Query 020741
Match_columns 322
No_of_seqs 438 out of 1471
Neff 11.6
Searched_HMMs 46136
Date Fri Mar 29 04:46:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020741.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020741hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK00870 haloalkane dehalogena 100.0 7.2E-36 1.6E-40 243.2 21.2 256 26-320 20-301 (302)
2 KOG4178 Soluble epoxide hydrol 100.0 7.4E-36 1.6E-40 230.3 19.4 272 24-321 21-321 (322)
3 PLN02824 hydrolase, alpha/beta 100.0 2.4E-35 5.1E-40 239.5 19.6 268 23-320 6-294 (294)
4 PRK03592 haloalkane dehalogena 100.0 1.6E-34 3.4E-39 234.8 21.4 263 23-321 5-290 (295)
5 TIGR02240 PHA_depoly_arom poly 100.0 2.9E-34 6.3E-39 230.9 21.0 258 27-321 4-267 (276)
6 PLN02385 hydrolase; alpha/beta 100.0 1.6E-33 3.4E-38 233.5 19.8 265 26-321 62-346 (349)
7 PLN02965 Probable pheophorbida 100.0 1.8E-33 3.8E-38 223.6 17.8 239 60-322 5-255 (255)
8 PRK10749 lysophospholipase L2; 100.0 1.6E-32 3.4E-37 225.5 22.2 268 27-321 32-330 (330)
9 PLN02679 hydrolase, alpha/beta 100.0 9.5E-33 2.1E-37 229.0 20.7 269 28-321 64-358 (360)
10 PLN03087 BODYGUARD 1 domain co 100.0 9.5E-33 2.1E-37 231.7 20.8 272 23-320 174-479 (481)
11 TIGR03056 bchO_mg_che_rel puta 100.0 4.8E-32 1E-36 218.9 21.6 260 25-318 6-278 (278)
12 PLN03084 alpha/beta hydrolase 100.0 2.6E-31 5.7E-36 219.1 24.5 254 32-319 111-383 (383)
13 PHA02857 monoglyceride lipase; 100.0 1.3E-31 2.8E-36 215.8 21.6 257 29-321 4-274 (276)
14 PRK03204 haloalkane dehalogena 100.0 6.8E-32 1.5E-36 217.4 19.7 255 25-318 14-286 (286)
15 PRK10349 carboxylesterase BioH 100.0 3.6E-32 7.9E-37 216.5 17.4 236 58-319 13-255 (256)
16 PRK06489 hypothetical protein; 100.0 2.6E-31 5.6E-36 220.9 22.4 270 34-321 48-358 (360)
17 PRK10673 acyl-CoA esterase; Pr 100.0 2.4E-31 5.2E-36 212.0 21.3 247 37-319 2-254 (255)
18 PLN02578 hydrolase 100.0 3.3E-31 7.1E-36 219.6 22.3 258 28-318 69-353 (354)
19 TIGR03343 biphenyl_bphD 2-hydr 100.0 2E-31 4.4E-36 215.6 20.5 247 35-319 19-282 (282)
20 PLN02298 hydrolase, alpha/beta 100.0 4E-31 8.7E-36 217.9 22.0 266 26-320 33-317 (330)
21 TIGR02427 protocat_pcaD 3-oxoa 100.0 9.6E-31 2.1E-35 207.9 19.5 246 37-318 1-251 (251)
22 PRK11126 2-succinyl-6-hydroxy- 100.0 2.5E-31 5.4E-36 210.2 14.9 234 58-320 2-242 (242)
23 COG2267 PldB Lysophospholipase 100.0 5.4E-30 1.2E-34 204.8 22.1 269 23-321 7-295 (298)
24 TIGR03611 RutD pyrimidine util 100.0 1.1E-30 2.5E-35 208.4 16.0 250 38-319 1-257 (257)
25 PLN02211 methyl indole-3-aceta 100.0 9E-30 2E-34 203.1 20.1 251 33-319 4-269 (273)
26 PRK08775 homoserine O-acetyltr 100.0 1.3E-29 2.7E-34 209.6 21.4 263 25-321 36-340 (343)
27 KOG4409 Predicted hydrolase/ac 100.0 3.7E-29 8E-34 193.9 21.5 273 22-320 62-364 (365)
28 KOG1455 Lysophospholipase [Lip 100.0 4.1E-29 9E-34 190.0 19.8 269 24-320 26-312 (313)
29 PLN02652 hydrolase; alpha/beta 100.0 5.1E-29 1.1E-33 206.8 22.2 264 26-320 111-387 (395)
30 TIGR01250 pro_imino_pep_2 prol 100.0 9.2E-29 2E-33 200.7 23.4 265 29-318 6-288 (288)
31 TIGR01738 bioH putative pimelo 100.0 1.2E-29 2.7E-34 200.8 17.3 236 57-317 3-245 (245)
32 KOG1454 Predicted hydrolase/ac 100.0 5.5E-29 1.2E-33 200.9 19.0 283 24-321 24-325 (326)
33 PRK07581 hypothetical protein; 100.0 6E-29 1.3E-33 205.7 19.7 264 34-320 24-336 (339)
34 TIGR01392 homoserO_Ac_trn homo 100.0 6.6E-29 1.4E-33 206.0 18.7 262 34-318 14-351 (351)
35 PLN02894 hydrolase, alpha/beta 100.0 9.7E-28 2.1E-32 201.0 23.9 257 37-320 93-385 (402)
36 TIGR03695 menH_SHCHC 2-succiny 100.0 5.2E-29 1.1E-33 197.8 14.9 242 58-318 1-251 (251)
37 TIGR01249 pro_imino_pep_1 prol 100.0 7.5E-28 1.6E-32 196.1 21.6 124 26-174 5-130 (306)
38 PRK00175 metX homoserine O-ace 100.0 3.5E-28 7.5E-33 203.0 19.6 264 34-321 31-375 (379)
39 PF12697 Abhydrolase_6: Alpha/ 100.0 1.7E-29 3.8E-34 197.6 10.0 217 61-311 1-227 (228)
40 PLN02511 hydrolase 100.0 6.5E-28 1.4E-32 201.3 19.1 275 23-320 69-365 (388)
41 PRK14875 acetoin dehydrogenase 100.0 1.5E-27 3.3E-32 200.4 21.1 248 29-319 113-370 (371)
42 COG1647 Esterase/lipase [Gener 100.0 3.5E-28 7.5E-33 175.8 12.8 224 57-319 14-243 (243)
43 PRK05855 short chain dehydroge 100.0 1.4E-27 3.1E-32 212.3 19.0 266 28-320 5-292 (582)
44 TIGR01607 PST-A Plasmodium sub 100.0 2.1E-27 4.6E-32 194.4 17.3 271 30-319 2-332 (332)
45 PLN02980 2-oxoglutarate decarb 99.9 1.4E-26 3E-31 221.7 19.6 245 57-321 1370-1640(1655)
46 KOG2984 Predicted hydrolase [G 99.9 2.8E-26 6.1E-31 163.1 12.8 259 16-320 12-276 (277)
47 PRK13604 luxD acyl transferase 99.9 2.1E-25 4.6E-30 174.9 19.0 227 26-301 10-246 (307)
48 PRK10985 putative hydrolase; P 99.9 5.8E-25 1.3E-29 180.2 21.0 274 24-320 30-320 (324)
49 PRK05077 frsA fermentation/res 99.9 4E-24 8.7E-29 179.2 23.7 240 24-320 167-412 (414)
50 TIGR03100 hydr1_PEP hydrolase, 99.9 2E-24 4.2E-29 172.7 19.5 250 29-319 6-274 (274)
51 KOG2382 Predicted alpha/beta h 99.9 2.9E-24 6.2E-29 166.5 17.9 238 55-321 49-314 (315)
52 PRK06765 homoserine O-acetyltr 99.9 1.3E-23 2.9E-28 173.9 20.2 263 35-319 40-387 (389)
53 PLN02872 triacylglycerol lipas 99.9 5.3E-23 1.1E-27 170.3 20.7 278 24-320 43-389 (395)
54 TIGR01836 PHA_synth_III_C poly 99.9 6.1E-22 1.3E-26 164.2 19.5 245 57-319 61-349 (350)
55 KOG2564 Predicted acetyltransf 99.9 2.6E-22 5.7E-27 150.3 13.7 126 28-173 51-181 (343)
56 TIGR01838 PHA_synth_I poly(R)- 99.9 3.9E-21 8.3E-26 163.5 22.5 252 37-305 173-461 (532)
57 PRK10566 esterase; Provisional 99.9 2.3E-21 5E-26 153.8 19.8 202 57-320 26-248 (249)
58 PRK11071 esterase YqiA; Provis 99.9 2.2E-21 4.7E-26 145.8 17.1 184 59-318 2-189 (190)
59 COG0429 Predicted hydrolase of 99.9 8.8E-21 1.9E-25 146.8 19.1 272 24-320 48-340 (345)
60 COG3208 GrsT Predicted thioest 99.9 1.1E-20 2.3E-25 140.6 17.8 226 56-318 5-234 (244)
61 KOG1838 Alpha/beta hydrolase [ 99.9 6.2E-20 1.3E-24 147.5 22.8 283 22-319 90-387 (409)
62 KOG1552 Predicted alpha/beta h 99.9 4.5E-20 9.8E-25 138.2 17.8 214 24-320 34-252 (258)
63 KOG4391 Predicted alpha/beta h 99.9 1.4E-20 2.9E-25 135.9 13.8 238 9-321 36-283 (300)
64 COG1506 DAP2 Dipeptidyl aminop 99.9 5.3E-20 1.1E-24 162.4 19.7 238 24-321 364-617 (620)
65 PF00561 Abhydrolase_1: alpha/ 99.9 4.6E-22 9.9E-27 156.0 5.8 213 87-314 1-229 (230)
66 PRK07868 acyl-CoA synthetase; 99.9 2E-19 4.3E-24 167.5 23.2 252 56-321 65-362 (994)
67 PF12695 Abhydrolase_5: Alpha/ 99.8 2.7E-20 5.8E-25 135.1 12.9 141 60-299 1-145 (145)
68 COG0596 MhpC Predicted hydrola 99.8 1.7E-18 3.7E-23 138.8 21.3 255 34-318 8-280 (282)
69 PF06342 DUF1057: Alpha/beta h 99.8 7E-18 1.5E-22 128.2 20.8 107 56-178 33-141 (297)
70 KOG4667 Predicted esterase [Li 99.8 5.4E-19 1.2E-23 127.6 13.7 216 57-317 32-255 (269)
71 TIGR03101 hydr2_PEP hydrolase, 99.8 1.3E-18 2.7E-23 136.3 14.8 123 28-173 3-133 (266)
72 PRK11460 putative hydrolase; P 99.8 1E-17 2.2E-22 130.3 17.4 170 56-319 14-207 (232)
73 PLN02442 S-formylglutathione h 99.8 1.7E-17 3.8E-22 133.0 17.7 204 34-301 28-264 (283)
74 COG2021 MET2 Homoserine acetyl 99.8 2.7E-17 5.8E-22 129.9 16.8 264 34-319 34-367 (368)
75 TIGR02821 fghA_ester_D S-formy 99.8 8.7E-17 1.9E-21 128.8 18.4 124 34-174 23-173 (275)
76 PF06500 DUF1100: Alpha/beta h 99.7 2.2E-16 4.8E-21 128.2 18.7 240 23-320 163-409 (411)
77 PLN00021 chlorophyllase 99.7 1.5E-16 3.2E-21 128.2 16.9 122 36-173 37-165 (313)
78 PF00975 Thioesterase: Thioest 99.7 6.7E-16 1.4E-20 120.9 20.3 222 59-317 1-229 (229)
79 PF00326 Peptidase_S9: Prolyl 99.7 1.3E-17 2.7E-22 128.9 10.2 189 77-320 5-209 (213)
80 TIGR01849 PHB_depoly_PhaZ poly 99.7 1.2E-15 2.7E-20 125.1 19.9 252 58-320 102-406 (406)
81 PF05448 AXE1: Acetyl xylan es 99.7 2.5E-16 5.4E-21 127.0 15.0 236 26-320 57-320 (320)
82 PRK10162 acetyl esterase; Prov 99.7 4.1E-15 8.8E-20 121.4 22.1 242 25-320 57-315 (318)
83 COG2945 Predicted hydrolase of 99.7 6.6E-16 1.4E-20 110.1 14.4 173 56-318 26-205 (210)
84 PF01738 DLH: Dienelactone hyd 99.7 1.2E-15 2.6E-20 118.2 15.2 179 56-320 12-217 (218)
85 TIGR01840 esterase_phb esteras 99.7 3.8E-15 8.2E-20 114.8 17.4 107 56-174 11-130 (212)
86 TIGR01839 PHA_synth_II poly(R) 99.7 2.4E-15 5.3E-20 127.0 17.0 229 56-301 213-483 (560)
87 COG4757 Predicted alpha/beta h 99.7 3.6E-16 7.9E-21 114.5 9.9 257 28-317 8-280 (281)
88 TIGR00976 /NonD putative hydro 99.7 5.7E-15 1.2E-19 129.5 19.3 122 31-174 2-132 (550)
89 PF03096 Ndr: Ndr family; Int 99.7 1.1E-14 2.3E-19 112.5 18.4 257 28-320 2-279 (283)
90 COG3458 Acetyl esterase (deace 99.7 2.1E-15 4.5E-20 113.3 12.8 233 27-320 58-317 (321)
91 PF02230 Abhydrolase_2: Phosph 99.7 1.3E-15 2.7E-20 117.7 12.1 177 55-320 11-215 (216)
92 PF06821 Ser_hydrolase: Serine 99.7 2.4E-15 5.3E-20 110.1 12.9 157 61-304 1-158 (171)
93 KOG2931 Differentiation-relate 99.7 1.4E-13 3.1E-18 104.8 21.5 260 25-319 22-305 (326)
94 PF12146 Hydrolase_4: Putative 99.6 7.1E-16 1.5E-20 97.1 7.5 79 35-123 1-79 (79)
95 PF02273 Acyl_transf_2: Acyl t 99.6 1.3E-13 2.7E-18 102.3 19.7 222 27-301 4-239 (294)
96 TIGR03230 lipo_lipase lipoprot 99.6 3.7E-15 8.1E-20 123.7 12.3 107 56-176 39-156 (442)
97 cd00707 Pancreat_lipase_like P 99.6 2.2E-15 4.8E-20 119.9 9.8 124 28-176 17-149 (275)
98 COG0412 Dienelactone hydrolase 99.6 1.2E-13 2.7E-18 106.9 19.0 197 28-320 5-233 (236)
99 PRK10115 protease 2; Provision 99.6 8.8E-14 1.9E-18 124.1 19.9 218 25-300 416-654 (686)
100 KOG2624 Triglyceride lipase-ch 99.6 2.3E-13 5E-18 111.6 19.9 276 24-320 47-398 (403)
101 TIGR03502 lipase_Pla1_cef extr 99.6 8.9E-14 1.9E-18 122.7 17.5 118 29-148 421-575 (792)
102 PF08538 DUF1749: Protein of u 99.6 1.8E-14 4E-19 112.4 11.0 242 57-318 32-303 (303)
103 COG0400 Predicted esterase [Ge 99.5 2.6E-13 5.7E-18 101.7 14.1 172 55-320 15-205 (207)
104 KOG2565 Predicted hydrolases o 99.5 2.8E-13 6E-18 106.4 14.5 118 34-170 132-260 (469)
105 COG3545 Predicted esterase of 99.5 1.6E-12 3.5E-17 91.9 13.0 175 59-321 3-180 (181)
106 PF02129 Peptidase_S15: X-Pro 99.5 1.8E-12 3.9E-17 103.8 13.8 122 34-174 1-136 (272)
107 KOG1515 Arylacetamide deacetyl 99.5 1.2E-10 2.6E-15 93.9 23.6 251 25-320 61-335 (336)
108 KOG4627 Kynurenine formamidase 99.4 1.3E-12 2.8E-17 94.2 10.5 210 29-317 47-268 (270)
109 PF05728 UPF0227: Uncharacteri 99.4 1.8E-11 3.9E-16 90.7 16.7 181 61-317 2-186 (187)
110 PF10230 DUF2305: Uncharacteri 99.4 5.5E-12 1.2E-16 99.9 14.9 112 58-178 2-126 (266)
111 PF06028 DUF915: Alpha/beta hy 99.4 6.7E-12 1.5E-16 97.5 14.4 208 56-317 9-252 (255)
112 COG3571 Predicted hydrolase of 99.4 1.6E-11 3.4E-16 85.0 13.1 184 56-321 12-212 (213)
113 PRK05371 x-prolyl-dipeptidyl a 99.4 2.2E-11 4.9E-16 109.6 17.7 221 78-320 271-519 (767)
114 PF03959 FSH1: Serine hydrolas 99.4 6.9E-12 1.5E-16 96.2 11.3 174 57-305 3-207 (212)
115 KOG3043 Predicted hydrolase re 99.4 1.1E-11 2.4E-16 91.0 11.4 176 57-320 38-240 (242)
116 COG3319 Thioesterase domains o 99.4 8.6E-11 1.9E-15 91.0 16.9 103 59-175 1-104 (257)
117 PF07859 Abhydrolase_3: alpha/ 99.4 3E-11 6.5E-16 93.3 14.3 97 61-174 1-110 (211)
118 PRK10252 entF enterobactin syn 99.4 5.4E-11 1.2E-15 115.8 18.8 103 57-174 1067-1171(1296)
119 PTZ00472 serine carboxypeptida 99.4 7.5E-10 1.6E-14 94.5 23.1 138 26-174 48-216 (462)
120 COG0657 Aes Esterase/lipase [L 99.3 3.2E-10 7E-15 92.9 19.6 128 32-176 58-193 (312)
121 PF12740 Chlorophyllase2: Chlo 99.3 2.6E-11 5.6E-16 93.2 12.1 110 56-174 15-131 (259)
122 KOG2100 Dipeptidyl aminopeptid 99.3 1.4E-10 3.1E-15 104.2 18.6 232 23-320 496-747 (755)
123 COG3243 PhaC Poly(3-hydroxyalk 99.3 4.3E-11 9.3E-16 96.5 13.3 105 57-176 106-219 (445)
124 PF09752 DUF2048: Uncharacteri 99.3 7.7E-10 1.7E-14 88.1 17.6 234 56-318 90-347 (348)
125 PF08840 BAAT_C: BAAT / Acyl-C 99.3 9.6E-11 2.1E-15 89.7 11.4 52 113-176 4-58 (213)
126 KOG3975 Uncharacterized conser 99.2 2.6E-10 5.6E-15 85.1 12.3 261 34-317 9-300 (301)
127 KOG2281 Dipeptidyl aminopeptid 99.2 4.9E-10 1.1E-14 94.5 15.0 231 28-319 616-866 (867)
128 PF07224 Chlorophyllase: Chlor 99.2 1.7E-10 3.7E-15 86.9 11.0 106 56-174 44-157 (307)
129 PF12715 Abhydrolase_7: Abhydr 99.2 3.1E-10 6.6E-15 91.3 12.9 128 27-172 90-258 (390)
130 KOG2551 Phospholipase/carboxyh 99.2 1.6E-09 3.4E-14 79.9 15.1 183 57-319 4-219 (230)
131 PF10503 Esterase_phd: Esteras 99.2 1.8E-09 3.9E-14 82.1 15.9 120 38-174 1-132 (220)
132 smart00824 PKS_TE Thioesterase 99.2 2.3E-09 5E-14 82.7 16.1 98 63-175 2-103 (212)
133 PF03403 PAF-AH_p_II: Platelet 99.2 1.1E-10 2.4E-15 96.8 8.8 40 56-96 98-137 (379)
134 PF06057 VirJ: Bacterial virul 99.2 4.9E-10 1.1E-14 81.4 10.5 101 59-174 3-107 (192)
135 PF07819 PGAP1: PGAP1-like pro 99.1 4.6E-10 1E-14 86.5 10.0 101 57-173 3-122 (225)
136 KOG1553 Predicted alpha/beta h 99.1 1.4E-10 3E-15 90.7 7.0 126 26-172 215-343 (517)
137 COG4099 Predicted peptidase [G 99.1 4.1E-09 8.8E-14 81.0 13.5 126 28-172 164-302 (387)
138 COG4188 Predicted dienelactone 99.1 5.9E-10 1.3E-14 89.1 8.5 90 57-147 70-178 (365)
139 PF00450 Peptidase_S10: Serine 99.1 8.4E-09 1.8E-13 88.3 16.2 140 26-174 12-181 (415)
140 COG2936 Predicted acyl esteras 99.1 9.2E-09 2E-13 87.4 15.8 132 26-175 20-160 (563)
141 PRK04940 hypothetical protein; 99.1 1.7E-08 3.8E-13 73.3 14.9 172 60-319 1-179 (180)
142 PF01674 Lipase_2: Lipase (cla 99.0 2.1E-10 4.6E-15 87.0 3.1 87 59-148 2-95 (219)
143 COG4814 Uncharacterized protei 99.0 6.9E-08 1.5E-12 72.7 15.2 110 57-173 44-175 (288)
144 PF03583 LIP: Secretory lipase 98.9 3E-08 6.6E-13 79.7 12.9 58 258-319 217-280 (290)
145 KOG2112 Lysophospholipase [Lip 98.9 1.7E-08 3.8E-13 74.0 9.7 175 58-320 3-204 (206)
146 KOG4840 Predicted hydrolases o 98.9 9.4E-08 2E-12 70.4 13.4 104 57-176 35-146 (299)
147 PLN02733 phosphatidylcholine-s 98.9 9.2E-09 2E-13 86.6 9.2 92 69-173 105-200 (440)
148 KOG3847 Phospholipase A2 (plat 98.8 5.8E-08 1.3E-12 75.3 10.9 43 55-98 115-157 (399)
149 PF00151 Lipase: Lipase; Inte 98.8 2.5E-09 5.5E-14 87.0 3.4 112 56-178 69-191 (331)
150 KOG1282 Serine carboxypeptidas 98.8 4.9E-06 1.1E-10 70.0 21.1 139 26-174 45-213 (454)
151 PF11339 DUF3141: Protein of u 98.7 9.2E-06 2E-10 68.1 21.2 78 77-174 92-174 (581)
152 PF05705 DUF829: Eukaryotic pr 98.7 9.7E-07 2.1E-11 69.5 14.8 227 60-317 1-240 (240)
153 KOG3253 Predicted alpha/beta h 98.7 1.5E-07 3.2E-12 79.4 10.3 175 57-320 175-374 (784)
154 PF05677 DUF818: Chlamydia CHL 98.7 2.5E-07 5.4E-12 73.3 10.9 111 25-148 112-235 (365)
155 PF05990 DUF900: Alpha/beta hy 98.7 8.1E-08 1.8E-12 74.6 8.0 115 56-173 16-136 (233)
156 PRK10439 enterobactin/ferric e 98.6 1.9E-06 4E-11 72.8 15.5 121 35-173 191-322 (411)
157 PLN02209 serine carboxypeptida 98.6 2.2E-05 4.8E-10 66.7 20.7 139 26-174 40-212 (437)
158 COG3509 LpqC Poly(3-hydroxybut 98.6 1.4E-06 3E-11 67.6 11.9 128 26-174 36-179 (312)
159 PLN03016 sinapoylglucose-malat 98.6 1.3E-05 2.8E-10 68.1 18.0 140 26-174 38-210 (433)
160 PF12048 DUF3530: Protein of u 98.5 1.8E-05 3.8E-10 64.3 17.5 109 55-173 84-228 (310)
161 PLN02606 palmitoyl-protein thi 98.5 8.6E-06 1.9E-10 64.3 14.8 102 57-174 25-132 (306)
162 PF05057 DUF676: Putative seri 98.5 7.4E-07 1.6E-11 68.7 8.8 90 57-150 3-100 (217)
163 PF00756 Esterase: Putative es 98.4 1.1E-06 2.4E-11 69.8 7.3 123 35-173 5-149 (251)
164 PF10340 DUF2424: Protein of u 98.4 7E-05 1.5E-09 61.4 17.3 110 56-175 120-236 (374)
165 COG1075 LipA Predicted acetylt 98.4 1.6E-06 3.5E-11 71.3 7.8 101 58-174 59-164 (336)
166 KOG1551 Uncharacterized conser 98.3 2.5E-05 5.5E-10 59.5 12.8 57 263-321 309-367 (371)
167 PF04301 DUF452: Protein of un 98.3 3.2E-05 7E-10 58.3 13.3 80 57-175 10-91 (213)
168 PLN02633 palmitoyl protein thi 98.3 2.3E-05 5E-10 62.0 12.6 102 57-173 24-130 (314)
169 COG4553 DepA Poly-beta-hydroxy 98.3 6.4E-05 1.4E-09 58.3 14.5 111 56-177 101-212 (415)
170 COG1770 PtrB Protease II [Amin 98.2 0.00012 2.5E-09 63.4 16.4 132 26-173 420-561 (682)
171 KOG3101 Esterase D [General fu 98.2 1.5E-05 3.3E-10 58.6 9.3 122 35-172 25-174 (283)
172 COG4782 Uncharacterized protei 98.2 1.5E-05 3.2E-10 64.0 9.0 113 56-172 114-232 (377)
173 PF02089 Palm_thioest: Palmito 98.1 1.6E-05 3.4E-10 62.3 8.5 106 57-174 4-116 (279)
174 KOG3724 Negative regulator of 98.1 6.1E-06 1.3E-10 72.2 6.7 132 26-173 58-219 (973)
175 cd00312 Esterase_lipase Estera 98.1 1.8E-05 3.9E-10 69.5 9.9 105 56-174 93-213 (493)
176 COG1505 Serine proteases of th 98.1 3.2E-05 7E-10 66.0 10.1 235 24-319 393-645 (648)
177 PF05577 Peptidase_S28: Serine 98.1 2.5E-05 5.4E-10 67.3 9.4 105 57-173 28-147 (434)
178 PF08386 Abhydrolase_4: TAP-li 98.1 1.4E-05 3E-10 53.5 6.1 60 259-319 33-93 (103)
179 KOG2237 Predicted serine prote 98.0 8.5E-05 1.8E-09 63.9 11.4 129 25-170 441-579 (712)
180 PF02450 LCAT: Lecithin:choles 98.0 2.5E-05 5.5E-10 65.8 7.5 85 73-173 66-159 (389)
181 PLN02213 sinapoylglucose-malat 97.9 0.0013 2.8E-08 54.1 16.5 85 87-174 2-96 (319)
182 COG2272 PnbA Carboxylesterase 97.9 5.7E-05 1.2E-09 63.3 8.6 107 56-175 92-218 (491)
183 PF10142 PhoPQ_related: PhoPQ- 97.9 0.00019 4E-09 59.2 11.4 60 257-320 259-320 (367)
184 COG1073 Hydrolases of the alph 97.9 0.00035 7.5E-09 56.9 13.3 65 256-320 227-297 (299)
185 KOG2541 Palmitoyl protein thio 97.9 0.00016 3.5E-09 55.5 10.0 102 57-174 22-128 (296)
186 COG3150 Predicted esterase [Ge 97.9 6.7E-05 1.5E-09 53.2 7.4 77 61-148 2-79 (191)
187 PF04083 Abhydro_lipase: Parti 97.8 9.9E-05 2.2E-09 43.9 5.6 50 24-75 11-60 (63)
188 PF00135 COesterase: Carboxyle 97.7 0.00017 3.6E-09 64.2 7.8 105 57-174 124-245 (535)
189 PF11144 DUF2920: Protein of u 97.5 0.0069 1.5E-07 50.2 14.3 59 34-100 18-79 (403)
190 KOG2183 Prolylcarboxypeptidase 97.5 0.00059 1.3E-08 55.8 7.7 100 59-171 81-199 (492)
191 PF07082 DUF1350: Protein of u 97.4 0.0018 3.8E-08 49.8 9.1 93 57-172 16-123 (250)
192 KOG3967 Uncharacterized conser 97.4 0.0017 3.8E-08 48.1 8.6 108 56-173 99-226 (297)
193 cd00741 Lipase Lipase. Lipase 97.4 0.00088 1.9E-08 48.7 7.1 56 112-174 8-67 (153)
194 COG0627 Predicted esterase [Ge 97.4 0.0018 4E-08 52.5 9.2 107 56-174 52-187 (316)
195 PF01764 Lipase_3: Lipase (cla 97.3 0.0014 3.1E-08 46.7 7.7 39 113-152 49-88 (140)
196 COG2819 Predicted hydrolase of 97.2 0.03 6.4E-07 43.8 13.4 46 116-173 122-171 (264)
197 COG3946 VirJ Type IV secretory 97.1 0.0015 3.3E-08 53.4 6.3 84 57-148 259-346 (456)
198 KOG1202 Animal-type fatty acid 97.1 0.023 5.1E-07 53.3 14.1 97 56-174 2121-2219(2376)
199 COG2939 Carboxypeptidase C (ca 97.0 0.0057 1.2E-07 51.9 8.9 97 54-152 97-222 (498)
200 PF11187 DUF2974: Protein of u 97.0 0.0084 1.8E-07 46.3 9.1 51 116-174 73-123 (224)
201 KOG2521 Uncharacterized conser 96.9 0.025 5.5E-07 46.4 11.5 243 57-321 37-291 (350)
202 KOG2182 Hydrolytic enzymes of 96.9 0.0092 2E-07 50.5 8.9 105 56-172 84-205 (514)
203 PLN02517 phosphatidylcholine-s 96.9 0.0021 4.6E-08 55.7 5.3 68 73-148 157-233 (642)
204 PF06259 Abhydrolase_8: Alpha/ 96.8 0.059 1.3E-06 39.8 11.8 53 110-174 86-144 (177)
205 COG2382 Fes Enterochelin ester 96.6 0.066 1.4E-06 42.6 11.7 100 56-172 96-209 (299)
206 PF06850 PHB_depo_C: PHB de-po 96.6 0.0038 8.2E-08 46.0 4.3 61 260-320 134-202 (202)
207 cd00519 Lipase_3 Lipase (class 96.5 0.013 2.8E-07 45.8 7.1 24 128-151 128-151 (229)
208 PLN02454 triacylglycerol lipas 96.3 0.018 4E-07 48.2 7.1 37 116-152 214-252 (414)
209 PF11288 DUF3089: Protein of u 96.2 0.015 3.4E-07 43.8 5.7 68 80-148 40-115 (207)
210 PF08237 PE-PPE: PE-PPE domain 96.2 0.084 1.8E-06 40.9 9.8 66 86-151 2-71 (225)
211 PLN02408 phospholipase A1 96.2 0.023 4.9E-07 46.9 7.0 38 114-151 184-223 (365)
212 PF06441 EHN: Epoxide hydrolas 96.1 0.012 2.6E-07 39.7 4.4 39 28-75 71-109 (112)
213 PLN02571 triacylglycerol lipas 96.0 0.011 2.5E-07 49.4 4.7 41 112-152 208-250 (413)
214 KOG2369 Lecithin:cholesterol a 95.8 0.0099 2.2E-07 50.0 3.7 71 72-150 124-204 (473)
215 KOG1516 Carboxylesterase and r 95.8 0.035 7.5E-07 49.7 7.2 89 58-146 112-213 (545)
216 PLN00413 triacylglycerol lipas 95.7 0.02 4.3E-07 48.7 4.9 37 112-149 268-305 (479)
217 PLN02162 triacylglycerol lipas 95.6 0.021 4.6E-07 48.3 4.8 39 111-149 261-299 (475)
218 KOG4372 Predicted alpha/beta h 95.6 0.016 3.4E-07 47.9 3.8 87 56-146 78-168 (405)
219 KOG1283 Serine carboxypeptidas 95.5 0.19 4.1E-06 40.3 9.3 115 29-151 7-145 (414)
220 PF05277 DUF726: Protein of un 95.5 0.052 1.1E-06 44.7 6.5 43 126-174 217-260 (345)
221 PLN02324 triacylglycerol lipas 95.5 0.023 4.9E-07 47.6 4.5 38 114-151 199-238 (415)
222 COG4947 Uncharacterized protei 95.4 0.02 4.2E-07 41.2 3.3 42 120-173 93-135 (227)
223 PLN02934 triacylglycerol lipas 95.4 0.027 5.8E-07 48.3 4.6 38 112-150 305-343 (515)
224 PLN02310 triacylglycerol lipas 95.4 0.068 1.5E-06 44.8 6.9 39 112-150 189-231 (405)
225 PLN02802 triacylglycerol lipas 95.3 0.027 5.8E-07 48.3 4.5 39 113-151 313-353 (509)
226 COG2830 Uncharacterized protei 95.1 0.85 1.9E-05 32.7 11.4 77 59-173 12-89 (214)
227 PLN03037 lipase class 3 family 95.0 0.11 2.3E-06 44.9 7.1 38 113-150 299-340 (525)
228 KOG4388 Hormone-sensitive lipa 95.0 0.12 2.5E-06 45.0 7.2 102 56-172 394-506 (880)
229 PF05576 Peptidase_S37: PS-10 94.9 0.054 1.2E-06 45.0 5.0 103 56-173 61-168 (448)
230 PF07519 Tannase: Tannase and 94.8 0.6 1.3E-05 40.8 11.5 60 260-319 353-426 (474)
231 PF01083 Cutinase: Cutinase; 94.8 0.17 3.6E-06 37.8 7.0 76 87-173 40-121 (179)
232 PLN02761 lipase class 3 family 94.6 0.057 1.2E-06 46.5 4.6 39 113-151 273-317 (527)
233 PLN02719 triacylglycerol lipas 94.6 0.055 1.2E-06 46.5 4.4 38 114-151 279-321 (518)
234 PLN02753 triacylglycerol lipas 94.4 0.068 1.5E-06 46.1 4.5 39 113-151 292-335 (531)
235 PLN02847 triacylglycerol lipas 94.3 0.15 3.2E-06 44.8 6.4 23 128-150 251-273 (633)
236 KOG4569 Predicted lipase [Lipi 94.1 0.21 4.5E-06 41.5 6.7 40 112-152 155-195 (336)
237 KOG2029 Uncharacterized conser 93.4 0.24 5.3E-06 43.2 6.0 64 110-173 505-571 (697)
238 COG4287 PqaA PhoPQ-activated p 92.3 0.59 1.3E-05 38.4 6.5 60 257-320 326-387 (507)
239 TIGR03712 acc_sec_asp2 accesso 91.5 8.8 0.00019 33.3 14.1 86 56-148 287-377 (511)
240 COG5153 CVT17 Putative lipase 88.8 0.5 1.1E-05 37.3 3.2 32 117-148 264-296 (425)
241 KOG4540 Putative lipase essent 88.8 0.5 1.1E-05 37.3 3.2 32 117-148 264-296 (425)
242 PRK12467 peptide synthase; Pro 88.5 3.6 7.8E-05 46.4 10.3 89 57-151 3691-3780(3956)
243 COG3673 Uncharacterized conser 87.5 3 6.5E-05 33.8 6.7 93 56-148 29-142 (423)
244 PF07519 Tannase: Tannase and 87.3 1 2.2E-05 39.4 4.6 120 32-174 9-150 (474)
245 KOG2385 Uncharacterized conser 86.8 2.9 6.2E-05 36.3 6.6 53 117-176 434-489 (633)
246 PF03283 PAE: Pectinacetyleste 86.2 7.3 0.00016 32.9 8.8 39 113-151 138-179 (361)
247 PF09994 DUF2235: Uncharacteri 85.7 5.4 0.00012 32.3 7.6 90 59-148 2-112 (277)
248 cd01714 ETF_beta The electron 84.2 9.1 0.0002 29.2 7.9 72 79-170 69-145 (202)
249 PRK05282 (alpha)-aspartyl dipe 79.1 5.3 0.00011 31.3 5.1 90 57-146 30-130 (233)
250 COG3340 PepE Peptidase E [Amin 75.1 6.1 0.00013 30.1 4.2 88 57-144 31-133 (224)
251 PF00326 Peptidase_S9: Prolyl 74.5 4.6 9.9E-05 31.0 3.7 67 57-127 143-211 (213)
252 cd03146 GAT1_Peptidase_E Type 73.6 9.9 0.00021 29.3 5.3 86 57-145 30-130 (212)
253 TIGR02069 cyanophycinase cyano 73.5 7 0.00015 31.0 4.5 90 57-146 27-133 (250)
254 PF09949 DUF2183: Uncharacteri 72.9 22 0.00047 23.6 6.0 63 76-140 14-77 (100)
255 PF05576 Peptidase_S37: PS-10 72.7 5.6 0.00012 33.7 3.9 60 258-318 349-412 (448)
256 COG4822 CbiK Cobalamin biosynt 71.9 13 0.00028 28.3 5.2 62 56-133 136-199 (265)
257 COG0529 CysC Adenylylsulfate k 68.5 8 0.00017 28.7 3.4 61 57-121 21-84 (197)
258 COG1506 DAP2 Dipeptidyl aminop 65.0 21 0.00045 32.9 6.3 67 56-126 549-617 (620)
259 PF06309 Torsin: Torsin; Inte 64.8 7.4 0.00016 27.0 2.6 59 56-125 50-116 (127)
260 KOG3062 RNA polymerase II elon 63.8 46 0.00099 26.0 6.7 83 60-143 2-88 (281)
261 PF02230 Abhydrolase_2: Phosph 61.5 24 0.00053 27.1 5.3 59 57-124 154-214 (216)
262 PF00698 Acyl_transf_1: Acyl t 61.5 8.4 0.00018 31.9 2.9 27 119-146 75-102 (318)
263 cd03145 GAT1_cyanophycinase Ty 61.0 19 0.00041 27.9 4.6 90 57-146 28-134 (217)
264 PF06792 UPF0261: Uncharacteri 60.6 79 0.0017 27.2 8.2 88 60-148 3-115 (403)
265 cd07212 Pat_PNPLA9 Patatin-lik 60.1 15 0.00032 30.4 4.0 30 118-147 17-51 (312)
266 TIGR02884 spore_pdaA delta-lac 59.7 10 0.00022 29.5 2.9 35 58-93 186-221 (224)
267 smart00827 PKS_AT Acyl transfe 58.4 15 0.00032 30.0 3.8 26 120-146 74-100 (298)
268 TIGR03707 PPK2_P_aer polyphosp 57.3 33 0.00071 26.9 5.3 70 57-141 29-102 (230)
269 COG0218 Predicted GTPase [Gene 56.7 14 0.0003 28.0 3.0 57 258-319 133-198 (200)
270 PF10605 3HBOH: 3HB-oligomer h 56.3 9.7 0.00021 34.1 2.4 42 260-301 555-605 (690)
271 TIGR03131 malonate_mdcH malona 55.7 18 0.00039 29.5 3.9 26 120-146 68-94 (295)
272 COG1073 Hydrolases of the alph 55.5 1.3 2.9E-05 35.7 -2.7 88 56-148 47-152 (299)
273 KOG4389 Acetylcholinesterase/B 55.4 26 0.00056 30.7 4.7 80 57-143 134-233 (601)
274 COG3727 Vsr DNA G:T-mismatch r 54.9 35 0.00077 23.8 4.4 14 79-92 101-114 (150)
275 TIGR03709 PPK2_rel_1 polyphosp 54.6 30 0.00065 27.8 4.7 70 57-141 54-127 (264)
276 PRK10279 hypothetical protein; 52.4 26 0.00056 28.8 4.2 29 118-147 23-52 (300)
277 TIGR02764 spore_ybaN_pdaB poly 51.2 12 0.00027 28.2 2.1 34 59-93 152-188 (191)
278 PF10081 Abhydrolase_9: Alpha/ 50.2 40 0.00087 27.2 4.7 39 128-174 109-147 (289)
279 TIGR01361 DAHP_synth_Bsub phos 49.8 1.3E+02 0.0029 24.1 8.7 73 57-138 131-206 (260)
280 cd07225 Pat_PNPLA6_PNPLA7 Pata 49.4 31 0.00067 28.5 4.2 30 118-148 33-63 (306)
281 cd07198 Patatin Patatin-like p 49.0 35 0.00076 25.2 4.2 20 128-147 26-45 (172)
282 PLN02748 tRNA dimethylallyltra 48.6 1E+02 0.0023 27.2 7.4 78 56-136 19-120 (468)
283 TIGR02873 spore_ylxY probable 48.4 19 0.0004 29.0 2.8 34 59-93 231-264 (268)
284 PRK13397 3-deoxy-7-phosphohept 48.2 1.3E+02 0.0028 24.0 7.2 40 57-97 121-160 (250)
285 PF01583 APS_kinase: Adenylyls 47.8 22 0.00047 25.9 2.8 36 58-93 1-37 (156)
286 cd07207 Pat_ExoU_VipD_like Exo 47.8 35 0.00076 25.7 4.1 20 128-147 27-46 (194)
287 PRK13398 3-deoxy-7-phosphohept 47.5 1.5E+02 0.0033 23.9 8.6 75 57-138 133-208 (266)
288 COG3933 Transcriptional antite 47.1 1.1E+02 0.0025 26.6 7.1 75 57-146 108-183 (470)
289 TIGR03586 PseI pseudaminic aci 46.7 1.6E+02 0.0034 24.7 7.9 79 57-146 133-212 (327)
290 cd07211 Pat_PNPLA8 Patatin-lik 46.4 27 0.00059 28.8 3.6 17 131-147 44-60 (308)
291 cd07227 Pat_Fungal_NTE1 Fungal 46.2 38 0.00083 27.3 4.2 30 118-148 28-58 (269)
292 TIGR02816 pfaB_fam PfaB family 45.9 31 0.00066 31.0 3.9 29 119-147 255-284 (538)
293 cd03129 GAT1_Peptidase_E_like 45.7 48 0.001 25.5 4.6 89 57-145 28-130 (210)
294 COG1752 RssA Predicted esteras 45.2 34 0.00073 28.2 3.9 30 118-148 29-59 (306)
295 KOG0781 Signal recognition par 45.1 84 0.0018 27.7 6.1 95 63-170 443-538 (587)
296 TIGR00128 fabD malonyl CoA-acy 45.0 33 0.00071 27.8 3.8 20 128-147 83-102 (290)
297 PRK02399 hypothetical protein; 44.6 2.1E+02 0.0045 24.8 9.0 86 62-148 6-117 (406)
298 PRK14729 miaA tRNA delta(2)-is 41.6 1.6E+02 0.0034 24.3 7.1 74 60-136 5-101 (300)
299 cd07210 Pat_hypo_W_succinogene 41.1 51 0.0011 25.6 4.2 20 128-147 28-47 (221)
300 COG0400 Predicted esterase [Ge 41.0 1.1E+02 0.0023 23.7 5.7 41 55-95 143-185 (207)
301 PRK06490 glutamine amidotransf 40.7 1.8E+02 0.0039 23.0 8.8 85 57-146 7-103 (239)
302 PF08433 KTI12: Chromatin asso 40.1 44 0.00096 27.0 3.7 77 60-137 2-79 (270)
303 COG2939 Carboxypeptidase C (ca 39.9 42 0.00092 29.5 3.7 57 261-319 426-490 (498)
304 PF09370 TIM-br_sig_trns: TIM- 38.8 31 0.00066 27.5 2.5 65 74-142 158-225 (268)
305 PF06500 DUF1100: Alpha/beta h 38.6 62 0.0013 27.9 4.5 61 258-320 187-255 (411)
306 PF03681 UPF0150: Uncharacteri 38.3 53 0.0011 18.0 2.9 35 84-125 11-45 (48)
307 PF14253 AbiH: Bacteriophage a 37.8 28 0.00061 27.9 2.4 14 128-141 235-248 (270)
308 cd07205 Pat_PNPLA6_PNPLA7_NTE1 37.5 65 0.0014 23.8 4.1 20 128-147 28-47 (175)
309 cd07209 Pat_hypo_Ecoli_Z1214_l 37.3 67 0.0014 24.8 4.3 20 128-147 26-45 (215)
310 KOG1209 1-Acyl dihydroxyaceton 36.6 67 0.0015 24.9 3.9 37 57-95 5-41 (289)
311 PF03853 YjeF_N: YjeF-related 36.4 41 0.0009 24.8 2.9 34 57-91 24-57 (169)
312 PHA02114 hypothetical protein 35.8 34 0.00074 22.3 2.0 34 59-93 83-116 (127)
313 cd07228 Pat_NTE_like_bacteria 35.7 71 0.0015 23.6 4.1 20 128-147 28-47 (175)
314 PRK15180 Vi polysaccharide bio 35.7 93 0.002 27.4 5.0 76 60-136 98-197 (831)
315 TIGR00632 vsr DNA mismatch end 35.2 47 0.001 22.8 2.7 14 79-92 100-113 (117)
316 cd05312 NAD_bind_1_malic_enz N 35.1 39 0.00085 27.3 2.7 85 60-148 26-126 (279)
317 TIGR01425 SRP54_euk signal rec 34.5 2.7E+02 0.0059 24.4 7.7 56 83-149 179-235 (429)
318 PF01221 Dynein_light: Dynein 34.4 34 0.00074 22.0 1.9 32 110-141 34-66 (89)
319 COG4088 Predicted nucleotide k 34.1 57 0.0012 25.2 3.2 35 60-94 2-37 (261)
320 COG0541 Ffh Signal recognition 33.8 3.3E+02 0.0071 23.9 8.0 70 81-170 177-247 (451)
321 COG3887 Predicted signaling pr 33.6 1.2E+02 0.0026 27.6 5.4 38 111-148 319-364 (655)
322 PF00448 SRP54: SRP54-type pro 33.5 2.2E+02 0.0047 21.7 7.8 60 79-148 76-135 (196)
323 PLN02840 tRNA dimethylallyltra 33.3 2.1E+02 0.0046 25.0 6.8 77 57-136 19-119 (421)
324 KOG2872 Uroporphyrinogen decar 32.7 50 0.0011 26.7 2.8 31 57-95 251-281 (359)
325 PF09314 DUF1972: Domain of un 32.0 2.2E+02 0.0049 21.5 6.6 85 61-146 6-112 (185)
326 COG0331 FabD (acyl-carrier-pro 32.0 62 0.0013 26.8 3.4 20 128-147 85-104 (310)
327 cd07199 Pat17_PNPLA8_PNPLA9_li 31.8 70 0.0015 25.5 3.7 18 131-148 37-54 (258)
328 cd07224 Pat_like Patatin-like 31.8 83 0.0018 24.7 4.0 20 129-148 30-49 (233)
329 TIGR03708 poly_P_AMP_trns poly 31.6 1.1E+02 0.0023 27.3 5.0 71 57-142 38-112 (493)
330 PRK13256 thiopurine S-methyltr 31.6 53 0.0012 25.7 2.9 29 61-95 46-74 (226)
331 TIGR03569 NeuB_NnaB N-acetylne 31.4 3E+02 0.0064 23.2 7.2 79 57-146 132-213 (329)
332 PF03976 PPK2: Polyphosphate k 31.3 21 0.00046 27.9 0.7 73 57-144 29-105 (228)
333 PF05724 TPMT: Thiopurine S-me 31.3 55 0.0012 25.4 2.9 31 59-95 38-68 (218)
334 KOG4231 Intracellular membrane 31.3 55 0.0012 28.9 3.1 54 81-147 411-469 (763)
335 PRK12595 bifunctional 3-deoxy- 31.2 2.4E+02 0.0051 24.1 6.8 74 57-138 224-299 (360)
336 PF03205 MobB: Molybdopterin g 30.6 77 0.0017 22.5 3.4 45 60-104 1-46 (140)
337 PF12242 Eno-Rase_NADH_b: NAD( 30.5 81 0.0017 19.7 2.9 40 110-149 18-61 (78)
338 PRK05665 amidotransferase; Pro 30.5 1.2E+02 0.0026 24.0 4.7 38 109-146 71-108 (240)
339 cd03818 GT1_ExpC_like This fam 30.4 75 0.0016 27.2 3.9 38 61-101 2-39 (396)
340 PF11713 Peptidase_C80: Peptid 30.4 37 0.0008 24.8 1.7 61 92-152 59-133 (157)
341 COG0324 MiaA tRNA delta(2)-iso 29.9 3.3E+02 0.0071 22.7 7.1 76 59-137 3-102 (308)
342 PF02590 SPOUT_MTase: Predicte 29.6 94 0.002 22.6 3.7 44 85-139 66-110 (155)
343 PRK10162 acetyl esterase; Prov 29.5 1.3E+02 0.0028 24.9 5.0 67 57-125 247-315 (318)
344 COG0505 CarA Carbamoylphosphat 29.2 1.6E+02 0.0034 24.9 5.2 64 77-146 192-267 (368)
345 PF13207 AAA_17: AAA domain; P 29.0 45 0.00097 22.6 2.0 37 61-100 1-40 (121)
346 COG5023 Tubulin [Cytoskeleton] 28.9 1.7E+02 0.0037 24.8 5.3 55 111-173 109-172 (443)
347 PF10686 DUF2493: Protein of u 28.9 47 0.001 20.4 1.8 32 57-92 30-63 (71)
348 COG0482 TrmU Predicted tRNA(5- 28.8 1.4E+02 0.0031 25.2 4.9 67 57-133 3-69 (356)
349 PLN02733 phosphatidylcholine-s 28.1 41 0.00089 29.4 1.9 52 264-319 370-421 (440)
350 PF03575 Peptidase_S51: Peptid 27.8 42 0.0009 24.3 1.7 24 119-142 59-82 (154)
351 KOG2170 ATPase of the AAA+ sup 27.7 62 0.0013 26.6 2.6 20 56-75 107-126 (344)
352 TIGR02883 spore_cwlD N-acetylm 27.6 1.8E+02 0.0039 21.9 5.1 37 89-126 2-39 (189)
353 cd01983 Fer4_NifH The Fer4_Nif 27.5 94 0.002 19.5 3.3 26 68-93 9-34 (99)
354 COG0279 GmhA Phosphoheptose is 27.3 95 0.002 22.9 3.2 73 62-140 44-121 (176)
355 PF00862 Sucrose_synth: Sucros 27.2 1.6E+02 0.0034 26.4 5.0 39 110-148 382-422 (550)
356 COG1576 Uncharacterized conser 27.0 1.8E+02 0.0038 21.2 4.5 56 78-146 60-116 (155)
357 cd07213 Pat17_PNPLA8_PNPLA9_li 26.9 59 0.0013 26.5 2.6 17 131-147 37-53 (288)
358 PRK07053 glutamine amidotransf 26.9 3.2E+02 0.0069 21.5 7.2 33 114-146 68-100 (234)
359 PF01734 Patatin: Patatin-like 26.7 62 0.0013 23.9 2.6 19 128-146 27-45 (204)
360 KOG2316 Predicted ATPase (PP-l 26.7 65 0.0014 24.9 2.5 67 78-146 55-122 (277)
361 PF03033 Glyco_transf_28: Glyc 26.6 47 0.001 23.1 1.8 33 61-94 2-34 (139)
362 COG1832 Predicted CoA-binding 26.6 92 0.002 22.1 3.0 35 61-95 18-52 (140)
363 cd07217 Pat17_PNPLA8_PNPLA9_li 26.4 62 0.0013 27.3 2.6 17 131-147 44-60 (344)
364 cd07230 Pat_TGL4-5_like Triacy 26.2 1.2E+02 0.0025 26.5 4.3 20 128-147 101-120 (421)
365 COG1092 Predicted SAM-dependen 25.8 2.1E+02 0.0045 24.8 5.5 58 79-140 281-341 (393)
366 PRK00103 rRNA large subunit me 25.7 1.7E+02 0.0036 21.4 4.4 52 79-142 61-113 (157)
367 cd07208 Pat_hypo_Ecoli_yjju_li 25.5 1.3E+02 0.0028 24.2 4.2 19 130-148 29-47 (266)
368 PRK07933 thymidylate kinase; V 25.5 1.1E+02 0.0025 23.5 3.8 40 61-100 2-42 (213)
369 TIGR00246 tRNA_RlmH_YbeA rRNA 25.4 1.4E+02 0.0031 21.7 4.0 46 87-143 66-111 (153)
370 cd07232 Pat_PLPL Patain-like p 24.9 1.3E+02 0.0028 26.1 4.3 20 128-147 95-114 (407)
371 COG1763 MobB Molybdopterin-gua 24.4 97 0.0021 22.7 3.0 39 60-98 3-42 (161)
372 cd07231 Pat_SDP1-like Sugar-De 24.4 1.5E+02 0.0032 24.7 4.3 20 128-147 96-115 (323)
373 PRK06171 sorbitol-6-phosphate 24.0 1.5E+02 0.0033 23.4 4.5 33 61-96 11-43 (266)
374 PRK08762 molybdopterin biosynt 24.0 4.6E+02 0.01 22.4 8.1 32 128-173 136-168 (376)
375 TIGR03607 patatin-related prot 23.7 1.9E+02 0.0042 27.4 5.3 36 112-147 47-85 (739)
376 cd07229 Pat_TGL3_like Triacylg 23.7 1.4E+02 0.003 25.7 4.1 20 128-147 111-130 (391)
377 PF06564 YhjQ: YhjQ protein; 23.5 92 0.002 24.7 2.9 35 61-95 3-39 (243)
378 cd01520 RHOD_YbbB Member of th 23.2 97 0.0021 21.4 2.8 33 56-93 85-118 (128)
379 PHA02519 plasmid partition pro 23.1 1.4E+02 0.003 25.7 4.1 25 76-100 125-150 (387)
380 PRK00889 adenylylsulfate kinas 23.1 1.3E+02 0.0027 22.2 3.5 37 58-94 3-40 (175)
381 cd01819 Patatin_and_cPLA2 Pata 23.0 2.4E+02 0.0051 20.4 4.9 19 128-146 28-46 (155)
382 PF00091 Tubulin: Tubulin/FtsZ 23.0 2.5E+02 0.0055 21.6 5.3 29 114-142 106-138 (216)
383 PF03721 UDPG_MGDP_dh_N: UDP-g 22.9 1E+02 0.0022 23.2 3.0 30 62-95 3-32 (185)
384 PRK07313 phosphopantothenoylcy 22.9 3.4E+02 0.0073 20.4 6.3 60 58-123 113-179 (182)
385 PF09419 PGP_phosphatase: Mito 22.7 3.3E+02 0.0071 20.2 5.6 52 82-138 36-88 (168)
386 PF13380 CoA_binding_2: CoA bi 22.7 1.2E+02 0.0027 20.6 3.1 34 63-96 4-37 (116)
387 PF01012 ETF: Electron transfe 22.6 2.7E+02 0.0059 20.2 5.2 62 78-149 50-113 (164)
388 COG2876 AroA 3-deoxy-D-arabino 22.5 2.1E+02 0.0046 23.0 4.6 41 56-97 150-190 (286)
389 cd01301 rDP_like renal dipepti 22.4 3.2E+02 0.007 22.7 6.0 75 58-139 188-267 (309)
390 cd02033 BchX Chlorophyllide re 22.3 1.3E+02 0.0029 25.2 3.7 38 57-94 29-67 (329)
391 PRK13230 nitrogenase reductase 22.1 95 0.0021 25.1 2.9 40 60-100 3-43 (279)
392 PF03610 EIIA-man: PTS system 21.9 2.6E+02 0.0057 18.8 7.0 72 60-146 2-76 (116)
393 cd07216 Pat17_PNPLA8_PNPLA9_li 21.8 64 0.0014 26.6 1.9 16 131-146 45-60 (309)
394 KOG2182 Hydrolytic enzymes of 21.8 1.3E+02 0.0028 26.6 3.6 59 259-319 432-501 (514)
395 cd06143 PAN2_exo DEDDh 3'-5' e 21.7 1.2E+02 0.0026 22.6 3.0 17 125-141 98-114 (174)
396 cd07206 Pat_TGL3-4-5_SDP1 Tria 21.6 1.8E+02 0.0039 24.0 4.3 20 128-147 97-116 (298)
397 PTZ00059 dynein light chain; P 21.6 1.5E+02 0.0032 19.2 3.2 31 112-142 37-68 (90)
398 cd01523 RHOD_Lact_B Member of 21.6 98 0.0021 20.0 2.5 28 57-89 61-88 (100)
399 cd01521 RHOD_PspE2 Member of t 21.4 1.7E+02 0.0036 19.5 3.6 35 56-93 63-97 (110)
400 PLN03058 dynein light chain ty 21.3 1.2E+02 0.0025 21.3 2.7 35 110-144 67-102 (128)
401 PRK05579 bifunctional phosphop 21.2 5.5E+02 0.012 22.3 7.9 75 58-135 116-196 (399)
402 PRK13529 malate dehydrogenase; 20.8 1.2E+02 0.0025 27.6 3.2 85 60-148 296-403 (563)
403 KOG1502 Flavonol reductase/cin 20.8 1E+02 0.0022 25.7 2.7 32 58-92 5-36 (327)
404 cd04951 GT1_WbdM_like This fam 20.7 4.3E+02 0.0092 21.8 6.7 35 61-96 3-39 (360)
405 PLN02752 [acyl-carrier protein 20.5 87 0.0019 26.3 2.4 17 131-147 127-143 (343)
406 COG1255 Uncharacterized protei 20.5 78 0.0017 21.7 1.7 19 77-95 27-45 (129)
407 PF06792 UPF0261: Uncharacteri 20.4 2.1E+02 0.0046 24.7 4.6 43 57-100 183-225 (403)
408 PRK00091 miaA tRNA delta(2)-is 20.3 3.2E+02 0.0069 22.7 5.5 72 59-133 4-99 (307)
409 PRK13255 thiopurine S-methyltr 20.2 1.3E+02 0.0029 23.3 3.2 15 80-94 53-67 (218)
410 PF05577 Peptidase_S28: Serine 20.2 1.1E+02 0.0025 26.6 3.2 41 261-303 377-417 (434)
411 TIGR03708 poly_P_AMP_trns poly 20.2 2.2E+02 0.0047 25.5 4.7 68 57-139 297-368 (493)
No 1
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=7.2e-36 Score=243.22 Aligned_cols=256 Identities=16% Similarity=0.227 Sum_probs=169.5
Q ss_pred eeEEEeCCCC-----ceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCC
Q 020741 26 TRVSHQLPSG-----LNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGES 100 (322)
Q Consensus 26 ~~~~~~~~~g-----~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S 100 (322)
..+++.. +| .+|+|...|.+ ++|+|||+||++++...|. .+++.|+++||+|+++|+||||.|
T Consensus 20 ~~~~~~~-~~~~~~~~~i~y~~~G~~----------~~~~lvliHG~~~~~~~w~-~~~~~L~~~gy~vi~~Dl~G~G~S 87 (302)
T PRK00870 20 APHYVDV-DDGDGGPLRMHYVDEGPA----------DGPPVLLLHGEPSWSYLYR-KMIPILAAAGHRVIAPDLIGFGRS 87 (302)
T ss_pred CceeEee-cCCCCceEEEEEEecCCC----------CCCEEEEECCCCCchhhHH-HHHHHHHhCCCEEEEECCCCCCCC
Confidence 5567777 45 78999998854 5789999999999999997 899999888999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCC
Q 020741 101 DAPPGTVAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGN 178 (322)
Q Consensus 101 ~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~ 178 (322)
+.+.....++++++++|+.++++ .++ ++++++||||||.+++.+|.+ +|+ |.++|++++..+...
T Consensus 88 ~~~~~~~~~~~~~~a~~l~~~l~-~l~~~~v~lvGhS~Gg~ia~~~a~~------------~p~~v~~lvl~~~~~~~~~ 154 (302)
T PRK00870 88 DKPTRREDYTYARHVEWMRSWFE-QLDLTDVTLVCQDWGGLIGLRLAAE------------HPDRFARLVVANTGLPTGD 154 (302)
T ss_pred CCCCCcccCCHHHHHHHHHHHHH-HcCCCCEEEEEEChHHHHHHHHHHh------------ChhheeEEEEeCCCCCCcc
Confidence 87654335899999999999999 788 899999999999999999965 887 999999987433221
Q ss_pred Cc-c--hhhhhhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHH------------HHhhcCCCcccc
Q 020741 179 SG-L--VWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQE------------LMKESSRMPLFD 243 (322)
Q Consensus 179 ~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~ 243 (322)
.. . ........................ ......+....+.. ............
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (302)
T PRK00870 155 GPMPDAFWAWRAFSQYSPVLPVGRLVNGGT------------VRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDD 222 (302)
T ss_pred ccchHHHhhhhcccccCchhhHHHHhhccc------------cccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCC
Confidence 10 0 000000000000000000000000 00011111111100 000000000000
Q ss_pred hhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcC-ce---eEEecCCcccceeccchhhhHHHHHHHHhh
Q 020741 244 LRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG-VL---PVCVEGVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-~~---~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
............+.++++|+++|+|++|.+++... +.+.+.++ .+ +++++++||+++.|+| +++++.|.+||++
T Consensus 223 ~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p-~~~~~~l~~fl~~ 300 (302)
T PRK00870 223 PAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSG-EELAEAVLEFIRA 300 (302)
T ss_pred cchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhCh-HHHHHHHHHHHhc
Confidence 00000000113356899999999999999999766 77777764 44 7899999999999999 9999999999987
Q ss_pred h
Q 020741 320 L 320 (322)
Q Consensus 320 ~ 320 (322)
+
T Consensus 301 ~ 301 (302)
T PRK00870 301 T 301 (302)
T ss_pred C
Confidence 5
No 2
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=7.4e-36 Score=230.28 Aligned_cols=272 Identities=18% Similarity=0.232 Sum_probs=193.1
Q ss_pred CceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCC
Q 020741 24 GQTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAP 103 (322)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~ 103 (322)
..+..+++. +|++++|.+.|+. ++|.|+++||++.+..+|+ .+...|+.+||+|+++|+||+|.|+.+
T Consensus 21 ~~~hk~~~~-~gI~~h~~e~g~~----------~gP~illlHGfPe~wyswr-~q~~~la~~~~rviA~DlrGyG~Sd~P 88 (322)
T KOG4178|consen 21 AISHKFVTY-KGIRLHYVEGGPG----------DGPIVLLLHGFPESWYSWR-HQIPGLASRGYRVIAPDLRGYGFSDAP 88 (322)
T ss_pred hcceeeEEE-ccEEEEEEeecCC----------CCCEEEEEccCCccchhhh-hhhhhhhhcceEEEecCCCCCCCCCCC
Confidence 345566666 8899999999976 9999999999999999998 889999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcc
Q 020741 104 PGTVAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGL 181 (322)
Q Consensus 104 ~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~ 181 (322)
.....|++..++.|+..+|+ +++ ++++++||+||+++|+.+|. .+|+ |+++|+++..........
T Consensus 89 ~~~~~Yt~~~l~~di~~lld-~Lg~~k~~lvgHDwGaivaw~la~------------~~Perv~~lv~~nv~~~~p~~~~ 155 (322)
T KOG4178|consen 89 PHISEYTIDELVGDIVALLD-HLGLKKAFLVGHDWGAIVAWRLAL------------FYPERVDGLVTLNVPFPNPKLKP 155 (322)
T ss_pred CCcceeeHHHHHHHHHHHHH-HhccceeEEEeccchhHHHHHHHH------------hChhhcceEEEecCCCCCcccch
Confidence 98778999999999999999 899 99999999999999999994 4998 999999987654111111
Q ss_pred hh--------h---hhhccchhhhHHH-----HHHhHhhhccccc--ccccc---ccCCccchHHHHHHHHHHhhcCCCc
Q 020741 182 VW--------R---YLFTKPIAAFKVT-----RSLAAKAFQTDLS--LCKET---FFSSSMEDHLVLRYQELMKESSRMP 240 (322)
Q Consensus 182 ~~--------~---~~~~~~~~~~~~~-----~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (322)
.. . .....+....... .......+..... ..... .-......+.++.+...+...+...
T Consensus 156 ~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~g 235 (322)
T KOG4178|consen 156 LDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTG 235 (322)
T ss_pred hhhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccc
Confidence 00 0 0011111111000 0000000000000 00000 0011245666676666664444333
Q ss_pred cc-chhhhhcCC--CCCCCCCccccEEEEeeCCCCccChh-hHHHHhhhcC--ceeEEecCCcccceeccchhhhHHHHH
Q 020741 241 LF-DLRKLNASL--PVPSVPKSSIKVLVLGAKDDFIVDAQ-GLSETGSFYG--VLPVCVEGVAHDMMLDCSWEKGASVIL 314 (322)
Q Consensus 241 ~~-~~~~~~~~~--~~~~~~~~~~Pvl~i~g~~D~~~~~~-~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~~i~ 314 (322)
.. .++.+.... ....+.++++|+++|+|+.|.+.+.. ....+.+.++ .+.++++|+||+++.|+| +++++.|.
T Consensus 236 plNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p-~~v~~~i~ 314 (322)
T KOG4178|consen 236 PLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKP-QEVNQAIL 314 (322)
T ss_pred cchhhHHHhhCchhccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCH-HHHHHHHH
Confidence 33 344444443 24556789999999999999999966 3444444444 578899999999999999 99999999
Q ss_pred HHHhhhc
Q 020741 315 SWLDGLR 321 (322)
Q Consensus 315 ~fl~~~~ 321 (322)
+||++.+
T Consensus 315 ~f~~~~~ 321 (322)
T KOG4178|consen 315 GFINSFS 321 (322)
T ss_pred HHHHhhc
Confidence 9999865
No 3
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2.4e-35 Score=239.48 Aligned_cols=268 Identities=20% Similarity=0.212 Sum_probs=174.7
Q ss_pred CCceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCC
Q 020741 23 QGQTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDA 102 (322)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~ 102 (322)
+..+..+++. +|.+++|...|+ ++++|||+||+++++..|. .+++.|+++ |+|+++|+||||.|+.
T Consensus 6 ~~~~~~~~~~-~~~~i~y~~~G~-----------~~~~vlllHG~~~~~~~w~-~~~~~L~~~-~~vi~~DlpG~G~S~~ 71 (294)
T PLN02824 6 PQVETRTWRW-KGYNIRYQRAGT-----------SGPALVLVHGFGGNADHWR-KNTPVLAKS-HRVYAIDLLGYGYSDK 71 (294)
T ss_pred CCCCCceEEE-cCeEEEEEEcCC-----------CCCeEEEECCCCCChhHHH-HHHHHHHhC-CeEEEEcCCCCCCCCC
Confidence 3445667777 899999999883 3479999999999999997 789999887 8999999999999987
Q ss_pred CCC-----CCCCCHHHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCC
Q 020741 103 PPG-----TVAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPP 175 (322)
Q Consensus 103 ~~~-----~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~ 175 (322)
+.. ...++++++++|+.++|+ .++ ++++|+||||||.+++.+|.+ +|+ |+++|++++...
T Consensus 72 ~~~~~~~~~~~~~~~~~a~~l~~~l~-~l~~~~~~lvGhS~Gg~va~~~a~~------------~p~~v~~lili~~~~~ 138 (294)
T PLN02824 72 PNPRSAPPNSFYTFETWGEQLNDFCS-DVVGDPAFVICNSVGGVVGLQAAVD------------APELVRGVMLINISLR 138 (294)
T ss_pred CccccccccccCCHHHHHHHHHHHHH-HhcCCCeEEEEeCHHHHHHHHHHHh------------ChhheeEEEEECCCcc
Confidence 642 125899999999999999 666 999999999999999999955 888 999999997542
Q ss_pred CCCCc---chhhhhhc--cchhh-hHHHHHHhHhhhc--cccccccccccC-CccchHHHHHHHHHHhhcCCCcccchhh
Q 020741 176 SGNSG---LVWRYLFT--KPIAA-FKVTRSLAAKAFQ--TDLSLCKETFFS-SSMEDHLVLRYQELMKESSRMPLFDLRK 246 (322)
Q Consensus 176 ~~~~~---~~~~~~~~--~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (322)
..... ........ ..... ............. .........+.. ....++....+..... .......+..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 216 (294)
T PLN02824 139 GLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGL--EPGAVDVFLD 216 (294)
T ss_pred cccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccC--CchHHHHHHH
Confidence 21110 00000000 00000 0000000000000 000000000000 1112222221111000 0000000111
Q ss_pred hhc----CCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcC-ceeEEecCCcccceeccchhhhHHHHHHHHhhh
Q 020741 247 LNA----SLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG-VLPVCVEGVAHDMMLDCSWEKGASVILSWLDGL 320 (322)
Q Consensus 247 ~~~----~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 320 (322)
+.. ......+.++++|+|+|+|++|.+++.+.++.+.+..+ .++++++++||+++.|+| +++.+.|.+||+++
T Consensus 217 ~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p-~~~~~~i~~fl~~~ 294 (294)
T PLN02824 217 FISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAP-ELVNPLIESFVARH 294 (294)
T ss_pred HhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCH-HHHHHHHHHHHhcC
Confidence 110 01123457899999999999999999998888877775 899999999999999999 99999999999864
No 4
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.6e-34 Score=234.81 Aligned_cols=263 Identities=19% Similarity=0.262 Sum_probs=172.0
Q ss_pred CCceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCC
Q 020741 23 QGQTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDA 102 (322)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~ 102 (322)
++.+..+++. +|.+++|...| ++++|||+||++++...|. .+++.|+++ ++|+++|+||||.|+.
T Consensus 5 ~~~~~~~~~~-~g~~i~y~~~G------------~g~~vvllHG~~~~~~~w~-~~~~~L~~~-~~via~D~~G~G~S~~ 69 (295)
T PRK03592 5 PPGEMRRVEV-LGSRMAYIETG------------EGDPIVFLHGNPTSSYLWR-NIIPHLAGL-GRCLAPDLIGMGASDK 69 (295)
T ss_pred CCCcceEEEE-CCEEEEEEEeC------------CCCEEEEECCCCCCHHHHH-HHHHHHhhC-CEEEEEcCCCCCCCCC
Confidence 3445566776 89999999988 5689999999999999997 789999888 6999999999999988
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCc
Q 020741 103 PPGTVAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSG 180 (322)
Q Consensus 103 ~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~ 180 (322)
+.. .++++++++|+.++++ .++ ++++++|||+||.+++.++.+ +|+ |+++|++++........
T Consensus 70 ~~~--~~~~~~~a~dl~~ll~-~l~~~~~~lvGhS~Gg~ia~~~a~~------------~p~~v~~lil~~~~~~~~~~~ 134 (295)
T PRK03592 70 PDI--DYTFADHARYLDAWFD-ALGLDDVVLVGHDWGSALGFDWAAR------------HPDRVRGIAFMEAIVRPMTWD 134 (295)
T ss_pred CCC--CCCHHHHHHHHHHHHH-HhCCCCeEEEEECHHHHHHHHHHHh------------ChhheeEEEEECCCCCCcchh
Confidence 765 5899999999999999 788 999999999999999999965 888 99999999743221110
Q ss_pred chhhhhhccchhhhHHHHH-H-hHhhh---ccccccccccccCCccchHHHHHHHHHHhhcCC-Ccccc-----------
Q 020741 181 LVWRYLFTKPIAAFKVTRS-L-AAKAF---QTDLSLCKETFFSSSMEDHLVLRYQELMKESSR-MPLFD----------- 243 (322)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~-~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----------- 243 (322)
....... ........ . ..... ..........+....+.++....+...+..... .....
T Consensus 135 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (295)
T PRK03592 135 DFPPAVR----ELFQALRSPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEP 210 (295)
T ss_pred hcchhHH----HHHHHHhCcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcc
Confidence 0000000 00000000 0 00000 000000000111112233333332221111000 00000
Q ss_pred --hhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHH-hhhc-CceeEEecCCcccceeccchhhhHHHHHHHHhh
Q 020741 244 --LRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSET-GSFY-GVLPVCVEGVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 244 --~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~-~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
..... ......+.++++|+|+|+|++|.++++....++ .+.. +.++++++++||+++.++| +++++.|.+|+++
T Consensus 211 ~~~~~~~-~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p-~~v~~~i~~fl~~ 288 (295)
T PRK03592 211 ADVVALV-EEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSP-EEIGAAIAAWLRR 288 (295)
T ss_pred hhhHhhh-hHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCH-HHHHHHHHHHHHH
Confidence 00000 001133567899999999999999955544444 4445 4899999999999999999 9999999999988
Q ss_pred hc
Q 020741 320 LR 321 (322)
Q Consensus 320 ~~ 321 (322)
+.
T Consensus 289 ~~ 290 (295)
T PRK03592 289 LR 290 (295)
T ss_pred hc
Confidence 65
No 5
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=2.9e-34 Score=230.89 Aligned_cols=258 Identities=16% Similarity=0.158 Sum_probs=170.3
Q ss_pred eEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCC
Q 020741 27 RVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGT 106 (322)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~ 106 (322)
.+++.+ +|.+++|...+.. ..+++|||+||++++...|. .+++.|.+. |+|+++|+||||.|+.+..
T Consensus 4 ~~~~~~-~~~~~~~~~~~~~---------~~~~plvllHG~~~~~~~w~-~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~- 70 (276)
T TIGR02240 4 FRTIDL-DGQSIRTAVRPGK---------EGLTPLLIFNGIGANLELVF-PFIEALDPD-LEVIAFDVPGVGGSSTPRH- 70 (276)
T ss_pred EEEecc-CCcEEEEEEecCC---------CCCCcEEEEeCCCcchHHHH-HHHHHhccC-ceEEEECCCCCCCCCCCCC-
Confidence 356667 8889999886422 25579999999999999997 889999764 9999999999999987654
Q ss_pred CCCCHHHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcchhh
Q 020741 107 VAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVWR 184 (322)
Q Consensus 107 ~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~~ 184 (322)
.++++++++++.++++ .++ ++++|+||||||.+++.+|.+ +|+ |+++|++++............
T Consensus 71 -~~~~~~~~~~~~~~i~-~l~~~~~~LvG~S~GG~va~~~a~~------------~p~~v~~lvl~~~~~~~~~~~~~~~ 136 (276)
T TIGR02240 71 -PYRFPGLAKLAARMLD-YLDYGQVNAIGVSWGGALAQQFAHD------------YPERCKKLILAATAAGAVMVPGKPK 136 (276)
T ss_pred -cCcHHHHHHHHHHHHH-HhCcCceEEEEECHHHHHHHHHHHH------------CHHHhhheEEeccCCccccCCCchh
Confidence 5799999999999999 777 899999999999999999965 888 999999998653211110000
Q ss_pred hhhccchhhhHHHHHHhHhhh--ccccccccccccCCccchHHHHHHHHHHhhcCCCcc-cchhhhhcCCCCCCCCCccc
Q 020741 185 YLFTKPIAAFKVTRSLAAKAF--QTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPL-FDLRKLNASLPVPSVPKSSI 261 (322)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 261 (322)
........ . ....... ..........+ . ..++....+............ ..............+.++++
T Consensus 137 ~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 208 (276)
T TIGR02240 137 VLMMMASP-R----RYIQPSHGIHIAPDIYGGAF-R--RDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQ 208 (276)
T ss_pred HHHHhcCc-h----hhhccccccchhhhhcccee-e--ccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCC
Confidence 00000000 0 0000000 00000000000 0 011111111111111000000 00000011112234678999
Q ss_pred cEEEEeeCCCCccChhhHHHHhhhcC-ceeEEecCCcccceeccchhhhHHHHHHHHhhhc
Q 020741 262 KVLVLGAKDDFIVDAQGLSETGSFYG-VLPVCVEGVAHDMMLDCSWEKGASVILSWLDGLR 321 (322)
Q Consensus 262 Pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 321 (322)
|+|+|+|++|++++++..+.+.+.++ ++++++++ ||+++.+.| +++++.|.+|+++.+
T Consensus 209 P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~-gH~~~~e~p-~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 209 PTLVLAGDDDPIIPLINMRLLAWRIPNAELHIIDD-GHLFLITRA-EAVAPIIMKFLAEER 267 (276)
T ss_pred CEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEcC-CCchhhccH-HHHHHHHHHHHHHhh
Confidence 99999999999999999998888775 89999986 999999999 999999999998754
No 6
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=1.6e-33 Score=233.51 Aligned_cols=265 Identities=18% Similarity=0.196 Sum_probs=168.4
Q ss_pred eeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCC
Q 020741 26 TRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPG 105 (322)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~ 105 (322)
.+.++..++|.+|+|..|+|. +.+.+++|||+||++++...|...+++.|+++||+|+++|+||||.|+....
T Consensus 62 ~~~~~~~~~g~~l~~~~~~p~-------~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~ 134 (349)
T PLN02385 62 EESYEVNSRGVEIFSKSWLPE-------NSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHG 134 (349)
T ss_pred eeeeEEcCCCCEEEEEEEecC-------CCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC
Confidence 445666779999999999975 1235688999999988766543378899988899999999999999987543
Q ss_pred CCCCCHHHHHHHHHHHHHHhC-----C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCC
Q 020741 106 TVAGSLQTHAGDVADFIQKNL-----S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGN 178 (322)
Q Consensus 106 ~~~~~~~~~~~dl~~~l~~~~-----~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~ 178 (322)
...+++++++|+.++++... . .+++|+||||||++++.++.+ +|+ +.++|++++......
T Consensus 135 -~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~------------~p~~v~glVLi~p~~~~~~ 201 (349)
T PLN02385 135 -YIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLK------------QPNAWDGAILVAPMCKIAD 201 (349)
T ss_pred -CcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHh------------CcchhhheeEecccccccc
Confidence 23588999999999987321 1 379999999999999999954 888 999999997543211
Q ss_pred CcchhhhhhccchhhhHHHHHHhHhhhcccc----ccccccccCCccchHHHHHHHHHHhhcCCCcccchhh-hhc-CCC
Q 020741 179 SGLVWRYLFTKPIAAFKVTRSLAAKAFQTDL----SLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRK-LNA-SLP 252 (322)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~ 252 (322)
........ .... ........... ......++... .......+.. .............. +.. ...
T Consensus 202 ~~~~~~~~-------~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~ 271 (349)
T PLN02385 202 DVVPPPLV-------LQIL-ILLANLLPKAKLVPQKDLAELAFRDL-KKRKMAEYNV-IAYKDKPRLRTAVELLRTTQEI 271 (349)
T ss_pred cccCchHH-------HHHH-HHHHHHCCCceecCCCccccccccCH-HHHHHhhcCc-ceeCCCcchHHHHHHHHHHHHH
Confidence 10000000 0000 00000000000 00000000000 0000000000 00000000000000 000 011
Q ss_pred CCCCCCccccEEEEeeCCCCccChhhHHHHhhhc---CceeEEecCCcccceeccchhh----hHHHHHHHHhhhc
Q 020741 253 VPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFY---GVLPVCVEGVAHDMMLDCSWEK----GASVILSWLDGLR 321 (322)
Q Consensus 253 ~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~~~~~~----~~~~i~~fl~~~~ 321 (322)
...+.++++|+|+|+|++|.+++++.++.+.+.+ ++++++++++||+++.+.| ++ +++.|.+||+++.
T Consensus 272 ~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p-~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 272 EMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEP-DEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred HHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCC-hhhHHHHHHHHHHHHHHhc
Confidence 2345679999999999999999999999888875 3899999999999999888 55 8889999998753
No 7
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=1.8e-33 Score=223.58 Aligned_cols=239 Identities=17% Similarity=0.256 Sum_probs=156.7
Q ss_pred cEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--CCcEEEEech
Q 020741 60 PLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS--LPPVLLGHSF 137 (322)
Q Consensus 60 ~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~--~~~~lvG~S~ 137 (322)
.|||+||++.+...|. .+++.|.+.||+|+++|+||||.|+.+.. ..++++++++|+.++++ .++ ++++++||||
T Consensus 5 ~vvllHG~~~~~~~w~-~~~~~L~~~~~~via~Dl~G~G~S~~~~~-~~~~~~~~a~dl~~~l~-~l~~~~~~~lvGhSm 81 (255)
T PLN02965 5 HFVFVHGASHGAWCWY-KLATLLDAAGFKSTCVDLTGAGISLTDSN-TVSSSDQYNRPLFALLS-DLPPDHKVILVGHSI 81 (255)
T ss_pred EEEEECCCCCCcCcHH-HHHHHHhhCCceEEEecCCcCCCCCCCcc-ccCCHHHHHHHHHHHHH-hcCCCCCEEEEecCc
Confidence 4999999999999997 88999987889999999999999976543 24789999999999999 676 4999999999
Q ss_pred hHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcchhhhhhccchhhhHHHHHH-hHhhhcccc------
Q 020741 138 GGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSL-AAKAFQTDL------ 209 (322)
Q Consensus 138 Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------ 209 (322)
||.+++.++.+ +|+ |+++|++++.................. ........ .........
T Consensus 82 GG~ia~~~a~~------------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 147 (255)
T PLN02965 82 GGGSVTEALCK------------FTDKISMAIYVAAAMVKPGSIISPRLKNVME--GTEKIWDYTFGEGPDKPPTGIMMK 147 (255)
T ss_pred chHHHHHHHHh------------CchheeEEEEEccccCCCCCCccHHHHhhhh--ccccceeeeeccCCCCCcchhhcC
Confidence 99999999955 888 999999998642211110000000000 00000000 000000000
Q ss_pred -ccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcC-
Q 020741 210 -SLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG- 287 (322)
Q Consensus 210 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~- 287 (322)
......++.. ...+........+...... .+.... .....+..+++|+++|+|++|.++|++..+.+.+.++
T Consensus 148 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~ 221 (255)
T PLN02965 148 PEFVRHYYYNQ-SPLEDYTLSSKLLRPAPVR---AFQDLD--KLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPP 221 (255)
T ss_pred HHHHHHHHhcC-CCHHHHHHHHHhcCCCCCc---chhhhh--hccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCc
Confidence 0000000010 1111111111111111110 111111 1122345789999999999999999999999998885
Q ss_pred ceeEEecCCcccceeccchhhhHHHHHHHHhhhcC
Q 020741 288 VLPVCVEGVAHDMMLDCSWEKGASVILSWLDGLRR 322 (322)
Q Consensus 288 ~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~~ 322 (322)
+++++++++||+++.|+| +++++.|.+|++.++|
T Consensus 222 a~~~~i~~~GH~~~~e~p-~~v~~~l~~~~~~~~~ 255 (255)
T PLN02965 222 AQTYVLEDSDHSAFFSVP-TTLFQYLLQAVSSLQR 255 (255)
T ss_pred ceEEEecCCCCchhhcCH-HHHHHHHHHHHHHhcC
Confidence 899999999999999999 9999999999999876
No 8
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=1.6e-32 Score=225.46 Aligned_cols=268 Identities=14% Similarity=0.184 Sum_probs=171.4
Q ss_pred eEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCC-
Q 020741 27 RVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPG- 105 (322)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~- 105 (322)
+..+...||.+++|..+++. ..+++||++||++++...|. .++..|.++||+|+++|+||||.|.....
T Consensus 32 ~~~~~~~~g~~l~~~~~~~~---------~~~~~vll~HG~~~~~~~y~-~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~ 101 (330)
T PRK10749 32 EAEFTGVDDIPIRFVRFRAP---------HHDRVVVICPGRIESYVKYA-ELAYDLFHLGYDVLIIDHRGQGRSGRLLDD 101 (330)
T ss_pred ceEEEcCCCCEEEEEEccCC---------CCCcEEEEECCccchHHHHH-HHHHHHHHCCCeEEEEcCCCCCCCCCCCCC
Confidence 34555669999999999864 36679999999998888886 78888888999999999999999976432
Q ss_pred ---CCCCCHHHHHHHHHHHHHHhC---C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCC
Q 020741 106 ---TVAGSLQTHAGDVADFIQKNL---S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSG 177 (322)
Q Consensus 106 ---~~~~~~~~~~~dl~~~l~~~~---~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~ 177 (322)
...++++++++|+.++++... + .+++++||||||.+++.++.+ +|+ ++++|++++.....
T Consensus 102 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~------------~p~~v~~lvl~~p~~~~~ 169 (330)
T PRK10749 102 PHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQR------------HPGVFDAIALCAPMFGIV 169 (330)
T ss_pred CCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHh------------CCCCcceEEEECchhccC
Confidence 123589999999999998431 4 789999999999999999954 888 89999998753221
Q ss_pred CCcchhhhhhccchhhhHHHHHH--hHhhhccc-cccccccccCCc--cchHHHHHHHHHHhhcCCC-----cccchhhh
Q 020741 178 NSGLVWRYLFTKPIAAFKVTRSL--AAKAFQTD-LSLCKETFFSSS--MEDHLVLRYQELMKESSRM-----PLFDLRKL 247 (322)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 247 (322)
........ . .. ....... ........ .......+.... ...+....+...+...+.. ........
T Consensus 170 ~~~~~~~~--~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (330)
T PRK10749 170 LPLPSWMA--R-RI--LNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRES 244 (330)
T ss_pred CCCCcHHH--H-HH--HHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHH
Confidence 11100000 0 00 0000000 00000000 000000000000 1122222222222222211 00000111
Q ss_pred hc--CCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhc--------CceeEEecCCcccceeccc--hhhhHHHHHH
Q 020741 248 NA--SLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFY--------GVLPVCVEGVAHDMMLDCS--WEKGASVILS 315 (322)
Q Consensus 248 ~~--~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~--------~~~~~~~~~~gH~~~~~~~--~~~~~~~i~~ 315 (322)
.. ......+.++++|+|+|+|++|.+++++.++.+.+.+ ++++++++|+||.++.|.+ ++.+.+.|.+
T Consensus 245 ~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~ 324 (330)
T PRK10749 245 ILAGEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVD 324 (330)
T ss_pred HHHHHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHH
Confidence 00 0112345688999999999999999999888777654 2589999999999999876 6889999999
Q ss_pred HHhhhc
Q 020741 316 WLDGLR 321 (322)
Q Consensus 316 fl~~~~ 321 (322)
||++++
T Consensus 325 fl~~~~ 330 (330)
T PRK10749 325 FFNRHN 330 (330)
T ss_pred HHhhcC
Confidence 998764
No 9
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=9.5e-33 Score=228.95 Aligned_cols=269 Identities=24% Similarity=0.362 Sum_probs=167.2
Q ss_pred EEEeCCCCc-eEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCC
Q 020741 28 VSHQLPSGL-NIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGT 106 (322)
Q Consensus 28 ~~~~~~~g~-~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~ 106 (322)
+++.. +|. +++|...|+. ...+.+|+|||+||++++...|. .+++.|++ +|+|+++|+||||.|+.+..
T Consensus 64 ~~~~~-~g~~~i~Y~~~G~g------~~~~~gp~lvllHG~~~~~~~w~-~~~~~L~~-~~~via~Dl~G~G~S~~~~~- 133 (360)
T PLN02679 64 KKWKW-KGEYSINYLVKGSP------EVTSSGPPVLLVHGFGASIPHWR-RNIGVLAK-NYTVYAIDLLGFGASDKPPG- 133 (360)
T ss_pred ceEEE-CCceeEEEEEecCc------ccCCCCCeEEEECCCCCCHHHHH-HHHHHHhc-CCEEEEECCCCCCCCCCCCC-
Confidence 34555 455 9999998832 11124589999999999999997 78888976 59999999999999987643
Q ss_pred CCCCHHHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcchhh
Q 020741 107 VAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVWR 184 (322)
Q Consensus 107 ~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~~ 184 (322)
..++++++++++.++++ .++ ++++|+||||||.+++.++.. .+|+ |+++|++++............
T Consensus 134 ~~~~~~~~a~~l~~~l~-~l~~~~~~lvGhS~Gg~ia~~~a~~-----------~~P~rV~~LVLi~~~~~~~~~~~~~~ 201 (360)
T PLN02679 134 FSYTMETWAELILDFLE-EVVQKPTVLIGNSVGSLACVIAASE-----------STRDLVRGLVLLNCAGGMNNKAVVDD 201 (360)
T ss_pred ccccHHHHHHHHHHHHH-HhcCCCeEEEEECHHHHHHHHHHHh-----------cChhhcCEEEEECCccccccccccch
Confidence 25799999999999999 677 999999999999999988843 3677 999999997543211110000
Q ss_pred hhhc--cchh-hhHHH---HHHhHhhhcc------cccccccccc-CCccchHHHHHHHHHHhhcCCCcccchhhhhc--
Q 020741 185 YLFT--KPIA-AFKVT---RSLAAKAFQT------DLSLCKETFF-SSSMEDHLVLRYQELMKESSRMPLFDLRKLNA-- 249 (322)
Q Consensus 185 ~~~~--~~~~-~~~~~---~~~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 249 (322)
.... .+.. ..... .......+.. ........+. .....++....+....... .....+.....
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 279 (360)
T PLN02679 202 WRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDE--GALDAFVSIVTGP 279 (360)
T ss_pred HHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCC--ChHHHHHHHHhcC
Confidence 0000 0000 00000 0000000000 0000000000 0112222222221111000 00111111111
Q ss_pred --CCCCCCCCCccccEEEEeeCCCCccChhh-----HHHHhhhc-CceeEEecCCcccceeccchhhhHHHHHHHHhhhc
Q 020741 250 --SLPVPSVPKSSIKVLVLGAKDDFIVDAQG-----LSETGSFY-GVLPVCVEGVAHDMMLDCSWEKGASVILSWLDGLR 321 (322)
Q Consensus 250 --~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~-----~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 321 (322)
......+.++++|+|+|+|++|.++|.+. ...+.+.+ +.++++++++||+++.|+| +++++.|.+||+++.
T Consensus 280 ~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~P-e~~~~~I~~FL~~~~ 358 (360)
T PLN02679 280 PGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRP-DLVHEKLLPWLAQLP 358 (360)
T ss_pred CCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCH-HHHHHHHHHHHHhcC
Confidence 11123456899999999999999998763 23444544 5899999999999999999 999999999998753
No 10
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=9.5e-33 Score=231.68 Aligned_cols=272 Identities=14% Similarity=0.166 Sum_probs=168.1
Q ss_pred CCceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhh---CCceEEEeCCCCCCC
Q 020741 23 QGQTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFAD---SGFDCYAVSLLGQGE 99 (322)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~---~g~~v~~~D~~G~G~ 99 (322)
......+..+ +|.+++|...+|. ..+.+++|||+||++++...|.+.+.+.|++ ++|+|+++|+||||.
T Consensus 174 ~~~~~~~~~~-~~~~l~~~~~gp~-------~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~ 245 (481)
T PLN03087 174 CKFCTSWLSS-SNESLFVHVQQPK-------DNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGR 245 (481)
T ss_pred cceeeeeEee-CCeEEEEEEecCC-------CCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCC
Confidence 3445556666 6789999999976 1134689999999999999997445566653 679999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHH-HHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCC
Q 020741 100 SDAPPGTVAGSLQTHAGDVA-DFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPS 176 (322)
Q Consensus 100 S~~~~~~~~~~~~~~~~dl~-~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~ 176 (322)
|+.+.. ..++++++++++. .+++ .++ ++++++||||||.+++.+|.+ +|+ |+++|++++....
T Consensus 246 S~~p~~-~~ytl~~~a~~l~~~ll~-~lg~~k~~LVGhSmGG~iAl~~A~~------------~Pe~V~~LVLi~~~~~~ 311 (481)
T PLN03087 246 SPKPAD-SLYTLREHLEMIERSVLE-RYKVKSFHIVAHSLGCILALALAVK------------HPGAVKSLTLLAPPYYP 311 (481)
T ss_pred CcCCCC-CcCCHHHHHHHHHHHHHH-HcCCCCEEEEEECHHHHHHHHHHHh------------ChHhccEEEEECCCccc
Confidence 987643 3589999999995 7788 788 999999999999999999965 888 9999999875332
Q ss_pred CCCcch-hhhhh-----ccchhh---hHHHHHHhH---hhhc----ccccccc---ccccCCccchHHHHHHHHHHhhcC
Q 020741 177 GNSGLV-WRYLF-----TKPIAA---FKVTRSLAA---KAFQ----TDLSLCK---ETFFSSSMEDHLVLRYQELMKESS 237 (322)
Q Consensus 177 ~~~~~~-~~~~~-----~~~~~~---~~~~~~~~~---~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 237 (322)
...... ..... ...... ......... .... ....... ...............+... ..
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~---~~ 388 (481)
T PLN03087 312 VPKGVQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCH---TH 388 (481)
T ss_pred cccchhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhc---cc
Confidence 211110 00000 000000 000000000 0000 0000000 0000000000000000000 00
Q ss_pred CCcccchhhhhcC-------CCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcC-ceeEEecCCccccee-ccchhh
Q 020741 238 RMPLFDLRKLNAS-------LPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG-VLPVCVEGVAHDMML-DCSWEK 308 (322)
Q Consensus 238 ~~~~~~~~~~~~~-------~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~-~~~~~~ 308 (322)
......+..+... .......++++|+|+|+|++|.++|++..+.+.+.++ +++++++++||++++ ++| ++
T Consensus 389 ~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p-~~ 467 (481)
T PLN03087 389 NAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQ-KE 467 (481)
T ss_pred hhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCH-HH
Confidence 0000000000000 0001112689999999999999999999999988874 999999999999886 888 99
Q ss_pred hHHHHHHHHhhh
Q 020741 309 GASVILSWLDGL 320 (322)
Q Consensus 309 ~~~~i~~fl~~~ 320 (322)
+++.|.+|.+..
T Consensus 468 fa~~L~~F~~~~ 479 (481)
T PLN03087 468 FARELEEIWRRS 479 (481)
T ss_pred HHHHHHHHhhcc
Confidence 999999998753
No 11
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=4.8e-32 Score=218.91 Aligned_cols=260 Identities=16% Similarity=0.187 Sum_probs=169.8
Q ss_pred ceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCC
Q 020741 25 QTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPP 104 (322)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~ 104 (322)
...+++++ +|.+++|...|+. .+++|||+||++++...|. .+.+.|++ +|+|+++|+||||.|..+.
T Consensus 6 ~~~~~~~~-~~~~~~~~~~g~~----------~~~~vv~~hG~~~~~~~~~-~~~~~l~~-~~~vi~~D~~G~G~S~~~~ 72 (278)
T TIGR03056 6 DCSRRVTV-GPFHWHVQDMGPT----------AGPLLLLLHGTGASTHSWR-DLMPPLAR-SFRVVAPDLPGHGFTRAPF 72 (278)
T ss_pred CccceeeE-CCEEEEEEecCCC----------CCCeEEEEcCCCCCHHHHH-HHHHHHhh-CcEEEeecCCCCCCCCCcc
Confidence 34456666 8999999998865 6789999999999999997 78888876 5999999999999998765
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcc-
Q 020741 105 GTVAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGL- 181 (322)
Q Consensus 105 ~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~- 181 (322)
. ..++++.+++|+.++++ .++ ++++|+||||||.+++.++.+ +|+ +++++++++.........
T Consensus 73 ~-~~~~~~~~~~~l~~~i~-~~~~~~~~lvG~S~Gg~~a~~~a~~------------~p~~v~~~v~~~~~~~~~~~~~~ 138 (278)
T TIGR03056 73 R-FRFTLPSMAEDLSALCA-AEGLSPDGVIGHSAGAAIALRLALD------------GPVTPRMVVGINAALMPFEGMAG 138 (278)
T ss_pred c-cCCCHHHHHHHHHHHHH-HcCCCCceEEEECccHHHHHHHHHh------------CCcccceEEEEcCcccccccccc
Confidence 4 35799999999999999 677 899999999999999999955 787 899999987532111000
Q ss_pred -----hhhhhhccchhhhHHHHHHhHhhhccccccccccc--cCCccchHHHHHHHHHHhhcCC-Ccccc-hhhhhcCCC
Q 020741 182 -----VWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETF--FSSSMEDHLVLRYQELMKESSR-MPLFD-LRKLNASLP 252 (322)
Q Consensus 182 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~ 252 (322)
........... .......... ........ ............+......... ..... .........
T Consensus 139 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (278)
T TIGR03056 139 TLFPYMARVLACNPFT-----PPMMSRGAAD-QQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPL 212 (278)
T ss_pred cccchhhHhhhhcccc-----hHHHHhhccc-CcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccch
Confidence 00000000000 0000000000 00000000 0000111111111111100000 00000 000000111
Q ss_pred CCCCCCccccEEEEeeCCCCccChhhHHHHhhhc-CceeEEecCCcccceeccchhhhHHHHHHHHh
Q 020741 253 VPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFY-GVLPVCVEGVAHDMMLDCSWEKGASVILSWLD 318 (322)
Q Consensus 253 ~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 318 (322)
...++++++|+++|+|++|.+++.+..+.+.+.+ +.+++.++++||+++.+.| +++++.|.+|++
T Consensus 213 ~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p-~~~~~~i~~f~~ 278 (278)
T TIGR03056 213 NRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQA-DGVVGLILQAAE 278 (278)
T ss_pred hhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccCH-HHHHHHHHHHhC
Confidence 2345688999999999999999999888888877 4899999999999999999 999999999985
No 12
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=2.6e-31 Score=219.06 Aligned_cols=254 Identities=15% Similarity=0.168 Sum_probs=168.0
Q ss_pred CCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCC--CCCC
Q 020741 32 LPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPG--TVAG 109 (322)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~--~~~~ 109 (322)
..+|.+++|...|+. ++++|||+||++.+...|. .+++.|++ +|+|+++|+||||.|+.+.. ...+
T Consensus 111 ~~~~~~~~y~~~G~~----------~~~~ivllHG~~~~~~~w~-~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~y 178 (383)
T PLN03084 111 SSDLFRWFCVESGSN----------NNPPVLLIHGFPSQAYSYR-KVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNY 178 (383)
T ss_pred cCCceEEEEEecCCC----------CCCeEEEECCCCCCHHHHH-HHHHHHhc-CCEEEEECCCCCCCCCCCcccccccC
Confidence 458999999999865 6789999999999999997 78899976 69999999999999987654 1258
Q ss_pred CHHHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcchhhhhh
Q 020741 110 SLQTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVWRYLF 187 (322)
Q Consensus 110 ~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~~~~~ 187 (322)
+++++++++.++++ .++ ++++|+|||+||.+++.+|.+ +|+ |.++|++++...............
T Consensus 179 s~~~~a~~l~~~i~-~l~~~~~~LvG~s~GG~ia~~~a~~------------~P~~v~~lILi~~~~~~~~~~~p~~l~~ 245 (383)
T PLN03084 179 TLDEYVSSLESLID-ELKSDKVSLVVQGYFSPPVVKYASA------------HPDKIKKLILLNPPLTKEHAKLPSTLSE 245 (383)
T ss_pred CHHHHHHHHHHHHH-HhCCCCceEEEECHHHHHHHHHHHh------------ChHhhcEEEEECCCCccccccchHHHHH
Confidence 99999999999999 777 899999999999999999955 888 999999998643211000000000
Q ss_pred ccchhhhHHHHHHhH-hhhccccccccccccCCccchHHHHHHHHHHhhcCC-------------Ccccch-hhhhcCCC
Q 020741 188 TKPIAAFKVTRSLAA-KAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSR-------------MPLFDL-RKLNASLP 252 (322)
Q Consensus 188 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~-~~~~~~~~ 252 (322)
.... ....... ........... ........++....+...+..... .....+ ..+...
