Query 020742
Match_columns 322
No_of_seqs 396 out of 2470
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 07:31:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020742.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020742hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a6t_A SPAC19A8.12; alpha/beta 100.0 1E-49 3.6E-54 369.0 16.3 235 15-251 9-244 (271)
2 2qkl_B SPAC19A8.12 protein, SP 100.0 9.7E-34 3.3E-38 219.2 4.7 92 15-106 4-95 (95)
3 2jvb_A Protein PSU1, mRNA-deca 99.9 4.3E-23 1.5E-27 171.5 10.7 140 105-250 2-141 (146)
4 3q1p_A Phosphohydrolase (MUTT/ 99.8 2E-20 6.9E-25 165.4 11.0 162 43-218 10-179 (205)
5 3i7u_A AP4A hydrolase; nudix p 99.8 1.5E-19 5.2E-24 149.3 12.6 103 108-217 5-112 (134)
6 3o8s_A Nudix hydrolase, ADP-ri 99.8 2.5E-19 8.7E-24 158.4 13.5 157 48-218 16-180 (206)
7 3u53_A BIS(5'-nucleosyl)-tetra 99.8 1E-18 3.6E-23 147.0 15.1 129 107-248 3-145 (155)
8 2yyh_A MUTT domain, 8-OXO-DGTP 99.8 1.9E-18 6.7E-23 142.2 15.7 109 100-215 3-119 (139)
9 2w4e_A MUTT/nudix family prote 99.8 3.4E-19 1.2E-23 148.5 11.3 118 108-228 6-131 (145)
10 3gg6_A Nudix motif 18, nucleos 99.8 3.4E-18 1.2E-22 143.4 15.1 107 108-217 21-130 (156)
11 3grn_A MUTT related protein; s 99.8 3.8E-18 1.3E-22 142.8 15.0 108 105-217 6-119 (153)
12 3fcm_A Hydrolase, nudix family 99.8 1.1E-17 3.8E-22 146.5 15.8 132 106-250 44-189 (197)
13 3o6z_A GDP-mannose pyrophospha 99.8 2.8E-18 9.7E-23 149.9 11.5 126 106-232 44-184 (191)
14 3cng_A Nudix hydrolase; struct 99.8 7.9E-18 2.7E-22 146.6 14.2 108 101-215 34-144 (189)
15 1vhz_A ADP compounds hydrolase 99.8 8.2E-18 2.8E-22 147.9 13.4 119 107-229 49-175 (198)
16 1g0s_A Hypothetical 23.7 kDa p 99.8 6E-18 2E-22 150.0 12.5 126 107-232 57-197 (209)
17 3f6a_A Hydrolase, nudix family 99.8 8.7E-18 3E-22 141.6 12.9 108 106-218 5-134 (159)
18 4dyw_A MUTT/nudix family prote 99.7 1.7E-17 5.7E-22 140.0 14.5 107 106-216 28-140 (157)
19 3h95_A Nucleoside diphosphate- 99.7 1.1E-17 3.8E-22 146.8 13.6 114 103-217 22-140 (199)
20 3gwy_A Putative CTP pyrophosph 99.7 1.4E-17 4.8E-22 137.3 13.4 106 105-217 4-116 (140)
21 2pbt_A AP4A hydrolase; nudix p 99.7 1.5E-17 5E-22 135.4 13.1 104 107-217 4-112 (134)
22 3eds_A MUTT/nudix family prote 99.7 4.6E-18 1.6E-22 142.7 10.4 110 104-218 18-136 (153)
23 2yvp_A NDX2, MUTT/nudix family 99.7 5E-18 1.7E-22 146.4 10.9 120 107-228 41-168 (182)
24 3shd_A Phosphatase NUDJ; nudix 99.7 2.1E-17 7.2E-22 138.0 14.0 125 110-251 8-137 (153)
25 1vcd_A NDX1; nudix protein, di 99.7 2.3E-17 7.9E-22 133.0 13.8 102 109-216 4-106 (126)
26 3q91_A Uridine diphosphate glu 99.7 1.1E-17 3.7E-22 149.7 12.9 137 71-221 14-194 (218)
27 3id9_A MUTT/nudix family prote 99.7 1.5E-17 5E-22 141.8 12.9 107 109-217 25-135 (171)
28 1sjy_A MUTT/nudix family prote 99.7 4E-17 1.4E-21 136.8 15.3 110 106-217 12-130 (159)
29 1ktg_A Diadenosine tetraphosph 99.7 3.6E-17 1.2E-21 133.9 14.1 108 107-217 3-118 (138)
30 3son_A Hypothetical nudix hydr 99.7 3.2E-17 1.1E-21 136.4 13.9 116 120-248 20-144 (149)
31 3r03_A Nudix hydrolase; struct 99.7 2.9E-17 9.9E-22 135.4 12.4 108 104-217 5-119 (144)
32 3fsp_A A/G-specific adenine gl 99.7 1.8E-17 6.1E-22 159.2 12.7 142 58-217 199-345 (369)
33 1v8y_A ADP-ribose pyrophosphat 99.7 1.4E-17 4.8E-22 142.2 10.6 107 106-217 33-144 (170)
34 3exq_A Nudix family hydrolase; 99.7 2.2E-17 7.5E-22 139.8 10.9 112 101-217 4-121 (161)
35 2kdv_A RNA pyrophosphohydrolas 99.7 2.9E-16 1E-20 133.6 17.8 109 107-216 8-134 (164)
36 2fkb_A Putative nudix hydrolas 99.7 1.3E-16 4.3E-21 137.1 15.5 127 108-251 38-171 (180)
37 1mk1_A ADPR pyrophosphatase; n 99.7 1.4E-17 4.8E-22 147.2 9.2 110 107-217 43-158 (207)
38 3fk9_A Mutator MUTT protein; s 99.7 3.7E-17 1.2E-21 142.5 11.6 105 107-217 4-114 (188)
39 3oga_A Nucleoside triphosphata 99.7 1.5E-16 5E-21 134.8 14.9 104 108-217 29-149 (165)
40 2azw_A MUTT/nudix family prote 99.7 2.8E-17 9.5E-22 136.0 9.9 107 106-217 17-130 (148)
41 3i9x_A MUTT/nudix family prote 99.7 8.5E-18 2.9E-22 145.9 6.9 122 95-217 12-155 (187)
42 2o1c_A DATP pyrophosphohydrola 99.7 1E-16 3.5E-21 132.5 12.9 110 103-217 6-132 (150)
43 1f3y_A Diadenosine 5',5'''-P1, 99.7 4.8E-17 1.6E-21 136.8 11.0 110 107-217 14-145 (165)
44 3ees_A Probable pyrophosphohyd 99.7 1.6E-16 5.4E-21 132.0 13.1 105 106-217 21-130 (153)
45 2rrk_A ORF135, CTP pyrophospho 99.7 1.1E-16 3.9E-21 131.1 12.0 105 106-217 8-117 (140)
46 3hhj_A Mutator MUTT protein; n 99.7 1.6E-16 5.6E-21 133.5 13.2 107 105-217 27-140 (158)
47 1rya_A GDP-mannose mannosyl hy 99.7 1.3E-16 4.6E-21 133.7 12.5 106 108-217 19-138 (160)
48 2b0v_A Nudix hydrolase; struct 99.7 1.2E-16 4.2E-21 133.0 12.0 103 111-217 12-120 (153)
49 2fb1_A Conserved hypothetical 99.7 6.6E-17 2.2E-21 145.1 10.1 116 100-218 6-129 (226)
50 1vk6_A NADH pyrophosphatase; 1 99.7 4E-16 1.4E-20 143.7 15.2 111 101-217 134-246 (269)
51 3q93_A 7,8-dihydro-8-oxoguanin 99.7 5.1E-16 1.7E-20 133.6 14.9 103 109-217 26-134 (176)
52 3f13_A Putative nudix hydrolas 99.7 4.3E-16 1.5E-20 132.8 14.0 98 106-214 15-112 (163)
53 2pqv_A MUTT/nudix family prote 99.7 2.3E-16 7.7E-21 131.9 12.0 104 109-217 21-129 (154)
54 1k2e_A Nudix homolog; nudix/MU 99.7 2.9E-16 1E-20 132.1 11.9 56 108-165 2-57 (156)
55 2fvv_A Diphosphoinositol polyp 99.7 5.6E-17 1.9E-21 142.3 7.4 105 110-216 43-149 (194)
56 2b06_A MUTT/nudix family prote 99.7 2.4E-16 8.1E-21 131.8 11.0 110 102-217 3-119 (155)
57 1mut_A MUTT, nucleoside tripho 99.7 9.4E-17 3.2E-21 129.6 7.3 102 110-217 7-113 (129)
58 1nqz_A COA pyrophosphatase (MU 99.7 2.2E-16 7.6E-21 137.5 10.1 109 108-217 35-151 (194)
59 2dsc_A ADP-sugar pyrophosphata 99.7 5.8E-16 2E-20 137.3 11.7 110 108-217 62-183 (212)
60 1q27_A Putative nudix hydrolas 99.6 2.9E-16 9.8E-21 133.7 8.9 105 107-216 34-147 (171)
61 1x51_A A/G-specific adenine DN 99.6 1.5E-15 5.3E-20 127.2 12.8 106 107-217 19-133 (155)
62 1hzt_A Isopentenyl diphosphate 99.6 1.1E-15 3.8E-20 132.7 10.5 105 108-217 33-150 (190)
63 3fjy_A Probable MUTT1 protein; 99.6 1.7E-15 5.9E-20 144.9 12.2 99 119-217 37-158 (364)
64 2fml_A MUTT/nudix family prote 99.6 4.6E-15 1.6E-19 136.8 14.4 110 103-216 35-156 (273)
65 2qjt_B Nicotinamide-nucleotide 99.6 5.7E-15 1.9E-19 139.9 14.3 114 102-217 203-329 (352)
66 3gz5_A MUTT/nudix family prote 99.6 8.4E-16 2.9E-20 139.2 7.5 106 108-216 23-138 (240)
67 2qjo_A Bifunctional NMN adenyl 99.6 4.4E-15 1.5E-19 139.8 11.4 112 103-217 199-322 (341)
68 3e57_A Uncharacterized protein 99.6 1.7E-15 5.8E-20 134.5 6.5 102 109-217 70-188 (211)
69 1u20_A U8 snoRNA-binding prote 99.5 2.5E-14 8.7E-19 126.9 6.9 101 114-217 51-165 (212)
70 1q33_A Pyrophosphatase, ADP-ri 99.5 6.7E-13 2.3E-17 123.5 14.3 97 121-217 140-262 (292)
71 2dho_A Isopentenyl-diphosphate 99.4 9E-13 3.1E-17 118.9 11.8 106 107-217 59-190 (235)
72 2pny_A Isopentenyl-diphosphate 99.4 1.1E-12 3.8E-17 119.1 11.2 106 107-217 70-201 (246)
73 2xsq_A U8 snoRNA-decapping enz 99.4 7.7E-13 2.6E-17 118.0 7.0 94 121-216 66-172 (217)
74 3qsj_A Nudix hydrolase; struct 99.3 1.7E-11 5.9E-16 110.3 12.2 108 108-216 9-187 (232)
75 3bho_A Cleavage and polyadenyl 99.2 4.4E-11 1.5E-15 104.5 10.3 67 93-160 45-112 (208)
76 3dup_A MUTT/nudix family prote 99.2 2.8E-10 9.7E-15 105.9 12.9 107 109-217 120-242 (300)
77 3rh7_A Hypothetical oxidoreduc 99.1 1.3E-10 4.3E-15 109.4 9.7 115 108-254 184-300 (321)
78 3kvh_A Protein syndesmos; NUDT 98.8 2.1E-09 7.2E-14 93.0 5.1 94 122-216 46-148 (214)
79 3gcg_B MAP, L0028 (mitochondri 23.0 46 0.0016 27.7 2.5 39 22-63 59-97 (172)
No 1
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=100.00 E-value=1e-49 Score=369.02 Aligned_cols=235 Identities=47% Similarity=0.836 Sum_probs=192.1
Q ss_pred CCCCchhHHHhhhhhhhccCChhhhhchHHHHHHHhhhheeeeeCCccCCCCCCcchHHHHHHHHhCCCCcccccccchh
Q 020742 15 GGLPPQELLDDLCSRFVLNVPQEDQQSFERILFLVEYAHWFYEDNSVENNPSLKSFTLKEFTSLMFNSCDVLRPYVAHID 94 (322)
Q Consensus 15 ~~~~~~~~l~dl~~Rfi~n~p~~~~~~~~rl~f~ie~a~w~y~d~~~~~~p~l~~~~l~~f~~~l~~~~~~l~~~~~~~~ 94 (322)
...+++++|||||+|||+|+|++|+++++|||||||+|||||+||++..+|.+|.+.++.|+..+|++|+.+.++....+
T Consensus 9 ~~~~~~~~l~dl~~rfi~n~p~~~~~~~~~~~f~ie~a~wfy~d~~~~~~~~~p~~~~~~f~~~~f~~~~~l~~~~~~~~ 88 (271)
T 2a6t_A 9 TNATFSQVLDDLSARFILNLPAEEQSSVERLCFQIEQAHWFYEDFIRAQNDQLPSLGLRVFSAKLFAHCPLLWKWSKVHE 88 (271)
T ss_dssp SCCCTHHHHHHHHHHHTTTSCGGGTTCHHHHHHHHHHHHHHHHHTHHHHCSSSCCCCHHHHHHHHHTTCHHHHHC---CC
T ss_pred CCCCHHHHHHHHHHHHhhcCCHHHhccHHHHHHHHHHHHHHHHHhhhhcccCCCcccHHHHHHHHhhhhhhhhcccccch
Confidence 44789999999999999999999999999999999999999999999999999999999999999999999888888778
Q ss_pred HHHhhhcCCcccccEEEEEEEeCCCCEEEEEEeeC-CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeee
Q 020742 95 DIFKDFTSYKVRVPVTGAIILDETYERCILVKGWK-GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE 173 (322)
Q Consensus 95 ~~~~~~~~y~~~v~v~g~Iv~~~~~~kvLLvrr~~-~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~ 173 (322)
+.+..|+.|+++++++++||++++.++|||+++++ ++.|+||||++++||++.+||+||++||||+++..+..+..+..
T Consensus 89 ~~~~~~~~~~~~v~~v~avv~~~~~~~vLLv~r~~~~g~W~lPgG~ve~gEs~~eAA~REl~EEtGl~~~~l~~~~~~~~ 168 (271)
T 2a6t_A 89 EAFDDFLRYKTRIPVRGAIMLDMSMQQCVLVKGWKASSGWGFPKGKIDKDESDVDCAIREVYEETGFDCSSRINPNEFID 168 (271)
T ss_dssp HHHHHHHHHSCCCCEEEEEEBCSSSSEEEEEEESSTTCCCBCSEEECCTTCCHHHHHHHHHHHHHCCCCTTTCCTTCEEE
T ss_pred hHHHHHHhcCCCCCeEEEEEEECCCCEEEEEEEeCCCCeEECCcccCCCCcCHHHHHHHHHHHHhCCCceeeeeeeeecc
Confidence 99999999999999999999987546999999977 78999999999999999999999999999999988665544444
Q ss_pred cccCeEEEEEEEEEeecCCCCCCCCCccceeeEEEEecccccccCCCccchhhhhhhhhhhhhhHHHHHHHHHhcCCC
Q 020742 174 KIFGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPASDDVISHGVTGLKLYMVAPFLASLKKWISAHKPS 251 (322)
Q Consensus 174 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~~~~~~~~~~~~~~~~~v~pf~~~L~~wi~~~~~~ 251 (322)
....+..+++|++........+.+.+.+|+.++.|+++++++++.... ....+..++++.|++.+|++|+..++.+
T Consensus 169 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~--~~~~~~~~~~~~p~~~~L~~wl~~~~~~ 244 (271)
T 2a6t_A 169 MTIRGQNVRLYIIPGISLDTRFESRTRKEISKIEWHNLMDLPTFKKNK--PQTMKNKFYMVIPFLAPLKKWIKKRNIA 244 (271)
T ss_dssp EEETTEEEEEEEECCCCTTCCCC------EEEEEEEEGGGSTTCC--------CCGGGTTTGGGHHHHHHHHHHHHHH
T ss_pred CCcCCceEEEEEEEEecCcccCCCCCccceeEEEEEEHHHHHHHHhcC--ccccccchhhhhHHHHHHHHHHHhcCcc
Confidence 444456677787765544333344467899999999999998853221 1113456789999999999999977654
No 2
>2qkl_B SPAC19A8.12 protein, SPBC3B9.21 protein; protein-protein complex, hydrolase; 2.33A {Schizosaccharomyces pombe} SCOP: a.242.1.1
Probab=99.98 E-value=9.7e-34 Score=219.21 Aligned_cols=92 Identities=40% Similarity=0.731 Sum_probs=85.9
Q ss_pred CCCCchhHHHhhhhhhhccCChhhhhchHHHHHHHhhhheeeeeCCccCCCCCCcchHHHHHHHHhCCCCcccccccchh
Q 020742 15 GGLPPQELLDDLCSRFVLNVPQEDQQSFERILFLVEYAHWFYEDNSVENNPSLKSFTLKEFTSLMFNSCDVLRPYVAHID 94 (322)
Q Consensus 15 ~~~~~~~~l~dl~~Rfi~n~p~~~~~~~~rl~f~ie~a~w~y~d~~~~~~p~l~~~~l~~f~~~l~~~~~~l~~~~~~~~ 94 (322)
++.++++||||||+|||+|+|++|+++++|||||||+|||||+||++++||.||++++++|+..++++|+.++++..+++
T Consensus 4 ~~~~~~~iLdDL~~RFIiN~P~eel~s~eRl~FqiEeA~WfY~Df~~~~np~Lp~~~lk~F~~~if~~cp~L~~~~~~~~ 83 (95)
T 2qkl_B 4 TNATFSQVLDDLSARFILNLPAEEQSSVERLCFQIEQAHWFYEDFIRAQNDQLPSLGLRVFSAKLFAHCPLLWKWSKVHE 83 (95)
T ss_dssp TTCCHHHHHHHHHHHHTTTCCGGGSSCHHHHHHHHHHHHHHHHHTTTTTCTTSCCCCHHHHHHHHHHHCTHHHHHHTCCH
T ss_pred CcCCHHHHHHHHHHHHHHcCCHHHhhhHHHHHHHHHhheeehcccccccCCCCCCCcHHHHHHHHHHhCHHHHhccccHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCccc
Q 020742 95 DIFKDFTSYKVR 106 (322)
Q Consensus 95 ~~~~~~~~y~~~ 106 (322)
+++++|++||++
T Consensus 84 ~~~~~F~~YK~~ 95 (95)
T 2qkl_B 84 EAFDDFLRYKTR 95 (95)
T ss_dssp HHHHHHHC----
T ss_pred HHHHHHHHhccC
Confidence 999999999974
No 3
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.89 E-value=4.3e-23 Score=171.49 Aligned_cols=140 Identities=34% Similarity=0.752 Sum_probs=105.7
Q ss_pred ccccEEEEEEEeCCCCEEEEEEeeCCCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeeecccCeEEEEEE
Q 020742 105 VRVPVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEKIFGQQRVRLY 184 (322)
Q Consensus 105 ~~v~v~g~Iv~~~~~~kvLLvrr~~~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~~~~~~~~~~~y 184 (322)
+.+++++++|++++.++|||+++...|.|.||||+++.||++.+||+||++||||+++..+..+..+..........++|
T Consensus 2 ~~i~~~~~~i~~~~~~~vLl~~r~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~ 81 (146)
T 2jvb_A 2 KSIPVRGAAIFNENLSKILLVQGTESDSWSFPRGKISKDENDIDCCIREVKEEIGFDLTDYIDDNQFIERNIQGKNYKIF 81 (146)
T ss_dssp CCSCCEEEEEBCTTSSEEEEECCSSSSCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCSSSSCSSCEEEEEETTEEEEEE
T ss_pred ceeEEEEEEEEeCCCCEEEEEEEcCCCcEECCcccCCCCCCHHHHHHHHHHHHHCCCchHhcccccccccccCCceEEEE
Confidence 46778889998876459999998778999999999999999999999999999999988765555444333334455666
Q ss_pred EEEeecCCCCCCCCCccceeeEEEEecccccccCCCccchhhhhhhhhhhhhhHHHHHHHHHhcCC
Q 020742 185 IIAGVRDDTAFAPQTKKEISEIAWQRLDELQPASDDVISHGVTGLKLYMVAPFLASLKKWISAHKP 250 (322)
Q Consensus 185 ~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~~~~~~~~~~~~~~~~~v~pf~~~L~~wi~~~~~ 250 (322)
++..........+...+|+.++.|++++++..+... ....++++.|++..++.|+.+++.
T Consensus 82 ~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~------~~~~~~l~~~~~~~l~~~~~~~~~ 141 (146)
T 2jvb_A 82 LISGVSEVFNFKPQVRNEIDKIEWFDFKKISKTMYK------SNIKYYLINSMMRPLSMWLRHQRQ 141 (146)
T ss_dssp EECCCCSSSCCCCCCSSSCCCEEEEEHHHHHTGGGC------SSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccccccCCcCCcchhheeEEeEHHHHHhhhcc------cchhhhhHHHHHHHHHHHHHHhhC
Confidence 665444333334445788999999999999884211 112456788999999999987654
No 4
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.83 E-value=2e-20 Score=165.41 Aligned_cols=162 Identities=20% Similarity=0.267 Sum_probs=116.7
Q ss_pred HHHHHHHhhhheeee-eC-CccCCCCCCcchHHHHHHHHhCCCCcccccccchhHHHhhhcCCcccccEEEEEEEeCCCC
Q 020742 43 ERILFLVEYAHWFYE-DN-SVENNPSLKSFTLKEFTSLMFNSCDVLRPYVAHIDDIFKDFTSYKVRVPVTGAIILDETYE 120 (322)
Q Consensus 43 ~rl~f~ie~a~w~y~-d~-~~~~~p~l~~~~l~~f~~~l~~~~~~l~~~~~~~~~~~~~~~~y~~~v~v~g~Iv~~~~~~ 120 (322)
.||. +|-|+..+|. |. .++++ ..+++++..+...+.... ...+++.+.....|.+...+++++|+++ +
T Consensus 10 ~~~~-~~a~~g~~y~~~~~d~er~-----~~l~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~v~~vv~~~--~ 79 (205)
T 3q1p_A 10 KQIQ-SIAQAGLTYSKDVYDIERF-----QQLRDISISMMSHYTKTD--WEVVEKLFASETGYQTPKVDIRAVVFQN--E 79 (205)
T ss_dssp HHHH-HHHHHHHHHCCCHHHHHHH-----HHHHHHHHHHHHHHTTCC--HHHHHHHHSCCCSSCCCEEEEEEEEEET--T
T ss_pred HHHH-HHHHhhhccCCCCccHHHH-----HHHHHHHHHHHHhcccCC--HHHHHHHHccccCCCCCcceEEEEEEEC--C
Confidence 4444 7888989986 43 34443 678999988887666443 2457788888889999888888888885 3
Q ss_pred EEEEEEeeCCCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeee-----cccCeEEEE-EEEEEeecCCCC
Q 020742 121 RCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-----KIFGQQRVR-LYIIAGVRDDTA 194 (322)
Q Consensus 121 kvLLvrr~~~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~-----~~~~~~~~~-~y~~~~~~~~~~ 194 (322)
+|||+++...|.|+||||+++.||++.+||+||++||||+++.....+..+.. .....+.+. +|.+....+.
