BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020755
(322 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P988|NOTUM_HUMAN Protein notum homolog OS=Homo sapiens GN=NOTUM PE=2 SV=2
Length = 496
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 122/266 (45%), Gaps = 25/266 (9%)
Query: 30 EVKMTLVQNASVHGAFCLDGSLPAYHLHRGFGAGARNWLLQFEGGGWCNDIPSCLERAQT 89
++++ L+ N SV C DGS Y+L G+R WLL EGG +C + +C R T
Sbjct: 88 DLRLHLLLNTSV---TCNDGSPAGYYLKES--RGSRRWLLFLEGGWYCFNRENCDSRYDT 142
Query: 90 RRG--STRYMTKYEIFSGILSNNASLNPDFYNWNRVKIRYCDGASFAGNAKFDNGTSSLY 147
R S+R + +GILS+ NP ++N N V I YC ++G A + +
Sbjct: 143 MRRLMSSRDWPRTRTGTGILSSQPEENPYWWNANMVFIPYCSSDVWSG-ASSKSEKNEYA 201
Query: 148 FRGQKIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKYLPN----NASVKC 203
F G I + ++ +LL +GL+ A+ LL+G SAGG L+ D + L V+
Sbjct: 202 FMGALIIQEVVRELLGRGLSGAKVLLLAGSSAGGTGVLLNVDRVAEQLEKLGYPAIQVRG 261
Query: 204 LSDAGFFLDER--------DISLNHTMRSLYKEIVELQGVEQNLDKNCTKSLYIPEL--C 253
L+D+G+FLD + D ++ + I GV + + C + E C
Sbjct: 262 LADSGWFLDNKQYRHTDCVDTITCAPTEAIRRGIRYWNGV---VPERCRRQFQEGEEWNC 318
Query: 254 FFPQYALRYITTPFFILNSAYDVFQF 279
FF + P F++ +D Q
Sbjct: 319 FFGYKVYPTLRCPVFVVQWLFDEAQL 344
>sp|Q8R116|NOTUM_MOUSE Protein notum homolog OS=Mus musculus GN=Notum PE=2 SV=2
Length = 503
Score = 91.3 bits (225), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 128/283 (45%), Gaps = 27/283 (9%)
Query: 30 EVKMTLVQNASVHGAFCLDGSLPAYHLHRGFGAGARNWLLQFEGGGWCNDIPSCLERAQT 89
++++ L+ N SV C DGS Y+L G+R WLL EGG +C + +C R T
Sbjct: 95 DLRLHLLLNTSVT---CNDGSPAGYYLKES--KGSRRWLLFLEGGWYCFNRENCDSRYST 149
Query: 90 RRG--STRYMTKYEIFSGILSNNASLNPDFYNWNRVKIRYCDGASFAGNAKFDNGTSSLY 147
R S++ +GILS+ NP ++N N V I YC ++G A + +
Sbjct: 150 MRRLMSSKDWPHTRTGTGILSSQPEENPHWWNANMVFIPYCSSDVWSG-ASPKSDKNEYA 208
Query: 148 FRGQKIWEAIILDLLPKGLANARKALLSGCSAGGLATFLHCDEFTKYLPN----NASVKC 203
F G I + ++ +LL KGL+ A+ LL+G SAGG L+ D + L + V+
Sbjct: 209 FMGSLIIQEVVRELLGKGLSGAKVLLLAGSSAGGTGVLLNVDRVAELLEELGYPSIQVRG 268
Query: 204 LSDAGFFLDERDISLNHTMRS--------LYKEIVELQGVEQNLDKNCTKSLYIPEL--C 253
L+D+G+FLD + + + + + + I G+ + + C + E C
Sbjct: 269 LADSGWFLDNKQYRRSDCIDTINCAPTDAIRRGIRYWSGM---VPERCQRQFKEGEEWNC 325
Query: 254 FFPQYALRYITTPFFILNSAYDVFQFHHILVPPSADP--RGHW 294
FF + P F++ +D Q V + P G W
Sbjct: 326 FFGYKVYPTLRCPVFVVQWLFDEAQLTVDNVHLTGQPVQEGQW 368
>sp|Q8UD63|LEU1_AGRT5 2-isopropylmalate synthase OS=Agrobacterium tumefaciens (strain C58
/ ATCC 33970) GN=leuA PE=3 SV=2
Length = 558
Score = 35.4 bits (80), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 8/105 (7%)
Query: 132 SFAGNAK--FDNGTSSLYFRGQKIWEAIILDLLPKGLANARKALL---SGCSAGGLATFL 186
+F+G+ + + G ++ +WE L + PK + + +A++ S GG+A L
Sbjct: 331 AFSGSHQDAINKGMKAIKVANHPVWEVPYLPIDPKDVGRSYEAIIRINSQSGKGGIAYIL 390
Query: 187 HCDEFTKYLPNNASVKCLSDAGFFLDERDISLNHTMRSLYKEIVE 231
D + LP N V+ D DE + L + +Y+ +E
Sbjct: 391 QQD-YGINLPRNLQVEFREDIQRITDEEGVEL--PAKRIYERFIE 432
>sp|P29458|MCM4_SCHPO DNA replication licensing factor mcm4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mcm4 PE=1 SV=2
Length = 931
Score = 35.0 bits (79), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 22/153 (14%)
Query: 97 MTKYEIFSGILSNNASLNPDFYNWNRVKIRYCDGASFAGNAKFDNGTSSLYFRGQ----- 151
++K + ILS SL P Y + VK N F G S Y RG
Sbjct: 487 VSKRDDIYDILSR--SLAPSIYEMDDVKKGLLLQLFGGTNKSFHKGASPRY-RGDINILM 543
Query: 152 ----KIWEAIILD----LLPKGLANARKALLSGCSAGGLATFLHCDEFTKYLPNNASVKC 203
++ IL + P+G+ + K G SA GL ++ D+ TK L +
Sbjct: 544 CGDPSTSKSQILKYVHKIAPRGVYTSGK----GSSAVGLTAYITRDQDTKQLVLESGALV 599
Query: 204 LSDAGFF-LDERDISLNHTMRSLYKEIVELQGV 235
LSD G +DE D ++ RS+ E++E Q V
Sbjct: 600 LSDGGICCIDEFD-KMSDATRSILHEVMEQQTV 631
>sp|O74634|SYMM_CANAX Methionine--tRNA ligase, mitochondrial OS=Candida albicans GN=MSM1
PE=3 SV=1
Length = 577
Score = 31.6 bits (70), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Query: 262 YITTPFFILNSAYDVFQFHHILVPPSADPRGHWNRCKLNPA 302
YITTP F +N+A + + +L+ AD R W KLNP+
Sbjct: 21 YITTPIFYVNAAPHIGHLYSMLI---ADTRNKWE--KLNPS 56
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.446
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,988,238
Number of Sequences: 539616
Number of extensions: 5252177
Number of successful extensions: 12009
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 12000
Number of HSP's gapped (non-prelim): 9
length of query: 322
length of database: 191,569,459
effective HSP length: 117
effective length of query: 205
effective length of database: 128,434,387
effective search space: 26329049335
effective search space used: 26329049335
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)