BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020752
(322 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FJW5|TRB2_ARATH Telomere repeat-binding factor 2 OS=Arabidopsis thaliana GN=TRB2
PE=1 SV=1
Length = 299
Score = 249 bits (637), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 180/322 (55%), Positives = 216/322 (67%), Gaps = 33/322 (10%)
Query: 1 MGAPKQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNINVTA 60
MGAPKQKWT EEEAALKAGV KHGTGKWRTILSD EFS IL SRSNVDLKDKWRNI+VTA
Sbjct: 1 MGAPKQKWTPEEEAALKAGVLKHGTGKWRTILSDTEFSLILKSRSNVDLKDKWRNISVTA 60
Query: 61 IWGSRQKAKLALKKTSLTPKLDGRTPVIPKHDGRTPVTPKQDGRTQMTPKHDDNTIALST 120
+WGSR+KAKLALK RTP KQD D+NT
Sbjct: 61 LWGSRKKAKLALK--------------------RTPPGTKQD---------DNNTALTIV 91
Query: 121 APQNDE--VVDAKPLAISSGTMQASGSKEPVARLDKLILEAISNLKEPNGSDRASIASYI 178
A ND+ P G+ + SK + LDK+I EAI+NL+E GSDR SI YI
Sbjct: 92 ALTNDDERAKPTSPGGSGGGSPRTCASKRSITSLDKIIFEAITNLRELRGSDRTSIFLYI 151
Query: 179 EDQYWAPANLRKLLATKLKFLSANGTLIKAKHKYRITPN-TPVSVPKRSPKLLLEGRQKG 237
E+ + P N+++ +A +LK LS+NGTL+K KHKYR + N P +++P+L LEG K
Sbjct: 152 EENFKTPPNMKRHVAVRLKHLSSNGTLVKIKHKYRFSSNFIPAGARQKAPQLFLEGNNKK 211
Query: 238 SP-KAQKKEINILTKSLVDADLSRMRGMTAQEAAAAAAQAIAEAEVAIAEAEEAAREAER 296
P K ++ N LTK VD +L ++GMTAQEAA AAA+A+AEAE AI EAE+AA+EAER
Sbjct: 212 DPTKPEENGANSLTKFRVDGELYMIKGMTAQEAAEAAARAVAEAEFAITEAEQAAKEAER 271
Query: 297 AEAEAEAAQVFAKAAIKALKCR 318
AEAEAEAAQ+FAKAA+KALK R
Sbjct: 272 AEAEAEAAQIFAKAAMKALKFR 293
>sp|Q8VWK4|TRB1_ARATH Telomere repeat-binding factor 1 OS=Arabidopsis thaliana GN=TRB1
PE=1 SV=1
Length = 300
Score = 228 bits (582), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 127/276 (46%), Positives = 175/276 (63%), Gaps = 45/276 (16%)
Query: 1 MGAPKQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNINVTA 60
MGAPKQKWT EEE+ALK+GV KHG GKWRTIL DPEFS +L+ RSNVDLKDKWRN++V A
Sbjct: 1 MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMA 60
Query: 61 I-WGSRQKAKLALKKTSLTPKLDGRTPVIPKHDGRTPVTPKQDGRTQMTPKHDDNTIALS 119
WGSR+K++LA+K RT PK ++N++AL+
Sbjct: 61 NGWGSREKSRLAVK------------------------------RTFSLPKQEENSLALT 90
Query: 120 TAPQND-EVVDAKPLAISSGTMQASGS---KEPVARLDKLILEAISNLKEPNGSDRASIA 175
+ Q+D E VDA +SG +Q S + + P RLD LI+EAI+ LKEP G ++ +I
Sbjct: 91 NSLQSDEENVDA-----TSG-LQVSSNPPPRRPNVRLDSLIMEAIATLKEPGGCNKTTIG 144
Query: 176 SYIEDQYWAPANLRKLLATKLKFLSANGTLIKAKHKYRITPNTPVSVPKRSPKLLLEGRQ 235
+YIEDQY AP + ++LL+TKLK+L++ G L+K K KYRI +TP+S +R + G+Q
Sbjct: 145 AYIEDQYHAPPDFKRLLSTKLKYLTSCGKLVKVKRKYRIPNSTPLSSHRRKGLGVFGGKQ 204
Query: 236 KG----SPKAQKKEINILTKSLVDADLSRMRGMTAQ 267
+ SPK E+N T+S +D +++RM+ M
Sbjct: 205 RTSSLPSPKTDIDEVNFQTRSQIDTEIARMKSMNVH 240
>sp|Q9M2X3|TRB3_ARATH Telomere repeat-binding factor 3 OS=Arabidopsis thaliana GN=TRB3
PE=1 SV=1
Length = 295
Score = 223 bits (568), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 163/323 (50%), Positives = 214/323 (66%), Gaps = 32/323 (9%)
Query: 1 MGAPKQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNINVTA 60
MGAPK KWT EEE ALKAGV KHGTGKWRTILSDP +S IL SRSNVDLKDKWRNI+VTA