T Consensus 80 ~vLLv~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 157 (205)
T 3q1p_A 80 KLLFVKEKSDGKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHFKLLAIFDKEKHQPSPSATHVYKIFIGCEIIGGE-- 157 (205)
T ss_dssp EEEEEEC---CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEHHHHSCCCCSSCEEEEEEEEEEEEEC--
T ss_pred EEEEEEEcCCCcEECCcCccCCCCCHHHHHHHHHHHHHCCccccceEEEEEeccccCCCCCCceEEEEEEEEEecCCc--
Confidence 99999998788999999999999999999999999999999886544433321 122233444 4444333332
Q ss_pred CCCCCccceeeEEEEecccccccC
Q 020742 195 FAPQTKKEISEIAWQRLDELQPAS 218 (322)
Q Consensus 195 ~~~~~~~Ei~~~~Wv~ldeL~~~~ 218 (322)
+....|+.++.|+++++|+.+.
T Consensus 158 --~~~~~E~~~~~w~~~~el~~l~ 179 (205)
T 3q1p_A 158 --KKTSIETEEVEFFGENELPNLS 179 (205)
T ss_dssp --CCCCTTSCCEEEECTTSCCCBC
T ss_pred --cCCCCcceEEEEEeHHHhhhcC
Confidence 2334889999999999998853
No 5
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.81 E-value=1.5e-19 Score=149.25 Aligned_cols=103 Identities=24% Similarity=0.428 Sum_probs=75.5
Q ss_pred cEEEEEEEeCCCCEEEEEEeeCCCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeee--eeecccC---eEEEE
Q 020742 108 PVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDE--FIEKIFG---QQRVR 182 (322)
Q Consensus 108 ~v~g~Iv~~~~~~kvLLvrr~~~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~--~~~~~~~---~~~~~ 182 (322)
.++|+||++++ +|||+++. .|.|+||||++++|||+.+||+||++||||+++.....+.. +.....+ ...++
T Consensus 5 ~aag~vv~~~~--~vLL~~r~-~g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~ 81 (134)
T 3i7u_A 5 FSAGGVLFKDG--EVLLIKTP-SNVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIHYWYTLKGERIFKTVK 81 (134)
T ss_dssp EEEEEEEEETT--EEEEEECT-TSCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEEECC--EEEEEEeC-CCcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEeeeeeeeeEEecCCCceEEEEEE
Confidence 36788888764 99999975 58899999999999999999999999999999876544432 2111111 22344
Q ss_pred EEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 183 LYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 183 ~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
+|.+....+. +...+|+.+++|+++++++++
T Consensus 82 ~f~~~~~~~~----~~~~~E~~~~~W~~~~e~~~~ 112 (134)
T 3i7u_A 82 YYLMKYKEGE----PRPSWEVKDAKFFPIKEAKKL 112 (134)
T ss_dssp EEEEEEEEEC----CCCCTTSSEEEEEEHHHHHHH
T ss_pred EEEEEEcCCc----CcCChhheEEEEEEHHHHhhh
Confidence 5655544433 333578999999999999873
No 6
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.80 E-value=2.5e-19 Score=158.42 Aligned_cols=157 Identities=20% Similarity=0.257 Sum_probs=78.2
Q ss_pred HHhhhheeee-eC-CccCCCCCCcchHHHHHHHHhCCCCcccccccchhHHHhhhcCCcccccEEEEEEEeCCCCEEEEE
Q 020742 48 LVEYAHWFYE-DN-SVENNPSLKSFTLKEFTSLMFNSCDVLRPYVAHIDDIFKDFTSYKVRVPVTGAIILDETYERCILV 125 (322)
Q Consensus 48 ~ie~a~w~y~-d~-~~~~~p~l~~~~l~~f~~~l~~~~~~l~~~~~~~~~~~~~~~~y~~~v~v~g~Iv~~~~~~kvLLv 125 (322)
+|-|+.++|. |. .+++ ...+++++..+........ ...++..+.....|.+...+++++|+++ ++|||+
T Consensus 16 ~~a~~gl~~~~~~~d~er-----~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~y~~~~~~v~~vv~~~--~~vLLv 86 (206)
T 3o8s_A 16 ALAQTGLAYGKDVYDMER-----FEEIRQIAAEMLVEPSGQP--LEVVKDLFCNETGYQTPKLDTRAAIFQE--DKILLV 86 (206)
T ss_dssp -----------------------------------------------------------CCEEEEEEEEEET--TEEEEE
T ss_pred HHHHhhhccCCCchhHHH-----HHHHHHHHHHHHHhccCCC--HHHHHHHhccccCCCCCCccEEEEEEEC--CEEEEE
Confidence 7888999996 33 3344 3667778887776655432 2446777888888988777777888876 399999
Q ss_pred EeeCCCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeee-----cccCeEEE-EEEEEEeecCCCCCCCCC
Q 020742 126 KGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-----KIFGQQRV-RLYIIAGVRDDTAFAPQT 199 (322)
Q Consensus 126 rr~~~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~-----~~~~~~~~-~~y~~~~~~~~~~~~~~~ 199 (322)
++. .+.|+||||+++.||++.+||+||++||||+++.....+..+.. .....+.+ .+|.+....+. +..
T Consensus 87 rr~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 161 (206)
T 3o8s_A 87 QEN-DGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQRVVAILDKHKNNPAKSAHRVTKVFILCRLLGGE----FQP 161 (206)
T ss_dssp ECT-TSCEECSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEEEHHHHCC-----CEEEEEEEEEEEEEC----CCC
T ss_pred Eec-CCeEECCeeccCCCCCHHHHHHHHHHHHHCCcceeeeEEEEEeccccCCCCCCceEEEEEEEEEecCCe----ecC
Confidence 988 89999999999999999999999999999999876544443321 11122333 34444333332 223
Q ss_pred ccceeeEEEEecccccccC
Q 020742 200 KKEISEIAWQRLDELQPAS 218 (322)
Q Consensus 200 ~~Ei~~~~Wv~ldeL~~~~ 218 (322)
..|+.++.|+++++|+.+.
T Consensus 162 ~~E~~~~~w~~~~el~~l~ 180 (206)
T 3o8s_A 162 NSETVASGFFSLDDLPPLY 180 (206)
T ss_dssp CSSCSEEEEECTTSCCCBC
T ss_pred CCCceEEEEEeHHHhhhcc
Confidence 4788999999999999863
No 7
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.80 E-value=1e-18 Score=146.98 Aligned_cols=129 Identities=19% Similarity=0.284 Sum_probs=86.6
Q ss_pred ccEEEEEEEe--------CCCCEEEEEEeeC-CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeee----e
Q 020742 107 VPVTGAIILD--------ETYERCILVKGWK-GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFI----E 173 (322)
Q Consensus 107 v~v~g~Iv~~--------~~~~kvLLvrr~~-~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~----~ 173 (322)
+.+||+||+. .+..++||+++.. .+.|.||||++++|||+.+||+||++||||+++.....+..+. .
T Consensus 3 ~ra~G~iifr~~~~~~~~n~~~e~LL~~r~~~~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~ 82 (155)
T 3u53_A 3 LRACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNY 82 (155)
T ss_dssp -CEEEEEEEEECCCSSSSSCSEEEEEEEESSSSCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEE
T ss_pred ceEeEEEEEccccccceeCCCcEEEEEEecCCCCCEECCeeeccCCCCHHHHHHHHHHHHHCCccccceeeeeEeeeeec
Confidence 5678999873 3345999999876 6889999999999999999999999999999988654433221 1
Q ss_pred cc-cCeEEEEEEEEEeecCCCCCCCCCccceeeEEEEecccccccCCCccchhhhhhhhhhhhhhHHHHHHHHHhc
Q 020742 174 KI-FGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPASDDVISHGVTGLKLYMVAPFLASLKKWISAH 248 (322)
Q Consensus 174 ~~-~~~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~~~~~~~~~~~~~~~~~v~pf~~~L~~wi~~~ 248 (322)
.. .......+|++....... .+...+|+.+++|++++++.++.. +-.....+....++|...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~E~~~~~W~~~~ea~~~~~-----------~~~~~~~L~~a~~~L~~~ 145 (155)
T 3u53_A 83 VARNKPKTVIYWLAEVKDYDV--EIRLSHEHQAYRWLGLEEACQLAQ-----------FKEMKAALQEGHQFLCSI 145 (155)
T ss_dssp EETTEEEEEEEEEEEESCTTC--CCCCCTTEEEEEEECHHHHHHHHC-----------SHHHHHHHHHHHHHHHHH
T ss_pred CCCcceeEEEEEEEEEeccCC--ccCCCcceeEEEEeEHHHHHHHcC-----------CHHHHHHHHHHHHHHhCc
Confidence 11 222334445554443332 233457899999999999876311 112234455666666654
No 8
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.79 E-value=1.9e-18 Score=142.17 Aligned_cols=109 Identities=20% Similarity=0.248 Sum_probs=81.3
Q ss_pred hcCCcccccEEEEEEEe--CCCCE--EEEEEeeC-CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeeec
Q 020742 100 FTSYKVRVPVTGAIILD--ETYER--CILVKGWK-GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEK 174 (322)
Q Consensus 100 ~~~y~~~v~v~g~Iv~~--~~~~k--vLLvrr~~-~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~~ 174 (322)
|. |+....++++||++ ++ ++ +||++|.+ ++.|+||||+++.||++.+||+||++||||+++.....+..+...
T Consensus 3 ~~-y~~p~~~v~~vi~~~~~~-~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~ 80 (139)
T 2yyh_A 3 FN-VKTPLLATDVIIRLWDGE-NFKGIVLIERKYPPVGLALPGGFVEVGERVEEAAAREMREETGLEVRLHKLMGVYSDP 80 (139)
T ss_dssp CC-CCCCEEEEEEEEEEEETT-EEEEEEEEEECSSSCSEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEEEEEECCT
T ss_pred cc-ccCCeEEEEEEEEEEcCC-CcEEEEEEEecCCCCcEECccccCCCCCCHHHHHHHHHHHHHCCCcccceEEEEECCC
Confidence 45 77777778888876 44 37 99999876 456999999999999999999999999999998765444443322
Q ss_pred c---cCeEEEEEEEEEeecCCCCCCCCCccceeeEEEEeccccc
Q 020742 175 I---FGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQ 215 (322)
Q Consensus 175 ~---~~~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~ 215 (322)
. ..+....+|.+.. .+. +...+|+.++.|+++++++
T Consensus 81 ~~~~~~~~~~~~f~~~~-~~~----~~~~~e~~~~~W~~~~el~ 119 (139)
T 2yyh_A 81 ERDPRAHVVSVVWIGDA-QGE----PKAGSDAKKVKVYRLEEIP 119 (139)
T ss_dssp TSCTTSCEEEEEEEEEE-ESC----CCCCTTEEEEEEECTTSCC
T ss_pred CcCCCceEEEEEEEEec-CCc----cCCCCCcceEEEEEHHHCC
Confidence 1 1234556666654 332 2346788999999999998
No 9
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.79 E-value=3.4e-19 Score=148.47 Aligned_cols=118 Identities=18% Similarity=0.135 Sum_probs=81.4
Q ss_pred cEEEEEEEeCCCCEEEEEEeeC----CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeee-cccCeEEEE
Q 020742 108 PVTGAIILDETYERCILVKGWK----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIFGQQRVR 182 (322)
Q Consensus 108 ~v~g~Iv~~~~~~kvLLvrr~~----~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~-~~~~~~~~~ 182 (322)
.++++++++.++ ++||+++++ .+.|+||||++++||++.+||+||++||||+++..+..+..+.. .......++
T Consensus 6 ~~v~vi~~~~~~-~vLLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~ 84 (145)
T 2w4e_A 6 RAVFILPVTAQG-EAVLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGGAASEWVPLPGFYPQPSISGVVFY 84 (145)
T ss_dssp EEEEEEEEETTS-EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECSEEEECCCBBSCTTTCCCEEE
T ss_pred CEEEEEEEcCCC-EEEEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccCeEEEEecCcCCCCccCceEE
Confidence 467778887764 899998765 24899999999999999999999999999999887666555432 233345677
Q ss_pred EEEEEeecCCCCCCCCCccceeeEEEEeccccccc--CCCcc-chhhhh
Q 020742 183 LYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA--SDDVI-SHGVTG 228 (322)
Q Consensus 183 ~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~--~~~~~-~~~~~~ 228 (322)
+|++...... . ...+.+|+.++.|++++++.++ .+.+. +.++.+
T Consensus 85 ~f~~~~~~~~-~-~~~~~~E~~~~~w~~~~el~~~~~~~~~~~~~~~~a 131 (145)
T 2w4e_A 85 PLLALGVTLG-A-AQLEDTETIERVVLPLAEVYRMLEAGEIQDGPSSLT 131 (145)
T ss_dssp EEEEEEEEEC----------CEEEEEEEHHHHHHHHHHTCCCBHHHHHH
T ss_pred EEEEEecccC-C-CCCCCCCeEEEEEEeHHHHHHHHHcCCcCcHHHHHH
Confidence 7777644322 1 1235678899999999999874 33343 444443
No 10
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.78 E-value=3.4e-18 Score=143.43 Aligned_cols=107 Identities=20% Similarity=0.202 Sum_probs=80.3
Q ss_pred cEEEEEEEeCCCCEEEEEEeeC---CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeeecccCeEEEEEE
Q 020742 108 PVTGAIILDETYERCILVKGWK---GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEKIFGQQRVRLY 184 (322)
Q Consensus 108 ~v~g~Iv~~~~~~kvLLvrr~~---~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~~~~~~~~~~~y 184 (322)
.++++++++++ ++|||+++.+ .+.|+||||+++.||++.+||+||++||||+++.....+..+.. .......+|
T Consensus 21 ~~v~~~i~~~~-~~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~--~~~~~~~~f 97 (156)
T 3gg6_A 21 YVVLAVFLSEQ-DEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLSVEER--GPSWVRFVF 97 (156)
T ss_dssp EEEEEECBCTT-SEEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEEEEEEES--STTEEEEEE
T ss_pred EEEEEEEEeCC-CEEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhhCceeEeeeEEEEEcC--CCCEEEEEE
Confidence 45566667766 4999999987 68999999999999999999999999999999887655554432 223455566
Q ss_pred EEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 185 IIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 185 ~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
.+....+.......+.+|+.++.|+++++++++
T Consensus 98 ~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 130 (156)
T 3gg6_A 98 LARPTGGILKTSKEADAESLQAAWYPRTSLPTP 130 (156)
T ss_dssp EEEEEEECCCCGGGCSSSCSEEEEEETTSCCSS
T ss_pred EEEeeCCeeccCCCCCcceeeeEEEcHHHCccc
Confidence 665544432222234578999999999999874
No 11
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.78 E-value=3.8e-18 Score=142.83 Aligned_cols=108 Identities=22% Similarity=0.210 Sum_probs=80.7
Q ss_pred ccccEEEEEEEeCCCCEEEEEEeeC-----CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeee-cccCe
Q 020742 105 VRVPVTGAIILDETYERCILVKGWK-----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIFGQ 178 (322)
Q Consensus 105 ~~v~v~g~Iv~~~~~~kvLLvrr~~-----~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~-~~~~~ 178 (322)
+...++++||++.+ ++|||++|.. +|.|.||||+++.||++.+||+||++||||+.+.....+..+.. .....
T Consensus 6 ~~~~~v~~vi~~~~-~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~~~~~~~~~~~ 84 (153)
T 3grn_A 6 PYIISVYALIRNEK-GEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPGDIAGQVNFELTEKK 84 (153)
T ss_dssp CEEEEEEEEEECTT-CCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCSEEEEEEEECSSCE
T ss_pred ceEEEEEEEEEcCC-CcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcEeecceEEEEEEEecCCce
Confidence 34456677788766 4899999875 48999999999999999999999999999999886544444322 22334
Q ss_pred EEEEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 179 QRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 179 ~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
....+|.+....+. +....|+.++.|++++++.++
T Consensus 85 ~~~~~~~~~~~~~~----~~~~~e~~~~~W~~~~el~~~ 119 (153)
T 3grn_A 85 VIAIVFDGGYVVAD----VKLSYEHIEYSWVSLEKILGM 119 (153)
T ss_dssp EEEEEEEEEECCCC----CCCCTTEEEEEEECHHHHTTC
T ss_pred EEEEEEEEEecCCc----EecCCCcceEEEEEHHHhhhc
Confidence 45566666554443 223478899999999999884
No 12
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.76 E-value=1.1e-17 Score=146.47 Aligned_cols=132 Identities=17% Similarity=0.320 Sum_probs=82.4
Q ss_pred cccEEEEEEEeCCCCEEEEEEeeCCCcEEcccccCCCCCCHHHHHHHHHHHHhCCc-ccce----eeeeeeeecc-----
Q 020742 106 RVPVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFD-VSKL----LNKDEFIEKI----- 175 (322)
Q Consensus 106 ~v~v~g~Iv~~~~~~kvLLvrr~~~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~-v~~l----~~~~~~~~~~----- 175 (322)
...+++++|++.++++|||+++...|.|.||||+++.||++.+||+||++||||++ +..+ ..+..+....
T Consensus 44 ~h~~~~~vv~~~~~~~vLL~~r~~~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (197)
T 3fcm_A 44 AHLTSSAFAVNKERNKFLMIHHNIYNSWAWTGGHSDNEKDQLKVAIKELKEETGVKNPTPLLDKAFALDVLTVNGHIKRG 123 (197)
T ss_dssp EEEEEEEEEECTTSCEEEEEEETTTTEEECEEEECTTCCBHHHHHHHHHHHHHCCSSCEESCSSCSEEEEEEECCEEETT
T ss_pred ccEEEEEEEEECCCCEEEEEEecCCCCEECCccccCCCCCHHHHHHHHHHHHHCCCcccccCCCceEEEEeeecCccccC
Confidence 34567888888776699999988889999999999999999999999999999998 4321 1111111110
Q ss_pred ---cCe-EEEEEEEEEeecCCCCCCCCCccceeeEEEEecccccccCCCccchhhhhhhhhhhhhhHHHHHHHHHhcCC
Q 020742 176 ---FGQ-QRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPASDDVISHGVTGLKLYMVAPFLASLKKWISAHKP 250 (322)
Q Consensus 176 ---~~~-~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~~~~~~~~~~~~~~~~~v~pf~~~L~~wi~~~~~ 250 (322)
..+ +....|++. ....... ..+.+|+.++.|+++++++++.... ...+.+..+.++|.++..
T Consensus 124 ~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~E~~~~~W~~~~el~~~~~~~-----------~~~~il~~~~~~l~~~~~ 189 (197)
T 3fcm_A 124 KYVSSHLHLNLTYLIE-CSEDETL-MLKEDENSGVMWIPFNEISKYCSEP-----------HMIPIYEKLINKLKTQSK 189 (197)
T ss_dssp EEECCEEEEEEEEEEE-CCTTSCC-CCCC----CEEEEEGGGHHHHCCCG-----------GGHHHHHHHHHHHHC---
T ss_pred cccCCceeEEEEEEEE-eCCCccc-CCCcccccceEEccHHHHHhhcCCH-----------HHHHHHHHHHHHHHhccc
Confidence 011 122344443 3332222 2346889999999999998753211 223566777777776543
No 13
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.76 E-value=2.8e-18 Score=149.91 Aligned_cols=126 Identities=15% Similarity=0.196 Sum_probs=90.7
Q ss_pred cccEEEEEEEeCCCCEEEEEEeeC----------CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeee-c
Q 020742 106 RVPVTGAIILDETYERCILVKGWK----------GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-K 174 (322)
Q Consensus 106 ~v~v~g~Iv~~~~~~kvLLvrr~~----------~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~-~ 174 (322)
+..++++++++.+.+++||+++++ .+.|+||||+++ ||++.+||+||++||||+++..+..+..+.. .
T Consensus 44 ~~~av~v~~~~~~~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~~~~~l~~~~~~~ 122 (191)
T 3o6z_A 44 RGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVGEVRKLFELYMSP 122 (191)
T ss_dssp CCCEEEEEEEETTTTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCSCEEEEEEEESCT
T ss_pred cCCEEEEEEEECCCCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccCcEEEEEEEEeCC
Confidence 446778888886546999999874 467999999999 9999999999999999999987777766543 3
Q ss_pred ccCeEEEEEEEEEeecCCCC-CCCCCccceeeEEEEeccccccc--CCCcc-chhhhhhhhh
Q 020742 175 IFGQQRVRLYIIAGVRDDTA-FAPQTKKEISEIAWQRLDELQPA--SDDVI-SHGVTGLKLY 232 (322)
Q Consensus 175 ~~~~~~~~~y~~~~~~~~~~-~~~~~~~Ei~~~~Wv~ldeL~~~--~~~~~-~~~~~~~~~~ 232 (322)
......+++|++........ ......+|+.++.|++++++.++ .+++. ++++.++.++
T Consensus 123 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~g~i~d~~t~~al~~~ 184 (191)
T 3o6z_A 123 GGVTELIHFFIAEYSDNQRANAGGGVEDEAIEVLELPFSQALEMIKTGEIRDGKTVLLLNYL 184 (191)
T ss_dssp TTBCCEEEEEEEECCTTCC--------CCSSEEEEEEHHHHHHHHHHSSCCBHHHHHHHHHH
T ss_pred CccCcEEEEEEEEEcccccccCCCCCCCcEEEEEEEEHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 34556778888765432111 00112678899999999999884 55565 6666665444
No 14
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.76 E-value=7.9e-18 Score=146.59 Aligned_cols=108 Identities=20% Similarity=0.120 Sum_probs=81.0
Q ss_pred cCCcccccEEEEEEEeCCCCEEEEEEeeC---CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeeecccC
Q 020742 101 TSYKVRVPVTGAIILDETYERCILVKGWK---GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEKIFG 177 (322)
Q Consensus 101 ~~y~~~v~v~g~Iv~~~~~~kvLLvrr~~---~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~~~~~ 177 (322)
..|.....++++|+.++ ++|||+++.+ .+.|.||||+++.||++.+||+||++||||+++.....+..+ .....