T Consensus 246 ~~~~----l~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~-- 318 (383)
T PLN03084 246 FSNF----LLGEIFSQDPLRASDKALT-SCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSI-- 318 (383)
T ss_pred HHHH----HhhhhhhcchHHHHhhhhc-ccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhh--
Confidence 0000 0000000 00000000000 000001112222222111100000 000000 000000
Q ss_pred CCCCCCccccEEEEeeCCCCccChhhHHHHhhhcCceeEEecCCcccceeccchhhhHHHHHHHHhh
Q 020741 253 VPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYGVLPVCVEGVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 253 ~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
.....+++|+|+|+|++|.+++.+..+.+.+..+.++++++++||+++.|.| +++++.|.+||.+
T Consensus 319 -l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~~~a~l~vIp~aGH~~~~E~P-e~v~~~I~~Fl~~ 383 (383)
T PLN03084 319 -LTDKNWKTPITVCWGLRDRWLNYDGVEDFCKSSQHKLIELPMAGHHVQEDCG-EELGGIISGILSK 383 (383)
T ss_pred -hccccCCCCEEEEeeCCCCCcCHHHHHHHHHhcCCeEEEECCCCCCcchhCH-HHHHHHHHHHhhC
Confidence 0013579999999999999999998888888778999999999999999999 9999999999863
No 13
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=1.3e-31 Score=215.76 Aligned_cols=257 Identities=14% Similarity=0.131 Sum_probs=166.3
Q ss_pred EEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCC
Q 020741 29 SHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVA 108 (322)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~ 108 (322)
++..+||.+|+|+.|.|. ...++.|+++||+++++..|. .+++.|.++||+|+++|+||||.|..... ..
T Consensus 4 ~~~~~~g~~l~~~~~~~~--------~~~~~~v~llHG~~~~~~~~~-~~~~~l~~~g~~via~D~~G~G~S~~~~~-~~ 73 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPI--------TYPKALVFISHGAGEHSGRYE-ELAENISSLGILVFSHDHIGHGRSNGEKM-MI 73 (276)
T ss_pred eeecCCCCEEEEEeccCC--------CCCCEEEEEeCCCccccchHH-HHHHHHHhCCCEEEEccCCCCCCCCCccC-Cc
Confidence 456669999999999864 134567777799999999997 89999999999999999999999976432 23
Q ss_pred CCHHHHHHHHHHHHHHh---CC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcchh
Q 020741 109 GSLQTHAGDVADFIQKN---LS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVW 183 (322)
Q Consensus 109 ~~~~~~~~dl~~~l~~~---~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~ 183 (322)
.++.++++|+.+.++.. .+ .+++|+|||+||.+++.+|.+ +|+ ++++|++++........ ..
T Consensus 74 ~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~------------~p~~i~~lil~~p~~~~~~~~-~~ 140 (276)
T PHA02857 74 DDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYK------------NPNLFTAMILMSPLVNAEAVP-RL 140 (276)
T ss_pred CCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHh------------CccccceEEEecccccccccc-HH
Confidence 46777888888877632 23 689999999999999999944 888 89999999854311100 00
Q ss_pred hhhhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcC--CCcccc-hhhhh--cCCCCCCCCC
Q 020741 184 RYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESS--RMPLFD-LRKLN--ASLPVPSVPK 258 (322)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~--~~~~~~~~~~ 258 (322)
..........+... ... ..+..................... ...... ..... .......+.+
T Consensus 141 -----------~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 207 (276)
T PHA02857 141 -----------NLLAAKLMGIFYPN-KIV-GKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPK 207 (276)
T ss_pred -----------HHHHHHHHHHhCCC-Ccc-CCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhccc
Confidence 00000000000000 000 000000000000000000000000 000000 00000 0111234568
Q ss_pred ccccEEEEeeCCCCccChhhHHHHhhhc--CceeEEecCCcccceeccc--hhhhHHHHHHHHhhhc
Q 020741 259 SSIKVLVLGAKDDFIVDAQGLSETGSFY--GVLPVCVEGVAHDMMLDCS--WEKGASVILSWLDGLR 321 (322)
Q Consensus 259 ~~~Pvl~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~--~~~~~~~i~~fl~~~~ 321 (322)
+++|+|+++|++|.++|++.+..+.+.+ ++++.+++++||.++.|.+ ++++++.+.+||++..
T Consensus 208 i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 208 IKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNRV 274 (276)
T ss_pred CCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999988876 3899999999999999976 6889999999998754
No 14
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=6.8e-32 Score=217.38 Aligned_cols=255 Identities=18% Similarity=0.267 Sum_probs=161.9
Q ss_pred ceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCC
Q 020741 25 QTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPP 104 (322)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~ 104 (322)
....++++ +|.+++|...| .+++|||+||++.+...|. .+.+.|.+. |+|+++|+||||.|+.+.
T Consensus 14 ~~~~~~~~-~~~~i~y~~~G------------~~~~iv~lHG~~~~~~~~~-~~~~~l~~~-~~vi~~D~~G~G~S~~~~ 78 (286)
T PRK03204 14 FESRWFDS-SRGRIHYIDEG------------TGPPILLCHGNPTWSFLYR-DIIVALRDR-FRCVAPDYLGFGLSERPS 78 (286)
T ss_pred ccceEEEc-CCcEEEEEECC------------CCCEEEEECCCCccHHHHH-HHHHHHhCC-cEEEEECCCCCCCCCCCC
Confidence 45677888 78899999888 4689999999998888997 788888764 999999999999998765
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcch
Q 020741 105 GTVAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLV 182 (322)
Q Consensus 105 ~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~ 182 (322)
. ..++.+++++++.++++ .++ ++++++||||||.+++.++.. +|+ |+++|++++..........
T Consensus 79 ~-~~~~~~~~~~~~~~~~~-~~~~~~~~lvG~S~Gg~va~~~a~~------------~p~~v~~lvl~~~~~~~~~~~~~ 144 (286)
T PRK03204 79 G-FGYQIDEHARVIGEFVD-HLGLDRYLSMGQDWGGPISMAVAVE------------RADRVRGVVLGNTWFWPADTLAM 144 (286)
T ss_pred c-cccCHHHHHHHHHHHHH-HhCCCCEEEEEECccHHHHHHHHHh------------ChhheeEEEEECccccCCCchhH
Confidence 3 24789999999999999 678 899999999999999999954 887 9999998764311110000
Q ss_pred --hh-hhhccchhhhHHHHHH-hHhhhccccccccccccCCccchHHHHHHHHHHhhcCC-C-------cccchhhhhcC
Q 020741 183 --WR-YLFTKPIAAFKVTRSL-AAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSR-M-------PLFDLRKLNAS 250 (322)
Q Consensus 183 --~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~ 250 (322)
.. ................ ....+.. ......+.+....+......... . ...........
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (286)
T PRK03204 145 KAFSRVMSSPPVQYAILRRNFFVERLIPA--------GTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLAR 216 (286)
T ss_pred HHHHHHhccccchhhhhhhhHHHHHhccc--------cccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHH
Confidence 00 0000000000000000 0000000 00011111111111100000000 0 00000000000
Q ss_pred CCCCCCC--CccccEEEEeeCCCCccChh-hHHHHhhhc-CceeEEecCCcccceeccchhhhHHHHHHHHh
Q 020741 251 LPVPSVP--KSSIKVLVLGAKDDFIVDAQ-GLSETGSFY-GVLPVCVEGVAHDMMLDCSWEKGASVILSWLD 318 (322)
Q Consensus 251 ~~~~~~~--~~~~Pvl~i~g~~D~~~~~~-~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 318 (322)
.. ..+. .+++|+++|+|++|.++++. ..+.+.+.+ +.++++++++||+++.|+| +++++.|.+|+.
T Consensus 217 ~~-~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~P-e~~~~~i~~~~~ 286 (286)
T PRK03204 217 LA-REVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAP-DRIAAAIIERFG 286 (286)
T ss_pred hh-hhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCH-HHHHHHHHHhcC
Confidence 00 0011 23899999999999988655 467777777 4999999999999999999 999999999973
No 15
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=3.6e-32 Score=216.53 Aligned_cols=236 Identities=17% Similarity=0.106 Sum_probs=148.5
Q ss_pred CCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEech
Q 020741 58 RPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLPPVLLGHSF 137 (322)
Q Consensus 58 ~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~lvG~S~ 137 (322)
.|+|||+||++++...|. .+++.|.+. |+|+++|+||||.|.... .++++++++++.+ ...++++++||||
T Consensus 13 ~~~ivllHG~~~~~~~w~-~~~~~L~~~-~~vi~~Dl~G~G~S~~~~---~~~~~~~~~~l~~----~~~~~~~lvGhS~ 83 (256)
T PRK10349 13 NVHLVLLHGWGLNAEVWR-CIDEELSSH-FTLHLVDLPGFGRSRGFG---ALSLADMAEAVLQ----QAPDKAIWLGWSL 83 (256)
T ss_pred CCeEEEECCCCCChhHHH-HHHHHHhcC-CEEEEecCCCCCCCCCCC---CCCHHHHHHHHHh----cCCCCeEEEEECH
Confidence 356999999999999997 789999876 999999999999998643 3677777776553 2238899999999
Q ss_pred hHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcchhhhhhccchhhh-HHHHHHhHhhhcccccccccc
Q 020741 138 GGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVWRYLFTKPIAAF-KVTRSLAAKAFQTDLSLCKET 215 (322)
Q Consensus 138 Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 215 (322)
||.+++.+|.+ +|+ |.++|++++.+.......... ......... ............... ...
T Consensus 84 Gg~ia~~~a~~------------~p~~v~~lili~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 147 (256)
T PRK10349 84 GGLVASQIALT------------HPERVQALVTVASSPCFSARDEWPG-IKPDVLAGFQQQLSDDFQRTVERFL---ALQ 147 (256)
T ss_pred HHHHHHHHHHh------------ChHhhheEEEecCccceecCCCCCc-ccHHHHHHHHHHHHhchHHHHHHHH---HHH
Confidence 99999999954 888 999999987543211110000 000000000 000000000000000 000
Q ss_pred ccCCccchHHHHHHHHHHhhcCCCcccc----hhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhc-Ccee
Q 020741 216 FFSSSMEDHLVLRYQELMKESSRMPLFD----LRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFY-GVLP 290 (322)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~-~~~~ 290 (322)
.............+.............. ............+.++++|+|+|+|++|.++|.+..+.+.+.+ ++++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~ 227 (256)
T PRK10349 148 TMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSES 227 (256)
T ss_pred HccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeE
Confidence 0000000111111111111111100000 1111222334456789999999999999999998888888887 5999
Q ss_pred EEecCCcccceeccchhhhHHHHHHHHhh
Q 020741 291 VCVEGVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 291 ~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
++++++||++++|+| ++|++.+.+|-++
T Consensus 228 ~~i~~~gH~~~~e~p-~~f~~~l~~~~~~ 255 (256)
T PRK10349 228 YIFAKAAHAPFISHP-AEFCHLLVALKQR 255 (256)
T ss_pred EEeCCCCCCccccCH-HHHHHHHHHHhcc
Confidence 999999999999999 9999999998654
No 16
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-31 Score=220.89 Aligned_cols=270 Identities=13% Similarity=0.134 Sum_probs=160.7
Q ss_pred CCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcc-cchhhHh-------hhCCceEEEeCCCCCCCCCCCCC
Q 020741 34 SGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWA-EHWLPFF-------ADSGFDCYAVSLLGQGESDAPPG 105 (322)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~-~~~~~~l-------~~~g~~v~~~D~~G~G~S~~~~~ 105 (322)
+|.+++|...|... .....+.+|+|||+||++++...|. ..+.+.| ..++|+|+++|+||||.|+.+..
T Consensus 48 ~g~~i~y~~~G~~~---~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~ 124 (360)
T PRK06489 48 PELRLHYTTLGTPH---RNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSD 124 (360)
T ss_pred CCceEEEEecCCCC---cccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCc
Confidence 68899999998430 0000011789999999999888875 2444444 13469999999999999986543
Q ss_pred C-----CCCCHHHHHHHHHHHHHHhCC-CCcE-EEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCC
Q 020741 106 T-----VAGSLQTHAGDVADFIQKNLS-LPPV-LLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSG 177 (322)
Q Consensus 106 ~-----~~~~~~~~~~dl~~~l~~~~~-~~~~-lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~ 177 (322)
. ..++++++++++.+++...++ ++++ ++||||||++++.+|.+ +|+ |+++|++++.+...
T Consensus 125 ~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~------------~P~~V~~LVLi~s~~~~~ 192 (360)
T PRK06489 125 GLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEK------------YPDFMDALMPMASQPTEM 192 (360)
T ss_pred CCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHh------------CchhhheeeeeccCcccc
Confidence 1 147899999999887643788 7875 89999999999999965 998 99999998754221
Q ss_pred CCcch-hhhh-----hccc-h-----h-hhHHHHHHhHhhhccccccccccccCCccchHHHHHHHH-HHhhcCCCcccc
Q 020741 178 NSGLV-WRYL-----FTKP-I-----A-AFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQE-LMKESSRMPLFD 243 (322)
Q Consensus 178 ~~~~~-~~~~-----~~~~-~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 243 (322)
..... .... .... . . ......... ..+..........+............+.. ............
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (360)
T PRK06489 193 SGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRAN-PMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADAND 271 (360)
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHH-HHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHH
Confidence 11100 0000 0000 0 0 000000000 00000000000000000000011111111 111110000001
Q ss_pred ----hhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhH--HHHhhhc-CceeEEecCC----cccceeccchhhhHHH
Q 020741 244 ----LRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGL--SETGSFY-GVLPVCVEGV----AHDMMLDCSWEKGASV 312 (322)
Q Consensus 244 ----~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~--~~~~~~~-~~~~~~~~~~----gH~~~~~~~~~~~~~~ 312 (322)
+......+....+.++++|+|+|+|++|.++|++.. +.+.+.+ +.++++++++ ||+++ ++| +++++.
T Consensus 272 ~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P-~~~~~~ 349 (360)
T PRK06489 272 FLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSA-KFWKAY 349 (360)
T ss_pred HHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCH-HHHHHH
Confidence 111112223445678999999999999999998865 6777777 4999999996 99997 788 999999
Q ss_pred HHHHHhhhc
Q 020741 313 ILSWLDGLR 321 (322)
Q Consensus 313 i~~fl~~~~ 321 (322)
|.+||+++.
T Consensus 350 i~~FL~~~~ 358 (360)
T PRK06489 350 LAEFLAQVP 358 (360)
T ss_pred HHHHHHhcc
Confidence 999998875
No 17
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=2.4e-31 Score=211.97 Aligned_cols=247 Identities=14% Similarity=0.142 Sum_probs=160.5
Q ss_pred eEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHH
Q 020741 37 NIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAG 116 (322)
Q Consensus 37 ~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~ 116 (322)
+++|+..++. +..++|+|||+||++++...|. .++..|++ +|+|+++|+||||.|..... +++.++++
T Consensus 2 ~~~~~~~~~~-------~~~~~~~iv~lhG~~~~~~~~~-~~~~~l~~-~~~vi~~D~~G~G~s~~~~~---~~~~~~~~ 69 (255)
T PRK10673 2 KLNIRAQTAQ-------NPHNNSPIVLVHGLFGSLDNLG-VLARDLVN-DHDIIQVDMRNHGLSPRDPV---MNYPAMAQ 69 (255)
T ss_pred cceeeeccCC-------CCCCCCCEEEECCCCCchhHHH-HHHHHHhh-CCeEEEECCCCCCCCCCCCC---CCHHHHHH
Confidence 4566665533 2347899999999999999997 78888876 59999999999999987543 79999999
Q ss_pred HHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcchhhhhhccchhhh
Q 020741 117 DVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVWRYLFTKPIAAF 194 (322)
Q Consensus 117 dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (322)
|+.++++ .++ ++++++||||||.+++.+|.+ +|+ |+++|++++.+.............
T Consensus 70 d~~~~l~-~l~~~~~~lvGhS~Gg~va~~~a~~------------~~~~v~~lvli~~~~~~~~~~~~~~~~~------- 129 (255)
T PRK10673 70 DLLDTLD-ALQIEKATFIGHSMGGKAVMALTAL------------APDRIDKLVAIDIAPVDYHVRRHDEIFA------- 129 (255)
T ss_pred HHHHHHH-HcCCCceEEEEECHHHHHHHHHHHh------------CHhhcceEEEEecCCCCccchhhHHHHH-------
Confidence 9999999 677 889999999999999999955 787 999999986443211110000000
Q ss_pred HHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCC--ccc-chhhhhcCCCCCCCCCccccEEEEeeCCC
Q 020741 195 KVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRM--PLF-DLRKLNASLPVPSVPKSSIKVLVLGAKDD 271 (322)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D 271 (322)
.............. ............+....+.......... ... .+...........++.+++|+|+|+|++|
T Consensus 130 -~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D 206 (255)
T PRK10673 130 -AINAVSEAGATTRQ--QAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNS 206 (255)
T ss_pred -HHHHhhhcccccHH--HHHHHHHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCC
Confidence 00000000000000 0000000000011111111000000000 000 00011111122345678999999999999
Q ss_pred CccChhhHHHHhhhc-CceeEEecCCcccceeccchhhhHHHHHHHHhh
Q 020741 272 FIVDAQGLSETGSFY-GVLPVCVEGVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 272 ~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
..++.+..+.+.+.+ +.++++++++||+++++.| +++.+.|.+||++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p-~~~~~~l~~fl~~ 254 (255)
T PRK10673 207 PYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEKP-DAVLRAIRRYLND 254 (255)
T ss_pred CCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccCH-HHHHHHHHHHHhc
Confidence 999999999888887 5999999999999999999 9999999999975
No 18
>PLN02578 hydrolase
Probab=100.00 E-value=3.3e-31 Score=219.64 Aligned_cols=258 Identities=24% Similarity=0.289 Sum_probs=164.6
Q ss_pred EEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCC
Q 020741 28 VSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTV 107 (322)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~ 107 (322)
.++.. +|.+++|...| ++++|||+||++++...|. .+++.|+++ |+|+++|+||||.|+.+..
T Consensus 69 ~~~~~-~~~~i~Y~~~g------------~g~~vvliHG~~~~~~~w~-~~~~~l~~~-~~v~~~D~~G~G~S~~~~~-- 131 (354)
T PLN02578 69 NFWTW-RGHKIHYVVQG------------EGLPIVLIHGFGASAFHWR-YNIPELAKK-YKVYALDLLGFGWSDKALI-- 131 (354)
T ss_pred eEEEE-CCEEEEEEEcC------------CCCeEEEECCCCCCHHHHH-HHHHHHhcC-CEEEEECCCCCCCCCCccc--
Confidence 34444 68899999877 5578999999999999997 788888764 9999999999999988755
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcchhh--
Q 020741 108 AGSLQTHAGDVADFIQKNLSLPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVWR-- 184 (322)
Q Consensus 108 ~~~~~~~~~dl~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~~-- 184 (322)
.++...+++++.+++++...++++++|||+||.+++.+|.+ +|+ ++++|++++.+..........
T Consensus 132 ~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~------------~p~~v~~lvLv~~~~~~~~~~~~~~~~ 199 (354)
T PLN02578 132 EYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVG------------YPELVAGVALLNSAGQFGSESREKEEA 199 (354)
T ss_pred ccCHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHh------------ChHhcceEEEECCCccccccccccccc
Confidence 68999999999999994334899999999999999999965 888 999999987643322111000
Q ss_pred ------hhhccchhhh-HHHHHHhHhh--h-cccc----ccccccccC-CccchHHHHHHHHHHhhcCCCcccchhhh--
Q 020741 185 ------YLFTKPIAAF-KVTRSLAAKA--F-QTDL----SLCKETFFS-SSMEDHLVLRYQELMKESSRMPLFDLRKL-- 247 (322)
Q Consensus 185 ------~~~~~~~~~~-~~~~~~~~~~--~-~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 247 (322)
.......... .......... . .... ......+.. ...++.....+.... .... ....+...
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~ 277 (354)
T PLN02578 200 IVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPA-ADPN-AGEVYYRLMS 277 (354)
T ss_pred cccccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcc-cCCc-hHHHHHHHHH
Confidence 0000000000 0000000000 0 0000 000000000 001111111110000 0000 00000000
Q ss_pred ------hcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhc-CceeEEecCCcccceeccchhhhHHHHHHHHh
Q 020741 248 ------NASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFY-GVLPVCVEGVAHDMMLDCSWEKGASVILSWLD 318 (322)
Q Consensus 248 ------~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 318 (322)
......+.+.++++|+++|+|++|.+++.+.++.+.+.+ +.+++++ ++||+++.|.| +++++.|.+|++
T Consensus 278 ~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~p-~~~~~~I~~fl~ 353 (354)
T PLN02578 278 RFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEVP-EQVNKALLEWLS 353 (354)
T ss_pred HHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccccCH-HHHHHHHHHHHh
Confidence 011112345689999999999999999999988888877 4888888 58999999999 999999999996
No 19
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=2e-31 Score=215.56 Aligned_cols=247 Identities=16% Similarity=0.153 Sum_probs=155.0
Q ss_pred CceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhccc--chhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHH
Q 020741 35 GLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAE--HWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQ 112 (322)
Q Consensus 35 g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~--~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~ 112 (322)
|.+++|...| ++++|||+||++.+...|.. ..+..|.+.||+|+++|+||||.|+........+ .
T Consensus 19 ~~~~~y~~~g------------~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~-~ 85 (282)
T TIGR03343 19 NFRIHYNEAG------------NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRG-L 85 (282)
T ss_pred ceeEEEEecC------------CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCccccc-c
Confidence 5678888776 55789999999888777742 1245566678999999999999998754311122 2
Q ss_pred HHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCC--cc---h-hh
Q 020741 113 THAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNS--GL---V-WR 184 (322)
Q Consensus 113 ~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~--~~---~-~~ 184 (322)
.+++++.++++ .++ ++++++||||||.+++.++.+ +|+ ++++|++++....... .. . ..
T Consensus 86 ~~~~~l~~~l~-~l~~~~~~lvG~S~Gg~ia~~~a~~------------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 152 (282)
T TIGR03343 86 VNARAVKGLMD-ALDIEKAHLVGNSMGGATALNFALE------------YPDRIGKLILMGPGGLGPSLFAPMPMEGIKL 152 (282)
T ss_pred hhHHHHHHHHH-HcCCCCeeEEEECchHHHHHHHHHh------------ChHhhceEEEECCCCCCccccccCchHHHHH
Confidence 56889999999 788 999999999999999999955 887 9999999875321100 00 0 00
Q ss_pred hhhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccch------hhhhcCCCCCCCCC
Q 020741 185 YLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDL------RKLNASLPVPSVPK 258 (322)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 258 (322)
............ ........ .+.....+.+..+........... ....+ ...........+.+
T Consensus 153 ~~~~~~~~~~~~----~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~ 221 (282)
T TIGR03343 153 LFKLYAEPSYET----LKQMLNVF------LFDQSLITEELLQGRWENIQRQPE-HLKNFLISSQKAPLSTWDVTARLGE 221 (282)
T ss_pred HHHHhcCCCHHH----HHHHHhhC------ccCcccCcHHHHHhHHHHhhcCHH-HHHHHHHhccccccccchHHHHHhh
Confidence 000000000000 00000000 000001111111111000000000 00000 00001111233568
Q ss_pred ccccEEEEeeCCCCccChhhHHHHhhhc-CceeEEecCCcccceeccchhhhHHHHHHHHhh
Q 020741 259 SSIKVLVLGAKDDFIVDAQGLSETGSFY-GVLPVCVEGVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 259 ~~~Pvl~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
+++|+|+++|++|.+++++.++++.+.+ ++++++++++||+++.|+| +++.+.|.+||+.
T Consensus 222 i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p-~~~~~~i~~fl~~ 282 (282)
T TIGR03343 222 IKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWAQWEHA-DAFNRLVIDFLRN 282 (282)
T ss_pred CCCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCCcccCH-HHHHHHHHHHhhC
Confidence 9999999999999999999988888887 5999999999999999999 9999999999963
No 20
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=4e-31 Score=217.95 Aligned_cols=266 Identities=20% Similarity=0.223 Sum_probs=164.2
Q ss_pred eeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchh-hcccchhhHhhhCCceEEEeCCCCCCCCCCCC
Q 020741 26 TRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAW-CWAEHWLPFFADSGFDCYAVSLLGQGESDAPP 104 (322)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~ 104 (322)
+..++...||.+|+|+.+++. ...+.+++|||+||++.+.. .|. .++..|.++||+|+++|+||||.|....
T Consensus 33 ~~~~~~~~dg~~l~~~~~~~~------~~~~~~~~VvllHG~~~~~~~~~~-~~~~~L~~~Gy~V~~~D~rGhG~S~~~~ 105 (330)
T PLN02298 33 SKSFFTSPRGLSLFTRSWLPS------SSSPPRALIFMVHGYGNDISWTFQ-STAIFLAQMGFACFALDLEGHGRSEGLR 105 (330)
T ss_pred ccceEEcCCCCEEEEEEEecC------CCCCCceEEEEEcCCCCCcceehh-HHHHHHHhCCCEEEEecCCCCCCCCCcc
Confidence 456788889999999999865 11134567999999976543 343 5677888889999999999999997543
Q ss_pred CCCCCCHHHHHHHHHHHHHHhC------CCCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCC
Q 020741 105 GTVAGSLQTHAGDVADFIQKNL------SLPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSG 177 (322)
Q Consensus 105 ~~~~~~~~~~~~dl~~~l~~~~------~~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~ 177 (322)
. ...+++.+++|+.++++... +.+++|+||||||.+++.++. .+|+ ++++|++++.....
T Consensus 106 ~-~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~------------~~p~~v~~lvl~~~~~~~~ 172 (330)
T PLN02298 106 A-YVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHL------------ANPEGFDGAVLVAPMCKIS 172 (330)
T ss_pred c-cCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHh------------cCcccceeEEEecccccCC
Confidence 3 23578899999999998321 147999999999999999994 4887 99999998754321
Q ss_pred CCcchhhhhhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCC---cccchhhhhc--CCC
Q 020741 178 NSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRM---PLFDLRKLNA--SLP 252 (322)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~ 252 (322)
..... .. .... ................................+.. ....... .......+.. ...
T Consensus 173 ~~~~~-~~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (330)
T PLN02298 173 DKIRP-PW------PIPQ-ILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAK-RNPMRYNGKPRLGTVVELLRVTDYL 243 (330)
T ss_pred cccCC-ch------HHHH-HHHHHHHHCCCCccccCCCcccccccCHHHHHHHH-hCccccCCCccHHHHHHHHHHHHHH
Confidence 11000 00 0000 00000010000000000000000000000000000 0000000 0000000000 001
Q ss_pred CCCCCCccccEEEEeeCCCCccChhhHHHHhhhc---CceeEEecCCcccceeccc---hhhhHHHHHHHHhhh
Q 020741 253 VPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFY---GVLPVCVEGVAHDMMLDCS---WEKGASVILSWLDGL 320 (322)
Q Consensus 253 ~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~~~~---~~~~~~~i~~fl~~~ 320 (322)
...+.++++|+|+++|++|.+++++.++.+.+.+ ++++++++++||.++.+.| .+++.+.|.+||++.
T Consensus 244 ~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 244 GKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNER 317 (330)
T ss_pred HHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHh
Confidence 2345688999999999999999999999887765 4899999999999998776 245788899999875
No 21
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.98 E-value=9.6e-31 Score=207.93 Aligned_cols=246 Identities=18% Similarity=0.223 Sum_probs=161.7
Q ss_pred eEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHH
Q 020741 37 NIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAG 116 (322)
Q Consensus 37 ~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~ 116 (322)
+++|..+|+. +++|+|||+||++.+...|. .+++.|. .||+|+++|+||||.|..... .++++++++
T Consensus 1 ~~~~~~~g~~---------~~~~~li~~hg~~~~~~~~~-~~~~~l~-~~~~v~~~d~~G~G~s~~~~~--~~~~~~~~~ 67 (251)
T TIGR02427 1 RLHYRLDGAA---------DGAPVLVFINSLGTDLRMWD-PVLPALT-PDFRVLRYDKRGHGLSDAPEG--PYSIEDLAD 67 (251)
T ss_pred CceEEeecCC---------CCCCeEEEEcCcccchhhHH-HHHHHhh-cccEEEEecCCCCCCCCCCCC--CCCHHHHHH
Confidence 3667777744 36789999999999999997 7888886 479999999999999976554 579999999
Q ss_pred HHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcchhhhhhcc-chhh
Q 020741 117 DVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVWRYLFTK-PIAA 193 (322)
Q Consensus 117 dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~~~~~~~-~~~~ 193 (322)
++.++++ .++ ++++++|||+||.+++.+|.+ +|+ +.+++++++................. ....
T Consensus 68 ~~~~~i~-~~~~~~v~liG~S~Gg~~a~~~a~~------------~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (251)
T TIGR02427 68 DVLALLD-HLGIERAVFCGLSLGGLIAQGLAAR------------RPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGL 134 (251)
T ss_pred HHHHHHH-HhCCCceEEEEeCchHHHHHHHHHH------------CHHHhHHHhhccCccccCchhhHHHHHhhhhhccH
Confidence 9999999 677 899999999999999999955 777 99999988654322211111100000 0000
Q ss_pred hHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccc-hhhhhcCCCCCCCCCccccEEEEeeCCCC
Q 020741 194 FKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFD-LRKLNASLPVPSVPKSSIKVLVLGAKDDF 272 (322)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~ 272 (322)
...........+. ..+.. ........+...+.......... ...+........+.++++|+++++|++|.
T Consensus 135 ~~~~~~~~~~~~~-------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~ 205 (251)
T TIGR02427 135 AALADAVLERWFT-------PGFRE--AHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDG 205 (251)
T ss_pred HHHHHHHHHHHcc-------ccccc--CChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCC
Confidence 0000000000000 00000 01111122222221111100000 01111112223456789999999999999
Q ss_pred ccChhhHHHHhhhc-CceeEEecCCcccceeccchhhhHHHHHHHHh
Q 020741 273 IVDAQGLSETGSFY-GVLPVCVEGVAHDMMLDCSWEKGASVILSWLD 318 (322)
Q Consensus 273 ~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 318 (322)
+++.+..+.+.+.+ +.++++++++||+.+.+.| +++.+.|.+|++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p-~~~~~~i~~fl~ 251 (251)
T TIGR02427 206 STPPELVREIADLVPGARFAEIRGAGHIPCVEQP-EAFNAALRDFLR 251 (251)
T ss_pred cCChHHHHHHHHhCCCceEEEECCCCCcccccCh-HHHHHHHHHHhC
Confidence 99999888888877 4899999999999999998 999999999984
No 22
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.97 E-value=2.5e-31 Score=210.17 Aligned_cols=234 Identities=15% Similarity=0.153 Sum_probs=143.7
Q ss_pred CCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEec
Q 020741 58 RPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LPPVLLGHS 136 (322)
Q Consensus 58 ~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S 136 (322)
+|+|||+||++++...|. .+++.| + +|+|+++|+||||.|..+.. .+++++++|+.++++ .++ ++++++|||
T Consensus 2 ~p~vvllHG~~~~~~~w~-~~~~~l-~-~~~vi~~D~~G~G~S~~~~~---~~~~~~~~~l~~~l~-~~~~~~~~lvG~S 74 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQ-PVGEAL-P-DYPRLYIDLPGHGGSAAISV---DGFADVSRLLSQTLQ-SYNILPYWLVGYS 74 (242)
T ss_pred CCEEEEECCCCCChHHHH-HHHHHc-C-CCCEEEecCCCCCCCCCccc---cCHHHHHHHHHHHHH-HcCCCCeEEEEEC
Confidence 468999999999999997 788888 3 59999999999999987654 589999999999999 677 999999999
Q ss_pred hhHHHHHHHHHHHhhhhhccccCCC-CC-cceEEEeccCCCCCCCcchhhhhhccchhhhHHHHHHhHhhhccccccccc
Q 020741 137 FGGLIIQYYIARIRNEKMLEMETPY-PE-IAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKE 214 (322)
Q Consensus 137 ~Gg~~a~~~a~~~~~~~~~~~~~~~-p~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (322)
|||.+++.+|.+ + ++ +++++++++.+..............................+... ...
T Consensus 75 ~Gg~va~~~a~~------------~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 139 (242)
T PRK11126 75 LGGRIAMYYACQ------------GLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADW---YQQ 139 (242)
T ss_pred HHHHHHHHHHHh------------CCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHH---Hhc
Confidence 999999999965 5 44 999998876542211110000000000000000000000000000 000
Q ss_pred cccCCccchHHHHHHHHHHhhcCCCcccch-hh---hhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcCcee
Q 020741 215 TFFSSSMEDHLVLRYQELMKESSRMPLFDL-RK---LNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYGVLP 290 (322)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~ 290 (322)
..+. .........+..............+ .. .........+.++++|+++|+|++|..+. .+.+..+.++
T Consensus 140 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~~~~~ 213 (242)
T PRK11126 140 PVFA-SLNAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQLALPL 213 (242)
T ss_pred chhh-ccCccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHHhcCeE
Confidence 0000 0111111111111000000000000 00 00111223456899999999999998653 2233347899
Q ss_pred EEecCCcccceeccchhhhHHHHHHHHhhh
Q 020741 291 VCVEGVAHDMMLDCSWEKGASVILSWLDGL 320 (322)
Q Consensus 291 ~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 320 (322)
++++++||+++.|+| +++++.|.+||+++
T Consensus 214 ~~i~~~gH~~~~e~p-~~~~~~i~~fl~~~ 242 (242)
T PRK11126 214 HVIPNAGHNAHRENP-AAFAASLAQILRLI 242 (242)
T ss_pred EEeCCCCCchhhhCh-HHHHHHHHHHHhhC
Confidence 999999999999999 99999999999763
No 23
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.97 E-value=5.4e-30 Score=204.83 Aligned_cols=269 Identities=24% Similarity=0.276 Sum_probs=178.9
Q ss_pred CCceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCC-
Q 020741 23 QGQTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESD- 101 (322)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~- 101 (322)
....+.++...||..++|..|.+. .+...+||++||++.+...|. .++..|..+||.|+++|+||||.|.
T Consensus 7 ~~~~~~~~~~~d~~~~~~~~~~~~--------~~~~g~Vvl~HG~~Eh~~ry~-~la~~l~~~G~~V~~~D~RGhG~S~r 77 (298)
T COG2267 7 RTRTEGYFTGADGTRLRYRTWAAP--------EPPKGVVVLVHGLGEHSGRYE-ELADDLAARGFDVYALDLRGHGRSPR 77 (298)
T ss_pred cccccceeecCCCceEEEEeecCC--------CCCCcEEEEecCchHHHHHHH-HHHHHHHhCCCEEEEecCCCCCCCCC
Confidence 344566777779999999999976 122279999999999999997 7999999999999999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhC---C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCC
Q 020741 102 APPGTVAGSLQTHAGDVADFIQKNL---S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPS 176 (322)
Q Consensus 102 ~~~~~~~~~~~~~~~dl~~~l~~~~---~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~ 176 (322)
.... ...++.++.+|+.++++... . .+++++||||||.|++.++.+ ++. +.++|+.+|....
T Consensus 78 ~~rg-~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~------------~~~~i~~~vLssP~~~l 144 (298)
T COG2267 78 GQRG-HVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLAR------------YPPRIDGLVLSSPALGL 144 (298)
T ss_pred CCcC-CchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHh------------CCccccEEEEECccccC
Confidence 3333 34569999999999998553 2 889999999999999999966 555 9999999986543
Q ss_pred CCCcchhhhhhccchhhhHHHHHHhHhhhccccccc----cccccCCccchHHHHHHHHHHh-hcCCCcccchhh-hh--
Q 020741 177 GNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLC----KETFFSSSMEDHLVLRYQELMK-ESSRMPLFDLRK-LN-- 248 (322)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~-- 248 (322)
.. ..... ..................... ........-++...+.|...-. .........+.. ..
T Consensus 145 ~~--~~~~~------~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~ 216 (298)
T COG2267 145 GG--AILRL------ILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAG 216 (298)
T ss_pred Ch--hHHHH------HHHHHhcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhh
Confidence 32 00000 000000000000000000000 0000011112333333332221 111111111111 11
Q ss_pred cCCCCCCCCCccccEEEEeeCCCCccC-hhhHHHHhhhcC---ceeEEecCCcccceeccch--hhhHHHHHHHHhhhc
Q 020741 249 ASLPVPSVPKSSIKVLVLGAKDDFIVD-AQGLSETGSFYG---VLPVCVEGVAHDMMLDCSW--EKGASVILSWLDGLR 321 (322)
Q Consensus 249 ~~~~~~~~~~~~~Pvl~i~g~~D~~~~-~~~~~~~~~~~~---~~~~~~~~~gH~~~~~~~~--~~~~~~i~~fl~~~~ 321 (322)
..........+++|+|+++|++|.+++ .+...++.+..+ +++++++|+.|.++.|.++ +++.+.+.+|+.+..
T Consensus 217 ~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 217 RVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEAL 295 (298)
T ss_pred cccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhc
Confidence 112333456889999999999999999 688887777664 7899999999999999986 899999999998753
No 24
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.97 E-value=1.1e-30 Score=208.38 Aligned_cols=250 Identities=18% Similarity=0.199 Sum_probs=159.3
Q ss_pred EEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 020741 38 IEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGD 117 (322)
Q Consensus 38 l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~d 117 (322)
++|..+|++ ..++|+|||+||++++...|. .+++.|.+ +|+|+++|+||||.|..... ..+++++++++
T Consensus 1 ~~~~~~~~~--------~~~~~~iv~lhG~~~~~~~~~-~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~ 69 (257)
T TIGR03611 1 MHYELHGPP--------DADAPVVVLSSGLGGSGSYWA-PQLDVLTQ-RFHVVTYDHRGTGRSPGELP-PGYSIAHMADD 69 (257)
T ss_pred CEEEEecCC--------CCCCCEEEEEcCCCcchhHHH-HHHHHHHh-ccEEEEEcCCCCCCCCCCCc-ccCCHHHHHHH
Confidence 467777753 135789999999999999997 67888865 69999999999999986543 35899999999
Q ss_pred HHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcchhhhhhccchhhhH
Q 020741 118 VADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFK 195 (322)
Q Consensus 118 l~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (322)
+.++++ .++ ++++++|||+||.+++.++++ +|+ ++++|++++......... ..... . ..
T Consensus 70 ~~~~i~-~~~~~~~~l~G~S~Gg~~a~~~a~~------------~~~~v~~~i~~~~~~~~~~~~~--~~~~~-~---~~ 130 (257)
T TIGR03611 70 VLQLLD-ALNIERFHFVGHALGGLIGLQLALR------------YPERLLSLVLINAWSRPDPHTR--RCFDV-R---IA 130 (257)
T ss_pred HHHHHH-HhCCCcEEEEEechhHHHHHHHHHH------------ChHHhHHheeecCCCCCChhHH--HHHHH-H---HH
Confidence 999999 677 899999999999999999965 777 999999987543211100 00000 0 00
Q ss_pred HHHHHhHhhhcc--ccccccccccCCccchHHHHHHHHHHhhcCC-Cc-ccchhhhhcCCCCCCCCCccccEEEEeeCCC
Q 020741 196 VTRSLAAKAFQT--DLSLCKETFFSSSMEDHLVLRYQELMKESSR-MP-LFDLRKLNASLPVPSVPKSSIKVLVLGAKDD 271 (322)
Q Consensus 196 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D 271 (322)
.........+.. ........+.... ................. .. ......+........+.++++|+++++|++|
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 209 (257)
T TIGR03611 131 LLQHAGPEAYVHAQALFLYPADWISEN-AARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDD 209 (257)
T ss_pred HHhccCcchhhhhhhhhhccccHhhcc-chhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcC
Confidence 000000000000 0000000000000 00000000000000000 00 0001111112223445688999999999999
Q ss_pred CccChhhHHHHhhhc-CceeEEecCCcccceeccchhhhHHHHHHHHhh
Q 020741 272 FIVDAQGLSETGSFY-GVLPVCVEGVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 272 ~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
.+++.+.++.+.+.+ +.+++.++++||++++++| +++.+.|.+||+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-~~~~~~i~~fl~~ 257 (257)
T TIGR03611 210 MLVPYTQSLRLAAALPNAQLKLLPYGGHASNVTDP-ETFNRALLDFLKT 257 (257)
T ss_pred cccCHHHHHHHHHhcCCceEEEECCCCCCccccCH-HHHHHHHHHHhcC
Confidence 999999988888877 4899999999999999998 9999999999963
No 25
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.97 E-value=9e-30 Score=203.09 Aligned_cols=251 Identities=15% Similarity=0.197 Sum_probs=160.1
Q ss_pred CCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHH
Q 020741 33 PSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQ 112 (322)
Q Consensus 33 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~ 112 (322)
.+|.+++|.. |. +++|+|||+||++++...|. .+...|.++||+|+++|+||||.|..... ..++++
T Consensus 4 ~~~~~~~~~~--~~---------~~~p~vvliHG~~~~~~~w~-~~~~~L~~~g~~vi~~dl~g~G~s~~~~~-~~~~~~ 70 (273)
T PLN02211 4 ENGEEVTDMK--PN---------RQPPHFVLIHGISGGSWCWY-KIRCLMENSGYKVTCIDLKSAGIDQSDAD-SVTTFD 70 (273)
T ss_pred cccccccccc--cc---------CCCCeEEEECCCCCCcCcHH-HHHHHHHhCCCEEEEecccCCCCCCCCcc-cCCCHH
Confidence 3677777776 32 37789999999999999997 88999988899999999999998854433 237999
Q ss_pred HHHHHHHHHHHHhC-C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcchhhhhhcc
Q 020741 113 THAGDVADFIQKNL-S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVWRYLFTK 189 (322)
Q Consensus 113 ~~~~dl~~~l~~~~-~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~~~~~~~ 189 (322)
++++++.++++ .+ . ++++|+||||||.+++.++.+ +|+ |+++|++++.................
T Consensus 71 ~~~~~l~~~i~-~l~~~~~v~lvGhS~GG~v~~~~a~~------------~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~ 137 (273)
T PLN02211 71 EYNKPLIDFLS-SLPENEKVILVGHSAGGLSVTQAIHR------------FPKKICLAVYVAATMLKLGFQTDEDMKDGV 137 (273)
T ss_pred HHHHHHHHHHH-hcCCCCCEEEEEECchHHHHHHHHHh------------ChhheeEEEEeccccCCCCCCHHHHHhccc
Confidence 99999999999 55 3 899999999999999999954 787 99999998754321111110000000
Q ss_pred chhhhHHHHHHhHhhhcc------ccc----cccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCc
Q 020741 190 PIAAFKVTRSLAAKAFQT------DLS----LCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKS 259 (322)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (322)
+ ............... ... .....++....+.+............+.. .+..........++
T Consensus 138 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 209 (273)
T PLN02211 138 P--DLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPIL------ALRSARFEEETGDI 209 (273)
T ss_pred c--chhhhccceeeeeccCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCcc------cccccccccccccc
Confidence 0 000000000000000 000 00000111111222111111111111110 11111111112344
Q ss_pred -cccEEEEeeCCCCccChhhHHHHhhhcC-ceeEEecCCcccceeccchhhhHHHHHHHHhh
Q 020741 260 -SIKVLVLGAKDDFIVDAQGLSETGSFYG-VLPVCVEGVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 260 -~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
++|+++|.|++|..+|++.++.+.+.++ .+++.++ +||.++++.| +++.+.|.++...
T Consensus 210 ~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l~-~gH~p~ls~P-~~~~~~i~~~a~~ 269 (273)
T PLN02211 210 DKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELE-SDHSPFFSTP-FLLFGLLIKAAAS 269 (273)
T ss_pred CccceEEEEeCCCCCCCHHHHHHHHHhCCccEEEEEC-CCCCccccCH-HHHHHHHHHHHHH
Confidence 7899999999999999999999998874 7899997 7999999999 9999999988754
No 26
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=1.3e-29 Score=209.59 Aligned_cols=263 Identities=17% Similarity=0.212 Sum_probs=159.3
Q ss_pred ceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchh------------hcccchhh---HhhhCCceE
Q 020741 25 QTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAW------------CWAEHWLP---FFADSGFDC 89 (322)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~------------~~~~~~~~---~l~~~g~~v 89 (322)
+.-.+... +|.+++|...|+. ++++||+||++++.. .|. .+++ .|...+|+|
T Consensus 36 ~~~~~~~~-~~~~l~y~~~G~~-----------~~p~vll~g~~~~~~~~~~~~~~~~~~~w~-~~v~~~~~L~~~~~~V 102 (343)
T PRK08775 36 LSMRHAGL-EDLRLRYELIGPA-----------GAPVVFVAGGISAHRHVAATATFPEKGWWE-GLVGSGRALDPARFRL 102 (343)
T ss_pred eeecCCCC-CCceEEEEEeccC-----------CCCEEEEecCCCcccccccccCCCCCCcch-hccCCCCccCccccEE
Confidence 33344455 7899999999832 345777777665554 464 6665 564346999
Q ss_pred EEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCc-EEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cce
Q 020741 90 YAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LPP-VLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAG 166 (322)
Q Consensus 90 ~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~-~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~ 166 (322)
+++|+||||.|.. . .++..++++|+.++++ .++ +++ +|+||||||++++.+|.+ +|+ |.+
T Consensus 103 i~~Dl~G~g~s~~--~--~~~~~~~a~dl~~ll~-~l~l~~~~~lvG~SmGG~vA~~~A~~------------~P~~V~~ 165 (343)
T PRK08775 103 LAFDFIGADGSLD--V--PIDTADQADAIALLLD-ALGIARLHAFVGYSYGALVGLQFASR------------HPARVRT 165 (343)
T ss_pred EEEeCCCCCCCCC--C--CCCHHHHHHHHHHHHH-HcCCCcceEEEEECHHHHHHHHHHHH------------ChHhhhe
Confidence 9999999998842 2 3688999999999999 788 665 799999999999999965 888 999
Q ss_pred EEEeccCCCCCCCcchhhhhhcc----c------hhhhHHHHHHhHhhhccccccccccccC------CccchHHHHHHH
Q 020741 167 AVLVCSVPPSGNSGLVWRYLFTK----P------IAAFKVTRSLAAKAFQTDLSLCKETFFS------SSMEDHLVLRYQ 230 (322)
Q Consensus 167 ~vl~~~~~~~~~~~~~~~~~~~~----~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 230 (322)
+|++++.+............... . ................. .......+.. .... .....+.
T Consensus 166 LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~l 243 (343)
T PRK08775 166 LVVVSGAHRAHPYAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRT-PEEFEERFDAPPEVINGRVR-VAAEDYL 243 (343)
T ss_pred EEEECccccCCHHHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCC-HHHHHHHhCCCccccCCCcc-chHHHHH
Confidence 99999864322111000000000 0 00000000000000000 0000000000 0000 0111111
Q ss_pred -----HHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhc--CceeEEecC-Cccccee
Q 020741 231 -----ELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFY--GVLPVCVEG-VAHDMML 302 (322)
Q Consensus 231 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~-~gH~~~~ 302 (322)
................... .....+.++++|+|+|+|++|.++|++..+.+.+.+ +.+++++++ +||++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~l 322 (343)
T PRK08775 244 DAAGAQYVARTPVNAYLRLSESID-LHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFL 322 (343)
T ss_pred HHHHHHHHHhcChhHHHHHHHHHh-hcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHh
Confidence 1111111111111110000 112235789999999999999999998888888766 489999985 9999999
Q ss_pred ccchhhhHHHHHHHHhhhc
Q 020741 303 DCSWEKGASVILSWLDGLR 321 (322)
Q Consensus 303 ~~~~~~~~~~i~~fl~~~~ 321 (322)
|+| ++|++.|.+||+++.
T Consensus 323 E~P-e~~~~~l~~FL~~~~ 340 (343)
T PRK08775 323 KET-DRIDAILTTALRSTG 340 (343)
T ss_pred cCH-HHHHHHHHHHHHhcc
Confidence 999 999999999998753
No 27
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=3.7e-29 Score=193.86 Aligned_cols=273 Identities=20% Similarity=0.254 Sum_probs=173.9
Q ss_pred CCCceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCC
Q 020741 22 KQGQTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESD 101 (322)
Q Consensus 22 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~ 101 (322)
.-++...++.++++..+......+. .++++++|++||+|++...|. .-.+.|++ .++|+++|++|+|.|+
T Consensus 62 ~v~~~~~~v~i~~~~~iw~~~~~~~--------~~~~~plVliHGyGAg~g~f~-~Nf~~La~-~~~vyaiDllG~G~SS 131 (365)
T KOG4409|consen 62 PVPYSKKYVRIPNGIEIWTITVSNE--------SANKTPLVLIHGYGAGLGLFF-RNFDDLAK-IRNVYAIDLLGFGRSS 131 (365)
T ss_pred CCCcceeeeecCCCceeEEEeeccc--------ccCCCcEEEEeccchhHHHHH-Hhhhhhhh-cCceEEecccCCCCCC
Confidence 3456778888888877777666644 268899999999999999887 44677877 5999999999999999
Q ss_pred CCCCCCC--CCHHHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCC
Q 020741 102 APPGTVA--GSLQTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSG 177 (322)
Q Consensus 102 ~~~~~~~--~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~ 177 (322)
.+.-... .....+++-+.++-. ..+ .+.+|+|||+||.++..|| ..||+ |+.+||++|.....
T Consensus 132 RP~F~~d~~~~e~~fvesiE~WR~-~~~L~KmilvGHSfGGYLaa~YA------------lKyPerV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 132 RPKFSIDPTTAEKEFVESIEQWRK-KMGLEKMILVGHSFGGYLAAKYA------------LKYPERVEKLILVSPWGFPE 198 (365)
T ss_pred CCCCCCCcccchHHHHHHHHHHHH-HcCCcceeEeeccchHHHHHHHH------------HhChHhhceEEEeccccccc
Confidence 8875221 234467777777777 677 9999999999999999999 45999 99999999976544
Q ss_pred CCc---------chhh------hhhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCccc
Q 020741 178 NSG---------LVWR------YLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLF 242 (322)
Q Consensus 178 ~~~---------~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (322)
... ..+. .....+....+.......+........... -+.....++.+..|.............
T Consensus 199 ~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~-k~~~~~~ed~l~~YiY~~n~~~psgE~ 277 (365)
T KOG4409|consen 199 KPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFR-KFPSLIEEDFLHEYIYHCNAQNPSGET 277 (365)
T ss_pred CCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHH-hccccchhHHHHHHHHHhcCCCCcHHH
Confidence 220 0000 001112222222222222222211111100 111122333344444443333332222
Q ss_pred chhhhhcCCCC------CCCC--CccccEEEEeeCCCCccChhhHHHHhhh-c--CceeEEecCCcccceeccchhhhHH
Q 020741 243 DLRKLNASLPV------PSVP--KSSIKVLVLGAKDDFIVDAQGLSETGSF-Y--GVLPVCVEGVAHDMMLDCSWEKGAS 311 (322)
Q Consensus 243 ~~~~~~~~~~~------~~~~--~~~~Pvl~i~g~~D~~~~~~~~~~~~~~-~--~~~~~~~~~~gH~~~~~~~~~~~~~ 311 (322)
.+..+...... ..+. +-+||+++|+|++|-+-. ....++.+. . .++.++++++||.+.+++| +.|++
T Consensus 278 ~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD~-~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp-~~Fn~ 355 (365)
T KOG4409|consen 278 AFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWMDK-NAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNP-EFFNQ 355 (365)
T ss_pred HHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcccccc-hhHHHHHHHhhcccceEEEecCCCceeecCCH-HHHHH
Confidence 22222222111 1122 335999999999997643 333444443 2 3999999999999999999 99999
Q ss_pred HHHHHHhhh
Q 020741 312 VILSWLDGL 320 (322)
Q Consensus 312 ~i~~fl~~~ 320 (322)
.|.+++++.
T Consensus 356 ~v~~~~~~~ 364 (365)
T KOG4409|consen 356 IVLEECDKV 364 (365)
T ss_pred HHHHHHhcc
Confidence 999998763
No 28
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.97 E-value=4.1e-29 Score=189.97 Aligned_cols=269 Identities=20% Similarity=0.223 Sum_probs=178.6
Q ss_pred CceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcch-hhcccchhhHhhhCCceEEEeCCCCCCCCCC
Q 020741 24 GQTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAA-WCWAEHWLPFFADSGFDCYAVSLLGQGESDA 102 (322)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~ 102 (322)
.....+++.++|.++.+..|.|. .+.+.+..|+++||++... ..|. .++..|+..||.|+++|++|||.|++
T Consensus 26 ~~~~~~~~n~rG~~lft~~W~p~------~~~~pr~lv~~~HG~g~~~s~~~~-~~a~~l~~~g~~v~a~D~~GhG~SdG 98 (313)
T KOG1455|consen 26 TYSESFFTNPRGAKLFTQSWLPL------SGTEPRGLVFLCHGYGEHSSWRYQ-STAKRLAKSGFAVYAIDYEGHGRSDG 98 (313)
T ss_pred ceeeeeEEcCCCCEeEEEecccC------CCCCCceEEEEEcCCcccchhhHH-HHHHHHHhCCCeEEEeeccCCCcCCC
Confidence 35667889999999999999975 2225677899999998765 5554 78999999999999999999999998
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhC------CCCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCC
Q 020741 103 PPGTVAGSLQTHAGDVADFIQKNL------SLPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPP 175 (322)
Q Consensus 103 ~~~~~~~~~~~~~~dl~~~l~~~~------~~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~ 175 (322)
... ..-+++..++|+..+++... +.+.+|+||||||.+++.++.+ +|+ ..++|+++|...
T Consensus 99 l~~-yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k------------~p~~w~G~ilvaPmc~ 165 (313)
T KOG1455|consen 99 LHA-YVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALK------------DPNFWDGAILVAPMCK 165 (313)
T ss_pred Ccc-cCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhh------------CCcccccceeeecccc
Confidence 776 45689999999999888432 2678999999999999999944 888 899999988643
Q ss_pred CCCCcchhhhhhccchhhhHHHHHHhHhhhccccccccccccCCcc-chHHHHHHHHH-HhhcCCCcccchhhhh--cCC
Q 020741 176 SGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSM-EDHLVLRYQEL-MKESSRMPLFDLRKLN--ASL 251 (322)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~ 251 (322)
...... +..........+......+............+ +++..+..... +.............+. ...
T Consensus 166 i~~~~k--------p~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~ 237 (313)
T KOG1455|consen 166 ISEDTK--------PHPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTAD 237 (313)
T ss_pred cCCccC--------CCcHHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHH
Confidence 222110 11111111112222222222110010000001 11111111111 0000000111111111 112
Q ss_pred CCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcC---ceeEEecCCccccee-cc--chhhhHHHHHHHHhhh
Q 020741 252 PVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG---VLPVCVEGVAHDMML-DC--SWEKGASVILSWLDGL 320 (322)
Q Consensus 252 ~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~gH~~~~-~~--~~~~~~~~i~~fl~~~ 320 (322)
....+.++++|.+++||+.|.++.++.++++++... +++.++||.-|.++. |. ..+.+...|.+||++.
T Consensus 238 le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 238 LEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 234567899999999999999999999999999873 999999999999885 22 2578889999999874
No 29
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=5.1e-29 Score=206.84 Aligned_cols=264 Identities=16% Similarity=0.212 Sum_probs=166.8
Q ss_pred eeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCC
Q 020741 26 TRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPG 105 (322)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~ 105 (322)
....+..++|..+++..|.|. ..+.+++|||+||++++...|. .+++.|.++||+|+++|+||||.|+....
T Consensus 111 ~~~~~~~~~~~~l~~~~~~p~-------~~~~~~~Vl~lHG~~~~~~~~~-~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~ 182 (395)
T PLN02652 111 ATSLFYGARRNALFCRSWAPA-------AGEMRGILIIIHGLNEHSGRYL-HFAKQLTSCGFGVYAMDWIGHGGSDGLHG 182 (395)
T ss_pred EEEEEECCCCCEEEEEEecCC-------CCCCceEEEEECCchHHHHHHH-HHHHHHHHCCCEEEEeCCCCCCCCCCCCC
Confidence 445667778899999999874 1235678999999999888886 89999999999999999999999987643
Q ss_pred CCCCCHHHHHHHHHHHHHHhC---C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCC-CcceEEEeccCCCCCCCc
Q 020741 106 TVAGSLQTHAGDVADFIQKNL---S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYP-EIAGAVLVCSVPPSGNSG 180 (322)
Q Consensus 106 ~~~~~~~~~~~dl~~~l~~~~---~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p-~v~~~vl~~~~~~~~~~~ 180 (322)
...+++.+++|+.++++... + .+++++||||||.+++.++.. ...+ .+.++|+.+|........
T Consensus 183 -~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~~----------p~~~~~v~glVL~sP~l~~~~~~ 251 (395)
T PLN02652 183 -YVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAASY----------PSIEDKLEGIVLTSPALRVKPAH 251 (395)
T ss_pred -CCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHhc----------cCcccccceEEEECcccccccch
Confidence 23578888999988888332 2 479999999999999987732 1122 389999987753221110
Q ss_pred chhhhhhccchhhhHHHHHHhHhhhccccccccc-cccCCccchHHH-HHHHHHHhhcCCCccc---chhhhhcCCCCCC
Q 020741 181 LVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKE-TFFSSSMEDHLV-LRYQELMKESSRMPLF---DLRKLNASLPVPS 255 (322)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 255 (322)
.... ................... .......+++.. ..+...+......... ...... ......
T Consensus 252 ~~~~-----------~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~-~~l~~~ 319 (395)
T PLN02652 252 PIVG-----------AVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRIS-SYLTRN 319 (395)
T ss_pred HHHH-----------HHHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHH-HHHHhh
Confidence 0000 0000111111100000000 000000011111 1110000000000000 000010 012344
Q ss_pred CCCccccEEEEeeCCCCccChhhHHHHhhhcC---ceeEEecCCcccceeccchhhhHHHHHHHHhhh
Q 020741 256 VPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG---VLPVCVEGVAHDMMLDCSWEKGASVILSWLDGL 320 (322)
Q Consensus 256 ~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 320 (322)
+.++++|+|+++|++|.+++++.++.+++... ++++++++++|.++.+..++++.+.+.+||+++
T Consensus 320 L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~ 387 (395)
T PLN02652 320 FKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKR 387 (395)
T ss_pred cccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999887752 789999999999988744499999999999864
No 30
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.97 E-value=9.2e-29 Score=200.67 Aligned_cols=265 Identities=14% Similarity=0.155 Sum_probs=158.6
Q ss_pred EEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCC-
Q 020741 29 SHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTV- 107 (322)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~- 107 (322)
.++. +|.++.|...+.. ..+++|||+||++++...|...+...+.+.||+|+++|+||||.|..+....
T Consensus 6 ~~~~-~~~~~~~~~~~~~---------~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~ 75 (288)
T TIGR01250 6 IITV-DGGYHLFTKTGGE---------GEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDE 75 (288)
T ss_pred eecC-CCCeEEEEeccCC---------CCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccc
Confidence 4555 6678888887754 3468999999986665555446666666668999999999999998754321
Q ss_pred CCCHHHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcch-hh
Q 020741 108 AGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLV-WR 184 (322)
Q Consensus 108 ~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~-~~ 184 (322)
.++++++++++.++++ .++ ++++++|||+||.+++.++.. +|+ +.+++++++.......... ..
T Consensus 76 ~~~~~~~~~~~~~~~~-~~~~~~~~liG~S~Gg~ia~~~a~~------------~p~~v~~lvl~~~~~~~~~~~~~~~~ 142 (288)
T TIGR01250 76 LWTIDYFVDELEEVRE-KLGLDKFYLLGHSWGGMLAQEYALK------------YGQHLKGLIISSMLDSAPEYVKELNR 142 (288)
T ss_pred cccHHHHHHHHHHHHH-HcCCCcEEEEEeehHHHHHHHHHHh------------CccccceeeEecccccchHHHHHHHH
Confidence 3789999999999999 777 889999999999999999955 787 9999998875422111000 00
Q ss_pred hhhccchhhhHHHHHHhHhh-hccc--cccccc----cccCCccchHHHHHHHHHHhhc------CCCcccchhhhhcCC
Q 020741 185 YLFTKPIAAFKVTRSLAAKA-FQTD--LSLCKE----TFFSSSMEDHLVLRYQELMKES------SRMPLFDLRKLNASL 251 (322)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 251 (322)
.................... +... ...... ...................... ..........+....
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (288)
T TIGR01250 143 LRKELPPEVRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWD 222 (288)
T ss_pred HHhhcChhHHHHHHHHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccC
Confidence 00000000000000000000 0000 000000 0000000000000000000000 000000000011112
Q ss_pred CCCCCCCccccEEEEeeCCCCccChhhHHHHhhhc-CceeEEecCCcccceeccchhhhHHHHHHHHh
Q 020741 252 PVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFY-GVLPVCVEGVAHDMMLDCSWEKGASVILSWLD 318 (322)
Q Consensus 252 ~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 318 (322)
....+.++++|+++++|++|.+ +++..+.+.+.+ +.++++++++||+++.++| +++.+.|.+||+
T Consensus 223 ~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p-~~~~~~i~~fl~ 288 (288)
T TIGR01250 223 ITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIEDP-EVYFKLLSDFIR 288 (288)
T ss_pred HHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCCH-HHHHHHHHHHhC
Confidence 2234568899999999999985 567777777766 4889999999999999998 999999999985
No 31
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.97 E-value=1.2e-29 Score=200.83 Aligned_cols=236 Identities=18% Similarity=0.109 Sum_probs=147.0
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEec
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLPPVLLGHS 136 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~lvG~S 136 (322)
+.|+|||+||++++...|. .+++.|.+ +|+|+++|+||||.|.... .++++++++++.+.+ .++++++|||
T Consensus 3 g~~~iv~~HG~~~~~~~~~-~~~~~l~~-~~~vi~~d~~G~G~s~~~~---~~~~~~~~~~~~~~~----~~~~~lvG~S 73 (245)
T TIGR01738 3 GNVHLVLIHGWGMNAEVFR-CLDEELSA-HFTLHLVDLPGHGRSRGFG---PLSLADAAEAIAAQA----PDPAIWLGWS 73 (245)
T ss_pred CCceEEEEcCCCCchhhHH-HHHHhhcc-CeEEEEecCCcCccCCCCC---CcCHHHHHHHHHHhC----CCCeEEEEEc
Confidence 3478999999999999997 78899975 5999999999999987654 367777777766543 3799999999
Q ss_pred hhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcchhhhhhccchhhh-HHHHHHhHhhhccccccccc
Q 020741 137 FGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVWRYLFTKPIAAF-KVTRSLAAKAFQTDLSLCKE 214 (322)
Q Consensus 137 ~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 214 (322)
|||.+++.++.+ +|+ +.++|++++.+.................... ............... ..
T Consensus 74 ~Gg~~a~~~a~~------------~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 138 (245)
T TIGR01738 74 LGGLVALHIAAT------------HPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFL---AL 138 (245)
T ss_pred HHHHHHHHHHHH------------CHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHH---HH
Confidence 999999999955 888 9999999876533211110000000000000 000000000000000 00
Q ss_pred cccCCccchHHHHHHHHHHhhcCCCcccc----hhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhc-Cce
Q 020741 215 TFFSSSMEDHLVLRYQELMKESSRMPLFD----LRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFY-GVL 289 (322)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~-~~~ 289 (322)
..............+...+.......... +..+........+.++++|+++++|++|.+++.+..+.+.+.+ +++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~ 218 (245)
T TIGR01738 139 QTLGTPTARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSE 218 (245)
T ss_pred HHhcCCccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCCe
Confidence 00000011111111111111111000000 1111111222345689999999999999999999888888777 499
Q ss_pred eEEecCCcccceeccchhhhHHHHHHHH
Q 020741 290 PVCVEGVAHDMMLDCSWEKGASVILSWL 317 (322)
Q Consensus 290 ~~~~~~~gH~~~~~~~~~~~~~~i~~fl 317 (322)
+++++++||++++++| +++++.|.+|+
T Consensus 219 ~~~~~~~gH~~~~e~p-~~~~~~i~~fi 245 (245)
T TIGR01738 219 LYIFAKAAHAPFLSHA-EAFCALLVAFK 245 (245)
T ss_pred EEEeCCCCCCccccCH-HHHHHHHHhhC
Confidence 9999999999999999 99999999996
No 32
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=5.5e-29 Score=200.88 Aligned_cols=283 Identities=22% Similarity=0.282 Sum_probs=170.3
Q ss_pred CceeEEEeCCCCc-eEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhC-CceEEEeCCCCCCCCC
Q 020741 24 GQTRVSHQLPSGL-NIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADS-GFDCYAVSLLGQGESD 101 (322)
Q Consensus 24 ~~~~~~~~~~~g~-~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~D~~G~G~S~ 101 (322)
......++.+.|. .+....++.... ....++..+++||++||++++...|+ ..+..|.+. |+.|+++|++|+|.++
T Consensus 24 ~~~~~~i~~~~g~~~~~~~w~~~~~~-~~~~~~~~~~pvlllHGF~~~~~~w~-~~~~~L~~~~~~~v~aiDl~G~g~~s 101 (326)
T KOG1454|consen 24 TLRSTSIEIPWGPLTIRSKWIPNLDK-YGSPGDKDKPPVLLLHGFGASSFSWR-RVVPLLSKAKGLRVLAIDLPGHGYSS 101 (326)
T ss_pred cccceEEEcccCCceeEEEEecccee-ccCCCCCCCCcEEEeccccCCcccHh-hhccccccccceEEEEEecCCCCcCC
Confidence 3455666776664 555555553310 11122257899999999999999998 677888765 5999999999999555
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEE---EeccCCCCC
Q 020741 102 APPGTVAGSLQTHAGDVADFIQKNLSLPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAV---LVCSVPPSG 177 (322)
Q Consensus 102 ~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~v---l~~~~~~~~ 177 (322)
..+....|+..++++-+..++.+....+++++|||+||.+|+.+|+. +|+ |++++ ++++.....
T Consensus 102 ~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~------------~P~~V~~lv~~~~~~~~~~~~ 169 (326)
T KOG1454|consen 102 PLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAY------------YPETVDSLVLLDLLGPPVYST 169 (326)
T ss_pred CCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHh------------CcccccceeeecccccccccC
Confidence 55444569999999999999995555889999999999999999965 999 99999 444432221
Q ss_pred CCcc-hhhhhhccchhhhHHHHHHhHhhh-cccc-ccccccccCCccchHHHHHHHHHHhhc-----CCCcccchh-hhh
Q 020741 178 NSGL-VWRYLFTKPIAAFKVTRSLAAKAF-QTDL-SLCKETFFSSSMEDHLVLRYQELMKES-----SRMPLFDLR-KLN 248 (322)
Q Consensus 178 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~ 248 (322)
.... ........................ .... .......................+... .......+. ...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (326)
T KOG1454|consen 170 PKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELL 249 (326)
T ss_pred CcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEecc
Confidence 1110 000000000000000000000000 0000 000000000000001111111111110 000001110 011
Q ss_pred --cCCCCCCCCCcc-ccEEEEeeCCCCccChhhHHHHhhhc-CceeEEecCCcccceeccchhhhHHHHHHHHhhhc
Q 020741 249 --ASLPVPSVPKSS-IKVLVLGAKDDFIVDAQGLSETGSFY-GVLPVCVEGVAHDMMLDCSWEKGASVILSWLDGLR 321 (322)
Q Consensus 249 --~~~~~~~~~~~~-~Pvl~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 321 (322)
.......++++. ||+|+++|++|+++|.+.+..+.+.. ++++++++++||.++.|.| +++++.|..|+..+.
T Consensus 250 ~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~P-e~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 250 GFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNAELVEIPGAGHLPHLERP-EEVAALLRSFIARLR 325 (326)
T ss_pred CccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCCCCcccccCCH-HHHHHHHHHHHHHhc
Confidence 122233345666 99999999999999999888888876 5999999999999999999 999999999998753
No 33
>PRK07581 hypothetical protein; Validated
Probab=99.97 E-value=6e-29 Score=205.70 Aligned_cols=264 Identities=11% Similarity=0.129 Sum_probs=153.5
Q ss_pred CCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchh---hHhhhCCceEEEeCCCCCCCCCCCCCC-CCC
Q 020741 34 SGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWL---PFFADSGFDCYAVSLLGQGESDAPPGT-VAG 109 (322)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~---~~l~~~g~~v~~~D~~G~G~S~~~~~~-~~~ 109 (322)
+|.+++|...|+. .....|+||++||++++...|. .++ +.|...+|+|+++|+||||.|..+... ..+
T Consensus 24 ~~~~l~y~~~G~~-------~~~~~~~vll~~~~~~~~~~~~-~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 95 (339)
T PRK07581 24 PDARLAYKTYGTL-------NAAKDNAILYPTWYSGTHQDNE-WLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPF 95 (339)
T ss_pred CCceEEEEecCcc-------CCCCCCEEEEeCCCCCCcccch-hhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCC
Confidence 6889999999952 0113456777777776666664 332 467656799999999999999865431 123
Q ss_pred CHH-----HHHHHHHH----HHHHhCC-CC-cEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCC
Q 020741 110 SLQ-----THAGDVAD----FIQKNLS-LP-PVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSG 177 (322)
Q Consensus 110 ~~~-----~~~~dl~~----~l~~~~~-~~-~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~ 177 (322)
+++ .+++|+.+ +++ .++ ++ ++|+||||||++|+.+|.+ +|+ |.++|++++.+...
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~l~~-~lgi~~~~~lvG~S~GG~va~~~a~~------------~P~~V~~Lvli~~~~~~~ 162 (339)
T PRK07581 96 NAARFPHVTIYDNVRAQHRLLTE-KFGIERLALVVGWSMGAQQTYHWAVR------------YPDMVERAAPIAGTAKTT 162 (339)
T ss_pred CCCCCCceeHHHHHHHHHHHHHH-HhCCCceEEEEEeCHHHHHHHHHHHH------------CHHHHhhheeeecCCCCC
Confidence 333 24566654 555 788 88 4799999999999999965 998 99999998765321
Q ss_pred CCcchh-h-h---hhc-----------cchhhhHHHHHHhHhhhccccccccccccCC---ccchHHHHHHHHHH-hhcC
Q 020741 178 NSGLVW-R-Y---LFT-----------KPIAAFKVTRSLAAKAFQTDLSLCKETFFSS---SMEDHLVLRYQELM-KESS 237 (322)
Q Consensus 178 ~~~~~~-~-~---~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~ 237 (322)
...... . . ... .+............... ............. ...++....+.... ....
T Consensus 163 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (339)
T PRK07581 163 PHNFVFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWG-FSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRD 241 (339)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHH-hHHHHHHhhhccccChhhHHHHHHHHHHHhhcccC
Confidence 110000 0 0 000 00000000000000000 0000000000000 00011111111111 1111
Q ss_pred CCcccch-hhhh-----c-----CCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhc-CceeEEecC-Ccccceecc
Q 020741 238 RMPLFDL-RKLN-----A-----SLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFY-GVLPVCVEG-VAHDMMLDC 304 (322)
Q Consensus 238 ~~~~~~~-~~~~-----~-----~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~-~gH~~~~~~ 304 (322)
....... ..+. . ......+.++++|+|+|+|++|..++++..+.+.+.+ +++++++++ +||+.+.++
T Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~ 321 (339)
T PRK07581 242 PNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQ 321 (339)
T ss_pred cccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccC
Confidence 1111000 0000 0 0122345689999999999999999999888888877 489999999 999999999
Q ss_pred chhhhHHHHHHHHhhh
Q 020741 305 SWEKGASVILSWLDGL 320 (322)
Q Consensus 305 ~~~~~~~~i~~fl~~~ 320 (322)
+ +++...|.+||++.
T Consensus 322 ~-~~~~~~~~~~~~~~ 336 (339)
T PRK07581 322 N-PADIAFIDAALKEL 336 (339)
T ss_pred c-HHHHHHHHHHHHHH
Confidence 9 99999999999875
No 34
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.97 E-value=6.6e-29 Score=205.96 Aligned_cols=262 Identities=15% Similarity=0.227 Sum_probs=157.8
Q ss_pred CCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhh-----------cccchh---hHhhhCCceEEEeCCCC--C
Q 020741 34 SGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWC-----------WAEHWL---PFFADSGFDCYAVSLLG--Q 97 (322)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~-----------~~~~~~---~~l~~~g~~v~~~D~~G--~ 97 (322)
+|.+|+|..+|+. ....+++|||+||++++... |. .++ ..|...+|+|+++|+|| |
T Consensus 14 ~~~~~~y~~~g~~-------~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~-~~~~~~~~l~~~~~~vi~~D~~G~~~ 85 (351)
T TIGR01392 14 SDVRVAYETYGTL-------NAERSNAVLVCHALTGDAHVAGYHDDGDPGWWD-DLIGPGRAIDTDRYFVVCSNVLGGCY 85 (351)
T ss_pred CCceEEEEecccc-------CCCCCCEEEEcCCcCcchhhcccCCCCCCCchh-hccCCCCCcCCCceEEEEecCCCCCC
Confidence 7889999999963 01246799999999887633 54 554 35545679999999999 5
Q ss_pred CCCCCCC---C-------CCCCCHHHHHHHHHHHHHHhCC-CC-cEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-c
Q 020741 98 GESDAPP---G-------TVAGSLQTHAGDVADFIQKNLS-LP-PVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-I 164 (322)
Q Consensus 98 G~S~~~~---~-------~~~~~~~~~~~dl~~~l~~~~~-~~-~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v 164 (322)
|.|.... . ...++++++++++.++++ .++ ++ ++++||||||++++.+|.+ +|+ +
T Consensus 86 g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~l~G~S~Gg~ia~~~a~~------------~p~~v 152 (351)
T TIGR01392 86 GSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLD-HLGIEQIAAVVGGSMGGMQALEWAID------------YPERV 152 (351)
T ss_pred CCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHH-HcCCCCceEEEEECHHHHHHHHHHHH------------ChHhh
Confidence 5554311 0 124789999999999999 788 77 9999999999999999965 888 9
Q ss_pred ceEEEeccCCCCCCCcchhh-----hhhcc-------------chhhhHHHHHHhHhhhccccccccccccCCcc-----
Q 020741 165 AGAVLVCSVPPSGNSGLVWR-----YLFTK-------------PIAAFKVTRSLAAKAFQTDLSLCKETFFSSSM----- 221 (322)
Q Consensus 165 ~~~vl~~~~~~~~~~~~~~~-----~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 221 (322)
+++|++++.+.......... ..... +................ ........+.....
T Consensus 153 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~f~~~~~~~~~~ 231 (351)
T TIGR01392 153 RAIVVLATSARHSAWCIAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYR-SEESMAERFGRAPQSGESP 231 (351)
T ss_pred heEEEEccCCcCCHHHHHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcC-CHHHHHHHhCcCccccccc
Confidence 99999998654322110000 00000 00000000000000000 00000000000000
Q ss_pred -----chHHHHHHH-----HHHhhcCCCcccch-hhhhcC-------CCCCCCCCccccEEEEeeCCCCccChhhHHHHh
Q 020741 222 -----EDHLVLRYQ-----ELMKESSRMPLFDL-RKLNAS-------LPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETG 283 (322)
Q Consensus 222 -----~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~ 283 (322)
.......+. .............. ..+... ...+.+++|++|+|+|+|++|.++|++..+.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a 311 (351)
T TIGR01392 232 ASGFDTRFQVESYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELA 311 (351)
T ss_pred ccccCccchHHHHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHH
Confidence 000011111 01111111000000 011111 112456789999999999999999999999998
Q ss_pred hhcC-ceeE-----EecCCcccceeccchhhhHHHHHHHHh
Q 020741 284 SFYG-VLPV-----CVEGVAHDMMLDCSWEKGASVILSWLD 318 (322)
Q Consensus 284 ~~~~-~~~~-----~~~~~gH~~~~~~~~~~~~~~i~~fl~ 318 (322)
+.++ .+++ +++++||++++++| +++++.|.+||+
T Consensus 312 ~~i~~~~~~v~~~~i~~~~GH~~~le~p-~~~~~~l~~FL~ 351 (351)
T TIGR01392 312 KALPAAGLRVTYVEIESPYGHDAFLVET-DQVEELIRGFLR 351 (351)
T ss_pred HHHhhcCCceEEEEeCCCCCcchhhcCH-HHHHHHHHHHhC
Confidence 8874 5544 45789999999999 999999999984
No 35
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=9.7e-28 Score=200.98 Aligned_cols=257 Identities=19% Similarity=0.191 Sum_probs=150.2
Q ss_pred eEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCH----H
Q 020741 37 NIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSL----Q 112 (322)
Q Consensus 37 ~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~----~ 112 (322)
++.+..+... .++|+|||+||++++...|. ..++.|+++ |+|+++|+||||.|+.+... ..+. +
T Consensus 93 ~~~~~~~~~~---------~~~p~vvllHG~~~~~~~~~-~~~~~L~~~-~~vi~~D~rG~G~S~~~~~~-~~~~~~~~~ 160 (402)
T PLN02894 93 FINTVTFDSK---------EDAPTLVMVHGYGASQGFFF-RNFDALASR-FRVIAIDQLGWGGSSRPDFT-CKSTEETEA 160 (402)
T ss_pred eEEEEEecCC---------CCCCEEEEECCCCcchhHHH-HHHHHHHhC-CEEEEECCCCCCCCCCCCcc-cccHHHHHH
Confidence 6666555533 46789999999999888887 567888765 99999999999999765431 1121 2
Q ss_pred HHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcchhhhhhc-c
Q 020741 113 THAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVWRYLFT-K 189 (322)
Q Consensus 113 ~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~~~~~~-~ 189 (322)
.+++++.++++ .++ ++++|+||||||.+++.+|.+ +|+ ++++|++++................ .
T Consensus 161 ~~~~~i~~~~~-~l~~~~~~lvGhS~GG~la~~~a~~------------~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~ 227 (402)
T PLN02894 161 WFIDSFEEWRK-AKNLSNFILLGHSFGGYVAAKYALK------------HPEHVQHLILVGPAGFSSESDDKSEWLTKFR 227 (402)
T ss_pred HHHHHHHHHHH-HcCCCCeEEEEECHHHHHHHHHHHh------------CchhhcEEEEECCccccCCcchhHHHHhhcc
Confidence 35667778877 667 899999999999999999955 887 9999999876433222111000000 0
Q ss_pred c-hh-------------hhHHHHHH---hHhhhcccc-ccccccccCCccchHH---HHHHHHHHhhcCCCcc------c
Q 020741 190 P-IA-------------AFKVTRSL---AAKAFQTDL-SLCKETFFSSSMEDHL---VLRYQELMKESSRMPL------F 242 (322)
Q Consensus 190 ~-~~-------------~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~------~ 242 (322)
. .. ........ ......... ............+.+. +..+............ .
T Consensus 228 ~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (402)
T PLN02894 228 ATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIF 307 (402)
T ss_pred hhHHHHHHHHHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhc
Confidence 0 00 00000000 000000000 0000000000011111 1111111111110000 0
Q ss_pred chhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhc--CceeEEecCCcccceeccchhhhHHHHHHHHhhh
Q 020741 243 DLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFY--GVLPVCVEGVAHDMMLDCSWEKGASVILSWLDGL 320 (322)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 320 (322)
....+........+.++++|+++|+|++|.+.+ .....+.+.. +.++++++++||+++.|+| ++|++.|.+|++..
T Consensus 308 ~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P-~~f~~~l~~~~~~~ 385 (402)
T PLN02894 308 SFGAFARKPLLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNP-SGFHSAVLYACRKY 385 (402)
T ss_pred cCchhhcchHhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCH-HHHHHHHHHHHHHh
Confidence 000011122234467889999999999998765 4444444444 3889999999999999999 99999999988764
No 36
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.96 E-value=5.2e-29 Score=197.82 Aligned_cols=242 Identities=22% Similarity=0.312 Sum_probs=148.1
Q ss_pred CCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHhCC-CCcEEEEe
Q 020741 58 RPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGD-VADFIQKNLS-LPPVLLGH 135 (322)
Q Consensus 58 ~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~d-l~~~l~~~~~-~~~~lvG~ 135 (322)
+|+|||+||++++...|. .+++.|+ +||+|+++|+||+|.|..+......++++.+++ +..+++ .++ ++++++||
T Consensus 1 ~~~vv~~hG~~~~~~~~~-~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~G~ 77 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQ-ALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLD-QLGIEPFFLVGY 77 (251)
T ss_pred CCEEEEEcCCCCchhhHH-HHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHH-HcCCCeEEEEEe
Confidence 378999999999999997 8899998 689999999999999987654445788999999 666666 666 89999999
Q ss_pred chhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcchhhhhhccchhhhHHHHHHhHhhhccccccccc
Q 020741 136 SFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKE 214 (322)
Q Consensus 136 S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (322)
|+||.+++.+|.+ +|+ +.+++++++.+.................................... ..
T Consensus 78 S~Gg~ia~~~a~~------------~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 143 (251)
T TIGR03695 78 SMGGRIALYYALQ------------YPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQ--QP 143 (251)
T ss_pred ccHHHHHHHHHHh------------CchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhc--Cc
Confidence 9999999999965 787 99999998754322111000000000000000000000000000000 00
Q ss_pred cccC-CccchHHHHHHHHHHhhcCCCcccch-hh---hhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhc-Cc
Q 020741 215 TFFS-SSMEDHLVLRYQELMKESSRMPLFDL-RK---LNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFY-GV 288 (322)
Q Consensus 215 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~-~~ 288 (322)
.+.. ...+......+............... .. .........+.++++|+++++|++|..++ +..+.+.+.. +.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~ 222 (251)
T TIGR03695 144 LFASQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPNL 222 (251)
T ss_pred eeeecccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCCC
Confidence 0000 00111111111111110000000000 00 00111123345789999999999998764 4455566555 48
Q ss_pred eeEEecCCcccceeccchhhhHHHHHHHHh
Q 020741 289 LPVCVEGVAHDMMLDCSWEKGASVILSWLD 318 (322)
Q Consensus 289 ~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 318 (322)
++++++++||+++++++ +++.+.|.+||+
T Consensus 223 ~~~~~~~~gH~~~~e~~-~~~~~~i~~~l~ 251 (251)
T TIGR03695 223 TLVIIANAGHNIHLENP-EAFAKILLAFLE 251 (251)
T ss_pred cEEEEcCCCCCcCccCh-HHHHHHHHHHhC
Confidence 99999999999999999 999999999984
No 37
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.96 E-value=7.5e-28 Score=196.11 Aligned_cols=124 Identities=17% Similarity=0.195 Sum_probs=101.0
Q ss_pred eeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCC
Q 020741 26 TRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPG 105 (322)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~ 105 (322)
...++...||.+++|...|++ ++++|||+||++++...+ .+...+...+|+|+++|+||||.|.....
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~~----------~~~~lvllHG~~~~~~~~--~~~~~~~~~~~~vi~~D~~G~G~S~~~~~ 72 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGNP----------DGKPVVFLHGGPGSGTDP--GCRRFFDPETYRIVLFDQRGCGKSTPHAC 72 (306)
T ss_pred cCCeEEcCCCcEEEEEECcCC----------CCCEEEEECCCCCCCCCH--HHHhccCccCCEEEEECCCCCCCCCCCCC
Confidence 356888889999999998855 567899999987765443 23445545679999999999999986643
Q ss_pred CCCCCHHHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCC
Q 020741 106 TVAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVP 174 (322)
Q Consensus 106 ~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~ 174 (322)
...++.+++++|+..+++ .++ ++++++||||||.+++.++.+ +|+ ++++|++++..
T Consensus 73 ~~~~~~~~~~~dl~~l~~-~l~~~~~~lvG~S~GG~ia~~~a~~------------~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 73 LEENTTWDLVADIEKLRE-KLGIKNWLVFGGSWGSTLALAYAQT------------HPEVVTGLVLRGIFL 130 (306)
T ss_pred cccCCHHHHHHHHHHHHH-HcCCCCEEEEEECHHHHHHHHHHHH------------ChHhhhhheeecccc
Confidence 334678899999999998 777 889999999999999999965 887 89999998754
No 38
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=3.5e-28 Score=203.00 Aligned_cols=264 Identities=13% Similarity=0.180 Sum_probs=158.6
Q ss_pred CCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcc------------cchh---hHhhhCCceEEEeCCCCC-
Q 020741 34 SGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWA------------EHWL---PFFADSGFDCYAVSLLGQ- 97 (322)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~------------~~~~---~~l~~~g~~v~~~D~~G~- 97 (322)
+|.+++|..+|.. +...+|+|||+||++++...|. ..++ ..|...+|+|+++|++|+
T Consensus 31 ~~~~~~y~~~G~~-------~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~ 103 (379)
T PRK00175 31 PPVELAYETYGTL-------NADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGC 103 (379)
T ss_pred CCceEEEEecccc-------CCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCC
Confidence 5678899999953 0124689999999999887532 2343 133245699999999983
Q ss_pred CCCCCCCC------------CCCCCHHHHHHHHHHHHHHhCC-CC-cEEEEechhHHHHHHHHHHHhhhhhccccCCCCC
Q 020741 98 GESDAPPG------------TVAGSLQTHAGDVADFIQKNLS-LP-PVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE 163 (322)
Q Consensus 98 G~S~~~~~------------~~~~~~~~~~~dl~~~l~~~~~-~~-~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~ 163 (322)
|.|+.+.. ...++++++++++.++++ .++ ++ ++++||||||++++.+|.+ +|+
T Consensus 104 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~l~~~~~~~lvG~S~Gg~ia~~~a~~------------~p~ 170 (379)
T PRK00175 104 KGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLD-ALGITRLAAVVGGSMGGMQALEWAID------------YPD 170 (379)
T ss_pred CCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHH-HhCCCCceEEEEECHHHHHHHHHHHh------------ChH
Confidence 55543221 014799999999999999 788 78 4899999999999999965 888
Q ss_pred -cceEEEeccCCCCCCCcc-hh----hhhhcc--------------chhhhHHHHH----------HhHhhhcccccccc
Q 020741 164 -IAGAVLVCSVPPSGNSGL-VW----RYLFTK--------------PIAAFKVTRS----------LAAKAFQTDLSLCK 213 (322)
Q Consensus 164 -v~~~vl~~~~~~~~~~~~-~~----~~~~~~--------------~~~~~~~~~~----------~~~~~~~~~~~~~~ 213 (322)
|+++|++++.+....... +. ...... +......... .....+........
T Consensus 171 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~ 250 (379)
T PRK00175 171 RVRSALVIASSARLSAQNIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGE 250 (379)
T ss_pred hhhEEEEECCCcccCHHHHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccc
Confidence 999999998654322111 00 000000 0000000000 00000000000000
Q ss_pred c-cccCCccchHHHHHHHH-----HHhhcCCCcccc-hhhhhcC--------CCCCCCCCccccEEEEeeCCCCccChhh
Q 020741 214 E-TFFSSSMEDHLVLRYQE-----LMKESSRMPLFD-LRKLNAS--------LPVPSVPKSSIKVLVLGAKDDFIVDAQG 278 (322)
Q Consensus 214 ~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~--------~~~~~~~~~~~Pvl~i~g~~D~~~~~~~ 278 (322)
. ..+. .......+.. ............ ...+... .....+.+|++|+|+|+|++|.++|++.
T Consensus 251 ~~~~~~---~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~ 327 (379)
T PRK00175 251 LPFGFD---VEFQVESYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPAR 327 (379)
T ss_pred cccCCC---ccchHHHHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHH
Confidence 0 0000 0000111110 011110000000 0011000 1123456899999999999999999999
Q ss_pred HHHHhhhcC-c----eeEEec-CCcccceeccchhhhHHHHHHHHhhhc
Q 020741 279 LSETGSFYG-V----LPVCVE-GVAHDMMLDCSWEKGASVILSWLDGLR 321 (322)
Q Consensus 279 ~~~~~~~~~-~----~~~~~~-~~gH~~~~~~~~~~~~~~i~~fl~~~~ 321 (322)
.+.+.+.++ . ++++++ ++||+.++++| +++++.|.+||+++.
T Consensus 328 ~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p-~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 328 SREIVDALLAAGADVSYAEIDSPYGHDAFLLDD-PRYGRLVRAFLERAA 375 (379)
T ss_pred HHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCH-HHHHHHHHHHHHhhh
Confidence 998888874 4 677775 89999999999 999999999998865
No 39
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.96 E-value=1.7e-29 Score=197.63 Aligned_cols=217 Identities=27% Similarity=0.397 Sum_probs=142.9
Q ss_pred EEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEechhH
Q 020741 61 LVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGG 139 (322)
Q Consensus 61 vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg 139 (322)
|||+||++++...|. .+++.|+ +||+|+++|+||+|.|........++++++++|+.++++ .++ ++++++|||+||
T Consensus 1 vv~~hG~~~~~~~~~-~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~lvG~S~Gg 77 (228)
T PF12697_consen 1 VVFLHGFGGSSESWD-PLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLD-ALGIKKVILVGHSMGG 77 (228)
T ss_dssp EEEE-STTTTGGGGH-HHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHH-HTTTSSEEEEEETHHH
T ss_pred eEEECCCCCCHHHHH-HHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccc-cccccccccccccccc
Confidence 799999999999997 7899995 789999999999999988764335799999999999999 677 999999999999
Q ss_pred HHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCc--c-hhhhhhccchhhhHHHHHHhHhhhcccccccccc
Q 020741 140 LIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSG--L-VWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKET 215 (322)
Q Consensus 140 ~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (322)
.+++.++.+ +|+ |+++|++++........ . .......................+...
T Consensus 78 ~~a~~~a~~------------~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 138 (228)
T PF12697_consen 78 MIALRLAAR------------YPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRW------- 138 (228)
T ss_dssp HHHHHHHHH------------SGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
T ss_pred ccccccccc------------cccccccceeecccccccccccccccchhhhhhhhccccccccccccccccc-------
Confidence 999999966 887 99999999865321111 0 000000000000000000000000000
Q ss_pred ccCCccchH----HHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhc-Ccee
Q 020741 216 FFSSSMEDH----LVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFY-GVLP 290 (322)
Q Consensus 216 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~-~~~~ 290 (322)
........ ....+...+... .........+.++++|+++++|++|.+++.+..+.+.+.. ++++
T Consensus 139 -~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~ 207 (228)
T PF12697_consen 139 -FDGDEPEDLIRSSRRALAEYLRSN----------LWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNAEL 207 (228)
T ss_dssp -HTHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEEE
T ss_pred -cccccccccccccccccccccccc----------cccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCEE
Confidence 00000000 001111111100 0000011223467999999999999999988888888766 5999
Q ss_pred EEecCCcccceeccchhhhHH
Q 020741 291 VCVEGVAHDMMLDCSWEKGAS 311 (322)
Q Consensus 291 ~~~~~~gH~~~~~~~~~~~~~ 311 (322)
++++++||++++++| +++++
T Consensus 208 ~~~~~~gH~~~~~~p-~~~~~ 227 (228)
T PF12697_consen 208 VVIPGAGHFLFLEQP-DEVAE 227 (228)
T ss_dssp EEETTSSSTHHHHSH-HHHHH
T ss_pred EEECCCCCccHHHCH-HHHhc
Confidence 999999999999999 88875
No 40
>PLN02511 hydrolase
Probab=99.96 E-value=6.5e-28 Score=201.29 Aligned_cols=275 Identities=16% Similarity=0.165 Sum_probs=158.1
Q ss_pred CCceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhh-cccchhhHhhhCCceEEEeCCCCCCCCC
Q 020741 23 QGQTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWC-WAEHWLPFFADSGFDCYAVSLLGQGESD 101 (322)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~-~~~~~~~~l~~~g~~v~~~D~~G~G~S~ 101 (322)
..+++..+.++||..+.+....+. .+....++|+||++||+++++.. |...++..+.++||+|+++|+||||.|.
T Consensus 69 ~~~~re~l~~~DG~~~~ldw~~~~----~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~ 144 (388)
T PLN02511 69 VRYRRECLRTPDGGAVALDWVSGD----DRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSP 144 (388)
T ss_pred CceeEEEEECCCCCEEEEEecCcc----cccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCC
Confidence 346778899999998887544321 00112367899999999766543 5435667777789999999999999997
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHH---hCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC---cceEEEeccCC
Q 020741 102 APPGTVAGSLQTHAGDVADFIQK---NLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE---IAGAVLVCSVP 174 (322)
Q Consensus 102 ~~~~~~~~~~~~~~~dl~~~l~~---~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~---v~~~vl~~~~~ 174 (322)
.... .......++|+.++++. ..+ .+++++||||||.+++.++.+ +|+ |.++++++++.
T Consensus 145 ~~~~--~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~------------~~~~~~v~~~v~is~p~ 210 (388)
T PLN02511 145 VTTP--QFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGE------------EGENCPLSGAVSLCNPF 210 (388)
T ss_pred CCCc--CEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHh------------cCCCCCceEEEEECCCc
Confidence 6543 22234556666666662 234 689999999999999999966 443 78888886543
Q ss_pred CCCCCc-chhhhhhccchhhhHHHHHHhHhhhccccccccc--cccCC-cc-chHHHHHHHHHHhhcCCCcccchhh-hh
Q 020741 175 PSGNSG-LVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKE--TFFSS-SM-EDHLVLRYQELMKESSRMPLFDLRK-LN 248 (322)
Q Consensus 175 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 248 (322)
...... ....... ... ..................... ..+.. .. ....+..+...+.... ........ +.
T Consensus 211 ~l~~~~~~~~~~~~--~~y-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~-~gf~~~~~yy~ 286 (388)
T PLN02511 211 DLVIADEDFHKGFN--NVY-DKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVS-FGFKSVDAYYS 286 (388)
T ss_pred CHHHHHHHHhccHH--HHH-HHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhc-CCCCCHHHHHH
Confidence 210000 0000000 000 000000000000000000000 00000 00 0001112222222111 11111111 12
Q ss_pred cCCCCCCCCCccccEEEEeeCCCCccChhhH-HHHhhhc-CceeEEecCCcccceeccchhh------hHHHHHHHHhhh
Q 020741 249 ASLPVPSVPKSSIKVLVLGAKDDFIVDAQGL-SETGSFY-GVLPVCVEGVAHDMMLDCSWEK------GASVILSWLDGL 320 (322)
Q Consensus 249 ~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~-~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~------~~~~i~~fl~~~ 320 (322)
.......+.++++|+|+|+|++|++++.+.. ....+.. ++++++++++||+.++|.+ +. +.+.+.+||+.+
T Consensus 287 ~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p-~~~~~~~w~~~~i~~Fl~~~ 365 (388)
T PLN02511 287 NSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGP-EAPFGAPWTDPVVMEFLEAL 365 (388)
T ss_pred HcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCC-CCCCCCccHHHHHHHHHHHH
Confidence 3334566789999999999999999997754 3344444 5899999999999999998 54 589999999765
No 41
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.96 E-value=1.5e-27 Score=200.45 Aligned_cols=248 Identities=19% Similarity=0.234 Sum_probs=159.1
Q ss_pred EEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCC
Q 020741 29 SHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVA 108 (322)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~ 108 (322)
.+.. ++.+++|..+++. ++++|||+||++++...|. .+.+.|.+. |+|+++|+||||.|..... .
T Consensus 113 ~~~~-~~~~i~~~~~g~~----------~~~~vl~~HG~~~~~~~~~-~~~~~l~~~-~~v~~~d~~g~G~s~~~~~--~ 177 (371)
T PRK14875 113 KARI-GGRTVRYLRLGEG----------DGTPVVLIHGFGGDLNNWL-FNHAALAAG-RPVIALDLPGHGASSKAVG--A 177 (371)
T ss_pred cceE-cCcEEEEecccCC----------CCCeEEEECCCCCccchHH-HHHHHHhcC-CEEEEEcCCCCCCCCCCCC--C
Confidence 3444 6778888888754 6789999999999999997 788888765 9999999999999976544 5
Q ss_pred CCHHHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCc-chhhh
Q 020741 109 GSLQTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSG-LVWRY 185 (322)
Q Consensus 109 ~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~-~~~~~ 185 (322)
.++.++++++.++++ .++ .+++++|||+||.+++.+|.+ +|+ +.+++++++........ .....
