_pred CCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCc
Confidence 45799997753211 1222456999999999987653211 234689999864
No 96
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.66 E-value=0.48 Score=34.62 Aligned_cols=47 Identities=21% Similarity=0.423 Sum_probs=35.4
Q ss_pred cccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
...|.||...-.. -+.|..|...||..|+...+.... .=.||.|...
T Consensus 15 i~~C~IC~~~i~~--g~~C~~C~h~fH~~Ci~kWl~~~~--~~~CP~Cr~~ 61 (74)
T 2ct0_A 15 VKICNICHSLLIQ--GQSCETCGIRMHLPCVAKYFQSNA--EPRCPHCNDY 61 (74)
T ss_dssp SCBCSSSCCBCSS--SEECSSSCCEECHHHHHHHSTTCS--SCCCTTTCSC
T ss_pred CCcCcchhhHccc--CCccCCCCchhhHHHHHHHHHhcC--CCCCCCCcCc
Confidence 4679999986543 356889999999999987765432 2479999864
No 97
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=80.77 E-value=0.21 Score=35.63 Aligned_cols=47 Identities=26% Similarity=0.466 Sum_probs=32.3
Q ss_pred cccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
+..|.||...-.....+.--.|...||..|+...+.. ...||.|+..
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~----~~~CP~Cr~~ 61 (74)
T 2ep4_A 15 HELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEV----RKVCPLCNMP 61 (74)
T ss_dssp SCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHH----CSBCTTTCCB
T ss_pred CCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHc----CCcCCCcCcc
Confidence 5679999986543333322358889999999865433 2379999863
No 98
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=76.84 E-value=0.45 Score=37.42 Aligned_cols=36 Identities=22% Similarity=0.398 Sum_probs=28.3
Q ss_pred ccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 60 ~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
.+|.+|++. -|+.|+..||+.|++++ .|.|..|...
T Consensus 8 ~~C~~C~~~-------~C~~C~~c~~~~~~~~~-------~~~~~~c~~~ 43 (117)
T 4bbq_A 8 RKCKACVQG-------ECGVCHYCRDMKKFGGP-------GRMKQSCVLR 43 (117)
T ss_dssp SCSHHHHSC-------CCSCSHHHHHSGGGTSC-------CCSCCCCGGG
T ss_pred CcCcCcCCc-------CCCCCCCCcCCcccCCC-------Cccccchhhe
Confidence 568888875 29999999999999865 4888888653
No 99
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=76.15 E-value=2.8 Score=28.09 Aligned_cols=44 Identities=25% Similarity=0.668 Sum_probs=29.9
Q ss_pred ccccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 56 DYGDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 56 ~~~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
+.+...|.+|...-..-.++ .|...|+..|+.. ....||.|+..
T Consensus 3 e~~~~~C~IC~~~~~~p~~l---~CgH~fC~~Ci~~-------~~~~CP~Cr~~ 46 (56)
T 1bor_A 3 EFQFLRCQQCQAEAKCPKLL---PCLHTLCSGCLEA-------SGMQCPICQAP 46 (56)
T ss_dssp SCCCSSCSSSCSSCBCCSCS---TTSCCSBTTTCSS-------SSSSCSSCCSS
T ss_pred cccCCCceEeCCccCCeEEc---CCCCcccHHHHcc-------CCCCCCcCCcE
Confidence 34567899998754332333 4777888888763 34579999874
No 100
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=74.85 E-value=0.7 Score=35.97 Aligned_cols=48 Identities=17% Similarity=0.367 Sum_probs=32.5
Q ss_pred ccccccccccccCCC---------------CceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 58 GDVGCEQCGSGERAE---------------ELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 58 ~~~~C~~C~~~~~~~---------------~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
++..|.||...-... ..+.--.|...||..|+...|.. .-.||.|+..
T Consensus 36 ~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~----~~~CP~Cr~~ 98 (106)
T 3dpl_R 36 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT----RQVCPLDNRE 98 (106)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTT----CSBCSSSCSB
T ss_pred CCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHc----CCcCcCCCCc
Confidence 456788887653221 12233469999999999977654 3479999874
No 101
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=74.80 E-value=0.66 Score=36.90 Aligned_cols=49 Identities=16% Similarity=0.355 Sum_probs=1.4
Q ss_pred cccccccccccccCCC---------------CceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 57 YGDVGCEQCGSGERAE---------------ELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 57 ~~~~~C~~C~~~~~~~---------------~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
.++..|.||...-... ..+.--.|.-.||..|+...|.. .-.||.|+..
T Consensus 46 ~~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~----~~~CP~Cr~~ 109 (117)
T 4a0k_B 46 IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT----RQVCPLDNRE 109 (117)
T ss_dssp CCC-----------------------------------------------------------------
T ss_pred CCCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHc----CCcCCCCCCe
Confidence 3457799998753211 11112368899999999977655 2469999864
No 102
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.16 E-value=1.9 Score=28.66 Aligned_cols=45 Identities=18% Similarity=0.513 Sum_probs=30.3
Q ss_pred ccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCccc
Q 020737 58 GDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106 (322)
Q Consensus 58 ~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C 106 (322)
+...|.+|...-....++ .|...||..|+...+... .+...||.|
T Consensus 14 ~~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~~-~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKEPVII---ECGHNFCKACITRWWEDL-ERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSSCCCC---SSCCCCCHHHHHHHTTSS-CCSCCCSCC
T ss_pred cCCCCccCCcccCccEeC---CCCCccCHHHHHHHHHhc-CCCCCCCCC
Confidence 357799998764333332 688899999998654432 245678877
No 103
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=70.49 E-value=5 Score=28.32 Aligned_cols=49 Identities=20% Similarity=0.335 Sum_probs=33.6
Q ss_pred cccccccccccCCCCceeecccCCCccccccCCCCCCC---CCCCccCcccccCC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRV---PIGTWLCPKCSGQR 110 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~---p~g~W~C~~C~~~~ 110 (322)
...|.+|...-..-.++ .|+..||..|+...+... ..+.-.||.|...-
T Consensus 12 ~~~C~IC~~~~~~p~~l---~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~ 63 (79)
T 2egp_A 12 EVTCPICLELLTEPLSL---DCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISY 63 (79)
T ss_dssp CCEETTTTEECSSCCCC---SSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCC
T ss_pred CCCCcCCCcccCCeeEC---CCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcC
Confidence 57799998754332222 688899999998665542 12367899998754
No 104
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=70.31 E-value=4 Score=39.96 Aligned_cols=32 Identities=16% Similarity=0.132 Sum_probs=29.8
Q ss_pred CCCCCeEEEEeCCCceeeeecccCCCCceeEE
Q 020737 237 GECPPLVVVYDSCEGFTVEADGQIKDMTFIAE 268 (322)
Q Consensus 237 g~~~~l~v~~~~~kG~gv~a~~~I~~g~fv~E 268 (322)
|-.+.++|++++.+|.||.|.++|+.|+.|.+
T Consensus 4 ~~~~~v~v~~~~~~GR~lvAtr~i~~Ge~Il~ 35 (490)
T 3n71_A 4 GSMENVEVFTSEGKGRGLKATKEFWAADVIFA 35 (490)
T ss_dssp TCCTTEEEEECSSSCEEEEESSCBCTTCEEEE
T ss_pred CCCCceEEEecCCCCceEEeccCCCCCCEEEe
Confidence 56789999999999999999999999999975
No 105
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.20 E-value=1.5 Score=30.22 Aligned_cols=45 Identities=18% Similarity=0.474 Sum_probs=32.1
Q ss_pred cccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
...|.+|...-....+ -.|+..||..|+...+. .+...||.|...
T Consensus 15 ~~~C~IC~~~~~~p~~---~~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~ 59 (66)
T 2ecy_A 15 KYKCEKCHLVLCSPKQ---TECGHRFCESCMAALLS---SSSPKCTACQES 59 (66)
T ss_dssp CEECTTTCCEESSCCC---CSSSCCCCHHHHHHHHT---TSSCCCTTTCCC
T ss_pred CCCCCCCChHhcCeeE---CCCCCHHHHHHHHHHHH---hCcCCCCCCCcC
Confidence 5779999875432222 37888999999986654 345679999874
No 106
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=70.15 E-value=3 Score=30.92 Aligned_cols=21 Identities=24% Similarity=0.686 Sum_probs=14.3
Q ss_pred cCCCCCCCCCCCccCcccccCC
Q 020737 89 LRPIVVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 89 l~Ppl~~~p~g~W~C~~C~~~~ 110 (322)
-+.+...+|+ +|.||.|...+
T Consensus 50 pGT~fedlPd-dW~CPvCga~K 70 (81)
T 2kn9_A 50 AGTRWDDIPD-DWSCPDCGAAK 70 (81)
T ss_dssp TTCCTTTSCT-TCCCTTTCCCG
T ss_pred CCCChhHCCC-CCcCCCCCCCH
Confidence 3444455654 79999998754
No 107
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=69.20 E-value=1.8 Score=26.40 Aligned_cols=12 Identities=33% Similarity=1.046 Sum_probs=10.1
Q ss_pred CCCCccCccccc
Q 020737 97 PIGTWLCPKCSG 108 (322)
Q Consensus 97 p~g~W~C~~C~~ 108 (322)
..|+|.|+.|..