Sbjct: 1 MGAPKLKWTPEEETALKAGVLKHGTGKWRTILSDPVYSTILKSRSNVDLKDKWRNISVTA 60
Query: 61 IWGSRQKAKLALKKTSLTPKLDGRTPVIPKHDGRTPVTPKQDGRTQMTPKHDDNTIALST 120
+WGSR+KAKLALK+T L+ + DDN A++
Sbjct: 61 LWGSRKKAKLALKRTPLS-----------------------------GSRQDDNATAITI 91
Query: 121 APQNDEVVDAKPLAISSGTMQASGSKEPVARLDKLILEAISNLKEPNGSDRASIASYIED 180
+ V + + S + P +DK+ILEAI++LK P G D SI YIE+
Sbjct: 92 VSLANGDVGGQQIDAPSPPAGSCEPPRPSTSVDKIILEAITSLKRPFGPDGKSILMYIEE 151
Query: 181 QYWAPANLRKLLATKLKFLSANGTLIKAKHKYRITPNTPV-SVPKRSPKLLLEGRQKGSP 239
+ ++++L+ ++LK+L+ GTL+K KHKYRI+ N +RSP+LLLEG ++ +P
Sbjct: 152 NFKMQPDMKRLVTSRLKYLTNVGTLVKKKHKYRISQNYMAEGEGQRSPQLLLEGNKENTP 211
Query: 240 KAQKKEINILTKSLVDADLSRMRGMTAQEAAAAAAQAIAEAEVAIAEAEEAAREAERAEA 299
K ++ + LTKS V ++ M GMT +EAAAAAA+A+AEAE A+AEAEEAAREA++AEA
Sbjct: 212 KPEENGVKNLTKSQVGGEVMIM-GMTEKEAAAAAARAVAEAEFAMAEAEEAAREADKAEA 270
Query: 300 EAEAAQVFAKAAIKALKCRALHT 322
EAEAA +FAKAA+KA+K R +H+
Sbjct: 271 EAEAAHIFAKAAMKAVKYR-MHS 292
>sp|F4I7L1|TRB4_ARATH Telomere repeat-binding factor 4 OS=Arabidopsis thaliana
GN=At1g17520 PE=2 SV=2
Length = 296
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 152/311 (48%), Gaps = 45/311 (14%)
Query: 1 MGAPKQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNINVT- 59
MG K KWTAEEE AL AGVRKHG GKW+ IL DPE + L SRSN+DLKDKWRN++V
Sbjct: 1 MGNQKLKWTAEEEEALLAGVRKHGPGKWKNILRDPELAEQLSSRSNIDLKDKWRNLSVAP 60
Query: 60 AIWGSRQKAKLALKKTSLTPKLDGRTPVIPKHDGRTPVTPKQDGRTQMTPKHDDNTIALS 119
I GS+ K + TPK+ + VTP G H L
Sbjct: 61 GIQGSKDKIR--------TPKIKAAAFHLAAAAAAAIVTPTHSG-------HSSPVATLP 105
Query: 120 TAPQNDEVVDAKPLAISSGTMQASGSKEPVARLDKLILEAISNLKEPNGSDRASIASYIE 179
+ +D +D S + A P R D +I EA+SNL + NGSD ++I ++IE
Sbjct: 106 RSGSSDLSID------DSFNIVADPKNAP--RYDGMIFEALSNLTDANGSDVSAIFNFIE 157
Query: 180 DQYWAPANLRKLLATKLKFLSANGTLIKAKH------KYRITPNTPVSVPKRSPKLLLEG 233
+ P N R++L+++L+ L+A G L K H Y++ N+ V +R+P +
Sbjct: 158 QRQEVPPNFRRMLSSRLRRLAAQGKLEKVSHLKSTQNFYKMNDNSLV---QRTPHV---A 211
Query: 234 RQKGSPKAQKKEINILTKSLVDADLSRMRGMTAQEAAAAAAQAIAEAEVAIAEAEEAARE 293
R K S +++ N S+ EA+ AA + E E + ++ AA E
Sbjct: 212 RPKESNTKSRQQTNSQGPSI---------SQQIVEASITAAYKLVEVENKLDVSKGAAEE 262
Query: 294 AERAEAEAEAA 304
ER AE A
Sbjct: 263 IERLMKLAEEA 273
>sp|F4IEY4|TRB5_ARATH Telomere repeat-binding factor 5 OS=Arabidopsis thaliana
GN=At1g72740 PE=2 SV=1
Length = 287
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 142/303 (46%), Gaps = 42/303 (13%)
Query: 1 MGAPKQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNINVTA 60
MG K KWTAEEE AL AG+RKHG GKW+ IL DPEF+ L RSN+DLKDKWRN++V
Sbjct: 1 MGNQKLKWTAEEEEALLAGIRKHGPGKWKNILRDPEFADQLIHRSNIDLKDKWRNLSVPP 60
Query: 61 IWGSRQKAKLALKKTSLTPKLDGRTPVIPKHDGRTPVTPKQDGRTQMTPKHDDNTIALST 120
G++ SLT K P K++G TP D N
Sbjct: 61 --GTQ----------SLTNKA-------------RPAKVKEEGD---TPAADANDAVTIP 92
Query: 121 APQNDEVVDAKPLAISSGTMQASGSKEPVARLDKLILEAISNLKEPNGSDRASIASYIED 180
P + S + +K R D +I EA+S L + NGSD +SI +IE
Sbjct: 93 RPIPTIPPPPGRRTLPSELIPDENTKN-APRYDGVIFEALSALADGNGSDVSSIYHFIEP 151
Query: 181 QYWAPANLRKLLATKLKFLSANGTLIKAKHKYRITPNTPVSVPKRSPKLLLEGRQKGSPK 240