T Consensus 34 ~~~~~~~~~v~~ii~~~--~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~-~~~~~ 110 (189)
T 3cng_A 34 IHYQNPKVIVGCIPEWE--NKVLLCKRAIAPYRGKWTLPAGFMENNETLVQGAARETLEEANARVEIRELYAVY-SLPHI 110 (189)
T ss_dssp EECCCCEEEEEEEEEET--TEEEEEEESSSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEE-EEGGG
T ss_pred ccCCCCceEEEEEEEeC--CEEEEEEccCCCCCCeEECceeeccCCCCHHHHHHHHHHHHHCCccccceeEEEE-ecCCC
Confidence 44555566777788874 3999999976 689999999999999999999999999999998754333322 22233
Q ss_pred eEEEEEEEEEeecCCCCCCCCCccceeeEEEEeccccc
Q 020742 178 QQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQ 215 (322)
Q Consensus 178 ~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~ 215 (322)
+....+|.+...... +...+|+.++.|+++++++
T Consensus 111 ~~~~~~f~~~~~~~~----~~~~~E~~~~~W~~~~el~ 144 (189)
T 3cng_A 111 SQVYMLFRAKLLDLD----FFPGIESLEVRLFGEQEIP 144 (189)
T ss_dssp TEEEEEEEEEECCSC----CCCCTTEEEEEEECTTTCC
T ss_pred cEEEEEEEEEeCCCc----cCCCccceeEEEECHHHcC
Confidence 456667777554332 2236789999999999998
No 15
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.75 E-value=8.2e-18 Score=147.93 Aligned_cols=119 Identities=15% Similarity=0.202 Sum_probs=89.1
Q ss_pred ccEEEEEEEeCCCCEEEEEEeeC----CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeee-cccCeEEE
Q 020742 107 VPVTGAIILDETYERCILVKGWK----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIFGQQRV 181 (322)
Q Consensus 107 v~v~g~Iv~~~~~~kvLLvrr~~----~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~-~~~~~~~~ 181 (322)
..++++++++++ +|||+++++ .+.|+||||++++||++.+||+||++||||+++..+..+..+.. .......+
T Consensus 49 ~~av~vl~~~~~--~vLLvrq~r~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 126 (198)
T 1vhz_A 49 REAVMIVPIVDD--HLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLTFLKKLSMAPSYFSSKM 126 (198)
T ss_dssp CCEEEEEEEETT--EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEECCTTTCCCEE
T ss_pred CCEEEEEEEECC--EEEEEEcccCCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcCceEEEEEEeCCCCccCcEE
Confidence 356667767775 899999876 35899999999999999999999999999999987766665532 33445667
Q ss_pred EEEEEEeecCCCCCCCCCccceeeEEEEeccccccc--CCCcc-chhhhhh
Q 020742 182 RLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA--SDDVI-SHGVTGL 229 (322)
Q Consensus 182 ~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~--~~~~~-~~~~~~~ 229 (322)
++|++....... ...++.|..++.|+++++++++ .+++. ++++.++
T Consensus 127 ~~f~a~~~~~~~--~~~~~~E~~~~~w~~~~el~~~~~~~~i~~~~~~~al 175 (198)
T 1vhz_A 127 NIVVAQDLYPES--LEGDEPEPLPQVRWPLAHMMDLLEDPDFNEARNVSAL 175 (198)
T ss_dssp EEEEEEEEEECC--CCCCCSSCCCEEEEEGGGGGGGGGCTTTCBHHHHHHH
T ss_pred EEEEEEeCCccc--CCCCCCceEEEEEEEHHHHHHHHHcCCCCCHHHHHHH
Confidence 788876554321 1235678889999999999985 34444 5566554
No 16
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.75 E-value=6e-18 Score=150.05 Aligned_cols=126 Identities=13% Similarity=0.069 Sum_probs=90.7
Q ss_pred ccEEEEEEEeCCCCEEEEEEeeC---------CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeee-ccc
Q 020742 107 VPVTGAIILDETYERCILVKGWK---------GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIF 176 (322)
Q Consensus 107 v~v~g~Iv~~~~~~kvLLvrr~~---------~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~-~~~ 176 (322)
..++++++++++.++|||+++++ .+.|+||||++++||++.+||+||++||||+.+..+..+..+.. +..
T Consensus 57 ~~av~vl~~~~~~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~~~~~l~~~~~~~g~ 136 (209)
T 1g0s_A 57 GHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSFLASPGG 136 (209)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCCCEEEEEEEESCTTT
T ss_pred CCEEEEEEEECCCCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccCcEEEeEEEecCCCc
Confidence 45777888884445999999876 15799999999999999999999999999999988777766543 344
Q ss_pred CeEEEEEEEEEeecCC-CC-CCCCCccceeeEEEEeccccccc--CCCcc-chhhhhhhhh
Q 020742 177 GQQRVRLYIIAGVRDD-TA-FAPQTKKEISEIAWQRLDELQPA--SDDVI-SHGVTGLKLY 232 (322)
Q Consensus 177 ~~~~~~~y~~~~~~~~-~~-~~~~~~~Ei~~~~Wv~ldeL~~~--~~~~~-~~~~~~~~~~ 232 (322)
....+++|++...... .. ....+++|..++.|++++++.++ .+++. ++++.++.++
T Consensus 137 ~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~~g~i~d~~t~~al~~~ 197 (209)
T 1g0s_A 137 TSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWL 197 (209)
T ss_dssp BCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHHTTSSCBHHHHHHHHHH
T ss_pred cCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 4567788887642211 11 11235678889999999999884 55665 6777776444
No 17
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.75 E-value=8.7e-18 Score=141.63 Aligned_cols=108 Identities=19% Similarity=0.184 Sum_probs=77.8
Q ss_pred cccEEEEEEEeCCCCEEEEEEeeCCCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeee-------------e
Q 020742 106 RVPVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEF-------------I 172 (322)
Q Consensus 106 ~v~v~g~Iv~~~~~~kvLLvrr~~~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~-------------~ 172 (322)
+..++++||+++ ++|||++|.+.|.|.||||+++.||++.+||+||++||||+++.....+..+ .
T Consensus 5 ~~~~v~~vi~~~--~~vLL~~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (159)
T 3f6a_A 5 RHFTVSVFIVCK--DKVLLHLHKKAKKMLPLGGHIEVNELPEEACIREAKEEAGLNVTLYNPIDINLKKSCDLSGEKLLI 82 (159)
T ss_dssp SCEEEEEEEEET--TEEEEEECSSSCCEECEEEECCTTCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHTTCEEEC
T ss_pred ceEEEEEEEEEC--CEEEEEEcCCCCeEECCccCccCCCCHHHHHHHHHHHHhCCCceeccccccccccccccccccccc
Confidence 345677888874 3999999988899999999999999999999999999999998764433211 0
Q ss_pred e--------c-ccCeEEEEEEEEEeecCCCCCCCCCccceeeEEEEecccccccC
Q 020742 173 E--------K-IFGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPAS 218 (322)
Q Consensus 173 ~--------~-~~~~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~~ 218 (322)
. . ........+|.+....+. ..+ +.+|+.++.|++++++.++.
T Consensus 83 ~p~~~~~~~~~~~~~~~~~~f~~~~~~~~--~~~-~~~E~~~~~W~~~~el~~~~ 134 (159)
T 3f6a_A 83 NPIHTILGDVSPNHSHIDFVYYATTTSFE--TSP-EIGESKILKWYSKEDLKNAH 134 (159)
T ss_dssp CCSEEEEECSSSSSCEEEEEEEEECSCSC--CCC-CTTSCCCEEEECSSSSTTCS
T ss_pred CccccccccCCCCceEEEEEEEEEeCCCC--cCC-CCCcccceEEeeHHHHhhCc
Confidence 0 0 011233345655443332 122 46889999999999998853
No 18
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.75 E-value=1.7e-17 Score=140.02 Aligned_cols=107 Identities=20% Similarity=0.270 Sum_probs=78.2
Q ss_pred cccEEEEEEEeCCCCEEEEEEeeC---CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeeec---ccCeE
Q 020742 106 RVPVTGAIILDETYERCILVKGWK---GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEK---IFGQQ 179 (322)
Q Consensus 106 ~v~v~g~Iv~~~~~~kvLLvrr~~---~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~~---~~~~~ 179 (322)
...++++||+++ ++|||++|.+ .+.|.||||+++.||++.+||+||++||||+++.....+..+... .....
T Consensus 28 ~~~~v~~vi~~~--~~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 105 (157)
T 4dyw_A 28 PRVGCGAAIVRD--GRILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEELGIALERATLLCVVDHIDAANGEHW 105 (157)
T ss_dssp CEEEEEEEEEET--TEEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHHHSCEEESCEEEEEEEEEETTTTEEE
T ss_pred ceeEEEEEEEEC--CEEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHHHCcccccCcEEEEEEeeccCCCcEE
Confidence 344567777774 4999999985 689999999999999999999999999999998765544433221 12233
Q ss_pred EEEEEEEEeecCCCCCCCCCccceeeEEEEecccccc
Q 020742 180 RVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQP 216 (322)
Q Consensus 180 ~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~ 216 (322)
...+|.+....+.. ...+.+|+.++.|++++++.+
T Consensus 106 ~~~~f~~~~~~~~~--~~~~~~E~~~~~W~~~~el~~ 140 (157)
T 4dyw_A 106 VAPVYLAHAFSGEP--RVVEPDRHEALGWFALDDLPQ 140 (157)
T ss_dssp EEEEEEESEEESCC--CCSCTTTEEEEEEEETTSCCS
T ss_pred EEEEEEEEEcCCCc--ccCCCCcEeEEEEECHHHccc
Confidence 44556654444332 233457899999999999987
No 19
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.75 E-value=1.1e-17 Score=146.77 Aligned_cols=114 Identities=20% Similarity=0.279 Sum_probs=73.6
Q ss_pred CcccccEEEEEEEeCCCCEEEEEEeeC--CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeee--eecccCe
Q 020742 103 YKVRVPVTGAIILDETYERCILVKGWK--GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEF--IEKIFGQ 178 (322)
Q Consensus 103 y~~~v~v~g~Iv~~~~~~kvLLvrr~~--~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~--~~~~~~~ 178 (322)
+.+....++++++++++++|||+++.. .|.|.||||+++.||++.+||+||++||||+++.....+... .......
T Consensus 22 ~~~~~v~v~~~v~~~~~~~vLL~~r~~~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~~~~l~~~~~~~~~~~~~ 101 (199)
T 3h95_A 22 SMSHQVGVAGAVFDESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAF 101 (199)
T ss_dssp ----CCEEEEEEEETTTTEEEEEEESSSSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEECC------
T ss_pred cCcccceEEEEEEeCCCCEEEEEEEcCCCCCCEECCccccCCCCCHHHHHHHHHHHHhCCccccceEEEEEeeecCCCCc
Confidence 334344555666665545999999876 799999999999999999999999999999998753333211 1111112
Q ss_pred EEEEEEEEEeec-CCCCCCCCCccceeeEEEEeccccccc
Q 020742 179 QRVRLYIIAGVR-DDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 179 ~~~~~y~~~~~~-~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
....+|+++.+. ..... ..+.+|+.++.|+++++++++
T Consensus 102 ~~~~~~~~~~~~~~~~~~-~~~~~E~~~~~W~~~~el~~~ 140 (199)
T 3h95_A 102 GKSDMYIICRLKPYSFTI-NFCQEECLRCEWMDLNDLAKT 140 (199)
T ss_dssp ---CEEEEEEEEESCCCC-CCCTTTEEEEEEEEHHHHHHC
T ss_pred eeEEEEEEEEEcCCCccc-CCCccceeeeEEEeHHHHhhh
Confidence 233334444433 22222 234689999999999999875
No 20
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.75 E-value=1.4e-17 Score=137.32 Aligned_cols=106 Identities=18% Similarity=0.158 Sum_probs=78.3
Q ss_pred ccccEEEEEEEeCCCCEEEEEEeeC------CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeee-cccC
Q 020742 105 VRVPVTGAIILDETYERCILVKGWK------GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIFG 177 (322)
Q Consensus 105 ~~v~v~g~Iv~~~~~~kvLLvrr~~------~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~-~~~~ 177 (322)
+.+.++++||.++ ++|||++|.. .|.|.||||+++.||++.+||+||++||||+++.....+..+.. ....
T Consensus 4 ~~~~~v~~vi~~~--~~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~~~~~~~~~~ 81 (140)
T 3gwy_A 4 KSIEVVAAVIRLG--EKYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVGEKLLTVHHTYPDF 81 (140)
T ss_dssp SCEEEEEEEEEET--TEEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCSSC
T ss_pred eEEEEEEEEEEeC--CEEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEeceEEEEEEEEeCCc
Confidence 3466778888874 4999999874 37899999999999999999999999999999887655544322 2233
Q ss_pred eEEEEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 178 QQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 178 ~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
...+.+|.+....+. + ...|+.++.|++++++.++
T Consensus 82 ~~~~~~f~~~~~~~~----~-~~~E~~~~~W~~~~el~~~ 116 (140)
T 3gwy_A 82 EITMHAFLCHPVGQR----Y-VLKEHIAAQWLSTREMAIL 116 (140)
T ss_dssp CEEEEEEEEEECCSC----C-CCCSSCEEEEECHHHHTTS
T ss_pred eEEEEEEEEEecCCc----c-cccccceeEeccHHHHhhC
Confidence 455666766544332 2 2468889999999999874
No 21
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.75 E-value=1.5e-17 Score=135.42 Aligned_cols=104 Identities=23% Similarity=0.368 Sum_probs=76.7
Q ss_pred ccEEEEEEEeCCCCEEEEEEeeCCCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeee--eecc---cCeEEE
Q 020742 107 VPVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEF--IEKI---FGQQRV 181 (322)
Q Consensus 107 v~v~g~Iv~~~~~~kvLLvrr~~~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~--~~~~---~~~~~~ 181 (322)
+.++++|+++++ +|||++|.+ |.|.||||+++.||++.+||+||++||||+++.....+..+ .... .....+
T Consensus 4 ~~~~~~vi~~~~--~vLl~~r~~-~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (134)
T 2pbt_A 4 EFSAGGVLFKDG--EVLLIKTPS-NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIHYWYTLKGERIFKTV 80 (134)
T ss_dssp EEEEEEEEEETT--EEEEEECTT-SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETTEEEEEEE
T ss_pred ceEEEEEEEECC--EEEEEEeCC-CcEECCccccCCCCCHHHHHHHHHHHHHCCccEEeeeeeEEEEEeeCCCcEEEEEE
Confidence 456778888853 999999976 99999999999999999999999999999998865444432 1111 123345
Q ss_pred EEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 182 RLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 182 ~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
++|.+...... +...+|+.++.|++++++.++
T Consensus 81 ~~~~~~~~~~~----~~~~~e~~~~~W~~~~el~~~ 112 (134)
T 2pbt_A 81 KYYLMKYKEGE----PRPSWEVKDAKFFPIKEAKKL 112 (134)
T ss_dssp EEEEEEEEEEC----CCCCTTSSEEEEEEHHHHHHH
T ss_pred EEEEEEecCCC----cCCCcceeEEEEEcHHHHHhh
Confidence 56666544433 122238899999999999873
No 22
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.75 E-value=4.6e-18 Score=142.71 Aligned_cols=110 Identities=24% Similarity=0.300 Sum_probs=72.8
Q ss_pred cccccEEEEEEEeCCCCEEEEEEeeCCCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeee------ecccC
Q 020742 104 KVRVPVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFI------EKIFG 177 (322)
Q Consensus 104 ~~~v~v~g~Iv~~~~~~kvLLvrr~~~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~------~~~~~ 177 (322)
....+++++|+++++ ++|||++|. .+.|+||||+++.||++.+||+||++||||+++.....+..+. ....+
T Consensus 18 ~~~~~~v~~ii~~~~-~~vLL~~r~-~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 95 (153)
T 3eds_A 18 LIFXPSVAAVIKNEQ-GEILFQYPG-GEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVKKQKGVFGGKEYRYTYSNG 95 (153)
T ss_dssp CEEEEEEEEEEBCTT-CCEEEECC----CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEECSGGGEEECTTS
T ss_pred cEEeeeEEEEEEcCC-CeEEEEEcC-CCcEECCccccCCCCCHHHHHHHHHHHHHCccceeeeEEEEecccceeeecCCC
Confidence 335567777788766 489999888 8999999999999999999999999999999988655444321 11111
Q ss_pred ---eEEEEEEEEEeecCCCCCCCCCccceeeEEEEecccccccC
Q 020742 178 ---QQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPAS 218 (322)
Q Consensus 178 ---~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~~ 218 (322)
.....+|.+....+.. ....+|+.++.|+++++++++.
T Consensus 96 ~~~~~~~~~f~~~~~~~~~---~~~~~E~~~~~W~~~~el~~l~ 136 (153)
T 3eds_A 96 DEVEYIVVVFECEVTSGEL---RSIDGESLKLQYFSLSEKPPLA 136 (153)
T ss_dssp CEEEEEEEEEEEEEEEECC---C-------CEEEECGGGCCCBS
T ss_pred CeEEEEEEEEEEEecCCcc---ccCCCcEEEEEEECHHHCchhc
Confidence 2245556665443331 2245788999999999999853
No 23
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.75 E-value=5e-18 Score=146.38 Aligned_cols=120 Identities=20% Similarity=0.232 Sum_probs=86.8
Q ss_pred ccEEEEEEEeCCCCEEEEEEeeC----CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeee-cccCeEEE
Q 020742 107 VPVTGAIILDETYERCILVKGWK----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIFGQQRV 181 (322)
Q Consensus 107 v~v~g~Iv~~~~~~kvLLvrr~~----~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~-~~~~~~~~ 181 (322)
..++++++++.++ +|||+++.+ .+.|+||||+++.||++.+||+||++||||+++..+..+..+.. ....+..+
T Consensus 41 ~~~v~v~i~~~~~-~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~ 119 (182)
T 2yvp_A 41 VAASFVLPVTERG-TALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELREEVGAEAETLIPLPSFHPQPSFTAVVF 119 (182)
T ss_dssp CEEEEEEEBCTTS-EEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCEECSCEEECCCBCSCTTTBCCEE
T ss_pred CCEEEEEEEcCCC-EEEEEEeccCCCCCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCcccEEEEEEEeCCCCccccEE
Confidence 3466777777764 999999875 57999999999999999999999999999999887666555432 23334567
Q ss_pred EEEEEEeecCCCCCCCCCccceeeEEEEeccccccc--CCCcc-chhhhh
Q 020742 182 RLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA--SDDVI-SHGVTG 228 (322)
Q Consensus 182 ~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~--~~~~~-~~~~~~ 228 (322)
++|++........ ...+.+|+.++.|++++++.++ .+++. +.++.+
T Consensus 120 ~~f~~~~~~~~~~-~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~a 168 (182)
T 2yvp_A 120 HPFLALKARVVTP-PTLEEGELLESLELPLTEVYALLAKGEIQDASTALT 168 (182)
T ss_dssp EEEEECSCEECSC-CCCCTTCCEEEEEEEHHHHHHHHHTTCCCCHHHHHH
T ss_pred EEEEEeccccCCC-CCCCCCceEEEEEEEHHHHHHHHHcCCcCChHHHHH
Confidence 7777754332222 1235688999999999999884 44443 444443
No 24
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.74 E-value=2.1e-17 Score=137.97 Aligned_cols=125 Identities=20% Similarity=0.234 Sum_probs=83.5
Q ss_pred EEEEEEeCCCCEEEEEEeeC--CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeee--eecccCeEEEEEEE
Q 020742 110 TGAIILDETYERCILVKGWK--GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEF--IEKIFGQQRVRLYI 185 (322)
Q Consensus 110 ~g~Iv~~~~~~kvLLvrr~~--~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~--~~~~~~~~~~~~y~ 185 (322)
+++|+.++ ++|||++|.. .+.|.||||+++.||++.+||+||++||||+++.....+..+ ...........+|.
T Consensus 8 v~~ii~~~--~~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~f~ 85 (153)
T 3shd_A 8 VACVVHAE--GKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFLRFLFA 85 (153)
T ss_dssp EEEEEEET--TEEEEEEEEETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCTTSCCEEEEEEE
T ss_pred EEEEEEeC--CEEEEEEecCCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccccCcEEEEEEEecCCCceEEEEEEE
Confidence 34555554 3999999864 678999999999999999999999999999998865444433 22333334445565
Q ss_pred EEeecCCCCCCCCCccceeeEEEEecccccccCCCccchhhhhhhhhhhhh-hHHHHHHHHHhcCCC
Q 020742 186 IAGVRDDTAFAPQTKKEISEIAWQRLDELQPASDDVISHGVTGLKLYMVAP-FLASLKKWISAHKPS 251 (322)
Q Consensus 186 ~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~~~~~~~~~~~~~~~~~v~p-f~~~L~~wi~~~~~~ 251 (322)
+..... ... .....|+.++.|++++++..... ...| ....+.+|+..+..+
T Consensus 86 ~~~~~~-~~~-~~~~~E~~~~~W~~~~el~~~~~-------------~~~~~~~~~l~~~~~~~~~~ 137 (153)
T 3shd_A 86 IELEQI-CPT-QPHDSDIDCCRWVSAEEILQASN-------------LRSPLVAESIRCYQSGQRYP 137 (153)
T ss_dssp EECSSC-CCC-CCCSTTCCEEEEECHHHHHTCSC-------------BSSTHHHHHHHHHHHTCCBC
T ss_pred EEcccc-CcC-CCCcccceeeEEecHHHhhcccc-------------ccCchHHHHHHHHHhCCccc
Confidence 543332 222 23467899999999999932111 0112 235677788766544
No 25
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.74 E-value=2.3e-17 Score=132.97 Aligned_cols=102 Identities=22% Similarity=0.372 Sum_probs=77.5
Q ss_pred EEEEEEEeCCCCEEEEEEeeCCCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeee-cccCeEEEEEEEEE
Q 020742 109 VTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIFGQQRVRLYIIA 187 (322)
Q Consensus 109 v~g~Iv~~~~~~kvLLvrr~~~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~-~~~~~~~~~~y~~~ 187 (322)
+++++++++++ +|||++|.. |.|.||||+++.||++.+||+||++||||+.+.....+..+.. .......+.+|.+.