T Consensus 3 ~~gDW~C~~C~~ 14 (33)
T 2k1p_A 3 SANDWQCKTCSN 14 (33)
T ss_dssp SSSSCBCSSSCC
T ss_pred CCCCcccCCCCC
Confidence 468999999975
No 108
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=68.71 E-value=4.4 Score=39.02 Aligned_cols=31 Identities=10% Similarity=-0.054 Sum_probs=28.2
Q ss_pred CCCCeEEEEeCCCceeeeecccCCCCceeEE
Q 020737 238 ECPPLVVVYDSCEGFTVEADGQIKDMTFIAE 268 (322)
Q Consensus 238 ~~~~l~v~~~~~kG~gv~a~~~I~~g~fv~E 268 (322)
-...++++.++.+|.||+|.++|+.|+.|.+
T Consensus 5 ~~~~ve~~~~~~~GRgl~A~r~i~~Ge~Il~ 35 (433)
T 3qww_A 5 ARGGLERFCSAGKGRGLRALRPFHVGDLLFS 35 (433)
T ss_dssp SSTTEEEEECTTSCEEEEESSCBCTTCEEEE
T ss_pred CCCcEEEeecCCCcCeEEECCCCCCCCEEEe
Confidence 3578999999999999999999999998865
No 109
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.99 E-value=1.1 Score=31.51 Aligned_cols=45 Identities=16% Similarity=0.263 Sum_probs=30.7
Q ss_pred ccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 58 GDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 58 ~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
+...|.||...-. ..+.- .|...||..|+...+.. ...||.|+..
T Consensus 14 ~~~~C~IC~~~~~--~~~~~-~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~ 58 (71)
T 2d8t_A 14 TVPECAICLQTCV--HPVSL-PCKHVFCYLCVKGASWL----GKRCALCRQE 58 (71)
T ss_dssp SCCBCSSSSSBCS--SEEEE-TTTEEEEHHHHHHCTTC----SSBCSSSCCB
T ss_pred CCCCCccCCcccC--CCEEc-cCCCHHHHHHHHHHHHC----CCcCcCcCch
Confidence 3567999987532 22222 58889999998755433 2689999874
No 110
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=67.87 E-value=5.1 Score=27.03 Aligned_cols=18 Identities=28% Similarity=0.872 Sum_probs=12.6
Q ss_pred CCCCCCCCCccCcccccCC
Q 020737 92 IVVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 92 pl~~~p~g~W~C~~C~~~~ 110 (322)
+...+|+ +|.||.|...+
T Consensus 29 ~f~~lP~-dw~CP~Cg~~K 46 (52)
T 1e8j_A 29 KFEDLPD-DWACPVCGASK 46 (52)
T ss_dssp CTTSSCT-TCCCSSSCCCT
T ss_pred chHHCCC-CCcCCCCCCcH
Confidence 3444554 79999998754
No 111
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=65.42 E-value=2.1 Score=29.94 Aligned_cols=47 Identities=26% Similarity=0.615 Sum_probs=32.4
Q ss_pred cccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
...|.+|...-. ...++ .|+..||..|+...+.. ..+.-.||.|...
T Consensus 20 ~~~C~IC~~~~~-~~~~~--~CgH~fC~~Ci~~~~~~-~~~~~~CP~Cr~~ 66 (73)
T 2ysl_A 20 EVICPICLDILQ-KPVTI--DCGHNFCLKCITQIGET-SCGFFKCPLCKTS 66 (73)
T ss_dssp CCBCTTTCSBCS-SEEEC--TTCCEEEHHHHHHHCSS-SCSCCCCSSSCCC
T ss_pred CCEeccCCcccC-CeEEc--CCCChhhHHHHHHHHHc-CCCCCCCCCCCCc
Confidence 577999997532 22222 79999999999865542 1245689999874
No 112
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=63.94 E-value=4.2 Score=27.48 Aligned_cols=17 Identities=29% Similarity=1.007 Sum_probs=12.0
Q ss_pred CCCCCCCCccCcccccCC
Q 020737 93 VVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 93 l~~~p~g~W~C~~C~~~~ 110 (322)
...+|+ +|.||.|...+
T Consensus 29 f~~lP~-dw~CP~Cg~~K 45 (52)
T 1yk4_A 29 FEDLPD-DWVCPLCGAPK 45 (52)
T ss_dssp GGGSCT-TCBCTTTCCBG
T ss_pred HhHCCC-CCcCCCCCCCH
Confidence 344554 79999998743
No 113
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=63.65 E-value=2.7 Score=32.41 Aligned_cols=45 Identities=22% Similarity=0.518 Sum_probs=32.2
Q ss_pred cccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
+..|.+|...-. ..... .|+..||..|+...+. .+...||.|...
T Consensus 15 ~~~C~iC~~~~~-~p~~~--~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~ 59 (115)
T 3l11_A 15 ECQCGICMEILV-EPVTL--PCNHTLCKPCFQSTVE---KASLCCPFCRRR 59 (115)
T ss_dssp HHBCTTTCSBCS-SCEEC--TTSCEECHHHHCCCCC---TTTSBCTTTCCB
T ss_pred CCCCccCCcccC-ceeEc--CCCCHHhHHHHHHHHh---HCcCCCCCCCcc
Confidence 577999987532 22222 7999999999986543 345789999874
No 114
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=62.97 E-value=1.8 Score=26.26 Aligned_cols=11 Identities=45% Similarity=1.192 Sum_probs=9.3
Q ss_pred CCCccCccccc
Q 020737 98 IGTWLCPKCSG 108 (322)
Q Consensus 98 ~g~W~C~~C~~ 108 (322)
.|+|.|+.|..
T Consensus 3 ~gDW~C~~C~~ 13 (32)
T 2lk0_A 3 FEDWLCNKCCL 13 (32)
T ss_dssp CSEEECTTTCC
T ss_pred CCCCCcCcCcC
Confidence 48999999965
No 115
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=62.88 E-value=3.9 Score=29.40 Aligned_cols=18 Identities=22% Similarity=0.737 Sum_probs=12.4
Q ss_pred CCCCCCCCCccCcccccCC
Q 020737 92 IVVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 92 pl~~~p~g~W~C~~C~~~~ 110 (322)
+...+|+ +|.||.|...+
T Consensus 33 ~f~~lPd-dw~CP~Cga~K 50 (70)
T 1dx8_A 33 PFVDLSD-SFMCPACRSPK 50 (70)
T ss_dssp CGGGSCT-TCBCTTTCCBG
T ss_pred chhhCCC-CCcCCCCCCCH
Confidence 3344554 79999998753
No 116
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=62.34 E-value=2.1 Score=38.08 Aligned_cols=47 Identities=21% Similarity=0.420 Sum_probs=35.2
Q ss_pred cccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
...|.+|..-.-. -+.|..|+..||..|+.-.+.. .+.--||.|...
T Consensus 180 i~~C~iC~~iv~~--g~~C~~C~~~~H~~C~~~~~~~--~~~~~CP~C~~~ 226 (238)
T 3nw0_A 180 VKICNICHSLLIQ--GQSCETCGIRMHLPCVAKYFQS--NAEPRCPHCNDY 226 (238)
T ss_dssp CCBCTTTCSBCSS--CEECSSSCCEECHHHHHHHTTT--CSSCBCTTTCCB
T ss_pred CCcCcchhhHHhC--CcccCccChHHHHHHHHHHHHh--CCCCCCCCCCCC
Confidence 5679999986543 3789899999999999754333 234589999764
No 117
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.16 E-value=1.4 Score=30.80 Aligned_cols=44 Identities=27% Similarity=0.517 Sum_probs=31.6
Q ss_pred ccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 58 GDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 58 ~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
+...|.+|...-.. .--.|...||..|+...+. ....||.|+..
T Consensus 14 ~~~~C~IC~~~~~~----~~~~CgH~fc~~Ci~~~~~----~~~~CP~Cr~~ 57 (70)
T 2ecn_A 14 DEEECCICMDGRAD----LILPCAHSFCQKCIDKWSD----RHRNCPICRLQ 57 (70)
T ss_dssp CCCCCSSSCCSCCS----EEETTTEEECHHHHHHSSC----CCSSCHHHHHC
T ss_pred CCCCCeeCCcCccC----cccCCCCcccHHHHHHHHH----CcCcCCCcCCc
Confidence 35779999876433 2235888899999986554 35789999864
No 118
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=62.03 E-value=3.4 Score=30.04 Aligned_cols=49 Identities=22% Similarity=0.491 Sum_probs=32.3
Q ss_pred ccccccccccccCCCC--ceeecccCCCccccccCCCCCCCCCCCccCcccccCC
Q 020737 58 GDVGCEQCGSGERAEE--LLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 58 ~~~~C~~C~~~~~~~~--ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~~ 110 (322)
++..|.||...-.... ++-| .|+..|+..|+.-.+. .+...||.|+..-
T Consensus 10 ~~~~CpICle~~~~~d~~~~p~-~CGH~fC~~Cl~~~~~---~~~~~CP~CR~~~ 60 (78)
T 1e4u_A 10 DPVECPLCMEPLEIDDINFFPC-TCGYQICRFCWHRIRT---DENGLCPACRKPY 60 (78)
T ss_dssp CCCBCTTTCCBCCTTTTTCCSS-TTSCCCCHHHHHHHTT---SSCSBCTTTCCBC
T ss_pred cCCcCCccCccCcccccccccc-CCCCCcCHHHHHHHHh---cCCCCCCCCCCcc
Confidence 3577999998643221 2223 5888899999864332 2467999999754
No 119
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=61.53 E-value=3.9 Score=30.78 Aligned_cols=22 Identities=23% Similarity=0.699 Sum_probs=14.7
Q ss_pred ccCCCCCCCCCCCccCcccccCC
Q 020737 88 CLRPIVVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 88 Cl~Ppl~~~p~g~W~C~~C~~~~ 110 (322)
.-+.+...+|+ +|.||.|...+
T Consensus 57 ~pGT~fedlPd-dW~CPvCga~K 78 (87)
T 1s24_A 57 TPGTRFEDIPD-DWCCPDCGATK 78 (87)
T ss_dssp CSCCCGGGCCT-TCCCSSSCCCG
T ss_pred CCCCChhHCCC-CCCCCCCCCCH
Confidence 34444455654 79999998743
No 120
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.67 E-value=2.2 Score=30.70 Aligned_cols=46 Identities=20% Similarity=0.299 Sum_probs=31.6
Q ss_pred ccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccCC
Q 020737 58 GDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 58 ~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~~ 110 (322)
+...|.+|...-.. ..+ -.|...||..|+...+.. ...||.|...-
T Consensus 14 ~~~~C~IC~~~~~~-p~~--~~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~~ 59 (81)
T 2csy_A 14 IPFRCFICRQAFQN-PVV--TKCRHYFCESCALEHFRA----TPRCYICDQPT 59 (81)
T ss_dssp CCSBCSSSCSBCCS-EEE--CTTSCEEEHHHHHHHHHH----CSBCSSSCCBC
T ss_pred CCCCCcCCCchhcC-eeE--ccCCCHhHHHHHHHHHHC----CCcCCCcCccc
Confidence 35789999875322 222 479999999998755432 35799998753
No 121
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.27 E-value=0.77 Score=31.75 Aligned_cols=48 Identities=29% Similarity=0.697 Sum_probs=32.7
Q ss_pred ccccccccccccC----CCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 58 GDVGCEQCGSGER----AEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 58 ~~~~C~~C~~~~~----~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
+...|.||...-. .+..+.--.|...||..|+...+.. .-.||.|+..