T Consensus 178 ~~~~~~~~~~~~~~~-~~~~~~~~lvG~S~Gg~~a~~~a~~------------~~~~v~~lv~~~~~~~~~~~~~~~~~~ 244 (371)
T PRK14875 178 GSLDELAAAVLAFLD-ALGIERAHLVGHSMGGAVALRLAAR------------APQRVASLTLIAPAGLGPEINGDYIDG 244 (371)
T ss_pred CCHHHHHHHHHHHHH-hcCCccEEEEeechHHHHHHHHHHh------------CchheeEEEEECcCCcCcccchhHHHH
Confidence 789999999999999 677 899999999999999999954 776 99999998753221111 00000
Q ss_pred hhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCC-Ccccchhh------hhcCCCCCCCCC
Q 020741 186 LFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSR-MPLFDLRK------LNASLPVPSVPK 258 (322)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~ 258 (322)
+.... ............+... .................... .....+.. .........+.+
T Consensus 245 ~~~~~--~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 312 (371)
T PRK14875 245 FVAAE--SRRELKPVLELLFADP----------ALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLAS 312 (371)
T ss_pred hhccc--chhHHHHHHHHHhcCh----------hhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhc
Confidence 00000 0000000110000000 00011111100000000000 00000000 000001112457
Q ss_pred ccccEEEEeeCCCCccChhhHHHHhhhcCceeEEecCCcccceeccchhhhHHHHHHHHhh
Q 020741 259 SSIKVLVLGAKDDFIVDAQGLSETGSFYGVLPVCVEGVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 259 ~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
+++|+|+++|++|.+++.+..+.+.. +.++.+++++||++++++| +++.+.|.+||++
T Consensus 313 i~~Pvlii~g~~D~~vp~~~~~~l~~--~~~~~~~~~~gH~~~~e~p-~~~~~~i~~fl~~ 370 (371)
T PRK14875 313 LAIPVLVIWGEQDRIIPAAHAQGLPD--GVAVHVLPGAGHMPQMEAA-ADVNRLLAEFLGK 370 (371)
T ss_pred CCCCEEEEEECCCCccCHHHHhhccC--CCeEEEeCCCCCChhhhCH-HHHHHHHHHHhcc
Confidence 89999999999999999877655432 4888999999999999999 9999999999975
No 42
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.96 E-value=3.5e-28 Score=175.85 Aligned_cols=224 Identities=17% Similarity=0.154 Sum_probs=157.4
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--CC-CCcEEE
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKN--LS-LPPVLL 133 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~--~~-~~~~lv 133 (322)
.+..|||+||+.++..... .+.++|.++||.|.++.+||||.....-- ..++++|.+++.+..+.. .+ +.|.++
T Consensus 14 G~~AVLllHGFTGt~~Dvr-~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl--~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~ 90 (243)
T COG1647 14 GNRAVLLLHGFTGTPRDVR-MLGRYLNENGYTVYAPRYPGHGTLPEDFL--KTTPRDWWEDVEDGYRDLKEAGYDEIAVV 90 (243)
T ss_pred CCEEEEEEeccCCCcHHHH-HHHHHHHHCCceEecCCCCCCCCCHHHHh--cCCHHHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 4478999999999999997 89999999999999999999998865443 568888888887766632 24 899999
Q ss_pred EechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCcchhhhhhccchhhhHHHHHHhHhhhcccccccc
Q 020741 134 GHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCK 213 (322)
Q Consensus 134 G~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (322)
|.||||.+++.+|.. +| ++++|.+|++.............. .......+
T Consensus 91 GlSmGGv~alkla~~------------~p-~K~iv~m~a~~~~k~~~~iie~~l--------~y~~~~kk---------- 139 (243)
T COG1647 91 GLSMGGVFALKLAYH------------YP-PKKIVPMCAPVNVKSWRIIIEGLL--------EYFRNAKK---------- 139 (243)
T ss_pred eecchhHHHHHHHhh------------CC-ccceeeecCCcccccchhhhHHHH--------HHHHHhhh----------
Confidence 999999999999954 77 899999987543222211111000 00000000
Q ss_pred ccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcC---cee
Q 020741 214 ETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG---VLP 290 (322)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~---~~~ 290 (322)
-...+.+........+..........+..+.. .....+..|..|++++.|.+|+.++.+.+..+.+... .++
T Consensus 140 ----~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i~-~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL 214 (243)
T COG1647 140 ----YEGKDQEQIDKEMKSYKDTPMTTTAQLKKLIK-DARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKEL 214 (243)
T ss_pred ----ccCCCHHHHHHHHHHhhcchHHHHHHHHHHHH-HHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCccee
Confidence 01112333333333222222211112222111 1233456899999999999999999999999988873 999
Q ss_pred EEecCCcccceeccchhhhHHHHHHHHhh
Q 020741 291 VCVEGVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 291 ~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
.+++++||.+..+..++++.+.|..||+.
T Consensus 215 ~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 215 KWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred EEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 99999999999998889999999999974
No 43
>PRK05855 short chain dehydrogenase; Validated
Probab=99.96 E-value=1.4e-27 Score=212.32 Aligned_cols=266 Identities=19% Similarity=0.192 Sum_probs=158.6
Q ss_pred EEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCC
Q 020741 28 VSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTV 107 (322)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~ 107 (322)
.++...+|.+|+|..+|+. ++|+|||+||++++...|. .+.+.| ..||+|+++|+||||.|..+....
T Consensus 5 ~~~~~~~g~~l~~~~~g~~----------~~~~ivllHG~~~~~~~w~-~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~ 72 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDP----------DRPTVVLVHGYPDNHEVWD-GVAPLL-ADRFRVVAYDVRGAGRSSAPKRTA 72 (582)
T ss_pred EEEEeeCCEEEEEEEcCCC----------CCCeEEEEcCCCchHHHHH-HHHHHh-hcceEEEEecCCCCCCCCCCCccc
Confidence 3444458999999999865 6789999999999999997 788888 457999999999999998765434
Q ss_pred CCCHHHHHHHHHHHHHHhCC--CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcchhh
Q 020741 108 AGSLQTHAGDVADFIQKNLS--LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVWR 184 (322)
Q Consensus 108 ~~~~~~~~~dl~~~l~~~~~--~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~~ 184 (322)
.++++++++|+.++++ .++ .+++|+||||||.+++.++.+ ...+. +..++.+++............
T Consensus 73 ~~~~~~~a~dl~~~i~-~l~~~~~~~lvGhS~Gg~~a~~~a~~----------~~~~~~v~~~~~~~~~~~~~~~~~~~~ 141 (582)
T PRK05855 73 AYTLARLADDFAAVID-AVSPDRPVHLLAHDWGSIQGWEAVTR----------PRAAGRIASFTSVSGPSLDHVGFWLRS 141 (582)
T ss_pred ccCHHHHHHHHHHHHH-HhCCCCcEEEEecChHHHHHHHHHhC----------ccchhhhhhheeccCCchHHHHHHHhh
Confidence 6899999999999999 665 459999999999999988844 12343 444444443211000000000
Q ss_pred hhhc-cchhhhHHHHHHhHhh---hccccccccccccCCccchHHHHHHHHHHhhcC-------------CCcccchh-h
Q 020741 185 YLFT-KPIAAFKVTRSLAAKA---FQTDLSLCKETFFSSSMEDHLVLRYQELMKESS-------------RMPLFDLR-K 246 (322)
Q Consensus 185 ~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~-~ 246 (322)
.... .+.............. ....... ........... ............. ......+. .
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (582)
T PRK05855 142 GLRRPTPRRLARALGQLLRSWYIYLFHLPVL-PELLWRLGLGR-AWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRAN 219 (582)
T ss_pred cccccchhhhhHHHHHHhhhHHHHHHhCCCC-cHHHhccchhh-HHHHhhhhccCCCcchhhhhhhhccccchHHHHHhh
Confidence 0000 0000000000000000 0000000 00000000000 0000000000000 00000000 0
Q ss_pred hhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcC-ceeEEecCCcccceeccchhhhHHHHHHHHhhh
Q 020741 247 LNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG-VLPVCVEGVAHDMMLDCSWEKGASVILSWLDGL 320 (322)
Q Consensus 247 ~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 320 (322)
.........+..+++|+++|+|++|.+++.+..+.+.+..+ .++++++ +||+++.|+| +++.+.|.+|+++.
T Consensus 220 ~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p-~~~~~~i~~fl~~~ 292 (582)
T PRK05855 220 MIRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIK-AGHWLPMSHP-QVLAAAVAEFVDAV 292 (582)
T ss_pred hhhhhccCccCCccCceEEEEeCCCcccCHHHhccccccCCcceEEEcc-CCCcchhhCh-hHHHHHHHHHHHhc
Confidence 00111122245689999999999999999988888877664 7777776 6999999999 99999999999864
No 44
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.95 E-value=2.1e-27 Score=194.43 Aligned_cols=271 Identities=16% Similarity=0.191 Sum_probs=159.6
Q ss_pred EeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchh-h------------------------cccchhhHhhh
Q 020741 30 HQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAW-C------------------------WAEHWLPFFAD 84 (322)
Q Consensus 30 ~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~-~------------------------~~~~~~~~l~~ 84 (322)
+...||.+|+++.|.++ +.+.+|+++||++.+.. . |.+.+++.|.+
T Consensus 2 ~~~~~g~~l~~~~~~~~---------~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~ 72 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK---------NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNK 72 (332)
T ss_pred ccCCCCCeEEEeeeecc---------CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHH
Confidence 45669999999999865 46789999999987765 2 11257899999
Q ss_pred CCceEEEeCCCCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHh----------------------C--CCCcEEEEechh
Q 020741 85 SGFDCYAVSLLGQGESDAPPG--TVAGSLQTHAGDVADFIQKN----------------------L--SLPPVLLGHSFG 138 (322)
Q Consensus 85 ~g~~v~~~D~~G~G~S~~~~~--~~~~~~~~~~~dl~~~l~~~----------------------~--~~~~~lvG~S~G 138 (322)
+||+|+++|+||||.|..... ....+++++++|+.++++.. . +.|++|+|||||
T Consensus 73 ~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmG 152 (332)
T TIGR01607 73 NGYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMG 152 (332)
T ss_pred CCCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCc
Confidence 999999999999999986532 12248999999999988742 1 357999999999
Q ss_pred HHHHHHHHHHHhhhhhccccCCC-CCcceEEEeccCCCCCCCcchhhhhhccchhhhHHHHHHhHhhhcccccccccccc
Q 020741 139 GLIIQYYIARIRNEKMLEMETPY-PEIAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFF 217 (322)
Q Consensus 139 g~~a~~~a~~~~~~~~~~~~~~~-p~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (322)
|.+++.++.+.++..- ... ..++++|++++............ ........... ............ .....+
T Consensus 153 g~i~~~~~~~~~~~~~----~~~~~~i~g~i~~s~~~~i~~~~~~~~--~~~~~~~~~l~-~~~~~~~p~~~~-~~~~~~ 224 (332)
T TIGR01607 153 GNIALRLLELLGKSNE----NNDKLNIKGCISLSGMISIKSVGSDDS--FKFKYFYLPVM-NFMSRVFPTFRI-SKKIRY 224 (332)
T ss_pred cHHHHHHHHHhccccc----cccccccceEEEeccceEEecccCCCc--chhhhhHHHHH-HHHHHHCCcccc-cCcccc
Confidence 9999999865321100 001 13888888887531100000000 00000000000 000111110000 000000
Q ss_pred CCccchHHHHHHHHHHhhc-CCCcccchhhhhcC--CCCCCCCCc--cccEEEEeeCCCCccChhhHHHHhhhc---Cce
Q 020741 218 SSSMEDHLVLRYQELMKES-SRMPLFDLRKLNAS--LPVPSVPKS--SIKVLVLGAKDDFIVDAQGLSETGSFY---GVL 289 (322)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~--~~Pvl~i~g~~D~~~~~~~~~~~~~~~---~~~ 289 (322)
. .++...+.+...-... .......+..+... .....+..+ ++|+|+++|++|.+++++.++.+.+.. +++
T Consensus 225 ~--~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~ 302 (332)
T TIGR01607 225 E--KSPYVNDIIKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKE 302 (332)
T ss_pred c--cChhhhhHHhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcE
Confidence 0 0111111111100000 00000011111000 001122334 799999999999999999988887665 388
Q ss_pred eEEecCCcccceeccchhhhHHHHHHHHhh
Q 020741 290 PVCVEGVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 290 ~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
++++++++|.++.|..++++.+.|.+||+.
T Consensus 303 l~~~~g~~H~i~~E~~~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 303 LHTLEDMDHVITIEPGNEEVLKKIIEWISN 332 (332)
T ss_pred EEEECCCCCCCccCCCHHHHHHHHHHHhhC
Confidence 999999999999987568999999999963
No 45
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.95 E-value=1.4e-26 Score=221.72 Aligned_cols=245 Identities=17% Similarity=0.179 Sum_probs=151.0
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCC------CCCCCHHHHHHHHHHHHHHhCC-CC
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPG------TVAGSLQTHAGDVADFIQKNLS-LP 129 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~------~~~~~~~~~~~dl~~~l~~~~~-~~ 129 (322)
.+++|||+||++++...|. .+++.|.+. |+|+++|+||||.|..... ...++++.+++++.++++ .++ ++
T Consensus 1370 ~~~~vVllHG~~~s~~~w~-~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~-~l~~~~ 1446 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWI-PIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIE-HITPGK 1446 (1655)
T ss_pred CCCeEEEECCCCCCHHHHH-HHHHHHhCC-CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHH-HhCCCC
Confidence 5689999999999999997 788889765 9999999999999976431 224789999999999999 677 99
Q ss_pred cEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcchhhhhhccchhhhHHHHH-HhHhhhcc
Q 020741 130 PVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRS-LAAKAFQT 207 (322)
Q Consensus 130 ~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 207 (322)
++|+||||||.+++.++.+ +|+ |+++|++++.+...... .................. ........
T Consensus 1447 v~LvGhSmGG~iAl~~A~~------------~P~~V~~lVlis~~p~~~~~~-~~~~~~~~~~~~~~~l~~~g~~~~~~~ 1513 (1655)
T PLN02980 1447 VTLVGYSMGARIALYMALR------------FSDKIEGAVIISGSPGLKDEV-ARKIRSAKDDSRARMLIDHGLEIFLEN 1513 (1655)
T ss_pred EEEEEECHHHHHHHHHHHh------------ChHhhCEEEEECCCCccCchH-HHHHHhhhhhHHHHHHHhhhHHHHHHH
Confidence 9999999999999999955 887 99999998754322111 111000000000000000 00000000
Q ss_pred ccccccccccCCccchHHHHHHHHHHhhcCCCcccc-hhhh---hcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHh
Q 020741 208 DLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFD-LRKL---NASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETG 283 (322)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~ 283 (322)
+.. ...+......+.........+.......... +..+ ........+.++++|+|+|+|++|..++ +.+.++.
T Consensus 1514 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~ 1590 (1655)
T PLN02980 1514 WYS--GELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMY 1590 (1655)
T ss_pred hcc--HHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHH
Confidence 000 0000000000111111111111000000000 0010 0111224467899999999999999875 4455555
Q ss_pred hhcC-------------ceeEEecCCcccceeccchhhhHHHHHHHHhhhc
Q 020741 284 SFYG-------------VLPVCVEGVAHDMMLDCSWEKGASVILSWLDGLR 321 (322)
Q Consensus 284 ~~~~-------------~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 321 (322)
+.++ +++++++++||++++|+| +++++.|.+||++..
T Consensus 1591 ~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~P-e~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1591 REIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENP-LPVIRALRKFLTRLH 1640 (1655)
T ss_pred HHccccccccccccccceEEEEECCCCCchHHHCH-HHHHHHHHHHHHhcc
Confidence 5442 379999999999999999 999999999998754
No 46
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.94 E-value=2.8e-26 Score=163.13 Aligned_cols=259 Identities=12% Similarity=0.086 Sum_probs=168.5
Q ss_pred cCCcccCCCceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCC-CcchhhcccchhhHhhh-CCceEEEeC
Q 020741 16 RVPFELKQGQTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGS-YHAAWCWAEHWLPFFAD-SGFDCYAVS 93 (322)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~-~~~~~~~~~~~~~~l~~-~g~~v~~~D 93 (322)
..+......+++..+.+ +|.+|.|..+| .....||++.|. |++...|. +.+..|-+ .-+.++++|
T Consensus 12 ~~~~~~~~~~te~kv~v-ng~ql~y~~~G-----------~G~~~iLlipGalGs~~tDf~-pql~~l~k~l~~TivawD 78 (277)
T KOG2984|consen 12 HLSPMTQSDYTESKVHV-NGTQLGYCKYG-----------HGPNYILLIPGALGSYKTDFP-PQLLSLFKPLQVTIVAWD 78 (277)
T ss_pred cCCccccchhhhheeee-cCceeeeeecC-----------CCCceeEecccccccccccCC-HHHHhcCCCCceEEEEEC
Confidence 33433445566777777 89999999999 344578999997 56666776 44444333 348999999
Q ss_pred CCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEe
Q 020741 94 LLGQGESDAPPGT-VAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLV 170 (322)
Q Consensus 94 ~~G~G~S~~~~~~-~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~ 170 (322)
.||+|.|.++... ...-+..-+++..++++ .+. +++.++|+|-||..++..|++ +++ |.++++.
T Consensus 79 PpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~-aLk~~~fsvlGWSdGgiTalivAak------------~~e~v~rmiiw 145 (277)
T KOG2984|consen 79 PPGYGTSRPPERKFEVQFFMKDAEYAVDLME-ALKLEPFSVLGWSDGGITALIVAAK------------GKEKVNRMIIW 145 (277)
T ss_pred CCCCCCCCCCcccchHHHHHHhHHHHHHHHH-HhCCCCeeEeeecCCCeEEEEeecc------------Chhhhhhheee
Confidence 9999999888761 11234455666777888 788 999999999999999999954 888 9999999
Q ss_pred ccCCCCCCCcchhhhhhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcC
Q 020741 171 CSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNAS 250 (322)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (322)
++........... ....+............. ...+....-+...+.+.....+.....--++
T Consensus 146 ga~ayvn~~~~ma-------~kgiRdv~kWs~r~R~P~-----e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~f------ 207 (277)
T KOG2984|consen 146 GAAAYVNHLGAMA-------FKGIRDVNKWSARGRQPY-----EDHYGPETFRTQWAAWVDVVDQFHSFCDGRF------ 207 (277)
T ss_pred cccceecchhHHH-------HhchHHHhhhhhhhcchH-----HHhcCHHHHHHHHHHHHHHHHHHhhcCCCch------
Confidence 8765433221110 001111111111111100 0011111111122222222221111010011
Q ss_pred CCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcC-ceeEEecCCcccceeccchhhhHHHHHHHHhhh
Q 020741 251 LPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG-VLPVCVEGVAHDMMLDCSWEKGASVILSWLDGL 320 (322)
Q Consensus 251 ~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 320 (322)
-...+++++||+||++|+.|++++....-.+..... +++.++|.++|.+++..+ ++|+..+.+||++.
T Consensus 208 -Cr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLrya-~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 208 -CRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRYA-KEFNKLVLDFLKST 276 (277)
T ss_pred -HhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcceeeech-HHHHHHHHHHHhcc
Confidence 122357899999999999999999888877777765 999999999999999999 99999999999874
No 47
>PRK13604 luxD acyl transferase; Provisional
Probab=99.94 E-value=2.1e-25 Score=174.86 Aligned_cols=227 Identities=12% Similarity=0.049 Sum_probs=142.9
Q ss_pred eeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCC-CCCCCCC
Q 020741 26 TRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQ-GESDAPP 104 (322)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~-G~S~~~~ 104 (322)
..+.+.+.||.+|..+...|. .+...+.++||++||+++....+. .+++.|+++||.|+.+|+||+ |.|++..
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~-----~~~~~~~~~vIi~HGf~~~~~~~~-~~A~~La~~G~~vLrfD~rg~~GeS~G~~ 83 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPK-----ENSPKKNNTILIASGFARRMDHFA-GLAEYLSSNGFHVIRYDSLHHVGLSSGTI 83 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCc-----ccCCCCCCEEEEeCCCCCChHHHH-HHHHHHHHCCCEEEEecCCCCCCCCCCcc
Confidence 345678889999999999975 122345689999999999876665 899999999999999999987 9997755
Q ss_pred CCCCCCHHHHHHHHHHHHHH--hCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCcc
Q 020741 105 GTVAGSLQTHAGDVADFIQK--NLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSGL 181 (322)
Q Consensus 105 ~~~~~~~~~~~~dl~~~l~~--~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~~ 181 (322)
. ..+.....+|+..+++. ..+ .++.|+||||||.+++..|+ .++++.+|+.+|..... ..
T Consensus 84 ~--~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~-------------~~~v~~lI~~sp~~~l~--d~ 146 (307)
T PRK13604 84 D--EFTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVIN-------------EIDLSFLITAVGVVNLR--DT 146 (307)
T ss_pred c--cCcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhc-------------CCCCCEEEEcCCcccHH--HH
Confidence 4 23444446677555542 124 78999999999999977772 23488888888754221 00
Q ss_pred hhhhhhccchhhhHHHHHHhHhhhcccccccccc---ccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCC
Q 020741 182 VWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKET---FFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPK 258 (322)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (322)
... .....+.......... +....+. ...+.......... . ...+.+.+.+
T Consensus 147 l~~---------------~~~~~~~~~p~~~lp~~~d~~g~~l~---~~~f~~~~~~~~~~---~-----~~s~i~~~~~ 200 (307)
T PRK13604 147 LER---------------ALGYDYLSLPIDELPEDLDFEGHNLG---SEVFVTDCFKHGWD---T-----LDSTINKMKG 200 (307)
T ss_pred HHH---------------hhhcccccCccccccccccccccccc---HHHHHHHHHhcCcc---c-----cccHHHHHhh
Confidence 000 0000000000000000 0000000 01111111100000 0 0111122346
Q ss_pred ccccEEEEeeCCCCccChhhHHHHhhhc---CceeEEecCCcccce
Q 020741 259 SSIKVLVLGAKDDFIVDAQGLSETGSFY---GVLPVCVEGVAHDMM 301 (322)
Q Consensus 259 ~~~Pvl~i~g~~D~~~~~~~~~~~~~~~---~~~~~~~~~~gH~~~ 301 (322)
+++|+|+|||++|.++|.+.++.+.+.. ++++++++|++|.+.
T Consensus 201 l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 201 LDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLG 246 (307)
T ss_pred cCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccC
Confidence 7899999999999999999999998866 399999999999864
No 48
>PRK10985 putative hydrolase; Provisional
Probab=99.94 E-value=5.8e-25 Score=180.16 Aligned_cols=274 Identities=15% Similarity=0.136 Sum_probs=151.8
Q ss_pred CceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhh-cccchhhHhhhCCceEEEeCCCCCCCCCC
Q 020741 24 GQTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWC-WAEHWLPFFADSGFDCYAVSLLGQGESDA 102 (322)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~-~~~~~~~~l~~~g~~v~~~D~~G~G~S~~ 102 (322)
......++++||..+.+.....+ .....+|+||++||++++... |...+++.|.++||+|+++|+||||.+..
T Consensus 30 ~~~~~~~~~~dg~~~~l~w~~~~------~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~ 103 (324)
T PRK10985 30 TPYWQRLELPDGDFVDLAWSEDP------AQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPN 103 (324)
T ss_pred CcceeEEECCCCCEEEEecCCCC------ccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCcc
Confidence 44567788999987766433211 122357899999999776433 43367889999999999999999998754
Q ss_pred CCCCCCCC--HHHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCC
Q 020741 103 PPGTVAGS--LQTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNS 179 (322)
Q Consensus 103 ~~~~~~~~--~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~ 179 (322)
.... .+. ..+.+.++.+.+.+.++ .+++++||||||.+++.++++.. ..+.+.++|+++++......
T Consensus 104 ~~~~-~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~---------~~~~~~~~v~i~~p~~~~~~ 173 (324)
T PRK10985 104 RLHR-IYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEG---------DDLPLDAAVIVSAPLMLEAC 173 (324)
T ss_pred CCcc-eECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhC---------CCCCccEEEEEcCCCCHHHH
Confidence 3220 111 11222233344443556 78999999999999888886511 01127888888875321110
Q ss_pred cc-hhhhhhccchhhhHHHHHHhHhhhccccccccccccCCccchHH------HHHHHHHHhhcCCCcccch-hhhhcCC
Q 020741 180 GL-VWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHL------VLRYQELMKESSRMPLFDL-RKLNASL 251 (322)
Q Consensus 180 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-~~~~~~~ 251 (322)
.. ...... ... ...................... ...+.+. +..+........ ...... ..+....
T Consensus 174 ~~~~~~~~~--~~~-~~~l~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~fd~~~~~~~-~g~~~~~~~y~~~~ 246 (324)
T PRK10985 174 SYRMEQGFS--RVY-QRYLLNLLKANAARKLAAYPGT---LPINLAQLKSVRRLREFDDLITARI-HGFADAIDYYRQCS 246 (324)
T ss_pred HHHHhhhHH--HHH-HHHHHHHHHHHHHHHHHhcccc---ccCCHHHHhcCCcHHHHhhhheecc-CCCCCHHHHHHHCC
Confidence 00 000000 000 0000000000000000000000 0011111 122222221111 111111 1111222
Q ss_pred CCCCCCCccccEEEEeeCCCCccChhhHHHHhhhc-CceeEEecCCcccceeccc----hhhhHHHHHHHHhhh
Q 020741 252 PVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFY-GVLPVCVEGVAHDMMLDCS----WEKGASVILSWLDGL 320 (322)
Q Consensus 252 ~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~----~~~~~~~i~~fl~~~ 320 (322)
....+.++++|+++|+|++|++++++....+.+.. +.++++++++||+.+++.. ....-+.+.+|++..
T Consensus 247 ~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~ 320 (324)
T PRK10985 247 ALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTY 320 (324)
T ss_pred hHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHh
Confidence 34556789999999999999999988777665555 4888999999999998752 235567777887653
No 49
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.93 E-value=4e-24 Score=179.23 Aligned_cols=240 Identities=12% Similarity=0.037 Sum_probs=153.7
Q ss_pred CceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcch-hhcccchhhHhhhCCceEEEeCCCCCCCCCC
Q 020741 24 GQTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAA-WCWAEHWLPFFADSGFDCYAVSLLGQGESDA 102 (322)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~ 102 (322)
..+...+...+|.+|..+.+.|. ..++.|+||++||+++.. ..|. .+++.|+++||+|+++|+||+|.|..
T Consensus 167 ~~e~v~i~~~~g~~l~g~l~~P~-------~~~~~P~Vli~gG~~~~~~~~~~-~~~~~La~~Gy~vl~~D~pG~G~s~~ 238 (414)
T PRK05077 167 ELKELEFPIPGGGPITGFLHLPK-------GDGPFPTVLVCGGLDSLQTDYYR-LFRDYLAPRGIAMLTIDMPSVGFSSK 238 (414)
T ss_pred ceEEEEEEcCCCcEEEEEEEECC-------CCCCccEEEEeCCcccchhhhHH-HHHHHHHhCCCEEEEECCCCCCCCCC
Confidence 45677788878888998888754 123567777777766553 4565 67889999999999999999999965
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHh--CC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCC
Q 020741 103 PPGTVAGSLQTHAGDVADFIQKN--LS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGN 178 (322)
Q Consensus 103 ~~~~~~~~~~~~~~dl~~~l~~~--~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~ 178 (322)
... ..+......++.+++... .+ .++.++|||+||.+++.+|.. +|+ ++++|++++......
T Consensus 239 ~~~--~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~------------~p~ri~a~V~~~~~~~~~~ 304 (414)
T PRK05077 239 WKL--TQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYL------------EPPRLKAVACLGPVVHTLL 304 (414)
T ss_pred CCc--cccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHh------------CCcCceEEEEECCccchhh
Confidence 432 234555556777777633 24 789999999999999999944 775 999999987642111
Q ss_pred CcchhhhhhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCC
Q 020741 179 SGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPK 258 (322)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (322)
... ......+. .........+. ....+.+.+.. .+..... .. ... ...+
T Consensus 305 ~~~--~~~~~~p~----~~~~~la~~lg-----------~~~~~~~~l~~---~l~~~sl---~~-~~~-------l~~~ 353 (414)
T PRK05077 305 TDP--KRQQQVPE----MYLDVLASRLG-----------MHDASDEALRV---ELNRYSL---KV-QGL-------LGRR 353 (414)
T ss_pred cch--hhhhhchH----HHHHHHHHHhC-----------CCCCChHHHHH---Hhhhccc---hh-hhh-------hccC
Confidence 000 00000000 00000000000 00011111111 1111000 00 000 0146
Q ss_pred ccccEEEEeeCCCCccChhhHHHHhhhc-CceeEEecCCcccceeccchhhhHHHHHHHHhhh
Q 020741 259 SSIKVLVLGAKDDFIVDAQGLSETGSFY-GVLPVCVEGVAHDMMLDCSWEKGASVILSWLDGL 320 (322)
Q Consensus 259 ~~~Pvl~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 320 (322)
+++|+|+|+|++|.++|.+.++.+.+.. +.++++++++ ++.+.+ +++++.+.+||++.
T Consensus 354 i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~~~e~~-~~~~~~i~~wL~~~ 412 (414)
T PRK05077 354 CPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK---PVYRNF-DKALQEISDWLEDR 412 (414)
T ss_pred CCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---CccCCH-HHHHHHHHHHHHHH
Confidence 8999999999999999999999887766 5899999986 345666 99999999999875
No 50
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.93 E-value=2e-24 Score=172.69 Aligned_cols=250 Identities=13% Similarity=0.093 Sum_probs=145.1
Q ss_pred EEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCc----chhhcccchhhHhhhCCceEEEeCCCCCCCCCCCC
Q 020741 29 SHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYH----AAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPP 104 (322)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~----~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~ 104 (322)
.+.. +|.++....+.|. ...++.||++||++. +...|. .+++.|+++||+|+++|+||||.|....
T Consensus 6 ~~~~-~~~~l~g~~~~p~--------~~~~~~vv~i~gg~~~~~g~~~~~~-~la~~l~~~G~~v~~~Dl~G~G~S~~~~ 75 (274)
T TIGR03100 6 TFSC-EGETLVGVLHIPG--------ASHTTGVLIVVGGPQYRVGSHRQFV-LLARRLAEAGFPVLRFDYRGMGDSEGEN 75 (274)
T ss_pred EEEc-CCcEEEEEEEcCC--------CCCCCeEEEEeCCccccCCchhHHH-HHHHHHHHCCCEEEEeCCCCCCCCCCCC
Confidence 3444 6777877777654 124567888887653 333344 6789999999999999999999987542
Q ss_pred CCCCCCHHHHHHHHHHHHHHh---C-C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCC
Q 020741 105 GTVAGSLQTHAGDVADFIQKN---L-S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNS 179 (322)
Q Consensus 105 ~~~~~~~~~~~~dl~~~l~~~---~-~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~ 179 (322)
.++.++.+|+.++++.. . + ++++++|||+||.+++.++.. .+.|+++|++++.......
T Consensus 76 ----~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~------------~~~v~~lil~~p~~~~~~~ 139 (274)
T TIGR03100 76 ----LGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA------------DLRVAGLVLLNPWVRTEAA 139 (274)
T ss_pred ----CCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh------------CCCccEEEEECCccCCccc
Confidence 46677778887777732 2 4 679999999999999999832 4569999999875322111
Q ss_pred cchhhhhhccchhhhHHHHHHhHhhhccccccccccccCCccc-hHHHHHHHHHHhhc-CCCcccchhhhhcCCCCCCCC
Q 020741 180 GLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSME-DHLVLRYQELMKES-SRMPLFDLRKLNASLPVPSVP 257 (322)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 257 (322)
.. ...... ......... ..+...+ ...++ .+..+.+...+... .......... ........+.
T Consensus 140 ~~-~~~~~~------~~~~~~~~~------~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~ 204 (274)
T TIGR03100 140 QA-ASRIRH------YYLGQLLSA------DFWRKLL-SGEVNLGSSLRGLGDALLKARQKGDEVAHGG-LAERMKAGLE 204 (274)
T ss_pred ch-HHHHHH------HHHHHHhCh------HHHHHhc-CCCccHHHHHHHHHHHHHhhhhcCCCcccch-HHHHHHHHHH
Confidence 10 000000 000000000 0000000 00111 11122222211100 0000000000 0011112234
Q ss_pred CccccEEEEeeCCCCccChhh-----HHHHhhhc---CceeEEecCCcccceeccchhhhHHHHHHHHhh
Q 020741 258 KSSIKVLVLGAKDDFIVDAQG-----LSETGSFY---GVLPVCVEGVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 258 ~~~~Pvl~i~g~~D~~~~~~~-----~~~~~~~~---~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
.+++|+++++|++|...+.-. ...+.+.+ +++++.+++++|++..+..++++.+.|.+||++
T Consensus 205 ~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 205 RFQGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred hcCCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 679999999999998864211 03344433 488999999999987777779999999999963
No 51
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.93 E-value=2.9e-24 Score=166.53 Aligned_cols=238 Identities=18% Similarity=0.183 Sum_probs=155.2
Q ss_pred CCCCCcEEEEcCCCcchhhcccchhhHhhhC-CceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---C-CC
Q 020741 55 NEKRPPLVFVHGSYHAAWCWAEHWLPFFADS-GFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNL---S-LP 129 (322)
Q Consensus 55 ~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~---~-~~ 129 (322)
....|+++++||+.++...|. .+...|+.. +-.|+++|.|.||.|..... .+...+++|+..+|+.+. . .+
T Consensus 49 ~~~~Pp~i~lHGl~GS~~Nw~-sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~---h~~~~ma~dv~~Fi~~v~~~~~~~~ 124 (315)
T KOG2382|consen 49 LERAPPAIILHGLLGSKENWR-SVAKNLSRKLGRDVYAVDVRNHGSSPKITV---HNYEAMAEDVKLFIDGVGGSTRLDP 124 (315)
T ss_pred cCCCCceEEecccccCCCCHH-HHHHHhcccccCceEEEecccCCCCccccc---cCHHHHHHHHHHHHHHcccccccCC
Confidence 358899999999999999997 888988775 77999999999999988876 679999999999999664 3 78
Q ss_pred cEEEEechhH-HHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcc--hhhhh---hccch-----hhhHHH
Q 020741 130 PVLLGHSFGG-LIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGL--VWRYL---FTKPI-----AAFKVT 197 (322)
Q Consensus 130 ~~lvG~S~Gg-~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~--~~~~~---~~~~~-----~~~~~~ 197 (322)
++++|||||| .+++..+ ...|+ +.++|+++-+|....... ..... ...+. ...+..
T Consensus 125 ~~l~GHsmGG~~~~m~~t------------~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~ 192 (315)
T KOG2382|consen 125 VVLLGHSMGGVKVAMAET------------LKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEA 192 (315)
T ss_pred ceecccCcchHHHHHHHH------------HhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHH
Confidence 9999999999 4444444 45888 899999987663111111 00000 00000 001100
Q ss_pred HH-HhHhhhcccc--------c-cccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEe
Q 020741 198 RS-LAAKAFQTDL--------S-LCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLG 267 (322)
Q Consensus 198 ~~-~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~ 267 (322)
.. +....+.... . ......+.-..+...+......+. .......... ...+.|||++.
T Consensus 193 ~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~-----------~~s~~~~l~~-~~~~~pvlfi~ 260 (315)
T KOG2382|consen 193 LKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYE-----------ILSYWADLED-GPYTGPVLFIK 260 (315)
T ss_pred HHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHH-----------hhcccccccc-cccccceeEEe
Confidence 00 0000000000 0 000000001111111111111110 0000111112 46788999999
Q ss_pred eCCCCccChhhHHHHhhhcC-ceeEEecCCcccceeccchhhhHHHHHHHHhhhc
Q 020741 268 AKDDFIVDAQGLSETGSFYG-VLPVCVEGVAHDMMLDCSWEKGASVILSWLDGLR 321 (322)
Q Consensus 268 g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 321 (322)
|.++..++.+....+.+.++ ++++.++++||+++.|+| +++.+.|.+|+.+..
T Consensus 261 g~~S~fv~~~~~~~~~~~fp~~e~~~ld~aGHwVh~E~P-~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 261 GLQSKFVPDEHYPRMEKIFPNVEVHELDEAGHWVHLEKP-EEFIESISEFLEEPE 314 (315)
T ss_pred cCCCCCcChhHHHHHHHhccchheeecccCCceeecCCH-HHHHHHHHHHhcccC
Confidence 99999999998888888875 999999999999999999 999999999998753
No 52
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.92 E-value=1.3e-23 Score=173.90 Aligned_cols=263 Identities=11% Similarity=0.087 Sum_probs=158.8
Q ss_pred CceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchh------------hcccchh---hHhhhCCceEEEeCCCCCCC
Q 020741 35 GLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAW------------CWAEHWL---PFFADSGFDCYAVSLLGQGE 99 (322)
Q Consensus 35 g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~------------~~~~~~~---~~l~~~g~~v~~~D~~G~G~ 99 (322)
..+|.|..+|.. +....++||++|++.+++. .|.+.++ +.|-...|.||++|..|-|.
T Consensus 40 ~~~~~Y~t~G~l-------n~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~ 112 (389)
T PRK06765 40 DVQMGYETYGTL-------NRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQ 112 (389)
T ss_pred CceEEEEecccc-------CCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCc
Confidence 468899999965 2235689999999977542 2222332 23444459999999999775
Q ss_pred CCCC-------C------------CCCCCCHHHHHHHHHHHHHHhCC-CCcE-EEEechhHHHHHHHHHHHhhhhhcccc
Q 020741 100 SDAP-------P------------GTVAGSLQTHAGDVADFIQKNLS-LPPV-LLGHSFGGLIIQYYIARIRNEKMLEME 158 (322)
Q Consensus 100 S~~~-------~------------~~~~~~~~~~~~dl~~~l~~~~~-~~~~-lvG~S~Gg~~a~~~a~~~~~~~~~~~~ 158 (322)
|..+ . ....+++.++++++..+++ .++ .+++ ++||||||++++.+|.+
T Consensus 113 ~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~-~lgi~~~~~vvG~SmGG~ial~~a~~---------- 181 (389)
T PRK06765 113 VKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIK-SLGIARLHAVMGPSMGGMQAQEWAVH---------- 181 (389)
T ss_pred CCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHH-HcCCCCceEEEEECHHHHHHHHHHHH----------
Confidence 3211 1 0224789999999999998 888 8886 99999999999999965
Q ss_pred CCCCC-cceEEEeccCCCCCCCc--chhh-h---hhcc-------------chhhhHHHHHHhHhhhccccccccccccC
Q 020741 159 TPYPE-IAGAVLVCSVPPSGNSG--LVWR-Y---LFTK-------------PIAAFKVTRSLAAKAFQTDLSLCKETFFS 218 (322)
Q Consensus 159 ~~~p~-v~~~vl~~~~~~~~~~~--~~~~-~---~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (322)
+|+ +.++|++++.+...... .... . .... +.............. ..........+..
T Consensus 182 --~P~~v~~lv~ia~~~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~-~~s~~~~~~~f~r 258 (389)
T PRK06765 182 --YPHMVERMIGVIGNPQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMN-AFDEHFYETTFPR 258 (389)
T ss_pred --ChHhhheEEEEecCCCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHH-cCCHHHHHHHcCc
Confidence 998 99999998865433221 0111 0 0000 101111111110000 0000000000000
Q ss_pred ----------CccchHHHHHHHHHHhh-----cCCCcccch-hhhhcC-------CCCCCCCCccccEEEEeeCCCCccC
Q 020741 219 ----------SSMEDHLVLRYQELMKE-----SSRMPLFDL-RKLNAS-------LPVPSVPKSSIKVLVLGAKDDFIVD 275 (322)
Q Consensus 219 ----------~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~-------~~~~~~~~~~~Pvl~i~g~~D~~~~ 275 (322)
........+.|...... .....+..+ ..+... +....+.++++|+|+|+|++|.++|
T Consensus 259 ~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p 338 (389)
T PRK06765 259 NASIEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQP 338 (389)
T ss_pred CccccccccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCC
Confidence 00001112222222111 000000000 111111 1233456899999999999999999
Q ss_pred hhhHHHHhhhc-----CceeEEecC-CcccceeccchhhhHHHHHHHHhh
Q 020741 276 AQGLSETGSFY-----GVLPVCVEG-VAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 276 ~~~~~~~~~~~-----~~~~~~~~~-~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
++..+.+.+.+ +++++++++ +||+.+++++ +++.+.|.+||++
T Consensus 339 ~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p-~~~~~~I~~FL~~ 387 (389)
T PRK06765 339 PRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDI-HLFEKKIYEFLNR 387 (389)
T ss_pred HHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCH-HHHHHHHHHHHcc
Confidence 99888888776 378899985 9999999999 9999999999975
No 53
>PLN02872 triacylglycerol lipase
Probab=99.92 E-value=5.3e-23 Score=170.28 Aligned_cols=278 Identities=17% Similarity=0.218 Sum_probs=166.8
Q ss_pred CceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcc-----cchhhHhhhCCceEEEeCCCCCC
Q 020741 24 GQTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWA-----EHWLPFFADSGFDCYAVSLLGQG 98 (322)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~-----~~~~~~l~~~g~~v~~~D~~G~G 98 (322)
+.+++.++++||..|......+.. +......+|+|+++||++.++..|. ..++..|+++||+|+++|+||++
T Consensus 43 ~~e~h~v~T~DGy~L~l~ri~~~~---~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~ 119 (395)
T PLN02872 43 SCTEHTIQTKDGYLLALQRVSSRN---PRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTR 119 (395)
T ss_pred CceEEEEECCCCcEEEEEEcCCCC---CCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccc
Confidence 457889999999999998875330 0112235789999999998888884 13455688899999999999988
Q ss_pred CCCCCC-------CCCCCCHHHHH-HHHHHHHHHhC---CCCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC----
Q 020741 99 ESDAPP-------GTVAGSLQTHA-GDVADFIQKNL---SLPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE---- 163 (322)
Q Consensus 99 ~S~~~~-------~~~~~~~~~~~-~dl~~~l~~~~---~~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~---- 163 (322)
.|.... ....+++++++ .|+.++++..+ +.+++++|||+||.+++.++. +|+
T Consensus 120 ~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~~-------------~p~~~~~ 186 (395)
T PLN02872 120 WSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAALT-------------QPNVVEM 186 (395)
T ss_pred cccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHhh-------------ChHHHHH
Confidence 663211 12246888888 79999998543 378999999999999985552 343
Q ss_pred cceEEEeccCCCCCCCcc-hh-hhhhcc-----------ch-hhhHHHHHHhHhhhccccccccc---------------
Q 020741 164 IAGAVLVCSVPPSGNSGL-VW-RYLFTK-----------PI-AAFKVTRSLAAKAFQTDLSLCKE--------------- 214 (322)
Q Consensus 164 v~~~vl~~~~~~~~~~~~-~~-~~~~~~-----------~~-~~~~~~~~~~~~~~~~~~~~~~~--------------- 214 (322)
|+.+++++|......... .. ...... .. .............. .....+..
T Consensus 187 v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C-~~~~~c~~~~~~~~g~~~~~n~~ 265 (395)
T PLN02872 187 VEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSIC-EGHMDCNDLLTSITGTNCCFNAS 265 (395)
T ss_pred HHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHc-cCchhHHHHHHHHhCCCcccchh
Confidence 777888887654322111 11 000000 00 00000000000000 00000000
Q ss_pred ---c---ccCCccchHHHHHHHHHHhhcCCCcccchh---hhh---c-CCCCCCCCCc--cccEEEEeeCCCCccChhhH
Q 020741 215 ---T---FFSSSMEDHLVLRYQELMKESSRMPLFDLR---KLN---A-SLPVPSVPKS--SIKVLVLGAKDDFIVDAQGL 279 (322)
Q Consensus 215 ---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~-~~~~~~~~~~--~~Pvl~i~g~~D~~~~~~~~ 279 (322)
. ..+...+-..+..|.+.... .....+++. ... . .-+.-.+.++ ++|+++++|++|.+++++..
T Consensus 266 ~~~~~~~~~pagtS~k~~~H~~Q~~~s-~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv 344 (395)
T PLN02872 266 RIDYYLEYEPHPSSVKNLRHLFQMIRK-GTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDV 344 (395)
T ss_pred hhhHHHhcCCCcchHHHHHHHHHHHhc-CCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHH
Confidence 0 00111122222333333222 222222221 111 1 1123345566 68999999999999999988
Q ss_pred HHHhhhcC--ceeEEecCCcccce---eccchhhhHHHHHHHHhhh
Q 020741 280 SETGSFYG--VLPVCVEGVAHDMM---LDCSWEKGASVILSWLDGL 320 (322)
Q Consensus 280 ~~~~~~~~--~~~~~~~~~gH~~~---~~~~~~~~~~~i~~fl~~~ 320 (322)
+.+.+.++ .+++.+++++|..+ .+.+ +++.+.|.+||++.
T Consensus 345 ~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eap-e~V~~~Il~fL~~~ 389 (395)
T PLN02872 345 EHTLAELPSKPELLYLENYGHIDFLLSTSAK-EDVYNHMIQFFRSL 389 (395)
T ss_pred HHHHHHCCCccEEEEcCCCCCHHHHhCcchH-HHHHHHHHHHHHHh
Confidence 88888774 68888999999633 3666 99999999999864
No 54
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.90 E-value=6.1e-22 Score=164.22 Aligned_cols=245 Identities=14% Similarity=0.161 Sum_probs=138.8
Q ss_pred CCCcEEEEcCCCcchhhcc----cchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHH---HhCC-
Q 020741 57 KRPPLVFVHGSYHAAWCWA----EHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGD-VADFIQ---KNLS- 127 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~----~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~d-l~~~l~---~~~~- 127 (322)
.+++||++||+..+...++ ..+++.|.++||+|+++|++|+|.|... .++++++.+ +.+.++ +..+
T Consensus 61 ~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~-----~~~~d~~~~~~~~~v~~l~~~~~~ 135 (350)
T TIGR01836 61 HKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY-----LTLDDYINGYIDKCVDYICRTSKL 135 (350)
T ss_pred CCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc-----CCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4568999999865554442 2689999999999999999999987532 456666543 433333 3456
Q ss_pred CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcchhhhhhcc-chhh-hH----HHHHH
Q 020741 128 LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVWRYLFTK-PIAA-FK----VTRSL 200 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~~~~~~~-~~~~-~~----~~~~~ 200 (322)
++++++||||||.+++.+++. +|+ ++++|++++................. .... .. .....
T Consensus 136 ~~i~lvGhS~GG~i~~~~~~~------------~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 203 (350)
T TIGR01836 136 DQISLLGICQGGTFSLCYAAL------------YPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGEL 203 (350)
T ss_pred CcccEEEECHHHHHHHHHHHh------------CchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHH
Confidence 899999999999999999854 777 99999998765432221111100000 0000 00 00000
Q ss_pred hHhhhccccc---cccc--cccCCccchHHHHHHHHHHh---hcCCCcccchhh----h-----------hcCCCCCCCC
Q 020741 201 AAKAFQTDLS---LCKE--TFFSSSMEDHLVLRYQELMK---ESSRMPLFDLRK----L-----------NASLPVPSVP 257 (322)
Q Consensus 201 ~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~----~-----------~~~~~~~~~~ 257 (322)
....+..... .... .......+++....+..... .........+.. + .-......+.
T Consensus 204 ~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~ 283 (350)
T TIGR01836 204 LNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLK 283 (350)
T ss_pred HHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHH
Confidence 0000000000 0000 00000001111222211100 000000000000 0 0000122356
Q ss_pred CccccEEEEeeCCCCccChhhHHHHhhhcC---ceeEEecCCcccceeccc--hhhhHHHHHHHHhh
Q 020741 258 KSSIKVLVLGAKDDFIVDAQGLSETGSFYG---VLPVCVEGVAHDMMLDCS--WEKGASVILSWLDG 319 (322)
Q Consensus 258 ~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~gH~~~~~~~--~~~~~~~i~~fl~~ 319 (322)
++++|+++++|++|.+++++.++.+.+.++ .++++++ +||..++..+ .+++.+.|.+||++
T Consensus 284 ~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 284 NIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred hCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 889999999999999999999998888774 5667777 6999877655 48999999999976
No 55
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.89 E-value=2.6e-22 Score=150.35 Aligned_cols=126 Identities=25% Similarity=0.346 Sum_probs=101.8
Q ss_pred EEEeCCCCc-eEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhC-CceEEEeCCCCCCCCCCCCC
Q 020741 28 VSHQLPSGL-NIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADS-GFDCYAVSLLGQGESDAPPG 105 (322)
Q Consensus 28 ~~~~~~~g~-~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~D~~G~G~S~~~~~ 105 (322)
..+..+++. ++..+..++. .+.+|.++++||+|.+...|. .++..|... ..+|+++|+||||.+...+.
T Consensus 51 edv~i~~~~~t~n~Y~t~~~--------~t~gpil~l~HG~G~S~LSfA-~~a~el~s~~~~r~~a~DlRgHGeTk~~~e 121 (343)
T KOG2564|consen 51 EDVSIDGSDLTFNVYLTLPS--------ATEGPILLLLHGGGSSALSFA-IFASELKSKIRCRCLALDLRGHGETKVENE 121 (343)
T ss_pred cccccCCCcceEEEEEecCC--------CCCccEEEEeecCcccchhHH-HHHHHHHhhcceeEEEeeccccCccccCCh
Confidence 344443332 5666666653 358899999999999999997 888888764 46888999999999987766
Q ss_pred CCCCCHHHHHHHHHHHHHHhCC---CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccC
Q 020741 106 TVAGSLQTHAGDVADFIQKNLS---LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSV 173 (322)
Q Consensus 106 ~~~~~~~~~~~dl~~~l~~~~~---~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~ 173 (322)
...+.+.+++|+.+++++.++ .+|+||||||||.++...|.. ..-|.+.++++++-+
T Consensus 122 -~dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~----------k~lpsl~Gl~viDVV 181 (343)
T KOG2564|consen 122 -DDLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAAS----------KTLPSLAGLVVIDVV 181 (343)
T ss_pred -hhcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhh----------hhchhhhceEEEEEe
Confidence 358999999999999997775 679999999999999988865 457779999999854
No 56
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.89 E-value=3.9e-21 Score=163.52 Aligned_cols=252 Identities=12% Similarity=0.112 Sum_probs=148.5
Q ss_pred eEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcc----cchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHH
Q 020741 37 NIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWA----EHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQ 112 (322)
Q Consensus 37 ~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~----~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~ 112 (322)
.+....+.|. .....+++||++||+......|+ ..+++.|.++||+|+++|++|+|.|........|..+
T Consensus 173 ~~eLi~Y~P~------t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~ 246 (532)
T TIGR01838 173 LFQLIQYEPT------TETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRD 246 (532)
T ss_pred cEEEEEeCCC------CCcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHH
Confidence 4455555544 12236789999999988888875 2588999999999999999999988654432234344
Q ss_pred HHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcchhhhhhccc
Q 020741 113 THAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVWRYLFTKP 190 (322)
Q Consensus 113 ~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~~~~~~~~ 190 (322)
.+.+.+..+++ .++ ++++++|||+||.++..+++.+.. ...++ |++++++++............+.....
T Consensus 247 ~i~~al~~v~~-~~g~~kv~lvG~cmGGtl~a~ala~~aa-------~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~ 318 (532)
T TIGR01838 247 GVIAALEVVEA-ITGEKQVNCVGYCIGGTLLSTALAYLAA-------RGDDKRIKSATFFTTLLDFSDPGELGVFVDEEI 318 (532)
T ss_pred HHHHHHHHHHH-hcCCCCeEEEEECcCcHHHHHHHHHHHH-------hCCCCccceEEEEecCcCCCCcchhhhhcCchh
Confidence 45555666555 677 899999999999986332111000 12365 999999998765544333222211111
Q ss_pred hhhhH-HHH-------HHhHhhhcc--------------ccc-----cccc-ccc--CCccchHHHHHHHHHHhhcCCCc
Q 020741 191 IAAFK-VTR-------SLAAKAFQT--------------DLS-----LCKE-TFF--SSSMEDHLVLRYQELMKESSRMP 240 (322)
Q Consensus 191 ~~~~~-~~~-------~~~~~~~~~--------------~~~-----~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~ 240 (322)
..... ... ..+...+.. ... .... .+. ...++......|.+.+.......
T Consensus 319 ~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~ 398 (532)
T TIGR01838 319 VAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALT 398 (532)
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCc
Confidence 10000 000 000000000 000 0000 000 12223333344443333222211
Q ss_pred ccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcC-ceeEEecCCcccceeccc
Q 020741 241 LFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG-VLPVCVEGVAHDMMLDCS 305 (322)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~ 305 (322)
. ..+.-......+.++++|+++|+|++|.++|.+.+..+.+.++ .+..+++++||..++++|
T Consensus 399 ~---G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ienP 461 (532)
T TIGR01838 399 T---GGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVNP 461 (532)
T ss_pred C---CeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhCC
Confidence 0 1111222345677999999999999999999999888888775 777889999999998877
No 57
>PRK10566 esterase; Provisional
Probab=99.89 E-value=2.3e-21 Score=153.77 Aligned_cols=202 Identities=14% Similarity=0.092 Sum_probs=124.4
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCH-------HHHHHHHHHHHHH---h-
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSL-------QTHAGDVADFIQK---N- 125 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~-------~~~~~dl~~~l~~---~- 125 (322)
..|+||++||++++...|. .+++.|+++||+|+++|+||||.+..... .... ....+|+.++++. .
T Consensus 26 ~~p~vv~~HG~~~~~~~~~-~~~~~l~~~G~~v~~~d~~g~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 102 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVYS-YFAVALAQAGFRVIMPDAPMHGARFSGDE--ARRLNHFWQILLQNMQEFPTLRAAIREEG 102 (249)
T ss_pred CCCEEEEeCCCCcccchHH-HHHHHHHhCCCEEEEecCCcccccCCCcc--ccchhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5689999999998888886 78999999999999999999998643221 1111 1223444333331 2
Q ss_pred -CC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCcchhhhhhccchhhhHHHHHHhHh
Q 020741 126 -LS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAK 203 (322)
Q Consensus 126 -~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (322)
.+ ++++++|||+||.+++.++.+ +|++.+.+.+.+.... .. ....
T Consensus 103 ~~~~~~i~v~G~S~Gg~~al~~~~~------------~~~~~~~~~~~~~~~~------~~---------------~~~~ 149 (249)
T PRK10566 103 WLLDDRLAVGGASMGGMTALGIMAR------------HPWVKCVASLMGSGYF------TS---------------LART 149 (249)
T ss_pred CcCccceeEEeecccHHHHHHHHHh------------CCCeeEEEEeeCcHHH------HH---------------HHHH
Confidence 34 789999999999999999854 7876655544331100 00 0000
Q ss_pred hhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCc-cccEEEEeeCCCCccChhhHHHH
Q 020741 204 AFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKS-SIKVLVLGAKDDFIVDAQGLSET 282 (322)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Pvl~i~g~~D~~~~~~~~~~~ 282 (322)
.+... .............+...+. .......+.++ ++|+|+++|++|.+++.+.++.+
T Consensus 150 ~~~~~-------~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l 208 (249)
T PRK10566 150 LFPPL-------IPETAAQQAEFNNIVAPLA--------------EWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRL 208 (249)
T ss_pred hcccc-------cccccccHHHHHHHHHHHh--------------hcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHH
Confidence 00000 0000000011111111110 01111223344 68999999999999999998888
Q ss_pred hhhcC-------ceeEEecCCcccceeccchhhhHHHHHHHHhhh
Q 020741 283 GSFYG-------VLPVCVEGVAHDMMLDCSWEKGASVILSWLDGL 320 (322)
Q Consensus 283 ~~~~~-------~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 320 (322)
.+.++ .+++.++++||.+. .+..+.+.+||++.
T Consensus 209 ~~~l~~~g~~~~~~~~~~~~~~H~~~-----~~~~~~~~~fl~~~ 248 (249)
T PRK10566 209 QQALRERGLDKNLTCLWEPGVRHRIT-----PEALDAGVAFFRQH 248 (249)
T ss_pred HHHHHhcCCCcceEEEecCCCCCccC-----HHHHHHHHHHHHhh
Confidence 77662 46778899999863 35678999999864
No 58
>PRK11071 esterase YqiA; Provisional
Probab=99.89 E-value=2.2e-21 Score=145.79 Aligned_cols=184 Identities=14% Similarity=0.132 Sum_probs=122.8
Q ss_pred CcEEEEcCCCcchhhccc-chhhHhhhC--CceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEE
Q 020741 59 PPLVFVHGSYHAAWCWAE-HWLPFFADS--GFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LPPVLLG 134 (322)
Q Consensus 59 ~~vl~~HG~~~~~~~~~~-~~~~~l~~~--g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG 134 (322)
|+||++||++++...|.. .+.+.|.+. +|+|+++|+||++ ++.++++.++++ .++ ++++++|
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------~~~~~~l~~l~~-~~~~~~~~lvG 67 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------ADAAELLESLVL-EHGGDPLGLVG 67 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------HHHHHHHHHHHH-HcCCCCeEEEE
Confidence 579999999999999862 244566552 6999999999874 367888889998 677 8999999
Q ss_pred echhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCcchhhhhhccchhhhHHHHHHhHhhhccccccccc
Q 020741 135 HSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKE 214 (322)
Q Consensus 135 ~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (322)
||+||.+++.+|.+ +|. ++|++++.... .. ............. ...
T Consensus 68 ~S~Gg~~a~~~a~~------------~~~--~~vl~~~~~~~--~~---------------~~~~~~~~~~~~~---~~~ 113 (190)
T PRK11071 68 SSLGGYYATWLSQC------------FML--PAVVVNPAVRP--FE---------------LLTDYLGENENPY---TGQ 113 (190)
T ss_pred ECHHHHHHHHHHHH------------cCC--CEEEECCCCCH--HH---------------HHHHhcCCccccc---CCC
Confidence 99999999999965 662 46788774320 00 0000000000000 000
Q ss_pred cccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcCceeEEec
Q 020741 215 TFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYGVLPVCVE 294 (322)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~ 294 (322)
. ..++...+.... ... ...+ ...+|+++++|++|+++|.+.+.++.+. ++.++++
T Consensus 114 ~---~~~~~~~~~d~~------------------~~~-~~~i-~~~~~v~iihg~~De~V~~~~a~~~~~~--~~~~~~~ 168 (190)
T PRK11071 114 Q---YVLESRHIYDLK------------------VMQ-IDPL-ESPDLIWLLQQTGDEVLDYRQAVAYYAA--CRQTVEE 168 (190)
T ss_pred c---EEEcHHHHHHHH------------------hcC-CccC-CChhhEEEEEeCCCCcCCHHHHHHHHHh--cceEEEC
Confidence 0 011122222111 001 1112 3778999999999999999999998884 5677889
Q ss_pred CCcccceeccchhhhHHHHHHHHh
Q 020741 295 GVAHDMMLDCSWEKGASVILSWLD 318 (322)
Q Consensus 295 ~~gH~~~~~~~~~~~~~~i~~fl~ 318 (322)
|++|.+ ... +++.+.+.+|++
T Consensus 169 ggdH~f--~~~-~~~~~~i~~fl~ 189 (190)
T PRK11071 169 GGNHAF--VGF-ERYFNQIVDFLG 189 (190)
T ss_pred CCCcch--hhH-HHhHHHHHHHhc
Confidence 999987 343 789999999985
No 59
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.88 E-value=8.8e-21 Score=146.82 Aligned_cols=272 Identities=17% Similarity=0.195 Sum_probs=151.8
Q ss_pred CceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCC-CcchhhcccchhhHhhhCCceEEEeCCCCCCCCCC
Q 020741 24 GQTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGS-YHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDA 102 (322)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~-~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~ 102 (322)
.+.++.+.++||-.+-.....++ .+..+|.||++||+ |++.+.|...+.+.+.++||.|+++++|||+.+..
T Consensus 48 ~~~re~v~~pdg~~~~ldw~~~p-------~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n 120 (345)
T COG0429 48 AYTRERLETPDGGFIDLDWSEDP-------RAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEAN 120 (345)
T ss_pred ccceEEEEcCCCCEEEEeeccCc-------cccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcc
Confidence 44667888888866555544432 23567899999999 44455566678899999999999999999999877
Q ss_pred CCCCCCCCHHHHHHHHHHHHH---HhCC-CCcEEEEechhH-HHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCC
Q 020741 103 PPGTVAGSLQTHAGDVADFIQ---KNLS-LPPVLLGHSFGG-LIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSG 177 (322)
Q Consensus 103 ~~~~~~~~~~~~~~dl~~~l~---~~~~-~~~~lvG~S~Gg-~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~ 177 (322)
... ...-.-..+|+..+++ +..+ .++..+|.|+|| +++..++++ ...+.+.+.+.++.+....
T Consensus 121 ~~p--~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgee----------g~d~~~~aa~~vs~P~Dl~ 188 (345)
T COG0429 121 TSP--RLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEE----------GDDLPLDAAVAVSAPFDLE 188 (345)
T ss_pred cCc--ceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhh----------ccCcccceeeeeeCHHHHH
Confidence 554 1111122255554444 2234 899999999999 555555544 3345555555555422110
Q ss_pred CCcchhhhhhccchhhhHHHHHHhHhhhccccccccccccCCccch---HHHHHHHHHHh--hc---CCCcccch-hhhh
Q 020741 178 NSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMED---HLVLRYQELMK--ES---SRMPLFDL-RKLN 248 (322)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~---~~~~~~~~-~~~~ 248 (322)
... .. ....... .+....+...+..........+ ...... +.++....... .. ....+.+. .-+.
T Consensus 189 ~~~---~~-l~~~~s~-~ly~r~l~~~L~~~~~~kl~~l-~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr 262 (345)
T COG0429 189 ACA---YR-LDSGFSL-RLYSRYLLRNLKRNAARKLKEL-EPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYR 262 (345)
T ss_pred HHH---HH-hcCchhh-hhhHHHHHHHHHHHHHHHHHhc-CcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHH
Confidence 000 00 0000000 0000000000000000000000 111111 11221111111 11 11122222 2233
Q ss_pred cCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhc--CceeEEecCCcccceeccc----hhhhHHHHHHHHhhh
Q 020741 249 ASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFY--GVLPVCVEGVAHDMMLDCS----WEKGASVILSWLDGL 320 (322)
Q Consensus 249 ~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~----~~~~~~~i~~fl~~~ 320 (322)
.......+++|.+|+|+|++.+|++++++......... ++.+..-+.+||..++... .-...+.+.+|++..
T Consensus 263 ~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 263 QASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred hccccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHH
Confidence 45566778899999999999999999998777666533 3888888899999998743 115567788888753
No 60
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.88 E-value=1.1e-20 Score=140.63 Aligned_cols=226 Identities=16% Similarity=0.210 Sum_probs=155.0
Q ss_pred CCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCCCcEEEE
Q 020741 56 EKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQK-NLSLPPVLLG 134 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~-~~~~~~~lvG 134 (322)
..+..++++|-.|+++..|. .|...|... ..++++++||+|.--..+. ..+++++++.+...|.. ..++++.++|
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr-~W~~~lp~~-iel~avqlPGR~~r~~ep~--~~di~~Lad~la~el~~~~~d~P~alfG 80 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFR-SWSRRLPAD-IELLAVQLPGRGDRFGEPL--LTDIESLADELANELLPPLLDAPFALFG 80 (244)
T ss_pred CCCceEEEecCCCCCHHHHH-HHHhhCCch-hheeeecCCCcccccCCcc--cccHHHHHHHHHHHhccccCCCCeeecc
Confidence 36678999999999999997 888888764 9999999999998766555 57999999999988883 4458999999
Q ss_pred echhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCC-cchhhhhhccchhhhHHHHHHhHhhhcccccccc
Q 020741 135 HSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNS-GLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCK 213 (322)
Q Consensus 135 ~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (322)
|||||++|.++|.++++.+ .+ +..+.+.++.+|.... .... ......+...... .-...
T Consensus 81 HSmGa~lAfEvArrl~~~g-------~~-p~~lfisg~~aP~~~~~~~i~------~~~D~~~l~~l~~-lgG~p----- 140 (244)
T COG3208 81 HSMGAMLAFEVARRLERAG-------LP-PRALFISGCRAPHYDRGKQIH------HLDDADFLADLVD-LGGTP----- 140 (244)
T ss_pred cchhHHHHHHHHHHHHHcC-------CC-cceEEEecCCCCCCcccCCcc------CCCHHHHHHHHHH-hCCCC-----
Confidence 9999999999999988764 55 7778777766552111 1100 0000011111100 00000
Q ss_pred ccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcC--ceeE
Q 020741 214 ETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG--VLPV 291 (322)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~~ 291 (322)
..++ -+++.+..+.-.+.. ++..+..+. ...-..++||+.++.|++|..++.+....+.+... .+++
T Consensus 141 ~e~l---ed~El~~l~LPilRA-------D~~~~e~Y~-~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~ 209 (244)
T COG3208 141 PELL---EDPELMALFLPILRA-------DFRALESYR-YPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLR 209 (244)
T ss_pred hHHh---cCHHHHHHHHHHHHH-------HHHHhcccc-cCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEE
Confidence 0000 023333333333222 111111111 11124799999999999999999999999988874 8999
Q ss_pred EecCCcccceeccchhhhHHHHHHHHh
Q 020741 292 CVEGVAHDMMLDCSWEKGASVILSWLD 318 (322)
Q Consensus 292 ~~~~~gH~~~~~~~~~~~~~~i~~fl~ 318 (322)
+++| ||+...++. +++...|.+.+.
T Consensus 210 ~fdG-gHFfl~~~~-~~v~~~i~~~l~ 234 (244)
T COG3208 210 VFDG-GHFFLNQQR-EEVLARLEQHLA 234 (244)
T ss_pred EecC-cceehhhhH-HHHHHHHHHHhh
Confidence 9997 999999988 999999988885
No 61
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.87 E-value=6.2e-20 Score=147.48 Aligned_cols=283 Identities=16% Similarity=0.156 Sum_probs=157.7
Q ss_pred CCCceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCC-CcchhhcccchhhHhhhCCceEEEeCCCCCCCC
Q 020741 22 KQGQTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGS-YHAAWCWAEHWLPFFADSGFDCYAVSLLGQGES 100 (322)
Q Consensus 22 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~-~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S 100 (322)
...+++..++++||-++.+....+++.... .+....|.||++||+ +++...|-..++..+.++||+|++++.||+|.|
T Consensus 90 ~~~y~Reii~~~DGG~~~lDW~~~~~~~~~-~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~ 168 (409)
T KOG1838|consen 90 PVEYTREIIKTSDGGTVTLDWVENPDSRCR-TDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGS 168 (409)
T ss_pred CCcceeEEEEeCCCCEEEEeeccCcccccC-CCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCC
Confidence 567799999999999999877754411100 123467999999998 455556666788888889999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHH---HHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEec-cCCC
Q 020741 101 DAPPGTVAGSLQTHAGDVADFI---QKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVC-SVPP 175 (322)
Q Consensus 101 ~~~~~~~~~~~~~~~~dl~~~l---~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~-~~~~ 175 (322)
.-..+ ..-...+.+|+.+++ .+..+ .++..+|.||||++...|..+.++ ...+.+.+.++ |.-.
T Consensus 169 ~LtTp--r~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~---------~~~l~~a~~v~~Pwd~ 237 (409)
T KOG1838|consen 169 KLTTP--RLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGD---------NTPLIAAVAVCNPWDL 237 (409)
T ss_pred ccCCC--ceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccC---------CCCceeEEEEeccchh
Confidence 87665 111223334444444 43456 889999999999999999977432 33444444444 4321
Q ss_pred CCCCcchhhhhhccchhhhHHHHHHhHhhhccccc--cccccccCCccchHHHHHHHHHHhhcCCCcccch-hhhhcCCC
Q 020741 176 SGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLS--LCKETFFSSSMEDHLVLRYQELMKESSRMPLFDL-RKLNASLP 252 (322)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 252 (322)
............... ....+..-.......... ......+........+.++.+.+..... .+.+. .-+.....
T Consensus 238 ~~~~~~~~~~~~~~~--y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~-gf~~~deYY~~aSs 314 (409)
T KOG1838|consen 238 LAASRSIETPLYRRF--YNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMF-GFKSVDEYYKKASS 314 (409)
T ss_pred hhhhhHHhcccchHH--HHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhc-CCCcHHHHHhhcch
Confidence 100000000000000 000000000001110000 0000011111111233334333332221 11111 12234445
Q ss_pred CCCCCCccccEEEEeeCCCCccChhhHH--HHhhhcCceeEEecCCcccceecc---chhhhHHH-HHHHHhh
Q 020741 253 VPSVPKSSIKVLVLGAKDDFIVDAQGLS--ETGSFYGVLPVCVEGVAHDMMLDC---SWEKGASV-ILSWLDG 319 (322)
Q Consensus 253 ~~~~~~~~~Pvl~i~g~~D~~~~~~~~~--~~~~~~~~~~~~~~~~gH~~~~~~---~~~~~~~~-i~~fl~~ 319 (322)
...+.+|++|+|+|.+.+|+++|++..- ...+..+.-+++-..+||..++|. ......+. +.+|+..
T Consensus 315 ~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~ 387 (409)
T KOG1838|consen 315 SNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGN 387 (409)
T ss_pred hhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHH
Confidence 6677899999999999999999986432 233333466667777899999887 22333333 6677654
No 62
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.86 E-value=4.5e-20 Score=138.18 Aligned_cols=214 Identities=18% Similarity=0.214 Sum_probs=151.0
Q ss_pred CceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhh-CCceEEEeCCCCCCCCCC
Q 020741 24 GQTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFAD-SGFDCYAVSLLGQGESDA 102 (322)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~-~g~~v~~~D~~G~G~S~~ 102 (322)
..+-..+.+..|..+....+.++ ....+++|++||......... .+...|+. -+++++++|++|+|.|.+
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~--------~~~~~~lly~hGNa~Dlgq~~-~~~~~l~~~ln~nv~~~DYSGyG~S~G 104 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPP--------EAAHPTLLYSHGNAADLGQMV-ELFKELSIFLNCNVVSYDYSGYGRSSG 104 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCc--------cccceEEEEcCCcccchHHHH-HHHHHHhhcccceEEEEecccccccCC
Confidence 44455667777877777777765 123589999999855544333 23334443 269999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCC--CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCc
Q 020741 103 PPGTVAGSLQTHAGDVADFIQKNLS--LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSG 180 (322)
Q Consensus 103 ~~~~~~~~~~~~~~dl~~~l~~~~~--~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~ 180 (322)
.+. .....+.++.+-++|++..| ++++|+|+|+|+..++.+|.+ .| +.++|+.+|.....
T Consensus 105 ~ps--E~n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr------------~~-~~alVL~SPf~S~~--- 166 (258)
T KOG1552|consen 105 KPS--ERNLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASR------------YP-LAAVVLHSPFTSGM--- 166 (258)
T ss_pred Ccc--cccchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhc------------CC-cceEEEeccchhhh---
Confidence 887 34555556666777776674 889999999999999999955 77 99999998742110
Q ss_pred chhhhhhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCcc
Q 020741 181 LVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSS 260 (322)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (322)
+........ ..++ + .....+..+.++
T Consensus 167 -----------------rv~~~~~~~-------~~~~-------------------------d-----~f~~i~kI~~i~ 192 (258)
T KOG1552|consen 167 -----------------RVAFPDTKT-------TYCF-------------------------D-----AFPNIEKISKIT 192 (258)
T ss_pred -----------------hhhccCcce-------EEee-------------------------c-----cccccCcceecc
Confidence 000000000 0000 0 000134557899
Q ss_pred ccEEEEeeCCCCccChhhHHHHhhhcC--ceeEEecCCcccceeccchhhhHHHHHHHHhhh
Q 020741 261 IKVLVLGAKDDFIVDAQGLSETGSFYG--VLPVCVEGVAHDMMLDCSWEKGASVILSWLDGL 320 (322)
Q Consensus 261 ~Pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 320 (322)
||+|+++|++|.+++......+.+... .+..++.|+||.-..-.+ ++.+.+..|+...
T Consensus 193 ~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~--~yi~~l~~f~~~~ 252 (258)
T KOG1552|consen 193 CPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELYP--EYIEHLRRFISSV 252 (258)
T ss_pred CCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccccCH--HHHHHHHHHHHHh
Confidence 999999999999999999999999885 588999999998765554 8888898888754
No 63
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.86 E-value=1.4e-20 Score=135.92 Aligned_cols=238 Identities=16% Similarity=0.230 Sum_probs=159.7
Q ss_pred chhhhhccCCcc--cCCCceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHh-hhC
Q 020741 9 LNKAHKMRVPFE--LKQGQTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFF-ADS 85 (322)
Q Consensus 9 ~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l-~~~ 85 (322)
+++-.|...|.+ ..-++++..+.++|.++++.+....+ ++.|+++++||..++..... +.+.-+ ..-
T Consensus 36 ~pqgsR~~vptP~~~n~pye~i~l~T~D~vtL~a~~~~~E---------~S~pTlLyfh~NAGNmGhr~-~i~~~fy~~l 105 (300)
T KOG4391|consen 36 FPQGSRENVPTPKEFNMPYERIELRTRDKVTLDAYLMLSE---------SSRPTLLYFHANAGNMGHRL-PIARVFYVNL 105 (300)
T ss_pred cccccccCCCCccccCCCceEEEEEcCcceeEeeeeeccc---------CCCceEEEEccCCCcccchh-hHHHHHHHHc
Confidence 344455544432 23466888999999999998887755 58999999999988877665 555544 344
Q ss_pred CceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--CC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCC
Q 020741 86 GFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKN--LS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYP 162 (322)
Q Consensus 86 g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~--~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p 162 (322)
+.+|+.+++||+|.|.+.+. ...+...++.+.+++... ++ .++++.|-|+||.+|+.+|++ ..
T Consensus 106 ~mnv~ivsYRGYG~S~Gsps--E~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask------------~~ 171 (300)
T KOG4391|consen 106 KMNVLIVSYRGYGKSEGSPS--EEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASK------------NS 171 (300)
T ss_pred CceEEEEEeeccccCCCCcc--ccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeecc------------ch
Confidence 78999999999999999877 334444455555555433 23 789999999999999999965 44
Q ss_pred C-cceEEEeccCCCCCCCcchhhhhhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcc
Q 020741 163 E-IAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPL 241 (322)
Q Consensus 163 ~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (322)
+ +.++++-+....... .... ..+.- . . .+...+..
T Consensus 172 ~ri~~~ivENTF~SIp~-------------~~i~-------------------~v~p~--~---~-k~i~~lc~------ 207 (300)
T KOG4391|consen 172 DRISAIIVENTFLSIPH-------------MAIP-------------------LVFPF--P---M-KYIPLLCY------ 207 (300)
T ss_pred hheeeeeeechhccchh-------------hhhh-------------------eeccc--h---h-hHHHHHHH------
Confidence 4 777777554321100 0000 00000 0 0 00000000
Q ss_pred cchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcC---ceeEEecCCcccceeccchhhhHHHHHHHHh
Q 020741 242 FDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG---VLPVCVEGVAHDMMLDCSWEKGASVILSWLD 318 (322)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 318 (322)
. +.......+.+-+.|.|++.|.+|.++|+...+.+.+..+ +++..+|++.|.-..-. +-.++.|.+||.
T Consensus 208 ---k--n~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~--dGYfq~i~dFla 280 (300)
T KOG4391|consen 208 ---K--NKWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWIC--DGYFQAIEDFLA 280 (300)
T ss_pred ---H--hhhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEe--ccHHHHHHHHHH
Confidence 0 0000011123567899999999999999999999999885 89999999999866654 478999999998
Q ss_pred hhc
Q 020741 319 GLR 321 (322)
Q Consensus 319 ~~~ 321 (322)
+..
T Consensus 281 E~~ 283 (300)
T KOG4391|consen 281 EVV 283 (300)
T ss_pred Hhc
Confidence 764
No 64
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.86 E-value=5.3e-20 Score=162.45 Aligned_cols=238 Identities=17% Similarity=0.101 Sum_probs=154.2
Q ss_pred CceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhh--cccchhhHhhhCCceEEEeCCCCCCCCC
Q 020741 24 GQTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWC--WAEHWLPFFADSGFDCYAVSLLGQGESD 101 (322)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~--~~~~~~~~l~~~g~~v~~~D~~G~G~S~ 101 (322)
..+..++...||.+++++...|. .....++-|+||++||.+..... |. ...+.|+.+||.|+.+++||.+.-.
T Consensus 364 ~~e~~~~~~~dG~~i~~~l~~P~----~~~~~k~yP~i~~~hGGP~~~~~~~~~-~~~q~~~~~G~~V~~~n~RGS~GyG 438 (620)
T COG1506 364 EPEPVTYKSNDGETIHGWLYKPP----GFDPRKKYPLIVYIHGGPSAQVGYSFN-PEIQVLASAGYAVLAPNYRGSTGYG 438 (620)
T ss_pred CceEEEEEcCCCCEEEEEEecCC----CCCCCCCCCEEEEeCCCCccccccccc-hhhHHHhcCCeEEEEeCCCCCCccH
Confidence 34667788889999999999987 12222234899999999755444 43 5678899999999999999865421
Q ss_pred C-----CC-CCCCCCHHHHHHHHHHHHHHhC--C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEecc
Q 020741 102 A-----PP-GTVAGSLQTHAGDVADFIQKNL--S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCS 172 (322)
Q Consensus 102 ~-----~~-~~~~~~~~~~~~dl~~~l~~~~--~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~ 172 (322)
. .. .......++..+.+. ++.+.- . +++.++|||+||.+++.++. ..|.+++.+...+
T Consensus 439 ~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~------------~~~~f~a~~~~~~ 505 (620)
T COG1506 439 REFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAAT------------KTPRFKAAVAVAG 505 (620)
T ss_pred HHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHh------------cCchhheEEeccC
Confidence 1 11 112245556655555 554221 2 58999999999999999994 4777777766655
Q ss_pred CCCCCCCcchhhhhhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCC
Q 020741 173 VPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLP 252 (322)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (322)
......... .. +......+.. ....... +...+....+
T Consensus 506 ~~~~~~~~~------------------------~~--------------~~~~~~~~~~-~~~~~~~---~~~~~~~~sp 543 (620)
T COG1506 506 GVDWLLYFG------------------------ES--------------TEGLRFDPEE-NGGGPPE---DREKYEDRSP 543 (620)
T ss_pred cchhhhhcc------------------------cc--------------chhhcCCHHH-hCCCccc---ChHHHHhcCh
Confidence 321100000 00 0000000000 0000000 1112222333
Q ss_pred CCCCCCccccEEEEeeCCCCccChhhHHHHhhhcC-----ceeEEecCCcccceeccchhhhHHHHHHHHhhhc
Q 020741 253 VPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG-----VLPVCVEGVAHDMMLDCSWEKGASVILSWLDGLR 321 (322)
Q Consensus 253 ~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 321 (322)
.....++++|+|+|||+.|..|+.+.+..+.+.+. ++++++|+.+|.+........+.+.+.+|++++.
T Consensus 544 ~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 544 IFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRHL 617 (620)
T ss_pred hhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHh
Confidence 44456899999999999999999999888887762 8999999999998875545788999999998764
No 65
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.85 E-value=4.6e-22 Score=156.04 Aligned_cols=213 Identities=21% Similarity=0.253 Sum_probs=123.5
Q ss_pred ceEEEeCCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC
Q 020741 87 FDCYAVSLLGQGESDA--PPGTVAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE 163 (322)
Q Consensus 87 ~~v~~~D~~G~G~S~~--~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~ 163 (322)
|+|+++|+||+|.|+. ......++.+++++++..+++ .++ ++++++||||||.+++.+|++ +|+
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~vG~S~Gg~~~~~~a~~------------~p~ 67 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALRE-ALGIKKINLVGHSMGGMLALEYAAQ------------YPE 67 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHH-HHTTSSEEEEEETHHHHHHHHHHHH------------SGG
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHH-HhCCCCeEEEEECCChHHHHHHHHH------------Cch
Confidence 7899999999999995 133346899999999999999 888 889999999999999999966 888
Q ss_pred -cceEEEeccCC--CCCCC-cchhh-hhhccchhhhHH-HHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcC
Q 020741 164 -IAGAVLVCSVP--PSGNS-GLVWR-YLFTKPIAAFKV-TRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESS 237 (322)
Q Consensus 164 -v~~~vl~~~~~--~~~~~-~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (322)
|+++|++++.. ..... ..... ............ ................ ........................
T Consensus 68 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 146 (230)
T PF00561_consen 68 RVKKLVLISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQF-FAYDREFVEDFLKQFQSQQYARFA 146 (230)
T ss_dssp GEEEEEEESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHTHHHHHHHHHHHHTC
T ss_pred hhcCcEEEeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhhe-eeccCccccchhhccchhhhhHHH
Confidence 99999998853 00000 00000 000000000000 0000000000000000 000000000000000000000000
Q ss_pred C----Ccc--cchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcC-ceeEEecCCcccceeccchhhhH
Q 020741 238 R----MPL--FDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG-VLPVCVEGVAHDMMLDCSWEKGA 310 (322)
Q Consensus 238 ~----~~~--~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~ 310 (322)
. ... ..............+..+++|+++++|++|.++|++....+.+.++ .++++++++||+.+.+.+ +++.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~-~~~~ 225 (230)
T PF00561_consen 147 ETDAFDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGP-DEFN 225 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSH-HHHH
T ss_pred HHHHHhhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCH-Hhhh
Confidence 0 000 0000011111112234699999999999999999999999888875 999999999999999999 8888
Q ss_pred HHHH
Q 020741 311 SVIL 314 (322)
Q Consensus 311 ~~i~ 314 (322)
+.|.
T Consensus 226 ~~i~ 229 (230)
T PF00561_consen 226 EIII 229 (230)
T ss_dssp HHHH
T ss_pred hhhc
Confidence 8775
No 66
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.85 E-value=2e-19 Score=167.49 Aligned_cols=252 Identities=15% Similarity=0.153 Sum_probs=145.5
Q ss_pred CCCCcEEEEcCCCcchhhcccc----hhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--C-CC
Q 020741 56 EKRPPLVFVHGSYHAAWCWAEH----WLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKN--L-SL 128 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~~~----~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~--~-~~ 128 (322)
..+++|||+||++.+...|+.. +++.|.++||+|+++|+ |.++.+......++.+++..+.+.++.. . ++
T Consensus 65 ~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~ 141 (994)
T PRK07868 65 PVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGR 141 (994)
T ss_pred CCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCC
Confidence 4678999999999999999722 37889899999999994 6665543322367778877777777631 2 37
Q ss_pred CcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCC---cchhh------------hhhccchh
Q 020741 129 PPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNS---GLVWR------------YLFTKPIA 192 (322)
Q Consensus 129 ~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~---~~~~~------------~~~~~~~~ 192 (322)
+++++||||||.+++.+++. ..++ |++++++++....... ..... ........
T Consensus 142 ~v~lvG~s~GG~~a~~~aa~-----------~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 210 (994)
T PRK07868 142 DVHLVGYSQGGMFCYQAAAY-----------RRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIP 210 (994)
T ss_pred ceEEEEEChhHHHHHHHHHh-----------cCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCC
Confidence 89999999999999999853 2454 9999998876432111 00000 00000000
Q ss_pred hh--HHHHHHhHhh--hccccccccccccCC-ccchHHHHHHHHHHh--hcCCCcccc-hhhhh---c--------CCCC
Q 020741 193 AF--KVTRSLAAKA--FQTDLSLCKETFFSS-SMEDHLVLRYQELMK--ESSRMPLFD-LRKLN---A--------SLPV 253 (322)
Q Consensus 193 ~~--~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~---~--------~~~~ 253 (322)
.. .......... ............... ..+++....+..... ........+ ...+. . ....
T Consensus 211 ~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~ 290 (994)
T PRK07868 211 GWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQM 290 (994)
T ss_pred HHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEE
Confidence 00 0000000000 000000000000000 011111111111110 000000000 01110 0 0011
Q ss_pred CCCCCccccEEEEeeCCCCccChhhHHHHhhhcC-cee-EEecCCcccceeccc--hhhhHHHHHHHHhhhc
Q 020741 254 PSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG-VLP-VCVEGVAHDMMLDCS--WEKGASVILSWLDGLR 321 (322)
Q Consensus 254 ~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~-~~~~~~gH~~~~~~~--~~~~~~~i~~fl~~~~ 321 (322)
..+.++++|+|+|+|++|.+++++..+.+.+.++ .++ .+++++||+.++-.. +++++..|.+||++.+
T Consensus 291 ~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~ 362 (994)
T PRK07868 291 VTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLE 362 (994)
T ss_pred cchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhc
Confidence 2467999999999999999999999999988875 666 677999999877543 5899999999998764
No 67
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.85 E-value=2.7e-20 Score=135.08 Aligned_cols=141 Identities=23% Similarity=0.319 Sum_probs=109.1
Q ss_pred cEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HHhCC-CCcEEEEech
Q 020741 60 PLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFI-QKNLS-LPPVLLGHSF 137 (322)
Q Consensus 60 ~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l-~~~~~-~~~~lvG~S~ 137 (322)
+||++||++++...|. .+++.|+++||.|+.+|+||+|.+... . .++++.+.+ ....+ .+++++|||+
T Consensus 1 ~vv~~HG~~~~~~~~~-~~~~~l~~~G~~v~~~~~~~~~~~~~~-----~----~~~~~~~~~~~~~~~~~~i~l~G~S~ 70 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQ-PLAEALAEQGYAVVAFDYPGHGDSDGA-----D----AVERVLADIRAGYPDPDRIILIGHSM 70 (145)
T ss_dssp EEEEECTTTTTTHHHH-HHHHHHHHTTEEEEEESCTTSTTSHHS-----H----HHHHHHHHHHHHHCTCCEEEEEEETH
T ss_pred CEEEECCCCCCHHHHH-HHHHHHHHCCCEEEEEecCCCCccchh-----H----HHHHHHHHHHhhcCCCCcEEEEEEcc
Confidence 5899999999999986 899999999999999999999987221 1 233333332 21235 8999999999
Q ss_pred hHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCcchhhhhhccchhhhHHHHHHhHhhhcccccccccccc
Q 020741 138 GGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFF 217 (322)
Q Consensus 138 Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (322)
||.+++.++.+ ++.++++|++++.+
T Consensus 71 Gg~~a~~~~~~------------~~~v~~~v~~~~~~------------------------------------------- 95 (145)
T PF12695_consen 71 GGAIAANLAAR------------NPRVKAVVLLSPYP------------------------------------------- 95 (145)
T ss_dssp HHHHHHHHHHH------------STTESEEEEESESS-------------------------------------------
T ss_pred CcHHHHHHhhh------------ccceeEEEEecCcc-------------------------------------------
Confidence 99999999966 57799999998610
Q ss_pred CCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcC--ceeEEecC
Q 020741 218 SSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG--VLPVCVEG 295 (322)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~ 295 (322)
..+ .+...++|+++++|++|..++.+..+.+.+.++ .++++++|
T Consensus 96 ----~~~------------------------------~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g 141 (145)
T PF12695_consen 96 ----DSE------------------------------DLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPG 141 (145)
T ss_dssp ----GCH------------------------------HHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETT
T ss_pred ----chh------------------------------hhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCC
Confidence 000 012456699999999999999999999888774 89999999
Q ss_pred Cccc
Q 020741 296 VAHD 299 (322)
Q Consensus 296 ~gH~ 299 (322)
++|+
T Consensus 142 ~~H~ 145 (145)
T PF12695_consen 142 AGHF 145 (145)
T ss_dssp S-TT
T ss_pred CcCc
Confidence 9995
No 68
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.83 E-value=1.7e-18 Score=138.77 Aligned_cols=255 Identities=24% Similarity=0.334 Sum_probs=144.1
Q ss_pred CCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhC--CceEEEeCCCCCCCCCCCCCCCCCCH
Q 020741 34 SGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADS--GFDCYAVSLLGQGESDAPPGTVAGSL 111 (322)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~--g~~v~~~D~~G~G~S~~~~~~~~~~~ 111 (322)
.+..+.|...+. ..++|+++||++++...|. .....+... .|+++.+|+||||.|. .. .+..
T Consensus 8 ~~~~~~~~~~~~-----------~~~~i~~~hg~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~---~~~~ 71 (282)
T COG0596 8 DGVRLAYREAGG-----------GGPPLVLLHGFPGSSSVWR-PVFKVLPALAARYRVIAPDLRGHGRSD-PA---GYSL 71 (282)
T ss_pred CCeEEEEeecCC-----------CCCeEEEeCCCCCchhhhH-HHHHHhhccccceEEEEecccCCCCCC-cc---cccH
Confidence 445666666652 1459999999999998887 422333321 1899999999999997 11 2455
Q ss_pred HHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcchhh-hhhc
Q 020741 112 QTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVWR-YLFT 188 (322)
Q Consensus 112 ~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~~-~~~~ 188 (322)
...++++..+++ .++ .+++++|||+||.+++.++.+ +|+ +.+++++++............ ....
T Consensus 72 ~~~~~~~~~~~~-~~~~~~~~l~G~S~Gg~~~~~~~~~------------~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 138 (282)
T COG0596 72 SAYADDLAALLD-ALGLEKVVLVGHSMGGAVALALALR------------HPDRVRGLVLIGPAPPPGLLEAALRQPAGA 138 (282)
T ss_pred HHHHHHHHHHHH-HhCCCceEEEEecccHHHHHHHHHh------------cchhhheeeEecCCCCcccccCccccCccc
Confidence 555899999999 777 789999999999999999955 887 999999997643111000000 0000
Q ss_pred cchhhhHH------HHHHhHhhhccc-ccccccc---ccCCccchHHHHHHHHHHhhcCCCcccc-hhhhhcCCCCCCCC
Q 020741 189 KPIAAFKV------TRSLAAKAFQTD-LSLCKET---FFSSSMEDHLVLRYQELMKESSRMPLFD-LRKLNASLPVPSVP 257 (322)
Q Consensus 189 ~~~~~~~~------~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 257 (322)
........ ............ ....... ............................ ..............
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (282)
T COG0596 139 APLAALADLLLGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALA 218 (282)
T ss_pred cchhhhhhhhhccchhhhhhhhhcccccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhc
Confidence 00000000 000000000000 0000000 0000000001111111000000000000 00001102234456
Q ss_pred CccccEEEEeeCCCCccChhhHHHHhhhcC--ceeEEecCCcccceeccchhhhHHHHHHHHh
Q 020741 258 KSSIKVLVLGAKDDFIVDAQGLSETGSFYG--VLPVCVEGVAHDMMLDCSWEKGASVILSWLD 318 (322)
Q Consensus 258 ~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 318 (322)
.+++|+++++|++|.+.+......+.+..+ .++++++++||+.+.++| +.+.+.+.+|++
T Consensus 219 ~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p-~~~~~~i~~~~~ 280 (282)
T COG0596 219 RITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAP-EAFAAALLAFLE 280 (282)
T ss_pred cCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcH-HHHHHHHHHHHh
Confidence 788999999999997766655555555553 699999999999999999 888888888554
No 69
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.82 E-value=7e-18 Score=128.18 Aligned_cols=107 Identities=19% Similarity=0.180 Sum_probs=93.4
Q ss_pred CCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--CCcEEE
Q 020741 56 EKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS--LPPVLL 133 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~--~~~~lv 133 (322)
+...+||-+||.+++..+|. .+.+.|.+.|.|+|.+++||+|.+..... ..++-.+...-+.++|+ .++ ++++.+
T Consensus 33 s~~gTVv~~hGsPGSH~DFk-Yi~~~l~~~~iR~I~iN~PGf~~t~~~~~-~~~~n~er~~~~~~ll~-~l~i~~~~i~~ 109 (297)
T PF06342_consen 33 SPLGTVVAFHGSPGSHNDFK-YIRPPLDEAGIRFIGINYPGFGFTPGYPD-QQYTNEERQNFVNALLD-ELGIKGKLIFL 109 (297)
T ss_pred CCceeEEEecCCCCCccchh-hhhhHHHHcCeEEEEeCCCCCCCCCCCcc-cccChHHHHHHHHHHHH-HcCCCCceEEE
Confidence 34558999999999999997 89999999999999999999999998776 46889999999999999 776 788999
Q ss_pred EechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCC
Q 020741 134 GHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGN 178 (322)
Q Consensus 134 G~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~ 178 (322)
|||.||-.|+.++.. +| ..++++++|......
T Consensus 110 gHSrGcenal~la~~------------~~-~~g~~lin~~G~r~H 141 (297)
T PF06342_consen 110 GHSRGCENALQLAVT------------HP-LHGLVLINPPGLRPH 141 (297)
T ss_pred EeccchHHHHHHHhc------------Cc-cceEEEecCCccccc
Confidence 999999999999954 65 679999998764433
No 70
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.82 E-value=5.4e-19 Score=127.60 Aligned_cols=216 Identities=18% Similarity=0.211 Sum_probs=134.4
Q ss_pred CCCcEEEEcCCCcchh-hcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCc--EE
Q 020741 57 KRPPLVFVHGSYHAAW-CWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LPP--VL 132 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~--~l 132 (322)
+...+|++||+-++.. .+...++..|.+.|+.++.+|++|.|.|...-.. ......++|+..+++..-+ ..+ ++
T Consensus 32 s~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~--Gn~~~eadDL~sV~q~~s~~nr~v~vi 109 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYY--GNYNTEADDLHSVIQYFSNSNRVVPVI 109 (269)
T ss_pred CceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcccc--CcccchHHHHHHHHHHhccCceEEEEE
Confidence 7789999999965543 2334678899999999999999999999987763 3445556999999993334 443 58
Q ss_pred EEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCcchhhhhhccchhhhHHHHHHhHhhhcccccc-
Q 020741 133 LGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSL- 211 (322)
Q Consensus 133 vG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 211 (322)
+|||-||.+++.+|.+ ++++.-+|-+++....... .. .+................
T Consensus 110 ~gHSkGg~Vvl~ya~K------------~~d~~~viNcsGRydl~~~-I~-----------eRlg~~~l~~ike~Gfid~ 165 (269)
T KOG4667|consen 110 LGHSKGGDVVLLYASK------------YHDIRNVINCSGRYDLKNG-IN-----------ERLGEDYLERIKEQGFIDV 165 (269)
T ss_pred EeecCccHHHHHHHHh------------hcCchheEEcccccchhcc-hh-----------hhhcccHHHHHHhCCceec
Confidence 9999999999999965 6666666666542211100 00 000000001100000000
Q ss_pred -ccccccCCccchHHHHHHHH-HHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhc-Cc
Q 020741 212 -CKETFFSSSMEDHLVLRYQE-LMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFY-GV 288 (322)
Q Consensus 212 -~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~-~~ 288 (322)
.+..-+...+.++.+..... .+..... --..+||||-+||..|.++|.+.+.++++.+ +.
T Consensus 166 ~~rkG~y~~rvt~eSlmdrLntd~h~acl-----------------kId~~C~VLTvhGs~D~IVPve~AkefAk~i~nH 228 (269)
T KOG4667|consen 166 GPRKGKYGYRVTEESLMDRLNTDIHEACL-----------------KIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNH 228 (269)
T ss_pred CcccCCcCceecHHHHHHHHhchhhhhhc-----------------CcCccCceEEEeccCCceeechhHHHHHHhccCC
Confidence 00111122223332222111 1100000 0146899999999999999999999999988 49
Q ss_pred eeEEecCCcccceeccchhhhHHHHHHHH
Q 020741 289 LPVCVEGVAHDMMLDCSWEKGASVILSWL 317 (322)
Q Consensus 289 ~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 317 (322)
++.++||+.|.....+. +.......|.
T Consensus 229 ~L~iIEgADHnyt~~q~--~l~~lgl~f~ 255 (269)
T KOG4667|consen 229 KLEIIEGADHNYTGHQS--QLVSLGLEFI 255 (269)
T ss_pred ceEEecCCCcCccchhh--hHhhhcceeE
Confidence 99999999998766543 4444444443
No 71
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.81 E-value=1.3e-18 Score=136.32 Aligned_cols=123 Identities=20% Similarity=0.185 Sum_probs=91.9
Q ss_pred EEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcch----hhcccchhhHhhhCCceEEEeCCCCCCCCCCC
Q 020741 28 VSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAA----WCWAEHWLPFFADSGFDCYAVSLLGQGESDAP 103 (322)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~----~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~ 103 (322)
.+++.+.|. +....+.|. ..+..++|||+||+++.. ..|. .+++.|+++||+|+++|+||||.|...
T Consensus 3 ~~l~~~~g~-~~~~~~~p~-------~~~~~~~VlllHG~g~~~~~~~~~~~-~la~~La~~Gy~Vl~~Dl~G~G~S~g~ 73 (266)
T TIGR03101 3 FFLDAPHGF-RFCLYHPPV-------AVGPRGVVIYLPPFAEEMNKSRRMVA-LQARAFAAGGFGVLQIDLYGCGDSAGD 73 (266)
T ss_pred EEecCCCCc-EEEEEecCC-------CCCCceEEEEECCCcccccchhHHHH-HHHHHHHHCCCEEEEECCCCCCCCCCc
Confidence 356666664 445555543 112357899999997643 3454 568899989999999999999999765
Q ss_pred CCCCCCCHHHHHHHHHHHHHH--hCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccC
Q 020741 104 PGTVAGSLQTHAGDVADFIQK--NLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSV 173 (322)
Q Consensus 104 ~~~~~~~~~~~~~dl~~~l~~--~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~ 173 (322)
.. ..++..+++|+..+++. ..+ .+++|+||||||.+++.++.+ +|+ +.++|+++|.
T Consensus 74 ~~--~~~~~~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~------------~p~~v~~lVL~~P~ 133 (266)
T TIGR03101 74 FA--AARWDVWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANP------------LAAKCNRLVLWQPV 133 (266)
T ss_pred cc--cCCHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHh------------CccccceEEEeccc
Confidence 44 35788888887765441 245 789999999999999999954 776 8899999875
No 72
>PRK11460 putative hydrolase; Provisional
Probab=99.79 E-value=1e-17 Score=130.28 Aligned_cols=170 Identities=15% Similarity=0.147 Sum_probs=109.9
Q ss_pred CCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCC---------CCCC---CHHHHHHHHHHHHH
Q 020741 56 EKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPG---------TVAG---SLQTHAGDVADFIQ 123 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~---------~~~~---~~~~~~~dl~~~l~ 123 (322)
+..++||++||++++...|. .+++.|...++.+..++.+|...+..... .... .+.+..+.+.++++
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~-~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMG-EIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCcEEEEEeCCCCChHHHH-HHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 46789999999999999997 88999987766666666666533211100 0001 12233333434333
Q ss_pred H---hC--C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcchhhhhhccchhhhHH
Q 020741 124 K---NL--S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKV 196 (322)
Q Consensus 124 ~---~~--~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (322)
. .. . ++++++|||+||.+++.++.+ +|+ +.+++.+++....
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~------------~~~~~~~vv~~sg~~~~-------------------- 140 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKA------------EPGLAGRVIAFSGRYAS-------------------- 140 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHh------------CCCcceEEEEecccccc--------------------
Confidence 2 22 2 679999999999999999854 777 4445554431000
Q ss_pred HHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccCh
Q 020741 197 TRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDA 276 (322)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~ 276 (322)
... ....++|+++++|++|.++|.