T Consensus 4 ~~~~vi~~~~~-~vLl~~r~~-g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (126)
T 1vcd_A 4 GAGGVVFNAKR-EVLLLRDRM-GFWVFPKGHPEPGESLEEAAVREVWEETGVRAEVLLPLYPTRYVNPKGVEREVHWFLM 81 (126)
T ss_dssp EEEEEEECTTS-CEEEEECTT-SCEECCEECCCTTCCHHHHHHHHHHHHHCCEEEEEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred EEEEEEEcCCC-EEEEEEECC-CCccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeeccEEeEEEEecCCceEEEEEEEEE
Confidence 56777887764 899999876 8999999999999999999999999999999886554444321 12233456667665
Q ss_pred eecCCCCCCCCCccceeeEEEEecccccc
Q 020742 188 GVRDDTAFAPQTKKEISEIAWQRLDELQP 216 (322)
Q Consensus 188 ~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~ 216 (322)
...+. +....|+.++.|++++++.+
T Consensus 82 ~~~~~----~~~~~e~~~~~w~~~~el~~ 106 (126)
T 1vcd_A 82 RGEGA----PRLEEGMTGAGWFSPEEARA 106 (126)
T ss_dssp EEESC----CCCCTTCCEEEEECHHHHHH
T ss_pred EcCCC----CCCCcceeeeEEcCHHHHHH
Confidence 44433 23457889999999999987
No 26
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.74 E-value=1.1e-17 Score=149.68 Aligned_cols=137 Identities=14% Similarity=0.179 Sum_probs=83.8
Q ss_pred hHHHHHHHHhCCCCcccccccchhHHHhhhcCCcccccEEEEEEEeCCCCEEEEEEeeC---------------------
Q 020742 71 TLKEFTSLMFNSCDVLRPYVAHIDDIFKDFTSYKVRVPVTGAIILDETYERCILVKGWK--------------------- 129 (322)
Q Consensus 71 ~l~~f~~~l~~~~~~l~~~~~~~~~~~~~~~~y~~~v~v~g~Iv~~~~~~kvLLvrr~~--------------------- 129 (322)
++.......++|....+.+.. +..+|++++++.+.+++|||++++
T Consensus 14 ~~~~~~~~~~~G~~~~~e~v~--------------~~~aV~vl~~~~~~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~ 79 (218)
T 3q91_A 14 GTENLYFQSMNGAQKSWDFMK--------------THDSVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQ 79 (218)
T ss_dssp -----------------------------------CCCEEEEEEEEGGGTEEEEEEEECHHHHHHHTC------------
T ss_pred ceeEEEEECCCCCEEEEEEEE--------------cCCeEEEEEEECCCCEEEEEEcccccccccccccccccccccccc
Confidence 344455556666654443332 357888888885546999999876
Q ss_pred --------------CCcEEcccccCCC-CCCHHHHHHHHHHHHhCCcc--cceeeeeeeee-cccCeEEEEEEEEEeecC
Q 020742 130 --------------GSSWSFPRGKKNK-DEEDHACAIREVQEETGFDV--SKLLNKDEFIE-KIFGQQRVRLYIIAGVRD 191 (322)
Q Consensus 130 --------------~~~w~fPgG~ie~-gEs~~eaA~REv~EETGl~v--~~l~~~~~~~~-~~~~~~~~~~y~~~~~~~ 191 (322)
++.|+||||+++. ||++.+||+||++||||+.+ ..+..+..+.. .......+++|++.....
T Consensus 80 ~~~~~~~~~~~~~~~~~welPgG~ve~~gEs~~eaA~REl~EEtGl~~~~~~l~~l~~~~~~~g~~~~~~~~f~a~~~~~ 159 (218)
T 3q91_A 80 DGPRELQPALPGSAGVTVELCAGLVDQPGLSLEEVACKEAWEECGYHLAPSDLRRVATYWSGVGLTGSRQTMFYTEVTDA 159 (218)
T ss_dssp -------------CCEEEECEEEECCSSSCCHHHHHHHHHHHHHCBCCCGGGCEEEEEEEEC---CCEEEEEEEEEECGG
T ss_pred ccccccccccccCCCeEEECCcceeCCCCCCHHHHHHHHHHHHhCCccccCceEEEEEEecCCCccceEEEEEEEEECCc
Confidence 3689999999999 99999999999999999998 66777766543 445667788888764422
Q ss_pred C---CCCCCCCccceeeEEEEeccccccc--CCCc
Q 020742 192 D---TAFAPQTKKEISEIAWQRLDELQPA--SDDV 221 (322)
Q Consensus 192 ~---~~~~~~~~~Ei~~~~Wv~ldeL~~~--~~~~ 221 (322)
. ......+++|+.++.|++++++.++ .+++
T Consensus 160 ~~~~~~~~~~d~~E~~ev~wv~l~el~~~i~~g~i 194 (218)
T 3q91_A 160 QRSGPGGGLVEEGELIEVVHLPLEGAQAFADDPDI 194 (218)
T ss_dssp GBCC---------CCEEEEEEEGGGHHHHHHCTTS
T ss_pred ccccCCCCCCCCCcEEEEEEEEHHHHHHHHHcCCC
Confidence 1 0011234678999999999999884 4444
No 27
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.74 E-value=1.5e-17 Score=141.79 Aligned_cols=107 Identities=20% Similarity=0.298 Sum_probs=72.6
Q ss_pred EEEEEEEeCCCCEEEEEEeeC-CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeeecccC-eEEEEEEEE
Q 020742 109 VTGAIILDETYERCILVKGWK-GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEKIFG-QQRVRLYII 186 (322)
Q Consensus 109 v~g~Iv~~~~~~kvLLvrr~~-~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~~~~~-~~~~~~y~~ 186 (322)
.+++||.++ ++|||++|.+ .+.|+||||+++.||++.+||+||++||||+++.....+..+...... .....+|.+
T Consensus 25 ~v~~ii~~~--~~vLL~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (171)
T 3id9_A 25 RVTGILIED--EKVLLVKQKVANRDWSLPGGRVENGETLEEAMIREMREETGLEVKIKKLLYVCDKPDASPSLLHITFLL 102 (171)
T ss_dssp EEEEEEEET--TEEEEEECSSTTCCEECCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEEETTSSSCEEEEEEEE
T ss_pred EEEEEEEEC--CEEEEEEEECCCCeEECCCccCCCCCCHHHHHHHHHHHHHCCccccceEEEEEcccCCCCcEEEEEEEE
Confidence 445666665 3999999987 799999999999999999999999999999998754444433332222 233334545
Q ss_pred EeecCCCCCC--CCCccceeeEEEEeccccccc
Q 020742 187 AGVRDDTAFA--PQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 187 ~~~~~~~~~~--~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
....+..... ..+.+|+.++.|++++++.++
T Consensus 103 ~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~ 135 (171)
T 3id9_A 103 ERIEGEITLPSNEFDHNPIHDVQMVPINELSYY 135 (171)
T ss_dssp EEC-------------CCCCCEEEEETGGGGGG
T ss_pred EEcCCcccCCccCCCcCeeeeEEEEeHHHHhhC
Confidence 4333321110 124578899999999999874
No 28
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.74 E-value=4e-17 Score=136.83 Aligned_cols=110 Identities=20% Similarity=0.326 Sum_probs=80.8
Q ss_pred cccEEEEEEEeCCCCEEEEEEeeC-------CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeee-ccc-
Q 020742 106 RVPVTGAIILDETYERCILVKGWK-------GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIF- 176 (322)
Q Consensus 106 ~v~v~g~Iv~~~~~~kvLLvrr~~-------~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~-~~~- 176 (322)
...+++++|++.+ ++|||++|.+ .|.|+||||+++.||++.+||+||++||||+.+..+..+..+.. ...
T Consensus 12 ~~~~~~~vi~~~~-~~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~l~~~~~~~~~~ 90 (159)
T 1sjy_A 12 ELRAAGVVLLNER-GDILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPVKFLGAYLGRFPDG 90 (159)
T ss_dssp CEEEEEEEEBCTT-CCEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEEEEEEEEEEEEECTTS
T ss_pred EEEeEEEEEEeCC-CCEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCccceeeEEEEEEecccCCC
Confidence 3456777777765 4899999973 58999999999999999999999999999999887555544322 122
Q ss_pred CeEEEEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 177 GQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 177 ~~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
....+.+|.+....+. ...+.+.+|+.++.|++++++.++
T Consensus 91 ~~~~~~~f~~~~~~~~-~~~~~~~~E~~~~~W~~~~el~~~ 130 (159)
T 1sjy_A 91 VLILRHVWLAEPEPGQ-TLAPAFTDEIAEASFVSREDFAQL 130 (159)
T ss_dssp CEEEEEEEEEEECSSC-CCCCCCCSSEEEEEEECHHHHHHH
T ss_pred ceEEEEEEEEEccCCC-ccccCCCCceeEEEEecHHHHHHh
Confidence 3455666666543332 122324688999999999999874
No 29
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.74 E-value=3.6e-17 Score=133.89 Aligned_cols=108 Identities=20% Similarity=0.328 Sum_probs=75.2
Q ss_pred ccEEEEEEEeCC--CCEEEEEEeeC-CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeee----eeee-ecccCe
Q 020742 107 VPVTGAIILDET--YERCILVKGWK-GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNK----DEFI-EKIFGQ 178 (322)
Q Consensus 107 v~v~g~Iv~~~~--~~kvLLvrr~~-~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~----~~~~-~~~~~~ 178 (322)
+.++++|+++++ .++|||+++.. .+.|.||||+++.||++.+||+||++||||+.+..+... ..+. .....+
T Consensus 3 ~~~~~~vi~~~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~ 82 (138)
T 1ktg_A 3 VKAAGLVIYRKLAGKIEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCHETLFYEAKGKP 82 (138)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEESSTTCCEESSEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEEEETTEE
T ss_pred eEEEEEEEEEecCCCcEEEEEEccCCCCcEeCCccccCCCCCHHHHHHHHHHHHHCCCccceEEeccccceEEEEeCCCc
Confidence 345677777642 24899999864 579999999999999999999999999999976553322 1111 111223
Q ss_pred EEEEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 179 QRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 179 ~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
..+.+|.+...... .....+|+.++.|++++++.++
T Consensus 83 ~~~~~f~~~~~~~~---~~~~~~e~~~~~W~~~~el~~~ 118 (138)
T 1ktg_A 83 KSVKYWLAKLNNPD---DVQLSHEHQNWKWCELEDAIKI 118 (138)
T ss_dssp EEEEEEEEEECSCC---CCCCCTTEEEEEEECHHHHHHH
T ss_pred eEEEEEEEEecCCc---ccCCCchhcEeEeccHHHHHHh
Confidence 44556655443322 2334678999999999999873
No 30
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.73 E-value=3.2e-17 Score=136.42 Aligned_cols=116 Identities=16% Similarity=0.101 Sum_probs=78.3
Q ss_pred CEEEEEEeeCCCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccce-eeeee---eee-----cccCeEEEEEEEEEeec
Q 020742 120 ERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKL-LNKDE---FIE-----KIFGQQRVRLYIIAGVR 190 (322)
Q Consensus 120 ~kvLLvrr~~~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l-~~~~~---~~~-----~~~~~~~~~~y~~~~~~ 190 (322)
++|||++|...|.|.||||+++.||++.+||+||++||||+++... ..+.. +.. ........++|.+....
T Consensus 20 ~~vLl~~r~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 99 (149)
T 3son_A 20 YQFGVLHRTDADVWQFVAGGGEDEEAISETAKRESIEELNLDVDVKMYSLDSHASIPNFHFSFNKPYVVPEYCFAIDLTS 99 (149)
T ss_dssp EEEEEEEESSSSCEECEEEECCTTCCHHHHHHHHHHHHHTCCSCCCEEEEEEEEEEEGGGTCSSSCSEEEEEEEEEECTT
T ss_pred eEEEEEEEcCCCCEeCCccccCCCCCHHHHHHHHHHHHhCCCcccceEEEEeeecccceeeccCCceEeEEEEEEEEcCC
Confidence 5999999988899999999999999999999999999999998752 11111 111 11123445566664432
Q ss_pred CCCCCCCCCccceeeEEEEecccccccCCCccchhhhhhhhhhhhhhHHHHHHHHHhc
Q 020742 191 DDTAFAPQTKKEISEIAWQRLDELQPASDDVISHGVTGLKLYMVAPFLASLKKWISAH 248 (322)
Q Consensus 191 ~~~~~~~~~~~Ei~~~~Wv~ldeL~~~~~~~~~~~~~~~~~~~v~pf~~~L~~wi~~~ 248 (322)
.... +...+|+.++.|++++++.++... ......+..+.+++..+
T Consensus 100 ~~~~--~~~~~E~~~~~W~~~~el~~~~~~-----------~~~~~~l~~~~~~l~~~ 144 (149)
T 3son_A 100 CSYQ--VTLSLEHSELRWVSYESAIQLLEW-----------DSNKTALYELNERLKNN 144 (149)
T ss_dssp TGGG--CCCCTTEEEEEEECHHHHHHHCCC-----------HHHHHHHHHHHHHHHTT
T ss_pred CCCc--ccCCCceeeEEEeCHHHHHHHhcC-----------HHHHHHHHHHHHHHhhc
Confidence 1222 222488999999999999874211 12234456666666655
No 31
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.73 E-value=2.9e-17 Score=135.44 Aligned_cols=108 Identities=26% Similarity=0.310 Sum_probs=78.3
Q ss_pred cccccEEEEEEEeCCCCEEEEEEeeC----CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccce--eeeeeeee-ccc
Q 020742 104 KVRVPVTGAIILDETYERCILVKGWK----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKL--LNKDEFIE-KIF 176 (322)
Q Consensus 104 ~~~v~v~g~Iv~~~~~~kvLLvrr~~----~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l--~~~~~~~~-~~~ 176 (322)
++.+.++++++++.+ ++|||++|.. .|.|+||||+++.||++.+||+||++||||+.+... ..+..+.. ...
T Consensus 5 ~~~~~~~~~vi~~~~-~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~ 83 (144)
T 3r03_A 5 LPILLVTAAALIDPD-GRVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRASCLAPLAFASHSYDT 83 (144)
T ss_dssp -CEEEEEEEEEBCTT-SCEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSS
T ss_pred CceeEEEEEEEEcCC-CEEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCceeeccceEEEEeeeccCCC
Confidence 344566677777766 4899999875 489999999999999999999999999999998764 33332222 223
Q ss_pred CeEEEEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 177 GQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 177 ~~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
....+.+|.+....+. + ...|..++.|++++++.++
T Consensus 84 ~~~~~~~~~~~~~~~~----~-~~~e~~~~~W~~~~el~~~ 119 (144)
T 3r03_A 84 FHLLMPLYACRSWRGR----A-TAREGQTLAWVRAERLREY 119 (144)
T ss_dssp SEEEEEEEEECCCBSC----C-CCCSSCEEEEECGGGGGGS
T ss_pred eEEEEEEEEEEecCCc----c-CCCCcceEEEEeHHHhccC
Confidence 3445556665433331 2 2467889999999999884
No 32
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.73 E-value=1.8e-17 Score=159.23 Aligned_cols=142 Identities=14% Similarity=0.113 Sum_probs=107.7
Q ss_pred eCCccCCCCCCcchHHHHHHHHhCCCCcccccccchhHHHhhhcCCcccccEEEEEEEeCCCCEEEEEEeeC----CCcE
Q 020742 58 DNSVENNPSLKSFTLKEFTSLMFNSCDVLRPYVAHIDDIFKDFTSYKVRVPVTGAIILDETYERCILVKGWK----GSSW 133 (322)
Q Consensus 58 d~~~~~~p~l~~~~l~~f~~~l~~~~~~l~~~~~~~~~~~~~~~~y~~~v~v~g~Iv~~~~~~kvLLvrr~~----~~~w 133 (322)
..|++++|.|..|+++++|...-++....+|+... ++..+.+.++++||.+.+ ++|||+||.. +|.|
T Consensus 199 ~~C~~~~P~C~~Cpl~~~C~~~~~~~~~~~PvK~~--------kk~~~~~~~~~~vi~~~~-g~vLL~rR~~~g~~~GlW 269 (369)
T 3fsp_A 199 LVCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKMK--------KTAVKQVPLAVAVLADDE-GRVLIRKRDSTGLLANLW 269 (369)
T ss_dssp HTSCSSSCCTTTCTTGGGCHHHHHTCGGGCSCCCC--------CCCCEEEEEEEEEEECSS-SEEEEEECCSSSTTTTCE
T ss_pred HhcCCCCCCCCCCCChhhhHHHhcCCcccCCcccc--------ccCcceEEEEEEEEEeCC-CEEEEEECCCCCCcCCcc
Confidence 34888999999999999999999999888887765 455556667777777666 4999999975 5899
Q ss_pred EcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeee-cccCeEEEEEEEEEeecCCCCCCCCCccceeeEEEEecc
Q 020742 134 SFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIFGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLD 212 (322)
Q Consensus 134 ~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~-~~~~~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ld 212 (322)
+||||+++.| ++.+|++||+.||||+++.....+..+.. ....+..+++|.+.. ... ..|..++.|++++
T Consensus 270 efPGG~ve~g-t~~~al~REl~EE~Gl~v~~~~~l~~~~h~~~h~~~~~~~~~~~~-~~~-------~~e~~~~~Wv~~~ 340 (369)
T 3fsp_A 270 EFPSCETDGA-DGKEKLEQMVGEQYGLQVELTEPIVSFEHAFSHLVWQLTVFPGRL-VHG-------GPVEEPYRLAPED 340 (369)
T ss_dssp ECCEEECSSS-CTHHHHHHHHTTSSSCCEEECCCCCEEEEECSSEEEEEEEEEEEE-CCS-------SCCCTTEEEEEGG
T ss_pred cCCCcccCCC-CcHHHHHHHHHHHhCCceeeecccccEEEEcceEEEEEEEEEEEE-cCC-------CCCccccEEeeHH
Confidence 9999999999 99999999999999999876544433221 122223445555532 221 3566789999999
Q ss_pred ccccc
Q 020742 213 ELQPA 217 (322)
Q Consensus 213 eL~~~ 217 (322)
++..+
T Consensus 341 el~~~ 345 (369)
T 3fsp_A 341 ELKAY 345 (369)
T ss_dssp GGGGS
T ss_pred HhhhC
Confidence 99874
No 33
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.72 E-value=1.4e-17 Score=142.16 Aligned_cols=107 Identities=21% Similarity=0.358 Sum_probs=77.2
Q ss_pred cccEEEEEEEeCCCCEEEEEEeeC----CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeee-cccCeEE
Q 020742 106 RVPVTGAIILDETYERCILVKGWK----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIFGQQR 180 (322)
Q Consensus 106 ~v~v~g~Iv~~~~~~kvLLvrr~~----~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~-~~~~~~~ 180 (322)
+.+++++++++ + +++||+++.+ .+.|+||||+++.||++.+||+||++||||+ +..+..+..+.. .......
T Consensus 33 ~~~~v~vii~~-~-~~vLL~~~~r~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~~~~~l~~~~~~~~~~~~~ 109 (170)
T 1v8y_A 33 HKPAVAVIALR-E-GRMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SGDLTYLFSYFVSPGFTDEK 109 (170)
T ss_dssp ECCEEEEEEEE-T-TEEEEEECCBTTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EEEEEEEEEEESCTTTBCCE
T ss_pred cCCeEEEEEEE-C-CEEEEEEEEeCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC-CcCceeeEEEecCCCccccE
Confidence 44678888888 4 4999999865 5789999999999999999999999999999 776666655433 2333456
Q ss_pred EEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 181 VRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 181 ~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
+++|++...... . ...+.+|+.++.|++++++.++
T Consensus 110 ~~~f~~~~~~~~-~-~~~~~~E~~~~~W~~~~el~~~ 144 (170)
T 1v8y_A 110 THVFLAENLKEV-E-AHPDEDEAIEVVWMRPEEALER 144 (170)
T ss_dssp EEEEEEEEEEEC-C---------CEEEEECHHHHHHH
T ss_pred EEEEEEEecccc-C-CCCCCCceEEEEEEEHHHHHHH
Confidence 777777654422 1 1234678899999999999874
No 34
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.72 E-value=2.2e-17 Score=139.82 Aligned_cols=112 Identities=21% Similarity=0.202 Sum_probs=80.1
Q ss_pred cCCcccccEEEEEEEeCCCCEEEEEEeeC---CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeeec---
Q 020742 101 TSYKVRVPVTGAIILDETYERCILVKGWK---GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEK--- 174 (322)
Q Consensus 101 ~~y~~~v~v~g~Iv~~~~~~kvLLvrr~~---~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~~--- 174 (322)
++..+...+++++|.+++.++|||++|.. .|.|+||||+++.||++.+||+||++||||+.+.....+..+...
T Consensus 4 ~r~~~~~~~v~~vi~~~~~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~ 83 (161)
T 3exq_A 4 TRTQPVELVTMVMVTDPETQRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGVTFCGTCEWFDDD 83 (161)
T ss_dssp CSCCCEEEEEEEEEBCTTTCCEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCCEEEEEEEEECSS
T ss_pred CccCCceEEEEEEEEeCCCCEEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCcEecCCcEEEEEecccCC
Confidence 34445556677777777645999999876 467889999999999999999999999999998875544443221
Q ss_pred ccCeEEEEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 175 IFGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 175 ~~~~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
........+|.+....+. + ...|..++.|+++++++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~----~-~~~e~~~~~W~~~~el~~~ 121 (161)
T 3exq_A 84 RQHRKLGLLYRASNFTGT----L-KASAEGQLSWLPITALTRE 121 (161)
T ss_dssp CSSEEEEEEEEECCEESC----C-CGGGTTTEEEECGGGCCTT
T ss_pred CCeEEEEEEEEEeccCCc----c-CCCccceEEEeeHHHhhhC
Confidence 222344455555433332 2 2466788999999999874
No 35
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.72 E-value=2.9e-16 Score=133.64 Aligned_cols=109 Identities=18% Similarity=0.271 Sum_probs=78.8
Q ss_pred ccEEEEEEEeCCCCEEEEEEeeCCCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeee------eecc-----
Q 020742 107 VPVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEF------IEKI----- 175 (322)
Q Consensus 107 v~v~g~Iv~~~~~~kvLLvrr~~~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~------~~~~----- 175 (322)
.+++++++++.+ ++|||++|...+.|.+|||+++.||++.+||+||++||||+++..+..+..+ ....