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~ 65 (69)
T 2ea6_A 14 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN----ANTCPTCRKK 65 (69)
T ss_dssp CCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH----CSSCTTTCCC
T ss_pred CCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc----CCCCCCCCCc
Confidence 3577999987431 2344455689999999999754432 2379999863
No 122
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=60.23 E-value=4.7 Score=27.55 Aligned_cols=17 Identities=29% Similarity=0.999 Sum_probs=12.0
Q ss_pred CCCCCCCCccCcccccCC
Q 020737 93 VVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 93 l~~~p~g~W~C~~C~~~~ 110 (322)
...+|+ +|.||.|...+
T Consensus 30 f~~lP~-dw~CP~Cga~K 46 (55)
T 2v3b_B 30 WEDIPA-DWVCPDCGVGK 46 (55)
T ss_dssp GGGSCT-TCCCTTTCCCG
T ss_pred hhHCCC-CCcCCCCCCCH
Confidence 344554 79999998753
No 123
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.76 E-value=1.8 Score=31.47 Aligned_cols=51 Identities=24% Similarity=0.428 Sum_probs=33.5
Q ss_pred ccccccccccccCCCCc-eeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 58 GDVGCEQCGSGERAEEL-LLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 58 ~~~~C~~C~~~~~~~~l-l~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
+...|.+|...-..+.. ..--.|+..||..|+...+..- .+...||.|...
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~-~~~~~CP~Cr~~ 65 (88)
T 2ct2_A 14 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASS-INGVRCPFCSKI 65 (88)
T ss_dssp SCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHC-SSCBCCTTTCCC
T ss_pred CCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcC-CCCcCCCCCCCc
Confidence 35779999876433221 2222699999999997554322 235789999874
No 124
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=59.42 E-value=2.8 Score=31.42 Aligned_cols=31 Identities=26% Similarity=0.712 Sum_probs=24.1
Q ss_pred cccccccccccCCCCceeecc--cCCCccccccC
Q 020737 59 DVGCEQCGSGERAEELLLCDK--CDKGFHMKCLR 90 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~--C~~~~H~~Cl~ 90 (322)
...|.+|++. ..|..|.|.. |..+||..|-.
T Consensus 17 ~l~C~iC~~~-~~GAciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 17 KLTCYLCKQK-GVGASIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp CCCBTTTTBC-CSSCEEECSCTTTCCEEEHHHHH
T ss_pred cCCCcCCCCC-CCcEeEecCCCCCCCcCcHHHHH
Confidence 4679999752 2378888974 99999999964
No 125
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.36 E-value=1.2 Score=30.35 Aligned_cols=44 Identities=27% Similarity=0.663 Sum_probs=28.7
Q ss_pred cccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCccc
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKC 106 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C 106 (322)
+..|.||...-. ...+. .|+..||..|+...+.. ..+...||.|
T Consensus 20 ~~~C~IC~~~~~-~p~~~--~CgH~fC~~Ci~~~~~~-~~~~~~CP~C 63 (63)
T 2ysj_A 20 EVICPICLDILQ-KPVTI--DCGHNFCLKCITQIGET-SCGFFKCPLC 63 (63)
T ss_dssp CCBCTTTCSBCS-SCEEC--TTSSEECHHHHHHHHHH-CSSCCCCSCC
T ss_pred CCCCCcCCchhC-CeEEe--CCCCcchHHHHHHHHHc-CCCCCcCcCC
Confidence 577999987533 22332 78889999998755432 1234578877
No 126
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=58.18 E-value=1.5 Score=36.23 Aligned_cols=46 Identities=20% Similarity=0.497 Sum_probs=33.6
Q ss_pred cccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
...|.+|...- ..-+.+..|+..||..|+...+. .+...||.|...
T Consensus 54 ~~~C~IC~~~~--~~p~~~~~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~ 99 (165)
T 2ckl_B 54 ELMCPICLDML--KNTMTTKECLHRFCADCIITALR---SGNKECPTCRKK 99 (165)
T ss_dssp HHBCTTTSSBC--SSEEEETTTCCEEEHHHHHHHHH---TTCCBCTTTCCB
T ss_pred CCCCcccChHh--hCcCEeCCCCChhHHHHHHHHHH---hCcCCCCCCCCc
Confidence 56899998753 23444568999999999986544 235689999874
No 127
>4b2u_A S67; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=57.80 E-value=2.5 Score=25.41 Aligned_cols=13 Identities=38% Similarity=1.020 Sum_probs=11.0
Q ss_pred CCCccCcccccCC
Q 020737 98 IGTWLCPKCSGQR 110 (322)
Q Consensus 98 ~g~W~C~~C~~~~ 110 (322)
+|+|.|..|..+.
T Consensus 16 egdwcchkcvpeg 28 (36)
T 4b2u_A 16 EGDWCCHKCVPEG 28 (36)
T ss_dssp GCCSSSSEEEEET
T ss_pred ccCeeeecccccC
Confidence 7899999998753
No 128
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=57.54 E-value=1.5 Score=33.30 Aligned_cols=47 Identities=23% Similarity=0.514 Sum_probs=34.6
Q ss_pred cccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccCC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~~ 110 (322)
+..|.+|...- ..-+.|-.|+..||..|+...+..- ...||.|+..-
T Consensus 22 ~~~C~IC~~~~--~~p~~~~~CgH~FC~~Ci~~~~~~~---~~~CP~Cr~~~ 68 (100)
T 3lrq_A 22 VFRCFICMEKL--RDARLCPHCSKLCCFSCIRRWLTEQ---RAQCPHCRAPL 68 (100)
T ss_dssp HTBCTTTCSBC--SSEEECTTTCCEEEHHHHHHHHHHT---CSBCTTTCCBC
T ss_pred CCCCccCCccc--cCccccCCCCChhhHHHHHHHHHHC---cCCCCCCCCcC
Confidence 57799999753 3455668899999999998654432 25899999753
No 129
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=57.45 E-value=5.9 Score=26.10 Aligned_cols=34 Identities=21% Similarity=0.603 Sum_probs=19.1
Q ss_pred eecccCCCccccccC-CCCCCCCCCCccCcccccCC
Q 020737 76 LCDKCDKGFHMKCLR-PIVVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 76 ~Cd~C~~~~H~~Cl~-Ppl~~~p~g~W~C~~C~~~~ 110 (322)
.|..|+..|...=-+ .+...+|+ +|.||.|...+
T Consensus 6 ~C~vCGyvyd~~~Gd~t~f~~lP~-dw~CP~Cg~~k 40 (46)
T 6rxn_A 6 VCNVCGYEYDPAEHDNVPFDQLPD-DWCCPVCGVSK 40 (46)
T ss_dssp EETTTCCEECGGGGTTCCGGGSCT-TCBCTTTCCBG
T ss_pred ECCCCCeEEeCCcCCCcchhhCCC-CCcCcCCCCcH
Confidence 466666555432111 22345654 69999998743
No 130
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=56.35 E-value=9.5 Score=36.47 Aligned_cols=30 Identities=7% Similarity=-0.034 Sum_probs=27.0
Q ss_pred CCCeEEEEeCCCceeeeecccCCCCceeEE
Q 020737 239 CPPLVVVYDSCEGFTVEADGQIKDMTFIAE 268 (322)
Q Consensus 239 ~~~l~v~~~~~kG~gv~a~~~I~~g~fv~E 268 (322)
...+++|.++.+|.||.|.++|+.|+.|..
T Consensus 4 ~~~i~~~~~~~~GR~l~Atr~i~~Ge~Il~ 33 (429)
T 3qwp_A 4 PLKVEKFATANRGNGLRAVTPLRPGELLFR 33 (429)
T ss_dssp CCSEEEEECSSSSEEEEESSCBCTTCEEEE
T ss_pred ccceeecccCCCCCeEEeCCCCCCCCEEEe
Confidence 356788889999999999999999998886
No 131
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=55.99 E-value=13 Score=36.58 Aligned_cols=35 Identities=23% Similarity=0.232 Sum_probs=29.5
Q ss_pred HhCCC-CCeEEEEeCCCceeeeecccCCCCceeEEe
Q 020737 235 KRGEC-PPLVVVYDSCEGFTVEADGQIKDMTFIAEY 269 (322)
Q Consensus 235 q~g~~-~~l~v~~~~~kG~gv~a~~~I~~g~fv~EY 269 (322)
.+|.. ..+++......|+||.|.++|+.|+.|+.=
T Consensus 87 ~~G~~~~~v~i~~~~~~GrGl~A~~dI~~ge~ll~I 122 (497)
T 3smt_A 87 ENGASVEGFEMVNFKEEGFGLRATRDIKAEELFLWV 122 (497)
T ss_dssp HTTCCCTTEEEEEETTTEEEEEESSCBCTTCEEEEE
T ss_pred HCCCCccceEEEEcCCCccEEEEcccCCCCCEEEEc
Confidence 46654 478888889999999999999999988764
No 132
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=55.42 E-value=1.2 Score=31.03 Aligned_cols=48 Identities=29% Similarity=0.693 Sum_probs=33.4
Q ss_pred ccccccccccccC----CCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 58 GDVGCEQCGSGER----AEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 58 ~~~~C~~C~~~~~----~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
++..|.+|...-. .+..+..-.|+-.||..|+...+..- -.||.|+..