T Consensus 141 ------------------------~~~--------------------------------~~~~~~pvli~hG~~D~vvp~ 164 (232)
T PRK11460 141 ------------------------LPE--------------------------------TAPTATTIHLIHGGEDPVIDV 164 (232)
T ss_pred ------------------------ccc--------------------------------cccCCCcEEEEecCCCCccCH
Confidence 000 012367999999999999999
Q ss_pred hhHHHHhhhcC-----ceeEEecCCcccceeccchhhhHHHHHHHHhh
Q 020741 277 QGLSETGSFYG-----VLPVCVEGVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 277 ~~~~~~~~~~~-----~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
+.++++.+.+. +++++++++||.+.. +..+.+.+||.+
T Consensus 165 ~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~-----~~~~~~~~~l~~ 207 (232)
T PRK11460 165 AHAVAAQEALISLGGDVTLDIVEDLGHAIDP-----RLMQFALDRLRY 207 (232)
T ss_pred HHHHHHHHHHHHCCCCeEEEEECCCCCCCCH-----HHHHHHHHHHHH
Confidence 98888777652 688889999999853 344455555543
No 73
>PLN02442 S-formylglutathione hydrolase
Probab=99.78 E-value=1.7e-17 Score=132.97 Aligned_cols=204 Identities=15% Similarity=0.107 Sum_probs=120.1
Q ss_pred CCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhccc--chhhHhhhCCceEEEeCCCCCCC-----CCC----
Q 020741 34 SGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAE--HWLPFFADSGFDCYAVSLLGQGE-----SDA---- 102 (322)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~--~~~~~l~~~g~~v~~~D~~G~G~-----S~~---- 102 (322)
-|..+.|..+-|+ .......|+|+|+||++++...|.. .+...+...|+.|+.+|..++|. +..
T Consensus 28 l~~~~~~~vy~P~-----~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~ 102 (283)
T PLN02442 28 LGCSMTFSVYFPP-----ASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFG 102 (283)
T ss_pred cCCceEEEEEcCC-----cccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccC
Confidence 5678999888865 1223467999999999888777641 23456677799999999887661 110
Q ss_pred -CC-----CC-C---CCC-HHHHHHHHHHHHHH---hCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cce
Q 020741 103 -PP-----GT-V---AGS-LQTHAGDVADFIQK---NLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAG 166 (322)
Q Consensus 103 -~~-----~~-~---~~~-~~~~~~dl~~~l~~---~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~ 166 (322)
.. .. . ... .....+++..+++. .++ ++++++||||||..++.++.+ +|+ +++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~------------~p~~~~~ 170 (283)
T PLN02442 103 VGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLK------------NPDKYKS 170 (283)
T ss_pred CCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHh------------CchhEEE
Confidence 00 00 0 001 12233444444443 245 789999999999999999954 888 888
Q ss_pred EEEeccCCCCCCCcchhhhhhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhh
Q 020741 167 AVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRK 246 (322)
Q Consensus 167 ~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (322)
++.+++.......... .......+ .. +.+....+
T Consensus 171 ~~~~~~~~~~~~~~~~---------------~~~~~~~~------------g~--~~~~~~~~----------------- 204 (283)
T PLN02442 171 VSAFAPIANPINCPWG---------------QKAFTNYL------------GS--DKADWEEY----------------- 204 (283)
T ss_pred EEEECCccCcccCchh---------------hHHHHHHc------------CC--ChhhHHHc-----------------
Confidence 8888875321110000 00000000 00 01111110
Q ss_pred hhcCCCCCCCCCccccEEEEeeCCCCccChh-hHHHHhhhc-----CceeEEecCCcccce
Q 020741 247 LNASLPVPSVPKSSIKVLVLGAKDDFIVDAQ-GLSETGSFY-----GVLPVCVEGVAHDMM 301 (322)
Q Consensus 247 ~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~-~~~~~~~~~-----~~~~~~~~~~gH~~~ 301 (322)
........+...++|+++++|++|.+++.. ..+.+.+.+ +.++++++|.+|..+
T Consensus 205 -d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 205 -DATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred -ChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 011111122356889999999999998863 234443332 388999999999765
No 74
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.77 E-value=2.7e-17 Score=129.87 Aligned_cols=264 Identities=16% Similarity=0.220 Sum_probs=160.3
Q ss_pred CCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhh----------cccchh---hHhhhCCceEEEeCCCCCC-C
Q 020741 34 SGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWC----------WAEHWL---PFFADSGFDCYAVSLLGQG-E 99 (322)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~----------~~~~~~---~~l~~~g~~v~~~D~~G~G-~ 99 (322)
++..|.|..+|.. +.....+||++|++.++... |.+.++ +.+....|-||+.|-.|.+ .
T Consensus 34 ~~~~vay~T~Gtl-------n~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~G 106 (368)
T COG2021 34 SDARVAYETYGTL-------NAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKG 106 (368)
T ss_pred cCcEEEEEecccc-------cccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCC
Confidence 4579999999966 12346789999999775443 322221 1233334999999999876 5
Q ss_pred CCCCCC-----------CCCCCHHHHHHHHHHHHHHhCC-CCcE-EEEechhHHHHHHHHHHHhhhhhccccCCCCC-cc
Q 020741 100 SDAPPG-----------TVAGSLQTHAGDVADFIQKNLS-LPPV-LLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IA 165 (322)
Q Consensus 100 S~~~~~-----------~~~~~~~~~~~dl~~~l~~~~~-~~~~-lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~ 165 (322)
|+.+.. ...+++.++++.-..+++ .++ +++. +||.||||+.++.++.. +|+ |.
T Consensus 107 StgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~-~LGI~~l~avvGgSmGGMqaleWa~~------------yPd~V~ 173 (368)
T COG2021 107 STGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLD-ALGIKKLAAVVGGSMGGMQALEWAIR------------YPDRVR 173 (368)
T ss_pred CCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHH-hcCcceEeeeeccChHHHHHHHHHHh------------ChHHHh
Confidence 555443 134678888888878888 899 8886 99999999999999954 999 99
Q ss_pred eEEEeccCCCCCCCcchhhhhhc------------------cchhhhHHHHHHhHhhhccccccccccccC----Cc---
Q 020741 166 GAVLVCSVPPSGNSGLVWRYLFT------------------KPIAAFKVTRSLAAKAFQTDLSLCKETFFS----SS--- 220 (322)
Q Consensus 166 ~~vl~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--- 220 (322)
+++.+++.+........++...+ .+...+...+....-..... ......|-. ..
T Consensus 174 ~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~-~~~~~rF~r~~~~~~~~~ 252 (368)
T COG2021 174 RAIPIATAARLSAQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSE-EELDERFGRRLQADPLRG 252 (368)
T ss_pred hhheecccccCCHHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCH-HHHHHHhcccccccccCC
Confidence 99999886544332221111111 11122222221111100000 000000000 00
Q ss_pred -cchHHHHHHHHHHhhc-----CCCc-ccchhhhhcCCCCCC-------CCCccccEEEEeeCCCCccChhhHHHHhhhc
Q 020741 221 -MEDHLVLRYQELMKES-----SRMP-LFDLRKLNASLPVPS-------VPKSSIKVLVLGAKDDFIVDAQGLSETGSFY 286 (322)
Q Consensus 221 -~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~~-------~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~ 286 (322)
-....++.|....... .... +.-...+...+.... +.++++|+|++.-+.|...|++..+++.+.+
T Consensus 253 ~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L 332 (368)
T COG2021 253 GGVRFAVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEAL 332 (368)
T ss_pred CchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhc
Confidence 1122333333322211 1111 111122333333222 6789999999999999999999999999988
Q ss_pred C-ce-eEEec-CCcccceeccchhhhHHHHHHHHhh
Q 020741 287 G-VL-PVCVE-GVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 287 ~-~~-~~~~~-~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
. .. +++++ ..||..++... +.+...|.+||+.
T Consensus 333 ~~~~~~~~i~S~~GHDaFL~e~-~~~~~~i~~fL~~ 367 (368)
T COG2021 333 PAAGALREIDSPYGHDAFLVES-EAVGPLIRKFLAL 367 (368)
T ss_pred cccCceEEecCCCCchhhhcch-hhhhHHHHHHhhc
Confidence 5 33 66664 57999998887 8888999999975
No 75
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.76 E-value=8.7e-17 Score=128.78 Aligned_cols=124 Identities=13% Similarity=0.126 Sum_probs=85.9
Q ss_pred CCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhccc-chhhHh-hhCCceEEEeCC--CCCCCCCCCC-----
Q 020741 34 SGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAE-HWLPFF-ADSGFDCYAVSL--LGQGESDAPP----- 104 (322)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~-~~~~~l-~~~g~~v~~~D~--~G~G~S~~~~----- 104 (322)
-+..+.|..+.|+. ....+.|+|+++||++++...|.. .....+ .+.|+.|+++|. +|+|.+....
T Consensus 23 ~~~~~~~~v~~P~~-----~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g 97 (275)
T TIGR02821 23 CGVPMTFGVFLPPQ-----AAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFG 97 (275)
T ss_pred cCCceEEEEEcCCC-----ccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCccccccc
Confidence 57788899998751 112357999999999988887741 112344 456899999998 5555432110
Q ss_pred -------------CCCCCCHHH-HHHHHHHHHHHhC--C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cce
Q 020741 105 -------------GTVAGSLQT-HAGDVADFIQKNL--S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAG 166 (322)
Q Consensus 105 -------------~~~~~~~~~-~~~dl~~~l~~~~--~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~ 166 (322)
....+...+ .++++..++++.+ + ++++++||||||.+++.++.+ +|+ +.+
T Consensus 98 ~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~------------~p~~~~~ 165 (275)
T TIGR02821 98 KGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALK------------NPDRFKS 165 (275)
T ss_pred CCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHh------------CcccceE
Confidence 000123333 4678888888543 4 689999999999999999954 888 888
Q ss_pred EEEeccCC
Q 020741 167 AVLVCSVP 174 (322)
Q Consensus 167 ~vl~~~~~ 174 (322)
++++++..
T Consensus 166 ~~~~~~~~ 173 (275)
T TIGR02821 166 VSAFAPIV 173 (275)
T ss_pred EEEECCcc
Confidence 88888753
No 76
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.75 E-value=2.2e-16 Score=128.20 Aligned_cols=240 Identities=15% Similarity=0.119 Sum_probs=135.2
Q ss_pred CCceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCC
Q 020741 23 QGQTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDA 102 (322)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~ 102 (322)
...++..|... |.+|......|+ +.+..|+||++.|+.+....+...+.+.|..+|+.++++|.||.|.|..
T Consensus 163 ~~i~~v~iP~e-g~~I~g~LhlP~-------~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~ 234 (411)
T PF06500_consen 163 YPIEEVEIPFE-GKTIPGYLHLPS-------GEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPK 234 (411)
T ss_dssp SEEEEEEEEET-TCEEEEEEEESS-------SSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTT
T ss_pred CCcEEEEEeeC-CcEEEEEEEcCC-------CCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCccccc
Confidence 34577778884 578888877765 3456688888888877776655345577889999999999999999865
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhC--C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCC
Q 020741 103 PPGTVAGSLQTHAGDVADFIQKNL--S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNS 179 (322)
Q Consensus 103 ~~~~~~~~~~~~~~dl~~~l~~~~--~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~ 179 (322)
... ..+.+.+.+.+.++|...- + .+|.++|.|+||.+|.++|.- ..++++++|.++++......
T Consensus 235 ~~l--~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~l-----------e~~RlkavV~~Ga~vh~~ft 301 (411)
T PF06500_consen 235 WPL--TQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAAL-----------EDPRLKAVVALGAPVHHFFT 301 (411)
T ss_dssp T-S---S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHH-----------TTTT-SEEEEES---SCGGH
T ss_pred CCC--CcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHh-----------cccceeeEeeeCchHhhhhc
Confidence 433 2344567777888887322 2 689999999999999999843 23459999999886432111
Q ss_pred cchhhhhhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCC--C
Q 020741 180 GLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSV--P 257 (322)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 257 (322)
.. ......+.. ....+...+.. ...+.+. +...+...+- .....+ .
T Consensus 302 ~~--~~~~~~P~m----y~d~LA~rlG~-----------~~~~~~~---l~~el~~~SL------------k~qGlL~~r 349 (411)
T PF06500_consen 302 DP--EWQQRVPDM----YLDVLASRLGM-----------AAVSDES---LRGELNKFSL------------KTQGLLSGR 349 (411)
T ss_dssp -H--HHHTTS-HH----HHHHHHHHCT------------SCE-HHH---HHHHGGGGST------------TTTTTTTSS
T ss_pred cH--HHHhcCCHH----HHHHHHHHhCC-----------ccCCHHH---HHHHHHhcCc------------chhccccCC
Confidence 10 000111110 11111111110 0011111 1111111100 001112 5
Q ss_pred CccccEEEEeeCCCCccChhhHHHHhhhc-CceeEEecCCc-ccceeccchhhhHHHHHHHHhhh
Q 020741 258 KSSIKVLVLGAKDDFIVDAQGLSETGSFY-GVLPVCVEGVA-HDMMLDCSWEKGASVILSWLDGL 320 (322)
Q Consensus 258 ~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~g-H~~~~~~~~~~~~~~i~~fl~~~ 320 (322)
+..+|+|.+.|++|+++|.+..+.++..- +.+...++... |..+ +.....+.+||++.
T Consensus 350 r~~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~~~~~~~~~gy-----~~al~~~~~Wl~~~ 409 (411)
T PF06500_consen 350 RCPTPLLAINGEDDPVSPIEDSRLIAESSTDGKALRIPSKPLHMGY-----PQALDEIYKWLEDK 409 (411)
T ss_dssp -BSS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEEE-SSSHHHHH-----HHHHHHHHHHHHHH
T ss_pred CCCcceEEeecCCCCCCCHHHHHHHHhcCCCCceeecCCCccccch-----HHHHHHHHHHHHHh
Confidence 78899999999999999999998887765 47777777544 4332 56688899999864
No 77
>PLN00021 chlorophyllase
Probab=99.74 E-value=1.5e-16 Score=128.20 Aligned_cols=122 Identities=16% Similarity=0.099 Sum_probs=79.4
Q ss_pred ceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHH
Q 020741 36 LNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHA 115 (322)
Q Consensus 36 ~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~ 115 (322)
..+.+..+.|. .....|+|||+||++.+...|. .+++.|+++||.|+++|++|++.+..... ..+..+..
T Consensus 37 ~~~p~~v~~P~-------~~g~~PvVv~lHG~~~~~~~y~-~l~~~Las~G~~VvapD~~g~~~~~~~~~--i~d~~~~~ 106 (313)
T PLN00021 37 PPKPLLVATPS-------EAGTYPVLLFLHGYLLYNSFYS-QLLQHIASHGFIVVAPQLYTLAGPDGTDE--IKDAAAVI 106 (313)
T ss_pred CCceEEEEeCC-------CCCCCCEEEEECCCCCCcccHH-HHHHHHHhCCCEEEEecCCCcCCCCchhh--HHHHHHHH
Confidence 34555666654 2346799999999998887776 78999999999999999999754321111 11122223
Q ss_pred HHHHHHHHHh------CC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccC
Q 020741 116 GDVADFIQKN------LS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSV 173 (322)
Q Consensus 116 ~dl~~~l~~~------~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~ 173 (322)
+++.+.++.. .+ ++++++|||+||.+++.+|.+..+. .....+++++++++.
T Consensus 107 ~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~------~~~~~v~ali~ldPv 165 (313)
T PLN00021 107 NWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAV------SLPLKFSALIGLDPV 165 (313)
T ss_pred HHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhcccc------ccccceeeEEeeccc
Confidence 3333322211 23 6799999999999999999652211 001137888888874
No 78
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.74 E-value=6.7e-16 Score=120.89 Aligned_cols=222 Identities=21% Similarity=0.253 Sum_probs=136.4
Q ss_pred CcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEech
Q 020741 59 PPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LPPVLLGHSF 137 (322)
Q Consensus 59 ~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~ 137 (322)
++|+|+|+.+++...|. .+++.|....+.|+.++.+|.+..... ..+++++++...+.|.+..+ ++++|+|||+
T Consensus 1 ~~lf~~p~~gG~~~~y~-~la~~l~~~~~~v~~i~~~~~~~~~~~----~~si~~la~~y~~~I~~~~~~gp~~L~G~S~ 75 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYR-PLARALPDDVIGVYGIEYPGRGDDEPP----PDSIEELASRYAEAIRARQPEGPYVLAGWSF 75 (229)
T ss_dssp -EEEEESSTTCSGGGGH-HHHHHHTTTEEEEEEECSTTSCTTSHE----ESSHHHHHHHHHHHHHHHTSSSSEEEEEETH
T ss_pred CeEEEEcCCccCHHHHH-HHHHhCCCCeEEEEEEecCCCCCCCCC----CCCHHHHHHHHHHHhhhhCCCCCeeehccCc
Confidence 37999999999999997 899999764589999999999833332 36999999999999986777 6999999999
Q ss_pred hHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCcchhhhhhccchhhhHHHHHHhHhhhcccccccccccc
Q 020741 138 GGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFF 217 (322)
Q Consensus 138 Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (322)
||.+|+.+|+++.+. ...+..++++++.++............... ..............
T Consensus 76 Gg~lA~E~A~~Le~~--------G~~v~~l~liD~~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~------- 134 (229)
T PF00975_consen 76 GGILAFEMARQLEEA--------GEEVSRLILIDSPPPSIKERPRSREPSDEQ------FIEELRRIGGTPDA------- 134 (229)
T ss_dssp HHHHHHHHHHHHHHT--------T-SESEEEEESCSSTTCHSCHHHHHCHHHH------HHHHHHHHCHHHHH-------
T ss_pred cHHHHHHHHHHHHHh--------hhccCceEEecCCCCCcccchhhhhhhHHH------HHHHHHHhcCCchh-------
Confidence 999999999987764 233889999998655432111111000000 00000000000000
Q ss_pred CCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChh---hHHHHhhhcC--ceeEE
Q 020741 218 SSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQ---GLSETGSFYG--VLPVC 292 (322)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~---~~~~~~~~~~--~~~~~ 292 (322)
.....+....+...+... ....... .......-.+|.++.....|+..... ....+.+... .+++.
T Consensus 135 -~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 205 (229)
T PF00975_consen 135 -SLEDEELLARLLRALRDD-------FQALENY-SIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHD 205 (229)
T ss_dssp -HCHHHHHHHHHHHHHHHH-------HHHHHTC-S-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEE
T ss_pred -hhcCHHHHHHHHHHHHHH-------HHHHhhc-cCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEE
Confidence 000111111221111110 0001111 00111112568999999999887766 2333566554 67888
Q ss_pred ecCCcccceec-cchhhhHHHHHHHH
Q 020741 293 VEGVAHDMMLD-CSWEKGASVILSWL 317 (322)
Q Consensus 293 ~~~~gH~~~~~-~~~~~~~~~i~~fl 317 (322)
++| +|+.++. +. .++.+.|.+||
T Consensus 206 v~G-~H~~~l~~~~-~~i~~~I~~~~ 229 (229)
T PF00975_consen 206 VPG-DHFSMLKPHV-AEIAEKIAEWL 229 (229)
T ss_dssp ESS-ETTGHHSTTH-HHHHHHHHHHH
T ss_pred EcC-CCcEecchHH-HHHHHHHhccC
Confidence 886 9999887 44 78888888876
No 79
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.74 E-value=1.3e-17 Score=128.91 Aligned_cols=189 Identities=15% Similarity=0.096 Sum_probs=113.2
Q ss_pred chhhHhhhCCceEEEeCCCCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHh-----CC-CCcEEEEechhHHHHHHHHHH
Q 020741 77 HWLPFFADSGFDCYAVSLLGQGESDAPPG--TVAGSLQTHAGDVADFIQKN-----LS-LPPVLLGHSFGGLIIQYYIAR 148 (322)
Q Consensus 77 ~~~~~l~~~g~~v~~~D~~G~G~S~~~~~--~~~~~~~~~~~dl~~~l~~~-----~~-~~~~lvG~S~Gg~~a~~~a~~ 148 (322)
.....|+++||.|+.+|+||.+....... .....-...++|+.+.++.. .+ +++.++|+|+||.+++.++.+
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~ 84 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ 84 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcc
Confidence 44678889999999999999874322110 01112234455655555422 13 789999999999999999954
Q ss_pred HhhhhhccccCCCCC-cceEEEeccCCCCCCCcchhhhhhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHH
Q 020741 149 IRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVL 227 (322)
Q Consensus 149 ~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (322)
+|+ +++++..++............. . ....... +.......+...
T Consensus 85 ------------~~~~f~a~v~~~g~~d~~~~~~~~~~--------~--~~~~~~~------------~~~~~~~~~~~~ 130 (213)
T PF00326_consen 85 ------------HPDRFKAAVAGAGVSDLFSYYGTTDI--------Y--TKAEYLE------------YGDPWDNPEFYR 130 (213)
T ss_dssp ------------TCCGSSEEEEESE-SSTTCSBHHTCC--------H--HHGHHHH------------HSSTTTSHHHHH
T ss_pred ------------cceeeeeeeccceecchhcccccccc--------c--ccccccc------------cCccchhhhhhh
Confidence 888 7888888875432211100000 0 0000000 000000111111
Q ss_pred HHHHHHhhcCCCcccchhhhhcCCCCCCCCC--ccccEEEEeeCCCCccChhhHHHHhhhc-----CceeEEecCCcccc
Q 020741 228 RYQELMKESSRMPLFDLRKLNASLPVPSVPK--SSIKVLVLGAKDDFIVDAQGLSETGSFY-----GVLPVCVEGVAHDM 300 (322)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Pvl~i~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~ 300 (322)
.... ...+.+ +++|+|+++|++|..||++.+..+.+.+ +.+++++|++||..
T Consensus 131 ~~s~---------------------~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~ 189 (213)
T PF00326_consen 131 ELSP---------------------ISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGF 189 (213)
T ss_dssp HHHH---------------------GGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSST
T ss_pred hhcc---------------------ccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCC
Confidence 1110 001123 7899999999999999999888887766 28999999999976
Q ss_pred eeccchhhhHHHHHHHHhhh
Q 020741 301 MLDCSWEKGASVILSWLDGL 320 (322)
Q Consensus 301 ~~~~~~~~~~~~i~~fl~~~ 320 (322)
.......+..+.+.+||++.
T Consensus 190 ~~~~~~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 190 GNPENRRDWYERILDFFDKY 209 (213)
T ss_dssp TSHHHHHHHHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHH
Confidence 65444478899999999875
No 80
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.72 E-value=1.2e-15 Score=125.10 Aligned_cols=252 Identities=12% Similarity=0.024 Sum_probs=152.0
Q ss_pred CCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEech
Q 020741 58 RPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLPPVLLGHSF 137 (322)
Q Consensus 58 ~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~lvG~S~ 137 (322)
.|+||++..+.+........+++.|.+ |+.|+..|+..-+..+.... ..+++++++.+.++|+ +++.+++++|+|+
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~--~f~ldDYi~~l~~~i~-~~G~~v~l~GvCq 177 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAG--KFDLEDYIDYLIEFIR-FLGPDIHVIAVCQ 177 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcC--CCCHHHHHHHHHHHHH-HhCCCCcEEEEch
Confidence 479999999987766666678899988 99999999987765543333 5799999999999998 7785599999999
Q ss_pred hHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCC-cchhhhhhccchhhhH-----------------HH-
Q 020741 138 GGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNS-GLVWRYLFTKPIAAFK-----------------VT- 197 (322)
Q Consensus 138 Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------------~~- 197 (322)
||.+++.+++...++ ..|. +++++++.++...... .....+....+..... ..
T Consensus 178 gG~~~laa~Al~a~~-------~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~P 250 (406)
T TIGR01849 178 PAVPVLAAVALMAEN-------EPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYP 250 (406)
T ss_pred hhHHHHHHHHHHHhc-------CCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccC
Confidence 999999888765443 2565 9999999987655442 2222221110000000 00
Q ss_pred HHHhHhhhcc--cc-------ccccccccCCccchHHHHHHHHHHhhcCCCcccch----hhhhc-----------CCCC
Q 020741 198 RSLAAKAFQT--DL-------SLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDL----RKLNA-----------SLPV 253 (322)
Q Consensus 198 ~~~~~~~~~~--~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----------~~~~ 253 (322)
.......|.. .. ...........-..+....+.+.+..........+ ..+.. .-..
T Consensus 251 G~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~ 330 (406)
T TIGR01849 251 GFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKR 330 (406)
T ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEE
Confidence 0000000000 00 00000000000001111111111111111111111 01110 1112
Q ss_pred CCCCCcc-ccEEEEeeCCCCccChhhHHHHhhhc---C---ceeEEecCCcccceeccc--hhhhHHHHHHHHhhh
Q 020741 254 PSVPKSS-IKVLVLGAKDDFIVDAQGLSETGSFY---G---VLPVCVEGVAHDMMLDCS--WEKGASVILSWLDGL 320 (322)
Q Consensus 254 ~~~~~~~-~Pvl~i~g~~D~~~~~~~~~~~~~~~---~---~~~~~~~~~gH~~~~~~~--~~~~~~~i~~fl~~~ 320 (322)
-++.+|+ +|+|.+.|++|.+++++.+..+.+.+ + ++.+..+++||+..+... +++++..|.+||.++
T Consensus 331 Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 331 VDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred ecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 2356889 99999999999999999998888874 3 557777789999887654 688999999999763
No 81
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.72 E-value=2.5e-16 Score=127.04 Aligned_cols=236 Identities=15% Similarity=0.040 Sum_probs=129.9
Q ss_pred eeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCC
Q 020741 26 TRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPG 105 (322)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~ 105 (322)
....+...+|.+|+.+...|. ...++.|.||.+||.++....|. .. -.++..||.|+.+|.||+|.......
T Consensus 57 y~v~f~s~~g~~V~g~l~~P~------~~~~~~Pavv~~hGyg~~~~~~~-~~-~~~a~~G~~vl~~d~rGqg~~~~d~~ 128 (320)
T PF05448_consen 57 YDVSFESFDGSRVYGWLYRPK------NAKGKLPAVVQFHGYGGRSGDPF-DL-LPWAAAGYAVLAMDVRGQGGRSPDYR 128 (320)
T ss_dssp EEEEEEEGGGEEEEEEEEEES-------SSSSEEEEEEE--TT--GGGHH-HH-HHHHHTT-EEEEE--TTTSSSS-B-S
T ss_pred EEEEEEccCCCEEEEEEEecC------CCCCCcCEEEEecCCCCCCCCcc-cc-cccccCCeEEEEecCCCCCCCCCCcc
Confidence 345566668999999999876 23356789999999998877775 32 24677899999999999993221110
Q ss_pred ------------------CCCCCHHHHHHHHHHHHHH--hC---C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCC
Q 020741 106 ------------------TVAGSLQTHAGDVADFIQK--NL---S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPY 161 (322)
Q Consensus 106 ------------------~~~~~~~~~~~dl~~~l~~--~~---~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~ 161 (322)
...+-+..+..|+...++- .+ + ++|.+.|.|.||.+++.+|+- .
T Consensus 129 ~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaL------------d 196 (320)
T PF05448_consen 129 GSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAAL------------D 196 (320)
T ss_dssp SBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHH------------S
T ss_pred ccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHh------------C
Confidence 1112233455666555552 12 2 679999999999999999954 8
Q ss_pred CCcceEEEeccCCCCCCCcchhhhhh-ccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCc
Q 020741 162 PEIAGAVLVCSVPPSGNSGLVWRYLF-TKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMP 240 (322)
Q Consensus 162 p~v~~~vl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (322)
|+|++++...|...... ....... ..+... .... +... .. ..+......+.+.
T Consensus 197 ~rv~~~~~~vP~l~d~~--~~~~~~~~~~~y~~---~~~~----~~~~---------d~--~~~~~~~v~~~L~------ 250 (320)
T PF05448_consen 197 PRVKAAAADVPFLCDFR--RALELRADEGPYPE---IRRY----FRWR---------DP--HHEREPEVFETLS------ 250 (320)
T ss_dssp ST-SEEEEESESSSSHH--HHHHHT--STTTHH---HHHH----HHHH---------SC--THCHHHHHHHHHH------
T ss_pred ccccEEEecCCCccchh--hhhhcCCccccHHH---HHHH----Hhcc---------CC--CcccHHHHHHHHh------
Confidence 88999988877432200 0000000 000000 0000 0000 00 0001111111111
Q ss_pred ccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcC--ceeEEecCCcccceeccchhhh-HHHHHHHH
Q 020741 241 LFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG--VLPVCVEGVAHDMMLDCSWEKG-ASVILSWL 317 (322)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~-~~~i~~fl 317 (322)
.++...+ .++|+||+++-.|-.|.+||+...-...+.++ +++.+++..||... .++ .+...+||
T Consensus 251 Y~D~~nf--------A~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~-----~~~~~~~~~~~l 317 (320)
T PF05448_consen 251 YFDAVNF--------ARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYG-----PEFQEDKQLNFL 317 (320)
T ss_dssp TT-HHHH--------GGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTT-----HHHHHHHHHHHH
T ss_pred hhhHHHH--------HHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCch-----hhHHHHHHHHHH
Confidence 1111111 24799999999999999999999999988884 89999999999764 333 67788888
Q ss_pred hhh
Q 020741 318 DGL 320 (322)
Q Consensus 318 ~~~ 320 (322)
.++
T Consensus 318 ~~~ 320 (320)
T PF05448_consen 318 KEH 320 (320)
T ss_dssp HH-
T ss_pred hcC
Confidence 764
No 82
>PRK10162 acetyl esterase; Provisional
Probab=99.72 E-value=4.1e-15 Score=121.42 Aligned_cols=242 Identities=12% Similarity=0.068 Sum_probs=134.7
Q ss_pred ceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCC---cchhhcccchhhHhhh-CCceEEEeCCCCCCCC
Q 020741 25 QTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSY---HAAWCWAEHWLPFFAD-SGFDCYAVSLLGQGES 100 (322)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~---~~~~~~~~~~~~~l~~-~g~~v~~~D~~G~G~S 100 (322)
.+...+...+| .+..+.+.|. ....|+||++||.+ ++...|. .+...|++ .|+.|+.+|+|.....
T Consensus 57 ~~~~~i~~~~g-~i~~~~y~P~--------~~~~p~vv~~HGGg~~~g~~~~~~-~~~~~la~~~g~~Vv~vdYrlape~ 126 (318)
T PRK10162 57 TRAYMVPTPYG-QVETRLYYPQ--------PDSQATLFYLHGGGFILGNLDTHD-RIMRLLASYSGCTVIGIDYTLSPEA 126 (318)
T ss_pred EEEEEEecCCC-ceEEEEECCC--------CCCCCEEEEEeCCcccCCCchhhh-HHHHHHHHHcCCEEEEecCCCCCCC
Confidence 34455666666 5777777764 12468999999976 5566675 67788876 4899999999965433
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhC--C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCC-CCcceEEEeccCCCC
Q 020741 101 DAPPGTVAGSLQTHAGDVADFIQKNL--S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPY-PEIAGAVLVCSVPPS 176 (322)
Q Consensus 101 ~~~~~~~~~~~~~~~~dl~~~l~~~~--~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~-p~v~~~vl~~~~~~~ 176 (322)
..+.. ..+....++.+.+..+ .+ + .+++|+|+|+||.+++.++..+.+.+ .. +.+.+++++.+....
T Consensus 127 ~~p~~--~~D~~~a~~~l~~~~~-~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~------~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 127 RFPQA--IEEIVAVCCYFHQHAE-DYGINMSRIGFAGDSAGAMLALASALWLRDKQ------IDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred CCCCc--HHHHHHHHHHHHHhHH-HhCCChhHEEEEEECHHHHHHHHHHHHHHhcC------CCccChhheEEECCccCC
Confidence 22111 1112222223333333 23 3 68999999999999999997755431 12 348889998875432
Q ss_pred CCCcchhhhhhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCC
Q 020741 177 GNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSV 256 (322)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (322)
..... ... ... . ...++......+...+..........+... ....+
T Consensus 198 ~~~~s-~~~-------------------~~~-------~--~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p----~~~~l 244 (318)
T PRK10162 198 RDSVS-RRL-------------------LGG-------V--WDGLTQQDLQMYEEAYLSNDADRESPYYCL----FNNDL 244 (318)
T ss_pred CCChh-HHH-------------------hCC-------C--ccccCHHHHHHHHHHhCCCccccCCcccCc----chhhh
Confidence 11000 000 000 0 001122222323222211100000000000 00111
Q ss_pred CCccccEEEEeeCCCCccChhhHHHHhhhc-----CceeEEecCCcccceeccc----hhhhHHHHHHHHhhh
Q 020741 257 PKSSIKVLVLGAKDDFIVDAQGLSETGSFY-----GVLPVCVEGVAHDMMLDCS----WEKGASVILSWLDGL 320 (322)
Q Consensus 257 ~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~----~~~~~~~i~~fl~~~ 320 (322)
...-.|+++++|+.|.+.+ ....+.+.+ ++++++++|..|.+....+ ..+..+.+.+||++.
T Consensus 245 ~~~lPp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~ 315 (318)
T PRK10162 245 TRDVPPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQ 315 (318)
T ss_pred hcCCCCeEEEecCCCcCcC--hHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHH
Confidence 1233699999999999875 334444433 3899999999997653321 357778888888764
No 83
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.71 E-value=6.6e-16 Score=110.07 Aligned_cols=173 Identities=17% Similarity=0.157 Sum_probs=124.3
Q ss_pred CCCCcEEEEcCCC---cchh--hcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CC
Q 020741 56 EKRPPLVFVHGSY---HAAW--CWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LP 129 (322)
Q Consensus 56 ~~~~~vl~~HG~~---~~~~--~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~ 129 (322)
+..|..|++|.-+ ++.. .- ..++..|.++||.++.+|+||.|.|.+..+.. ..-.+-+..+.++++...+ .+
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv-~~la~~l~~~G~atlRfNfRgVG~S~G~fD~G-iGE~~Da~aaldW~~~~hp~s~ 103 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVV-QTLARALVKRGFATLRFNFRGVGRSQGEFDNG-IGELEDAAAALDWLQARHPDSA 103 (210)
T ss_pred CCCceEEecCCCccccCccCCHHH-HHHHHHHHhCCceEEeecccccccccCcccCC-cchHHHHHHHHHHHHhhCCCch
Confidence 5778899999753 2222 11 24678888999999999999999999987732 2333334444555553334 44
Q ss_pred c-EEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCcchhhhhhccchhhhHHHHHHhHhhhccc
Q 020741 130 P-VLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTD 208 (322)
Q Consensus 130 ~-~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (322)
. .+.|+|+|+.+++.+|.+ .|+....+.+.+....
T Consensus 104 ~~~l~GfSFGa~Ia~~la~r------------~~e~~~~is~~p~~~~-------------------------------- 139 (210)
T COG2945 104 SCWLAGFSFGAYIAMQLAMR------------RPEILVFISILPPINA-------------------------------- 139 (210)
T ss_pred hhhhcccchHHHHHHHHHHh------------cccccceeeccCCCCc--------------------------------
Confidence 4 689999999999999965 7776666655542100
Q ss_pred cccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcCc
Q 020741 209 LSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYGV 288 (322)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~ 288 (322)
|.. ..+....+|.++|+|+.|.+++.....++++....
T Consensus 140 --------------------~df----------------------s~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~~~ 177 (210)
T COG2945 140 --------------------YDF----------------------SFLAPCPSPGLVIQGDADDVVDLVAVLKWQESIKI 177 (210)
T ss_pred --------------------hhh----------------------hhccCCCCCceeEecChhhhhcHHHHHHhhcCCCC
Confidence 000 00124577999999999999999988888888779
Q ss_pred eeEEecCCcccceeccchhhhHHHHHHHHh
Q 020741 289 LPVCVEGVAHDMMLDCSWEKGASVILSWLD 318 (322)
Q Consensus 289 ~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~ 318 (322)
+++++++++|+++-.- ..+.+.|.+||.
T Consensus 178 ~~i~i~~a~HFF~gKl--~~l~~~i~~~l~ 205 (210)
T COG2945 178 TVITIPGADHFFHGKL--IELRDTIADFLE 205 (210)
T ss_pred ceEEecCCCceecccH--HHHHHHHHHHhh
Confidence 9999999999977654 588999999984
No 84
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.69 E-value=1.2e-15 Score=118.22 Aligned_cols=179 Identities=17% Similarity=0.193 Sum_probs=111.4
Q ss_pred CCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCC-CCCCCCCCC--------CCHHHHHHHHHHHHH---
Q 020741 56 EKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGE-SDAPPGTVA--------GSLQTHAGDVADFIQ--- 123 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~-S~~~~~~~~--------~~~~~~~~dl~~~l~--- 123 (322)
++.|.||++|++.+-..... .+++.|+++||.|+++|+.+-.. ......... ...+...+++.+.++
T Consensus 12 ~~~~~Vvv~~d~~G~~~~~~-~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~ 90 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNPNIR-DLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLR 90 (218)
T ss_dssp SSEEEEEEE-BTTBS-HHHH-HHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCchHHH-HHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 46789999999876664444 68999999999999999864433 111111000 012345566644444
Q ss_pred HhC--C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCcchhhhhhccchhhhHHHHHH
Q 020741 124 KNL--S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSL 200 (322)
Q Consensus 124 ~~~--~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (322)
... . ++|.++|+|+||.+++.++ ...+.+++.+..-+...
T Consensus 91 ~~~~~~~~kig~vGfc~GG~~a~~~a------------~~~~~~~a~v~~yg~~~------------------------- 133 (218)
T PF01738_consen 91 AQPEVDPGKIGVVGFCWGGKLALLLA------------ARDPRVDAAVSFYGGSP------------------------- 133 (218)
T ss_dssp CTTTCEEEEEEEEEETHHHHHHHHHH------------CCTTTSSEEEEES-SSS-------------------------
T ss_pred hccccCCCcEEEEEEecchHHhhhhh------------hhccccceEEEEcCCCC-------------------------
Confidence 222 2 5899999999999999999 34566888888654000
Q ss_pred hHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHH
Q 020741 201 AAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLS 280 (322)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~ 280 (322)
....... ..++++|+++++|++|+.++.+..+
T Consensus 134 ---------------------~~~~~~~---------------------------~~~~~~P~l~~~g~~D~~~~~~~~~ 165 (218)
T PF01738_consen 134 ---------------------PPPPLED---------------------------APKIKAPVLILFGENDPFFPPEEVE 165 (218)
T ss_dssp ---------------------GGGHHHH---------------------------GGG--S-EEEEEETT-TTS-HHHHH
T ss_pred ---------------------CCcchhh---------------------------hcccCCCEeecCccCCCCCChHHHH
Confidence 0000000 1368899999999999999998777
Q ss_pred HHhhhc-----CceeEEecCCcccceeccc-------hhhhHHHHHHHHhhh
Q 020741 281 ETGSFY-----GVLPVCVEGVAHDMMLDCS-------WEKGASVILSWLDGL 320 (322)
Q Consensus 281 ~~~~~~-----~~~~~~~~~~gH~~~~~~~-------~~~~~~~i~~fl~~~ 320 (322)
.+.+.+ ..++++++|++|.+..... .++.++.+.+||+++
T Consensus 166 ~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 166 ALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp HHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 666655 2899999999998876432 457778888998864
No 85
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.69 E-value=3.8e-15 Score=114.76 Aligned_cols=107 Identities=19% Similarity=0.192 Sum_probs=71.1
Q ss_pred CCCCcEEEEcCCCcchhhcc--cchhhHhhhCCceEEEeCCCCCCCCCCCCC----C---CCCCHHHHHHHHHHHHHHhC
Q 020741 56 EKRPPLVFVHGSYHAAWCWA--EHWLPFFADSGFDCYAVSLLGQGESDAPPG----T---VAGSLQTHAGDVADFIQKNL 126 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~--~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~----~---~~~~~~~~~~dl~~~l~~~~ 126 (322)
+..|+||++||.+++...+. ..+...+.+.||.|+++|++|++.+..... . ..........++.+.+.+..
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 90 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANY 90 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhc
Confidence 46799999999988776664 135555656799999999999875432111 0 00011111223333333233
Q ss_pred --C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCC
Q 020741 127 --S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVP 174 (322)
Q Consensus 127 --~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~ 174 (322)
+ ++++|+|||+||.+++.++.+ +|+ +.+++.+++.+
T Consensus 91 ~id~~~i~l~G~S~Gg~~a~~~a~~------------~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 91 SIDPNRVYVTGLSAGGGMTAVLGCT------------YPDVFAGGASNAGLP 130 (212)
T ss_pred CcChhheEEEEECHHHHHHHHHHHh------------CchhheEEEeecCCc
Confidence 3 689999999999999999954 888 78888887654
No 86
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.68 E-value=2.4e-15 Score=126.98 Aligned_cols=229 Identities=12% Similarity=0.133 Sum_probs=130.8
Q ss_pred CCCCcEEEEcCCCcchhhcc----cchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCC-
Q 020741 56 EKRPPLVFVHGSYHAAWCWA----EHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQK---NLS- 127 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~----~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~---~~~- 127 (322)
..+.+||+++.+......++ ..++++|.++||+|+.+|+++-+.+.. ..+++++++.+.+.|+. +.+
T Consensus 213 v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r-----~~~ldDYv~~i~~Ald~V~~~tG~ 287 (560)
T TIGR01839 213 QHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR-----EWGLSTYVDALKEAVDAVRAITGS 287 (560)
T ss_pred cCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc-----CCCHHHHHHHHHHHHHHHHHhcCC
Confidence 46789999999987777775 578999999999999999998665532 46788888777666663 346
Q ss_pred CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCC-C-cceEEEeccCCCCCCCcchhhhhhccchhhh--------HHH
Q 020741 128 LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYP-E-IAGAVLVCSVPPSGNSGLVWRYLFTKPIAAF--------KVT 197 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p-~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 197 (322)
+++.++|||+||.++..+++.+. ..++ + |++++++.+............+......... .+.
T Consensus 288 ~~vnl~GyC~GGtl~a~~~a~~a--------A~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lp 359 (560)
T TIGR01839 288 RDLNLLGACAGGLTCAALVGHLQ--------ALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLD 359 (560)
T ss_pred CCeeEEEECcchHHHHHHHHHHH--------hcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcC
Confidence 88999999999999997311111 2355 3 9999998886554332211111100000000 000
Q ss_pred HHHhHhhhccccc---cc---cccc-c---------------CCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCC
Q 020741 198 RSLAAKAFQTDLS---LC---KETF-F---------------SSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPS 255 (322)
Q Consensus 198 ~~~~~~~~~~~~~---~~---~~~~-~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (322)
...+...|..... .+ ...+ . ...++......|...+........ ..+.-.-..-+
T Consensus 360 g~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~ly~~N~L~~p---G~l~v~G~~id 436 (560)
T TIGR01839 360 GSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLDMFKSNPLTRP---DALEVCGTPID 436 (560)
T ss_pred HHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHHHHhcCCCCCC---CCEEECCEEec
Confidence 0000010100000 00 0000 0 011122222222221111110000 00000111234
Q ss_pred CCCccccEEEEeeCCCCccChhhHHHHhhhcC--ceeEEecCCcccce
Q 020741 256 VPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG--VLPVCVEGVAHDMM 301 (322)
Q Consensus 256 ~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~ 301 (322)
+.+|+||++++.|..|.++|++.+..+.+.++ ++++..+ +||..-
T Consensus 437 L~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~~-gGHIgg 483 (560)
T TIGR01839 437 LKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLSN-SGHIQS 483 (560)
T ss_pred hhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEecC-CCcccc
Confidence 67999999999999999999999999988885 6777766 589654
No 87
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.68 E-value=3.6e-16 Score=114.49 Aligned_cols=257 Identities=15% Similarity=0.124 Sum_probs=148.8
Q ss_pred EEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCC-C
Q 020741 28 VSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPG-T 106 (322)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~-~ 106 (322)
..+..+||..+....+... +..+--|.+-|..+-...|...++..+.++||.|+++|+||.|.|..... .
T Consensus 8 ~~l~~~DG~~l~~~~~pA~---------~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~ 78 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPAD---------GKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSG 78 (281)
T ss_pred cccccCCCccCccccccCC---------CCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCcccccc
Confidence 4567789999999888855 34443455555444444444489999999999999999999999987765 2
Q ss_pred CCCCHHHHHH-HHHHHHH---HhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCcc
Q 020741 107 VAGSLQTHAG-DVADFIQ---KNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSGL 181 (322)
Q Consensus 107 ~~~~~~~~~~-dl~~~l~---~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~~ 181 (322)
..+.+.+++. |+.+.|+ +.++ .+.+.||||+||.+.-.+. .++...+..+.++.+.... .
T Consensus 79 ~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-------------~~~k~~a~~vfG~gagwsg--~ 143 (281)
T COG4757 79 SQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLG-------------QHPKYAAFAVFGSGAGWSG--W 143 (281)
T ss_pred CccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecccc-------------cCcccceeeEecccccccc--c
Confidence 3466777664 5554444 3445 7899999999999877766 3555545544444322111 0
Q ss_pred hhhhhhccchhhhHHHHHHhHhhhccccccccccc--cCCccchHHHHHHHHHHhhcCCCccc-chhhhhcCCCCCCCCC
Q 020741 182 VWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETF--FSSSMEDHLVLRYQELMKESSRMPLF-DLRKLNASLPVPSVPK 258 (322)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 258 (322)
+.......... +..........+.......+ ....++-....++............. .+.. ..+....
T Consensus 144 m~~~~~l~~~~----l~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~-----~~q~yaa 214 (281)
T COG4757 144 MGLRERLGAVL----LWNLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRN-----YRQVYAA 214 (281)
T ss_pred hhhhhccccee----eccccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhH-----HHHHHHH
Confidence 00000000000 00000000000000011111 12234555555555444332210000 0000 0111247
Q ss_pred ccccEEEEeeCCCCccChhhHHHHhhhc-C--ceeEEecC----CcccceeccchhhhHHHHHHHH
Q 020741 259 SSIKVLVLGAKDDFIVDAQGLSETGSFY-G--VLPVCVEG----VAHDMMLDCSWEKGASVILSWL 317 (322)
Q Consensus 259 ~~~Pvl~i~g~~D~~~~~~~~~~~~~~~-~--~~~~~~~~----~gH~~~~~~~~~~~~~~i~~fl 317 (322)
+++||.++...+|+.+|+...+.+.+.. + .+...++. -||+..+.++.|.+.+.+.+|+
T Consensus 215 VrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 215 VRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred hcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 8999999999999999998888887765 3 55555554 4999888776677888888876
No 88
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.68 E-value=5.7e-15 Score=129.52 Aligned_cols=122 Identities=13% Similarity=0.063 Sum_probs=91.3
Q ss_pred eCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchh---hcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCC
Q 020741 31 QLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAW---CWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTV 107 (322)
Q Consensus 31 ~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~---~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~ 107 (322)
+..||.+|++..+.|. +.++.|+||++||++.+.. .+.......|.++||.|+++|+||+|.|.....
T Consensus 2 ~~~DG~~L~~~~~~P~-------~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~-- 72 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPA-------GGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFD-- 72 (550)
T ss_pred cCCCCCEEEEEEEecC-------CCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceE--
Confidence 4679999999998865 2236789999999986653 232234567888999999999999999987654
Q ss_pred CCCHHHHHHHHHHHHHHh-----CCCCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCC
Q 020741 108 AGSLQTHAGDVADFIQKN-----LSLPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVP 174 (322)
Q Consensus 108 ~~~~~~~~~dl~~~l~~~-----~~~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~ 174 (322)
.++ ...++|+.++|+.. .+.+|.++|||+||.+++.+|.. +|. +++++..++..
T Consensus 73 ~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~------------~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 73 LLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVL------------QPPALRAIAPQEGVW 132 (550)
T ss_pred ecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhcc------------CCCceeEEeecCccc
Confidence 222 45666766666622 12689999999999999999943 655 89998887753
No 89
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.68 E-value=1.1e-14 Score=112.49 Aligned_cols=257 Identities=17% Similarity=0.181 Sum_probs=144.8
Q ss_pred EEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhh-cccch-----hhHhhhCCceEEEeCCCCCCCCC
Q 020741 28 VSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWC-WAEHW-----LPFFADSGFDCYAVSLLGQGESD 101 (322)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~-~~~~~-----~~~l~~~g~~v~~~D~~G~G~S~ 101 (322)
+.++++-| .+++...|.. ..++|++|=.|-.|.+... |. .+ ...+.++ |.++-+|.||+....
T Consensus 2 h~v~t~~G-~v~V~v~G~~--------~~~kp~ilT~HDvGlNh~scF~-~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga 70 (283)
T PF03096_consen 2 HDVETPYG-SVHVTVQGDP--------KGNKPAILTYHDVGLNHKSCFQ-GFFNFEDMQEILQN-FCIYHIDAPGQEEGA 70 (283)
T ss_dssp EEEEETTE-EEEEEEESS----------TTS-EEEEE--TT--HHHHCH-HHHCSHHHHHHHTT-SEEEEEE-TTTSTT-
T ss_pred ceeccCce-EEEEEEEecC--------CCCCceEEEeccccccchHHHH-HHhcchhHHHHhhc-eEEEEEeCCCCCCCc
Confidence 45677667 8999999976 1259999999999877665 54 32 3455555 999999999996543
Q ss_pred C--CCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCC
Q 020741 102 A--PPGTVAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSG 177 (322)
Q Consensus 102 ~--~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~ 177 (322)
. +.+...-+++++++++.++++ +++ +.++-+|--.||.|-.++|.. +|+ |.++|++++.....
T Consensus 71 ~~~p~~y~yPsmd~LAe~l~~Vl~-~f~lk~vIg~GvGAGAnIL~rfAl~------------~p~~V~GLiLvn~~~~~~ 137 (283)
T PF03096_consen 71 ATLPEGYQYPSMDQLAEMLPEVLD-HFGLKSVIGFGVGAGANILARFALK------------HPERVLGLILVNPTCTAA 137 (283)
T ss_dssp ----TT-----HHHHHCTHHHHHH-HHT---EEEEEETHHHHHHHHHHHH------------SGGGEEEEEEES---S--
T ss_pred ccccccccccCHHHHHHHHHHHHH-hCCccEEEEEeeccchhhhhhcccc------------CccceeEEEEEecCCCCc
Confidence 3 333334689999999999999 899 999999999999999999954 998 99999999865332
Q ss_pred CCcch-hhhhhccchh----hhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCC-Ccccch-hh-hhc
Q 020741 178 NSGLV-WRYLFTKPIA----AFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSR-MPLFDL-RK-LNA 249 (322)
Q Consensus 178 ~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~-~~~ 249 (322)
....+ ........+. .......+....|..... ....+.++.|...+..... .....+ .. ..+
T Consensus 138 gw~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~---------~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R 208 (283)
T PF03096_consen 138 GWMEWFYQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEE---------ENNSDLVQTYRQHLDERINPKNLALFLNSYNSR 208 (283)
T ss_dssp -HHHHHHHHHH-------CTTS-HHHHHHHHHS-HHHH---------HCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-
T ss_pred cHHHHHHHHHhcccccccccccchHHhhhhcccccccc---------cccHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence 22111 1111100000 000000001111110000 0033455555555544332 111111 11 222
Q ss_pred CCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcC---ceeEEecCCcccceeccchhhhHHHHHHHHhhh
Q 020741 250 SLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG---VLPVCVEGVAHDMMLDCSWEKGASVILSWLDGL 320 (322)
Q Consensus 250 ~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 320 (322)
.+.....+...||+|++.|+..+.. +.+.++...++ .++..++++|=.+..|+| ..+++.+.=||+..
T Consensus 209 ~DL~~~~~~~~c~vLlvvG~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP-~klaea~~lFlQG~ 279 (283)
T PF03096_consen 209 TDLSIERPSLGCPVLLVVGDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQP-GKLAEAFKLFLQGM 279 (283)
T ss_dssp ----SECTTCCS-EEEEEETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-H-HHHHHHHHHHHHHT
T ss_pred ccchhhcCCCCCCeEEEEecCCcch--hhHHHHHhhcCcccceEEEecccCCcccccCc-HHHHHHHHHHHccC
Confidence 3333344567799999999998764 44556666664 889999999999999999 99999999998753
No 90
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.66 E-value=2.1e-15 Score=113.30 Aligned_cols=233 Identities=15% Similarity=0.043 Sum_probs=146.5
Q ss_pred eEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCC---
Q 020741 27 RVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAP--- 103 (322)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~--- 103 (322)
..+++..+|.+|..+..-|. ......|.||-.||++++...|.+ +. .++..||.|+.+|-||.|.|...
T Consensus 58 dvTf~g~~g~rI~gwlvlP~------~~~~~~P~vV~fhGY~g~~g~~~~-~l-~wa~~Gyavf~MdvRGQg~~~~dt~~ 129 (321)
T COG3458 58 DVTFTGYGGARIKGWLVLPR------HEKGKLPAVVQFHGYGGRGGEWHD-ML-HWAVAGYAVFVMDVRGQGSSSQDTAD 129 (321)
T ss_pred EEEEeccCCceEEEEEEeec------ccCCccceEEEEeeccCCCCCccc-cc-cccccceeEEEEecccCCCccccCCC
Confidence 35667778999999999876 222567999999999999888863 33 34557999999999999988431
Q ss_pred -CC---------------CCCCCHHHHHHHHHHHHHHhC-----C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCC
Q 020741 104 -PG---------------TVAGSLQTHAGDVADFIQKNL-----S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPY 161 (322)
Q Consensus 104 -~~---------------~~~~~~~~~~~dl~~~l~~~~-----~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~ 161 (322)
+. ...+-+.....|+...++... . ++|.+.|.|.||.+++.++ ...
T Consensus 130 ~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaa------------al~ 197 (321)
T COG3458 130 PPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAA------------ALD 197 (321)
T ss_pred CCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhh------------hcC
Confidence 11 112333445556655555222 2 7899999999999999999 568
Q ss_pred CCcceEEEeccCCCCCCCcchhhhhhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcc
Q 020741 162 PEIAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPL 241 (322)
Q Consensus 162 p~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (322)
|.+++++..-|.... ........... +-..+..|.+..... ..
T Consensus 198 ~rik~~~~~~Pfl~d--f~r~i~~~~~~--------------------------------~ydei~~y~k~h~~~---e~ 240 (321)
T COG3458 198 PRIKAVVADYPFLSD--FPRAIELATEG--------------------------------PYDEIQTYFKRHDPK---EA 240 (321)
T ss_pred hhhhccccccccccc--chhheeecccC--------------------------------cHHHHHHHHHhcCch---HH
Confidence 889998887664221 11111110000 111111111111110 11
Q ss_pred cchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcC--ceeEEecCCcccceeccchhhhHHHHHHHHhh
Q 020741 242 FDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG--VLPVCVEGVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
.-+..+.-.+......++++|+|+..|-.|++||+...-.+++.+. +++.+++--+|.-.. .-..+.+..|++.
T Consensus 241 ~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~p----~~~~~~~~~~l~~ 316 (321)
T COG3458 241 EVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGGP----GFQSRQQVHFLKI 316 (321)
T ss_pred HHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccCc----chhHHHHHHHHHh
Confidence 1111111122222235899999999999999999999888888874 788888876776543 3334556666654
Q ss_pred h
Q 020741 320 L 320 (322)
Q Consensus 320 ~ 320 (322)
+
T Consensus 317 l 317 (321)
T COG3458 317 L 317 (321)
T ss_pred h
Confidence 3
No 91
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.66 E-value=1.3e-15 Score=117.72 Aligned_cols=177 Identities=17% Similarity=0.213 Sum_probs=103.6
Q ss_pred CCCCCcEEEEcCCCcchhhcccchhh-HhhhCCceEEEeCCCC------CCCC--CCC------CCC--CCCCHHHHHHH
Q 020741 55 NEKRPPLVFVHGSYHAAWCWAEHWLP-FFADSGFDCYAVSLLG------QGES--DAP------PGT--VAGSLQTHAGD 117 (322)
Q Consensus 55 ~~~~~~vl~~HG~~~~~~~~~~~~~~-~l~~~g~~v~~~D~~G------~G~S--~~~------~~~--~~~~~~~~~~d 117 (322)
.+..++|||+||+|.+...|. .+.. .+......+++++-|- .|.. .+- ... ....+...++.
T Consensus 11 ~~~~~lvi~LHG~G~~~~~~~-~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSEDLFA-LLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp ST-SEEEEEE--TTS-HHHHH-HHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCCceEEEEECCCCCCcchhH-HHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 457889999999999987765 3333 2222346777776542 1220 110 000 01123334444
Q ss_pred HHHHHHHh----CC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcchhhhhhccch
Q 020741 118 VADFIQKN----LS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVWRYLFTKPI 191 (322)
Q Consensus 118 l~~~l~~~----~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~ 191 (322)
+.++|+.. .+ .+++|+|+|.||++++.++ ..+|. +.+++.+++..+.....
T Consensus 90 l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~------------l~~p~~~~gvv~lsG~~~~~~~~----------- 146 (216)
T PF02230_consen 90 LDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLA------------LRYPEPLAGVVALSGYLPPESEL----------- 146 (216)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHH------------HCTSSTSSEEEEES---TTGCCC-----------
T ss_pred HHHHHHHHHHcCCChhheehhhhhhHHHHHHHHH------------HHcCcCcCEEEEeeccccccccc-----------
Confidence 55555532 24 7899999999999999999 45887 99999998743211000
Q ss_pred hhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCC
Q 020741 192 AAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDD 271 (322)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D 271 (322)
. ... . ..-++|++++||.+|
T Consensus 147 -------------------------------~----------------------~~~-----~--~~~~~pi~~~hG~~D 166 (216)
T PF02230_consen 147 -------------------------------E----------------------DRP-----E--ALAKTPILIIHGDED 166 (216)
T ss_dssp -------------------------------H----------------------CCH-----C--CCCTS-EEEEEETT-
T ss_pred -------------------------------c----------------------ccc-----c--ccCCCcEEEEecCCC
Confidence 0 000 0 112679999999999
Q ss_pred CccChhhHHHHhhhc-----CceeEEecCCcccceeccchhhhHHHHHHHHhhh
Q 020741 272 FIVDAQGLSETGSFY-----GVLPVCVEGVAHDMMLDCSWEKGASVILSWLDGL 320 (322)
Q Consensus 272 ~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 320 (322)
+++|.+.++...+.+ +.+++.++|.||.+. .+..+.+.+||+++
T Consensus 167 ~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~-----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 167 PVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS-----PEELRDLREFLEKH 215 (216)
T ss_dssp SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-------HHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC-----HHHHHHHHHHHhhh
Confidence 999988877776665 288999999999874 56677788998864
No 92
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.66 E-value=2.4e-15 Score=110.11 Aligned_cols=157 Identities=18% Similarity=0.215 Sum_probs=103.0
Q ss_pred EEEEcCCCcc-hhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEechhH
Q 020741 61 LVFVHGSYHA-AWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLPPVLLGHSFGG 139 (322)
Q Consensus 61 vl~~HG~~~~-~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~lvG~S~Gg 139 (322)
|+++||++++ ...|...+.+.|... ++|-..|+- .-+.+++.+.+.+.|. ...+++++||||+|+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~~------------~P~~~~W~~~l~~~i~-~~~~~~ilVaHSLGc 66 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDWD------------NPDLDEWVQALDQAID-AIDEPTILVAHSLGC 66 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--T------------S--HHHHHHHHHHCCH-C-TTTEEEEEETHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEeccccC------------CCCHHHHHHHHHHHHh-hcCCCeEEEEeCHHH
Confidence 6899999765 556775566777666 777777761 2478888888888888 667889999999999
Q ss_pred HHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCcchhhhhhccchhhhHHHHHHhHhhhccccccccccccCC
Q 020741 140 LIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSS 219 (322)
Q Consensus 140 ~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (322)
..++.+++. ...-.|.+++++++........ .. .
T Consensus 67 ~~~l~~l~~----------~~~~~v~g~lLVAp~~~~~~~~------------------------~~-------~----- 100 (171)
T PF06821_consen 67 LTALRWLAE----------QSQKKVAGALLVAPFDPDDPEP------------------------FP-------P----- 100 (171)
T ss_dssp HHHHHHHHH----------TCCSSEEEEEEES--SCGCHHC------------------------CT-------C-----
T ss_pred HHHHHHHhh----------cccccccEEEEEcCCCcccccc------------------------hh-------h-----
Confidence 999999953 1223399999999853210000 00 0
Q ss_pred ccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcCceeEEecCCccc
Q 020741 220 SMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYGVLPVCVEGVAHD 299 (322)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 299 (322)
....+. ........+|.++|.+++|+++|.+.++.+++.++++++.++++||+
T Consensus 101 --------------------~~~~f~-------~~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l~a~~~~~~~~GHf 153 (171)
T PF06821_consen 101 --------------------ELDGFT-------PLPRDPLPFPSIVIASDNDPYVPFERAQRLAQRLGAELIILGGGGHF 153 (171)
T ss_dssp --------------------GGCCCT-------TSHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHHT-EEEEETS-TTS
T ss_pred --------------------hccccc-------cCcccccCCCeEEEEcCCCCccCHHHHHHHHHHcCCCeEECCCCCCc
Confidence 000000 00012456677999999999999999999999999999999999998
Q ss_pred ceecc
Q 020741 300 MMLDC 304 (322)
Q Consensus 300 ~~~~~ 304 (322)
...+.
T Consensus 154 ~~~~G 158 (171)
T PF06821_consen 154 NAASG 158 (171)
T ss_dssp SGGGT
T ss_pred ccccC
Confidence 76543
No 93
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.65 E-value=1.4e-13 Score=104.82 Aligned_cols=260 Identities=16% Similarity=0.139 Sum_probs=167.9
Q ss_pred ceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhh-cc----cchhhHhhhCCceEEEeCCCCCCC
Q 020741 25 QTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWC-WA----EHWLPFFADSGFDCYAVSLLGQGE 99 (322)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~-~~----~~~~~~l~~~g~~v~~~D~~G~G~ 99 (322)
.+++.+.+.-| .+++..+|.+ ..++|++|=.|..+.+... |. .+-+..+.++ |.++-+|.|||-.
T Consensus 22 ~~e~~V~T~~G-~v~V~V~Gd~--------~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~ 91 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYGDP--------KGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQED 91 (326)
T ss_pred ceeeeeccccc-cEEEEEecCC--------CCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCcccc
Confidence 56788888777 8899999966 1258889999999876554 43 1224566666 9999999999854
Q ss_pred C--CCCCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCC
Q 020741 100 S--DAPPGTVAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPP 175 (322)
Q Consensus 100 S--~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~ 175 (322)
. ..+.+...-+.++++++|..+++ +++ +.++-+|.-.|+.|..++| ..||+ |.++|++++.+.
T Consensus 92 gAp~~p~~y~yPsmd~LAd~l~~VL~-~f~lk~vIg~GvGAGAyIL~rFA------------l~hp~rV~GLvLIn~~~~ 158 (326)
T KOG2931|consen 92 GAPSFPEGYPYPSMDDLADMLPEVLD-HFGLKSVIGMGVGAGAYILARFA------------LNHPERVLGLVLINCDPC 158 (326)
T ss_pred CCccCCCCCCCCCHHHHHHHHHHHHH-hcCcceEEEecccccHHHHHHHH------------hcChhheeEEEEEecCCC
Confidence 3 33333334689999999999999 999 9999999999999999999 56999 999999998654
Q ss_pred CCCCcchhhhhhccchhhh-----HHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCC-Ccccch-hhhh
Q 020741 176 SGNSGLVWRYLFTKPIAAF-----KVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSR-MPLFDL-RKLN 248 (322)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~ 248 (322)
......+............ ....-++...|..... .-..+.++.|...+..... ..+..+ ..++
T Consensus 159 a~gwiew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~---------~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn 229 (326)
T KOG2931|consen 159 AKGWIEWAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEEL---------GNNSDIVQEYRQHLGERLNPKNLALFLNAYN 229 (326)
T ss_pred CchHHHHHHHHHHHHHHHhhchhhhHHHHHHHHHhccccc---------cccHHHHHHHHHHHHhcCChhHHHHHHHHhc
Confidence 3222111111000000000 0000111111111110 1145666777776665544 222111 1111
Q ss_pred c-CCCCCCCC----CccccEEEEeeCCCCccChhhHHHHhhhcC---ceeEEecCCcccceeccchhhhHHHHHHHHhh
Q 020741 249 A-SLPVPSVP----KSSIKVLVLGAKDDFIVDAQGLSETGSFYG---VLPVCVEGVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 249 ~-~~~~~~~~----~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
. .+...... .++||+|++.|++.+.+. ...++...++ ..+..+.++|-.+..++| ..+.+.+.=|++.
T Consensus 230 ~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP-~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 230 GRRDLSIERPKLGTTLKCPVLLVVGDNSPHVS--AVVECNSKLDPTYTTLLKMADCGGLVQEEQP-GKLAEAFKYFLQG 305 (326)
T ss_pred CCCCccccCCCcCccccccEEEEecCCCchhh--hhhhhhcccCcccceEEEEcccCCcccccCc-hHHHHHHHHHHcc
Confidence 1 11111111 567999999999987653 4455555553 888889999999999999 9999999988864
No 94
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.65 E-value=7.1e-16 Score=97.10 Aligned_cols=79 Identities=27% Similarity=0.406 Sum_probs=68.9
Q ss_pred CceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHH
Q 020741 35 GLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTH 114 (322)
Q Consensus 35 g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~ 114 (322)
|.+|+++.|.|++ +.+.+|+++||++.++..|. .+++.|+++||.|+++|+||||.|..... ...+++++
T Consensus 1 G~~L~~~~w~p~~--------~~k~~v~i~HG~~eh~~ry~-~~a~~L~~~G~~V~~~D~rGhG~S~g~rg-~~~~~~~~ 70 (79)
T PF12146_consen 1 GTKLFYRRWKPEN--------PPKAVVVIVHGFGEHSGRYA-HLAEFLAEQGYAVFAYDHRGHGRSEGKRG-HIDSFDDY 70 (79)
T ss_pred CcEEEEEEecCCC--------CCCEEEEEeCCcHHHHHHHH-HHHHHHHhCCCEEEEECCCcCCCCCCccc-ccCCHHHH
Confidence 6799999999871 14889999999999998886 89999999999999999999999987554 35789999
Q ss_pred HHHHHHHHH
Q 020741 115 AGDVADFIQ 123 (322)
Q Consensus 115 ~~dl~~~l~ 123 (322)
++|+..+++
T Consensus 71 v~D~~~~~~ 79 (79)
T PF12146_consen 71 VDDLHQFIQ 79 (79)
T ss_pred HHHHHHHhC
Confidence 999998874
No 95
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.64 E-value=1.3e-13 Score=102.29 Aligned_cols=222 Identities=16% Similarity=0.122 Sum_probs=118.8
Q ss_pred eEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCC-CCCCCCCC
Q 020741 27 RVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQ-GESDAPPG 105 (322)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~-G~S~~~~~ 105 (322)
.+.+...+|.+|+.++..|+ .......++||+..|++...+.|. .++.+|+..||+|+.+|-..| |.|++.-.
T Consensus 4 dhvi~~~~~~~I~vwet~P~-----~~~~~~~~tiliA~Gf~rrmdh~a-gLA~YL~~NGFhViRyDsl~HvGlSsG~I~ 77 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPK-----NNEPKRNNTILIAPGFARRMDHFA-GLAEYLSANGFHVIRYDSLNHVGLSSGDIN 77 (294)
T ss_dssp EEEEEETTTEEEEEEEE--------TTS---S-EEEEE-TT-GGGGGGH-HHHHHHHTTT--EEEE---B----------
T ss_pred cceeEcCCCCEEEEeccCCC-----CCCcccCCeEEEecchhHHHHHHH-HHHHHHhhCCeEEEeccccccccCCCCChh
Confidence 45678889999999999987 233345689999999999999997 899999999999999998877 89988876
Q ss_pred CCCCCHHHHHHHHHHHHHH--hCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCcch
Q 020741 106 TVAGSLQTHAGDVADFIQK--NLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSGLV 182 (322)
Q Consensus 106 ~~~~~~~~~~~dl~~~l~~--~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~~~ 182 (322)
.+++....+++..+++. ..+ .++.|+.-|+.|-+|+..|++ +++.-+|..-++...
T Consensus 78 --eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~-------------i~lsfLitaVGVVnl------ 136 (294)
T PF02273_consen 78 --EFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAAD-------------INLSFLITAVGVVNL------ 136 (294)
T ss_dssp -----HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTT-------------S--SEEEEES--S-H------
T ss_pred --hcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhc-------------cCcceEEEEeeeeeH------
Confidence 68998888888777762 235 789999999999999999943 345556555443210
Q ss_pred hhhhhccchhhhHHHHHHhHhhhcccc-----cc--ccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCC
Q 020741 183 WRYLFTKPIAAFKVTRSLAAKAFQTDL-----SL--CKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPS 255 (322)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (322)
...+.+.+.... .. ....+....+..+ .|...+....... +.... ..
T Consensus 137 ---------------r~TLe~al~~Dyl~~~i~~lp~dldfeGh~l~~~---vFv~dc~e~~w~~---l~ST~-----~~ 190 (294)
T PF02273_consen 137 ---------------RDTLEKALGYDYLQLPIEQLPEDLDFEGHNLGAE---VFVTDCFEHGWDD---LDSTI-----ND 190 (294)
T ss_dssp ---------------HHHHHHHHSS-GGGS-GGG--SEEEETTEEEEHH---HHHHHHHHTT-SS---HHHHH-----HH
T ss_pred ---------------HHHHHHHhccchhhcchhhCCCcccccccccchH---HHHHHHHHcCCcc---chhHH-----HH
Confidence 111111111000 00 0011111222222 2333333222211 11111 11
Q ss_pred CCCccccEEEEeeCCCCccChhhHHHHhhhcC---ceeEEecCCcccce
Q 020741 256 VPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG---VLPVCVEGVAHDMM 301 (322)
Q Consensus 256 ~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~gH~~~ 301 (322)
++.+.+|++.+++++|.++......++...++ .++..++|++|.+.
T Consensus 191 ~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 191 MKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG 239 (294)
T ss_dssp HTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT
T ss_pred HhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhh
Confidence 24689999999999999999988888887664 88999999999764
No 96
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.63 E-value=3.7e-15 Score=123.69 Aligned_cols=107 Identities=16% Similarity=0.208 Sum_probs=79.6
Q ss_pred CCCCcEEEEcCCCcch--hhcccchhhHhhh--CCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----C
Q 020741 56 EKRPPLVFVHGSYHAA--WCWAEHWLPFFAD--SGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKN-----L 126 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~--~~~~~~~~~~l~~--~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~-----~ 126 (322)
.++|++|++||++.+. ..|...+.+.|.. ..|+|+++|++|+|.|..+.. .......++++.++|+.. +
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a--~~~t~~vg~~la~lI~~L~~~~gl 116 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTS--AAYTKLVGKDVAKFVNWMQEEFNY 116 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccc--cccHHHHHHHHHHHHHHHHHhhCC
Confidence 4679999999997653 4565335555542 259999999999998876543 233456667777776632 2
Q ss_pred C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCC
Q 020741 127 S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPS 176 (322)
Q Consensus 127 ~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~ 176 (322)
+ ++++||||||||.+|..++.. .|+ |.++++++|+.+.
T Consensus 117 ~l~~VhLIGHSLGAhIAg~ag~~------------~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 117 PWDNVHLLGYSLGAHVAGIAGSL------------TKHKVNRITGLDPAGPT 156 (442)
T ss_pred CCCcEEEEEECHHHHHHHHHHHh------------CCcceeEEEEEcCCCCc
Confidence 4 799999999999999999854 676 9999999997543
No 97
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.62 E-value=2.2e-15 Score=119.85 Aligned_cols=124 Identities=15% Similarity=0.217 Sum_probs=85.3
Q ss_pred EEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcch-hhcccchhhHhh-hCCceEEEeCCCCCCCCCCCCC
Q 020741 28 VSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAA-WCWAEHWLPFFA-DSGFDCYAVSLLGQGESDAPPG 105 (322)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~-~~~~~~~~~~l~-~~g~~v~~~D~~G~G~S~~~~~ 105 (322)
+.+...|+..+.+..+. +++|++|++||+.++. ..|...+.+.+. ..+|+|+++|+++++.+..+..
T Consensus 17 ~~~~~~~~~~~~~~~f~-----------~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a 85 (275)
T cd00707 17 QLLFADDPSSLKNSNFN-----------PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQA 85 (275)
T ss_pred eEecCCChhhhhhcCCC-----------CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHH
Confidence 44444455566655555 4678999999998876 566544555444 4579999999998843322211
Q ss_pred CCCCCHHHHHHHHHHHHHH---h--CC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCC
Q 020741 106 TVAGSLQTHAGDVADFIQK---N--LS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPS 176 (322)
Q Consensus 106 ~~~~~~~~~~~dl~~~l~~---~--~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~ 176 (322)
..+.....+++..+|+. . ++ +++++||||+||.++..++.+ .|+ +.++++++|+.+.
T Consensus 86 --~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~------------~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 86 --VNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKR------------LNGKLGRITGLDPAGPL 149 (275)
T ss_pred --HHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHH------------hcCccceeEEecCCccc
Confidence 23444555566555552 2 24 789999999999999999965 565 9999999987544
No 98
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.62 E-value=1.2e-13 Score=106.93 Aligned_cols=197 Identities=17% Similarity=0.176 Sum_probs=139.9
Q ss_pred EEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCC-CCCCCCCC-
Q 020741 28 VSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQ-GESDAPPG- 105 (322)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~-G~S~~~~~- 105 (322)
..+..+| .++..+...|. +....|.||++|++.+-..... .+++.|+..||.|+++|+-+. |.+.....
T Consensus 5 v~~~~~~-~~~~~~~a~P~-------~~~~~P~VIv~hei~Gl~~~i~-~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~ 75 (236)
T COG0412 5 VTIPAPD-GELPAYLARPA-------GAGGFPGVIVLHEIFGLNPHIR-DVARRLAKAGYVVLAPDLYGRQGDPTDIEDE 75 (236)
T ss_pred eEeeCCC-ceEeEEEecCC-------cCCCCCEEEEEecccCCchHHH-HHHHHHHhCCcEEEechhhccCCCCCccccc
Confidence 4556655 57777777765 1223389999999977766665 789999999999999998763 43333321
Q ss_pred ---CC-----CCCHHHHHHHHHHHHHHhC------C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEe
Q 020741 106 ---TV-----AGSLQTHAGDVADFIQKNL------S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLV 170 (322)
Q Consensus 106 ---~~-----~~~~~~~~~dl~~~l~~~~------~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~ 170 (322)
.. ..+..+...|+.+.++ .+ . ++|.++|+||||.+++.++. ..|++++.+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~d~~a~~~-~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~------------~~~~v~a~v~f 142 (236)
T COG0412 76 PAELETGLVERVDPAEVLADIDAALD-YLARQPQVDPKRIGVVGFCMGGGLALLAAT------------RAPEVKAAVAF 142 (236)
T ss_pred HHHHhhhhhccCCHHHHHHHHHHHHH-HHHhCCCCCCceEEEEEEcccHHHHHHhhc------------ccCCccEEEEe
Confidence 00 1233567777777766 33 2 67999999999999999994 36678888886
Q ss_pred ccCCCCCCCcchhhhhhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcC
Q 020741 171 CSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNAS 250 (322)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (322)
-+.......
T Consensus 143 yg~~~~~~~----------------------------------------------------------------------- 151 (236)
T COG0412 143 YGGLIADDT----------------------------------------------------------------------- 151 (236)
T ss_pred cCCCCCCcc-----------------------------------------------------------------------
Confidence 653211000
Q ss_pred CCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhc-----CceeEEecCCcccceecc----c------hhhhHHHHHH
Q 020741 251 LPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFY-----GVLPVCVEGVAHDMMLDC----S------WEKGASVILS 315 (322)
Q Consensus 251 ~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~----~------~~~~~~~i~~ 315 (322)
....++++|+|+++|+.|..+|.+....+.+.+ ..++.+++++.|.++.+. + .+..++.+.+
T Consensus 152 ---~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ 228 (236)
T COG0412 152 ---ADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLA 228 (236)
T ss_pred ---cccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHH
Confidence 001479999999999999999988766666554 377899999999888542 1 4677888889
Q ss_pred HHhhh
Q 020741 316 WLDGL 320 (322)
Q Consensus 316 fl~~~ 320 (322)
|+++.
T Consensus 229 ff~~~ 233 (236)
T COG0412 229 FFKRL 233 (236)
T ss_pred HHHHh
Confidence 98875
No 99
>PRK10115 protease 2; Provisional
Probab=99.61 E-value=8.8e-14 Score=124.06 Aligned_cols=218 Identities=15% Similarity=0.129 Sum_probs=134.2
Q ss_pred ceeEEEeCCCCceEEEEE-ecCCCCCCCCCCCCCCCcEEEEcCCCcchh--hcccchhhHhhhCCceEEEeCCCCCCCCC
Q 020741 25 QTRVSHQLPSGLNIEVIE-QKSVTSKDPDTKNEKRPPLVFVHGSYHAAW--CWAEHWLPFFADSGFDCYAVSLLGQGESD 101 (322)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~-~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~--~~~~~~~~~l~~~g~~v~~~D~~G~G~S~ 101 (322)
.++.+++..||.+|.+.. +.+. .....+.|+||++||..+... .|. .....|.++||.|+.++.||-|.-.
T Consensus 416 ~e~v~~~s~DG~~Ip~~l~~~~~-----~~~~~~~P~ll~~hGg~~~~~~p~f~-~~~~~l~~rG~~v~~~n~RGs~g~G 489 (686)
T PRK10115 416 SEHLWITARDGVEVPVSLVYHRK-----HFRKGHNPLLVYGYGSYGASIDADFS-FSRLSLLDRGFVYAIVHVRGGGELG 489 (686)
T ss_pred EEEEEEECCCCCEEEEEEEEECC-----CCCCCCCCEEEEEECCCCCCCCCCcc-HHHHHHHHCCcEEEEEEcCCCCccC
Confidence 366778889999999844 4332 111245699999999865553 343 4456788899999999999965443
Q ss_pred CCC------CCCCCCHHHHHHHHHHHHHHhC-C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEecc
Q 020741 102 APP------GTVAGSLQTHAGDVADFIQKNL-S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCS 172 (322)
Q Consensus 102 ~~~------~~~~~~~~~~~~dl~~~l~~~~-~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~ 172 (322)
..- .....+++++++.+..++++-. . +++.+.|.|.||.++..++. .+|+ ++++|+..+
T Consensus 490 ~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~------------~~Pdlf~A~v~~vp 557 (686)
T PRK10115 490 QQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAIN------------QRPELFHGVIAQVP 557 (686)
T ss_pred HHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHh------------cChhheeEEEecCC
Confidence 211 1112466666666666666433 3 78999999999999999994 4898 777777666
Q ss_pred CCCCCCCcchhhhhhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCC
Q 020741 173 VPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLP 252 (322)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (322)
....... +.. ..+..... .... +.....++ ....+....+
T Consensus 558 ~~D~~~~------~~~--------------~~~p~~~~-~~~e-~G~p~~~~------------------~~~~l~~~SP 597 (686)
T PRK10115 558 FVDVVTT------MLD--------------ESIPLTTG-EFEE-WGNPQDPQ------------------YYEYMKSYSP 597 (686)
T ss_pred chhHhhh------ccc--------------CCCCCChh-HHHH-hCCCCCHH------------------HHHHHHHcCc
Confidence 4311100 000 00000000 0000 01011111 1111223344
Q ss_pred CCCCCCcccc-EEEEeeCCCCccChhhHHHHhhhcC-----ceeEEe---cCCcccc
Q 020741 253 VPSVPKSSIK-VLVLGAKDDFIVDAQGLSETGSFYG-----VLPVCV---EGVAHDM 300 (322)
Q Consensus 253 ~~~~~~~~~P-vl~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~---~~~gH~~ 300 (322)
...+.+++.| +|+++|.+|.-|++..+.++...+. .+++++ +++||..
T Consensus 598 ~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~ 654 (686)
T PRK10115 598 YDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGG 654 (686)
T ss_pred hhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCC
Confidence 4555677889 5677999999999988888777662 677777 8999984
No 100
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.60 E-value=2.3e-13 Score=111.62 Aligned_cols=276 Identities=13% Similarity=0.130 Sum_probs=165.6
Q ss_pred CceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhccc-----chhhHhhhCCceEEEeCCCCCC
Q 020741 24 GQTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAE-----HWLPFFADSGFDCYAVSLLGQG 98 (322)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~-----~~~~~l~~~g~~v~~~D~~G~G 98 (322)
+.++..+++.||..+........ + .++|+|++.||+.+++..|.. .++-.|+++||+|+.-+.||--
T Consensus 47 ~~E~h~V~T~DgYiL~lhRIp~~-------~-~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ 118 (403)
T KOG2624|consen 47 PVEEHEVTTEDGYILTLHRIPRG-------K-KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNT 118 (403)
T ss_pred ceEEEEEEccCCeEEEEeeecCC-------C-CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcc
Confidence 46889999999997777666533 1 688999999999999999862 2455788999999999999976
Q ss_pred CCCCCC--------CCCCCCHHHHHH-HHHHHHHHhC---C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC--
Q 020741 99 ESDAPP--------GTVAGSLQTHAG-DVADFIQKNL---S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-- 163 (322)
Q Consensus 99 ~S~~~~--------~~~~~~~~~~~~-dl~~~l~~~~---~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-- 163 (322)
.|.... ....+++.+++. ||-+.|+..+ + .+++.+|||.|+...+..+.. .|+
T Consensus 119 ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~------------~p~~~ 186 (403)
T KOG2624|consen 119 YSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSE------------RPEYN 186 (403)
T ss_pred cchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcc------------cchhh
Confidence 664322 145577888765 7777777554 4 789999999999999998854 433
Q ss_pred --cceEEEeccCCCCCCCcchhhhhhcc---------------c-hhhhHHHHHHhHhhhc------------------c
Q 020741 164 --IAGAVLVCSVPPSGNSGLVWRYLFTK---------------P-IAAFKVTRSLAAKAFQ------------------T 207 (322)
Q Consensus 164 --v~~~vl~~~~~~~~~~~~~~~~~~~~---------------~-~~~~~~~~~~~~~~~~------------------~ 207 (322)
|+..++++|+................ . .........+...... .
T Consensus 187 ~kI~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~ 266 (403)
T KOG2624|consen 187 KKIKSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGW 266 (403)
T ss_pred hhhheeeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCc
Confidence 89999999876333111110000000 0 0000000000000000 0
Q ss_pred cccc-------ccccccCCccchHHHHHHHHHHhhcCCCcccchhh------h-hcCCCCCCCCCccccEEEEeeCCCCc
Q 020741 208 DLSL-------CKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRK------L-NASLPVPSVPKSSIKVLVLGAKDDFI 273 (322)
Q Consensus 208 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~Pvl~i~g~~D~~ 273 (322)
.... ......+...+-..+..|.+....... ...++.. . ....+.-.+.++++|+.+.+|++|.+
T Consensus 267 ~~~~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f-~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l 345 (403)
T KOG2624|consen 267 NSNNWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKF-RKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWL 345 (403)
T ss_pred chHhhhhcccchhhccCCCCccHHHHHHHHHHhcCCCc-cccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCccc
Confidence 0000 000001112233334444443332221 1112111 1 11223445678899999999999999
Q ss_pred cChhhHHHHhhhc-Cc---eeEEecCCcccceecc--chhhhHHHHHHHHhhh
Q 020741 274 VDAQGLSETGSFY-GV---LPVCVEGVAHDMMLDC--SWEKGASVILSWLDGL 320 (322)
Q Consensus 274 ~~~~~~~~~~~~~-~~---~~~~~~~~gH~~~~~~--~~~~~~~~i~~fl~~~ 320 (322)
+.++....+.... +. ..+.+++-.|.-++-. .++++.+.|.+.++..
T Consensus 346 ~~~~DV~~~~~~~~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~ 398 (403)
T KOG2624|consen 346 ADPEDVLILLLVLPNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLF 398 (403)
T ss_pred CCHHHHHHHHHhcccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhh
Confidence 9999888665544 42 2223788889755422 2489999999888753
No 101
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.59 E-value=8.9e-14 Score=122.68 Aligned_cols=118 Identities=18% Similarity=0.187 Sum_probs=87.7
Q ss_pred EEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCC-----
Q 020741 29 SHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAP----- 103 (322)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~----- 103 (322)
.+..++|.++.|...+...+-. .......|+|||+||++++...|. .+++.|.++||+|+++|+||||.|...
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~-~~p~~g~P~VVllHG~~g~~~~~~-~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~ 498 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETF-AAPTDGWPVVIYQHGITGAKENAL-AFAGTLAAAGVATIAIDHPLHGARSFDANASG 498 (792)
T ss_pred EEEecCcchhhhhhcccccccc-cCCCCCCcEEEEeCCCCCCHHHHH-HHHHHHHhCCcEEEEeCCCCCCcccccccccc
Confidence 5566688888888766431100 011123579999999999999997 889999988999999999999999543
Q ss_pred ----CC-CC-----------CCCHHHHHHHHHHHHHHhC---------------C-CCcEEEEechhHHHHHHHHHH
Q 020741 104 ----PG-TV-----------AGSLQTHAGDVADFIQKNL---------------S-LPPVLLGHSFGGLIIQYYIAR 148 (322)
Q Consensus 104 ----~~-~~-----------~~~~~~~~~dl~~~l~~~~---------------~-~~~~lvG~S~Gg~~a~~~a~~ 148 (322)
.. .. ..++.+.+.|+..+....- + .+++++||||||+++..++..
T Consensus 499 ~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 499 VNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred ccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 11 11 1277889999887766332 2 589999999999999999964
No 102
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.58 E-value=1.8e-14 Score=112.37 Aligned_cols=242 Identities=18% Similarity=0.205 Sum_probs=84.9
Q ss_pred CCCcEEEEcCCCcchh--hcccchhhHhhhCCceEEEeCCC----CCCCCCCCCCCCCCCHHHHHHHHHHHHH---HhC-
Q 020741 57 KRPPLVFVHGSYHAAW--CWAEHWLPFFADSGFDCYAVSLL----GQGESDAPPGTVAGSLQTHAGDVADFIQ---KNL- 126 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~--~~~~~~~~~l~~~g~~v~~~D~~----G~G~S~~~~~~~~~~~~~~~~dl~~~l~---~~~- 126 (322)
....||||.|++.... .|...+++.|.+.||.++-+-++ |+|. .+++.-++||.++|+ ...
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~---------~SL~~D~~eI~~~v~ylr~~~~ 102 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGT---------SSLDRDVEEIAQLVEYLRSEKG 102 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S-----------HHHHHHHHHHHHHHHHHHS-
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCc---------chhhhHHHHHHHHHHHHHHhhc
Confidence 5568999999865433 34456788887779999999865 3442 477777888777666 221
Q ss_pred ---C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCcchhhhhhccchhhhHHHHHHhH
Q 020741 127 ---S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAA 202 (322)
Q Consensus 127 ---~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (322)
+ ++|+|+|||.|+.-++.|+...... ...+.|.+.|+-+|+............ ..............+.
T Consensus 103 g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~------~~~~~VdG~ILQApVSDREa~~~~~~~-~~~~~~~v~~A~~~i~ 175 (303)
T PF08538_consen 103 GHFGREKIVLMGHSTGCQDVLHYLSSPNPS------PSRPPVDGAILQAPVSDREAILNFLGE-REAYEELVALAKELIA 175 (303)
T ss_dssp -----S-EEEEEECCHHHHHHHHHHH-TT---------CCCEEEEEEEEE---TTSTTTSHHH----HHHHHHHHHHHHH
T ss_pred cccCCccEEEEecCCCcHHHHHHHhccCcc------ccccceEEEEEeCCCCChhHhhhcccc-hHHHHHHHHHHHHHHH
Confidence 3 6899999999999999999773211 012559999999997655443322211 0000001111111111
Q ss_pred hhhccc--c-ccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhh-
Q 020741 203 KAFQTD--L-SLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQG- 278 (322)
Q Consensus 203 ~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~- 278 (322)
...... . ......++.. +-...+|...........++. ..+........+.++++|+|++.+++|+.+|...
T Consensus 176 ~g~~~~~lp~~~~~~~~~~~---PiTA~Rf~SL~s~~gdDD~FS-SDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vd 251 (303)
T PF08538_consen 176 EGKGDEILPREFTPLVFYDT---PITAYRFLSLASPGGDDDYFS-SDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVD 251 (303)
T ss_dssp CT-TT-GG----GGTTT-SS------HHHHHT-S-SSHHHHTHH-HHHTT-HHHHTGGG--S-EEEEEE--TT-------
T ss_pred cCCCCceeeccccccccCCC---cccHHHHHhccCCCCcccccC-CCCCHHHHHHHhccCCCceEEEecCCCceeccccc
Confidence 110000 0 0000011111 112222222211111000000 0111111122345788899999999999998642
Q ss_pred ----HHHHhhhcC-----ceeEEecCCcccceeccc---hhhhHHHHHHHHh
Q 020741 279 ----LSETGSFYG-----VLPVCVEGVAHDMMLDCS---WEKGASVILSWLD 318 (322)
Q Consensus 279 ----~~~~~~~~~-----~~~~~~~~~gH~~~~~~~---~~~~~~~i~~fl~ 318 (322)
.+++.+..+ ....++|||+|.+-.+.. .+.+.+.|..||+
T Consensus 252 k~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 252 KEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp ----------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 222222222 234589999999875443 3467888888874
No 103
>COG0400 Predicted esterase [General function prediction only]
Probab=99.55 E-value=2.6e-13 Score=101.65 Aligned_cols=172 Identities=16% Similarity=0.135 Sum_probs=108.7
Q ss_pred CCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCC--CCCCCCCC--CCCCCCHHHHHH---HHHHHHHH---
Q 020741 55 NEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLG--QGESDAPP--GTVAGSLQTHAG---DVADFIQK--- 124 (322)
Q Consensus 55 ~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G--~G~S~~~~--~~~~~~~~~~~~---dl~~~l~~--- 124 (322)
.+..|+||++||+|++...+. .+...+..+ +.++.+--+= .|.-.... ....++.++... .+.++++.
T Consensus 15 ~p~~~~iilLHG~Ggde~~~~-~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~ 92 (207)
T COG0400 15 DPAAPLLILLHGLGGDELDLV-PLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAE 92 (207)
T ss_pred CCCCcEEEEEecCCCChhhhh-hhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHH
Confidence 356778999999999888876 455554443 5555542110 11110000 011223232222 22333321
Q ss_pred hC--C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcchhhhhhccchhhhHHHHHH
Q 020741 125 NL--S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSL 200 (322)
Q Consensus 125 ~~--~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (322)
.. + .+++++|+|-||++++.+.. .+|. +++++++.+..+....
T Consensus 93 ~~gi~~~~ii~~GfSqGA~ial~~~l------------~~~~~~~~ail~~g~~~~~~~--------------------- 139 (207)
T COG0400 93 EYGIDSSRIILIGFSQGANIALSLGL------------TLPGLFAGAILFSGMLPLEPE--------------------- 139 (207)
T ss_pred HhCCChhheEEEecChHHHHHHHHHH------------hCchhhccchhcCCcCCCCCc---------------------
Confidence 22 3 78999999999999999994 4887 8888888875322110
Q ss_pred hHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHH
Q 020741 201 AAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLS 280 (322)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~ 280 (322)
.....-.+|+++++|..|++||...+.
T Consensus 140 -----------------------------------------------------~~~~~~~~pill~hG~~Dpvvp~~~~~ 166 (207)
T COG0400 140 -----------------------------------------------------LLPDLAGTPILLSHGTEDPVVPLALAE 166 (207)
T ss_pred -----------------------------------------------------cccccCCCeEEEeccCcCCccCHHHHH
Confidence 000134679999999999999988877
Q ss_pred HHhhhc-----CceeEEecCCcccceeccchhhhHHHHHHHHhhh
Q 020741 281 ETGSFY-----GVLPVCVEGVAHDMMLDCSWEKGASVILSWLDGL 320 (322)
Q Consensus 281 ~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 320 (322)
++.+.+ +++...++ .||.+. .+-.+.+.+|+.+.
T Consensus 167 ~l~~~l~~~g~~v~~~~~~-~GH~i~-----~e~~~~~~~wl~~~ 205 (207)
T COG0400 167 ALAEYLTASGADVEVRWHE-GGHEIP-----PEELEAARSWLANT 205 (207)
T ss_pred HHHHHHHHcCCCEEEEEec-CCCcCC-----HHHHHHHHHHHHhc
Confidence 777665 27888888 799884 45566777788653
No 104
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.54 E-value=2.8e-13 Score=106.41 Aligned_cols=118 Identities=29% Similarity=0.438 Sum_probs=98.4
Q ss_pred CCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhC---C------ceEEEeCCCCCCCCCCCC
Q 020741 34 SGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADS---G------FDCYAVSLLGQGESDAPP 104 (322)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~---g------~~v~~~D~~G~G~S~~~~ 104 (322)
.|.+||+....++ +....+.-.++|++|||+++-+.|. .+++.|.+. | |.||++.+||+|.|+.+.
T Consensus 132 eGL~iHFlhvk~p----~~k~~k~v~PlLl~HGwPGsv~EFy-kfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~s 206 (469)
T KOG2565|consen 132 EGLKIHFLHVKPP----QKKKKKKVKPLLLLHGWPGSVREFY-KFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPS 206 (469)
T ss_pred cceeEEEEEecCC----ccccCCcccceEEecCCCchHHHHH-hhhhhhcCccccCCccceeEEEeccCCCCcccCcCCc
Confidence 7999999888866 2233345568999999999999998 788888764 2 789999999999999988
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEe
Q 020741 105 GTVAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLV 170 (322)
Q Consensus 105 ~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~ 170 (322)
.. ..+..+.+.-+..++- .++ .++.+-|..||+.|+..+| ..+|+ |.++-+-
T Consensus 207 k~-GFn~~a~ArvmrkLMl-RLg~nkffiqGgDwGSiI~snla------------sLyPenV~GlHln 260 (469)
T KOG2565|consen 207 KT-GFNAAATARVMRKLML-RLGYNKFFIQGGDWGSIIGSNLA------------SLYPENVLGLHLN 260 (469)
T ss_pred cC-CccHHHHHHHHHHHHH-HhCcceeEeecCchHHHHHHHHH------------hhcchhhhHhhhc
Confidence 73 4788888888888888 899 9999999999999999999 45888 7776543
No 105
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.48 E-value=1.6e-12 Score=91.89 Aligned_cols=175 Identities=18% Similarity=0.200 Sum_probs=117.9
Q ss_pred CcEEEEcCCCcch-hhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEech
Q 020741 59 PPLVFVHGSYHAA-WCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLPPVLLGHSF 137 (322)
Q Consensus 59 ~~vl~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~lvG~S~ 137 (322)
+.+|++||+.++. ..|...+...|. .+-.+++. +. ..-..+++++.+.+.+. ...++++||+||+
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~----~a~rveq~-----~w----~~P~~~dWi~~l~~~v~-a~~~~~vlVAHSL 68 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALP----NARRVEQD-----DW----EAPVLDDWIARLEKEVN-AAEGPVVLVAHSL 68 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCc----cchhcccC-----CC----CCCCHHHHHHHHHHHHh-ccCCCeEEEEecc
Confidence 5699999996554 445433333332 23333332 11 13478899999999988 6678899999999
Q ss_pred hHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCcchhhhhhccchhhhHHHHHHhHhhhcccccccccccc
Q 020741 138 GGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFF 217 (322)
Q Consensus 138 Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (322)
|+..++.++.+. .+.|.+.++++++-......
T Consensus 69 Gc~~v~h~~~~~-----------~~~V~GalLVAppd~~~~~~------------------------------------- 100 (181)
T COG3545 69 GCATVAHWAEHI-----------QRQVAGALLVAPPDVSRPEI------------------------------------- 100 (181)
T ss_pred cHHHHHHHHHhh-----------hhccceEEEecCCCcccccc-------------------------------------
Confidence 999999999762 22599999998753221000
Q ss_pred CCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcCceeEEecCCc
Q 020741 218 SSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYGVLPVCVEGVA 297 (322)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~g 297 (322)
.....-.+. .........|.+++.+.+|++++.+.++.+++..+..++.+..+|
T Consensus 101 --------~~~~~~tf~------------------~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs~lv~~g~~G 154 (181)
T COG3545 101 --------RPKHLMTFD------------------PIPREPLPFPSVVVASRNDPYVSYEHAEDLANAWGSALVDVGEGG 154 (181)
T ss_pred --------chhhccccC------------------CCccccCCCceeEEEecCCCCCCHHHHHHHHHhccHhheeccccc
Confidence 000000000 000124566999999999999999999999999999999999999
Q ss_pred ccceecc--chhhhHHHHHHHHhhhc
Q 020741 298 HDMMLDC--SWEKGASVILSWLDGLR 321 (322)
Q Consensus 298 H~~~~~~--~~~~~~~~i~~fl~~~~ 321 (322)
|..-.+. ++.+....+.+|+.+..
T Consensus 155 HiN~~sG~g~wpeg~~~l~~~~s~~~ 180 (181)
T COG3545 155 HINAESGFGPWPEGYALLAQLLSRAT 180 (181)
T ss_pred ccchhhcCCCcHHHHHHHHHHhhhhc
Confidence 9754322 24677788888876643
No 106
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.46 E-value=1.8e-12 Score=103.84 Aligned_cols=122 Identities=16% Similarity=0.107 Sum_probs=79.7
Q ss_pred CCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcch-hhcc--cc------hhhHhhhCCceEEEeCCCCCCCCCCCC
Q 020741 34 SGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAA-WCWA--EH------WLPFFADSGFDCYAVSLLGQGESDAPP 104 (322)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~-~~~~--~~------~~~~l~~~g~~v~~~D~~G~G~S~~~~ 104 (322)
||++|....+.|. ......-|+||..|+++.+. .... .. ....|.++||.|+..|.||.|.|.+..
T Consensus 1 DGv~L~adv~~P~-----~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~ 75 (272)
T PF02129_consen 1 DGVRLAADVYRPG-----ADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEF 75 (272)
T ss_dssp TS-EEEEEEEEE-------TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B
T ss_pred CCCEEEEEEEecC-----CCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCcc
Confidence 7899999999971 12345678999999998543 1111 01 112388999999999999999999887
Q ss_pred CCCCCCHHHHHHHHHHHHHH--hCC---CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCC
Q 020741 105 GTVAGSLQTHAGDVADFIQK--NLS---LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVP 174 (322)
Q Consensus 105 ~~~~~~~~~~~~dl~~~l~~--~~~---~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~ 174 (322)
... ....++|..+.|+. ..+ .+|.++|.|++|..++.+|+. ..|.+++++...+..