++ P N R++L+T+L+ L+A L K I + P G + G PK
Sbjct: 152 RHEVPPNFRRILSTRLRRLAAQSKLEKVSTFKSIQNFYKIPDPS--------GTKIGVPK 203
Query: 241 AQKKEINI-LTKSLVDADLSRMRGMTAQEAAAAAAQAIAEAEVAIAEAEEAAREAERAEA 299
++ + + AD +M +EAA AA + EAE I A+ AA E E+
Sbjct: 204 PKETHTKLRQANNQTSADSQQM----IEEAAITAACKVVEAENKIDVAKLAAEEFEKMTK 259
Query: 300 EAE 302
AE
Sbjct: 260 IAE 262
>sp|P23444|H1_MAIZE Histone H1 OS=Zea mays PE=2 SV=2
Length = 246
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 155 LILEAISNLKEPNGSDRASIASYIEDQYWA--PANLRKLLATKLKFLSANGTLIKAKHKY 212
++ EAI++LKE GS +IA ++ED++ A P N RKLL +LK L A G L K K+ Y
Sbjct: 56 MVSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVKNSY 115
Query: 213 RIT 215
+++
Sbjct: 116 KLS 118
>sp|P27806|H1_WHEAT Histone H1 OS=Triticum aestivum PE=2 SV=2
Length = 238
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 155 LILEAISNLKEPNGSDRASIASYIEDQYWA--PANLRKLLATKLKFLSANGTLIKAKHKY 212
++ EAI+ LKE +GS +I +IED++ A PAN RK+L T++K L A G L K K Y
Sbjct: 61 MVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAGKLTKVKGSY 120
Query: 213 RI 214
++
Sbjct: 121 KL 122
>sp|Q9PU53|TERF2_CHICK Telomeric repeat-binding factor 2 OS=Gallus gallus GN=TERF2 PE=1
SV=2
Length = 718
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 1 MGAPKQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNINVTA 60
G+ KQKWT +E +K GVRK+G G+W+TI F +R++V +KD++R +
Sbjct: 661 YGSKKQKWTVQESEWIKDGVRKYGEGRWKTISEKYPF----QNRTSVQIKDRYRTMKKLG 716
Query: 61 I 61
I
Sbjct: 717 I 717
>sp|P70371|TERF1_MOUSE Telomeric repeat-binding factor 1 OS=Mus musculus GN=Terf1 PE=1
SV=1
Length = 421
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
+Q W EE+ LK GV+K+G G W ILS +F ++R++V LKD+WR +
Sbjct: 367 RQTWLWEEDRILKCGVKKYGEGNWAKILSHYKF----NNRTSVMLKDRWRTM 414
>sp|P40267|H1_SOLPN Histone H1 OS=Solanum pennellii PE=2 SV=1
Length = 202
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 155 LILEAISNLKEPNGSDRASIASYIEDQY--WAPANLRKLLATKLKFLSANGTLIKAKHKY 212
+I EA+ L E GS ++A Y+ED++ PAN RK+L +LK +A G LIK K Y
Sbjct: 55 MIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASY 114
Query: 213 RIT 215
+++
Sbjct: 115 KLS 117
>sp|O55036|TERF1_CRIGR Telomeric repeat-binding factor 1 (Fragment) OS=Cricetulus griseus
GN=TERF1 PE=2 SV=1
Length = 438
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
+Q W EE+ L++GVRK+G G W IL +F+ +R++V LKD+WR +
Sbjct: 380 RQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFN----NRTSVMLKDRWRTM 427
>sp|P54274|TERF1_HUMAN Telomeric repeat-binding factor 1 OS=Homo sapiens GN=TERF1 PE=1
SV=3
Length = 439
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
+Q W EE+ L++GVRK+G G W IL +F+ +R++V LKD+WR +
Sbjct: 380 RQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFN----NRTSVMLKDRWRTM 427
>sp|Q15554|TERF2_HUMAN Telomeric repeat-binding factor 2 OS=Homo sapiens GN=TERF2 PE=1
SV=2
Length = 500
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
KQKWT EE +KAGV+K+G G W I + F +R+ V +KD+WR +
Sbjct: 447 KQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFV----NRTAVMIKDRWRTM 494