T Consensus 8 ~~~v~~~i~~~~-~~vLl~~r~~~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (164)
T 2kdv_A 8 RPNVGIVICNRQ-GQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRW 86 (164)
T ss_dssp EEEEEEEEECTT-SEEEEEEETTCCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEECSSCEEEECCTTTCCT
T ss_pred CcEEEEEEEccC-CEEEEEEEcCCCeEECCeeecCCCCCHHHHHHHHHHHHHCCCccceEEEEEecceeEEecCcceeee
Confidence 346778888776 4999999887889999999999999999999999999999998865444332 1110
Q ss_pred -----cCeEEEEEEEEEeecCCCCCCC--CCccceeeEEEEecccccc
Q 020742 176 -----FGQQRVRLYIIAGVRDDTAFAP--QTKKEISEIAWQRLDELQP 216 (322)
Q Consensus 176 -----~~~~~~~~y~~~~~~~~~~~~~--~~~~Ei~~~~Wv~ldeL~~ 216 (322)
...+..++|++........... ....|+.+++|++++++..
T Consensus 87 ~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~E~~~~~W~~~~e~~~ 134 (164)
T 2kdv_A 87 DTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVR 134 (164)
T ss_dssp TSSSCCCEEEEEEEEEEESSCGGGCCSCSSSSCSEEEEEEEETTTGGG
T ss_pred ccCcccccceeEEEEEEecCCccccccCCCCCchhceEEEecHHHhhh
Confidence 1233556666654433222222 2346899999999999865
No 36
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.72 E-value=1.3e-16 Score=137.06 Aligned_cols=127 Identities=18% Similarity=0.251 Sum_probs=87.4
Q ss_pred cEEEEEEEeCCCCEEEEEEeeC-----CCcEEc-ccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeee-cccCeEE
Q 020742 108 PVTGAIILDETYERCILVKGWK-----GSSWSF-PRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIFGQQR 180 (322)
Q Consensus 108 ~v~g~Iv~~~~~~kvLLvrr~~-----~~~w~f-PgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~-~~~~~~~ 180 (322)
.++++++++.++ +|||++|.. .|.|+| |||+++.||++.+||+||++||||+.+..+..+..+.. ....+..
T Consensus 38 ~~~~v~i~~~~~-~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 116 (180)
T 2fkb_A 38 RATYIVVHDGMG-KILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEHGQFYFEDKNCRVW 116 (180)
T ss_dssp EEEEEEEECSSS-CEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSCCCEEEEEEEEEETTEEEE
T ss_pred eEEEEEEECCCC-EEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCccceEEEEEEEecCCCceEE
Confidence 466777777664 899998864 478999 99999999999999999999999998877655555432 2223445
Q ss_pred EEEEEEEeecCCCCCCCCCccceeeEEEEecccccccCCCccchhhhhhhhhhhhhhHHHHHHHHHhcCCC
Q 020742 181 VRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPASDDVISHGVTGLKLYMVAPFLASLKKWISAHKPS 251 (322)
Q Consensus 181 ~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~~~~~~~~~~~~~~~~~v~pf~~~L~~wi~~~~~~ 251 (322)
.++|.+. .... . ..+.+|+.++.|++++++.++...+ ..+....+..|+..+...
T Consensus 117 ~~~f~~~-~~~~--~-~~~~~E~~~~~W~~~~el~~~~~~~------------~~~~~~~l~~~~~~~~~~ 171 (180)
T 2fkb_A 117 GALFSCV-SHGP--F-ALQEDEVSEVCWLTPEEITARCDEF------------TPDSLKALALWMKRNAKN 171 (180)
T ss_dssp EEEEEEE-CCCC--C-CCCTTTEEEEEEECHHHHHTTGGGB------------CHHHHHHHHHHHHHC---
T ss_pred EEEEEEe-cCCC--c-CCChhHhheEEEecHHHHHHHHHHh------------CCcHHHHHHHHHHhhcCC
Confidence 5666665 3322 1 2346889999999999998742111 123345566677665444
No 37
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.71 E-value=1.4e-17 Score=147.20 Aligned_cols=110 Identities=20% Similarity=0.366 Sum_probs=77.2
Q ss_pred ccEEEEEEEeCCCCEEEEEEeeC----CCcEEcccccCC-CCCCHHHHHHHHHHHHhCCcccceeeeeeeee-cccCeEE
Q 020742 107 VPVTGAIILDETYERCILVKGWK----GSSWSFPRGKKN-KDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIFGQQR 180 (322)
Q Consensus 107 v~v~g~Iv~~~~~~kvLLvrr~~----~~~w~fPgG~ie-~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~-~~~~~~~ 180 (322)
..++++++++.+ ++|||+++++ .+.|+||||+++ .||++.+||+||++||||+++..+..+..+.. .......
T Consensus 43 ~~av~v~i~~~~-~~vLLvrr~r~~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 121 (207)
T 1mk1_A 43 FGAVAIVAMDDN-GNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVLVDLDTAPGFSDES 121 (207)
T ss_dssp CCEEEEEECCTT-SEEEEEEEEETTTTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEEEEEEEEEEECSCTTTBCCC
T ss_pred CCEEEEEEEcCC-CEEEEEEeecCCCCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCCcccccEEEEEEEcCCCccccE
Confidence 356777777766 4999999875 468999999999 99999999999999999999987665554422 2333346
Q ss_pred EEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 181 VRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 181 ~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
+++|++............+++|+.++.|++++++.++
T Consensus 122 ~~~f~~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~ 158 (207)
T 1mk1_A 122 VRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARR 158 (207)
T ss_dssp EEEEEEEEEEECCC----------CEEEEEHHHHHHH
T ss_pred EEEEEEEccccCCCCCCCCCCceEEEEEEEHHHHHHH
Confidence 7778776554432211134678899999999999884
No 38
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.71 E-value=3.7e-17 Score=142.49 Aligned_cols=105 Identities=21% Similarity=0.267 Sum_probs=74.7
Q ss_pred ccEEEEEEEeCCCCEEEEEEeeCCCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeee--eeecccC----eEE
Q 020742 107 VPVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDE--FIEKIFG----QQR 180 (322)
Q Consensus 107 v~v~g~Iv~~~~~~kvLLvrr~~~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~--~~~~~~~----~~~ 180 (322)
..+++++|.++ ++|||++|...|.|.||||+++.||++.+||+||++||||+++.....+.. +...... ...
T Consensus 4 ~~v~~~vi~~~--~~vLL~~r~~~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (188)
T 3fk9_A 4 QRVTNCIVVDH--DQVLLLQKPRRGWWVAPGGKMEAGESILETVKREYWEETGITVKNPELKGIFSMVIFDEGKIVSEWM 81 (188)
T ss_dssp CEEEEEEEEET--TEEEEEECTTTCCEECCEEECCTTCCHHHHHHHHHHHHHSCEESSCEEEEEEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEEEC--CEEEEEEeCCCCeEECCeecccCCCCHHHHHHHHHHHHHCCCCCCceEEEEEEEEecCCCcceEEEE
Confidence 34666777765 399999987789999999999999999999999999999999886444333 2221111 114
Q ss_pred EEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 181 VRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 181 ~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
+.+|.+....+. +....|..++.|+++++++.+
T Consensus 82 ~~~f~a~~~~~~----~~~~~e~~~~~W~~~~el~~~ 114 (188)
T 3fk9_A 82 LFTFKATEHEGE----MLKQSPEGKLEWKKKDEVLEL 114 (188)
T ss_dssp EEEEEESCEESC----CCSEETTEEEEEEEGGGGGGS
T ss_pred EEEEEEECCCCC----CcCCCCCEeEEEEEHHHhhhC
Confidence 455555433332 223345578999999999874
No 39
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.71 E-value=1.5e-16 Score=134.77 Aligned_cols=104 Identities=17% Similarity=0.144 Sum_probs=68.0
Q ss_pred cEEEEEEEeCCCCEEEEEEeeC-----CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeee--------eeeec
Q 020742 108 PVTGAIILDETYERCILVKGWK-----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKD--------EFIEK 174 (322)
Q Consensus 108 ~v~g~Iv~~~~~~kvLLvrr~~-----~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~--------~~~~~ 174 (322)
.++++|+.+ + ++|||++|.. .|.|+||||+++.||++.+||+||++||||+++.....+. .+...
T Consensus 29 ~~~~~ii~~-~-~~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~ 106 (165)
T 3oga_A 29 TIVCPLIQN-D-GCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSDITPWTFRDDIRIKTYA 106 (165)
T ss_dssp EEEEEEEEE-T-TEEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEEEEEEEEEEEEEEEEEC-
T ss_pred EEEEEEEeC-C-CEEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCccccceeeeeeecceeeEecC
Confidence 344444444 4 4999999864 3899999999999999999999999999999987532221 11111
Q ss_pred ccCe--E--EEEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 175 IFGQ--Q--RVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 175 ~~~~--~--~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
.... . .+.+|.+...... +...+|+.++.|++++++.++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~E~~~~~W~~~~el~~~ 149 (165)
T 3oga_A 107 DGRQEEIYMIYLIFDCVSANRD----ICINDEFQDYAWVKPEELALY 149 (165)
T ss_dssp -CCEEEEEEEEEEEEEEESCCC----CCCCTTEEEEEEECGGGGGGS
T ss_pred CCCceeEEEEEEEEEeeccCCC----ccCCchheeeEEccHHHHhhC
Confidence 1111 1 1223333322222 223478999999999999874
No 40
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.71 E-value=2.8e-17 Score=136.01 Aligned_cols=107 Identities=17% Similarity=0.144 Sum_probs=75.2
Q ss_pred cccEEEEEEEeCCCCEEEEEEeeCCCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeee---eec-c-c--Ce
Q 020742 106 RVPVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEF---IEK-I-F--GQ 178 (322)
Q Consensus 106 ~v~v~g~Iv~~~~~~kvLLvrr~~~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~---~~~-~-~--~~ 178 (322)
....+++||++++.++|||++|. .|.|.||||+++.||++.+||+||++||||+++.....+..+ ... . . .+
T Consensus 17 ~~~~~~~vi~~~~~~~vLl~~r~-~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (148)
T 2azw_A 17 TRYAAYIIVSKPENNTMVLVQAP-NGAYFLPGGEIEGTETKEEAIHREVLEELGISVEIGCYLGEADEYFYSNHRQTAYY 95 (148)
T ss_dssp ECCEEEEECEEGGGTEEEEEECT-TSCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETTTTEEEE
T ss_pred eeeEEEEEEECCCCCeEEEEEcC-CCCEeCCCcccCCCCCHHHHHHHHHHHHhCCeeEeeeEEEEEEEEEcCCCCCcceE
Confidence 34456677777633599999974 689999999999999999999999999999998765444332 111 1 1 12
Q ss_pred EEEEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 179 QRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 179 ~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
..+.+|.+...... ....+|+.++.|++++++.++
T Consensus 96 ~~~~~~~~~~~~~~----~~~~~e~~~~~W~~~~el~~~ 130 (148)
T 2azw_A 96 NPGYFYVANTWRQL----SEPLERTNTLHWVAPEEAVRL 130 (148)
T ss_dssp EEEEEEEEEEEEEC----SSCC-CCSEEEEECHHHHHHH
T ss_pred EEEEEEEEEcCcCC----cCCCCceeeEEEeeHHHHHhh
Confidence 34556666544332 223467789999999999873
No 41
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.71 E-value=8.5e-18 Score=145.94 Aligned_cols=122 Identities=20% Similarity=0.259 Sum_probs=76.7
Q ss_pred HHHhhh--cCCcccc-cEEEEEEEe--CC----CCEEEEEEee----------CCCcEEcccccCCCCCCHHHHHHHHHH
Q 020742 95 DIFKDF--TSYKVRV-PVTGAIILD--ET----YERCILVKGW----------KGSSWSFPRGKKNKDEEDHACAIREVQ 155 (322)
Q Consensus 95 ~~~~~~--~~y~~~v-~v~g~Iv~~--~~----~~kvLLvrr~----------~~~~w~fPgG~ie~gEs~~eaA~REv~ 155 (322)
+++..| ..|++.. .+++++|+. ++ .++|||++|. ..|.|.||||+++.||++.+||+||++
T Consensus 12 ~~~~~~~~~~~~~p~~~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~ 91 (187)
T 3i9x_A 12 DALKNYNAKEFRTPDGYTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELE 91 (187)
T ss_dssp -----------CCCSEEEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHH
T ss_pred HHhccCCHhHcCCcccceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHH
Confidence 445555 5566544 555555543 22 2489999993 278999999999999999999999999
Q ss_pred HHhCCcccceeeeeeeeecc---cCeEEEEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 156 EETGFDVSKLLNKDEFIEKI---FGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 156 EETGl~v~~l~~~~~~~~~~---~~~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
||||+++..+..+..+.... .......+|++........ .....+|+.++.|+++++++.+
T Consensus 92 EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~E~~~~~W~~~~el~~~ 155 (187)
T 3i9x_A 92 EETSLTDIPLIPFGVFDKPGRDPRGWIISRAFYAIVPPEALE-KRAAGDDAAEIGLFPMTEALEL 155 (187)
T ss_dssp HHHCCCSCCCEEEEEECCTTSSTTSSEEEEEEEEECCHHHHH-HHHHSTTTTTEEEEEHHHHTTS
T ss_pred HHHCCCCcceEEEEEEcCCccCCCCCEEEEEEEEEEcCcccC-CcCCCCceeEEEEEeHHHcccC
Confidence 99999988766665543322 1223334444432221111 1223577889999999999864
No 42
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.71 E-value=1e-16 Score=132.54 Aligned_cols=110 Identities=19% Similarity=0.225 Sum_probs=76.7
Q ss_pred CcccccEEEEEEEeCCCCEEEEEEeeC-CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccce--eeeee-----e--e
Q 020742 103 YKVRVPVTGAIILDETYERCILVKGWK-GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKL--LNKDE-----F--I 172 (322)
Q Consensus 103 y~~~v~v~g~Iv~~~~~~kvLLvrr~~-~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l--~~~~~-----~--~ 172 (322)
|+..+ ++++++++.+.+++||++|.. .|.|.||||+++.||++.+||+||++||||+++... ..+.. + .
T Consensus 6 ~~~~~-~v~~~i~~~~~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~ 84 (150)
T 2o1c_A 6 YKRPV-SILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIF 84 (150)
T ss_dssp CBCSE-EEEEEEEETTTCEEEEEECSSSTTCEESEEEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCEEEEEEEEEEECC
T ss_pred ccCce-EEEEEEEeCCCCEEEEEEecCCCCceECCccccCCCCCHHHHHHHHHHHHhCCCccccceeEEeeeceeeeeee
Confidence 44443 556777776435999999877 789999999999999999999999999999998752 12211 1 0
Q ss_pred -------ecccCeEEEEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 173 -------EKIFGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 173 -------~~~~~~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
.....+....+|.+.. ..... ....|+.++.|++++++.++
T Consensus 85 ~~~~~~~~~~~~~~~~~~f~~~~-~~~~~---~~~~E~~~~~W~~~~el~~~ 132 (150)
T 2o1c_A 85 SHLRHRYAPGVTRNTESWFCLAL-PHERQ---IVFTEHLAYKWLDAPAAAAL 132 (150)
T ss_dssp GGGGGGBCTTCCEEEEEEEEEEE-SSCCC---CCCSSSSCEEEEEHHHHHHH
T ss_pred cccccccCCCCcceEEEEEEEEc-CCCCC---cChhHhhccEeecHHHHHhh
Confidence 0011235556666644 33211 22378899999999999873
No 43
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.70 E-value=4.8e-17 Score=136.85 Aligned_cols=110 Identities=18% Similarity=0.371 Sum_probs=76.4
Q ss_pred ccEEEEEEEeCCCCEEEEEEeeC-CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeee-eecc---------
Q 020742 107 VPVTGAIILDETYERCILVKGWK-GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEF-IEKI--------- 175 (322)
Q Consensus 107 v~v~g~Iv~~~~~~kvLLvrr~~-~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~-~~~~--------- 175 (322)
..++++++++.+ ++|||++|.. +|.|++|||+++.||++.+||+||++||||+++..+...... ....
T Consensus 14 ~~~v~~~i~~~~-~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (165)
T 1f3y_A 14 RRNVGICLMNND-KKIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVPYWLTYDFPPKVREKL 92 (165)
T ss_dssp CCEEEEEEECTT-SCEEEEEETTEEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCSEEEEEECSSCCBCCCCHHHHHHH
T ss_pred eeeEEEEEECCC-CcEEEEecCCCCCcEECCeeccCCCCCHHHHHHHHHHHhhCCChhhhhcccccceeeecCccccccc
Confidence 346677778776 4999999876 689999999999999999999999999999988654332110 1100
Q ss_pred -------cCeEEEEEEEEEeecCCCCCCCC----CccceeeEEEEeccccccc
Q 020742 176 -------FGQQRVRLYIIAGVRDDTAFAPQ----TKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 176 -------~~~~~~~~y~~~~~~~~~~~~~~----~~~Ei~~~~Wv~ldeL~~~ 217 (322)
...+..++|++............ +.+|+.+++|++++++.++
T Consensus 93 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~ 145 (165)
T 1f3y_A 93 NIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDL 145 (165)
T ss_dssp GGGSCSSCCSCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHH
T ss_pred cccccccccCceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHH
Confidence 01124455655433322122221 3578999999999999884
No 44
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.70 E-value=1.6e-16 Score=131.98 Aligned_cols=105 Identities=19% Similarity=0.262 Sum_probs=75.3
Q ss_pred cccEEEEEEEeCCCCEEEEEEeeC----CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeee-cccCeEE
Q 020742 106 RVPVTGAIILDETYERCILVKGWK----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIFGQQR 180 (322)
Q Consensus 106 ~v~v~g~Iv~~~~~~kvLLvrr~~----~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~-~~~~~~~ 180 (322)
.+.++++|+.++ ++|||++|.. .|.|+||||+++.||++.+||+||+.||||+.+.....+..+.. .......
T Consensus 21 ~~~~~~~i~~~~--~~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~ 98 (153)
T 3ees_A 21 WIPVVAGFLRKD--GKILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGIEAEVGELKLACTHSYGDVGIL 98 (153)
T ss_dssp EEEEEEEEEEET--TEEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECCCEEEEEEEEETTEEEE
T ss_pred eEEEEEEEEEEC--CEEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccCceEEEEEEecCCCeEE
Confidence 345555555544 4999999876 48999999999999999999999999999998876544433222 1222334
Q ss_pred EEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 181 VRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 181 ~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
+.+|.+...... ....|+.++.|++++++.++
T Consensus 99 ~~~~~~~~~~~~-----~~~~e~~~~~W~~~~el~~~ 130 (153)
T 3ees_A 99 ILFYEILYWKGE-----PRAKHHMMLEWIHPEELKHR 130 (153)
T ss_dssp EEEEEECEEESC-----CCCSSSSEEEEECGGGGGGS
T ss_pred EEEEEEEECCCC-----cCCCccceEEEecHHHhhhC
Confidence 555655443332 23577889999999999874
No 45
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.70 E-value=1.1e-16 Score=131.06 Aligned_cols=105 Identities=18% Similarity=0.258 Sum_probs=74.6
Q ss_pred cccEEEEEEEeCCCCEEEEEEeeC----CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeee-cccCeEE
Q 020742 106 RVPVTGAIILDETYERCILVKGWK----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIFGQQR 180 (322)
Q Consensus 106 ~v~v~g~Iv~~~~~~kvLLvrr~~----~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~-~~~~~~~ 180 (322)
.+.++++|+.++ ++|||++|.. .|.|+||||+++.||++.+||+||++||||+.+.....+..+.. .......
T Consensus 8 ~~~~~~~ii~~~--~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~ 85 (140)
T 2rrk_A 8 MIEVVAAIIERD--GKILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVGEYVASHQREVSGRIIH 85 (140)
T ss_dssp EEEEEEEEEEET--TEEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEECCEEEEEEEEEETTEEEE
T ss_pred cceEEEEEEEcC--CEEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCCeeecccEEEEEEEecCCcEEE
Confidence 445556666444 3999999865 59999999999999999999999999999999876544443322 1222334
Q ss_pred EEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 181 VRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 181 ~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
+.+|.+...... + ...|+.++.|++++++.++
T Consensus 86 ~~~~~~~~~~~~----~-~~~e~~~~~W~~~~el~~~ 117 (140)
T 2rrk_A 86 LHAWHVPDFHGT----L-QAHEHQALVWCSPEEALQY 117 (140)
T ss_dssp EEEEEESEEEEC----C-CCSSCSCEEEECHHHHTTS
T ss_pred EEEEEEEeeCCC----c-CCCccceeEEeCHHHHhhC
Confidence 555655433221 2 2467788999999999874
No 46
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.70 E-value=1.6e-16 Score=133.50 Aligned_cols=107 Identities=22% Similarity=0.321 Sum_probs=76.8
Q ss_pred ccccEEEEEEEeCCCCEEEEEEeeC----CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccce--eeeeeeee-cccC
Q 020742 105 VRVPVTGAIILDETYERCILVKGWK----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKL--LNKDEFIE-KIFG 177 (322)
Q Consensus 105 ~~v~v~g~Iv~~~~~~kvLLvrr~~----~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l--~~~~~~~~-~~~~ 177 (322)
..+.++++++++.+ ++|||++|.. .|.|+||||+++.||++.+||+||++||||+.+... ..+..+.. ....