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~----~~CP~Cr~~ 60 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA----NTCPTCRKK 60 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHC----SBCTTTCCB
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcC----CCCCCCCCc
Confidence 3567999987421 23445566899999999998554322 379999874
No 133
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=53.63 E-value=2.6 Score=33.80 Aligned_cols=44 Identities=20% Similarity=0.489 Sum_probs=30.0
Q ss_pred cccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
+..|.+|...-... +. -.|+..||..|+...+.. .-.||.|...
T Consensus 53 ~~~C~iC~~~~~~~--~~-~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~ 96 (138)
T 4ayc_A 53 ELQCIICSEYFIEA--VT-LNCAHSFCSYCINEWMKR----KIECPICRKD 96 (138)
T ss_dssp HSBCTTTCSBCSSE--EE-ETTSCEEEHHHHHHHTTT----CSBCTTTCCB
T ss_pred cCCCcccCcccCCc--eE-CCCCCCccHHHHHHHHHc----CCcCCCCCCc
Confidence 45799998753222 22 258889999998765443 3469999874
No 134
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=53.55 E-value=2 Score=32.46 Aligned_cols=48 Identities=25% Similarity=0.562 Sum_probs=36.8
Q ss_pred cccccccccccc----CCCCceeecccCCCccccccCCCCCCCCCCCccCccccc
Q 020737 58 GDVGCEQCGSGE----RAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSG 108 (322)
Q Consensus 58 ~~~~C~~C~~~~----~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~ 108 (322)
...+|.+|+... +....+.|..|....--.|+. -+..+|.-.||.|..
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyE---YErkeG~q~CpqCkt 66 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYE---YERREGTQNCPQCKT 66 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHH---HHHHTSCSSCTTTCC
T ss_pred CCCccccccCccccCCCCCEEEeeeccCChhhHHHHH---HHHhccCccccccCC
Confidence 357899999852 445778999998877778887 344567889999986
No 135
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.97 E-value=3.7 Score=29.27 Aligned_cols=49 Identities=27% Similarity=0.484 Sum_probs=32.1
Q ss_pred cccccccccccCCCCceeecccCCCccccccCCCCCC--CCCCCccCcccccCC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVR--VPIGTWLCPKCSGQR 110 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~--~p~g~W~C~~C~~~~ 110 (322)
...|.+|...-..- .+. .|...||..|+...+.. ...+...||.|...-
T Consensus 19 ~~~C~IC~~~~~~p-~~~--~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~ 69 (85)
T 2ecv_A 19 EVTCPICLELLTQP-LSL--DCGHSFCQACLTANHKKSMLDKGESSCPVCRISY 69 (85)
T ss_dssp CCCCTTTCSCCSSC-BCC--SSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSS
T ss_pred CCCCCCCCcccCCc-eeC--CCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCcc
Confidence 56799999764322 222 68889999998754322 122357899998753
No 136
>1vtp_A Na-propi, vacuolar targeting peptide; nicotiana alata proteinase inhibitors; NMR {Nicotiana alata} SCOP: j.36.2.1
Probab=50.91 E-value=0.82 Score=25.94 Aligned_cols=11 Identities=36% Similarity=0.797 Sum_probs=8.6
Q ss_pred eeEEeeeeehh
Q 020737 265 FIAEYIGDVDF 275 (322)
Q Consensus 265 fv~EY~Gev~~ 275 (322)
-|-||||||..
T Consensus 6 kv~eyv~eve~ 16 (26)
T 1vtp_A 6 KVDEYVGEVEN 16 (26)
T ss_dssp HHHHSHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 46799999954
No 137
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=50.45 E-value=4.2 Score=30.84 Aligned_cols=47 Identities=23% Similarity=0.458 Sum_probs=31.8
Q ss_pred cccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
...|.+|...-....+ -.|+..||..|+...+..- .+...||.|...
T Consensus 21 ~~~C~IC~~~~~~p~~---~~CgH~fC~~Ci~~~~~~~-~~~~~CP~Cr~~ 67 (112)
T 1jm7_A 21 ILECPICLELIKEPVS---TKCDHIFCKFCMLKLLNQK-KGPSQCPLCKND 67 (112)
T ss_dssp HTSCSSSCCCCSSCCB---CTTSCCCCSHHHHHHHHSS-SSSCCCTTTSCC
T ss_pred CCCCcccChhhcCeEE---CCCCCHHHHHHHHHHHHhC-CCCCCCcCCCCc
Confidence 4679999875322222 2689999999987554332 345789999874
No 138
>1flt_X FLT-1, VGR1, FMS-like tyrosine kinase 1; complex (growth factor-transferase), FLT-1 receptor, cystine glycoprotein; 1.70A {Homo sapiens} SCOP: b.1.1.4 PDB: 1qsv_A 1qsz_A 1qty_X 2xac_C 1rv6_X*
Probab=50.37 E-value=7.9 Score=29.28 Aligned_cols=29 Identities=17% Similarity=0.200 Sum_probs=26.2
Q ss_pred CeEEEEeCCCceeeeecccCCCCceeEEe
Q 020737 241 PLVVVYDSCEGFTVEADGQIKDMTFIAEY 269 (322)
Q Consensus 241 ~l~v~~~~~kG~gv~a~~~I~~g~fv~EY 269 (322)
...+.++.++||.+......-.|.++|+=
T Consensus 50 ~~~~~~D~k~Gf~I~~~~~~~~g~y~C~a 78 (95)
T 1flt_X 50 GKRIIWDSRKGFIISNATYKEIGLLTCEA 78 (95)
T ss_dssp SSSEEEETTTEEEESSCCGGGCEEEEEEE
T ss_pred CceeeECCCCCEEEeCCCcccCcEEEEEE
Confidence 45789999999999999999999999973
No 139
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=49.33 E-value=0.99 Score=30.66 Aligned_cols=47 Identities=28% Similarity=0.644 Sum_probs=32.2
Q ss_pred cccccccccccC----CCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 59 DVGCEQCGSGER----AEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 59 ~~~C~~C~~~~~----~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
+..|.+|...-. .+..+..-.|+..||..|+...+.. ...||.|...
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~ 53 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN----ANTCPTCRKK 53 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH----CSBCTTTCCB
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHc----CCCCCCCCcc
Confidence 467999987421 2344455689999999999754432 3479999864
No 140
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=49.21 E-value=2.4 Score=29.26 Aligned_cols=45 Identities=18% Similarity=0.414 Sum_probs=30.5
Q ss_pred cccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
...|.+|...-. .-...-.|+..||..|+...+.. ...||.|+..
T Consensus 5 ~~~C~IC~~~~~--~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~ 49 (68)
T 1chc_A 5 AERCPICLEDPS--NYSMALPCLHAFCYVCITRWIRQ----NPTCPLCKVP 49 (68)
T ss_dssp CCCCSSCCSCCC--SCEEETTTTEEESTTHHHHHHHH----SCSTTTTCCC
T ss_pred CCCCeeCCcccc--CCcEecCCCCeeHHHHHHHHHhC----cCcCcCCChh
Confidence 467999987532 22234468888999999754422 2479999864
No 141
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=48.69 E-value=3.9 Score=28.92 Aligned_cols=48 Identities=17% Similarity=0.528 Sum_probs=32.0
Q ss_pred ccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 58 GDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 58 ~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
++..|.+|...-. .-+.-..|...||..|+...+..- +...||.|+..