>sp|P26569|H12_ARATH Histone H1.2 OS=Arabidopsis thaliana GN=At2g30620 PE=1 SV=1
Length = 273
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 132 PLAISSGTMQASGSKEPVARLDKLILEAISNLKEPNGSDRASIASYIEDQYWA-PANLRK 190
P+ ++ T + + S P +++I +AI LKE GS + +I +IE+++ + P RK
Sbjct: 47 PVKAAAPTKKKTTSSHPT--YEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRK 104
Query: 191 LLATKLKFLSANGTLIKAKHKYRI 214
LL LK L A+ L+K K ++I
Sbjct: 105 LLLVNLKRLVASEKLVKVKASFKI 128
>sp|Q10274|MU152_SCHPO Meiotically up-regulated gene 152 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug152 PE=1 SV=1
Length = 390
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 4 PKQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
P+ KWT +E L G + HG G W+ IL D F +RS DLKD++R I
Sbjct: 54 PRVKWTEKETNDLLRGCQIHGVGNWKKILLDERFH--FTNRSPNDLKDRFRTI 104
>sp|O35144|TERF2_MOUSE Telomeric repeat-binding factor 2 OS=Mus musculus GN=Terf2 PE=1
SV=3
Length = 541
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
KQKWT EE +K GVRK+G G W I F +R+ V +KD+WR +
Sbjct: 488 KQKWTIEESEWVKDGVRKYGEGNWAAISKSYPFV----NRTAVMIKDRWRTM 535
>sp|Q9M347|TRP6_ARATH Telomere repeat-binding protein 6 OS=Arabidopsis thaliana GN=TRP6
PE=1 SV=1
Length = 400
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNINVTAIWGS 64
++ +T E AL V + GTG+WR + S F+ + H R+ VDLKDKW+ + TA +
Sbjct: 315 RRPFTVSEVEALVQAVERLGTGRWRDVKSHA-FNHVNH-RTYVDLKDKWKTLVHTAKISA 372
Query: 65 RQK 67
RQ+
Sbjct: 373 RQR 375
>sp|P52551|MYBB_XENLA Myb-related protein B OS=Xenopus laevis GN=mybl2 PE=2 SV=2
Length = 743
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 6/52 (11%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
K KWT EE+ LKA V+KHG G+W+TI S+ L++R+ + +W +
Sbjct: 31 KVKWTPEEDETLKALVKKHGQGEWKTIASN------LNNRTEQQCQHRWLRV 76
>sp|P08283|H1_PEA Histone H1 OS=Pisum sativum PE=2 SV=1
Length = 265
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 152 LDKLILEAISNLKEPNGSDRASIASYIED-QYWAPANLRKLLATKLKFLSANGTLIKAKH 210
+++I +AI +LKE NGS + +IA +IE+ Q PAN +KLL LK A+G LIK K
Sbjct: 65 YEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPANFKKLLLQNLKKNVASGKLIKVKG 124
Query: 211 KYRIT 215
++++
Sbjct: 125 SFKLS 129
>sp|Q9LL45|TBP1_ORYSJ Telomere-binding protein 1 OS=Oryza sativa subsp. japonica GN=TBP1
PE=1 SV=2
Length = 633
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAI--LHSRSNVDLKDKWRNINVTAIW 62
++ +T E L V GTG+WR D +F A +H R+ VDLKDKW+ + TA
Sbjct: 534 RRPFTVAEVELLVEAVEHLGTGRWR----DVKFRAFENVHHRTYVDLKDKWKTLVHTASI 589
Query: 63 GSRQK 67
+Q+
Sbjct: 590 APQQR 594
>sp|Q9M5W4|H1_EUPES Histone H1 OS=Euphorbia esula PE=2 SV=1
Length = 229
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 155 LILEAISNLKEPNGSDRASIASYIEDQY-WAPANLRKLLATKLKFLSANGTLIKAKHKYR 213
+I +AIS LKE GS + +I ++ED++ P+N RKLL LK L A+G L+K K+ ++
Sbjct: 57 MISDAISTLKERTGSSQYAINKFVEDKHKQLPSNFRKLLLFHLKKLVASGKLVKVKNSFK 116
>sp|Q8WML3|KAT6B_MACFA Histone acetyltransferase KAT6B OS=Macaca fascicularis GN=KAT6B
PE=2 SV=1
Length = 1784
Score = 38.9 bits (89), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 18/129 (13%)