T Consensus 27 ~~~~~~~~~i~~~~-~~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~ 105 (158)
T 3hhj_A 27 SLLIVVACALLDQD-NRVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGVHVQADNLFPLTFASHGYETF 105 (158)
T ss_dssp CEEEEEEEEEBCTT-SEEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSSC
T ss_pred ceEEEEEEEEEeCC-CEEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCcEeecceEEEEEEEeeccCCc
Confidence 34556667777766 4999999875 589999999999999999999999999999998764 23333222 2223
Q ss_pred eEEEEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 178 QQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 178 ~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
...+.+|.+...... + ...|..++.|++++++.++
T Consensus 106 ~~~~~~~~~~~~~~~----~-~~~e~~~~~W~~~~el~~~ 140 (158)
T 3hhj_A 106 HLLMPLYFCSHYKGV----A-QGREGQNLKWIFINDLDKY 140 (158)
T ss_dssp EEEEEEEEESCCBSC----C-CCTTSCEEEEEEGGGGGGS
T ss_pred EEEEEEEEEEECCCc----c-CCccccceEEEcHHHHhhC
Confidence 344555555333321 2 3477889999999999874
No 47
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.70 E-value=1.3e-16 Score=133.74 Aligned_cols=106 Identities=16% Similarity=0.145 Sum_probs=75.0
Q ss_pred cEEEEEEEeCCCCEEEEEEeeC---CCcEEcccccCCCCCCHHHHHHHHHHHHhCCccc--ceeeeeee--eeccc----
Q 020742 108 PVTGAIILDETYERCILVKGWK---GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVS--KLLNKDEF--IEKIF---- 176 (322)
Q Consensus 108 ~v~g~Iv~~~~~~kvLLvrr~~---~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~--~l~~~~~~--~~~~~---- 176 (322)
.++++|+++.+ ++|||++|.. .|.|.||||+++.||++.+||+||++||||+.+. .+..+..+ .....
T Consensus 19 ~~v~~vi~~~~-~~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~ 97 (160)
T 1rya_A 19 VSLDFIVENSR-GEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDNFSGT 97 (160)
T ss_dssp EEEEEEEECTT-SCEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSSCCCGGGSEEEEEEEEEESSBTTBS
T ss_pred EEEEEEEEcCC-CEEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCCCCCcccceEEEEEeEEEcccccCC
Confidence 46677777755 4899999977 6899999999999999999999999999999863 33333222 11110
Q ss_pred --C-eEEEEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 177 --G-QQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 177 --~-~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
. +....+|.+....+. . ....+|+.++.|++++++.++
T Consensus 98 ~~~~~~~~~~f~~~~~~~~--~-~~~~~e~~~~~W~~~~el~~~ 138 (160)
T 1rya_A 98 DFTTHYVVLGFRFRVSEEE--L-LLPDEQHDDYRWLTSDALLAS 138 (160)
T ss_dssp SSCEEEEEEEEEEECCGGG--C-CCCSSSEEEEEEECHHHHHHC
T ss_pred CcCcEEEEEEEEEEcCccc--c-ccCCCccceEEEecHHHHhhc
Confidence 1 344555655433222 1 224578899999999999874
No 48
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.69 E-value=1.2e-16 Score=133.00 Aligned_cols=103 Identities=21% Similarity=0.225 Sum_probs=72.4
Q ss_pred EEEEEeCCCCEEEEEEeeC---CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeee--eecccC-eEEEEEE
Q 020742 111 GAIILDETYERCILVKGWK---GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEF--IEKIFG-QQRVRLY 184 (322)
Q Consensus 111 g~Iv~~~~~~kvLLvrr~~---~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~--~~~~~~-~~~~~~y 184 (322)
++|+.++ ++|||+++.+ .+.|.||||+++.||++.+||+||++||||+++.....+..+ ...... .....+|
T Consensus 12 ~~ii~~~--~~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~f 89 (153)
T 2b0v_A 12 AAVIEQD--DKYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPEVLTGIYHWTCASNGTTYLRFTF 89 (153)
T ss_dssp EEECEET--TEEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEeeC--CEEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEeccceEEEEEEEeCCCCCcEEEEEEE
Confidence 4444444 3999999876 358999999999999999999999999999998765444432 222212 2334456
Q ss_pred EEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 185 IIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 185 ~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
.+....... ......|+.++.|++++++.++
T Consensus 90 ~~~~~~~~~--~~~~~~e~~~~~W~~~~el~~~ 120 (153)
T 2b0v_A 90 SGQVVSFDP--DRKLDTGIVRAAWFSIDEIRAK 120 (153)
T ss_dssp EEEEEEECT--TSCCCTTEEEEEEEEHHHHHHT
T ss_pred EEEeCCCCC--CCCCCCCeeeEEEecHHHHhhh
Confidence 554433221 1234578899999999999874
No 49
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.69 E-value=6.6e-17 Score=145.15 Aligned_cols=116 Identities=21% Similarity=0.201 Sum_probs=82.7
Q ss_pred hcCCcccccEEEEEEE--eCCCCEEEEEEeeC---CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeeec
Q 020742 100 FTSYKVRVPVTGAIIL--DETYERCILVKGWK---GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEK 174 (322)
Q Consensus 100 ~~~y~~~v~v~g~Iv~--~~~~~kvLLvrr~~---~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~~ 174 (322)
+..|.....++++||+ +++.++|||++|.. .|.|.+|||+++.|||+.+||+||++||||+++..+..+..+...
T Consensus 6 ~~~~~~p~v~v~~vi~~~~~~~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~l~~~~~~ 85 (226)
T 2fb1_A 6 YSSNPTFYLGIDCIIFGFNEGEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENVYMEQVGAFGAI 85 (226)
T ss_dssp TTTSCCEEEEEEEEEEEEETTEEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCCSCEEEEEEEECCT
T ss_pred cccCCCCeEEEEEEEEEEeCCCCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCCCceEEEEEeCCC
Confidence 4556665566677776 23345999999976 689999999999999999999999999999999876666655332
Q ss_pred c--cCeEEEE-EEEEEeecCCCCCCCCCccceeeEEEEecccccccC
Q 020742 175 I--FGQQRVR-LYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPAS 218 (322)
Q Consensus 175 ~--~~~~~~~-~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~~ 218 (322)
. .....+. .|++. +.... .+....|+.++.|+++++++++.
T Consensus 86 ~r~~~~~~v~~~y~a~-~~~~~--~~~~~~e~~~~~W~~~~el~~l~ 129 (226)
T 2fb1_A 86 DRDPGERVVSIAYYAL-ININE--YDRELVQKHNAYWVNINELPALI 129 (226)
T ss_dssp TSSSSSCEEEEEEEEE-CCTTS--SCHHHHHHTTEEEEETTSCCCBS
T ss_pred CcCCCceEEEEEEEEE-ecCcc--cccCCccccceEEEEHHHhhhcc
Confidence 2 1223344 45543 33321 12234788899999999998753
No 50
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.68 E-value=4e-16 Score=143.68 Aligned_cols=111 Identities=22% Similarity=0.226 Sum_probs=83.6
Q ss_pred cCCcccccEEEEEEEeCCCCEEEEEEeeC--CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeeecccCe
Q 020742 101 TSYKVRVPVTGAIILDETYERCILVKGWK--GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEKIFGQ 178 (322)
Q Consensus 101 ~~y~~~v~v~g~Iv~~~~~~kvLLvrr~~--~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~~~~~~ 178 (322)
..|....+++.+++.++ ++|||+++.+ .|.|++|||++|.|||+++||+||++||||+++..+..+..+. ..+.+
T Consensus 134 ~~yp~~~~~viv~v~~~--~~vLL~rr~~~~~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~~~~~~~~~~-~~~~~ 210 (269)
T 1vk6_A 134 RYYPQIAPCIIVAIRRD--DSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQP-WPFPQ 210 (269)
T ss_dssp EECCCCEEEEEEEEEET--TEEEEEEETTTCSSCCBCEEEECCTTCCHHHHHHHHHHHHHCCEEEEEEEEEEEE-EETTE
T ss_pred EecCCCCcEEEEEEEeC--CEEEEEEecCCCCCcEECCcCcCCCCCCHHHHHHHHHHHHhCceeeeEEEEEEEe-cCCCC
Confidence 44555555555555554 4999999876 6899999999999999999999999999999998766665542 23445
Q ss_pred EEEEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 179 QRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 179 ~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
..+..|.+....+. . ..+.+|+.++.|+++++++.+
T Consensus 211 ~~~~~f~a~~~~~~--~-~~~~~E~~~~~W~~~~el~~l 246 (269)
T 1vk6_A 211 SLMTAFMAEYDSGD--I-VIDPKELLEANWYRYDDLPLL 246 (269)
T ss_dssp EEEEEEEEEEEECC--C-CCCTTTEEEEEEEETTSCCSC
T ss_pred EEEEEEEEEECCCC--c-CCCCcceEEEEEEEHHHhhhc
Confidence 56667777554433 1 234678999999999999875
No 51
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.68 E-value=5.1e-16 Score=133.65 Aligned_cols=103 Identities=19% Similarity=0.282 Sum_probs=73.4
Q ss_pred EEEEEEEeCCCCEEEEEEeeC---CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeee--ccc-CeEEEE
Q 020742 109 VTGAIILDETYERCILVKGWK---GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE--KIF-GQQRVR 182 (322)
Q Consensus 109 v~g~Iv~~~~~~kvLLvrr~~---~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~--~~~-~~~~~~ 182 (322)
++++++++.+ ++|||++|.+ .|.|.||||+++.||++.+||+||++||||+++..+..+..+.. ... ....+.
T Consensus 26 ~~~~~vi~~~-~~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~ 104 (176)
T 3q93_A 26 LYTLVLVLQP-QRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVH 104 (176)
T ss_dssp EEEEEEEECS-SEEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESCCEEEEEEEEEETTCSCEEEEE
T ss_pred EEEEEEEEeC-CEEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCCcceeeEEEEEEEEEcCCCCcEEEEE
Confidence 3344444444 4999999866 68999999999999999999999999999999987655554322 111 233456
Q ss_pred EEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 183 LYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 183 ~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
+|.+....+. +. ..|..++.|+++++++.+
T Consensus 105 ~f~~~~~~~~----~~-~~e~~~~~W~~~~el~~~ 134 (176)
T 3q93_A 105 VFCTDSIQGT----PV-ESDEMRPCWFQLDQIPFK 134 (176)
T ss_dssp EEEESCEESC----CC-CCSSEEEEEEETTCCCGG
T ss_pred EEEEECCCCC----cC-CCcceeeEEeeHHHcccc
Confidence 6666434332 22 345677899999999863
No 52
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.68 E-value=4.3e-16 Score=132.84 Aligned_cols=98 Identities=24% Similarity=0.400 Sum_probs=69.5
Q ss_pred cccEEEEEEEeCCCCEEEEEEeeCCCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeeecccCeEEEEEEE
Q 020742 106 RVPVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEKIFGQQRVRLYI 185 (322)
Q Consensus 106 ~v~v~g~Iv~~~~~~kvLLvrr~~~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~~~~~~~~~~~y~ 185 (322)
.+.++++|+.+++ ++||+++. .|.|.||||+++.||++.+||+||++||||+++..+..+..+.... ....+|+
T Consensus 15 ~~~~~~~ii~~~~--~vLL~~r~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~---~~~~~f~ 88 (163)
T 3f13_A 15 LARRATAIIEMPD--GVLVTASR-GGRYNLPGGKANRGELRSQALIREIREETGLRINSMLYLFDHITPF---NAHKVYL 88 (163)
T ss_dssp CEEEEEEECEETT--EEEEEECC----BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCEEEEEEEEECSS---EEEEEEE
T ss_pred ceEEEEEEEEeCC--EEEEEEEC-CCeEECCceeCCCCCCHHHHHHHHHHHHHCcccceeEEEEEEecCC---eEEEEEE
Confidence 3445555556553 89999986 6899999999999999999999999999999998766665543322 5556666
Q ss_pred EEeecCCCCCCCCCccceeeEEEEecccc
Q 020742 186 IAGVRDDTAFAPQTKKEISEIAWQRLDEL 214 (322)
Q Consensus 186 ~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL 214 (322)
+. ..+. +...+|+.++.|++.+.+
T Consensus 89 ~~-~~~~----~~~~~E~~~~~W~~~~~~ 112 (163)
T 3f13_A 89 CI-AQGQ----PKPQNEIERIALVSSPDT 112 (163)
T ss_dssp EE-C-CC----CCCCTTCCEEEEESSTTC
T ss_pred EE-ECCc----CccCCCceEEEEECcccc
Confidence 63 4332 223358899999995444
No 53
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.68 E-value=2.3e-16 Score=131.94 Aligned_cols=104 Identities=19% Similarity=0.233 Sum_probs=71.7
Q ss_pred EEEEEEEeCCCCEEEEEEeeCCCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeee--eeecccC---eEEEEE
Q 020742 109 VTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDE--FIEKIFG---QQRVRL 183 (322)
Q Consensus 109 v~g~Iv~~~~~~kvLLvrr~~~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~--~~~~~~~---~~~~~~ 183 (322)
++++||+++ ++|||++| .+.|.||||+++.||++.+||+||++||||+++.....+.. +.....+ +....+
T Consensus 21 ~~~~ii~~~--~~vLl~~r--~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (154)
T 2pqv_A 21 RATALIVQN--HKLLVTKD--KGKYYTIGGAIQVNESTEDAVVREVKEELGVKAQAGQLAFVVENRFEVDGVSYHNIEFH 96 (154)
T ss_dssp EEEECCEET--TEEEEEEE--TTEEECEEEECBTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEEC--CEEEEEec--CCeEECcccCcCCCCCHHHHHHHHHHHHhCCeeeeceEEEEEeeeecCCCCcceEEEEE
Confidence 455666664 39999999 68999999999999999999999999999999875433322 1111111 123344
Q ss_pred EEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 184 YIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 184 y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
|.+.. ...........+|+.++.|++++++..+
T Consensus 97 f~~~~-~~~~~~~~~~~~e~~~~~W~~~~el~~~ 129 (154)
T 2pqv_A 97 YLVDL-LEDAPLTMQEDEKRQPCEWIDLDKLQNI 129 (154)
T ss_dssp EEEEE-SSCCCSEEEETTEEEEEEEEEGGGGGGS
T ss_pred EEEEe-cCCCCcccCCCCceeeEEEeEHHHHhhc
Confidence 55543 3322211223567889999999999874
No 54
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.67 E-value=2.9e-16 Score=132.06 Aligned_cols=56 Identities=27% Similarity=0.455 Sum_probs=49.3
Q ss_pred cEEEEEEEeCCCCEEEEEEeeCCCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccce
Q 020742 108 PVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKL 165 (322)
Q Consensus 108 ~v~g~Iv~~~~~~kvLLvrr~~~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l 165 (322)
.++++||+++ ++|||+++...|.|.||||+++.||++.+||+||++||||+++...
T Consensus 2 ~~~~~vi~~~--~~vLL~~r~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~ 57 (156)
T 1k2e_A 2 IVTSGVLVEN--GKVLLVKHKRLGVYIYPGGHVEHNETPIEAVKREFEEETGIVVEPI 57 (156)
T ss_dssp EEEEEECEET--TEEEEEECTTTCSEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEC
T ss_pred eEEEEEEEEC--CEEEEEEEcCCCcEECCeeecCCCCCHHHHHHHHHHHHHCCcceec
Confidence 3567777773 4999999877899999999999999999999999999999988754
No 55
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.67 E-value=5.6e-17 Score=142.28 Aligned_cols=105 Identities=19% Similarity=0.296 Sum_probs=72.6
Q ss_pred EEEEEE-eCCCCEEEEEEeeC-CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeeecccCeEEEEEEEEE
Q 020742 110 TGAIIL-DETYERCILVKGWK-GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIEKIFGQQRVRLYIIA 187 (322)
Q Consensus 110 ~g~Iv~-~~~~~kvLLvrr~~-~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~~~~~~~~~~~y~~~ 187 (322)
+++|++ +++.++|||++|.+ ++.|+||||+++.||++.+||+||++||||+++.....+..+... .......+|++.
T Consensus 43 ~~~vi~~~~~~~~vLLv~r~~~~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~l~~~~~~-~~~~~~~~f~~~ 121 (194)
T 2fvv_A 43 AACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQ-ERKHRTYVYVLI 121 (194)
T ss_dssp EEEEEESSTTCCEEEEEECSSCTTSEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEEEEEEEET-TTTEEEEEEEEE
T ss_pred EEEEEEEECCCCEEEEEEEeCCCCcEECCCCcCCCCcCHHHHHHHHHHHHhCCccccceEEEEEEcC-CCceEEEEEEEE
Confidence 344444 34345999999876 789999999999999999999999999999998876555554332 233455666654
Q ss_pred eecCCCCCCCCCccceeeEEEEecccccc
Q 020742 188 GVRDDTAFAPQTKKEISEIAWQRLDELQP 216 (322)
Q Consensus 188 ~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~ 216 (322)
........ .....+..++.|++++++++
T Consensus 122 ~~~~~~~~-~~~~e~~~~~~W~~~~el~~ 149 (194)
T 2fvv_A 122 VTEVLEDW-EDSVNIGRKREWFKIEDAIK 149 (194)
T ss_dssp EEEECSSC-HHHHHHCCCEEEEEHHHHHH
T ss_pred EccccCCC-CCcccccceEEEEEHHHHHH
Confidence 22211110 11112346899999999986
No 56
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.67 E-value=2.4e-16 Score=131.82 Aligned_cols=110 Identities=20% Similarity=0.224 Sum_probs=74.9
Q ss_pred CCcccccEEEEEEEeCCCCE--EEEEEeeC---CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeee--eec
Q 020742 102 SYKVRVPVTGAIILDETYER--CILVKGWK---GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEF--IEK 174 (322)
Q Consensus 102 ~y~~~v~v~g~Iv~~~~~~k--vLLvrr~~---~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~--~~~ 174 (322)
++.....++++||.+++.++ +||++|.. .| |.||||+++.||++.+||+||++||||+++.....+..+ ...
T Consensus 3 r~~~~~~~~~~ii~~~~~~~~~vLl~~r~~~~~~g-w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~ 81 (155)
T 2b06_A 3 RSQLTILTNICLIEDLETQRVVMQYRAPENNRWSG-YAFPGGHVENDEAFAESVIREIYEETGLTIQNPQLVGIKNWPLD 81 (155)
T ss_dssp GGGCEEEEEEEEEEETTTTEEEEEEEC-----CCE-EECCCCBCCTTSCHHHHHHHHHHHHHSEEEESCEEEEEEEEECT
T ss_pred CCcCcEEEEEEEEEECCCCeEEEEEEECCCCCCCC-EeccceecCCCCCHHHHHHHHHHHHhCccccCCcEEEEEeeccC
Confidence 34455567778888764222 88888765 34 899999999999999999999999999998765444332 221
Q ss_pred ccCeEEEEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 175 IFGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 175 ~~~~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
......+.+|.+....+. + ...|+.++.|++++++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~----~-~~~e~~~~~W~~~~el~~~ 119 (155)
T 2b06_A 82 TGGRYIVICYKATEFSGT----L-QSSEEGEVSWVQKDQIPNL 119 (155)
T ss_dssp TSCEEEEEEEEECEEEEC----C-CCBTTBEEEEEEGGGGGGS
T ss_pred CCceEEEEEEEEEecCCC----C-CCCcceeeEEeeHHHhhhC
Confidence 123445566665443322 2 2367789999999999874
No 57
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.66 E-value=9.4e-17 Score=129.56 Aligned_cols=102 Identities=20% Similarity=0.260 Sum_probs=73.0
Q ss_pred EEEEEEeCCCCEEEEEEeeC----CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeee-cccCeEEEEEE
Q 020742 110 TGAIILDETYERCILVKGWK----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIFGQQRVRLY 184 (322)
Q Consensus 110 ~g~Iv~~~~~~kvLLvrr~~----~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~-~~~~~~~~~~y 184 (322)
++++|++.+ ++|||++|.. .|.|+||||+++.||++.+||+||++||||+.+.....+..+.. .......+++|
T Consensus 7 ~~~ii~~~~-~~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (129)
T 1mut_A 7 AVGIIRNEN-NEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHFSLFEKLEYEFPDRHITLWFW 85 (129)
T ss_dssp CCEECEETT-TEEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEECCCCCCBCCCSSCEEECCCE
T ss_pred EEEEEEecC-CEEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccceEEEEEEEecCCceEEEEEE
Confidence 345555665 4999999876 49999999999999999999999999999999876544433221 12223344566
Q ss_pred EEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 185 IIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 185 ~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
.+...... + ...|+.++.|++++++.++
T Consensus 86 ~~~~~~~~----~-~~~e~~~~~W~~~~el~~~ 113 (129)
T 1mut_A 86 LVERWEGE----P-WGKEGQPGEWMSLVGLNAD 113 (129)
T ss_dssp EEEECSSC----C-CCCSSCCCEEEESSSCCTT
T ss_pred EEEccCCc----c-CCcccceeEEeCHHHcccc
Confidence 66543321 2 2467788999999999874
No 58
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.66 E-value=2.2e-16 Score=137.50 Aligned_cols=109 Identities=19% Similarity=0.164 Sum_probs=77.7
Q ss_pred cEEEEEEEeCCCC-EEEEEEeeC-----CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeeeee-cccCeEE
Q 020742 108 PVTGAIILDETYE-RCILVKGWK-----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEFIE-KIFGQQR 180 (322)
Q Consensus 108 ~v~g~Iv~~~~~~-kvLLvrr~~-----~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~~~-~~~~~~~ 180 (322)
..+++|+++.+++ +|||++|.. .|.|+||||+++.||++.+||+||++||||+++..+..+..+.. ....+..
T Consensus 35 ~~~~~v~i~~~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~ 114 (194)
T 1nqz_A 35 RAAVLVALTREADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPAAVTLLGELDDVFTPVGFH 114 (194)
T ss_dssp EEEEEEEEESSSSCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCGGGCEEEEECCCEEETTTEE
T ss_pred eEEEEEEEecCCCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCCccceEEEEEccCccCCCCeE
Confidence 3445555555422 899999863 68999999999999999999999999999999987655554322 2233456
Q ss_pred EEEEEEEeecCCCCCCCCCccceeeEEEEecccc-ccc
Q 020742 181 VRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDEL-QPA 217 (322)
Q Consensus 181 ~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL-~~~ 217 (322)
+++|++... ........+.+|+.++.|++++++ ++.