T Consensus 14 ~~~~C~IC~~~~~--~p~~~~~CgH~fC~~Ci~~~~~~~--~~~~CP~Cr~~ 61 (74)
T 2yur_A 14 DELLCLICKDIMT--DAVVIPCCGNSYCDECIRTALLES--DEHTCPTCHQN 61 (74)
T ss_dssp GGGSCSSSCCCCT--TCEECSSSCCEECTTHHHHHHHHS--SSSCCSSSCCS
T ss_pred CCCCCcCCChHHh--CCeEcCCCCCHHHHHHHHHHHHhc--CCCcCCCCCCc
Confidence 3578999987532 222233489999999997655421 24589999874
No 142
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=48.50 E-value=1.7 Score=34.06 Aligned_cols=46 Identities=17% Similarity=0.374 Sum_probs=31.3
Q ss_pred cccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccCC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~~ 110 (322)
...|.+|...-. ...+. .|+..||..|+...+. .+...||.|...-
T Consensus 52 ~~~C~IC~~~~~-~p~~~--~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~ 97 (124)
T 3fl2_A 52 TFQCICCQELVF-RPITT--VCQHNVCKDCLDRSFR---AQVFSCPACRYDL 97 (124)
T ss_dssp HTBCTTTSSBCS-SEEEC--TTSCEEEHHHHHHHHH---TTCCBCTTTCCBC
T ss_pred CCCCCcCChHHc-CcEEe--eCCCcccHHHHHHHHh---HCcCCCCCCCccC
Confidence 567999987532 22222 7899999999975543 2345899998743
No 143
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=46.69 E-value=9.7 Score=25.91 Aligned_cols=34 Identities=21% Similarity=0.549 Sum_probs=19.3
Q ss_pred eecccCCCccccc--------cCCCCCCCCCCCccCcccccCC
Q 020737 76 LCDKCDKGFHMKC--------LRPIVVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 76 ~Cd~C~~~~H~~C--------l~Ppl~~~p~g~W~C~~C~~~~ 110 (322)
.|..|+..|...= -+.+...+|+ +|.||.|...+
T Consensus 5 ~C~vCGyvYd~~~Gdp~~gi~pGt~fe~lP~-dw~CP~Cg~~K 46 (54)
T 4rxn_A 5 TCTVCGYIYDPEDGDPDDGVNPGTDFKDIPD-DWVCPLCGVGK 46 (54)
T ss_dssp EETTTCCEECTTTCBGGGTBCTTCCGGGSCT-TCBCTTTCCBG
T ss_pred ECCCCCeEECCCcCCcccCcCCCCChhHCCC-CCcCcCCCCcH
Confidence 4666665554321 1222334553 69999998753
No 144
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=46.66 E-value=5.9 Score=27.98 Aligned_cols=47 Identities=11% Similarity=0.186 Sum_probs=32.5
Q ss_pred ccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccCC
Q 020737 58 GDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 58 ~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~~ 110 (322)
++..|.+|...-. +..+ -.|+..|+..|+...+. .+...||.|...-
T Consensus 7 ~~~~C~IC~~~~~-~Pv~--~~CgH~fc~~Ci~~~~~---~~~~~CP~C~~~~ 53 (78)
T 1t1h_A 7 EYFRCPISLELMK-DPVI--VSTGQTYERSSIQKWLD---AGHKTCPKSQETL 53 (78)
T ss_dssp SSSSCTTTSCCCS-SEEE--ETTTEEEEHHHHHHHHT---TTCCBCTTTCCBC
T ss_pred ccCCCCCcccccc-CCEE--cCCCCeecHHHHHHHHH---HCcCCCCCCcCCC
Confidence 3678999987532 2222 26998999999876554 3467899998753
No 145
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.56 E-value=3.3 Score=29.01 Aligned_cols=46 Identities=20% Similarity=0.341 Sum_probs=31.1
Q ss_pred ccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 58 GDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 58 ~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
+...|.+|...-. .-+.-..|...||..|+...+.. .-.||.|+..
T Consensus 14 ~~~~C~IC~~~~~--~p~~~~~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~ 59 (72)
T 2djb_A 14 PYILCSICKGYLI--DATTITECLHTFCKSCIVRHFYY----SNRCPKCNIV 59 (72)
T ss_dssp GGGSCTTTSSCCS--SCEECSSSCCEECHHHHHHHHHH----CSSCTTTCCC
T ss_pred CCCCCCCCChHHH--CcCEECCCCCHHHHHHHHHHHHc----CCcCCCcCcc
Confidence 3577999987532 23333578889999998754422 3479999874
No 146
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=46.40 E-value=3.6 Score=29.30 Aligned_cols=49 Identities=20% Similarity=0.393 Sum_probs=32.1
Q ss_pred cccccccccccCCCCceeecccCCCccccccCCCCCCC--CCCCccCcccccCC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRV--PIGTWLCPKCSGQR 110 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~--p~g~W~C~~C~~~~ 110 (322)
...|.+|...-... + . -.|...||..|+...+... ..+...||.|...-
T Consensus 19 ~~~C~IC~~~~~~p-~-~-~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~ 69 (85)
T 2ecw_A 19 EVTCPICLELLKEP-V-S-ADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPY 69 (85)
T ss_dssp TTSCTTTCSCCSSC-E-E-CTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCC
T ss_pred CCCCcCCChhhCcc-e-e-CCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcC
Confidence 56799998753222 2 2 2588899999987543321 13468999998753
No 147
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=44.16 E-value=4.7 Score=27.52 Aligned_cols=49 Identities=24% Similarity=0.592 Sum_probs=31.4
Q ss_pred ccccccccc-cc-CCCCceeecccCCCccccccCCCCCCCCCCCccCcccccCC
Q 020737 59 DVGCEQCGS-GE-RAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 59 ~~~C~~C~~-~~-~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~~ 110 (322)
+..|.+|.. .- ++...+.-..|+..||..|+...+. .+...||.|...-
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~ 53 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFV---RGAGNCPECGTPL 53 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHH---TTSSSCTTTCCCC
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHH---cCCCcCCCCCCcc
Confidence 567999987 22 2222112247999999999875433 2346899998753
No 148
>1kvd_B SMK toxin; halotolerant yeast; 1.80A {Pichia farinosa} SCOP: d.70.1.2 PDB: 1kve_B
Probab=43.41 E-value=10 Score=26.36 Aligned_cols=15 Identities=33% Similarity=0.215 Sum_probs=13.8
Q ss_pred eeeeecccCCCCcee
Q 020737 252 FTVEADGQIKDMTFI 266 (322)
Q Consensus 252 ~gv~a~~~I~~g~fv 266 (322)
|||-|++.|.+||.-
T Consensus 7 wgvgadeaidkgtps 21 (77)
T 1kvd_B 7 WGVGADEAIDKGTPS 21 (77)
T ss_dssp EEEEEESSCCCCCCC
T ss_pred eeccchhhhhcCCCC
Confidence 999999999999863
No 149
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=40.01 E-value=16 Score=28.02 Aligned_cols=44 Identities=20% Similarity=0.453 Sum_probs=29.5
Q ss_pred cccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccCC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~~ 110 (322)
...|.+|...-.. ..+ -..|+..|+..|+.-.+. ..||.|...-
T Consensus 22 ~~~C~IC~~~~~~-pv~-~~~CgH~fC~~Ci~~~~~------~~CP~Cr~~~ 65 (117)
T 1jm7_B 22 LLRCSRCTNILRE-PVC-LGGCEHIFCSNCVSDCIG------TGCPVCYTPA 65 (117)
T ss_dssp TTSCSSSCSCCSS-CBC-CCSSSCCBCTTTGGGGTT------TBCSSSCCBC
T ss_pred CCCCCCCChHhhC-ccE-eCCCCCHHHHHHHHHHhc------CCCcCCCCcC
Confidence 5779999875322 222 126888899999875443 4799998753
No 150
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=39.84 E-value=14 Score=24.07 Aligned_cols=30 Identities=23% Similarity=0.463 Sum_probs=25.1
Q ss_pred cccccccccccCCCCceeecccCCCccccccC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLR 90 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~ 90 (322)
..+|..|++.-. .-+.|..|....|..|..
T Consensus 14 pt~C~~C~~~l~--qG~~C~~C~~~~H~~C~~ 43 (52)
T 1faq_A 14 LAFCDICQKFLL--NGFRCQTCGYKFHEHCST 43 (52)
T ss_dssp CEECTTSSSEEC--SEEECTTTTCCBCSTTSS
T ss_pred CcCCCCcccccc--cCCEeCCCCCeEChhHHh
Confidence 477999987543 677899999999999987
No 151
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=39.32 E-value=12 Score=26.54 Aligned_cols=23 Identities=35% Similarity=0.728 Sum_probs=16.3
Q ss_pred cccccccccccccccCCCCceeecccC
Q 020737 55 GDYGDVGCEQCGSGERAEELLLCDKCD 81 (322)
Q Consensus 55 ~~~~~~~C~~C~~~~~~~~ll~Cd~C~ 81 (322)
++.+..+|.||.. +..+.|-+|+
T Consensus 4 ~~ee~pWC~ICne----DAtlrC~gCd 26 (67)
T 2d8v_A 4 GSSGLPWCCICNE----DATLRCAGCD 26 (67)
T ss_dssp SCCCCSSCTTTCS----CCCEEETTTT
T ss_pred cCcCCCeeEEeCC----CCeEEecCCC
Confidence 3445688999987 3567788884
No 152
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=38.89 E-value=2.2 Score=33.26 Aligned_cols=48 Identities=29% Similarity=0.697 Sum_probs=34.1
Q ss_pred ccccccccccccC----CCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 58 GDVGCEQCGSGER----AEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 58 ~~~~C~~C~~~~~----~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
+...|.+|...-. .+..+..-.|+..||..|+...+.. ...||.|+..
T Consensus 71 ~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~ 122 (133)
T 4ap4_A 71 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN----ANTCPTCRKK 122 (133)
T ss_dssp SSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHH----CSBCTTTCCB
T ss_pred CCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHc----CCCCCCCCCc
Confidence 3567999986421 2334456689999999999876643 3589999874
No 153
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=38.11 E-value=8 Score=29.31 Aligned_cols=45 Identities=22% Similarity=0.442 Sum_probs=31.8
Q ss_pred cccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
+..|.+|...- ..-+....|+..||..|+...+.. .-.||.|...