Query: 130 AKPLAISSGTMQASGSKEPVARLD--KLILEAISNLKEPNGSDRASIASYIEDQ------ 181
KP T ++ GS + +D KL+ AI L+EPNGS +I Y+ Q
Sbjct: 83 VKPGTFPKSTKESRGSCNDLRNVDWNKLLRRAIEGLEEPNGSSLKNIEKYLRSQSDLTST 142
Query: 182 YWAPANLRKLLATKLKFLSANGTLIKAKHKYRIT---------PNTPVSVPKRSPKLLLE 232
PA ++ L K NG L+K +YR+ P P + P P + L
Sbjct: 143 TNNPA-FQQRLRLGAKRAVNNGRLLKDGPQYRVNYGSLDGKGAPQYPSAFPSSLPPVSLL 201
Query: 233 GRQKGSPKA 241
+K P+A
Sbjct: 202 PHEKDQPRA 210
>sp|P54671|H1_DICDI Histone H1 OS=Dictyostelium discoideum GN=H1 PE=1 SV=3
Length = 180
Score = 38.5 bits (88), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 155 LILEAISNLKEPNGSDRASIASYIEDQY-WAPANLRKLLATKLKFLSANGTLIKAKHKYR 213
+I AI++ K+ GS + +I YIE Y AP + L LK L A GTL K Y+
Sbjct: 30 MISTAIAHYKDRTGSSQPAIIKYIEANYNVAPDTFKTQLKLALKRLVAKGTLTMVKASYK 89
Query: 214 IT 215
++
Sbjct: 90 LS 91
>sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=hrp1 PE=1 SV=1
Length = 1373
Score = 38.1 bits (87), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 8 WTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVD 48
W +E++ L AG+ KHG G W+ I +DP+ LH + +D
Sbjct: 1132 WGIKEDSMLLAGINKHGFGCWQAIKNDPDLG--LHDKIFLD 1170
>sp|Q08864|H11_VOLCA Histone H1-I OS=Volvox carteri GN=H1-I PE=2 SV=3
Length = 261
Score = 38.1 bits (87), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 155 LILEAISNLKEPNGSDRASIASYIEDQYWA---PANLRKLLATKLKFLSANGTLIKAKHK 211
++ +AI+ LKE NGS ++ +IE++Y N K L+ +K G L+K K
Sbjct: 65 MVKDAITTLKERNGSSLPALKKFIENKYGKDIHDKNFAKTLSQVVKTFVKGGKLVKVKGS 124
Query: 212 YRIT 215
++++
Sbjct: 125 FKLS 128
>sp|Q08865|H12_VOLCA Histone H1-II OS=Volvox carteri GN=H1-II PE=2 SV=3
Length = 241
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 155 LILEAISNLKEPNGSDRASIASYIEDQYWAPANLRKL---LATKLKFLSANGTLIKAKHK 211
++ +AI +LKE +GS ++ +IE +Y + +K L+ LK NG L+K K+
Sbjct: 31 MVTDAILSLKERDGSSLPALKKFIEAKYGKDIHDKKFPKTLSLALKTFVKNGKLVKVKNS 90
Query: 212 YRIT 215
Y+++
Sbjct: 91 YKLS 94
>sp|P22035|BAS1_YEAST Myb-like DNA-binding protein BAS1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=BAS1 PE=1 SV=1
Length = 811
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 10/114 (8%)
Query: 6 QKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNINVTAIWGSR 65
++WT EE+ L + V+ +GT KWR I S+ EF R ++ +++WR I + G
Sbjct: 170 REWTLEEDLNLISKVKAYGT-KWRKISSEMEF------RPSLTCRNRWRKIITMVVRGQA 222
Query: 66 QKA-KLALKKTSLTPKLDG--RTPVIPKHDGRTPVTPKQDGRTQMTPKHDDNTI 116
+ A+K+ DG R I D R+ TP ++ + Q++ +++ + I
Sbjct: 223 SEVITKAIKENKNIDMTDGKLRQHPIADSDIRSDSTPNKEEQLQLSQQNNPSLI 276
>sp|Q9FFY9|TRP4_ARATH Telomere repeat-binding protein 4 OS=Arabidopsis thaliana GN=TRP4
PE=1 SV=1
Length = 640
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNINVTAIWGS 64
++ ++ E AL + V + GTG+WR + F H R+ VDLKDKW+ + TA
Sbjct: 535 RRPFSVTEVEALVSAVEEVGTGRWRDV-KLRSFENASH-RTYVDLKDKWKTLVHTASISP 592
Query: 65 RQK 67
+Q+
Sbjct: 593 QQR 595
>sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2
PE=1 SV=2
Length = 1828
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 10/115 (8%)
Query: 7 KWTAEEEAALKAGVRKHGTGKWRTILSDPEF---SAILHSRSNVDLKDKWRNINVTAIWG 63