T Consensus 76 ~~~---~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~-----------~~p~LkAi~p~~~~~ 136 (272)
T PF02129_consen 76 DPM---SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAAR-----------RPPHLKAIVPQSGWS 136 (272)
T ss_dssp -TT---SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTT-----------T-TTEEEEEEESE-S
T ss_pred ccC---ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhc-----------CCCCceEEEecccCC
Confidence 621 44445554444441 123 689999999999999999942 355699998887754
No 107
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.46 E-value=1.2e-10 Score=93.86 Aligned_cols=251 Identities=16% Similarity=0.115 Sum_probs=141.3
Q ss_pred ceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCc-----chhhcccchhhHhh-hCCceEEEeCCCCCC
Q 020741 25 QTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYH-----AAWCWAEHWLPFFA-DSGFDCYAVSLLGQG 98 (322)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~-----~~~~~~~~~~~~l~-~~g~~v~~~D~~G~G 98 (322)
.....+.......+..+.+.|. ........|.||++||+|- ....|+ .+...++ +.+..|+++|+|=--
T Consensus 61 v~~~dv~~~~~~~l~vRly~P~----~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~-~~~~~~a~~~~~vvvSVdYRLAP 135 (336)
T KOG1515|consen 61 VTSKDVTIDPFTNLPVRLYRPT----SSSSETKLPVLVYFHGGGFCLGSANSPAYD-SFCTRLAAELNCVVVSVDYRLAP 135 (336)
T ss_pred ceeeeeEecCCCCeEEEEEcCC----CCCcccCceEEEEEeCCccEeCCCCCchhH-HHHHHHHHHcCeEEEecCcccCC
Confidence 3345666667778888999877 2222257899999999752 244454 5666664 447899999999432
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHH-----HhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEecc
Q 020741 99 ESDAPPGTVAGSLQTHAGDVADFIQ-----KNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCS 172 (322)
Q Consensus 99 ~S~~~~~~~~~~~~~~~~dl~~~l~-----~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~ 172 (322)
+.. ....+++..+.+..+.+ ...+ ++++|+|-|.||.+|..+|.+..+++ ...+.+++.|++-|
T Consensus 136 Eh~-----~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~-----~~~~ki~g~ili~P 205 (336)
T KOG1515|consen 136 EHP-----FPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEK-----LSKPKIKGQILIYP 205 (336)
T ss_pred CCC-----CCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhcc-----CCCcceEEEEEEec
Confidence 222 23445555555544444 2345 78999999999999999998876542 23456999999998
Q ss_pred CCCCCCCcchhhh--hhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcC
Q 020741 173 VPPSGNSGLVWRY--LFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNAS 250 (322)
Q Consensus 173 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (322)
............. ....+.. .......+.......... ..+-...+..
T Consensus 206 ~~~~~~~~~~e~~~~~~~~~~~-----------------------------~~~~~~~~w~~~lP~~~~-~~~~p~~np~ 255 (336)
T KOG1515|consen 206 FFQGTDRTESEKQQNLNGSPEL-----------------------------ARPKIDKWWRLLLPNGKT-DLDHPFINPV 255 (336)
T ss_pred ccCCCCCCCHHHHHhhcCCcch-----------------------------hHHHHHHHHHHhCCCCCC-CcCCcccccc
Confidence 6433222211111 1111000 011111111110000000 0000000000
Q ss_pred --CCCCCCCCccc-cEEEEeeCCCCccCh--hhHHHHhhhc-CceeEEecCCcccceeccc----hhhhHHHHHHHHhhh
Q 020741 251 --LPVPSVPKSSI-KVLVLGAKDDFIVDA--QGLSETGSFY-GVLPVCVEGVAHDMMLDCS----WEKGASVILSWLDGL 320 (322)
Q Consensus 251 --~~~~~~~~~~~-Pvl~i~g~~D~~~~~--~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~----~~~~~~~i~~fl~~~ 320 (322)
..........+ |+|++.++.|.+... ..++++.+.- ..++..++++.|.++.-.+ ..++.+.+.+|+++.
T Consensus 256 ~~~~~~d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 256 GNSLAKDLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred ccccccCccccCCCceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 11112223344 599999999988753 2333342221 2667789999998876544 357778888888764
No 108
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.45 E-value=1.3e-12 Score=94.24 Aligned_cols=210 Identities=14% Similarity=0.086 Sum_probs=130.3
Q ss_pred EEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCC---CcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCC
Q 020741 29 SHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGS---YHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPG 105 (322)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~---~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~ 105 (322)
.+....|-+-.+..||+. ...+..||+||. .++..... ..+..+.++||+|..+++ +.+..
T Consensus 47 ~l~Yg~~g~q~VDIwg~~---------~~~klfIfIHGGYW~~g~rk~cl-siv~~a~~~gY~vasvgY---~l~~q--- 110 (270)
T KOG4627|consen 47 HLRYGEGGRQLVDIWGST---------NQAKLFIFIHGGYWQEGDRKMCL-SIVGPAVRRGYRVASVGY---NLCPQ--- 110 (270)
T ss_pred ccccCCCCceEEEEecCC---------CCccEEEEEecchhhcCchhccc-chhhhhhhcCeEEEEecc---CcCcc---
Confidence 333333336677889976 588999999996 23433333 355666678999999875 33322
Q ss_pred CCCCCHHHHHHHHHHHHHHhC---C--CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCc
Q 020741 106 TVAGSLQTHAGDVADFIQKNL---S--LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSG 180 (322)
Q Consensus 106 ~~~~~~~~~~~dl~~~l~~~~---~--~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~ 180 (322)
..++.+.+.++...++..+ . +.+.+-|||.|+.+++.+..+ ...|.|.+++++++....
T Consensus 111 --~htL~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R----------~r~prI~gl~l~~GvY~l---- 174 (270)
T KOG4627|consen 111 --VHTLEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMR----------QRSPRIWGLILLCGVYDL---- 174 (270)
T ss_pred --cccHHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHH----------hcCchHHHHHHHhhHhhH----
Confidence 2466666666665555333 3 567788999999999999988 568889999998874211
Q ss_pred chhhhhhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCcc
Q 020741 181 LVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSS 260 (322)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (322)
..+...-.... -.++.+..+.. .-....+..++
T Consensus 175 -----------------~EL~~te~g~d----------lgLt~~~ae~~--------------------Scdl~~~~~v~ 207 (270)
T KOG4627|consen 175 -----------------RELSNTESGND----------LGLTERNAESV--------------------SCDLWEYTDVT 207 (270)
T ss_pred -----------------HHHhCCccccc----------cCcccchhhhc--------------------CccHHHhcCce
Confidence 00000000000 00011110000 00011124688
Q ss_pred ccEEEEeeCCCCccChhhHHHHhhhcC-ceeEEecCCcccceeccc---hhhhHHHHHHHH
Q 020741 261 IKVLVLGAKDDFIVDAQGLSETGSFYG-VLPVCVEGVAHDMMLDCS---WEKGASVILSWL 317 (322)
Q Consensus 261 ~Pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~---~~~~~~~i~~fl 317 (322)
+|+|++.|.+|..--.+..+.+....+ +.+..+++.+|+-..++. -..+...+.+|+
T Consensus 208 ~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 208 VWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIEETAIDDSDVSRFLRNIE 268 (270)
T ss_pred eeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHHHhccccchHHHHHHHHh
Confidence 999999999998777788888888775 899999999999776653 123444444443
No 109
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.44 E-value=1.8e-11 Score=90.74 Aligned_cols=181 Identities=19% Similarity=0.309 Sum_probs=106.5
Q ss_pred EEEEcCCCcchhhccc-chhhHhhhCC--ceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEech
Q 020741 61 LVFVHGSYHAAWCWAE-HWLPFFADSG--FDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLPPVLLGHSF 137 (322)
Q Consensus 61 vl~~HG~~~~~~~~~~-~~~~~l~~~g--~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~lvG~S~ 137 (322)
||++||+.++..+... .+.+.+.+.+ ..+.++|++ .......+.+.++|++..+..+.|+|.|+
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-------------~~p~~a~~~l~~~i~~~~~~~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-------------PFPEEAIAQLEQLIEELKPENVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-------------cCHHHHHHHHHHHHHhCCCCCeEEEEECh
Confidence 7999999888776542 2344565544 456777765 46778888899999944446799999999
Q ss_pred hHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCcchhhhhhccchhhhHHHHHHhHhhhccc-cccccccc
Q 020741 138 GGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTD-LSLCKETF 216 (322)
Q Consensus 138 Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 216 (322)
||..|..+|.+ ++ +++ |+++|+.... . .+...+... ...+...+
T Consensus 69 GG~~A~~La~~------------~~-~~a-vLiNPav~p~-----------------~----~l~~~iG~~~~~~~~e~~ 113 (187)
T PF05728_consen 69 GGFYATYLAER------------YG-LPA-VLINPAVRPY-----------------E----LLQDYIGEQTNPYTGESY 113 (187)
T ss_pred HHHHHHHHHHH------------hC-CCE-EEEcCCCCHH-----------------H----HHHHhhCccccCCCCccc
Confidence 99999999966 32 334 8888753210 0 001111100 00000000
Q ss_pred cCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcCceeEEecCC
Q 020741 217 FSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYGVLPVCVEGV 296 (322)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (322)
.+........ ..+.. . ......+++++.++.|.+++.+.+....+ ++..++.+|+
T Consensus 114 ---~~~~~~~~~l---------------~~l~~----~-~~~~~~~~lvll~~~DEvLd~~~a~~~~~--~~~~~i~~gg 168 (187)
T PF05728_consen 114 ---ELTEEHIEEL---------------KALEV----P-YPTNPERYLVLLQTGDEVLDYREAVAKYR--GCAQIIEEGG 168 (187)
T ss_pred ---eechHhhhhc---------------ceEec----c-ccCCCccEEEEEecCCcccCHHHHHHHhc--CceEEEEeCC
Confidence 0011111100 00000 0 02345699999999999999855443332 4555566788
Q ss_pred cccceeccchhhhHHHHHHHH
Q 020741 297 AHDMMLDCSWEKGASVILSWL 317 (322)
Q Consensus 297 gH~~~~~~~~~~~~~~i~~fl 317 (322)
+|-+.- = ++....|.+|+
T Consensus 169 dH~f~~--f-~~~l~~i~~f~ 186 (187)
T PF05728_consen 169 DHSFQD--F-EEYLPQIIAFL 186 (187)
T ss_pred CCCCcc--H-HHHHHHHHHhh
Confidence 997642 2 67777888886
No 110
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.44 E-value=5.5e-12 Score=99.86 Aligned_cols=112 Identities=21% Similarity=0.320 Sum_probs=87.2
Q ss_pred CCcEEEEcCCCcchhhcccchhhHhhhC---CceEEEeCCCCCCCCCCCC----CCCCCCHHHHHHHHHHHHHHhC----
Q 020741 58 RPPLVFVHGSYHAAWCWAEHWLPFFADS---GFDCYAVSLLGQGESDAPP----GTVAGSLQTHAGDVADFIQKNL---- 126 (322)
Q Consensus 58 ~~~vl~~HG~~~~~~~~~~~~~~~l~~~---g~~v~~~D~~G~G~S~~~~----~~~~~~~~~~~~dl~~~l~~~~---- 126 (322)
+..+||++|.+|-...|. .+.+.|.+. .+.|+++.+.||-.+.... ....++++++++...++|++.+
T Consensus 2 ~~li~~IPGNPGlv~fY~-~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYE-EFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHHHHH-HHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc
Confidence 457999999999999886 777777643 6999999999998776651 2457899999998888887554
Q ss_pred -C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCC
Q 020741 127 -S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGN 178 (322)
Q Consensus 127 -~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~ 178 (322)
. .+++|+|||.|+.++++.+.+..+ ...+|.+++++.|......
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~--------~~~~V~~~~lLfPTi~~ia 126 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPD--------LKFRVKKVILLFPTIEDIA 126 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccc--------cCCceeEEEEeCCcccccc
Confidence 2 679999999999999999977210 0224999999998754433
No 111
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.43 E-value=6.7e-12 Score=97.46 Aligned_cols=208 Identities=19% Similarity=0.247 Sum_probs=118.0
Q ss_pred CCCCcEEEEcCCCcchhhcccchhhHhh-hCCc--e--EEEeCCCCC----CCCCC--CCC------CCC--CCHHHHHH
Q 020741 56 EKRPPLVFVHGSYHAAWCWAEHWLPFFA-DSGF--D--CYAVSLLGQ----GESDA--PPG------TVA--GSLQTHAG 116 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~~~~~~~l~-~~g~--~--v~~~D~~G~----G~S~~--~~~------~~~--~~~~~~~~ 116 (322)
....|.||+||++++...+. .++..+. +.|. . ++.++.-|. |.=.. ..+ ... .++...++
T Consensus 9 ~~~tPTifihG~~gt~~s~~-~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 9 QSTTPTIFIHGYGGTANSFN-HMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp -S-EEEEEE--TTGGCCCCH-HHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred cCCCcEEEECCCCCChhHHH-HHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 45678999999999999997 8899997 6553 2 333343332 22111 111 112 24666666
Q ss_pred HHHHHHH---HhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCcchhhhhhccchh
Q 020741 117 DVADFIQ---KNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSGLVWRYLFTKPIA 192 (322)
Q Consensus 117 dl~~~l~---~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 192 (322)
.+..+|. +..+ +++.+|||||||..++.++.....+ ...|.+.++|.|+++.............
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~------~~~P~l~K~V~Ia~pfng~~~~~~~~~~------ 155 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGND------KNLPKLNKLVTIAGPFNGILGMNDDQNQ------ 155 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTG------TTS-EEEEEEEES--TTTTTCCSC-TTT------
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccC------CCCcccceEEEeccccCccccccccchh------
Confidence 6665555 3456 8899999999999999999886554 3578899999999743221111000000
Q ss_pred hhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeC---
Q 020741 193 AFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAK--- 269 (322)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~--- 269 (322)
....... +......|...+... ... -.-++.||-|+|+
T Consensus 156 ---------------------~~~~~~g-p~~~~~~y~~l~~~~-----------~~~------~p~~i~VLnI~G~~~~ 196 (255)
T PF06028_consen 156 ---------------------NDLNKNG-PKSMTPMYQDLLKNR-----------RKN------FPKNIQVLNIYGDLED 196 (255)
T ss_dssp ---------------------T-CSTT--BSS--HHHHHHHHTH-----------GGG------STTT-EEEEEEEESBT
T ss_pred ---------------------hhhcccC-CcccCHHHHHHHHHH-----------Hhh------CCCCeEEEEEecccCC
Confidence 0000000 111112222221110 000 1246789999998
Q ss_pred ---CCCccChhhHHHHhhhcC-----ceeEEecC--CcccceeccchhhhHHHHHHHH
Q 020741 270 ---DDFIVDAQGLSETGSFYG-----VLPVCVEG--VAHDMMLDCSWEKGASVILSWL 317 (322)
Q Consensus 270 ---~D~~~~~~~~~~~~~~~~-----~~~~~~~~--~gH~~~~~~~~~~~~~~i~~fl 317 (322)
.|..||...+..+...+. .+-.++.| +.|.-..+++ ++.+.|.+||
T Consensus 197 g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~--~V~~~I~~FL 252 (255)
T PF06028_consen 197 GSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP--QVDKLIIQFL 252 (255)
T ss_dssp TCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH--HHHHHHHHHH
T ss_pred CCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH--HHHHHHHHHh
Confidence 799999888777766663 44455554 6898888765 8999999998
No 112
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.40 E-value=1.6e-11 Score=85.02 Aligned_cols=184 Identities=17% Similarity=0.189 Sum_probs=119.7
Q ss_pred CCCCcEEEEcCCCcchhhcc-cchhhHhhhCCceEEEeCCCCC-----CCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-C
Q 020741 56 EKRPPLVFVHGSYHAAWCWA-EHWLPFFADSGFDCYAVSLLGQ-----GESDAPPGTVAGSLQTHAGDVADFIQKNLS-L 128 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~-~~~~~~l~~~g~~v~~~D~~G~-----G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~ 128 (322)
+...+||+.||.+.+.++-. ...+..|+.+|+.|..|+++.. |.-.+++.. ..-...+...+.++-. .+. .
T Consensus 12 ~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~-~t~~~~~~~~~aql~~-~l~~g 89 (213)
T COG3571 12 PAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGS-GTLNPEYIVAIAQLRA-GLAEG 89 (213)
T ss_pred CCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCcc-ccCCHHHHHHHHHHHh-cccCC
Confidence 34557899999987655321 3578889999999999998754 322222221 1223345555555555 454 7
Q ss_pred CcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccC-CCCCCCcchhhhhhccchhhhHHHHHHhHhhhcc
Q 020741 129 PPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSV-PPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQT 207 (322)
Q Consensus 129 ~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (322)
++++-|+||||-++...+.+ ...| |.++++++-+ .+.+.+.
T Consensus 90 pLi~GGkSmGGR~aSmvade----------~~A~-i~~L~clgYPfhppGKPe--------------------------- 131 (213)
T COG3571 90 PLIIGGKSMGGRVASMVADE----------LQAP-IDGLVCLGYPFHPPGKPE--------------------------- 131 (213)
T ss_pred ceeeccccccchHHHHHHHh----------hcCC-cceEEEecCccCCCCCcc---------------------------
Confidence 99999999999999999976 2233 8899888732 1111110
Q ss_pred ccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcC
Q 020741 208 DLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG 287 (322)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~ 287 (322)
.. ..+.+..+++|+||.+|+.|++-..+......-.-.
T Consensus 132 ----------------~~--------------------------Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~y~ls~~ 169 (213)
T COG3571 132 ----------------QL--------------------------RTEHLTGLKTPTLITQGTRDEFGTRDEVAGYALSDP 169 (213)
T ss_pred ----------------cc--------------------------hhhhccCCCCCeEEeecccccccCHHHHHhhhcCCc
Confidence 00 011234689999999999999987766543332335
Q ss_pred ceeEEecCCcccceecc---------chhhhHHHHHHHHhhhc
Q 020741 288 VLPVCVEGVAHDMMLDC---------SWEKGASVILSWLDGLR 321 (322)
Q Consensus 288 ~~~~~~~~~gH~~~~~~---------~~~~~~~~i~~fl~~~~ 321 (322)
.++++++++.|.+---. .-...++.|..|+.++.
T Consensus 170 iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~l~ 212 (213)
T COG3571 170 IEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARRLA 212 (213)
T ss_pred eEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999764221 12455677888887654
No 113
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.40 E-value=2.2e-11 Score=109.59 Aligned_cols=221 Identities=13% Similarity=0.094 Sum_probs=113.4
Q ss_pred hhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----------------CCCCcEEEEechhHH
Q 020741 78 WLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKN-----------------LSLPPVLLGHSFGGL 140 (322)
Q Consensus 78 ~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~-----------------~~~~~~lvG~S~Gg~ 140 (322)
+.++|..+||.|+.+|.||.|.|++........-.+-..++++++... .+++|.++|.|+||.
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~ 350 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGT 350 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHH
Confidence 457888999999999999999999875421111222223344444411 136899999999999
Q ss_pred HHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCcchhh-hhhccc--hhh--hHHHHHHhHhhhcccccccccc
Q 020741 141 IIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSGLVWR-YLFTKP--IAA--FKVTRSLAAKAFQTDLSLCKET 215 (322)
Q Consensus 141 ~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~~~~~-~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~ 215 (322)
+++.+|.. ..|.++++|..++...... .... .....+ ... ........ ...... ...
T Consensus 351 ~~~~aAa~-----------~pp~LkAIVp~a~is~~yd--~yr~~G~~~~~~g~~ged~d~l~~~~---~~r~~~--~~~ 412 (767)
T PRK05371 351 LPNAVATT-----------GVEGLETIIPEAAISSWYD--YYRENGLVRAPGGYQGEDLDVLAELT---YSRNLL--AGD 412 (767)
T ss_pred HHHHHHhh-----------CCCcceEEEeeCCCCcHHH--HhhcCCceeccCCcCCcchhhHHHHh---hhcccC--cch
Confidence 99998854 2445999998776532100 0000 000000 000 00000000 000000 000
Q ss_pred ccCCccchHHHHHHHHHHhhcCCCcccch-hhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhc-----Cce
Q 020741 216 FFSSSMEDHLVLRYQELMKESSRMPLFDL-RKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFY-----GVL 289 (322)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~-----~~~ 289 (322)
+.. .......+...+..........+ .-+........+.++++|+|+++|..|..++++.+.++.+.+ +.+
T Consensus 413 ~~~---~~~~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkk 489 (767)
T PRK05371 413 YLR---HNEACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKK 489 (767)
T ss_pred hhc---chHHHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeE
Confidence 000 00111111000000000000001 111222333445689999999999999999987776665554 256
Q ss_pred eEEecCCcccceeccchhhhHHHHHHHHhhh
Q 020741 290 PVCVEGVAHDMMLDCSWEKGASVILSWLDGL 320 (322)
Q Consensus 290 ~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 320 (322)
+.+.+ .+|.........++.+.+.+|++..
T Consensus 490 L~l~~-g~H~~~~~~~~~d~~e~~~~Wfd~~ 519 (767)
T PRK05371 490 LFLHQ-GGHVYPNNWQSIDFRDTMNAWFTHK 519 (767)
T ss_pred EEEeC-CCccCCCchhHHHHHHHHHHHHHhc
Confidence 65555 5896544333367778888888653
No 114
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.38 E-value=6.9e-12 Score=96.21 Aligned_cols=174 Identities=18% Similarity=0.216 Sum_probs=87.7
Q ss_pred CCCcEEEEcCCCcchhhccc---chhhHhhhCCceEEEeCCCCC-----CCCCC----------CCC-------C----C
Q 020741 57 KRPPLVFVHGSYHAAWCWAE---HWLPFFADSGFDCYAVSLLGQ-----GESDA----------PPG-------T----V 107 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~---~~~~~l~~~g~~v~~~D~~G~-----G~S~~----------~~~-------~----~ 107 (322)
.++.|||+||++.+...+.. .+.+.|.+.++.++.+|-|-- |-... ... . .
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 57889999999999998862 234455542689988885521 11110 000 0 1
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCcchhhhhh
Q 020741 108 AGSLQTHAGDVADFIQKNLSLPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSGLVWRYLF 187 (322)
Q Consensus 108 ~~~~~~~~~dl~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~~~~~~~~ 187 (322)
...+++..+.+.+++++ .+.=..|+|+|.||.+|..++......... ...|.++-+|++++..+....
T Consensus 83 ~~~~~~sl~~l~~~i~~-~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~---~~~~~~kf~V~~sg~~p~~~~-------- 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEE-NGPFDGVLGFSQGAALAALLLALQQRGRPD---GAHPPFKFAVFISGFPPPDPD-------- 150 (212)
T ss_dssp G---HHHHHHHHHHHHH-H---SEEEEETHHHHHHHHHHHHHHHHST-----T----SEEEEES----EEE---------
T ss_pred ccCHHHHHHHHHHHHHh-cCCeEEEEeecHHHHHHHHHHHHHHhhccc---ccCCCceEEEEEcccCCCchh--------
Confidence 22345555566666652 223357999999999999998765432100 024568888888874321000
Q ss_pred ccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEe
Q 020741 188 TKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLG 267 (322)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~ 267 (322)
+.... ...++++|+|.|+
T Consensus 151 --------------------------------------------------------~~~~~------~~~~i~iPtlHv~ 168 (212)
T PF03959_consen 151 --------------------------------------------------------YQELY------DEPKISIPTLHVI 168 (212)
T ss_dssp --------------------------------------------------------GTTTT--------TT---EEEEEE
T ss_pred --------------------------------------------------------hhhhh------ccccCCCCeEEEE
Confidence 00000 1246899999999
Q ss_pred eCCCCccChhhHHHHhhhc-C-ceeEEecCCcccceeccc
Q 020741 268 AKDDFIVDAQGLSETGSFY-G-VLPVCVEGVAHDMMLDCS 305 (322)
Q Consensus 268 g~~D~~~~~~~~~~~~~~~-~-~~~~~~~~~gH~~~~~~~ 305 (322)
|.+|.+++++.++.+.+.+ + .+++..++ ||.+.....
T Consensus 169 G~~D~~~~~~~s~~L~~~~~~~~~v~~h~g-GH~vP~~~~ 207 (212)
T PF03959_consen 169 GENDPVVPPERSEALAEMFDPDARVIEHDG-GHHVPRKKE 207 (212)
T ss_dssp ETT-SSS-HHHHHHHHHHHHHHEEEEEESS-SSS----HH
T ss_pred eCCCCCcchHHHHHHHHhccCCcEEEEECC-CCcCcCChh
Confidence 9999999999888888887 4 66666665 998876543
No 115
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.37 E-value=1.1e-11 Score=90.99 Aligned_cols=176 Identities=13% Similarity=0.141 Sum_probs=115.9
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCC-CCCCCCCCCC------CCCCCHHHHHHHHH---HHHHHhC
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLL-GQGESDAPPG------TVAGSLQTHAGDVA---DFIQKNL 126 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~-G~G~S~~~~~------~~~~~~~~~~~dl~---~~l~~~~ 126 (322)
++..||++--+.+....-....++.++..||.|+.+|+. |--.|..... ....+.....+++. ++|+.+.
T Consensus 38 ~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g 117 (242)
T KOG3043|consen 38 SKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHG 117 (242)
T ss_pred CCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcC
Confidence 445677777654444332235788888899999999975 3111211111 11123333334444 4444333
Q ss_pred C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCcchhhhhhccchhhhHHHHHHhHhhh
Q 020741 127 S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAF 205 (322)
Q Consensus 127 ~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (322)
. .+|.++|.+|||.++..+. ...|++.+.+.+-+...
T Consensus 118 ~~kkIGv~GfCwGak~vv~~~------------~~~~~f~a~v~~hps~~------------------------------ 155 (242)
T KOG3043|consen 118 DSKKIGVVGFCWGAKVVVTLS------------AKDPEFDAGVSFHPSFV------------------------------ 155 (242)
T ss_pred CcceeeEEEEeecceEEEEee------------ccchhheeeeEecCCcC------------------------------
Confidence 3 7899999999999999888 34777777777654210
Q ss_pred ccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhh
Q 020741 206 QTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSF 285 (322)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~ 285 (322)
+.+ +...+++|+|++.|+.|.++|++....+.+.
T Consensus 156 ----------------d~~------------------------------D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~ 189 (242)
T KOG3043|consen 156 ----------------DSA------------------------------DIANVKAPILFLFAELDEDVPPKDVKAWEEK 189 (242)
T ss_pred ----------------Chh------------------------------HHhcCCCCEEEEeecccccCCHHHHHHHHHH
Confidence 101 1136889999999999999999988888777
Q ss_pred cC------ceeEEecCCccccee-----ccc-----hhhhHHHHHHHHhhh
Q 020741 286 YG------VLPVCVEGVAHDMML-----DCS-----WEKGASVILSWLDGL 320 (322)
Q Consensus 286 ~~------~~~~~~~~~gH~~~~-----~~~-----~~~~~~~i~~fl~~~ 320 (322)
+. .++.+++|.+|.... +.| .++..+.+.+|++..
T Consensus 190 lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 190 LKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred HhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 63 479999999998774 222 467788888998764
No 116
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.37 E-value=8.6e-11 Score=90.99 Aligned_cols=103 Identities=27% Similarity=0.367 Sum_probs=88.4
Q ss_pred CcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEech
Q 020741 59 PPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LPPVLLGHSF 137 (322)
Q Consensus 59 ~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~ 137 (322)
|+++++|+.++...+|. .+...|... ..|+..+.||.|.-... ..+++++++...+.|.+.-+ .+++|+|||+
T Consensus 1 ~pLF~fhp~~G~~~~~~-~L~~~l~~~-~~v~~l~a~g~~~~~~~----~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~ 74 (257)
T COG3319 1 PPLFCFHPAGGSVLAYA-PLAAALGPL-LPVYGLQAPGYGAGEQP----FASLDDMAAAYVAAIRRVQPEGPYVLLGWSL 74 (257)
T ss_pred CCEEEEcCCCCcHHHHH-HHHHHhccC-ceeeccccCcccccccc----cCCHHHHHHHHHHHHHHhCCCCCEEEEeecc
Confidence 57999999999999997 899999877 99999999999873333 35899999999998886666 9999999999
Q ss_pred hHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCC
Q 020741 138 GGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPP 175 (322)
Q Consensus 138 Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~ 175 (322)
||.+|...|.++... --.|..++++++.++
T Consensus 75 GG~vA~evA~qL~~~--------G~~Va~L~llD~~~~ 104 (257)
T COG3319 75 GGAVAFEVAAQLEAQ--------GEEVAFLGLLDAVPP 104 (257)
T ss_pred ccHHHHHHHHHHHhC--------CCeEEEEEEeccCCC
Confidence 999999999987653 223999999999776
No 117
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.36 E-value=3e-11 Score=93.30 Aligned_cols=97 Identities=23% Similarity=0.329 Sum_probs=62.2
Q ss_pred EEEEcCCC---cchhhcccchhhHhhh-CCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH---Hh-----CC-
Q 020741 61 LVFVHGSY---HAAWCWAEHWLPFFAD-SGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQ---KN-----LS- 127 (322)
Q Consensus 61 vl~~HG~~---~~~~~~~~~~~~~l~~-~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~---~~-----~~- 127 (322)
||++||.+ ++..... .+...+++ .|+.|+.+|+|=. + ...+.+..+|+.+.++ +. .+
T Consensus 1 v~~~HGGg~~~g~~~~~~-~~~~~la~~~g~~v~~~~Yrl~-----p----~~~~p~~~~D~~~a~~~l~~~~~~~~~d~ 70 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHW-PFAARLAAERGFVVVSIDYRLA-----P----EAPFPAALEDVKAAYRWLLKNADKLGIDP 70 (211)
T ss_dssp EEEE--STTTSCGTTTHH-HHHHHHHHHHTSEEEEEE---T-----T----TSSTTHHHHHHHHHHHHHHHTHHHHTEEE
T ss_pred CEEECCcccccCChHHHH-HHHHHHHhhccEEEEEeecccc-----c----cccccccccccccceeeeccccccccccc
Confidence 79999975 3333332 45666665 7999999999932 1 1234445555444433 13 33
Q ss_pred CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCC
Q 020741 128 LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVP 174 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~ 174 (322)
++|+|+|+|.||.+++.++....+. ..+.++++++++|..
T Consensus 71 ~~i~l~G~SAGg~la~~~~~~~~~~-------~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 71 ERIVLIGDSAGGHLALSLALRARDR-------GLPKPKGIILISPWT 110 (211)
T ss_dssp EEEEEEEETHHHHHHHHHHHHHHHT-------TTCHESEEEEESCHS
T ss_pred cceEEeecccccchhhhhhhhhhhh-------cccchhhhhcccccc
Confidence 7899999999999999999876553 145599999999853
No 118
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.36 E-value=5.4e-11 Score=115.81 Aligned_cols=103 Identities=23% Similarity=0.265 Sum_probs=85.3
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEe
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LPPVLLGH 135 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~ 135 (322)
++++++++||++++...|. .+.+.|... ++|+++|.+|+|.+.. . .++++++++++.+.++.... .+++++||
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~-~l~~~l~~~-~~v~~~~~~g~~~~~~--~--~~~l~~la~~~~~~i~~~~~~~p~~l~G~ 1140 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFS-VLSRYLDPQ-WSIYGIQSPRPDGPMQ--T--ATSLDEVCEAHLATLLEQQPHGPYHLLGY 1140 (1296)
T ss_pred CCCCeEEecCCCCchHHHH-HHHHhcCCC-CcEEEEECCCCCCCCC--C--CCCHHHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 4578999999999999997 888888664 9999999999986532 2 47999999999999985444 68999999
Q ss_pred chhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCC
Q 020741 136 SFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVP 174 (322)
Q Consensus 136 S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~ 174 (322)
|+||.++..+|.++.+ .+. +..++++++.+
T Consensus 1141 S~Gg~vA~e~A~~l~~---------~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1141 SLGGTLAQGIAARLRA---------RGEEVAFLGLLDTWP 1171 (1296)
T ss_pred chhhHHHHHHHHHHHH---------cCCceeEEEEecCCC
Confidence 9999999999987543 344 88999888754
No 119
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.35 E-value=7.5e-10 Score=94.49 Aligned_cols=138 Identities=17% Similarity=0.110 Sum_probs=93.9
Q ss_pred eeEEEeCCC---CceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchh-----------hH-------hhh
Q 020741 26 TRVSHQLPS---GLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWL-----------PF-------FAD 84 (322)
Q Consensus 26 ~~~~~~~~~---g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~-----------~~-------l~~ 84 (322)
...++.+.+ +..++|+.+... ....+.|+||+++|.++++..+. .+. .. ..+
T Consensus 48 ~sGy~~v~~~~~~~~lFyw~~~s~------~~~~~~Pl~lwlnGGPG~ss~~G-~f~E~GP~~i~~~~~~~~~n~~sW~~ 120 (462)
T PTZ00472 48 WSGYFDIPGNQTDKHYFYWAFGPR------NGNPEAPVLLWMTGGPGCSSMFA-LLAENGPCLMNETTGDIYNNTYSWNN 120 (462)
T ss_pred eeEEEEeCCCCCCceEEEEEEEcC------CCCCCCCEEEEECCCCcHHHHHh-hhccCCCeEEeCCCCceeECCccccc
Confidence 446677743 678999999854 33457899999999988776542 111 01 112
Q ss_pred CCceEEEeCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CC-CCcEEEEechhHHHHHHHHHHHhhhhhcc
Q 020741 85 SGFDCYAVSLL-GQGESDAPPGTVAGSLQTHAGDVADFIQKN------LS-LPPVLLGHSFGGLIIQYYIARIRNEKMLE 156 (322)
Q Consensus 85 ~g~~v~~~D~~-G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~------~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~ 156 (322)
. ..++.+|.| |+|.|.........+.++.++|+.++++.. +. .+++|+|||+||.++..+|.++.+....
T Consensus 121 ~-~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~- 198 (462)
T PTZ00472 121 E-AYVIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKK- 198 (462)
T ss_pred c-cCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccc-
Confidence 2 689999975 888887654423456678899998888843 23 7899999999999999999876432100
Q ss_pred ccCCCC--CcceEEEeccCC
Q 020741 157 METPYP--EIAGAVLVCSVP 174 (322)
Q Consensus 157 ~~~~~p--~v~~~vl~~~~~ 174 (322)
...+ +++++++-++..
T Consensus 199 --~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 199 --GDGLYINLAGLAVGNGLT 216 (462)
T ss_pred --cCCceeeeEEEEEecccc
Confidence 0012 378888888753
No 120
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.34 E-value=3.2e-10 Score=92.91 Aligned_cols=128 Identities=17% Similarity=0.140 Sum_probs=81.4
Q ss_pred CCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCC---cchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCC
Q 020741 32 LPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSY---HAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVA 108 (322)
Q Consensus 32 ~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~---~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~ 108 (322)
..++..+.++.+.|. .......|+||++||.+ ++.......+...+...|+.|+.+|+|-.-+-. ..
T Consensus 58 ~~~~~~~~~~~y~p~-----~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~-----~p 127 (312)
T COG0657 58 GPSGDGVPVRVYRPD-----RKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHP-----FP 127 (312)
T ss_pred CCCCCceeEEEECCC-----CCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCC-----CC
Confidence 334545667777751 12334689999999975 444444324455566689999999999432221 22
Q ss_pred CCHHHHHHHHHHHHHHh--C--C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCC
Q 020741 109 GSLQTHAGDVADFIQKN--L--S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPS 176 (322)
Q Consensus 109 ~~~~~~~~dl~~~l~~~--~--~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~ 176 (322)
..+++..+.+..+.++. + + ++|.++|+|.||.+++.++...++++ .|.....+++.+....
T Consensus 128 ~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~-------~~~p~~~~li~P~~d~ 193 (312)
T COG0657 128 AALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRG-------LPLPAAQVLISPLLDL 193 (312)
T ss_pred chHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcC-------CCCceEEEEEecccCC
Confidence 34444333333333321 2 2 78999999999999999998765432 4567888898886433
No 121
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.34 E-value=2.6e-11 Score=93.18 Aligned_cols=110 Identities=20% Similarity=0.211 Sum_probs=73.4
Q ss_pred CCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC------C-C
Q 020741 56 EKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNL------S-L 128 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~------~-~ 128 (322)
..-|+|||+||+......| ..+.+.++..||-|+.+|+...+....... .....+.++++.+-++..+ + .
T Consensus 15 g~yPVv~f~~G~~~~~s~Y-s~ll~hvAShGyIVV~~d~~~~~~~~~~~~--~~~~~~vi~Wl~~~L~~~l~~~v~~D~s 91 (259)
T PF12740_consen 15 GTYPVVLFLHGFLLINSWY-SQLLEHVASHGYIVVAPDLYSIGGPDDTDE--VASAAEVIDWLAKGLESKLPLGVKPDFS 91 (259)
T ss_pred CCcCEEEEeCCcCCCHHHH-HHHHHHHHhCceEEEEecccccCCCCcchh--HHHHHHHHHHHHhcchhhcccccccccc
Confidence 4679999999998555555 489999999999999999766443211111 1233333344333333232 3 5
Q ss_pred CcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCC
Q 020741 129 PPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVP 174 (322)
Q Consensus 129 ~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~ 174 (322)
++.|.|||-||-++..++....+. .....++++++++|+.
T Consensus 92 ~l~l~GHSrGGk~Af~~al~~~~~------~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 92 KLALAGHSRGGKVAFAMALGNASS------SLDLRFSALILLDPVD 131 (259)
T ss_pred ceEEeeeCCCCHHHHHHHhhhccc------ccccceeEEEEecccc
Confidence 789999999999999999663211 0123489999999863
No 122
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.33 E-value=1.4e-10 Score=104.22 Aligned_cols=232 Identities=14% Similarity=0.084 Sum_probs=147.9
Q ss_pred CCceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchh---hcccchhhH-hhhCCceEEEeCCCCCC
Q 020741 23 QGQTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAW---CWAEHWLPF-FADSGFDCYAVSLLGQG 98 (322)
Q Consensus 23 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~---~~~~~~~~~-l~~~g~~v~~~D~~G~G 98 (322)
+..+...+.. ||.+..+....|+ .....+.-|.+|.+||.+++.. .|.-.+... ....|+.|+.+|.||-|
T Consensus 496 p~~~~~~i~~-~~~~~~~~~~lP~----~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~ 570 (755)
T KOG2100|consen 496 PIVEFGKIEI-DGITANAILILPP----NFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSG 570 (755)
T ss_pred CcceeEEEEe-ccEEEEEEEecCC----CCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcC
Confidence 3345556666 9999999999986 2344456688888999886322 122123344 55679999999999987
Q ss_pred CCCCCCC------CCCCCHHHHHHHHHHHHHHhC-C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCC-C-cceEE
Q 020741 99 ESDAPPG------TVAGSLQTHAGDVADFIQKNL-S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYP-E-IAGAV 168 (322)
Q Consensus 99 ~S~~~~~------~~~~~~~~~~~dl~~~l~~~~-~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p-~-v~~~v 168 (322)
.....-. -.....+++...+..+++... + +++.++|+|+||.+++.+++. .| + ++..+
T Consensus 571 ~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~------------~~~~~fkcgv 638 (755)
T KOG2100|consen 571 GYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLES------------DPGDVFKCGV 638 (755)
T ss_pred CcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhh------------CcCceEEEEE
Confidence 7654421 123456666666666666332 4 789999999999999999954 76 4 55558
Q ss_pred EeccCCCCCCCcchhhhhhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhh
Q 020741 169 LVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLN 248 (322)
Q Consensus 169 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (322)
.++|+.......... ...+... +.+....|.
T Consensus 639 avaPVtd~~~yds~~-----------------------------terymg~--p~~~~~~y~------------------ 669 (755)
T KOG2100|consen 639 AVAPVTDWLYYDSTY-----------------------------TERYMGL--PSENDKGYE------------------ 669 (755)
T ss_pred Eecceeeeeeecccc-----------------------------cHhhcCC--Cccccchhh------------------
Confidence 888864221100000 0000000 000000011
Q ss_pred cCCCCCCCCCccccE-EEEeeCCCCccChhhHHHHhhhcC-----ceeEEecCCcccceeccchhhhHHHHHHHHhhh
Q 020741 249 ASLPVPSVPKSSIKV-LVLGAKDDFIVDAQGLSETGSFYG-----VLPVCVEGVAHDMMLDCSWEKGASVILSWLDGL 320 (322)
Q Consensus 249 ~~~~~~~~~~~~~Pv-l~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 320 (322)
.......+..++.|. |++||+.|.-++.+.+..+.+.+. .+..++|+.+|.+..-.....+...+..|+..+
T Consensus 670 e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~ 747 (755)
T KOG2100|consen 670 ESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDC 747 (755)
T ss_pred hccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHHHHHH
Confidence 111222233555565 999999999999888888877662 889999999999877554367888888898754
No 123
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.33 E-value=4.3e-11 Score=96.50 Aligned_cols=105 Identities=18% Similarity=0.240 Sum_probs=76.9
Q ss_pred CCCcEEEEcCCCcchhhcc----cchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHH-HHHHHHHH---HhCC-
Q 020741 57 KRPPLVFVHGSYHAAWCWA----EHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHA-GDVADFIQ---KNLS- 127 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~----~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~-~dl~~~l~---~~~~- 127 (322)
-++++|++|.+-.....|+ ..++..|.++|+.|+.+++++-..+.. ..++++++ +.+.+.++ ...+
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~-----~~~~edYi~e~l~~aid~v~~itg~ 180 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA-----AKNLEDYILEGLSEAIDTVKDITGQ 180 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh-----hccHHHHHHHHHHHHHHHHHHHhCc
Confidence 5789999999877766665 457889999999999999997666655 24566666 44433333 2567
Q ss_pred CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCC
Q 020741 128 LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPS 176 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~ 176 (322)
++|.++|+|.||++...+++.... .+|+.++++.+....
T Consensus 181 ~~InliGyCvGGtl~~~ala~~~~----------k~I~S~T~lts~~DF 219 (445)
T COG3243 181 KDINLIGYCVGGTLLAAALALMAA----------KRIKSLTLLTSPVDF 219 (445)
T ss_pred cccceeeEecchHHHHHHHHhhhh----------cccccceeeecchhh
Confidence 899999999999999888865221 138888888765443
No 124
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.27 E-value=7.7e-10 Score=88.14 Aligned_cols=234 Identities=15% Similarity=0.165 Sum_probs=124.3
Q ss_pred CCCCcEEEEcCCCcchhhcccch-hhHhhhCCceEEEeCCCCCCCCCCCCC--CCCCCHHHH----------HHHHHHHH
Q 020741 56 EKRPPLVFVHGSYHAAWCWAEHW-LPFFADSGFDCYAVSLLGQGESDAPPG--TVAGSLQTH----------AGDVADFI 122 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~~~~-~~~l~~~g~~v~~~D~~G~G~S~~~~~--~~~~~~~~~----------~~dl~~~l 122 (322)
+.+|.+|.+.|.|......+..+ +..|.+.|+..+.+..|-||.-.+... ....+..++ +..+..++
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 46888999999877554444444 777888899999999999987655443 111111111 12234445
Q ss_pred HHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCC-------Ccchhhhhhccchhh
Q 020741 123 QKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGN-------SGLVWRYLFTKPIAA 193 (322)
Q Consensus 123 ~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~-------~~~~~~~~~~~~~~~ 193 (322)
++. + .++.+.|.||||.+|...| ...|. +..+-++++...... ....|..+... ..
T Consensus 170 ~~~-G~~~~g~~G~SmGG~~A~laa------------~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q-~~- 234 (348)
T PF09752_consen 170 ERE-GYGPLGLTGISMGGHMAALAA------------SNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQ-FE- 234 (348)
T ss_pred Hhc-CCCceEEEEechhHhhHHhhh------------hcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHH-hc-
Confidence 533 7 8999999999999999998 45887 555555554322111 01111111111 00
Q ss_pred hHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCc
Q 020741 194 FKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFI 273 (322)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~ 273 (322)
..............................+.+......+..... +.+. ..+.-.-.+.++.+++|..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~--------l~nf----~~P~dp~~ii~V~A~~DaY 302 (348)
T PF09752_consen 235 DTVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTH--------LTNF----PVPVDPSAIIFVAAKNDAY 302 (348)
T ss_pred ccchhhhhcccccCcccccchhhccccchHHHHHHHHHHHHhhcc--------cccc----CCCCCCCcEEEEEecCceE
Confidence 000000000000000000000000011112222222211111111 0000 0112334678899999999
Q ss_pred cChhhHHHHhhhc-CceeEEecCCcccce-eccchhhhHHHHHHHHh
Q 020741 274 VDAQGLSETGSFY-GVLPVCVEGVAHDMM-LDCSWEKGASVILSWLD 318 (322)
Q Consensus 274 ~~~~~~~~~~~~~-~~~~~~~~~~gH~~~-~~~~~~~~~~~i~~fl~ 318 (322)
+|......+.+.. ++++..++| ||..- +-+. +.+.+.|.+=++
T Consensus 303 VPr~~v~~Lq~~WPGsEvR~l~g-GHVsA~L~~q-~~fR~AI~Daf~ 347 (348)
T PF09752_consen 303 VPRHGVLSLQEIWPGSEVRYLPG-GHVSAYLLHQ-EAFRQAIYDAFE 347 (348)
T ss_pred echhhcchHHHhCCCCeEEEecC-CcEEEeeech-HHHHHHHHHHhh
Confidence 9998888888887 599999997 99744 3344 778888877654
No 125
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.26 E-value=9.6e-11 Score=89.73 Aligned_cols=52 Identities=15% Similarity=0.252 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHhCC---CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCC
Q 020741 113 THAGDVADFIQKNLS---LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPS 176 (322)
Q Consensus 113 ~~~~dl~~~l~~~~~---~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~ 176 (322)
++.++..++|.++-. ++|.|+|.|.||-+|+.+|.. +|+|+++|.+++....
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~------------~~~i~avVa~~ps~~~ 58 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASR------------FPQISAVVAISPSSVV 58 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHH------------SSSEEEEEEES--SB-
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhc------------CCCccEEEEeCCceeE
Confidence 456777777774422 689999999999999999966 8899999999986533
No 126
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.24 E-value=2.6e-10 Score=85.11 Aligned_cols=261 Identities=13% Similarity=0.112 Sum_probs=144.0
Q ss_pred CCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhC-C--ceEEEeCCCCCCCCC---CCCC--
Q 020741 34 SGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADS-G--FDCYAVSLLGQGESD---APPG-- 105 (322)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~-g--~~v~~~D~~G~G~S~---~~~~-- 105 (322)
+|..++...+++.. ......++.++++.|.+|....|. .++..|... + +.++.+-..||-.-+ ....
T Consensus 9 ~gl~~si~~~~~~v----~~~~~~~~li~~IpGNPG~~gFY~-~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~ 83 (301)
T KOG3975|consen 9 SGLPTSILTLKPWV----TKSGEDKPLIVWIPGNPGLLGFYT-EFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSH 83 (301)
T ss_pred cCCcccceeeeeee----ccCCCCceEEEEecCCCCchhHHH-HHHHHHHHhcccccceeEEeccccccCCccccccccc
Confidence 55555555555431 111247788999999999998887 677766543 1 568888888876443 1111
Q ss_pred --CCCCCHHHHHHHHHHHHHHhCC--CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCcc
Q 020741 106 --TVAGSLQTHAGDVADFIQKNLS--LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSGL 181 (322)
Q Consensus 106 --~~~~~~~~~~~dl~~~l~~~~~--~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~~ 181 (322)
...++++++++.-.++++++++ .+++++|||-|+++.+......+ ..-.|.+++++-|..-....+.
T Consensus 84 ~~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k---------~~~~vqKa~~LFPTIerM~eSp 154 (301)
T KOG3975|consen 84 TNEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIK---------LVFSVQKAVLLFPTIERMHESP 154 (301)
T ss_pred ccccccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcc---------cccceEEEEEecchHHHHhcCC
Confidence 2457899999999999998887 78999999999999999995311 1112788888776421111110
Q ss_pred hhh----hhhccc-------hhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHH-----hhcCCCcccchh
Q 020741 182 VWR----YLFTKP-------IAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELM-----KESSRMPLFDLR 245 (322)
Q Consensus 182 ~~~----~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 245 (322)
.-. .+...+ ..-+..........+. +..+.....+++.+....... ..........+.
T Consensus 155 nG~~~t~~l~~~~hv~~lt~yi~~~~lp~~ir~~Li------~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~ 228 (301)
T KOG3975|consen 155 NGIRLTKVLRYLPHVVSLTSYIYWILLPGFIRFILI------KFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEME 228 (301)
T ss_pred CceEeeeeeeeehhhhheeeeeeeecChHHHHHHHH------HHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHH
Confidence 000 000000 0000000000000000 000001111222221100000 000000000111
Q ss_pred hhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcC---ceeEEecCCcccceeccchhhhHHHHHHHH
Q 020741 246 KLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG---VLPVCVEGVAHDMMLDCSWEKGASVILSWL 317 (322)
Q Consensus 246 ~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 317 (322)
.... ...+.+.+..+-+-+.+|..|..||.+....+.+.++ .++-+ ++..|.+..... +..++.+.+.+
T Consensus 229 eV~~-~d~e~~een~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~-q~ma~~v~d~~ 300 (301)
T KOG3975|consen 229 EVTT-RDIEYCEENLDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHA-QYMANAVFDMI 300 (301)
T ss_pred HHHH-hHHHHHHhcCcEEEEEccCCCCCcchHHHHHHhhhcchhceeecc-ccCCcceeeccc-HHHHHHHHHhh
Confidence 1110 0011123445678899999999999999999988886 44444 679999888887 88888887765
No 127
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.23 E-value=4.9e-10 Score=94.46 Aligned_cols=231 Identities=15% Similarity=0.086 Sum_probs=141.5
Q ss_pred EEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcc-----hhhcccc-hhhHhhhCCceEEEeCCCCCCCCC
Q 020741 28 VSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHA-----AWCWAEH-WLPFFADSGFDCYAVSLLGQGESD 101 (322)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~-----~~~~~~~-~~~~l~~~g~~v~~~D~~G~G~S~ 101 (322)
..+....|.+++...+.|.+ ...+++-|+++++-|.++- ...|... -...|+..||.|+.+|-||.-.-.
T Consensus 616 f~fqs~tg~~lYgmiyKPhn----~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRG 691 (867)
T KOG2281|consen 616 FSFQSKTGLTLYGMIYKPHN----FQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRG 691 (867)
T ss_pred eeeecCCCcEEEEEEEcccc----CCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccc
Confidence 44567789999999999872 3344567999999998753 2222211 134678899999999999864332
Q ss_pred CCCC------CCCCCHHHHHHHHHHHHHHh--CC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEecc
Q 020741 102 APPG------TVAGSLQTHAGDVADFIQKN--LS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCS 172 (322)
Q Consensus 102 ~~~~------~~~~~~~~~~~dl~~~l~~~--~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~ 172 (322)
..-. -....+++.++-+.-+.++. .+ ++|.+-|+|+||.+++.... ++|+|-++.+.++
T Consensus 692 lkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~------------~~P~IfrvAIAGa 759 (867)
T KOG2281|consen 692 LKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLA------------QYPNIFRVAIAGA 759 (867)
T ss_pred hhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhh------------cCcceeeEEeccC
Confidence 2211 22356778888887777733 24 88999999999999999994 4999666555443
Q ss_pred CCCCCCCcchhhhhhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCC
Q 020741 173 VPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLP 252 (322)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (322)
+.... .... ....+.+..-.-.++ ..|.. ..... .
T Consensus 760 pVT~W------~~YD----------------------TgYTERYMg~P~~nE--~gY~a----------gSV~~-----~ 794 (867)
T KOG2281|consen 760 PVTDW------RLYD----------------------TGYTERYMGYPDNNE--HGYGA----------GSVAG-----H 794 (867)
T ss_pred cceee------eeec----------------------ccchhhhcCCCccch--hcccc----------hhHHH-----H
Confidence 21110 0000 000000000000000 00000 00000 0
Q ss_pred CCCCCCccccEEEEeeCCCCccChhhHHHHhhhc-----CceeEEecCCcccceeccchhhhHHHHHHHHhh
Q 020741 253 VPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFY-----GVLPVCVEGVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 253 ~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
.+.++.-....|++||--|.-+.-.....+...+ +-+++++|+-.|.+-........-..+..||++
T Consensus 795 VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 795 VEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred HhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 1112233446799999999988876666655544 289999999999987655547777888899875
No 128
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.23 E-value=1.7e-10 Score=86.93 Aligned_cols=106 Identities=21% Similarity=0.186 Sum_probs=73.1
Q ss_pred CCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHhC------C-
Q 020741 56 EKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPG-TVAGSLQTHAGDVADFIQKNL------S- 127 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~-~~~~~~~~~~~dl~~~l~~~~------~- 127 (322)
..-|+|+|+||+.-....|. .+...++.+||-|+++++-..-. +.. .+..+....++++..-+++.+ +
T Consensus 44 G~yPVilF~HG~~l~ns~Ys-~lL~HIASHGfIVVAPQl~~~~~---p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl 119 (307)
T PF07224_consen 44 GTYPVILFLHGFNLYNSFYS-QLLAHIASHGFIVVAPQLYTLFP---PDGQDEIKSAASVINWLPEGLQHVLPENVEANL 119 (307)
T ss_pred CCccEEEEeechhhhhHHHH-HHHHHHhhcCeEEEechhhcccC---CCchHHHHHHHHHHHHHHhhhhhhCCCCccccc
Confidence 46689999999987777775 88999999999999999875311 111 111233344444444444333 2
Q ss_pred CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCC
Q 020741 128 LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVP 174 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~ 174 (322)
.++.++|||.||-.|..+|..+. ..-.+.++|-++|+.
T Consensus 120 ~klal~GHSrGGktAFAlALg~a---------~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 120 SKLALSGHSRGGKTAFALALGYA---------TSLKFSALIGIDPVA 157 (307)
T ss_pred ceEEEeecCCccHHHHHHHhccc---------ccCchhheecccccC
Confidence 67899999999999999995411 011278888888864
No 129
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.22 E-value=3.1e-10 Score=91.32 Aligned_cols=128 Identities=18% Similarity=0.150 Sum_probs=70.8
Q ss_pred eEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhh--------------cc---cchhhHhhhCCceE
Q 020741 27 RVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWC--------------WA---EHWLPFFADSGFDC 89 (322)
Q Consensus 27 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~--------------~~---~~~~~~l~~~g~~v 89 (322)
+..+.+.++.++.....-|+ +...+-|+||++||-++.... +. ..++..|+++||-|
T Consensus 90 Kv~f~~~p~~~vpaylLvPd------~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVv 163 (390)
T PF12715_consen 90 KVEFNTTPGSRVPAYLLVPD------GAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVV 163 (390)
T ss_dssp EEEE--STTB-EEEEEEEET------T--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEE
T ss_pred EEEEEccCCeeEEEEEEecC------CCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEE
Confidence 33455556777777766665 223466899999997655422 11 12477899999999
Q ss_pred EEeCCCCCCCCCCCCCC---CCCCHHHHHHH---------------HHHHHHH--hC---C-CCcEEEEechhHHHHHHH
Q 020741 90 YAVSLLGQGESDAPPGT---VAGSLQTHAGD---------------VADFIQK--NL---S-LPPVLLGHSFGGLIIQYY 145 (322)
Q Consensus 90 ~~~D~~G~G~S~~~~~~---~~~~~~~~~~d---------------l~~~l~~--~~---~-~~~~lvG~S~Gg~~a~~~ 145 (322)
+++|.+|+|+....... ..++...++.. ....++. .+ . ++|.++|+||||..++.+
T Consensus 164 la~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~L 243 (390)
T PF12715_consen 164 LAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWL 243 (390)
T ss_dssp EEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHH
T ss_pred EEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHH
Confidence 99999999987654431 11222333221 1122331 12 2 679999999999999999
Q ss_pred HHHHhhhhhccccCCCCCcceEEEecc
Q 020741 146 IARIRNEKMLEMETPYPEIAGAVLVCS 172 (322)
Q Consensus 146 a~~~~~~~~~~~~~~~p~v~~~vl~~~ 172 (322)
++- .++|++.|+.+.
T Consensus 244 aAL------------DdRIka~v~~~~ 258 (390)
T PF12715_consen 244 AAL------------DDRIKATVANGY 258 (390)
T ss_dssp HHH-------------TT--EEEEES-
T ss_pred HHc------------chhhHhHhhhhh
Confidence 954 777888777653
No 130
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.21 E-value=1.6e-09 Score=79.90 Aligned_cols=183 Identities=14% Similarity=0.052 Sum_probs=112.7
Q ss_pred CCCcEEEEcCCCcchhhccc---chhhHhhhCCceEEEeCCCC----CCCCCCCC------------------------C
Q 020741 57 KRPPLVFVHGSYHAAWCWAE---HWLPFFADSGFDCYAVSLLG----QGESDAPP------------------------G 105 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~---~~~~~l~~~g~~v~~~D~~G----~G~S~~~~------------------------~ 105 (322)
.++-|||+||+-.+...|.. .+.+.|.+. +..+.+|-|- -+.+.... .
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 66789999999888877762 245566666 7888887762 11111100 0
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCc-EEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCcchhh
Q 020741 106 TVAGSLQTHAGDVADFIQKNLSLPP-VLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSGLVWR 184 (322)
Q Consensus 106 ~~~~~~~~~~~dl~~~l~~~~~~~~-~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~~~~~ 184 (322)
.....+++..+.+.+++. .. .|+ .|+|+|.|+.++..++.. +..+ ......|.++=+|++++.-...
T Consensus 83 ~~~~~~eesl~yl~~~i~-en-GPFDGllGFSQGA~laa~l~~~-~~~~--~~~~~~P~~kF~v~~SGf~~~~------- 150 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIK-EN-GPFDGLLGFSQGAALAALLAGL-GQKG--LPYVKQPPFKFAVFISGFKFPS------- 150 (230)
T ss_pred ccccChHHHHHHHHHHHH-Hh-CCCccccccchhHHHHHHhhcc-cccC--CcccCCCCeEEEEEEecCCCCc-------
Confidence 011234444555566555 22 565 699999999999999861 1110 0002356677777777632110
Q ss_pred hhhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEE
Q 020741 185 YLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVL 264 (322)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl 264 (322)
......+ ....+++|.|
T Consensus 151 --------------------------------------~~~~~~~-------------------------~~~~i~~PSL 167 (230)
T KOG2551|consen 151 --------------------------------------KKLDESA-------------------------YKRPLSTPSL 167 (230)
T ss_pred --------------------------------------chhhhhh-------------------------hccCCCCCee
Confidence 0000000 0136899999
Q ss_pred EEeeCCCCccChhhHHHHhhhcC-ceeEEecCCcccceeccchhhhHHHHHHHHhh
Q 020741 265 VLGAKDDFIVDAQGLSETGSFYG-VLPVCVEGVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 265 ~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
-|.|+.|.+++...+..+++.+. ..++.-+ +||++....+ ..+.|.+||+.
T Consensus 168 Hi~G~~D~iv~~~~s~~L~~~~~~a~vl~Hp-ggH~VP~~~~---~~~~i~~fi~~ 219 (230)
T KOG2551|consen 168 HIFGETDTIVPSERSEQLAESFKDATVLEHP-GGHIVPNKAK---YKEKIADFIQS 219 (230)
T ss_pred EEecccceeecchHHHHHHHhcCCCeEEecC-CCccCCCchH---HHHHHHHHHHH
Confidence 99999999999999999999885 5444444 5999876544 55566666654
No 131
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.21 E-value=1.8e-09 Score=82.09 Aligned_cols=120 Identities=18% Similarity=0.221 Sum_probs=69.7
Q ss_pred EEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccc-hhhHhhh-CCceEEEeCCCCCCCCC--C----CCCCCCC
Q 020741 38 IEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEH-WLPFFAD-SGFDCYAVSLLGQGESD--A----PPGTVAG 109 (322)
Q Consensus 38 l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~-~~~~l~~-~g~~v~~~D~~G~G~S~--~----~~~~~~~ 109 (322)
|.|+.+-|+. ....+.|.||++||.+++...+... -...+++ .||-|+.++........ . .......
T Consensus 1 l~Y~lYvP~~-----~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~ 75 (220)
T PF10503_consen 1 LSYRLYVPPG-----APRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGG 75 (220)
T ss_pred CcEEEecCCC-----CCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCc
Confidence 4567777651 1112568999999999888776521 1234544 58999999864211110 0 0000001
Q ss_pred CHHHHHHHHHHHHHHhC--C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCC
Q 020741 110 SLQTHAGDVADFIQKNL--S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVP 174 (322)
Q Consensus 110 ~~~~~~~dl~~~l~~~~--~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~ 174 (322)
.-...+..+.+.+.... + .+|++.|+|.||+++..++.. +|+ +.++.+.++.+
T Consensus 76 ~d~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~------------~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 76 GDVAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACA------------YPDLFAAVAVVSGVP 132 (220)
T ss_pred cchhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHh------------CCccceEEEeecccc
Confidence 11112222222222132 3 789999999999999999954 999 77776666644
No 132
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=99.18 E-value=2.3e-09 Score=82.71 Aligned_cols=98 Identities=26% Similarity=0.319 Sum_probs=72.8
Q ss_pred EEcCCC--cchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEechhH
Q 020741 63 FVHGSY--HAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGG 139 (322)
Q Consensus 63 ~~HG~~--~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg 139 (322)
++|+.+ ++...|. .+...|... +.++++|.+|++.+.... .+.+.+++.+...+....+ .+++++|||+||
T Consensus 2 ~~~~~~~~~~~~~~~-~~~~~l~~~-~~v~~~~~~g~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg 75 (212)
T smart00824 2 CFPSTAAPSGPHEYA-RLAAALRGR-RDVSALPLPGFGPGEPLP----ASADALVEAQAEAVLRAAGGRPFVLVGHSSGG 75 (212)
T ss_pred ccCCCCCCCcHHHHH-HHHHhcCCC-ccEEEecCCCCCCCCCCC----CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHH
Confidence 445543 5667786 788888764 899999999998765443 3677788777766664555 889999999999
Q ss_pred HHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCC
Q 020741 140 LIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPP 175 (322)
Q Consensus 140 ~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~ 175 (322)
.++...+.++.. .+. +.+++++++..+
T Consensus 76 ~~a~~~a~~l~~---------~~~~~~~l~~~~~~~~ 103 (212)
T smart00824 76 LLAHAVAARLEA---------RGIPPAAVVLLDTYPP 103 (212)
T ss_pred HHHHHHHHHHHh---------CCCCCcEEEEEccCCC
Confidence 999999977543 233 788888876543
No 133
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.18 E-value=1.1e-10 Score=96.80 Aligned_cols=40 Identities=20% Similarity=0.224 Sum_probs=28.5
Q ss_pred CCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCC
Q 020741 56 EKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLG 96 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G 96 (322)
..-|+|||-||++++...|. .++..|+.+||-|+++|.|-
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS-~~~~eLAS~GyVV~aieHrD 137 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYS-AICGELASHGYVVAAIEHRD 137 (379)
T ss_dssp S-EEEEEEE--TT--TTTTH-HHHHHHHHTT-EEEEE---S
T ss_pred CCCCEEEEeCCCCcchhhHH-HHHHHHHhCCeEEEEeccCC
Confidence 46799999999999999997 89999999999999999994
No 134
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.16 E-value=4.9e-10 Score=81.41 Aligned_cols=101 Identities=22% Similarity=0.218 Sum_probs=75.7
Q ss_pred CcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---C-CCcEEEE
Q 020741 59 PPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNL---S-LPPVLLG 134 (322)
Q Consensus 59 ~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~---~-~~~~lvG 134 (322)
..+||+-|=++-. .....+++.|+++|+.|+.+|-+-+=.+ ..+.++.+.|+..+|+.+. + ++++|+|
T Consensus 3 t~~v~~SGDgGw~-~~d~~~a~~l~~~G~~VvGvdsl~Yfw~-------~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiG 74 (192)
T PF06057_consen 3 TLAVFFSGDGGWR-DLDKQIAEALAKQGVPVVGVDSLRYFWS-------ERTPEQTAADLARIIRHYRARWGRKRVVLIG 74 (192)
T ss_pred EEEEEEeCCCCch-hhhHHHHHHHHHCCCeEEEechHHHHhh-------hCCHHHHHHHHHHHHHHHHHHhCCceEEEEe
Confidence 3578888866655 4445789999999999999997654333 3577888999988888543 4 8899999
Q ss_pred echhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCC
Q 020741 135 HSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVP 174 (322)
Q Consensus 135 ~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~ 174 (322)
+|+|+-+.-....+++.. ...+|+.++++++..
T Consensus 75 YSFGADvlP~~~nrLp~~-------~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 75 YSFGADVLPFIYNRLPAA-------LRARVAQVVLLSPST 107 (192)
T ss_pred ecCCchhHHHHHhhCCHH-------HHhheeEEEEeccCC
Confidence 999998888888765432 123488889988753
No 135
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.14 E-value=4.6e-10 Score=86.47 Aligned_cols=101 Identities=19% Similarity=0.259 Sum_probs=65.5
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhh--------CCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHH----HHHHHH
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFAD--------SGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDV----ADFIQK 124 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~--------~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl----~~~l~~ 124 (322)
++.+|||+||.+++...++ .+...+.+ ..++++++|+......-. ...+.+.++.+ ..+++
T Consensus 3 ~g~pVlFIhG~~Gs~~q~r-sl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~-----g~~l~~q~~~~~~~i~~i~~- 75 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVR-SLASELQRKALLNDNSSHFDFFTVDFNEELSAFH-----GRTLQRQAEFLAEAIKYILE- 75 (225)
T ss_pred CCCEEEEECcCCCCHhHHH-HHHHHHhhhhhhccCccceeEEEeccCccccccc-----cccHHHHHHHHHHHHHHHHH-
Confidence 6789999999998888776 55555421 247899999875422111 12333333333 23333
Q ss_pred hC-----C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccC
Q 020741 125 NL-----S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSV 173 (322)
Q Consensus 125 ~~-----~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~ 173 (322)
.. + ++++||||||||.++..++.... ..++ |+.+|.++++
T Consensus 76 ~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~---------~~~~~v~~iitl~tP 122 (225)
T PF07819_consen 76 LYKSNRPPPRSVILVGHSMGGLVARSALSLPN---------YDPDSVKTIITLGTP 122 (225)
T ss_pred hhhhccCCCCceEEEEEchhhHHHHHHHhccc---------cccccEEEEEEEcCC
Confidence 23 3 88999999999999998885411 1234 8899998874
No 136
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=99.14 E-value=1.4e-10 Score=90.65 Aligned_cols=126 Identities=18% Similarity=0.245 Sum_probs=86.9
Q ss_pred eeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCC
Q 020741 26 TRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPG 105 (322)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~ 105 (322)
.+..+.+.||.+|........ ++..+..+..|||+-|..+--+. .+...=.+.||.|+.+++||++.|.+.+.
T Consensus 215 ~R~kiks~dgneiDtmF~d~r----~n~~~ngq~LvIC~EGNAGFYEv---G~m~tP~~lgYsvLGwNhPGFagSTG~P~ 287 (517)
T KOG1553|consen 215 QRLKIKSSDGNEIDTMFLDGR----PNQSGNGQDLVICFEGNAGFYEV---GVMNTPAQLGYSVLGWNHPGFAGSTGLPY 287 (517)
T ss_pred eEEEEeecCCcchhheeecCC----CCCCCCCceEEEEecCCccceEe---eeecChHHhCceeeccCCCCccccCCCCC
Confidence 455666777776665444432 22333456778888886544332 22333335689999999999999998776
Q ss_pred CCCCCHHHHHHHHHHHHHHhCC---CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEecc
Q 020741 106 TVAGSLQTHAGDVADFIQKNLS---LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCS 172 (322)
Q Consensus 106 ~~~~~~~~~~~dl~~~l~~~~~---~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~ 172 (322)
...-...++.+.++.-+.++ +.|++.|+|.||..+..+| ..+|+|+++|+=++
T Consensus 288 --p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waA------------s~YPdVkavvLDAt 343 (517)
T KOG1553|consen 288 --PVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAA------------SNYPDVKAVVLDAT 343 (517)
T ss_pred --cccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHh------------hcCCCceEEEeecc
Confidence 33444455555555544665 7899999999999999999 56999999988654
No 137
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.10 E-value=4.1e-09 Score=80.97 Aligned_cols=126 Identities=13% Similarity=0.076 Sum_probs=74.7
Q ss_pred EEEeCCCCceEEEEEecCCCCCCCCCCCCCC-CcEEEEcCCCcchhhcccch-------hhHhhhCCceEEEeCCC-CCC
Q 020741 28 VSHQLPSGLNIEVIEQKSVTSKDPDTKNEKR-PPLVFVHGSYHAAWCWAEHW-------LPFFADSGFDCYAVSLL-GQG 98 (322)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~-~~vl~~HG~~~~~~~~~~~~-------~~~l~~~g~~v~~~D~~-G~G 98 (322)
.+...+-|.+|.|+.+-|+ .-..++.- |.|||+||.|.....-+..+ +....+.++-|+++.+- =+-
T Consensus 164 ~f~d~~tgneLkYrly~Pk----dy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~ 239 (387)
T COG4099 164 EFYDESTGNELKYRLYTPK----DYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFA 239 (387)
T ss_pred EeeccccCceeeEEEeccc----ccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccc
Confidence 3444557899999999985 12233344 89999999976554432111 11122223344444421 111
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHhCC---CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEecc
Q 020741 99 ESDAPPGTVAGSLQTHAGDVADFIQKNLS---LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCS 172 (322)
Q Consensus 99 ~S~~~~~~~~~~~~~~~~dl~~~l~~~~~---~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~ 172 (322)
.++... .......++-+.+.+....+ .+|+++|.|+||+-++.++.+ +|+ +.+.+++++
T Consensus 240 d~e~~t---~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~k------------fPdfFAaa~~iaG 302 (387)
T COG4099 240 DSEEKT---LLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEK------------FPDFFAAAVPIAG 302 (387)
T ss_pred cccccc---chhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHh------------CchhhheeeeecC
Confidence 121111 12233344444444443443 789999999999999999954 999 889999886
No 138
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.08 E-value=5.9e-10 Score=89.09 Aligned_cols=90 Identities=23% Similarity=0.245 Sum_probs=62.9
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCC--CCCCCCCCC-----------CCCCHHHHHHHHHHH--
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQ--GESDAPPGT-----------VAGSLQTHAGDVADF-- 121 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~--G~S~~~~~~-----------~~~~~~~~~~dl~~~-- 121 (322)
..|.|++-||.|++...|. .+++.+++.||-|.++|.+|- |........ ...++....+.+.+.
T Consensus 70 ~~PlvvlshG~Gs~~~~f~-~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~ 148 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFA-WLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTA 148 (365)
T ss_pred cCCeEEecCCCCCCccchh-hhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhc
Confidence 6789999999999999886 899999999999999999983 333322211 111222222222222
Q ss_pred ---HHHhCC-CCcEEEEechhHHHHHHHHH
Q 020741 122 ---IQKNLS-LPPVLLGHSFGGLIIQYYIA 147 (322)
Q Consensus 122 ---l~~~~~-~~~~lvG~S~Gg~~a~~~a~ 147 (322)
+...+. .+|.++|||+||..++.++.
T Consensus 149 sP~l~~~ld~~~Vgv~GhS~GG~T~m~laG 178 (365)
T COG4188 149 SPALAGRLDPQRVGVLGHSFGGYTAMELAG 178 (365)
T ss_pred CcccccccCccceEEEecccccHHHHHhcc
Confidence 111234 67999999999999999983
No 139
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=99.08 E-value=8.4e-09 Score=88.31 Aligned_cols=140 Identities=14% Similarity=0.137 Sum_probs=91.2
Q ss_pred eeEEEeCC--CCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhh-------------------Hhhh
Q 020741 26 TRVSHQLP--SGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLP-------------------FFAD 84 (322)
Q Consensus 26 ~~~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~-------------------~l~~ 84 (322)
...++.+. .+..++|+.+... ...+++|.||++.|.++++..+. .+.+ ...+
T Consensus 12 ~sGyl~~~~~~~~~lfyw~~~s~------~~~~~~Pl~~wlnGGPG~SS~~g-~f~e~GP~~~~~~~~~~l~~n~~sW~~ 84 (415)
T PF00450_consen 12 YSGYLPVNDNENAHLFYWFFESR------NDPEDDPLILWLNGGPGCSSMWG-LFGENGPFRINPDGPYTLEDNPYSWNK 84 (415)
T ss_dssp EEEEEEECTTTTEEEEEEEEE-S------SGGCSS-EEEEEE-TTTB-THHH-HHCTTSSEEEETTSTSEEEE-TT-GGG
T ss_pred EEEEEecCCCCCcEEEEEEEEeC------CCCCCccEEEEecCCceeccccc-cccccCceEEeeccccccccccccccc
Confidence 44566665 6789999999854 34567899999999988877763 2211 1112
Q ss_pred CCceEEEeCCC-CCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhC------C-CCcEEEEechhHHHHHHHHHHHhhhhhc
Q 020741 85 SGFDCYAVSLL-GQGESDAPPGT-VAGSLQTHAGDVADFIQKNL------S-LPPVLLGHSFGGLIIQYYIARIRNEKML 155 (322)
Q Consensus 85 ~g~~v~~~D~~-G~G~S~~~~~~-~~~~~~~~~~dl~~~l~~~~------~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~ 155 (322)
-.+++.+|.| |.|.|...... ...+.++.++++.++|+..+ . .+++|.|.|+||..+-.+|..+.+....
T Consensus 85 -~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~ 163 (415)
T PF00450_consen 85 -FANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKK 163 (415)
T ss_dssp -TSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC
T ss_pred -ccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccc
Confidence 2689999955 99999876652 24578889999888888542 3 5899999999999999998876655210
Q ss_pred cccCCCCCcceEEEeccCC
Q 020741 156 EMETPYPEIAGAVLVCSVP 174 (322)
Q Consensus 156 ~~~~~~p~v~~~vl~~~~~ 174 (322)
.. ...-.++++++.++..
T Consensus 164 ~~-~~~inLkGi~IGng~~ 181 (415)
T PF00450_consen 164 GD-QPKINLKGIAIGNGWI 181 (415)
T ss_dssp ---STTSEEEEEEEESE-S
T ss_pred cc-ccccccccceecCccc
Confidence 00 0012389999988754
No 140
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.07 E-value=9.2e-09 Score=87.43 Aligned_cols=132 Identities=15% Similarity=0.123 Sum_probs=93.2
Q ss_pred eeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchh---hcc-cchhh---HhhhCCceEEEeCCCCCC
Q 020741 26 TRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAW---CWA-EHWLP---FFADSGFDCYAVSLLGQG 98 (322)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~---~~~-~~~~~---~l~~~g~~v~~~D~~G~G 98 (322)
....|+..||++|+...+.|. +..+.|+++..+-++-... .+. ....+ .++.+||.|+..|.||.|
T Consensus 20 ~~v~V~MRDGvrL~~dIy~Pa-------~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~ 92 (563)
T COG2936 20 RDVMVPMRDGVRLAADIYRPA-------GAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRG 92 (563)
T ss_pred eeeeEEecCCeEEEEEEEccC-------CCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccc
Confidence 457889999999999999976 3357788888883222222 111 12234 578899999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHh--CCCCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCC
Q 020741 99 ESDAPPGTVAGSLQTHAGDVADFIQKN--LSLPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPP 175 (322)
Q Consensus 99 ~S~~~~~~~~~~~~~~~~dl~~~l~~~--~~~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~ 175 (322)
.|.+........-.+-.-|++++|.+. .+.+|..+|.|++|...+.+|+. .+|.+++++..++...
T Consensus 93 ~SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~-----------~pPaLkai~p~~~~~D 160 (563)
T COG2936 93 GSEGVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAAL-----------QPPALKAIAPTEGLVD 160 (563)
T ss_pred cCCcccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhc-----------CCchheeecccccccc
Confidence 999987732111223334566666522 23899999999999999999964 4666998888877543
No 141
>PRK04940 hypothetical protein; Provisional
Probab=99.07 E-value=1.7e-08 Score=73.30 Aligned_cols=172 Identities=15% Similarity=0.120 Sum_probs=95.4
Q ss_pred cEEEEcCCCcchhh--cccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----CCcEEE
Q 020741 60 PLVFVHGSYHAAWC--WAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS----LPPVLL 133 (322)
Q Consensus 60 ~vl~~HG~~~~~~~--~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~----~~~~lv 133 (322)
.||++||+.+++.+ ........+ ..+.+++ +++ .....+.++.+.+.+.+... +++.||
T Consensus 1 ~IlYlHGF~SS~~S~~~Ka~~l~~~-~p~~~~~--~l~------------~~~P~~a~~~l~~~i~~~~~~~~~~~~~li 65 (180)
T PRK04940 1 MIIYLHGFDSTSPGNHEKVLQLQFI-DPDVRLI--SYS------------TLHPKHDMQHLLKEVDKMLQLSDDERPLIC 65 (180)
T ss_pred CEEEeCCCCCCCCccHHHHHhheee-CCCCeEE--ECC------------CCCHHHHHHHHHHHHHHhhhccCCCCcEEE
Confidence 38999999888776 431122222 1123333 221 13445555555555553221 579999
Q ss_pred EechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCCCcchhhhhhccchhhhHHHHHHhHhhhcccccccc
Q 020741 134 GHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCK 213 (322)
Q Consensus 134 G~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (322)
|.|+||..|..++.++ . .+.|+++|+.... ..+.... .. .
T Consensus 66 GSSLGGyyA~~La~~~------------g--~~aVLiNPAv~P~-----------------~~L~~~i----g~-----~ 105 (180)
T PRK04940 66 GVGLGGYWAERIGFLC------------G--IRQVIFNPNLFPE-----------------ENMEGKI----DR-----P 105 (180)
T ss_pred EeChHHHHHHHHHHHH------------C--CCEEEECCCCChH-----------------HHHHHHh----CC-----C
Confidence 9999999999999763 2 3677888853220 0000000 00 0
Q ss_pred ccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcCc-eeEE
Q 020741 214 ETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYGV-LPVC 292 (322)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~-~~~~ 292 (322)
..+ . .+.+..++.+. .+..-..+++..+.|++.+...+.+... +. +..+
T Consensus 106 ~~y-~-~~~~~h~~eL~--------------------------~~~p~r~~vllq~gDEvLDyr~a~~~y~--~~y~~~v 155 (180)
T PRK04940 106 EEY-A-DIATKCVTNFR--------------------------EKNRDRCLVILSRNDEVLDSQRTAEELH--PYYEIVW 155 (180)
T ss_pred cch-h-hhhHHHHHHhh--------------------------hcCcccEEEEEeCCCcccCHHHHHHHhc--cCceEEE
Confidence 000 0 11222222211 0122345899999999999876654433 33 6778
Q ss_pred ecCCcccceeccchhhhHHHHHHHHhh
Q 020741 293 VEGVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 293 ~~~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
.+|++|.+. + .++....|.+|++.
T Consensus 156 ~~GGdH~f~-~--fe~~l~~I~~F~~~ 179 (180)
T PRK04940 156 DEEQTHKFK-N--ISPHLQRIKAFKTL 179 (180)
T ss_pred ECCCCCCCC-C--HHHHHHHHHHHHhc
Confidence 888777543 2 25678889999853
No 142
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.00 E-value=2.1e-10 Score=86.95 Aligned_cols=87 Identities=30% Similarity=0.491 Sum_probs=53.5
Q ss_pred CcEEEEcCCCc-chhhcccchhhHhhhCCce---EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CCCcE
Q 020741 59 PPLVFVHGSYH-AAWCWAEHWLPFFADSGFD---CYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNL---SLPPV 131 (322)
Q Consensus 59 ~~vl~~HG~~~-~~~~~~~~~~~~l~~~g~~---v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~---~~~~~ 131 (322)
.||||+||.++ ....|. .+.+.|.++||. ++++++-....+..... .....+.++.+.++|++.+ +.+|.
T Consensus 2 ~PVVlVHG~~~~~~~~w~-~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~--~~~~~~~~~~l~~fI~~Vl~~TGakVD 78 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWS-TLAPYLKAAGYCDSEVYALTYGSGNGSPSVQN--AHMSCESAKQLRAFIDAVLAYTGAKVD 78 (219)
T ss_dssp --EEEE--TTTTTCGGCC-HHHHHHHHTT--CCCEEEE--S-CCHHTHHHH--HHB-HHHHHHHHHHHHHHHHHHT--EE
T ss_pred CCEEEECCCCcchhhCHH-HHHHHHHHcCCCcceeEeccCCCCCCCCcccc--cccchhhHHHHHHHHHHHHHhhCCEEE
Confidence 47999999988 667886 899999999999 79999854332211111 1112344466777776544 46999
Q ss_pred EEEechhHHHHHHHHHH
Q 020741 132 LLGHSFGGLIIQYYIAR 148 (322)
Q Consensus 132 lvG~S~Gg~~a~~~a~~ 148 (322)
|||||+||.++-.+...
T Consensus 79 IVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 79 IVGHSMGGTIARYYIKG 95 (219)
T ss_dssp EEEETCHHHHHHHHHHH
T ss_pred EEEcCCcCHHHHHHHHH
Confidence 99999999999988854
No 143
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.97 E-value=6.9e-08 Score=72.70 Aligned_cols=110 Identities=20% Similarity=0.269 Sum_probs=75.7
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCC-----ceEEEeCCCCC----CCCCCCCC---------CCCCC---HHHHH
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSG-----FDCYAVSLLGQ----GESDAPPG---------TVAGS---LQTHA 115 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g-----~~v~~~D~~G~----G~S~~~~~---------~~~~~---~~~~~ 115 (322)
..-|.||+||.+++..+.. .++..|...+ --++.+|--|- |.=+.... ....+ ...+.
T Consensus 44 ~~iPTIfIhGsgG~asS~~-~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wl 122 (288)
T COG4814 44 VAIPTIFIHGSGGTASSLN-GMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWL 122 (288)
T ss_pred cccceEEEecCCCChhHHH-HHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHH
Confidence 3457899999999999886 7788887653 12455565551 11111110 11123 34455
Q ss_pred HHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccC
Q 020741 116 GDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSV 173 (322)
Q Consensus 116 ~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~ 173 (322)
+-+...|.++.+ .++.++||||||.-...|+..++.. ...|.+..+|.+++.
T Consensus 123 k~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~d------ks~P~lnK~V~l~gp 175 (288)
T COG4814 123 KKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDD------KSLPPLNKLVSLAGP 175 (288)
T ss_pred HHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCC------CCCcchhheEEeccc
Confidence 555566666677 8999999999999999999988766 368889999999874
No 144
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.92 E-value=3e-08 Score=79.68 Aligned_cols=58 Identities=24% Similarity=0.235 Sum_probs=42.6
Q ss_pred CccccEEEEeeCCCCccChhhHHHHhhhc------CceeEEecCCcccceeccchhhhHHHHHHHHhh
Q 020741 258 KSSIKVLVLGAKDDFIVDAQGLSETGSFY------GVLPVCVEGVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 258 ~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~------~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
..+.|+++.+|..|.++|......+.+.. +++++.+++.+|....-.. .....+||++
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~----~~~a~~Wl~~ 280 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFAS----APDALAWLDD 280 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcC----cHHHHHHHHH
Confidence 55799999999999999988877776654 2677888899998654333 3444566654
No 145
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.90 E-value=1.7e-08 Score=73.97 Aligned_cols=175 Identities=17% Similarity=0.190 Sum_probs=108.9
Q ss_pred CCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCC--------CCCC--------CCCCCHHHHHHHHHHH
Q 020741 58 RPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESD--------APPG--------TVAGSLQTHAGDVADF 121 (322)
Q Consensus 58 ~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~--------~~~~--------~~~~~~~~~~~dl~~~ 121 (322)
..+||++||.+.+...|. .+.+.|.-++...|++..|-.-.+. .-.. .........++.+..+
T Consensus 3 ~atIi~LHglGDsg~~~~-~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWA-QFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCccHH-HHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 458999999999999886 6666676666777777444211110 0000 1123455566667777
Q ss_pred HHHhC----C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCCCCcchhhhhhccchhhhH
Q 020741 122 IQKNL----S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFK 195 (322)
Q Consensus 122 l~~~~----~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (322)
+++.. . .++.+-|.|+||.+++..+ ..+|. +.+.+...+..+...
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~------------~~~~~~l~G~~~~s~~~p~~~----------------- 132 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSA------------LTYPKALGGIFALSGFLPRAS----------------- 132 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHH------------hccccccceeeccccccccch-----------------
Confidence 77543 2 5689999999999999999 44665 666655544211000
Q ss_pred HHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccC
Q 020741 196 VTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVD 275 (322)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~ 275 (322)
.. + ..+.. ..-..|++..||+.|+++|
T Consensus 133 ----------------------------~~---~---------------~~~~~-------~~~~~~i~~~Hg~~d~~vp 159 (206)
T KOG2112|consen 133 ----------------------------IG---L---------------PGWLP-------GVNYTPILLCHGTADPLVP 159 (206)
T ss_pred ----------------------------hh---c---------------cCCcc-------ccCcchhheecccCCceee
Confidence 00 0 00000 0016699999999999999
Q ss_pred hhhHHHHhhhc-----CceeEEecCCcccceeccchhhhHHHHHHHHhhh
Q 020741 276 AQGLSETGSFY-----GVLPVCVEGVAHDMMLDCSWEKGASVILSWLDGL 320 (322)
Q Consensus 276 ~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 320 (322)
....+...+.+ .+++..++|.+|....+. .+.+..|++++
T Consensus 160 ~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~~e-----~~~~~~~~~~l 204 (206)
T KOG2112|consen 160 FRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSPQE-----LDDLKSWIKTL 204 (206)
T ss_pred hHHHHHHHHHHHHcCCceeeeecCCccccccHHH-----HHHHHHHHHHh
Confidence 76655554443 288899999999876332 44566676653
No 146
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.90 E-value=9.4e-08 Score=70.42 Aligned_cols=104 Identities=21% Similarity=0.297 Sum_probs=75.8
Q ss_pred CCCcEEEEcCCCcchh--hcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-----CC
Q 020741 57 KRPPLVFVHGSYHAAW--CWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-----LP 129 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~--~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-----~~ 129 (322)
.+..|||+-|++..-. .|...+..+|.+.+|.++-+-++.+ .. .....++.+-++|+..+++ +++ .+
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ss----y~-G~Gt~slk~D~edl~~l~~-Hi~~~~fSt~ 108 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSS----YN-GYGTFSLKDDVEDLKCLLE-HIQLCGFSTD 108 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccc----cc-ccccccccccHHHHHHHHH-HhhccCcccc
Confidence 3467899999875533 3445678888888999999987732 11 1124578888999999999 442 48
Q ss_pred cEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCC
Q 020741 130 PVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPS 176 (322)
Q Consensus 130 ~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~ 176 (322)
|+|+|||.|+.=.+.|... ...|+ +.+.|+.+|+...
T Consensus 109 vVL~GhSTGcQdi~yYlTn----------t~~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 109 VVLVGHSTGCQDIMYYLTN----------TTKDRKIRAAILQAPVSDR 146 (299)
T ss_pred eEEEecCccchHHHHHHHh----------ccchHHHHHHHHhCccchh
Confidence 9999999999999988844 34566 8888888876543
No 147
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.89 E-value=9.2e-09 Score=86.62 Aligned_cols=92 Identities=11% Similarity=0.219 Sum_probs=65.2
Q ss_pred cchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCC-CCcEEEEechhHHHHHH
Q 020741 69 HAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQK---NLS-LPPVLLGHSFGGLIIQY 144 (322)
Q Consensus 69 ~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~---~~~-~~~~lvG~S~Gg~~a~~ 144 (322)
.....|. .+++.|.+.||.+ ..|++|+|.+-.... ..++..+++.+.|++ ..+ .+++|+||||||.++..
T Consensus 105 ~~~~~~~-~li~~L~~~GY~~-~~dL~g~gYDwR~~~----~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~ 178 (440)
T PLN02733 105 DEVYYFH-DMIEQLIKWGYKE-GKTLFGFGYDFRQSN----RLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKC 178 (440)
T ss_pred chHHHHH-HHHHHHHHcCCcc-CCCcccCCCCccccc----cHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHH
Confidence 4456775 8999999999765 899999999866532 244455555555543 345 89999999999999999
Q ss_pred HHHHHhhhhhccccCCCCCcceEEEeccC
Q 020741 145 YIARIRNEKMLEMETPYPEIAGAVLVCSV 173 (322)
Q Consensus 145 ~a~~~~~~~~~~~~~~~p~v~~~vl~~~~ 173 (322)
++...++. ...-|+++|.++++
T Consensus 179 fl~~~p~~-------~~k~I~~~I~la~P 200 (440)
T PLN02733 179 FMSLHSDV-------FEKYVNSWIAIAAP 200 (440)
T ss_pred HHHHCCHh-------HHhHhccEEEECCC
Confidence 99652211 01127899999764
No 148
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.84 E-value=5.8e-08 Score=75.31 Aligned_cols=43 Identities=28% Similarity=0.365 Sum_probs=37.8
Q ss_pred CCCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCC
Q 020741 55 NEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQG 98 (322)
Q Consensus 55 ~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G 98 (322)
+.+-|.|||-||++++...|. .+.-.|+.+||-|.+++.|-+-
T Consensus 115 ~~k~PvvvFSHGLggsRt~YS-a~c~~LAShG~VVaavEHRD~S 157 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRTLYS-AYCTSLASHGFVVAAVEHRDRS 157 (399)
T ss_pred CCCccEEEEecccccchhhHH-HHhhhHhhCceEEEEeecccCc
Confidence 456699999999999999986 8899999999999999998653
No 149
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.82 E-value=2.5e-09 Score=86.96 Aligned_cols=112 Identities=14% Similarity=0.261 Sum_probs=63.1
Q ss_pred CCCCcEEEEcCCCcch--hhcccchhhHhhh---CCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---h--
Q 020741 56 EKRPPLVFVHGSYHAA--WCWAEHWLPFFAD---SGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQK---N-- 125 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~--~~~~~~~~~~l~~---~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~---~-- 125 (322)
.++|++|++|||.++. ..|...+.+.+.+ .++.|+++|+...-....... ........+.+..+|.. .
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a--~~n~~~vg~~la~~l~~L~~~~g 146 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQA--VANTRLVGRQLAKFLSFLINNFG 146 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHH--HHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccch--hhhHHHHHHHHHHHHHHHHhhcC
Confidence 4789999999997666 4565455665433 479999999963211100000 01122233333333332 1
Q ss_pred CC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCCCCC
Q 020741 126 LS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPPSGN 178 (322)
Q Consensus 126 ~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~ 178 (322)
+. ++++|||||+||.+|-.++..++. .-.|.+++.++|+.+.-.
T Consensus 147 ~~~~~ihlIGhSLGAHvaG~aG~~~~~---------~~ki~rItgLDPAgP~F~ 191 (331)
T PF00151_consen 147 VPPENIHLIGHSLGAHVAGFAGKYLKG---------GGKIGRITGLDPAGPLFE 191 (331)
T ss_dssp --GGGEEEEEETCHHHHHHHHHHHTTT------------SSEEEEES-B-TTTT
T ss_pred CChhHEEEEeeccchhhhhhhhhhccC---------cceeeEEEecCccccccc
Confidence 24 889999999999999999977321 013899999999866433
No 150
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.77 E-value=4.9e-06 Score=70.04 Aligned_cols=139 Identities=15% Similarity=0.097 Sum_probs=89.0
Q ss_pred eeEEEeCC--CCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchh---h--------Hhhh------CC
Q 020741 26 TRVSHQLP--SGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWL---P--------FFAD------SG 86 (322)
Q Consensus 26 ~~~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~---~--------~l~~------~g 86 (322)
...++.+. .|..|+|+..... .....+|.||++.|+++++..-. .+. + .|.. +-
T Consensus 45 ysGYv~v~~~~~~~LFYwf~eS~------~~P~~dPlvLWLnGGPGCSSl~G-~~~E~GPf~v~~~G~tL~~N~ySWnk~ 117 (454)
T KOG1282|consen 45 YSGYVTVNESEGRQLFYWFFESE------NNPETDPLVLWLNGGPGCSSLGG-LFEENGPFRVKYNGKTLYLNPYSWNKE 117 (454)
T ss_pred ccceEECCCCCCceEEEEEEEcc------CCCCCCCEEEEeCCCCCccchhh-hhhhcCCeEEcCCCCcceeCCcccccc
Confidence 44667775 5899999999854 34457899999999987764431 110 0 1111 11
Q ss_pred ceEEEeCCC-CCCCCCCCCCCC-CCCHHHHHHHHHHHHHHhC-------CCCcEEEEechhHHHHHHHHHHHhhhhhccc
Q 020741 87 FDCYAVSLL-GQGESDAPPGTV-AGSLQTHAGDVADFIQKNL-------SLPPVLLGHSFGGLIIQYYIARIRNEKMLEM 157 (322)
Q Consensus 87 ~~v~~~D~~-G~G~S~~~~~~~-~~~~~~~~~dl~~~l~~~~-------~~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~ 157 (322)
.+++.+|.| |.|.|-...... ..+-+..++|+..+|.+.+ ..+++|.|-|++|+..-.+|.+.-+....
T Consensus 118 aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~-- 195 (454)
T KOG1282|consen 118 ANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKK-- 195 (454)
T ss_pred ccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhcccc--
Confidence 368888987 788776444311 1244556667666665433 37899999999999999998876543100
Q ss_pred cCCCC--CcceEEEeccCC
Q 020741 158 ETPYP--EIAGAVLVCSVP 174 (322)
Q Consensus 158 ~~~~p--~v~~~vl~~~~~ 174 (322)
...| +++++++-++..
T Consensus 196 -~~~~~iNLkG~~IGNg~t 213 (454)
T KOG1282|consen 196 -CCKPNINLKGYAIGNGLT 213 (454)
T ss_pred -ccCCcccceEEEecCccc
Confidence 0123 378888877754
No 151
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.73 E-value=9.2e-06 Score=68.10 Aligned_cols=78 Identities=21% Similarity=0.363 Sum_probs=54.9
Q ss_pred chhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----C-CCcEEEEechhHHHHHHHHHHHhh
Q 020741 77 HWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNL----S-LPPVLLGHSFGGLIIQYYIARIRN 151 (322)
Q Consensus 77 ~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~----~-~~~~lvG~S~Gg~~a~~~a~~~~~ 151 (322)
.+...|. .|+.|+.+.+. ..+.. .-++.+.+.....++++.. + .+.+|+|.|.||+.++.+|+.
T Consensus 92 evG~AL~-~GHPvYFV~F~-----p~P~p--gQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~--- 160 (581)
T PF11339_consen 92 EVGVALR-AGHPVYFVGFF-----PEPEP--GQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAAL--- 160 (581)
T ss_pred HHHHHHH-cCCCeEEEEec-----CCCCC--CCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhc---
Confidence 3455564 58999988765 11222 3578887777666666332 2 589999999999999999954
Q ss_pred hhhccccCCCCCcceEEEeccCC
Q 020741 152 EKMLEMETPYPEIAGAVLVCSVP 174 (322)
Q Consensus 152 ~~~~~~~~~~p~v~~~vl~~~~~ 174 (322)
+|+..+-++++++|
T Consensus 161 ---------~Pd~~gplvlaGaP 174 (581)
T PF11339_consen 161 ---------RPDLVGPLVLAGAP 174 (581)
T ss_pred ---------CcCccCceeecCCC
Confidence 99977777777654
No 152
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.71 E-value=9.7e-07 Score=69.50 Aligned_cols=227 Identities=17% Similarity=0.127 Sum_probs=117.6
Q ss_pred cEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC---CcEEEEec
Q 020741 60 PLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSL---PPVLLGHS 136 (322)
Q Consensus 60 ~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~---~~~lvG~S 136 (322)
++|++=||.+..........+...+.|++++.+-.+-....... ......++.+.+.+...... ++++-.+|
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~~~~~~~~~il~H~FS 75 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS-----KRLAPAADKLLELLSDSQSASPPPILFHSFS 75 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec-----cchHHHHHHHHHHhhhhccCCCCCEEEEEEE
Confidence 47888888765554333455666668999999876532111111 34566666677776633332 79999999
Q ss_pred hhHHHHHHHHHH-HhhhhhccccCCCCCcceEEEeccCCCCCCC-cchhhhhhccchhhhH---HHHHHhHhhhcccccc
Q 020741 137 FGGLIIQYYIAR-IRNEKMLEMETPYPEIAGAVLVCSVPPSGNS-GLVWRYLFTKPIAAFK---VTRSLAAKAFQTDLSL 211 (322)
Q Consensus 137 ~Gg~~a~~~a~~-~~~~~~~~~~~~~p~v~~~vl~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 211 (322)
.||...+..... +....... ...|.++++| +++.|..... ..........+..... ...............
T Consensus 76 nGG~~~~~~l~~~~~~~~~~~--~~~~~i~g~I-~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 151 (240)
T PF05705_consen 76 NGGSFLYSQLLEAYQSRKKFG--KLLPRIKGII-FDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLLRLSII- 151 (240)
T ss_pred CchHHHHHHHHHHHHhccccc--ccccccceeE-EeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHH-
Confidence 988877666543 21111000 1233366666 4554433222 1111111111111000 000000000000000
Q ss_pred ccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhc---C-
Q 020741 212 CKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFY---G- 287 (322)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~---~- 287 (322)
....... ......+.+.+ .........+|-|+++++.|.+++.+..++..+.. +
T Consensus 152 ~~~~~~~----~~~~~~~~~~~------------------~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~ 209 (240)
T PF05705_consen 152 SYFIFGY----PDVQEYYRRAL------------------NDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGW 209 (240)
T ss_pred HHHHhcC----CcHHHHHHHHH------------------hhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCC
Confidence 0000000 00000010000 00111245689999999999999998777766544 2
Q ss_pred -ceeEEecCCcccceeccchhhhHHHHHHHH
Q 020741 288 -VLPVCVEGVAHDMMLDCSWEKGASVILSWL 317 (322)
Q Consensus 288 -~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl 317 (322)
++...++++.|..++...+++..+.+.+|+
T Consensus 210 ~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 210 DVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred eEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 778888999999988665599999999885
No 153
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.71 E-value=1.5e-07 Score=79.44 Aligned_cols=175 Identities=14% Similarity=0.176 Sum_probs=111.0
Q ss_pred CCCcEEEEcCCC--cchhhcccchhhHhhhCC--ceEEEeCCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHH-------
Q 020741 57 KRPPLVFVHGSY--HAAWCWAEHWLPFFADSG--FDCYAVSLLGQ-GESDAPPGTVAGSLQTHAGDVADFIQK------- 124 (322)
Q Consensus 57 ~~~~vl~~HG~~--~~~~~~~~~~~~~l~~~g--~~v~~~D~~G~-G~S~~~~~~~~~~~~~~~~dl~~~l~~------- 124 (322)
..|.++++||.+ .....|.-.|-..|+-.| ..+-++|++.- | ..++...++.+..+.+.