T Consensus 115 ~~~f~~~~~-~~~~~~~~~~~E~~~~~W~~~~el~~~~ 151 (194)
T 1nqz_A 115 VTPVLGRIA-PEALDTLRVTPEVAQIITPTLAELRAVP 151 (194)
T ss_dssp EEEEEEEEC-GGGGGGCCCCTTEEEEECCBHHHHHHSC
T ss_pred EEEEEEEec-CCccccCCCccceeEEEEEEHHHhccCC
Confidence 677766543 221101235688999999999999 763
No 59
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.65 E-value=5.8e-16 Score=137.27 Aligned_cols=110 Identities=22% Similarity=0.292 Sum_probs=76.9
Q ss_pred cEEEEEEE--eCC-CCEEEEEEeeC----CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeeee-eecccCeE
Q 020742 108 PVTGAIIL--DET-YERCILVKGWK----GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDEF-IEKIFGQQ 179 (322)
Q Consensus 108 ~v~g~Iv~--~~~-~~kvLLvrr~~----~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~~-~~~~~~~~ 179 (322)
.+++++.+ +++ .++|||+++++ .+.|+||||++++||++.+||+||++||||+.+..+..+..+ ..+...+.
T Consensus 62 ~av~v~~v~~~~~~~~~vlLv~q~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~ 141 (212)
T 2dsc_A 62 DGVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSNC 141 (212)
T ss_dssp SEEEEEEEEECTTSCCEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEECCCEESCTTTBCC
T ss_pred CEEEEEEEEeCCCCCcEEEEEEeecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCCCccceEEeccEEcCCCccCc
Confidence 44455433 321 24899999765 458999999999999999999999999999998765544333 23344556
Q ss_pred EEEEEEEEeecCCC----CCCCCCccceeeEEEEeccccccc
Q 020742 180 RVRLYIIAGVRDDT----AFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 180 ~~~~y~~~~~~~~~----~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
.+++|++....... .....+++|+.++.|++++++.++
T Consensus 142 ~~~~~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~ 183 (212)
T 2dsc_A 142 TIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQR 183 (212)
T ss_dssp EEEEEEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHH
T ss_pred eEEEEEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHH
Confidence 67777765322111 011235678999999999999874
No 60
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.65 E-value=2.9e-16 Score=133.71 Aligned_cols=105 Identities=14% Similarity=0.103 Sum_probs=78.2
Q ss_pred ccEEEEEEEeCCCCEEEEEEeeC-----CCcEE-cccccCCCCCCHHHHHHHHHHHHhCCcccc--eeeeeeee-ecccC
Q 020742 107 VPVTGAIILDETYERCILVKGWK-----GSSWS-FPRGKKNKDEEDHACAIREVQEETGFDVSK--LLNKDEFI-EKIFG 177 (322)
Q Consensus 107 v~v~g~Iv~~~~~~kvLLvrr~~-----~~~w~-fPgG~ie~gEs~~eaA~REv~EETGl~v~~--l~~~~~~~-~~~~~ 177 (322)
..++++++++.++ +|||++|.. .|.|+ ||||+++.||++.+||+||++||||+++.. +..+..+. .....
T Consensus 34 ~~~v~v~i~~~~~-~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~~ 112 (171)
T 1q27_A 34 VRVVNAFLRNSQG-QLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDALSWRPLASFSPFQTTL 112 (171)
T ss_dssp CEEEEEEEEETTT-EEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSSSCEEEEEEECSSSSCC
T ss_pred ceEEEEEEECCCC-eEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCcccccceEEEEEEeccCCCC
Confidence 4567778887764 999999854 58898 999999999999999999999999999876 45555543 22222
Q ss_pred eEEEEEEEEEeecCCCCCCCCCccceeeEEEEecccccc
Q 020742 178 QQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQP 216 (322)
Q Consensus 178 ~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~ 216 (322)
...+++|.+.. .+. ..+ +..|+.++.|++++++.+
T Consensus 113 ~~~~~~f~~~~-~~~--~~~-~~~E~~~~~W~~~~el~~ 147 (171)
T 1q27_A 113 SSFMCVYELRS-DAT--PIF-NPNDISGGEWLTPEHLLA 147 (171)
T ss_dssp SSEEEEEEEEC-CCC--CCS-CTTTCSCCEEECHHHHHH
T ss_pred ccEEEEEEEEE-CCc--ccc-CchhhheEEEecHHHHHH
Confidence 23566676654 322 222 457888999999999986
No 61
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.64 E-value=1.5e-15 Score=127.24 Aligned_cols=106 Identities=16% Similarity=0.228 Sum_probs=71.7
Q ss_pred ccEEEEEEEeCC--CCEEEEEEeeC----CCcEEcccccCCCCCCHH-HHHHHHHHHHhC-Ccccceeeeeeeee-cccC
Q 020742 107 VPVTGAIILDET--YERCILVKGWK----GSSWSFPRGKKNKDEEDH-ACAIREVQEETG-FDVSKLLNKDEFIE-KIFG 177 (322)
Q Consensus 107 v~v~g~Iv~~~~--~~kvLLvrr~~----~~~w~fPgG~ie~gEs~~-eaA~REv~EETG-l~v~~l~~~~~~~~-~~~~ 177 (322)
...+++||.+++ .++|||++|.. .|.|+||||+++.||++. +||+||+.|||| +++.....+..+.. ....
T Consensus 19 ~~~~~~vi~~~~~~~~~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~~~l~~~~~~~~~~ 98 (155)
T 1x51_A 19 ESSATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTFSHI 98 (155)
T ss_dssp EEEEEEEEEEECSSSEEEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTCEECCCBCCBCSSC
T ss_pred EEEEEEEEEecCCCCCEEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhCCcceeeeeecceEEEecCCc
Confidence 334445555431 24999999875 589999999999999996 999999999999 88765444433211 1222
Q ss_pred eEEEEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 178 QQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 178 ~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
...+++|.+....+. + ...|..++.|++++++.++
T Consensus 99 ~~~~~~~~~~~~~~~----~-~~~e~~~~~W~~~~el~~~ 133 (155)
T 1x51_A 99 KLTYQVYGLALEGQT----P-VTTVPPGARWLTQEEFHTA 133 (155)
T ss_dssp EEEEEEEEEECSSCC----C-CCCCCTTEEEEEHHHHHHS
T ss_pred cEEEEEEEEEEcCCC----C-CCCCCCccEEccHHHhhhc
Confidence 344566665432221 2 2345678999999999874
No 62
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.63 E-value=1.1e-15 Score=132.71 Aligned_cols=105 Identities=10% Similarity=0.203 Sum_probs=76.7
Q ss_pred cEEEEEEEeCCCCEEEEEEeeC-----CCcEEc-ccccCCCCCCHHHHHHHHHHHHhCCcccce-eeeeeeee---cc--
Q 020742 108 PVTGAIILDETYERCILVKGWK-----GSSWSF-PRGKKNKDEEDHACAIREVQEETGFDVSKL-LNKDEFIE---KI-- 175 (322)
Q Consensus 108 ~v~g~Iv~~~~~~kvLLvrr~~-----~~~w~f-PgG~ie~gEs~~eaA~REv~EETGl~v~~l-~~~~~~~~---~~-- 175 (322)
.+++++|++.++ +|||++|.. .|.|+| |||+++.||++.+||+||++||||+++..+ ..+..+.. ..
T Consensus 33 ~~v~~~i~~~~g-~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~ 111 (190)
T 1hzt_A 33 LAFSSWLFNAKG-QLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPDFRYRATDPSG 111 (190)
T ss_dssp ECEEEEEECTTC-CEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCCEEEETTCEEEEECTTS
T ss_pred EEEEEEEEcCCC-EEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchhhheeeeeEEEEeeCCCC
Confidence 356778887664 899999864 589999 999999999999999999999999998876 44433221 11
Q ss_pred c-CeEEEEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 176 F-GQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 176 ~-~~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
. ......+|.+. ..+. ..+ +.+|+.++.|++++++.++
T Consensus 112 ~~~~~~~~~f~~~-~~~~--~~~-~~~E~~~~~W~~~~el~~~ 150 (190)
T 1hzt_A 112 IVENEVCPVFAAR-TTSA--LQI-NDDEVMDYQWCDLADVLHG 150 (190)
T ss_dssp CEEEEECCEEEEE-BCSC--CCC-CTTTEEEEEEECHHHHHHH
T ss_pred CcceEEEEEEEEe-cCCC--CcC-CccceeeEEEecHHHHHHH
Confidence 1 13344566554 4432 222 4678999999999999874
No 63
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.62 E-value=1.7e-15 Score=144.87 Aligned_cols=99 Identities=23% Similarity=0.321 Sum_probs=69.3
Q ss_pred CCEEEEEEeeCCCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceeeeee--eeeccc------------CeEEEEEE
Q 020742 119 YERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLNKDE--FIEKIF------------GQQRVRLY 184 (322)
Q Consensus 119 ~~kvLLvrr~~~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~~~~--~~~~~~------------~~~~~~~y 184 (322)
..+|||+++...+.|+||||+++.||++.+||+||++||||+++.....+.. +..... ....+++|
T Consensus 37 ~~~vLLv~r~~~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~f 116 (364)
T 3fjy_A 37 SIEVCIVHRPKYDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKLGPYLCEVEYPLSEEGKKTRHSHDCTADTKHTLYW 116 (364)
T ss_dssp TEEEEEEEETTTTEEECCEEECCTTCCHHHHHHHHHHHHHSCCEEEEEEEEEEC---------------------CEEEE
T ss_pred ceEEEEEEcCCCCCEECCcCCCCCCCCHHHHHHHHHHHHhCCeeeeccccceEEEeccCCCcccccccccccCceEEEEE
Confidence 3499999997789999999999999999999999999999999876444432 211110 13455666
Q ss_pred EEEeecCCC---------CCCCCCccceeeEEEEeccccccc
Q 020742 185 IIAGVRDDT---------AFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 185 ~~~~~~~~~---------~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
.+....+.. .....+.+|+.++.|++++++.++
T Consensus 117 ~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~ 158 (364)
T 3fjy_A 117 MAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKI 158 (364)
T ss_dssp EEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHH
T ss_pred EEEecCCccccccccccCccccCCccceeeeecCcHHHHHHH
Confidence 665443310 111234688999999999999874
No 64
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.62 E-value=4.6e-15 Score=136.77 Aligned_cols=110 Identities=20% Similarity=0.350 Sum_probs=78.2
Q ss_pred CcccccEEEEEEEe--CC--CCEEEEEEeeC---CCcEEcccccCCCCCCHHHHHHHHHHHHhCCccc--ceeeeeeeee
Q 020742 103 YKVRVPVTGAIILD--ET--YERCILVKGWK---GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVS--KLLNKDEFIE 173 (322)
Q Consensus 103 y~~~v~v~g~Iv~~--~~--~~kvLLvrr~~---~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~--~l~~~~~~~~ 173 (322)
|.....++++||+. ++ .++|||++|.. .|.|.||||+++.||++.+||+||++||||+++. .+..+..+..
T Consensus 35 ~~~p~v~v~~vv~~~~~~~~~~~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~~~~l~~l~~~~~ 114 (273)
T 2fml_A 35 YEKPSLTVDMVLLCYNKEADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQENIEQLHSFSR 114 (273)
T ss_dssp CCCCEEEEEEEEEEEETTTTEEEEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHCCCCCGGGEEEEEEECC
T ss_pred CCCCceEEEEEEEEEcCCCCCcEEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCCCcCcEEEEEEEcC
Confidence 66655566666654 32 34899999976 5899999999999999999999999999997655 3555555543
Q ss_pred ccc---CeEEEEEEEEEeecCCCCCCCCCccceeeEEEEecccccc
Q 020742 174 KIF---GQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQP 216 (322)
Q Consensus 174 ~~~---~~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~ 216 (322)
... .+....+|++. +.... ....+|+.++.|++++++..
T Consensus 115 ~~r~~~~~~~~~~y~a~-~~~~~---~~~~~E~~~~~W~~~~e~~~ 156 (273)
T 2fml_A 115 PDRDPRGWVVTVSYLAF-IGEEP---LIAGDDAKEVHWFNLERHGQ 156 (273)
T ss_dssp TTSSTTSSEEEEEEEEE-CCCCC---CCCCTTEEEEEEEEEEEETT
T ss_pred CCCCCCceEEEEEEEEE-eCCCC---CCCCcceeeEEEEEhhHhhh
Confidence 221 23444555553 43322 34467889999999998654
No 65
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.61 E-value=5.7e-15 Score=139.94 Aligned_cols=114 Identities=16% Similarity=0.232 Sum_probs=79.9
Q ss_pred CCcccccEEEEEEEeCCCCEEEEEEeeC---CCcEEcccccCCCCCCHHHHHHHHHHHHhCCccccee------eeeeee
Q 020742 102 SYKVRVPVTGAIILDETYERCILVKGWK---GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLL------NKDEFI 172 (322)
Q Consensus 102 ~y~~~v~v~g~Iv~~~~~~kvLLvrr~~---~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~------~~~~~~ 172 (322)
.|.+...+++++|.++ ++|||++|.. .|.|+||||+++.||++++||+||++||||+++.... ....+.
T Consensus 203 ~~~~~~~~v~~vv~~~--~~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~~~~~~~~~~~~~~ 280 (352)
T 2qjt_B 203 PFKPNFVTVDALVIVN--DHILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNINLTHEQLAIAKRCEKVFD 280 (352)
T ss_dssp SSCCEEEEEEEEEEET--TEEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCCHHHHHHHEEEEEEEC
T ss_pred CCCCCceEEEEEEEEC--CEEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCcccchhcceeeeeEEec
Confidence 3455566777777765 4999999976 4899999999999999999999999999999987421 112222
Q ss_pred ecc---cCeEEEEEEEEEeecCCCCCCCCCccceeeEEEEec-cccccc
Q 020742 173 EKI---FGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRL-DELQPA 217 (322)
Q Consensus 173 ~~~---~~~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~l-deL~~~ 217 (322)
... .......+|++....+.........+|+.++.|+++ ++++++
T Consensus 281 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~~ 329 (352)
T 2qjt_B 281 YPDRSVRGRTISHVGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKNI 329 (352)
T ss_dssp CTTSCTTSEEEEEEEEEEECSCSSCCCCCCCTTEEEEEEEESSHHHHHT
T ss_pred CCCCCCCccEEEEEEEEEEeCCCCCCccCCCccceEEEEecHHHHHHhh
Confidence 111 122355566665433221122334689999999999 999874
No 66
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.60 E-value=8.4e-16 Score=139.18 Aligned_cols=106 Identities=15% Similarity=0.220 Sum_probs=75.3
Q ss_pred cEEEEEEE--eCCCCEEEEEEeeC---CCcEEcccccCCC--CCCHHHHHHHHHHHHhCCcccceeeeeeeeecc---cC
Q 020742 108 PVTGAIIL--DETYERCILVKGWK---GSSWSFPRGKKNK--DEEDHACAIREVQEETGFDVSKLLNKDEFIEKI---FG 177 (322)
Q Consensus 108 ~v~g~Iv~--~~~~~kvLLvrr~~---~~~w~fPgG~ie~--gEs~~eaA~REv~EETGl~v~~l~~~~~~~~~~---~~ 177 (322)
.++++||+ +++.++|||++|.. .|.|.+|||+++. |||+.+||+||++||||+++..+..+..+.... ..
T Consensus 23 v~v~~vi~~~~~~~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~~~~l~~~~~~~r~~~~ 102 (240)
T 3gz5_A 23 LTVDAVLFTYHDQQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPYIEQLCTVGNNSRDARG 102 (240)
T ss_dssp EEEEEEEEEEETTEEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCSEEEEEEEEEESSSSTTS
T ss_pred cEEEEEEEEEeCCCcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCCCceeeEEEeCCCccCCCc
Confidence 34455554 44445999999876 6899999999999 999999999999999999998776666654422 22
Q ss_pred eEEEEEEEEEeecCCCCCCCCCccceeeEEEEecccccc
Q 020742 178 QQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQP 216 (322)
Q Consensus 178 ~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~ 216 (322)
......|++. +.... . ....+|+.++.|+++++++.
T Consensus 103 ~~~~~~y~a~-~~~~~-~-~~~~~e~~~~~W~~~~el~~ 138 (240)
T 3gz5_A 103 WSVTVCYTAL-MSYQA-C-QIQIASVSDVKWWPLADVLQ 138 (240)
T ss_dssp CEEEEEEEEE-CCHHH-H-HHHHTTCTTEEEEEHHHHTT
T ss_pred eEEEEEEEEE-ecccc-c-CCCCCcccceEEecHHHccc
Confidence 3344445443 33211 1 11346788999999999974
No 67
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.59 E-value=4.4e-15 Score=139.84 Aligned_cols=112 Identities=19% Similarity=0.220 Sum_probs=74.1
Q ss_pred CcccccEEEEEEEeCCCCEEEEEEeeC---CCcEEcccccCCCCCCHHHHHHHHHHHHhCCcccceee------eeeeee
Q 020742 103 YKVRVPVTGAIILDETYERCILVKGWK---GSSWSFPRGKKNKDEEDHACAIREVQEETGFDVSKLLN------KDEFIE 173 (322)
Q Consensus 103 y~~~v~v~g~Iv~~~~~~kvLLvrr~~---~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l~~------~~~~~~ 173 (322)
|++...+++++|.++ ++|||++|.. .|.|+||||+++.||++.+||+||++||||+++..... ...+..
T Consensus 199 ~~~~~~~v~~vi~~~--~~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~ 276 (341)
T 2qjo_A 199 YAPTFITTDAVVVQA--GHVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRLKVPLPVLRGSIVDSHVFDA 276 (341)
T ss_dssp SCCCEEEEEEEEEET--TEEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSCHHHHHHTEEEEEEECC
T ss_pred CCCCceEEEEEEEeC--CEEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCccccccccccccceEEEeC
Confidence 344455677777765 3999999976 68999999999999999999999999999999875322 122221
Q ss_pred cc---cCeEEEEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 174 KI---FGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 174 ~~---~~~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
.. .++....+|++....+. .....+.+|+.++.|+++++++++
T Consensus 277 ~~~~~~~~~~~~~f~~~~~~~~-~~~~~~~~e~~~~~W~~~~el~~~ 322 (341)
T 2qjo_A 277 PGRSLRGRTITHAYFIQLPGGE-LPAVKGGDDAQKAWWMSLADLYAQ 322 (341)
T ss_dssp TTSCTTSCEEEEEEEEECCSSS-CCCCC------CEEEEEHHHHHHT
T ss_pred CCCCCCCcEEEEEEEEEecCCC-cCccCCCCceeeEEEeeHHHHhhh
Confidence 11 12344556666543322 112235688999999999999874
No 68
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.57 E-value=1.7e-15 Score=134.49 Aligned_cols=102 Identities=19% Similarity=0.196 Sum_probs=68.8
Q ss_pred EEEEEEEeCCCCEEEEEEeeC-C------CcEEc-ccccCCCCCC--H----HHHHHHHHHHHhCCcccceeeeeeeee-
Q 020742 109 VTGAIILDETYERCILVKGWK-G------SSWSF-PRGKKNKDEE--D----HACAIREVQEETGFDVSKLLNKDEFIE- 173 (322)
Q Consensus 109 v~g~Iv~~~~~~kvLLvrr~~-~------~~w~f-PgG~ie~gEs--~----~eaA~REv~EETGl~v~~l~~~~~~~~- 173 (322)
+..+||.++ +++||++|.. + +.|++ ||||||.||+ + .+||+||++||||+++..+..++.+..
T Consensus 70 i~~~II~~~--grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl~v~~~~~ig~~~~~ 147 (211)
T 3e57_A 70 IPYVVIMDG--DRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVDVSLRELEFLGLINSS 147 (211)
T ss_dssp EEEEEEEET--TEEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEECC
T ss_pred EEEEEEEEC--CEEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhCCeeeccEEEEEEecc
Confidence 334566554 3999999965 2 68999 9999999999 4 999999999999998877555544322
Q ss_pred -cccC-eEEEEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 174 -KIFG-QQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 174 -~~~~-~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
...+ .....+|.+..... .+ ...|..++.|+++++|+++
T Consensus 148 ~~~~~~~~l~~~f~~~~~~g----~~-~~~E~~~~~W~~~~eL~~~ 188 (211)
T 3e57_A 148 TTEVSRVHLGALFLGRGKFF----SV-KEKDLFEWELIKLEELEKF 188 (211)
T ss_dssp SSHHHHTEEEEEEEEEEEEE----EE-SCTTTCEEEEEEHHHHHHH
T ss_pred CCCCCeEEEEEEEEEEeCCc----ee-CCCCeEEEEEEEHHHHHHh
Confidence 1112 23334566654422 23 3456788999999999874
No 69
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.49 E-value=2.5e-14 Score=126.91 Aligned_cols=101 Identities=13% Similarity=0.150 Sum_probs=70.7
Q ss_pred EEeCCCCEEEEEEeeCCCcEEcccccCCCCC-CHHHHHHHHHHHHhCCccccee-----eeeeeee-cccCeEEEEEEEE
Q 020742 114 ILDETYERCILVKGWKGSSWSFPRGKKNKDE-EDHACAIREVQEETGFDVSKLL-----NKDEFIE-KIFGQQRVRLYII 186 (322)
Q Consensus 114 v~~~~~~kvLLvrr~~~~~w~fPgG~ie~gE-s~~eaA~REv~EETGl~v~~l~-----~~~~~~~-~~~~~~~~~~y~~ 186 (322)
+.+++ +++||++|. .|.|+||||+++.|| ++.+||+||++||||+.+.... .+..... .. ....+++|.+
T Consensus 51 i~~~~-~~vLl~~r~-~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~~~-~~~~~~~f~~ 127 (212)
T 1u20_A 51 RVPIR-RVLLMMMRF-DGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHP-QKCVTHFYIK 127 (212)
T ss_dssp TEECC-EEEEEEEET-TSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEECTT-SCEEEEEEEE
T ss_pred EEecC-CEEEEEEeC-CCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCccccceeeeeEEEeccccCC-CcEEEEEEEE
Confidence 34555 389999885 699999999999999 9999999999999999987532 2232221 12 3566777776
Q ss_pred EeecCCCC------CC-CCCccceeeEEEEeccccccc
Q 020742 187 AGVRDDTA------FA-PQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 187 ~~~~~~~~------~~-~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
....+... .. .....|+.++.|++++++.+.