+W E+++ L G+ +HG G W I +DPE IL + D K + + + A +
Sbjct: 1260 EWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVET--DKKPQGKQLQTRADYL 1317
Query: 64 SRQKAKLALKKTSLT----PKLDGRTPVIPKHDGRTPVTPKQDGRTQMTPKHDDN 114
+ K KK ++T KL R P + K + + P ++ G +P+H DN
Sbjct: 1318 LKLLRKGLEKKGAVTGGEEAKLKKRKPRVKK-ENKVPRLKEEHGIELSSPRHSDN 1371
>sp|Q8BRB7|KAT6B_MOUSE Histone acetyltransferase KAT6B OS=Mus musculus GN=Kat6b PE=2 SV=3
Length = 1872
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 16/104 (15%)
Query: 153 DKLILEAISNLKEPNGSDRASIASYIEDQ------YWAPANLRKLLATKLKFLSANGTLI 206
+KL+ AI L+EPNGS +I Y+ Q PA ++ L K NG L+
Sbjct: 109 NKLLKRAIEGLEEPNGSSLKNIEKYLRSQSDLTGTTNHPA-FQQRLRLGAKRAVNNGRLL 167
Query: 207 KAKHKYRIT---------PNTPVSVPKRSPKLLLEGRQKGSPKA 241
K +YR+ P P + P P + L +K P+A
Sbjct: 168 KEGPQYRVNSGSSDGKGAPQYPSAFPSSLPPVSLLPHEKDQPRA 211
>sp|Q8WYB5|KAT6B_HUMAN Histone acetyltransferase KAT6B OS=Homo sapiens GN=KAT6B PE=1 SV=3
Length = 2073
Score = 36.2 bits (82), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 16/104 (15%)
Query: 153 DKLILEAISNLKEPNGSDRASIASYIEDQ------YWAPANLRKLLATKLKFLSANGTLI 206
+KL+ AI L+EPNGS +I Y+ Q PA ++ L K NG L+
Sbjct: 108 NKLLRRAIEGLEEPNGSSLKNIEKYLRSQSDLTSTTNNPA-FQQRLRLGAKRAVNNGRLL 166
Query: 207 KAKHKYRIT---------PNTPVSVPKRSPKLLLEGRQKGSPKA 241
K +YR+ P P + P P + L +K P+A
Sbjct: 167 KDGPQYRVNYGSLDGKGAPQYPSAFPSSLPPVSLLPHEKDQPRA 210
>sp|Q9SNB9|TRP2_ARATH Telomere repeat-binding protein 2 OS=Arabidopsis thaliana GN=TRP2
PE=1 SV=1
Length = 553
Score = 36.2 bits (82), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNINVTAIWGS 64
++ ++ E AL V K GTG+WR + F H R+ VDLKDKW+ + TA
Sbjct: 453 RRPFSVTEVEALVQAVEKLGTGRWRDVKVR-AFEDADH-RTYVDLKDKWKTLVHTARISP 510
Query: 65 RQK 67
+Q+
Sbjct: 511 QQR 513
>sp|Q9FNV9|MY113_ARATH Transcription factor MYB113 OS=Arabidopsis thaliana GN=MYB113 PE=1
SV=1
Length = 246
Score = 36.2 bits (82), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 26/123 (21%)
Query: 2 GAPKQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNINVTAI 61
G K WT EE+ L+ + K+G GKW + P + + R + L +W N +I
Sbjct: 7 GLRKGTWTTEEDILLRQCIDKYGEGKWHRV---PLRTGLNRCRKSCRL--RWLNYLKPSI 61
Query: 62 WGSRQKAKLALKKTSLTPKLD-----------GRTPVIPKHDGRTPVTPKQDGRTQMTPK 110
++ KL + L +L GR P GRT K T ++ K
Sbjct: 62 ----KRGKLCSDEVDLVLRLHKLLGNRWSLIAGRLP------GRTANDVKNYWNTHLSKK 111
Query: 111 HDD 113
HD+
Sbjct: 112 HDE 114
>sp|Q00423|HMGYA_SOYBN HMG-Y-related protein A OS=Glycine max PE=2 SV=1
Length = 176
Score = 35.8 bits (81), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 155 LILEAISNLKEPNGSDRASIASYIEDQYWAPANLRKLLATKLKFLSANGTLIKAKHKY-R 213
+I++ + L EPNGS++++I+ YIE Y + +L + L + +G L ++ Y +
Sbjct: 18 MIVKTLEALNEPNGSNKSAISKYIETTYGELPDA-TVLGSHLNKMKDSGELSFKQNNYMK 76
Query: 214 ITPNTPVSVPKR 225
PN P PKR
Sbjct: 77 ADPNAP---PKR 85
>sp|Q7XBH4|MYB4_ORYSJ Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4
PE=2 SV=2
Length = 257
Score = 35.8 bits (81), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 1 MGAPKQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