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~ig---------G~nI~h~ae~~vSf~r~kvlei~g 245 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIG---------GANIKHAAEYSVSFDRYKVLEITG 245 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCC---------CcchHHHHHHHHHHhhhhhhhhhc
Confidence 567899999986 122222213444444433 45677787632 1 13455555555554441
Q ss_pred hCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC--cceEEEeccCCCCCCCcchhhhhhccchhhhHHHHHHh
Q 020741 125 NLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE--IAGAVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLA 201 (322)
Q Consensus 125 ~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~--v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (322)
.+. .+|+|+|.|+|+.++...... .-+ |.++|+++-........
T Consensus 246 efpha~IiLvGrsmGAlVachVSps------------nsdv~V~~vVCigypl~~vdgp--------------------- 292 (784)
T KOG3253|consen 246 EFPHAPIILVGRSMGALVACHVSPS------------NSDVEVDAVVCIGYPLDTVDGP--------------------- 292 (784)
T ss_pred cCCCCceEEEecccCceeeEEeccc------------cCCceEEEEEEecccccCCCcc---------------------
Confidence 234 889999999998888888743 332 77887776321110000
Q ss_pred HhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHH
Q 020741 202 AKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSE 281 (322)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~ 281 (322)
..+.++ .+-.++.|+|+|.|.+|..++++..++
T Consensus 293 -----------------rgirDE------------------------------~Lldmk~PVLFV~Gsnd~mcspn~ME~ 325 (784)
T KOG3253|consen 293 -----------------RGIRDE------------------------------ALLDMKQPVLFVIGSNDHMCSPNSMEE 325 (784)
T ss_pred -----------------cCCcch------------------------------hhHhcCCceEEEecCCcccCCHHHHHH
Confidence 011111 122578899999999999999999999
Q ss_pred HhhhcC--ceeEEecCCcccceecc--------chhhhHHHHHHHHhhh
Q 020741 282 TGSFYG--VLPVCVEGVAHDMMLDC--------SWEKGASVILSWLDGL 320 (322)
Q Consensus 282 ~~~~~~--~~~~~~~~~gH~~~~~~--------~~~~~~~~i~~fl~~~ 320 (322)
+.+... .+++++.+++|.+-... .+.++...+.+||.++
T Consensus 326 vreKMqA~~elhVI~~adhsmaipk~k~esegltqseVd~~i~~aI~ef 374 (784)
T KOG3253|consen 326 VREKMQAEVELHVIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEF 374 (784)
T ss_pred HHHHhhccceEEEecCCCccccCCccccccccccHHHHHHHHHHHHHHH
Confidence 999884 89999999999876433 1456666666666553
No 154
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.70 E-value=2.5e-07 Score=73.30 Aligned_cols=111 Identities=18% Similarity=0.270 Sum_probs=76.7
Q ss_pred ceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhc------ccchhhHhhhCCceEEEeCCCCCC
Q 020741 25 QTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCW------AEHWLPFFADSGFDCYAVSLLGQG 98 (322)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~------~~~~~~~l~~~g~~v~~~D~~G~G 98 (322)
..+..+.. |++.|......-+ ..+....||++-|.++.-+.. ...+.+...+.|.+|+.+++||.|
T Consensus 112 ~kRv~Iq~-D~~~IDt~~I~~~-------~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg 183 (365)
T PF05677_consen 112 VKRVPIQY-DGVKIDTMAIHQP-------EAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVG 183 (365)
T ss_pred eeeEEEee-CCEEEEEEEeeCC-------CCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccc
Confidence 35556666 8988887776632 235778999999987665541 112333444458999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHH---Hh-C--C-CCcEEEEechhHHHHHHHHHH
Q 020741 99 ESDAPPGTVAGSLQTHAGDVADFIQ---KN-L--S-LPPVLLGHSFGGLIIQYYIAR 148 (322)
Q Consensus 99 ~S~~~~~~~~~~~~~~~~dl~~~l~---~~-~--~-~~~~lvG~S~Gg~~a~~~a~~ 148 (322)
.|.+... .+++++|-.+.++ .. . + +.+++.|||+||.++..++.+
T Consensus 184 ~S~G~~s-----~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~ 235 (365)
T PF05677_consen 184 SSTGPPS-----RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKK 235 (365)
T ss_pred cCCCCCC-----HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHh
Confidence 9987664 4566665544444 11 1 2 679999999999998886644
No 155
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.69 E-value=8.1e-08 Score=74.55 Aligned_cols=115 Identities=17% Similarity=0.123 Sum_probs=69.3
Q ss_pred CCCCcEEEEcCCCcchhhcccchhhHhhhCCc--eEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCC-CC
Q 020741 56 EKRPPLVFVHGSYHAAWCWAEHWLPFFADSGF--DCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQK---NLS-LP 129 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~--~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~---~~~-~~ 129 (322)
+.+..+||+||+..+...-....++.....++ .++.+.+|+.|.-..-.. ...+...-...+.++|+. ..+ ++
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~-d~~~a~~s~~~l~~~L~~L~~~~~~~~ 94 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFY-DRESARFSGPALARFLRDLARAPGIKR 94 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhh-hhhhHHHHHHHHHHHHHHHHhccCCce
Confidence 47789999999977654432222222222233 799999998876322111 112333344455555552 224 88
Q ss_pred cEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccC
Q 020741 130 PVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSV 173 (322)
Q Consensus 130 ~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~ 173 (322)
|+|++||||+.+.+.+...+..++... .....+..+++++|-
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~--~~~~~~~~viL~ApD 136 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERP--DVKARFDNVILAAPD 136 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccch--hhHhhhheEEEECCC
Confidence 999999999999999998766542100 001137788888763
No 156
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.65 E-value=1.9e-06 Score=72.77 Aligned_cols=121 Identities=18% Similarity=0.170 Sum_probs=71.1
Q ss_pred CceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhhhCCc----eEEEeCCCCC-CCCCCCCCCCCC
Q 020741 35 GLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFADSGF----DCYAVSLLGQ-GESDAPPGTVAG 109 (322)
Q Consensus 35 g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~----~v~~~D~~G~-G~S~~~~~~~~~ 109 (322)
|.+..+..+.|+ ... .+..|+|+++||..-.........++.|.+.|. .++.+|..+. ..+..... ...
T Consensus 191 g~~r~v~VY~P~----~y~-~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~-~~~ 264 (411)
T PRK10439 191 GNSRRVWIYTTG----DAA-PEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPC-NAD 264 (411)
T ss_pred CCceEEEEEECC----CCC-CCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCc-hHH
Confidence 556667777765 111 245789999999531111101123455555553 3567775321 11111111 011
Q ss_pred CHHHHHHHHHHHHHHhCC-----CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccC
Q 020741 110 SLQTHAGDVADFIQKNLS-----LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSV 173 (322)
Q Consensus 110 ~~~~~~~dl~~~l~~~~~-----~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~ 173 (322)
-...+++++.-+|++... ++.+|+|+||||..|+.++ ..+|+ +.+++.+++.
T Consensus 265 f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~a------------l~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 265 FWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAG------------LHWPERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHH------------HhCcccccEEEEeccc
Confidence 233456777788876532 5688999999999999999 45999 7888887763
No 157
>PLN02209 serine carboxypeptidase
Probab=98.61 E-value=2.2e-05 Score=66.68 Aligned_cols=139 Identities=17% Similarity=0.227 Sum_probs=87.2
Q ss_pred eeEEEeCC--CCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchh---h-------------Hhhh---
Q 020741 26 TRVSHQLP--SGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWL---P-------------FFAD--- 84 (322)
Q Consensus 26 ~~~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~---~-------------~l~~--- 84 (322)
...++++. .|..++|+..... ......|+|+++.|.++++..+. .+. + .|..
T Consensus 40 ~sGy~~v~~~~~~~lf~~f~es~------~~~~~~Pl~lWlnGGPG~SS~~g-~f~e~GP~~~~~~~~~~~~~~l~~n~~ 112 (437)
T PLN02209 40 ETGYIGIGEEENVQFFYYFIKSD------KNPQEDPLIIWLNGGPGCSCLSG-LFFENGPLALKNKVYNGSVPSLVSTTY 112 (437)
T ss_pred EEEEEEecCCCCeEEEEEEEecC------CCCCCCCEEEEECCCCcHHHhhh-HHHhcCCceeccCCCCCCcccceeCCC
Confidence 44566664 3678899888744 33456899999999987776652 111 0 1111
Q ss_pred ---CCceEEEeC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC------C-CCcEEEEechhHHHHHHHHHHHhhhh
Q 020741 85 ---SGFDCYAVS-LLGQGESDAPPGTVAGSLQTHAGDVADFIQKNL------S-LPPVLLGHSFGGLIIQYYIARIRNEK 153 (322)
Q Consensus 85 ---~g~~v~~~D-~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~------~-~~~~lvG~S~Gg~~a~~~a~~~~~~~ 153 (322)
+-.+++.+| ..|.|.|.........+-++.++|+.++|+..+ . .+++|.|.|+||..+-.+|..+.+..
T Consensus 113 sW~~~anllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~ 192 (437)
T PLN02209 113 SWTKTANIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGN 192 (437)
T ss_pred chhhcCcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhc
Confidence 125799999 558898864433112233345677777776433 2 58999999999999888887764321
Q ss_pred hccccCCCCC--cceEEEeccCC
Q 020741 154 MLEMETPYPE--IAGAVLVCSVP 174 (322)
Q Consensus 154 ~~~~~~~~p~--v~~~vl~~~~~ 174 (322)
.. ...+. ++++++.++..
T Consensus 193 ~~---~~~~~inl~Gi~igng~t 212 (437)
T PLN02209 193 YI---CCNPPINLQGYVLGNPIT 212 (437)
T ss_pred cc---ccCCceeeeeEEecCccc
Confidence 00 01223 78888888753
No 158
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.59 E-value=1.4e-06 Score=67.64 Aligned_cols=128 Identities=20% Similarity=0.168 Sum_probs=81.4
Q ss_pred eeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchh--hHhhh-CCceEEEeCC-C------
Q 020741 26 TRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWL--PFFAD-SGFDCYAVSL-L------ 95 (322)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~--~~l~~-~g~~v~~~D~-~------ 95 (322)
...++.. +|.+..|+.+-|+ ...++.|.||.+||..++..-+. ... +.|++ .||-|+.+|- +
T Consensus 36 ~~~s~~~-~g~~r~y~l~vP~------g~~~~apLvv~LHG~~~sgag~~-~~sg~d~lAd~~gFlV~yPdg~~~~wn~~ 107 (312)
T COG3509 36 SVASFDV-NGLKRSYRLYVPP------GLPSGAPLVVVLHGSGGSGAGQL-HGTGWDALADREGFLVAYPDGYDRAWNAN 107 (312)
T ss_pred Ccccccc-CCCccceEEEcCC------CCCCCCCEEEEEecCCCChHHhh-cccchhhhhcccCcEEECcCccccccCCC
Confidence 3445556 8889999999976 33445589999999988876664 333 44544 5899999952 2
Q ss_pred CCCCCCCCCC--CCCCCHHHHHHHHHHHHHHhCC---CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEE
Q 020741 96 GQGESDAPPG--TVAGSLQTHAGDVADFIQKNLS---LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVL 169 (322)
Q Consensus 96 G~G~S~~~~~--~~~~~~~~~~~dl~~~l~~~~~---~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl 169 (322)
+.|.+..+.. ....+...+.+-+..++. ..+ .+|++.|.|-||.++..++.. +|+ +.++..
T Consensus 108 ~~~~~~~p~~~~~g~ddVgflr~lva~l~~-~~gidp~RVyvtGlS~GG~Ma~~lac~------------~p~~faa~A~ 174 (312)
T COG3509 108 GCGNWFGPADRRRGVDDVGFLRALVAKLVN-EYGIDPARVYVTGLSNGGRMANRLACE------------YPDIFAAIAP 174 (312)
T ss_pred cccccCCcccccCCccHHHHHHHHHHHHHH-hcCcCcceEEEEeeCcHHHHHHHHHhc------------Ccccccceee
Confidence 2223322221 011122222222333333 333 589999999999999999954 898 777777
Q ss_pred eccCC
Q 020741 170 VCSVP 174 (322)
Q Consensus 170 ~~~~~ 174 (322)
+++..
T Consensus 175 VAg~~ 179 (312)
T COG3509 175 VAGLL 179 (312)
T ss_pred eeccc
Confidence 77654
No 159
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.56 E-value=1.3e-05 Score=68.12 Aligned_cols=140 Identities=18% Similarity=0.189 Sum_probs=85.1
Q ss_pred eeEEEeCCC--CceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcc---c--chh----------hHhhh----
Q 020741 26 TRVSHQLPS--GLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWA---E--HWL----------PFFAD---- 84 (322)
Q Consensus 26 ~~~~~~~~~--g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~---~--~~~----------~~l~~---- 84 (322)
...++++.+ +..++|+..... ......|.||++.|.++++..+. + ++. ..|..
T Consensus 38 ~sGy~~v~~~~~~~lfy~f~es~------~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~s 111 (433)
T PLN03016 38 ETGYIGIGEDENVQFFYYFIKSE------NNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYS 111 (433)
T ss_pred EEEEEEecCCCCeEEEEEEEecC------CCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCc
Confidence 455666643 578899888744 23457899999999987766331 0 110 01111
Q ss_pred --CCceEEEeC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-------CCCcEEEEechhHHHHHHHHHHHhhhhh
Q 020741 85 --SGFDCYAVS-LLGQGESDAPPGTVAGSLQTHAGDVADFIQKNL-------SLPPVLLGHSFGGLIIQYYIARIRNEKM 154 (322)
Q Consensus 85 --~g~~v~~~D-~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~-------~~~~~lvG~S~Gg~~a~~~a~~~~~~~~ 154 (322)
+-.+++.+| .-|.|.|.........+-.+.++++..+|...+ ..+++|.|.|+||..+-.+|..+.+...
T Consensus 112 W~~~anllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~ 191 (433)
T PLN03016 112 WTKMANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNY 191 (433)
T ss_pred hhhcCcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcc
Confidence 126799999 558999865443111111233356666555332 2789999999999998888877643210
Q ss_pred ccccCCCC--CcceEEEeccCC
Q 020741 155 LEMETPYP--EIAGAVLVCSVP 174 (322)
Q Consensus 155 ~~~~~~~p--~v~~~vl~~~~~ 174 (322)
. ...+ +++++++-++..
T Consensus 192 ~---~~~~~inLkGi~iGNg~t 210 (433)
T PLN03016 192 I---CCEPPINLQGYMLGNPVT 210 (433)
T ss_pred c---ccCCcccceeeEecCCCc
Confidence 0 0012 378888888743
No 160
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.53 E-value=1.8e-05 Score=64.32 Aligned_cols=109 Identities=15% Similarity=0.135 Sum_probs=67.6
Q ss_pred CCCCCcEEEEcCCCcchhh--cccchhhHhhhCCceEEEeCCCCC--CCCCCC----------C----CCCC--------
Q 020741 55 NEKRPPLVFVHGSYHAAWC--WAEHWLPFFADSGFDCYAVSLLGQ--GESDAP----------P----GTVA-------- 108 (322)
Q Consensus 55 ~~~~~~vl~~HG~~~~~~~--~~~~~~~~l~~~g~~v~~~D~~G~--G~S~~~----------~----~~~~-------- 108 (322)
.+....||++||.+.+... ....+...|.+.|+.++++.+|.- ...... . ....
T Consensus 84 ~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 163 (310)
T PF12048_consen 84 AKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASA 163 (310)
T ss_pred CCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccc
Confidence 3466799999999877632 223567788889999999988861 100000 0 0000
Q ss_pred ---CCHHHHHHH----HHHHHHH--hCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccC
Q 020741 109 ---GSLQTHAGD----VADFIQK--NLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSV 173 (322)
Q Consensus 109 ---~~~~~~~~d----l~~~l~~--~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~ 173 (322)
.....+.+. +.+.+.. ..+ .+++|+||+.|+..++.+..+ ..-+.+.++|+|++.
T Consensus 164 ~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~----------~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 164 QEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAE----------KPPPMPDALVLINAY 228 (310)
T ss_pred cHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhc----------CCCcccCeEEEEeCC
Confidence 011122222 2222221 224 559999999999999999976 234448999999974
No 161
>PLN02606 palmitoyl-protein thioesterase
Probab=98.52 E-value=8.6e-06 Score=64.27 Aligned_cols=102 Identities=21% Similarity=0.243 Sum_probs=68.1
Q ss_pred CCCcEEEEcCCC--cchhhcccchhhHhhh-CCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--hCCCCcE
Q 020741 57 KRPPLVFVHGSY--HAAWCWAEHWLPFFAD-SGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQK--NLSLPPV 131 (322)
Q Consensus 57 ~~~~vl~~HG~~--~~~~~~~~~~~~~l~~-~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~--~~~~~~~ 131 (322)
...|||+.||++ ++...+. .+.+.+.+ .|+.+.++. .|-+ .... .-....++++.+.+.|.+ .+..-++
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~-~~~~~i~~~~~~pg~~v~-ig~~---~~~s-~~~~~~~Qv~~vce~l~~~~~L~~G~n 98 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVS-NLTQFLINHSGYPGTCVE-IGNG---VQDS-LFMPLRQQASIACEKIKQMKELSEGYN 98 (306)
T ss_pred CCCCEEEECCCCcccCCchHH-HHHHHHHhCCCCCeEEEE-ECCC---cccc-cccCHHHHHHHHHHHHhcchhhcCceE
Confidence 456899999998 4444554 56666642 366555554 2211 1111 224667777777777763 2235699
Q ss_pred EEEechhHHHHHHHHHHHhhhhhccccCCC-CCcceEEEeccCC
Q 020741 132 LLGHSFGGLIIQYYIARIRNEKMLEMETPY-PEIAGAVLVCSVP 174 (322)
Q Consensus 132 lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~-p~v~~~vl~~~~~ 174 (322)
++|+|.||.+.-.++++ ... |.|..+|.+++..
T Consensus 99 aIGfSQGglflRa~ier----------c~~~p~V~nlISlggph 132 (306)
T PLN02606 99 IVAESQGNLVARGLIEF----------CDNAPPVINYVSLGGPH 132 (306)
T ss_pred EEEEcchhHHHHHHHHH----------CCCCCCcceEEEecCCc
Confidence 99999999999999987 334 6699999999753
No 162
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.51 E-value=7.4e-07 Score=68.68 Aligned_cols=90 Identities=19% Similarity=0.293 Sum_probs=52.4
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhC--CceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---C---C
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADS--GFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNL---S---L 128 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~--g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~---~---~ 128 (322)
+.-.|||+||+.++...|. .+...+... .+.-..+...++....... ..+++..++.+.+.|.+.+ . .
T Consensus 3 ~~hLvV~vHGL~G~~~d~~-~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T---~~gI~~~g~rL~~eI~~~~~~~~~~~~ 78 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMR-YLKNHLEKIPEDLPNARIVVLGYSNNEFKT---FDGIDVCGERLAEEILEHIKDYESKIR 78 (217)
T ss_pred CCEEEEEeCCCCCCHHHHH-HHHHHHHHhhhhcchhhhhhhccccccccc---chhhHHHHHHHHHHHHHhccccccccc
Confidence 5568999999999999986 666666551 1221122222221111111 1345555555444433232 2 3
Q ss_pred CcEEEEechhHHHHHHHHHHHh
Q 020741 129 PPVLLGHSFGGLIIQYYIARIR 150 (322)
Q Consensus 129 ~~~lvG~S~Gg~~a~~~a~~~~ 150 (322)
++.+|||||||.++-.+.....
T Consensus 79 ~IsfIgHSLGGli~r~al~~~~ 100 (217)
T PF05057_consen 79 KISFIGHSLGGLIARYALGLLH 100 (217)
T ss_pred cceEEEecccHHHHHHHHHHhh
Confidence 7999999999999987776543
No 163
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.39 E-value=1.1e-06 Score=69.76 Aligned_cols=123 Identities=14% Similarity=0.099 Sum_probs=72.0
Q ss_pred CceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcc-cchhhHhhhCC----ceEEEeCCCCCCCC--CCC----
Q 020741 35 GLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWA-EHWLPFFADSG----FDCYAVSLLGQGES--DAP---- 103 (322)
Q Consensus 35 g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~-~~~~~~l~~~g----~~v~~~D~~G~G~S--~~~---- 103 (322)
|....+..+-|+ .-...+.-|+|+++||.......+. ......+.+.| .-+++++..+.+.. ...
T Consensus 5 g~~~~~~VylP~----~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~ 80 (251)
T PF00756_consen 5 GRDRRVWVYLPP----GYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAG 80 (251)
T ss_dssp TEEEEEEEEECT----TGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBC
T ss_pred CCeEEEEEEECC----CCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccc
Confidence 445556666554 1123356689999999732222221 11233333332 34566665554411 000
Q ss_pred -----CC-CCCCC-HHHHHHHHHHHHHHhCC---CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEecc
Q 020741 104 -----PG-TVAGS-LQTHAGDVADFIQKNLS---LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCS 172 (322)
Q Consensus 104 -----~~-~~~~~-~~~~~~dl~~~l~~~~~---~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~ 172 (322)
.. ..... .+-+.++|..+|++.+. .+..|+|+||||..|+.++.+ +|+ +.+++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~------------~Pd~F~~~~~~S~ 148 (251)
T PF00756_consen 81 SSRRADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALR------------HPDLFGAVIAFSG 148 (251)
T ss_dssp TTCBCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHH------------STTTESEEEEESE
T ss_pred cccccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHh------------CccccccccccCc
Confidence 00 00112 23455688888887776 237999999999999999955 999 889888887
Q ss_pred C
Q 020741 173 V 173 (322)
Q Consensus 173 ~ 173 (322)
.
T Consensus 149 ~ 149 (251)
T PF00756_consen 149 A 149 (251)
T ss_dssp E
T ss_pred c
Confidence 4
No 164
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.38 E-value=7e-05 Score=61.38 Aligned_cols=110 Identities=13% Similarity=0.178 Sum_probs=68.2
Q ss_pred CCCCcEEEEcCCCcchhhcc------cchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-C
Q 020741 56 EKRPPLVFVHGSYHAAWCWA------EHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-L 128 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~------~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~ 128 (322)
++.|+||++||+|-...... ..+...|. ...++++|+.-... .........-+.+.++-...+++ ..+ +
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~-~~~~~~yPtQL~qlv~~Y~~Lv~-~~G~~ 195 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSS-DEHGHKYPTQLRQLVATYDYLVE-SEGNK 195 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEecccccc-ccCCCcCchHHHHHHHHHHHHHh-ccCCC
Confidence 46799999999864433222 11233333 35888999864320 00111112345555555566665 446 8
Q ss_pred CcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCC
Q 020741 129 PPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPP 175 (322)
Q Consensus 129 ~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~ 175 (322)
+|+|+|-|.||.+++.++..+.+.. ..|-.+++|+++|...
T Consensus 196 nI~LmGDSAGGnL~Ls~LqyL~~~~------~~~~Pk~~iLISPWv~ 236 (374)
T PF10340_consen 196 NIILMGDSAGGNLALSFLQYLKKPN------KLPYPKSAILISPWVN 236 (374)
T ss_pred eEEEEecCccHHHHHHHHHHHhhcC------CCCCCceeEEECCCcC
Confidence 9999999999999999987765421 1123579999998643
No 165
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.36 E-value=1.6e-06 Score=71.31 Aligned_cols=101 Identities=24% Similarity=0.254 Sum_probs=72.1
Q ss_pred CCcEEEEcCCCcchhhcccchhhHhhhCCce---EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEE
Q 020741 58 RPPLVFVHGSYHAAWCWAEHWLPFFADSGFD---CYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LPPVLL 133 (322)
Q Consensus 58 ~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~---v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lv 133 (322)
.-+++++||++.+...|. .+...+...|+. ++.+++++. ...... ....++...-+.+.+. ..+ +++.++
T Consensus 59 ~~pivlVhG~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~---~~~~~ql~~~V~~~l~-~~ga~~v~Li 132 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFL-PLDYRLAILGWLTNGVYAFELSGG-DGTYSL---AVRGEQLFAYVDEVLA-KTGAKKVNLI 132 (336)
T ss_pred CceEEEEccCcCCcchhh-hhhhhhcchHHHhccccccccccc-CCCccc---cccHHHHHHHHHHHHh-hcCCCceEEE
Confidence 458999999988888886 666667776777 888888865 111111 2345555556666666 556 899999
Q ss_pred EechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCC
Q 020741 134 GHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVP 174 (322)
Q Consensus 134 G~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~ 174 (322)
|||+||.++..++.. ...+. |+.++.++++.
T Consensus 133 gHS~GG~~~ry~~~~----------~~~~~~V~~~~tl~tp~ 164 (336)
T COG1075 133 GHSMGGLDSRYYLGV----------LGGANRVASVVTLGTPH 164 (336)
T ss_pred eecccchhhHHHHhh----------cCccceEEEEEEeccCC
Confidence 999999999988855 12225 89999998754
No 166
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.34 E-value=2.5e-05 Score=59.55 Aligned_cols=57 Identities=23% Similarity=0.246 Sum_probs=45.8
Q ss_pred EEEEeeCCCCccChhhHHHHhhhc-CceeEEecCCcccce-eccchhhhHHHHHHHHhhhc
Q 020741 263 VLVLGAKDDFIVDAQGLSETGSFY-GVLPVCVEGVAHDMM-LDCSWEKGASVILSWLDGLR 321 (322)
Q Consensus 263 vl~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~-~~~~~~~~~~~i~~fl~~~~ 321 (322)
+.++.+++|..+|......+.+.. ++++..++ +||..- +.+. +++-..|.+-|++++
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~-dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQ-DLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehhc-hHHHHHHHHHHHhhh
Confidence 567789999999998888888877 58988888 599743 4455 789999999888764
No 167
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.33 E-value=3.2e-05 Score=58.30 Aligned_cols=80 Identities=13% Similarity=0.120 Sum_probs=53.8
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCce-EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEE
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFD-CYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LPPVLLG 134 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~-v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG 134 (322)
++..|||..|+|.+...+. ++. + ..++. ++++|+|-. +++. | ..+ +.+.|||
T Consensus 10 ~~~LilfF~GWg~d~~~f~-hL~--~-~~~~D~l~~yDYr~l------------~~d~---~-------~~~y~~i~lvA 63 (213)
T PF04301_consen 10 GKELILFFAGWGMDPSPFS-HLI--L-PENYDVLICYDYRDL------------DFDF---D-------LSGYREIYLVA 63 (213)
T ss_pred CCeEEEEEecCCCChHHhh-hcc--C-CCCccEEEEecCccc------------cccc---c-------cccCceEEEEE
Confidence 4578999999999988775 442 1 22355 457788722 2210 1 123 8899999
Q ss_pred echhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCCC
Q 020741 135 HSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVPP 175 (322)
Q Consensus 135 ~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~~ 175 (322)
+|||-.+|..+.. ...+...+.+++.+.
T Consensus 64 WSmGVw~A~~~l~-------------~~~~~~aiAINGT~~ 91 (213)
T PF04301_consen 64 WSMGVWAANRVLQ-------------GIPFKRAIAINGTPY 91 (213)
T ss_pred EeHHHHHHHHHhc-------------cCCcceeEEEECCCC
Confidence 9999999988762 223777788887653
No 168
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.31 E-value=2.3e-05 Score=61.97 Aligned_cols=102 Identities=16% Similarity=0.205 Sum_probs=68.8
Q ss_pred CCCcEEEEcCCCcchhhcc-cchhhHhhh-CCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--CCCCcEE
Q 020741 57 KRPPLVFVHGSYHAAWCWA-EHWLPFFAD-SGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKN--LSLPPVL 132 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~-~~~~~~l~~-~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~--~~~~~~l 132 (322)
...|+|+.||+|.+...-. ..+.+.+.+ .|..+.++.. |.+. ..+.-....++++.+.+.|.+. +..-+++
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~--~~s~~~~~~~Qve~vce~l~~~~~l~~G~na 98 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGV--GDSWLMPLTQQAEIACEKVKQMKELSQGYNI 98 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCc--cccceeCHHHHHHHHHHHHhhchhhhCcEEE
Confidence 5568999999986654311 134444533 2666666654 3332 2223456778888777777632 2356999
Q ss_pred EEechhHHHHHHHHHHHhhhhhccccCCC-CCcceEEEeccC
Q 020741 133 LGHSFGGLIIQYYIARIRNEKMLEMETPY-PEIAGAVLVCSV 173 (322)
Q Consensus 133 vG~S~Gg~~a~~~a~~~~~~~~~~~~~~~-p~v~~~vl~~~~ 173 (322)
+|+|.||.++-.++++ ... |.|..+|.+++.
T Consensus 99 IGfSQGGlflRa~ier----------c~~~p~V~nlISlggp 130 (314)
T PLN02633 99 VGRSQGNLVARGLIEF----------CDGGPPVYNYISLAGP 130 (314)
T ss_pred EEEccchHHHHHHHHH----------CCCCCCcceEEEecCC
Confidence 9999999999999987 333 669999999975
No 169
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=98.30 E-value=6.4e-05 Score=58.29 Aligned_cols=111 Identities=11% Similarity=0.031 Sum_probs=76.2
Q ss_pred CCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEe
Q 020741 56 EKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLPPVLLGH 135 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~lvG~ 135 (322)
...|.||++-.+.+........-.+.|... ..|+..|+----.-+.... .++++++.+.+.+.|. .+|..+++++.
T Consensus 101 ~pdPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~G--~FdldDYIdyvie~~~-~~Gp~~hv~aV 176 (415)
T COG4553 101 KPDPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPLEAG--HFDLDDYIDYVIEMIN-FLGPDAHVMAV 176 (415)
T ss_pred CCCCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeecccC--CccHHHHHHHHHHHHH-HhCCCCcEEEE
Confidence 456788888887655443333445666554 6888888864433333333 6899999999999999 89977999999
Q ss_pred chhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCCC
Q 020741 136 SFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPSG 177 (322)
Q Consensus 136 S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~~ 177 (322)
|.=+.-.+.+.+-... ...|. ...+++++++....
T Consensus 177 CQP~vPvLAAisLM~~-------~~~p~~PssMtlmGgPIDaR 212 (415)
T COG4553 177 CQPTVPVLAAISLMEE-------DGDPNVPSSMTLMGGPIDAR 212 (415)
T ss_pred ecCCchHHHHHHHHHh-------cCCCCCCceeeeecCccccc
Confidence 9887766655543333 34776 67888888765443
No 170
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.25 E-value=0.00012 Score=63.44 Aligned_cols=132 Identities=16% Similarity=0.164 Sum_probs=87.2
Q ss_pred eeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcc-hhhcccchhhHhhhCCceEEEeCCCCCCCCCCCC
Q 020741 26 TRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHA-AWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPP 104 (322)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~-~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~ 104 (322)
++.+++..||+++.+...-.+ ....+.+.|.+|..-|.-+. ...+.....-.|.++||-....--||=|.-...-
T Consensus 420 ~riwa~a~dgv~VPVSLvyrk----d~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~W 495 (682)
T COG1770 420 RRIWATADDGVQVPVSLVYRK----DTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAW 495 (682)
T ss_pred EEEEEEcCCCcEeeEEEEEec----ccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHH
Confidence 456677689987777555432 01223577888888876333 2222212333566889888778888866443211
Q ss_pred ------CCCCCCHHHHHHHHHHHHHHhCC--CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccC
Q 020741 105 ------GTVAGSLQTHAGDVADFIQKNLS--LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSV 173 (322)
Q Consensus 105 ------~~~~~~~~~~~~dl~~~l~~~~~--~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~ 173 (322)
.....++.++.+....++++... +.++++|-|.||++.-..+.+ .|+ +.++|+--|.
T Consensus 496 Ye~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~------------~P~lf~~iiA~VPF 561 (682)
T COG1770 496 YEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANM------------APDLFAGIIAQVPF 561 (682)
T ss_pred HHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhh------------ChhhhhheeecCCc
Confidence 02246888888888888886555 679999999999999999955 888 6777665553
No 171
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.23 E-value=1.5e-05 Score=58.62 Aligned_cols=122 Identities=12% Similarity=0.123 Sum_probs=71.6
Q ss_pred CceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccc--hhhHhhhCCceEEEeCC--CCCC---CCCCCCC--
Q 020741 35 GLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEH--WLPFFADSGFDCYAVSL--LGQG---ESDAPPG-- 105 (322)
Q Consensus 35 g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~--~~~~l~~~g~~v~~~D~--~G~G---~S~~~~~-- 105 (322)
+..+.+-.+-|+ ..+.++.-|++.++-|+.++...+.+. +...-+++|+.|+.+|- ||.. .++.-.-
T Consensus 25 ~c~Mtf~vylPp----~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~ 100 (283)
T KOG3101|consen 25 KCSMTFGVYLPP----DAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQ 100 (283)
T ss_pred ccceEEEEecCC----CcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccC
Confidence 345566666655 234445578999999998887766522 33445567999999995 4431 1111000
Q ss_pred -------------CCCCCHH-HHHHHHHHHHHHh---CC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cce
Q 020741 106 -------------TVAGSLQ-THAGDVADFIQKN---LS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAG 166 (322)
Q Consensus 106 -------------~~~~~~~-~~~~dl~~~l~~~---~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~ 166 (322)
...|.+- -.++.+.+.++.. +. .++.+.||||||.=|+..+ +++|. .++
T Consensus 101 GAGFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~------------Lkn~~kykS 168 (283)
T KOG3101|consen 101 GAGFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIY------------LKNPSKYKS 168 (283)
T ss_pred CceeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEE------------EcCcccccc
Confidence 0011111 1233445555411 12 5688999999999999888 44666 555
Q ss_pred EEEecc
Q 020741 167 AVLVCS 172 (322)
Q Consensus 167 ~vl~~~ 172 (322)
+-..+|
T Consensus 169 vSAFAP 174 (283)
T KOG3101|consen 169 VSAFAP 174 (283)
T ss_pred eecccc
Confidence 555444
No 172
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.17 E-value=1.5e-05 Score=63.97 Aligned_cols=113 Identities=17% Similarity=0.083 Sum_probs=65.6
Q ss_pred CCCCcEEEEcCCCcchhhcccchhhHhhhCC--ceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH---HhCC-CC
Q 020741 56 EKRPPLVFVHGSYHAAWCWAEHWLPFFADSG--FDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQ---KNLS-LP 129 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g--~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~---~~~~-~~ 129 (322)
..+..+||+||+..+-..-....++-....| ...+.+.+|..|.--.-.. ...+...-..+++.+|+ +..+ ++
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~-DreS~~~Sr~aLe~~lr~La~~~~~~~ 192 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNY-DRESTNYSRPALERLLRYLATDKPVKR 192 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeeccc-chhhhhhhHHHHHHHHHHHHhCCCCce
Confidence 4678899999986543321112333333333 4678889997665322111 11223333344555554 1334 78
Q ss_pred cEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEecc
Q 020741 130 PVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCS 172 (322)
Q Consensus 130 ~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~ 172 (322)
|+|++||||.++++....++.-+..+. ....++.+|+.+|
T Consensus 193 I~ilAHSMGtwl~~e~LrQLai~~~~~---l~~ki~nViLAaP 232 (377)
T COG4782 193 IYLLAHSMGTWLLMEALRQLAIRADRP---LPAKIKNVILAAP 232 (377)
T ss_pred EEEEEecchHHHHHHHHHHHhccCCcc---hhhhhhheEeeCC
Confidence 999999999999999998865442110 1122667777655
No 173
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.14 E-value=1.6e-05 Score=62.32 Aligned_cols=106 Identities=16% Similarity=0.264 Sum_probs=55.2
Q ss_pred CCCcEEEEcCCCcchh---hcccchhhHhhh--CCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--CCCC
Q 020741 57 KRPPLVFVHGSYHAAW---CWAEHWLPFFAD--SGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKN--LSLP 129 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~---~~~~~~~~~l~~--~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~--~~~~ 129 (322)
+..|||+.||+|.+.. .+. .+.+.+.+ -|.-|.+++.- -+.+.....+.-....+.++.+.+.|... +..-
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~-~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G 81 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMG-SIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELANG 81 (279)
T ss_dssp SS--EEEE--TT--S--TTTHH-HHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-
T ss_pred CCCcEEEEEcCccccCChhHHH-HHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcc
Confidence 5678999999986542 332 33333333 26777777762 21110000001124556666666666632 3366
Q ss_pred cEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCC
Q 020741 130 PVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVP 174 (322)
Q Consensus 130 ~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~ 174 (322)
++++|+|.||.+.-.++++ ...|.|..+|.+++..
T Consensus 82 ~~~IGfSQGgl~lRa~vq~----------c~~~~V~nlISlggph 116 (279)
T PF02089_consen 82 FNAIGFSQGGLFLRAYVQR----------CNDPPVHNLISLGGPH 116 (279)
T ss_dssp EEEEEETCHHHHHHHHHHH-----------TSS-EEEEEEES--T
T ss_pred eeeeeeccccHHHHHHHHH----------CCCCCceeEEEecCcc
Confidence 9999999999999999987 3345599999999753
No 174
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.14 E-value=6.1e-06 Score=72.20 Aligned_cols=132 Identities=16% Similarity=0.156 Sum_probs=75.1
Q ss_pred eeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccchhhHhh----------------hCCceE
Q 020741 26 TRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEHWLPFFA----------------DSGFDC 89 (322)
Q Consensus 26 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~~~~~l~----------------~~g~~v 89 (322)
..+.-+..+-+.++.+..|... -.......++-+|+|++|..|+-..-+ .++.... ...|+.
T Consensus 58 ~~r~t~~a~kY~LYLY~Egs~~-~e~~~lelsGIPVLFIPGNAGSyKQvR-SiAS~a~n~y~~~~~e~t~~~d~~~~~DF 135 (973)
T KOG3724|consen 58 PERLTPQADKYSLYLYREGSRW-WERSTLELSGIPVLFIPGNAGSYKQVR-SIASVAQNAYQGGPFEKTEDRDNPFSFDF 135 (973)
T ss_pred cccccCCCCceEEEEecccccc-cccccccCCCceEEEecCCCCchHHHH-HHHHHHhhhhcCCchhhhhcccCccccce
Confidence 3344455566666665555320 001122347789999999987765544 3333222 113567
Q ss_pred EEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-------------CCCcEEEEechhHHHHHHHHHHHhhhhhcc
Q 020741 90 YAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNL-------------SLPPVLLGHSFGGLIIQYYIARIRNEKMLE 156 (322)
Q Consensus 90 ~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~-------------~~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~ 156 (322)
.++|+-+ .-...+..+..++++-+.+.|...+ +..|+++||||||++|...+.- +
T Consensus 136 FaVDFnE-----e~tAm~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tl-k------ 203 (973)
T KOG3724|consen 136 FAVDFNE-----EFTAMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTL-K------ 203 (973)
T ss_pred EEEcccc-----hhhhhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhh-h------
Confidence 7777642 1111233567777777766665332 1348999999999999888732 1
Q ss_pred ccCCCCC-cceEEEeccC
Q 020741 157 METPYPE-IAGAVLVCSV 173 (322)
Q Consensus 157 ~~~~~p~-v~~~vl~~~~ 173 (322)
...++ |.-++.++++
T Consensus 204 --n~~~~sVntIITlssP 219 (973)
T KOG3724|consen 204 --NEVQGSVNTIITLSSP 219 (973)
T ss_pred --hhccchhhhhhhhcCc
Confidence 11333 6666666653
No 175
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.14 E-value=1.8e-05 Score=69.48 Aligned_cols=105 Identities=14% Similarity=0.090 Sum_probs=61.6
Q ss_pred CCCCcEEEEcCCC---cchhhcccchhhHhhhC-C-ceEEEeCCC-C---CCCCCCCCCCCCCCHHHH---HHHHHHHHH
Q 020741 56 EKRPPLVFVHGSY---HAAWCWAEHWLPFFADS-G-FDCYAVSLL-G---QGESDAPPGTVAGSLQTH---AGDVADFIQ 123 (322)
Q Consensus 56 ~~~~~vl~~HG~~---~~~~~~~~~~~~~l~~~-g-~~v~~~D~~-G---~G~S~~~~~~~~~~~~~~---~~dl~~~l~ 123 (322)
+..|+||++||.+ ++...+ ....|... + +.|+++++| | +..+..........+.+. .+.+.+.|+
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~---~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~ 169 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY---PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIA 169 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC---ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHH
Confidence 4679999999964 222222 23344443 3 899999999 3 333322111112233333 333444454
Q ss_pred HhCC---CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCC
Q 020741 124 KNLS---LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVP 174 (322)
Q Consensus 124 ~~~~---~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~ 174 (322)
..+ .+|.|+|+|.||..+..++.. ...+. +.++|+.++..
T Consensus 170 -~fggd~~~v~~~G~SaG~~~~~~~~~~----------~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 170 -AFGGDPDSVTIFGESAGGASVSLLLLS----------PDSKGLFHRAISQSGSA 213 (493)
T ss_pred -HhCCCcceEEEEeecHHHHHhhhHhhC----------cchhHHHHHHhhhcCCc
Confidence 333 789999999999999888843 11223 77888877644
No 176
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.10 E-value=3.2e-05 Score=65.96 Aligned_cols=235 Identities=14% Similarity=0.095 Sum_probs=131.3
Q ss_pred CceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcch--hhcccchhhHhhhCCceEEEeCCCCCCCCC
Q 020741 24 GQTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAA--WCWAEHWLPFFADSGFDCYAVSLLGQGESD 101 (322)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~--~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~ 101 (322)
..++.+.++.||++|.|...+ + ....+ +.|++|+--|...-+ -.|. .......++|...+..+.||=|.=.
T Consensus 393 ~veQ~~atSkDGT~IPYFiv~-K----~~~~d-~~pTll~aYGGF~vsltP~fs-~~~~~WLerGg~~v~ANIRGGGEfG 465 (648)
T COG1505 393 EVEQFFATSKDGTRIPYFIVR-K----GAKKD-ENPTLLYAYGGFNISLTPRFS-GSRKLWLERGGVFVLANIRGGGEFG 465 (648)
T ss_pred eEEEEEEEcCCCccccEEEEe-c----CCcCC-CCceEEEeccccccccCCccc-hhhHHHHhcCCeEEEEecccCCccC
Confidence 347788888899999999986 3 01122 577777766653222 2233 3446666889999999999977543
Q ss_pred CCCC------CCCCCHHHHHHHHHHHHHHhCC--CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccC
Q 020741 102 APPG------TVAGSLQTHAGDVADFIQKNLS--LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSV 173 (322)
Q Consensus 102 ~~~~------~~~~~~~~~~~dl~~~l~~~~~--~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~ 173 (322)
..-. ....-+++++.-+.+++++-.. +++.+.|-|-||.+.-.+. .++|++-+.+++.-+
T Consensus 466 p~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~al------------TQrPelfgA~v~evP 533 (648)
T COG1505 466 PEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAAL------------TQRPELFGAAVCEVP 533 (648)
T ss_pred HHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeee------------ccChhhhCceeeccc
Confidence 3211 1233455555556666664443 6789999999999988877 459996666555432
Q ss_pred CCCCCCcchhhhhhccchhhhHHHHHHhHhhhccccccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCC
Q 020741 174 PPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDLSLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPV 253 (322)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (322)
... ++.. ..+ .. -..+... +.+.-.++...... ...+.
T Consensus 534 llD--------MlRY----------h~l---~a--G~sW~~E-YG~Pd~P~d~~~l~------------------~YSPy 571 (648)
T COG1505 534 LLD--------MLRY----------HLL---TA--GSSWIAE-YGNPDDPEDRAFLL------------------AYSPY 571 (648)
T ss_pred hhh--------hhhh----------ccc---cc--chhhHhh-cCCCCCHHHHHHHH------------------hcCch
Confidence 100 0000 000 00 0000011 12222333333211 11121
Q ss_pred CCCC--CccccEEEEeeCCCCccChhhHHHHhhhcC---ceeEEe--cCCcccceeccch-hhhHHHHHHHHhh
Q 020741 254 PSVP--KSSIKVLVLGAKDDFIVDAQGLSETGSFYG---VLPVCV--EGVAHDMMLDCSW-EKGASVILSWLDG 319 (322)
Q Consensus 254 ~~~~--~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~--~~~gH~~~~~~~~-~~~~~~i~~fl~~ 319 (322)
..++ ..=.|+||-.+..|.-|.|.++++++..+. .....+ -++||..--+... ..-...+..||.+
T Consensus 572 ~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r 645 (648)
T COG1505 572 HNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREETKGGHGGAAPTAEIARELADLLAFLLR 645 (648)
T ss_pred hcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHH
Confidence 2222 223589999999999999988888877662 333333 3589987655430 1222344556654
No 177
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.08 E-value=2.5e-05 Score=67.28 Aligned_cols=105 Identities=20% Similarity=0.288 Sum_probs=63.5
Q ss_pred CCCcEEEEcCCCcchhhcc-cchhhHhhhC-CceEEEeCCCCCCCCCCCCC-----CCCCCHHHHHHHHHHHHHHh---C
Q 020741 57 KRPPLVFVHGSYHAAWCWA-EHWLPFFADS-GFDCYAVSLLGQGESDAPPG-----TVAGSLQTHAGDVADFIQKN---L 126 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~-~~~~~~l~~~-g~~v~~~D~~G~G~S~~~~~-----~~~~~~~~~~~dl~~~l~~~---~ 126 (322)
++|++|++-|=+.-...|. ..+...|+++ |--+++++.|-+|.|.+... -...+.++..+|+..+++.. .
T Consensus 28 ~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 28 GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 4566666655332222121 1244455543 77899999999999986543 23468899999998888742 1
Q ss_pred ---C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccC
Q 020741 127 ---S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSV 173 (322)
Q Consensus 127 ---~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~ 173 (322)
. .|++++|-|+||++|..+-.+ +|+ +.+.+.-+++
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~k------------yP~~~~ga~ASSap 147 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLK------------YPHLFDGAWASSAP 147 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-------------TTT-SEEEEET--
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhh------------CCCeeEEEEeccce
Confidence 2 589999999999999998854 999 6776666554
No 178
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.07 E-value=1.4e-05 Score=53.47 Aligned_cols=60 Identities=20% Similarity=0.219 Sum_probs=53.0
Q ss_pred ccccEEEEeeCCCCccChhhHHHHhhhcC-ceeEEecCCcccceeccchhhhHHHHHHHHhh
Q 020741 259 SSIKVLVLGAKDDFIVDAQGLSETGSFYG-VLPVCVEGVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 259 ~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
...|+|++.++.|+++|.+.++.+.+.++ ++++.+++.||..+.... .-+.+.+.+||..
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s-~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGS-PCVDKAVDDYLLD 93 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCC-hHHHHHHHHHHHc
Confidence 35899999999999999999999999996 999999999999986444 6788888899864
No 179
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.04 E-value=8.5e-05 Score=63.89 Aligned_cols=129 Identities=17% Similarity=0.218 Sum_probs=82.4
Q ss_pred ceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcc-h-hhcccchhhHhhhCCceEEEeCCCCCCCCCC
Q 020741 25 QTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHA-A-WCWAEHWLPFFADSGFDCYAVSLLGQGESDA 102 (322)
Q Consensus 25 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~-~-~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~ 102 (322)
..+.++...||..+.....-.+ ......++|.+|..+|..+- . -.|. .-...|.++|+-....|.||=|.-..
T Consensus 441 ~~r~~~~SkDGt~VPM~Iv~kk----~~k~dg~~P~LLygYGay~isl~p~f~-~srl~lld~G~Vla~a~VRGGGe~G~ 515 (712)
T KOG2237|consen 441 VERIEVSSKDGTKVPMFIVYKK----DIKLDGSKPLLLYGYGAYGISLDPSFR-ASRLSLLDRGWVLAYANVRGGGEYGE 515 (712)
T ss_pred EEEEEEecCCCCccceEEEEec----hhhhcCCCceEEEEecccceeeccccc-cceeEEEecceEEEEEeeccCccccc
Confidence 3677888999987666544422 12233477888888876322 2 2333 21223446898888899999765432
Q ss_pred CC--C----CCCCCHHHHHHHHHHHHHHhCC--CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEe
Q 020741 103 PP--G----TVAGSLQTHAGDVADFIQKNLS--LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLV 170 (322)
Q Consensus 103 ~~--~----~~~~~~~~~~~dl~~~l~~~~~--~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~ 170 (322)
.- . ....+++++...+.-++++-.- .++.+.|.|.||.++..++. .+|++-+++++
T Consensus 516 ~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN------------~rPdLF~avia 579 (712)
T KOG2237|consen 516 QWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACIN------------QRPDLFGAVIA 579 (712)
T ss_pred chhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhc------------cCchHhhhhhh
Confidence 21 1 1234667776666666664333 78999999999999999994 49994444443
No 180
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.98 E-value=2.5e-05 Score=65.77 Aligned_cols=85 Identities=18% Similarity=0.271 Sum_probs=56.9
Q ss_pred hcccchhhHhhhCCce-----EEE-eCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CCCcEEEEechhHHHHH
Q 020741 73 CWAEHWLPFFADSGFD-----CYA-VSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNL---SLPPVLLGHSFGGLIIQ 143 (322)
Q Consensus 73 ~~~~~~~~~l~~~g~~-----v~~-~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~---~~~~~lvG~S~Gg~~a~ 143 (322)
.|. .+++.|.+.||. ..+ +|+|-- ....++....+...|+... +.+|+|+||||||.++.
T Consensus 66 ~~~-~li~~L~~~GY~~~~~l~~~pYDWR~~----------~~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~ 134 (389)
T PF02450_consen 66 YFA-KLIENLEKLGYDRGKDLFAAPYDWRLS----------PAERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVAR 134 (389)
T ss_pred hHH-HHHHHHHhcCcccCCEEEEEeechhhc----------hhhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHH
Confidence 665 789999987874 223 788821 0123455666666665432 48999999999999999
Q ss_pred HHHHHHhhhhhccccCCCCCcceEEEeccC
Q 020741 144 YYIARIRNEKMLEMETPYPEIAGAVLVCSV 173 (322)
Q Consensus 144 ~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~ 173 (322)
.+......+. -....|+++|.++++
T Consensus 135 ~fl~~~~~~~-----W~~~~i~~~i~i~~p 159 (389)
T PF02450_consen 135 YFLQWMPQEE-----WKDKYIKRFISIGTP 159 (389)
T ss_pred HHHHhccchh-----hHHhhhhEEEEeCCC
Confidence 9997643210 012239999999875
No 181
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=97.94 E-value=0.0013 Score=54.11 Aligned_cols=85 Identities=20% Similarity=0.257 Sum_probs=54.3
Q ss_pred ceEEEeCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC------C-CCcEEEEechhHHHHHHHHHHHhhhhhcccc
Q 020741 87 FDCYAVSLL-GQGESDAPPGTVAGSLQTHAGDVADFIQKNL------S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEME 158 (322)
Q Consensus 87 ~~v~~~D~~-G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~------~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~ 158 (322)
.+++.+|.| |.|.|-........+-++.++|+..+|+..+ . .+++|.|-|+||..+-.+|..+.+....
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~--- 78 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI--- 78 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccc---
Confidence 468999988 8998865443111222234467666666432 3 7899999999999999998876432100
Q ss_pred CCCC--CcceEEEeccCC
Q 020741 159 TPYP--EIAGAVLVCSVP 174 (322)
Q Consensus 159 ~~~p--~v~~~vl~~~~~ 174 (322)
...+ .++++++-++..
T Consensus 79 ~~~~~inLkGi~IGNg~t 96 (319)
T PLN02213 79 CCEPPINLQGYMLGNPVT 96 (319)
T ss_pred ccCCceeeeEEEeCCCCC
Confidence 0012 378888877643
No 182
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.94 E-value=5.7e-05 Score=63.34 Aligned_cols=107 Identities=21% Similarity=0.199 Sum_probs=64.8
Q ss_pred CCCCcEEEEcCCC----cchhhcccchhhHhhhCC-ceEEEeCCC-C-CCC---CCCCC-C--CCCCCHHHH---HHHHH
Q 020741 56 EKRPPLVFVHGSY----HAAWCWAEHWLPFFADSG-FDCYAVSLL-G-QGE---SDAPP-G--TVAGSLQTH---AGDVA 119 (322)
Q Consensus 56 ~~~~~vl~~HG~~----~~~~~~~~~~~~~l~~~g-~~v~~~D~~-G-~G~---S~~~~-~--~~~~~~~~~---~~dl~ 119 (322)
.+.|++|+|||.+ .++..+.+ ...|+++| +-|+++++| | +|. |.... . .....+.++ .+++.
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~~yd--gs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~ 169 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEPLYD--GSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVR 169 (491)
T ss_pred CCCcEEEEEeccccccCCCcccccC--hHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHH
Confidence 4679999999963 33333332 56788887 889999987 1 121 11110 0 001233333 34556
Q ss_pred HHHHHhCC---CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCC
Q 020741 120 DFIQKNLS---LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPP 175 (322)
Q Consensus 120 ~~l~~~~~---~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~ 175 (322)
+-|+ ++| .+|.|+|+|.||+.++.+.+. -.... +.++|+.++...
T Consensus 170 ~NIe-~FGGDp~NVTl~GeSAGa~si~~Lla~----------P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 170 DNIE-AFGGDPQNVTLFGESAGAASILTLLAV----------PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHH-HhCCCccceEEeeccchHHHHHHhhcC----------ccchHHHHHHHHhCCCCC
Confidence 6677 444 679999999999998888742 11222 566677776543
No 183
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.94 E-value=0.00019 Score=59.15 Aligned_cols=60 Identities=7% Similarity=0.038 Sum_probs=51.1
Q ss_pred CCccccEEEEeeCCCCccChhhHHHHhhhcC--ceeEEecCCcccceeccchhhhHHHHHHHHhhh
Q 020741 257 PKSSIKVLVLGAKDDFIVDAQGLSETGSFYG--VLPVCVEGVAHDMMLDCSWEKGASVILSWLDGL 320 (322)
Q Consensus 257 ~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 320 (322)
.++++|.++|.|..|++..++....+...++ +.+..+|+++|.... ..+.+.+..|+..+
T Consensus 259 ~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~----~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 259 DRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG----SDVVQSLRAFYNRI 320 (367)
T ss_pred HhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch----HHHHHHHHHHHHHH
Confidence 4679999999999999999999999888884 888899999998875 46677788887654
No 184
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.93 E-value=0.00035 Score=56.85 Aligned_cols=65 Identities=18% Similarity=0.123 Sum_probs=51.0
Q ss_pred CCCcc-ccEEEEeeCCCCccChhhHHHHhhhcC---ceeEEecCCcccceeccch--hhhHHHHHHHHhhh
Q 020741 256 VPKSS-IKVLVLGAKDDFIVDAQGLSETGSFYG---VLPVCVEGVAHDMMLDCSW--EKGASVILSWLDGL 320 (322)
Q Consensus 256 ~~~~~-~Pvl~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~gH~~~~~~~~--~~~~~~i~~fl~~~ 320 (322)
+.++. +|+|+++|.+|..+|......+.+... .+...+++++|........ ++..+.+.+|+.+.
T Consensus 227 ~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 227 AEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred HhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 33455 799999999999999988888777653 5777889999988764441 37888999999765
No 185
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.93 E-value=0.00016 Score=55.54 Aligned_cols=102 Identities=18% Similarity=0.255 Sum_probs=71.5
Q ss_pred CCCcEEEEcCCCcchhh--cccchhhHhhhC-CceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--hCCCCcE
Q 020741 57 KRPPLVFVHGSYHAAWC--WAEHWLPFFADS-GFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQK--NLSLPPV 131 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~--~~~~~~~~l~~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~--~~~~~~~ 131 (322)
+..++|++||++.++.. .. .+.+.+.+. |..|++.|. |-| .....-....++++-+.+.+.. .+..-++
T Consensus 22 s~~P~ii~HGigd~c~~~~~~-~~~q~l~~~~g~~v~~lei-g~g----~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGyn 95 (296)
T KOG2541|consen 22 SPVPVIVWHGIGDSCSSLSMA-NLTQLLEELPGSPVYCLEI-GDG----IKDSSLMPLWEQVDVACEKVKQMPELSQGYN 95 (296)
T ss_pred ccCCEEEEeccCcccccchHH-HHHHHHHhCCCCeeEEEEe-cCC----cchhhhccHHHHHHHHHHHHhcchhccCceE
Confidence 33689999999877765 43 566666654 788899886 333 1111234566777766666652 2336699
Q ss_pred EEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCC
Q 020741 132 LLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVP 174 (322)
Q Consensus 132 lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~ 174 (322)
++|.|.||.++-.+++. ...|.|+..|.++++.
T Consensus 96 ivg~SQGglv~Raliq~----------cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 96 IVGYSQGGLVARALIQF----------CDNPPVKNFISLGGPH 128 (296)
T ss_pred EEEEccccHHHHHHHHh----------CCCCCcceeEeccCCc
Confidence 99999999999999976 3456699999998753
No 186
>COG3150 Predicted esterase [General function prediction only]
Probab=97.92 E-value=6.7e-05 Score=53.16 Aligned_cols=77 Identities=18% Similarity=0.238 Sum_probs=53.2
Q ss_pred EEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEechhH
Q 020741 61 LVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGG 139 (322)
Q Consensus 61 vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg 139 (322)
||++||+-+|..+....+...+-+...+.+ +.|.... ..++...++.+..+|. .++ ....|+|.|+||
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i-------~y~~p~l---~h~p~~a~~ele~~i~-~~~~~~p~ivGssLGG 70 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDI-------EYSTPHL---PHDPQQALKELEKAVQ-ELGDESPLIVGSSLGG 70 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccccce-------eeecCCC---CCCHHHHHHHHHHHHH-HcCCCCceEEeecchH
Confidence 899999988877664322222222212222 2222222 2578899999999999 566 679999999999
Q ss_pred HHHHHHHHH
Q 020741 140 LIIQYYIAR 148 (322)
Q Consensus 140 ~~a~~~a~~ 148 (322)
..|..++.+
T Consensus 71 Y~At~l~~~ 79 (191)
T COG3150 71 YYATWLGFL 79 (191)
T ss_pred HHHHHHHHH
Confidence 999999965
No 187
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.79 E-value=9.9e-05 Score=43.89 Aligned_cols=50 Identities=16% Similarity=0.310 Sum_probs=31.1
Q ss_pred CceeEEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcc
Q 020741 24 GQTRVSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWA 75 (322)
Q Consensus 24 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~ 75 (322)
+.++..+++.||.-|......+.+. ..+..+.+|+|++.||+.+++..|.
T Consensus 11 ~~E~h~V~T~DGYiL~l~RIp~~~~--~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 11 PCEEHEVTTEDGYILTLHRIPPGKN--SSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp --EEEEEE-TTSEEEEEEEE-SBTT--CTTTTTT--EEEEE--TT--GGGGC
T ss_pred CcEEEEEEeCCCcEEEEEEccCCCC--CcccCCCCCcEEEECCcccChHHHH
Confidence 3578899999999999988876510 1234457899999999999999885
No 188
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.67 E-value=0.00017 Score=64.20 Aligned_cols=105 Identities=16% Similarity=0.096 Sum_probs=59.8
Q ss_pred CCCcEEEEcCCC---cch--hhcccchhhHhhhCCceEEEeCCC----CCCCCCCCCCC-CCCCHHHHHH---HHHHHHH
Q 020741 57 KRPPLVFVHGSY---HAA--WCWAEHWLPFFADSGFDCYAVSLL----GQGESDAPPGT-VAGSLQTHAG---DVADFIQ 123 (322)
Q Consensus 57 ~~~~vl~~HG~~---~~~--~~~~~~~~~~l~~~g~~v~~~D~~----G~G~S~~~~~~-~~~~~~~~~~---dl~~~l~ 123 (322)
..|++|+|||.+ ++. ..+. -...+++++.-|+++++| |+-.+...... ..+.+.|+.. ++.+-|.
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~--~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~ 201 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYD--GASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIA 201 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGH--THHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGG
T ss_pred ccceEEEeecccccCCCccccccc--ccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhh
Confidence 569999999964 333 2222 244556678999999998 43333222211 2344545443 3444455
Q ss_pred HhCC---CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCC
Q 020741 124 KNLS---LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVP 174 (322)
Q Consensus 124 ~~~~---~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~ 174 (322)
..| ++|.|+|||.||..+...+... .... +.+.|+.++..
T Consensus 202 -~FGGDp~~VTl~G~SAGa~sv~~~l~sp----------~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 202 -AFGGDPDNVTLFGQSAGAASVSLLLLSP----------SSKGLFHRAILQSGSA 245 (535)
T ss_dssp -GGTEEEEEEEEEEETHHHHHHHHHHHGG----------GGTTSBSEEEEES--T
T ss_pred -hcccCCcceeeeeecccccccceeeecc----------cccccccccccccccc
Confidence 344 6799999999999988887541 1223 89999998753
No 189
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.51 E-value=0.0069 Score=50.22 Aligned_cols=59 Identities=12% Similarity=0.080 Sum_probs=37.8
Q ss_pred CCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchh-hcccchhhHhhhCCceEEE--eCCCCCCCC
Q 020741 34 SGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAW-CWAEHWLPFFADSGFDCYA--VSLLGQGES 100 (322)
Q Consensus 34 ~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~--~D~~G~G~S 100 (322)
...+|.|+.+-.. ....+..|+++.|+|++.. .+.+.+.+.+++. |.|++ +++-|+|.-
T Consensus 18 R~sKLEyri~ydd-------~Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~-fnvv~I~V~YHCf~~R 79 (403)
T PF11144_consen 18 RESKLEYRISYDD-------EKEIKAIVFIIPGFGADANSNYLDFMREYIAKK-FNVVVISVNYHCFCNR 79 (403)
T ss_pred ccceeeEEeecCC-------CCCceEEEEEeCCcCCCcchHHHHHHHHHHHHh-CCEEEEEeeeeheeec
Confidence 3457777775433 1234567888999998877 3444677788776 66554 566666643
No 190
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.48 E-value=0.00059 Score=55.84 Aligned_cols=100 Identities=21% Similarity=0.268 Sum_probs=68.1
Q ss_pred CcEEEEcCCCcchhhcccc--hhhHhh-hCCceEEEeCCCCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHHhC-
Q 020741 59 PPLVFVHGSYHAAWCWAEH--WLPFFA-DSGFDCYAVSLLGQGESDAPPG--------TVAGSLQTHAGDVADFIQKNL- 126 (322)
Q Consensus 59 ~~vl~~HG~~~~~~~~~~~--~~~~l~-~~g~~v~~~D~~G~G~S~~~~~--------~~~~~~~~~~~dl~~~l~~~~- 126 (322)
.+|+|--|.-++-+.|... ++-.++ +.+--++..+.|-+|+|.+-.. ....+.++..+|..++|. .+
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~-~lK 159 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLT-FLK 159 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHH-HHh
Confidence 7889999987665554311 222232 2356789999999999976543 122466677777777666 33
Q ss_pred ---C---CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEec
Q 020741 127 ---S---LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVC 171 (322)
Q Consensus 127 ---~---~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~ 171 (322)
+ .+|+.+|-|+||+++..+= +++|. +.+.+..+
T Consensus 160 ~~~~a~~~pvIafGGSYGGMLaAWfR------------lKYPHiv~GAlAaS 199 (492)
T KOG2183|consen 160 RDLSAEASPVIAFGGSYGGMLAAWFR------------LKYPHIVLGALAAS 199 (492)
T ss_pred hccccccCcEEEecCchhhHHHHHHH------------hcChhhhhhhhhcc
Confidence 2 6899999999999998887 56999 55544433
No 191
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.41 E-value=0.0018 Score=49.81 Aligned_cols=93 Identities=24% Similarity=0.213 Sum_probs=58.2
Q ss_pred CCCcEEEEcCC--CcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHH-------HHHHHhC-
Q 020741 57 KRPPLVFVHGS--YHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVA-------DFIQKNL- 126 (322)
Q Consensus 57 ~~~~vl~~HG~--~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~-------~~l~~~~- 126 (322)
...+|=|+-|. |......+..+.+.|+++||.|++.-+.- ..+-...+..+. +.+....
T Consensus 16 P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-----------tfDH~~~A~~~~~~f~~~~~~L~~~~~ 84 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-----------TFDHQAIAREVWERFERCLRALQKRGG 84 (250)
T ss_pred CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-----------CCcHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 44566677774 45555555588999999999999987641 123333333332 2222111
Q ss_pred -C---CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEecc
Q 020741 127 -S---LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCS 172 (322)
Q Consensus 127 -~---~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~ 172 (322)
. -|++-+|||+|+.+-+.+... ++. .++.++++-
T Consensus 85 ~~~~~lP~~~vGHSlGcklhlLi~s~------------~~~~r~gniliSF 123 (250)
T PF07082_consen 85 LDPAYLPVYGVGHSLGCKLHLLIGSL------------FDVERAGNILISF 123 (250)
T ss_pred CCcccCCeeeeecccchHHHHHHhhh------------ccCcccceEEEec
Confidence 1 367889999999998888743 333 566677663
No 192
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.40 E-value=0.0017 Score=48.15 Aligned_cols=108 Identities=19% Similarity=0.240 Sum_probs=63.4
Q ss_pred CCCCcEEEEcCCCc-chhhccc--------------chhhHhhhCCceEEEeCCC---CCCCCCCCCCCCCCCHHHHHHH
Q 020741 56 EKRPPLVFVHGSYH-AAWCWAE--------------HWLPFFADSGFDCYAVSLL---GQGESDAPPGTVAGSLQTHAGD 117 (322)
Q Consensus 56 ~~~~~vl~~HG~~~-~~~~~~~--------------~~~~~l~~~g~~v~~~D~~---G~G~S~~~~~~~~~~~~~~~~d 117 (322)
.+...+|++||.|- -+..|.. ++++.-.+.||.|+..+.- -+-.+...+.....+..+.+..
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 35668999999763 2334431 1334444569999988643 1222222222223355555554
Q ss_pred HH-HHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccC
Q 020741 118 VA-DFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSV 173 (322)
Q Consensus 118 l~-~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~ 173 (322)
+- .++. ... ..+.++.||+||...+.+..+++. ...|.++.+.+++
T Consensus 179 vw~~~v~-pa~~~sv~vvahsyGG~~t~~l~~~f~~---------d~~v~aialTDs~ 226 (297)
T KOG3967|consen 179 VWKNIVL-PAKAESVFVVAHSYGGSLTLDLVERFPD---------DESVFAIALTDSA 226 (297)
T ss_pred HHHHHhc-ccCcceEEEEEeccCChhHHHHHHhcCC---------ccceEEEEeeccc
Confidence 43 3333 333 889999999999999999977321 1126677666654
No 193
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.38 E-value=0.00088 Score=48.66 Aligned_cols=56 Identities=16% Similarity=0.179 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHhC---C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCC
Q 020741 112 QTHAGDVADFIQKNL---S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVP 174 (322)
Q Consensus 112 ~~~~~dl~~~l~~~~---~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~ 174 (322)
....+.+...+++.. + .+++++|||+||.+|..++..+... ....+..++.++++.
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~-------~~~~~~~~~~fg~p~ 67 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGR-------GLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhc-------cCCCceEEEEeCCCc
Confidence 344455555555332 5 8899999999999999999875432 012366677777643
No 194
>COG0627 Predicted esterase [General function prediction only]
Probab=97.36 E-value=0.0018 Score=52.54 Aligned_cols=107 Identities=16% Similarity=0.111 Sum_probs=66.2
Q ss_pred CCCCcEEEEcCCCcchhhcc--cchhhHhhhCCceEEEeCCC--------------CCCCCCCCCCC------CCCCHHH
Q 020741 56 EKRPPLVFVHGSYHAAWCWA--EHWLPFFADSGFDCYAVSLL--------------GQGESDAPPGT------VAGSLQT 113 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~--~~~~~~l~~~g~~v~~~D~~--------------G~G~S~~~~~~------~~~~~~~ 113 (322)
.+-|+++++||..++...|. ..+-....+.|+.++++|-. |-+.|-..... ..+.+++
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~t 131 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWET 131 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhH
Confidence 45678888999877754443 23334445567778876322 32222111110 1144444
Q ss_pred H-HHHHHHHHHHhCC--C---CcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCC
Q 020741 114 H-AGDVADFIQKNLS--L---PPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVP 174 (322)
Q Consensus 114 ~-~~dl~~~l~~~~~--~---~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~ 174 (322)
+ .+++-..+++... . .-.++||||||.=|+.+|. .+|+ +..+..+++..
T Consensus 132 fl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~------------~~pd~f~~~sS~Sg~~ 187 (316)
T COG0627 132 FLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLAL------------KHPDRFKSASSFSGIL 187 (316)
T ss_pred HHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhh------------hCcchhceeccccccc
Confidence 3 3466656665665 2 6899999999999999995 4877 77777777654
No 195
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.33 E-value=0.0014 Score=46.74 Aligned_cols=39 Identities=18% Similarity=0.384 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhh
Q 020741 113 THAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNE 152 (322)
Q Consensus 113 ~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~ 152 (322)
...+.+.++++ ..+ .++++.|||+||.+|..++..+...
T Consensus 49 ~~~~~l~~~~~-~~~~~~i~itGHSLGGalA~l~a~~l~~~ 88 (140)
T PF01764_consen 49 QILDALKELVE-KYPDYSIVITGHSLGGALASLAAADLASH 88 (140)
T ss_dssp HHHHHHHHHHH-HSTTSEEEEEEETHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHh-cccCccchhhccchHHHHHHHHHHhhhhc
Confidence 34445555555 334 6799999999999999999887653
No 196
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.16 E-value=0.03 Score=43.80 Aligned_cols=46 Identities=24% Similarity=0.559 Sum_probs=34.5
Q ss_pred HHHHHHHHHhC--C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccC
Q 020741 116 GDVADFIQKNL--S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSV 173 (322)
Q Consensus 116 ~dl~~~l~~~~--~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~ 173 (322)
+.+.-+|++.. . ++-.|+|||+||.+++... ..+|+ +...++++|.
T Consensus 122 ~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aL------------L~~p~~F~~y~~~SPS 171 (264)
T COG2819 122 EQLKPFIEARYRTNSERTAIIGHSLGGLFVLFAL------------LTYPDCFGRYGLISPS 171 (264)
T ss_pred HhhHHHHhcccccCcccceeeeecchhHHHHHHH------------hcCcchhceeeeecch
Confidence 34455555433 3 6689999999999999999 56988 7888887763
No 197
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.11 E-value=0.0015 Score=53.43 Aligned_cols=84 Identities=19% Similarity=0.133 Sum_probs=60.7
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---C-CCcEE
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNL---S-LPPVL 132 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~---~-~~~~l 132 (322)
+...-||.-|=|+-...- +.+.+.|+++|+.|+.+|-.-+=.| ..+.++.++|+..+|+.+- + .++.|
T Consensus 259 sd~~av~~SGDGGWr~lD-k~v~~~l~~~gvpVvGvdsLRYfW~-------~rtPe~~a~Dl~r~i~~y~~~w~~~~~~l 330 (456)
T COG3946 259 SDTVAVFYSGDGGWRDLD-KEVAEALQKQGVPVVGVDSLRYFWS-------ERTPEQIAADLSRLIRFYARRWGAKRVLL 330 (456)
T ss_pred cceEEEEEecCCchhhhh-HHHHHHHHHCCCceeeeehhhhhhc-------cCCHHHHHHHHHHHHHHHHHhhCcceEEE
Confidence 444556666655544433 4688999999999999995433333 2478889999988888432 4 78999
Q ss_pred EEechhHHHHHHHHHH
Q 020741 133 LGHSFGGLIIQYYIAR 148 (322)
Q Consensus 133 vG~S~Gg~~a~~~a~~ 148 (322)
+|+|+|+-+.-....+
T Consensus 331 iGySfGADvlP~~~n~ 346 (456)
T COG3946 331 IGYSFGADVLPFAYNR 346 (456)
T ss_pred EeecccchhhHHHHHh
Confidence 9999999887666644
No 198
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=97.10 E-value=0.023 Score=53.30 Aligned_cols=97 Identities=20% Similarity=0.209 Sum_probs=66.6
Q ss_pred CCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEE
Q 020741 56 EKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESD-APPGTVAGSLQTHAGDVADFIQKNLS-LPPVLL 133 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~-~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lv 133 (322)
+..|++.|+|..-+...... .++..| . .|-+|.-. ...+ ..+++..++....-|++..+ .|..++
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~-~la~rl-----e-----~PaYglQ~T~~vP--~dSies~A~~yirqirkvQP~GPYrl~ 2187 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALE-SLASRL-----E-----IPAYGLQCTEAVP--LDSIESLAAYYIRQIRKVQPEGPYRLA 2187 (2376)
T ss_pred ccCCceEEEeccccchHHHH-HHHhhc-----C-----CcchhhhccccCC--cchHHHHHHHHHHHHHhcCCCCCeeee
Confidence 57899999999866655442 343333 2 23333221 2222 35788888888888885556 999999
Q ss_pred EechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCC
Q 020741 134 GHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVP 174 (322)
Q Consensus 134 G~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~ 174 (322)
|+|+|+.++..+|..+++. .....+|++++.+
T Consensus 2188 GYSyG~~l~f~ma~~Lqe~---------~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2188 GYSYGACLAFEMASQLQEQ---------QSPAPLILLDGSP 2219 (2376)
T ss_pred ccchhHHHHHHHHHHHHhh---------cCCCcEEEecCch
Confidence 9999999999999886542 1256699998764
No 199
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=97.01 E-value=0.0057 Score=51.89 Aligned_cols=97 Identities=20% Similarity=0.264 Sum_probs=65.6
Q ss_pred CCCCCCcEEEEcCCCcchhhcccchhh--------H-----------hhhCCceEEEeC-CCCCCCCCCCCCCCCCCHHH
Q 020741 54 KNEKRPPLVFVHGSYHAAWCWAEHWLP--------F-----------FADSGFDCYAVS-LLGQGESDAPPGTVAGSLQT 113 (322)
Q Consensus 54 ~~~~~~~vl~~HG~~~~~~~~~~~~~~--------~-----------l~~~g~~v~~~D-~~G~G~S~~~~~~~~~~~~~ 113 (322)
...++|.|+++.|.++++..|. .+.+ . +.+. -.++.+| .-|-|.|.........+...
T Consensus 97 dp~~rPvi~wlNGGPGcSS~~g-~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~e~~~d~~~ 174 (498)
T COG2939 97 DPANRPVIFWLNGGPGCSSVTG-LLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGDEKKKDFEG 174 (498)
T ss_pred CCCCCceEEEecCCCChHhhhh-hhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccccccccchhc
Confidence 3457899999999999888775 3311 0 1111 3689999 55889888533322445556
Q ss_pred HHHHHHHHHHHh---C----C--CCcEEEEechhHHHHHHHHHHHhhh
Q 020741 114 HAGDVADFIQKN---L----S--LPPVLLGHSFGGLIIQYYIARIRNE 152 (322)
Q Consensus 114 ~~~dl~~~l~~~---~----~--~~~~lvG~S~Gg~~a~~~a~~~~~~ 152 (322)
..+|+..+++.. + . .+.+|+|.|+||.-+-.+|..+..+
T Consensus 175 ~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~ 222 (498)
T COG2939 175 AGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLED 222 (498)
T ss_pred cchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHh
Confidence 666665555421 1 2 4899999999999999999887653
No 200
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.98 E-value=0.0084 Score=46.31 Aligned_cols=51 Identities=20% Similarity=0.151 Sum_probs=35.2
Q ss_pred HHHHHHHHHhCCCCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCC
Q 020741 116 GDVADFIQKNLSLPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVP 174 (322)
Q Consensus 116 ~dl~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~ 174 (322)
+-+..+++ ..+.++++.|||.||.+|..++...... ....|.+++..+++.
T Consensus 73 ~yl~~~~~-~~~~~i~v~GHSkGGnLA~yaa~~~~~~-------~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 73 AYLKKIAK-KYPGKIYVTGHSKGGNLAQYAAANCDDE-------IQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHH-hCCCCEEEEEechhhHHHHHHHHHccHH-------HhhheeEEEEeeCCC
Confidence 33444444 4556799999999999999999763322 123488888888753
No 201
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.90 E-value=0.025 Score=46.37 Aligned_cols=243 Identities=14% Similarity=0.110 Sum_probs=120.9
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-C-CCcEEEE
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNL-S-LPPVLLG 134 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~-~-~~~~lvG 134 (322)
+..+||.+=||.+..+.|.........+.||.++.+-.|-+-..-.... ...+......-+.+++.... . .++++--
T Consensus 37 s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~-~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~ 115 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASR-RILSLSLASTRLSELLSDYNSDPCPIIFHV 115 (350)
T ss_pred ccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCccccccccccc-ccchhhHHHHHHHHHhhhccCCcCceEEEE
Confidence 4557777778877777677667777888899999998886543322222 12445555566666666333 2 6777889
Q ss_pred echhHHHHHHHH-HHHhhhhhccccCCCC---Ccce-EEEeccCCCCCCCcchhhhhhccchhhhHHHHHHhHhhhcccc
Q 020741 135 HSFGGLIIQYYI-ARIRNEKMLEMETPYP---EIAG-AVLVCSVPPSGNSGLVWRYLFTKPIAAFKVTRSLAAKAFQTDL 209 (322)
Q Consensus 135 ~S~Gg~~a~~~a-~~~~~~~~~~~~~~~p---~v~~-~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (322)
.|+||...+... .+... ..| ++.+ ++....+.........+........... ............
T Consensus 116 FS~ng~~~~~si~~~~~~--------~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~i~- 184 (350)
T KOG2521|consen 116 FSGNGVRLMYSISLQLIK--------HEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDY--VARWARLNYHIT- 184 (350)
T ss_pred ecCCceeehHHHHHHHhh--------cCchhHhhcCCceEeccccccchhhhcceeccccCchhh--HHHHHhcCeEEE-
Confidence 999998766654 22111 013 2333 4444332221111111111111100000 000000000000
Q ss_pred ccccccccCCccchHHHHHHHHHHhhcCCCcccchhhhhcCCCCCCCCCccccEEEEeeCCCCccChhhHHHHhhhcC--
Q 020741 210 SLCKETFFSSSMEDHLVLRYQELMKESSRMPLFDLRKLNASLPVPSVPKSSIKVLVLGAKDDFIVDAQGLSETGSFYG-- 287 (322)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~-- 287 (322)
...+.........+.............. +....... -.....+.+.+++..|.++|.+..+++.+..+
T Consensus 185 ---~~~~~~~~~~~~~~~~~~~~~~~~r~~~---~~~r~~~~----~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~ 254 (350)
T KOG2521|consen 185 ---LLTMAGNEGGAYLLGPLAEKISMSRKYH---FLDRYEEQ----RNELPWNQLYLYSDNDDVLPADEIEKFIALRREK 254 (350)
T ss_pred ---EEEeeecccchhhhhhhhhccccccchH---HHHHHHhh----hhcccccceeecCCccccccHHHHHHHHHHHHhc
Confidence 0000000000000000000000000000 00000000 01235678899999999999988887755442
Q ss_pred ---ceeEEecCCcccceeccchhhhHHHHHHHHhhhc
Q 020741 288 ---VLPVCVEGVAHDMMLDCSWEKGASVILSWLDGLR 321 (322)
Q Consensus 288 ---~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~~ 321 (322)
++.+-+.++-|..+...-+..+.+...+|++...
T Consensus 255 g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~ 291 (350)
T KOG2521|consen 255 GVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVI 291 (350)
T ss_pred CceEEEeeccCccceeeeccCcHHHHHHHHHHHHhcc
Confidence 6666677889998776544899999999998653
No 202
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.87 E-value=0.0092 Score=50.46 Aligned_cols=105 Identities=21% Similarity=0.324 Sum_probs=73.7
Q ss_pred CCCCcEEEEcCCCcchhhcc----cchhhHhhhCCceEEEeCCCCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHHh-
Q 020741 56 EKRPPLVFVHGSYHAAWCWA----EHWLPFFADSGFDCYAVSLLGQGESDAPPGT-----VAGSLQTHAGDVADFIQKN- 125 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~----~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~-----~~~~~~~~~~dl~~~l~~~- 125 (322)
.++|..|+|-|=+.....|. ..+...-++.|-.|+..+.|-+|.|.+.... ...+..+...|++++|++.
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n 163 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMN 163 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHH
Confidence 36777788877555444452 1233344455889999999999998665541 2246778889999998832
Q ss_pred --C--C--CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEecc
Q 020741 126 --L--S--LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCS 172 (322)
Q Consensus 126 --~--~--~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~ 172 (322)
. . .|.+.+|.|+-|.++..+=+ ++|+ +.+.|.-++
T Consensus 164 ~k~n~~~~~~WitFGgSYsGsLsAW~R~------------~yPel~~GsvASSa 205 (514)
T KOG2182|consen 164 AKFNFSDDSKWITFGGSYSGSLSAWFRE------------KYPELTVGSVASSA 205 (514)
T ss_pred hhcCCCCCCCeEEECCCchhHHHHHHHH------------hCchhheeeccccc
Confidence 1 2 38999999999999988774 5999 666665544
No 203
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.86 E-value=0.0021 Score=55.74 Aligned_cols=68 Identities=18% Similarity=0.154 Sum_probs=44.7
Q ss_pred hcccchhhHhhhCCce-----EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CC-CCcEEEEechhHHHHH
Q 020741 73 CWAEHWLPFFADSGFD-----CYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKN---LS-LPPVLLGHSFGGLIIQ 143 (322)
Q Consensus 73 ~~~~~~~~~l~~~g~~-----v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~---~~-~~~~lvG~S~Gg~~a~ 143 (322)
.|. .+++.|++.||. ...+|+|= |. . ....-+++...+...|+.. -+ ++++|+||||||.+++
T Consensus 157 vw~-kLIe~L~~iGY~~~nL~gAPYDWRl---s~--~--~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~l 228 (642)
T PLN02517 157 VWA-VLIANLARIGYEEKNMYMAAYDWRL---SF--Q--NTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFL 228 (642)
T ss_pred eHH-HHHHHHHHcCCCCCceeeccccccc---Cc--c--chhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHH
Confidence 454 789999998886 33445551 10 0 0122355556666666633 23 8999999999999999
Q ss_pred HHHHH
Q 020741 144 YYIAR 148 (322)
Q Consensus 144 ~~a~~ 148 (322)
.+...
T Consensus 229 yFL~w 233 (642)
T PLN02517 229 HFMKW 233 (642)
T ss_pred HHHHh
Confidence 98864
No 204
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.80 E-value=0.059 Score=39.83 Aligned_cols=53 Identities=23% Similarity=0.308 Sum_probs=38.1
Q ss_pred CHHHHHHHHHHHHHHhC-----C-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCC
Q 020741 110 SLQTHAGDVADFIQKNL-----S-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVP 174 (322)
Q Consensus 110 ~~~~~~~dl~~~l~~~~-----~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~ 174 (322)
..+.-+.+|..+++ -+ + .++.++|||+|+.++-..+.. ....+..+++++++.
T Consensus 86 ~A~~ga~~L~~f~~-gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~-----------~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 86 YARAGAPRLARFLD-GLRATHGPDAHLTVVGHSYGSTVVGLAAQQ-----------GGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHHH-HhhhhcCCCCCEEEEEecchhHHHHHHhhh-----------CCCCcccEEEECCCC
Confidence 35566677777776 33 2 578999999999999888843 122388898888753
No 205
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.64 E-value=0.066 Score=42.61 Aligned_cols=100 Identities=23% Similarity=0.248 Sum_probs=58.9
Q ss_pred CCCCcEEEEcCC--CcchhhcccchhhHhhhCC----ceEEEeCCCCC---CCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 020741 56 EKRPPLVFVHGS--YHAAWCWAEHWLPFFADSG----FDCYAVSLLGQ---GESDAPPGTVAGSLQTHAGDVADFIQKNL 126 (322)
Q Consensus 56 ~~~~~vl~~HG~--~~~~~~~~~~~~~~l~~~g----~~v~~~D~~G~---G~S~~~~~~~~~~~~~~~~dl~~~l~~~~ 126 (322)
.+-|++++.||- ..+...+. +.+.|...| -.++.+|.--- ...-. ........+++++.=+|++.+
T Consensus 96 ~k~pvl~~~DG~~~~~~g~i~~--~~dsli~~g~i~pai~vgid~~d~~~R~~~~~---~n~~~~~~L~~eLlP~v~~~y 170 (299)
T COG2382 96 EKYPVLYLQDGQDWFRSGRIPR--ILDSLIAAGEIPPAILVGIDYIDVKKRREELH---CNEAYWRFLAQELLPYVEERY 170 (299)
T ss_pred ccccEEEEeccHHHHhcCChHH--HHHHHHHcCCCCCceEEecCCCCHHHHHHHhc---ccHHHHHHHHHHhhhhhhccC
Confidence 467899999984 23333332 334444332 35666665320 00000 011234556666666677555
Q ss_pred C-----CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEecc
Q 020741 127 S-----LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCS 172 (322)
Q Consensus 127 ~-----~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~ 172 (322)
+ ..-+|.|-|+||.+++..+ ..+|+.-+.|+.-+
T Consensus 171 p~~~~a~~r~L~G~SlGG~vsL~ag------------l~~Pe~FG~V~s~S 209 (299)
T COG2382 171 PTSADADGRVLAGDSLGGLVSLYAG------------LRHPERFGHVLSQS 209 (299)
T ss_pred cccccCCCcEEeccccccHHHHHHH------------hcCchhhceeeccC
Confidence 3 4457999999999999999 56999656655544
No 206
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=96.59 E-value=0.0038 Score=45.99 Aligned_cols=61 Identities=15% Similarity=0.077 Sum_probs=48.9
Q ss_pred cccEEEEeeCCCCccChhhHHHHhhhc---C---ceeEEecCCcccceeccc--hhhhHHHHHHHHhhh
Q 020741 260 SIKVLVLGAKDDFIVDAQGLSETGSFY---G---VLPVCVEGVAHDMMLDCS--WEKGASVILSWLDGL 320 (322)
Q Consensus 260 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~---~---~~~~~~~~~gH~~~~~~~--~~~~~~~i~~fl~~~ 320 (322)
+++.|-|-|+.|.++.........+.+ + ...++.+|+||+..+..+ ++++...|.+||.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 467788999999999987666555544 2 677788999999888766 689999999999763
No 207
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.48 E-value=0.013 Score=45.84 Aligned_cols=24 Identities=25% Similarity=0.468 Sum_probs=21.1
Q ss_pred CCcEEEEechhHHHHHHHHHHHhh
Q 020741 128 LPPVLLGHSFGGLIIQYYIARIRN 151 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~a~~~a~~~~~ 151 (322)
.++++.|||+||.+|..++..+..
T Consensus 128 ~~i~vtGHSLGGaiA~l~a~~l~~ 151 (229)
T cd00519 128 YKIIVTGHSLGGALASLLALDLRL 151 (229)
T ss_pred ceEEEEccCHHHHHHHHHHHHHHh
Confidence 789999999999999999977543
No 208
>PLN02454 triacylglycerol lipase
Probab=96.28 E-value=0.018 Score=48.17 Aligned_cols=37 Identities=19% Similarity=0.323 Sum_probs=25.7
Q ss_pred HHHHHHHHHhCCC--CcEEEEechhHHHHHHHHHHHhhh
Q 020741 116 GDVADFIQKNLSL--PPVLLGHSFGGLIIQYYIARIRNE 152 (322)
Q Consensus 116 ~dl~~~l~~~~~~--~~~lvG~S~Gg~~a~~~a~~~~~~ 152 (322)
..+..++++.-+. +|++.|||+||.+|+.+|..+...
T Consensus 214 ~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~ 252 (414)
T PLN02454 214 AKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVEN 252 (414)
T ss_pred HHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHh
Confidence 3344444422233 389999999999999999776543
No 209
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.17 E-value=0.015 Score=43.81 Aligned_cols=68 Identities=12% Similarity=0.114 Sum_probs=40.0
Q ss_pred hHhhhCCceEEEeCCCCCCCCCCC-----CC--CCCCCHHHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHH
Q 020741 80 PFFADSGFDCYAVSLLGQGESDAP-----PG--TVAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIAR 148 (322)
Q Consensus 80 ~~l~~~g~~v~~~D~~G~G~S~~~-----~~--~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~ 148 (322)
..|.+. .+|+++=+|=....... .. .......+..+....+|++.-+ ++++|+|||.|+.+..++..+
T Consensus 40 s~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 40 SAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred hhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHH
Confidence 344444 57888776632211111 00 1112344444455566663323 799999999999999999976
No 210
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=96.17 E-value=0.084 Score=40.89 Aligned_cols=66 Identities=18% Similarity=0.258 Sum_probs=45.6
Q ss_pred CceEEEeCCCC-CCC-CCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCcEEEEechhHHHHHHHHHHHhh
Q 020741 86 GFDCYAVSLLG-QGE-SDAPPGTVAGSLQTHAGDVADFIQKNL--SLPPVLLGHSFGGLIIQYYIARIRN 151 (322)
Q Consensus 86 g~~v~~~D~~G-~G~-S~~~~~~~~~~~~~~~~dl~~~l~~~~--~~~~~lvG~S~Gg~~a~~~a~~~~~ 151 (322)
|+.+..+++|. ++- +.........+..+-++.+.+.|+... +++++++|+|+|+.++...++++.+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~ 71 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAA 71 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHh
Confidence 56777777775 111 111111224567777788888888544 3899999999999999999988765
No 211
>PLN02408 phospholipase A1
Probab=96.16 E-value=0.023 Score=46.95 Aligned_cols=38 Identities=21% Similarity=0.327 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHhCC--CCcEEEEechhHHHHHHHHHHHhh
Q 020741 114 HAGDVADFIQKNLS--LPPVLLGHSFGGLIIQYYIARIRN 151 (322)
Q Consensus 114 ~~~dl~~~l~~~~~--~~~~lvG~S~Gg~~a~~~a~~~~~ 151 (322)
..+++..+++++-+ .+|++.|||+||.+|..+|..+..
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~ 223 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKT 223 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHH
Confidence 34556666663323 358999999999999999987654
No 212
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=96.10 E-value=0.012 Score=39.75 Aligned_cols=39 Identities=23% Similarity=0.387 Sum_probs=24.2
Q ss_pred EEEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcc
Q 020741 28 VSHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWA 75 (322)
Q Consensus 28 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~ 75 (322)
-...+ +|..||+...... .++..+|||+||+++|-..|.
T Consensus 71 f~t~I-~g~~iHFih~rs~--------~~~aiPLll~HGWPgSf~Ef~ 109 (112)
T PF06441_consen 71 FKTEI-DGLDIHFIHVRSK--------RPNAIPLLLLHGWPGSFLEFL 109 (112)
T ss_dssp EEEEE-TTEEEEEEEE--S---------TT-EEEEEE--SS--GGGGH
T ss_pred eeEEE-eeEEEEEEEeeCC--------CCCCeEEEEECCCCccHHhHH
Confidence 34444 7999999888754 347789999999999987765
No 213
>PLN02571 triacylglycerol lipase
Probab=96.00 E-value=0.011 Score=49.42 Aligned_cols=41 Identities=17% Similarity=0.312 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHhCC--CCcEEEEechhHHHHHHHHHHHhhh
Q 020741 112 QTHAGDVADFIQKNLS--LPPVLLGHSFGGLIIQYYIARIRNE 152 (322)
Q Consensus 112 ~~~~~dl~~~l~~~~~--~~~~lvG~S~Gg~~a~~~a~~~~~~ 152 (322)
+++.+++..+++..-+ .++++.|||+||.+|+..|..+...
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl~~~ 250 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDIVAN 250 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHHHHh
Confidence 4556677777773333 2689999999999999999876543
No 214
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.84 E-value=0.0099 Score=49.98 Aligned_cols=71 Identities=18% Similarity=0.346 Sum_probs=47.0
Q ss_pred hhcccchhhHhhhCCce------EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCC-CCcEEEEechhHHH
Q 020741 72 WCWAEHWLPFFADSGFD------CYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQK---NLS-LPPVLLGHSFGGLI 141 (322)
Q Consensus 72 ~~~~~~~~~~l~~~g~~------v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~---~~~-~~~~lvG~S~Gg~~ 141 (322)
..|. .+++.|..-||. -..+|+|= |... ....+++...+...|+. .-+ +|++|++||||+.+
T Consensus 124 ~~w~-~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~~----~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~ 195 (473)
T KOG2369|consen 124 WYWH-ELIENLVGIGYERGKTLFGAPYDWRL---SYHN----SEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLY 195 (473)
T ss_pred HHHH-HHHHHHHhhCcccCceeeccccchhh---ccCC----hhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHH
Confidence 3554 678888877776 44678872 1111 12344555555555553 335 99999999999999
Q ss_pred HHHHHHHHh
Q 020741 142 IQYYIARIR 150 (322)
Q Consensus 142 a~~~a~~~~ 150 (322)
.+.+.....
T Consensus 196 ~lyFl~w~~ 204 (473)
T KOG2369|consen 196 VLYFLKWVE 204 (473)
T ss_pred HHHHHhccc
Confidence 999996633
No 215
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=95.79 E-value=0.035 Score=49.67 Aligned_cols=89 Identities=17% Similarity=0.082 Sum_probs=50.6
Q ss_pred CCcEEEEcCCC---cchhhccc-chhhHhhhCCceEEEeCCC----CCCCCCCCCCCCCCCHHHHHH---HHHHHHHHhC
Q 020741 58 RPPLVFVHGSY---HAAWCWAE-HWLPFFADSGFDCYAVSLL----GQGESDAPPGTVAGSLQTHAG---DVADFIQKNL 126 (322)
Q Consensus 58 ~~~vl~~HG~~---~~~~~~~~-~~~~~l~~~g~~v~~~D~~----G~G~S~~~~~~~~~~~~~~~~---dl~~~l~~~~ 126 (322)
-|++|++||.+ ++...+.. .....+..+..-|+++.+| |+...........+.+.++.. .+.+.|...-
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 79999999974 22221210 1223333345667777776 332222111112345554444 4455555223
Q ss_pred C--CCcEEEEechhHHHHHHHH
Q 020741 127 S--LPPVLLGHSFGGLIIQYYI 146 (322)
Q Consensus 127 ~--~~~~lvG~S~Gg~~a~~~a 146 (322)
| .+|.|+|||.||..+..+.
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHh
Confidence 3 7799999999999998877
No 216
>PLN00413 triacylglycerol lipase
Probab=95.70 E-value=0.02 Score=48.66 Aligned_cols=37 Identities=22% Similarity=0.335 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHH
Q 020741 112 QTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARI 149 (322)
Q Consensus 112 ~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~ 149 (322)
.+..+.+.++++ ..+ .++++.|||+||.+|..+|..+
T Consensus 268 y~i~~~Lk~ll~-~~p~~kliVTGHSLGGALAtLaA~~L 305 (479)
T PLN00413 268 YTILRHLKEIFD-QNPTSKFILSGHSLGGALAILFTAVL 305 (479)
T ss_pred HHHHHHHHHHHH-HCCCCeEEEEecCHHHHHHHHHHHHH
Confidence 345667777777 444 7899999999999999998653
No 217
>PLN02162 triacylglycerol lipase
Probab=95.62 E-value=0.021 Score=48.35 Aligned_cols=39 Identities=28% Similarity=0.399 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHhCCCCcEEEEechhHHHHHHHHHHH
Q 020741 111 LQTHAGDVADFIQKNLSLPPVLLGHSFGGLIIQYYIARI 149 (322)
Q Consensus 111 ~~~~~~dl~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~ 149 (322)
+.+..+.+.+.+.+.-+.++++.|||+||.+|..+|..+
T Consensus 261 y~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L 299 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAIL 299 (475)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHH
Confidence 334455566666632237899999999999999987654
No 218
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.59 E-value=0.016 Score=47.92 Aligned_cols=87 Identities=18% Similarity=0.207 Sum_probs=48.8
Q ss_pred CCCCcEEEEcCCCc-chhhcccchhhHhhhC--CceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCcE
Q 020741 56 EKRPPLVFVHGSYH-AAWCWAEHWLPFFADS--GFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LPPV 131 (322)
Q Consensus 56 ~~~~~vl~~HG~~~-~~~~~~~~~~~~l~~~--g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~ 131 (322)
+++-.||++||+-+ +...|. ..+...... +..++..... |.......+...--...++++.+.+. ... .++-
T Consensus 78 k~~HLvVlthGi~~~~~~~~~-~~~~~~~kk~p~~~iv~~g~~--~~~~~T~~Gv~~lG~Rla~~~~e~~~-~~si~kIS 153 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYWK-EKIEQMTKKMPDKLIVVRGKM--NNMCQTFDGVDVLGERLAEEVKETLY-DYSIEKIS 153 (405)
T ss_pred CCceEEEeccccccccHHHHH-HHHHhhhcCCCcceEeeeccc--cchhhccccceeeecccHHHHhhhhh-ccccceee
Confidence 35568999999866 566665 334444443 2322222222 22222222112223345555555555 444 7899
Q ss_pred EEEechhHHHHHHHH
Q 020741 132 LLGHSFGGLIIQYYI 146 (322)
Q Consensus 132 lvG~S~Gg~~a~~~a 146 (322)
.+|||+||.++..+.
