BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 020738
         (322 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9SUC9|UGPI7_ARATH Uncharacterized GPI-anchored protein At4g28100 OS=Arabidopsis
           thaliana GN=At4g28100 PE=1 SV=1
          Length = 304

 Score =  421 bits (1083), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 215/288 (74%), Positives = 241/288 (83%), Gaps = 16/288 (5%)

Query: 40  EYASTNTVPAFPAQTQAATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRY 99
           E    NTVPAFP +TQA +CRLDLS ELFGGVNEACGR+LDRSRCCPVLAAWLFAAH+R 
Sbjct: 27  EPVQPNTVPAFPVETQAQSCRLDLSNELFGGVNEACGRNLDRSRCCPVLAAWLFAAHARS 86

Query: 100 ALQVPAAAPAAE---PDQPMMPDDSQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIR 156
           ALQ+PA AP  E   PD+PM PDDSQKCVN+LQSAL++K +KIPQPN+SCDAILCFCGIR
Sbjct: 87  ALQLPAPAPTPESSDPDEPMKPDDSQKCVNTLQSALLTKQIKIPQPNSSCDAILCFCGIR 146

Query: 157 LHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYSGCTKCLGALQMLK--GGSK 214
           LHQISSLSCPAAFNV++GF+N TPTAAVKNLEK CRNSSYSGCT+CLGALQ LK  GG+K
Sbjct: 147 LHQISSLSCPAAFNVSSGFKNATPTAAVKNLEKECRNSSYSGCTRCLGALQKLKVRGGNK 206

Query: 215 NGTAEHEDNRASKMFSRDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSSHPPHESKCSP 274
             T E    R +KM S+DCQLMGLTWLLARNKTAYIPTVSAVLRAIMYS HPPH +KCSP
Sbjct: 207 KTTTE----RGTKMMSKDCQLMGLTWLLARNKTAYIPTVSAVLRAIMYSPHPPHLNKCSP 262

Query: 275 DQENMPLAVDSLQFEKTQSSSSSPSRPQNVRAVLVPFLSLIILFSLLV 322
           DQENMPLAVDSLQF+K+ SSSS      ++  VL PFL L++   L +
Sbjct: 263 DQENMPLAVDSLQFQKSFSSSS------HLFGVL-PFLPLVLCIFLFL 303


>sp|Q9FX99|Y1497_ARATH Probable receptor-like protein kinase At1g49730 OS=Arabidopsis
           thaliana GN=At1g49730 PE=1 SV=1
          Length = 663

 Score = 39.3 bits (90), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 65/166 (39%), Gaps = 26/166 (15%)

Query: 56  AATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVPAAAPAAEPDQP 115
           AA C LD S   F  V   C    +R +CC  + A++  + +RYA            +  
Sbjct: 25  AADCPLDFSGSNFTLVATVCSNITNRGKCCRYMNAFVAVSVARYA--------NLSTNLG 76

Query: 116 MMPDDSQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGF 175
           +  D S+ C+ S+  A+    V     NA+      FCG+    +    C     VT   
Sbjct: 77  VTSDLSETCIASISRAMEGYGV---SRNAT-----SFCGLGTKILVKYDCDGRTTVT--- 125

Query: 176 RNVTPTAAVKNLEKNCRNSSYSG--CTKCLGA----LQMLKGGSKN 215
             +  +    ++ +NCR     G  C KCL +    L+ L G   N
Sbjct: 126 -QMHQSPGFGHVSRNCRLPFSPGHQCRKCLNSGITYLRNLIGAETN 170


>sp|Q03600|INA1_CAEEL Integrin alpha ina-1 OS=Caenorhabditis elegans GN=ina-1 PE=1 SV=1
          Length = 1139

 Score = 35.0 bits (79), Expect = 0.67,   Method: Composition-based stats.
 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 8/80 (10%)

Query: 128 LQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFR--NVTPTAAVK 185
           L S +VSK  K    N S  A++C   IR HQ ++    A + + +  R  +   T A K
Sbjct: 125 LASTIVSKGTK----NGS--ALVCAPLIRYHQTAAYPQGACYELESNLRLQSTYATCAQK 178

Query: 186 NLEKNCRNSSYSGCTKCLGA 205
           NL    R++ Y GC +   A
Sbjct: 179 NLPTTDRHNEYGGCMEGFSA 198


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.131    0.398 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,748,614
Number of Sequences: 539616
Number of extensions: 4273475
Number of successful extensions: 9792
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 9788
Number of HSP's gapped (non-prelim): 9
length of query: 322
length of database: 191,569,459
effective HSP length: 117
effective length of query: 205
effective length of database: 128,434,387
effective search space: 26329049335
effective search space used: 26329049335
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)