MG K WT EE+ L A +++HG G WR + P+ + +L R + +W N
Sbjct: 10 MGLKKGPWTPEEDKVLVAHIQRHGHGNWRAL---PKQAGLL--RCGKSCRLRWINY 60
>sp|Q75C22|H1_ASHGO Histone H1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=HHOA PE=3 SV=1
Length = 225
Score = 35.8 bits (81), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 148 PVARLDKLILEAISNLKEPNGSDRASIASYIEDQYWAPANL 188
P+ + LI+EA+ +L E GS R +I +I D+Y A
Sbjct: 23 PLPKYKDLIVEAVVSLAERGGSSRQAIKKFIRDKYAVGAKF 63
>sp|P51960|MYBA_MOUSE Myb-related protein A OS=Mus musculus GN=Mybl1 PE=2 SV=2
Length = 751
Score = 35.4 bits (80), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 7 KWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
KWT +E+ LK V +HGT W I S L +RS+ + +W+ +
Sbjct: 37 KWTRDEDDKLKKLVEQHGTDDWTLIASH------LQNRSDFQCQHRWQKV 80
>sp|P01103|MYB_CHICK Transcriptional activator Myb OS=Gallus gallus GN=MYB PE=2 SV=1
Length = 641
Score = 35.4 bits (80), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
K +WT EE+ LK V ++GT W+ I S L +R++V + +W+ +
Sbjct: 40 KTRWTREEDEKLKKLVEQNGTEDWKVIAS------FLPNRTDVQCQHRWQKV 85
>sp|P10243|MYBA_HUMAN Myb-related protein A OS=Homo sapiens GN=MYBL1 PE=1 SV=2
Length = 752
Score = 35.4 bits (80), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 7 KWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
KWT +E+ LK V +HGT W I S L +RS+ + +W+ +
Sbjct: 37 KWTRDEDDKLKKLVEQHGTDDWTLIASH------LQNRSDFQCQHRWQKV 80
>sp|Q6R0E3|TRP5_ARATH Telomere repeat-binding protein 5 OS=Arabidopsis thaliana GN=TRP5
PE=1 SV=2
Length = 630
Score = 35.4 bits (80), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNINVTAIWGS 64
++ ++ E AL V + GTG+WR + F H R+ VDLKDKW+ + TA
Sbjct: 528 RRPFSVAEVEALVQAVERLGTGRWRDVKLR-AFDNAKH-RTYVDLKDKWKTLVHTARISP 585
Query: 65 RQK 67
+Q+
Sbjct: 586 QQR 588
>sp|Q08759|MYB_XENLA Transcriptional activator Myb OS=Xenopus laevis GN=myb PE=2 SV=1
Length = 624
Score = 35.4 bits (80), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
K +WT EE+ LK V ++GT +W+ I ++ L +R++V + +W+ +
Sbjct: 37 KTRWTREEDEKLKKLVEQNGTEEWKVI------ASFLPNRTDVQCQHRWQKV 82
>sp|P15215|LAMC1_DROME Laminin subunit gamma-1 OS=Drosophila melanogaster GN=LanB2 PE=2 SV=2
Length = 1639
Score = 35.4 bits (80), Expect = 0.57, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 13/146 (8%)
Query: 164 KEPNGSDRASIASYIEDQYWAPANLRKLLATKLKFLS-ANGTLIKAKHKY----RITPNT 218
++ +G + A I+D + ++R+ L + KF + ANG + +A+ Y +IT N
Sbjct: 1108 RDNSGDGGQTYAEVIDDLHKHLDSVREHLVSADKFQADANGEIDRARQNYTILDQITENA 1167
Query: 219 PVSVPKRSPKLLLEGRQKGSPKAQKKEINILTKSLVDADLSRMRGMTAQEAAAAAAQAIA 278
+ + L EG Q +A++K + +S +D+SR EA A A + +
Sbjct: 1168 KKELQQALDLLNDEGAQ-ALARAKEKSVEFGQQSEQISDISR-------EARALADKLES 1219
Query: 279 EAEVAIAEAEEAAREAERAEAEAEAA 304
EA+ + A++A E+A A++A
Sbjct: 1220 EAQFDLKNAKDAKDAVEKAHQLAKSA 1245
>sp|Q8L7L8|TRP1_ARATH Telomere repeat-binding protein 1 OS=Arabidopsis thaliana GN=TRP1
PE=1 SV=2
Length = 578
Score = 35.4 bits (80), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 8 WTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNINVTA 60