T Consensus 15 ~~~C~IC~~~~--~~p~~~~~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~ 59 (108)
T 2ckl_A 15 HLMCVLCGGYF--IDATTIIECLHSFCKTCIVRYLET----SKYCPICDVQ 59 (108)
T ss_dssp GTBCTTTSSBC--SSEEEETTTCCEEEHHHHHHHHTS----CSBCTTTCCB
T ss_pred cCCCccCChHH--hCcCEeCCCCChhhHHHHHHHHHh----CCcCcCCCcc
Confidence 57799998753 223344579999999998755443 2579999874
No 154
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=37.73 E-value=22 Score=34.30 Aligned_cols=52 Identities=12% Similarity=0.155 Sum_probs=34.2
Q ss_pred cChhhhHHHHHHHH-HHHhCCC--CCeEEEEe-CCCceeeeecccCCCCceeEEee
Q 020737 219 LSKEDTETLEQCRA-MCKRGEC--PPLVVVYD-SCEGFTVEADGQIKDMTFIAEYI 270 (322)
Q Consensus 219 ~~~ed~~~~~~~~r-~~q~g~~--~~l~v~~~-~~kG~gv~a~~~I~~g~fv~EY~ 270 (322)
...+|.+.++.|.+ +..+|.. +.+.|... ...|+||.|.++|++|+.|+.==
T Consensus 14 ~~~~~~~~~~~ll~W~~~~G~~~~~~v~i~~~~~~~G~Gv~A~~dI~~ge~ll~IP 69 (449)
T 3qxy_A 14 VDGGDLDPVACFLSWCRRVGLELSPKVAVSRQGTVAGYGMVARESVQAGELLFVVP 69 (449)
T ss_dssp -----CHHHHHHHHHHHHHTCEECTTEEEESSSCSSSSEEEESSCBCTTCEEEEEE
T ss_pred cCCCCcHHHHHHHHHHHHCCCeeCCceEEEecCCCceEEEEECCCCCCCCEEEEeC
Confidence 44556666666644 3346765 46787764 47899999999999999887643
No 155
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=37.08 E-value=31 Score=32.87 Aligned_cols=36 Identities=19% Similarity=0.112 Sum_probs=25.7
Q ss_pred HhCCCC-CeEEEEe-CCCceeeeecccCCCCceeEEee
Q 020737 235 KRGECP-PLVVVYD-SCEGFTVEADGQIKDMTFIAEYI 270 (322)
Q Consensus 235 q~g~~~-~l~v~~~-~~kG~gv~a~~~I~~g~fv~EY~ 270 (322)
++|... ++.|... ...|+||.|.++|++|+.|++==
T Consensus 15 ~~G~~~~~~~v~~~~~~~GrGl~A~~~I~~ge~ll~IP 52 (440)
T 2h21_A 15 EEGVITAKTPVKASVVTEGLGLVALKDISRNDVILQVP 52 (440)
T ss_dssp HTTSSCTTCSEEEEEETTEEEEEESSCBCTTEEEEEEE
T ss_pred HCCCCcCCceeeeccCCCCCEEEEcccCCCCCEEEEeC
Confidence 467664 3444433 35799999999999999887643
No 156
>1n0z_A ZNF265; zinc finger, RNA splicing, transcription; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=35.81 E-value=20 Score=23.24 Aligned_cols=14 Identities=57% Similarity=1.495 Sum_probs=10.8
Q ss_pred CCCCCCccCc--cccc
Q 020737 95 RVPIGTWLCP--KCSG 108 (322)
Q Consensus 95 ~~p~g~W~C~--~C~~ 108 (322)
....|+|.|+ .|..
T Consensus 9 ~~~~GDW~C~~~~C~~ 24 (45)
T 1n0z_A 9 RVSDGDWICPDKKCGN 24 (45)
T ss_dssp SSCSSSCBCSSTTTCC
T ss_pred CCCCCCcCCCCCCCCC
Confidence 3457899999 7875
No 157
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=34.76 E-value=7.3 Score=28.97 Aligned_cols=46 Identities=17% Similarity=0.436 Sum_probs=31.6
Q ss_pred cccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccCC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~~ 110 (322)
...|.+|...-.. -+..-.|+..||..|+...+.. .-.||.|...-
T Consensus 22 ~~~C~IC~~~~~~--p~~~~~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~~ 67 (99)
T 2y43_A 22 LLRCGICFEYFNI--AMIIPQCSHNYCSLCIRKFLSY----KTQCPTCCVTV 67 (99)
T ss_dssp HTBCTTTCSBCSS--EEECTTTCCEEEHHHHHHHHTT----CCBCTTTCCBC
T ss_pred CCCcccCChhhCC--cCEECCCCCHhhHHHHHHHHHC----CCCCCCCCCcC
Confidence 5679999875322 2223468999999998755442 24899998753
No 158
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=34.53 E-value=4.3 Score=29.74 Aligned_cols=48 Identities=17% Similarity=0.531 Sum_probs=31.2
Q ss_pred ccccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 58 GDVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 58 ~~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
++..|.+|...-. +.. .-..|+..|+..|+...+.. .+...||.|...
T Consensus 12 ~~~~C~IC~~~~~-~p~-~~~~CgH~fC~~Ci~~~~~~--~~~~~CP~Cr~~ 59 (92)
T 3ztg_A 12 DELLCLICKDIMT-DAV-VIPCCGNSYCDECIRTALLE--SDEHTCPTCHQN 59 (92)
T ss_dssp TTTEETTTTEECS-SCE-ECTTTCCEECHHHHHHHHHH--CTTCCCTTTCCS
T ss_pred cCCCCCCCChhhc-Cce-ECCCCCCHHHHHHHHHHHHh--cCCCcCcCCCCc
Confidence 3578999997532 222 22338888999998754432 134689999975
No 159
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=32.70 E-value=15 Score=27.32 Aligned_cols=32 Identities=28% Similarity=0.601 Sum_probs=25.6
Q ss_pred ccccccccccCCCCceeecccCCCccccccCCC
Q 020737 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLRPI 92 (322)
Q Consensus 60 ~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Pp 92 (322)
..|.+|+.. ..+..-.|..|+...|..|...|
T Consensus 48 ~~C~~C~~~-~~~~~Y~C~~C~f~lH~~Ca~~p 79 (89)
T 1v5n_A 48 YTCDKCEEE-GTIWSYHCDECDFDLHAKCALNE 79 (89)
T ss_dssp CCCTTTSCC-CCSCEEECTTTCCCCCHHHHHCS
T ss_pred eEeCCCCCc-CCCcEEEcCCCCCeEcHHhcCCC
Confidence 579999985 34556689999999999998644
No 160
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=32.03 E-value=16 Score=24.19 Aligned_cols=29 Identities=24% Similarity=0.564 Sum_probs=24.2
Q ss_pred ccccccccccCCCCceeecccCCCccccccC
Q 020737 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCLR 90 (322)
Q Consensus 60 ~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~ 90 (322)
..|..|++.-..| +.|..|..-.|..|..
T Consensus 15 t~C~~C~k~i~~G--~kC~~Ck~~cH~kC~~ 43 (49)
T 1kbe_A 15 QVCNVCQKSMIFG--VKCKHCRLKCHNKCTK 43 (49)
T ss_dssp CCCSSSCCSSCCE--EEETTTTEEESSSCTT
T ss_pred cCccccCceeECc--CCCCCCCCccchhhcC
Confidence 5799999876544 6799999999999976
No 161
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=30.59 E-value=18 Score=21.25 Aligned_cols=28 Identities=32% Similarity=0.638 Sum_probs=18.4
Q ss_pred ccccccccccCCCCceeecccCCCcccccc
Q 020737 60 VGCEQCGSGERAEELLLCDKCDKGFHMKCL 89 (322)
Q Consensus 60 ~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl 89 (322)
..|..|++..-..+.+..+ ++.||-.|.
T Consensus 4 ~~C~~C~k~Vy~~Ek~~~~--g~~~Hk~CF 31 (31)
T 1zfo_A 4 PNCARCGKIVYPTEKVNCL--DKFWHKACF 31 (31)
T ss_dssp CBCSSSCSBCCGGGCCCSS--SSCCCGGGC
T ss_pred CcCCccCCEEecceeEEEC--CeEecccCC
Confidence 4688888876555555554 367888774
No 162
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=30.19 E-value=8.1 Score=31.53 Aligned_cols=46 Identities=17% Similarity=0.404 Sum_probs=31.1
Q ss_pred cccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccCC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~~ 110 (322)
...|.+|...-. ...+ -.|+-.|+..|+...+.. +...||.|...-
T Consensus 78 ~~~C~IC~~~~~-~pv~--~~CgH~fC~~Ci~~~~~~---~~~~CP~Cr~~~ 123 (150)
T 1z6u_A 78 SFMCVCCQELVY-QPVT--TECFHNVCKDCLQRSFKA---QVFSCPACRHDL 123 (150)
T ss_dssp HTBCTTTSSBCS-SEEE--CTTSCEEEHHHHHHHHHT---TCCBCTTTCCBC
T ss_pred CCEeecCChhhc-CCEE--cCCCCchhHHHHHHHHHh---CCCcCCCCCccC
Confidence 567999987532 2222 378889999998755442 345799998753
No 163
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=30.14 E-value=21 Score=25.62 Aligned_cols=33 Identities=21% Similarity=0.518 Sum_probs=26.3
Q ss_pred cccccccccccC--CCCceeecccCCCccccccCC
Q 020737 59 DVGCEQCGSGER--AEELLLCDKCDKGFHMKCLRP 91 (322)
Q Consensus 59 ~~~C~~C~~~~~--~~~ll~Cd~C~~~~H~~Cl~P 91 (322)
..+|..|.+.-. ...-+.|..|....|-.|+..