T Consensus 154 fvghSLGGLvar~AI 168 (405)
T KOG4372|consen 154 FVGHSLGGLVARYAI 168 (405)
T ss_pred eeeeecCCeeeeEEE
Confidence 999999999876554
No 219
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=95.53 E-value=0.19 Score=40.34 Aligned_cols=115 Identities=15% Similarity=0.223 Sum_probs=76.6
Q ss_pred EEeCCCCceEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchh-hcccchh--------------hHhhhCCceEEEeC
Q 020741 29 SHQLPSGLNIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAW-CWAEHWL--------------PFFADSGFDCYAVS 93 (322)
Q Consensus 29 ~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~-~~~~~~~--------------~~l~~~g~~v~~~D 93 (322)
+++..++....++.+-.. ++.....|..+.+.|.++.+. -|- .+. ..|.. ..++.+|
T Consensus 7 ~v~vr~~a~~F~wly~~~-----~~~ks~~pl~lwlqGgpGaSstG~G-NFeE~GPl~~~~~~r~~TWlk~--adllfvD 78 (414)
T KOG1283|consen 7 YVDVRTGAHMFWWLYYAT-----ANVKSERPLALWLQGGPGASSTGFG-NFEELGPLDLDGSPRDWTWLKD--ADLLFVD 78 (414)
T ss_pred ceeeecCceEEEEEeeec-----cccccCCCeeEEecCCCCCCCcCcc-chhhcCCcccCCCcCCchhhhh--ccEEEec
Confidence 455566777777777644 122256788899999855433 222 221 12221 4788888
Q ss_pred CC-CCCCCCCCCC-CCCCCHHHHHHHHHHHHHHhC------C-CCcEEEEechhHHHHHHHHHHHhh
Q 020741 94 LL-GQGESDAPPG-TVAGSLQTHAGDVADFIQKNL------S-LPPVLLGHSFGGLIIQYYIARIRN 151 (322)
Q Consensus 94 ~~-G~G~S~~~~~-~~~~~~~~~~~dl~~~l~~~~------~-~~~~lvG~S~Gg~~a~~~a~~~~~ 151 (322)
-| |.|.|-.... ....+..+.+.|+.++++..+ . .|++|+..|+||-+|..++..+-.
T Consensus 79 nPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~ 145 (414)
T KOG1283|consen 79 NPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDD 145 (414)
T ss_pred CCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHH
Confidence 76 7887765544 223467788999999998543 3 689999999999999999876443
No 220
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.50 E-value=0.052 Score=44.67 Aligned_cols=43 Identities=26% Similarity=0.469 Sum_probs=33.0
Q ss_pred CC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCC
Q 020741 126 LS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVP 174 (322)
Q Consensus 126 ~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~ 174 (322)
.+ .||.|||||+|+-+...+...+.+++ .+.-|..+++++++.
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~------~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERK------AFGLVENVVLMGAPV 260 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhcc------ccCeEeeEEEecCCC
Confidence 46 78999999999999999998776531 223378999988654
No 221
>PLN02324 triacylglycerol lipase
Probab=95.49 E-value=0.023 Score=47.61 Aligned_cols=38 Identities=16% Similarity=0.308 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHhCC--CCcEEEEechhHHHHHHHHHHHhh
Q 020741 114 HAGDVADFIQKNLS--LPPVLLGHSFGGLIIQYYIARIRN 151 (322)
Q Consensus 114 ~~~dl~~~l~~~~~--~~~~lvG~S~Gg~~a~~~a~~~~~ 151 (322)
..+++..+++.+-+ ..|++.|||+||.+|+..|..+..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl~~ 238 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAADLVY 238 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHHHHH
Confidence 44456666663333 358999999999999999977543
No 222
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.40 E-value=0.02 Score=41.21 Aligned_cols=42 Identities=17% Similarity=0.302 Sum_probs=34.5
Q ss_pred HHHHHhCCCCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccC
Q 020741 120 DFIQKNLSLPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSV 173 (322)
Q Consensus 120 ~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~ 173 (322)
-++++.++....+-|.||||..|..+. .++|+ ..++|.+++.
T Consensus 93 Yv~eEalpgs~~~sgcsmGayhA~nfv------------frhP~lftkvialSGv 135 (227)
T COG4947 93 YVIEEALPGSTIVSGCSMGAYHAANFV------------FRHPHLFTKVIALSGV 135 (227)
T ss_pred HHHHhhcCCCccccccchhhhhhhhhh------------eeChhHhhhheeecce
Confidence 345556677788899999999999999 66999 8899988874
No 223
>PLN02934 triacylglycerol lipase
Probab=95.36 E-value=0.027 Score=48.29 Aligned_cols=38 Identities=16% Similarity=0.296 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHh
Q 020741 112 QTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIR 150 (322)
Q Consensus 112 ~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~ 150 (322)
....+.+.++++ ..+ .++++.|||+||.+|..++..+.
T Consensus 305 ~~v~~~lk~ll~-~~p~~kIvVTGHSLGGALAtLaA~~L~ 343 (515)
T PLN02934 305 YAVRSKLKSLLK-EHKNAKFVVTGHSLGGALAILFPTVLV 343 (515)
T ss_pred HHHHHHHHHHHH-HCCCCeEEEeccccHHHHHHHHHHHHH
Confidence 345566777777 444 78999999999999999986543
No 224
>PLN02310 triacylglycerol lipase
Probab=95.36 E-value=0.068 Score=44.83 Aligned_cols=39 Identities=15% Similarity=0.232 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHhC--C--CCcEEEEechhHHHHHHHHHHHh
Q 020741 112 QTHAGDVADFIQKNL--S--LPPVLLGHSFGGLIIQYYIARIR 150 (322)
Q Consensus 112 ~~~~~dl~~~l~~~~--~--~~~~lvG~S~Gg~~a~~~a~~~~ 150 (322)
++..+.+..+++.+. + .+|++.|||+||.+|+..|..+.
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~ 231 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAA 231 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHH
Confidence 344556666666332 2 46899999999999999997643
No 225
>PLN02802 triacylglycerol lipase
Probab=95.32 E-value=0.027 Score=48.28 Aligned_cols=39 Identities=21% Similarity=0.377 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHhCC--CCcEEEEechhHHHHHHHHHHHhh
Q 020741 113 THAGDVADFIQKNLS--LPPVLLGHSFGGLIIQYYIARIRN 151 (322)
Q Consensus 113 ~~~~dl~~~l~~~~~--~~~~lvG~S~Gg~~a~~~a~~~~~ 151 (322)
+..+++..+++.+-+ .+|++.|||+||.+|..+|..+..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL~~ 353 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADELAT 353 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHHHH
Confidence 344556666664333 368999999999999999987654
No 226
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.06 E-value=0.85 Score=32.70 Aligned_cols=77 Identities=10% Similarity=0.116 Sum_probs=48.7
Q ss_pred CcEEEEcCCCcchhhcccchhhHhhhCCce-EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEech
Q 020741 59 PPLVFVHGSYHAAWCWAEHWLPFFADSGFD-CYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLPPVLLGHSF 137 (322)
Q Consensus 59 ~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~-v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~lvG~S~ 137 (322)
-.||+.-|++..+.... +++ +.+ ++. ++++|+..... ..++. ++ ..+.||++||
T Consensus 12 ~LIvyFaGwgtpps~v~-HLi--lpe-N~dl~lcYDY~dl~l--------dfDfs-------Ay------~hirlvAwSM 66 (214)
T COG2830 12 HLIVYFAGWGTPPSAVN-HLI--LPE-NHDLLLCYDYQDLNL--------DFDFS-------AY------RHIRLVAWSM 66 (214)
T ss_pred EEEEEEecCCCCHHHHh-hcc--CCC-CCcEEEEeehhhcCc--------ccchh-------hh------hhhhhhhhhH
Confidence 37888889988777664 432 223 354 56889873311 11111 10 5678999999
Q ss_pred hHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccC
Q 020741 138 GGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSV 173 (322)
Q Consensus 138 Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~ 173 (322)
|-.+|-++... . .+++.+.+++.
T Consensus 67 GVwvAeR~lqg------------~-~lksatAiNGT 89 (214)
T COG2830 67 GVWVAERVLQG------------I-RLKSATAINGT 89 (214)
T ss_pred HHHHHHHHHhh------------c-cccceeeecCC
Confidence 99999988843 2 26677777764
No 227
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.99 E-value=0.11 Score=44.92 Aligned_cols=38 Identities=16% Similarity=0.219 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHhC--C--CCcEEEEechhHHHHHHHHHHHh
Q 020741 113 THAGDVADFIQKNL--S--LPPVLLGHSFGGLIIQYYIARIR 150 (322)
Q Consensus 113 ~~~~dl~~~l~~~~--~--~~~~lvG~S~Gg~~a~~~a~~~~ 150 (322)
+..+++..+++.+- + .++.+.|||+||.+|+..|..+.
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa 340 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAA 340 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHH
Confidence 44566677776332 2 35899999999999999997654
No 228
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=94.97 E-value=0.12 Score=45.01 Aligned_cols=102 Identities=21% Similarity=0.154 Sum_probs=58.1
Q ss_pred CCCCcEEEEcCCCc---ch---hhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--hC-
Q 020741 56 EKRPPLVFVHGSYH---AA---WCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQK--NL- 126 (322)
Q Consensus 56 ~~~~~vl~~HG~~~---~~---~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~--~~- 126 (322)
.++-.|+-+||.|. ++ +.|...|+.. .|..|+.+|+- -.+..+.....++..-....+|+. .+
T Consensus 394 ~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~a---L~cPiiSVdYS-----LAPEaPFPRaleEv~fAYcW~inn~allG 465 (880)
T KOG4388|consen 394 RSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQA---LGCPIISVDYS-----LAPEAPFPRALEEVFFAYCWAINNCALLG 465 (880)
T ss_pred CCceEEEEecCCceeeeccccccHHHHHHHHH---hCCCeEEeeec-----cCCCCCCCcHHHHHHHHHHHHhcCHHHhC
Confidence 35667888999863 22 2222233333 37999999984 333333334444444333333331 23
Q ss_pred --CCCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEecc
Q 020741 127 --SLPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCS 172 (322)
Q Consensus 127 --~~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~ 172 (322)
+++|+++|-|.||.+.+-.+.+.-..+ .+- ..++++.-+
T Consensus 466 ~TgEriv~aGDSAGgNL~~~VaLr~i~~g-----vRv--PDGl~laY~ 506 (880)
T KOG4388|consen 466 STGERIVLAGDSAGGNLCFTVALRAIAYG-----VRV--PDGLMLAYP 506 (880)
T ss_pred cccceEEEeccCCCcceeehhHHHHHHhC-----CCC--CCceEEecC
Confidence 389999999999998766665433322 112 456666554
No 229
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=94.93 E-value=0.054 Score=45.04 Aligned_cols=103 Identities=19% Similarity=0.198 Sum_probs=75.4
Q ss_pred CCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHH---hCCCCcE
Q 020741 56 EKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGT-VAGSLQTHAGDVADFIQK---NLSLPPV 131 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~-~~~~~~~~~~dl~~~l~~---~~~~~~~ 131 (322)
.++|+|+..-|++.+...........| +-+-+.+++|-+|.|.+.+.. ...++.+.+.|...+++. ..+++.+
T Consensus 61 ~drPtV~~T~GY~~~~~p~r~Ept~Ll---d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWI 137 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSPRRSEPTQLL---DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWI 137 (448)
T ss_pred CCCCeEEEecCcccccCccccchhHhh---ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCce
Confidence 478999999998765544432223333 358899999999999877652 235788899998777762 2348889
Q ss_pred EEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccC
Q 020741 132 LLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSV 173 (322)
Q Consensus 132 lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~ 173 (322)
--|-|-||+.++.+= .-+|+ |.+.|.--++
T Consensus 138 STG~SKGGmTa~y~r------------rFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 138 STGGSKGGMTAVYYR------------RFYPDDVDGTVAYVAP 168 (448)
T ss_pred ecCcCCCceeEEEEe------------eeCCCCCCeeeeeecc
Confidence 999999999998876 45898 9888776554
No 230
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=94.84 E-value=0.6 Score=40.82 Aligned_cols=60 Identities=13% Similarity=0.098 Sum_probs=45.8
Q ss_pred cccEEEEeeCCCCccChhhHHHHhhhc-----------C--ceeEEecCCcccceeccc-hhhhHHHHHHHHhh
Q 020741 260 SIKVLVLGAKDDFIVDAQGLSETGSFY-----------G--VLPVCVEGVAHDMMLDCS-WEKGASVILSWLDG 319 (322)
Q Consensus 260 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~-----------~--~~~~~~~~~gH~~~~~~~-~~~~~~~i~~fl~~ 319 (322)
.-.+++.||..|.++++..+...++.+ . .++..+||.+|+.--..+ .-.....|.+|+++
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 358999999999999987766555432 1 678889999998765422 25788899999975
No 231
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=94.80 E-value=0.17 Score=37.77 Aligned_cols=76 Identities=16% Similarity=0.189 Sum_probs=40.9
Q ss_pred ceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCC-CCcEEEEechhHHHHHHHHHH--HhhhhhccccCC
Q 020741 87 FDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQK---NLS-LPPVLLGHSFGGLIIQYYIAR--IRNEKMLEMETP 160 (322)
Q Consensus 87 ~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~---~~~-~~~~lvG~S~Gg~~a~~~a~~--~~~~~~~~~~~~ 160 (322)
..+..+++|-..... . ...+...-++++...|++ ..+ .+++|+|+|.|+.++..++.. +... .
T Consensus 40 ~~~~~V~YpA~~~~~---~-y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~-------~ 108 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN---S-YGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPD-------V 108 (179)
T ss_dssp EEEEE--S---SCGG---S-CHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHH-------H
T ss_pred eEEEecCCCCCCCcc---c-ccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChh-------h
Confidence 455566776322111 0 112344444555555542 345 789999999999999999866 1110 0
Q ss_pred CCCcceEEEeccC
Q 020741 161 YPEIAGAVLVCSV 173 (322)
Q Consensus 161 ~p~v~~~vl~~~~ 173 (322)
..+|.++++++.+
T Consensus 109 ~~~I~avvlfGdP 121 (179)
T PF01083_consen 109 ADRIAAVVLFGDP 121 (179)
T ss_dssp HHHEEEEEEES-T
T ss_pred hhhEEEEEEecCC
Confidence 1128888888753
No 232
>PLN02761 lipase class 3 family protein
Probab=94.60 E-value=0.057 Score=46.50 Aligned_cols=39 Identities=15% Similarity=0.215 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHh----CC--CCcEEEEechhHHHHHHHHHHHhh
Q 020741 113 THAGDVADFIQKN----LS--LPPVLLGHSFGGLIIQYYIARIRN 151 (322)
Q Consensus 113 ~~~~dl~~~l~~~----~~--~~~~lvG~S~Gg~~a~~~a~~~~~ 151 (322)
++.+.+..+++.+ -+ -+|++.|||+||.+|...|..+..
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~ 317 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAE 317 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHH
Confidence 3445566666633 12 369999999999999999977543
No 233
>PLN02719 triacylglycerol lipase
Probab=94.60 E-value=0.055 Score=46.52 Aligned_cols=38 Identities=18% Similarity=0.309 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHhC---C--CCcEEEEechhHHHHHHHHHHHhh
Q 020741 114 HAGDVADFIQKNL---S--LPPVLLGHSFGGLIIQYYIARIRN 151 (322)
Q Consensus 114 ~~~dl~~~l~~~~---~--~~~~lvG~S~Gg~~a~~~a~~~~~ 151 (322)
..+.+..+++++- + .+|.+.|||+||.+|..+|..+..
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~ 321 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAE 321 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHH
Confidence 4445555555321 1 368999999999999999987654
No 234
>PLN02753 triacylglycerol lipase
Probab=94.36 E-value=0.068 Score=46.10 Aligned_cols=39 Identities=21% Similarity=0.313 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhC-----CCCcEEEEechhHHHHHHHHHHHhh
Q 020741 113 THAGDVADFIQKNL-----SLPPVLLGHSFGGLIIQYYIARIRN 151 (322)
Q Consensus 113 ~~~~dl~~~l~~~~-----~~~~~lvG~S~Gg~~a~~~a~~~~~ 151 (322)
+..+.+..+++++- +.+|++.|||+||.+|+.+|..+..
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~ 335 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAE 335 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHH
Confidence 34445556665331 1478999999999999999977654
No 235
>PLN02847 triacylglycerol lipase
Probab=94.32 E-value=0.15 Score=44.83 Aligned_cols=23 Identities=26% Similarity=0.407 Sum_probs=20.2
Q ss_pred CCcEEEEechhHHHHHHHHHHHh
Q 020741 128 LPPVLLGHSFGGLIIQYYIARIR 150 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~a~~~a~~~~ 150 (322)
-+++++|||+||.+|..++..+.
T Consensus 251 YkLVITGHSLGGGVAALLAilLR 273 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYILR 273 (633)
T ss_pred CeEEEeccChHHHHHHHHHHHHh
Confidence 57999999999999999987653
No 236
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=94.07 E-value=0.21 Score=41.52 Aligned_cols=40 Identities=15% Similarity=0.258 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhh
Q 020741 112 QTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNE 152 (322)
Q Consensus 112 ~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~ 152 (322)
..+.+++..+++ ..+ -++.+-|||+||.+|..+|..+...
T Consensus 155 ~~~~~~~~~L~~-~~~~~~i~vTGHSLGgAlA~laa~~i~~~ 195 (336)
T KOG4569|consen 155 SGLDAELRRLIE-LYPNYSIWVTGHSLGGALASLAALDLVKN 195 (336)
T ss_pred HHHHHHHHHHHH-hcCCcEEEEecCChHHHHHHHHHHHHHHc
Confidence 466677777777 555 7899999999999999999876543
No 237
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.40 E-value=0.24 Score=43.23 Aligned_cols=64 Identities=20% Similarity=0.361 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHHHHHh-CC--CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccC
Q 020741 110 SLQTHAGDVADFIQKN-LS--LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSV 173 (322)
Q Consensus 110 ~~~~~~~dl~~~l~~~-~~--~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~ 173 (322)
++..-...+.+.|.++ ++ .+++.+||||||.++=.+....-+.++..|-....+-.+++.++.+
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 3444444555555432 34 7899999999999887777553332222221222234566666543
No 238
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=92.33 E-value=0.59 Score=38.44 Aligned_cols=60 Identities=8% Similarity=0.004 Sum_probs=45.9
Q ss_pred CCccccEEEEeeCCCCccChhhHHHHhhhcC--ceeEEecCCcccceeccchhhhHHHHHHHHhhh
Q 020741 257 PKSSIKVLVLGAKDDFIVDAQGLSETGSFYG--VLPVCVEGVAHDMMLDCSWEKGASVILSWLDGL 320 (322)
Q Consensus 257 ~~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 320 (322)
.++..|-.++.++.|...+++.+....+.++ +-+..+|+..|.... ..+.+.+..|+.+.
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n----~~i~esl~~flnrf 387 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLIN----QFIKESLEPFLNRF 387 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhH----HHHHHHHHHHHHHH
Confidence 3678899999999999999999998888885 677888999998653 33444555555443
No 239
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=91.46 E-value=8.8 Score=33.33 Aligned_cols=86 Identities=19% Similarity=0.083 Sum_probs=53.1
Q ss_pred CCCCcEEEEcCCCcchhhccc-chhhHhhhCCce-EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC---CCc
Q 020741 56 EKRPPLVFVHGSYHAAWCWAE-HWLPFFADSGFD-CYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS---LPP 130 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~~-~~~~~l~~~g~~-v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~---~~~ 130 (322)
-+.|..|..-|+-. ..-|.. .+.+.| |.. .+.-|.|=-|.+-.... ..--....+-|.+.|+ .|+ ..+
T Consensus 287 ~KPPL~VYFSGyR~-aEGFEgy~MMk~L---g~PfLL~~DpRleGGaFYlGs--~eyE~~I~~~I~~~L~-~LgF~~~qL 359 (511)
T TIGR03712 287 FKPPLNVYFSGYRP-AEGFEGYFMMKRL---GAPFLLIGDPRLEGGAFYLGS--DEYEQGIINVIQEKLD-YLGFDHDQL 359 (511)
T ss_pred CCCCeEEeeccCcc-cCcchhHHHHHhc---CCCeEEeeccccccceeeeCc--HHHHHHHHHHHHHHHH-HhCCCHHHe
Confidence 36677788888732 222210 123333 444 44558887777654433 1113334445556666 666 679
Q ss_pred EEEEechhHHHHHHHHHH
Q 020741 131 VLLGHSFGGLIIQYYIAR 148 (322)
Q Consensus 131 ~lvG~S~Gg~~a~~~a~~ 148 (322)
+|-|-|||..-|+.++++
T Consensus 360 ILSGlSMGTfgAlYYga~ 377 (511)
T TIGR03712 360 ILSGLSMGTFGALYYGAK 377 (511)
T ss_pred eeccccccchhhhhhccc
Confidence 999999999999999975
No 240
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=88.80 E-value=0.5 Score=37.32 Aligned_cols=32 Identities=28% Similarity=0.379 Sum_probs=23.9
Q ss_pred HHHHHHHHhCC-CCcEEEEechhHHHHHHHHHH
Q 020741 117 DVADFIQKNLS-LPPVLLGHSFGGLIIQYYIAR 148 (322)
Q Consensus 117 dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~ 148 (322)
|+...+.+..+ ..+.|-|||+||.+|..+..+
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~ 296 (425)
T COG5153 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIR 296 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccc
Confidence 33333443556 889999999999999988854
No 241
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=88.80 E-value=0.5 Score=37.32 Aligned_cols=32 Identities=28% Similarity=0.379 Sum_probs=23.9
Q ss_pred HHHHHHHHhCC-CCcEEEEechhHHHHHHHHHH
Q 020741 117 DVADFIQKNLS-LPPVLLGHSFGGLIIQYYIAR 148 (322)
Q Consensus 117 dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~ 148 (322)
|+...+.+..+ ..+.|-|||+||.+|..+..+
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~ 296 (425)
T KOG4540|consen 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIR 296 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccc
Confidence 33333443556 889999999999999988854
No 242
>PRK12467 peptide synthase; Provisional
Probab=88.51 E-value=3.6 Score=46.39 Aligned_cols=89 Identities=19% Similarity=0.184 Sum_probs=65.3
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEe
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LPPVLLGH 135 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~ 135 (322)
..+.+++.|...+....+. .+...+.. +..++.+..++.-..... ..++..++....+++..... .+..+.|+
T Consensus 3691 ~~~~l~~~h~~~r~~~~~~-~l~~~l~~-~~~~~~l~~~~~~~d~~~----~~~~~~~~~~y~~~~~~~~~~~p~~l~g~ 3764 (3956)
T PRK12467 3691 GFPALFCRHEGLGTVFDYE-PLAVILEG-DRHVLGLTCRHLLDDGWQ----DTSLQAMAVQYADYILWQQAKGPYGLLGW 3764 (3956)
T ss_pred cccceeeechhhcchhhhH-HHHHHhCC-CCcEEEEeccccccccCC----ccchHHHHHHHHHHHHHhccCCCeeeeee
Confidence 3456999999888777665 66666654 478888877765333222 24677788888888875555 78999999
Q ss_pred chhHHHHHHHHHHHhh
Q 020741 136 SFGGLIIQYYIARIRN 151 (322)
Q Consensus 136 S~Gg~~a~~~a~~~~~ 151 (322)
|+||.++..++..+.+
T Consensus 3765 s~g~~~a~~~~~~l~~ 3780 (3956)
T PRK12467 3765 SLGGTLARLVAELLER 3780 (3956)
T ss_pred ecchHHHHHHHHHHHH
Confidence 9999999999987654
No 243
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=87.47 E-value=3 Score=33.84 Aligned_cols=93 Identities=12% Similarity=0.049 Sum_probs=54.0
Q ss_pred CCCCcEEEEcCCCc--chhhcc--cchhhHhhh-CCceEEEeCCCCCCCCCCCCC--------------CCCCCHHHHHH
Q 020741 56 EKRPPLVFVHGSYH--AAWCWA--EHWLPFFAD-SGFDCYAVSLLGQGESDAPPG--------------TVAGSLQTHAG 116 (322)
Q Consensus 56 ~~~~~vl~~HG~~~--~~~~~~--~~~~~~l~~-~g~~v~~~D~~G~G~S~~~~~--------------~~~~~~~~~~~ 116 (322)
+.+..|+|+-|... +...+. -.+...|.. .+-+++++-.+|.|.-.-... .....+...+.
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 35567777777421 111111 123445554 577888888888886532211 01122333333
Q ss_pred HHHHHHHHhC--CCCcEEEEechhHHHHHHHHHH
Q 020741 117 DVADFIQKNL--SLPPVLLGHSFGGLIIQYYIAR 148 (322)
Q Consensus 117 dl~~~l~~~~--~~~~~lvG~S~Gg~~a~~~a~~ 148 (322)
....++-.+. ++.|+++|+|-|+.++--+|..
T Consensus 109 ~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 109 EAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 3334444344 3899999999999999999876
No 244
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=87.32 E-value=1 Score=39.43 Aligned_cols=120 Identities=16% Similarity=0.093 Sum_probs=72.2
Q ss_pred CCCCc--eEEEEEecCCCCCCCCCCCCCCCcEEEEcCCCcchhhcccc----hhhHhhhCCceEEEeCCCCCCCCCCC-C
Q 020741 32 LPSGL--NIEVIEQKSVTSKDPDTKNEKRPPLVFVHGSYHAAWCWAEH----WLPFFADSGFDCYAVSLLGQGESDAP-P 104 (322)
Q Consensus 32 ~~~g~--~l~~~~~~~~~~~~~~~~~~~~~~vl~~HG~~~~~~~~~~~----~~~~l~~~g~~v~~~D~~G~G~S~~~-~ 104 (322)
..++. .|.+..+-|. .=..-++.+-|.|-........ +...+ .+||.++.-|- ||..+... .
T Consensus 9 ~~~~~~~~i~fev~LP~---------~WNgR~~~~GgGG~~G~i~~~~~~~~~~~~~-~~G~A~~~TD~-Gh~~~~~~~~ 77 (474)
T PF07519_consen 9 PSDGSAPNIRFEVWLPD---------NWNGRFLQVGGGGFAGGINYADGKASMATAL-ARGYATASTDS-GHQGSAGSDD 77 (474)
T ss_pred cCCCCcceEEEEEECCh---------hhccCeEEECCCeeeCcccccccccccchhh-hcCeEEEEecC-CCCCCccccc
Confidence 33444 8888888865 2233455555544332222112 23344 57999999995 67655431 1
Q ss_pred CCCCCCHH-----------HHHHHHHHHHHHhCC---CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEE
Q 020741 105 GTVAGSLQ-----------THAGDVADFIQKNLS---LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVL 169 (322)
Q Consensus 105 ~~~~~~~~-----------~~~~dl~~~l~~~~~---~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl 169 (322)
.....+.+ +++.--.+++++..+ ..-+..|.|.||--++..|++ +|+ ..+++.
T Consensus 78 ~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQr------------yP~dfDGIlA 145 (474)
T PF07519_consen 78 ASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQR------------YPEDFDGILA 145 (474)
T ss_pred ccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHh------------ChhhcCeEEe
Confidence 11112222 222223455555555 446899999999999999966 998 999998
Q ss_pred eccCC
Q 020741 170 VCSVP 174 (322)
Q Consensus 170 ~~~~~ 174 (322)
-+|..
T Consensus 146 gaPA~ 150 (474)
T PF07519_consen 146 GAPAI 150 (474)
T ss_pred CCchH
Confidence 88753
No 245
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.82 E-value=2.9 Score=36.28 Aligned_cols=53 Identities=23% Similarity=0.320 Sum_probs=36.0
Q ss_pred HHHHHHHH-hCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCC-cceEEEeccCCCC
Q 020741 117 DVADFIQK-NLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSVPPS 176 (322)
Q Consensus 117 dl~~~l~~-~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~~~~ 176 (322)
.+.+.+.. ..| .||.|||+|+|+-+.+.....+.+++ .-+ |..+++++++.+.
T Consensus 434 lLAe~L~~r~qG~RPVTLVGFSLGARvIf~CL~~Lakkk-------e~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 434 LLAEALCKRSQGNRPVTLVGFSLGARVIFECLLELAKKK-------EVGIIENVILFGAPVPT 489 (633)
T ss_pred HHHHHHHHhccCCCceeEeeeccchHHHHHHHHHHhhcc-------cccceeeeeeccCCccC
Confidence 34444432 346 89999999999999998776654432 334 7788888765433
No 246
>PF03283 PAE: Pectinacetylesterase
Probab=86.23 E-value=7.3 Score=32.87 Aligned_cols=39 Identities=28% Similarity=0.237 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHh-CC--CCcEEEEechhHHHHHHHHHHHhh
Q 020741 113 THAGDVADFIQKN-LS--LPPVLLGHSFGGLIIQYYIARIRN 151 (322)
Q Consensus 113 ~~~~dl~~~l~~~-~~--~~~~lvG~S~Gg~~a~~~a~~~~~ 151 (322)
..++.+.+.|... ++ ++|+|.|.|.||.-++..+..+.+
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~ 179 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRD 179 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHH
Confidence 3334444433324 54 789999999999999998877654
No 247
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=85.72 E-value=5.4 Score=32.25 Aligned_cols=90 Identities=17% Similarity=0.182 Sum_probs=50.0
Q ss_pred CcEEEEcCCCcchhhcc-----cchhhHh-hhCCceEEEeCCCCCCCC--------CCCC-----CCCCCCHHHHHHHHH
Q 020741 59 PPLVFVHGSYHAAWCWA-----EHWLPFF-ADSGFDCYAVSLLGQGES--------DAPP-----GTVAGSLQTHAGDVA 119 (322)
Q Consensus 59 ~~vl~~HG~~~~~~~~~-----~~~~~~l-~~~g~~v~~~D~~G~G~S--------~~~~-----~~~~~~~~~~~~dl~ 119 (322)
..|||+=|.+.+...-. ..+.+.+ ...+-..+.+=.+|.|.. .... ......++..+.+..
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 35677777653332211 1233444 222335556666777771 1110 111234555555554
Q ss_pred HHHHHhC-C-CCcEEEEechhHHHHHHHHHH
Q 020741 120 DFIQKNL-S-LPPVLLGHSFGGLIIQYYIAR 148 (322)
Q Consensus 120 ~~l~~~~-~-~~~~lvG~S~Gg~~a~~~a~~ 148 (322)
.++.+.. + ++|.++|+|-|+..|-.++..
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 4443233 3 789999999999999999966
No 248
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=84.18 E-value=9.1 Score=29.24 Aligned_cols=72 Identities=17% Similarity=0.116 Sum_probs=51.9
Q ss_pred hhHhhhCCc-eEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEech----hHHHHHHHHHHHhhhh
Q 020741 79 LPFFADSGF-DCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLPPVLLGHSF----GGLIIQYYIARIRNEK 153 (322)
Q Consensus 79 ~~~l~~~g~-~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~lvG~S~----Gg~~a~~~a~~~~~~~ 153 (322)
...+...|. +|+..|.++. ..++.+.+++.+.++++ ..+..++|+|+|. |..++-++|++
T Consensus 69 ~~~l~~~G~d~V~~~~~~~~---------~~~~~e~~a~al~~~i~-~~~p~lVL~~~t~~~~~grdlaprlAar----- 133 (202)
T cd01714 69 LREALAMGADRAILVSDRAF---------AGADTLATAKALAAAIK-KIGVDLILTGKQSIDGDTGQVGPLLAEL----- 133 (202)
T ss_pred HHHHHHcCCCEEEEEecccc---------cCCChHHHHHHHHHHHH-HhCCCEEEEcCCcccCCcCcHHHHHHHH-----
Confidence 334445565 6777776532 14678899999999988 5567899999999 88999999988
Q ss_pred hccccCCCCCcceEEEe
Q 020741 154 MLEMETPYPEIAGAVLV 170 (322)
Q Consensus 154 ~~~~~~~~p~v~~~vl~ 170 (322)
+..+-+..++-+
T Consensus 134 -----Lga~lvsdv~~l 145 (202)
T cd01714 134 -----LGWPQITYVSKI 145 (202)
T ss_pred -----hCCCccceEEEE
Confidence 345555555555
No 249
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=79.07 E-value=5.3 Score=31.26 Aligned_cols=90 Identities=14% Similarity=0.079 Sum_probs=50.5
Q ss_pred CCCcEEEEcCCC--cchhhcccchhhHhhhCCceEEEeCCCCCC-----CCCC--CCCCCCCCHHHHHH--HHHHHHHHh
Q 020741 57 KRPPLVFVHGSY--HAAWCWAEHWLPFFADSGFDCYAVSLLGQG-----ESDA--PPGTVAGSLQTHAG--DVADFIQKN 125 (322)
Q Consensus 57 ~~~~vl~~HG~~--~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G-----~S~~--~~~~~~~~~~~~~~--dl~~~l~~~ 125 (322)
.++.|+|++=.+ .....|...+...|.+.|+.+..++...-- ..+. ...+....+-.... .+.+.|++.
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~ 109 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRVADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREA 109 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccchhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHH
Confidence 457799999876 344555545667788889998888765210 0000 00011111211111 234444434
Q ss_pred CCCCcEEEEechhHHHHHHHH
Q 020741 126 LSLPPVLLGHSFGGLIIQYYI 146 (322)
Q Consensus 126 ~~~~~~lvG~S~Gg~~a~~~a 146 (322)
+.....++|.|.|++++....
T Consensus 110 ~~~G~~~~G~SAGAii~~~~i 130 (233)
T PRK05282 110 VKNGTPYIGWSAGANVAGPTI 130 (233)
T ss_pred HHCCCEEEEECHHHHhhhccc
Confidence 445588999999998855444
No 250
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=75.15 E-value=6.1 Score=30.12 Aligned_cols=88 Identities=15% Similarity=0.145 Sum_probs=49.1
Q ss_pred CCCcEEEEcCCCcchhh--cccchhhHhhhCCceEEEeCCCCCCCCCCCC-----C----CCCCCHHHHHH----HHHHH
Q 020741 57 KRPPLVFVHGSYHAAWC--WAEHWLPFFADSGFDCYAVSLLGQGESDAPP-----G----TVAGSLQTHAG----DVADF 121 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~--~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~-----~----~~~~~~~~~~~----dl~~~ 121 (322)
.++.|.|++-.+.+... |.+...+.|.+.|..+..+++----...... + ....|+.-+.. -+.++
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~~~~~~~Ie~~l~~~d~IyVgGGNTF~LL~~lke~gld~i 110 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLSKPPLAAIENKLMKADIIYVGGGNTFNLLQELKETGLDDI 110 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeeccCCCHHHHHHhhhhccEEEECCchHHHHHHHHHHhCcHHH
Confidence 36789999987766554 5556677888899998888763100000000 0 11112211111 12334
Q ss_pred HHHhCCCCcEEEEechhHHHHHH
Q 020741 122 IQKNLSLPPVLLGHSFGGLIIQY 144 (322)
Q Consensus 122 l~~~~~~~~~lvG~S~Gg~~a~~ 144 (322)
|+++...-...+|+|.|+.++..
T Consensus 111 Ir~~vk~G~~YiG~SAGA~ia~p 133 (224)
T COG3340 111 IRERVKAGTPYIGWSAGANIAGP 133 (224)
T ss_pred HHHHHHcCCceEEeccCceeecC
Confidence 44344455678999999988743
No 251
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=74.45 E-value=4.6 Score=30.99 Aligned_cols=67 Identities=18% Similarity=0.279 Sum_probs=39.9
Q ss_pred CCCcEEEEcCCCcchhhcc--cchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 020741 57 KRPPLVFVHGSYHAAWCWA--EHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS 127 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~--~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~ 127 (322)
..++++++||.....-... ..+...|.+.|..+...-+++-|..-... ....+..+.+.+++++.++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~----~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNP----ENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSH----HHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCc----hhHHHHHHHHHHHHHHHcC
Confidence 4689999999754322221 24667788878766666555544321111 2344677778888886664
No 252
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=73.60 E-value=9.9 Score=29.31 Aligned_cols=86 Identities=16% Similarity=0.191 Sum_probs=52.4
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhC-CceEEEeCCCCCCCCCCCCC---------CCCCCHHHHHHH-----HHHH
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADS-GFDCYAVSLLGQGESDAPPG---------TVAGSLQTHAGD-----VADF 121 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~D~~G~G~S~~~~~---------~~~~~~~~~~~d-----l~~~ 121 (322)
..+.|+|+.-.......|...+...|.+. |+.+..++... ....... +. -+...+.+. +.+.
T Consensus 30 ~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~--~~~~~~~l~~ad~I~l~G-G~~~~~~~~l~~~~l~~~ 106 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFD--TEDPLDALLEADVIYVGG-GNTFNLLAQWREHGLDAI 106 (212)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccC--cccHHHHHhcCCEEEECC-chHHHHHHHHHHcCHHHH
Confidence 56789999987766555555677788888 99988887643 1110000 11 122222222 3344
Q ss_pred HHHhCCCCcEEEEechhHHHHHHH
Q 020741 122 IQKNLSLPPVLLGHSFGGLIIQYY 145 (322)
Q Consensus 122 l~~~~~~~~~lvG~S~Gg~~a~~~ 145 (322)
|+....+...++|.|.|+++....
T Consensus 107 l~~~~~~g~~i~G~SAGa~i~~~~ 130 (212)
T cd03146 107 LKAALERGVVYIGWSAGSNCWFPS 130 (212)
T ss_pred HHHHHHCCCEEEEECHhHHhhCCC
Confidence 443334568899999999988663
No 253
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=73.50 E-value=7 Score=31.03 Aligned_cols=90 Identities=12% Similarity=0.196 Sum_probs=47.8
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCce-EEEeCCCCCCCCCCCCC-----------CCCCCHHHHHH-----HHH
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFD-CYAVSLLGQGESDAPPG-----------TVAGSLQTHAG-----DVA 119 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~-v~~~D~~G~G~S~~~~~-----------~~~~~~~~~~~-----dl~ 119 (322)
..+.|++++-.++....+.+.+.+.|.+.|+. |-.++.+.......+.. ...-+...+.+ .+.
T Consensus 27 ~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~~r~~a~~~~~~~~l~~ad~I~~~GGnq~~l~~~l~~t~l~ 106 (250)
T TIGR02069 27 EDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVREREDASDENAIALLSNATGIFFTGGDQLRITSLLGDTPLL 106 (250)
T ss_pred CCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecCChHHccCHHHHHHHhhCCEEEEeCCCHHHHHHHHcCCcHH
Confidence 55789999976655544444567778888884 55666642111110000 00011111111 123
Q ss_pred HHHHHhCCCCcEEEEechhHHHHHHHH
Q 020741 120 DFIQKNLSLPPVLLGHSFGGLIIQYYI 146 (322)
Q Consensus 120 ~~l~~~~~~~~~lvG~S~Gg~~a~~~a 146 (322)
+.|++.+.+-.+++|.|.|+++.....
T Consensus 107 ~~l~~~~~~G~vi~G~SAGA~i~~~~~ 133 (250)
T TIGR02069 107 DRLRKRVHEGIILGGTSAGAAVMSDTM 133 (250)
T ss_pred HHHHHHHHcCCeEEEccHHHHhcccce
Confidence 444434444588999999999865444
No 254
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=72.92 E-value=22 Score=23.62 Aligned_cols=63 Identities=16% Similarity=0.182 Sum_probs=39.3
Q ss_pred cchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEechhHH
Q 020741 76 EHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGGL 140 (322)
Q Consensus 76 ~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~ 140 (322)
..+.+.+...||..=.+.++..|.+-...-. ....+.=...+..+++ ..+ .++++||=|--.=
T Consensus 14 ~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~-~~~~~~K~~~i~~i~~-~fP~~kfiLIGDsgq~D 77 (100)
T PF09949_consen 14 PFLRDFLRRNGFPAGPLLLRDYGPSLSGLFK-SGAEEHKRDNIERILR-DFPERKFILIGDSGQHD 77 (100)
T ss_pred HHHHHHHHhcCCCCCceEcccCCcccccccc-CCchhHHHHHHHHHHH-HCCCCcEEEEeeCCCcC
Confidence 3566677777787777777777554322210 0111344456677777 777 8999999886554
No 255
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=72.67 E-value=5.6 Score=33.70 Aligned_cols=60 Identities=8% Similarity=0.054 Sum_probs=39.2
Q ss_pred CccccEEEEeeCCCCccChhhHHHHhhhcCceeEEecCCcccceecc----chhhhHHHHHHHHh
Q 020741 258 KSSIKVLVLGAKDDFIVDAQGLSETGSFYGVLPVCVEGVAHDMMLDC----SWEKGASVILSWLD 318 (322)
Q Consensus 258 ~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~----~~~~~~~~i~~fl~ 318 (322)
.-.-.+|+|+|++|+...... ......-+..+.+.||++|...+.. .+++....|.+|..
T Consensus 349 ~~~~rmlFVYG~nDPW~A~~f-~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 349 NNGPRMLFVYGENDPWSAEPF-RLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred hCCCeEEEEeCCCCCcccCcc-ccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 345689999999998854321 1111122477778899999866532 24677778888863
No 256
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=71.86 E-value=13 Score=28.33 Aligned_cols=62 Identities=13% Similarity=0.223 Sum_probs=37.1
Q ss_pred CCCCcEEEEcCCCcchhhcccchhhHhhhCCc-eEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEE
Q 020741 56 EKRPPLVFVHGSYHAAWCWAEHWLPFFADSGF-DCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LPPVLL 133 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~-~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lv 133 (322)
++..+|++.||..+.+...+..+-..|.+.|| .|+....-|+ -.++++.+.++ .-+ ++++|+
T Consensus 136 k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~y---------------P~~d~vi~~l~-~~~~~~v~L~ 199 (265)
T COG4822 136 KDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGY---------------PLVDTVIEYLR-KNGIKEVHLI 199 (265)
T ss_pred cCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCC---------------CcHHHHHHHHH-HcCCceEEEe
Confidence 35668899999877766555344455667788 5665554433 01456666666 334 555443
No 257
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=68.55 E-value=8 Score=28.68 Aligned_cols=61 Identities=10% Similarity=0.095 Sum_probs=39.2
Q ss_pred CCCcEEEEcCCCcchhhc-ccchhhHhhhCCceEEEeCCC--CCCCCCCCCCCCCCCHHHHHHHHHHH
Q 020741 57 KRPPLVFVHGSYHAAWCW-AEHWLPFFADSGFDCYAVSLL--GQGESDAPPGTVAGSLQTHAGDVADF 121 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~-~~~~~~~l~~~g~~v~~~D~~--G~G~S~~~~~~~~~~~~~~~~dl~~~ 121 (322)
.++.+|++-|+.++..+- ...+.+.|.+.|++++..|== =||.+... .++-++-.+.+..+
T Consensus 21 ~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL~~dL----gFs~edR~eniRRv 84 (197)
T COG0529 21 QKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGDNVRHGLNRDL----GFSREDRIENIRRV 84 (197)
T ss_pred CCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecChhHhhcccCCC----CCChHHHHHHHHHH
Confidence 667899999997665432 234667788899999999832 24444332 34555555555444
No 258
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=65.04 E-value=21 Score=32.85 Aligned_cols=67 Identities=16% Similarity=0.277 Sum_probs=40.5
Q ss_pred CCCCcEEEEcCCCcchhhcc--cchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 020741 56 EKRPPLVFVHGSYHAAWCWA--EHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNL 126 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~--~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~ 126 (322)
+-+.++|++||.....-... ..+...|...|..|-..-+|+-|.+-... .......+.+.+++++++
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~----~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRP----ENRVKVLKEILDWFKRHL 617 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCc----hhHHHHHHHHHHHHHHHh
Confidence 46788999999753322211 24677888888877666666544333222 245556666667766554
No 259
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=64.79 E-value=7.4 Score=27.01 Aligned_cols=59 Identities=12% Similarity=0.179 Sum_probs=35.3
Q ss_pred CCCCcEEEEcCCCcchhhcc-cchhhHhhhCCce---EE----EeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 020741 56 EKRPPLVFVHGSYHAAWCWA-EHWLPFFADSGFD---CY----AVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKN 125 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~-~~~~~~l~~~g~~---v~----~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~ 125 (322)
+.+|.|+-+||+.|....|. ..+++.|-..|.. |. ..|+| ....++++-++|...|...
T Consensus 50 p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~~hFP-----------~~~~v~~Yk~~L~~~I~~~ 116 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIATHHFP-----------HNSNVDEYKEQLKSWIRGN 116 (127)
T ss_pred CCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeecccccCC-----------CchHHHHHHHHHHHHHHHH
Confidence 58899999999988877765 2344554444432 22 22332 1245667777777776643
No 260
>KOG3062 consensus RNA polymerase II elongator associated protein [General function prediction only]
Probab=63.79 E-value=46 Score=25.99 Aligned_cols=83 Identities=13% Similarity=0.061 Sum_probs=47.7
Q ss_pred cEEEEcCCCcchhhcc-cchhhHhhhCC--ceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEe
Q 020741 60 PLVFVHGSYHAAWCWA-EHWLPFFADSG--FDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LPPVLLGH 135 (322)
Q Consensus 60 ~vl~~HG~~~~~~~~~-~~~~~~l~~~g--~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~ 135 (322)
++|++-|.+.+...-. ..+.+.|.++| +.|+..|--..|--........-.-...-.++...+++.+. .+++++ -
T Consensus 2 pLVvi~G~P~SGKstrA~~L~~~l~~~~~K~~v~ii~deslg~~~ns~y~~s~~EK~lRg~L~S~v~R~Lsk~~iVI~-D 80 (281)
T KOG3062|consen 2 PLVVICGLPCSGKSTRAVELREALKERGTKQSVRIIDDESLGIEKNSNYGDSQAEKALRGKLRSAVDRSLSKGDIVIV-D 80 (281)
T ss_pred CeEEEeCCCCCCchhHHHHHHHHHHhhcccceEEEechhhcCCCCcccccccHHHHHHHHHHHHHHHhhcccCcEEEE-e
Confidence 5788889876655433 35677888776 46777775544433322221122344455678888887888 555554 3
Q ss_pred chhHHHHH
Q 020741 136 SFGGLIIQ 143 (322)
Q Consensus 136 S~Gg~~a~ 143 (322)
|+--+-+.
T Consensus 81 slNyIKGf 88 (281)
T KOG3062|consen 81 SLNYIKGF 88 (281)
T ss_pred cccccccc
Confidence 44333333
No 261
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=61.53 E-value=24 Score=27.12 Aligned_cols=59 Identities=22% Similarity=0.470 Sum_probs=36.1
Q ss_pred CCCcEEEEcCCCcch--hhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 020741 57 KRPPLVFVHGSYHAA--WCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQK 124 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~--~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~ 124 (322)
.+.+|+++||-.... ..+.+...+.|.+.|.+|-.-.++|-|.+ ...+..+++.++|++
T Consensus 154 ~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~---------i~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 154 AKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHE---------ISPEELRDLREFLEK 214 (216)
T ss_dssp CTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-----------HHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCC---------CCHHHHHHHHHHHhh
Confidence 356899999975443 22334567788888887777777755433 335667778888774
No 262
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=61.51 E-value=8.4 Score=31.86 Aligned_cols=27 Identities=22% Similarity=0.418 Sum_probs=21.3
Q ss_pred HHHHHHhCC-CCcEEEEechhHHHHHHHH
Q 020741 119 ADFIQKNLS-LPPVLLGHSFGGLIIQYYI 146 (322)
Q Consensus 119 ~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a 146 (322)
.++++ ..| .|-.++|||+|=..|+.++
T Consensus 75 ~~~l~-~~Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 75 ARLLR-SWGIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHHHH-HTTHCESEEEESTTHHHHHHHHT
T ss_pred hhhhc-ccccccceeeccchhhHHHHHHC
Confidence 34454 567 8899999999998888765
No 263
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=60.95 E-value=19 Score=27.88 Aligned_cols=90 Identities=13% Similarity=0.131 Sum_probs=47.6
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCce-EEEeCCCCCCCCCCCCC-----------CCCCCHHHHHH-----HHH
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFD-CYAVSLLGQGESDAPPG-----------TVAGSLQTHAG-----DVA 119 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~-v~~~D~~G~G~S~~~~~-----------~~~~~~~~~~~-----dl~ 119 (322)
..+.|+++.-.+.....+.+.+.+.|.+.|+. +..++....-.+..+.. ...-+...+.+ .+.
T Consensus 28 ~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~v~~~~~~~~~~a~~~~~~~~l~~ad~I~~~GG~~~~~~~~l~~t~l~ 107 (217)
T cd03145 28 AGARIVVIPAASEEPAEVGEEYRDVFERLGAREVEVLVIDSREAANDPEVVARLRDADGIFFTGGDQLRITSALGGTPLL 107 (217)
T ss_pred CCCcEEEEeCCCcChhHHHHHHHHHHHHcCCceeEEeccCChHHcCCHHHHHHHHhCCEEEEeCCcHHHHHHHHcCChHH
Confidence 45677887766555444444566777777774 55555542211111100 00011112222 133
Q ss_pred HHHHHhCCCCcEEEEechhHHHHHHHH
Q 020741 120 DFIQKNLSLPPVLLGHSFGGLIIQYYI 146 (322)
Q Consensus 120 ~~l~~~~~~~~~lvG~S~Gg~~a~~~a 146 (322)
+.|...+..-.+++|.|.|+++.....
T Consensus 108 ~~l~~~~~~G~v~~G~SAGA~i~~~~~ 134 (217)
T cd03145 108 DALRKVYRGGVVIGGTSAGAAVMSDTM 134 (217)
T ss_pred HHHHHHHHcCCEEEEccHHHHhhhhcc
Confidence 344434446688999999999976654
No 264
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=60.59 E-value=79 Score=27.17 Aligned_cols=88 Identities=13% Similarity=0.107 Sum_probs=51.5
Q ss_pred cEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCC--------C-------------CCCCHHHHHHHH
Q 020741 60 PLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPG--------T-------------VAGSLQTHAGDV 118 (322)
Q Consensus 60 ~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~--------~-------------~~~~~~~~~~dl 118 (322)
+|+++--+-.-...+. .+.+.+.+.|..++.+|.-=.|......+ . ....++.+.+-+
T Consensus 3 tI~iigT~DTK~~E~~-yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 3 TIAIIGTLDTKGEELL-YLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred EEEEEEccCCCHHHHH-HHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 4444444333344443 66777888999999999754444433322 0 001223333444
Q ss_pred HHHHHHhCC-C---CcEEEEechhHHHHHHHHHH
Q 020741 119 ADFIQKNLS-L---PPVLLGHSFGGLIIQYYIAR 148 (322)
Q Consensus 119 ~~~l~~~~~-~---~~~lvG~S~Gg~~a~~~a~~ 148 (322)
..++..... . -++-+|-|.|..++....+.
T Consensus 82 ~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~ 115 (403)
T PF06792_consen 82 ARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRA 115 (403)
T ss_pred HHHHHHHHhcCCccEEEEecCCccHHHHHHHHHh
Confidence 555553333 3 35678999999999999865
No 265
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=60.06 E-value=15 Score=30.41 Aligned_cols=30 Identities=27% Similarity=0.339 Sum_probs=22.0
Q ss_pred HHHHHHHhCCCC----c-EEEEechhHHHHHHHHH
Q 020741 118 VADFIQKNLSLP----P-VLLGHSFGGLIIQYYIA 147 (322)
Q Consensus 118 l~~~l~~~~~~~----~-~lvG~S~Gg~~a~~~a~ 147 (322)
+...|++.++.+ + .+.|.|.||.+|..++.
T Consensus 17 vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~ 51 (312)
T cd07212 17 MLIAIEKALGRPIRELFDWIAGTSTGGILALALLH 51 (312)
T ss_pred HHHHHHHHhCCCchhhccEEEeeChHHHHHHHHHc
Confidence 445555445544 3 58999999999999984
No 266
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=59.68 E-value=10 Score=29.53 Aligned_cols=35 Identities=9% Similarity=0.228 Sum_probs=25.9
Q ss_pred CCcEEEEcCCC-cchhhcccchhhHhhhCCceEEEeC
Q 020741 58 RPPLVFVHGSY-HAAWCWAEHWLPFFADSGFDCYAVS 93 (322)
Q Consensus 58 ~~~vl~~HG~~-~~~~~~~~~~~~~l~~~g~~v~~~D 93 (322)
...||++|... .+.... +.+++.|.++||+++.++
T Consensus 186 ~g~IiLlHd~~~~t~~aL-~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 186 PGAILLLHAVSKDNAEAL-DKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CCcEEEEECCCCCHHHHH-HHHHHHHHHCCCEEEEhH
Confidence 34699999753 344444 478999999999998875
No 267
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=58.39 E-value=15 Score=30.02 Aligned_cols=26 Identities=23% Similarity=0.512 Sum_probs=20.7
Q ss_pred HHHHHhCC-CCcEEEEechhHHHHHHHH
Q 020741 120 DFIQKNLS-LPPVLLGHSFGGLIIQYYI 146 (322)
Q Consensus 120 ~~l~~~~~-~~~~lvG~S~Gg~~a~~~a 146 (322)
+.+. ..+ .+-.++|||+|-..|+.++
T Consensus 74 ~~l~-~~Gi~p~~~~GhSlGE~aA~~~a 100 (298)
T smart00827 74 RLWR-SWGVRPDAVVGHSLGEIAAAYVA 100 (298)
T ss_pred HHHH-HcCCcccEEEecCHHHHHHHHHh
Confidence 4444 567 8889999999999888776
No 268
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=57.35 E-value=33 Score=26.89 Aligned_cols=70 Identities=14% Similarity=0.057 Sum_probs=45.6
Q ss_pred CCCcEEEEcCCCcchh-hcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHhCC--CCcEE
Q 020741 57 KRPPLVFVHGSYHAAW-CWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGD-VADFIQKNLS--LPPVL 132 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~d-l~~~l~~~~~--~~~~l 132 (322)
+.|+||++.|+.++.. .-...+...|-.+|++|.++..| +.++...+ +-.+-. .++ +.+.+
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p--------------t~eE~~~p~lwRfw~-~lP~~G~i~I 93 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP--------------SDRERTQWYFQRYVQ-HLPAAGEIVL 93 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC--------------CHHHHcChHHHHHHH-hCCCCCeEEE
Confidence 4689999999954433 22235677777789999998876 33333333 334444 666 78888
Q ss_pred EEechhHHH
Q 020741 133 LGHSFGGLI 141 (322)
Q Consensus 133 vG~S~Gg~~ 141 (322)
+=-|+=+-+
T Consensus 94 F~rSwY~~~ 102 (230)
T TIGR03707 94 FDRSWYNRA 102 (230)
T ss_pred EeCchhhhH
Confidence 877775554
No 269
>COG0218 Predicted GTPase [General function prediction only]
Probab=56.70 E-value=14 Score=28.00 Aligned_cols=57 Identities=18% Similarity=0.170 Sum_probs=34.5
Q ss_pred CccccEEEEeeCCCCccChhhH---HHHhhhcC----ce--eEEecCCcccceeccchhhhHHHHHHHHhh
Q 020741 258 KSSIKVLVLGAKDDFIVDAQGL---SETGSFYG----VL--PVCVEGVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 258 ~~~~Pvl~i~g~~D~~~~~~~~---~~~~~~~~----~~--~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
...+|++++.-.-|.+-..+.. ....+.+. .. ++.++-..... .+++.+.|.+|+..
T Consensus 133 ~~~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k~G-----i~~l~~~i~~~~~~ 198 (200)
T COG0218 133 ELGIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKKKG-----IDELKAKILEWLKE 198 (200)
T ss_pred HcCCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEecccccC-----HHHHHHHHHHHhhc
Confidence 4678999999999999765443 33333332 22 33443322221 36778888888765
No 270
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=56.31 E-value=9.7 Score=34.06 Aligned_cols=42 Identities=10% Similarity=-0.026 Sum_probs=30.3
Q ss_pred cccEEEEeeCCCCccChhhHHHHhhhc---------CceeEEecCCcccce
Q 020741 260 SIKVLVLGAKDDFIVDAQGLSETGSFY---------GVLPVCVEGVAHDMM 301 (322)
Q Consensus 260 ~~Pvl~i~g~~D~~~~~~~~~~~~~~~---------~~~~~~~~~~gH~~~ 301 (322)
..|.++++|..|-++|.....+.+-.+ ...+++++++-|+-.
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDa 605 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDA 605 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechh
Confidence 689999999999999975443322211 167888899888753
No 271
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=55.68 E-value=18 Score=29.52 Aligned_cols=26 Identities=19% Similarity=0.186 Sum_probs=20.2
Q ss_pred HHHHHhCC-CCcEEEEechhHHHHHHHH
Q 020741 120 DFIQKNLS-LPPVLLGHSFGGLIIQYYI 146 (322)
Q Consensus 120 ~~l~~~~~-~~~~lvG~S~Gg~~a~~~a 146 (322)
+.++ ..+ .+..++|||+|-..|+.++
T Consensus 68 ~~l~-~~g~~P~~v~GhS~GE~aAa~~a 94 (295)
T TIGR03131 68 RALL-ALLPRPSAVAGYSVGEYAAAVVA 94 (295)
T ss_pred HHHH-hcCCCCcEEeecCHHHHHHHHHh
Confidence 3344 446 8899999999998888776
No 272
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=55.45 E-value=1.3 Score=35.70 Aligned_cols=88 Identities=24% Similarity=0.194 Sum_probs=52.7
Q ss_pred CCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCC----------CCCCCCCCCCHHH--------HHHH
Q 020741 56 EKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGES----------DAPPGTVAGSLQT--------HAGD 117 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S----------~~~~~~~~~~~~~--------~~~d 117 (322)
..-|.+++.||++....... .....+++.++.++..+...+|.+ ..... ...... ...+
T Consensus 47 ~~~p~v~~~h~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 123 (299)
T COG1073 47 KKLPAVVFLHGFGSSKEQSL-GYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAE--DFSAAVLLLLSEGVLDKD 123 (299)
T ss_pred ccCceEEeccCccccccCcc-hHHHHhhhceeEEeeeccccccccccccccccCcccccc--ccchhheeeeccccccHH
Confidence 46889999999988877765 467888888898887764333222 22111 011000 1111
Q ss_pred HHHHHHHhCCCCcEEEEechhHHHHHHHHHH
Q 020741 118 VADFIQKNLSLPPVLLGHSFGGLIIQYYIAR 148 (322)
Q Consensus 118 l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~ 148 (322)
...... ...+....|+++|+..+..++..
T Consensus 124 ~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~ 152 (299)
T COG1073 124 YRLLGA--SLGPRILAGLSLGGPSAGALLAW 152 (299)
T ss_pred HHHHhh--hcCcceEEEEEeeccchHHHhhc
Confidence 111111 12678888888888888888754
No 273
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=55.36 E-value=26 Score=30.69 Aligned_cols=80 Identities=20% Similarity=0.197 Sum_probs=42.2
Q ss_pred CCCcEEEEcCCC---cc--hhhcccchhhHhhhCC-ceEEEeCCC----C---C-CCCCCCCCCCCCCHHH---HHHHHH
Q 020741 57 KRPPLVFVHGSY---HA--AWCWAEHWLPFFADSG-FDCYAVSLL----G---Q-GESDAPPGTVAGSLQT---HAGDVA 119 (322)
Q Consensus 57 ~~~~vl~~HG~~---~~--~~~~~~~~~~~l~~~g-~~v~~~D~~----G---~-G~S~~~~~~~~~~~~~---~~~dl~ 119 (322)
+..++|.+-|.| ++ -..|+ .+.|+..+ --|+.+++| | . |..+.+.. ..+-+ ....+.
T Consensus 134 n~tVlVWiyGGGF~sGt~SLdvYd---Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGN---mGl~DQqLAl~WV~ 207 (601)
T KOG4389|consen 134 NLTVLVWIYGGGFYSGTPSLDVYD---GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGN---MGLLDQQLALQWVQ 207 (601)
T ss_pred CceEEEEEEcCccccCCcceeeec---cceeeeeccEEEEEeeeeeccceEEecCCCCCCCCc---cchHHHHHHHHHHH
Confidence 455778888864 22 22333 34555442 344455554 1 2 22222222 23322 234555
Q ss_pred HHHHHhCC---CCcEEEEechhHHHHH
Q 020741 120 DFIQKNLS---LPPVLLGHSFGGLIIQ 143 (322)
Q Consensus 120 ~~l~~~~~---~~~~lvG~S~Gg~~a~ 143 (322)
+-|. ..| .+|.|+|.|.|+.-..
T Consensus 208 ~Ni~-aFGGnp~~vTLFGESAGaASv~ 233 (601)
T KOG4389|consen 208 ENIA-AFGGNPSRVTLFGESAGAASVV 233 (601)
T ss_pred HhHH-HhCCCcceEEEeccccchhhhh
Confidence 6566 343 6799999999987543
No 274
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=54.89 E-value=35 Score=23.76 Aligned_cols=14 Identities=14% Similarity=0.311 Sum_probs=10.9
Q ss_pred hhHhhhCCceEEEe
Q 020741 79 LPFFADSGFDCYAV 92 (322)
Q Consensus 79 ~~~l~~~g~~v~~~ 92 (322)
+..|.+.|++|+.+
T Consensus 101 ~~~L~~~GwrvlvV 114 (150)
T COG3727 101 IKRLQQLGWRVLVV 114 (150)
T ss_pred HHHHHHcCCeEEEE
Confidence 56777889998865
No 275
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=54.61 E-value=30 Score=27.75 Aligned_cols=70 Identities=13% Similarity=0.022 Sum_probs=44.2
Q ss_pred CCCcEEEEcCCCcchh-hcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHhCC--CCcEE
Q 020741 57 KRPPLVFVHGSYHAAW-CWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGD-VADFIQKNLS--LPPVL 132 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~d-l~~~l~~~~~--~~~~l 132 (322)
..|+||++.|+.++.. .-...+...|-.+|++|.++..| +-++...+ +-.+-. .++ +.+.|
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P--------------t~eE~~~p~lWRfw~-~lP~~G~i~I 118 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP--------------SAEELDHDFLWRIHK-ALPERGEIGI 118 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC--------------CHHHHcCchHHHHHH-hCCCCCeEEE
Confidence 4589999999954433 22235677777789999999765 22222332 334444 665 77888
Q ss_pred EEechhHHH
Q 020741 133 LGHSFGGLI 141 (322)
Q Consensus 133 vG~S~Gg~~ 141 (322)
+=-|+=+-+
T Consensus 119 F~RSWY~~v 127 (264)
T TIGR03709 119 FNRSHYEDV 127 (264)
T ss_pred EcCccccch
Confidence 777764443
No 276
>PRK10279 hypothetical protein; Provisional
Probab=52.42 E-value=26 Score=28.79 Aligned_cols=29 Identities=21% Similarity=0.353 Sum_probs=21.9
Q ss_pred HHHHHHHhCC-CCcEEEEechhHHHHHHHHH
Q 020741 118 VADFIQKNLS-LPPVLLGHSFGGLIIQYYIA 147 (322)
Q Consensus 118 l~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~ 147 (322)
+.+.++ ..+ ..-.++|.|+|+.++..+|.
T Consensus 23 VL~aL~-E~gi~~d~i~GtS~GAlvga~yA~ 52 (300)
T PRK10279 23 VINALK-KVGIEIDIVAGCSIGSLVGAAYAC 52 (300)
T ss_pred HHHHHH-HcCCCcCEEEEEcHHHHHHHHHHc
Confidence 344444 345 66689999999999999994
No 277
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=51.18 E-value=12 Score=28.15 Aligned_cols=34 Identities=12% Similarity=0.308 Sum_probs=23.9
Q ss_pred CcEEEEcCC---CcchhhcccchhhHhhhCCceEEEeC
Q 020741 59 PPLVFVHGS---YHAAWCWAEHWLPFFADSGFDCYAVS 93 (322)
Q Consensus 59 ~~vl~~HG~---~~~~~~~~~~~~~~l~~~g~~v~~~D 93 (322)
..||++|.. ..+.... +.+++.|.++||+++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l-~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKAL-PTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHH-HHHHHHHHHCCCEEEEHH
Confidence 459999942 2233333 468899999999998874
No 278
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=50.15 E-value=40 Score=27.23 Aligned_cols=39 Identities=18% Similarity=0.117 Sum_probs=26.6
Q ss_pred CCcEEEEechhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccCC
Q 020741 128 LPPVLLGHSFGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSVP 174 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~~ 174 (322)
.+++|.|.|+|+.-+........+ ....+.+.+..+++.
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~--------~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDD--------LRDRVDGALWVGPPF 147 (289)
T ss_pred CeEEEeccCccccchhhhhccHHH--------hhhhcceEEEeCCCC
Confidence 569999999999887766533221 123388888877643
No 279
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=49.83 E-value=1.3e+02 Score=24.08 Aligned_cols=73 Identities=16% Similarity=0.224 Sum_probs=45.3
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCc-eEEEeCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhCCCCcEE-E
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGF-DCYAVSLLGQGESDA-PPGTVAGSLQTHAGDVADFIQKNLSLPPVL-L 133 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~-~v~~~D~~G~G~S~~-~~~~~~~~~~~~~~dl~~~l~~~~~~~~~l-v 133 (322)
.+.+|++--|...+...|. ..++.+.+.|- +++... +| -|.. +......++..+ ..+++..+-+|.+ .
T Consensus 131 ~gkPVilk~G~~~t~~e~~-~Ave~i~~~Gn~~i~l~~-rG--~s~y~~~~~~~~dl~~i-----~~lk~~~~~pV~~ds 201 (260)
T TIGR01361 131 QGKPVLLKRGMGNTIEEWL-YAAEYILSSGNGNVILCE-RG--IRTFEKATRNTLDLSAV-----PVLKKETHLPIIVDP 201 (260)
T ss_pred CCCcEEEeCCCCCCHHHHH-HHHHHHHHcCCCcEEEEE-CC--CCCCCCCCcCCcCHHHH-----HHHHHhhCCCEEEcC
Confidence 5778999999998999997 77888887776 455544 33 3333 222112222222 2333234578888 7
Q ss_pred Eechh
Q 020741 134 GHSFG 138 (322)
Q Consensus 134 G~S~G 138 (322)
+||.|
T Consensus 202 ~Hs~G 206 (260)
T TIGR01361 202 SHAAG 206 (260)
T ss_pred CCCCC
Confidence 99988
No 280
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=49.43 E-value=31 Score=28.45 Aligned_cols=30 Identities=20% Similarity=0.278 Sum_probs=22.0
Q ss_pred HHHHHHHhCC-CCcEEEEechhHHHHHHHHHH
Q 020741 118 VADFIQKNLS-LPPVLLGHSFGGLIIQYYIAR 148 (322)
Q Consensus 118 l~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~ 148 (322)
+.+.++ ..+ ..-.++|.|+|+.++..++..
T Consensus 33 vL~aLe-e~gi~~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 33 VIKALE-EAGIPVDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHH-HcCCCCCEEEEECHHHHHHHHHHcC
Confidence 444444 346 555799999999999999953
No 281
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=49.03 E-value=35 Score=25.17 Aligned_cols=20 Identities=20% Similarity=0.399 Sum_probs=17.7
Q ss_pred CCcEEEEechhHHHHHHHHH
Q 020741 128 LPPVLLGHSFGGLIIQYYIA 147 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~a~~~a~ 147 (322)
..-.+.|-|.|+.++..++.
T Consensus 26 ~~d~v~GtSaGAi~aa~~a~ 45 (172)
T cd07198 26 LIDIIAGTSAGAIVAALLAS 45 (172)
T ss_pred CCCEEEEECHHHHHHHHHHc
Confidence 56689999999999999994
No 282
>PLN02748 tRNA dimethylallyltransferase
Probab=48.64 E-value=1e+02 Score=27.21 Aligned_cols=78 Identities=17% Similarity=0.188 Sum_probs=46.8
Q ss_pred CCCCcEEEEcCCCcchhhcccchhhHhhhC-CceEEEeC----CCCC--CCCCCC---------------CCCCCCCHHH
Q 020741 56 EKRPPLVFVHGSYHAAWCWAEHWLPFFADS-GFDCYAVS----LLGQ--GESDAP---------------PGTVAGSLQT 113 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~D----~~G~--G~S~~~---------------~~~~~~~~~~ 113 (322)
..++.+|+|-|-.++... .++-.|+.+ +..++..| ++|. |..... .....|+..+
T Consensus 19 ~~~~~~i~i~GptgsGKs---~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~ 95 (468)
T PLN02748 19 KGKAKVVVVMGPTGSGKS---KLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKD 95 (468)
T ss_pred CCCCCEEEEECCCCCCHH---HHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHH
Confidence 355667888887555443 234455554 45788888 3443 211111 0135689999
Q ss_pred HHHHHHHHHHHhCC--CCcEEEEec
Q 020741 114 HAGDVADFIQKNLS--LPPVLLGHS 136 (322)
Q Consensus 114 ~~~dl~~~l~~~~~--~~~~lvG~S 136 (322)
+.++....|+.... +-.+|||-|
T Consensus 96 F~~~A~~~I~~I~~rgk~PIlVGGT 120 (468)
T PLN02748 96 FRDHAVPLIEEILSRNGLPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEcCh
Confidence 99999999986554 445677754
No 283
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=48.40 E-value=19 Score=29.04 Aligned_cols=34 Identities=12% Similarity=0.289 Sum_probs=26.6
Q ss_pred CcEEEEcCCCcchhhcccchhhHhhhCCceEEEeC
Q 020741 59 PPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVS 93 (322)
Q Consensus 59 ~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D 93 (322)
..||++|-...+.... +.+++.|.++||+++.++
T Consensus 231 G~IILmHd~~~T~~aL-~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGL-EEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHH-HHHHHHHHHCCCEEEeHH
Confidence 4689999865555554 478999999999998875
No 284
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=48.18 E-value=1.3e+02 Score=24.02 Aligned_cols=40 Identities=18% Similarity=0.243 Sum_probs=31.4
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCC
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQ 97 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~ 97 (322)
.+.+|++--|...+...|. ..++.+.+.|-.=+.+-.||.
T Consensus 121 tgkPVilk~G~~~t~~e~~-~A~e~i~~~Gn~~i~L~eRg~ 160 (250)
T PRK13397 121 IDKPILFKRGLMATIEEYL-GALSYLQDTGKSNIILCERGV 160 (250)
T ss_pred cCCeEEEeCCCCCCHHHHH-HHHHHHHHcCCCeEEEEcccc
Confidence 5788999999889999997 788999888875455555555
No 285
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=47.80 E-value=22 Score=25.88 Aligned_cols=36 Identities=11% Similarity=0.150 Sum_probs=24.9
Q ss_pred CCcEEEEcCCCcchhh-cccchhhHhhhCCceEEEeC
Q 020741 58 RPPLVFVHGSYHAAWC-WAEHWLPFFADSGFDCYAVS 93 (322)
Q Consensus 58 ~~~vl~~HG~~~~~~~-~~~~~~~~l~~~g~~v~~~D 93 (322)
++.||++-|..++... -...+.+.|.+.|+.++.+|
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LD 37 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLD 37 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEec
Confidence 3679999999766543 22346677778899999997
No 286
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=47.76 E-value=35 Score=25.67 Aligned_cols=20 Identities=20% Similarity=0.233 Sum_probs=17.5
Q ss_pred CCcEEEEechhHHHHHHHHH
Q 020741 128 LPPVLLGHSFGGLIIQYYIA 147 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~a~~~a~ 147 (322)
..=.++|-|.||.++..++.
T Consensus 27 ~~d~i~GtSaGai~aa~~a~ 46 (194)
T cd07207 27 LKKRVAGTSAGAITAALLAL 46 (194)
T ss_pred CcceEEEECHHHHHHHHHHc
Confidence 55689999999999999984
No 287
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=47.50 E-value=1.5e+02 Score=23.94 Aligned_cols=75 Identities=15% Similarity=0.182 Sum_probs=46.7
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEE-EEe
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLPPVL-LGH 135 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~l-vG~ 135 (322)
.+.+|++--|..++...|. ..++.+...|-.=+.+-.||. +..+ .|.....--.....+++..+-+|.+ ..|
T Consensus 133 ~gkPV~lk~G~~~s~~e~~-~A~e~i~~~Gn~~i~L~~rG~--~t~~----~Y~~~~vdl~~i~~lk~~~~~pV~~D~sH 205 (266)
T PRK13398 133 TKKPILLKRGMSATLEEWL-YAAEYIMSEGNENVVLCERGI--RTFE----TYTRNTLDLAAVAVIKELSHLPIIVDPSH 205 (266)
T ss_pred CCCcEEEeCCCCCCHHHHH-HHHHHHHhcCCCeEEEEECCC--CCCC----CCCHHHHHHHHHHHHHhccCCCEEEeCCC
Confidence 5778999999999999997 678888877764444455553 1111 2332222222334444344567777 699
Q ss_pred chh
Q 020741 136 SFG 138 (322)
Q Consensus 136 S~G 138 (322)
|.|
T Consensus 206 s~G 208 (266)
T PRK13398 206 ATG 208 (266)
T ss_pred ccc
Confidence 998
No 288
>COG3933 Transcriptional antiterminator [Transcription]
Probab=47.13 E-value=1.1e+02 Score=26.56 Aligned_cols=75 Identities=15% Similarity=0.091 Sum_probs=53.9
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEe
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LPPVLLGH 135 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~ 135 (322)
.-.+||+.||....+.. . ..+..|.+. --+.++|.| ...++.+..+.+.+.++ ..+ .+=+++=.
T Consensus 108 ~v~vIiiAHG~sTASSm-a-evanrLL~~-~~~~aiDMP-----------Ldvsp~~vle~l~e~~k-~~~~~~GlllLV 172 (470)
T COG3933 108 RVKVIIIAHGYSTASSM-A-EVANRLLGE-EIFIAIDMP-----------LDVSPSDVLEKLKEYLK-ERDYRSGLLLLV 172 (470)
T ss_pred ceeEEEEecCcchHHHH-H-HHHHHHhhc-cceeeecCC-----------CcCCHHHHHHHHHHHHH-hcCccCceEEEE
Confidence 44679999998654443 3 467777666 578999997 25688899999999999 444 55455556
Q ss_pred chhHHHHHHHH
Q 020741 136 SFGGLIIQYYI 146 (322)
Q Consensus 136 S~Gg~~a~~~a 146 (322)
.||...++.-.
T Consensus 173 DMGSL~~f~~~ 183 (470)
T COG3933 173 DMGSLTSFGSI 183 (470)
T ss_pred ecchHHHHHHH
Confidence 89988766544
No 289
>TIGR03586 PseI pseudaminic acid synthase.
Probab=46.68 E-value=1.6e+02 Score=24.68 Aligned_cols=79 Identities=15% Similarity=0.164 Sum_probs=49.2
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCc-eEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEe
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGF-DCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLPPVLLGH 135 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~-~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~lvG~ 135 (322)
.+.+|++--|+ .+...|. ..++.+.+.|. .++.... .|..+......++. ....+++..+-+|.+..|
T Consensus 133 ~gkPvilstG~-~t~~Ei~-~Av~~i~~~g~~~i~LlhC----~s~YP~~~~~~nL~-----~i~~lk~~f~~pVG~SDH 201 (327)
T TIGR03586 133 TGKPIIMSTGI-ATLEEIQ-EAVEACREAGCKDLVLLKC----TSSYPAPLEDANLR-----TIPDLAERFNVPVGLSDH 201 (327)
T ss_pred cCCcEEEECCC-CCHHHHH-HHHHHHHHCCCCcEEEEec----CCCCCCCcccCCHH-----HHHHHHHHhCCCEEeeCC
Confidence 57789999998 5788886 67888887776 4555542 33333331122222 223444355678878999
Q ss_pred chhHHHHHHHH
Q 020741 136 SFGGLIIQYYI 146 (322)
Q Consensus 136 S~Gg~~a~~~a 146 (322)
+.|-.+++.+.
T Consensus 202 t~G~~~~~aAv 212 (327)
T TIGR03586 202 TLGILAPVAAV 212 (327)
T ss_pred CCchHHHHHHH
Confidence 99965555544
No 290
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=46.38 E-value=27 Score=28.75 Aligned_cols=17 Identities=18% Similarity=0.167 Sum_probs=15.1
Q ss_pred EEEEechhHHHHHHHHH
Q 020741 131 VLLGHSFGGLIIQYYIA 147 (322)
Q Consensus 131 ~lvG~S~Gg~~a~~~a~ 147 (322)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 48899999999999884
No 291
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=46.24 E-value=38 Score=27.30 Aligned_cols=30 Identities=13% Similarity=0.234 Sum_probs=21.7
Q ss_pred HHHHHHHhCC-CCcEEEEechhHHHHHHHHHH
Q 020741 118 VADFIQKNLS-LPPVLLGHSFGGLIIQYYIAR 148 (322)
Q Consensus 118 l~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~ 148 (322)
+.+.++ ..+ ..=.+.|.|+|+.++..+|..
T Consensus 28 VL~aLe-E~gi~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 28 ILQALE-EAGIPIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHH-HcCCCccEEEEECHHHHHHHHHHcC
Confidence 344444 345 444799999999999999953
No 292
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=45.94 E-value=31 Score=31.01 Aligned_cols=29 Identities=17% Similarity=0.245 Sum_probs=22.7
Q ss_pred HHHHHHhCC-CCcEEEEechhHHHHHHHHH
Q 020741 119 ADFIQKNLS-LPPVLLGHSFGGLIIQYYIA 147 (322)
Q Consensus 119 ~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~ 147 (322)
.+++.+..+ +|-.++|||+|=..|+..|.
T Consensus 255 a~ll~~~~GI~Pdav~GHSlGE~aAa~aAG 284 (538)
T TIGR02816 255 TQLLCDEFAIKPDFALGYSKGEASMWASLG 284 (538)
T ss_pred HHHHHHhcCCCCCEEeecCHHHHHHHHHhC
Confidence 344533577 88999999999999988884
No 293
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=45.68 E-value=48 Score=25.45 Aligned_cols=89 Identities=15% Similarity=0.145 Sum_probs=46.8
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCC----C--C---CCCCCHHHHHHH-----HHHHH
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAP----P--G---TVAGSLQTHAGD-----VADFI 122 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~----~--~---~~~~~~~~~~~d-----l~~~l 122 (322)
..+.|+++.-.......+.+.+.+.+.+.|..+..+...-....... . + ...-+...+.+. +.+.|
T Consensus 28 ~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~~GG~~~~~~~~l~~t~~~~~i 107 (210)
T cd03129 28 AGARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLIDTANDPDVVARLLEADGIFVGGGNQLRLLSVLRETPLLDAI 107 (210)
T ss_pred CCCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEeccCCCCCHHHHHHHhhCCEEEEcCCcHHHHHHHHHhCChHHHH
Confidence 45678888776655444444566777777887776554321000000 0 0 000122222222 22222
Q ss_pred HHhCCCCcEEEEechhHHHHHHH
Q 020741 123 QKNLSLPPVLLGHSFGGLIIQYY 145 (322)
Q Consensus 123 ~~~~~~~~~lvG~S~Gg~~a~~~ 145 (322)
.+...+..+++|.|.|+++....
T Consensus 108 ~~~~~~G~v~~G~SAGA~~~~~~ 130 (210)
T cd03129 108 LKRVARGVVIGGTSAGAAVMGET 130 (210)
T ss_pred HHHHHcCCeEEEcCHHHHHhhhc
Confidence 22333568999999999998875
No 294
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=45.23 E-value=34 Score=28.19 Aligned_cols=30 Identities=23% Similarity=0.346 Sum_probs=23.3
Q ss_pred HHHHHHHhCC-CCcEEEEechhHHHHHHHHHH
Q 020741 118 VADFIQKNLS-LPPVLLGHSFGGLIIQYYIAR 148 (322)
Q Consensus 118 l~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~ 148 (322)
+.+.|+ ..+ .+-.+.|-|+|+.++..+|..
T Consensus 29 Vl~aL~-e~gi~~~~iaGtS~GAiva~l~A~g 59 (306)
T COG1752 29 VLKALE-EAGIPIDVIAGTSAGAIVAALYAAG 59 (306)
T ss_pred HHHHHH-HcCCCccEEEecCHHHHHHHHHHcC
Confidence 344455 456 777899999999999999963
No 295
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=45.07 E-value=84 Score=27.70 Aligned_cols=95 Identities=18% Similarity=0.156 Sum_probs=57.0
Q ss_pred EEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEechhHHHH
Q 020741 63 FVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLPPVLLGHSFGGLII 142 (322)
Q Consensus 63 ~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~lvG~S~Gg~~a 142 (322)
|--|+|.+...-....+++-..+||.|+.+|-.|.- .+-..+...+..+++..-++.|+.||.-+=|.=+
T Consensus 443 fekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~----------~~~~~lm~~l~k~~~~~~pd~i~~vgealvg~ds 512 (587)
T KOG0781|consen 443 FEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRM----------HNNAPLMTSLAKLIKVNKPDLILFVGEALVGNDS 512 (587)
T ss_pred HhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccc----------cCChhHHHHHHHHHhcCCCceEEEehhhhhCcHH
Confidence 334454443322222345555679999999988642 2334556777888872233888999998888877
Q ss_pred HHHHHHHhhhhhccccCCCCC-cceEEEe
Q 020741 143 QYYIARIRNEKMLEMETPYPE-IAGAVLV 170 (322)
Q Consensus 143 ~~~a~~~~~~~~~~~~~~~p~-v~~~vl~ 170 (322)
+.-+..+.+.-+. ...|+ |.++++.
T Consensus 513 v~q~~~fn~al~~---~~~~r~id~~~lt 538 (587)
T KOG0781|consen 513 VDQLKKFNRALAD---HSTPRLIDGILLT 538 (587)
T ss_pred HHHHHHHHHHHhc---CCCccccceEEEE
Confidence 7766655443211 12455 6776663
No 296
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=44.98 E-value=33 Score=27.83 Aligned_cols=20 Identities=25% Similarity=0.290 Sum_probs=17.1
Q ss_pred CCcEEEEechhHHHHHHHHH
Q 020741 128 LPPVLLGHSFGGLIIQYYIA 147 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~a~~~a~ 147 (322)
.+-.++|||+|=+.|+.++.
T Consensus 83 ~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 83 KPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred CCCEEeecCHHHHHHHHHhC
Confidence 68899999999988877763
No 297
>PRK02399 hypothetical protein; Provisional
Probab=44.57 E-value=2.1e+02 Score=24.76 Aligned_cols=86 Identities=17% Similarity=0.244 Sum_probs=48.9
Q ss_pred EEEcCCCcch-hhcccchhhHhhhCCceEEEeCCCCCCCCCCCCC---------------------CCCCCHHHHHHHHH
Q 020741 62 VFVHGSYHAA-WCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPG---------------------TVAGSLQTHAGDVA 119 (322)
Q Consensus 62 l~~HG~~~~~-~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~---------------------~~~~~~~~~~~dl~ 119 (322)
|++=|...+. ..+. .+.+.+.++|..|+.+|.-..|......+ .....++.+.+-+.
T Consensus 6 I~iigT~DTK~~E~~-yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~ 84 (406)
T PRK02399 6 IYIAGTLDTKGEELA-YVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAA 84 (406)
T ss_pred EEEEeccCCcHHHHH-HHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHH
Confidence 4444544443 3343 55666777799999999844442211111 00111233444455
Q ss_pred HHHHHhCC----CCcEEEEechhHHHHHHHHHH
Q 020741 120 DFIQKNLS----LPPVLLGHSFGGLIIQYYIAR 148 (322)
Q Consensus 120 ~~l~~~~~----~~~~lvG~S~Gg~~a~~~a~~ 148 (322)
.++.+... .-++-+|-|.|..++....+.
T Consensus 85 ~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~ 117 (406)
T PRK02399 85 AFVRELYERGDVAGVIGLGGSGGTALATPAMRA 117 (406)
T ss_pred HHHHHHHhcCCccEEEEecCcchHHHHHHHHHh
Confidence 55553222 346788999999999999865
No 298
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=41.62 E-value=1.6e+02 Score=24.33 Aligned_cols=74 Identities=15% Similarity=0.162 Sum_probs=44.3
Q ss_pred cEEEEcCCCcchhhcccchhhHhhhCCceEEEeC----CCCCC--CCCCC---------------CCCCCCCHHHHHHHH
Q 020741 60 PLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVS----LLGQG--ESDAP---------------PGTVAGSLQTHAGDV 118 (322)
Q Consensus 60 ~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D----~~G~G--~S~~~---------------~~~~~~~~~~~~~dl 118 (322)
.||++-|-.++..+ .++-.|++++-.+|..| ++|.- ..... .....++..++.++.
T Consensus 5 ~ii~I~GpTasGKS---~LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~~a 81 (300)
T PRK14729 5 KIVFIFGPTAVGKS---NILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYKEA 81 (300)
T ss_pred cEEEEECCCccCHH---HHHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHHHH
Confidence 36777776555443 23445555545788888 44442 21111 014568999999999
Q ss_pred HHHHHHhCC--CCcEEEEec
Q 020741 119 ADFIQKNLS--LPPVLLGHS 136 (322)
Q Consensus 119 ~~~l~~~~~--~~~~lvG~S 136 (322)
...|+.... +..+|+|-|
T Consensus 82 ~~~i~~i~~~gk~PilvGGT 101 (300)
T PRK14729 82 LKIIKELRQQKKIPIFVGGS 101 (300)
T ss_pred HHHHHHHHHCCCCEEEEeCc
Confidence 999985543 344677744
No 299
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=41.09 E-value=51 Score=25.62 Aligned_cols=20 Identities=25% Similarity=0.439 Sum_probs=17.3
Q ss_pred CCcEEEEechhHHHHHHHHH
Q 020741 128 LPPVLLGHSFGGLIIQYYIA 147 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~a~~~a~ 147 (322)
..-.++|-|.|+.++..++.
T Consensus 28 ~~~~i~GtSaGAi~aa~~a~ 47 (221)
T cd07210 28 EPSAISGTSAGALVGGLFAS 47 (221)
T ss_pred CceEEEEeCHHHHHHHHHHc
Confidence 45579999999999999984
No 300
>COG0400 Predicted esterase [General function prediction only]
Probab=40.99 E-value=1.1e+02 Score=23.67 Aligned_cols=41 Identities=20% Similarity=0.259 Sum_probs=29.1
Q ss_pred CCCCCcEEEEcCCCcc--hhhcccchhhHhhhCCceEEEeCCC
Q 020741 55 NEKRPPLVFVHGSYHA--AWCWAEHWLPFFADSGFDCYAVSLL 95 (322)
Q Consensus 55 ~~~~~~vl~~HG~~~~--~~~~~~~~~~~l~~~g~~v~~~D~~ 95 (322)
...+.+|+++||--.. .......+.+.|.+.|..|..-+..
T Consensus 143 ~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~ 185 (207)
T COG0400 143 DLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE 185 (207)
T ss_pred ccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec
Confidence 3577899999997433 1112235778888899999888886
No 301
>PRK06490 glutamine amidotransferase; Provisional
Probab=40.69 E-value=1.8e+02 Score=22.97 Aligned_cols=85 Identities=16% Similarity=0.194 Sum_probs=46.0
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCC--CC--C--------CCCCCHHHHHHHHHHHHHH
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDA--PP--G--------TVAGSLQTHAGDVADFIQK 124 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~--~~--~--------~~~~~~~~~~~dl~~~l~~ 124 (322)
....+|+.|--..... .+.+.|.+.|+.+-.++.. .|.... .. + ...++...+...+.++|++
T Consensus 7 ~~~vlvi~h~~~~~~g----~l~~~l~~~g~~~~v~~~~-~~~~~p~~l~~~dgvii~Ggp~~~~d~~~wi~~~~~~i~~ 81 (239)
T PRK06490 7 KRPVLIVLHQERSTPG----RVGQLLQERGYPLDIRRPR-LGDPLPDTLEDHAGAVIFGGPMSANDPDDFIRREIDWISV 81 (239)
T ss_pred CceEEEEecCCCCCCh----HHHHHHHHCCCceEEEecc-CCCCCCCcccccCEEEEECCCCCCCCCchHHHHHHHHHHH
Confidence 4456666676543333 3455666666665554321 111000 00 0 1122333456666777774
Q ss_pred hCCCCcEEEEechhHHHHHHHH
Q 020741 125 NLSLPPVLLGHSFGGLIIQYYI 146 (322)
Q Consensus 125 ~~~~~~~lvG~S~Gg~~a~~~a 146 (322)
....++=++|.|+|..+...+.
T Consensus 82 ~~~~~~PvLGIC~G~Qlla~al 103 (239)
T PRK06490 82 PLKENKPFLGICLGAQMLARHL 103 (239)
T ss_pred HHHCCCCEEEECHhHHHHHHHc
Confidence 4445567999999999877775
No 302
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=40.09 E-value=44 Score=26.96 Aligned_cols=77 Identities=13% Similarity=0.151 Sum_probs=38.4
Q ss_pred cEEEEcCCCcchhhc-ccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEech
Q 020741 60 PLVFVHGSYHAAWCW-AEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLPPVLLGHSF 137 (322)
Q Consensus 60 ~vl~~HG~~~~~~~~-~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~lvG~S~ 137 (322)
++|++-|++++.... ...+.+.|.+.++.|+.++--..+....... ........-..+...+++.+.+..+++--|.
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~~~~~~y~-~~~~Ek~~R~~l~s~v~r~ls~~~iVI~Dd~ 79 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLGIDRNDYA-DSKKEKEARGSLKSAVERALSKDTIVILDDN 79 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH-TTSSS---GGGHHHHHHHHHHHHHHHHTT-SEEEE-S-
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccccchhhhh-chhhhHHHHHHHHHHHHHhhccCeEEEEeCC
Confidence 578889997765543 3456777777889998887544442211111 1234455556677777766773334443343
No 303
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=39.95 E-value=42 Score=29.50 Aligned_cols=57 Identities=18% Similarity=0.067 Sum_probs=34.6
Q ss_pred ccEEEEeeCCCCccChhhHHHHhhhc-------C-ceeEEecCCcccceeccchhhhHHHHHHHHhh
Q 020741 261 IKVLVLGAKDDFIVDAQGLSETGSFY-------G-VLPVCVEGVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 261 ~Pvl~i~g~~D~~~~~~~~~~~~~~~-------~-~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
.+++...|-.|..++.-......+.+ + ..+.+++ +||++..++| +.....+..|+.-
T Consensus 426 Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y~-aGHMvp~d~P-~~~~~~~~~~~~~ 490 (498)
T COG2939 426 LKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIYE-AGHMVPYDRP-ESSLEMVNLWING 490 (498)
T ss_pred ceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEec-CcceeecCCh-HHHHHHHHHHHhh
Confidence 34455555555555543332222222 1 3444555 6999999999 8888888888753
No 304
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=38.79 E-value=31 Score=27.53 Aligned_cols=65 Identities=23% Similarity=0.242 Sum_probs=35.5
Q ss_pred cccchhhHhhhCCceEEEeCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--CCcEEEEechhHHHH
Q 020741 74 WAEHWLPFFADSGFDCYAVSLLG-QGESDAPPGTVAGSLQTHAGDVADFIQKNLS--LPPVLLGHSFGGLII 142 (322)
Q Consensus 74 ~~~~~~~~l~~~g~~v~~~D~~G-~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~--~~~~lvG~S~Gg~~a 142 (322)
|.+..+..+++.|-.++++.+-- .|.+..... ..++++.++.+.++.+.... ..++++.| ||-++
T Consensus 158 f~~e~A~~M~~AGaDiiv~H~GlT~gG~~Ga~~--~~sl~~a~~~~~~i~~aa~~v~~dii~l~h--GGPI~ 225 (268)
T PF09370_consen 158 FNEEQARAMAEAGADIIVAHMGLTTGGSIGAKT--ALSLEEAAERIQEIFDAARAVNPDIIVLCH--GGPIA 225 (268)
T ss_dssp -SHHHHHHHHHHT-SEEEEE-SS------------S--HHHHHHHHHHHHHHHHCC-TT-EEEEE--CTTB-
T ss_pred cCHHHHHHHHHcCCCEEEecCCccCCCCcCccc--cCCHHHHHHHHHHHHHHHHHhCCCeEEEEe--CCCCC
Confidence 33345677888899999988632 233333333 46888888888887775444 66777777 77765
No 305
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=38.63 E-value=62 Score=27.90 Aligned_cols=61 Identities=13% Similarity=0.182 Sum_probs=34.9
Q ss_pred CccccEEEEeeCCCCccChhhHHHHhhhc---C--ceeEEecCCcccc---eeccchhhhHHHHHHHHhhh
Q 020741 258 KSSIKVLVLGAKDDFIVDAQGLSETGSFY---G--VLPVCVEGVAHDM---MLDCSWEKGASVILSWLDGL 320 (322)
Q Consensus 258 ~~~~Pvl~i~g~~D~~~~~~~~~~~~~~~---~--~~~~~~~~~gH~~---~~~~~~~~~~~~i~~fl~~~ 320 (322)
.-..|++++.|.-|.+-+ +....+.+.+ + .-.+.+||.|+.. ..++. +.+.+.|.+||...
T Consensus 187 ~~p~P~VIv~gGlDs~qe-D~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~-~~l~~aVLd~L~~~ 255 (411)
T PF06500_consen 187 EKPYPTVIVCGGLDSLQE-DLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDS-SRLHQAVLDYLASR 255 (411)
T ss_dssp SS-EEEEEEE--TTS-GG-GGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-C-CHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCcchhHH-HHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCH-HHHHHHHHHHHhcC
Confidence 456799999999998744 3333333322 3 4445578888753 33444 78889999999764
No 306
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=38.29 E-value=53 Score=17.99 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=25.4
Q ss_pred hCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 020741 84 DSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKN 125 (322)
Q Consensus 84 ~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~ 125 (322)
+.+|.+.++|+||.-. ...+.++..+.+.+.+..+
T Consensus 11 ~~~y~~~~pdlpg~~t-------~G~t~eea~~~~~eal~~~ 45 (48)
T PF03681_consen 11 DGGYVAYFPDLPGCFT-------QGDTLEEALENAKEALELW 45 (48)
T ss_dssp SSSEEEEETTCCTCEE-------EESSHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCccChhh-------cCCCHHHHHHHHHHHHHHH
Confidence 4579999999997631 1357888888888777643
No 307
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=37.79 E-value=28 Score=27.89 Aligned_cols=14 Identities=29% Similarity=0.463 Sum_probs=11.9
Q ss_pred CCcEEEEechhHHH
Q 020741 128 LPPVLLGHSFGGLI 141 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~ 141 (322)
..|+++|||+|..=
T Consensus 235 ~~I~i~GhSl~~~D 248 (270)
T PF14253_consen 235 DEIIIYGHSLGEVD 248 (270)
T ss_pred CEEEEEeCCCchhh
Confidence 77999999999753
No 308
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=37.48 E-value=65 Score=23.77 Aligned_cols=20 Identities=25% Similarity=0.353 Sum_probs=17.0
Q ss_pred CCcEEEEechhHHHHHHHHH
Q 020741 128 LPPVLLGHSFGGLIIQYYIA 147 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~a~~~a~ 147 (322)
..-.+.|-|.|+.++..++.
T Consensus 28 ~~d~i~GtSaGal~a~~~a~ 47 (175)
T cd07205 28 PIDIVSGTSAGAIVGALYAA 47 (175)
T ss_pred CeeEEEEECHHHHHHHHHHc
Confidence 44479999999999999983
No 309
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=37.25 E-value=67 Score=24.82 Aligned_cols=20 Identities=20% Similarity=0.315 Sum_probs=17.5
Q ss_pred CCcEEEEechhHHHHHHHHH
Q 020741 128 LPPVLLGHSFGGLIIQYYIA 147 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~a~~~a~ 147 (322)
..-.+.|.|.|+.++..++.
T Consensus 26 ~~d~i~GtS~GAl~aa~~a~ 45 (215)
T cd07209 26 EPDIISGTSIGAINGALIAG 45 (215)
T ss_pred CCCEEEEECHHHHHHHHHHc
Confidence 45589999999999999994
No 310
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=36.60 E-value=67 Score=24.89 Aligned_cols=37 Identities=22% Similarity=0.344 Sum_probs=26.5
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCC
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLL 95 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~ 95 (322)
+.+.+|++-|.....--+ .++..|.+.||.|++--.+
T Consensus 5 ~~~k~VlItgcs~GGIG~--ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGY--ALAKEFARNGYLVYATARR 41 (289)
T ss_pred cCCCeEEEeecCCcchhH--HHHHHHHhCCeEEEEEccc
Confidence 556777777754433333 5789999999999997654
No 311
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=36.43 E-value=41 Score=24.80 Aligned_cols=34 Identities=15% Similarity=0.166 Sum_probs=25.2
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCceEEE
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYA 91 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~ 91 (322)
..+.|+++-|-|.+...=. ..++.|..+|+.|.+
T Consensus 24 ~~~~v~il~G~GnNGgDgl-~~AR~L~~~G~~V~v 57 (169)
T PF03853_consen 24 KGPRVLILCGPGNNGGDGL-VAARHLANRGYNVTV 57 (169)
T ss_dssp TT-EEEEEE-SSHHHHHHH-HHHHHHHHTTCEEEE
T ss_pred CCCeEEEEECCCCChHHHH-HHHHHHHHCCCeEEE
Confidence 6677888888876665544 578999999999888
No 312
>PHA02114 hypothetical protein
Probab=35.79 E-value=34 Score=22.28 Aligned_cols=34 Identities=15% Similarity=0.248 Sum_probs=26.7
Q ss_pred CcEEEEcCCCcchhhcccchhhHhhhCCceEEEeC
Q 020741 59 PPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVS 93 (322)
Q Consensus 59 ~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D 93 (322)
.+||+=--+..+...|. .++..|.+.||.|++-.
T Consensus 83 gtivldvn~amsr~pwi-~v~s~le~~g~~vvatq 116 (127)
T PHA02114 83 GTIVLDVNYAMSRAPWI-KVISRLEEAGFNVVATQ 116 (127)
T ss_pred CeEEEEehhhhccCcHH-HHHHHHHhcCceeeehh
Confidence 45666666778888887 78888988999998754
No 313
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=35.70 E-value=71 Score=23.63 Aligned_cols=20 Identities=30% Similarity=0.453 Sum_probs=17.0
Q ss_pred CCcEEEEechhHHHHHHHHH
Q 020741 128 LPPVLLGHSFGGLIIQYYIA 147 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~a~~~a~ 147 (322)
..=.+.|-|.|+.++..++.