T Consensus 128 ~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~~ 165 (212)
T 1u20_A 128 ELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDR 165 (212)
T ss_dssp ECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTTS
T ss_pred EecCCCcccccccccccccCCcceEEEEEEEHHHhhhh
Confidence 54322100 00 123468889999999999763
No 70
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.46 E-value=6.7e-13 Score=123.48 Aligned_cols=97 Identities=13% Similarity=0.165 Sum_probs=64.4
Q ss_pred EEEEEEeeCCCcEEcccccCCCCCCHHHHHHHHHHHHhCCccc-----------ceeeee------eeee---cc-c--C
Q 020742 121 RCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGFDVS-----------KLLNKD------EFIE---KI-F--G 177 (322)
Q Consensus 121 kvLLvrr~~~~~w~fPgG~ie~gEs~~eaA~REv~EETGl~v~-----------~l~~~~------~~~~---~~-~--~ 177 (322)
+|||++|...|.|.||||+|+.||++.+||+||++||||+.+. .+..+. .|.. .. . .
T Consensus 140 ~vLl~~r~~~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~~~~~~~~~~~l~~~l~~l~~~~g~~vy~~~~~dpr~~d~ 219 (292)
T 1q33_A 140 QFVAIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHLVIYKGYVDDPRNTDN 219 (292)
T ss_dssp EEEEEECTTTCSEECCCEECCTTCCHHHHHHHHHHHHHSCGGGSCSSHHHHHHHHHHHHTTTSEEEEEEEECCCTTCCSS
T ss_pred EEEEEEecCCCcEeCCCcccCCCCCHHHHHHHHHHHHhCCccccccccchhhHHHHHHHhhcccceeecccccCCCCCcc
Confidence 7999999878999999999999999999999999999999831 111111 1111 11 1 1
Q ss_pred -eEEEEEEEEEeecCCC--CCCCCCccceeeEEEEeccccccc
Q 020742 178 -QQRVRLYIIAGVRDDT--AFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 178 -~~~~~~y~~~~~~~~~--~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
.....+|.+....+.. .......+|+.++.|+++++++.+
T Consensus 220 ~~~~~~~f~~~~~~g~~~~~~~~~~~~E~~~~~W~~~del~~L 262 (292)
T 1q33_A 220 AWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKLKL 262 (292)
T ss_dssp EEEEEEEEEEEESSSTTTTTCCCCCCTTCSEEEEEECCTTCCC
T ss_pred cEEEEEEEEEEeCCCccccccccCCCCccceEEEEEcccCccc
Confidence 2223344443222211 112345678999999999999864
No 71
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.42 E-value=9e-13 Score=118.90 Aligned_cols=106 Identities=9% Similarity=0.141 Sum_probs=75.4
Q ss_pred ccEEEEEEEeCCCCEEEEEEeeC-----CCcEEcc-cccCCCC------CCH---HHHHHHHHHHHhCCcccc-----ee
Q 020742 107 VPVTGAIILDETYERCILVKGWK-----GSSWSFP-RGKKNKD------EED---HACAIREVQEETGFDVSK-----LL 166 (322)
Q Consensus 107 v~v~g~Iv~~~~~~kvLLvrr~~-----~~~w~fP-gG~ie~g------Es~---~eaA~REv~EETGl~v~~-----l~ 166 (322)
..+++++|++.++ ++||+||.. +|.|++| ||+++.| |++ .+||+||++||||+.+.. +.
T Consensus 59 h~av~v~v~~~~g-~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~~l~ 137 (235)
T 2dho_A 59 HRAFSVFLFNTEN-KLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEIN 137 (235)
T ss_dssp EEEEEEEEECTTC-CEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGGGSE
T ss_pred EEEEEEEEEcCCC-EEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCccccChhhcE
Confidence 4567788888764 999999864 5899999 5999999 884 999999999999998752 34
Q ss_pred eeeeee--ecc----cCeEEEEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 167 NKDEFI--EKI----FGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 167 ~~~~~~--~~~----~~~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
.+..+. ... ..+...++|++.. .. .+.+ +++|+.+++|++++++.++
T Consensus 138 ~l~~~~y~~~~~~~~~~~e~~~vf~~~~-~~--~~~~-~~~Ev~~~~wv~~~el~~~ 190 (235)
T 2dho_A 138 YLTRIHYKAQSDGIWGEHEIDYILLVRM-NV--TLNP-DPNEIKSYCYVSKEELKEL 190 (235)
T ss_dssp EEEEEEEEEECSSSBEEEEEEEEEEEEC-CC--CCCC-CTTTEEEEEEECHHHHHHH
T ss_pred EEEEEEEeccCCCccceeEEEEEEEEEE-CC--CCcC-ChHHEEEEEEEcHHHHHHH
Confidence 444332 111 1133456676653 22 2223 4689999999999999873
No 72
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.40 E-value=1.1e-12 Score=119.13 Aligned_cols=106 Identities=12% Similarity=0.149 Sum_probs=75.6
Q ss_pred ccEEEEEEEeCCCCEEEEEEeeC-----CCcEEccc-ccCCCC------CCH---HHHHHHHHHHHhCCcccc-----ee
Q 020742 107 VPVTGAIILDETYERCILVKGWK-----GSSWSFPR-GKKNKD------EED---HACAIREVQEETGFDVSK-----LL 166 (322)
Q Consensus 107 v~v~g~Iv~~~~~~kvLLvrr~~-----~~~w~fPg-G~ie~g------Es~---~eaA~REv~EETGl~v~~-----l~ 166 (322)
..+++++|++.++ ++||+||.. +|.|++|+ |+++.| |++ .+||+||++||||+.+.. +.
T Consensus 70 h~av~v~v~~~~g-~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~~~v~~~~l~ 148 (246)
T 2pny_A 70 HRAFSVVLFNTKN-RILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIV 148 (246)
T ss_dssp EEEEEEEEECTTC-CEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCTTTCCGGGSE
T ss_pred EEEEEEEEEeCCC-EEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCccccCccccE
Confidence 3567778888764 899999864 68999995 999999 887 999999999999998752 33
Q ss_pred eeeeee--ecc----cCeEEEEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 167 NKDEFI--EKI----FGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 167 ~~~~~~--~~~----~~~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
.+..+. ... ..+...++|++.. .. .+.+ +++|+.+++|++++++.++
T Consensus 149 ~l~~~~y~~~~~~~~~~~e~~~vf~~~~-~~--~~~~-~~~Ev~~~~wv~~eel~~~ 201 (246)
T 2pny_A 149 FMTIYHHKAKSDRIWGEHEICYLLLVRK-NV--TLNP-DPSETKSILYLSQEELWEL 201 (246)
T ss_dssp EEEEEEEEEESSSSBEEEEEEEEEEEEC-CC--CCCC-CTTTEEEEEEECHHHHHHH
T ss_pred EEEEEEEEecCCCceeeeEEEEEEEEEE-CC--CCCC-ChHHeeEEEEEeHHHHHHH
Confidence 444322 111 1133456666643 22 2233 4689999999999999873
No 73
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.36 E-value=7.7e-13 Score=117.98 Aligned_cols=94 Identities=15% Similarity=0.118 Sum_probs=62.5
Q ss_pred EEEEEEeeCCCcEEcccccCCCCC-CHHHHHHHHHHHHhCCcccc--eeeeeeeee-ccc-CeEEEEEEEEEeecCCCC-
Q 020742 121 RCILVKGWKGSSWSFPRGKKNKDE-EDHACAIREVQEETGFDVSK--LLNKDEFIE-KIF-GQQRVRLYIIAGVRDDTA- 194 (322)
Q Consensus 121 kvLLvrr~~~~~w~fPgG~ie~gE-s~~eaA~REv~EETGl~v~~--l~~~~~~~~-~~~-~~~~~~~y~~~~~~~~~~- 194 (322)
++||+.+. .+.|+||||+++.|| ++.+||+||++||||+.+.. +..+..+.. ... ......+| ++.+.....
T Consensus 66 ~~ll~~r~-~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~l~~~~~~~~~~~~~~~~~f-~~~l~~~~~~ 143 (217)
T 2xsq_A 66 AILMQMRF-DGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAAFRVERTDYRSSHVGSGPRVVAHFY-AKRLTLEELL 143 (217)
T ss_dssp EEEEEEET-TSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEECSSSSEEEEEE-EEECCHHHHH
T ss_pred cEEEEEcc-CCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCccceeEEEEEEeecCCCCCeEEEEEE-EEEeccccce
Confidence 46665554 689999999999999 99999999999999998874 322222221 111 23344444 444432111
Q ss_pred ------C-CCCCccceeeEEEEecccccc
Q 020742 195 ------F-APQTKKEISEIAWQRLDELQP 216 (322)
Q Consensus 195 ------~-~~~~~~Ei~~~~Wv~ldeL~~ 216 (322)
. ......|..++.|+|++++.+
T Consensus 144 ~~e~~~~~~~~~~~E~~~v~~vPl~~l~d 172 (217)
T 2xsq_A 144 AVEAGATRAKDHGLEVLGLVRVPLYTLRD 172 (217)
T ss_dssp HHHHHGGGSTTBTTTEEEEEECCCSBCTT
T ss_pred ecccccccccccCCceeeEEEEEHHHhhh
Confidence 0 122356889999999999974
No 74
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.30 E-value=1.7e-11 Score=110.29 Aligned_cols=108 Identities=13% Similarity=0.178 Sum_probs=71.3
Q ss_pred cEEEEEEEeCC-C--CEEEEEEeeC-----CCcEEcccccCCCCCC--------------------HHHHHHHHHHHHhC
Q 020742 108 PVTGAIILDET-Y--ERCILVKGWK-----GSSWSFPRGKKNKDEE--------------------DHACAIREVQEETG 159 (322)
Q Consensus 108 ~v~g~Iv~~~~-~--~kvLLvrr~~-----~~~w~fPgG~ie~gEs--------------------~~eaA~REv~EETG 159 (322)
+.+++|+++++ . .+|||+||.. .|.|.||||+|+.+|+ +..||+||++||||
T Consensus 9 ~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE~G 88 (232)
T 3qsj_A 9 KAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEEIG 88 (232)
T ss_dssp EEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHHHS
T ss_pred ceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHHhC
Confidence 45556655543 2 2899999976 5899999999999887 48999999999999
Q ss_pred Ccccce------------------------------------------eeeeeeeecc-cCeEEEEEEEEEeecCCCCCC
Q 020742 160 FDVSKL------------------------------------------LNKDEFIEKI-FGQQRVRLYIIAGVRDDTAFA 196 (322)
Q Consensus 160 l~v~~l------------------------------------------~~~~~~~~~~-~~~~~~~~y~~~~~~~~~~~~ 196 (322)
+.+..- .....++.+. .....-..|++..++.. ...
T Consensus 89 l~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~arWiTP~~~~rRfdT~FFla~lpq~-~~v 167 (232)
T 3qsj_A 89 WLLAVRDGEGTKMDTPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGRFVTPPTQPVRFDTRFFLCVGQHL-GEP 167 (232)
T ss_dssp CCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEEEECCTTSSSEEEEEEEEEECSSC-CCC
T ss_pred ceeccccccCcccChhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEEEcCCcCCceeEEEEEEEEECCCC-CCC
Confidence 976421 1111222221 22333334444445532 111
Q ss_pred CCCccceeeEEEEecccccc
Q 020742 197 PQTKKEISEIAWQRLDELQP 216 (322)
Q Consensus 197 ~~~~~Ei~~~~Wv~ldeL~~ 216 (322)
..+..|+.++.|++++++.+
T Consensus 168 ~~d~~E~~~~~W~~p~eal~ 187 (232)
T 3qsj_A 168 RLHGAELDAALWTPARDMLT 187 (232)
T ss_dssp CCCSSSEEEEEEEEHHHHHH
T ss_pred CCCCCceEEEEEEcHHHHHH
Confidence 33678999999999999976
No 75
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=99.22 E-value=4.4e-11 Score=104.55 Aligned_cols=67 Identities=21% Similarity=0.319 Sum_probs=58.0
Q ss_pred hhHHHhhhcCCcccccEEEEEEEeCCC-CEEEEEEeeCCCcEEcccccCCCCCCHHHHHHHHHHHHhCC
Q 020742 93 IDDIFKDFTSYKVRVPVTGAIILDETY-ERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEETGF 160 (322)
Q Consensus 93 ~~~~~~~~~~y~~~v~v~g~Iv~~~~~-~kvLLvrr~~~~~w~fPgG~ie~gEs~~eaA~REv~EETGl 160 (322)
+..+..+|.+|..++.|+|+|++++++ .+|||+|+. .+.|.||||+++.||++++|++||+.||+|.
T Consensus 45 ~~rl~~~y~~~g~R~sV~avil~~~~~~phVLLlq~~-~~~f~LPGGkle~gE~~~eaL~REL~EELg~ 112 (208)
T 3bho_A 45 FQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLG-TTFFKLPGGELNPGEDEVEGLKRLMTEILGR 112 (208)
T ss_dssp HHHHHHHHHHHCSEEEEEEEEEEEETTEEEEEEEEEE-TTEEECSEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhhCCceEEEEEEEEcCCCCcEEEEEEcC-CCcEECCCcccCCCCCHHHHHHHHHHHHhCC
Confidence 455566778899999999999987653 379999984 5799999999999999999999999999995
No 76
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.15 E-value=2.8e-10 Score=105.92 Aligned_cols=107 Identities=12% Similarity=0.020 Sum_probs=73.3
Q ss_pred EEEEEEEeCCC--CEEEEEEeeC-----CCcE-EcccccCCCCCCHHHHHHHHHHHHhCCcccce---eeeee--eee--
Q 020742 109 VTGAIILDETY--ERCILVKGWK-----GSSW-SFPRGKKNKDEEDHACAIREVQEETGFDVSKL---LNKDE--FIE-- 173 (322)
Q Consensus 109 v~g~Iv~~~~~--~kvLLvrr~~-----~~~w-~fPgG~ie~gEs~~eaA~REv~EETGl~v~~l---~~~~~--~~~-- 173 (322)
++-+.+++.++ .++||.||.. +|.| .+++|+++.||++.+||+||+.||+|+.+..+ ...+. |..
T Consensus 120 ~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~~~~~~~l~~~g~i~y~~~~ 199 (300)
T 3dup_A 120 GVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEALARQAIPVGAITYCMES 199 (300)
T ss_dssp EEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCCHHHHTTCEEEEEEEEEEEE
T ss_pred EEEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCChhhhhhccccceEEEEEec
Confidence 34445555542 2899999865 7999 58999999999999999999999999987532 22222 211
Q ss_pred -cccCeEEEEEEEEEeecCCCCCCCCCccceeeEEEEeccccccc
Q 020742 174 -KIFGQQRVRLYIIAGVRDDTAFAPQTKKEISEIAWQRLDELQPA 217 (322)
Q Consensus 174 -~~~~~~~~~~y~~~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~ 217 (322)
.+......++|.+. ++.+..+.+ +++|+.++.|++++++.++
T Consensus 200 ~~G~~~E~~~vy~~~-l~~~~~p~~-~~~EV~~~~~v~~~El~~~ 242 (300)
T 3dup_A 200 PAGIKPDTLFLYDLA-LPEDFRPHN-TDGEMADFMLWPAAKVVEA 242 (300)
T ss_dssp TTEEEEEEEEEEEEE-CCTTCCCCC-TTSSEEEEEEEEHHHHHHH
T ss_pred CCCeEEEEEEEEEEE-ecCCCcCCC-CchHhheEEEECHHHHHHH
Confidence 11233445556543 333333333 5789999999999999874
No 77
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=99.13 E-value=1.3e-10 Score=109.40 Aligned_cols=115 Identities=14% Similarity=0.099 Sum_probs=74.0
Q ss_pred cEEEEEEEeCCCCEEEEEEeeCCCcEEcccccCCCCCCHHHHHHHHHHHHh-CCcccceeeeeeeeecccCeEEEEEEEE
Q 020742 108 PVTGAIILDETYERCILVKGWKGSSWSFPRGKKNKDEEDHACAIREVQEET-GFDVSKLLNKDEFIEKIFGQQRVRLYII 186 (322)
Q Consensus 108 ~v~g~Iv~~~~~~kvLLvrr~~~~~w~fPgG~ie~gEs~~eaA~REv~EET-Gl~v~~l~~~~~~~~~~~~~~~~~~y~~ 186 (322)
.++++|+.+++ +|||+ .+.| |.+|||.++. +..++|+||++||| |++++....+..|-.... ++...+|.+
T Consensus 184 ~~vgaii~~~g--~vLL~--~~~G-W~LPG~~~~~--~~~~~a~RE~~EEttGl~v~~~~L~~v~~~~~~-~~~~i~f~~ 255 (321)
T 3rh7_A 184 IRLGAVLEQQG--AVFLA--GNET-LSLPNCTVEG--GDPARTLAAYLEQLTGLNVTIGFLYSVYEDKSD-GRQNIVYHA 255 (321)
T ss_dssp EEEEEEEESSS--CEEEB--CSSE-EBCCEEEESS--SCHHHHHHHHHHHHHSSCEEEEEEEEEEECTTT-CCEEEEEEE
T ss_pred ceEEEEEEECC--EEEEe--eCCC-ccCCcccCCC--ChhHHHHHHHHHHhcCCEEeeceEEEEEEcCCC-ceEEEEEEE
Confidence 35678887763 89999 4467 9999886654 44469999999997 999986433333322222 233335555
Q ss_pred EeecCCCCCCCCCccceeeEEEEecccccccCCCccchhhhhhhhhhhhh-hHHHHHHHHHhcCCCCCC
Q 020742 187 AGVRDDTAFAPQTKKEISEIAWQRLDELQPASDDVISHGVTGLKLYMVAP-FLASLKKWISAHKPSIAP 254 (322)
Q Consensus 187 ~~~~~~~~~~~~~~~Ei~~~~Wv~ldeL~~~~~~~~~~~~~~~~~~~v~p-f~~~L~~wi~~~~~~~~~ 254 (322)
....+. ..+++||++++|+...- ..| .-..|++|+++++...++
T Consensus 256 ~~~~g~----------~~e~~~f~~~elp~~~~--------------~~~~~~~~L~~y~~e~~~g~f~ 300 (321)
T 3rh7_A 256 LASDGA----------PRQGRFLRPAELAAAKF--------------SSSATADIINRFVLESSIGNFG 300 (321)
T ss_dssp EECSSC----------CSSSEEECHHHHTTCEE--------------SSHHHHHHHHHHHHTTSCSSCC
T ss_pred EeCCCC----------eeeeEEECHHHCCCccc--------------CCHHHHHHHHHHHHHhhcCCCC
Confidence 433321 16789999999998521 112 235678899887765443
No 78
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.84 E-value=2.1e-09 Score=93.02 Aligned_cols=94 Identities=10% Similarity=0.028 Sum_probs=58.5
Q ss_pred EEEEEeeCCCcEEcccccCCCCC-CHHHHHHHHHHHHhCC-cccceeeeeeeeecccCeEEEEEEEEEeecCCCC-----
Q 020742 122 CILVKGWKGSSWSFPRGKKNKDE-EDHACAIREVQEETGF-DVSKLLNKDEFIEKIFGQQRVRLYIIAGVRDDTA----- 194 (322)
Q Consensus 122 vLLvrr~~~~~w~fPgG~ie~gE-s~~eaA~REv~EETGl-~v~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~----- 194 (322)
|||..|. +|.|+||||+||.|| |+++|+.||+.||+|+ .+.....+..+..........++|.+....++..
T Consensus 46 iLmQ~R~-~G~weFPGGkVe~gE~t~e~aL~REl~EElg~~~V~~~~y~~s~~~~yp~~V~LHfY~crl~~Ge~~~lE~~ 124 (214)
T 3kvh_A 46 VLMQMRF-DGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCLRLTEADYLSSHLTEGPHRVVAHLYARQLTLEQLHAVEIS 124 (214)
T ss_dssp EEEEEET-TSCEECSEEEECTTTCCHHHHHHHSCCSCC---CCCGGGEEEEEEC----CEEEEEEEEECCHHHHHHHHHH
T ss_pred EEEeeee-CCEEeCCCccCCCCCCCHHHHHHHHHHHhhCCeeeeeeeeEEEEeccCCCEEEEEEEEEEeeCCccchhhhc
Confidence 4444444 799999999999999 9999999999999996 4554333333221111245667777764432210
Q ss_pred -CCCC-CccceeeEEEEecccccc
Q 020742 195 -FAPQ-TKKEISEIAWQRLDELQP 216 (322)
Q Consensus 195 -~~~~-~~~Ei~~~~Wv~ldeL~~ 216 (322)
.... -..|+....-||+-.+.+
T Consensus 125 A~~A~d~G~EvlGlvRVPlytl~D 148 (214)
T 3kvh_A 125 AVHSRDHGLEVLGLVRVPLYTQKD 148 (214)
T ss_dssp HHTSTTBTTTEEEEEEECCCBCTT
T ss_pred ccCCcccCceecceEEeeeEEecc
Confidence 1111 235778888899877754
No 79
>3gcg_B MAP, L0028 (mitochondria associated protein); CDC42, complex, alternative splicing, cell membrane, GTP-binding, lipoprotein, membrane; 2.30A {Escherichia coli}
Probab=23.03 E-value=46 Score=27.66 Aligned_cols=39 Identities=26% Similarity=0.180 Sum_probs=32.9
Q ss_pred HHHhhhhhhhccCChhhhhchHHHHHHHhhhheeeeeCCccC
Q 020742 22 LLDDLCSRFVLNVPQEDQQSFERILFLVEYAHWFYEDNSVEN 63 (322)
Q Consensus 22 ~l~dl~~Rfi~n~p~~~~~~~~rl~f~ie~a~w~y~d~~~~~ 63 (322)
.+|++|.+.-.+++.++. .|||.+||..+=++.|.-..+
T Consensus 59 ~ID~~c~~n~~~Is~e~K---~rIF~~Ie~~~~~~LD~naAQ 97 (172)
T 3gcg_B 59 TLDDYCRSNNSVISKETK---GHIFRAVENALQQPLDMNGAQ 97 (172)
T ss_dssp HHHHHHHHHTCCCCHHHH---HHHHHHHHHHHTCCCCTTCCC
T ss_pred HHHHHHHHcCCcCCHHHH---HHHHHHHHHHhCCccChhhhh
Confidence 469999999999999965 599999999988888865443
Done!