T Consensus 34 pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 68 (77)
T 2enn_A 34 PTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDK 68 (77)
T ss_dssp CEECSSSCCEECCTTCCEEECSSSCCEEESGGGSS
T ss_pred CcCccccChhhccccccccCcCCCCCcCCHhHHhh
Confidence 578999988533 246678999999999999873
No 164
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=29.69 E-value=7.5 Score=27.01 Aligned_cols=52 Identities=21% Similarity=0.477 Sum_probs=31.0
Q ss_pred cccccccccccc-CCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 58 GDVGCEQCGSGE-RAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 58 ~~~~C~~C~~~~-~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
+...|.+|.+.. .+|---.|..|..-|-.-|-+-.-.....-.|.|..|.++
T Consensus 8 d~~~C~iC~KTKFADG~Gh~C~yCk~r~CaRCGg~v~lr~~k~~WvC~lC~k~ 60 (62)
T 2a20_A 8 DAPTCGICHKTKFADGCGHNCSYCQTKFCARCGGRVSLRSNKVMWVCNLCRKQ 60 (62)
T ss_dssp CCCCCSSSSCSCCCSSCCEEBTTTCCEECTTSEEEEESSTTCEEEEEHHHHHH
T ss_pred CcchhhhhccceeccCCCccccccCCeeecccCCEeeecCCeEEEEehhhhhc
Confidence 357899999864 2233335777777666666542111122236999999864
No 165
>1pju_A Wound-induced proteinase inhibitor II; hydrolase; 2.15A {Solanum lycopersicum} SCOP: g.69.1.1 g.69.1.1 PDB: 1oyv_I
Probab=29.44 E-value=20 Score=28.41 Aligned_cols=20 Identities=35% Similarity=0.469 Sum_probs=14.0
Q ss_pred CCceeeeecccCCCCceeEEeeeeeh
Q 020737 249 CEGFTVEADGQIKDMTFIAEYIGDVD 274 (322)
Q Consensus 249 ~kG~gv~a~~~I~~g~fv~EY~Gev~ 274 (322)
.||-.+ +-.+|||||| ||-+
T Consensus 94 ~KGC~y----f~~DGtfiCe--Ges~ 113 (123)
T 1pju_A 94 YKGCYY----FGKDGKFVCE--GESD 113 (123)
T ss_dssp BTTCEE----ECTTSCEEEE--CCBC
T ss_pred ccCceE----EcCCCcEEec--CCCC
Confidence 455444 4568999999 8864
No 166
>1fyb_A Na-propi, proteinase inhibitor; two-domain protein, hydrolase inhibitor; NMR {Nicotiana alata} SCOP: g.69.1.1 g.69.1.1 PDB: 2jyy_A 1ytp_A
Probab=29.15 E-value=18 Score=28.07 Aligned_cols=20 Identities=35% Similarity=0.569 Sum_probs=13.6
Q ss_pred CCceeeeecccCCCCceeEEeeeeeh
Q 020737 249 CEGFTVEADGQIKDMTFIAEYIGDVD 274 (322)
Q Consensus 249 ~kG~gv~a~~~I~~g~fv~EY~Gev~ 274 (322)
.||-.+.- ..|||||| ||-+
T Consensus 69 ~KGC~yfs----aDGtfiCe--GEsd 88 (111)
T 1fyb_A 69 TKGCKYFS----DDGTFVCE--GESD 88 (111)
T ss_dssp CTTSEEEE----TTTEEEEE--CCCC
T ss_pred cccceEEC----CCCcEEec--CCCC
Confidence 35544443 45999999 9885
No 167
>2k0a_A PRE-mRNA-splicing factor RDS3; zinc finger, topological knot, mRNA processing, nucleus, spliceosome, RNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=28.58 E-value=10 Score=29.30 Aligned_cols=50 Identities=20% Similarity=0.416 Sum_probs=32.5
Q ss_pred cccccccccccCCCCce-eecccCC-CccccccCCCCCCCCCCCccCccccc
Q 020737 59 DVGCEQCGSGERAEELL-LCDKCDK-GFHMKCLRPIVVRVPIGTWLCPKCSG 108 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll-~Cd~C~~-~~H~~Cl~Ppl~~~p~g~W~C~~C~~ 108 (322)
+..|.+|..-..+..++ .||.|.. .+.-.|+-=....--..-+||.+|..
T Consensus 29 dGkC~iCDs~Vrp~~~VrICdeCs~G~~~~rCIiCg~~~g~~dAYYC~eC~~ 80 (109)
T 2k0a_A 29 DGKCPICDSYVRPKRKVRVCENCSFGKQAKNCIICNLNVGVNDAFYCWECCR 80 (109)
T ss_dssp TTCCTTTCCCCCCCEECEEEHHHHTSSTTSBCTTTSSSBCCEECEECHHHHH
T ss_pred CCcccccCCccCCcceEEECCcCCCCCcCCceEEcCCCCCcccceehHhhhh
Confidence 56788888876666665 7999987 45566764211111122699999975
No 168
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=28.44 E-value=27 Score=24.85 Aligned_cols=31 Identities=26% Similarity=0.592 Sum_probs=25.7
Q ss_pred cccccccccccCCCCceeecccCCCccccccC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLR 90 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~ 90 (322)
..+|..|+.-- ...-+.|..|....|..|..
T Consensus 35 pt~C~~C~~~l-~~qG~kC~~C~~~cHkkC~~ 65 (72)
T 2fnf_X 35 PGWCDLCGREV-LRQALRCANCKFTCHSECRS 65 (72)
T ss_dssp CCBCTTTSSBC-SSCCEECTTSSCEECTGGGG
T ss_pred CcchhhhhHHH-HhCcCccCCCCCeechhhhc
Confidence 47799998765 45667899999999999976
No 169
>1ce3_A Protein (API); protease inhibitor, circular permutation; NMR {Nicotiana alata} SCOP: g.69.1.1
Probab=27.37 E-value=21 Score=24.28 Aligned_cols=8 Identities=50% Similarity=0.767 Sum_probs=5.5
Q ss_pred CCCceeEE
Q 020737 261 KDMTFIAE 268 (322)
Q Consensus 261 ~~g~fv~E 268 (322)
..||||||
T Consensus 44 ~dGtfiCe 51 (54)
T 1ce3_A 44 DDGTFVCE 51 (54)
T ss_dssp SSSCEEEC
T ss_pred CCCcEEeC
Confidence 45777776
No 170
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=26.31 E-value=8.8 Score=36.66 Aligned_cols=45 Identities=18% Similarity=0.367 Sum_probs=30.6
Q ss_pred cccccccccccCCCCceeecccCCCccccccCCCCCCCCCCCccCcccccC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQ 109 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~ 109 (322)
...|.+|.... .-...-.|+..||..|+...+.. +.-.||.|+..
T Consensus 332 ~~~C~ICle~~---~~pv~lpCGH~FC~~Ci~~wl~~---~~~~CP~CR~~ 376 (389)
T 2y1n_A 332 FQLCKICAEND---KDVKIEPCGHLMCTSCLTSWQES---EGQGCPFCRCE 376 (389)
T ss_dssp SSBCTTTSSSB---CCEEEETTCCEECHHHHHHHHHH---TCSBCTTTCCB
T ss_pred CCCCCccCcCC---CCeEEeCCCChhhHHHHHHHHhc---CCCCCCCCCCc
Confidence 46799998752 22334578888999998654331 23479999874
No 171
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=24.75 E-value=42 Score=23.02 Aligned_cols=32 Identities=34% Similarity=0.696 Sum_probs=25.4
Q ss_pred cccccccccccC--CCCceeecccCCCccccccC
Q 020737 59 DVGCEQCGSGER--AEELLLCDKCDKGFHMKCLR 90 (322)
Q Consensus 59 ~~~C~~C~~~~~--~~~ll~Cd~C~~~~H~~Cl~ 90 (322)
..+|..|+..-. ...-+.|..|....|-.|..
T Consensus 23 pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~ 56 (65)
T 2enz_A 23 PTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQT 56 (65)
T ss_dssp CCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTT
T ss_pred CcCchhcChhheecCCcccccCCCCCccCHhHHh
Confidence 477999987542 24667899999999999987
No 172
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.71 E-value=36 Score=24.66 Aligned_cols=32 Identities=22% Similarity=0.541 Sum_probs=25.7
Q ss_pred cccccccccccC--CCCceeecccCCCccccccC
Q 020737 59 DVGCEQCGSGER--AEELLLCDKCDKGFHMKCLR 90 (322)
Q Consensus 59 ~~~C~~C~~~~~--~~~ll~Cd~C~~~~H~~Cl~ 90 (322)
..+|..|+..-. ...-+.|..|....|-.|..
T Consensus 28 pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~ 61 (83)
T 2yuu_A 28 PTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCID 61 (83)
T ss_dssp CCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGG
T ss_pred CcChhhcChhhccccccccccCCcCCeeChhhhh
Confidence 478999987543 24667899999999999987
No 173
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=24.27 E-value=26 Score=22.47 Aligned_cols=32 Identities=31% Similarity=0.672 Sum_probs=25.2
Q ss_pred cccccccccccC--CCCceeecccCCCccccccC
Q 020737 59 DVGCEQCGSGER--AEELLLCDKCDKGFHMKCLR 90 (322)
Q Consensus 59 ~~~C~~C~~~~~--~~~ll~Cd~C~~~~H~~Cl~ 90 (322)
..+|..|++.-. ...-+.|..|....|..|..
T Consensus 11 pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~ 44 (50)
T 1ptq_A 11 PTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCRE 44 (50)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHT
T ss_pred CCCcCCCCceeeccCCccCEeCCCCCeECHHHhh
Confidence 467999987542 24667899999999999976
No 174
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=23.41 E-value=29 Score=28.55 Aligned_cols=51 Identities=20% Similarity=0.417 Sum_probs=35.0
Q ss_pred ccccccccccccc--CCCCceeecccCCCccccccCCCCCCCCCCCccCcccccCC
Q 020737 57 YGDVGCEQCGSGE--RAEELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 57 ~~~~~C~~C~~~~--~~~~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~~ 110 (322)
+++..|.+|..+- -.+.-..|..|..-+-..|-. ...+++.|.|.-|....