T Consensus 28 ~~d~i~GtSaGAi~aa~~a~ 47 (175)
T cd07228 28 EIDIIAGSSIGALVGALYAA 47 (175)
T ss_pred CeeEEEEeCHHHHHHHHHHc
Confidence 44579999999999999983
No 314
>PRK15180 Vi polysaccharide biosynthesis protein TviD; Provisional
Probab=35.67 E-value=93 Score=27.41 Aligned_cols=76 Identities=17% Similarity=0.203 Sum_probs=49.7
Q ss_pred cEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCC-----------------------CCCCCHHHHHH
Q 020741 60 PLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPG-----------------------TVAGSLQTHAG 116 (322)
Q Consensus 60 ~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~-----------------------~~~~~~~~~~~ 116 (322)
-++.+-|+.-....-..++.+.|+..+-+.+.+++++-|.-..... ....+-++.-+
T Consensus 98 Kkl~~dG~~LQ~NyVvrHF~Effsd~~R~~mfWSLa~Ad~raqRlAYL~ddP~FAgLs~D~r~lLs~ivvrq~teaEIEe 177 (831)
T PRK15180 98 KKIMAYGFCLQINYLTRHFYEFFSQTERACMYWSLATQGNRHKLLAYLKDDPCFAGMSEDDRALLSNINVEQMDEHAIEQ 177 (831)
T ss_pred eeEEeccchhhHHHHHHHHHHHhhhcchhhhhhhcccccchhHHHHHhhcChhhhhhhHhHHHHHHhhHhhcccHHHHHH
Confidence 4678888765544333467888888888888889988876544111 11224444555
Q ss_pred HHHHHHHHhCC-CCcEEEEec
Q 020741 117 DVADFIQKNLS-LPPVLLGHS 136 (322)
Q Consensus 117 dl~~~l~~~~~-~~~~lvG~S 136 (322)
|+.+++. .+| ++|.+|-|.
T Consensus 178 DmmeIVq-LLGk~rVvfVTHV 197 (831)
T PRK15180 178 DMMEIVQ-LLGRDRVMFMTHV 197 (831)
T ss_pred HHHHHHH-HhCCCcEEEEEee
Confidence 6666666 678 788999886
No 315
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=35.23 E-value=47 Score=22.77 Aligned_cols=14 Identities=14% Similarity=0.223 Sum_probs=11.1
Q ss_pred hhHhhhCCceEEEe
Q 020741 79 LPFFADSGFDCYAV 92 (322)
Q Consensus 79 ~~~l~~~g~~v~~~ 92 (322)
...|.+.|++|+.+
T Consensus 100 ~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 100 NSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHCcCEEEEE
Confidence 45787889999876
No 316
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=35.07 E-value=39 Score=27.33 Aligned_cols=85 Identities=18% Similarity=0.185 Sum_probs=47.5
Q ss_pred cEEEEcCCCcchhhcccchhhHhhhCCc-------eEEEeCCCCCCCCCCCCCCCCCCHHHHHH--------HHHHHHHH
Q 020741 60 PLVFVHGSYHAAWCWAEHWLPFFADSGF-------DCYAVSLLGQGESDAPPGTVAGSLQTHAG--------DVADFIQK 124 (322)
Q Consensus 60 ~vl~~HG~~~~~~~~~~~~~~~l~~~g~-------~v~~~D~~G~G~S~~~~~~~~~~~~~~~~--------dl~~~l~~ 124 (322)
.-|++.|.|...-.-.+.+...+.+.|. +++.+|..|-=..+.... ...-..+++ ++.+.++.
T Consensus 26 ~~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l--~~~~~~~a~~~~~~~~~~L~e~i~~ 103 (279)
T cd05312 26 QRILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDL--TPFKKPFARKDEEKEGKSLLEVVKA 103 (279)
T ss_pred cEEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcc--hHHHHHHHhhcCcccCCCHHHHHHh
Confidence 4456666654433222345566655676 899999998543332211 011112222 34444441
Q ss_pred hCCCCcEEEEech-hHHHHHHHHHH
Q 020741 125 NLSLPPVLLGHSF-GGLIIQYYIAR 148 (322)
Q Consensus 125 ~~~~~~~lvG~S~-Gg~~a~~~a~~ 148 (322)
. ++-+|+|-|- ||.+.-...+.
T Consensus 104 v--~ptvlIG~S~~~g~ft~evv~~ 126 (279)
T cd05312 104 V--KPTVLIGLSGVGGAFTEEVVRA 126 (279)
T ss_pred c--CCCEEEEeCCCCCCCCHHHHHH
Confidence 1 6778999994 78777776655
No 317
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=34.52 E-value=2.7e+02 Score=24.43 Aligned_cols=56 Identities=9% Similarity=0.051 Sum_probs=36.6
Q ss_pred hhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHH
Q 020741 83 ADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARI 149 (322)
Q Consensus 83 ~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~ 149 (322)
...+|.++.+|-+|.- ..-..+.+.+..+.+ ... ..+++|--++-|.-+...+..+
T Consensus 179 ~~~~~DvViIDTaGr~----------~~d~~lm~El~~i~~-~~~p~e~lLVlda~~Gq~a~~~a~~F 235 (429)
T TIGR01425 179 KKENFDIIIVDTSGRH----------KQEDSLFEEMLQVAE-AIQPDNIIFVMDGSIGQAAEAQAKAF 235 (429)
T ss_pred HhCCCCEEEEECCCCC----------cchHHHHHHHHHHhh-hcCCcEEEEEeccccChhHHHHHHHH
Confidence 3357999999999741 123345566666665 444 6677777777777666666554
No 318
>PF01221 Dynein_light: Dynein light chain type 1 ; InterPro: IPR001372 Dynein is a multisubunit microtubule-dependent motor enzyme that acts as the force generating protein of eukaryotic cilia and flagella. The cytoplasmic isoform of dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein is composed of a number of ATP-binding large subunits (see IPR004273 from INTERPRO), intermediate size subunits and small subunits. Among the small subunits, there is a family of highly conserved proteins which make up this family [, ]. Both type 1 (DLC1) and 2 (DLC2) dynein light chains have a similar two-layer alpha-beta core structure consisting of beta-alpha(2)-beta-X-beta(2) [, ].; GO: 0007017 microtubule-based process, 0005875 microtubule associated complex; PDB: 1F95_A 1F96_A 1F3C_A 3P8M_B 2XQQ_C 1RE6_A 1CMI_A 1PWK_A 1PWJ_A 4DS1_C ....
Probab=34.38 E-value=34 Score=22.00 Aligned_cols=32 Identities=19% Similarity=0.227 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHHHhCCCCcE-EEEechhHHH
Q 020741 110 SLQTHAGDVADFIQKNLSLPPV-LLGHSFGGLI 141 (322)
Q Consensus 110 ~~~~~~~dl~~~l~~~~~~~~~-lvG~S~Gg~~ 141 (322)
+..+.++-|.+.+++..|+..+ +||.|+|+.+
T Consensus 34 ~~~eiA~~iK~~lD~~yG~~Wh~IVG~~Fg~~~ 66 (89)
T PF01221_consen 34 DEKEIAEFIKQELDKKYGPTWHCIVGKSFGSSV 66 (89)
T ss_dssp SHHHHHHHHHHHHHHHHSS-EEEEEESEEEEEE
T ss_pred cHHHHHHHHHHHHhcccCCceEEEECCcEEEEE
Confidence 5577888888888877776653 7899998643
No 319
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=34.13 E-value=57 Score=25.17 Aligned_cols=35 Identities=11% Similarity=0.145 Sum_probs=26.4
Q ss_pred cEEEEcCCCcc-hhhcccchhhHhhhCCceEEEeCC
Q 020741 60 PLVFVHGSYHA-AWCWAEHWLPFFADSGFDCYAVSL 94 (322)
Q Consensus 60 ~vl~~HG~~~~-~~~~~~~~~~~l~~~g~~v~~~D~ 94 (322)
++|++-|.+++ ...+...+++.|.+.+++|+...-
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 57888998655 445666788999888888887654
No 320
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=33.77 E-value=3.3e+02 Score=23.91 Aligned_cols=70 Identities=13% Similarity=0.146 Sum_probs=46.1
Q ss_pred HhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEechhHHHHHHHHHHHhhhhhccccC
Q 020741 81 FFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGGLIIQYYIARIRNEKMLEMET 159 (322)
Q Consensus 81 ~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~~~~~~~~ 159 (322)
.+.+.+|.|+.+|-.|. ..--+++.+.+.++-+ .+. ..+.+|--++=|.-|...|..+.+.
T Consensus 177 ~ak~~~~DvvIvDTAGR----------l~ide~Lm~El~~Ik~-~~~P~E~llVvDam~GQdA~~~A~aF~e~------- 238 (451)
T COG0541 177 KAKEEGYDVVIVDTAGR----------LHIDEELMDELKEIKE-VINPDETLLVVDAMIGQDAVNTAKAFNEA------- 238 (451)
T ss_pred HHHHcCCCEEEEeCCCc----------ccccHHHHHHHHHHHh-hcCCCeEEEEEecccchHHHHHHHHHhhh-------
Confidence 33344566666665542 1233456666766666 555 8899999999999999999875432
Q ss_pred CCCCcceEEEe
Q 020741 160 PYPEIAGAVLV 170 (322)
Q Consensus 160 ~~p~v~~~vl~ 170 (322)
-.+.++|+-
T Consensus 239 --l~itGvIlT 247 (451)
T COG0541 239 --LGITGVILT 247 (451)
T ss_pred --cCCceEEEE
Confidence 237777774
No 321
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=33.65 E-value=1.2e+02 Score=27.60 Aligned_cols=38 Identities=16% Similarity=0.205 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHhCC--CCcEEEEe------chhHHHHHHHHHH
Q 020741 111 LQTHAGDVADFIQKNLS--LPPVLLGH------SFGGLIIQYYIAR 148 (322)
Q Consensus 111 ~~~~~~dl~~~l~~~~~--~~~~lvG~------S~Gg~~a~~~a~~ 148 (322)
...-+.++-..|...+. ++|+++|| +.|+.+++...+.
T Consensus 319 TRvRaRvis~al~d~i~e~d~VfImGHk~pDmDalGsAig~~~~A~ 364 (655)
T COG3887 319 TRVRARVISTALSDIIKESDNVFIMGHKFPDMDALGSAIGMQKFAS 364 (655)
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEccCCCChHHHHHHHHHHHHHH
Confidence 33444555555543433 89999999 7899999987765
No 322
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=33.50 E-value=2.2e+02 Score=21.70 Aligned_cols=60 Identities=12% Similarity=0.028 Sum_probs=39.5
Q ss_pred hhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEechhHHHHHHHHHH
Q 020741 79 LPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLPPVLLGHSFGGLIIQYYIAR 148 (322)
Q Consensus 79 ~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~ 148 (322)
.+.+.++++.++.+|-+|.. ..-.+..+++..+++...+..++++=-+..+.-.+..+..
T Consensus 76 l~~~~~~~~D~vlIDT~Gr~----------~~d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~ 135 (196)
T PF00448_consen 76 LEKFRKKGYDLVLIDTAGRS----------PRDEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALA 135 (196)
T ss_dssp HHHHHHTTSSEEEEEE-SSS----------STHHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHH
T ss_pred HHHHhhcCCCEEEEecCCcc----------hhhHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHH
Confidence 34455577999999999762 3455677888888884434667766666666666665544
No 323
>PLN02840 tRNA dimethylallyltransferase
Probab=33.27 E-value=2.1e+02 Score=24.96 Aligned_cols=77 Identities=17% Similarity=0.147 Sum_probs=42.9
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhC-CceEEEeCC----CCCCC-CCCCC----------------CCCCCCHHHH
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADS-GFDCYAVSL----LGQGE-SDAPP----------------GTVAGSLQTH 114 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~D~----~G~G~-S~~~~----------------~~~~~~~~~~ 114 (322)
....+|++-|-.++... .++..|++. +..++..|- +|.-- |..+. ....|+..++
T Consensus 19 ~~~~vi~I~GptgsGKT---tla~~La~~~~~~iis~Ds~qvYr~~~IgTaKpt~eE~~~V~Hhlidil~p~e~ySv~~F 95 (421)
T PLN02840 19 KKEKVIVISGPTGAGKS---RLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLSERKEVPHHLIDILHPSDDYSVGAF 95 (421)
T ss_pred cCCeEEEEECCCCCCHH---HHHHHHHHHCCCCeEeccccceecceeEEcCCCCHHHHcCCCeEeEeecCCCCceeHHHH
Confidence 34456777776544432 234455443 445777774 33321 11111 1346889999
Q ss_pred HHHHHHHHHHhCC--CCcEEEEec
Q 020741 115 AGDVADFIQKNLS--LPPVLLGHS 136 (322)
Q Consensus 115 ~~dl~~~l~~~~~--~~~~lvG~S 136 (322)
.++....|+.... +..+|+|-+
T Consensus 96 ~~~A~~~I~~i~~rgkiPIvVGGT 119 (421)
T PLN02840 96 FDDARRATQDILNRGRVPIVAGGT 119 (421)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCc
Confidence 9999999986554 334666644
No 324
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=32.66 E-value=50 Score=26.69 Aligned_cols=31 Identities=26% Similarity=0.401 Sum_probs=24.3
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCC
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLL 95 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~ 95 (322)
.-|.|+|.-|.+ ...+.|+..||.|+..|+-
T Consensus 251 ~vPmi~fakG~g--------~~Le~l~~tG~DVvgLDWT 281 (359)
T KOG2872|consen 251 PVPMILFAKGSG--------GALEELAQTGYDVVGLDWT 281 (359)
T ss_pred CCceEEEEcCcc--------hHHHHHHhcCCcEEeeccc
Confidence 447889988853 2467888899999999973
No 325
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=32.05 E-value=2.2e+02 Score=21.47 Aligned_cols=85 Identities=14% Similarity=0.158 Sum_probs=46.9
Q ss_pred EEEEcCCCcc---hhhcccchhhHhhhCCceEEEeCCCCCC-CCCCCCC---------CCCCCHHHHHHHHHHHHHHhC-
Q 020741 61 LVFVHGSYHA---AWCWAEHWLPFFADSGFDCYAVSLLGQG-ESDAPPG---------TVAGSLQTHAGDVADFIQKNL- 126 (322)
Q Consensus 61 vl~~HG~~~~---~~~~~~~~~~~l~~~g~~v~~~D~~G~G-~S~~~~~---------~~~~~~~~~~~dl~~~l~~~~- 126 (322)
||=..|.+.. -+.+.+.+...+.++|+.|.++-..... .....-. ..........-|+..++. .+
T Consensus 6 IiGtrGIPa~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~~~~y~gv~l~~i~~~~~g~~~si~yd~~sl~~-al~ 84 (185)
T PF09314_consen 6 IIGTRGIPARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYKEFEYNGVRLVYIPAPKNGSAESIIYDFLSLLH-ALR 84 (185)
T ss_pred EEeCCCCCcccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCCCcccCCeEEEEeCCCCCCchHHHHHHHHHHHH-HHH
Confidence 4444555433 3344456667777778877666554322 2211100 222346677777776666 33
Q ss_pred -------CC-CcEEEEechhHHHHHHHH
Q 020741 127 -------SL-PPVLLGHSFGGLIIQYYI 146 (322)
Q Consensus 127 -------~~-~~~lvG~S~Gg~~a~~~a 146 (322)
.. =++++|.+.|+.+...+-
T Consensus 85 ~~~~~~~~~~ii~ilg~~~g~~~~~~~r 112 (185)
T PF09314_consen 85 FIKQDKIKYDIILILGYGIGPFFLPFLR 112 (185)
T ss_pred HHhhccccCCEEEEEcCCccHHHHHHHH
Confidence 11 256889998888776554
No 326
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=31.99 E-value=62 Score=26.78 Aligned_cols=20 Identities=25% Similarity=0.321 Sum_probs=17.6
Q ss_pred CCcEEEEechhHHHHHHHHH
Q 020741 128 LPPVLLGHSFGGLIIQYYIA 147 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~a~~~a~ 147 (322)
.+.++.|||+|=+.|+..+.
T Consensus 85 ~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 85 KPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCceeecccHhHHHHHHHcc
Confidence 77899999999999888874
No 327
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=31.84 E-value=70 Score=25.52 Aligned_cols=18 Identities=28% Similarity=0.377 Sum_probs=15.7
Q ss_pred EEEEechhHHHHHHHHHH
Q 020741 131 VLLGHSFGGLIIQYYIAR 148 (322)
Q Consensus 131 ~lvG~S~Gg~~a~~~a~~ 148 (322)
.+.|-|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 489999999999999843
No 328
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=31.82 E-value=83 Score=24.70 Aligned_cols=20 Identities=25% Similarity=0.218 Sum_probs=17.3
Q ss_pred CcEEEEechhHHHHHHHHHH
Q 020741 129 PPVLLGHSFGGLIIQYYIAR 148 (322)
Q Consensus 129 ~~~lvG~S~Gg~~a~~~a~~ 148 (322)
.-.+.|-|.|+.++..++..
T Consensus 30 ~~~i~G~SAGAl~aa~~asg 49 (233)
T cd07224 30 TTPLAGASAGSLAAACSASG 49 (233)
T ss_pred CCEEEEEcHHHHHHHHHHcC
Confidence 34799999999999999954
No 329
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=31.61 E-value=1.1e+02 Score=27.33 Aligned_cols=71 Identities=13% Similarity=0.015 Sum_probs=45.3
Q ss_pred CCCcEEEEcCCCcchh-hcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHhCC--CCcEE
Q 020741 57 KRPPLVFVHGSYHAAW-CWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGD-VADFIQKNLS--LPPVL 132 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~d-l~~~l~~~~~--~~~~l 132 (322)
+.++||++-|+-++.. .-...+...|..+|++|.++..| +.++...+ +-.+-. .++ +.+.|
T Consensus 38 ~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P--------------~~eE~~~~flwRfw~-~lP~~G~I~I 102 (493)
T TIGR03708 38 GFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRP--------------SDEERERPPMWRFWR-RLPPKGKIGI 102 (493)
T ss_pred CCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCC--------------CHHHhcCcHHHHHHH-hCCCCCeEEE
Confidence 6789999999854432 22235777888899999999887 22333333 334444 565 67777
Q ss_pred EEechhHHHH
Q 020741 133 LGHSFGGLII 142 (322)
Q Consensus 133 vG~S~Gg~~a 142 (322)
+=-|+=+-+.
T Consensus 103 FdRSWY~~vl 112 (493)
T TIGR03708 103 FFGSWYTRPL 112 (493)
T ss_pred EcCcccchhh
Confidence 7666655443
No 330
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=31.57 E-value=53 Score=25.67 Aligned_cols=29 Identities=14% Similarity=0.212 Sum_probs=20.8
Q ss_pred EEEEcCCCcchhhcccchhhHhhhCCceEEEeCCC
Q 020741 61 LVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLL 95 (322)
Q Consensus 61 vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~ 95 (322)
=||+.|-|-+.+ +..|+++||+|+.+|+-
T Consensus 46 rvLvPgCGkg~D------~~~LA~~G~~V~GvDlS 74 (226)
T PRK13256 46 VCLIPMCGCSID------MLFFLSKGVKVIGIELS 74 (226)
T ss_pred eEEEeCCCChHH------HHHHHhCCCcEEEEecC
Confidence 567777554432 44678899999999984
No 331
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=31.39 E-value=3e+02 Score=23.16 Aligned_cols=79 Identities=14% Similarity=0.118 Sum_probs=48.3
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCce---EEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEE
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFD---CYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLPPVLL 133 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~---v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~lv 133 (322)
.+.+||+--|+ .+...|. ..++.+.+.|.. ++.+-.- |..+......++.. ...+++..+-+|.+-
T Consensus 132 ~gkPvilStGm-atl~Ei~-~Av~~i~~~G~~~~~i~llhC~----s~YP~~~~~~nL~~-----I~~Lk~~f~~pVG~S 200 (329)
T TIGR03569 132 FGKPVILSTGM-ATLEEIE-AAVGVLRDAGTPDSNITLLHCT----TEYPAPFEDVNLNA-----MDTLKEAFDLPVGYS 200 (329)
T ss_pred cCCcEEEECCC-CCHHHHH-HHHHHHHHcCCCcCcEEEEEEC----CCCCCCcccCCHHH-----HHHHHHHhCCCEEEC
Confidence 56789999998 5777886 678888877764 4444321 33333322223322 234443556788889
Q ss_pred EechhHHHHHHHH
Q 020741 134 GHSFGGLIIQYYI 146 (322)
Q Consensus 134 G~S~Gg~~a~~~a 146 (322)
+|+.|-.++..+.
T Consensus 201 dHt~G~~~~~aAv 213 (329)
T TIGR03569 201 DHTLGIEAPIAAV 213 (329)
T ss_pred CCCccHHHHHHHH
Confidence 9999976655444
No 332
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=31.34 E-value=21 Score=27.86 Aligned_cols=73 Identities=12% Similarity=0.084 Sum_probs=40.3
Q ss_pred CCCcEEEEcCCCcchhh-cccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHhCC--CCcEE
Q 020741 57 KRPPLVFVHGSYHAAWC-WAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGD-VADFIQKNLS--LPPVL 132 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~-~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~d-l~~~l~~~~~--~~~~l 132 (322)
+.|+||++.|+.++... -...+...|-.+|++|.++.-| +-++...+ +-.+-. .++ +.+.+
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p--------------t~eE~~~p~lwRfw~-~lP~~G~I~i 93 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP--------------TDEELRRPFLWRFWR-ALPARGQIGI 93 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS----------------HHHHTS-TTHHHHT-TS--TT-EEE
T ss_pred CCcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC--------------ChhHcCCCcHHHHHH-hCCCCCEEEE
Confidence 34689999999655443 2234566676789999999876 23333322 334444 565 77888
Q ss_pred EEechhHHHHHH
Q 020741 133 LGHSFGGLIIQY 144 (322)
Q Consensus 133 vG~S~Gg~~a~~ 144 (322)
+=-|+=.-+...
T Consensus 94 f~rSWY~~~l~~ 105 (228)
T PF03976_consen 94 FDRSWYEDVLVE 105 (228)
T ss_dssp EES-GGGGGTHH
T ss_pred EecchhhHHHHH
Confidence 877775544433
No 333
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=31.33 E-value=55 Score=25.41 Aligned_cols=31 Identities=26% Similarity=0.287 Sum_probs=22.2
Q ss_pred CcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCC
Q 020741 59 PPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLL 95 (322)
Q Consensus 59 ~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~ 95 (322)
+.=||++|-|.+.. +..|+++||+|+.+|+-
T Consensus 38 ~~rvLvPgCG~g~D------~~~La~~G~~VvGvDls 68 (218)
T PF05724_consen 38 GGRVLVPGCGKGYD------MLWLAEQGHDVVGVDLS 68 (218)
T ss_dssp SEEEEETTTTTSCH------HHHHHHTTEEEEEEES-
T ss_pred CCeEEEeCCCChHH------HHHHHHCCCeEEEEecC
Confidence 34588888665432 45788899999999983
No 334
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=31.29 E-value=55 Score=28.88 Aligned_cols=54 Identities=17% Similarity=0.116 Sum_probs=33.9
Q ss_pred HhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcE-----EEEechhHHHHHHHHH
Q 020741 81 FFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLPPV-----LLGHSFGGLIIQYYIA 147 (322)
Q Consensus 81 ~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~-----lvG~S~Gg~~a~~~a~ 147 (322)
....+|.+++.+|--|. ---..-.+..-|++.-++||+ +.|.|.||++|..+..
T Consensus 411 ~vkg~G~rILSiDGGGt-------------rG~~~lqiL~kieklsgKpIheLFD~ICGvSTG~ilA~~Lg~ 469 (763)
T KOG4231|consen 411 QVKGQGLRILSIDGGGT-------------RGLATLQILKKIEKLSGKPIHELFDLICGVSTGGILAIALGV 469 (763)
T ss_pred ccCCCceEEEEecCCCc-------------cchhHHHHHHHHHHhcCCcHHHHHHHHhccCchHHHHHHHHh
Confidence 34557889999985432 111122333344424447764 8899999999998874
No 335
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=31.20 E-value=2.4e+02 Score=24.08 Aligned_cols=74 Identities=12% Similarity=0.152 Sum_probs=44.6
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHhCCCCcEE-EE
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPG-TVAGSLQTHAGDVADFIQKNLSLPPVL-LG 134 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~-~~~~~~~~~~~dl~~~l~~~~~~~~~l-vG 134 (322)
.+.+|++--|...+...|. ..++.+.+.|-.=+++-.||. |..+.. ....++. . ...+++..+-||++ ..
T Consensus 224 ~gkPVilk~G~~~t~~e~~-~Ave~i~~~Gn~~i~L~erg~--s~yp~~~~~~ldl~----~-i~~lk~~~~~PV~~d~~ 295 (360)
T PRK12595 224 VNKPVLLKRGLSATIEEFI-YAAEYIMSQGNGQIILCERGI--RTYEKATRNTLDIS----A-VPILKQETHLPVMVDVT 295 (360)
T ss_pred cCCcEEEeCCCCCCHHHHH-HHHHHHHHCCCCCEEEECCcc--CCCCCCCCCCcCHH----H-HHHHHHHhCCCEEEeCC
Confidence 5778999999989999997 778888877763333333433 433322 1112221 1 12333234567777 79
Q ss_pred echh
Q 020741 135 HSFG 138 (322)
Q Consensus 135 ~S~G 138 (322)
||.|
T Consensus 296 Hs~G 299 (360)
T PRK12595 296 HSTG 299 (360)
T ss_pred CCCc
Confidence 9988
No 336
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=30.64 E-value=77 Score=22.50 Aligned_cols=45 Identities=16% Similarity=0.262 Sum_probs=27.2
Q ss_pred cEEEEcCCC-cchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCC
Q 020741 60 PLVFVHGSY-HAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPP 104 (322)
Q Consensus 60 ~vl~~HG~~-~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~ 104 (322)
++|.+-|.. .......+.++..|.++||+|.++=.-+||......
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~~d~ 46 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFEIDP 46 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTTCST
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcccCC
Confidence 356666663 444444467889999999999977666666654443
No 337
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=30.51 E-value=81 Score=19.73 Aligned_cols=40 Identities=10% Similarity=0.144 Sum_probs=27.0
Q ss_pred CHHHHHHHHHHHHHHh---CC-CCcEEEEechhHHHHHHHHHHH
Q 020741 110 SLQTHAGDVADFIQKN---LS-LPPVLLGHSFGGLIIQYYIARI 149 (322)
Q Consensus 110 ~~~~~~~dl~~~l~~~---~~-~~~~lvG~S~Gg~~a~~~a~~~ 149 (322)
.....+++-.++++.. -+ +++.++|-|.|=.+|.+.+..+
T Consensus 18 GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 18 GCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 4455555556666532 23 6789999999999998888653
No 338
>PRK05665 amidotransferase; Provisional
Probab=30.49 E-value=1.2e+02 Score=24.03 Aligned_cols=38 Identities=16% Similarity=0.227 Sum_probs=27.4
Q ss_pred CCHHHHHHHHHHHHHHhCCCCcEEEEechhHHHHHHHH
Q 020741 109 GSLQTHAGDVADFIQKNLSLPPVLLGHSFGGLIIQYYI 146 (322)
Q Consensus 109 ~~~~~~~~dl~~~l~~~~~~~~~lvG~S~Gg~~a~~~a 146 (322)
+.-..+...+.++|+..+...+-++|.|+|..+...++
T Consensus 71 ~~~~pwi~~l~~~i~~~~~~~~PilGIC~GhQlla~Al 108 (240)
T PRK05665 71 FGTDPWIQTLKTYLLKLYERGDKLLGVCFGHQLLALLL 108 (240)
T ss_pred cccchHHHHHHHHHHHHHhcCCCEEEEeHHHHHHHHHh
Confidence 33456777778888755554556999999998876665
No 339
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=30.39 E-value=75 Score=27.19 Aligned_cols=38 Identities=18% Similarity=0.344 Sum_probs=28.5
Q ss_pred EEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCC
Q 020741 61 LVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESD 101 (322)
Q Consensus 61 vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~ 101 (322)
|||+|...- ..|. .+++.|.++|+.|..+-..+.+...
T Consensus 2 il~~~~~~p--~~~~-~la~~L~~~G~~v~~~~~~~~~~~~ 39 (396)
T cd03818 2 ILFVHQNFP--GQFR-HLAPALAAQGHEVVFLTEPNAAPPP 39 (396)
T ss_pred EEEECCCCc--hhHH-HHHHHHHHCCCEEEEEecCCCCCCC
Confidence 789998643 2355 7899999999999988777665443
No 340
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=30.38 E-value=37 Score=24.76 Aligned_cols=61 Identities=16% Similarity=0.181 Sum_probs=32.2
Q ss_pred eCCCCCCCCCCCCC-CCCCCHHHHHHHH----HHHHHHhC----CCCcEEEEechhHH-----HHHHHHHHHhhh
Q 020741 92 VSLLGQGESDAPPG-TVAGSLQTHAGDV----ADFIQKNL----SLPPVLLGHSFGGL-----IIQYYIARIRNE 152 (322)
Q Consensus 92 ~D~~G~G~S~~~~~-~~~~~~~~~~~dl----~~~l~~~~----~~~~~lvG~S~Gg~-----~a~~~a~~~~~~ 152 (322)
+-+-|||....... ...++..++++-+ ..+-+... +++|.|+|.|++.. .+..++..+.++
T Consensus 59 w~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~~~~~~fa~~f~~~L~~~ 133 (157)
T PF11713_consen 59 WQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADNNKQESFALQFAQALKKQ 133 (157)
T ss_dssp EEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-TTGGGSHHHHHHHHHHHH
T ss_pred EEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCCcccccHHHHHHHHHHhc
Confidence 33457776622111 2246777888777 33333221 27799999999988 455555554443
No 341
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=29.90 E-value=3.3e+02 Score=22.66 Aligned_cols=76 Identities=20% Similarity=0.200 Sum_probs=44.6
Q ss_pred CcEEEEcCCCcchhhcccchhhHhhhC-CceEEEeC----CCCCCC-CCCCC----------------CCCCCCHHHHHH
Q 020741 59 PPLVFVHGSYHAAWCWAEHWLPFFADS-GFDCYAVS----LLGQGE-SDAPP----------------GTVAGSLQTHAG 116 (322)
Q Consensus 59 ~~vl~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~D----~~G~G~-S~~~~----------------~~~~~~~~~~~~ 116 (322)
+.++++-|-.++...- ++=.|+++ |-.||..| ++|..- |..+. ....++..++.+
T Consensus 3 ~~~i~I~GPTAsGKT~---lai~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ysa~~f~~ 79 (308)
T COG0324 3 PKLIVIAGPTASGKTA---LAIALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYSAAEFQR 79 (308)
T ss_pred ccEEEEECCCCcCHHH---HHHHHHHHcCCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCccccccHHHHHH
Confidence 4566666654444332 23344443 56788888 455421 11221 145688899999
Q ss_pred HHHHHHHHhCC--CCcEEEEech
Q 020741 117 DVADFIQKNLS--LPPVLLGHSF 137 (322)
Q Consensus 117 dl~~~l~~~~~--~~~~lvG~S~ 137 (322)
++...|+.... +-.+|||-|+
T Consensus 80 ~a~~~i~~i~~rgk~pIlVGGTg 102 (308)
T COG0324 80 DALAAIDDILARGKLPILVGGTG 102 (308)
T ss_pred HHHHHHHHHHhCCCCcEEEccHH
Confidence 99988886554 4557887553
No 342
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=29.64 E-value=94 Score=22.64 Aligned_cols=44 Identities=11% Similarity=0.045 Sum_probs=29.2
Q ss_pred CCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC-cEEEEechhH
Q 020741 85 SGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLP-PVLLGHSFGG 139 (322)
Q Consensus 85 ~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~-~~lvG~S~Gg 139 (322)
.+-.++++|-.|- ..+..++++.+..+.. .-..+ ++++|-+.|=
T Consensus 66 ~~~~~i~Ld~~Gk----------~~sS~~fA~~l~~~~~-~g~~~i~F~IGG~~G~ 110 (155)
T PF02590_consen 66 PNDYVILLDERGK----------QLSSEEFAKKLERWMN-QGKSDIVFIIGGADGL 110 (155)
T ss_dssp TTSEEEEE-TTSE----------E--HHHHHHHHHHHHH-TTS-EEEEEE-BTTB-
T ss_pred CCCEEEEEcCCCc----------cCChHHHHHHHHHHHh-cCCceEEEEEecCCCC
Confidence 3578899999874 5788889998888877 33334 5799999983
No 343
>PRK10162 acetyl esterase; Provisional
Probab=29.49 E-value=1.3e+02 Score=24.92 Aligned_cols=67 Identities=12% Similarity=0.061 Sum_probs=37.9
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCC--CCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLG--QGESDAPPGTVAGSLQTHAGDVADFIQKN 125 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G--~G~S~~~~~~~~~~~~~~~~dl~~~l~~~ 125 (322)
.-|++++++|-...-..-...+.+.|.+.|..|-...++| ||.-..... .....+..+++.+++++.
T Consensus 247 ~lPp~~i~~g~~D~L~de~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~--~~~a~~~~~~~~~~l~~~ 315 (318)
T PRK10162 247 DVPPCFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRM--MDTADDALRDGAQFFTAQ 315 (318)
T ss_pred CCCCeEEEecCCCcCcChHHHHHHHHHHcCCCEEEEEECCCceehhhccCc--hHHHHHHHHHHHHHHHHH
Confidence 4578899998644332222356788888887666666555 544322211 123445556666666543
No 344
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=29.25 E-value=1.6e+02 Score=24.88 Aligned_cols=64 Identities=16% Similarity=0.155 Sum_probs=39.2
Q ss_pred chhhHhhhCCceEEEeCCC------------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEechhHHHHHH
Q 020741 77 HWLPFFADSGFDCYAVSLL------------GQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLPPVLLGHSFGGLIIQY 144 (322)
Q Consensus 77 ~~~~~l~~~g~~v~~~D~~------------G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~lvG~S~Gg~~a~~ 144 (322)
.+++.|.++|++|..+-+- |.=.|.+|.+ . ..++.....+++.++.++=++|-|+|=.+...
T Consensus 192 nIlr~L~~rg~~vtVVP~~t~~eeIl~~~pDGiflSNGPGD--P----~~~~~~i~~ik~l~~~~iPifGICLGHQllal 265 (368)
T COG0505 192 NILRELVKRGCRVTVVPADTSAEEILALNPDGIFLSNGPGD--P----APLDYAIETIKELLGTKIPIFGICLGHQLLAL 265 (368)
T ss_pred HHHHHHHHCCCeEEEEcCCCCHHHHHhhCCCEEEEeCCCCC--h----hHHHHHHHHHHHHhccCCCeEEEcHHHHHHHH
Confidence 5788899999998876432 2223333333 2 33344444455344466679999999887655
Q ss_pred HH
Q 020741 145 YI 146 (322)
Q Consensus 145 ~a 146 (322)
+.
T Consensus 266 A~ 267 (368)
T COG0505 266 AL 267 (368)
T ss_pred hc
Confidence 54
No 345
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=29.01 E-value=45 Score=22.56 Aligned_cols=37 Identities=14% Similarity=0.168 Sum_probs=26.3
Q ss_pred EEEEcCCCcchhhcccchhhHhhhC-CceEEEeCC--CCCCCC
Q 020741 61 LVFVHGSYHAAWCWAEHWLPFFADS-GFDCYAVSL--LGQGES 100 (322)
Q Consensus 61 vl~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~D~--~G~G~S 100 (322)
||++.|.+++..+ .+++.|+++ |+.++..|- +-.+..
T Consensus 1 vI~I~G~~gsGKS---T~a~~La~~~~~~~i~~d~~~~~~~~~ 40 (121)
T PF13207_consen 1 VIIISGPPGSGKS---TLAKELAERLGFPVISMDDLIREPGWI 40 (121)
T ss_dssp EEEEEESTTSSHH---HHHHHHHHHHTCEEEEEHHHHCCGTHC
T ss_pred CEEEECCCCCCHH---HHHHHHHHHHCCeEEEecceEEecccc
Confidence 6888998777664 346777776 899988887 444444
No 346
>COG5023 Tubulin [Cytoskeleton]
Probab=28.94 E-value=1.7e+02 Score=24.84 Aligned_cols=55 Identities=31% Similarity=0.417 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHhCC--C--CcEEEEechhHH----HHHHHHHHHhhhhhccccCCCCC-cceEEEeccC
Q 020741 111 LQTHAGDVADFIQKNLS--L--PPVLLGHSFGGL----IIQYYIARIRNEKMLEMETPYPE-IAGAVLVCSV 173 (322)
Q Consensus 111 ~~~~~~dl~~~l~~~~~--~--~~~lvG~S~Gg~----~a~~~a~~~~~~~~~~~~~~~p~-v~~~vl~~~~ 173 (322)
-.++.+|+.+.|++... + .=+++=||+||. ++..+..++.++ +|+ +..-..+-|.
T Consensus 109 G~e~~ddvmd~IrreAd~cD~LqGF~l~HS~gGGTGSG~GslLLerl~~e--------ypkK~~~tfSV~P~ 172 (443)
T COG5023 109 GKEIIDDVMDMIRREADGCDGLQGFLLLHSLGGGTGSGLGSLLLERLREE--------YPKKIKLTFSVFPA 172 (443)
T ss_pred hHHHHHHHHHHHHHHhhcCccccceeeeeeccCcCcccHHHHHHHHHHHh--------cchhheeEEEeccC
Confidence 45788888888886543 2 236777887765 455566665543 776 5554445443
No 347
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=28.90 E-value=47 Score=20.36 Aligned_cols=32 Identities=25% Similarity=0.377 Sum_probs=18.2
Q ss_pred CCCcEEEEcCCC-cchhhcccchhhHhh-hCCceEEEe
Q 020741 57 KRPPLVFVHGSY-HAAWCWAEHWLPFFA-DSGFDCYAV 92 (322)
Q Consensus 57 ~~~~vl~~HG~~-~~~~~~~~~~~~~l~-~~g~~v~~~ 92 (322)
..|.++++||.. ...+. ++...+ ++|..++.+
T Consensus 30 ~~~~~~lvhGga~~GaD~----iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 30 RHPDMVLVHGGAPKGADR----IAARWARERGVPVIRF 63 (71)
T ss_pred hCCCEEEEECCCCCCHHH----HHHHHHHHCCCeeEEe
Confidence 346788999976 44443 333333 356666554
No 348
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=28.81 E-value=1.4e+02 Score=25.22 Aligned_cols=67 Identities=13% Similarity=0.208 Sum_probs=36.1
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEE
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLPPVLL 133 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~lv 133 (322)
...+|+.+-|.-.|+- .+..|.++||.|+.+-+.-+..+.. ......+...|...+.+ .++-++.++
T Consensus 3 ~~kV~v~mSGGVDSSV-----aA~lLk~QGyeViGl~m~~~~~~~~----~~C~s~~d~~da~~va~-~LGIp~~~v 69 (356)
T COG0482 3 KKKVLVGMSGGVDSSV-----AAYLLKEQGYEVIGLFMKNWDEDGG----GGCCSEEDLRDAERVAD-QLGIPLYVV 69 (356)
T ss_pred CcEEEEEccCCHHHHH-----HHHHHHHcCCeEEEEEEEeeccCCC----CcCCchhHHHHHHHHHH-HhCCceEEE
Confidence 3456666666433332 2456778999999998876654111 12333444455555544 444444443
No 349
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=28.06 E-value=41 Score=29.41 Aligned_cols=52 Identities=21% Similarity=0.172 Sum_probs=31.9
Q ss_pred EEEeeCCCCccChhhHHHHhhhcCceeEEecCCcccceeccchhhhHHHHHHHHhh
Q 020741 264 LVLGAKDDFIVDAQGLSETGSFYGVLPVCVEGVAHDMMLDCSWEKGASVILSWLDG 319 (322)
Q Consensus 264 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~ 319 (322)
-+++|+.|..|+.+.++... ......+.++ +.|..++.+ +++.+.|.+||+.
T Consensus 370 ~~~y~dGDGTV~~~S~~~~~-~~~~~~~~l~-~~H~~il~n--~~v~~~I~~fL~~ 421 (440)
T PLN02733 370 EYTYVDGDGTVPVESAKADG-LNAVARVGVP-GDHRGILRD--EHVFRILKHWLKV 421 (440)
T ss_pred eEEEeCCCCEEecchhhccC-ccccccccCC-chHHHHhcC--HHHHHHHHHHHhc
Confidence 34445556666655544321 2223445555 789888875 5899999999954
No 350
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=27.82 E-value=42 Score=24.26 Aligned_cols=24 Identities=25% Similarity=0.458 Sum_probs=16.3
Q ss_pred HHHHHHhCCCCcEEEEechhHHHH
Q 020741 119 ADFIQKNLSLPPVLLGHSFGGLII 142 (322)
Q Consensus 119 ~~~l~~~~~~~~~lvG~S~Gg~~a 142 (322)
.+.|++.+.+-.+++|.|.|+++.
T Consensus 59 ~~~i~~~~~~G~vi~G~SAGA~i~ 82 (154)
T PF03575_consen 59 DEAIREAYRKGGVIIGTSAGAMIL 82 (154)
T ss_dssp HHHHHHHHHTTSEEEEETHHHHCT
T ss_pred HHHHHHHHHCCCEEEEEChHHhhc
Confidence 344443444448899999999884
No 351
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=27.66 E-value=62 Score=26.57 Aligned_cols=20 Identities=15% Similarity=0.287 Sum_probs=16.9
Q ss_pred CCCCcEEEEcCCCcchhhcc
Q 020741 56 EKRPPLVFVHGSYHAAWCWA 75 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~ 75 (322)
+.+|.+|=+||+.|+...|.
T Consensus 107 p~KPLvLSfHG~tGTGKN~V 126 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGKNYV 126 (344)
T ss_pred CCCCeEEEecCCCCCchhHH
Confidence 58899999999988877664
No 352
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=27.61 E-value=1.8e+02 Score=21.92 Aligned_cols=37 Identities=14% Similarity=0.059 Sum_probs=19.2
Q ss_pred EEEeCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhC
Q 020741 89 CYAVSLLGQGESDAPPGT-VAGSLQTHAGDVADFIQKNL 126 (322)
Q Consensus 89 v~~~D~~G~G~S~~~~~~-~~~~~~~~~~dl~~~l~~~~ 126 (322)
+|++| ||||..+.-... ....-.++.-++...+.+.|
T Consensus 2 ~I~iD-pGHGg~d~GA~~~~g~~E~~~~l~ia~~l~~~L 39 (189)
T TIGR02883 2 IIVID-PGHGGIDGGAVGKDGTLEKDITLEIALKLKDYL 39 (189)
T ss_pred EEEEe-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHH
Confidence 56677 799987644332 11333444445544444333
No 353
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=27.49 E-value=94 Score=19.52 Aligned_cols=26 Identities=12% Similarity=-0.008 Sum_probs=18.8
Q ss_pred CcchhhcccchhhHhhhCCceEEEeC
Q 020741 68 YHAAWCWAEHWLPFFADSGFDCYAVS 93 (322)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~g~~v~~~D 93 (322)
|.........++..|++.|++|+.+|
T Consensus 9 G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 9 GVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred CCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 33344444567888888899999998
No 354
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=27.26 E-value=95 Score=22.90 Aligned_cols=73 Identities=19% Similarity=0.090 Sum_probs=40.7
Q ss_pred EEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCCCCCCC----CCCCCHHHHHHHHHHHHHHhCC-CCcEEEEec
Q 020741 62 VFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGESDAPPG----TVAGSLQTHAGDVADFIQKNLS-LPPVLLGHS 136 (322)
Q Consensus 62 l~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~----~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S 136 (322)
|++-|.|++...-. +++..|..+ |+.-.+-+|..-.|..... ..+|.++.... ..++ .++ .-=+|+|.|
T Consensus 44 vl~cGNGgSaadAq-Hfaael~gR-f~~eR~~lpaIaLt~dsS~lTai~NDy~yd~vFs---Rqve-A~g~~GDvLigIS 117 (176)
T COG0279 44 VLACGNGGSAADAQ-HFAAELTGR-FEKERPSLPAIALSTDSSVLTAIANDYGYDEVFS---RQVE-ALGQPGDVLIGIS 117 (176)
T ss_pred EEEECCCcchhhHH-HHHHHHhhH-HHhcCCCCCeeEeecccHHHhhhhccccHHHHHH---HHHH-hcCCCCCEEEEEe
Confidence 45556666665554 677777766 6655555555444422211 23455554433 3344 455 445788888
Q ss_pred hhHH
Q 020741 137 FGGL 140 (322)
Q Consensus 137 ~Gg~ 140 (322)
.-|.
T Consensus 118 TSGN 121 (176)
T COG0279 118 TSGN 121 (176)
T ss_pred CCCC
Confidence 8774
No 355
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=27.23 E-value=1.6e+02 Score=26.39 Aligned_cols=39 Identities=26% Similarity=0.388 Sum_probs=27.0
Q ss_pred CHHHHHHHHHHHHHHhCC-CCcEEEEe-chhHHHHHHHHHH
Q 020741 110 SLQTHAGDVADFIQKNLS-LPPVLLGH-SFGGLIIQYYIAR 148 (322)
Q Consensus 110 ~~~~~~~dl~~~l~~~~~-~~~~lvG~-S~Gg~~a~~~a~~ 148 (322)
-++++++|+...+.+.++ .|-.++|| |=||.+|..++.+
T Consensus 382 yLe~fa~d~~~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~ 422 (550)
T PF00862_consen 382 YLEEFADDAEREILAELQGKPDLIIGNYSDGNLVASLLSRK 422 (550)
T ss_dssp GHHHHHHHHHHHHHHHHTS--SEEEEEHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCCCCcEEEeccCcchHHHHHHHhh
Confidence 467888888776654665 67777776 6777777777765
No 356
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=26.97 E-value=1.8e+02 Score=21.23 Aligned_cols=56 Identities=16% Similarity=0.016 Sum_probs=37.7
Q ss_pred hhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC-cEEEEechhHHHHHHHH
Q 020741 78 WLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLP-PVLLGHSFGGLIIQYYI 146 (322)
Q Consensus 78 ~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~-~~lvG~S~Gg~~a~~~a 146 (322)
+...+.+ |-.|++.|.+|- ..+.+++++.+..+-+ .|.. .+++|-|.|=--++...
T Consensus 60 il~~i~~-~~~vi~Ld~~Gk----------~~sSe~fA~~l~~~~~--~G~~i~f~IGG~~Gl~~~~~~~ 116 (155)
T COG1576 60 ILAAIPK-GSYVVLLDIRGK----------ALSSEEFADFLERLRD--DGRDISFLIGGADGLSEAVKAR 116 (155)
T ss_pred HHHhcCC-CCeEEEEecCCC----------cCChHHHHHHHHHHHh--cCCeEEEEEeCcccCCHHHHHH
Confidence 3444433 679999999963 4677777777776655 3344 46899999866665553
No 357
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=26.92 E-value=59 Score=26.49 Aligned_cols=17 Identities=29% Similarity=0.303 Sum_probs=15.6
Q ss_pred EEEEechhHHHHHHHHH
Q 020741 131 VLLGHSFGGLIIQYYIA 147 (322)
Q Consensus 131 ~lvG~S~Gg~~a~~~a~ 147 (322)
.+.|-|.||.+|+.++.
T Consensus 37 ~i~GTSaGaiia~~la~ 53 (288)
T cd07213 37 LFAGTSAGSLIALGLAL 53 (288)
T ss_pred EEEEeCHHHHHHHHHHc
Confidence 68999999999999984
No 358
>PRK07053 glutamine amidotransferase; Provisional
Probab=26.91 E-value=3.2e+02 Score=21.55 Aligned_cols=33 Identities=15% Similarity=0.223 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHhCCCCcEEEEechhHHHHHHHH
Q 020741 114 HAGDVADFIQKNLSLPPVLLGHSFGGLIIQYYI 146 (322)
Q Consensus 114 ~~~dl~~~l~~~~~~~~~lvG~S~Gg~~a~~~a 146 (322)
+..++.++|++.+...+-++|.|+|..+...+.
T Consensus 68 ~~~~~~~~i~~~~~~~~PvlGIC~G~Qlla~al 100 (234)
T PRK07053 68 FLAPEIALLRQRLAAGLPTLGICLGAQLIARAL 100 (234)
T ss_pred cHHHHHHHHHHHHHCCCCEEEECccHHHHHHHc
Confidence 445666666644445566999999999877766
No 359
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=26.74 E-value=62 Score=23.89 Aligned_cols=19 Identities=26% Similarity=0.179 Sum_probs=15.8
Q ss_pred CCcEEEEechhHHHHHHHH
Q 020741 128 LPPVLLGHSFGGLIIQYYI 146 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~a~~~a 146 (322)
..-.+.|-|.||.+++.++
T Consensus 27 ~~d~i~GtS~Gal~a~~~~ 45 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLA 45 (204)
T ss_dssp T-SEEEEECCHHHHHHHHH
T ss_pred CccEEEEcChhhhhHHHHH
Confidence 3347999999999998888
No 360
>KOG2316 consensus Predicted ATPase (PP-loop superfamily) [General function prediction only]
Probab=26.67 E-value=65 Score=24.87 Aligned_cols=67 Identities=10% Similarity=0.086 Sum_probs=42.1
Q ss_pred hhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCc-EEEEechhHHHHHHHH
Q 020741 78 WLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLPP-VLLGHSFGGLIIQYYI 146 (322)
Q Consensus 78 ~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~-~lvG~S~Gg~~a~~~a 146 (322)
.++.+++. ..+=.+-.+=-|.|.........+-.+-++|+-+++. ...+++ -+=|.|.|++++-.--
T Consensus 55 ~i~lyaec-m~lPlyrr~i~g~s~nq~l~Y~~t~~DEvEDLy~ll~-~VK~~~p~~eaVS~GAIlS~YQr 122 (277)
T KOG2316|consen 55 VIDLYAEC-MGLPLYRRRIRGRSINQKLQYTKTEGDEVEDLYELLK-TVKEKIPDVEAVSVGAILSDYQR 122 (277)
T ss_pred HHHHHHHH-hcCceeeeeccCcccccccccccCCCchHHHHHHHHH-HHHhhCCCceeeehhhhHhHHHH
Confidence 34555553 3333333333366655555445677788999999988 555444 7889999998875543
No 361
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=26.59 E-value=47 Score=23.14 Aligned_cols=33 Identities=9% Similarity=0.118 Sum_probs=23.2
Q ss_pred EEEEcCCCcchhhcccchhhHhhhCCceEEEeCC
Q 020741 61 LVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSL 94 (322)
Q Consensus 61 vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~ 94 (322)
++...|..++-..+. .+++.|.++|++|...-.
T Consensus 2 li~~~Gt~Ghv~P~l-ala~~L~~rGh~V~~~~~ 34 (139)
T PF03033_consen 2 LIATGGTRGHVYPFL-ALARALRRRGHEVRLATP 34 (139)
T ss_dssp EEEEESSHHHHHHHH-HHHHHHHHTT-EEEEEET
T ss_pred EEEEcCChhHHHHHH-HHHHHHhccCCeEEEeec
Confidence 455666677777776 788999999999875443
No 362
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=26.58 E-value=92 Score=22.08 Aligned_cols=35 Identities=11% Similarity=0.078 Sum_probs=24.6
Q ss_pred EEEEcCCCcchhhcccchhhHhhhCCceEEEeCCC
Q 020741 61 LVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLL 95 (322)
Q Consensus 61 vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~ 95 (322)
.|-+=|......-+...+.++|.++||+|+-++..
T Consensus 18 ~IAvVG~S~~P~r~sy~V~kyL~~~GY~ViPVNP~ 52 (140)
T COG1832 18 TIAVVGASDKPDRPSYRVAKYLQQKGYRVIPVNPK 52 (140)
T ss_pred eEEEEecCCCCCccHHHHHHHHHHCCCEEEeeCcc
Confidence 34455665555544445788999999999998864
No 363
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=26.39 E-value=62 Score=27.26 Aligned_cols=17 Identities=24% Similarity=0.264 Sum_probs=15.3
Q ss_pred EEEEechhHHHHHHHHH
Q 020741 131 VLLGHSFGGLIIQYYIA 147 (322)
Q Consensus 131 ~lvG~S~Gg~~a~~~a~ 147 (322)
.+.|.|.||.+|..++.
T Consensus 44 lIaGTStGgIIAa~la~ 60 (344)
T cd07217 44 FVGGTSTGSIIAACIAL 60 (344)
T ss_pred EEEEecHHHHHHHHHHc
Confidence 58899999999999984
No 364
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=26.18 E-value=1.2e+02 Score=26.53 Aligned_cols=20 Identities=25% Similarity=0.526 Sum_probs=17.3
Q ss_pred CCcEEEEechhHHHHHHHHH
Q 020741 128 LPPVLLGHSFGGLIIQYYIA 147 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~a~~~a~ 147 (322)
.+=++.|-|.|+.+|..++.
T Consensus 101 ~p~vIsGTSaGAivAal~as 120 (421)
T cd07230 101 LPRIISGSSAGSIVAAILCT 120 (421)
T ss_pred CCCEEEEECHHHHHHHHHHc
Confidence 45589999999999999985
No 365
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=25.80 E-value=2.1e+02 Score=24.77 Aligned_cols=58 Identities=16% Similarity=0.041 Sum_probs=32.0
Q ss_pred hhHhhhC--CceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEechhHH
Q 020741 79 LPFFADS--GFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGGL 140 (322)
Q Consensus 79 ~~~l~~~--g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~ 140 (322)
.+.+.++ -|.||.+|.|.++.|.... .+......++.....+.+. +-++++-.+.+..
T Consensus 281 l~~~~~~g~~fDlIilDPPsF~r~k~~~----~~~~rdy~~l~~~~~~iL~pgG~l~~~s~~~~~ 341 (393)
T COG1092 281 LRKAERRGEKFDLIILDPPSFARSKKQE----FSAQRDYKDLNDLALRLLAPGGTLVTSSCSRHF 341 (393)
T ss_pred HHHHHhcCCcccEEEECCcccccCcccc----hhHHHHHHHHHHHHHHHcCCCCEEEEEecCCcc
Confidence 3444443 3999999999999886654 2333333333333332555 4444444444333
No 366
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=25.65 E-value=1.7e+02 Score=21.42 Aligned_cols=52 Identities=15% Similarity=0.104 Sum_probs=33.2
Q ss_pred hhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEechhHHHH
Q 020741 79 LPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFGGLII 142 (322)
Q Consensus 79 ~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~Gg~~a 142 (322)
...+.. +-.++++|-+|- ..+..++++.+..+.+ .-. .-++++|-+.|=.-.
T Consensus 61 l~~l~~-~~~~i~LDe~Gk----------~~sS~~fA~~l~~~~~-~g~~~i~F~IGGa~G~~~~ 113 (157)
T PRK00103 61 LAALPK-GARVIALDERGK----------QLSSEEFAQELERWRD-DGRSDVAFVIGGADGLSPA 113 (157)
T ss_pred HhhCCC-CCEEEEEcCCCC----------cCCHHHHHHHHHHHHh-cCCccEEEEEcCccccCHH
Confidence 334433 346899998864 4677788888887755 222 345688888774433
No 367
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=25.50 E-value=1.3e+02 Score=24.15 Aligned_cols=19 Identities=26% Similarity=0.462 Sum_probs=16.7
Q ss_pred cEEEEechhHHHHHHHHHH
Q 020741 130 PVLLGHSFGGLIIQYYIAR 148 (322)
Q Consensus 130 ~~lvG~S~Gg~~a~~~a~~ 148 (322)
=.++|.|.|+.++..++..
T Consensus 29 d~i~GtSaGAi~a~~~~~g 47 (266)
T cd07208 29 DLVIGVSAGALNAASYLSG 47 (266)
T ss_pred CEEEEECHHHHhHHHHHhC
Confidence 3799999999999999854
No 368
>PRK07933 thymidylate kinase; Validated
Probab=25.48 E-value=1.1e+02 Score=23.53 Aligned_cols=40 Identities=15% Similarity=0.150 Sum_probs=27.6
Q ss_pred EEEEcCC-CcchhhcccchhhHhhhCCceEEEeCCCCCCCC
Q 020741 61 LVFVHGS-YHAAWCWAEHWLPFFADSGFDCYAVSLLGQGES 100 (322)
Q Consensus 61 vl~~HG~-~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S 100 (322)
+|.+=|. |+....-...+.+.|..+|+.|+....|++|.+
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~ 42 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRS 42 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 3455565 333444345678889889999999999977643
No 369
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=25.44 E-value=1.4e+02 Score=21.65 Aligned_cols=46 Identities=11% Similarity=0.045 Sum_probs=30.6
Q ss_pred ceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEechhHHHHH
Q 020741 87 FDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLPPVLLGHSFGGLIIQ 143 (322)
Q Consensus 87 ~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~lvG~S~Gg~~a~ 143 (322)
-.++++|-+|- ..+..++++.+..+.+ .-.+-++++|-+.|=.-.+
T Consensus 66 ~~~i~LDe~Gk----------~~sS~~fA~~l~~~~~-~g~~i~FvIGGa~G~~~~v 111 (153)
T TIGR00246 66 AHVVTLDIPGK----------PWTTPQLADTLEKWKT-DGRDVTLLIGGPEGLSPTC 111 (153)
T ss_pred CeEEEEcCCCC----------cCCHHHHHHHHHHHhc-cCCeEEEEEcCCCcCCHHH
Confidence 46889998864 4677788888877654 2223346888887754443
No 370
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=24.90 E-value=1.3e+02 Score=26.12 Aligned_cols=20 Identities=35% Similarity=0.512 Sum_probs=17.5
Q ss_pred CCcEEEEechhHHHHHHHHH
Q 020741 128 LPPVLLGHSFGGLIIQYYIA 147 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~a~~~a~ 147 (322)
.+=++.|-|.|+.+|..++.
T Consensus 95 lp~iI~GtSAGAivaalla~ 114 (407)
T cd07232 95 LPNVISGTSGGSLVAALLCT 114 (407)
T ss_pred CCCEEEEECHHHHHHHHHHc
Confidence 55579999999999999995
No 371
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=24.44 E-value=97 Score=22.73 Aligned_cols=39 Identities=10% Similarity=0.098 Sum_probs=29.6
Q ss_pred cEEEEcCCCcc-hhhcccchhhHhhhCCceEEEeCCCCCC
Q 020741 60 PLVFVHGSYHA-AWCWAEHWLPFFADSGFDCYAVSLLGQG 98 (322)
Q Consensus 60 ~vl~~HG~~~~-~~~~~~~~~~~l~~~g~~v~~~D~~G~G 98 (322)
.|+=+-|+..+ .....+.+++.|.++||+|.++-.-+|+
T Consensus 3 ~Il~ivG~k~SGKTTLie~lv~~L~~~G~rVa~iKH~hh~ 42 (161)
T COG1763 3 KILGIVGYKNSGKTTLIEKLVRKLKARGYRVATVKHAHHD 42 (161)
T ss_pred cEEEEEecCCCChhhHHHHHHHHHHhCCcEEEEEEecCCC
Confidence 46666676433 3344467889999999999999999998
No 372
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=24.41 E-value=1.5e+02 Score=24.70 Aligned_cols=20 Identities=30% Similarity=0.574 Sum_probs=17.2
Q ss_pred CCcEEEEechhHHHHHHHHH
Q 020741 128 LPPVLLGHSFGGLIIQYYIA 147 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~a~~~a~ 147 (322)
.+-++.|-|.|+.+|..++.
T Consensus 96 ~p~~i~GsSaGAivaa~~~~ 115 (323)
T cd07231 96 LPRVIAGSSVGSIVCAIIAT 115 (323)
T ss_pred CCCEEEEECHHHHHHHHHHc
Confidence 55679999999999999884
No 373
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=23.99 E-value=1.5e+02 Score=23.42 Aligned_cols=33 Identities=12% Similarity=0.175 Sum_probs=22.9
Q ss_pred EEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCC
Q 020741 61 LVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLG 96 (322)
Q Consensus 61 vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G 96 (322)
+++|-|..+.-. ..+++.|.++|++|+..+...
T Consensus 11 ~vlItG~s~gIG---~~la~~l~~~G~~v~~~~~~~ 43 (266)
T PRK06171 11 IIIVTGGSSGIG---LAIVKELLANGANVVNADIHG 43 (266)
T ss_pred EEEEeCCCChHH---HHHHHHHHHCCCEEEEEeCCc
Confidence 456666544332 256788989999999988653
No 374
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=23.98 E-value=4.6e+02 Score=22.44 Aligned_cols=32 Identities=16% Similarity=0.175 Sum_probs=23.7
Q ss_pred CCcEEEEec-hhHHHHHHHHHHHhhhhhccccCCCCCcceEEEeccC
Q 020741 128 LPPVLLGHS-FGGLIIQYYIARIRNEKMLEMETPYPEIAGAVLVCSV 173 (322)
Q Consensus 128 ~~~~lvG~S-~Gg~~a~~~a~~~~~~~~~~~~~~~p~v~~~vl~~~~ 173 (322)
.+|.|+|-. .|+.++..++ .-.+..+++++.-
T Consensus 136 ~~VlvvG~GG~Gs~ia~~La--------------~~Gvg~i~lvD~d 168 (376)
T PRK08762 136 ARVLLIGAGGLGSPAALYLA--------------AAGVGTLGIVDHD 168 (376)
T ss_pred CcEEEECCCHHHHHHHHHHH--------------HcCCCeEEEEeCC
Confidence 789999885 6777777777 3347888888863
No 375
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=23.74 E-value=1.9e+02 Score=27.38 Aligned_cols=36 Identities=19% Similarity=0.277 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHhC--CCCc-EEEEechhHHHHHHHHH
Q 020741 112 QTHAGDVADFIQKNL--SLPP-VLLGHSFGGLIIQYYIA 147 (322)
Q Consensus 112 ~~~~~dl~~~l~~~~--~~~~-~lvG~S~Gg~~a~~~a~ 147 (322)
.....++.+.+...+ +-++ ++.|.|.||+.+..+|.
T Consensus 47 ~~~Y~~l~~~l~~~~~~~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 47 EAVYGALLELLGAHLRLRVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred hhHHHHHHHHhhhhhccCCCCceEEeeCHHHHHHHHHHc
Confidence 344455555554333 2344 78999999999999885
No 376
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=23.71 E-value=1.4e+02 Score=25.74 Aligned_cols=20 Identities=30% Similarity=0.486 Sum_probs=17.5
Q ss_pred CCcEEEEechhHHHHHHHHH
Q 020741 128 LPPVLLGHSFGGLIIQYYIA 147 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~a~~~a~ 147 (322)
.+=++.|-|.|+.+|..+|.
T Consensus 111 ~p~~i~GtS~Gaivaa~~a~ 130 (391)
T cd07229 111 LPRIITGTATGALIAALVGV 130 (391)
T ss_pred CCceEEEecHHHHHHHHHHc
Confidence 55579999999999999995
No 377
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=23.46 E-value=92 Score=24.71 Aligned_cols=35 Identities=11% Similarity=-0.019 Sum_probs=23.6
Q ss_pred EEEEcCC--CcchhhcccchhhHhhhCCceEEEeCCC
Q 020741 61 LVFVHGS--YHAAWCWAEHWLPFFADSGFDCYAVSLL 95 (322)
Q Consensus 61 vl~~HG~--~~~~~~~~~~~~~~l~~~g~~v~~~D~~ 95 (322)
+|.+-|. |..+..-...++..|.+.|.+|+++|+-
T Consensus 3 ~iai~s~kGGvG~TTltAnLA~aL~~~G~~VlaID~d 39 (243)
T PF06564_consen 3 VIAIVSPKGGVGKTTLTANLAWALARLGESVLAIDLD 39 (243)
T ss_pred EEEEecCCCCCCHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 4555554 2222223346888999999999999974
No 378
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=23.24 E-value=97 Score=21.43 Aligned_cols=33 Identities=12% Similarity=0.186 Sum_probs=18.9
Q ss_pred CCCCcEEEEc-CCCcchhhcccchhhHhhhCCceEEEeC
Q 020741 56 EKRPPLVFVH-GSYHAAWCWAEHWLPFFADSGFDCYAVS 93 (322)
Q Consensus 56 ~~~~~vl~~H-G~~~~~~~~~~~~~~~l~~~g~~v~~~D 93 (322)
++.++||++. |...+... ...|...||.|..+|
T Consensus 85 ~~~~vvvyC~~~G~rs~~a-----~~~L~~~G~~v~~L~ 118 (128)
T cd01520 85 RDPKLLIYCARGGMRSQSL-----AWLLESLGIDVPLLE 118 (128)
T ss_pred CCCeEEEEeCCCCccHHHH-----HHHHHHcCCceeEeC
Confidence 4677888885 43333322 234555689866554
No 379
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=23.12 E-value=1.4e+02 Score=25.75 Aligned_cols=25 Identities=20% Similarity=0.162 Sum_probs=20.1
Q ss_pred cchhhHhhhCCceEEEeCC-CCCCCC
Q 020741 76 EHWLPFFADSGFDCYAVSL-LGQGES 100 (322)
Q Consensus 76 ~~~~~~l~~~g~~v~~~D~-~G~G~S 100 (322)
-+++..|+.+|++|+++|+ -..|..
T Consensus 125 ~nLA~~LA~~G~rVLlIDl~DpQ~nl 150 (387)
T PHA02519 125 VHTAQWLALQGHRVLLIEGNDPQGTA 150 (387)
T ss_pred HHHHHHHHhCCCcEEEEeCCCCCCCc
Confidence 3678889999999999996 666553
No 380
>PRK00889 adenylylsulfate kinase; Provisional
Probab=23.06 E-value=1.3e+02 Score=22.18 Aligned_cols=37 Identities=16% Similarity=0.118 Sum_probs=23.6
Q ss_pred CCcEEEEcCCCcchh-hcccchhhHhhhCCceEEEeCC
Q 020741 58 RPPLVFVHGSYHAAW-CWAEHWLPFFADSGFDCYAVSL 94 (322)
Q Consensus 58 ~~~vl~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~D~ 94 (322)
.+.++.+.|.+++.. .....++..|...|..++.+|-
T Consensus 3 ~g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 3 RGVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 345888889865544 4434566677666777777753
No 381
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=23.04 E-value=2.4e+02 Score=20.38 Aligned_cols=19 Identities=21% Similarity=0.137 Sum_probs=16.1
Q ss_pred CCcEEEEechhHHHHHHHH
Q 020741 128 LPPVLLGHSFGGLIIQYYI 146 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~a~~~a 146 (322)
..-++.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 3347889999999999888
No 382
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=23.00 E-value=2.5e+02 Score=21.63 Aligned_cols=29 Identities=24% Similarity=0.369 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHhC---C-CCcEEEEechhHHHH
Q 020741 114 HAGDVADFIQKNL---S-LPPVLLGHSFGGLII 142 (322)
Q Consensus 114 ~~~dl~~~l~~~~---~-~~~~lvG~S~Gg~~a 142 (322)
..+++.+.|++.+ + -..+++-||+||..+
T Consensus 106 ~~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTG 138 (216)
T PF00091_consen 106 ALEEILEQIRKEIEKCDSLDGFFIVHSLGGGTG 138 (216)
T ss_dssp HHHHHHHHHHHHHHTSTTESEEEEEEESSSSHH
T ss_pred cccccccccchhhccccccccceecccccceec
Confidence 4444455454443 4 667888889888753
No 383
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=22.94 E-value=1e+02 Score=23.22 Aligned_cols=30 Identities=17% Similarity=0.139 Sum_probs=18.8
Q ss_pred EEEcCCCcchhhcccchhhHhhhCCceEEEeCCC
Q 020741 62 VFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLL 95 (322)
Q Consensus 62 l~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~ 95 (322)
|.+.|.|.-.. .++-.|++.|+.|+.+|.-
T Consensus 3 I~ViGlGyvGl----~~A~~lA~~G~~V~g~D~~ 32 (185)
T PF03721_consen 3 IAVIGLGYVGL----PLAAALAEKGHQVIGVDID 32 (185)
T ss_dssp EEEE--STTHH----HHHHHHHHTTSEEEEE-S-
T ss_pred EEEECCCcchH----HHHHHHHhCCCEEEEEeCC
Confidence 44556654433 4567899999999999963
No 384
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=22.86 E-value=3.4e+02 Score=20.42 Aligned_cols=60 Identities=10% Similarity=0.173 Sum_probs=34.1
Q ss_pred CCcEEEEcCCCcchhhccc----chhhHhhhCCceEEEeCCCCC---CCCCCCCCCCCCCHHHHHHHHHHHHH
Q 020741 58 RPPLVFVHGSYHAAWCWAE----HWLPFFADSGFDCYAVSLLGQ---GESDAPPGTVAGSLQTHAGDVADFIQ 123 (322)
Q Consensus 58 ~~~vl~~HG~~~~~~~~~~----~~~~~l~~~g~~v~~~D~~G~---G~S~~~~~~~~~~~~~~~~dl~~~l~ 123 (322)
+.+||+++-+ +...|.. .-...|.+.|+.|+-+. +|+ |...... ..++++.++.+..++.
T Consensus 113 ~~pvvi~Pam--n~~m~~~p~~~~Nl~~L~~~G~~vi~p~-~g~la~~~~g~g~---~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 113 TTPKLIAPAM--NTKMYENPATQRNLKTLKEDGVQEIEPK-EGLLACGDEGYGA---LADIETILETIENTLK 179 (182)
T ss_pred CCCEEEEECC--CHHHhcCHHHHHHHHHHHHCCCEEECCC-CCccccCCccCCC---CCCHHHHHHHHHHHhc
Confidence 5667777753 2333431 12567778898888776 444 4433322 3466666666665554
No 385
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=22.73 E-value=3.3e+02 Score=20.24 Aligned_cols=52 Identities=8% Similarity=0.019 Sum_probs=33.0
Q ss_pred hhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CCcEEEEechh
Q 020741 82 FADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS-LPPVLLGHSFG 138 (322)
Q Consensus 82 l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-~~~~lvG~S~G 138 (322)
|.+.|++.+.+|.=+.=..... ..-..++.+.+.++.+ ..+ +++.++-.|.|
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~~----~~i~~~~~~~~~~l~~-~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPYE----DEIPPEYAEWLNELKK-QFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCCc----CcCCHHHHHHHHHHHH-HCCCCeEEEEECCCC
Confidence 8888999999998654211111 1223345555555555 555 68999999986
No 386
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=22.67 E-value=1.2e+02 Score=20.62 Aligned_cols=34 Identities=21% Similarity=0.289 Sum_probs=22.1
Q ss_pred EEcCCCcchhhcccchhhHhhhCCceEEEeCCCC
Q 020741 63 FVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLG 96 (322)
Q Consensus 63 ~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G 96 (322)
.+=|...+...|...+.+.|.++||.|+.++.++
T Consensus 4 AVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~ 37 (116)
T PF13380_consen 4 AVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKG 37 (116)
T ss_dssp EEET--SSTTSHHHHHHHHHHHTT-EEEEESTTC
T ss_pred EEEcccCCCCChHHHHHHHHHhCCCEEEEECCCc
Confidence 3445554545555457788888999999999886
No 387
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=22.62 E-value=2.7e+02 Score=20.16 Aligned_cols=62 Identities=21% Similarity=0.240 Sum_probs=41.6
Q ss_pred hhhHhhhCCc-eEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEEEEec-hhHHHHHHHHHHH
Q 020741 78 WLPFFADSGF-DCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLPPVLLGHS-FGGLIIQYYIARI 149 (322)
Q Consensus 78 ~~~~l~~~g~-~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~lvG~S-~Gg~~a~~~a~~~ 149 (322)
+.+.+...|. +|+.++.+.. ..++.+.+++-+.++++ ..+..++++|++ .|.-++-.+|.++
T Consensus 50 l~~~l~~~G~d~v~~~~~~~~---------~~~~~~~~a~~l~~~~~-~~~~~lVl~~~t~~g~~la~~lA~~L 113 (164)
T PF01012_consen 50 LRKALAKYGADKVYHIDDPAL---------AEYDPEAYADALAELIK-EEGPDLVLFGSTSFGRDLAPRLAARL 113 (164)
T ss_dssp HHHHHHSTTESEEEEEE-GGG---------TTC-HHHHHHHHHHHHH-HHT-SEEEEESSHHHHHHHHHHHHHH
T ss_pred HhhhhhhcCCcEEEEecCccc---------cccCHHHHHHHHHHHHH-hcCCCEEEEcCcCCCCcHHHHHHHHh
Confidence 3445665676 5888876532 13578889999999999 556668888876 5666777888773
No 388
>COG2876 AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=22.50 E-value=2.1e+02 Score=23.03 Aligned_cols=41 Identities=12% Similarity=0.194 Sum_probs=32.3
Q ss_pred CCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCC
Q 020741 56 EKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQ 97 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~ 97 (322)
..+.|||+--|++.+...|. .-++++..+|-.=+..--||.
T Consensus 150 ~~~kPvLLKRg~~aTieEwL-~AAEYI~s~GN~~vILCERGI 190 (286)
T COG2876 150 RQNKPVLLKRGLSATIEEWL-NAAEYILSHGNGNVILCERGI 190 (286)
T ss_pred ccCCCeEEecCccccHHHHH-HHHHHHHhCCCCcEEEEeccc
Confidence 46788999999999999998 778998888765454545554
No 389
>cd01301 rDP_like renal dipeptidase (rDP), best studied in mammals and also called membrane or microsomal dipeptidase, is a membrane-bound glycoprotein hydrolyzing dipeptides and is involved in hydrolytic metabolism of penem and carbapenem beta-lactam antibiotics. Although the biological function of the enzyme is still unknown, it has been suggested to play a role in the renal glutathione metabolism.
Probab=22.37 E-value=3.2e+02 Score=22.65 Aligned_cols=75 Identities=16% Similarity=0.260 Sum_probs=45.9
Q ss_pred CCcEEEEcCCCc----chhhcccchhhHhhhCCceEEEeCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcEE
Q 020741 58 RPPLVFVHGSYH----AAWCWAEHWLPFFADSGFDCYAVSL-LGQGESDAPPGTVAGSLQTHAGDVADFIQKNLSLPPVL 132 (322)
Q Consensus 58 ~~~vl~~HG~~~----~~~~~~~~~~~~l~~~g~~v~~~D~-~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~l 132 (322)
..|||+-|.... +.+...+.+++.++++| -|+.+.+ +.+-... ...+++++++.+..+++ ..+..-+-
T Consensus 188 ~~PviaSHsn~ral~~h~RNltD~~i~~ia~~G-Gvigi~~~~~fl~~~-----~~~~~~~~~~hi~~i~~-l~G~dhVg 260 (309)
T cd01301 188 NAPVIASHSNARALCDHPRNLTDAQLKAIAETG-GVIGVNFYPAFLSPG-----ADATLDDVVRHIDYIVD-LIGIDHVG 260 (309)
T ss_pred CCCEEEeccChHHhcCCCCCCCHHHHHHHHHcC-CEEEEeeeHHHhCCC-----CCCCHHHHHHHHHHHHH-hcCCCeEE
Confidence 567999998632 22223345678888875 3443332 2222111 13578888888888888 67766677
Q ss_pred EEechhH
Q 020741 133 LGHSFGG 139 (322)
Q Consensus 133 vG~S~Gg 139 (322)
+|-.+.|
T Consensus 261 iGsDfdg 267 (309)
T cd01301 261 LGSDFDG 267 (309)
T ss_pred ECcccCC
Confidence 7877765
No 390
>cd02033 BchX Chlorophyllide reductase converts chlorophylls into bacteriochlorophylls by reducing the chlorin B-ring. This family contains the X subunit of this three-subunit enzyme. Sequence and structure similarity between bchX, protochlorophyllide reductase L subunit (bchL and chlL) and nitrogenase Fe protein (nifH gene) suggest their functional similarity. Members of the BchX family serve as the unique electron donors to their respective catalytic subunits (bchN-bchB, bchY-bchZ and nitrogenase component 1). Mechanistically, they hydrolyze ATP and transfer electrons through a Fe4-S4 cluster.
Probab=22.27 E-value=1.3e+02 Score=25.17 Aligned_cols=38 Identities=11% Similarity=0.143 Sum_probs=25.3
Q ss_pred CCCcEEEEcCCCcchhhc-ccchhhHhhhCCceEEEeCC
Q 020741 57 KRPPLVFVHGSYHAAWCW-AEHWLPFFADSGFDCYAVSL 94 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~-~~~~~~~l~~~g~~v~~~D~ 94 (322)
++..+|.+.|-++..... ...++..|+++|++|+.+|.
T Consensus 29 ~~~~ii~v~gkgG~GKSt~a~nLa~~la~~g~rVllid~ 67 (329)
T cd02033 29 KKTQIIAIYGKGGIGKSFTLANLSYMMAQQGKRVLLIGC 67 (329)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEe
Confidence 344555555766554433 34577889999999998875
No 391
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=22.10 E-value=95 Score=25.09 Aligned_cols=40 Identities=15% Similarity=0.074 Sum_probs=26.9
Q ss_pred cEEEEcCCC-cchhhcccchhhHhhhCCceEEEeCCCCCCCC
Q 020741 60 PLVFVHGSY-HAAWCWAEHWLPFFADSGFDCYAVSLLGQGES 100 (322)
Q Consensus 60 ~vl~~HG~~-~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S 100 (322)
+|.++ |=| .......-.++..|+++|++|+.+|+=-.|..
T Consensus 3 ~i~~~-gKGGVGKTT~a~nLA~~La~~G~rVLliD~Dpq~n~ 43 (279)
T PRK13230 3 KFCFY-GKGGIGKSTTVCNIAAALAESGKKVLVVGCDPKADC 43 (279)
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHhCCCEEEEEeeCCcccc
Confidence 45555 543 33444334688899999999999997655543
No 392
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=21.94 E-value=2.6e+02 Score=18.85 Aligned_cols=72 Identities=18% Similarity=0.106 Sum_probs=44.3
Q ss_pred cEEEEcCCCcchhhcccchhhHhhhC-CceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC--CCcEEEEec
Q 020741 60 PLVFVHGSYHAAWCWAEHWLPFFADS-GFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQKNLS--LPPVLLGHS 136 (322)
Q Consensus 60 ~vl~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~--~~~~lvG~S 136 (322)
.||..||. -+.... ..++.+... -..+.++++. ...+.++..+.+.+.++ ..+ +.+.++.==
T Consensus 2 iii~sHG~--~A~g~~-~~~~~i~G~~~~~i~~~~~~-----------~~~~~~~~~~~l~~~i~-~~~~~~~vlil~Dl 66 (116)
T PF03610_consen 2 IIIASHGS--LAEGLL-ESAEMILGEDQDNIEAVDLY-----------PDESIEDFEEKLEEAIE-ELDEGDGVLILTDL 66 (116)
T ss_dssp EEEEEETT--HHHHHH-HHHHHHHTSTCSSEEEEEET-----------TTSCHHHHHHHHHHHHH-HCCTTSEEEEEESS
T ss_pred EEEEECcH--HHHHHH-HHHHHHcCCCcccEEEEECc-----------CCCCHHHHHHHHHHHHH-hccCCCcEEEEeeC
Confidence 47889993 333333 345666554 2467777764 13588999999999998 554 556666555
Q ss_pred hhHHHHHHHH
Q 020741 137 FGGLIIQYYI 146 (322)
Q Consensus 137 ~Gg~~a~~~a 146 (322)
+||...-.++
T Consensus 67 ~ggsp~n~a~ 76 (116)
T PF03610_consen 67 GGGSPFNEAA 76 (116)
T ss_dssp TTSHHHHHHH
T ss_pred CCCccchHHH
Confidence 5554444444
No 393
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=21.83 E-value=64 Score=26.62 Aligned_cols=16 Identities=38% Similarity=0.424 Sum_probs=14.6
Q ss_pred EEEEechhHHHHHHHH
Q 020741 131 VLLGHSFGGLIIQYYI 146 (322)
Q Consensus 131 ~lvG~S~Gg~~a~~~a 146 (322)
.+.|-|.||.+|+.++
T Consensus 45 li~GTStGgiiA~~l~ 60 (309)
T cd07216 45 LIGGTSTGGLIAIMLG 60 (309)
T ss_pred eeeeccHHHHHHHHhc
Confidence 5889999999999887
No 394
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=21.82 E-value=1.3e+02 Score=26.65 Aligned_cols=59 Identities=12% Similarity=0.103 Sum_probs=38.4
Q ss_pred ccccEEEEeeCCCCccChhhHHHHhhhcCceeEEecCCcccceeccc-----------hhhhHHHHHHHHhh
Q 020741 259 SSIKVLVLGAKDDFIVDAQGLSETGSFYGVLPVCVEGVAHDMMLDCS-----------WEKGASVILSWLDG 319 (322)
Q Consensus 259 ~~~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~-----------~~~~~~~i~~fl~~ 319 (322)
....|++..|+.|+.-...... ....+...+.+.|++|+.-+-.. +..+.+.+..||+.
T Consensus 432 ~atnVvf~NG~~DPWh~LG~~~--st~~~~~~~li~gtsHCaDMyp~~~sD~~~L~~aR~~i~~~l~~wl~~ 501 (514)
T KOG2182|consen 432 NATNVVFPNGSLDPWHALGLQN--STDSSVVSILINGTSHCADMYPARDSDSPSLKAARNRIDQNLARWLHQ 501 (514)
T ss_pred CcceEEecCCCCCchhhhcccc--CCCCCceEEEecCCccccccCCCCCCccHHHHHHHHHHHHHHHHHhhh
Confidence 3568999999999875433222 12224778899999998654221 34556667777754
No 395
>cd06143 PAN2_exo DEDDh 3'-5' exonuclease domain of the eukaryotic exoribonuclease PAN2. PAN2 is the catalytic subunit of poly(A) nuclease (PAN), a Pab1p-dependent 3'-5' exoribonuclease which plays an important role in the posttranscriptional maturation of pre-mRNAs. PAN catalyzes the deadenylation of poly(A) tails, which are initially synthesized to default lengths of 70 to 90, to mRNA-specific lengths of 55 to 71. Pab1p and PAN also play a role in the export and decay of mRNA. PAN2 contains a DEDDh-type DnaQ-like 3'-5' exonuclease domain with three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis.
Probab=21.72 E-value=1.2e+02 Score=22.64 Aligned_cols=17 Identities=18% Similarity=0.333 Sum_probs=12.5
Q ss_pred hCCCCcEEEEechhHHH
Q 020741 125 NLSLPPVLLGHSFGGLI 141 (322)
Q Consensus 125 ~~~~~~~lvG~S~Gg~~ 141 (322)
.++...+|||||+--=+
T Consensus 98 li~~~tILVGHsL~nDL 114 (174)
T cd06143 98 LVDLGCIFVGHGLAKDF 114 (174)
T ss_pred HcCCCCEEEeccchhHH
Confidence 34467799999997643
No 396
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=21.63 E-value=1.8e+02 Score=23.98 Aligned_cols=20 Identities=30% Similarity=0.487 Sum_probs=17.2
Q ss_pred CCcEEEEechhHHHHHHHHH
Q 020741 128 LPPVLLGHSFGGLIIQYYIA 147 (322)
Q Consensus 128 ~~~~lvG~S~Gg~~a~~~a~ 147 (322)
.+-++.|.|.|+.+|..++.
T Consensus 97 ~~~~i~GtSaGAi~aa~~~~ 116 (298)
T cd07206 97 LPRVISGSSAGAIVAALLGT 116 (298)
T ss_pred CCCEEEEEcHHHHHHHHHHc
Confidence 45579999999999999984
No 397
>PTZ00059 dynein light chain; Provisional
Probab=21.61 E-value=1.5e+02 Score=19.17 Aligned_cols=31 Identities=16% Similarity=0.297 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHhCCCCc-EEEEechhHHHH
Q 020741 112 QTHAGDVADFIQKNLSLPP-VLLGHSFGGLII 142 (322)
Q Consensus 112 ~~~~~dl~~~l~~~~~~~~-~lvG~S~Gg~~a 142 (322)
.+.+..|...+++..+... .+||.++|..++
T Consensus 37 kdiA~~IK~~fD~~yg~~WhciVG~~Fgs~vt 68 (90)
T PTZ00059 37 KDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVT 68 (90)
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEecCeeEEEE
Confidence 4566677777776666555 488999987664
No 398
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=21.60 E-value=98 Score=20.05 Aligned_cols=28 Identities=14% Similarity=0.247 Sum_probs=17.2
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCceE
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDC 89 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v 89 (322)
.++.||+|++...+ ...+..|.+.||.+
T Consensus 61 ~~~ivv~C~~G~rs-----~~aa~~L~~~G~~~ 88 (100)
T cd01523 61 DQEVTVICAKEGSS-----QFVAELLAERGYDV 88 (100)
T ss_pred CCeEEEEcCCCCcH-----HHHHHHHHHcCcee
Confidence 56667776653322 13466788889983
No 399
>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily. This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.
Probab=21.39 E-value=1.7e+02 Score=19.49 Aligned_cols=35 Identities=14% Similarity=0.133 Sum_probs=19.6
Q ss_pred CCCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeC
Q 020741 56 EKRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVS 93 (322)
Q Consensus 56 ~~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D 93 (322)
++.+.||++.+...... ...+..|...||.|..++
T Consensus 63 ~~~~vvvyc~~g~~~~s---~~~a~~l~~~G~~v~~l~ 97 (110)
T cd01521 63 KEKLFVVYCDGPGCNGA---TKAALKLAELGFPVKEMI 97 (110)
T ss_pred CCCeEEEEECCCCCchH---HHHHHHHHHcCCeEEEec
Confidence 35677777765421111 134556777899865543
No 400
>PLN03058 dynein light chain type 1 family protein; Provisional
Probab=21.31 E-value=1.2e+02 Score=21.32 Aligned_cols=35 Identities=14% Similarity=0.169 Sum_probs=23.7
Q ss_pred CHHHHHHHHHHHHHHhCCCCc-EEEEechhHHHHHH
Q 020741 110 SLQTHAGDVADFIQKNLSLPP-VLLGHSFGGLIIQY 144 (322)
Q Consensus 110 ~~~~~~~dl~~~l~~~~~~~~-~lvG~S~Gg~~a~~ 144 (322)
+..+.+..|...+++..+... .+||.|+|..++-.
T Consensus 67 ~ekdIA~~IKk~fDkkYG~tWHCIVGk~FGs~VTHe 102 (128)
T PLN03058 67 DSKRLALALKKEFDSAYGPAWHCIVGTSFGSYVTHS 102 (128)
T ss_pred CHHHHHHHHHHHHhhhhCCceEEEECCcEEEEEEEc
Confidence 345667777777776666554 47799999877543
No 401
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=21.24 E-value=5.5e+02 Score=22.32 Aligned_cols=75 Identities=8% Similarity=0.106 Sum_probs=40.9
Q ss_pred CCcEEEEcCCCcchhhcccc----hhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCC-CCcE
Q 020741 58 RPPLVFVHGSYHAAWCWAEH----WLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGDVADFIQK-NLS-LPPV 131 (322)
Q Consensus 58 ~~~vl~~HG~~~~~~~~~~~----~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~-~~~-~~~~ 131 (322)
+.+||+++.+ +...|..+ -...|.+.|+.|+-++ +|+=.......+.-.+.++.+..+...+.. .+. +++.
T Consensus 116 ~~pvvi~Pam--n~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g~gr~~~~~~I~~~~~~~~~~~~l~gk~vl 192 (399)
T PRK05579 116 TAPVLVAPAM--NTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVGPGRMAEPEEIVAAAERALSPKDLAGKRVL 192 (399)
T ss_pred CCCEEEEeCC--ChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcCCCCCCCHHHHHHHHHHHhhhcccCCCEEE
Confidence 4567777755 33344311 2466777898888654 343111111112235677777777777642 234 5566
Q ss_pred EEEe
Q 020741 132 LLGH 135 (322)
Q Consensus 132 lvG~ 135 (322)
+-|-
T Consensus 193 ITgG 196 (399)
T PRK05579 193 ITAG 196 (399)
T ss_pred EeCC
Confidence 6665
No 402
>PRK13529 malate dehydrogenase; Provisional
Probab=20.81 E-value=1.2e+02 Score=27.57 Aligned_cols=85 Identities=18% Similarity=0.203 Sum_probs=46.5
Q ss_pred cEEEEcCCCcchhhcccchhhHhhhCCc-------eEEEeCCCCCCCCCCCCCCCCCCHHHHHH---------------H
Q 020741 60 PLVFVHGSYHAAWCWAEHWLPFFADSGF-------DCYAVSLLGQGESDAPPGTVAGSLQTHAG---------------D 117 (322)
Q Consensus 60 ~vl~~HG~~~~~~~~~~~~~~~l~~~g~-------~v~~~D~~G~G~S~~~~~~~~~~~~~~~~---------------d 117 (322)
.-+++.|.|...-.-.+.+...+...|. +++.+|..|-=..+...- ...-..++. +
T Consensus 296 ~riv~~GAGsAgiGia~ll~~~~~~~Gl~~eeA~~~i~~vD~~GLl~~~r~~l--~~~k~~fa~~~~~~~~~~~~~~~~~ 373 (563)
T PRK13529 296 QRIVFLGAGSAGCGIADQIVAAMVREGLSEEEARKRFFMVDRQGLLTDDMPDL--LDFQKPYARKREELADWDTEGDVIS 373 (563)
T ss_pred cEEEEECCCHHHHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCcc--hHHHHHHhhhcccccccccccCCCC
Confidence 3455666654433222345555555676 899999998533333211 011111222 3
Q ss_pred HHHHHHHhCCCCcEEEEech-hHHHHHHHHHH
Q 020741 118 VADFIQKNLSLPPVLLGHSF-GGLIIQYYIAR 148 (322)
Q Consensus 118 l~~~l~~~~~~~~~lvG~S~-Gg~~a~~~a~~ 148 (322)
+.++++.. +|-+|+|-|- ||.+.-...+.
T Consensus 374 L~e~v~~~--kPtvLIG~S~~~g~Ft~evv~~ 403 (563)
T PRK13529 374 LLEVVRNV--KPTVLIGVSGQPGAFTEEIVKE 403 (563)
T ss_pred HHHHHhcc--CCCEEEEecCCCCCCCHHHHHH
Confidence 34444411 7789999998 78776666644
No 403
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=20.80 E-value=1e+02 Score=25.74 Aligned_cols=32 Identities=16% Similarity=0.286 Sum_probs=25.9
Q ss_pred CCcEEEEcCCCcchhhcccchhhHhhhCCceEEEe
Q 020741 58 RPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAV 92 (322)
Q Consensus 58 ~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~ 92 (322)
....||+-|..+.-..|. ++.|.++||.|.+-
T Consensus 5 ~~~~VcVTGAsGfIgswi---vk~LL~rGY~V~gt 36 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWI---VKLLLSRGYTVRGT 36 (327)
T ss_pred CCcEEEEeCCchHHHHHH---HHHHHhCCCEEEEE
Confidence 456899999988888764 78888899999864
No 404
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=20.73 E-value=4.3e+02 Score=21.78 Aligned_cols=35 Identities=23% Similarity=0.173 Sum_probs=21.9
Q ss_pred EEEEcCC--CcchhhcccchhhHhhhCCceEEEeCCCC
Q 020741 61 LVFVHGS--YHAAWCWAEHWLPFFADSGFDCYAVSLLG 96 (322)
Q Consensus 61 vl~~HG~--~~~~~~~~~~~~~~l~~~g~~v~~~D~~G 96 (322)
+++++|. ||..... ..+++.|.++|+.|..+...+
T Consensus 3 l~~~~~~~~gG~~~~~-~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 3 LYVITGLGLGGAEKQV-VDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred EEEecCCCCCCHHHHH-HHHHHhcccCCceEEEEEEeC
Confidence 4445554 3333333 367889988899888776543
No 405
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=20.48 E-value=87 Score=26.31 Aligned_cols=17 Identities=24% Similarity=0.317 Sum_probs=14.4
Q ss_pred EEEEechhHHHHHHHHH
Q 020741 131 VLLGHSFGGLIIQYYIA 147 (322)
Q Consensus 131 ~lvG~S~Gg~~a~~~a~ 147 (322)
.++|||+|=+.|+.++.
T Consensus 127 ~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 127 VCAGLSLGEYTALVFAG 143 (343)
T ss_pred eeeeccHHHHHHHHHhC
Confidence 57999999988888773
No 406
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=20.47 E-value=78 Score=21.66 Aligned_cols=19 Identities=26% Similarity=0.364 Sum_probs=16.9
Q ss_pred chhhHhhhCCceEEEeCCC
Q 020741 77 HWLPFFADSGFDCYAVSLL 95 (322)
Q Consensus 77 ~~~~~l~~~g~~v~~~D~~ 95 (322)
.+++.|+++||.|++.|.-
T Consensus 27 ~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 27 DVAKRLAERGFDVLATDIN 45 (129)
T ss_pred HHHHHHHHcCCcEEEEecc
Confidence 5789999999999999964
No 407
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=20.41 E-value=2.1e+02 Score=24.72 Aligned_cols=43 Identities=14% Similarity=0.200 Sum_probs=34.3
Q ss_pred CCCcEEEEcCCCcchhhcccchhhHhhhCCceEEEeCCCCCCCC
Q 020741 57 KRPPLVFVHGSYHAAWCWAEHWLPFFADSGFDCYAVSLLGQGES 100 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S 100 (322)
...+.|-+-=+|-+..+-. .+.+.|.+.||.|++|---|.|..
T Consensus 183 ~~kp~I~iTmfGvTTp~V~-~~~~~Le~~G~Ev~VFHAtG~GG~ 225 (403)
T PF06792_consen 183 EDKPLIGITMFGVTTPCVD-AIRERLEEEGYEVLVFHATGTGGR 225 (403)
T ss_pred CCCcEEEEECCCCcHHHHH-HHHHHHHhcCCeEEEEcCCCCchH
Confidence 4556777777777766665 778899999999999999999854
No 408
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=20.29 E-value=3.2e+02 Score=22.68 Aligned_cols=72 Identities=17% Similarity=0.186 Sum_probs=39.4
Q ss_pred CcEEEEcCCCcchhhcccchhhHhhhC-CceEEEeCCC----C--CCCCCCC---------------CCCCCCCHHHHHH
Q 020741 59 PPLVFVHGSYHAAWCWAEHWLPFFADS-GFDCYAVSLL----G--QGESDAP---------------PGTVAGSLQTHAG 116 (322)
Q Consensus 59 ~~vl~~HG~~~~~~~~~~~~~~~l~~~-g~~v~~~D~~----G--~G~S~~~---------------~~~~~~~~~~~~~ 116 (322)
+.+|++-|-.++... .++..|++. +..++..|-. + +|..... .....++..++.+
T Consensus 4 ~~~i~i~GptgsGKt---~la~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~f~~ 80 (307)
T PRK00091 4 PKVIVIVGPTASGKT---ALAIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVADFQR 80 (307)
T ss_pred ceEEEEECCCCcCHH---HHHHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHHHHH
Confidence 457777776555443 344555554 5567777652 1 1111110 0023477888888
Q ss_pred HHHHHHHHhCC--CCcEEE
Q 020741 117 DVADFIQKNLS--LPPVLL 133 (322)
Q Consensus 117 dl~~~l~~~~~--~~~~lv 133 (322)
+....++.... ...+|+
T Consensus 81 ~a~~~i~~i~~~gk~pIlv 99 (307)
T PRK00091 81 DALAAIADILARGKLPILV 99 (307)
T ss_pred HHHHHHHHHHhCCCCEEEE
Confidence 88888885544 334555
No 409
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=20.20 E-value=1.3e+02 Score=23.30 Aligned_cols=15 Identities=27% Similarity=0.576 Sum_probs=12.7
Q ss_pred hHhhhCCceEEEeCC
Q 020741 80 PFFADSGFDCYAVSL 94 (322)
Q Consensus 80 ~~l~~~g~~v~~~D~ 94 (322)
..|+++|+.|+++|.
T Consensus 53 ~~LA~~G~~V~avD~ 67 (218)
T PRK13255 53 LWLAEQGHEVLGVEL 67 (218)
T ss_pred HHHHhCCCeEEEEcc
Confidence 456778999999997
No 410
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=20.19 E-value=1.1e+02 Score=26.60 Aligned_cols=41 Identities=20% Similarity=0.058 Sum_probs=24.1
Q ss_pred ccEEEEeeCCCCccChhhHHHHhhhcCceeEEecCCcccceec
Q 020741 261 IKVLVLGAKDDFIVDAQGLSETGSFYGVLPVCVEGVAHDMMLD 303 (322)
Q Consensus 261 ~Pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 303 (322)
..|++..|+.|+.......... ......++++|++|+.-+.
T Consensus 377 tnviFtNG~~DPW~~lgv~~~~--~~~~~~~~I~g~~Hc~Dl~ 417 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVTSDS--SDSVPAIVIPGGAHCSDLY 417 (434)
T ss_dssp -SEEEEEETT-CCGGGS--S-S--SSSEEEEEETT--TTGGGS
T ss_pred CeEEeeCCCCCCcccccCCCCC--CCCcccEEECCCeeecccc
Confidence 5899999999998766522221 1125567899999986554
No 411
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=20.15 E-value=2.2e+02 Score=25.54 Aligned_cols=68 Identities=12% Similarity=0.093 Sum_probs=44.9
Q ss_pred CCCcEEEEcCCCcchh-hcccchhhHhhhCCceEEEeCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHhCC--CCcEE
Q 020741 57 KRPPLVFVHGSYHAAW-CWAEHWLPFFADSGFDCYAVSLLGQGESDAPPGTVAGSLQTHAGD-VADFIQKNLS--LPPVL 132 (322)
Q Consensus 57 ~~~~vl~~HG~~~~~~-~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~d-l~~~l~~~~~--~~~~l 132 (322)
..|+||++-|+.++.. .-...+...|..+||+|+++--| +-++...+ +-.+-. .++ +.+.+
T Consensus 297 ~~~vlivfeG~DaAGKgg~I~rl~~~ldPrg~~v~~~~~P--------------t~~E~~~~~lwRf~~-~lP~~G~i~i 361 (493)
T TIGR03708 297 KRSLVLVFEGWDAAGKGGAIRRVTEALDARQYRVVPIAAP--------------TDEEKAQHYLWRFWR-HIPRRGRITI 361 (493)
T ss_pred CCCEEEEEEcccCCCCcHHHHHHHhhcCCCeeEEEeCCCc--------------CHHHHcCcHHHHHHH-hCCCCCeEEE
Confidence 6789999999844332 22235667777789999998776 33444444 445555 666 77888
Q ss_pred EEechhH
Q 020741 133 LGHSFGG 139 (322)
Q Consensus 133 vG~S~Gg 139 (322)
+=-|+=+
T Consensus 362 FdRSwY~ 368 (493)
T TIGR03708 362 FDRSWYG 368 (493)
T ss_pred EcCCccC
Confidence 8777733
Done!