++ E AL V K GTG+WR + F H R+ VDLKDKW+ + TA
Sbjct: 471 FSVAEVEALVQAVEKLGTGRWRDV-KLCAFEDADH-RTYVDLKDKWKTLVHTA 521
>sp|P81392|MYB06_ANTMA Myb-related protein 306 OS=Antirrhinum majus GN=MYB306 PE=2 SV=1
Length = 316
Score = 35.4 bits (80), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 1 MGAPKQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
+G K WT EE+ L + +++HG G WR I P + +L R + + +W N
Sbjct: 10 IGVKKGPWTPEEDIILVSYIQEHGPGNWRAI---PSNTGLL--RCSKSCRLRWTNY 60
>sp|P22845|H10A_XENLA Histone H1.0-A OS=Xenopus laevis GN=h1f0-a PE=2 SV=3
Length = 194
Score = 35.0 bits (79), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 155 LILEAISNLKEPNGSDRASIASYIEDQYWAPANLRKLLATKLKFLSANGTLIKAK 209
+IL+A+ K +GS R SI YI++ Y N + +K L +GTL + K
Sbjct: 29 MILDAVQAEKSRSGSSRQSIQKYIKNNYTVGENADSQIKLSIKRLVTSGTLKQTK 83
>sp|P37218|H1_SOLLC Histone H1 OS=Solanum lycopersicum PE=3 SV=1
Length = 287
Score = 34.7 bits (78), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 155 LILEAISNLKEPNGSDRASIASYIED-QYWAPANLRKLLATKLKFLSANGTLIKAKHKYR 213
+I +AI LKE GS + +I +IE+ Q P+N +KLL T+LK A+ L+K K+ Y+
Sbjct: 62 MIKDAIVTLKERTGSSQHAITKFIEEKQKSLPSNFKKLLLTQLKKFVASEKLVKVKNSYK 121
Query: 214 I 214
+
Sbjct: 122 L 122
>sp|P10242|MYB_HUMAN Transcriptional activator Myb OS=Homo sapiens GN=MYB PE=1 SV=2
Length = 640
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
K +WT EE+ LK V ++GT W+ I + L +R++V + +W+ +
Sbjct: 40 KTRWTREEDEKLKKLVEQNGTDDWKVI------ANYLPNRTDVQCQHRWQKV 85
>sp|Q9C7B1|TRP3_ARATH Telomere repeat-binding protein 3 OS=Arabidopsis thaliana GN=TRP3
PE=1 SV=1
Length = 619
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNINVTAIWGS 64
++ ++ E AL V + GTG+WR + F H R+ VDLKDKW+ + TA
Sbjct: 509 RRPFSVTEVEALVQAVEELGTGRWRDVKLR-AFEDADH-RTYVDLKDKWKTLVHTASISP 566
Query: 65 RQK 67
+Q+
Sbjct: 567 QQR 569
>sp|P06876|MYB_MOUSE Transcriptional activator Myb OS=Mus musculus GN=Myb PE=1 SV=2
Length = 636
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
K +WT EE+ LK V ++GT W+ I + L +R++V + +W+ +
Sbjct: 40 KTRWTREEDEKLKKLVEQNGTDDWKVI------ANYLPNRTDVQCQHRWQKV 85
>sp|P46200|MYB_BOVIN Transcriptional activator Myb OS=Bos taurus GN=MYB PE=2 SV=1
Length = 640
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 5 KQKWTAEEEAALKAGVRKHGTGKWRTILSDPEFSAILHSRSNVDLKDKWRNI 56
K +WT EE+ LK V ++GT W+ I + L +R++V + +W+ +
Sbjct: 40 KTRWTREEDEKLKKLVEQNGTDDWKVI------ANYLPNRTDVQCQHRWQKV 85
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.124 0.346
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,688,218
Number of Sequences: 539616
Number of extensions: 4631724
Number of successful extensions: 20123
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 341
Number of HSP's that attempted gapping in prelim test: 18241
Number of HSP's gapped (non-prelim): 1595
length of query: 322
length of database: 191,569,459
effective HSP length: 117
effective length of query: 205
effective length of database: 128,434,387
effective search space: 26329049335
effective search space used: 26329049335
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)