T Consensus 66 ~~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~---~~~~~~~W~C~vC~k~r 118 (153)
T 2zet_C 66 LNETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSH---AHPEEQGWLCDPCHLAR 118 (153)
T ss_dssp GGGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEE---CCSSSSSCEEHHHHHHH
T ss_pred CCCccchhhcCccccccCCCCcCCCCCchhhccccc---ccCCCCcEeeHHHHHHH
Confidence 4578899999852 223455788887777667763 22345689999998753
No 175
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=23.02 E-value=40 Score=28.89 Aligned_cols=27 Identities=22% Similarity=0.405 Sum_probs=17.9
Q ss_pred CceeecccCCCccccccCCCCCCCCCCCccCcccccCC
Q 020737 73 ELLLCDKCDKGFHMKCLRPIVVRVPIGTWLCPKCSGQR 110 (322)
Q Consensus 73 ~ll~Cd~C~~~~H~~Cl~Ppl~~~p~g~W~C~~C~~~~ 110 (322)
....|..|+..|-. .+ | |.||.|...+
T Consensus 170 ~~~~C~~CG~i~~g---~~-----p---~~CP~C~~~k 196 (202)
T 1yuz_A 170 KFHLCPICGYIHKG---ED-----F---EKCPICFRPK 196 (202)
T ss_dssp CEEECSSSCCEEES---SC-----C---SBCTTTCCBG
T ss_pred cEEEECCCCCEEcC---cC-----C---CCCCCCCCCh
Confidence 45578888766432 22 2 9999998754
No 176
>2hfr_A Fowlicidin-3, cathelicidin; alpha helix, antimicrobial protein; NMR {Synthetic}
Probab=22.22 E-value=25 Score=19.92 Aligned_cols=11 Identities=27% Similarity=0.640 Sum_probs=7.7
Q ss_pred hhcCCCCCCCc
Q 020737 159 RRLLPFTPSED 169 (322)
Q Consensus 159 r~~lp~vp~~d 169 (322)
++|||.||..-
T Consensus 1 kRF~P~vpvai 11 (27)
T 2hfr_A 1 KRFWPLVPVAI 11 (27)
T ss_dssp CCSCSSSSSHH
T ss_pred CCccccCcceE
Confidence 46899987543
No 177
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.20 E-value=44 Score=24.34 Aligned_cols=32 Identities=31% Similarity=0.711 Sum_probs=25.5
Q ss_pred cccccccccccCC--CCceeecccCCCccccccC
Q 020737 59 DVGCEQCGSGERA--EELLLCDKCDKGFHMKCLR 90 (322)
Q Consensus 59 ~~~C~~C~~~~~~--~~ll~Cd~C~~~~H~~Cl~ 90 (322)
..+|..|+..-.. ..-+.|..|....|-.|..
T Consensus 28 pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~ 61 (85)
T 2eli_A 28 PTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVI 61 (85)
T ss_dssp CCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTT
T ss_pred CcCCcccCccccccccCCCcCCCcCCccCHhHHh
Confidence 4779999875421 3667899999999999987
No 178
>4b2v_A S64; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=21.97 E-value=41 Score=19.57 Aligned_cols=12 Identities=33% Similarity=1.215 Sum_probs=9.7
Q ss_pred CCCccCcccccC
Q 020737 98 IGTWLCPKCSGQ 109 (322)
Q Consensus 98 ~g~W~C~~C~~~ 109 (322)
-|+|.|-.|+..
T Consensus 16 mgdwccgrcirn 27 (32)
T 4b2v_A 16 MGDWCCGRCIRN 27 (32)
T ss_dssp TCCCCSSEEETT
T ss_pred hcchhhhHHHHh
Confidence 479999999853
No 179
>4sgb_I Potato inhibitor, PCI-1; complex(serine proteinase-inhibitor); 2.10A {Streptomyces griseus} SCOP: g.69.1.1 PDB: 2jzm_A 1tih_A 1qh2_B
Probab=21.85 E-value=35 Score=22.62 Aligned_cols=12 Identities=42% Similarity=0.700 Sum_probs=9.0
Q ss_pred CCCceeEEeeeeeh
Q 020737 261 KDMTFIAEYIGDVD 274 (322)
Q Consensus 261 ~~g~fv~EY~Gev~ 274 (322)
..|+|||| ||-+
T Consensus 18 ~~GtfiCe--Gesd 29 (51)
T 4sgb_I 18 ANGAFICE--GQSD 29 (51)
T ss_dssp TTCCEEEE--CCBC
T ss_pred CCCCEEec--cccC
Confidence 46999998 6653
No 180
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=20.76 E-value=37 Score=24.07 Aligned_cols=26 Identities=12% Similarity=0.281 Sum_probs=13.4
Q ss_pred ccccccccccc---CCCCceeecccCCCc
Q 020737 59 DVGCEQCGSGE---RAEELLLCDKCDKGF 84 (322)
Q Consensus 59 ~~~C~~C~~~~---~~~~ll~Cd~C~~~~ 84 (322)
...|.+|+..= .....+.|..|..+|
T Consensus 8 iL~CP~ck~~L~~~~~~~~LiC~~cg~~Y 36 (69)
T 2pk7_A 8 ILACPICKGPLKLSADKTELISKGAGLAY 36 (69)
T ss_dssp TCCCTTTCCCCEECTTSSEEEETTTTEEE
T ss_pred heeCCCCCCcCeEeCCCCEEEcCCCCcEe
Confidence 35577776531 123344566665555
No 181
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=20.37 E-value=26 Score=23.81 Aligned_cols=31 Identities=26% Similarity=0.592 Sum_probs=25.5
Q ss_pred cccccccccccCCCCceeecccCCCccccccC
Q 020737 59 DVGCEQCGSGERAEELLLCDKCDKGFHMKCLR 90 (322)
Q Consensus 59 ~~~C~~C~~~~~~~~ll~Cd~C~~~~H~~Cl~ 90 (322)
..+|..|+.-- ....+.|..|....|..|..
T Consensus 22 pt~C~~C~~~i-~kqg~kC~~C~~~cH~kC~~ 52 (59)
T 1rfh_A 22 PGWCDLCGREV-LRQALRCANCKFTCHSECRS 52 (59)
T ss_dssp CEECTTTCSEE-CSCCEECTTTSCEECHHHHT
T ss_pred CeEchhcchhh-hhCccEeCCCCCeEehhhhh
Confidence 46799998755 45667899999999999976
No 182
>2l7p_A Histone-lysine N-methyltransferase ASHH2; CW-domain; NMR {Arabidopsis thaliana}
Probab=20.34 E-value=20 Score=27.53 Aligned_cols=32 Identities=19% Similarity=0.486 Sum_probs=19.9
Q ss_pred CCceeecccCCCccccc-cCCCCCCCCCCCccCcc
Q 020737 72 EELLLCDKCDKGFHMKC-LRPIVVRVPIGTWLCPK 105 (322)
Q Consensus 72 ~~ll~Cd~C~~~~H~~C-l~Ppl~~~p~g~W~C~~ 105 (322)
..-++||.|.+|-.+.= +... ..+| ..|+|..
T Consensus 26 ~~WVQCD~C~KWRrLP~~~~~~-~~~p-d~W~C~m 58 (100)
T 2l7p_A 26 SAWVRCDDCFKWRRIPASVVGS-IDES-SRWICMN 58 (100)
T ss_dssp SEEEECTTTCCEEEECHHHHTT-STTS-SCCCGGG
T ss_pred CeEEeeCCCCccccCChhHccc-cCCC-CCceeCC
Confidence 56789999999876641 1111 1133 6899965
No 183
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=20.20 E-value=35 Score=24.28 Aligned_cols=26 Identities=27% Similarity=0.491 Sum_probs=13.9
Q ss_pred ccccccccccc---CCCCceeecccCCCc
Q 020737 59 DVGCEQCGSGE---RAEELLLCDKCDKGF 84 (322)
Q Consensus 59 ~~~C~~C~~~~---~~~~ll~Cd~C~~~~ 84 (322)
...|.+|+..= .....+.|..|..+|
T Consensus 8 iL~CP~ck~~L~~~~~~~~LiC~~cg~~Y 36 (70)
T 2js4_A 8 ILVCPVCKGRLEFQRAQAELVCNADRLAF 36 (70)
T ss_dssp CCBCTTTCCBEEEETTTTEEEETTTTEEE
T ss_pred heECCCCCCcCEEeCCCCEEEcCCCCcee
Confidence 35677777631 223344566666655
No 184
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=20.14 E-value=33 Score=24.26 Aligned_cols=26 Identities=19% Similarity=0.450 Sum_probs=14.1
Q ss_pred ccccccccccc---CCCCceeecccCCCc
Q 020737 59 DVGCEQCGSGE---RAEELLLCDKCDKGF 84 (322)
Q Consensus 59 ~~~C~~C~~~~---~~~~ll~Cd~C~~~~ 84 (322)
...|.+|+..= .....+.|..|..+|
T Consensus 8 iL~CP~ck~~L~~~~~~~~LiC~~cg~~Y 36 (68)
T 2hf1_A 8 ILVCPLCKGPLVFDKSKDELICKGDRLAF 36 (68)
T ss_dssp ECBCTTTCCBCEEETTTTEEEETTTTEEE
T ss_pred heECCCCCCcCeEeCCCCEEEcCCCCcEe
Confidence 35677777531 223444566666655
No 185
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=20.00 E-value=36 Score=24.11 Aligned_cols=27 Identities=7% Similarity=0.107 Sum_probs=14.7
Q ss_pred ccccccccccc---CCCCceeecccCCCcc
Q 020737 59 DVGCEQCGSGE---RAEELLLCDKCDKGFH 85 (322)
Q Consensus 59 ~~~C~~C~~~~---~~~~ll~Cd~C~~~~H 85 (322)
...|.+|+..= .....+.|..|.++|=
T Consensus 8 iL~CP~ck~~L~~~~~~~~LiC~~cg~~YP 37 (68)
T 2jr6_A 8 ILVCPVTKGRLEYHQDKQELWSRQAKLAYP 37 (68)
T ss_dssp CCBCSSSCCBCEEETTTTEEEETTTTEEEE
T ss_pred heECCCCCCcCeEeCCCCEEEcCCCCcEec
Confidence 45677777531 2234455666666653
Done!